BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14581
(124 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|395536076|ref|XP_003770046.1| PREDICTED: DNA ligase 3 [Sarcophilus harrisii]
Length = 1003
Score = 107 bits (268), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 59/68 (86%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K PVWEI+GAEFS+AE HTADGISIRFPR T+IRDDKDWK+ATNLP+LK L++ S
Sbjct: 771 VPDPKKAPVWEITGAEFSKAEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKKLYQLS 830
Query: 97 KETSDFTL 104
KE +DFT+
Sbjct: 831 KEKADFTV 838
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/34 (85%), Positives = 32/34 (94%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
+SEIKYDGERVQVHKKG++F YFSRSLKPVL HK
Sbjct: 502 FSEIKYDGERVQVHKKGDQFSYFSRSLKPVLPHK 535
>gi|260841228|ref|XP_002613830.1| hypothetical protein BRAFLDRAFT_119901 [Branchiostoma floridae]
gi|229299220|gb|EEN69839.1| hypothetical protein BRAFLDRAFT_119901 [Branchiostoma floridae]
Length = 928
Score = 106 bits (264), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/62 (80%), Positives = 55/62 (88%)
Query: 41 KAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKSKETS 100
K PVWEI+GAEFS++E HTADGISIRFPRVTKIRDDKDWK+ATNL +LK LFK SKETS
Sbjct: 686 KKAPVWEITGAEFSKSEAHTADGISIRFPRVTKIRDDKDWKSATNLKQLKHLFKTSKETS 745
Query: 101 DF 102
D
Sbjct: 746 DI 747
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/35 (82%), Positives = 33/35 (94%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKA 42
Y+EIKYDGERVQVHK+GN+F+YFSRSLKPVL HK
Sbjct: 413 YAEIKYDGERVQVHKQGNKFEYFSRSLKPVLPHKV 447
>gi|405958255|gb|EKC24400.1| DNA ligase 3 [Crassostrea gigas]
Length = 878
Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 47/62 (75%), Positives = 55/62 (88%)
Query: 41 KAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKSKETS 100
K PVWEISGAEFS+A+IHTADGISIRFPR+TK RDDK+W+ AT+LP L+ LFKKSKET+
Sbjct: 611 KKSPVWEISGAEFSKADIHTADGISIRFPRITKFRDDKNWENATDLPRLRTLFKKSKETT 670
Query: 101 DF 102
D
Sbjct: 671 DL 672
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/36 (80%), Positives = 33/36 (91%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQ 43
Y+EIKYDGERVQ+HKKG+ F+YFSRSLKPVL HK Q
Sbjct: 368 YAEIKYDGERVQLHKKGHNFQYFSRSLKPVLPHKVQ 403
>gi|57525295|ref|NP_001006215.1| DNA ligase 3 [Gallus gallus]
gi|53128173|emb|CAG31277.1| hypothetical protein RCJMB04_4j11 [Gallus gallus]
Length = 902
Score = 105 bits (262), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 59/68 (86%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K PVWEI+GAEFS+AE HTADGISIRFPR T+IRDDKDWKTATNLP+LK L++ S
Sbjct: 684 VPDPKKAPVWEITGAEFSKAEAHTADGISIRFPRCTRIRDDKDWKTATNLPQLKELYQLS 743
Query: 97 KETSDFTL 104
KE ++F++
Sbjct: 744 KEKAEFSV 751
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/35 (80%), Positives = 30/35 (85%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKA 42
Y+EIKYDGERVQVHK G+ F YFSRSLKPVL HK
Sbjct: 415 YAEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHKV 449
>gi|344285688|ref|XP_003414592.1| PREDICTED: LOW QUALITY PROTEIN: DNA ligase 3-like [Loxodonta
africana]
Length = 1014
Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 48/73 (65%), Positives = 61/73 (83%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K VWEI+GAEFS++E+HTADGISIRFPR T+IRDDKDWK+ATNLP+LK L++ S
Sbjct: 773 VPDPKKAAVWEITGAEFSKSEVHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLS 832
Query: 97 KETSDFTLKPKYD 109
KE +DFT+ + D
Sbjct: 833 KERADFTVVARDD 845
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/35 (80%), Positives = 30/35 (85%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKA 42
+SEIKYDGERVQVHK G+ F YFSRSLKPVL HK
Sbjct: 504 FSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHKV 538
>gi|334324598|ref|XP_001373823.2| PREDICTED: DNA ligase 3 [Monodelphis domestica]
Length = 1217
Score = 104 bits (260), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 57/68 (83%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K PVWEI+GAEFS+AE HTADGISIRFPR T+IRDDKDWK+ATNLP+LK L+ S
Sbjct: 775 VPDPKKAPVWEITGAEFSKAEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYHLS 834
Query: 97 KETSDFTL 104
KE +DF +
Sbjct: 835 KEKADFMV 842
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/34 (82%), Positives = 31/34 (91%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
+SEIKYDGERVQVHK G++F YFSRSLKPVL HK
Sbjct: 506 FSEIKYDGERVQVHKNGDQFSYFSRSLKPVLPHK 539
>gi|193700124|ref|XP_001943689.1| PREDICTED: DNA ligase 3-like [Acyrthosiphon pisum]
Length = 875
Score = 104 bits (260), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 47/64 (73%), Positives = 58/64 (90%)
Query: 41 KAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKSKETS 100
K PVWEISGAEFSQAE+HTA+GISIRFPRVTKIR+DKDWKTAT+L EL+ L++ SKET+
Sbjct: 656 KKMPVWEISGAEFSQAEVHTANGISIRFPRVTKIRNDKDWKTATSLTELQNLYEASKETN 715
Query: 101 DFTL 104
+ ++
Sbjct: 716 NLSI 719
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 30/35 (85%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKA 42
YSEIKYDGERVQ+HK +FK+FSRSLKPVL HK
Sbjct: 383 YSEIKYDGERVQLHKSETQFKFFSRSLKPVLGHKV 417
>gi|239791831|dbj|BAH72329.1| ACYPI004007 [Acyrthosiphon pisum]
Length = 311
Score = 104 bits (259), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 47/64 (73%), Positives = 58/64 (90%)
Query: 41 KAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKSKETS 100
K PVWEISGAEFSQAE+HTA+GISIRFPRVTKIR+DKDWKTAT+L EL+ L++ SKET+
Sbjct: 92 KKMPVWEISGAEFSQAEVHTANGISIRFPRVTKIRNDKDWKTATSLTELQNLYEASKETN 151
Query: 101 DFTL 104
+ ++
Sbjct: 152 NLSI 155
>gi|196007104|ref|XP_002113418.1| hypothetical protein TRIADDRAFT_57566 [Trichoplax adhaerens]
gi|190583822|gb|EDV23892.1| hypothetical protein TRIADDRAFT_57566 [Trichoplax adhaerens]
Length = 823
Score = 103 bits (258), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/75 (65%), Positives = 57/75 (76%), Gaps = 3/75 (4%)
Query: 32 RSLKP---VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPE 88
RSL P V + K PVWEI+GAEFSQ+ +HTADGISIRFPRVT+IRDDKDW ATNL
Sbjct: 637 RSLVPDFIVTDPKTAPVWEITGAEFSQSTVHTADGISIRFPRVTRIRDDKDWTNATNLDR 696
Query: 89 LKVLFKKSKETSDFT 103
LK L++ SK+ SD
Sbjct: 697 LKTLYENSKDASDIA 711
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 32/38 (84%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPV 45
++EIKYDGERVQ+HK G +F+Y+SRSLK V+ HK + +
Sbjct: 382 FAEIKYDGERVQIHKNGQQFEYYSRSLKQVMPHKVKDI 419
>gi|91076374|ref|XP_967954.1| PREDICTED: similar to rCG33581 [Tribolium castaneum]
gi|270002897|gb|EEZ99344.1| ligase III [Tribolium castaneum]
Length = 853
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/64 (75%), Positives = 57/64 (89%)
Query: 41 KAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKSKETS 100
K QPVWEI+GAEF++ E+HTADGISIRFPRVTKIRDDK W++AT+L ELKVLF KSKE +
Sbjct: 649 KKQPVWEITGAEFTKHEVHTADGISIRFPRVTKIRDDKCWQSATSLKELKVLFAKSKEHT 708
Query: 101 DFTL 104
D +L
Sbjct: 709 DVSL 712
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/35 (88%), Positives = 33/35 (94%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKA 42
YSEIKYDGERVQVHK+G+EFKYFSRSLKPVL HK
Sbjct: 376 YSEIKYDGERVQVHKQGSEFKYFSRSLKPVLPHKV 410
>gi|19550955|gb|AAL91592.1|AF491645_1 ligase III, DNA, ATP-dependent [Homo sapiens]
gi|1113939|gb|AAA85022.1| DNA ligase III [Homo sapiens]
Length = 862
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 58/68 (85%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K VWEI+GAEFS++E HTADGISIRFPR T+IRDDKDWK+ATNLP+LK L++ S
Sbjct: 686 VPDPKKAAVWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLS 745
Query: 97 KETSDFTL 104
KE +DFT+
Sbjct: 746 KEKADFTV 753
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/34 (82%), Positives = 30/34 (88%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
+SEIKYDGERVQVHK G+ F YFSRSLKPVL HK
Sbjct: 417 FSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHK 450
>gi|345489172|ref|XP_001601405.2| PREDICTED: DNA ligase 3 [Nasonia vitripennis]
Length = 1031
Score = 103 bits (257), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 72/106 (67%), Gaps = 6/106 (5%)
Query: 16 ERVQVHKKGNEFKYFSRSLKPVL------EHKAQPVWEISGAEFSQAEIHTADGISIRFP 69
+ +++ K + R+ KP++ + K QPVWEI+GAEF+ +HTADGISIRFP
Sbjct: 659 DMIKIGKDPGLIPRWLRANKPMIPDFVAKDPKKQPVWEITGAEFTNQGVHTADGISIRFP 718
Query: 70 RVTKIRDDKDWKTATNLPELKVLFKKSKETSDFTLKPKYDRIKNLK 115
RVT+IRDDKDW+TATNL EL+ LF +S E+ D++ D ++LK
Sbjct: 719 RVTRIRDDKDWETATNLHELRALFNRSAESVDYSSLLGVDASQDLK 764
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 36/49 (73%)
Query: 9 SEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAE 57
SE+KYDGER+QVHK G++F+Y+SRSLKPVL HK + E F Q +
Sbjct: 418 SEVKYDGERLQVHKMGSDFRYYSRSLKPVLPHKVNFLKEYIPKAFPQGD 466
>gi|296202009|ref|XP_002748408.1| PREDICTED: DNA ligase 3 isoform 2 [Callithrix jacchus]
Length = 954
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 58/68 (85%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K VWEI+GAEFS++E HTADGISIRFPR T+IRDDKDWK+ATNLP+LK L++ S
Sbjct: 773 VPDPKKAAVWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLS 832
Query: 97 KETSDFTL 104
KE +DFT+
Sbjct: 833 KEKADFTV 840
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/34 (82%), Positives = 30/34 (88%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
+SEIKYDGERVQVHK G+ F YFSRSLKPVL HK
Sbjct: 504 FSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHK 537
>gi|348567741|ref|XP_003469657.1| PREDICTED: DNA ligase 3-like isoform 2 [Cavia porcellus]
Length = 939
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 58/68 (85%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K VWEI+GAEFS++E HTADGISIRFPR T+IRDDKDWK+ATNLP+LK L++ S
Sbjct: 772 VPDPKKAAVWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLS 831
Query: 97 KETSDFTL 104
KE +DFT+
Sbjct: 832 KEKADFTV 839
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/34 (82%), Positives = 30/34 (88%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
+SEIKYDGERVQVHK G+ F YFSRSLKPVL HK
Sbjct: 503 FSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHK 536
>gi|348567743|ref|XP_003469658.1| PREDICTED: DNA ligase 3-like isoform 3 [Cavia porcellus]
Length = 951
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 58/68 (85%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K VWEI+GAEFS++E HTADGISIRFPR T+IRDDKDWK+ATNLP+LK L++ S
Sbjct: 772 VPDPKKAAVWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLS 831
Query: 97 KETSDFTL 104
KE +DFT+
Sbjct: 832 KEKADFTV 839
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/34 (82%), Positives = 30/34 (88%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
+SEIKYDGERVQVHK G+ F YFSRSLKPVL HK
Sbjct: 503 FSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHK 536
>gi|73747844|ref|NP_002302.2| DNA ligase 3 isoform beta precursor [Homo sapiens]
gi|119600603|gb|EAW80197.1| ligase III, DNA, ATP-dependent, isoform CRA_a [Homo sapiens]
gi|311346379|gb|ADP89975.1| DNA ligase 3 [Homo sapiens]
gi|311346382|gb|ADP89977.1| DNA ligase 3 [Homo sapiens]
gi|311346385|gb|ADP89979.1| DNA ligase 3 [Homo sapiens]
gi|311346388|gb|ADP89981.1| DNA ligase 3 [Homo sapiens]
gi|311346391|gb|ADP89983.1| DNA ligase 3 [Homo sapiens]
gi|311346394|gb|ADP89985.1| DNA ligase 3 [Homo sapiens]
gi|311346397|gb|ADP89987.1| DNA ligase 3 [Homo sapiens]
gi|311346400|gb|ADP89989.1| DNA ligase 3 [Homo sapiens]
gi|311346403|gb|ADP89991.1| DNA ligase 3 [Homo sapiens]
gi|311346406|gb|ADP89993.1| DNA ligase 3 [Homo sapiens]
gi|311346409|gb|ADP89995.1| DNA ligase 3 [Homo sapiens]
gi|311346412|gb|ADP89997.1| DNA ligase 3 [Homo sapiens]
gi|311346415|gb|ADP89999.1| DNA ligase 3 [Homo sapiens]
gi|311346418|gb|ADP90001.1| DNA ligase 3 [Homo sapiens]
gi|311346421|gb|ADP90003.1| DNA ligase 3 [Homo sapiens]
gi|311346424|gb|ADP90005.1| DNA ligase 3 [Homo sapiens]
gi|311346427|gb|ADP90007.1| DNA ligase 3 [Homo sapiens]
gi|311346430|gb|ADP90009.1| DNA ligase 3 [Homo sapiens]
gi|311346433|gb|ADP90011.1| DNA ligase 3 [Homo sapiens]
gi|311346436|gb|ADP90013.1| DNA ligase 3 [Homo sapiens]
gi|311346439|gb|ADP90015.1| DNA ligase 3 [Homo sapiens]
gi|311346442|gb|ADP90017.1| DNA ligase 3 [Homo sapiens]
gi|311346445|gb|ADP90019.1| DNA ligase 3 [Homo sapiens]
gi|311346448|gb|ADP90021.1| DNA ligase 3 [Homo sapiens]
gi|311346451|gb|ADP90023.1| DNA ligase 3 [Homo sapiens]
gi|311346454|gb|ADP90025.1| DNA ligase 3 [Homo sapiens]
gi|311346457|gb|ADP90027.1| DNA ligase 3 [Homo sapiens]
gi|311346460|gb|ADP90029.1| DNA ligase 3 [Homo sapiens]
gi|311346463|gb|ADP90031.1| DNA ligase 3 [Homo sapiens]
gi|311346466|gb|ADP90033.1| DNA ligase 3 [Homo sapiens]
gi|311346469|gb|ADP90035.1| DNA ligase 3 [Homo sapiens]
gi|311346472|gb|ADP90037.1| DNA ligase 3 [Homo sapiens]
gi|311346475|gb|ADP90039.1| DNA ligase 3 [Homo sapiens]
gi|311346478|gb|ADP90041.1| DNA ligase 3 [Homo sapiens]
gi|311346481|gb|ADP90043.1| DNA ligase 3 [Homo sapiens]
gi|311346484|gb|ADP90045.1| DNA ligase 3 [Homo sapiens]
gi|311346487|gb|ADP90047.1| DNA ligase 3 [Homo sapiens]
gi|311346490|gb|ADP90049.1| DNA ligase 3 [Homo sapiens]
gi|311346493|gb|ADP90051.1| DNA ligase 3 [Homo sapiens]
gi|311346496|gb|ADP90053.1| DNA ligase 3 [Homo sapiens]
Length = 949
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 58/68 (85%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K VWEI+GAEFS++E HTADGISIRFPR T+IRDDKDWK+ATNLP+LK L++ S
Sbjct: 773 VPDPKKAAVWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLS 832
Query: 97 KETSDFTL 104
KE +DFT+
Sbjct: 833 KEKADFTV 840
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/34 (82%), Positives = 30/34 (88%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
+SEIKYDGERVQVHK G+ F YFSRSLKPVL HK
Sbjct: 504 FSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHK 537
>gi|291405585|ref|XP_002719279.1| PREDICTED: DNA ligase (ATP) 3 isoform 3 [Oryctolagus cuniculus]
Length = 952
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 58/68 (85%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K VWEI+GAEFS++E HTADGISIRFPR T+IRDDKDWK+ATNLP+LK L++ S
Sbjct: 775 VPDPKKAAVWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLS 834
Query: 97 KETSDFTL 104
KE +DFT+
Sbjct: 835 KEKADFTV 842
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/34 (82%), Positives = 30/34 (88%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
+SEIKYDGERVQVHK G+ F YFSRSLKPVL HK
Sbjct: 506 FSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHK 539
>gi|426348731|ref|XP_004041981.1| PREDICTED: DNA ligase 3 isoform 2 [Gorilla gorilla gorilla]
Length = 949
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 58/68 (85%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K VWEI+GAEFS++E HTADGISIRFPR T+IRDDKDWK+ATNLP+LK L++ S
Sbjct: 773 VPDPKKAAVWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLS 832
Query: 97 KETSDFTL 104
KE +DFT+
Sbjct: 833 KEKADFTV 840
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/34 (82%), Positives = 30/34 (88%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
+SEIKYDGERVQVHK G+ F YFSRSLKPVL HK
Sbjct: 504 FSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHK 537
>gi|403283359|ref|XP_003933090.1| PREDICTED: DNA ligase 3 isoform 2 [Saimiri boliviensis boliviensis]
Length = 954
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 58/68 (85%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K VWEI+GAEFS++E HTADGISIRFPR T+IRDDKDWK+ATNLP+LK L++ S
Sbjct: 773 VPDPKKAAVWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLS 832
Query: 97 KETSDFTL 104
KE +DFT+
Sbjct: 833 KEKADFTV 840
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/35 (80%), Positives = 30/35 (85%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKA 42
+SEIKYDGERVQVHK G+ F YFSRSLKPVL HK
Sbjct: 504 FSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHKV 538
>gi|351702200|gb|EHB05119.1| DNA ligase 3 [Heterocephalus glaber]
Length = 1013
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 58/68 (85%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K VWEI+GAEFS++E HTADGISIRFPR T+IRDDKDWK+ATNLP+LK L++ S
Sbjct: 774 VPDPKKAAVWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLS 833
Query: 97 KETSDFTL 104
KE +DFT+
Sbjct: 834 KEKADFTI 841
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/34 (82%), Positives = 30/34 (88%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
+SEIKYDGERVQVHK G+ F YFSRSLKPVL HK
Sbjct: 505 FSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHK 538
>gi|297700536|ref|XP_002827303.1| PREDICTED: DNA ligase 3 isoform 3 [Pongo abelii]
Length = 949
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 58/68 (85%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K VWEI+GAEFS++E HTADGISIRFPR T+IRDDKDWK+ATNLP+LK L++ S
Sbjct: 773 VPDPKKAAVWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLS 832
Query: 97 KETSDFTL 104
KE +DFT+
Sbjct: 833 KEKADFTV 840
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/34 (82%), Positives = 30/34 (88%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
+SEIKYDGERVQVHK G+ F YFSRSLKPVL HK
Sbjct: 504 FSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHK 537
>gi|444720955|gb|ELW61715.1| DNA ligase 3 [Tupaia chinensis]
Length = 926
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 58/68 (85%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K VWEI+GAEFS++E HTADGISIRFPR T+IRDDKDWK+ATNLP+LK L++ S
Sbjct: 686 VPDPKKAAVWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLS 745
Query: 97 KETSDFTL 104
KE +DFT+
Sbjct: 746 KEKADFTV 753
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/34 (82%), Positives = 30/34 (88%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
+SEIKYDGERVQVHK G+ F YFSRSLKPVL HK
Sbjct: 417 FSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHK 450
>gi|410259056|gb|JAA17494.1| ligase III, DNA, ATP-dependent [Pan troglodytes]
Length = 949
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 58/68 (85%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K VWEI+GAEFS++E HTADGISIRFPR T+IRDDKDWK+ATNLP+LK L++ S
Sbjct: 773 VPDPKKAAVWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLS 832
Query: 97 KETSDFTL 104
KE +DFT+
Sbjct: 833 KEKADFTV 840
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/34 (82%), Positives = 30/34 (88%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
+SEIKYDGERVQVHK G+ F YFSRSLKPVL HK
Sbjct: 504 FSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHK 537
>gi|332848016|ref|XP_003315567.1| PREDICTED: DNA ligase 3 isoform 1 [Pan troglodytes]
Length = 949
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 58/68 (85%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K VWEI+GAEFS++E HTADGISIRFPR T+IRDDKDWK+ATNLP+LK L++ S
Sbjct: 773 VPDPKKAAVWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLS 832
Query: 97 KETSDFTL 104
KE +DFT+
Sbjct: 833 KEKADFTV 840
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/34 (82%), Positives = 30/34 (88%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
+SEIKYDGERVQVHK G+ F YFSRSLKPVL HK
Sbjct: 504 FSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHK 537
>gi|860963|emb|CAA59230.1| DNA ligase III [Homo sapiens]
Length = 922
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 58/68 (85%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K VWEI+GAEFS++E HTADGISIRFPR T+IRDDKDWK+ATNLP+LK L++ S
Sbjct: 686 VPDPKKAAVWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLS 745
Query: 97 KETSDFTL 104
KE +DFT+
Sbjct: 746 KEKADFTV 753
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/34 (82%), Positives = 30/34 (88%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
+SEIKYDGERVQVHK G+ F YFSRSLKPVL HK
Sbjct: 417 FSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHK 450
>gi|388452388|ref|NP_001252899.1| DNA ligase 3 [Macaca mulatta]
gi|355568415|gb|EHH24696.1| DNA ligase 3 [Macaca mulatta]
gi|380812704|gb|AFE78226.1| DNA ligase 3 isoform alpha precursor [Macaca mulatta]
gi|383418321|gb|AFH32374.1| DNA ligase 3 isoform alpha precursor [Macaca mulatta]
Length = 1009
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 58/68 (85%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K VWEI+GAEFS++E HTADGISIRFPR T+IRDDKDWK+ATNLP+LK L++ S
Sbjct: 773 VPDPKKAAVWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLS 832
Query: 97 KETSDFTL 104
KE +DFT+
Sbjct: 833 KEKADFTV 840
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/34 (82%), Positives = 30/34 (88%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
+SEIKYDGERVQVHK G+ F YFSRSLKPVL HK
Sbjct: 504 FSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHK 537
>gi|402899337|ref|XP_003912656.1| PREDICTED: DNA ligase 3 [Papio anubis]
Length = 1009
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 58/68 (85%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K VWEI+GAEFS++E HTADGISIRFPR T+IRDDKDWK+ATNLP+LK L++ S
Sbjct: 773 VPDPKKAAVWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLS 832
Query: 97 KETSDFTL 104
KE +DFT+
Sbjct: 833 KEKADFTV 840
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/34 (82%), Positives = 30/34 (88%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
+SEIKYDGERVQVHK G+ F YFSRSLKPVL HK
Sbjct: 504 FSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHK 537
>gi|403283357|ref|XP_003933089.1| PREDICTED: DNA ligase 3 isoform 1 [Saimiri boliviensis boliviensis]
Length = 1013
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 58/68 (85%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K VWEI+GAEFS++E HTADGISIRFPR T+IRDDKDWK+ATNLP+LK L++ S
Sbjct: 773 VPDPKKAAVWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLS 832
Query: 97 KETSDFTL 104
KE +DFT+
Sbjct: 833 KEKADFTV 840
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/35 (80%), Positives = 30/35 (85%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKA 42
+SEIKYDGERVQVHK G+ F YFSRSLKPVL HK
Sbjct: 504 FSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHKV 538
>gi|410339187|gb|JAA38540.1| ligase III, DNA, ATP-dependent [Pan troglodytes]
Length = 1009
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 58/68 (85%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K VWEI+GAEFS++E HTADGISIRFPR T+IRDDKDWK+ATNLP+LK L++ S
Sbjct: 773 VPDPKKAAVWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLS 832
Query: 97 KETSDFTL 104
KE +DFT+
Sbjct: 833 KEKADFTV 840
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/34 (82%), Positives = 30/34 (88%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
+SEIKYDGERVQVHK G+ F YFSRSLKPVL HK
Sbjct: 504 FSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHK 537
>gi|410259054|gb|JAA17493.1| ligase III, DNA, ATP-dependent [Pan troglodytes]
Length = 1009
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 58/68 (85%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K VWEI+GAEFS++E HTADGISIRFPR T+IRDDKDWK+ATNLP+LK L++ S
Sbjct: 773 VPDPKKAAVWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLS 832
Query: 97 KETSDFTL 104
KE +DFT+
Sbjct: 833 KEKADFTV 840
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/34 (82%), Positives = 30/34 (88%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
+SEIKYDGERVQVHK G+ F YFSRSLKPVL HK
Sbjct: 504 FSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHK 537
>gi|332848014|ref|XP_511409.3| PREDICTED: DNA ligase 3 isoform 2 [Pan troglodytes]
gi|410212976|gb|JAA03707.1| ligase III, DNA, ATP-dependent [Pan troglodytes]
gi|410306904|gb|JAA32052.1| ligase III, DNA, ATP-dependent [Pan troglodytes]
Length = 1009
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 58/68 (85%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K VWEI+GAEFS++E HTADGISIRFPR T+IRDDKDWK+ATNLP+LK L++ S
Sbjct: 773 VPDPKKAAVWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLS 832
Query: 97 KETSDFTL 104
KE +DFT+
Sbjct: 833 KEKADFTV 840
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/34 (82%), Positives = 30/34 (88%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
+SEIKYDGERVQVHK G+ F YFSRSLKPVL HK
Sbjct: 504 FSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHK 537
>gi|426348729|ref|XP_004041980.1| PREDICTED: DNA ligase 3 isoform 1 [Gorilla gorilla gorilla]
Length = 1009
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 58/68 (85%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K VWEI+GAEFS++E HTADGISIRFPR T+IRDDKDWK+ATNLP+LK L++ S
Sbjct: 773 VPDPKKAAVWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLS 832
Query: 97 KETSDFTL 104
KE +DFT+
Sbjct: 833 KEKADFTV 840
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/34 (82%), Positives = 30/34 (88%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
+SEIKYDGERVQVHK G+ F YFSRSLKPVL HK
Sbjct: 504 FSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHK 537
>gi|291405583|ref|XP_002719278.1| PREDICTED: DNA ligase (ATP) 3 isoform 2 [Oryctolagus cuniculus]
Length = 1011
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 58/68 (85%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K VWEI+GAEFS++E HTADGISIRFPR T+IRDDKDWK+ATNLP+LK L++ S
Sbjct: 775 VPDPKKAAVWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLS 834
Query: 97 KETSDFTL 104
KE +DFT+
Sbjct: 835 KEKADFTV 842
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/34 (82%), Positives = 30/34 (88%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
+SEIKYDGERVQVHK G+ F YFSRSLKPVL HK
Sbjct: 506 FSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHK 539
>gi|221043184|dbj|BAH13269.1| unnamed protein product [Homo sapiens]
Length = 738
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 58/68 (85%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K VWEI+GAEFS++E HTADGISIRFPR T+IRDDKDWK+ATNLP+LK L++ S
Sbjct: 502 VPDPKKAAVWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLS 561
Query: 97 KETSDFTL 104
KE +DFT+
Sbjct: 562 KEKADFTV 569
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/34 (82%), Positives = 30/34 (88%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
+SEIKYDGERVQVHK G+ F YFSRSLKPVL HK
Sbjct: 233 FSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHK 266
>gi|395849244|ref|XP_003797241.1| PREDICTED: DNA ligase 3 [Otolemur garnettii]
Length = 1008
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 58/68 (85%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K VWEI+GAEFS++E HTADGISIRFPR T+IRDDKDWK+ATNLP+LK L++ S
Sbjct: 773 VPDPKKAAVWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLS 832
Query: 97 KETSDFTL 104
KE +DFT+
Sbjct: 833 KEKADFTV 840
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/34 (82%), Positives = 30/34 (88%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
+SEIKYDGERVQVHK G+ F YFSRSLKPVL HK
Sbjct: 504 FSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHK 537
>gi|397494352|ref|XP_003818045.1| PREDICTED: DNA ligase 3 [Pan paniscus]
Length = 738
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 58/68 (85%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K VWEI+GAEFS++E HTADGISIRFPR T+IRDDKDWK+ATNLP+LK L++ S
Sbjct: 502 VPDPKKAAVWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLS 561
Query: 97 KETSDFTL 104
KE +DFT+
Sbjct: 562 KEKADFTV 569
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/34 (82%), Positives = 30/34 (88%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
+SEIKYDGERVQVHK G+ F YFSRSLKPVL HK
Sbjct: 233 FSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHK 266
>gi|291405581|ref|XP_002719277.1| PREDICTED: DNA ligase (ATP) 3 isoform 1 [Oryctolagus cuniculus]
Length = 1012
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 58/68 (85%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K VWEI+GAEFS++E HTADGISIRFPR T+IRDDKDWK+ATNLP+LK L++ S
Sbjct: 776 VPDPKKAAVWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLS 835
Query: 97 KETSDFTL 104
KE +DFT+
Sbjct: 836 KEKADFTV 843
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/34 (82%), Positives = 30/34 (88%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
+SEIKYDGERVQVHK G+ F YFSRSLKPVL HK
Sbjct: 507 FSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHK 540
>gi|281341925|gb|EFB17509.1| hypothetical protein PANDA_012829 [Ailuropoda melanoleuca]
Length = 1015
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 58/68 (85%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K VWEI+GAEFS++E HTADGISIRFPR T+IRDDKDWK+ATNLP+LK L++ S
Sbjct: 774 VPDPKKAAVWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLS 833
Query: 97 KETSDFTL 104
KE +DFT+
Sbjct: 834 KERADFTV 841
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/34 (82%), Positives = 30/34 (88%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
+SEIKYDGERVQVHK G+ F YFSRSLKPVL HK
Sbjct: 505 FSEIKYDGERVQVHKNGDRFNYFSRSLKPVLPHK 538
>gi|348567739|ref|XP_003469656.1| PREDICTED: DNA ligase 3-like isoform 1 [Cavia porcellus]
Length = 1010
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 58/68 (85%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K VWEI+GAEFS++E HTADGISIRFPR T+IRDDKDWK+ATNLP+LK L++ S
Sbjct: 772 VPDPKKAAVWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLS 831
Query: 97 KETSDFTL 104
KE +DFT+
Sbjct: 832 KEKADFTV 839
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/34 (82%), Positives = 30/34 (88%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
+SEIKYDGERVQVHK G+ F YFSRSLKPVL HK
Sbjct: 503 FSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHK 536
>gi|297700534|ref|XP_002827302.1| PREDICTED: DNA ligase 3 isoform 2 [Pongo abelii]
Length = 1009
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 58/68 (85%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K VWEI+GAEFS++E HTADGISIRFPR T+IRDDKDWK+ATNLP+LK L++ S
Sbjct: 773 VPDPKKAAVWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLS 832
Query: 97 KETSDFTL 104
KE +DFT+
Sbjct: 833 KEKADFTV 840
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/34 (82%), Positives = 30/34 (88%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
+SEIKYDGERVQVHK G+ F YFSRSLKPVL HK
Sbjct: 504 FSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHK 537
>gi|441677235|ref|XP_003278419.2| PREDICTED: LOW QUALITY PROTEIN: DNA ligase 3 [Nomascus leucogenys]
Length = 1007
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 58/68 (85%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K VWEI+GAEFS++E HTADGISIRFPR T+IRDDKDWK+ATNLP+LK L++ S
Sbjct: 771 VPDPKKAAVWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLS 830
Query: 97 KETSDFTL 104
KE +DFT+
Sbjct: 831 KEKADFTV 838
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/34 (82%), Positives = 30/34 (88%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
+SEIKYDGERVQVHK G+ F YFSRSLKPVL HK
Sbjct: 502 FSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHK 535
>gi|73747829|ref|NP_039269.2| DNA ligase 3 isoform alpha precursor [Homo sapiens]
gi|251757259|sp|P49916.2|DNLI3_HUMAN RecName: Full=DNA ligase 3; AltName: Full=DNA ligase III; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 3
gi|45751619|gb|AAH68005.1| Ligase III, DNA, ATP-dependent [Homo sapiens]
gi|119600605|gb|EAW80199.1| ligase III, DNA, ATP-dependent, isoform CRA_c [Homo sapiens]
gi|311346378|gb|ADP89974.1| DNA ligase 3 [Homo sapiens]
gi|311346381|gb|ADP89976.1| DNA ligase 3 [Homo sapiens]
gi|311346384|gb|ADP89978.1| DNA ligase 3 [Homo sapiens]
gi|311346387|gb|ADP89980.1| DNA ligase 3 [Homo sapiens]
gi|311346390|gb|ADP89982.1| DNA ligase 3 [Homo sapiens]
gi|311346393|gb|ADP89984.1| DNA ligase 3 [Homo sapiens]
gi|311346396|gb|ADP89986.1| DNA ligase 3 [Homo sapiens]
gi|311346399|gb|ADP89988.1| DNA ligase 3 [Homo sapiens]
gi|311346402|gb|ADP89990.1| DNA ligase 3 [Homo sapiens]
gi|311346405|gb|ADP89992.1| DNA ligase 3 [Homo sapiens]
gi|311346408|gb|ADP89994.1| DNA ligase 3 [Homo sapiens]
gi|311346411|gb|ADP89996.1| DNA ligase 3 [Homo sapiens]
gi|311346414|gb|ADP89998.1| DNA ligase 3 [Homo sapiens]
gi|311346417|gb|ADP90000.1| DNA ligase 3 [Homo sapiens]
gi|311346420|gb|ADP90002.1| DNA ligase 3 [Homo sapiens]
gi|311346423|gb|ADP90004.1| DNA ligase 3 [Homo sapiens]
gi|311346426|gb|ADP90006.1| DNA ligase 3 [Homo sapiens]
gi|311346429|gb|ADP90008.1| DNA ligase 3 [Homo sapiens]
gi|311346432|gb|ADP90010.1| DNA ligase 3 [Homo sapiens]
gi|311346435|gb|ADP90012.1| DNA ligase 3 [Homo sapiens]
gi|311346438|gb|ADP90014.1| DNA ligase 3 [Homo sapiens]
gi|311346441|gb|ADP90016.1| DNA ligase 3 [Homo sapiens]
gi|311346444|gb|ADP90018.1| DNA ligase 3 [Homo sapiens]
gi|311346447|gb|ADP90020.1| DNA ligase 3 [Homo sapiens]
gi|311346450|gb|ADP90022.1| DNA ligase 3 [Homo sapiens]
gi|311346453|gb|ADP90024.1| DNA ligase 3 [Homo sapiens]
gi|311346456|gb|ADP90026.1| DNA ligase 3 [Homo sapiens]
gi|311346459|gb|ADP90028.1| DNA ligase 3 [Homo sapiens]
gi|311346462|gb|ADP90030.1| DNA ligase 3 [Homo sapiens]
gi|311346465|gb|ADP90032.1| DNA ligase 3 [Homo sapiens]
gi|311346468|gb|ADP90034.1| DNA ligase 3 [Homo sapiens]
gi|311346471|gb|ADP90036.1| DNA ligase 3 [Homo sapiens]
gi|311346474|gb|ADP90038.1| DNA ligase 3 [Homo sapiens]
gi|311346477|gb|ADP90040.1| DNA ligase 3 [Homo sapiens]
gi|311346480|gb|ADP90042.1| DNA ligase 3 [Homo sapiens]
gi|311346483|gb|ADP90044.1| DNA ligase 3 [Homo sapiens]
gi|311346486|gb|ADP90046.1| DNA ligase 3 [Homo sapiens]
gi|311346489|gb|ADP90048.1| DNA ligase 3 [Homo sapiens]
gi|311346492|gb|ADP90050.1| DNA ligase 3 [Homo sapiens]
gi|311346495|gb|ADP90052.1| DNA ligase 3 [Homo sapiens]
Length = 1009
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 58/68 (85%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K VWEI+GAEFS++E HTADGISIRFPR T+IRDDKDWK+ATNLP+LK L++ S
Sbjct: 773 VPDPKKAAVWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLS 832
Query: 97 KETSDFTL 104
KE +DFT+
Sbjct: 833 KEKADFTV 840
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/34 (82%), Positives = 30/34 (88%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
+SEIKYDGERVQVHK G+ F YFSRSLKPVL HK
Sbjct: 504 FSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHK 537
>gi|301776466|ref|XP_002923661.1| PREDICTED: DNA ligase 3-like [Ailuropoda melanoleuca]
Length = 996
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 58/68 (85%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K VWEI+GAEFS++E HTADGISIRFPR T+IRDDKDWK+ATNLP+LK L++ S
Sbjct: 774 VPDPKKAAVWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLS 833
Query: 97 KETSDFTL 104
KE +DFT+
Sbjct: 834 KERADFTV 841
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/34 (82%), Positives = 30/34 (88%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
+SEIKYDGERVQVHK G+ F YFSRSLKPVL HK
Sbjct: 505 FSEIKYDGERVQVHKNGDRFNYFSRSLKPVLPHK 538
>gi|449479669|ref|XP_004177044.1| PREDICTED: LOW QUALITY PROTEIN: DNA ligase 3 [Taeniopygia guttata]
Length = 896
Score = 102 bits (255), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/68 (69%), Positives = 58/68 (85%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K PVWEI+GAEFS+AE HTADGISIRFPR T+IRDDKDW+TATNL +LK L++ S
Sbjct: 677 VPDPKKAPVWEITGAEFSKAEAHTADGISIRFPRCTRIRDDKDWQTATNLQQLKELYQLS 736
Query: 97 KETSDFTL 104
KE +DF++
Sbjct: 737 KEKADFSV 744
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/35 (80%), Positives = 30/35 (85%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKA 42
Y+EIKYDGERVQVHK G+ F YFSRSLKPVL HK
Sbjct: 408 YAEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHKV 442
>gi|348531984|ref|XP_003453487.1| PREDICTED: DNA ligase 3 [Oreochromis niloticus]
Length = 1012
Score = 102 bits (254), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/59 (76%), Positives = 55/59 (93%)
Query: 44 PVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKSKETSDF 102
PVWEI+GAEFS++E+HTADGISIRFPR+T+IRDDKDWK+ATNL +LK L++ SKE SDF
Sbjct: 784 PVWEITGAEFSKSEMHTADGISIRFPRMTRIRDDKDWKSATNLHQLKELYRISKENSDF 842
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/35 (82%), Positives = 30/35 (85%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKA 42
YSEIKYDGERVQVHK G+ F YFSRSLKPVL HK
Sbjct: 508 YSEIKYDGERVQVHKNGDNFNYFSRSLKPVLPHKV 542
>gi|390365532|ref|XP_786357.3| PREDICTED: DNA ligase 3 [Strongylocentrotus purpuratus]
Length = 974
Score = 102 bits (253), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 57/67 (85%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
+ E K PVWEI GAEF+Q+E HTA GISIRFPRVT+IRDDKD++TAT+LP L+ LFKKS
Sbjct: 788 IREPKKAPVWEIIGAEFTQSETHTAGGISIRFPRVTRIRDDKDFETATDLPRLRTLFKKS 847
Query: 97 KETSDFT 103
KE++D +
Sbjct: 848 KESTDVS 854
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 32/35 (91%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKA 42
Y+EIKYDGERVQ+HK+G+ F+YFSRSLKPVL HK
Sbjct: 520 YAEIKYDGERVQIHKQGDNFQYFSRSLKPVLPHKV 554
>gi|432901473|ref|XP_004076853.1| PREDICTED: DNA ligase 3-like [Oryzias latipes]
Length = 1011
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 45/59 (76%), Positives = 54/59 (91%)
Query: 44 PVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKSKETSDF 102
PVWEI+GAEFS++E+HTADGISIRFPR+T+IRDDKDWKTATNL +L+ LF+ SKE DF
Sbjct: 782 PVWEITGAEFSKSEMHTADGISIRFPRMTRIRDDKDWKTATNLHQLRELFRISKEHCDF 840
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/34 (82%), Positives = 30/34 (88%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
Y+EIKYDGERVQVHK G+ F YFSRSLKPVL HK
Sbjct: 506 YAEIKYDGERVQVHKSGDSFSYFSRSLKPVLPHK 539
>gi|338711026|ref|XP_001501551.3| PREDICTED: DNA ligase 3 [Equus caballus]
Length = 965
Score = 101 bits (251), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 46/68 (67%), Positives = 58/68 (85%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K VWEI+GAEFS++E HTADGISIRFPR T+IR+DKDWK+ATNLP+LK L++ S
Sbjct: 784 VPDPKKAAVWEITGAEFSKSEAHTADGISIRFPRCTRIREDKDWKSATNLPQLKELYQLS 843
Query: 97 KETSDFTL 104
KE +DFT+
Sbjct: 844 KEKADFTV 851
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/34 (82%), Positives = 30/34 (88%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
+SEIKYDGERVQVHK G+ F YFSRSLKPVL HK
Sbjct: 515 FSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHK 548
>gi|354466771|ref|XP_003495846.1| PREDICTED: DNA ligase 3 isoform 3 [Cricetulus griseus]
Length = 955
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 46/68 (67%), Positives = 57/68 (83%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K VWEI+GAEFS++E HTADGISIRFPR T+IRDDKDWK+ATNLP+LK L++ S
Sbjct: 774 VSDPKKAAVWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLS 833
Query: 97 KETSDFTL 104
KE +DF +
Sbjct: 834 KEKADFDV 841
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/34 (85%), Positives = 31/34 (91%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
+SEIKYDGERVQVHKKG+ F YFSRSLKPVL HK
Sbjct: 505 FSEIKYDGERVQVHKKGDHFSYFSRSLKPVLPHK 538
>gi|354466767|ref|XP_003495844.1| PREDICTED: DNA ligase 3 isoform 1 [Cricetulus griseus]
Length = 942
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 46/68 (67%), Positives = 57/68 (83%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K VWEI+GAEFS++E HTADGISIRFPR T+IRDDKDWK+ATNLP+LK L++ S
Sbjct: 774 VSDPKKAAVWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLS 833
Query: 97 KETSDFTL 104
KE +DF +
Sbjct: 834 KEKADFDV 841
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/34 (85%), Positives = 31/34 (91%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
+SEIKYDGERVQVHKKG+ F YFSRSLKPVL HK
Sbjct: 505 FSEIKYDGERVQVHKKGDHFSYFSRSLKPVLPHK 538
>gi|345805757|ref|XP_548265.3| PREDICTED: DNA ligase 3 [Canis lupus familiaris]
Length = 1001
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 46/68 (67%), Positives = 57/68 (83%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K VWEI+GAEFS++E HTADGISIRFPR T+IRDDKDWK+ATNLP+LK L++ S
Sbjct: 774 VPDPKKAAVWEITGAEFSRSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLS 833
Query: 97 KETSDFTL 104
KE +DF +
Sbjct: 834 KEKADFAV 841
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/34 (82%), Positives = 30/34 (88%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
+SEIKYDGERVQVHK G+ F YFSRSLKPVL HK
Sbjct: 505 FSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHK 538
>gi|355753913|gb|EHH57878.1| DNA ligase 3 [Macaca fascicularis]
Length = 1009
Score = 100 bits (250), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 46/68 (67%), Positives = 57/68 (83%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K VWEI+GAEFS++E HTADGISIRFPR T+IRDDKDWK+ATNLP+LK L++ S
Sbjct: 773 VPDPKKAAVWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLS 832
Query: 97 KETSDFTL 104
K +DFT+
Sbjct: 833 KAKADFTV 840
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/34 (82%), Positives = 30/34 (88%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
+SEIKYDGERVQVHK G+ F YFSRSLKPVL HK
Sbjct: 504 FSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHK 537
>gi|383847368|ref|XP_003699326.1| PREDICTED: DNA ligase 3 [Megachile rotundata]
Length = 979
Score = 100 bits (250), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 67/95 (70%), Gaps = 6/95 (6%)
Query: 16 ERVQVHKKGNEFKYFSRSLKPVL------EHKAQPVWEISGAEFSQAEIHTADGISIRFP 69
+ +++ K N+ + R+ KP++ + K QPVWEI+GAEF+ +HTADGISIRFP
Sbjct: 719 DMIKIAKDPNKVPKWLRANKPMIPDFVARDPKKQPVWEITGAEFTNQGVHTADGISIRFP 778
Query: 70 RVTKIRDDKDWKTATNLPELKVLFKKSKETSDFTL 104
RVTKIR DKDW +AT L EL+ LFK S E+ DF+L
Sbjct: 779 RVTKIRRDKDWSSATTLNELRRLFKTSSESIDFSL 813
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/34 (85%), Positives = 32/34 (94%)
Query: 9 SEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKA 42
SE+KYDGERVQVHK+GNEF+YFSRSLKPVL HK
Sbjct: 478 SEVKYDGERVQVHKRGNEFRYFSRSLKPVLPHKV 511
>gi|242008936|ref|XP_002425250.1| DNA ligase, putative [Pediculus humanus corporis]
gi|212508998|gb|EEB12512.1| DNA ligase, putative [Pediculus humanus corporis]
Length = 927
Score = 100 bits (250), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 46/62 (74%), Positives = 54/62 (87%)
Query: 41 KAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKSKETS 100
K PVWEI+GAEF+ ++HTA+GISIRFPRVTKIR DKDW +ATNL ELK LFKKSK+TS
Sbjct: 661 KKMPVWEITGAEFTCNQVHTANGISIRFPRVTKIRSDKDWASATNLSELKKLFKKSKDTS 720
Query: 101 DF 102
+F
Sbjct: 721 NF 722
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 34/42 (80%), Gaps = 4/42 (9%)
Query: 5 ERC----YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKA 42
E+C +SEIKYDGERVQ+HK G+ FKYFSRSLKPVL HK
Sbjct: 381 EKCPNGMFSEIKYDGERVQLHKLGDTFKYFSRSLKPVLAHKV 422
>gi|340371652|ref|XP_003384359.1| PREDICTED: DNA ligase 3 [Amphimedon queenslandica]
Length = 968
Score = 100 bits (250), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 60/79 (75%), Gaps = 3/79 (3%)
Query: 29 YFSRSLKP---VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATN 85
+ ++ L P V + K+ PVWEI+GAEFSQ+ HTA G+SIRFPRVT+IRDDKDW TAT+
Sbjct: 666 HINKGLTPDLVVSDPKSAPVWEITGAEFSQSTNHTAGGVSIRFPRVTRIRDDKDWNTATD 725
Query: 86 LPELKVLFKKSKETSDFTL 104
L LK L++KSKE D TL
Sbjct: 726 LQRLKTLYEKSKENLDITL 744
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/35 (74%), Positives = 30/35 (85%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKA 42
++EIKYDGERVQVHK+G F+YFSRSLKPV HK
Sbjct: 407 FAEIKYDGERVQVHKQGTTFQYFSRSLKPVQGHKV 441
>gi|354466769|ref|XP_003495845.1| PREDICTED: DNA ligase 3 isoform 2 [Cricetulus griseus]
gi|344238283|gb|EGV94386.1| DNA ligase 3 [Cricetulus griseus]
Length = 1014
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/68 (67%), Positives = 57/68 (83%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K VWEI+GAEFS++E HTADGISIRFPR T+IRDDKDWK+ATNLP+LK L++ S
Sbjct: 774 VSDPKKAAVWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLS 833
Query: 97 KETSDFTL 104
KE +DF +
Sbjct: 834 KEKADFDV 841
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/34 (85%), Positives = 31/34 (91%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
+SEIKYDGERVQVHKKG+ F YFSRSLKPVL HK
Sbjct: 505 FSEIKYDGERVQVHKKGDHFSYFSRSLKPVLPHK 538
>gi|410914952|ref|XP_003970951.1| PREDICTED: DNA ligase 3-like [Takifugu rubripes]
Length = 983
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/59 (76%), Positives = 54/59 (91%)
Query: 44 PVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKSKETSDF 102
PVWEI+GAEFS++E+HTADGISIRFPR+T+IRDDKDWKTATNL +LK L++ SKE S F
Sbjct: 761 PVWEITGAEFSKSEMHTADGISIRFPRMTRIRDDKDWKTATNLNQLKELYRISKENSAF 819
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/35 (82%), Positives = 30/35 (85%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKA 42
YSEIKYDGERVQVHK G+ F YFSRSLKPVL HK
Sbjct: 485 YSEIKYDGERVQVHKNGDNFSYFSRSLKPVLPHKV 519
>gi|408440830|ref|NP_001025345.2| DNA ligase 3 [Danio rerio]
Length = 1011
Score = 100 bits (249), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/59 (74%), Positives = 53/59 (89%)
Query: 44 PVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKSKETSDF 102
PVWEI+GAEFS++E+HTADGISIRFPR T++RDDKDWKTATNL +LK L++ SKE DF
Sbjct: 779 PVWEITGAEFSKSEMHTADGISIRFPRCTRMRDDKDWKTATNLQQLKELYRISKENCDF 837
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 30/35 (85%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKA 42
YSEIKYDGERVQVHK GN F YFSRSLKPVL HK
Sbjct: 503 YSEIKYDGERVQVHKNGNHFSYFSRSLKPVLPHKV 537
>gi|410980490|ref|XP_003996610.1| PREDICTED: DNA ligase 3 isoform 1 [Felis catus]
Length = 996
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/68 (67%), Positives = 58/68 (85%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K VWEI+GAEFS++E HTADGISIRFPR T+IRDDKDWK+AT+LP+LK L++ S
Sbjct: 774 VPDPKKAAVWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATDLPKLKELYQLS 833
Query: 97 KETSDFTL 104
KE +DFT+
Sbjct: 834 KERADFTV 841
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/34 (82%), Positives = 30/34 (88%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
+SEIKYDGERVQVHK G+ F YFSRSLKPVL HK
Sbjct: 505 FSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHK 538
>gi|410980492|ref|XP_003996611.1| PREDICTED: DNA ligase 3 isoform 2 [Felis catus]
Length = 1015
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/68 (67%), Positives = 58/68 (85%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K VWEI+GAEFS++E HTADGISIRFPR T+IRDDKDWK+AT+LP+LK L++ S
Sbjct: 774 VPDPKKAAVWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATDLPKLKELYQLS 833
Query: 97 KETSDFTL 104
KE +DFT+
Sbjct: 834 KERADFTV 841
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/34 (82%), Positives = 30/34 (88%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
+SEIKYDGERVQVHK G+ F YFSRSLKPVL HK
Sbjct: 505 FSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHK 538
>gi|410980494|ref|XP_003996612.1| PREDICTED: DNA ligase 3 isoform 3 [Felis catus]
Length = 1022
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/68 (67%), Positives = 58/68 (85%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K VWEI+GAEFS++E HTADGISIRFPR T+IRDDKDWK+AT+LP+LK L++ S
Sbjct: 781 VPDPKKAAVWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATDLPKLKELYQLS 840
Query: 97 KETSDFTL 104
KE +DFT+
Sbjct: 841 KERADFTV 848
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/34 (82%), Positives = 30/34 (88%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
+SEIKYDGERVQVHK G+ F YFSRSLKPVL HK
Sbjct: 512 FSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHK 545
>gi|148683723|gb|EDL15670.1| ligase III, DNA, ATP-dependent, isoform CRA_b [Mus musculus]
Length = 953
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 57/68 (83%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K VWEI+GAEFS++E HTADGISIRFPR T+IRDDKDWK+ATNLP+LK L++ S
Sbjct: 775 VPDPKKAAVWEITGAEFSRSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLS 834
Query: 97 KETSDFTL 104
K+ +DF +
Sbjct: 835 KDKADFAV 842
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/34 (85%), Positives = 31/34 (91%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
+SEIKYDGERVQVHKKG+ F YFSRSLKPVL HK
Sbjct: 506 FSEIKYDGERVQVHKKGDHFSYFSRSLKPVLPHK 539
>gi|1794221|gb|AAC53003.1| DNA ligase III-beta [Mus musculus]
Length = 956
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 57/68 (83%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K VWEI+GAEFS++E HTADGISIRFPR T+IRDDKDWK+ATNLP+LK L++ S
Sbjct: 778 VPDPKKAAVWEITGAEFSRSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLS 837
Query: 97 KETSDFTL 104
K+ +DF +
Sbjct: 838 KDKADFAV 845
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/34 (85%), Positives = 31/34 (91%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
+SEIKYDGERVQVHKKG+ F YFSRSLKPVL HK
Sbjct: 508 FSEIKYDGERVQVHKKGDHFSYFSRSLKPVLPHK 541
>gi|149053629|gb|EDM05446.1| rCG33581, isoform CRA_a [Rattus norvegicus]
Length = 956
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 57/68 (83%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K VWEI+GAEFS++E HTADGISIRFPR T+IRDDKDWK+ATNLP+LK L++ S
Sbjct: 775 VPDPKKAAVWEITGAEFSRSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLS 834
Query: 97 KETSDFTL 104
K+ +DF +
Sbjct: 835 KDKADFAV 842
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/34 (85%), Positives = 31/34 (91%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
+SEIKYDGERVQVHKKG+ F YFSRSLKPVL HK
Sbjct: 506 FSEIKYDGERVQVHKKGDHFSYFSRSLKPVLPHK 539
>gi|58865590|ref|NP_001012011.1| DNA ligase 3 [Rattus norvegicus]
gi|55249814|gb|AAH85959.1| Ligase III, DNA, ATP-dependent [Rattus norvegicus]
Length = 943
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 57/68 (83%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K VWEI+GAEFS++E HTADGISIRFPR T+IRDDKDWK+ATNLP+LK L++ S
Sbjct: 775 VPDPKKAAVWEITGAEFSRSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLS 834
Query: 97 KETSDFTL 104
K+ +DF +
Sbjct: 835 KDKADFAV 842
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/34 (85%), Positives = 31/34 (91%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
+SEIKYDGERVQVHKKG+ F YFSRSLKPVL HK
Sbjct: 506 FSEIKYDGERVQVHKKGDHFSYFSRSLKPVLPHK 539
>gi|332020242|gb|EGI60678.1| DNA ligase 3 [Acromyrmex echinatior]
Length = 775
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/62 (72%), Positives = 51/62 (82%)
Query: 41 KAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKSKETS 100
K QPVWEI+GAEF+ +HTADGISIRFPRVT+IR DKDW TAT L EL+VLFK+ ET
Sbjct: 464 KKQPVWEITGAEFTNQGMHTADGISIRFPRVTRIRHDKDWSTATTLDELRVLFKRKPETV 523
Query: 101 DF 102
DF
Sbjct: 524 DF 525
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/35 (80%), Positives = 31/35 (88%)
Query: 9 SEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQ 43
SE+KYDGERVQVHK GN+F+YFSRSLKPVL HK
Sbjct: 192 SEVKYDGERVQVHKSGNDFRYFSRSLKPVLPHKVN 226
>gi|149053630|gb|EDM05447.1| rCG33581, isoform CRA_b [Rattus norvegicus]
Length = 1015
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 57/68 (83%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K VWEI+GAEFS++E HTADGISIRFPR T+IRDDKDWK+ATNLP+LK L++ S
Sbjct: 775 VPDPKKAAVWEITGAEFSRSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLS 834
Query: 97 KETSDFTL 104
K+ +DF +
Sbjct: 835 KDKADFAV 842
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/34 (85%), Positives = 31/34 (91%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
+SEIKYDGERVQVHKKG+ F YFSRSLKPVL HK
Sbjct: 506 FSEIKYDGERVQVHKKGDHFSYFSRSLKPVLPHK 539
>gi|74151892|dbj|BAE29732.1| unnamed protein product [Mus musculus]
Length = 1011
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 57/68 (83%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K VWEI+GAEFS++E HTADGISIRFPR T+IRDDKDWK+ATNLP+LK L++ S
Sbjct: 774 VPDPKKAAVWEITGAEFSRSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLS 833
Query: 97 KETSDFTL 104
K+ +DF +
Sbjct: 834 KDKADFAV 841
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/34 (85%), Positives = 31/34 (91%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
+SEIKYDGERVQVHKKG+ F YFSRSLKPVL HK
Sbjct: 505 FSEIKYDGERVQVHKKGDHFSYFSRSLKPVLPHK 538
>gi|74217593|dbj|BAE33548.1| unnamed protein product [Mus musculus]
Length = 1011
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 57/68 (83%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K VWEI+GAEFS++E HTADGISIRFPR T+IRDDKDWK+ATNLP+LK L++ S
Sbjct: 774 VPDPKKAAVWEITGAEFSRSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLS 833
Query: 97 KETSDFTL 104
K+ +DF +
Sbjct: 834 KDKADFAV 841
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/34 (82%), Positives = 30/34 (88%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
+SEIKYDGERVQVHKKG+ F FSRSLKPVL HK
Sbjct: 505 FSEIKYDGERVQVHKKGDHFSCFSRSLKPVLPHK 538
>gi|71061470|ref|NP_034846.2| DNA ligase 3 [Mus musculus]
gi|29165722|gb|AAH49240.1| Ligase III, DNA, ATP-dependent [Mus musculus]
gi|53733359|gb|AAH83500.1| Ligase III, DNA, ATP-dependent [Mus musculus]
gi|74138035|dbj|BAE25421.1| unnamed protein product [Mus musculus]
gi|148683722|gb|EDL15669.1| ligase III, DNA, ATP-dependent, isoform CRA_a [Mus musculus]
Length = 1012
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 57/68 (83%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K VWEI+GAEFS++E HTADGISIRFPR T+IRDDKDWK+ATNLP+LK L++ S
Sbjct: 775 VPDPKKAAVWEITGAEFSRSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLS 834
Query: 97 KETSDFTL 104
K+ +DF +
Sbjct: 835 KDKADFAV 842
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/34 (85%), Positives = 31/34 (91%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
+SEIKYDGERVQVHKKG+ F YFSRSLKPVL HK
Sbjct: 506 FSEIKYDGERVQVHKKGDHFSYFSRSLKPVLPHK 539
>gi|341940451|sp|P97386.2|DNLI3_MOUSE RecName: Full=DNA ligase 3; AltName: Full=DNA ligase III; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 3
Length = 1015
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 57/68 (83%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K VWEI+GAEFS++E HTADGISIRFPR T+IRDDKDWK+ATNLP+LK L++ S
Sbjct: 778 VPDPKKAAVWEITGAEFSRSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLS 837
Query: 97 KETSDFTL 104
K+ +DF +
Sbjct: 838 KDKADFAV 845
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/34 (85%), Positives = 31/34 (91%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
+SEIKYDGERVQVHKKG+ F YFSRSLKPVL HK
Sbjct: 509 FSEIKYDGERVQVHKKGDHFSYFSRSLKPVLPHK 542
>gi|1794223|gb|AAC53004.1| DNA ligase III-alpha [Mus musculus]
Length = 1015
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 57/68 (83%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K VWEI+GAEFS++E HTADGISIRFPR T+IRDDKDWK+ATNLP+LK L++ S
Sbjct: 778 VPDPKKAAVWEITGAEFSRSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLS 837
Query: 97 KETSDFTL 104
K+ +DF +
Sbjct: 838 KDKADFAV 845
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/34 (85%), Positives = 31/34 (91%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
+SEIKYDGERVQVHKKG+ F YFSRSLKPVL HK
Sbjct: 508 FSEIKYDGERVQVHKKGDHFSYFSRSLKPVLPHK 541
>gi|357621098|gb|EHJ73055.1| hypothetical protein KGM_05634 [Danaus plexippus]
Length = 917
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/64 (68%), Positives = 55/64 (85%)
Query: 41 KAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKSKETS 100
K QPVWEI+G E ++A +HTADGIS+RFPRVT+IRDDK+W+TATNL ELK L+K SKE +
Sbjct: 659 KKQPVWEITGTELTKANLHTADGISVRFPRVTRIRDDKNWETATNLEELKHLYKASKEKT 718
Query: 101 DFTL 104
D +L
Sbjct: 719 DVSL 722
Score = 68.9 bits (167), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 33/35 (94%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKA 42
+SEIKYDGERVQVHKKGNEFKYFSR+LKPV+ HK
Sbjct: 384 FSEIKYDGERVQVHKKGNEFKYFSRALKPVMAHKV 418
>gi|74142599|dbj|BAE33868.1| unnamed protein product [Mus musculus]
gi|74217610|dbj|BAE33553.1| unnamed protein product [Mus musculus]
Length = 366
Score = 99.8 bits (247), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 57/68 (83%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K VWEI+GAEFS++E HTADGISIRFPR T+IRDDKDWK+ATNLP+LK L++ S
Sbjct: 129 VPDPKKAAVWEITGAEFSRSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLS 188
Query: 97 KETSDFTL 104
K+ +DF +
Sbjct: 189 KDKADFAV 196
>gi|346644723|ref|NP_001231032.1| DNA ligase 3 [Sus scrofa]
Length = 995
Score = 99.4 bits (246), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/68 (67%), Positives = 56/68 (82%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K VWEI+GAEFS++E HTADGISIRFPR T+IRDDKDWK+ATNLP+LK L++ S
Sbjct: 773 VPDPKKAAVWEITGAEFSRSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLS 832
Query: 97 KETSDFTL 104
KE + F L
Sbjct: 833 KERAAFAL 840
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/34 (85%), Positives = 31/34 (91%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
+SEIKYDGERVQVHKKG+ F YFSRSLKPVL HK
Sbjct: 504 FSEIKYDGERVQVHKKGDHFSYFSRSLKPVLPHK 537
>gi|431890909|gb|ELK01788.1| DNA ligase 3 [Pteropus alecto]
Length = 909
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 46/68 (67%), Positives = 57/68 (83%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K VWEI+GAEFS++E HTADGISIRFPR T+IR DKDWK+ATNLP+LK L++ S
Sbjct: 671 VPDPKKAAVWEITGAEFSKSEAHTADGISIRFPRCTRIRHDKDWKSATNLPKLKELYQLS 730
Query: 97 KETSDFTL 104
KE +DFT+
Sbjct: 731 KERADFTV 738
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/35 (80%), Positives = 30/35 (85%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKA 42
+SEIKYDGERVQVHK G+ F YFSRSLKPVL HK
Sbjct: 402 FSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHKV 436
>gi|449670179|ref|XP_004207211.1| PREDICTED: DNA ligase 3-like [Hydra magnipapillata]
Length = 759
Score = 99.0 bits (245), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 60/77 (77%), Gaps = 3/77 (3%)
Query: 31 SRSLKP---VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLP 87
+RSL P ++ K PVWEI+GAEFSQ+ HTA GISIRFPRVTK+R DKDWK+ATNL
Sbjct: 509 NRSLIPDFVAVDPKTSPVWEITGAEFSQSTTHTAAGISIRFPRVTKVRSDKDWKSATNLS 568
Query: 88 ELKVLFKKSKETSDFTL 104
+L+ L+ +SK+T+D L
Sbjct: 569 QLQKLYNESKKTTDVDL 585
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/34 (79%), Positives = 30/34 (88%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
YSEIKYDGERVQVHK GN+F+Y+SRSLK V HK
Sbjct: 249 YSEIKYDGERVQVHKNGNKFEYYSRSLKSVQPHK 282
>gi|322785626|gb|EFZ12281.1| hypothetical protein SINV_12354 [Solenopsis invicta]
Length = 585
Score = 97.4 bits (241), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 42/62 (67%), Positives = 52/62 (83%)
Query: 41 KAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKSKETS 100
K QPVWEI+GAEF+ +HTA+GISIRFPRVT+IRDDKDW TATNL EL+ LF++ E+
Sbjct: 372 KKQPVWEITGAEFTNQGVHTAEGISIRFPRVTRIRDDKDWSTATNLDELRTLFRRKPESV 431
Query: 101 DF 102
+F
Sbjct: 432 NF 433
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 34/49 (69%)
Query: 9 SEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAE 57
SE+KYDGERVQVHK NEF+YFSRSLKPVL HK + G F +
Sbjct: 100 SEVKYDGERVQVHKNENEFRYFSRSLKPVLPHKVNLFKDYIGRAFPDGD 148
>gi|426238631|ref|XP_004013253.1| PREDICTED: DNA ligase 3 [Ovis aries]
Length = 885
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 55/68 (80%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K VWEI+GAEFS++E HTADGISIRFPR T+IRDDKDWK+ATNLP+LK L++ S
Sbjct: 775 VPDPKKAAVWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLS 834
Query: 97 KETSDFTL 104
KE+ L
Sbjct: 835 KESRGGNL 842
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/35 (82%), Positives = 31/35 (88%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKA 42
+SEIKYDGERVQVHKKG+ F YFSRSLKPVL HK
Sbjct: 506 FSEIKYDGERVQVHKKGDHFSYFSRSLKPVLPHKV 540
>gi|84000185|ref|NP_001033196.1| DNA ligase 3 [Bos taurus]
gi|83406113|gb|AAI11208.1| Ligase III, DNA, ATP-dependent [Bos taurus]
Length = 943
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/68 (64%), Positives = 55/68 (80%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K VWEI+GAEFS++E HTADGISIRFPR T+IRDDKDWK+AT LP+LK L++ S
Sbjct: 775 VPDPKKAAVWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATTLPQLKELYQLS 834
Query: 97 KETSDFTL 104
KE + F +
Sbjct: 835 KERAAFAI 842
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/34 (85%), Positives = 31/34 (91%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
+SEIKYDGERVQVHKKG+ F YFSRSLKPVL HK
Sbjct: 506 FSEIKYDGERVQVHKKGDHFSYFSRSLKPVLPHK 539
>gi|296477017|tpg|DAA19132.1| TPA: DNA ligase (ATP) 3 [Bos taurus]
Length = 943
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/68 (64%), Positives = 55/68 (80%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K VWEI+GAEFS++E HTADGISIRFPR T+IRDDKDWK+AT LP+LK L++ S
Sbjct: 775 VPDPKKAAVWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATTLPQLKELYQLS 834
Query: 97 KETSDFTL 104
KE + F +
Sbjct: 835 KERAAFAI 842
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/34 (85%), Positives = 31/34 (91%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
+SEIKYDGERVQVHKKG+ F YFSRSLKPVL HK
Sbjct: 506 FSEIKYDGERVQVHKKGDHFSYFSRSLKPVLPHK 539
>gi|307214733|gb|EFN89653.1| DNA ligase 3 [Harpegnathos saltator]
Length = 1035
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/64 (67%), Positives = 52/64 (81%)
Query: 41 KAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKSKETS 100
K QPVWEI+GAEF+ +HTADGISIRFPRVT+IR DK+W TAT L EL+ LF+K E+
Sbjct: 694 KKQPVWEITGAEFTNQGVHTADGISIRFPRVTRIRHDKNWSTATTLNELRELFRKKPESV 753
Query: 101 DFTL 104
DF+L
Sbjct: 754 DFSL 757
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/36 (77%), Positives = 31/36 (86%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQ 43
SE+KYDGERVQVHK GNEF+YFSRSLKPV+ HK
Sbjct: 421 LSEVKYDGERVQVHKSGNEFRYFSRSLKPVMPHKVN 456
>gi|307184383|gb|EFN70797.1| DNA ligase 3 [Camponotus floridanus]
Length = 925
Score = 96.3 bits (238), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/63 (68%), Positives = 52/63 (82%)
Query: 41 KAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKSKETS 100
K QPVWEI+GAEF+ +HTADGISIRFPRVT+IR DKDW TAT+L EL+ LFKK ++
Sbjct: 684 KKQPVWEITGAEFTNQGVHTADGISIRFPRVTRIRHDKDWSTATSLNELRGLFKKKPDSV 743
Query: 101 DFT 103
DF+
Sbjct: 744 DFS 746
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/35 (80%), Positives = 31/35 (88%)
Query: 9 SEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQ 43
SE+KYDGERVQVHK GN+F+YFSRSLKPVL HK
Sbjct: 412 SEVKYDGERVQVHKSGNDFRYFSRSLKPVLPHKVN 446
>gi|440902828|gb|ELR53569.1| DNA ligase 3 [Bos grunniens mutus]
Length = 1002
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/68 (64%), Positives = 55/68 (80%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K VWEI+GAEFS++E HTADGISIRFPR T+IRDDKDWK+AT LP+LK L++ S
Sbjct: 775 VPDPKKAAVWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATTLPQLKELYQLS 834
Query: 97 KETSDFTL 104
KE + F +
Sbjct: 835 KERAAFAI 842
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/34 (85%), Positives = 31/34 (91%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
+SEIKYDGERVQVHKKG+ F YFSRSLKPVL HK
Sbjct: 506 FSEIKYDGERVQVHKKGDHFSYFSRSLKPVLPHK 539
>gi|443717140|gb|ELU08334.1| hypothetical protein CAPTEDRAFT_213234 [Capitella teleta]
Length = 841
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 47/76 (61%), Positives = 57/76 (75%), Gaps = 3/76 (3%)
Query: 30 FSRSLKP---VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNL 86
+R L P V + K PVWEI+GAEFS+A+IHTA GISIRFPR TK+R+DK WK AT+L
Sbjct: 633 INRQLAPDFVVKDPKKSPVWEITGAEFSKADIHTAGGISIRFPRCTKVRNDKSWKEATDL 692
Query: 87 PELKVLFKKSKETSDF 102
L+ LF+KSKE SD
Sbjct: 693 TRLRELFRKSKEYSDL 708
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/42 (71%), Positives = 35/42 (83%), Gaps = 4/42 (9%)
Query: 6 RC----YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQ 43
RC Y+EIKYDGERVQVHK+G++F+YFSRSLKPVL HK
Sbjct: 368 RCPNGMYAEIKYDGERVQVHKQGSQFQYFSRSLKPVLPHKVN 409
>gi|93003248|tpd|FAA00207.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 859
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 54/67 (80%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K PVWEI+G EF+Q+E HTA+GISIRFPRVTKIR DK+WKTAT+L LK L+ KS
Sbjct: 669 VADPKNAPVWEITGTEFTQSESHTAEGISIRFPRVTKIRRDKNWKTATSLERLKALYLKS 728
Query: 97 KETSDFT 103
KE SD +
Sbjct: 729 KEESDIS 735
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 31/34 (91%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
YSEIKYDGERVQ+H KG +F+++SRSLKPV +HK
Sbjct: 400 YSEIKYDGERVQLHMKGKDFQFYSRSLKPVSDHK 433
>gi|326435431|gb|EGD81001.1| ligase III [Salpingoeca sp. ATCC 50818]
Length = 1246
Score = 95.5 bits (236), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 55/72 (76%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K PVWEI+GAEFS++ H+AD ISIRFPRVTK+RDDKDW+TAT+L ELK L+ S
Sbjct: 840 VPDPKKAPVWEITGAEFSESTSHSADNISIRFPRVTKVRDDKDWQTATSLKELKKLYDTS 899
Query: 97 KETSDFTLKPKY 108
KE +D P +
Sbjct: 900 KERTDIAPAPSF 911
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/34 (76%), Positives = 32/34 (94%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
Y+EIKYDGERVQVHK+G+ F++FSRSLKPV +HK
Sbjct: 571 YAEIKYDGERVQVHKRGDRFEFFSRSLKPVSDHK 604
>gi|198417566|ref|XP_002129234.1| PREDICTED: Zn-finger (NAD(+) ADP-ribosyltransferase)-2 [Ciona
intestinalis]
Length = 854
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 54/67 (80%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K PVWEI+G EF+Q+E HTA+GISIRFPRVTKIR DK+WKTAT+L LK L+ KS
Sbjct: 664 VADPKNAPVWEITGTEFTQSESHTAEGISIRFPRVTKIRRDKNWKTATSLERLKALYLKS 723
Query: 97 KETSDFT 103
KE SD +
Sbjct: 724 KEESDIS 730
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 31/34 (91%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
YSEIKYDGERVQ+H KG +F+++SRSLKPV +HK
Sbjct: 395 YSEIKYDGERVQLHMKGKDFQFYSRSLKPVSDHK 428
>gi|18029884|gb|AAL56553.1|AF393655_1 DNA ligase III isoform beta [Xenopus laevis]
Length = 906
Score = 95.1 bits (235), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 42/68 (61%), Positives = 54/68 (79%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
+ + K P+WEI+GAE+S+AE HTA G+SIRFPR T+ RDDKDWKTAT L +LK L++ S
Sbjct: 735 IQDPKKAPIWEITGAEYSKAEAHTAGGLSIRFPRCTRFRDDKDWKTATTLQQLKELYRLS 794
Query: 97 KETSDFTL 104
KE SDF +
Sbjct: 795 KEKSDFNI 802
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/34 (82%), Positives = 30/34 (88%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
Y+EIKYDGERVQVHK G+ F YFSRSLKPVL HK
Sbjct: 466 YAEIKYDGERVQVHKDGDHFSYFSRSLKPVLPHK 499
>gi|47506906|gb|AAH70993.1| LOC398275 protein [Xenopus laevis]
Length = 933
Score = 94.7 bits (234), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 42/68 (61%), Positives = 54/68 (79%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
+ + K P+WEI+GAE+S+AE HTA G+SIRFPR T+ RDDKDWKTAT L +LK L++ S
Sbjct: 680 IQDPKKAPIWEITGAEYSKAEAHTAGGLSIRFPRCTRFRDDKDWKTATTLQQLKELYRLS 739
Query: 97 KETSDFTL 104
KE SDF +
Sbjct: 740 KEKSDFNI 747
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/34 (82%), Positives = 30/34 (88%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
Y+EIKYDGERVQVHK G+ F YFSRSLKPVL HK
Sbjct: 411 YAEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHK 444
>gi|147901021|ref|NP_001082183.1| ligase III, DNA, ATP-dependent [Xenopus laevis]
gi|18029882|gb|AAL56552.1|AF393654_1 DNA ligase III isoform alpha [Xenopus laevis]
Length = 988
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 42/68 (61%), Positives = 54/68 (79%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
+ + K P+WEI+GAE+S+AE HTA G+SIRFPR T+ RDDKDWKTAT L +LK L++ S
Sbjct: 735 IQDPKKAPIWEITGAEYSKAEAHTAGGLSIRFPRCTRFRDDKDWKTATTLQQLKELYRLS 794
Query: 97 KETSDFTL 104
KE SDF +
Sbjct: 795 KEKSDFNI 802
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/35 (80%), Positives = 30/35 (85%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKA 42
Y+EIKYDGERVQVHK G+ F YFSRSLKPVL HK
Sbjct: 466 YAEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHKV 500
>gi|282165841|ref|NP_001016351.2| DNA ligase (ATP) 3 [Xenopus (Silurana) tropicalis]
gi|195539958|gb|AAI67946.1| Unknown (protein for MGC:136050) [Xenopus (Silurana) tropicalis]
Length = 893
Score = 94.7 bits (234), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 42/64 (65%), Positives = 52/64 (81%)
Query: 41 KAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKSKETS 100
K P+WEI+GAE+S+AE HTA G+SIRFPR T+ RDDKDWKTAT L +LK L++ SKE S
Sbjct: 738 KKAPIWEITGAEYSKAEAHTAAGLSIRFPRCTRFRDDKDWKTATTLQQLKELYRLSKEKS 797
Query: 101 DFTL 104
DF +
Sbjct: 798 DFNI 801
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/35 (80%), Positives = 30/35 (85%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKA 42
Y+EIKYDGERVQVHK G+ F YFSRSLKPVL HK
Sbjct: 465 YAEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHKV 499
>gi|110761354|ref|XP_396537.3| PREDICTED: DNA ligase 3 [Apis mellifera]
Length = 1009
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 64/95 (67%), Gaps = 6/95 (6%)
Query: 16 ERVQVHKKGNEFKYFSRSLKPVL------EHKAQPVWEISGAEFSQAEIHTADGISIRFP 69
+ +++ K + + R+ KP++ + K QPVWEI+GAEF+ +HTADGISIRFP
Sbjct: 661 DMIKIGKNPTKVPRWLRANKPMIPDFVAKDPKKQPVWEITGAEFTNQGVHTADGISIRFP 720
Query: 70 RVTKIRDDKDWKTATNLPELKVLFKKSKETSDFTL 104
RVT+IR DKDW A L EL+ LFKKS ++ D +L
Sbjct: 721 RVTRIRRDKDWSLAITLNELRNLFKKSSQSIDLSL 755
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/35 (82%), Positives = 32/35 (91%)
Query: 9 SEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQ 43
+E+KYDGERVQVHKKGNEF+YFSRSLKPVL HK
Sbjct: 420 AEVKYDGERVQVHKKGNEFRYFSRSLKPVLSHKVN 454
>gi|300508449|pdb|3L2P|A Chain A, Human Dna Ligase Iii Recognizes Dna Ends By Dynamic
Switching Between Two Dna Bound States
Length = 579
Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/61 (70%), Positives = 52/61 (85%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K VWEI+GAEFS++E HTADGISIRFPR T+IRDDKDWK+ATNLP+LK L++ S
Sbjct: 519 VPDPKKAAVWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLS 578
Query: 97 K 97
K
Sbjct: 579 K 579
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/35 (80%), Positives = 30/35 (85%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKA 42
+SEIKYDGERVQVHK G+ F YFSRSLKPVL HK
Sbjct: 250 FSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHKV 284
>gi|393906039|gb|EJD74156.1| DNA ligase [Loa loa]
Length = 840
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/75 (61%), Positives = 59/75 (78%), Gaps = 3/75 (4%)
Query: 31 SRSLKP---VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLP 87
SRSL P V++ K PVWEI+GAEF++++ HTA GISIRFPRV KIRDDK+W+TAT+L
Sbjct: 676 SRSLVPDFIVIDPKESPVWEIAGAEFTRSDNHTASGISIRFPRVIKIRDDKNWETATSLQ 735
Query: 88 ELKVLFKKSKETSDF 102
EL+ LF+ SK +D
Sbjct: 736 ELERLFELSKPKTDI 750
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 38/53 (71%), Gaps = 4/53 (7%)
Query: 5 ERC----YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEF 53
E+C Y+EIKYDGER+Q+HK G+ F++FSRSLKP L+HK + ++ F
Sbjct: 424 EKCSKEMYAEIKYDGERLQLHKDGSNFRFFSRSLKPALDHKVVDLNKVVSEAF 476
>gi|312094324|ref|XP_003147982.1| DNA ligase III [Loa loa]
Length = 572
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/75 (61%), Positives = 59/75 (78%), Gaps = 3/75 (4%)
Query: 31 SRSLKP---VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLP 87
SRSL P V++ K PVWEI+GAEF++++ HTA GISIRFPRV KIRDDK+W+TAT+L
Sbjct: 408 SRSLVPDFIVIDPKESPVWEIAGAEFTRSDNHTASGISIRFPRVIKIRDDKNWETATSLQ 467
Query: 88 ELKVLFKKSKETSDF 102
EL+ LF+ SK +D
Sbjct: 468 ELERLFELSKPKTDI 482
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 38/53 (71%), Gaps = 4/53 (7%)
Query: 5 ERC----YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEF 53
E+C Y+EIKYDGER+Q+HK G+ F++FSRSLKP L+HK + ++ F
Sbjct: 156 EKCSKEMYAEIKYDGERLQLHKDGSNFRFFSRSLKPALDHKVVDLNKVVSEAF 208
>gi|324502106|gb|ADY40927.1| DNA ligase 3 [Ascaris suum]
Length = 913
Score = 93.2 bits (230), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 59/75 (78%), Gaps = 3/75 (4%)
Query: 31 SRSLKP---VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLP 87
SRSL P + + K PVWEI+GAEFS+++ H+A GISIRFPRVTKIRDDK W +ATN+
Sbjct: 734 SRSLVPDFVIDDPKKAPVWEITGAEFSRSDNHSARGISIRFPRVTKIRDDKSWSSATNID 793
Query: 88 ELKVLFKKSKETSDF 102
EL+ +F+ SK+ +DF
Sbjct: 794 ELQRMFEVSKQKTDF 808
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 35/49 (71%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQA 56
+SEIKYDGER+Q+HK G+ F +FSRSL+PV EHK + ++ F +
Sbjct: 470 FSEIKYDGERLQLHKSGDTFTFFSRSLRPVQEHKVSHLSDVIPQAFPKG 518
>gi|47214654|emb|CAG00890.1| unnamed protein product [Tetraodon nigroviridis]
Length = 873
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/47 (80%), Positives = 46/47 (97%)
Query: 44 PVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELK 90
PVWEI+GAEFS++E+HTADGISIRFPR+T+IRDDKDWK+ATNL +LK
Sbjct: 827 PVWEITGAEFSKSEMHTADGISIRFPRMTRIRDDKDWKSATNLHQLK 873
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/35 (82%), Positives = 30/35 (85%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKA 42
YSEIKYDGERVQVHK G+ F YFSRSLKPVL HK
Sbjct: 440 YSEIKYDGERVQVHKNGDSFSYFSRSLKPVLPHKV 474
>gi|326498483|dbj|BAJ98669.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 937
Score = 89.4 bits (220), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/71 (63%), Positives = 55/71 (77%), Gaps = 3/71 (4%)
Query: 30 FSRSLKP---VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNL 86
SR L P V++ K PVWEI+GAEFS+++ HTA+GISIRFPRVTK+R+DK WK ATNL
Sbjct: 698 ISRELVPDFIVIDPKKSPVWEITGAEFSKSKQHTANGISIRFPRVTKVREDKTWKEATNL 757
Query: 87 PELKVLFKKSK 97
L LF+KSK
Sbjct: 758 QYLTELFEKSK 768
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 45/73 (61%), Gaps = 5/73 (6%)
Query: 6 RC----YSEIKYDGERVQVHK-KGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHT 60
RC Y+EIKYDGER+Q+HK K N+FK+FSRSLKPV EHK + + F + E
Sbjct: 430 RCPKGFYAEIKYDGERLQLHKDKTNQFKFFSRSLKPVTEHKIHQLSQYVVQAFPKGESMI 489
Query: 61 ADGISIRFPRVTK 73
DG + R TK
Sbjct: 490 LDGEILLVDRKTK 502
>gi|350407883|ref|XP_003488227.1| PREDICTED: DNA ligase 3-like [Bombus impatiens]
Length = 1012
Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 60/86 (69%), Gaps = 6/86 (6%)
Query: 16 ERVQVHKKGNEFKYFSRSLKPVL------EHKAQPVWEISGAEFSQAEIHTADGISIRFP 69
+ +++ K + + R+ KP++ + K QPVWEI+GAEF+ +HTADGISIRFP
Sbjct: 667 DMIKISKDPAKVPSWLRANKPMIPDFVAKDPKKQPVWEITGAEFTNQGVHTADGISIRFP 726
Query: 70 RVTKIRDDKDWKTATNLPELKVLFKK 95
RVT+IR DKDW +AT L +L+ LFK+
Sbjct: 727 RVTRIRSDKDWSSATTLNDLRRLFKQ 752
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/35 (82%), Positives = 32/35 (91%)
Query: 9 SEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQ 43
+E+KYDGERVQVHKKGNEF+YFSRSLKPVL HK
Sbjct: 426 AEVKYDGERVQVHKKGNEFRYFSRSLKPVLPHKVN 460
>gi|340721941|ref|XP_003399371.1| PREDICTED: LOW QUALITY PROTEIN: DNA ligase 3-like [Bombus
terrestris]
Length = 1013
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 60/86 (69%), Gaps = 6/86 (6%)
Query: 16 ERVQVHKKGNEFKYFSRSLKPVL------EHKAQPVWEISGAEFSQAEIHTADGISIRFP 69
+ +++ K + + R+ KP++ + K QPVWEI+GAEF+ +HTADGISIRFP
Sbjct: 668 DMIKIGKDPAKVPTWLRANKPMIPDFVAKDPKKQPVWEITGAEFTNQGVHTADGISIRFP 727
Query: 70 RVTKIRDDKDWKTATNLPELKVLFKK 95
RVT+IR DKDW +AT L +L+ LFK+
Sbjct: 728 RVTRIRSDKDWTSATTLNDLRRLFKQ 753
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/35 (82%), Positives = 32/35 (91%)
Query: 9 SEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQ 43
+E+KYDGERVQVHKKGNEF+YFSRSLKPVL HK
Sbjct: 427 AEVKYDGERVQVHKKGNEFRYFSRSLKPVLPHKVN 461
>gi|241614142|ref|XP_002406581.1| DNA ligase, putative [Ixodes scapularis]
gi|215500833|gb|EEC10327.1| DNA ligase, putative [Ixodes scapularis]
Length = 851
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 43/54 (79%), Positives = 48/54 (88%)
Query: 45 VWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKSKE 98
VWEISGAEF++AEIHTADGISIRFPRVT+IR DK K AT+LPEL+ LFK SKE
Sbjct: 669 VWEISGAEFTRAEIHTADGISIRFPRVTRIRYDKTPKEATSLPELRKLFKVSKE 722
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/42 (66%), Positives = 33/42 (78%), Gaps = 4/42 (9%)
Query: 6 RC----YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQ 43
RC Y+EIKYDGERVQ+HK+G+ F +FSRSLKPV HK Q
Sbjct: 386 RCPDGMYAEIKYDGERVQLHKQGSNFLFFSRSLKPVSPHKVQ 427
>gi|156375378|ref|XP_001630058.1| predicted protein [Nematostella vectensis]
gi|156217071|gb|EDO37995.1| predicted protein [Nematostella vectensis]
Length = 894
Score = 87.8 bits (216), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/62 (69%), Positives = 50/62 (80%), Gaps = 3/62 (4%)
Query: 32 RSLKP---VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPE 88
RSL P V + K PVWEI+GAEFS++ HTADGISIRFPRVT+IRDDKDW+TAT+L
Sbjct: 715 RSLIPDFVVDDPKKAPVWEITGAEFSKSTTHTADGISIRFPRVTRIRDDKDWETATDLDL 774
Query: 89 LK 90
LK
Sbjct: 775 LK 776
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/34 (76%), Positives = 31/34 (91%)
Query: 9 SEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKA 42
+EIKYDGERVQVHK G++F++FSRSLKPVL HK
Sbjct: 455 AEIKYDGERVQVHKSGSKFEFFSRSLKPVLPHKV 488
>gi|170582204|ref|XP_001896024.1| DNA ligase III [Brugia malayi]
gi|158596852|gb|EDP35124.1| DNA ligase III, putative [Brugia malayi]
Length = 607
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 48/57 (84%), Gaps = 3/57 (5%)
Query: 31 SRSLKP---VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTAT 84
SRSL P V++ K PVWEI+GAEF++++ HTA GISIRFPRVTKIRDDK+W+TAT
Sbjct: 472 SRSLVPDFIVMDPKESPVWEIAGAEFTRSDNHTASGISIRFPRVTKIRDDKNWETAT 528
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 37/50 (74%)
Query: 4 NERCYSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEF 53
N+ Y+EIKYDGER+Q+HK G++F +FSRSLKP L+HK + +I F
Sbjct: 204 NKEMYAEIKYDGERLQLHKDGSKFMFFSRSLKPTLDHKVVDLNKIISEAF 253
>gi|391345556|ref|XP_003747051.1| PREDICTED: DNA ligase 3 [Metaseiulus occidentalis]
Length = 900
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/54 (75%), Positives = 46/54 (85%)
Query: 45 VWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKSKE 98
VWEI+GAEFS+AE HTA+GISIRFPRVT+IRDDK K AT L EL+ LFK SKE
Sbjct: 666 VWEITGAEFSKAEGHTANGISIRFPRVTRIRDDKLPKDATTLAELENLFKTSKE 719
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 43/62 (69%), Gaps = 4/62 (6%)
Query: 6 RC----YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTA 61
RC ++E+KYDGERVQ+HK+G++F YFSRSLKPV++HK + + F+Q +
Sbjct: 383 RCPKGMFTEVKYDGERVQLHKQGDKFLYFSRSLKPVVDHKVKHFKQYIPKAFTQGDSLII 442
Query: 62 DG 63
DG
Sbjct: 443 DG 444
>gi|402589499|gb|EJW83431.1| hypothetical protein WUBG_05655 [Wuchereria bancrofti]
Length = 212
Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%), Gaps = 3/57 (5%)
Query: 31 SRSLKP---VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTAT 84
SRSL P V++ K PVWEI+GAEF+++ HTA GISIRFPRVTKIRDDK+W+TAT
Sbjct: 59 SRSLVPDFIVIDPKESPVWEIAGAEFTRSHNHTASGISIRFPRVTKIRDDKNWETAT 115
>gi|377830089|ref|YP_005296337.1| unnamed protein product [Cotia virus SPAn232]
gi|377814332|gb|AFB76951.1| DNA ligase [Cotia virus SPAn232]
Length = 559
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/53 (66%), Positives = 41/53 (77%)
Query: 41 KAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLF 93
K PVWEISG EF+++ HTADGISIRFPR IR+DKDW +ATNL EL L+
Sbjct: 500 KTSPVWEISGYEFTKSPSHTADGISIRFPRCKNIRNDKDWLSATNLQELITLY 552
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD 62
+ E+KYDGERVQ+HK+ ++KYF+R+ K V +HK ++ F A+ D
Sbjct: 228 FLELKYDGERVQIHKQNKKYKYFTRNSKDVTQHKIDGFDKLFDDAFKDADNFIMD 282
>gi|167522421|ref|XP_001745548.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775897|gb|EDQ89519.1| predicted protein [Monosiga brevicollis MX1]
Length = 1132
Score = 79.7 bits (195), Expect = 2e-13, Method: Composition-based stats.
Identities = 36/59 (61%), Positives = 48/59 (81%)
Query: 44 PVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKSKETSDF 102
P+ EI+GAEFS++ H+ADGISIRFPR+ ++R DK+ TAT+L ELKVLFK SK +S+
Sbjct: 739 PILEIAGAEFSESRAHSADGISIRFPRIARVRSDKNADTATSLSELKVLFKASKASSEL 797
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/33 (72%), Positives = 30/33 (90%)
Query: 9 SEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
+EIKYDGERVQVHK+G+ F++FSRSLK V +HK
Sbjct: 462 AEIKYDGERVQVHKQGDNFRFFSRSLKEVQDHK 494
>gi|211956416|ref|YP_002302485.1| DNA ligase-like protein [Deerpox virus W-1170-84]
gi|115503211|gb|ABI99129.1| DNA ligase-like protein [Deerpox virus W-1170-84]
Length = 562
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 47/56 (83%)
Query: 41 KAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
++ PVWEI G+ F++++ HTADGISIRFPR +IR+DK+W +ATNL +L+ L+KKS
Sbjct: 506 RSAPVWEIVGSGFTKSQYHTADGISIRFPRCQRIRNDKNWISATNLNQLRELYKKS 561
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 36/56 (64%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTADG 63
YSE+KYDGERVQ+HKK N + YFSR+LKPVL HK ++ F A+ D
Sbjct: 234 YSEVKYDGERVQIHKKDNVYNYFSRNLKPVLTHKIDGFDKLLTDAFPTAKNFILDA 289
>gi|62637522|ref|YP_227520.1| DNA ligase-like protein [Deerpox virus W-848-83]
gi|115503382|gb|ABI99300.1| DNA ligase-like protein [Deerpox virus W-848-83]
Length = 562
Score = 79.3 bits (194), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 47/56 (83%)
Query: 41 KAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
++ PVWEI G+ F++++ HTADGISIRFPR +IR+DK+W +ATNL +L+ L+KKS
Sbjct: 506 RSAPVWEIVGSGFTKSQYHTADGISIRFPRCQRIRNDKNWISATNLNQLRELYKKS 561
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 36/56 (64%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTADG 63
YSE+KYDGERVQ+HKK N + YFSR+LKPVL HK ++ F A+ D
Sbjct: 234 YSEVKYDGERVQIHKKDNVYNYFSRNLKPVLTHKIDGFDKLLTDAFPTAKNFILDA 289
>gi|9633943|ref|NP_052022.1| gp133R [Rabbit fibroma virus]
gi|6578662|gb|AAF18016.1|AF170722_134 gp133R [Rabbit fibroma virus]
Length = 559
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/53 (67%), Positives = 41/53 (77%)
Query: 41 KAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLF 93
K PVWEISGA FS + HTA+GISIRFPR TKIRDDK W+ AT+L EL L+
Sbjct: 505 KKAPVWEISGASFSSSPNHTANGISIRFPRCTKIRDDKSWRDATSLRELTALY 557
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTADG 63
Y+EIKYDGERVQ+HK + ++++SR+L+PV HK Q + E F A D
Sbjct: 233 YAEIKYDGERVQIHKYDDVYEFYSRNLRPVTPHKVQGLDEALSIAFPSANNFILDA 288
>gi|392838|gb|AAA67138.1| ATP-dependent DNA ligase [Rabbit fibroma virus]
Length = 559
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/53 (67%), Positives = 41/53 (77%)
Query: 41 KAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLF 93
K PVWEISGA FS + HTA+GISIRFPR TKIRDDK W+ AT+L EL L+
Sbjct: 505 KKAPVWEISGASFSSSPNHTANGISIRFPRCTKIRDDKSWRDATSLRELTALY 557
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTADG 63
Y+EIKYDGERVQ+HK + ++++SR+L+PV HK Q + E F A D
Sbjct: 233 YAEIKYDGERVQIHKYDDVYEFYSRNLRPVTPHKVQGLDEALSIAFPSANNFILDA 288
>gi|165969038|ref|YP_001650938.1| DNA ligase [Orgyia leucostigma NPV]
gi|164663534|gb|ABY65754.1| DNA ligase [Orgyia leucostigma NPV]
Length = 608
Score = 78.6 bits (192), Expect = 4e-13, Method: Composition-based stats.
Identities = 31/80 (38%), Positives = 57/80 (71%), Gaps = 4/80 (5%)
Query: 38 LEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKSK 97
++ K PVW+I G++ +++ HT DG+S+RFPRV+ +R+DK+W+TA+ L +++VL++ S+
Sbjct: 522 VDPKRMPVWQIIGSQLTKSNSHTPDGVSVRFPRVSSVREDKNWRTASTLQQIRVLYETSQ 581
Query: 98 ETSDFTLKPKYDRIKNLKLQ 117
+ +DF Y+ + LQ
Sbjct: 582 QQNDFV----YNETREHNLQ 597
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/33 (63%), Positives = 26/33 (78%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKA 42
E KYDGERVQVH NE K++SR+LKP+ HK+
Sbjct: 255 ETKYDGERVQVHYTNNEAKFYSRTLKPLASHKS 287
>gi|9633769|ref|NP_051847.1| m133R [Myxoma virus]
gi|6523988|gb|AAF15021.1|AF170726_137 m133R [Myxoma virus]
gi|170664599|gb|ACB28756.1| m133R [Myxoma virus]
gi|170664772|gb|ACB28928.1| m133R [recombinant virus 6918VP60-T2]
gi|301134659|gb|ADK63773.1| m133R [Myxoma virus]
gi|408684626|gb|AFU77065.1| m133R [Myxoma virus]
gi|408684794|gb|AFU77232.1| m133R [Myxoma virus]
gi|408684960|gb|AFU77397.1| m133R [Myxoma virus]
gi|408685129|gb|AFU77565.1| m133R [Myxoma virus]
gi|408685299|gb|AFU77734.1| m133R [Myxoma virus]
gi|408685467|gb|AFU77901.1| m133R [Myxoma virus]
gi|408685634|gb|AFU78067.1| m133R [Myxoma virus]
gi|408685802|gb|AFU78234.1| m133R [Myxoma virus]
gi|408685971|gb|AFU78402.1| m133R [Myxoma virus]
gi|408686137|gb|AFU78567.1| m133R [Myxoma virus]
gi|408686306|gb|AFU78735.1| m133R [Myxoma virus]
gi|408686474|gb|AFU78902.1| m133R [Myxoma virus]
gi|408686641|gb|AFU79068.1| m133R [Myxoma virus]
gi|408686809|gb|AFU79235.1| m133R [Myxoma virus]
gi|408686977|gb|AFU79402.1| m133R [Myxoma virus]
gi|408687145|gb|AFU79569.1| m133R [Myxoma virus]
gi|408687313|gb|AFU79736.1| m133R [Myxoma virus]
gi|408687481|gb|AFU79903.1| m133R [Myxoma virus]
gi|408687648|gb|AFU80069.1| m133R [Myxoma virus]
gi|408687816|gb|AFU80236.1| m133R [Myxoma virus]
gi|408687984|gb|AFU80403.1| m133R [Myxoma virus]
gi|408688152|gb|AFU80570.1| m133R [Myxoma virus]
gi|408688321|gb|AFU80738.1| m133R [Myxoma virus]
Length = 563
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/50 (70%), Positives = 39/50 (78%)
Query: 44 PVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLF 93
PVWEISGA FS + HTA+GISIRFPR TKIRDDK W+ AT L EL L+
Sbjct: 512 PVWEISGASFSSSPNHTANGISIRFPRCTKIRDDKSWRDATTLRELTTLY 561
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 49/100 (49%), Gaps = 22/100 (22%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTADGISIR 67
Y+EIKYDGERVQ+HK N ++++SR+LK V HK Q + D +SI
Sbjct: 237 YAEIKYDGERVQIHKYDNIYEFYSRNLKRVTPHKVQGL---------------DDALSIA 281
Query: 68 FPRVTKIRDDK-----DWKTATNLP--ELKVLFKKSKETS 100
FP D D +T LP L V K S E+S
Sbjct: 282 FPSANNFILDAELVLVDERTGECLPFGSLGVHKKASFESS 321
>gi|18640216|ref|NP_570290.1| SPV130 DNA ligase-like ptorein [Swinepox virus]
gi|18448623|gb|AAL69869.1| SPV130 DNA ligase-like ptorein [Swinepox virus]
Length = 559
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 45/55 (81%)
Query: 41 KAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKK 95
++ PVWEI+G+ F+ + HTA+GISIRFPR +IR+DK+W +ATNL EL+ LFKK
Sbjct: 504 RSSPVWEITGSGFTSSSQHTANGISIRFPRFARIRNDKNWISATNLQELEHLFKK 558
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 34/56 (60%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTADG 63
Y+EIKYDGERVQ+HK+ N + Y+SR+LK V +K + + F A+ D
Sbjct: 232 YAEIKYDGERVQIHKQNNTYVYYSRNLKQVSTYKIEGFDDCLSKAFPTAKNFILDA 287
>gi|148913010|ref|YP_001293324.1| hypothetical protein GTPV_gp127 [Goatpox virus Pellor]
Length = 557
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 46/60 (76%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K VWEISG+ F+++ HTADGISIRFPR KIR DK+W +ATNL ELK L+K+S
Sbjct: 498 VCDPKKSQVWEISGSSFTKSIHHTADGISIRFPRFKKIRYDKNWLSATNLNELKNLYKES 557
Score = 61.6 bits (148), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 36/55 (65%)
Query: 9 SEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTADG 63
+EIKYDGER+Q+HK+ N +KYFSR+LKPVL HK + E + F A D
Sbjct: 231 AEIKYDGERIQIHKENNLYKYFSRNLKPVLFHKIEGFDEFLTSAFPSANNFILDA 285
>gi|198450544|ref|XP_002137109.1| GA26759 [Drosophila pseudoobscura pseudoobscura]
gi|198131083|gb|EDY67667.1| GA26759 [Drosophila pseudoobscura pseudoobscura]
Length = 788
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 63/106 (59%), Gaps = 4/106 (3%)
Query: 2 AKNERCYSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK---AQPVWEISGAEFSQAEI 58
A NE + + ER +K N + +SL P + K + PVWEI+GAEF+++E
Sbjct: 492 ATNEEIHGSLMKLTERADANKTPN-WLLCKKSLVPDVLAKDPASMPVWEITGAEFTKSEA 550
Query: 59 HTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKSKETSDFTL 104
HTA GISIRFPR+T++R DK K A +L L+ L+ SK+ + L
Sbjct: 551 HTAAGISIRFPRITRLRSDKTAKEANDLAHLENLYDASKKNVNVDL 596
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 32/34 (94%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
Y E+KYDGERVQ+HK+G EFK+FSR+LKPV++HK
Sbjct: 260 YGEVKYDGERVQIHKQGTEFKFFSRNLKPVMDHK 293
>gi|195166094|ref|XP_002023870.1| GL27179 [Drosophila persimilis]
gi|194106030|gb|EDW28073.1| GL27179 [Drosophila persimilis]
Length = 788
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 63/106 (59%), Gaps = 4/106 (3%)
Query: 2 AKNERCYSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK---AQPVWEISGAEFSQAEI 58
A NE + + ER +K N + +SL P + K + PVWEI+GAEF+++E
Sbjct: 492 ATNEEIHGSLMKLTERADANKTPN-WLLCKKSLVPDVLAKDPASMPVWEITGAEFTKSEA 550
Query: 59 HTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKSKETSDFTL 104
HTA GISIRFPR+T++R DK K A +L L+ L+ SK+ + L
Sbjct: 551 HTAAGISIRFPRITRLRSDKTAKEANDLAHLEDLYDASKKNVNVDL 596
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 32/34 (94%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
Y E+KYDGERVQ+HK+G EFK+FSR+LKPV++HK
Sbjct: 260 YGEVKYDGERVQIHKQGTEFKFFSRNLKPVMDHK 293
>gi|358336160|dbj|GAA54723.1| DNA ligase 3 [Clonorchis sinensis]
Length = 747
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 53/81 (65%), Gaps = 10/81 (12%)
Query: 31 SRSLKP---VLEHKAQPVWEISGAEFSQAEIHTAD-------GISIRFPRVTKIRDDKDW 80
S+SL P V + K+ PVWEI+GAEFS+A HTA GISIRFPR TK R DK W
Sbjct: 522 SKSLIPDFVVEDPKSAPVWEITGAEFSRASTHTAGLSSGEAQGISIRFPRFTKARPDKTW 581
Query: 81 KTATNLPELKVLFKKSKETSD 101
+ ATN+ EL+ L +S + SD
Sbjct: 582 QQATNVSELQRLVAESGKRSD 602
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 30/38 (78%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPV 45
++EIKYDGERVQ+HK G++F +FSRSLK V +K V
Sbjct: 264 FAEIKYDGERVQIHKDGDKFVFFSRSLKAVPTNKVSHV 301
>gi|22595826|gb|AAN02858.1| DNA ligase-like protein [lumpy skin disease virus]
Length = 559
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 46/60 (76%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K VWEISGA F+++ HTADGISIRFPR KIR DK+W +AT+L ELK L+K+S
Sbjct: 500 VCDPKKSQVWEISGASFTKSIHHTADGISIRFPRFKKIRYDKNWLSATSLNELKNLYKES 559
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 34/55 (61%)
Query: 9 SEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTADG 63
+EIKYDGER+Q+HK N +KYFSR+LKPVL HK + E F A D
Sbjct: 233 AEIKYDGERIQIHKDNNLYKYFSRNLKPVLFHKIEGFDEFLTNAFPSANNFILDA 287
>gi|195445000|ref|XP_002070126.1| GK11194 [Drosophila willistoni]
gi|194166211|gb|EDW81112.1| GK11194 [Drosophila willistoni]
Length = 796
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 53/76 (69%), Gaps = 3/76 (3%)
Query: 32 RSLKP---VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPE 88
+SL P ++ + PVWEI+GAEF+++E HTA G+SIRFPR+T++R DK K A +LP
Sbjct: 517 KSLVPDVLAVDPQKMPVWEITGAEFTKSEAHTAAGVSIRFPRITRLRSDKTSKEANDLPH 576
Query: 89 LKVLFKKSKETSDFTL 104
L L++ SK+ + L
Sbjct: 577 LLNLYEASKKNVNVDL 592
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 35/40 (87%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWE 47
+ E+KYDGERVQ+HKKG EFK+FSR+LKPV++HK + + E
Sbjct: 256 FGEVKYDGERVQIHKKGKEFKFFSRNLKPVMDHKIKRLTE 295
>gi|195391356|ref|XP_002054326.1| GJ24382 [Drosophila virilis]
gi|194152412|gb|EDW67846.1| GJ24382 [Drosophila virilis]
Length = 818
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 54/82 (65%), Gaps = 7/82 (8%)
Query: 44 PVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKSKETSDFT 103
PVWEI+GAEF+Q+E HTA GISIRFPR+T++R DK A +L L+ L+ SK+ +
Sbjct: 558 PVWEITGAEFTQSEAHTAAGISIRFPRITRLRSDKSAMQANDLEHLEQLYAASKQNVNVD 617
Query: 104 L------KPKYDRIKN-LKLQK 118
L + D +KN LKL+K
Sbjct: 618 LLLANCEADRDDALKNKLKLEK 639
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 26/34 (76%), Positives = 33/34 (97%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
YSE+KYDGERVQ+HK G+EFK+FSR+LKPV++HK
Sbjct: 282 YSEVKYDGERVQIHKHGSEFKFFSRNLKPVVDHK 315
>gi|195109244|ref|XP_001999197.1| GI24375 [Drosophila mojavensis]
gi|193915791|gb|EDW14658.1| GI24375 [Drosophila mojavensis]
Length = 793
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 44/61 (72%)
Query: 44 PVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKSKETSDFT 103
PVWEI+GAEF+Q+E HTA GISIRFPR+T++R DK K A +L L+ L+ SK +
Sbjct: 536 PVWEITGAEFTQSEAHTAGGISIRFPRITRLRSDKCAKEANDLAHLEQLYAASKNNVNVD 595
Query: 104 L 104
L
Sbjct: 596 L 596
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/34 (82%), Positives = 33/34 (97%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
YSEIKYDGERVQ+HKKG EFK+FSR+LKPV++HK
Sbjct: 260 YSEIKYDGERVQIHKKGAEFKFFSRNLKPVMDHK 293
>gi|15150572|ref|NP_150567.1| LSDV133 DNA ligase-like protein [Lumpy skin disease virus NI-2490]
gi|15149144|gb|AAK85094.1| LSDV133 DNA ligase-like protein [Lumpy skin disease virus NI-2490]
Length = 559
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 46/60 (76%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K VWEISG+ F+++ HTADGISIRFPR KIR DK+W +AT+L ELK L+K+S
Sbjct: 500 VCDPKKSQVWEISGSSFTKSIHHTADGISIRFPRFKKIRYDKNWLSATSLNELKNLYKES 559
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 35/55 (63%)
Query: 9 SEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTADG 63
+EIKYDGER+Q+HK N +KYFSR+LKPVL HK + E + F A D
Sbjct: 233 AEIKYDGERIQIHKDNNLYKYFSRNLKPVLFHKIEGFDEFLTSAFPSANNFILDA 287
>gi|22595668|gb|AAN02701.1| DNA ligase-like protein [Lumpy skin disease virus NW-LW]
Length = 559
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 46/60 (76%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K VWEISG+ F+++ HTADGISIRFPR KIR DK+W +AT+L ELK L+K+S
Sbjct: 500 VCDPKKSQVWEISGSSFTKSIHHTADGISIRFPRFKKIRYDKNWLSATSLNELKNLYKES 559
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 35/55 (63%)
Query: 9 SEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTADG 63
+EIKYDGER+Q+HK N +KYFSR+LKPVL HK + E + F A D
Sbjct: 233 AEIKYDGERIQIHKDNNLYKYFSRNLKPVLFHKIEGFDEFLTSAFPSANNFILDA 287
>gi|195500457|ref|XP_002097381.1| GE24522 [Drosophila yakuba]
gi|194183482|gb|EDW97093.1| GE24522 [Drosophila yakuba]
Length = 785
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 53/77 (68%), Gaps = 3/77 (3%)
Query: 31 SRSLKPVLEHK---AQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLP 87
S+SL P + K PVWEI+GAEF++++ HTA GISIRFPR+T+ R DK K AT+L
Sbjct: 518 SKSLVPDVLAKDPLEMPVWEITGAEFTKSDAHTASGISIRFPRITRRRSDKSTKEATDLA 577
Query: 88 ELKVLFKKSKETSDFTL 104
L+ LF+ SK+ + L
Sbjct: 578 HLEDLFEASKKNVNVDL 594
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/40 (70%), Positives = 37/40 (92%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWE 47
YSEIKYDGERVQ+HK+GN+FK+FSR+LKPV++HK + + E
Sbjct: 258 YSEIKYDGERVQIHKQGNDFKFFSRNLKPVVDHKIRALKE 297
>gi|195053390|ref|XP_001993609.1| GH20153 [Drosophila grimshawi]
gi|193895479|gb|EDV94345.1| GH20153 [Drosophila grimshawi]
Length = 799
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 44/61 (72%)
Query: 44 PVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKSKETSDFT 103
PVWEI+GAEF+Q+E HTA GISIRFPR+T++R DK A +L L+ L+ SK+ +
Sbjct: 539 PVWEITGAEFTQSEAHTAAGISIRFPRITRLRSDKSAMQANDLEHLEQLYAASKQNVNVD 598
Query: 104 L 104
L
Sbjct: 599 L 599
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/34 (79%), Positives = 34/34 (100%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
YSEIKYDGERVQ+HK+G+EFK+FSR+LKPV++HK
Sbjct: 263 YSEIKYDGERVQIHKQGDEFKFFSRNLKPVMDHK 296
>gi|320166755|gb|EFW43654.1| zinc finger protein [Capsaspora owczarzaki ATCC 30864]
Length = 1138
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/61 (59%), Positives = 44/61 (72%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + KA PVWEI GAEFS++ HTA G SIRFP + + RDDK+WKTATNL E + K +
Sbjct: 544 VRDPKAAPVWEIGGAEFSKSSHHTAGGYSIRFPILERERDDKNWKTATNLEEFLDMVKGA 603
Query: 97 K 97
K
Sbjct: 604 K 604
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 28/36 (77%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPV 45
EIKYDGER+Q+HK G +F ++SRSLK V E K PV
Sbjct: 280 EIKYDGERIQIHKDGPKFTFYSRSLKSVAESKVGPV 315
>gi|194742640|ref|XP_001953809.1| GF17047 [Drosophila ananassae]
gi|190626846|gb|EDV42370.1| GF17047 [Drosophila ananassae]
Length = 788
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 44/61 (72%)
Query: 44 PVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKSKETSDFT 103
PVWEI+GAEF++AE HTA GISIRFPR+T+ R DK K A +L L+ LF SK+ +
Sbjct: 549 PVWEITGAEFTKAEAHTASGISIRFPRITRRRSDKTAKEANDLAHLEDLFDASKKNVNVD 608
Query: 104 L 104
L
Sbjct: 609 L 609
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 39/50 (78%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAE 57
YSEIKYDGERVQ+HK+G +FK+FSR+LKPV++HK + + + F AE
Sbjct: 273 YSEIKYDGERVQIHKQGKDFKFFSRNLKPVMDHKIKDLKDYIPRAFPGAE 322
>gi|21492584|ref|NP_659704.1| DNA ligase [Sheeppox virus]
Length = 557
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 45/60 (75%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K VWEISG+ F+++ HTADGISIRFPR KIR DK+W +AT+ ELK L+K+S
Sbjct: 498 VCDPKKSQVWEISGSSFTKSIHHTADGISIRFPRFKKIRYDKNWLSATSFNELKNLYKES 557
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 35/55 (63%)
Query: 9 SEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTADG 63
+EIKYDGER+Q+HK N +KYFSR+LKPVL HK + E + F A D
Sbjct: 231 AEIKYDGERIQIHKDNNLYKYFSRNLKPVLFHKIEGFDEFLTSAFPSANNFILDA 285
>gi|195329554|ref|XP_002031475.1| GM26013 [Drosophila sechellia]
gi|194120418|gb|EDW42461.1| GM26013 [Drosophila sechellia]
Length = 783
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 51/77 (66%), Gaps = 3/77 (3%)
Query: 31 SRSLKPVLEHK---AQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLP 87
S+SL P + K PVWEI+GAEF++++ HTA GISIRFPR+T+ R DK K A +L
Sbjct: 518 SKSLVPDVLAKDPMKMPVWEITGAEFTKSDAHTASGISIRFPRITRRRSDKSAKEANDLA 577
Query: 88 ELKVLFKKSKETSDFTL 104
L+ LF+ SK + L
Sbjct: 578 HLEDLFEASKSNVNVDL 594
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/34 (79%), Positives = 34/34 (100%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
YSEIKYDGERVQ+HK+GN+FK+FSR+LKPV++HK
Sbjct: 258 YSEIKYDGERVQIHKQGNDFKFFSRNLKPVVDHK 291
>gi|85815841|ref|NP_650187.2| DNA ligase III [Drosophila melanogaster]
gi|84796152|gb|AAF54801.3| DNA ligase III [Drosophila melanogaster]
gi|283135256|gb|ADB11088.1| UT01767p [Drosophila melanogaster]
Length = 806
Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 51/77 (66%), Gaps = 3/77 (3%)
Query: 31 SRSLKPVLEHK---AQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLP 87
S+SL P + K PVWEI+GAEF++++ HTA GIS+RFPR+T+ R DK K A +L
Sbjct: 538 SKSLVPDVLAKDPMKMPVWEITGAEFTKSDAHTASGISVRFPRITRRRSDKSAKEANDLA 597
Query: 88 ELKVLFKKSKETSDFTL 104
L+ LF+ SK + L
Sbjct: 598 HLEDLFEASKSNVNVDL 614
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/34 (79%), Positives = 34/34 (100%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
YSEIKYDGERVQ+HK+GN+FK+FSR+LKPV++HK
Sbjct: 278 YSEIKYDGERVQIHKQGNDFKFFSRNLKPVVDHK 311
>gi|21064069|gb|AAM29264.1| AT15112p [Drosophila melanogaster]
Length = 696
Score = 71.6 bits (174), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 51/77 (66%), Gaps = 3/77 (3%)
Query: 31 SRSLKPVLEHK---AQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLP 87
S+SL P + K PVWEI+GAEF++++ HTA GIS+RFPR+T+ R DK K A +L
Sbjct: 428 SKSLVPDVLAKDPMKMPVWEITGAEFTKSDAHTASGISVRFPRITRRRSDKSAKEANDLA 487
Query: 88 ELKVLFKKSKETSDFTL 104
L+ LF+ SK + L
Sbjct: 488 HLEDLFEASKSNVNVDL 504
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/34 (79%), Positives = 34/34 (100%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
YSEIKYDGERVQ+HK+GN+FK+FSR+LKPV++HK
Sbjct: 168 YSEIKYDGERVQIHKQGNDFKFFSRNLKPVVDHK 201
>gi|194901756|ref|XP_001980417.1| GG17130 [Drosophila erecta]
gi|190652120|gb|EDV49375.1| GG17130 [Drosophila erecta]
Length = 805
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 51/77 (66%), Gaps = 3/77 (3%)
Query: 31 SRSLKPVLEHK---AQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLP 87
S+SL P + K PVWEI+GAEF++++ HTA GISIRFPR+T+ R DK K A +L
Sbjct: 538 SKSLVPDVLAKDPLKMPVWEITGAEFTKSDAHTASGISIRFPRITRRRSDKSAKEANDLA 597
Query: 88 ELKVLFKKSKETSDFTL 104
L+ +F+ SK + L
Sbjct: 598 HLEDIFEASKTNVNVDL 614
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/40 (72%), Positives = 37/40 (92%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWE 47
YSEIKYDGERVQ+HK+GNEFK+FSR+LKPV++HK + + E
Sbjct: 278 YSEIKYDGERVQIHKQGNEFKFFSRNLKPVVDHKIRALKE 317
>gi|40555999|ref|NP_955084.1| CNPV061 DNA ligase [Canarypox virus]
gi|40233824|gb|AAR83407.1| CNPV061 DNA ligase [Canarypox virus]
Length = 565
Score = 70.9 bits (172), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 42/56 (75%)
Query: 41 KAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
+ PVWEI+GAEF+ + HTA ISIRFPR ++R+DKD+KTA+ L ++K L+ S
Sbjct: 506 ETAPVWEIAGAEFTTSPSHTAANISIRFPRCVRVREDKDFKTASTLSDIKALYSLS 561
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 33/54 (61%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTADG 63
E KYDGER+QVHK G+ FK+FSRSLKPV HK E+ F A DG
Sbjct: 237 EFKYDGERIQVHKDGDNFKFFSRSLKPVTPHKISSFEELLVQAFPSANNMILDG 290
>gi|5830724|emb|CAB54763.1| K4R protein [Variola minor virus]
Length = 552
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 42/54 (77%)
Query: 41 KAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
K +WEISGAEF+ ++ HTA+GISIRFPR T+IR+DK WK +T+L +L L K
Sbjct: 498 KQSQIWEISGAEFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTK 551
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQA-------EIHT 60
++E+KYDGERVQVHK NEF +FSR++KPVL +K + E F +A EI
Sbjct: 227 FAEVKYDGERVQVHKNNNEFAFFSRNMKPVLSYKVDYLKEYIPKAFKKATSIVLDSEIVL 286
Query: 61 ADGISIRFP 69
D +++ P
Sbjct: 287 VDEHNVQLP 295
>gi|94487447|gb|ABF26546.1| DNA ligase [Variola virus]
Length = 552
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 42/54 (77%)
Query: 41 KAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
K +WEISGAEF+ ++ HTA+GISIRFPR T+IR+DK WK +T+L +L L K
Sbjct: 498 KQSQIWEISGAEFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTK 551
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQA-------EIHT 60
++E+KYDGERVQVHK NEF +FSR++KPVL +K + E F +A EI
Sbjct: 227 FAEVKYDGERVQVHKNNNEFAFFSRNMKPVLSYKVDYLKEYIPKAFKKATSIVLDSEIVL 286
Query: 61 ADGISIRFP 69
D +++ P
Sbjct: 287 VDEHNVQLP 295
>gi|439074|gb|AAA60905.1| homolog of vaccinia virus CDS A50R (DNA ligase); putative [Variola
major virus]
gi|94484625|gb|ABF23738.1| DNA ligase [Variola virus]
gi|94484823|gb|ABF23935.1| DNA ligase [Variola virus]
gi|94485021|gb|ABF24132.1| DNA ligase [Variola virus]
gi|109724409|gb|ABG43534.1| DNA ligase [Variola virus]
Length = 552
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 42/54 (77%)
Query: 41 KAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
K +WEISGAEF+ ++ HTA+GISIRFPR T+IR+DK WK +T+L +L L K
Sbjct: 498 KQSQIWEISGAEFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTK 551
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQA-------EIHT 60
++E+KYDGERVQVHK NEF +FSR++KPVL +K + E F +A EI
Sbjct: 227 FAEVKYDGERVQVHKNNNEFAFFSRNMKPVLSYKVDYLKEYIPKAFKKATSIVLDSEIVL 286
Query: 61 ADGISIRFP 69
D +++ P
Sbjct: 287 VDEHNVQLP 295
>gi|94483809|gb|ABF22926.1| DNA ligase [Variola virus]
gi|94485826|gb|ABF24933.1| DNA ligase [Variola virus]
gi|94488055|gb|ABF27151.1| DNA ligase [Variola virus]
Length = 552
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 42/54 (77%)
Query: 41 KAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
K +WEISGAEF+ ++ HTA+GISIRFPR T+IR+DK WK +T+L +L L K
Sbjct: 498 KQSQIWEISGAEFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTK 551
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQA-------EIHT 60
++E+KYDGERVQVHK NEF +FSR++KPVL +K + E F +A EI
Sbjct: 227 FAEVKYDGERVQVHKNNNEFAFFSRNMKPVLSYKVDYLKEYIPKAFKKATSIVLDSEIVL 286
Query: 61 ADGISIRFP 69
D +++ P
Sbjct: 287 VDEHNVQLP 295
>gi|9627683|ref|NP_042206.1| hypothetical protein VARVgp162 [Variola virus]
gi|461948|sp|P33798.1|DNLI_VAR67 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|457053|emb|CAA49103.1| J4R [Variola virus]
gi|516403|emb|CAA47545.1| DNA ligase [Variola virus]
gi|94484013|gb|ABF23129.1| DNA ligase [Variola virus]
gi|94484216|gb|ABF23331.1| DNA ligase [Variola virus]
gi|94484423|gb|ABF23537.1| DNA ligase [Variola virus]
gi|94485219|gb|ABF24329.1| DNA ligase [Variola virus]
gi|94486030|gb|ABF25136.1| DNA ligase [Variola virus]
gi|94486231|gb|ABF25336.1| DNA ligase [Variola virus]
gi|94486434|gb|ABF25538.1| DNA ligase [Variola virus]
gi|94486637|gb|ABF25740.1| DNA ligase [Variola virus]
gi|94486839|gb|ABF25941.1| DNA ligase [Variola virus]
gi|94487244|gb|ABF26344.1| DNA ligase [Variola virus]
gi|94487650|gb|ABF26748.1| DNA ligase [Variola virus]
gi|94487851|gb|ABF26948.1| DNA ligase [Variola virus]
gi|94488258|gb|ABF27353.1| DNA ligase [Variola virus]
gi|94488458|gb|ABF27552.1| DNA ligase [Variola virus]
gi|94488658|gb|ABF27751.1| DNA ligase [Variola virus]
gi|94488859|gb|ABF27951.1| DNA ligase [Variola virus]
gi|94489059|gb|ABF28150.1| DNA ligase [Variola virus]
gi|94489259|gb|ABF28349.1| DNA ligase [Variola virus]
gi|94489460|gb|ABF28549.1| DNA ligase [Variola virus]
gi|94489662|gb|ABF28750.1| DNA ligase [Variola virus]
gi|94489861|gb|ABF28948.1| DNA ligase [Variola virus]
gi|94490067|gb|ABF29153.1| DNA ligase [Variola virus]
gi|94490270|gb|ABF29355.1| DNA ligase [Variola virus]
gi|109724205|gb|ABG43331.1| DNA ligase [Variola virus]
gi|109724612|gb|ABG43736.1| DNA ligase [Variola virus]
gi|109724816|gb|ABG43939.1| DNA ligase [Variola virus]
gi|109725019|gb|ABG44141.1| DNA ligase [Variola virus]
gi|109725224|gb|ABG44345.1| DNA ligase [Variola virus]
gi|109725429|gb|ABG44549.1| DNA ligase [Variola virus]
gi|109725631|gb|ABG44750.1| DNA ligase [Variola virus]
gi|109725835|gb|ABG44953.1| DNA ligase [Variola virus]
gi|109726038|gb|ABG45155.1| DNA ligase [Variola virus]
gi|109726242|gb|ABG45358.1| DNA ligase [Variola virus]
gi|109726444|gb|ABG45559.1| DNA ligase [Variola virus]
gi|109726648|gb|ABG45762.1| DNA ligase [Variola virus]
gi|745284|prf||2015436GH J4R gene
Length = 552
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 42/54 (77%)
Query: 41 KAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
K +WEISGAEF+ ++ HTA+GISIRFPR T+IR+DK WK +T+L +L L K
Sbjct: 498 KQSQIWEISGAEFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTK 551
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQA-------EIHT 60
++E+KYDGERVQVHK NEF +FSR++KPVL +K + E F +A EI
Sbjct: 227 FAEVKYDGERVQVHKNNNEFAFFSRNMKPVLSYKVDYLKEYIPKAFKKATSIVLDSEIVL 286
Query: 61 ADGISIRFP 69
D +++ P
Sbjct: 287 VDEHNVQLP 295
>gi|94487042|gb|ABF26143.1| DNA ligase [Variola virus]
Length = 552
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 42/54 (77%)
Query: 41 KAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
K +WEISGAEF+ ++ HTA+GISIRFPR T+IR+DK WK +T+L +L L K
Sbjct: 498 KQSQIWEISGAEFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTK 551
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQA-------EIHT 60
++E+KYDGERVQVHK NEF +FSR++KPVL +K + E F +A EI
Sbjct: 227 FAEVKYDGERVQVHKNNNEFAFFSRNMKPVLSYKVDYLKEYIPKAFKKATSIVLDSEIVL 286
Query: 61 ADGISIRFP 69
D +++ P
Sbjct: 287 VDEHNVQLP 295
>gi|94485421|gb|ABF24530.1| DNA ligase [Variola virus]
gi|94485624|gb|ABF24732.1| DNA ligase [Variola virus]
Length = 552
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 42/54 (77%)
Query: 41 KAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
K +WEISGAEF+ ++ HTA+GISIRFPR T+IR+DK WK +T+L +L L K
Sbjct: 498 KQSQIWEISGAEFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTK 551
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQA-------EIHT 60
++E+KYDGERVQVHK NEF +FSR++KPVL +K + E F +A EI
Sbjct: 227 FAEVKYDGERVQVHKNNNEFAFFSRNMKPVLSYKVDYLKEYIPKAFKKATSIVLDSEIVL 286
Query: 61 ADGISIRFP 69
D +++ P
Sbjct: 287 VDEHNVQLP 295
>gi|325559200|gb|ADZ30576.1| DNA ligase [Cowpox virus]
Length = 554
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 42/54 (77%)
Query: 41 KAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
K +WEISGAEF+ ++ HTA+GISIRFPR T+IR+DK WK +T+L +L L K
Sbjct: 500 KQSQIWEISGAEFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTK 553
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 36/49 (73%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQA 56
++E+KYDGERVQVHKK NEF +FSR++KPVL HK + E F +A
Sbjct: 229 FAEVKYDGERVQVHKKNNEFAFFSRNMKPVLSHKVDYLKEYIPKAFKKA 277
>gi|325558988|gb|ADZ30365.1| DNA ligase [Cowpox virus]
Length = 554
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 42/54 (77%)
Query: 41 KAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
K +WEISGAEF+ ++ HTA+GISIRFPR T+IR+DK WK +T+L +L L K
Sbjct: 500 KQSQIWEISGAEFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTK 553
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 35/49 (71%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQA 56
++E+KYDGERVQVHK NEF +FSR++KPVL HK + E F +A
Sbjct: 229 FAEVKYDGERVQVHKNNNEFAFFSRNMKPVLSHKVDYLKEYIPKAFKKA 277
>gi|167412705|gb|ABZ80139.1| DNA ligase [Vaccinia virus GLV-1h68]
Length = 552
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 44/58 (75%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
V + K +WEISGAEF+ ++ HTA+GISIRFPR T+IR+DK WK +T+L +L L K
Sbjct: 494 VEDPKQSQIWEISGAEFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTK 551
Score = 61.2 bits (147), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 35/49 (71%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQA 56
++E+KYDGERVQVHK NEF +FSR++KPVL HK + E F +A
Sbjct: 227 FAEVKYDGERVQVHKNNNEFAFFSRNMKPVLSHKVDYLKEYIPKAFKKA 275
>gi|20178549|ref|NP_619970.1| CPXV188 protein [Cowpox virus]
gi|20153167|gb|AAM13628.1|AF482758_179 CPXV188 protein [Cowpox virus]
Length = 554
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 42/54 (77%)
Query: 41 KAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
K +WEISGAEF+ ++ HTA+GISIRFPR T+IR+DK WK +T+L +L L K
Sbjct: 500 KQSQIWEISGAEFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTK 553
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 35/49 (71%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQA 56
++E+KYDGERVQVHK NEF +FSR++KPVL HK + E F +A
Sbjct: 229 FAEVKYDGERVQVHKNNNEFAFFSRNMKPVLSHKVDYLKEYIPKAFKKA 277
>gi|325559413|gb|ADZ30788.1| DNA ligase [Cowpox virus]
Length = 554
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 44/58 (75%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
V + K +WEISGAEF+ ++ HTA+GISIRFPR T+IR+DK WK +T+L +L L K
Sbjct: 496 VEDPKQSQIWEISGAEFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTK 553
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 36/49 (73%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQA 56
++E+KYDGERVQVHKK NEF +FSR++KPVL HK + E F +A
Sbjct: 229 FAEVKYDGERVQVHKKNNEFAFFSRNMKPVLSHKVDYLKEYIPKAFKKA 277
>gi|325558126|gb|ADZ29507.1| DNA ligase [Cowpox virus]
Length = 552
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 44/58 (75%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
V + K +WEISGAEF+ ++ HTA+GISIRFPR T+IR+DK WK +T+L +L L K
Sbjct: 494 VEDPKQSQIWEISGAEFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTK 551
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 36/49 (73%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQA 56
++E+KYDGERVQVHKK NEF +FSR++KPVL HK + E F +A
Sbjct: 227 FAEVKYDGERVQVHKKNNEFAFFSRNMKPVLSHKVDYLKEYIPKAFKKA 275
>gi|325558773|gb|ADZ30151.1| DNA ligase [Cowpox virus]
Length = 554
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 42/54 (77%)
Query: 41 KAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
K +WEISGAEF+ ++ HTA+GISIRFPR T+IR+DK WK +T+L +L L K
Sbjct: 500 KQSQIWEISGAEFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTK 553
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 35/49 (71%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQA 56
++E+KYDGERVQVHK NEF +FSR++KPVL HK + E F +A
Sbjct: 229 FAEVKYDGERVQVHKNNNEFAFFSRNMKPVLSHKVDYLKEYIPKAFKKA 277
>gi|160858060|emb|CAM58348.1| ATP-dependent DNA ligase [Vaccinia virus Ankara]
Length = 552
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 42/54 (77%)
Query: 41 KAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
K +WEISGAEF+ ++ HTA+GISIRFPR T+IR+DK WK +T+L +L L K
Sbjct: 498 KQSQIWEISGAEFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTK 551
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 35/49 (71%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQA 56
++E+KYDGERVQVHK NEF +FSR++KPVL HK + E F +A
Sbjct: 227 FAEVKYDGERVQVHKNNNEFAFFSRNMKPVLSHKVDYLKEYIPKAFKKA 275
>gi|88854250|gb|ABD52668.1| ATP-dependent DNA ligase [Vaccinia virus]
Length = 552
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 42/54 (77%)
Query: 41 KAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
K +WEISGAEF+ ++ HTA+GISIRFPR T+IR+DK WK +T+L +L L K
Sbjct: 498 KQSQIWEISGAEFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTK 551
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 35/49 (71%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQA 56
++E+KYDGERVQVHK NEF +FSR++KPVL HK + E F +A
Sbjct: 227 FAEVKYDGERVQVHKNNNEFAFFSRNMKPVLSHKVDYLKEYIPKAFKKA 275
>gi|118775|sp|P20492.1|DNLI_VACCC RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|335530|gb|AAA48182.1| putative A50R [Vaccinia virus Copenhagen]
Length = 552
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 42/54 (77%)
Query: 41 KAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
K +WEISGAEF+ ++ HTA+GISIRFPR T+IR+DK WK +T+L +L L K
Sbjct: 498 KQSQIWEISGAEFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTK 551
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 35/49 (71%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQA 56
++E+KYDGERVQVHK NEF +FSR++KPVL HK + E F +A
Sbjct: 227 FAEVKYDGERVQVHKNNNEFAFFSRNMKPVLSHKVDYLKEYIPKAFKKA 275
>gi|325558342|gb|ADZ29722.1| DNA ligase [Cowpox virus]
Length = 552
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 42/54 (77%)
Query: 41 KAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
K +WEISGAEF+ ++ HTA+GISIRFPR T+IR+DK WK +T+L +L L K
Sbjct: 498 KQSQIWEISGAEFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTK 551
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 35/49 (71%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQA 56
++E+KYDGERVQVHK NEF +FSR++KPVL HK + E F +A
Sbjct: 227 FAEVKYDGERVQVHKNNNEFAFFSRNMKPVLSHKVDYLKEYIPKAFKKA 275
>gi|51342319|gb|AAU01363.1| MPXV-WRAIR153 [Monkeypox virus]
gi|58220623|gb|AAW67911.1| MPXV-SL-153 [Monkeypox virus]
gi|59858959|gb|AAX09254.1| MPXV-COP-153 [Monkeypox virus]
gi|68448842|gb|AAY96965.1| DNA ligase [Monkeypox virus]
gi|68449444|gb|AAY97564.1| DNA ligase [Monkeypox virus]
gi|68449644|gb|AAY97763.1| DNA ligase [Monkeypox virus]
Length = 559
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 42/54 (77%)
Query: 41 KAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
K +WEISGAEF+ ++ HTA+GISIRFPR T+IR+DK WK +T+L +L L K
Sbjct: 500 KQSQIWEISGAEFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTK 553
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 36/49 (73%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQA 56
++E+KYDGERVQVHKK NEF +FSR++KPVL HK + E F +A
Sbjct: 229 FAEVKYDGERVQVHKKNNEFAFFSRNMKPVLSHKVDYLKEYIPKAFKKA 277
>gi|44971522|gb|AAS49872.1| RPXV159 [Rabbitpox virus]
Length = 552
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 42/54 (77%)
Query: 41 KAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
K +WEISGAEF+ ++ HTA+GISIRFPR T+IR+DK WK +T+L +L L K
Sbjct: 498 KQSQIWEISGAEFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTK 551
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 35/49 (71%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQA 56
++E+KYDGERVQVHK NEF +FSR++KPVL HK + E F +A
Sbjct: 227 FAEVKYDGERVQVHKNNNEFAFFSRNMKPVLSHKVDYLKEYIPKAFKKA 275
>gi|56713572|gb|AAW23612.1| ATP-dependent DNA ligase [Vaccinia virus]
gi|56713856|gb|AAW23894.1| ATP-dependent DNA ligase [Vaccinia virus]
Length = 552
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 42/54 (77%)
Query: 41 KAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
K +WEISGAEF+ ++ HTA+GISIRFPR T+IR+DK WK +T+L +L L K
Sbjct: 498 KQSQIWEISGAEFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTK 551
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 35/49 (71%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQA 56
++E+KYDGERVQVHK NEF +FSR++KPVL HK + E F +A
Sbjct: 227 FAEVKYDGERVQVHKNNNEFAFFSRNMKPVLSHKVDYLKEYIPKAFKKA 275
>gi|17975073|ref|NP_536587.1| A50R [Monkeypox virus Zaire-96-I-16]
gi|17529940|gb|AAL40618.1|AF380138_160 A50R [Monkeypox virus Zaire-96-I-16]
gi|68449042|gb|AAY97164.1| DNA ligase [Monkeypox virus]
gi|68449244|gb|AAY97365.1| DNA ligase [Monkeypox virus]
gi|300872787|gb|ADK39189.1| DNA ligase [Monkeypox virus]
gi|451327849|gb|AGF36721.1| DNA ligase [Monkeypox virus]
gi|451328057|gb|AGF36928.1| DNA ligase [Monkeypox virus]
Length = 554
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 42/54 (77%)
Query: 41 KAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
K +WEISGAEF+ ++ HTA+GISIRFPR T+IR+DK WK +T+L +L L K
Sbjct: 500 KQSQIWEISGAEFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTK 553
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 36/49 (73%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQA 56
++E+KYDGERVQVHKK NEF +FSR++KPVL HK + E F +A
Sbjct: 229 FAEVKYDGERVQVHKKNNEFAFFSRNMKPVLSHKVDYLKEYIPKAFKKA 277
>gi|373448794|gb|AEY74174.1| DNA ligase [Vaccinia virus]
Length = 552
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 42/54 (77%)
Query: 41 KAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
K +WEISGAEF+ ++ HTA+GISIRFPR T+IR+DK WK +T+L +L L K
Sbjct: 498 KQSQIWEISGAEFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTK 551
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 35/49 (71%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQA 56
++E+KYDGERVQVHK NEF +FSR++KPVL HK + E F +A
Sbjct: 227 FAEVKYDGERVQVHKNNNEFAFFSRNMKPVLSHKVDYLKEYIPKAFKKA 275
>gi|325558556|gb|ADZ29935.1| DNA ligase [Cowpox virus]
Length = 552
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 42/54 (77%)
Query: 41 KAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
K +WEISGAEF+ ++ HTA+GISIRFPR T+IR+DK WK +T+L +L L K
Sbjct: 498 KQSQIWEISGAEFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTK 551
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 35/49 (71%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQA 56
++E+KYDGERVQVHK NEF +FSR++KPVL HK + E F +A
Sbjct: 227 FAEVKYDGERVQVHKNNNEFAFFSRNMKPVLSHKVDYLKEYIPKAFKKA 275
>gi|22164754|ref|NP_671667.1| EVM148 [Ectromelia virus]
gi|22123895|gb|AAM92453.1|AF523264_149 EVM148 [Ectromelia virus]
gi|383866874|gb|AFH54717.1| DNA ligase [Ectromelia virus]
Length = 554
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 42/54 (77%)
Query: 41 KAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
K +WEISGAEF+ ++ HTA+GISIRFPR T+IR+DK WK +T+L +L L K
Sbjct: 500 KQSQIWEISGAEFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTK 553
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 36/49 (73%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQA 56
++E+KYDGERVQVHKK NEF +FSR++KPVL HK + E F +A
Sbjct: 229 FAEVKYDGERVQVHKKNNEFAFFSRNMKPVLSHKVDYLKEYIPKAFKKA 277
>gi|56404443|sp|O57250.1|DNLI_VACCA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|2772802|gb|AAB96541.1| DNA ligase [Vaccinia virus]
gi|47088491|gb|AAT10561.1| DNA ligase [Vaccinia virus]
Length = 552
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 42/54 (77%)
Query: 41 KAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
K +WEISGAEF+ ++ HTA+GISIRFPR T+IR+DK WK +T+L +L L K
Sbjct: 498 KQSQIWEISGAEFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTK 551
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 35/49 (71%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQA 56
++E+KYDGERVQVHK NEF +FSR++KPVL HK + E F +A
Sbjct: 227 FAEVKYDGERVQVHKNNNEFAFFSRNMKPVLSHKVDYLKEYIPKAFKKA 275
>gi|439966019|gb|AGB75893.1| ATP-dependent DNA ligase [Vaccinia virus]
Length = 552
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 42/54 (77%)
Query: 41 KAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
K +WEISGAEF+ ++ HTA+GISIRFPR T+IR+DK WK +T+L +L L K
Sbjct: 498 KQSQIWEISGAEFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTK 551
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 35/49 (71%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQA 56
++E+KYDGERVQVHK NEF +FSR++KPVL HK + E F +A
Sbjct: 227 FAEVKYDGERVQVHKNNNEFAFFSRNMKPVLSHKVDYLKEYIPKAFKKA 275
>gi|90660409|gb|ABD97523.1| DNA ligase [Cowpox virus]
Length = 552
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 42/54 (77%)
Query: 41 KAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
K +WEISGAEF+ ++ HTA+GISIRFPR T+IR+DK WK +T+L +L L K
Sbjct: 498 KQSQIWEISGAEFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTK 551
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 35/49 (71%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQA 56
++E+KYDGERVQVHK NEF +FSR++KPVL HK + E F +A
Sbjct: 227 FAEVKYDGERVQVHKNNNEFAFFSRNMKPVLSHKVDYLKEYIPKAFKKA 275
>gi|66275973|ref|YP_233058.1| ATP-dependent DNA ligase [Vaccinia virus]
gi|118776|sp|P16272.1|DNLI_VACCV RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|62230|emb|CAA34519.1| unnamed protein product [Vaccinia virus]
gi|222739|dbj|BAA01824.1| 63.3K protein [Vaccinia virus]
gi|29692282|gb|AAO89455.1| DNA ligase [Vaccinia virus WR]
Length = 552
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 42/54 (77%)
Query: 41 KAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
K +WEISGAEF+ ++ HTA+GISIRFPR T+IR+DK WK +T+L +L L K
Sbjct: 498 KQSQIWEISGAEFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTK 551
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 35/49 (71%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQA 56
++E+KYDGERVQVHK NEF +FSR++KPVL HK + E F +A
Sbjct: 227 FAEVKYDGERVQVHKNNNEFAFFSRNMKPVLSHKVDYLKEYIPKAFKKA 275
>gi|373447363|gb|AEY72749.1| DNA ligase [Vaccinia virus]
Length = 552
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 42/54 (77%)
Query: 41 KAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
K +WEISGAEF+ ++ HTA+GISIRFPR T+IR+DK WK +T+L +L L K
Sbjct: 498 KQSQIWEISGAEFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTK 551
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 35/49 (71%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQA 56
++E+KYDGERVQVHK NEF +FSR++KPVL HK + E F +A
Sbjct: 227 FAEVKYDGERVQVHKNNNEFAFFSRNMKPVLSHKVDYLKEYIPKAFKKA 275
>gi|37551621|gb|AAQ93273.1| DNA ligase [Vaccinia virus]
gi|373449747|gb|AEY75123.1| DNA ligase [Vaccinia virus]
Length = 552
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 42/54 (77%)
Query: 41 KAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
K +WEISGAEF+ ++ HTA+GISIRFPR T+IR+DK WK +T+L +L L K
Sbjct: 498 KQSQIWEISGAEFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTK 551
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 35/49 (71%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQA 56
++E+KYDGERVQVHK NEF +FSR++KPVL HK + E F +A
Sbjct: 227 FAEVKYDGERVQVHKNNNEFAFFSRNMKPVLSHKVDYLKEYIPKAFKKA 275
>gi|373448081|gb|AEY73464.1| DNA ligase [Vaccinia virus]
gi|373449036|gb|AEY74415.1| DNA ligase [Vaccinia virus]
gi|373449265|gb|AEY74643.1| DNA ligase [Vaccinia virus]
Length = 552
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 42/54 (77%)
Query: 41 KAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
K +WEISGAEF+ ++ HTA+GISIRFPR T+IR+DK WK +T+L +L L K
Sbjct: 498 KQSQIWEISGAEFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTK 551
Score = 61.2 bits (147), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 35/49 (71%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQA 56
++E+KYDGERVQVHK NEF +FSR++KPVL HK + E F +A
Sbjct: 227 FAEVKYDGERVQVHKNNNEFAFFSRNMKPVLSHKVDYLKEYIPKAFKKA 275
>gi|111184361|gb|ABH08281.1| HSPV172 [Horsepox virus]
Length = 552
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 42/54 (77%)
Query: 41 KAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
K +WEISGAEF+ ++ HTA+GISIRFPR T+IR+DK WK +T+L +L L K
Sbjct: 498 KQSQIWEISGAEFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTK 551
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 35/49 (71%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQA 56
++E+KYDGERVQVHK NEF +FSR++KPVL HK + E F +A
Sbjct: 227 FAEVKYDGERVQVHKNNNEFAFFSRNMKPVLSHKVDYLKEYIPKAFKKA 275
>gi|38349042|gb|AAR18018.1| DNA ligase [Vaccinia virus]
gi|373448553|gb|AEY73934.1| DNA ligase [Vaccinia virus]
Length = 552
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 42/54 (77%)
Query: 41 KAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
K +WEISGAEF+ ++ HTA+GISIRFPR T+IR+DK WK +T+L +L L K
Sbjct: 498 KQSQIWEISGAEFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTK 551
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 35/49 (71%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQA 56
++E+KYDGERVQVHK NEF +FSR++KPVL HK + E F +A
Sbjct: 227 FAEVKYDGERVQVHKNNNEFAFFSRNMKPVLSHKVDYLKEYIPKAFKKA 275
>gi|88900793|gb|ABD57705.1| VACV169 [Vaccinia virus]
Length = 552
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 42/54 (77%)
Query: 41 KAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
K +WEISGAEF+ ++ HTA+GISIRFPR T+IR+DK WK +T+L +L L K
Sbjct: 498 KQSQIWEISGAEFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTK 551
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 35/49 (71%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQA 56
++E+KYDGERVQVHK NEF +FSR++KPVL HK + E F +A
Sbjct: 227 FAEVKYDGERVQVHKNNNEFAFFSRNMKPVLSHKVDYLKEYIPKAFKKA 275
>gi|373447838|gb|AEY73222.1| DNA ligase [Vaccinia virus]
gi|373448323|gb|AEY73705.1| DNA ligase [Vaccinia virus]
gi|373449506|gb|AEY74883.1| DNA ligase [Vaccinia virus]
Length = 552
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 42/54 (77%)
Query: 41 KAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
K +WEISGAEF+ ++ HTA+GISIRFPR T+IR+DK WK +T+L +L L K
Sbjct: 498 KQSQIWEISGAEFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTK 551
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 35/49 (71%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQA 56
++E+KYDGERVQVHK NEF +FSR++KPVL HK + E F +A
Sbjct: 227 FAEVKYDGERVQVHKNNNEFAFFSRNMKPVLSHKVDYLKEYIPKAFKKA 275
>gi|373447602|gb|AEY72987.1| DNA ligase [Vaccinia virus]
Length = 552
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 42/54 (77%)
Query: 41 KAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
K +WEISGAEF+ ++ HTA+GISIRFPR T+IR+DK WK +T+L +L L K
Sbjct: 498 KQSQIWEISGAEFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTK 551
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 35/49 (71%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQA 56
++E+KYDGERVQVHK NEF +FSR++KPVL HK + E F +A
Sbjct: 227 FAEVKYDGERVQVHKNNNEFAFFSRNMKPVLSHKVDYLKEYIPKAFKKA 275
>gi|325557912|gb|ADZ29294.1| DNA ligase [Cowpox virus]
Length = 552
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 42/54 (77%)
Query: 41 KAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
K +WEISGAEF+ ++ HTA+GISIRFPR T+IR+DK WK +T+L +L L K
Sbjct: 498 KQSQIWEISGAEFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTK 551
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 36/49 (73%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQA 56
++E+KYDGERVQVHKK NEF +FSR++KPVL HK + E F +A
Sbjct: 227 FAEVKYDGERVQVHKKNNEFAFFSRNMKPVLSHKVDYLKEYIPKAFKKA 275
>gi|90819836|gb|ABD98646.1| VACV-DUKE-184 [Vaccinia virus]
Length = 552
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 42/54 (77%)
Query: 41 KAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
K +WEISGAEF+ ++ HTA+GISIRFPR T+IR+DK WK +T+L +L L K
Sbjct: 498 KQSQIWEISGAEFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTK 551
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 35/49 (71%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQA 56
++E+KYDGERVQVHK NEF +FSR++KPVL HK + E F +A
Sbjct: 227 FAEVKYDGERVQVHKNNNEFAFFSRNMKPVLSHKVDYLKEYIPKAFKKA 275
>gi|62288482|gb|AAX78496.1| unknown [synthetic construct]
Length = 578
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 42/54 (77%)
Query: 41 KAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
K +WEISGAEF+ ++ HTA+GISIRFPR T+IR+DK WK +T+L +L L K
Sbjct: 524 KQSQIWEISGAEFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTK 577
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 35/49 (71%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQA 56
++E+KYDGERVQVHK NEF +FSR++KPVL HK + E F +A
Sbjct: 253 FAEVKYDGERVQVHKNNNEFAFFSRNMKPVLSHKVDYLKEYIPKAFKKA 301
>gi|6969850|gb|AAF34062.1| TA61R [Vaccinia virus Tian Tan]
Length = 552
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 42/54 (77%)
Query: 41 KAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
K +WEISGAEF+ ++ HTA+GISIRFPR T+IR+DK WK +T+L +L L K
Sbjct: 498 KQSQIWEISGAEFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTK 551
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 35/49 (71%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQA 56
++E+KYDGERVQVHK NEF +FSR++KPVL HK + E F +A
Sbjct: 227 FAEVKYDGERVQVHKNNNEFAFFSRNMKPVLSHKVDYLKEYIPKAFKKA 275
>gi|323098574|gb|ADX22812.1| DNA ligase [Monkeypox virus]
gi|323098771|gb|ADX23008.1| DNA ligase [Monkeypox virus]
Length = 554
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 42/54 (77%)
Query: 41 KAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
K +WEISGAEF+ ++ HTA+GISIRFPR T+IR+DK WK +T+L +L L K
Sbjct: 500 KQSQIWEISGAEFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTK 553
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 36/49 (73%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQA 56
++E+KYDGERVQVHKK NEF +FSR++KPVL HK + E F +A
Sbjct: 229 FAEVKYDGERVQVHKKNNEFAFFSRNMKPVLSHKVDYLKEYIPKAFKKA 277
>gi|30519545|emb|CAD90720.1| A53R protein [Cowpox virus]
Length = 552
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 42/54 (77%)
Query: 41 KAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
K +WEISGAEF+ ++ HTA+GISIRFPR T+IR+DK WK +T+L +L L K
Sbjct: 498 KQSQIWEISGAEFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTK 551
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 35/49 (71%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQA 56
++E+KYDGERVQVHK NEF +FSR++KPVL HK + E F +A
Sbjct: 227 FAEVKYDGERVQVHKNNNEFAFFSRNMKPVLPHKVDYLREYLPKAFKKA 275
>gi|325514187|gb|ADZ24181.1| DNA ligase [Cowpox virus]
Length = 552
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 42/54 (77%)
Query: 41 KAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
K +WEISGAEF+ ++ HTA+GISIRFPR T+IR+DK WK +T+L +L L K
Sbjct: 498 KQSQIWEISGAEFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTK 551
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 35/49 (71%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQA 56
++E+KYDGERVQVHK NEF +FSR++KPVL HK + E F +A
Sbjct: 227 FAEVKYDGERVQVHKNNNEFAFFSRNMKPVLPHKVDYLREYLPKAFKKA 275
>gi|113195354|ref|YP_717484.1| DNA ligase [Taterapox virus]
gi|90660630|gb|ABD97743.1| DNA ligase [Taterapox virus]
Length = 552
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 42/54 (77%)
Query: 41 KAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
K +WEISGAEF+ ++ HTA+GISIRFPR T+IR+DK WK +T+L +L L K
Sbjct: 498 KQSQIWEISGAEFTPSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTK 551
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 35/49 (71%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQA 56
++E+KYDGERVQVHK NEF +FSR++KPVL +K + E F +A
Sbjct: 227 FAEVKYDGERVQVHKNNNEFAFFSRNMKPVLSYKVDYLKEYIPKAFKKA 275
>gi|18640405|ref|NP_570561.1| CMLV171 [Camelpox virus]
gi|18483081|gb|AAL73878.1|AF438165_168 DNA ligase [Camelpox virus M-96]
gi|19718142|gb|AAG37667.1| CMP168R [Camelpox virus CMS]
Length = 552
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 41/54 (75%)
Query: 41 KAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
K +WEISG EF+ ++ HTA+GISIRFPR T+IR+DK WK +T+L +L L K
Sbjct: 498 KQSQIWEISGTEFTSSKSHTANGISIRFPRFTRIREDKTWKESTHLNDLVNLTK 551
Score = 61.2 bits (147), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 35/49 (71%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQA 56
++E+KYDGERVQVHK NEF +FSR++KPVL HK + E F +A
Sbjct: 227 FAEVKYDGERVQVHKNNNEFAFFSRNMKPVLSHKVDYLKEYIPKAFKKA 275
>gi|9634713|ref|NP_039006.1| DNA ligase [Fowlpox virus]
gi|19864495|sp|Q67480.2|DNLI_FOWPN RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|7271541|gb|AAF44387.1|AF198100_34 ORF FPV043 DNA ligase [Fowlpox virus]
gi|41023335|emb|CAE52589.1| A50R DNA ligase orthologue [Fowlpox virus isolate HP-438/Munich]
Length = 564
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 41/53 (77%)
Query: 44 PVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
PVWEI G+EF+++ HTA ISIRFPR ++IR+DK ++TA NL ++K L+ S
Sbjct: 506 PVWEIIGSEFTRSSTHTASNISIRFPRCSRIREDKTYETANNLNDIKQLYAVS 558
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 32/54 (59%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTADG 63
E KYDGER+Q+HK FKYFSRSLKP+ HK E+ F A+ DG
Sbjct: 234 EFKYDGERIQIHKHDKNFKYFSRSLKPITPHKVTDFEELLDRAFPSAKNMILDG 287
>gi|453602|emb|CAA82805.1| DNA ligase [Fowlpox virus]
Length = 564
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 41/53 (77%)
Query: 44 PVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
PVWEI G+EF+++ HTA ISIRFPR ++IR+DK ++TA NL ++K L+ S
Sbjct: 506 PVWEIIGSEFTRSSTHTASNISIRFPRCSRIREDKTYETANNLNDIKQLYAVS 558
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 31/54 (57%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTADG 63
E KYDGER+Q+HK FKYFSRSLKP+ HK E+ F A DG
Sbjct: 234 EFKYDGERIQIHKHDKNFKYFSRSLKPITPHKVTDFEELLDRAFPSANNMILDG 287
>gi|68533696|gb|AAH98869.1| Zgc:112973 [Danio rerio]
Length = 752
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/35 (85%), Positives = 30/35 (85%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKA 42
YSEIKYDGERVQVHK GN F YFSRSLKPVL HK
Sbjct: 417 YSEIKYDGERVQVHKNGNHFSYFSRSLKPVLPHKV 451
>gi|345107342|ref|YP_004821507.1| ATP-dependent DNA ligase [Yoka poxvirus]
gi|344267416|gb|AEN03743.1| ATP-dependent DNA ligase [Yoka poxvirus]
Length = 551
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 38/49 (77%)
Query: 41 KAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPEL 89
K VWEI G++F+ ++ HTA GISIRFPR ++IR DKDWKT+T L ++
Sbjct: 498 KESQVWEIIGSDFTSSKFHTAAGISIRFPRFSRIRHDKDWKTSTYLKDI 546
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 32/40 (80%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWE 47
++EIKYDGERVQVHK GN F +FSR++KPV +HK + E
Sbjct: 227 FAEIKYDGERVQVHKNGNHFAFFSRNMKPVTKHKVDYLNE 266
>gi|195571451|ref|XP_002103716.1| GD20571 [Drosophila simulans]
gi|194199643|gb|EDX13219.1| GD20571 [Drosophila simulans]
Length = 362
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/34 (79%), Positives = 34/34 (100%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
YSEIKYDGERVQ+HK+GN+FK+FSR+LKPV++HK
Sbjct: 258 YSEIKYDGERVQIHKQGNDFKFFSRNLKPVVDHK 291
>gi|326931314|ref|XP_003211777.1| PREDICTED: DNA ligase 3-like [Meleagris gallopavo]
Length = 658
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 55/107 (51%), Gaps = 25/107 (23%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTADGISIR 67
Y+EIKYDGERVQVHK G+ F YFSRSLKPVL HK H D I
Sbjct: 415 YAEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHKVA---------------HFKDFIPQA 459
Query: 68 FPRVTKIRDDK-----DWKTATNLP--ELKV---LFKKSKETSDFTL 104
FP + D D KT LP L V L++ SKE ++F++
Sbjct: 460 FPGGHSMILDSEVLLIDNKTGKPLPFGSLGVHKELYQLSKEKAEFSV 506
>gi|355699358|gb|AES01101.1| ligase III, DNA, ATP-dependent [Mustela putorius furo]
Length = 598
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/34 (82%), Positives = 30/34 (88%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
+SEIKYDGERVQVHK G+ F YFSRSLKPVL HK
Sbjct: 505 FSEIKYDGERVQVHKNGDHFNYFSRSLKPVLPHK 538
>gi|417411773|gb|JAA52313.1| Putative atp-dependent dna ligase iii, partial [Desmodus rotundus]
Length = 583
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/36 (77%), Positives = 31/36 (86%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQ 43
+SEIKYDGERVQVHK G+ F YFSRSLKPVL HK +
Sbjct: 506 FSEIKYDGERVQVHKSGDHFSYFSRSLKPVLPHKVR 541
>gi|119600604|gb|EAW80198.1| ligase III, DNA, ATP-dependent, isoform CRA_b [Homo sapiens]
Length = 649
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/35 (80%), Positives = 30/35 (85%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKA 42
+SEIKYDGERVQVHK G+ F YFSRSLKPVL HK
Sbjct: 504 FSEIKYDGERVQVHKNGDHFSYFSRSLKPVLPHKV 538
>gi|440790289|gb|ELR11572.1| ATPdependent DNA ligase domain containing protein, partial
[Acanthamoeba castellanii str. Neff]
Length = 667
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + + PVWE++G F+ ++ HT +SIRFPRVT+IRDDKD+ T T++ L+ L + S
Sbjct: 440 VTDPEQAPVWEVAGQGFTDSKHHTT--LSIRFPRVTRIRDDKDFSTHTDVVHLRALAQAS 497
Query: 97 KETSDFT 103
E + T
Sbjct: 498 AEGTSMT 504
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTADG 63
++EIKYDGER+Q+HKKG+E+ +FSR+LK +LE K V + E ++AE DG
Sbjct: 162 FAEIKYDGERIQIHKKGDEYAFFSRNLKKILEWKVAAVRDYI-TESTEAESIILDG 216
>gi|292397694|ref|YP_003517760.1| DNA ligase [Lymantria xylina MNPV]
gi|291065411|gb|ADD73729.1| DNA ligase [Lymantria xylina MNPV]
Length = 583
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 40/72 (55%), Gaps = 7/72 (9%)
Query: 5 ERCYSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQ-------AE 57
E +E+KYDGERVQVHK G+ FK+FSR+LKPV EHK E F + AE
Sbjct: 225 EGVLAEVKYDGERVQVHKAGSRFKFFSRTLKPVPEHKVAGCREHLALAFPRGRNFILDAE 284
Query: 58 IHTADGISIRFP 69
I DG P
Sbjct: 285 IVMVDGSGEALP 296
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 43 QPVWEISGAEF-SQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKSKE 98
PVWEI+ +E + HTA G+++RFPR + R DKDW TAT+L E + L K +E
Sbjct: 503 MPVWEIACSEMKANIGAHTA-GVTMRFPRFKRFRPDKDWSTATDLQEAERLTKGFQE 558
>gi|9630988|ref|NP_047658.1| DNA ligase [Lymantria dispar MNPV]
gi|57012727|sp|Q9YMV2.1|DNLI_NPVLD RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|3822256|gb|AAC70207.1| DNA ligase [Lymantria dispar MNPV]
Length = 548
Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/37 (70%), Positives = 31/37 (83%)
Query: 5 ERCYSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
E +E+KYDGERVQVHK G+ FK+FSR+LKPV EHK
Sbjct: 191 EGALAEVKYDGERVQVHKAGSRFKFFSRTLKPVPEHK 227
Score = 58.2 bits (139), Expect = 6e-07, Method: Composition-based stats.
Identities = 31/63 (49%), Positives = 43/63 (68%), Gaps = 4/63 (6%)
Query: 44 PVWEISGAEFSQAEI--HTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKSKETSD 101
PVWEI+ +E +A I HTA G+++RFPRV + R DKDW TAT+L E + L + S+E +
Sbjct: 469 PVWEIACSEM-KANIGAHTA-GVTMRFPRVKRFRPDKDWSTATDLQEAEQLIRNSQENTK 526
Query: 102 FTL 104
T
Sbjct: 527 KTF 529
>gi|402582195|gb|EJW76141.1| hypothetical protein WUBG_12948, partial [Wuchereria bancrofti]
Length = 322
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/39 (61%), Positives = 33/39 (84%)
Query: 4 NERCYSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKA 42
N+ ++EIKYDGER+Q+HK G++F +FSRSLKP L+HK
Sbjct: 116 NKEMFAEIKYDGERLQLHKDGSKFMFFSRSLKPTLDHKV 154
>gi|330805110|ref|XP_003290530.1| hypothetical protein DICPUDRAFT_81260 [Dictyostelium purpureum]
gi|325079360|gb|EGC32964.1| hypothetical protein DICPUDRAFT_81260 [Dictyostelium purpureum]
Length = 1144
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Query: 1 MAKNERC-YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPV 45
+AK+ C YSEIKYDGER+Q+HK GN+F FSR+LKP++ K V
Sbjct: 269 VAKSSSCFYSEIKYDGERIQIHKDGNKFSCFSRNLKPLMPWKVDEV 314
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
Query: 37 VLEH-KAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKK 95
++EH + + EI AE ++ HT+ G S+RFPR+ + R+DKD+KTATNL EL L K
Sbjct: 547 IVEHPRDAMILEIESAELTKTNYHTS-GYSMRFPRIVRFREDKDYKTATNLQELMELGKD 605
Query: 96 SK 97
+K
Sbjct: 606 AK 607
>gi|328872844|gb|EGG21211.1| BRCT domain-containing protein [Dictyostelium fasciculatum]
Length = 1087
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/40 (57%), Positives = 31/40 (77%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWE 47
Y+EIKYDGER+Q+HK G FK++SR+LKP++ K V E
Sbjct: 284 YAEIKYDGERIQIHKDGKNFKFYSRNLKPIMPWKVVDVQE 323
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVL 92
V + K V+E+ AE + + HT+ G S+RFPR+TKIR DKD TAT E K L
Sbjct: 555 VSDPKKAMVFELEAAEITGTKHHTS-GYSMRFPRITKIRHDKDHDTATTFKEFKHL 609
>gi|66810247|ref|XP_638847.1| BRCT domain-containing protein [Dictyostelium discoideum AX4]
gi|74854521|sp|Q54QM4.1|DNL3_DICDI RecName: Full=DNA ligase 3; AltName: Full=DNA ligase III; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 3
gi|60467521|gb|EAL65543.1| BRCT domain-containing protein [Dictyostelium discoideum AX4]
Length = 1175
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Query: 1 MAKNERC-YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPV 45
+ K+ C Y+EIKYDGER+Q+HK GN+F +SR+LKP++ K V
Sbjct: 271 VVKSSECFYAEIKYDGERIQIHKDGNQFSCYSRNLKPLMPWKVDEV 316
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
Query: 41 KAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPEL 89
K ++EI AEF++++ HT G S+RFPR+ KIR DKD+KTAT L EL
Sbjct: 554 KQAMIFEIESAEFTKSDHHTT-GYSMRFPRILKIRHDKDYKTATTLEEL 601
>gi|281203965|gb|EFA78161.1| BRCT domain-containing protein [Polysphondylium pallidum PN500]
Length = 1017
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 31/38 (81%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPV 45
Y+EIKYDGER+Q+HK+GN++ FSR+LKPV K + V
Sbjct: 245 YAEIKYDGERIQIHKQGNDYFCFSRNLKPVQSWKVEQV 282
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 44/74 (59%), Gaps = 5/74 (6%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
V + K V+E+ AE + + HT+ G S+RFPR+ KIR DKDW T+T ELK L K
Sbjct: 516 VKDPKEAMVFEVESAELTGTKHHTS-GFSMRFPRIVKIRKDKDWATSTKFAELKDLAKDV 574
Query: 97 K----ETSDFTLKP 106
K ++ D +KP
Sbjct: 575 KIVPYDSDDEEIKP 588
>gi|406971955|gb|EKD95869.1| DNA ligase [uncultured bacterium]
Length = 176
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 54/92 (58%), Gaps = 9/92 (9%)
Query: 14 DGERVQVHKKGNEFK--------YFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTADGIS 65
D E V++ K ++FK +SL P + + + V EI E S ++ HT+ G +
Sbjct: 83 DEEWVKIKKLADKFKIKSVPKNVLIEKSLMPDVLIEPRIVLEIGADEISVSQNHTS-GYA 141
Query: 66 IRFPRVTKIRDDKDWKTATNLPELKVLFKKSK 97
+RFPR+ K R+DK+ ATNL E+++LFKK +
Sbjct: 142 LRFPRLIKFREDKNPTEATNLKEIELLFKKQR 173
>gi|342320736|gb|EGU12675.1| DNA ligase [Rhodotorula glutinis ATCC 204091]
Length = 946
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 41/70 (58%), Gaps = 8/70 (11%)
Query: 33 SLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTAT 84
SL P + K VWEI GA+F+ + ++ A G+SIRFPR KIRDDK + AT
Sbjct: 855 SLSPDIWFKPNEVWEIRGADFTLSPVYPAARSQLGNERGVSIRFPRFIKIRDDKGIEQAT 914
Query: 85 NLPELKVLFK 94
+ +L L++
Sbjct: 915 SAEQLAQLYE 924
>gi|301115426|ref|XP_002905442.1| DNA ligase, putative [Phytophthora infestans T30-4]
gi|262110231|gb|EEY68283.1| DNA ligase, putative [Phytophthora infestans T30-4]
Length = 3896
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 43/76 (56%), Gaps = 8/76 (10%)
Query: 33 SLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTAT 84
+KP + +A VWEI GA+ S + +TA GIS+RFPR +IRDDKD AT
Sbjct: 831 GIKPDVWFEASCVWEILGADLSISPKYTAAIGLVAKDRGISLRFPRFIRIRDDKDTTQAT 890
Query: 85 NLPELKVLFKKSKETS 100
N ++ L++ T+
Sbjct: 891 NSSQIADLYRAQGLTT 906
>gi|348666069|gb|EGZ05897.1| hypothetical protein PHYSODRAFT_532805 [Phytophthora sojae]
Length = 3954
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 8/75 (10%)
Query: 34 LKPVLEHKAQPVWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDWKTATN 85
+KP + +A VWEI GA+ S + +TA GIS+RFPR +IRDDKD ATN
Sbjct: 833 IKPDVWFEASCVWEILGADLSISPKYTAAIGLVAEDKGISLRFPRFIRIRDDKDTTQATN 892
Query: 86 LPELKVLFKKSKETS 100
++ L++ T+
Sbjct: 893 SSQIADLYRAQGLTT 907
>gi|257076027|ref|ZP_05570388.1| ATP-dependent DNA ligase [Ferroplasma acidarmanus fer1]
Length = 595
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 39/65 (60%), Gaps = 8/65 (12%)
Query: 43 QPVWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
Q V EI GAE + + IHT G+++RFPR+ KIRDDK+ + AT E+ L+K
Sbjct: 530 QIVMEIQGAEITVSPIHTCAFGKIEKDSGLALRFPRLIKIRDDKNAEDATTTNEIIELYK 589
Query: 95 KSKET 99
K+T
Sbjct: 590 MQKKT 594
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 4 NERCYSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEH 40
N E KYDG R ++HKKG++ K FSR L+ E+
Sbjct: 255 NHHVSFEYKYDGLRTELHKKGDKIKIFSRGLEETTEN 291
>gi|290973973|ref|XP_002669721.1| predicted protein [Naegleria gruberi]
gi|284083272|gb|EFC36977.1| predicted protein [Naegleria gruberi]
Length = 1260
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 34/46 (73%), Gaps = 6/46 (13%)
Query: 6 RC----YSEIKYDGERVQVH--KKGNEFKYFSRSLKPVLEHKAQPV 45
RC YSE+KYDGER+Q+H +K +E KYFSR+LK V E+K + V
Sbjct: 355 RCPNGFYSELKYDGERIQIHYDRKNDEIKYFSRNLKDVQEYKIKSV 400
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 41 KAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPEL 89
K VWEI GAEFS + IS+RFPRVTKIRDDKD TN E+
Sbjct: 643 KKSVVWEIQGAEFSVSS-RKDRPISVRFPRVTKIRDDKDVLDHTNYQEI 690
>gi|384245430|gb|EIE18924.1| ATP-dependent DNA ligase [Coccomyxa subellipsoidea C-169]
Length = 651
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 8/79 (10%)
Query: 30 FSRSLKPVLEHKAQPVWEISGAEFS-----QAEIHTAD---GISIRFPRVTKIRDDKDWK 81
+S +L P + A+ VWE+ A+FS +A + AD GISIRFPR+ K+RDDK +
Sbjct: 562 YSETLLPDIWFDAKTVWEVKCADFSISPRHKAALGLADPDKGISIRFPRLVKVRDDKTPE 621
Query: 82 TATNLPELKVLFKKSKETS 100
AT+ ++ ++ K TS
Sbjct: 622 DATSAEQVAEMYFKQALTS 640
>gi|290972643|ref|XP_002669061.1| ATP dependent DNA ligase [Naegleria gruberi]
gi|284082602|gb|EFC36317.1| ATP dependent DNA ligase [Naegleria gruberi]
Length = 915
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 34/46 (73%), Gaps = 6/46 (13%)
Query: 6 RC----YSEIKYDGERVQVH--KKGNEFKYFSRSLKPVLEHKAQPV 45
RC YSE+KYDGER+Q+H +K +E KYFSR+LK V E+K + V
Sbjct: 24 RCPNGFYSELKYDGERIQIHYDRKNDEIKYFSRNLKDVQEYKIKSV 69
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 41 KAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPEL 89
K VWEI GAEFS + IS+RFPRVTKIRDDKD TN E+
Sbjct: 312 KKSVVWEIQGAEFSVSS-RKDRPISVRFPRVTKIRDDKDVLDHTNYQEI 359
>gi|46309344|ref|YP_006234.1| ORF110 [Agrotis segetum granulovirus]
gi|46200561|gb|AAS82628.1| ORF110 [Agrotis segetum granulovirus]
Length = 565
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 6/68 (8%)
Query: 42 AQPVWEISGAEFSQAEIH------TADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKK 95
+ PVWE+ G A+ +D +SIR PR K+RDDK +K A+ L +LK+L
Sbjct: 482 SMPVWEMEGDFIRNAQNLWCCGDIVSDYVSIRLPRFIKVRDDKSFKEASRLLDLKLLCCI 541
Query: 96 SKETSDFT 103
S + S++T
Sbjct: 542 SNKNSNYT 549
>gi|307103045|gb|EFN51310.1| hypothetical protein CHLNCDRAFT_28217 [Chlorella variabilis]
Length = 673
Score = 50.1 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 8/71 (11%)
Query: 33 SLKPVLEHKAQPVWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDWKTAT 84
+L P + A+ VWEI A+ S + +H A GISIRFPR+ ++RDDK + AT
Sbjct: 538 TLIPDVWFDAKSVWEIKAADLSISPVHKAAIGQVDPAKGISIRFPRLVRVRDDKGPEDAT 597
Query: 85 NLPELKVLFKK 95
+ ++ +++K
Sbjct: 598 SAEQVAEMYRK 608
>gi|84617165|emb|CAH64534.1| DNA ligase (ATP) [Ferroplasma acidiphilum]
Length = 595
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 38/65 (58%), Gaps = 8/65 (12%)
Query: 43 QPVWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
Q V EI GAE + + IHT G ++RFPR+ KIRDDK+ + AT E+ L+K
Sbjct: 530 QIVMEIQGAEITVSPIHTCAFGKIEKDSGPALRFPRLIKIRDDKNAEDATTTNEIIELYK 589
Query: 95 KSKET 99
K+T
Sbjct: 590 MQKKT 594
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 4 NERCYSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEH 40
N E KYDG R ++HKKG++ K FSR L+ E+
Sbjct: 255 NHHVSFEYKYDGLRTELHKKGDKIKIFSRGLEETTEN 291
>gi|195382489|ref|XP_002049962.1| GJ20456 [Drosophila virilis]
gi|194144759|gb|EDW61155.1| GJ20456 [Drosophila virilis]
Length = 667
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 10/100 (10%)
Query: 10 EIKYDGERVQVHKKGNEFKYF--SRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD----- 62
+++ E H G+ YF SL+P + + VWE+ A+ S + IH A
Sbjct: 551 DLRLHSEFFNKHVTGSAKSYFRYDPSLEPDVWFEPVQVWEVKCADLSLSPIHRASIGIVD 610
Query: 63 ---GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKSKET 99
GIS+RFPR +IRDDK + AT+ ++ ++K +
Sbjct: 611 AERGISLRFPRFIRIRDDKSPENATDANQVAHMYKSQDQV 650
>gi|402470842|gb|EJW04879.1| DNA ligase I, ATP-dependent (dnl1) [Edhazardia aedis USNM 41457]
Length = 598
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 31 SRSLKPVLEHKAQPVWEISGAEFSQAEIHTA------DGISIRFPRVTKIRDDKDWKTAT 84
S ++KP + + VWE+ A FS + I++A GIS+RFPR + RDDK+ K AT
Sbjct: 516 SENIKPDVWLLPKFVWEVKAAGFSLSPIYSAAKNLNKQGISLRFPRFIRHRDDKEPKDAT 575
Query: 85 NLPELKVL---FKKSKETSD 101
++ + F K +E SD
Sbjct: 576 TSEQINTMFIEFNKDEEVSD 595
Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 18/24 (75%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSRS 33
E KYDGER Q+HK N++ FSR+
Sbjct: 256 EFKYDGERAQIHKFDNKYMIFSRN 279
>gi|66821251|ref|XP_644124.1| DNA ligase I [Dictyostelium discoideum AX4]
gi|74926714|sp|Q869E1.1|DNL1_DICDI RecName: Full=DNA ligase 1; AltName: Full=DNA ligase I; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 1
gi|60472186|gb|EAL70139.1| DNA ligase I [Dictyostelium discoideum AX4]
Length = 1192
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 50/89 (56%), Gaps = 9/89 (10%)
Query: 20 VHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTA--------DGISIRFPRV 71
+++ N+F+ FS S+KP + VWE+ A+ S + +HTA GI++RFPR
Sbjct: 1093 INQPRNQFR-FSDSIKPDVWFSPSCVWEVLAADLSISPVHTAASGILDPNKGIALRFPRF 1151
Query: 72 TKIRDDKDWKTATNLPELKVLFKKSKETS 100
+IR DK + AT+ ++ +++ K S
Sbjct: 1152 IRIRPDKSPEDATSSDQVVDMYQNQKINS 1180
>gi|281200629|gb|EFA74847.1| DNA ligase I [Polysphondylium pallidum PN500]
Length = 1072
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 8/67 (11%)
Query: 31 SRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKT 82
S LKP + + VWE+ A+ S + IHTA GI++RFPR +IR+DK+ +
Sbjct: 958 SEQLKPDVWFSPKQVWEVLAADLSISPIHTAAAGTLDPVKGIALRFPRFIRIREDKNPED 1017
Query: 83 ATNLPEL 89
ATN ++
Sbjct: 1018 ATNTSQI 1024
>gi|302847056|ref|XP_002955063.1| ATP-dependent DNA ligase [Volvox carteri f. nagariensis]
gi|300259591|gb|EFJ43817.1| ATP-dependent DNA ligase [Volvox carteri f. nagariensis]
Length = 648
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 8/89 (8%)
Query: 14 DGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTA--------DGIS 65
D R + + + +S +L P + A VWE+ A+ S + +H A GIS
Sbjct: 543 DSMRPHIIPQPRPYYKWSDALVPDVWFDAVAVWEVKAADLSISPVHKAAVGLVDPSKGIS 602
Query: 66 IRFPRVTKIRDDKDWKTATNLPELKVLFK 94
IRFPR+ ++R+DK + AT+ ++ +F+
Sbjct: 603 IRFPRLIRVREDKSPEDATSAAQVAEMFR 631
>gi|22671504|gb|AAN04331.1|AF451898_35 DNA ligase III [Heliothis zea virus 1]
Length = 1411
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/32 (68%), Positives = 26/32 (81%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
E KYDGERVQ+HK ++FKY+SRSLK V E K
Sbjct: 1070 EYKYDGERVQIHKSRSDFKYYSRSLKCVPEKK 1101
Score = 40.8 bits (94), Expect = 0.097, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 7/55 (12%)
Query: 38 LEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVL 92
L+ K PV E+ E + + +S RFPRV +IR DKDW T+L +K L
Sbjct: 1340 LDPKQMPVLEVLCTELTAS-------LSFRFPRVIRIRSDKDWTGVTSLRYIKEL 1387
>gi|370703040|ref|YP_004956842.1| orf94 gene product [Helicoverpa zea nudivirus 2]
gi|365199637|gb|AEW69643.1| DNA ligase [Helicoverpa zea nudivirus 2]
Length = 1953
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/32 (68%), Positives = 26/32 (81%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSRSLKPVLEHK 41
E KYDGERVQ+HK ++FKY+SRSLK V E K
Sbjct: 1612 EYKYDGERVQIHKSRSDFKYYSRSLKCVPEKK 1643
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 7/55 (12%)
Query: 38 LEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVL 92
L+ K PV E+ E + + +S RFPRV +IR DKDW T+L +K L
Sbjct: 1882 LDPKQMPVLEVLCTELTAS-------LSFRFPRVIRIRSDKDWTGVTSLRYIKEL 1929
>gi|320167046|gb|EFW43945.1| ATP dependent DNA ligase [Capsaspora owczarzaki ATCC 30864]
Length = 1559
Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 10/83 (12%)
Query: 23 KGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTA----------DGISIRFPRVT 72
K + S L+P + + VWEI GA+ + + ++TA GIS+RFPR
Sbjct: 1474 KAKPYYVVSPQLQPDVWFEPCQVWEIRGADLTLSPVYTAAAGLIEEQPDRGISLRFPRFL 1533
Query: 73 KIRDDKDWKTATNLPELKVLFKK 95
++R DK + AT EL +F++
Sbjct: 1534 RVRTDKSTEDATTPSELADMFRR 1556
>gi|392575755|gb|EIW68887.1| hypothetical protein TREMEDRAFT_31295 [Tremella mesenterica DSM
1558]
Length = 824
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Query: 29 YFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDW 80
Y + L+P + VWEI GA+ + + ++ A G+S+RFPR ++RDDK W
Sbjct: 707 YDTGGLRPDVWFAPSEVWEIRGADITLSPVYPAGASLLGGERGLSVRFPRFIRVRDDKGW 766
Query: 81 KTATNLPELKVLFKK 95
+ A+ + ++++
Sbjct: 767 EQASTSEQFADMYRR 781
>gi|321249873|ref|XP_003191605.1| DNA ligase [Cryptococcus gattii WM276]
gi|317458072|gb|ADV19818.1| DNA ligase, putative [Cryptococcus gattii WM276]
Length = 945
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 8/83 (9%)
Query: 31 SRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKT 82
+ L P + + VWEI GA+ + + ++ A G+S+RFPR ++RDDK W+
Sbjct: 862 TNGLIPDVWFEPSEVWEIKGADITLSPVYPAASSHLGSERGLSVRFPRFIRMRDDKKWED 921
Query: 83 ATNLPELKVLFKKSKETSDFTLK 105
A +L ++++ + S+ T K
Sbjct: 922 AMTSDQLADMYRRQMKESETTTK 944
>gi|196017042|ref|XP_002118368.1| hypothetical protein TRIADDRAFT_34086 [Trichoplax adhaerens]
gi|190579027|gb|EDV19135.1| hypothetical protein TRIADDRAFT_34086 [Trichoplax adhaerens]
Length = 707
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 8/87 (9%)
Query: 19 QVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPR 70
Q +K + + S++P +A VWE+ A+ S + +H A GIS+RFPR
Sbjct: 605 QTIEKPKSYYRYDSSVQPDHWFEAVQVWEVKVADLSISPVHKAAAGIVDPEKGISLRFPR 664
Query: 71 VTKIRDDKDWKTATNLPELKVLFKKSK 97
+IRDDK + AT ++ VL++ +
Sbjct: 665 FLRIRDDKKPEEATTASQVAVLYRSQQ 691
>gi|328871756|gb|EGG20126.1| DNA ligase I [Dictyostelium fasciculatum]
Length = 929
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 8/78 (10%)
Query: 31 SRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKT 82
S +LKP + VWE+ A+ S + IHTA GI++RFPR +IR DK+ +
Sbjct: 844 SDNLKPDVWFNPSQVWEVLAADLSISPIHTAAVGVLDPNKGIALRFPRFIQIRKDKNPED 903
Query: 83 ATNLPELKVLFKKSKETS 100
AT ++ ++K K S
Sbjct: 904 ATTASQIVDMYKNQKINS 921
>gi|383852354|ref|XP_003701693.1| PREDICTED: DNA ligase 1-like [Megachile rotundata]
Length = 831
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 12/74 (16%)
Query: 30 FSRSLKPVLEHKAQPV--WEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKD 79
+ SL+P +H +PV WEI A+ S + +H A GIS+RFPR +IRDDK+
Sbjct: 739 YDSSLQP--DHWFEPVQVWEIKCADLSLSPVHKAAVGIVDPEKGISLRFPRFIRIRDDKN 796
Query: 80 WKTATNLPELKVLF 93
+ AT+ ++ ++
Sbjct: 797 SEDATSAQQVATMY 810
>gi|396080968|gb|AFN82588.1| DNA ligase [Encephalitozoon romaleae SJ-2008]
Length = 589
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Query: 30 FSRSLKPVLEHKAQPVWEISGAEFSQAEIHTADG------ISIRFPRVTKIRDDKDWKTA 83
+ S+KP + +A+ VWE+ A S + I+ A G IS+RFPR + RDDKD K
Sbjct: 508 YKESIKPDVWVEAKYVWEVRAAGMSLSPIYNAGGSRNGKGISLRFPRFIRERDDKDVKEV 567
Query: 84 TNLPELKVLFKKSK 97
T ++ ++ SK
Sbjct: 568 TTSSQIYQMYLDSK 581
Score = 37.7 bits (86), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 2 AKNERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
+++R E KYDGERVQ+H+ GN + FSR+
Sbjct: 246 VEDKRFACEYKYDGERVQIHRFGNNIETFSRN 277
>gi|194885762|ref|XP_001976489.1| GG22898 [Drosophila erecta]
gi|190659676|gb|EDV56889.1| GG22898 [Drosophila erecta]
Length = 747
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 12/75 (16%)
Query: 30 FSRSLKPVLEHKAQPV--WEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKD 79
+ +SL+P +H +PV WE+ A+ S + IH A GIS+RFPR +IRDDK+
Sbjct: 653 YDQSLEP--DHWFEPVQVWEVKCADLSLSPIHRAAIGIVDGERGISLRFPRFIRIRDDKN 710
Query: 80 WKTATNLPELKVLFK 94
+ AT+ ++ +++
Sbjct: 711 SENATDANQVAHMYQ 725
>gi|218184789|gb|EEC67216.1| hypothetical protein OsI_34114 [Oryza sativa Indica Group]
gi|222613048|gb|EEE51180.1| hypothetical protein OsJ_31972 [Oryza sativa Japonica Group]
Length = 627
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 47/89 (52%), Gaps = 8/89 (8%)
Query: 17 RVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRF 68
R + K + F+ ++ P + + VWE+ A+ S + +H A GIS+RF
Sbjct: 525 RTKAIPKPKAYYRFADTMDPDVWFEPSEVWEVKAADLSISPVHRAANGIVDPNKGISLRF 584
Query: 69 PRVTKIRDDKDWKTATNLPELKVLFKKSK 97
PR+ ++RDDK+ + AT ++ +++ K
Sbjct: 585 PRLLRVRDDKNPEQATTSEQVADMYRAQK 613
>gi|194754293|ref|XP_001959430.1| GF12871 [Drosophila ananassae]
gi|190620728|gb|EDV36252.1| GF12871 [Drosophila ananassae]
Length = 749
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 12/75 (16%)
Query: 30 FSRSLKPVLEHKAQPV--WEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKD 79
+ SL+P +H +PV WEI A+ S + IH A GIS+RFPR +IRDDK+
Sbjct: 655 YDSSLEP--DHWFEPVQVWEIKCADLSLSPIHRAAIGIVDGERGISLRFPRFIRIRDDKN 712
Query: 80 WKTATNLPELKVLFK 94
+ AT+ ++ +++
Sbjct: 713 SENATDANQVAHMYQ 727
>gi|68070421|ref|XP_677122.1| DNA ligase 1 [Plasmodium berghei strain ANKA]
gi|56497113|emb|CAH97995.1| DNA ligase 1, putative [Plasmodium berghei]
Length = 897
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 31 SRSLKPVLEHKAQPVWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDWKT 82
S L P + A VWEI A+ S + +HTA GI +RFPR ++RDDK+ +
Sbjct: 806 SDKLNPDVWFDAHYVWEIKAADLSLSPVHTAAIGVYSDDKGIGLRFPRFLRLRDDKNPEQ 865
Query: 83 AT 84
AT
Sbjct: 866 AT 867
>gi|16905197|gb|AAL31067.1|AC090120_13 putative DNA ligase [Oryza sativa Japonica Group]
gi|31432783|gb|AAP54376.1| DNA ligase, putative, expressed [Oryza sativa Japonica Group]
gi|40539108|gb|AAR87364.1| putative DNA ligase [Oryza sativa Japonica Group]
Length = 810
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 47/89 (52%), Gaps = 8/89 (8%)
Query: 17 RVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRF 68
R + K + F+ ++ P + + VWE+ A+ S + +H A GIS+RF
Sbjct: 708 RTKAIPKPKAYYRFADTMDPDVWFEPSEVWEVKAADLSISPVHRAANGIVDPNKGISLRF 767
Query: 69 PRVTKIRDDKDWKTATNLPELKVLFKKSK 97
PR+ ++RDDK+ + AT ++ +++ K
Sbjct: 768 PRLLRVRDDKNPEQATTSEQVADMYRAQK 796
>gi|384249290|gb|EIE22772.1| ATP-dependent DNA ligase, partial [Coccomyxa subellipsoidea C-169]
Length = 643
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 9/80 (11%)
Query: 18 VQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTA--------DGISIRFP 69
+ H+ Y+S + +P + + VWE+ GA+ + + +H A G+S+RFP
Sbjct: 549 ISFHRIEGPRPYYSTNERPSVWFEPTEVWELRGADLTLSAVHKAAFGLIHPTRGVSLRFP 608
Query: 70 RVTKIRDDKDWKTATNLPEL 89
R ++RDDK + A+ PE+
Sbjct: 609 RFVRLRDDKRPEEAST-PEV 627
>gi|71023511|ref|XP_761985.1| hypothetical protein UM05838.1 [Ustilago maydis 521]
gi|46101550|gb|EAK86783.1| hypothetical protein UM05838.1 [Ustilago maydis 521]
Length = 892
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%), Gaps = 7/83 (8%)
Query: 19 QVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD-------GISIRFPRV 71
Q+ G + Y KP + +A+ VWE+ A+ S + ++TA GIS+RFPR
Sbjct: 790 QLEISGKKGYYDVGEAKPDVYFEAKVVWEVLTADLSLSPVYTAAKGLVDQRGISLRFPRF 849
Query: 72 TKIRDDKDWKTATNLPELKVLFK 94
+IRDDK + +T+ +++ +++
Sbjct: 850 IRIRDDKTAEESTSPEQIEAMYR 872
>gi|380029885|ref|XP_003698595.1| PREDICTED: DNA ligase 1-like, partial [Apis florea]
Length = 672
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 12/84 (14%)
Query: 30 FSRSLKPVLEHKAQP--VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKD 79
+ SL+P +H +P VWEI A+ S + +H A GIS+RFPR +IRDDK+
Sbjct: 580 YDSSLEP--DHWFEPIQVWEIKCADLSLSPVHKAAVGIVDPEKGISLRFPRFVRIRDDKN 637
Query: 80 WKTATNLPELKVLFKKSKETSDFT 103
AT+ ++ ++ ++ + T
Sbjct: 638 SDDATSAQQVASMYNNQEQIKNQT 661
>gi|224106842|ref|XP_002314303.1| predicted protein [Populus trichocarpa]
gi|222850711|gb|EEE88258.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 17 RVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRF 68
R QV K + F ++KP + + + VWE+ A+ + + +H A GIS+RF
Sbjct: 582 RSQVIPKPKSYYRFGDTIKPDVWFEPKEVWEVKAADLTISPVHRAAIGEVDPNKGISLRF 641
Query: 69 PRVTKIRDDKDWKTATNLPELKVLFKKSK 97
PR+ ++R+DK + A++ ++ ++ K
Sbjct: 642 PRLVRVREDKSPEQASSSEQVAEMYNAQK 670
>gi|198456070|ref|XP_001360228.2| GA18999 [Drosophila pseudoobscura pseudoobscura]
gi|198135509|gb|EAL24802.2| GA18999 [Drosophila pseudoobscura pseudoobscura]
Length = 744
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 46/78 (58%), Gaps = 13/78 (16%)
Query: 27 FKYFSRSLKPVLEHKAQP--VWEISGAEFSQAEIH--------TADGISIRFPRVTKIRD 76
F+Y S SL+P +H +P VWE+ A+ S + IH T GIS+RFPR +IRD
Sbjct: 648 FRYDS-SLEP--DHWFEPAQVWEVKCADLSLSPIHRAAIGIVDTERGISLRFPRFIRIRD 704
Query: 77 DKDWKTATNLPELKVLFK 94
DK + AT+ ++ +++
Sbjct: 705 DKSSENATDANQVAHMYQ 722
>gi|195149365|ref|XP_002015628.1| GL11174 [Drosophila persimilis]
gi|194109475|gb|EDW31518.1| GL11174 [Drosophila persimilis]
Length = 744
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 46/78 (58%), Gaps = 13/78 (16%)
Query: 27 FKYFSRSLKPVLEHKAQP--VWEISGAEFSQAEIH--------TADGISIRFPRVTKIRD 76
F+Y S SL+P +H +P VWE+ A+ S + IH T GIS+RFPR +IRD
Sbjct: 648 FRYDS-SLEP--DHWFEPAQVWEVKCADLSLSPIHRAAIGIVDTERGISLRFPRFIRIRD 704
Query: 77 DKDWKTATNLPELKVLFK 94
DK + AT+ ++ +++
Sbjct: 705 DKSSENATDANQVAHMYQ 722
>gi|83033053|ref|XP_729309.1| DNA ligase 1 [Plasmodium yoelii yoelii 17XNL]
gi|23486709|gb|EAA20874.1| DNA ligase 1 [Plasmodium yoelii yoelii]
Length = 826
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 31 SRSLKPVLEHKAQPVWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDWKT 82
S L P + A VWEI A+ S + +HTA GI +RFPR ++RDDK+ +
Sbjct: 735 SDKLNPDVWFDAHYVWEIKAADLSLSPVHTAAIGVYSDDKGIGLRFPRFLRLRDDKNPEQ 794
Query: 83 AT 84
AT
Sbjct: 795 AT 796
>gi|70947733|ref|XP_743454.1| DNA ligase 1 [Plasmodium chabaudi chabaudi]
gi|56522958|emb|CAH76291.1| DNA ligase 1, putative [Plasmodium chabaudi chabaudi]
Length = 433
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 31 SRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKT 82
S L P + A VWEI A+ S + +HTA GI +RFPR ++RDDK+ +
Sbjct: 343 SDKLNPDVWFDAHYVWEIKAADLSLSPVHTAAIGVYSDDKGIGLRFPRFLRLRDDKNPEQ 402
Query: 83 AT 84
AT
Sbjct: 403 AT 404
>gi|328780199|ref|XP_392286.4| PREDICTED: DNA ligase 1-like [Apis mellifera]
Length = 677
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 12/79 (15%)
Query: 30 FSRSLKPVLEHKAQP--VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKD 79
+ SL+P +H +P VWEI A+ S + +H A GIS+RFPR +IRDDK+
Sbjct: 586 YDSSLEP--DHWFEPIQVWEIKCADLSLSPVHKAAIGIVDPEKGISLRFPRFVRIRDDKN 643
Query: 80 WKTATNLPELKVLFKKSKE 98
AT+ ++ ++ ++
Sbjct: 644 SDDATSAQQVASMYNNQEQ 662
>gi|209881935|ref|XP_002142405.1| DNA ligase I, ATP-dependent family protein [Cryptosporidium muris
RN66]
gi|209558011|gb|EEA08056.1| DNA ligase I, ATP-dependent family protein [Cryptosporidium muris
RN66]
Length = 820
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 8/71 (11%)
Query: 31 SRSLKPVLEHKAQPVWEISGAEFSQAEIHT--------ADGISIRFPRVTKIRDDKDWKT 82
S SLKP + + + +WE+ GA+ S + +H GI +RFPR +IR+DK +
Sbjct: 723 SISLKPDVWFEPKFIWEVKGADLSLSPVHNTAFGIREEGKGIGLRFPRFIRIREDKKPED 782
Query: 83 ATNLPELKVLF 93
AT ++ LF
Sbjct: 783 ATTCDQIIDLF 793
>gi|429964388|gb|ELA46386.1| DNA ligase I, ATP-dependent (dnl1) [Vavraia culicis 'floridensis']
Length = 660
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 16 ERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIR 75
+++ V K + +S S P L + V+E++ A S + ++T G+S+RFPR KIR
Sbjct: 578 DKLNVSKSVPKLYKYSDSSTPDLWIDPEYVFEVNAASISNSPLYTT-GLSLRFPRFIKIR 636
Query: 76 DDKDWKTATNLPELKVLFKK 95
+DK + AT L +K++ +K
Sbjct: 637 EDKRIEDATTLSYIKLMTRK 656
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 22/24 (91%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSRS 33
E+KYDGER+Q+HKK ++ K++SR+
Sbjct: 246 EVKYDGERIQIHKKDDQVKFYSRN 269
>gi|320170916|gb|EFW47815.1| ligase I [Capsaspora owczarzaki ATCC 30864]
Length = 981
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 8/61 (13%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
VWE+ A+ S + +H A GIS+RFPR +IRDDK + ATN ++ +++
Sbjct: 905 VWEVKAADLSISPVHKAAAGLVDPEKGISLRFPRFLRIRDDKSTEQATNASQVADMYRSQ 964
Query: 97 K 97
+
Sbjct: 965 Q 965
>gi|195122766|ref|XP_002005882.1| GI20719 [Drosophila mojavensis]
gi|193910950|gb|EDW09817.1| GI20719 [Drosophila mojavensis]
Length = 736
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 10/94 (10%)
Query: 10 EIKYDGERVQVHKKGNEFKYF--SRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD----- 62
+++ E + H + YF SL+P + VWE+ A+ S + IH A
Sbjct: 620 DLRQHSEFLSAHVISSAKSYFRYDPSLEPDAWFEPVQVWEVKCADLSLSPIHRAAIGAVD 679
Query: 63 ---GISIRFPRVTKIRDDKDWKTATNLPELKVLF 93
GIS+RFPR +IRDDK + AT+ ++ +++
Sbjct: 680 PERGISLRFPRFIRIRDDKSPENATDANQVSLMY 713
>gi|159489817|ref|XP_001702891.1| DNA ligase [Chlamydomonas reinhardtii]
gi|158271019|gb|EDO96848.1| DNA ligase [Chlamydomonas reinhardtii]
Length = 813
Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
Query: 30 FSRSLKPVLEHKAQPVWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDWK 81
+ SL P + A VWE+ A+ S + H A GISIRFPR+ ++RDDK +
Sbjct: 727 WDESLVPDVWFDAAVVWEVKAADLSISPRHKAALGLVDPTKGISIRFPRLIRVRDDKSPE 786
Query: 82 TATNLPELKVLFK 94
AT+ ++ +F+
Sbjct: 787 DATSAAQVADMFR 799
>gi|66359502|ref|XP_626929.1| DNA LIGASE I [Cryptosporidium parvum Iowa II]
gi|46228073|gb|EAK88972.1| DNA LIGASE I [Cryptosporidium parvum Iowa II]
Length = 825
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 8/49 (16%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATN 85
VWE+ GA+ S + +HTA GI +RFPR +IRDDK + AT+
Sbjct: 745 VWEVKGADLSLSPVHTAAIGTIDENRGIGLRFPRFIRIRDDKSPEQATS 793
>gi|340711651|ref|XP_003394386.1| PREDICTED: DNA ligase 1-like [Bombus terrestris]
Length = 925
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 12/84 (14%)
Query: 30 FSRSLKPVLEHKAQPV--WEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKD 79
+ SL+P +H +PV WEI A+ S + +H A GIS+RFPR +IRDDK+
Sbjct: 833 YDSSLEP--DHWFEPVQVWEIKCADLSLSPVHKAAVGIIDPEKGISLRFPRFVRIRDDKN 890
Query: 80 WKTATNLPELKVLFKKSKETSDFT 103
+ AT+ ++ ++ ++ + T
Sbjct: 891 NEDATSAQQIADMYNSQEQIKNQT 914
>gi|330790648|ref|XP_003283408.1| hypothetical protein DICPUDRAFT_25751 [Dictyostelium purpureum]
gi|325086673|gb|EGC40059.1| hypothetical protein DICPUDRAFT_25751 [Dictyostelium purpureum]
Length = 648
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 48/86 (55%), Gaps = 9/86 (10%)
Query: 20 VHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRV 71
+++ N F+ S S+KP + VWE+ A+ S + +HTA GI++RFPR
Sbjct: 548 INQPRNMFR-ISDSIKPDVWLSPSQVWEVLAADLSISPVHTAAYGNLESNKGIALRFPRF 606
Query: 72 TKIRDDKDWKTATNLPELKVLFKKSK 97
+ R+DK + AT+ ++ ++++ K
Sbjct: 607 IRTREDKSPEDATSSEQVVLMYQNQK 632
>gi|357140737|ref|XP_003571920.1| PREDICTED: DNA ligase 1-like [Brachypodium distachyon]
Length = 918
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 8/89 (8%)
Query: 17 RVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRF 68
R +V K + F+ + P + + VWE+ A+ S + +H A GIS+RF
Sbjct: 815 RSKVISKPKAYYRFADTTDPDVWFEPSEVWEVKAADLSISPVHRAANGIVDPNKGISLRF 874
Query: 69 PRVTKIRDDKDWKTATNLPELKVLFKKSK 97
PR+ ++RDDK+ + AT ++ +++ K
Sbjct: 875 PRLLRVRDDKNPEHATTSEQVADMYRAQK 903
>gi|291231955|ref|XP_002735927.1| PREDICTED: DNA ligase (ATP) 1-like [Saccoglossus kowalevskii]
Length = 857
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 8/67 (11%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
VWEI A+ S + +H A GIS+RFPR +IRDDK + AT+ ++ +++K
Sbjct: 779 VWEIKAADLSISPVHKAGAGIVDPEKGISLRFPRFLRIRDDKKPEEATSASQVADMYRKQ 838
Query: 97 KETSDFT 103
+ + T
Sbjct: 839 DQVMNNT 845
>gi|393245067|gb|EJD52578.1| ATP-dependent DNA ligase [Auricularia delicata TFB-10046 SS5]
Length = 795
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 9/75 (12%)
Query: 34 LKPVLEHKAQPVWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDWKTATN 85
L+P + K + VWEI GA+ + + + A G+S+RFPR ++RDDK + A+
Sbjct: 693 LRPEVFFKPREVWEIKGADITLSPVSVAAYGLVSSERGLSLRFPRFIRLRDDKSVEHASE 752
Query: 86 LPELKVLFKKSKETS 100
PE V KS+E +
Sbjct: 753 -PETLVRMWKSQERT 766
>gi|449329253|gb|AGE95526.1| DNA ligase [Encephalitozoon cuniculi]
Length = 589
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 30 FSRSLKPVLEHKAQPVWEISGAEFSQAEIHTA------DGISIRFPRVTKIRDDKDWKTA 83
+ S+KP + +A+ VWE+ A S + I++A GIS+RFPR + RDDKD + A
Sbjct: 508 YKESVKPDVWVEAKYVWEVRAAGISLSPIYSAAWSKGEKGISLRFPRFIRERDDKDVREA 567
Query: 84 TNLPELKVLFKKSK 97
T + ++ SK
Sbjct: 568 TTSSQAYQMYLDSK 581
>gi|405117922|gb|AFR92697.1| DNA ligase [Cryptococcus neoformans var. grubii H99]
Length = 877
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
Query: 31 SRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKT 82
+ L P + + VWEI GA+ + + ++ A G+S+RFPR ++RDDK W+
Sbjct: 795 TNGLIPDVWFEPSEVWEIKGADITLSPVYPAASSHLGSERGLSVRFPRFIRVRDDKTWED 854
Query: 83 ATNLPELKVLFKK 95
A +L ++++
Sbjct: 855 AMTSDQLADMYRR 867
>gi|388579226|gb|EIM19552.1| ATP-dependent DNA ligase [Wallemia sebi CBS 633.66]
Length = 643
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 7/60 (11%)
Query: 33 SLKPVLEHKAQPVWEISGAEFSQAEIHTAD-------GISIRFPRVTKIRDDKDWKTATN 85
S KP + + Q VWE+ A+ S + ++TA GIS+RFPR ++RDDK AT+
Sbjct: 574 SAKPDVYFEPQAVWEVLTADLSLSPVYTAAAGEISERGISLRFPRFIRVRDDKAADDATS 633
>gi|19074041|ref|NP_584647.1| DNA LIGASE [Encephalitozoon cuniculi GB-M1]
gi|19068683|emb|CAD25151.1| DNA LIGASE [Encephalitozoon cuniculi GB-M1]
Length = 589
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 30 FSRSLKPVLEHKAQPVWEISGAEFSQAEIHTA------DGISIRFPRVTKIRDDKDWKTA 83
+ S+KP + +A+ VWE+ A S + I++A GIS+RFPR + RDDKD + A
Sbjct: 508 YKESVKPDVWVEAKYVWEVRAAGISLSPIYSAAWSKGEKGISLRFPRFIRERDDKDVREA 567
Query: 84 TNLPELKVLFKKSK 97
T + ++ SK
Sbjct: 568 TTSSQAYQMYLDSK 581
>gi|350411865|ref|XP_003489474.1| PREDICTED: LOW QUALITY PROTEIN: DNA ligase 1-like [Bombus
impatiens]
Length = 945
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 12/84 (14%)
Query: 30 FSRSLKPVLEHKAQPV--WEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKD 79
+ SL+P +H +PV WEI A+ S + +H A GIS+RFPR +IRDDK+
Sbjct: 853 YDSSLEP--DHWFEPVQVWEIKCADLSLSPVHKAAVGIIDPEKGISLRFPRFVRIRDDKN 910
Query: 80 WKTATNLPELKVLFKKSKETSDFT 103
+ AT+ ++ ++ ++ + T
Sbjct: 911 NEDATSAQQVANMYNSQEQIKNQT 934
>gi|256079975|ref|XP_002576259.1| DNA ligase IV [Schistosoma mansoni]
gi|353230062|emb|CCD76233.1| putative DNA ligase IV [Schistosoma mansoni]
Length = 848
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 50/82 (60%), Gaps = 4/82 (4%)
Query: 41 KAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKSK--- 97
++ V ++ GAE Q++ ++ GI++RFPRV IR DK+W+ + ++ EL L +++
Sbjct: 595 RSSLVLQLHGAELIQSDSYSC-GITLRFPRVVAIRHDKNWRDSLSMSELIKLNTETEGKL 653
Query: 98 ETSDFTLKPKYDRIKNLKLQKA 119
T ++ P + + +++ Q++
Sbjct: 654 ATKRLSIVPTFSGLADVEHQQS 675
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 20/24 (83%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSRS 33
E K+DGERVQ+HK N ++Y+SR+
Sbjct: 295 ETKFDGERVQLHKSSNSYRYWSRN 318
>gi|302780581|ref|XP_002972065.1| hypothetical protein SELMODRAFT_96808 [Selaginella moellendorffii]
gi|300160364|gb|EFJ26982.1| hypothetical protein SELMODRAFT_96808 [Selaginella moellendorffii]
Length = 610
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 8/81 (9%)
Query: 29 YFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDW 80
Y+ +P + A VWEI GA+++ + +H A GIS+RFPR R DK
Sbjct: 527 YYQTLERPDVWFAAAKVWEIRGADYTISPVHQAAAGLVHPDRGISLRFPRFVGERTDKSP 586
Query: 81 KTATNLPELKVLFKKSKETSD 101
+ AT+ EL LF D
Sbjct: 587 EDATSPSELVQLFNAQTRKVD 607
>gi|241830535|ref|XP_002414818.1| DNA ligase IV, putative [Ixodes scapularis]
gi|215509030|gb|EEC18483.1| DNA ligase IV, putative [Ixodes scapularis]
Length = 817
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 18/28 (64%), Positives = 24/28 (85%)
Query: 5 ERCYSEIKYDGERVQVHKKGNEFKYFSR 32
E ++E K+DGER+QVHKKG EF+YF+R
Sbjct: 271 EAFFAETKFDGERLQVHKKGGEFRYFTR 298
>gi|15292189|gb|AAK93363.1| LD41868p [Drosophila melanogaster]
Length = 720
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 12/75 (16%)
Query: 30 FSRSLKPVLEHKAQPV--WEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKD 79
+ SL+P +H +PV WE+ A+ S + IH A GIS+RFPR +IRDDK+
Sbjct: 626 YDPSLEP--DHWFEPVQVWEVKCADLSLSPIHRAAIGIVDGERGISLRFPRFIRIRDDKN 683
Query: 80 WKTATNLPELKVLFK 94
+ AT+ ++ +++
Sbjct: 684 SENATDANQVAHMYQ 698
>gi|195489363|ref|XP_002092706.1| GE14336 [Drosophila yakuba]
gi|194178807|gb|EDW92418.1| GE14336 [Drosophila yakuba]
Length = 747
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 12/75 (16%)
Query: 30 FSRSLKPVLEHKAQPV--WEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKD 79
+ SL+P +H +PV WE+ A+ S + IH A GIS+RFPR +IRDDK+
Sbjct: 653 YDPSLEP--DHWFEPVQVWEVKCADLSLSPIHRAAIGIVDGERGISLRFPRFIRIRDDKN 710
Query: 80 WKTATNLPELKVLFK 94
+ AT+ ++ +++
Sbjct: 711 SENATDANQVAHMYQ 725
>gi|409045002|gb|EKM54483.1| hypothetical protein PHACADRAFT_162874 [Phanerochaete carnosa
HHB-10118-sp]
Length = 790
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 27 FKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDK 78
++ + LKP + K Q VWEI GA+ + + + A G+S+RFPR ++ DDK
Sbjct: 682 YEVLTGGLKPQVYFKPQEVWEIRGADITISPVSVAALGMVSEARGLSLRFPRFIRVHDDK 741
Query: 79 DWKTATNLPELKVLFKKSKETSD 101
+ A+ PE +S++ D
Sbjct: 742 AVENAST-PEFLANMYRSQQGKD 763
>gi|255074177|ref|XP_002500763.1| predicted protein [Micromonas sp. RCC299]
gi|226516026|gb|ACO62021.1| predicted protein [Micromonas sp. RCC299]
Length = 654
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 16/82 (19%)
Query: 36 PVLEHKAQP--------VWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKD 79
PV + QP VWEI GA+ + + H A GIS+RFPR ++RDDK+
Sbjct: 526 PVYDTLEQPDVWFNPTEVWEIRGADLTLSPKHRAAAGARHEERGISLRFPRFIRVRDDKN 585
Query: 80 WKTATNLPELKVLFKKSKETSD 101
+ A+ E+ LF + D
Sbjct: 586 VEDASGPEEVARLFDAQQSRYD 607
>gi|195347251|ref|XP_002040167.1| GM16058 [Drosophila sechellia]
gi|194135516|gb|EDW57032.1| GM16058 [Drosophila sechellia]
Length = 747
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 12/75 (16%)
Query: 30 FSRSLKPVLEHKAQPV--WEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKD 79
+ SL+P +H +PV WE+ A+ S + IH A GIS+RFPR +IRDDK+
Sbjct: 653 YDPSLEP--DHWFEPVQVWEVKCADLSLSPIHRAAIGIVDGERGISLRFPRFIRIRDDKN 710
Query: 80 WKTATNLPELKVLFK 94
+ AT+ ++ +++
Sbjct: 711 SENATDANQVAHMYQ 725
>gi|24762424|ref|NP_611843.2| DNA ligase I [Drosophila melanogaster]
gi|75027832|sp|Q9W1H4.2|DNLI1_DROME RecName: Full=DNA ligase 1; AltName: Full=DNA ligase I; Short=DmDNA
Lig I
gi|23240139|gb|AAF47090.3| DNA ligase I [Drosophila melanogaster]
gi|54650818|gb|AAV36988.1| LD20955p [Drosophila melanogaster]
Length = 747
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 12/75 (16%)
Query: 30 FSRSLKPVLEHKAQPV--WEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKD 79
+ SL+P +H +PV WE+ A+ S + IH A GIS+RFPR +IRDDK+
Sbjct: 653 YDPSLEP--DHWFEPVQVWEVKCADLSLSPIHRAAIGIVDGERGISLRFPRFIRIRDDKN 710
Query: 80 WKTATNLPELKVLFK 94
+ AT+ ++ +++
Sbjct: 711 SENATDANQVAHMYQ 725
>gi|389585979|dbj|GAB68708.1| DNA ligase 1 precursor [Plasmodium cynomolgi strain B]
Length = 920
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 31 SRSLKPVLEHKAQPVWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDWKT 82
S L P + A VWE+ A+ S + +HTA GI +RFPR ++R+DK+ +
Sbjct: 830 SDKLNPDVWFDAHYVWEVKAADLSLSPVHTAAIGVYSDDKGIGLRFPRFLRLREDKNAEQ 889
Query: 83 ATNLPEL----KVLFKKSKETSDF 102
AT ++ + F +K +DF
Sbjct: 890 ATTSQQIVDFYEAQFTNNKNKNDF 913
>gi|12597768|gb|AAG60081.1|AC013288_15 DNA ligase I, putative [Arabidopsis thaliana]
Length = 1417
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 11/72 (15%)
Query: 29 YFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPR-VTKI--RDD 77
Y+ P + A+ VWEI GA+F+ + +H+A GIS+RFPR ++K+ R+
Sbjct: 1332 YYRTGETPDMWFSAEVVWEIRGADFTVSPVHSASLGLVHPSRGISVRFPRFISKVTDRNP 1391
Query: 78 KDWKTATNLPEL 89
++ TAT++ E+
Sbjct: 1392 EECSTATDIAEM 1403
>gi|195586207|ref|XP_002082869.1| GD11806 [Drosophila simulans]
gi|194194878|gb|EDX08454.1| GD11806 [Drosophila simulans]
Length = 713
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 12/75 (16%)
Query: 30 FSRSLKPVLEHKAQPV--WEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKD 79
+ SL+P +H +PV WE+ A+ S + IH A GIS+RFPR +IRDDK+
Sbjct: 619 YDPSLEP--DHWFEPVQVWEVKCADLSLSPIHRAAIGIVDGERGISLRFPRFIRIRDDKN 676
Query: 80 WKTATNLPELKVLFK 94
+ AT+ ++ +++
Sbjct: 677 SENATDANQVAHMYQ 691
>gi|195431541|ref|XP_002063795.1| GK15713 [Drosophila willistoni]
gi|194159880|gb|EDW74781.1| GK15713 [Drosophila willistoni]
Length = 744
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
Query: 30 FSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWK 81
+ SL+P + VWE+ A+ S + IH A GIS+RFPR +IRDDK +
Sbjct: 650 YDSSLEPDAWFEPVQVWEVKCADLSLSPIHRAAIGIVDNERGISLRFPRFIRIRDDKSSE 709
Query: 82 TATNLPELKVLFK 94
AT+ ++ +++
Sbjct: 710 NATDAQQVANMYQ 722
>gi|195358469|ref|XP_002045213.1| GM13668 [Drosophila sechellia]
gi|194123258|gb|EDW45301.1| GM13668 [Drosophila sechellia]
Length = 656
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 12/75 (16%)
Query: 30 FSRSLKPVLEHKAQPV--WEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKD 79
+ SL+P +H +PV WE+ A+ S + IH A GIS+RFPR +IRDDK+
Sbjct: 562 YDPSLEP--DHWFEPVQVWEVKCADLSLSPIHRAAIGIVDGERGISLRFPRFIRIRDDKN 619
Query: 80 WKTATNLPELKVLFK 94
+ AT+ ++ +++
Sbjct: 620 SENATDANQVAHMYQ 634
>gi|334183682|ref|NP_176845.2| DNA ligase 6 [Arabidopsis thaliana]
gi|332196428|gb|AEE34549.1| DNA ligase 6 [Arabidopsis thaliana]
Length = 1396
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 11/72 (15%)
Query: 29 YFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPR-VTKI--RDD 77
Y+ P + A+ VWEI GA+F+ + +H+A GIS+RFPR ++K+ R+
Sbjct: 1311 YYRTGETPDMWFSAEVVWEIRGADFTVSPVHSASLGLVHPSRGISVRFPRFISKVTDRNP 1370
Query: 78 KDWKTATNLPEL 89
++ TAT++ E+
Sbjct: 1371 EECSTATDIAEM 1382
>gi|187608350|ref|NP_001119860.1| DNA ligase 1 [Danio rerio]
Length = 1058
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 8/83 (9%)
Query: 32 RSLKPVLEHKAQPVWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDWKTA 83
+S +P + +A VWE+ A+ S + ++ A GIS+RFPR +IRDDK + A
Sbjct: 970 QSAEPDVWLEAVQVWEVKCADLSLSPVYKAAMGLVDPEKGISLRFPRFLRIRDDKKPEDA 1029
Query: 84 TNLPELKVLFKKSKETSDFTLKP 106
T ++ L+KK ++ + KP
Sbjct: 1030 TTGSQIADLYKKQQQIQNQGDKP 1052
>gi|118379613|ref|XP_001022972.1| DNA ligase I [Tetrahymena thermophila]
gi|89304739|gb|EAS02727.1| DNA ligase I [Tetrahymena thermophila SB210]
Length = 816
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%), Gaps = 8/65 (12%)
Query: 29 YFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDW 80
Y ++ K + K VWEI GA+ + ++T GI +RFPR+ ++RDDKD
Sbjct: 727 YLTKDFKADVWFKPSVVWEIKGADLQISPVYTCAISETNQEKGIGLRFPRLIRVRDDKDP 786
Query: 81 KTATN 85
AT+
Sbjct: 787 VDATS 791
>gi|391328687|ref|XP_003738816.1| PREDICTED: DNA ligase 1-like [Metaseiulus occidentalis]
Length = 854
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 8/70 (11%)
Query: 33 SLKPVLEHKAQPVWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDWKTAT 84
SL+P A VWEI A+ S + +H A GIS+RFPR +IRDDK+ + AT
Sbjct: 768 SLQPDDWFDAVQVWEIKCADLSISPLHRAAVGLVDPEKGISLRFPRFIRIRDDKNPEDAT 827
Query: 85 NLPELKVLFK 94
+ ++ +++
Sbjct: 828 SAEQIASMYR 837
>gi|401825510|ref|XP_003886850.1| DNA ligase [Encephalitozoon hellem ATCC 50504]
gi|392998006|gb|AFM97869.1| DNA ligase [Encephalitozoon hellem ATCC 50504]
Length = 589
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Query: 30 FSRSLKPVLEHKAQPVWEISGAEFSQAEIHTADG------ISIRFPRVTKIRDDKDWKTA 83
+ S+KP + +A+ VWE+ A S + I+ A G IS+RFPR + RDDK K A
Sbjct: 508 YKESVKPDVWVEAKYVWEVRAAGMSLSPIYNAGGSRNGKGISLRFPRFIRERDDKGVKEA 567
Query: 84 TNLPELKVLFKKSK 97
T ++ ++ SK
Sbjct: 568 TTSSQVYQMYLDSK 581
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 2 AKNERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
+N+ E KYDGERVQ+HK G+ + FSR+
Sbjct: 246 VENKSFACEYKYDGERVQIHKFGSSIETFSRN 277
>gi|221060727|ref|XP_002261933.1| DNA ligase 1 [Plasmodium knowlesi strain H]
gi|193811083|emb|CAQ41811.1| DNA ligase 1, putative [Plasmodium knowlesi strain H]
Length = 924
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 12/85 (14%)
Query: 31 SRSLKPVLEHKAQPVWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDWKT 82
S L P + A VWE+ A+ S + +HTA GI +RFPR ++R+DK+ +
Sbjct: 834 SDKLNPDVWFDAHYVWEVKAADLSLSPVHTAAIGVYSDDKGIGLRFPRFLRLREDKNAEQ 893
Query: 83 ATNLPELKVL----FKKSKETSDFT 103
AT ++ L F +K +DF
Sbjct: 894 ATTSQQIVDLYEAQFTYNKNKNDFN 918
>gi|395334355|gb|EJF66731.1| ATP-dependent DNA ligase [Dichomitus squalens LYAD-421 SS1]
Length = 834
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 9/85 (10%)
Query: 18 VQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD-------GISIRFPR 70
++VH + K KP + + + VWE+ A+ S + I+TA GIS+RFPR
Sbjct: 730 LEVHAPRGDIKI--GGAKPDVWFEPKVVWEVLTADLSLSPIYTAAQGLVEERGISLRFPR 787
Query: 71 VTKIRDDKDWKTATNLPELKVLFKK 95
KIR+DKD AT ++ ++++
Sbjct: 788 FIKIREDKDADDATGPEQIAEMYQR 812
>gi|388581891|gb|EIM22198.1| ATP-dependent DNA ligase [Wallemia sebi CBS 633.66]
Length = 943
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 9/64 (14%)
Query: 43 QP--VWEISGAEFSQAEIHTAD-------GISIRFPRVTKIRDDKDWKTATNLPELKVLF 93
QP VWE GA+ +Q+ ++ A G+SIRFPR ++R+DKD + A +L ++
Sbjct: 878 QPSEVWECRGADITQSPVYPAAKGRISDKGLSIRFPRFIRVREDKDVEQANTAADLASMY 937
Query: 94 KKSK 97
+K +
Sbjct: 938 EKQQ 941
>gi|428184512|gb|EKX53367.1| hypothetical protein GUITHDRAFT_161026 [Guillardia theta CCMP2712]
Length = 837
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
Query: 29 YFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDW 80
Y+ P +A VWEI GAE + + +H A G+++RFPR +IR DK
Sbjct: 733 YYITGENPSTWFEASEVWEIRGAELTASPVHMAAVGEGPEGRGLALRFPRFLRIRHDKTM 792
Query: 81 KTATNLPELKVLFK 94
+ A+ ++ LF+
Sbjct: 793 EEASTCEQVLDLFR 806
>gi|148368931|ref|YP_001257061.1| ligase [Spodoptera litura granulovirus]
gi|147883444|gb|ABQ52053.1| ligase [Spodoptera litura granulovirus]
Length = 579
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 25/49 (51%), Positives = 33/49 (67%), Gaps = 5/49 (10%)
Query: 44 PVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVL 92
PVWEI G +F I + + +SIR PR ++RDDK++ AT L ELKVL
Sbjct: 510 PVWEIQG-DF----IRSDNYVSIRLPRFIRVRDDKNFLQATRLFELKVL 553
>gi|58258919|ref|XP_566872.1| DNA ligase [Cryptococcus neoformans var. neoformans JEC21]
gi|134107043|ref|XP_777834.1| hypothetical protein CNBA5310 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260532|gb|EAL23187.1| hypothetical protein CNBA5310 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223009|gb|AAW41053.1| DNA ligase, putative [Cryptococcus neoformans var. neoformans
JEC21]
Length = 944
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 8/59 (13%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKK 95
VWEI GA+ + + ++ A G+S+RFPR ++RDDK W+ A +L ++++
Sbjct: 875 VWEIKGADITLSPVYPAASSHLGSERGLSVRFPRFIRMRDDKTWEDAMTSDQLADMYRR 933
>gi|303388481|ref|XP_003072475.1| DNA ligase [Encephalitozoon intestinalis ATCC 50506]
gi|303301615|gb|ADM11115.1| DNA ligase [Encephalitozoon intestinalis ATCC 50506]
Length = 589
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Query: 30 FSRSLKPVLEHKAQPVWEISGAEFSQAEIHTADG------ISIRFPRVTKIRDDKDWKTA 83
+ S+KP + +A+ VWE+ A S + I+ A G IS+RFPR + R+DKD K
Sbjct: 508 YKESVKPDVWVEAKYVWEVKAAGLSLSPIYNAGGNRNEKGISLRFPRFLREREDKDVKEV 567
Query: 84 TNLPELKVLFKKSK 97
T ++ ++ SK
Sbjct: 568 TTSSQIYQMYLDSK 581
Score = 38.1 bits (87), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 22/31 (70%), Gaps = 2/31 (6%)
Query: 3 KNERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
KN C E KYDGER+Q+HK GN + FSR+
Sbjct: 249 KNFTC--EYKYDGERIQIHKFGNRIETFSRN 277
>gi|198419782|ref|XP_002131274.1| PREDICTED: similar to DNA ligase IV [Ciona intestinalis]
Length = 632
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/24 (79%), Positives = 22/24 (91%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSRS 33
EIKYDGER Q+HK+GN +KYFSRS
Sbjct: 283 EIKYDGERSQLHKEGNRYKYFSRS 306
>gi|405965797|gb|EKC31151.1| DNA ligase 1 [Crassostrea gigas]
Length = 905
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 8/84 (9%)
Query: 19 QVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPR 70
V +K + + S++P A VWE+ A+ S + H A GIS+RFPR
Sbjct: 802 HVTEKPKPYYRYDSSVEPDHWFDAVQVWEVKCADLSISPTHVAAAGIVDPEKGISLRFPR 861
Query: 71 VTKIRDDKDWKTATNLPELKVLFK 94
+IRDDK + AT+ ++ L+K
Sbjct: 862 FLRIRDDKKAEDATSASQVAELYK 885
>gi|390604378|gb|EIN13769.1| DNA ligase I [Punctularia strigosozonata HHB-11173 SS5]
Length = 811
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 36/58 (62%), Gaps = 7/58 (12%)
Query: 45 VWEISGAEFSQAEIHTAD-------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKK 95
VWE+ A+ S + I+TA G+S+RFPR ++RDDKD + AT ++ ++++
Sbjct: 732 VWEVLAADLSLSPIYTAAQGLVEDRGVSLRFPRFIRVRDDKDAEDATAPEQIAEMYER 789
>gi|124512824|ref|XP_001349768.1| DNA ligase I [Plasmodium falciparum 3D7]
gi|23615185|emb|CAD52175.1| DNA ligase I [Plasmodium falciparum 3D7]
gi|23683342|gb|AAL59668.2| DNA ligase 1 [Plasmodium falciparum]
gi|24935322|gb|AAN64156.1| DNA ligase 1 precursor [Plasmodium falciparum]
Length = 912
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 31 SRSLKPVLEHKAQPVWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDWKT 82
S L P + A VWE+ A+ S + +HTA GI +RFPR ++R+DK+ +
Sbjct: 821 SDKLNPDVWFDAHYVWEVKAADLSLSPVHTAAIGIYADDKGIGLRFPRFLRLREDKNAEQ 880
Query: 83 AT 84
AT
Sbjct: 881 AT 882
>gi|325188612|emb|CCA23144.1| DNA ligase putative [Albugo laibachii Nc14]
Length = 882
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 8/70 (11%)
Query: 33 SLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTAT 84
++KP + + VWEI GA+ S + +TA GIS+RFPR +IRDDK AT
Sbjct: 793 NIKPDVWFEPSCVWEILGADLSISPKYTAAMGLIAREKGISLRFPRFIRIRDDKKPTEAT 852
Query: 85 NLPELKVLFK 94
++ L++
Sbjct: 853 TAAQIADLYR 862
>gi|449546932|gb|EMD37901.1| hypothetical protein CERSUDRAFT_65472 [Ceriporiopsis subvermispora
B]
Length = 841
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 9/64 (14%)
Query: 34 LKPVLEHKAQPVWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDWKTATN 85
LKP + K Q VWEI GA+ + + + A G+S+RFPR +IR+DK + A+
Sbjct: 727 LKPEVYFKPQEVWEIRGADVTISPVSVAALGLVSSTRGLSLRFPRFIRIREDKGLENAST 786
Query: 86 LPEL 89
PE
Sbjct: 787 -PEF 789
>gi|302697907|ref|XP_003038632.1| hypothetical protein SCHCODRAFT_46359 [Schizophyllum commune H4-8]
gi|300112329|gb|EFJ03730.1| hypothetical protein SCHCODRAFT_46359, partial [Schizophyllum
commune H4-8]
Length = 833
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 40/68 (58%), Gaps = 7/68 (10%)
Query: 35 KPVLEHKAQPVWEISGAEFSQAEIHTAD-------GISIRFPRVTKIRDDKDWKTATNLP 87
KP + + + VWE+ A+ S + ++TA GIS+RFPR +IRDDK+ AT
Sbjct: 748 KPDIWFEPKVVWEVLTADLSLSPVYTAAMGLVDERGISLRFPRFIRIRDDKNADNATGCE 807
Query: 88 ELKVLFKK 95
++ ++++
Sbjct: 808 QVAEMYER 815
>gi|255073103|ref|XP_002500226.1| predicted protein [Micromonas sp. RCC299]
gi|226515488|gb|ACO61484.1| predicted protein [Micromonas sp. RCC299]
Length = 676
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 8/85 (9%)
Query: 27 FKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDK 78
FKY + ++K + VWE+ A+ S + +H A GI++RFPR + RDDK
Sbjct: 586 FKYDANAMKCDVWFDPSQVWEVKAADLSISPVHQAGHGLVDPVKGIALRFPRFLRKRDDK 645
Query: 79 DWKTATNLPELKVLFKKSKETSDFT 103
+ + ATN ++ + +F
Sbjct: 646 NVEQATNSEQVADFYNAQATKQEFA 670
>gi|343427357|emb|CBQ70884.1| probable CDC9-DNA ligase I [Sporisorium reilianum SRZ2]
Length = 852
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 42/67 (62%), Gaps = 7/67 (10%)
Query: 35 KPVLEHKAQPVWEISGAEFSQAEIHTAD-------GISIRFPRVTKIRDDKDWKTATNLP 87
KP + +A+ VWE+ A+ S + ++TA G+S+RFPR ++RDDK + +T+
Sbjct: 764 KPDVYFEARVVWEVLTADLSLSPVYTAAKGLIEQRGVSLRFPRFIRVRDDKTAEESTSPE 823
Query: 88 ELKVLFK 94
+++ +++
Sbjct: 824 QIEAMYR 830
>gi|356542672|ref|XP_003539790.1| PREDICTED: DNA ligase 1-like [Glycine max]
Length = 776
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 47/89 (52%), Gaps = 8/89 (8%)
Query: 17 RVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRF 68
R +V K + F ++ P + +A VWE+ A+ + + +H A GIS+RF
Sbjct: 674 RSKVIPKPKAYYRFGETINPDVWFEASEVWEVKAADLTISPVHRAAVGIVDPNKGISLRF 733
Query: 69 PRVTKIRDDKDWKTATNLPELKVLFKKSK 97
PR+ ++R DK + A++ ++ ++K K
Sbjct: 734 PRLLRVRPDKAPEQASSSEQVAEMYKAQK 762
>gi|198427151|ref|XP_002124805.1| PREDICTED: similar to ligase I [Ciona intestinalis]
Length = 1060
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%), Gaps = 8/62 (12%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
VWE+ A+ S + ++ A GIS+RFPR +IRDDK + ATN ++ L+ K
Sbjct: 982 VWEVKAADLSVSPVYAAANGIIDPERGISLRFPRFIRIRDDKKPEEATNSQQVADLYHKQ 1041
Query: 97 KE 98
++
Sbjct: 1042 QQ 1043
>gi|15606583|ref|NP_213963.1| ATP-dependent DNA ligase [Aquifex aeolicus VF5]
gi|2983805|gb|AAC07362.1| DNA ligase (ATP dependent) [Aquifex aeolicus VF5]
Length = 585
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 25/32 (78%)
Query: 6 RCYSEIKYDGERVQVHKKGNEFKYFSRSLKPV 37
+C +E KYDGER+Q H+KG+EF FSR L+ +
Sbjct: 245 KCGAEYKYDGERIQAHRKGDEFYLFSRRLENI 276
>gi|14423667|sp|O67398.2|DNLI_AQUAE RecName: Full=Probable DNA ligase; AltName:
Full=Polydeoxyribonucleotide synthase [ATP]
Length = 584
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 25/32 (78%)
Query: 6 RCYSEIKYDGERVQVHKKGNEFKYFSRSLKPV 37
+C +E KYDGER+Q H+KG+EF FSR L+ +
Sbjct: 244 KCGAEYKYDGERIQAHRKGDEFYLFSRRLENI 275
>gi|156102559|ref|XP_001616972.1| DNA ligase 1 precursor [Plasmodium vivax Sal-1]
gi|148805846|gb|EDL47245.1| DNA ligase 1 precursor, putative [Plasmodium vivax]
Length = 933
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 31 SRSLKPVLEHKAQPVWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDWKT 82
S L P + A VWE+ A+ S + +HTA GI +RFPR ++R+DK+ +
Sbjct: 843 SDKLNPDVWFDAHYVWEVKAADLSLSPVHTAAIGVYSDDKGIGLRFPRFLRLREDKNAEQ 902
Query: 83 AT 84
AT
Sbjct: 903 AT 904
>gi|1359495|emb|CAA66599.1| DNA ligase [Arabidopsis thaliana]
Length = 790
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 17 RVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRF 68
R QV ++ SL P + + VWE+ A+ + + +H A GIS+RF
Sbjct: 689 RSQVIATPKQYYRVGDSLNPDVWFEPTEVWEVKAADLTISPVHRAATGIVDPDKGISLRF 748
Query: 69 PRVTKIRDDKDWKTATNLPELKVLFKKSK 97
PR+ ++R+DK + AT+ ++ L++ K
Sbjct: 749 PRLLRVREDKKPEEATSSEQIADLYQAQK 777
>gi|62321656|dbj|BAD95276.1| DNA ligase like protein [Arabidopsis thaliana]
Length = 336
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 17 RVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRF 68
R QV ++ SL P + + VWE+ A+ + + +H A GIS+RF
Sbjct: 235 RSQVIATPKQYYRVGDSLNPDVWFEPTEVWEVKAADLTISPVHRAATGIVDPDKGISLRF 294
Query: 69 PRVTKIRDDKDWKTATNLPELKVLFKKSK 97
PR+ ++R+DK + AT+ ++ L++ K
Sbjct: 295 PRLLRVREDKKPEEATSSEQIADLYQAQK 323
>gi|403171394|ref|XP_003330631.2| DNA ligase 1 [Puccinia graminis f. sp. tritici CRL 75-36-700-3]
gi|375169165|gb|EFP86212.2| DNA ligase 1 [Puccinia graminis f. sp. tritici CRL 75-36-700-3]
Length = 788
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 9/76 (11%)
Query: 35 KPVLEHKAQPVWEISGAEFSQAEIHTAD---------GISIRFPRVTKIRDDKDWKTATN 85
KP + + + VWE+ A+ S + +++A G+S+RFPR K RDDK+ + AT+
Sbjct: 690 KPDVWFEPKLVWEVLAADLSLSPVYSAAKGLCGDGTRGVSLRFPRYIKERDDKNGEDATS 749
Query: 86 LPELKVLFKKSKETSD 101
++ ++KK T D
Sbjct: 750 SEQVAEMYKKQASTVD 765
>gi|30680522|ref|NP_172293.2| DNA ligase 1 [Arabidopsis thaliana]
gi|27735188|sp|Q42572.2|DNLI1_ARATH RecName: Full=DNA ligase 1; Short=AtLIG1; AltName: Full=DNA ligase
I; AltName: Full=Polydeoxyribonucleotide synthase [ATP]
1; Flags: Precursor
gi|26449576|dbj|BAC41914.1| putative DNA ligase [Arabidopsis thaliana]
gi|29029040|gb|AAO64899.1| At1g08130 [Arabidopsis thaliana]
gi|332190130|gb|AEE28251.1| DNA ligase 1 [Arabidopsis thaliana]
Length = 790
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 17 RVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRF 68
R QV ++ SL P + + VWE+ A+ + + +H A GIS+RF
Sbjct: 689 RSQVIATPKQYYRVGDSLNPDVWFEPTEVWEVKAADLTISPVHRAATGIVDPDKGISLRF 748
Query: 69 PRVTKIRDDKDWKTATNLPELKVLFKKSK 97
PR+ ++R+DK + AT+ ++ L++ K
Sbjct: 749 PRLLRVREDKKPEEATSSEQIADLYQAQK 777
>gi|301625480|ref|XP_002941929.1| PREDICTED: DNA ligase 1 [Xenopus (Silurana) tropicalis]
Length = 1040
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 8/59 (13%)
Query: 45 VWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDWKTATNLPELKVLFKK 95
VWE+ A+ S + +H A GIS+RFPR +IRDDK + ATN ++ L++K
Sbjct: 964 VWEVKCADLSISPVHKAALGLVEDEKGISLRFPRFLRIRDDKKPEEATNSFQVADLYRK 1022
>gi|11068104|ref|NP_068320.1| PxORF101 peptide [Plutella xylostella granulovirus]
gi|11036896|gb|AAG27399.1|AF270937_101 PxORF101 peptide [Plutella xylostella granulovirus]
Length = 523
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
Query: 43 QPVWEISGAEFSQAEI------HTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
PVWEI G E ++ +SIR PR K+R DK++K AT L ELK+L +
Sbjct: 438 MPVWEIEGDFIRTVEQKWKCGHFISNYVSIRLPRYIKLRKDKNYKCATKLFELKLLCAIA 497
Query: 97 KE 98
K+
Sbjct: 498 KD 499
>gi|285002423|ref|YP_003422487.1| DNA ligase [Pseudaletia unipuncta granulovirus]
gi|197343683|gb|ACH69498.1| DNA ligase [Pseudaletia unipuncta granulovirus]
Length = 552
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 4/55 (7%)
Query: 38 LEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVL 92
L ++ PVWE+ G A + +SIR PR +IR+DK+++ AT + ELK+L
Sbjct: 472 LNPESMPVWELQGDFIRSA----TNKVSIRLPRFIRIRNDKNFQNATRMFELKIL 522
>gi|9635391|ref|NP_059289.1| ORF141 [Xestia c-nigrum granulovirus]
gi|6175785|gb|AAF05255.1|AF162221_141 ORF141 [Xestia c-nigrum granulovirus]
Length = 527
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 36/55 (65%), Gaps = 4/55 (7%)
Query: 38 LEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVL 92
++ A PVWE+ G +F ++ T + +SIR PR +IR DK++ AT + ELK+L
Sbjct: 448 IDPTAMPVWELQG-DFIRS---TTNKVSIRLPRFIRIRSDKNYLNATRMFELKIL 498
>gi|164519337|ref|YP_001649124.1| ligase [Helicoverpa armigera granulovirus]
gi|163869523|gb|ABY47833.1| ligase [Helicoverpa armigera granulovirus]
Length = 527
Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 34/51 (66%), Gaps = 4/51 (7%)
Query: 42 AQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVL 92
A PVWE+ G +F ++ T + +SIR PR +IR DK++ AT + ELK+L
Sbjct: 452 AMPVWELQG-DFIRS---TTNKVSIRLPRFIRIRSDKNYLNATRMFELKIL 498
>gi|427784439|gb|JAA57671.1| Putative dna ligase [Rhipicephalus pulchellus]
Length = 890
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 26/32 (81%)
Query: 1 MAKNERCYSEIKYDGERVQVHKKGNEFKYFSR 32
+ +E ++E K+DGER+QVHK G+EF+YF+R
Sbjct: 266 LLNHEPFFAETKFDGERLQVHKDGSEFRYFTR 297
Score = 35.0 bits (79), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 63 GISIRFPRVTKIRDDKDWKTATNLPEL 89
GI++RFPRV IR DK W+ + EL
Sbjct: 581 GITLRFPRVAAIRHDKPWQDVLSYSEL 607
>gi|326430673|gb|EGD76243.1| hypothetical protein PTSG_11661 [Salpingoeca sp. ATCC 50818]
Length = 1437
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 10/73 (13%)
Query: 31 SRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD----------GISIRFPRVTKIRDDKDW 80
S + P + + VWEI GA+F+ + HTA GIS+RFPR + R+DK
Sbjct: 1313 SAQMSPSVWFDSVEVWEIKGADFTASPAHTAARGAVADRPGAGISLRFPRFIRKREDKTP 1372
Query: 81 KTATNLPELKVLF 93
+ AT ++ L+
Sbjct: 1373 EEATTSTQISELY 1385
>gi|163782827|ref|ZP_02177823.1| DNA ligase [Hydrogenivirga sp. 128-5-R1-1]
gi|159881948|gb|EDP75456.1| DNA ligase [Hydrogenivirga sp. 128-5-R1-1]
Length = 583
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 25/32 (78%)
Query: 6 RCYSEIKYDGERVQVHKKGNEFKYFSRSLKPV 37
RC +E KYDGER+Q H+KG+EF +SR L+ +
Sbjct: 244 RCGAEYKYDGERIQAHRKGDEFWLYSRRLENI 275
>gi|357620386|gb|EHJ72598.1| hypothetical protein KGM_01327 [Danaus plexippus]
Length = 286
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 8/85 (9%)
Query: 27 FKYFSRSLKPVLEHKAQPVWEISGAEFSQAE--------IHTADGISIRFPRVTKIRDDK 78
+ F S P + VWE+ A+ S + +H + GIS+RFPR ++RDDK
Sbjct: 193 YYLFDSSHSPDVWFSPSCVWEVRCADLSLSPAHRAALGLVHDSKGISLRFPRFIRVRDDK 252
Query: 79 DWKTATNLPELKVLFKKSKETSDFT 103
+ AT+ ++ L+ + + + T
Sbjct: 253 SAELATSAEQIAELYLRQDQVKNTT 277
>gi|225436462|ref|XP_002272683.1| PREDICTED: DNA ligase 1 [Vitis vinifera]
gi|297734904|emb|CBI17138.3| unnamed protein product [Vitis vinifera]
Length = 723
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 8/77 (10%)
Query: 17 RVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRF 68
R +V + + ++ S+ P + + VWE+ A+ + + +H A GIS+RF
Sbjct: 622 RSKVISRPKPYYRYADSIDPDVWFEPTEVWEVKAADLTISPVHRAAVGIVDPNKGISLRF 681
Query: 69 PRVTKIRDDKDWKTATN 85
PR+ +IRDDK+ + A++
Sbjct: 682 PRLVRIRDDKNPEQASS 698
>gi|393247839|gb|EJD55346.1| ATP-dependent DNA ligase [Auricularia delicata TFB-10046 SS5]
Length = 605
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 40/68 (58%), Gaps = 7/68 (10%)
Query: 35 KPVLEHKAQPVWEISGAEFSQAEIHTAD-------GISIRFPRVTKIRDDKDWKTATNLP 87
KP + + + VWE+ A+ S + I+TA GIS+RFPR ++RDDK+ AT
Sbjct: 518 KPDVWLEPKVVWEVLAADLSLSPIYTAAQGKVDQRGISLRFPRFIRVRDDKNADDATGPD 577
Query: 88 ELKVLFKK 95
++ ++++
Sbjct: 578 QISEMYER 585
>gi|195028338|ref|XP_001987033.1| GH20192 [Drosophila grimshawi]
gi|193903033|gb|EDW01900.1| GH20192 [Drosophila grimshawi]
Length = 674
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 38/67 (56%), Gaps = 9/67 (13%)
Query: 27 FKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDK 78
F+Y S SL+P + VWE+ A+ S + IH A GIS+RFPR +IRDDK
Sbjct: 578 FRYDS-SLEPDDWFEPCQVWEVKCADLSLSPIHRAGIGIVDAERGISLRFPRFIRIRDDK 636
Query: 79 DWKTATN 85
+ AT+
Sbjct: 637 SPENATD 643
>gi|330923715|ref|XP_003300344.1| hypothetical protein PTT_11577 [Pyrenophora teres f. teres 0-1]
gi|311325552|gb|EFQ91558.1| hypothetical protein PTT_11577 [Pyrenophora teres f. teres 0-1]
Length = 873
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 12/104 (11%)
Query: 12 KYDGE----RVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD----- 62
KYD + V + +K + +Y + P + + VWE++ A+ + + +TA
Sbjct: 755 KYDPDDPECTVVLGQKPSFVRYNGGAGTPAVWFEPHEVWEVAFADLTLSPTYTAAIGLVS 814
Query: 63 ---GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKSKETSDFT 103
G+S RFPR ++R+DK AT EL L++K + + T
Sbjct: 815 EERGLSTRFPRFLRVREDKGVDEATEAGELAALYRKQEAKATLT 858
>gi|443721461|gb|ELU10753.1| hypothetical protein CAPTEDRAFT_17890 [Capitella teleta]
Length = 905
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 25/30 (83%)
Query: 4 NERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
N+ + E K+DGER+Q+HKKG+E+KYFSR
Sbjct: 259 NKSFFLETKFDGERMQLHKKGDEYKYFSRG 288
Score = 38.1 bits (87), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 45 VWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
+ +I AE + ++ G ++RFPRV KIR DK W + E+K L +KS
Sbjct: 552 ILQIKAAEITNSD-QFKSGCTLRFPRVEKIRMDKAWHECMSTKEMKDLRQKS 602
>gi|297847214|ref|XP_002891488.1| hypothetical protein ARALYDRAFT_337048 [Arabidopsis lyrata subsp.
lyrata]
gi|297337330|gb|EFH67747.1| hypothetical protein ARALYDRAFT_337048 [Arabidopsis lyrata subsp.
lyrata]
Length = 625
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 47/88 (53%), Gaps = 8/88 (9%)
Query: 33 SLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTAT 84
L P + + VWE+ A+ + + +H A GIS+RFPR+ ++R DK+ + AT
Sbjct: 537 GLNPDVWLEPTEVWEVKAADLTISPVHRAAIGIVDPDKGISLRFPRLVRVRKDKNPEEAT 596
Query: 85 NLPELKVLFKKSKETSDFTLKPKYDRIK 112
+ ++ +++ K T + +K K ++
Sbjct: 597 SSDQIAEMYQAQKNTINQAIKAKVTTVE 624
>gi|156549819|ref|XP_001606591.1| PREDICTED: DNA ligase 1-like [Nasonia vitripennis]
Length = 1128
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 12/71 (16%)
Query: 33 SLKPVLEHKAQP--VWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDWKT 82
SL+P +H +P VWE+ A+ S + +H A GIS+RFPR ++RDDK+ +
Sbjct: 1039 SLEP--DHWFEPKLVWEVKCADLSLSPVHGAAKGIVDPEKGISLRFPRFIRVRDDKNSED 1096
Query: 83 ATNLPELKVLF 93
AT+ ++ ++
Sbjct: 1097 ATSAQQIADMY 1107
>gi|387594385|gb|EIJ89409.1| DNA ligase [Nematocida parisii ERTm3]
Length = 541
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 10/73 (13%)
Query: 36 PVLEHKAQPVWEISGAEFSQAEIHTAD----------GISIRFPRVTKIRDDKDWKTATN 85
P + K VWE++ A FS + +TA GIS+RFPR + RDDK ++T+
Sbjct: 469 PDVWFKPVTVWEVAAAGFSVSSEYTAGMGAFDLPDGKGISLRFPRFIRQRDDKAADSSTS 528
Query: 86 LPELKVLFKKSKE 98
+L LF+ S++
Sbjct: 529 SEQLLHLFRASQQ 541
>gi|387596776|gb|EIJ94397.1| DNA ligase [Nematocida parisii ERTm1]
Length = 499
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 10/73 (13%)
Query: 36 PVLEHKAQPVWEISGAEFSQAEIHTAD----------GISIRFPRVTKIRDDKDWKTATN 85
P + K VWE++ A FS + +TA GIS+RFPR + RDDK ++T+
Sbjct: 427 PDVWFKPVTVWEVAAAGFSVSSEYTAGMGAFDLPDGKGISLRFPRFIRQRDDKAADSSTS 486
Query: 86 LPELKVLFKKSKE 98
+L LF+ S++
Sbjct: 487 SEQLLHLFRASQQ 499
>gi|147901564|ref|NP_001081653.1| DNA ligase 1 [Xenopus laevis]
gi|1706480|sp|P51892.1|DNLI1_XENLA RecName: Full=DNA ligase 1; AltName: Full=DNA ligase I; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 1
gi|1161304|gb|AAB37754.1| ligase I [Xenopus laevis]
Length = 1070
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 8/62 (12%)
Query: 45 VWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
VWE+ A+ S + +H A GIS+RFPR +IRDDK + +TN ++ L++K
Sbjct: 994 VWEVKCADLSISPVHKAALGLVEDQKGISLRFPRFLRIRDDKKPEESTNSFQVADLYRKQ 1053
Query: 97 KE 98
++
Sbjct: 1054 QQ 1055
>gi|388854717|emb|CCF51610.1| probable CDC9-DNA ligase I [Ustilago hordei]
Length = 858
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 42/67 (62%), Gaps = 7/67 (10%)
Query: 35 KPVLEHKAQPVWEISGAEFSQAEIHTAD-------GISIRFPRVTKIRDDKDWKTATNLP 87
KP + +A+ VWE+ A+ S + ++TA G+S+RFPR ++RDDK + +T+
Sbjct: 771 KPDVYFEAKVVWEVLTADLSLSPVYTAAKGLIEQRGVSLRFPRFIRVRDDKMVEESTSPE 830
Query: 88 ELKVLFK 94
+++ +++
Sbjct: 831 QIEAMYR 837
>gi|390361383|ref|XP_001180844.2| PREDICTED: DNA ligase 1-like [Strongylocentrotus purpuratus]
Length = 942
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 8/72 (11%)
Query: 30 FSRSLKPVLEHKAQPVWEISGAEFSQAEIH--------TADGISIRFPRVTKIRDDKDWK 81
+ S+ P A VWEI A+ S + +H A GIS+RFPR +IRDDK +
Sbjct: 849 YDSSVAPDHWFDAVQVWEIKAADLSVSPVHKAAIGIVDPAKGISLRFPRFIRIRDDKKPE 908
Query: 82 TATNLPELKVLF 93
AT ++ ++
Sbjct: 909 EATGSSQVASMY 920
>gi|297849114|ref|XP_002892438.1| ATLIG1 [Arabidopsis lyrata subsp. lyrata]
gi|297338280|gb|EFH68697.1| ATLIG1 [Arabidopsis lyrata subsp. lyrata]
Length = 793
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 17 RVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRF 68
R QV ++ SL P + + VWE+ A+ + + +H A GIS+RF
Sbjct: 692 RSQVIATPKQYYRVGDSLNPDVWFEPTEVWEVKAADLTISPVHRAATGIVDPDKGISLRF 751
Query: 69 PRVTKIRDDKDWKTATNLPELKVLFKKSK 97
PR+ ++R+DK + AT+ ++ +++ K
Sbjct: 752 PRLLRVREDKKPEDATSSEQIADMYQAQK 780
>gi|261329005|emb|CBH11983.1| DNA ligase I, putative [Trypanosoma brucei gambiense DAL972]
Length = 746
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 28 KYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKD 79
+Y+ KP + +A VWE+ A+ S + H A GI++RFPR ++R+DK
Sbjct: 659 RYYRTEDKPDVWFQASQVWEVKAADLSISPAHFAAYGLVDASKGIALRFPRFIRVREDKK 718
Query: 80 WKTATNLPELKVLF 93
AT+ ++ ++
Sbjct: 719 VHEATSAAQVAEMY 732
>gi|389644810|ref|XP_003720037.1| DNA ligase 1 [Magnaporthe oryzae 70-15]
gi|351639806|gb|EHA47670.1| DNA ligase 1 [Magnaporthe oryzae 70-15]
gi|440470604|gb|ELQ39666.1| DNA ligase 1 [Magnaporthe oryzae Y34]
gi|440479018|gb|ELQ59810.1| DNA ligase 1 [Magnaporthe oryzae P131]
Length = 859
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 9/101 (8%)
Query: 3 KNERCYSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD 62
+N Y++ + DGER + F +S +P + + Q VWE++ A+ + + +TA
Sbjct: 742 ENRAFYNDGEEDGERQNTRARRPAFVEYSGP-EPDVWFEPQEVWEMAFADITLSPTYTAA 800
Query: 63 --------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKK 95
G+S+RFPR K R+DK A++ L LF+K
Sbjct: 801 IGLISDERGLSLRFPRFLKKREDKSIDEASSGEFLATLFRK 841
>gi|389737970|gb|EIM79176.1| DNA ligase [Stereum hirsutum FP-91666 SS1]
Length = 822
Score = 44.3 bits (103), Expect = 0.009, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 7/70 (10%)
Query: 35 KPVLEHKAQPVWEISGAEFSQAEIHTA-------DGISIRFPRVTKIRDDKDWKTATNLP 87
+P + + VWE+ GA+ + + + A G+S+RFPR K+RDDK + A+
Sbjct: 725 RPAVYFRPHEVWEVRGADITLSPVSVAAKGMVSDRGLSLRFPRFMKVRDDKSIEQASTPT 784
Query: 88 ELKVLFKKSK 97
L +++K +
Sbjct: 785 FLASVYRKQQ 794
>gi|340508217|gb|EGR33971.1| hypothetical protein IMG5_028790 [Ichthyophthirius multifiliis]
Length = 709
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 8/81 (9%)
Query: 29 YFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDW 80
YF K + K VWE+ GA+ + ++T GI +RFPR+ ++R+DK+
Sbjct: 620 YFVGDFKADVWLKPCVVWEVKGADLQISPVYTCGVGDVSENKGIGLRFPRLARVRNDKNV 679
Query: 81 KTATNLPELKVLFKKSKETSD 101
+TN + L+K+ S+
Sbjct: 680 TDSTNPSFIVDLYKQQAVVSN 700
>gi|443700074|gb|ELT99220.1| hypothetical protein CAPTEDRAFT_157358 [Capitella teleta]
Length = 603
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 8/65 (12%)
Query: 42 AQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNLPELKVLF 93
A VWE+ A+ S + +H A GIS+RFPR +IRDDK + AT+ ++ ++
Sbjct: 520 AVQVWEVKAADLSVSPVHHAAAGLVDPEKGISLRFPRFLRIRDDKKSEEATSAAQVAEMY 579
Query: 94 KKSKE 98
+ ++
Sbjct: 580 RSQEQ 584
>gi|443894934|dbj|GAC72280.1| ATP-dependent DNA ligase I [Pseudozyma antarctica T-34]
Length = 828
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 41/67 (61%), Gaps = 7/67 (10%)
Query: 35 KPVLEHKAQPVWEISGAEFSQAEIHTAD-------GISIRFPRVTKIRDDKDWKTATNLP 87
KP + A+ VWE+ A+ S + ++TA GIS+RFPR +IRDDK + +T+
Sbjct: 742 KPDVYFDAKVVWEVLTADLSLSPVYTAAKGLVDQRGISLRFPRFIRIRDDKAPEDSTSPE 801
Query: 88 ELKVLFK 94
+++ +++
Sbjct: 802 QIESMYR 808
>gi|302781670|ref|XP_002972609.1| hypothetical protein SELMODRAFT_97261 [Selaginella moellendorffii]
gi|300160076|gb|EFJ26695.1| hypothetical protein SELMODRAFT_97261 [Selaginella moellendorffii]
Length = 620
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 8/82 (9%)
Query: 29 YFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDW 80
Y+ +P + A VWEI GA+++ + +H A GIS+RFPR R DK
Sbjct: 537 YYQTLERPDVWFAAAKVWEIRGADYTISPVHQAAAGLVHPDRGISLRFPRFVGERIDKSP 596
Query: 81 KTATNLPELKVLFKKSKETSDF 102
+ AT+ EL LF D
Sbjct: 597 EDATSPSELVQLFNAQTRKVDI 618
>gi|288804741|ref|YP_003429426.1| DNA ligase [Pieris rapae granulovirus]
gi|270161316|gb|ACZ63588.1| DNA ligase [Pieris rapae granulovirus]
Length = 568
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 14/82 (17%)
Query: 43 QPVWEISGAEFSQAEIH-----TADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKSK 97
PVWE+ G I T + +SIR PR ++RDDK +K A + +L++L +
Sbjct: 485 MPVWEMEGDFIRSENIWNWGNVTRNYVSIRLPRFIRVRDDKTYKQANTIFDLQLLSSITN 544
Query: 98 ET------SDFTLKPKYDRIKN 113
+T DF L YD IKN
Sbjct: 545 KTFQYPELYDFYL---YDNIKN 563
>gi|242008676|ref|XP_002425128.1| DNA ligase, putative [Pediculus humanus corporis]
gi|212508802|gb|EEB12390.1| DNA ligase, putative [Pediculus humanus corporis]
Length = 786
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 12/74 (16%)
Query: 30 FSRSLKPVLEHKAQP--VWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKD 79
+ S++P +H +P VWE A+FS + IH A GIS+RFPR +IRDDK
Sbjct: 695 YDTSMEP--DHWFEPIQVWETKCADFSLSPIHRAAVGVVDPVKGISLRFPRFLRIRDDKK 752
Query: 80 WKTATNLPELKVLF 93
+ AT ++ L+
Sbjct: 753 PEDATTAQQIIDLY 766
>gi|353240611|emb|CCA72472.1| probable CDC9-DNA ligase I [Piriformospora indica DSM 11827]
Length = 826
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 35 KPVLEHKAQPVWEISGAEFSQAEIHTAD-------GISIRFPRVTKIRDDKDWKTATNLP 87
KP + + + VWE+ A+ S + I+TA GIS+RFPR ++RDDK AT
Sbjct: 739 KPDVWFEPKVVWEVLAADLSLSPIYTAAQGLVEQRGISLRFPRFIRVRDDKSADDATGPE 798
Query: 88 ELKVLFKK 95
++ ++++
Sbjct: 799 QIAEMYQR 806
>gi|328772647|gb|EGF82685.1| hypothetical protein BATDEDRAFT_9401 [Batrachochytrium
dendrobatidis JAM81]
Length = 621
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 8/69 (11%)
Query: 33 SLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTAT 84
+++P + + VWEI A+ S + +H A GIS+RFPR ++RDDK + AT
Sbjct: 531 NVRPDVWFEPTQVWEIKAADLSISPVHQAAVGLVDPQKGISLRFPRFIRVRDDKSPEQAT 590
Query: 85 NLPELKVLF 93
+ ++ ++
Sbjct: 591 SASQIAEMY 599
>gi|115439237|ref|NP_001043898.1| Os01g0685500 [Oryza sativa Japonica Group]
gi|113533429|dbj|BAF05812.1| Os01g0685500, partial [Oryza sativa Japonica Group]
Length = 318
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 53/108 (49%), Gaps = 18/108 (16%)
Query: 8 YSEIK--YDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--- 62
Y E+K Y G+R+ K Y+ P L A+ VWEI GA+ + + +H A
Sbjct: 209 YKEMKEFYSGDRILPKKP----VYYKTDELPELWFSAEQVWEIRGADLTLSPVHHAAIGL 264
Query: 63 -----GISIRFPRVTKIRDDK---DWKTATNLPEL-KVLFKKSKETSD 101
GIS+R PR + R D+ D TAT++ L K +K + +SD
Sbjct: 265 VHPSRGISVRMPRYIRSRPDRSPEDCSTATDVASLFKAQTRKMEVSSD 312
>gi|72390601|ref|XP_845595.1| DNA ligase I [Trypanosoma brucei brucei strain 927/4 GUTat10.1]
gi|62358780|gb|AAX79233.1| DNA ligase I, putative [Trypanosoma brucei]
gi|70802130|gb|AAZ12036.1| DNA ligase I, putative [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
Length = 699
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 28 KYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKD 79
+Y+ KP + +A VWE+ A+ S + H A GI++RFPR ++R+DK
Sbjct: 612 RYYRTEDKPDVWFQASQVWEVKAADLSISPAHFAAYGLVDASKGIALRFPRFIRVREDKK 671
Query: 80 WKTATNLPELKVLF 93
AT+ ++ ++
Sbjct: 672 VHEATSAAQVAEMY 685
>gi|429962074|gb|ELA41618.1| DNA ligase I, ATP-dependent (dnl1) [Vittaforma corneae ATCC 50505]
Length = 588
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Query: 29 YFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD----GISIRFPRVTKIRDDKDWKTAT 84
Y RS+KP + + + VWE+ A S + I++A GIS+RFPR K R DK + AT
Sbjct: 506 YNERSVKPDVWIEPKYVWEVKAASLSHSPIYSAGSSEKGISLRFPRFIKERPDKKPEDAT 565
Query: 85 NLPELKVLFKKSK 97
++ ++ ++K
Sbjct: 566 TSNQIVRMYNENK 578
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 24/38 (63%)
Query: 2 AKNERCYSEIKYDGERVQVHKKGNEFKYFSRSLKPVLE 39
+NE SE KYDGERVQ+H + K FSR+ + + E
Sbjct: 251 VENEEFLSEFKYDGERVQIHHFDGKTKVFSRNSEDLTE 288
>gi|340368751|ref|XP_003382914.1| PREDICTED: DNA ligase 1-like [Amphimedon queenslandica]
Length = 780
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 10/79 (12%)
Query: 29 YFSRSLKPVLEHKAQPV--WEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDK 78
Y+S S +H +PV WE+ A+ S + ++ A GIS+RFPR +IR+DK
Sbjct: 686 YYSTSDSITPDHWFEPVQVWEVKAADLSVSPVYPAAAGIIDPEKGISLRFPRFLRIREDK 745
Query: 79 DWKTATNLPELKVLFKKSK 97
+ AT ++ +L+++ +
Sbjct: 746 KPEQATTNQQVAILYRQQQ 764
>gi|166157050|emb|CAO79507.1| putative DNA ligase [uncultured candidate division WWE3 bacterium
EJ0ADIGA11YD11]
Length = 600
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 30 FSRSLKPVLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPEL 89
++ KP + + + V EI E + + HTA G ++RFPR+ K R DK+ + AT++ E+
Sbjct: 531 MNKIFKPDVFVEPKIVVEIGADEITISPTHTA-GFALRFPRLIKFRTDKNPEDATSVTEI 589
Query: 90 KVLFKK 95
K ++KK
Sbjct: 590 KDMYKK 595
>gi|348520056|ref|XP_003447545.1| PREDICTED: DNA ligase 1-like [Oreochromis niloticus]
Length = 1044
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 8/75 (10%)
Query: 32 RSLKPVLEHKAQPVWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDWKTA 83
+S +P + A VWE+ A+ S + ++ A GIS+RFPR +IRDDK + A
Sbjct: 956 QSAEPDVWLDAVQVWEVKCADLSLSPVYKAAMGMVDPEKGISLRFPRFLRIRDDKKPEDA 1015
Query: 84 TNLPELKVLFKKSKE 98
T ++ L+KK ++
Sbjct: 1016 TAAAQIAELYKKQQQ 1030
>gi|303276855|ref|XP_003057721.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460378|gb|EEH57672.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 682
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 8/81 (9%)
Query: 30 FSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWK 81
+ S+ P + A VWE+ A+ S + H A GI++RFPR ++R+DK +
Sbjct: 593 YGESVAPDVWFAASQVWEVKAADLSISPTHMAAHGLVDSTKGIALRFPRFLRVREDKTPE 652
Query: 82 TATNLPELKVLFKKSKETSDF 102
TAT+ ++ + +F
Sbjct: 653 TATSAEQVADFYNAQATKQEF 673
>gi|119719660|ref|YP_920155.1| ATP-dependent DNA ligase [Thermofilum pendens Hrk 5]
gi|224487899|sp|A1RY72.1|DNLI2_THEPD RecName: Full=DNA ligase 2; AltName: Full=Polydeoxyribonucleotide
synthase [ATP] 2
gi|119524780|gb|ABL78152.1| DNA ligase I, ATP-dependent Dnl1 [Thermofilum pendens Hrk 5]
Length = 601
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 24/35 (68%)
Query: 6 RCYSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEH 40
+C +E KYDGERVQ HK G++ FSR L+ + H
Sbjct: 259 KCLAEYKYDGERVQAHKSGDKVLLFSRRLENITHH 293
>gi|406696184|gb|EKC99479.1| DNA ligase [Trichosporon asahii var. asahii CBS 8904]
Length = 727
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 34/55 (61%), Gaps = 4/55 (7%)
Query: 35 KPVLEHKAQPVWEISGAEFSQAEIHTAD----GISIRFPRVTKIRDDKDWKTATN 85
KP + + + VWE+ A+ S + ++TA GIS+RFPR K+RDDK + AT
Sbjct: 646 KPDVWFEPKVVWEVLTADLSLSPVYTAAHGLRGISLRFPRFIKVRDDKGPEEATT 700
>gi|378726686|gb|EHY53145.1| DNA ligase 4 [Exophiala dermatitidis NIH/UT8656]
Length = 1044
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Query: 45 VWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVL 92
V E+ A+ + +E + A G+++RFPR K+R DKDW+TA +L E K L
Sbjct: 650 VIEVKAAQVTASEDY-ACGMTLRFPRFKKLRRDKDWRTALSLEEFKDL 696
>gi|401883830|gb|EJT48014.1| DNA ligase [Trichosporon asahii var. asahii CBS 2479]
Length = 358
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Query: 35 KPVLEHKAQPVWEISGAEFSQAEIHTAD----GISIRFPRVTKIRDDKDWKTATNLPELK 90
KP + + + VWE+ A+ S + ++TA GIS+RFPR K+RDDK + AT ++
Sbjct: 277 KPDVWFEPKVVWEVLTADLSLSPVYTAAHGLRGISLRFPRFIKVRDDKGPEEATTAEQVA 336
Query: 91 VLFK 94
++
Sbjct: 337 DFYQ 340
>gi|255565451|ref|XP_002523716.1| DNA ligase I, putative [Ricinus communis]
gi|223537020|gb|EEF38656.1| DNA ligase I, putative [Ricinus communis]
Length = 737
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 47/90 (52%), Gaps = 8/90 (8%)
Query: 17 RVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRF 68
R +V + + + +KP + + VWE+ A+ + + +H A GIS+RF
Sbjct: 634 RAKVVPQPKSYYRYEEKIKPDVWFEPTEVWEVKAADLTISPVHRAAVGIVNSDKGISLRF 693
Query: 69 PRVTKIRDDKDWKTATNLPELKVLFKKSKE 98
PR+ ++R+DK + AT+ ++ ++ K+
Sbjct: 694 PRLMRVREDKSPEEATSSDQVADMYNAQKQ 723
>gi|403412845|emb|CCL99545.1| predicted protein [Fibroporia radiculosa]
Length = 826
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 7/58 (12%)
Query: 45 VWEISGAEFSQAEIHTAD-------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKK 95
VWE+ A+ S + I+TA GIS+RFPR +IRDDK AT ++ ++++
Sbjct: 747 VWEVLTADLSLSPIYTAAQGLVEERGISLRFPRFIRIRDDKSADDATGPEQIAEMYER 804
>gi|347482118|gb|AEO98059.1| DNA ligase [Emiliania huxleyi virus 203]
gi|347601305|gb|AEP15791.1| DNA ligase [Emiliania huxleyi virus 207]
gi|347601721|gb|AEP16206.1| DNA ligase I [Emiliania huxleyi virus 208]
Length = 622
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 8/61 (13%)
Query: 33 SLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTAT 84
SLKP + VWE+ A+ S + +H A GI++RFPR K+R DK+ AT
Sbjct: 547 SLKPDVWFSPTQVWEVLSADLSISPVHMAGHGIVDPNKGIALRFPRFIKVRTDKNITDAT 606
Query: 85 N 85
Sbjct: 607 T 607
>gi|73852627|ref|YP_293911.1| putative DNA ligase [Emiliania huxleyi virus 86]
gi|72415343|emb|CAI65580.1| putative DNA ligase [Emiliania huxleyi virus 86]
Length = 622
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 8/61 (13%)
Query: 33 SLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTAT 84
SLKP + VWE+ A+ S + +H A GI++RFPR K+R DK+ AT
Sbjct: 547 SLKPDVWFSPTQVWEVLSADLSISPVHMAGHGIVDPNKGIALRFPRFIKVRTDKNITDAT 606
Query: 85 N 85
Sbjct: 607 T 607
>gi|412992688|emb|CCO18668.1| predicted protein [Bathycoccus prasinos]
Length = 850
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 8/64 (12%)
Query: 30 FSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWK 81
+ ++P L A+ VWE+ A+ S + H A GI++RFPR + RDDK+ +
Sbjct: 767 YPEGMEPDLWFDAKLVWEVKAADLSISPTHKAAMGLVDPNKGIALRFPRFLRSRDDKEPE 826
Query: 82 TATN 85
ATN
Sbjct: 827 MATN 830
>gi|347600922|gb|AEP15409.1| DNA ligase 1 [Emiliania huxleyi virus 88]
Length = 622
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 8/61 (13%)
Query: 33 SLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTAT 84
SLKP + VWE+ A+ S + +H A GI++RFPR K+R DK+ AT
Sbjct: 547 SLKPDVWFSPTQVWEVLSADLSISPVHMAGHGIVDPDKGIALRFPRFIKVRTDKNITDAT 606
Query: 85 N 85
Sbjct: 607 T 607
>gi|449551128|gb|EMD42092.1| hypothetical protein CERSUDRAFT_110637 [Ceriporiopsis subvermispora
B]
Length = 841
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 7/58 (12%)
Query: 45 VWEISGAEFSQAEIHTAD-------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKK 95
VWE+ A+ S + I+TA GIS+RFPR +IRDDK + T ++ +++K
Sbjct: 762 VWEVLTADLSLSPIYTAAQGLVDERGISLRFPRFIRIRDDKSAEDGTGPEQIAEMYEK 819
>gi|393218639|gb|EJD04127.1| DNA ligase I [Fomitiporia mediterranea MF3/22]
Length = 849
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 7/58 (12%)
Query: 45 VWEISGAEFSQAEIHTAD-------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKK 95
VWE+ A+ S + I+TA GIS+RFPR +IRDDK AT ++ ++++
Sbjct: 769 VWEVLTADLSLSPIYTAAQGLVEERGISLRFPRFIRIRDDKSADDATGPEQIAEMYER 826
>gi|392570124|gb|EIW63297.1| ATP-dependent DNA ligase [Trametes versicolor FP-101664 SS1]
Length = 1014
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 9/75 (12%)
Query: 34 LKPVLEHKAQPVWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDWKTATN 85
L+P + K Q VWEI GA+ + + + A G+S+RFPR IR+DK + A++
Sbjct: 911 LRPEVYFKPQEVWEIRGADITISPVSVAALGLVSQTRGLSLRFPRFISIREDKGIENASD 970
Query: 86 LPELKVLFKKSKETS 100
PE + ++++
Sbjct: 971 -PEFLAKMYRDQQSA 984
>gi|121705708|ref|XP_001271117.1| DNA ligase I, putative [Aspergillus clavatus NRRL 1]
gi|119399263|gb|EAW09691.1| DNA ligase I, putative [Aspergillus clavatus NRRL 1]
Length = 834
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 8/72 (11%)
Query: 35 KPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNL 86
+P + + Q VWE++ A+ + + +TA G+S+RFPR K+RDDK AT
Sbjct: 742 EPDVWFEPQEVWEMAFADITLSPTYTAALGLVSDERGLSLRFPRFLKVRDDKSIDEATTS 801
Query: 87 PELKVLFKKSKE 98
L +L++K E
Sbjct: 802 DYLALLWRKQAE 813
>gi|334265783|ref|YP_004376312.1| DNA ligase [Clostera anachoreta granulovirus]
gi|327553798|gb|AEB00392.1| DNA ligase [Clostera anachoreta granulovirus]
Length = 552
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 7/73 (9%)
Query: 42 AQPVWEISGAEFSQAEI-----HTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
+ PVWE+ G E T + +SIR PR ++RDDKD++ A + +L +L S
Sbjct: 468 SMPVWEMEGDFIRSDEAWVFGDVTHNYVSIRLPRFVRVRDDKDYRQANTIFDLALLSTIS 527
Query: 97 KETSDFTLKPKYD 109
+T FT Y+
Sbjct: 528 NKT--FTYDALYE 538
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Query: 5 ERCYSEIKYDGERVQVHKKGNEFKYFSRSLKPVL 38
E C E+KYDGERVQ+HK Y+ R+L P L
Sbjct: 220 ETCL-EVKYDGERVQLHKCNGVVTYYKRNLNPSL 252
>gi|403414778|emb|CCM01478.1| predicted protein [Fibroporia radiculosa]
Length = 913
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 8/59 (13%)
Query: 34 LKPVLEHKAQPVWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDWKTAT 84
LKP + K Q VWEI GA+ + + + A G+S+RFPR K+R+DK A+
Sbjct: 811 LKPEVYFKPQEVWEIRGADVTVSPVSIAALGLVSQTRGLSLRFPRFMKVREDKKIDDAS 869
>gi|407416584|gb|EKF37703.1| DNA ligase I, putative [Trypanosoma cruzi marinkellei]
Length = 712
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 28 KYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKD 79
+Y+ KP + +A VWE+ A+ S + +H A GI++RFPR ++R+DK
Sbjct: 611 RYYRAEEKPDVWLEASNVWEVKAADLSISPVHFAAYGLVDPSKGIALRFPRFVRVREDKK 670
Query: 80 WKTATNLPELKVLF 93
AT ++ ++
Sbjct: 671 ANEATFASQIAAMY 684
>gi|311257832|ref|XP_003127315.1| PREDICTED: DNA ligase 1 [Sus scrofa]
Length = 921
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 8/65 (12%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
VWE+ A+ S + I+ A GIS+RFPR ++RDDK + AT ++ L++K
Sbjct: 843 VWEVKCADLSLSPIYPAARGLVDSEKGISLRFPRFIRVRDDKKPEEATTSAQVACLYRKQ 902
Query: 97 KETSD 101
+ +
Sbjct: 903 SQIQN 907
>gi|260801006|ref|XP_002595387.1| hypothetical protein BRAFLDRAFT_69217 [Branchiostoma floridae]
gi|229280633|gb|EEN51399.1| hypothetical protein BRAFLDRAFT_69217 [Branchiostoma floridae]
Length = 952
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 9/83 (10%)
Query: 20 VHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTA--------DGISIRFPRV 71
V K + ++Y S S++P A VWEI A+ S + +H A GIS+RFPR
Sbjct: 849 VDKPKSYYRYDS-SVEPDHWFDAVQVWEIKCADLSISPVHKAAEGIVDPEKGISLRFPRF 907
Query: 72 TKIRDDKDWKTATNLPELKVLFK 94
+IRDDK + AT+ ++ +++
Sbjct: 908 LRIRDDKKPEEATSAQQVAEMYR 930
>gi|118431328|ref|NP_147713.2| ATP-dependent DNA ligase [Aeropyrum pernix K1]
gi|14423680|sp|Q9YD18.2|DNLI_AERPE RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|116062651|dbj|BAA80079.2| ADP-dependent DNA ligase [Aeropyrum pernix K1]
Length = 602
Score = 43.1 bits (100), Expect = 0.019, Method: Composition-based stats.
Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 16/76 (21%)
Query: 36 PVLEHKAQP-VW-------EISGAEFSQAEIHT--------ADGISIRFPRVTKIRDDKD 79
P +E + +P VW EI GAE + + +HT GISIRFPR + RDDK
Sbjct: 515 PRVESRIEPDVWVEPALVAEILGAELTLSPMHTCCLNTVRPGVGISIRFPRFIRWRDDKS 574
Query: 80 WKTATNLPELKVLFKK 95
+ AT EL ++K+
Sbjct: 575 PEDATTTHELLEMYKR 590
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 20/32 (62%)
Query: 6 RCYSEIKYDGERVQVHKKGNEFKYFSRSLKPV 37
R E KYDGER Q+HKK E +SR L+ +
Sbjct: 258 RAVVEYKYDGERAQIHKKDGEVYIYSRRLENI 289
>gi|342318887|gb|EGU10843.1| DNA ligase [Rhodotorula glutinis ATCC 204091]
Length = 872
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 33/51 (64%), Gaps = 8/51 (15%)
Query: 45 VWEISGAEFSQAEIHTAD-------GISIRFPRVTKIRDDKDWKTATNLPE 88
VWE+ A+ S + I++A GIS+RFPR ++RDDKD +++T PE
Sbjct: 793 VWEVLAADLSLSPIYSAAKGLCGDRGISLRFPRFIRVRDDKDPESSTE-PE 842
>gi|407851837|gb|EKG05546.1| DNA ligase I, putative [Trypanosoma cruzi]
Length = 701
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 28 KYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKD 79
+Y+ KP + +A VWE+ A+ S + +H A GI++RFPR ++R+DK
Sbjct: 611 RYYRAEEKPDVWLEASNVWEVKAADLSISPVHFAAYGLVDPSKGIALRFPRFVRVREDKK 670
Query: 80 WKTATNLPELKVLF 93
AT ++ ++
Sbjct: 671 ANEATFATQIAAMY 684
>gi|432092332|gb|ELK24952.1| DNA ligase 4 [Myotis davidii]
Length = 1021
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 24/31 (77%)
Query: 3 KNERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
KN+ Y E K DGER+Q+HK GN ++YFSR+
Sbjct: 374 KNQSFYIETKLDGERMQMHKDGNVYEYFSRN 404
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 45 VWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
+ +I +E ++++ G ++RFPR+ KIR+DK+W L +L+ L K+
Sbjct: 666 IVQIKASEIVPSDMYKT-GCTLRFPRIEKIREDKEWHECMTLDDLEQLRGKA 716
>gi|395528668|ref|XP_003766449.1| PREDICTED: DNA ligase 1, partial [Sarcophilus harrisii]
Length = 709
Score = 43.1 bits (100), Expect = 0.020, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 18/82 (21%)
Query: 39 EHKAQP--VWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDWKTATNLPE 88
+H +P VWE+ A+ S + I++A GIS+RFPR ++R DK + AT+ +
Sbjct: 622 DHWLEPTTVWEVKCADLSVSPIYSAARGLVESDKGISLRFPRFVQVRKDKKPEEATSSAQ 681
Query: 89 LKVLFKKSK--------ETSDF 102
+ L+ K + ETSDF
Sbjct: 682 VACLYMKQQQIQNQQDLETSDF 703
>gi|242221818|ref|XP_002476649.1| predicted protein [Postia placenta Mad-698-R]
gi|220724080|gb|EED78152.1| predicted protein [Postia placenta Mad-698-R]
Length = 372
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 9/107 (8%)
Query: 2 AKNERCYSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTA 61
K E + ER +H+ + L+P + K Q VWEI GA+ + + + A
Sbjct: 256 GKRSHLLMEYQMSNERT-IHRVLRCLLQGTLGLRPEVFFKPQEVWEIRGADITISPVSVA 314
Query: 62 D--------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKSKETS 100
G+S+RFPR K+R+DK + A+ L +++ + T
Sbjct: 315 AIGLVNQNRGLSLRFPRFMKVREDKHIEDASTPEFLANMWRTQQATG 361
>gi|71649673|ref|XP_813552.1| DNA ligase I [Trypanosoma cruzi strain CL Brener]
gi|70878445|gb|EAN91701.1| DNA ligase I, putative [Trypanosoma cruzi]
Length = 701
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 28 KYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKD 79
+Y+ KP + +A VWE+ A+ S + +H A GI++RFPR ++R+DK
Sbjct: 611 RYYRAEEKPDVWLEASNVWEVKAADLSISPVHFAAYGIVDPSKGIALRFPRFVRVREDKK 670
Query: 80 WKTATNLPELKVLF 93
AT ++ ++
Sbjct: 671 ANEATFATQIAAMY 684
>gi|71663975|ref|XP_818973.1| DNA ligase I [Trypanosoma cruzi strain CL Brener]
gi|70884254|gb|EAN97122.1| DNA ligase I, putative [Trypanosoma cruzi]
Length = 699
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 28 KYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKD 79
+Y+ KP + +A VWE+ A+ S + +H A GI++RFPR ++R+DK
Sbjct: 611 RYYRAEEKPDVWLEASNVWEVKAADLSISPVHFAAYGLVDPSKGIALRFPRFVRVREDKK 670
Query: 80 WKTATNLPELKVLF 93
AT ++ ++
Sbjct: 671 ANEATFATQIAAMY 684
>gi|307187908|gb|EFN72821.1| DNA ligase 1 [Camponotus floridanus]
Length = 870
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 12/84 (14%)
Query: 30 FSRSLKPVLEHKAQPV--WEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKD 79
F S +P +H +PV WEI A+ S + +H A GIS+RFPR +IR+DK+
Sbjct: 778 FDSSHEP--DHWFEPVQVWEIKCADLSLSPVHRAAIGIVDPEKGISLRFPRFIRIREDKN 835
Query: 80 WKTATNLPELKVLFKKSKETSDFT 103
+ AT+ ++ ++ ++ + T
Sbjct: 836 CEEATSAQQVADMYNNQEQIKNKT 859
>gi|290990672|ref|XP_002677960.1| ATP-dependent DNA ligase IV [Naegleria gruberi]
gi|284091570|gb|EFC45216.1| ATP-dependent DNA ligase IV [Naegleria gruberi]
Length = 1059
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 38 LEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKSK 97
+E K + EI G F Q G+++RFPRV IR+DKDW +L L+ + + S+
Sbjct: 675 IEPKHSKILEIKGYSF-QESTKFKTGVTLRFPRVVSIRNDKDWNECLDLQGLEEMIEISR 733
>gi|342181689|emb|CCC91169.1| putative DNA ligase I, partial [Trypanosoma congolense IL3000]
Length = 710
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 28 KYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKD 79
+Y+ KP + +A VWE+ A+ S + H A GI++RFPR ++R+DK
Sbjct: 620 RYYRTDDKPDVWLQASQVWEVKAADLSISPAHFAAYGLVDASKGIALRFPRFVRVREDKK 679
Query: 80 WKTATNLPELKVLF 93
AT+ ++ ++
Sbjct: 680 AHEATSAMQVAEMY 693
>gi|403183158|gb|EJY57894.1| AAEL017566-PA [Aedes aegypti]
Length = 905
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 8/57 (14%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNLPELKVLF 93
VWE+ A+ S + +H A GIS+RFPR KIRDDK AT+ ++ ++
Sbjct: 827 VWEVLCADLSLSPVHRAGQGIIDPEKGISLRFPRFIKIRDDKGTTDATSAKQVADMY 883
>gi|159479866|ref|XP_001698007.1| hypothetical protein CHLREDRAFT_176829 [Chlamydomonas reinhardtii]
gi|158273806|gb|EDO99592.1| predicted protein [Chlamydomonas reinhardtii]
Length = 1384
Score = 43.1 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 8/59 (13%)
Query: 45 VWEISGAEFS--------QAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKK 95
VWE+ GA+ + +HT G+ +RFPR ++RDDK + AT ++ L+ K
Sbjct: 1224 VWELRGADLTLSPVHRAASGRLHTERGVGMRFPRFIRVRDDKRPEDATTPDDIVHLYNK 1282
>gi|312375309|gb|EFR22707.1| hypothetical protein AND_14322 [Anopheles darlingi]
Length = 738
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 8/72 (11%)
Query: 30 FSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWK 81
+ +L+P +A VWE+ A+ S + IH A GIS+RFPR ++RDDK
Sbjct: 644 YEANLEPDDWFEAVQVWEVLCADLSLSPIHQAAVGIVDPEKGISLRFPRFIRVRDDKGAT 703
Query: 82 TATNLPELKVLF 93
AT ++ ++
Sbjct: 704 DATTAQQVSEMY 715
>gi|358058970|dbj|GAA95368.1| hypothetical protein E5Q_02023.3 [Mixia osmundae IAM 14324]
Length = 1044
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 9/77 (11%)
Query: 21 HKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVT 72
H+ G Y + P + + + VWE+ A+ S + ++TA G+S+RFPR
Sbjct: 945 HECGKRGYYEVGTATPDVYFEPRVVWEVLAADLSLSPVYTAAREQLGGERGVSLRFPRFI 1004
Query: 73 KIRDDKDWKTATNLPEL 89
+IRDDK + +T PE
Sbjct: 1005 RIRDDKGVEDSTT-PEF 1020
>gi|283481371|emb|CAZ69487.1| putative DNA ligase [Emiliania huxleyi virus 99B1]
Length = 622
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 8/61 (13%)
Query: 33 SLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTAT 84
SLKP + +WE+ A+ S + +H A GI++RFPR K+R DK+ AT
Sbjct: 547 SLKPDVWFSPTQIWEVLSADLSISPVHMAGHGIVDPDKGIALRFPRFIKVRTDKNITDAT 606
Query: 85 N 85
Sbjct: 607 T 607
>gi|428177538|gb|EKX46417.1| hypothetical protein GUITHDRAFT_157730 [Guillardia theta CCMP2712]
Length = 637
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 8/72 (11%)
Query: 31 SRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKT 82
S L P + + + VWE++ A+ S + H A GI++RFPR+ ++RDDK +
Sbjct: 559 SPGLLPNVWFEPKIVWEVAAADLSISPKHKAAIGLVDESRGIALRFPRLVRVRDDKGPEQ 618
Query: 83 ATNLPELKVLFK 94
AT+ ++ +++
Sbjct: 619 ATSSTQVAAMYR 630
>gi|358058971|dbj|GAA95369.1| hypothetical protein E5Q_02023.4 [Mixia osmundae IAM 14324]
Length = 871
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 9/77 (11%)
Query: 21 HKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVT 72
H+ G Y + P + + + VWE+ A+ S + ++TA G+S+RFPR
Sbjct: 772 HECGKRGYYEVGTATPDVYFEPRVVWEVLAADLSLSPVYTAAREQLGGERGVSLRFPRFI 831
Query: 73 KIRDDKDWKTATNLPEL 89
+IRDDK + +T PE
Sbjct: 832 RIRDDKGVEDSTT-PEF 847
>gi|327279789|ref|XP_003224638.1| PREDICTED: DNA ligase 1-like [Anolis carolinensis]
Length = 913
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 8/59 (13%)
Query: 45 VWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDWKTATNLPELKVLFKK 95
VWE+ A+ S + +H A GIS+RFPR ++RDDK + AT ++ L++K
Sbjct: 837 VWEVKCADLSISPVHRAAAGLVDEEKGISLRFPRFLRLRDDKKPEEATTSAQVAELYRK 895
>gi|156376850|ref|XP_001630571.1| predicted protein [Nematostella vectensis]
gi|156217595|gb|EDO38508.1| predicted protein [Nematostella vectensis]
Length = 609
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 8/73 (10%)
Query: 30 FSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWK 81
+ L+P A VWE+ A+ S + +H A GIS+RFPR ++RDDK +
Sbjct: 518 YDDGLEPDHWFDAVQVWEVRAADLSVSPVHKAAVGQVDPVKGISLRFPRFLRVRDDKKPE 577
Query: 82 TATNLPELKVLFK 94
AT+ ++ +++
Sbjct: 578 EATDSTQVAEMYR 590
>gi|406984840|gb|EKE05753.1| hypothetical protein ACD_19C00182G0081 [uncultured bacterium]
Length = 552
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 45 VWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELK 90
V E++G S++ H+ G+S+RFPR KIR+DK AT L ELK
Sbjct: 504 VVEVTGDSISKSTKHSL-GLSLRFPRFLKIREDKGSNEATTLKELK 548
>gi|218188863|gb|EEC71290.1| hypothetical protein OsI_03304 [Oryza sativa Indica Group]
Length = 1226
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 16/101 (15%)
Query: 13 YDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GI 64
Y G+R+ K Y+ P L A+ VWEI GA+ + + +H A GI
Sbjct: 1124 YSGDRILPKKP----VYYKTDELPELWFSAEQVWEIRGADLTLSPVHHAAIGLVHPSRGI 1179
Query: 65 SIRFPRVTKIRDDK---DWKTATNLPEL-KVLFKKSKETSD 101
S+R PR + R D+ D TAT++ L K +K + +SD
Sbjct: 1180 SVRMPRYIRSRPDRSPEDCSTATDVASLFKAQTRKMEVSSD 1220
>gi|14602357|ref|NP_148904.1| ORF120 DNALIGASE [Cydia pomonella granulovirus]
gi|14591875|gb|AAK70780.1|U53466_120 ORF120 DNALIGASE [Cydia pomonella granulovirus]
Length = 570
Score = 43.1 bits (100), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 10/85 (11%)
Query: 42 AQPVWEISG------AEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKK 95
+ PVWE+ G ++ E+ + + +SIR PR K+RDDK ++ AT + +L++L
Sbjct: 487 SMPVWEMEGDFIHSDNAWTWNEV-SHNYVSIRLPRFIKVRDDKTYRQATTIFDLQLLSTI 545
Query: 96 SKETSDFTLKPKY---DRIKNLKLQ 117
+ + + ++ D IKN LQ
Sbjct: 546 TNNSFSYPYLYEFFVMDNIKNYSLQ 570
>gi|358058969|dbj|GAA95367.1| hypothetical protein E5Q_02023.2 [Mixia osmundae IAM 14324]
Length = 1165
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 9/77 (11%)
Query: 21 HKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVT 72
H+ G Y + P + + + VWE+ A+ S + ++TA G+S+RFPR
Sbjct: 1066 HECGKRGYYEVGTATPDVYFEPRVVWEVLAADLSLSPVYTAAREQLGGERGVSLRFPRFI 1125
Query: 73 KIRDDKDWKTATNLPEL 89
+IRDDK + +T PE
Sbjct: 1126 RIRDDKGVEDSTT-PEF 1141
>gi|222619063|gb|EEE55195.1| hypothetical protein OsJ_03041 [Oryza sativa Japonica Group]
Length = 1455
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 16/101 (15%)
Query: 13 YDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GI 64
Y G+R+ K Y+ P L A+ VWEI GA+ + + +H A GI
Sbjct: 1353 YSGDRILPKKP----VYYKTDELPELWFSAEQVWEIRGADLTLSPVHHAAIGLVHPSRGI 1408
Query: 65 SIRFPRVTKIRDDK---DWKTATNLPEL-KVLFKKSKETSD 101
S+R PR + R D+ D TAT++ L K +K + +SD
Sbjct: 1409 SVRMPRYIRSRPDRSPEDCSTATDVASLFKAQTRKMEVSSD 1449
>gi|355699361|gb|AES01102.1| ligase IV, DNA, ATP-dependent [Mustela putorius furo]
Length = 368
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%)
Query: 3 KNERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
K++ Y E K DGER+Q+HK+G E++YFSR+
Sbjct: 264 KHQSFYIETKLDGERMQMHKQGGEYQYFSRN 294
>gi|294892161|ref|XP_002773925.1| dna ligase i, putative [Perkinsus marinus ATCC 50983]
gi|239879129|gb|EER05741.1| dna ligase i, putative [Perkinsus marinus ATCC 50983]
Length = 784
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 10/75 (13%)
Query: 31 SRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD----------GISIRFPRVTKIRDDKDW 80
S + P + VWEI A+ S + +HT G+ +RFPR +IRDDK+
Sbjct: 702 SEKMTPDIWLDGTQVWEIQCADLSISPVHTGASNLIDGAGGKGVGLRFPRFIRIRDDKNP 761
Query: 81 KTATNLPELKVLFKK 95
+ AT +L ++++
Sbjct: 762 EDATTSEQLLQMYEQ 776
>gi|406960159|gb|EKD87314.1| hypothetical protein ACD_36C00150G0002 [uncultured bacterium]
Length = 515
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 45 VWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKK 95
V EI+G + ++++ H A G S+RFPR+ +IR DK T + E++ LFK+
Sbjct: 465 VLEIAGDDLTKSKKHGA-GYSVRFPRLVRIRPDKSPHEVTTVKEVETLFKQ 514
>gi|324506408|gb|ADY42738.1| DNA ligase 1 [Ascaris suum]
Length = 692
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 12/88 (13%)
Query: 22 KKGNEFKYFSRSLKPVLEHKAQP--VWEISGAEFSQAEIHTAD--------GISIRFPRV 71
+K + + SL+P +H +P VWE+ A+ S + H A GIS+RFPR
Sbjct: 592 EKARPYYSYDSSLEP--DHWFEPSVVWEVKAADLSISPKHHAARGIVDPEKGISLRFPRF 649
Query: 72 TKIRDDKDWKTATNLPELKVLFKKSKET 99
+IRDDK + AT+ ++ +++ ++
Sbjct: 650 IRIRDDKKPEEATSAEQVAEMYRSQEQV 677
>gi|391329203|ref|XP_003739065.1| PREDICTED: DNA ligase 4-like [Metaseiulus occidentalis]
Length = 741
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 40/90 (44%), Gaps = 20/90 (22%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSR-----------------SLKPVLEHKAQPVWEISGAE 52
EIK+DGERVQ HK NEF Y+SR SL L P +
Sbjct: 280 EIKFDGERVQCHKNQNEFSYYSRGYNEYSATYGTSGQHDNSLSSYLSRAIDP--HVVTCI 337
Query: 53 FSQAEIHTADGISIRFPRVTKIRDDKDWKT 82
F E+ + DGIS +F + RD K KT
Sbjct: 338 F-DGEMMSYDGISKKFVPKGRSRDLKKIKT 366
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 37 VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
++E K+ + + AE + + S+RFPRV+ +R DK WK EL L++++
Sbjct: 562 IIEPKSSVILTVKAAELVPTKSFMTE-CSMRFPRVSALRFDKPWKDCMRYSELAKLYRET 620
Query: 97 KET 99
K T
Sbjct: 621 KGT 623
>gi|330798081|ref|XP_003287084.1| hypothetical protein DICPUDRAFT_97591 [Dictyostelium purpureum]
gi|325082920|gb|EGC36387.1| hypothetical protein DICPUDRAFT_97591 [Dictyostelium purpureum]
Length = 1076
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 45 VWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKSKETSDFTL 104
V +I A+ + E + A G ++RFPRV KIRDDK W+ + ++ L+ K+ + +DF
Sbjct: 694 VVQIKAAQLNPTEKYKA-GYTLRFPRVLKIRDDKSWQDCSTFSDILELY-KNFQNNDFKF 751
Query: 105 K 105
K
Sbjct: 752 K 752
Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 20/24 (83%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSRS 33
E KYDGER Q+HK GN+ +++SR+
Sbjct: 393 EKKYDGERTQIHKDGNDIRFYSRN 416
>gi|159127519|gb|EDP52634.1| DNA ligase I, putative [Aspergillus fumigatus A1163]
Length = 833
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 8/72 (11%)
Query: 35 KPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNL 86
+P + + Q VWE++ A+ + + +TA G+S+RFPR ++RDDK AT
Sbjct: 741 EPDVWFEPQEVWEMAFADITLSPTYTAAIGLVSDERGLSLRFPRFLRVRDDKSIDEATTS 800
Query: 87 PELKVLFKKSKE 98
L +L++K E
Sbjct: 801 DYLALLWRKQAE 812
>gi|70999574|ref|XP_754505.1| DNA ligase I [Aspergillus fumigatus Af293]
gi|66852142|gb|EAL92467.1| DNA ligase I, putative [Aspergillus fumigatus Af293]
Length = 833
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 8/72 (11%)
Query: 35 KPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNL 86
+P + + Q VWE++ A+ + + +TA G+S+RFPR ++RDDK AT
Sbjct: 741 EPDVWFEPQEVWEMAFADITLSPTYTAAIGLVSDERGLSLRFPRFLRVRDDKSIDEATTS 800
Query: 87 PELKVLFKKSKE 98
L +L++K E
Sbjct: 801 DYLALLWRKQAE 812
>gi|417405223|gb|JAA49329.1| Putative atp-dependent dna ligase i [Desmodus rotundus]
Length = 911
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 24/31 (77%)
Query: 3 KNERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
KN+ Y E K DGER+Q+HK GN ++YFSR+
Sbjct: 264 KNQSFYIETKLDGERMQMHKDGNVYEYFSRN 294
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 21 HKKGNEFKYFSRSLKP--VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDK 78
HKK + KP +E + +I E ++++ G ++RFPR+ KIR+DK
Sbjct: 530 HKKAPPSSILCGTEKPEVYIEPCNSVIVQIKATEIVPSDMYKT-GCTLRFPRIEKIREDK 588
Query: 79 DWKTATNLPELKVLFKKS 96
+W L +L+ L K+
Sbjct: 589 EWHECMTLDDLEQLRGKA 606
>gi|321477879|gb|EFX88837.1| hypothetical protein DAPPUDRAFT_304798 [Daphnia pulex]
Length = 677
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 13/85 (15%)
Query: 30 FSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWK 81
F SL P + VWEI A+ S + +H A GIS+RFPR +IR DK+ +
Sbjct: 587 FDPSLSPDDWFEPVQVWEIKCADLSISPVHRAATGIVDPVKGISLRFPRFIRIRPDKNPE 646
Query: 82 TATNLPELKVLFK-----KSKETSD 101
AT+ ++ L+ K+K+T D
Sbjct: 647 NATSSEQIADLYNSQEQVKNKKTDD 671
>gi|170083931|ref|XP_001873189.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650741|gb|EDR14981.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 816
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 35 KPVLEHKAQPVWEISGAEFSQAEIHTAD-------GISIRFPRVTKIRDDKDWKTATNLP 87
KP + + + VWE+ A+ S + I+TA GIS+RFPR ++RDDK AT
Sbjct: 728 KPDIWFEPKIVWEVLTADLSLSPIYTAAQGLVEDRGISLRFPRFIRVRDDKGPDDATGPE 787
Query: 88 ELKVLFKK 95
++ ++++
Sbjct: 788 QIAEMYER 795
>gi|336244789|gb|AEI28312.1| ATP-dependent DNA ligase IV, partial [Anas platyrhynchos]
Length = 352
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 23/30 (76%)
Query: 4 NERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
N+ Y E K DGER+Q+HK G+ +KYFSR+
Sbjct: 180 NQTFYIETKLDGERIQMHKDGDVYKYFSRN 209
>gi|221482854|gb|EEE21185.1| DNA ligase 1 precursor, putative [Toxoplasma gondii GT1]
Length = 1119
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 17/104 (16%)
Query: 7 CYSEIKYDGERVQVHKKGNEFKYFSR-----SLKPVLEH----KAQPVWEISGAEFSQAE 57
C + + E +Q H K + S + P LE +A VWE A+ S +
Sbjct: 980 CKAATGFSEEALQQHHKALSDRIISHKKPYYDVSPKLEADVWFEACQVWECRAADLSISP 1039
Query: 58 IHTAD--------GISIRFPRVTKIRDDKDWKTATNLPELKVLF 93
+HTA GI +RFPR ++R+DK+ + AT ++ ++
Sbjct: 1040 VHTAGIGEKSPDKGIGLRFPRFLRVREDKNPEQATTSTQIVEMY 1083
>gi|95007356|emb|CAJ20576.1| DNA ligase, putative [Toxoplasma gondii RH]
Length = 785
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 17/104 (16%)
Query: 7 CYSEIKYDGERVQVHKKGNEFKYFSR-----SLKPVLEH----KAQPVWEISGAEFSQAE 57
C + + E +Q H K + S + P LE +A VWE A+ S +
Sbjct: 646 CKAATGFSEEALQQHHKALSDRIISHKKPYYDVSPKLEADVWFEACQVWECRAADLSISP 705
Query: 58 IHTAD--------GISIRFPRVTKIRDDKDWKTATNLPELKVLF 93
+HTA GI +RFPR ++R+DK+ + AT ++ ++
Sbjct: 706 VHTAGIGEKSPDKGIGLRFPRFLRVREDKNPEQATTSTQIVEMY 749
>gi|393217635|gb|EJD03124.1| ATP-dependent DNA ligase [Fomitiporia mediterranea MF3/22]
Length = 848
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 9/67 (13%)
Query: 31 SRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKT 82
S P + K Q VWEI GA+ + + + A G+S+RFPR ++RDDK T
Sbjct: 741 SGGYSPEVYFKPQEVWEIRGADITLSPVSVAALGLVSQDRGLSLRFPRFMRVRDDKAI-T 799
Query: 83 ATNLPEL 89
N PE
Sbjct: 800 DANTPEF 806
>gi|302781344|ref|XP_002972446.1| hypothetical protein SELMODRAFT_97073 [Selaginella moellendorffii]
gi|300159913|gb|EFJ26532.1| hypothetical protein SELMODRAFT_97073 [Selaginella moellendorffii]
Length = 638
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 37/61 (60%), Gaps = 8/61 (13%)
Query: 45 VWEISGAEFSQAEIH--------TADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
VWE+ A+ S + +H T+ GIS+RFPR+ ++R+DK + AT+ ++ L++
Sbjct: 565 VWEVKAADLSISPVHKAAYGELETSKGISLRFPRLLRMREDKKPEQATSSDQVVDLYRAQ 624
Query: 97 K 97
K
Sbjct: 625 K 625
>gi|302803492|ref|XP_002983499.1| hypothetical protein SELMODRAFT_422836 [Selaginella moellendorffii]
gi|300148742|gb|EFJ15400.1| hypothetical protein SELMODRAFT_422836 [Selaginella moellendorffii]
Length = 1172
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 3 KNERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
+ +R +E K+DG+R QVHK GNE +FSRS
Sbjct: 244 RGKRVIAECKFDGDRCQVHKDGNEVHFFSRS 274
>gi|302805053|ref|XP_002984278.1| hypothetical protein SELMODRAFT_119719 [Selaginella moellendorffii]
gi|300148127|gb|EFJ14788.1| hypothetical protein SELMODRAFT_119719 [Selaginella moellendorffii]
Length = 638
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 37/61 (60%), Gaps = 8/61 (13%)
Query: 45 VWEISGAEFSQAEIH--------TADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
VWE+ A+ S + +H T+ GIS+RFPR+ ++R+DK + AT+ ++ L++
Sbjct: 565 VWEVKAADLSISPVHKAAYGELETSKGISLRFPRLLRMREDKKPEQATSSDQVVDLYRAQ 624
Query: 97 K 97
K
Sbjct: 625 K 625
>gi|237840681|ref|XP_002369638.1| DNA ligase 1 precursor, putative [Toxoplasma gondii ME49]
gi|211967302|gb|EEB02498.1| DNA ligase 1 precursor, putative [Toxoplasma gondii ME49]
gi|221503354|gb|EEE29052.1| DNA ligase 1 precursor, putative [Toxoplasma gondii VEG]
Length = 1112
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 17/104 (16%)
Query: 7 CYSEIKYDGERVQVHKKGNEFKYFSR-----SLKPVLEH----KAQPVWEISGAEFSQAE 57
C + + E +Q H K + S + P LE +A VWE A+ S +
Sbjct: 973 CKAATGFSEEALQQHHKALSDRIISHKKPYYDVSPKLEADVWFEACQVWECRAADLSISP 1032
Query: 58 IHTAD--------GISIRFPRVTKIRDDKDWKTATNLPELKVLF 93
+HTA GI +RFPR ++R+DK+ + AT ++ ++
Sbjct: 1033 VHTAGIGEKSPDKGIGLRFPRFLRVREDKNPEQATTSTQIVEMY 1076
>gi|48477744|ref|YP_023450.1| ATP-dependent DNA ligase [Picrophilus torridus DSM 9790]
gi|48430392|gb|AAT43257.1| DNA ligase [Picrophilus torridus DSM 9790]
Length = 590
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 12/77 (15%)
Query: 33 SLKPVLEHKAQP--VWEISGAEFSQAEIHT--------ADGISIRFPRVTKIRDDKDWKT 82
S++P +H P V EI GAE + + +HT G+++RFPR+ K RDDK +
Sbjct: 512 SMEP--DHWIYPSLVLEIRGAEITVSPVHTCAMNIIEKGSGLALRFPRLIKPRDDKKPED 569
Query: 83 ATNLPELKVLFKKSKET 99
AT E+ ++K K+
Sbjct: 570 ATTTNEIIEMYKAQKKV 586
>gi|358058968|dbj|GAA95366.1| hypothetical protein E5Q_02023.1 [Mixia osmundae IAM 14324]
Length = 1404
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 9/76 (11%)
Query: 21 HKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVT 72
H+ G Y + P + + + VWE+ A+ S + ++TA G+S+RFPR
Sbjct: 1305 HECGKRGYYEVGTATPDVYFEPRVVWEVLAADLSLSPVYTAAREQLGGERGVSLRFPRFI 1364
Query: 73 KIRDDKDWKTATNLPE 88
+IRDDK + +T PE
Sbjct: 1365 RIRDDKGVEDSTT-PE 1379
>gi|47209217|emb|CAF93091.1| unnamed protein product [Tetraodon nigroviridis]
Length = 173
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 8/70 (11%)
Query: 32 RSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTA 83
+S++P L A VWE+ A+ S + ++ A GIS+RFPR ++RDDK + A
Sbjct: 85 QSVEPDLWLDAVQVWEVKCADLSLSPVYKAAMGLVDPEKGISLRFPRFLRVRDDKKPEDA 144
Query: 84 TNLPELKVLF 93
T ++ L+
Sbjct: 145 TTGAQIADLY 154
>gi|302784448|ref|XP_002973996.1| hypothetical protein SELMODRAFT_414166 [Selaginella moellendorffii]
gi|300158328|gb|EFJ24951.1| hypothetical protein SELMODRAFT_414166 [Selaginella moellendorffii]
Length = 1171
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 3 KNERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
+ +R +E K+DG+R QVHK GNE +FSRS
Sbjct: 244 RGKRVIAECKFDGDRCQVHKDGNEVHFFSRS 274
>gi|224471824|sp|Q6L195.2|DNLI_PICTO RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
Length = 585
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 12/77 (15%)
Query: 33 SLKPVLEHKAQP--VWEISGAEFSQAEIHT--------ADGISIRFPRVTKIRDDKDWKT 82
S++P +H P V EI GAE + + +HT G+++RFPR+ K RDDK +
Sbjct: 507 SMEP--DHWIYPSLVLEIRGAEITVSPVHTCAMNIIEKGSGLALRFPRLIKPRDDKKPED 564
Query: 83 ATNLPELKVLFKKSKET 99
AT E+ ++K K+
Sbjct: 565 ATTTNEIIEMYKAQKKV 581
>gi|332022772|gb|EGI63045.1| DNA ligase 1 [Acromyrmex echinatior]
Length = 914
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 45/84 (53%), Gaps = 12/84 (14%)
Query: 30 FSRSLKPVLEHKAQPV--WEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKD 79
F S +P +H +PV WEI A+ S + +H A GIS+RFPR +IR+DK
Sbjct: 822 FDSSHEP--DHWFEPVQVWEIKCADLSLSPVHRAAIGIVDPEKGISLRFPRFIRIREDKT 879
Query: 80 WKTATNLPELKVLFKKSKETSDFT 103
+ AT+ ++ ++ ++ + T
Sbjct: 880 CEQATSAQDVANMYNNQEQIKNKT 903
>gi|300176568|emb|CBK24233.2| unnamed protein product [Blastocystis hominis]
Length = 645
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 8/64 (12%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
VWE+ A+ S + +HTA GI++RFPR +IR+DK + AT ++ +K
Sbjct: 578 VWEVRAADLSISPVHTAAIGLVDADKGIALRFPRFVRIREDKKPEEATTAEQVVDFYKSQ 637
Query: 97 KETS 100
S
Sbjct: 638 ANVS 641
>gi|169622727|ref|XP_001804772.1| hypothetical protein SNOG_14590 [Phaeosphaeria nodorum SN15]
gi|111057010|gb|EAT78130.1| hypothetical protein SNOG_14590 [Phaeosphaeria nodorum SN15]
Length = 869
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Query: 28 KYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKD 79
+Y + P + + Q VWE++ A+ + + +TA G+S RFPR K+R+DK
Sbjct: 777 EYNGGAGTPDVWFEPQEVWEVAFADLTLSPTYTAAIGLVSEERGLSTRFPRFLKVREDKG 836
Query: 80 WKTATNLPELKVLFKK 95
AT EL L++K
Sbjct: 837 IDEATEAQELADLYRK 852
>gi|339246701|ref|XP_003374984.1| DNA ligase 1 [Trichinella spiralis]
gi|316971746|gb|EFV55486.1| DNA ligase 1 [Trichinella spiralis]
Length = 825
Score = 42.4 bits (98), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 12/74 (16%)
Query: 30 FSRSLKPVLEHKAQPV--WEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKD 79
+S S+ P +H PV WE+ A+ S + H A GIS+RFPR ++RDDK+
Sbjct: 727 YSSSIAP--DHWFDPVQVWEVKAADLSISPKHFAAIGIVDDEKGISLRFPRFIRVRDDKN 784
Query: 80 WKTATNLPELKVLF 93
+ AT E+ ++
Sbjct: 785 PEDATTAEEVAEIY 798
>gi|194373981|dbj|BAG62303.1| unnamed protein product [Homo sapiens]
Length = 612
Score = 42.4 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 8/65 (12%)
Query: 45 VWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
VWE+ A+ S + I+ A GIS+RFPR ++R+DK + AT ++ L++K
Sbjct: 534 VWEVKCADLSLSPIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQ 593
Query: 97 KETSD 101
+ +
Sbjct: 594 SQIQN 598
>gi|90079511|dbj|BAE89435.1| unnamed protein product [Macaca fascicularis]
Length = 612
Score = 42.4 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 8/65 (12%)
Query: 45 VWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
VWE+ A+ S + I+ A GIS+RFPR ++R+DK + AT ++ L++K
Sbjct: 534 VWEVKCADLSLSPIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQ 593
Query: 97 KETSD 101
+ +
Sbjct: 594 SQIQN 598
>gi|426201422|gb|EKV51345.1| hypothetical protein AGABI2DRAFT_214235 [Agaricus bisporus var.
bisporus H97]
Length = 822
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 7/57 (12%)
Query: 35 KPVLEHKAQPVWEISGAEFSQAEIHTAD-------GISIRFPRVTKIRDDKDWKTAT 84
KP + + + VWE+ A+ S + I+TA GIS+RFPR ++RDDK + AT
Sbjct: 736 KPDIWFEPKIVWEVLTADLSLSPIYTAAHGTVDERGISLRFPRFIRVRDDKHVEDAT 792
>gi|409083536|gb|EKM83893.1| hypothetical protein AGABI1DRAFT_51454 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 822
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 7/57 (12%)
Query: 35 KPVLEHKAQPVWEISGAEFSQAEIHTAD-------GISIRFPRVTKIRDDKDWKTAT 84
KP + + + VWE+ A+ S + I+TA GIS+RFPR ++RDDK + AT
Sbjct: 736 KPDIWFEPKIVWEVLTADLSLSPIYTAAHGTVDERGISLRFPRFIRVRDDKHVEDAT 792
>gi|417405259|gb|JAA49345.1| Putative atp-dependent dna ligase i [Desmodus rotundus]
Length = 919
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 8/65 (12%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
VWE+ A+ S + I+ A GIS+RFPR ++R+DK + AT ++ L++K
Sbjct: 841 VWEVKCADLSLSPIYPAARGLVDSEKGISLRFPRFIRVREDKKPEAATTSAQVACLYRKQ 900
Query: 97 KETSD 101
+ +
Sbjct: 901 SQIQN 905
>gi|297838379|ref|XP_002887071.1| ATP dependent DNA ligase family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297332912|gb|EFH63330.1| ATP dependent DNA ligase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 1413
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 17/95 (17%)
Query: 8 YSEIK--YDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--- 62
Y E+K Y G+++ K Y+ P + + VWEI GA+F+ + +H+A
Sbjct: 1309 YIEMKELYSGDKILTKKP----PYYRTGETPDMWFSTEVVWEIRGADFTVSPVHSAALGL 1364
Query: 63 -----GISIRFPR-VTKI--RDDKDWKTATNLPEL 89
GIS+RFPR + K+ R+ ++ TA ++ E+
Sbjct: 1365 VHPSRGISVRFPRFIRKVTDRNPEECSTAADIAEM 1399
>gi|170289904|ref|YP_001736720.1| ATP-dependent DNA ligase I [Candidatus Korarchaeum cryptofilum
OPF8]
gi|224487896|sp|B1L3K8.1|DNLI1_KORCO RecName: Full=DNA ligase 1; AltName: Full=Polydeoxyribonucleotide
synthase [ATP] 1
gi|170173984|gb|ACB07037.1| DNA ligase I, ATP-dependent Dnl1 [Candidatus Korarchaeum
cryptofilum OPF8]
Length = 541
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 23/32 (71%)
Query: 6 RCYSEIKYDGERVQVHKKGNEFKYFSRSLKPV 37
RC E K DG RVQVHK+G+E ++FSR + +
Sbjct: 230 RCALEYKLDGVRVQVHKRGDEVRFFSRRMSDI 261
>gi|409051591|gb|EKM61067.1| hypothetical protein PHACADRAFT_204217 [Phanerochaete carnosa
HHB-10118-sp]
Length = 843
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 35 KPVLEHKAQPVWEISGAEFSQAEIHTAD-------GISIRFPRVTKIRDDKDWKTATNLP 87
KP + + + VWE+ A+ S + ++TA GIS+RFPR ++RDDK AT
Sbjct: 754 KPDVWFEPKVVWEVLTADLSLSPVYTAAQGLADERGISLRFPRFIRVRDDKGADDATGPE 813
Query: 88 ELKVLFKK 95
++ ++++
Sbjct: 814 QIAEMYER 821
>gi|315630391|gb|ABC67301.2| DNA ligase [Pieris rapae granulovirus]
Length = 568
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 14/82 (17%)
Query: 43 QPVWEISGAEFSQAEIH-----TADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKSK 97
PVWE+ G I T + +SIR PR ++RDDK +K A + +L++L +
Sbjct: 485 MPVWEMEGDFIRSENIWNWGNVTRNYVSIRLPRFIRVRDDKTYKQANTIFDLQLLSSITN 544
Query: 98 ET------SDFTLKPKYDRIKN 113
+T +F L YD IKN
Sbjct: 545 KTFQYPELYNFYL---YDNIKN 563
>gi|164660400|ref|XP_001731323.1| hypothetical protein MGL_1506 [Malassezia globosa CBS 7966]
gi|159105223|gb|EDP44109.1| hypothetical protein MGL_1506 [Malassezia globosa CBS 7966]
Length = 701
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 7/67 (10%)
Query: 35 KPVLEHKAQPVWEISGAEFSQAEIHTAD-------GISIRFPRVTKIRDDKDWKTATNLP 87
KP + + + VWE+ A+ S + ++TA GIS+RFPR +IRDDK +T
Sbjct: 616 KPDVFFEPRIVWEVLAADLSLSPVYTAARGAIDARGISLRFPRFIRIRDDKSPDMSTTPE 675
Query: 88 ELKVLFK 94
++ +++
Sbjct: 676 QVASMYR 682
>gi|296241957|ref|YP_003649444.1| ATP-dependent DNA ligase I [Thermosphaera aggregans DSM 11486]
gi|296094541|gb|ADG90492.1| DNA ligase I, ATP-dependent Dnl1 [Thermosphaera aggregans DSM
11486]
Length = 611
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 40/85 (47%), Gaps = 17/85 (20%)
Query: 27 FKYFSRSLKP--VLEHKAQPVW-------EISGAEFSQAEIHTAD--------GISIRFP 69
K F R KP V+ VW EI GAE + + IHT GISIRFP
Sbjct: 510 LKPFIRDRKPLRVVAEMEPDVWVEPALVAEIIGAELTLSPIHTCAYGKIKPEAGISIRFP 569
Query: 70 RVTKIRDDKDWKTATNLPELKVLFK 94
R + RDDK + AT EL ++K
Sbjct: 570 RFIRWRDDKKPEDATTSDELVEMYK 594
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 7 CYSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEIS 49
+ E KYDGER Q+HK GN+ +SR L+ + H+ V E++
Sbjct: 264 AFVEFKYDGERAQIHKDGNKIVIYSRRLENI-THQYPDVVEMA 305
>gi|313235968|emb|CBY25113.1| unnamed protein product [Oikopleura dioica]
Length = 1020
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 8/57 (14%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNLPELKVLF 93
VWEI A+ S + +HTA GIS+RFPR + RDDK + AT+ ++ ++
Sbjct: 948 VWEIKCADLSISPVHTAATGLADPAKGISLRFPRFIRERDDKSPEMATSADQIYEMY 1004
>gi|154342041|ref|XP_001566972.1| putative DNA ligase I [Leishmania braziliensis MHOM/BR/75/M2904]
gi|134064297|emb|CAM40497.1| putative DNA ligase I [Leishmania braziliensis MHOM/BR/75/M2904]
Length = 776
Score = 42.4 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 27/95 (28%)
Query: 26 EFKYFSRSLKPVLEH------------------KAQPVWEISGAEFSQAEIHTA------ 61
E + ++SLKP + H +AQ VWE+ A+ S + +H A
Sbjct: 659 ELEKLTQSLKPFVVHDKPRYYRAGGEEPDVWLTEAQ-VWEVKAADLSVSPVHQAAVGLVD 717
Query: 62 --DGISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
GI++RFPR + R+DK+ ATN ++ ++K
Sbjct: 718 PNKGIALRFPRYVRQREDKNPVDATNTQQVAEMYK 752
>gi|63054532|ref|NP_593318.2| ATP-dependent DNA ligase Cdc17 [Schizosaccharomyces pombe 972h-]
gi|118774|sp|P12000.1|DNLI1_SCHPO RecName: Full=DNA ligase 1; AltName: Full=DNA ligase I; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 1
gi|4925|emb|CAA28754.1| DNA ligase [Schizosaccharomyces pombe]
gi|159883924|emb|CAB08176.2| ATP-dependent DNA ligase Cdc17 [Schizosaccharomyces pombe]
Length = 768
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 8/58 (13%)
Query: 45 VWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
+WE+ A+ S + ++ A GIS+RFPR +IR+DK W+ AT ++ ++
Sbjct: 692 LWEVLAADLSLSPVYKAAIGYVQEDKGISLRFPRFIRIREDKSWEDATTSEQVSEFYR 749
>gi|449017186|dbj|BAM80588.1| DNA ligase I [Cyanidioschyzon merolae strain 10D]
Length = 1028
Score = 42.4 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 8/72 (11%)
Query: 31 SRSLKPVLEHKAQPVWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDWKT 82
S S+KP + + VWE+ A+ S + + A GIS+RFPR+ +IR DK +
Sbjct: 928 SESVKPDIWLDPRQVWEVQCADLSISPAYVAACGYIAPDKGISVRFPRLLRIRSDKRPED 987
Query: 83 ATNLPELKVLFK 94
AT +L +++
Sbjct: 988 ATTSAQLAEMYR 999
>gi|313216156|emb|CBY37517.1| unnamed protein product [Oikopleura dioica]
Length = 951
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 8/57 (14%)
Query: 45 VWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDWKTATNLPELKVLF 93
VWEI A+ S + +HTA GIS+RFPR + RDDK + AT+ ++ ++
Sbjct: 879 VWEIKCADLSISPVHTAATGLADPAKGISLRFPRFIRERDDKSPEMATSADQIYEMY 935
>gi|392597419|gb|EIW86741.1| ATP-dependent DNA ligase [Coniophora puteana RWD-64-598 SS2]
Length = 834
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 35 KPVLEHKAQPVWEISGAEFSQAEIHTAD-------GISIRFPRVTKIRDDKDWKTATNLP 87
KP + + + VWE+ A+ S + ++TA GIS+RFPR ++RDDK AT
Sbjct: 746 KPDIWFEPKIVWEVLTADLSLSPVYTAAQGLVEERGISLRFPRFLRVRDDKSADDATGPE 805
Query: 88 ELKVLFKK 95
++ ++++
Sbjct: 806 QVAEMYER 813
>gi|390479226|ref|XP_002762363.2| PREDICTED: LOW QUALITY PROTEIN: DNA ligase 1-like [Callithrix
jacchus]
Length = 1009
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 8/65 (12%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
VWE+ A+ S + I+ A GIS+RFPR ++R+DK + AT ++ L++K
Sbjct: 930 VWEVKCADLSLSPIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQ 989
Query: 97 KETSD 101
+ +
Sbjct: 990 SQIQN 994
>gi|170181043|gb|ACB11498.1| putative DNA ligase [Pinus sylvestris]
Length = 168
Score = 42.4 bits (98), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD------- 62
E + D R +V K + + +L + + VWE+ A+ S + +H A
Sbjct: 75 EQRSDSLRNKVIPKPKPYYRYGETLGVDVWFEPSEVWEVKAADLSISPVHRAAAGAVDPN 134
Query: 63 -GISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
GIS+RFPR+ ++R+DK+ AT ++ +++
Sbjct: 135 KGISLRFPRLLRVREDKNPDQATTAEQVAEMYR 167
>gi|355755991|gb|EHH59738.1| hypothetical protein EGM_09925 [Macaca fascicularis]
Length = 1014
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
VWE+ A+ S + I+ A GIS+RFPR ++R+DK + AT ++ L++K
Sbjct: 936 VWEVKCADLSLSPIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQ 995
Query: 97 KE 98
+
Sbjct: 996 SQ 997
>gi|355703720|gb|EHH30211.1| hypothetical protein EGK_10828 [Macaca mulatta]
Length = 1014
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
VWE+ A+ S + I+ A GIS+RFPR ++R+DK + AT ++ L++K
Sbjct: 936 VWEVKCADLSLSPIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQ 995
Query: 97 KE 98
+
Sbjct: 996 SQ 997
>gi|336244797|gb|AEI28316.1| ATP-dependent DNA ligase IV, partial [Carettochelys insculpta]
Length = 352
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 4 NERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
++R Y E K DGER+Q+HK G+ +KYFSR+
Sbjct: 180 HQRFYIETKLDGERMQMHKDGDVYKYFSRN 209
>gi|426389527|ref|XP_004061171.1| PREDICTED: DNA ligase 1 [Gorilla gorilla gorilla]
Length = 906
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
VWE+ A+ S + I+ A GIS+RFPR ++R+DK + AT ++ L++K
Sbjct: 828 VWEVKCADLSLSPIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQ 887
Query: 97 KE 98
+
Sbjct: 888 SQ 889
>gi|32968197|emb|CAA80615.2| DNA ligase I [Crithidia fasciculata]
Length = 766
Score = 42.0 bits (97), Expect = 0.042, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 27/95 (28%)
Query: 26 EFKYFSRSLKPVLEH------------------KAQPVWEISGAEFSQAEIHTA------ 61
E + +++LKP + H +AQ VWE+ A+ S + +H A
Sbjct: 658 ELERLTQALKPFVVHDKPRYYRAEDDGPDVWLTEAQ-VWEVKAADLSVSPVHYAAIGLVD 716
Query: 62 --DGISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
GI++RFPR + RDDK ATN ++ ++K
Sbjct: 717 LNKGIALRFPRYIRERDDKKPADATNAQQVADMYK 751
>gi|403299141|ref|XP_003940348.1| PREDICTED: DNA ligase 1-like isoform 2 [Saimiri boliviensis
boliviensis]
Length = 850
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
VWE+ A+ S + I+ A GIS+RFPR ++R+DK + AT ++ L++K
Sbjct: 771 VWEVKCADLSLSPIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQ 830
Query: 97 KE 98
+
Sbjct: 831 SQ 832
>gi|406977514|gb|EKD99665.1| hypothetical protein ACD_22C00214G0006, partial [uncultured
bacterium]
Length = 373
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 52/96 (54%), Gaps = 2/96 (2%)
Query: 5 ERCYSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTADGI 64
E ++ +K + + ++ + N + S++ P + + V E+ E S++ HTA G
Sbjct: 279 EADFARLKAEADSQKIASQPNNVE-ISKNFYPNVWVNPKIVVELGADEISKSSTHTA-GY 336
Query: 65 SIRFPRVTKIRDDKDWKTATNLPELKVLFKKSKETS 100
++RFPR+ K R DK + T+L E++ ++K K S
Sbjct: 337 ALRFPRLIKFRTDKKPQDTTSLEEIEDIYKAQKRGS 372
>gi|336244809|gb|AEI28322.1| ATP-dependent DNA ligase IV, partial [Ichthyophis bannanicus]
Length = 351
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 23/30 (76%)
Query: 4 NERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
N+ Y E K DGER+Q+HK G+ +KYFSR+
Sbjct: 180 NQSFYIETKLDGERMQMHKDGDVYKYFSRN 209
>gi|336244803|gb|AEI28319.1| ATP-dependent DNA ligase IV, partial [Batrachuperus yenyuanensis]
Length = 352
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 23/30 (76%)
Query: 4 NERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
N+ Y E K DGER+Q+HK G+ +KYFSR+
Sbjct: 180 NQSFYIETKLDGERMQMHKDGDVYKYFSRN 209
>gi|682726|gb|AAB32750.1| DNA ligase II {C-terminal} [cattle, heart, Peptide Partial, 222
aa]
Length = 222
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 20/24 (83%), Positives = 21/24 (87%), Gaps = 1/24 (4%)
Query: 12 KYDGERVQVHKKGNEFKYFSRSLK 35
KYDGERVQVH KG+ F YFSRSLK
Sbjct: 1 KYDGERVQVH-KGDHFSYFSRSLK 23
Score = 37.7 bits (86), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 23/30 (76%), Gaps = 3/30 (10%)
Query: 45 VWEISGAEFSQAEIHTADGISIRFPRVTKI 74
VW I+GA S+A HTADGISIRFPR T I
Sbjct: 196 VW-ITGAFSSEA--HTADGISIRFPRXTXI 222
>gi|307212762|gb|EFN88433.1| DNA ligase 1 [Harpegnathos saltator]
Length = 826
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%), Gaps = 8/48 (16%)
Query: 45 VWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDWKTAT 84
VWEI A+ S + +H A GIS+RFPR +IR+DK+ + AT
Sbjct: 749 VWEIKCADLSLSPVHRAAIGIVDPEKGISLRFPRFIRIREDKNCEEAT 796
>gi|403299139|ref|XP_003940347.1| PREDICTED: DNA ligase 1-like isoform 1 [Saimiri boliviensis
boliviensis]
Length = 918
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
VWE+ A+ S + I+ A GIS+RFPR ++R+DK + AT ++ L++K
Sbjct: 839 VWEVKCADLSLSPIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQ 898
Query: 97 KE 98
+
Sbjct: 899 SQ 900
>gi|282165835|ref|NP_001164142.1| DNA ligase [Tribolium castaneum]
Length = 756
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 8/63 (12%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
VWE+ A+ S + +H A GIS+RFPR +IR+DK + AT+ ++ ++
Sbjct: 678 VWEVKCADLSLSPVHRAGIGIVDSEKGISLRFPRFVRIREDKSSEEATSSQQVASMYSNQ 737
Query: 97 KET 99
++
Sbjct: 738 EQV 740
>gi|194386400|dbj|BAG59764.1| unnamed protein product [Homo sapiens]
Length = 851
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
VWE+ A+ S + I+ A GIS+RFPR ++R+DK + AT ++ L++K
Sbjct: 773 VWEVKCADLSLSPIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQ 832
Query: 97 KE 98
+
Sbjct: 833 SQ 834
>gi|56967028|pdb|1X9N|A Chain A, Crystal Structure Of Human Dna Ligase I Bound To
5'-Adenylated, Nicked Dna
Length = 688
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 8/65 (12%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
VWE+ A+ S + I+ A GIS+RFPR ++R+DK + AT ++ L++K
Sbjct: 610 VWEVKCADLSLSPIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQ 669
Query: 97 KETSD 101
+ +
Sbjct: 670 SQIQN 674
>gi|397486056|ref|XP_003814149.1| PREDICTED: DNA ligase 1 isoform 2 [Pan paniscus]
Length = 851
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 8/65 (12%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
VWE+ A+ S + I+ A GIS+RFPR ++R+DK + AT ++ L++K
Sbjct: 773 VWEVKCADLSLSPIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQ 832
Query: 97 KETSD 101
+ +
Sbjct: 833 SQIQN 837
>gi|389742332|gb|EIM83519.1| ATP-dependent DNA ligase [Stereum hirsutum FP-91666 SS1]
Length = 934
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 35 KPVLEHKAQPVWEISGAEFSQAEIHTAD-------GISIRFPRVTKIRDDKDWKTATNLP 87
KP + + + VWE+ A+ S + ++TA GIS+RFPR ++RDDK AT
Sbjct: 846 KPDIWFEPKIVWEVLTADLSLSPVYTAAQGLVEERGISLRFPRFIRVRDDKGADDATGPE 905
Query: 88 ELKVLFKK 95
++ ++++
Sbjct: 906 QVAEMYER 913
>gi|270004895|gb|EFA01343.1| hypothetical protein TcasGA2_TC003800 [Tribolium castaneum]
Length = 592
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 8/65 (12%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
VWE+ A+ S + +H A GIS+RFPR +IR+DK + AT+ ++ ++
Sbjct: 514 VWEVKCADLSLSPVHRAGIGIVDSEKGISLRFPRFVRIREDKSSEEATSSQQVASMYSNQ 573
Query: 97 KETSD 101
++ +
Sbjct: 574 EQVKN 578
>gi|402217194|gb|EJT97275.1| ATP-dependent DNA ligase [Dacryopinax sp. DJM-731 SS1]
Length = 849
Score = 42.0 bits (97), Expect = 0.048, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
Query: 36 PVLEHKAQPVWEISGAEFS--------QAEIHTADGISIRFPRVTKIRDDKDWKTATNLP 87
P + K Q VWE+ GA+ + + I G+S+RFPR K+R+DK A+
Sbjct: 739 PSVYFKPQEVWEVRGADITISPTSVTAKGMIDPERGLSLRFPRFMKLREDKGIMNASTPE 798
Query: 88 ELKVLFKKSKETSD 101
++ ++++ + D
Sbjct: 799 DIAHMYRQQEARGD 812
>gi|336244799|gb|AEI28317.1| ATP-dependent DNA ligase IV, partial [Naja atra]
Length = 351
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 23/30 (76%)
Query: 4 NERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
N+ Y E K DGER+Q+HK G+ +KYFSR+
Sbjct: 180 NQTFYIETKLDGERMQMHKDGDVYKYFSRN 209
>gi|403299143|ref|XP_003940349.1| PREDICTED: DNA ligase 1-like isoform 3 [Saimiri boliviensis
boliviensis]
Length = 887
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
VWE+ A+ S + I+ A GIS+RFPR ++R+DK + AT ++ L++K
Sbjct: 808 VWEVKCADLSLSPIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQ 867
Query: 97 KE 98
+
Sbjct: 868 SQ 869
>gi|297705333|ref|XP_002829532.1| PREDICTED: LOW QUALITY PROTEIN: DNA ligase 1 [Pongo abelii]
Length = 920
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
VWE+ A+ S + I+ A GIS+RFPR ++R+DK + AT ++ L++K
Sbjct: 842 VWEVKCADLSLSPIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQ 901
Query: 97 KE 98
+
Sbjct: 902 SQ 903
>gi|297277489|ref|XP_002801368.1| PREDICTED: DNA ligase 1 isoform 4 [Macaca mulatta]
Length = 851
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
VWE+ A+ S + I+ A GIS+RFPR ++R+DK + AT ++ L++K
Sbjct: 773 VWEVKCADLSLSPIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQ 832
Query: 97 KE 98
+
Sbjct: 833 SQ 834
>gi|384940622|gb|AFI33916.1| DNA ligase 1 [Macaca mulatta]
Length = 919
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
VWE+ A+ S + I+ A GIS+RFPR ++R+DK + AT ++ L++K
Sbjct: 841 VWEVKCADLSLSPIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQ 900
Query: 97 KE 98
+
Sbjct: 901 SQ 902
>gi|269926505|ref|YP_003323128.1| ATP-dependent DNA ligase I [Thermobaculum terrenum ATCC BAA-798]
gi|269790165|gb|ACZ42306.1| DNA ligase I, ATP-dependent Dnl1 [Thermobaculum terrenum ATCC
BAA-798]
Length = 583
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Query: 6 RCYSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTA 61
+C E KYDG R QVHK GNE K FSR+ LE EI+ + + TA
Sbjct: 245 QCAVEKKYDGFRCQVHKIGNEVKIFSRN----LEDMTGMFPEITSGTLAMVDAETA 296
>gi|118387305|ref|XP_001026764.1| DNA ligase I, ATP-dependent [Tetrahymena thermophila]
gi|89308531|gb|EAS06519.1| DNA ligase I, ATP-dependent [Tetrahymena thermophila SB210]
Length = 635
Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 8/61 (13%)
Query: 32 RSLKP-VLEHKAQPVWEISGAEFSQAEIHTA-------DGISIRFPRVTKIRDDKDWKTA 83
R+ KP V K VWE+ S + I+T +GIS+RFPR ++RDDK + +
Sbjct: 549 RTFKPDVWFQKDAEVWEVESDSLSSSPIYTIGKMNYSDNGISLRFPRFLRVRDDKTTEQS 608
Query: 84 T 84
T
Sbjct: 609 T 609
>gi|402906130|ref|XP_003915857.1| PREDICTED: DNA ligase 1 isoform 2 [Papio anubis]
Length = 851
Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
VWE+ A+ S + I+ A GIS+RFPR ++R+DK + AT ++ L++K
Sbjct: 773 VWEVKCADLSLSPIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQ 832
Query: 97 KE 98
+
Sbjct: 833 SQ 834
>gi|336244805|gb|AEI28320.1| ATP-dependent DNA ligase IV, partial [Alligator sinensis]
Length = 352
Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 24/31 (77%), Gaps = 1/31 (3%)
Query: 4 NERC-YSEIKYDGERVQVHKKGNEFKYFSRS 33
N +C Y E K DGER+Q+HK G+ +KYFSR+
Sbjct: 179 NNQCFYIETKLDGERMQMHKDGDVYKYFSRN 209
>gi|4557719|ref|NP_000225.1| DNA ligase 1 [Homo sapiens]
gi|118773|sp|P18858.1|DNLI1_HUMAN RecName: Full=DNA ligase 1; AltName: Full=DNA ligase I; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 1
gi|21780372|gb|AAM77697.1|AF527418_1 ligase I, DNA, ATP-dependent [Homo sapiens]
gi|187143|gb|AAA59518.1| DNA ligase I [Homo sapiens]
gi|80474360|gb|AAI08319.1| Ligase I, DNA, ATP-dependent [Homo sapiens]
gi|119572701|gb|EAW52316.1| ligase I, DNA, ATP-dependent, isoform CRA_a [Homo sapiens]
gi|189054890|dbj|BAG36885.1| unnamed protein product [Homo sapiens]
Length = 919
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
VWE+ A+ S + I+ A GIS+RFPR ++R+DK + AT ++ L++K
Sbjct: 841 VWEVKCADLSLSPIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQ 900
Query: 97 KE 98
+
Sbjct: 901 SQ 902
>gi|336244807|gb|AEI28321.1| ATP-dependent DNA ligase IV, partial [Pelodiscus sinensis]
Length = 352
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 23/30 (76%)
Query: 4 NERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
N+ Y E K DGER+Q+HK G+ +KYFSR+
Sbjct: 180 NQSFYIETKLDGERMQMHKDGDVYKYFSRN 209
>gi|194390694|dbj|BAG62106.1| unnamed protein product [Homo sapiens]
Length = 888
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
VWE+ A+ S + I+ A GIS+RFPR ++R+DK + AT ++ L++K
Sbjct: 810 VWEVKCADLSLSPIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQ 869
Query: 97 KE 98
+
Sbjct: 870 SQ 871
>gi|119572702|gb|EAW52317.1| ligase I, DNA, ATP-dependent, isoform CRA_b [Homo sapiens]
Length = 889
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
VWE+ A+ S + I+ A GIS+RFPR ++R+DK + AT ++ L++K
Sbjct: 811 VWEVKCADLSLSPIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQ 870
Query: 97 KE 98
+
Sbjct: 871 SQ 872
>gi|76154970|gb|AAX26356.2| SJCHGC03478 protein [Schistosoma japonicum]
Length = 203
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 30 FSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWK 81
++ SL P + VWE+ A+ S + H A G+S+RFPR +IRDDK +
Sbjct: 110 YTSSLIPDQWFEPVQVWEVKAADLSISPAHKAAAGLVDPLKGVSLRFPRFIRIRDDKKPE 169
Query: 82 TATNLPELKVLFKKSKE 98
AT ++ L++ ++
Sbjct: 170 DATTAKQVYELYQSQEQ 186
>gi|397486054|ref|XP_003814148.1| PREDICTED: DNA ligase 1 isoform 1 [Pan paniscus]
Length = 919
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
VWE+ A+ S + I+ A GIS+RFPR ++R+DK + AT ++ L++K
Sbjct: 841 VWEVKCADLSLSPIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQ 900
Query: 97 KE 98
+
Sbjct: 901 SQ 902
>gi|383418319|gb|AFH32373.1| DNA ligase 1 [Macaca mulatta]
Length = 919
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
VWE+ A+ S + I+ A GIS+RFPR ++R+DK + AT ++ L++K
Sbjct: 841 VWEVKCADLSLSPIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQ 900
Query: 97 KE 98
+
Sbjct: 901 SQ 902
>gi|406925545|gb|EKD61995.1| hypothetical protein ACD_52C00325G0006 [uncultured bacterium]
Length = 571
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 53/92 (57%), Gaps = 6/92 (6%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVW--EISGAEFSQAEIHTADGIS 65
+ E+ +++++ K EF+ ++L+P ++ +PV EI+ + + HTA +
Sbjct: 484 FRELNRRLQKIKLRDKPKEFEV-HKNLEP--DNWVEPVVVVEIAADNITVSPTHTAR-YA 539
Query: 66 IRFPRVTKIRDDKDWKTATNLPELKVLFKKSK 97
+RFPR+ + RDDK K AT + ELK LF+ K
Sbjct: 540 LRFPRLVRFRDDKSPKQATTVSELKRLFELQK 571
>gi|402906132|ref|XP_003915858.1| PREDICTED: DNA ligase 1 isoform 3 [Papio anubis]
Length = 888
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
VWE+ A+ S + I+ A GIS+RFPR ++R+DK + AT ++ L++K
Sbjct: 810 VWEVKCADLSLSPIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQ 869
Query: 97 KE 98
+
Sbjct: 870 SQ 871
>gi|312080106|ref|XP_003142459.1| DNA ligase [Loa loa]
Length = 579
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 11/100 (11%)
Query: 7 CYSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD---- 62
CY+ I + E + K + + SLKP + + VWE+ A+ S + H A
Sbjct: 465 CYNPINEEYESIC---KARPYYSYDSSLKPDVWFDPKIVWEVKAADLSISPKHFAARGIV 521
Query: 63 ----GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKSKE 98
GIS+RFPR ++R DK + AT ++ ++ ++
Sbjct: 522 DQEKGISLRFPRYIRMRTDKTPEEATTSQQIADMYNNQEQ 561
>gi|109125447|ref|XP_001111346.1| PREDICTED: DNA ligase 1 isoform 1 [Macaca mulatta]
Length = 919
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
VWE+ A+ S + I+ A GIS+RFPR ++R+DK + AT ++ L++K
Sbjct: 841 VWEVKCADLSLSPIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQ 900
Query: 97 KE 98
+
Sbjct: 901 SQ 902
>gi|397486058|ref|XP_003814150.1| PREDICTED: DNA ligase 1 isoform 3 [Pan paniscus]
Length = 888
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
VWE+ A+ S + I+ A GIS+RFPR ++R+DK + AT ++ L++K
Sbjct: 810 VWEVKCADLSLSPIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQ 869
Query: 97 KE 98
+
Sbjct: 870 SQ 871
>gi|336244791|gb|AEI28313.1| ATP-dependent DNA ligase IV, partial [Scincella reevesii]
Length = 342
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 23/30 (76%)
Query: 4 NERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
N+ Y E K DGER+Q+HK G+ +KYFSR+
Sbjct: 180 NQSFYIETKLDGERMQMHKDGDVYKYFSRN 209
>gi|297277487|ref|XP_002801367.1| PREDICTED: DNA ligase 1 isoform 3 [Macaca mulatta]
Length = 888
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
VWE+ A+ S + I+ A GIS+RFPR ++R+DK + AT ++ L++K
Sbjct: 810 VWEVKCADLSLSPIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQ 869
Query: 97 KE 98
+
Sbjct: 870 SQ 871
>gi|402906128|ref|XP_003915856.1| PREDICTED: DNA ligase 1 isoform 1 [Papio anubis]
Length = 919
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
VWE+ A+ S + I+ A GIS+RFPR ++R+DK + AT ++ L++K
Sbjct: 841 VWEVKCADLSLSPIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQ 900
Query: 97 KE 98
+
Sbjct: 901 SQ 902
>gi|410221310|gb|JAA07874.1| ligase I, DNA, ATP-dependent [Pan troglodytes]
gi|410251416|gb|JAA13675.1| ligase I, DNA, ATP-dependent [Pan troglodytes]
gi|410288274|gb|JAA22737.1| ligase I, DNA, ATP-dependent [Pan troglodytes]
gi|410353221|gb|JAA43214.1| ligase I, DNA, ATP-dependent [Pan troglodytes]
Length = 919
Score = 42.0 bits (97), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
VWE+ A+ S + I+ A GIS+RFPR ++R+DK + AT ++ L++K
Sbjct: 841 VWEVKCADLSLSPIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQ 900
Query: 97 KE 98
+
Sbjct: 901 SQ 902
>gi|156523208|ref|NP_001096018.1| DNA ligase 1 [Bos taurus]
gi|134025125|gb|AAI34519.1| LIG1 protein [Bos taurus]
gi|296477394|tpg|DAA19509.1| TPA: DNA ligase (ATP) 1 [Bos taurus]
Length = 916
Score = 42.0 bits (97), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 8/65 (12%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
VWE+ A+ S + I+ A GIS+RFPR ++R+DK + AT ++ L+KK
Sbjct: 838 VWEVKCADLSLSPIYPAARGLVDSEKGISLRFPRFIRVREDKKPEQATTSAQVAGLYKKQ 897
Query: 97 KETSD 101
+ +
Sbjct: 898 SQIQN 902
>gi|299115435|emb|CBN75600.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1043
Score = 41.6 bits (96), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 10/63 (15%)
Query: 33 SLKPVLEHKAQPVWEISGAEFSQAEIHTAD----------GISIRFPRVTKIRDDKDWKT 82
SL P + VWE+ A+ S++ +H A GISIRFPR+ + R+DKD +
Sbjct: 948 SLSPDVWLAPHKVWEVKCADLSKSPVHKAAIGKIAQEPDRGISIRFPRLLREREDKDPEQ 1007
Query: 83 ATN 85
AT
Sbjct: 1008 ATT 1010
>gi|440906381|gb|ELR56651.1| DNA ligase 1, partial [Bos grunniens mutus]
Length = 917
Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 8/65 (12%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
VWE+ A+ S + I+ A GIS+RFPR ++R+DK + AT ++ L+KK
Sbjct: 839 VWEVKCADLSLSPIYPAARGLVDSEKGISLRFPRFIRVREDKKPEQATTSAQVAGLYKKQ 898
Query: 97 KETSD 101
+ +
Sbjct: 899 SQIQN 903
>gi|380798769|gb|AFE71260.1| DNA ligase 1, partial [Macaca mulatta]
Length = 443
Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 8/65 (12%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
VWE+ A+ S + I+ A GIS+RFPR ++R+DK + AT ++ L++K
Sbjct: 365 VWEVKCADLSLSPIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQ 424
Query: 97 KETSD 101
+ +
Sbjct: 425 SQIQN 429
>gi|168050205|ref|XP_001777550.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671035|gb|EDQ57593.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 656
Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 8/61 (13%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
VWE+ A+ S + +H A GIS+RFPR+ ++R+DK AT+ ++ +++
Sbjct: 582 VWEVKAADLSISPVHRAAVGLVDPNKGISLRFPRLMRLREDKTPVEATSAQQVAEMYRAQ 641
Query: 97 K 97
K
Sbjct: 642 K 642
>gi|297277484|ref|XP_002801366.1| PREDICTED: DNA ligase 1 isoform 2 [Macaca mulatta]
Length = 975
Score = 41.6 bits (96), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
VWE+ A+ S + I+ A GIS+RFPR ++R+DK + AT ++ L++K
Sbjct: 897 VWEVKCADLSLSPIYPAARGLVDSDKGISLRFPRFIRVREDKQPEQATTSAQVACLYRKQ 956
Query: 97 KE 98
+
Sbjct: 957 SQ 958
>gi|196002285|ref|XP_002111010.1| hypothetical protein TRIADDRAFT_50031 [Trichoplax adhaerens]
gi|190586961|gb|EDV27014.1| hypothetical protein TRIADDRAFT_50031 [Trichoplax adhaerens]
Length = 924
Score = 41.6 bits (96), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 1 MAKNERCYSEIKYDGERVQVHKKGNEFKYFSRSLK 35
+ +E Y E K DG+R+Q+HK GN++ YFSRS K
Sbjct: 257 LMNHEMFYIECKADGDRMQLHKDGNKYMYFSRSSK 291
>gi|20089613|ref|NP_615688.1| DNA ligase (ATP) [Methanosarcina acetivorans C2A]
gi|74533835|sp|Q8TSR7.1|DNLI1_METAC RecName: Full=DNA ligase 1; AltName: Full=Polydeoxyribonucleotide
synthase [ATP] 1
gi|19914533|gb|AAM04168.1| DNA ligase (ATP) [Methanosarcina acetivorans C2A]
Length = 580
Score = 41.6 bits (96), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 23/29 (79%)
Query: 9 SEIKYDGERVQVHKKGNEFKYFSRSLKPV 37
+E KYDGERVQ+HK G+E K FSR L+ +
Sbjct: 244 AEEKYDGERVQIHKAGDEIKAFSRRLEDI 272
>gi|225851429|ref|YP_002731663.1| ATP-dependent DNA ligase [Persephonella marina EX-H1]
gi|254778144|sp|C0QSL7.1|DNLI_PERMH RecName: Full=Probable DNA ligase; AltName:
Full=Polydeoxyribonucleotide synthase [ATP]
gi|225645043|gb|ACO03229.1| DNA ligase (Polydeoxyribonucleotide synthase [ATP])(Lig(Tk))
[Persephonella marina EX-H1]
Length = 582
Score = 41.6 bits (96), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 24/32 (75%)
Query: 9 SEIKYDGERVQVHKKGNEFKYFSRSLKPVLEH 40
+E KYDGER+QVH+KG+ F FSR L+ + +
Sbjct: 247 AEYKYDGERIQVHRKGDTFYLFSRRLENITDQ 278
>gi|296188957|ref|XP_002742576.1| PREDICTED: DNA ligase 4 isoform 1 [Callithrix jacchus]
Length = 911
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 45 VWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
+ +I AE ++I+ G ++RFPR+ KIRDDK+W L +L+ L K+
Sbjct: 556 IVQIKAAEIVPSDIYKT-GCTLRFPRIEKIRDDKEWHECMTLDDLEQLRGKA 606
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 3 KNERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
K++ Y E K DGER+Q+HK G+ +KYFSR+
Sbjct: 264 KHQTFYIETKLDGERMQMHKDGDVYKYFSRN 294
>gi|213401441|ref|XP_002171493.1| DNA ligase [Schizosaccharomyces japonicus yFS275]
gi|211999540|gb|EEB05200.1| DNA ligase [Schizosaccharomyces japonicus yFS275]
Length = 730
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 35/58 (60%), Gaps = 8/58 (13%)
Query: 45 VWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
+WEI A+ S + ++ A G+S+RFPR + R+DK+W+ AT+ ++ +++
Sbjct: 656 LWEILAADLSLSPVYKAAIGYISEDKGVSLRFPRFVREREDKNWEEATSAEQIAEMYR 713
>gi|354475980|ref|XP_003500203.1| PREDICTED: LOW QUALITY PROTEIN: DNA ligase 1-like [Cricetulus
griseus]
Length = 931
Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 8/65 (12%)
Query: 45 VWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
VWE+ A+ S + I+ A GIS+RFPR ++R+DK + AT ++ L++K
Sbjct: 853 VWEVKCADLSLSPIYPAARGLVDKEKGISLRFPRFIRVREDKQPEQATTSDQVACLYRKQ 912
Query: 97 KETSD 101
+ +
Sbjct: 913 SQIQN 917
>gi|328719935|ref|XP_001943404.2| PREDICTED: DNA ligase 1-like [Acyrthosiphon pisum]
Length = 843
Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 8/72 (11%)
Query: 30 FSRSLKPVLEHKAQPVWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDWK 81
F +S +P + VWEI A+ S + +H A GIS+RFPR +IR+DK +
Sbjct: 752 FDQSHEPDHWFETVQVWEIKCADLSLSPVHRAALGIVDPEKGISLRFPRFLRIREDKSIE 811
Query: 82 TATNLPELKVLF 93
+T+ ++ L+
Sbjct: 812 QSTSAQQIAELY 823
>gi|410982858|ref|XP_003997763.1| PREDICTED: LOW QUALITY PROTEIN: DNA ligase 1 [Felis catus]
Length = 903
Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 45 VWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
VWE+ A+ S + I+ A GIS+RFPR ++R+DK + AT ++ L+KK
Sbjct: 825 VWEVKCADLSLSPIYPAARGLVDSEKGISLRFPRFIRVREDKKPEEATTSAQVASLYKKQ 884
Query: 97 KE 98
+
Sbjct: 885 SQ 886
>gi|392593814|gb|EIW83139.1| DNA ligase [Coniophora puteana RWD-64-598 SS2]
Length = 780
Score = 41.6 bits (96), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 8/58 (13%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
VWE+ GA+ + + + A G+S+RFPR ++RDDK + AT+ +L L++
Sbjct: 688 VWEVRGADITISPVSVASLGSASATRGLSLRFPRFIRVRDDKAIEDATSTEQLTELWR 745
>gi|344244700|gb|EGW00804.1| DNA ligase 1 [Cricetulus griseus]
Length = 636
Score = 41.6 bits (96), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 8/65 (12%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
VWE+ A+ S + I+ A GIS+RFPR ++R+DK + AT ++ L++K
Sbjct: 558 VWEVKCADLSLSPIYPAARGLVDKEKGISLRFPRFIRVREDKQPEQATTSDQVACLYRKQ 617
Query: 97 KETSD 101
+ +
Sbjct: 618 SQIQN 622
>gi|431920819|gb|ELK18592.1| DNA ligase 1 [Pteropus alecto]
Length = 926
Score = 41.6 bits (96), Expect = 0.064, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 10/73 (13%)
Query: 39 EHKAQP--VWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDWKTATNLPE 88
+H +P VWE+ A+ S + I+ A G+S+RFPR ++R+DK + AT +
Sbjct: 840 DHWLEPSAVWEVKCADLSLSPIYPAARGLVDSEKGVSLRFPRFIRVREDKKPEEATTSAQ 899
Query: 89 LKVLFKKSKETSD 101
+ L++K + +
Sbjct: 900 VACLYRKQSQVQN 912
>gi|301765093|ref|XP_002917926.1| PREDICTED: DNA ligase 1-like [Ailuropoda melanoleuca]
Length = 911
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
VWE+ A+ S + I+ A GIS+RFPR +IR+DK + AT ++ L++K
Sbjct: 833 VWEVKCADLSLSPIYPAARGLVDGEKGISLRFPRFIRIREDKKPEEATTSAQVASLYRKQ 892
Query: 97 KE 98
+
Sbjct: 893 SQ 894
>gi|358334728|dbj|GAA27477.2| DNA ligase 4, partial [Clonorchis sinensis]
Length = 959
Score = 41.6 bits (96), Expect = 0.065, Method: Composition-based stats.
Identities = 16/24 (66%), Positives = 20/24 (83%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSRS 33
E KYDGERVQVHK G ++Y+SR+
Sbjct: 299 ETKYDGERVQVHKSGTSYRYWSRN 322
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 61 ADGISIRFPRVTKIRDDKDWKTATNLPEL 89
A G++ RFPRV +RDDK W+ + EL
Sbjct: 666 ATGLTARFPRVVAVRDDKPWQDCLTMEEL 694
>gi|350645177|emb|CCD60119.1| DNA ligase I, putative [Schistosoma mansoni]
Length = 749
Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 8/84 (9%)
Query: 23 KGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKI 74
K + ++ SL P + VWE+ A+ S + H A GIS+RFPR +I
Sbjct: 647 KAKPYYQYTISLIPDQWFEPVQVWEVKAADLSISPGHKAAAGLADPQKGISLRFPRFVRI 706
Query: 75 RDDKDWKTATNLPELKVLFKKSKE 98
RDDK + AT ++ L++ ++
Sbjct: 707 RDDKKPEDATTAQQVYELYQNQEQ 730
>gi|356927698|gb|AET42488.1| DNA ligase [Emiliania huxleyi virus 202]
Length = 622
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 8/61 (13%)
Query: 33 SLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTAT 84
SLKP + VWE+ A+ S + +H A GI++RFPR ++R DK+ AT
Sbjct: 547 SLKPDVWFIPTQVWEVLSADLSISPVHMAGHGIVDPSKGIALRFPRFIRVRKDKNITDAT 606
Query: 85 N 85
Sbjct: 607 T 607
>gi|348551158|ref|XP_003461397.1| PREDICTED: DNA ligase 1-like [Cavia porcellus]
Length = 919
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 45 VWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
VWE+ A+ S + I+ A GIS+RFPR ++R+DK + AT ++ L++K
Sbjct: 842 VWEVKCADLSLSPIYPAARGLVDSEKGISLRFPRFIRVREDKKPEEATTSAQVACLYRKQ 901
Query: 97 KE 98
+
Sbjct: 902 SQ 903
>gi|336116829|ref|YP_004571596.1| ATP-dependent DNA ligase [Microlunatus phosphovorus NM-1]
gi|334684608|dbj|BAK34193.1| ATP-dependent DNA ligase [Microlunatus phosphovorus NM-1]
Length = 530
Score = 41.6 bits (96), Expect = 0.067, Method: Composition-based stats.
Identities = 17/32 (53%), Positives = 24/32 (75%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLE 39
Y+++K DG RVQVH+ G+E + FSRSL + E
Sbjct: 207 YADVKLDGIRVQVHRLGDEVRIFSRSLDDITE 238
>gi|422293754|gb|EKU21054.1| dna ligase, partial [Nannochloropsis gaditana CCMP526]
gi|422295238|gb|EKU22537.1| dna ligase, partial [Nannochloropsis gaditana CCMP526]
Length = 249
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 8/49 (16%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATN 85
VWE+ GAE + + +H A G S+RFPR KIR DK + AT
Sbjct: 201 VWEVRGAELTLSPVHKAGVGIVDAQRGFSLRFPRFLKIRSDKGVEDATT 249
>gi|386002175|ref|YP_005920474.1| DNA ligase [Methanosaeta harundinacea 6Ac]
gi|357210231|gb|AET64851.1| DNA ligase [Methanosaeta harundinacea 6Ac]
Length = 560
Score = 41.6 bits (96), Expect = 0.067, Method: Composition-based stats.
Identities = 17/28 (60%), Positives = 22/28 (78%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSRSLKPV 37
E+KYDG RVQ+HK+G E + FSR L+ V
Sbjct: 248 EVKYDGSRVQIHKRGEEVEIFSRRLERV 275
Score = 36.2 bits (82), Expect = 2.5, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 38 LEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKSK 97
+E K + V+E++ E +++ +++ G ++RFPR+ +IRDDK + A L + L+ +
Sbjct: 494 VEVKPEVVFEVAFEEIQKSKSYSS-GYALRFPRLVRIRDDKAVEEADTLDRVAGLYATQR 552
>gi|281348405|gb|EFB23989.1| hypothetical protein PANDA_006333 [Ailuropoda melanoleuca]
Length = 909
Score = 41.6 bits (96), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
VWE+ A+ S + I+ A GIS+RFPR +IR+DK + AT ++ L++K
Sbjct: 831 VWEVKCADLSLSPIYPAARGLVDGEKGISLRFPRFIRIREDKKPEEATTSAQVASLYRKQ 890
Query: 97 KE 98
+
Sbjct: 891 SQ 892
>gi|256074242|ref|XP_002573435.1| DNA ligase I [Schistosoma mansoni]
Length = 752
Score = 41.6 bits (96), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 8/84 (9%)
Query: 23 KGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKI 74
K + ++ SL P + VWE+ A+ S + H A GIS+RFPR +I
Sbjct: 650 KAKPYYQYTISLIPDQWFEPVQVWEVKAADLSISPGHKAAAGLADPQKGISLRFPRFVRI 709
Query: 75 RDDKDWKTATNLPELKVLFKKSKE 98
RDDK + AT ++ L++ ++
Sbjct: 710 RDDKKPEDATTAQQVYELYQNQEQ 733
>gi|392571467|gb|EIW64639.1| ATP-dependent DNA ligase [Trametes versicolor FP-101664 SS1]
Length = 692
Score = 41.6 bits (96), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 7/68 (10%)
Query: 35 KPVLEHKAQPVWEISGAEFSQAEIHTAD-------GISIRFPRVTKIRDDKDWKTATNLP 87
KP + + + VWE+ A+ S + I+TA GIS+RFPR +IR+DK AT
Sbjct: 602 KPDVWLEPKVVWEVLTADLSLSPIYTAAQGLVEERGISLRFPRFIRIREDKAADDATGPE 661
Query: 88 ELKVLFKK 95
++ ++++
Sbjct: 662 QIAEMYQR 669
>gi|226478780|emb|CAX72885.1| ligase I, DNA, ATP-dependent [Schistosoma japonicum]
Length = 840
Score = 41.6 bits (96), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 8/84 (9%)
Query: 23 KGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKI 74
K + ++ SL P + VWE+ A+ S + H A G+S+RFPR +I
Sbjct: 740 KAKPYYQYTSSLIPDQWFEPVQVWEVKAADLSISPAHKAAAGLVDPLKGVSLRFPRFIRI 799
Query: 75 RDDKDWKTATNLPELKVLFKKSKE 98
RDDK + AT ++ L++ ++
Sbjct: 800 RDDKKPEDATTAKQVYELYQSQEQ 823
>gi|400601718|gb|EJP69343.1| DNA ligase I [Beauveria bassiana ARSEF 2860]
Length = 867
Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 10/111 (9%)
Query: 4 NERCYSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD- 62
N+ Y + GE H + F +S + P + + Q VWE++ A+ + + +TA
Sbjct: 748 NKAFYDDGSETGEPKNTHLQMPSFIEYSGPM-PDVWFEPQEVWEMAFADITLSPTYTAAI 806
Query: 63 -------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKSKETSDFTLKP 106
G+S+RFPR K RDDK + A+ L L++K +E S T P
Sbjct: 807 GLVSDERGLSLRFPRFLKKRDDKGIEEASTNEFLAGLWRK-QEVSASTTGP 856
>gi|260807401|ref|XP_002598497.1| hypothetical protein BRAFLDRAFT_118305 [Branchiostoma floridae]
gi|229283770|gb|EEN54509.1| hypothetical protein BRAFLDRAFT_118305 [Branchiostoma floridae]
Length = 793
Score = 41.6 bits (96), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 24/32 (75%)
Query: 4 NERCYSEIKYDGERVQVHKKGNEFKYFSRSLK 35
+E Y E K+DGER+ +HK G+ +KYFSRS K
Sbjct: 239 HEMFYIETKFDGERMLLHKNGDTYKYFSRSGK 270
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
Query: 51 AEFSQAEIHTAD----GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
+ AEI +D G ++RFPR+ K+RDDK+W L EL + K S
Sbjct: 537 VQIKAAEIIESDKFKTGCTLRFPRLEKVRDDKEWFDCMTLEELDDMRKVS 586
>gi|428168931|gb|EKX37870.1| hypothetical protein GUITHDRAFT_158553 [Guillardia theta CCMP2712]
Length = 672
Score = 41.2 bits (95), Expect = 0.071, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 8/61 (13%)
Query: 45 VWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
VWEIS A+ S + HTA GI++RFPR + R++K AT ++K +F +
Sbjct: 599 VWEISAADLSLSPQHTACYGVVHASRGIALRFPRFVREREEKGASQATTSQQVKEIFSQQ 658
Query: 97 K 97
+
Sbjct: 659 R 659
>gi|58270892|ref|XP_572602.1| DNA ligase [Cryptococcus neoformans var. neoformans JEC21]
gi|134115296|ref|XP_773946.1| hypothetical protein CNBH3980 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256574|gb|EAL19299.1| hypothetical protein CNBH3980 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57228861|gb|AAW45295.1| DNA ligase, putative [Cryptococcus neoformans var. neoformans
JEC21]
Length = 803
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 7/68 (10%)
Query: 35 KPVLEHKAQPVWEISGAEFSQAEIHTAD-------GISIRFPRVTKIRDDKDWKTATNLP 87
KP + + + VWE+ A+ S + I+ A GIS+RFPR +IRDDK AT
Sbjct: 718 KPDVWFEPRVVWEVLTADLSLSPIYAAAHGVIDSRGISLRFPRFIRIRDDKSADEATTAE 777
Query: 88 ELKVLFKK 95
++ +++
Sbjct: 778 QVSEFYQR 785
>gi|344269407|ref|XP_003406544.1| PREDICTED: DNA ligase 1 [Loxodonta africana]
Length = 917
Score = 41.2 bits (95), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 8/58 (13%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
VWE+ A+ S + I+ A GIS+RFPR +IRDDK + AT ++ L++
Sbjct: 839 VWEVKCADLSLSPIYPAARGLVDREKGISLRFPRFIRIRDDKKPEEATTSAQVAQLYQ 896
>gi|347524512|ref|YP_004782082.1| DNA ligase I, ATP-dependent Dnl1 [Pyrolobus fumarii 1A]
gi|343461394|gb|AEM39830.1| DNA ligase I, ATP-dependent Dnl1 [Pyrolobus fumarii 1A]
Length = 609
Score = 41.2 bits (95), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 8/70 (11%)
Query: 34 LKPVLEHKAQPVWEISGAEFSQAEIHT--------ADGISIRFPRVTKIRDDKDWKTATN 85
+KP + + V EI GAE + + IHT GISIRFPR + R DK + AT
Sbjct: 525 MKPDVWVQPALVAEIIGAELTLSPIHTCCHGWVKPGAGISIRFPRFIRWRPDKSPEDATT 584
Query: 86 LPELKVLFKK 95
EL ++K+
Sbjct: 585 TKELYEMYKR 594
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 22/32 (68%)
Query: 6 RCYSEIKYDGERVQVHKKGNEFKYFSRSLKPV 37
R E KYDGER Q+HKKG++ FSR L+ +
Sbjct: 262 RALVEYKYDGERAQIHKKGDKIWIFSRRLENI 293
>gi|443918397|gb|ELU38877.1| DNA ligase I [Rhizoctonia solani AG-1 IA]
Length = 1084
Score = 41.2 bits (95), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 35 KPVLEHKAQPVWEISGAEFSQAEIHTA---DGISIRFPRVTKIRDDKDWKTATNLPELKV 91
KP + + + VWE+ A+ S + ++ A GIS+RFPR ++RDDK AT ++
Sbjct: 1000 KPDIWFEPKVVWEVLTADLSLSPVYEAVDDRGISLRFPRFIRVRDDKSADDATEPSQIAE 1059
Query: 92 LFKK 95
++++
Sbjct: 1060 MYER 1063
>gi|6579215|gb|AAF18258.1|AC011438_20 T23G18.1 [Arabidopsis thaliana]
Length = 794
Score = 41.2 bits (95), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 36/61 (59%), Gaps = 8/61 (13%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
VWE+ A+ + + +H A GIS+RFPR+ ++R+DK + AT+ ++ L++
Sbjct: 721 VWEVKAADLTISPVHRAATGIVDPDKGISLRFPRLLRVREDKKPEEATSSEQIADLYQAQ 780
Query: 97 K 97
K
Sbjct: 781 K 781
>gi|26350485|dbj|BAC38882.1| unnamed protein product [Mus musculus]
Length = 845
Score = 41.2 bits (95), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 21 HKKGNEFKYFSRSLKP--VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDK 78
HKK + KP +E + + +I AE ++++ G ++RFPR+ KIRDDK
Sbjct: 464 HKKSPPSSILCGTEKPEVYIEPQNSVIVQIKAAEIVPSDMYKT-GSTLRFPRIEKIRDDK 522
Query: 79 DWKTATNLPELKVLFKKS 96
+W L +L+ L K+
Sbjct: 523 EWHECMTLGDLEQLRGKA 540
Score = 38.1 bits (87), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 3 KNERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
K + Y E K DGER+Q+HK G ++YFSR+
Sbjct: 198 KQQSFYIETKLDGERMQMHKDGALYRYFSRN 228
>gi|8778834|gb|AAF79833.1|AC026875_13 T6D22.23 [Arabidopsis thaliana]
Length = 839
Score = 41.2 bits (95), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 36/61 (59%), Gaps = 8/61 (13%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
VWE+ A+ + + +H A GIS+RFPR+ ++R+DK + AT+ ++ L++
Sbjct: 715 VWEVKAADLTISPVHRAATGIVDPDKGISLRFPRLLRVREDKKPEEATSSEQIADLYQAQ 774
Query: 97 K 97
K
Sbjct: 775 K 775
>gi|255574286|ref|XP_002528057.1| DNA ligase I, putative [Ricinus communis]
gi|223532518|gb|EEF34307.1| DNA ligase I, putative [Ricinus communis]
Length = 1360
Score = 41.2 bits (95), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 14/105 (13%)
Query: 8 YSEIK--YDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--- 62
Y+E+K + G+R+ + K Y+ + P + VWEI GAEF+ + +H A
Sbjct: 1256 YTEMKEYFSGDRILLKKP----HYYRTAEVPDKWFSPEVVWEIRGAEFTVSPVHQAAVGL 1311
Query: 63 -----GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKSKETSDF 102
GIS+RFPR + D++ + + ++ +F D
Sbjct: 1312 VHPSRGISMRFPRFIRSVTDRNAEECSTAEDIADMFNSQTRKMDI 1356
>gi|256074244|ref|XP_002573436.1| DNA ligase I [Schistosoma mansoni]
gi|350645178|emb|CCD60120.1| DNA ligase I, putative [Schistosoma mansoni]
Length = 783
Score = 41.2 bits (95), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 8/84 (9%)
Query: 23 KGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKI 74
K + ++ SL P + VWE+ A+ S + H A GIS+RFPR +I
Sbjct: 681 KAKPYYQYTISLIPDQWFEPVQVWEVKAADLSISPGHKAAAGLADPQKGISLRFPRFVRI 740
Query: 75 RDDKDWKTATNLPELKVLFKKSKE 98
RDDK + AT ++ L++ ++
Sbjct: 741 RDDKKPEDATTAQQVYELYQNQEQ 764
>gi|74195197|dbj|BAE28333.1| unnamed protein product [Mus musculus]
Length = 911
Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 21 HKKGNEFKYFSRSLKP--VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDK 78
HKK + KP +E + + +I AE ++++ G ++RFPR+ KIRDDK
Sbjct: 530 HKKSPPSSILCGTEKPEVYIEPQNSVIVQIKAAEIVPSDMYKT-GSTLRFPRIEKIRDDK 588
Query: 79 DWKTATNLPELKVLFKKS 96
+W L +L+ L K+
Sbjct: 589 EWHECMTLGDLEQLRGKA 606
Score = 38.1 bits (87), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 3 KNERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
K + Y E K DGER+Q+HK G ++YFSR+
Sbjct: 264 KQQSFYIETKLDGERMQMHKDGALYRYFSRN 294
>gi|26326007|dbj|BAC26747.1| unnamed protein product [Mus musculus]
Length = 911
Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 21 HKKGNEFKYFSRSLKP--VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDK 78
HKK + KP +E + + +I AE ++++ G ++RFPR+ KIRDDK
Sbjct: 530 HKKSPPSSILCGTEKPEVYIEPQNSVIVQIKAAEIVPSDMYKT-GSTLRFPRIEKIRDDK 588
Query: 79 DWKTATNLPELKVLFKKS 96
+W L +L+ L K+
Sbjct: 589 EWHECMTLGDLEQLRGKA 606
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 3 KNERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
K + Y E K DGER+Q+HK G ++YFSR+
Sbjct: 264 KQQSLYIETKLDGERMQMHKDGALYRYFSRN 294
>gi|392578982|gb|EIW72109.1| hypothetical protein TREMEDRAFT_25666 [Tremella mesenterica DSM
1558]
Length = 671
Score = 41.2 bits (95), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 7/58 (12%)
Query: 35 KPVLEHKAQPVWEISGAEFSQAEIHTAD-------GISIRFPRVTKIRDDKDWKTATN 85
KP + + + VWE+ A+ S + I+TA GIS+RFPR +IR+DK AT
Sbjct: 586 KPDVWFEPKIVWEVLTADLSLSPIYTAAHGLVDSRGISLRFPRFIRIREDKSSDEATT 643
>gi|405122241|gb|AFR97008.1| DNA ligase [Cryptococcus neoformans var. grubii H99]
Length = 801
Score = 41.2 bits (95), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 7/68 (10%)
Query: 35 KPVLEHKAQPVWEISGAEFSQAEIHTAD-------GISIRFPRVTKIRDDKDWKTATNLP 87
KP + + + VWE+ A+ S + I+ A GIS+RFPR +IRDDK AT
Sbjct: 716 KPDVWFEPRVVWEVLTADLSLSPIYAAAHGVIDSRGISLRFPRFIRIRDDKSADEATTAE 775
Query: 88 ELKVLFKK 95
++ +++
Sbjct: 776 QVSEFYQR 783
>gi|84794637|ref|NP_795927.2| DNA ligase 4 [Mus musculus]
gi|408360059|sp|Q8BTF7.2|DNLI4_MOUSE RecName: Full=DNA ligase 4; AltName: Full=DNA ligase IV; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 4
gi|146327388|gb|AAI41418.1| Ligase IV, DNA, ATP-dependent [synthetic construct]
gi|148690091|gb|EDL22038.1| ligase IV, DNA, ATP-dependent, isoform CRA_a [Mus musculus]
gi|148690093|gb|EDL22040.1| ligase IV, DNA, ATP-dependent, isoform CRA_a [Mus musculus]
Length = 911
Score = 41.2 bits (95), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 21 HKKGNEFKYFSRSLKP--VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDK 78
HKK + KP +E + + +I AE ++++ G ++RFPR+ KIRDDK
Sbjct: 530 HKKSPPSSILCGTEKPEVYIEPQNSVIVQIKAAEIVPSDMYKT-GSTLRFPRIEKIRDDK 588
Query: 79 DWKTATNLPELKVLFKKS 96
+W L +L+ L K+
Sbjct: 589 EWHECMTLGDLEQLRGKA 606
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 3 KNERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
K + Y E K DGER+Q+HK G ++YFSR+
Sbjct: 264 KQQSFYIETKLDGERMQMHKDGALYRYFSRN 294
>gi|402594172|gb|EJW88098.1| ATP dependent DNA ligase [Wuchereria bancrofti]
Length = 857
Score = 41.2 bits (95), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 50/124 (40%), Gaps = 29/124 (23%)
Query: 8 YSEIKYDGERVQVHKKGN-EFKYFSR-------SLKPVLEHKAQP--------------- 44
Y E+KYDGE +H+ N E +Y+SR ++ PVL+H+ P
Sbjct: 261 YVELKYDGEHFLLHRGTNCEMRYYSRVQNDFTNTISPVLDHRINPYFSPSLESCILDTEL 320
Query: 45 -VWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKSKETSDFT 103
+W+I +F +DG R V +R D ++ +LF K D
Sbjct: 321 LLWDIIDKKFIGHNTQASDG---RIYDVKALR--SDGAVEPSVAVFDILFLNGKSLMDVP 375
Query: 104 LKPK 107
L +
Sbjct: 376 LSER 379
>gi|33622310|ref|NP_891957.1| DNA ligase [Cryptophlebia leucotreta granulovirus]
gi|33569419|gb|AAQ21705.1| DNA ligase [Cryptophlebia leucotreta granulovirus]
Length = 576
Score = 41.2 bits (95), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 15/61 (24%)
Query: 42 AQPVWEISGAEFSQAEIHTADG----------ISIRFPRVTKIRDDKDWKTATNLPELKV 91
PVWE+ G +F IH+ + +SIR PR K+RDDK +K AT + +L++
Sbjct: 493 CMPVWEMEG-DF----IHSDNAWIWNNVSHNYVSIRLPRFIKVRDDKTYKEATTIFDLQL 547
Query: 92 L 92
L
Sbjct: 548 L 548
>gi|351702718|gb|EHB05637.1| DNA ligase 4 [Heterocephalus glaber]
Length = 911
Score = 41.2 bits (95), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 38 LEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
+E + + +I AE +E++ ++RFPR+ KIRDDK+W L EL+ L K+
Sbjct: 549 IEPRNSVIVQIKAAEIVPSEMYKT-SCTLRFPRIEKIRDDKEWHECMTLDELEQLRGKA 606
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 3 KNERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
K++ Y E K DGER+Q+HK G+ ++YFSR+
Sbjct: 264 KHQSFYIETKLDGERMQMHKDGDVYQYFSRN 294
>gi|224079383|ref|XP_002305845.1| predicted protein [Populus trichocarpa]
gi|222848809|gb|EEE86356.1| predicted protein [Populus trichocarpa]
Length = 227
Score = 41.2 bits (95), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 12/99 (12%)
Query: 13 YDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GI 64
+ G+R+ K Y+ P + + VWEI GA+F+ + +H A GI
Sbjct: 130 FSGDRILAKKP----PYYRTVEAPDMWFSPEVVWEIRGADFTISPVHQAAVGLVHQSRGI 185
Query: 65 SIRFPRVTKIRDDKDWKTATNLPELKVLFKKSKETSDFT 103
SIRFPR D++ + + ++ +F D T
Sbjct: 186 SIRFPRFIHSISDRNPEECSTAADIAEMFNSQTRKMDVT 224
>gi|356567248|ref|XP_003551833.1| PREDICTED: uncharacterized protein LOC100807673 [Glycine max]
Length = 1402
Score = 41.2 bits (95), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 46/106 (43%), Gaps = 14/106 (13%)
Query: 8 YSEIK--YDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--- 62
Y E+K + G++V K Y+ P + Q VWEI GA+F+ + +H A
Sbjct: 1298 YIEMKQFFSGDKVLSKKP----PYYQTREAPDMWFCPQVVWEIRGADFTVSPVHHAAIGL 1353
Query: 63 -----GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKSKETSDFT 103
GISIRFPR D+ + + ++ +F D T
Sbjct: 1354 VHPSRGISIRFPRFISCVSDRSPEECSTAADIGEMFHSQTRKMDIT 1399
>gi|449496284|ref|XP_004160093.1| PREDICTED: LOW QUALITY PROTEIN: DNA ligase 1-like [Cucumis sativus]
Length = 801
Score = 41.2 bits (95), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 42/76 (55%), Gaps = 8/76 (10%)
Query: 30 FSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWK 81
+ ++ P + + VWE+ A+ + + +H A GIS+RFPR+ ++R+DK+ +
Sbjct: 713 YGDTINPDVWFEPTEVWEVKAADLTISPVHRAGVGIVDSDKGISLRFPRLVRVREDKNPE 772
Query: 82 TATNLPELKVLFKKSK 97
A++ ++ ++ K
Sbjct: 773 EASSSEQVADMYNAQK 788
>gi|70606581|ref|YP_255451.1| ATP-dependent DNA ligase [Sulfolobus acidocaldarius DSM 639]
gi|449066802|ref|YP_007433884.1| ATP-dependent DNA ligase [Sulfolobus acidocaldarius N8]
gi|449069075|ref|YP_007436156.1| ATP-dependent DNA ligase [Sulfolobus acidocaldarius Ron12/I]
gi|76364175|sp|Q4JAM1.1|DNLI_SULAC RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|68567229|gb|AAY80158.1| thermostable DNA ligase [Sulfolobus acidocaldarius DSM 639]
gi|449035310|gb|AGE70736.1| ATP-dependent DNA ligase [Sulfolobus acidocaldarius N8]
gi|449037583|gb|AGE73008.1| ATP-dependent DNA ligase [Sulfolobus acidocaldarius Ron12/I]
Length = 598
Score = 41.2 bits (95), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 52/108 (48%), Gaps = 20/108 (18%)
Query: 14 DGERVQVHKKGNEFKYFSRSLKPVLEHKAQP-VW-------EISGAEFSQAEIHTA---- 61
D E +V K +E K + P +E + QP +W EI GAE + + +HT
Sbjct: 491 DAELEEVQKMLSEAKLDKKD--PRVESEIQPDIWVKPKYVAEIIGAEITLSPLHTCCKGV 548
Query: 62 ----DGISIRFPRVTKIRDDKDWKTATNLPELKVLFKK--SKETSDFT 103
G+SIRFPR + RDDK + AT E+ +++ K+ D T
Sbjct: 549 VSEEAGLSIRFPRFIRWRDDKSVEEATTPNEILEMYQSRLKKKVEDIT 596
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 19/26 (73%)
Query: 12 KYDGERVQVHKKGNEFKYFSRSLKPV 37
KYDGER Q+HKKG + FSR L+ +
Sbjct: 260 KYDGERAQIHKKGEKVYIFSRRLENI 285
>gi|156847073|ref|XP_001646422.1| hypothetical protein Kpol_2001p71 [Vanderwaltozyma polyspora DSM
70294]
gi|156117098|gb|EDO18564.1| hypothetical protein Kpol_2001p71 [Vanderwaltozyma polyspora DSM
70294]
Length = 726
Score = 41.2 bits (95), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 9/76 (11%)
Query: 16 ERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD------GISIRFP 69
E ++V K F F S +P + + + ++E+ A+ S + I+ A GIS+RFP
Sbjct: 638 EEIEVPKS---FYNFDSSAEPDIWFEPKVLFEVLTADLSLSPIYKAGSATYDKGISLRFP 694
Query: 70 RVTKIRDDKDWKTATN 85
R +IRDDK + AT+
Sbjct: 695 RFLRIRDDKSVEDATS 710
>gi|449456160|ref|XP_004145818.1| PREDICTED: DNA ligase 1-like [Cucumis sativus]
Length = 801
Score = 41.2 bits (95), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 42/76 (55%), Gaps = 8/76 (10%)
Query: 30 FSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWK 81
+ ++ P + + VWE+ A+ + + +H A GIS+RFPR+ ++R+DK+ +
Sbjct: 713 YGDTINPDVWFEPTEVWEVKAADLTISPVHRAGVGIVDSDKGISLRFPRLVRVREDKNPE 772
Query: 82 TATNLPELKVLFKKSK 97
A++ ++ ++ K
Sbjct: 773 EASSSEQVADMYNAQK 788
>gi|406993941|gb|EKE13018.1| hypothetical protein ACD_13C00106G0011 [uncultured bacterium]
Length = 563
Score = 41.2 bits (95), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTADGISIR 67
+ E+K ++QV +K E+ ++ L P V E++ E + + HTA G+++R
Sbjct: 477 FRELKARLTKIQVKEKPKEY-IVNKDLYPDFWVTPSVVIELAADEITVSPKHTA-GLALR 534
Query: 68 FPRVTKIRDDKDWKTATNLPELKVLFK 94
FPR+ + RDD+ T + EL L K
Sbjct: 535 FPRLIRFRDDRSVIDVTTVNELHDLLK 561
>gi|302841420|ref|XP_002952255.1| hypothetical protein VOLCADRAFT_92808 [Volvox carteri f.
nagariensis]
gi|300262520|gb|EFJ46726.1| hypothetical protein VOLCADRAFT_92808 [Volvox carteri f.
nagariensis]
Length = 1534
Score = 41.2 bits (95), Expect = 0.086, Method: Composition-based stats.
Identities = 18/35 (51%), Positives = 24/35 (68%)
Query: 61 ADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKK 95
A G + RFPR+T+IRDDK + AT L EL+ +K
Sbjct: 736 AAGYTTRFPRITRIRDDKSPRQATTLRELQDFVRK 770
>gi|167521445|ref|XP_001745061.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776675|gb|EDQ90294.1| predicted protein [Monosiga brevicollis MX1]
Length = 657
Score = 41.2 bits (95), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 8/72 (11%)
Query: 30 FSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWK 81
+ LKP + + VWE+ A+ S + H A GIS+RFPR +IR+DK
Sbjct: 569 YDAGLKPDVWFAPEQVWEVKAADLSISPRHLAAAGLVDPNKGISLRFPRFLRIREDKKAD 628
Query: 82 TATNLPELKVLF 93
AT+ ++ ++
Sbjct: 629 DATSAEQVADMY 640
>gi|327261085|ref|XP_003215362.1| PREDICTED: DNA ligase 4-like [Anolis carolinensis]
Length = 911
Score = 41.2 bits (95), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 23/30 (76%)
Query: 4 NERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
N+ Y E K DGER+Q+HK G+ +KYFSR+
Sbjct: 270 NQSFYIETKLDGERMQMHKDGDVYKYFSRN 299
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 45 VWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
+ +I AE ++++ + ++RFPR+ KIR+DK+W L L+ L K+
Sbjct: 561 IVQIKAAEIVNSDMYKTE-CTLRFPRIEKIREDKEWHECMTLDLLEQLRGKA 611
>gi|145482377|ref|XP_001427211.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124394291|emb|CAK59813.1| unnamed protein product [Paramecium tetraurelia]
Length = 568
Score = 41.2 bits (95), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 20/29 (68%)
Query: 7 CYSEIKYDGERVQVHKKGNEFKYFSRSLK 35
CY E KYDGER+QVH E K F RSL+
Sbjct: 245 CYFEYKYDGERLQVHYTNGEVKLFGRSLE 273
>gi|73669153|ref|YP_305168.1| DNA ligase (ATP) [Methanosarcina barkeri str. Fusaro]
gi|121725644|sp|Q46C04.1|DNLI1_METBF RecName: Full=DNA ligase 1; AltName: Full=Polydeoxyribonucleotide
synthase [ATP] 1
gi|72396315|gb|AAZ70588.1| DNA ligase (ATP) [Methanosarcina barkeri str. Fusaro]
Length = 549
Score = 41.2 bits (95), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 22/29 (75%)
Query: 9 SEIKYDGERVQVHKKGNEFKYFSRSLKPV 37
+E KYDGERVQ+HK G E K FSR L+ +
Sbjct: 211 AEEKYDGERVQIHKNGEEIKAFSRRLEDI 239
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 6/54 (11%)
Query: 45 VWEISGAEFSQAEIHTAD------GISIRFPRVTKIRDDKDWKTATNLPELKVL 92
V E+ G+E +++ HTA G+++RFPR +IR DK T L E++ L
Sbjct: 490 VIEVLGSEITESPSHTAGQGEGDTGLALRFPRFLRIRHDKGPYDITTLTEVRNL 543
>gi|440803704|gb|ELR24587.1| ligase I, DNA, ATPdependent, putative [Acanthamoeba castellanii
str. Neff]
Length = 753
Score = 41.2 bits (95), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 8/74 (10%)
Query: 30 FSRSLKPVLEHKAQPVWEISGAEFSQAE--------IHTADGISIRFPRVTKIRDDKDWK 81
+S ++P + A VWE+ A+ S + + + GIS+RFPR + RDDK +
Sbjct: 664 YSDQVEPDVWFDASVVWEVKAADLSLSPHYKAALGLVSESKGISLRFPRYLRTRDDKKPE 723
Query: 82 TATNLPELKVLFKK 95
ATN ++ ++++
Sbjct: 724 DATNGEQIAEMYQQ 737
>gi|149028347|gb|EDL83753.1| ligase I, DNA, ATP-dependent, isoform CRA_a [Rattus norvegicus]
gi|149028348|gb|EDL83754.1| ligase I, DNA, ATP-dependent, isoform CRA_a [Rattus norvegicus]
Length = 928
Score = 41.2 bits (95), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 8/59 (13%)
Query: 45 VWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDWKTATNLPELKVLFKK 95
VWE+ A+ S + I+ A GIS+RFPR ++R+DK + AT ++ L++K
Sbjct: 851 VWEVKCADLSLSPIYPAARGLVDKEKGISLRFPRFIRVREDKQPEQATTSDQVASLYRK 909
>gi|66730439|ref|NP_001019439.1| DNA ligase 1 [Rattus norvegicus]
gi|62471446|gb|AAH93604.1| Ligase I, DNA, ATP-dependent [Rattus norvegicus]
Length = 913
Score = 41.2 bits (95), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 8/59 (13%)
Query: 45 VWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDWKTATNLPELKVLFKK 95
VWE+ A+ S + I+ A GIS+RFPR ++R+DK + AT ++ L++K
Sbjct: 836 VWEVKCADLSLSPIYPAARGLVDKEKGISLRFPRFIRVREDKQPEQATTSDQVASLYRK 894
>gi|302348983|ref|YP_003816621.1| ATP-dependent DNA ligase [Acidilobus saccharovorans 345-15]
gi|302329395|gb|ADL19590.1| ATP-dependent DNA ligase [Acidilobus saccharovorans 345-15]
Length = 607
Score = 41.2 bits (95), Expect = 0.091, Method: Composition-based stats.
Identities = 17/32 (53%), Positives = 23/32 (71%)
Query: 6 RCYSEIKYDGERVQVHKKGNEFKYFSRSLKPV 37
+ Y E KYDGER Q+HK G++ K FSR L+ +
Sbjct: 260 KAYVEYKYDGERGQIHKDGDKIKIFSRRLEDI 291
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 8/59 (13%)
Query: 45 VWEISGAEFSQAEIHT--------ADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKK 95
V E+ GAE + + HT GISIRFPR + RDDK + AT EL ++K+
Sbjct: 534 VAEVIGAELTLSPAHTCCMDAVRKGAGISIRFPRFIRWRDDKGPEDATTEQELLEMYKR 592
>gi|124027312|ref|YP_001012632.1| ATP-dependent DNA ligase [Hyperthermus butylicus DSM 5456]
gi|224487885|sp|A2BJX6.1|DNLI_HYPBU RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|123978006|gb|ABM80287.1| ATP-dependent DNA ligase [Hyperthermus butylicus DSM 5456]
Length = 608
Score = 41.2 bits (95), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 8/70 (11%)
Query: 34 LKPVLEHKAQPVWEISGAEFSQAEIHT--------ADGISIRFPRVTKIRDDKDWKTATN 85
+KP + + V EI GAE + + IHT GISIRFPR + R DK + AT
Sbjct: 525 MKPDVWVEPTLVAEIIGAELTLSPIHTCCYGWVKSGAGISIRFPRFIRWRPDKGPEDATT 584
Query: 86 LPELKVLFKK 95
EL ++K+
Sbjct: 585 TKELYEMYKR 594
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 22/32 (68%)
Query: 6 RCYSEIKYDGERVQVHKKGNEFKYFSRSLKPV 37
R E KYDGER Q+HKKG++ FSR L+ +
Sbjct: 262 RALVEYKYDGERAQIHKKGDKIWIFSRRLENI 293
>gi|119872622|ref|YP_930629.1| ATP-dependent DNA ligase [Pyrobaculum islandicum DSM 4184]
gi|166215377|sp|A1RTK4.1|DNLI_PYRIL RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|119674030|gb|ABL88286.1| DNA ligase I, ATP-dependent Dnl1 [Pyrobaculum islandicum DSM 4184]
Length = 584
Score = 41.2 bits (95), Expect = 0.091, Method: Composition-based stats.
Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 9/101 (8%)
Query: 9 SEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHT-------- 60
+++K E +Q +K + ++P + Q V E+ GAE + + +HT
Sbjct: 481 ADLKKMYEMLQPYKIPHRHPRVVSKMEPDVWFTPQVVIEVIGAEITLSPLHTCCLGAVKP 540
Query: 61 ADGISIRFPRVT-KIRDDKDWKTATNLPELKVLFKKSKETS 100
G++IRFPR T + R DK + AT + E+ L+K+ K+ +
Sbjct: 541 GVGLAIRFPRFTGRYRTDKSPEQATTVSEMIELYKRQKKVA 581
>gi|403272943|ref|XP_003928292.1| PREDICTED: DNA ligase 4 isoform 1 [Saimiri boliviensis boliviensis]
gi|403272945|ref|XP_003928293.1| PREDICTED: DNA ligase 4 isoform 2 [Saimiri boliviensis boliviensis]
Length = 911
Score = 41.2 bits (95), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 21 HKKGNEFKYFSRSLKP--VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDK 78
HKK S KP +E + +I AE ++++ G ++RFPR+ KIRDDK
Sbjct: 530 HKKTPPSSILCGSEKPEVYIEPCNSVIVQIKAAEIVPSDMYKT-GCTLRFPRIEKIRDDK 588
Query: 79 DWKTATNLPELKVLFKKS 96
+W L +L+ L K+
Sbjct: 589 EWHECMTLDDLEQLRGKA 606
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 3 KNERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
+++ Y E K DGER+Q+HK G+ +KYFSR+
Sbjct: 264 RHQTFYIETKLDGERMQMHKDGDVYKYFSRN 294
>gi|119491701|ref|XP_001263345.1| DNA ligase I, putative [Neosartorya fischeri NRRL 181]
gi|119411505|gb|EAW21448.1| DNA ligase I, putative [Neosartorya fischeri NRRL 181]
Length = 833
Score = 41.2 bits (95), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 8/72 (11%)
Query: 35 KPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNL 86
+P + + Q VWE++ A+ + + +TA G+S+RFPR ++R+DK AT
Sbjct: 741 EPDVWFEPQEVWEMAFADITLSPTYTAAIGLVSDERGLSLRFPRFLRVREDKSIDEATTS 800
Query: 87 PELKVLFKKSKE 98
L +L++K E
Sbjct: 801 DYLALLWRKQAE 812
>gi|401396632|ref|XP_003879870.1| DNA ligase (Polydeoxyribonucleotide synthase [ATP])(Lig(Tk)), related
[Neospora caninum Liverpool]
gi|325114278|emb|CBZ49835.1| DNA ligase (Polydeoxyribonucleotide synthase [ATP])(Lig(Tk)), related
[Neospora caninum Liverpool]
Length = 1091
Score = 40.8 bits (94), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 8/57 (14%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNLPELKVLF 93
VWE A+ S + +HTA GI +RFPR ++R+DK+ + AT ++ ++
Sbjct: 1000 VWECRAADLSISPVHTAGIGEKSPDKGIGLRFPRFLRVREDKNPEQATTSSQIVEMY 1056
>gi|358338704|dbj|GAA28692.2| DNA ligase 1 [Clonorchis sinensis]
Length = 553
Score = 40.8 bits (94), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 12/79 (15%)
Query: 30 FSRSLKPVLEHKAQP--VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKD 79
F+ L P +H +P VWE+ A+ S + H A GIS+RFPR +IR+DK
Sbjct: 461 FAPGLVP--DHWFEPTQVWEVKAADLSISPAHKAAAGLADPEKGISLRFPRFLRIREDKK 518
Query: 80 WKTATNLPELKVLFKKSKE 98
+ AT ++ ++K ++
Sbjct: 519 PEDATTAQQVYEMYKSQEQ 537
>gi|348506808|ref|XP_003440949.1| PREDICTED: DNA ligase 4 [Oreochromis niloticus]
Length = 910
Score = 40.8 bits (94), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 22/30 (73%)
Query: 4 NERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
N Y E K DGER+Q+HK G+ +KYFSR+
Sbjct: 270 NSTFYIETKLDGERIQLHKDGDVYKYFSRN 299
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 45 VWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPEL 89
+ ++ AE ++++ + ++RFPR+ KIRDDK+W L EL
Sbjct: 561 IIQVKAAEIVGSDMYKTN-CTLRFPRIEKIRDDKEWHQCMTLAEL 604
>gi|332242096|ref|XP_003270220.1| PREDICTED: DNA ligase 4 isoform 5 [Nomascus leucogenys]
Length = 844
Score = 40.8 bits (94), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 21 HKKGNEFKYFSRSLKP--VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDK 78
HKK + KP +E + +I AE ++++ G ++RFPR+ KIRDDK
Sbjct: 463 HKKAPPSSILCGTEKPEVYIEPCNSVIVQIKAAEIVPSDMYKT-GCTLRFPRIEKIRDDK 521
Query: 79 DWKTATNLPELKVLFKKS 96
+W L +L+ L K+
Sbjct: 522 EWHECMTLDDLEQLRGKA 539
Score = 40.4 bits (93), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 3 KNERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
K++ Y E K DGER+Q+HK G+ +KYFSR+
Sbjct: 197 KHQSFYIETKLDGERMQMHKDGDVYKYFSRN 227
>gi|402217987|gb|EJT98065.1| ATP-dependent DNA ligase [Dacryopinax sp. DJM-731 SS1]
Length = 846
Score = 40.8 bits (94), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 36/58 (62%), Gaps = 7/58 (12%)
Query: 45 VWEISGAEFSQAEIHTAD-------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKK 95
VWE+ A+ S + ++TA GIS+RFPR ++RDDK + +T+ ++ ++++
Sbjct: 766 VWEVLAADLSLSPVYTAAQGLVEERGISLRFPRFIRVRDDKAPEDSTSPEQIADMYER 823
>gi|290977272|ref|XP_002671362.1| predicted protein [Naegleria gruberi]
gi|284084930|gb|EFC38618.1| predicted protein [Naegleria gruberi]
Length = 846
Score = 40.8 bits (94), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 8/72 (11%)
Query: 30 FSRSLKPVLEHKAQPVWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDWK 81
F S +P + A VWEI A+ + + H A GI++RFPR + R+DK +
Sbjct: 758 FRESQRPDVWFDANVVWEIKAADLTISPAHMAAIGLVDESKGIALRFPRFVRTREDKKPE 817
Query: 82 TATNLPELKVLF 93
AT+ ++ L+
Sbjct: 818 QATSAEQIADLY 829
>gi|320588869|gb|EFX01337.1| DNA ligase [Grosmannia clavigera kw1407]
Length = 905
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 43/82 (52%), Gaps = 8/82 (9%)
Query: 36 PVLEHKAQPVWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDWKTATNLP 87
P + + Q VWE++ A+ + + +TA G+S+RFPR + RDDK A+
Sbjct: 824 PDIWFEPQEVWEMAFADITLSPTYTAAIGLVSDERGLSLRFPRFLRQRDDKGIDEASTSD 883
Query: 88 ELKVLFKKSKETSDFTLKPKYD 109
L L++K ++ S+ K + D
Sbjct: 884 FLATLYRKQEKPSEEDPKEEED 905
>gi|307105557|gb|EFN53806.1| hypothetical protein CHLNCDRAFT_136511 [Chlorella variabilis]
Length = 1506
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 42/75 (56%), Gaps = 9/75 (12%)
Query: 29 YFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTA--------DGISIRFPR-VTKIRDDKD 79
Y++ +P + + + VWEI GA+ S + +H A G+ +RFPR + ++R DK
Sbjct: 1377 YYNTGEQPDMWFEPREVWEIRGADLSLSPVHKAAEGLVHAERGLGLRFPRFLGRVRQDKS 1436
Query: 80 WKTATNLPELKVLFK 94
+ AT+ ++ +++
Sbjct: 1437 PEDATSSQQIAEMYR 1451
>gi|355699355|gb|AES01100.1| ligase I, DNA, ATP-dependent [Mustela putorius furo]
Length = 919
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 8/65 (12%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
VWE+ A+ S + I+ A GIS+RFPR ++R+DK + AT ++ L++K
Sbjct: 842 VWEVKCADLSLSPIYPAARGLVDGEKGISLRFPRFIRVREDKKPEEATTSAQVASLYRKQ 901
Query: 97 KETSD 101
+ +
Sbjct: 902 SQIQN 906
>gi|406929835|gb|EKD65320.1| hypothetical protein ACD_50C00117G0002 [uncultured bacterium]
Length = 595
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 23/32 (71%)
Query: 4 NERCYSEIKYDGERVQVHKKGNEFKYFSRSLK 35
ER ++ KYDG RVQ+HK GN+ FSR+L+
Sbjct: 255 GERIHATPKYDGFRVQIHKDGNKVSMFSRNLE 286
>gi|392343903|ref|XP_003748816.1| PREDICTED: DNA ligase 1-like, partial [Rattus norvegicus]
Length = 831
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 8/59 (13%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKK 95
VWE+ A+ S + I+ A GIS+RFPR ++R+DK + AT ++ L++K
Sbjct: 754 VWEVKCADLSLSPIYPAARGLVDKEKGISLRFPRFIRVREDKQPEQATTSDQVASLYRK 812
>gi|332242088|ref|XP_003270216.1| PREDICTED: DNA ligase 4 isoform 1 [Nomascus leucogenys]
gi|332242090|ref|XP_003270217.1| PREDICTED: DNA ligase 4 isoform 2 [Nomascus leucogenys]
gi|332242092|ref|XP_003270218.1| PREDICTED: DNA ligase 4 isoform 3 [Nomascus leucogenys]
gi|332242094|ref|XP_003270219.1| PREDICTED: DNA ligase 4 isoform 4 [Nomascus leucogenys]
Length = 911
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 21 HKKGNEFKYFSRSLKP--VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDK 78
HKK + KP +E + +I AE ++++ G ++RFPR+ KIRDDK
Sbjct: 530 HKKAPPSSILCGTEKPEVYIEPCNSVIVQIKAAEIVPSDMYKT-GCTLRFPRIEKIRDDK 588
Query: 79 DWKTATNLPELKVLFKKS 96
+W L +L+ L K+
Sbjct: 589 EWHECMTLDDLEQLRGKA 606
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 3 KNERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
K++ Y E K DGER+Q+HK G+ +KYFSR+
Sbjct: 264 KHQSFYIETKLDGERMQMHKDGDVYKYFSRN 294
>gi|224043062|ref|XP_002198469.1| PREDICTED: DNA ligase 4 [Taeniopygia guttata]
Length = 911
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 23/30 (76%)
Query: 4 NERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
N+ Y E K DGER+Q+HK G+ +KYFSR+
Sbjct: 269 NQTFYIETKLDGERMQMHKDGDVYKYFSRN 298
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 45 VWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDW 80
+ +I AE ++++ D ++RFPR+ KIR+DK+W
Sbjct: 560 IVQIKAAEIVDSDMYKTD-CTLRFPRIEKIREDKEW 594
>gi|358372235|dbj|GAA88839.1| DNA ligase I [Aspergillus kawachii IFO 4308]
Length = 837
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 8/72 (11%)
Query: 35 KPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNL 86
+P + + Q VWE++ A+ + + +TA G+S+RFPR K+R+DK AT
Sbjct: 748 EPDVWFEPQEVWEMAFADITLSPTYTAALGLVSDERGLSLRFPRFLKVREDKSIDEATTS 807
Query: 87 PELKVLFKKSKE 98
L L++K E
Sbjct: 808 DYLAYLWRKQSE 819
>gi|197101141|ref|NP_001126522.1| DNA ligase 4 [Pongo abelii]
gi|75041273|sp|Q5R6L3.1|DNLI4_PONAB RecName: Full=DNA ligase 4; AltName: Full=DNA ligase IV; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 4
gi|55731786|emb|CAH92597.1| hypothetical protein [Pongo abelii]
Length = 911
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 21 HKKGNEFKYFSRSLKP--VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDK 78
HKK + KP +E + +I AE ++++ G ++RFPR+ KIRDDK
Sbjct: 530 HKKAPPSSILCGTEKPEVYIEPCNSVIVQIKAAEIVPSDMYKT-GCTLRFPRIEKIRDDK 588
Query: 79 DWKTATNLPELKVLFKKS 96
+W L +L+ L K+
Sbjct: 589 EWHECMTLDDLEQLRGKA 606
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 3 KNERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
K++ Y E K DGER+Q+HK G+ +KYFSR+
Sbjct: 264 KHQSFYIETKLDGERMQMHKDGDVYKYFSRN 294
>gi|410493561|ref|YP_006908759.1| putative ATP-dependent DNA ligase [Abalone herpesvirus
Victoria/AUS/2009]
gi|408776091|gb|AFU90119.1| putative ATP-dependent DNA ligase [Abalone herpesvirus
Victoria/AUS/2009]
Length = 629
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 19 QVHKKGNEFKYF-SRSLKPVLEHKAQPVWEISGAEFSQAEIHTA--------DGISIRFP 69
+V ++G + Y ++KP VWE+ A+ + + +H A +GIS+RFP
Sbjct: 513 EVRREGAQENYLVGSTMKPDQWFLPSYVWEVKVADLTVSPVHKAAIGLVSQTEGISLRFP 572
Query: 70 RVTKIRDDKDWKTATNLPELKVLF 93
R ++R+DK + AT ++ ++
Sbjct: 573 RFERVREDKKGEDATTSAQVAEMY 596
>gi|336244795|gb|AEI28315.1| ATP-dependent DNA ligase IV, partial [Crocodylus siamensis]
Length = 352
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 23/30 (76%)
Query: 4 NERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
N+ + E K DGER+Q+HK G+ +KYFSR+
Sbjct: 180 NQHFFIETKLDGERMQMHKDGDVYKYFSRN 209
>gi|328352626|emb|CCA39024.1| DNA ligase 1 [Komagataella pastoris CBS 7435]
Length = 1087
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 54/116 (46%), Gaps = 29/116 (25%)
Query: 7 CYSEIKYDGERVQVHKKGNEF-----KYFSRSLKPVLEHKAQP----------------V 45
CY+E GE K G F + S +LKP + + +P V
Sbjct: 970 CYNE--DSGEYETCCKIGTGFSEEMLQTLSGTLKPTVIQQPKPFYVYDASPDVWFEPTLV 1027
Query: 46 WEISGAEFSQAEIHTAD------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKK 95
+E+ A+ S + ++ A G+S+RFPR ++RDDK + AT+ ++ L++K
Sbjct: 1028 FEVLTADLSLSPVYKAGINFFGKGVSLRFPRFIRVRDDKSPEQATSSDQIVELYQK 1083
>gi|189200479|ref|XP_001936576.1| DNA ligase 1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187983675|gb|EDU49163.1| DNA ligase 1 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 796
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 8/82 (9%)
Query: 22 KKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTK 73
+K + Y + +P + + Q VWE++ A+ + + +TA G+S RFPR +
Sbjct: 695 RKPSYVSYNGGAGEPAVWFEPQEVWEVAFADLTLSPTYTAAMGLVSGERGLSTRFPRFLR 754
Query: 74 IRDDKDWKTATNLPELKVLFKK 95
+R DK + AT EL L+ K
Sbjct: 755 VRADKGVEEATEAGELAELYWK 776
>gi|145232901|ref|XP_001399823.1| DNA ligase 3 [Aspergillus niger CBS 513.88]
gi|134056744|emb|CAK44233.1| unnamed protein product [Aspergillus niger]
gi|350634660|gb|EHA23022.1| Hypothetical protein ASPNIDRAFT_52284 [Aspergillus niger ATCC 1015]
Length = 834
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 8/72 (11%)
Query: 35 KPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNL 86
+P + + Q VWE++ A+ + + +TA G+S+RFPR K+R+DK AT
Sbjct: 747 EPDVWFEPQEVWEMAFADITLSPTYTAALGLVSDERGLSLRFPRFLKVREDKSIDEATTS 806
Query: 87 PELKVLFKKSKE 98
L L++K E
Sbjct: 807 DYLAYLWRKQSE 818
>gi|449303996|gb|EMD00004.1| hypothetical protein BAUCODRAFT_63974 [Baudoinia compniacensis UAMH
10762]
Length = 882
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 14/100 (14%)
Query: 4 NERCYSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD- 62
N+ YSE DGE V + + +Y +P + + Q VWE++ A+ + + +TA
Sbjct: 760 NKEKYSE---DGEHGNVIARPSYVEYAG---EPDVWFEPQEVWEMAFADVTLSPTYTAAR 813
Query: 63 -------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKK 95
G+S+RFPR K+R+DK + A+ L L++K
Sbjct: 814 GLVSEERGLSLRFPRFLKVREDKGIEEASTNEFLAGLYRK 853
>gi|389860326|ref|YP_006362565.1| ATP-dependent DNA ligase [Thermogladius cellulolyticus 1633]
gi|388525229|gb|AFK50427.1| ATP-dependent DNA ligase [Thermogladius cellulolyticus 1633]
Length = 600
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 22/30 (73%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPV 37
+ E KYDGER Q+HKKG+E FSR L+ +
Sbjct: 255 FVEYKYDGERAQIHKKGDEVVIFSRRLENI 284
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 8/58 (13%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
V EI GAE + + +HT GISIRFPR + RDDK + AT EL ++K
Sbjct: 527 VAEIIGAELTLSPLHTCAVGKVRGDAGISIRFPRFIRWRDDKSPEDATTSNELFEMYK 584
>gi|432849667|ref|XP_004066615.1| PREDICTED: DNA ligase 4-like [Oryzias latipes]
Length = 912
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 22/30 (73%)
Query: 4 NERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
N Y E K DGER+Q+HK G+ +KYFSR+
Sbjct: 271 NSPFYIETKLDGERIQLHKDGDVYKYFSRN 300
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 45 VWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
+ ++ AE ++++ + ++RFPR+ KIRDDK+W L EL L K+
Sbjct: 562 IVQVKAAEIIPSDMYRTN-CTLRFPRIEKIRDDKEWHQCMTLAELDQLRSKA 612
>gi|860937|emb|CAA58467.1| DNA ligase IV [Homo sapiens]
Length = 844
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 45 VWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
+ +I AE ++++ G ++RFPR+ KIRDDK+W L +L+ L K+
Sbjct: 489 IVQIKAAEIVPSDMYKT-GCTLRFPRIEKIRDDKEWHECMTLDDLEQLRGKA 539
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 3 KNERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
K++ Y E K DGER+Q+HK G+ +KYFSR+
Sbjct: 197 KHQSFYIETKLDGERMQMHKDGDVYKYFSRN 227
>gi|336244801|gb|AEI28318.1| ATP-dependent DNA ligase IV, partial [Hemidactylus bowringii]
Length = 352
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/26 (61%), Positives = 21/26 (80%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRS 33
Y E K DGER+Q+HK G+ +KYFSR+
Sbjct: 184 YIETKLDGERIQMHKDGDVYKYFSRN 209
>gi|109121303|ref|XP_001084107.1| PREDICTED: DNA ligase 4-like [Macaca mulatta]
Length = 642
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 3 KNERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
K++ Y E K DGER+Q+HK G+ +KYFSR+
Sbjct: 264 KHQSFYIETKLDGERMQMHKDGDVYKYFSRN 294
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 21 HKKGNEFKYFSRSLKP--VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDK 78
HKK + KP +E + +I AE ++++ G ++RFPR+ KIR+DK
Sbjct: 530 HKKAPPSSILCGTEKPEVYIEPCNSVIVQIKAAEIVPSDMYKT-GCTLRFPRIEKIREDK 588
Query: 79 DWKTATNLPELKVLFKKS 96
+W L +L+ L K+
Sbjct: 589 EWHECMTLDDLEQLRGKA 606
>gi|431913220|gb|ELK14902.1| DNA ligase 4 [Pteropus alecto]
Length = 911
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 3 KNERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
KN+ Y E K DGER+Q+HK G+ ++YFSR+
Sbjct: 264 KNQSFYIETKLDGERMQMHKDGDIYEYFSRN 294
Score = 38.1 bits (87), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 45 VWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
+ +I E ++++ G ++RFPR+ KIR+DK+W+ L +L+ L K+
Sbjct: 556 IVQIKATEIVPSDMYKT-GCTLRFPRIEKIREDKEWRECMTLDDLEQLRGKA 606
>gi|426375944|ref|XP_004054774.1| PREDICTED: DNA ligase 4 isoform 4 [Gorilla gorilla gorilla]
Length = 844
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 45 VWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
+ +I AE ++++ G ++RFPR+ KIRDDK+W L +L+ L K+
Sbjct: 489 IVQIKAAEIVPSDMYKT-GCTLRFPRIEKIRDDKEWHECMTLDDLEQLRGKA 539
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 3 KNERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
K++ Y E K DGER+Q+HK G+ +KYFSR+
Sbjct: 197 KHQSFYIETKLDGERMQMHKDGDVYKYFSRN 227
>gi|158258270|dbj|BAF85108.1| unnamed protein product [Homo sapiens]
Length = 844
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 45 VWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
+ +I AE ++++ G ++RFPR+ KIRDDK+W L +L+ L K+
Sbjct: 489 IVQIKAAEIVPSDMYKT-GCTLRFPRIEKIRDDKEWHECMTLDDLEQLRGKA 539
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 3 KNERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
K++ Y E K DGER+Q+HK G+ +KYFSR+
Sbjct: 197 KHQSFYIETKLDGERMQMHKDGDVYKYFSRN 227
>gi|18653446|gb|AAL77435.1|AF479264_1 ligase IV, DNA, ATP-dependent [Homo sapiens]
Length = 844
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 45 VWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
+ +I AE ++++ G ++RFPR+ KIRDDK+W L +L+ L K+
Sbjct: 489 IVQIKAAEIVPSDMYKT-GCTLRFPRIEKIRDDKEWHECMTLDDLEQLRGKA 539
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 3 KNERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
K++ Y E K DGER+Q+HK G+ +KYFSR+
Sbjct: 197 KHQSFYIETKLDGERMQMHKDGDVYKYFSRN 227
>gi|426375938|ref|XP_004054771.1| PREDICTED: DNA ligase 4 isoform 1 [Gorilla gorilla gorilla]
gi|426375940|ref|XP_004054772.1| PREDICTED: DNA ligase 4 isoform 2 [Gorilla gorilla gorilla]
gi|426375942|ref|XP_004054773.1| PREDICTED: DNA ligase 4 isoform 3 [Gorilla gorilla gorilla]
Length = 911
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 45 VWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
+ +I AE ++++ G ++RFPR+ KIRDDK+W L +L+ L K+
Sbjct: 556 IVQIKAAEIVPSDMYKT-GCTLRFPRIEKIRDDKEWHECMTLDDLEQLRGKA 606
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 3 KNERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
K++ Y E K DGER+Q+HK G+ +KYFSR+
Sbjct: 264 KHQSFYIETKLDGERMQMHKDGDVYKYFSRN 294
>gi|354466703|ref|XP_003495812.1| PREDICTED: DNA ligase 4-like [Cricetulus griseus]
gi|344243977|gb|EGW00081.1| DNA ligase 4 [Cricetulus griseus]
Length = 912
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 45 VWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
+ +I AE ++++ G ++RFPR+ KIRDDK+W L +L+ L K+
Sbjct: 556 IVQIKAAEIVPSDMYKT-GTTLRFPRIEKIRDDKEWHECMTLGDLEELRGKA 606
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 3 KNERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
K + Y E K DGER+Q+HK G+ ++YFSR+
Sbjct: 264 KQQSFYIETKLDGERMQMHKDGSVYQYFSRN 294
>gi|332841620|ref|XP_003314255.1| PREDICTED: DNA ligase 4 [Pan troglodytes]
Length = 844
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 45 VWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
+ +I AE ++++ G ++RFPR+ KIRDDK+W L +L+ L K+
Sbjct: 489 IVQIKAAEIVPSDMYKT-GCTLRFPRIEKIRDDKEWHECMTLDDLEQLRGKA 539
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 3 KNERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
K++ Y E K DGER+Q+HK G+ +KYFSR+
Sbjct: 197 KHQSFYIETKLDGERMQMHKDGDVYKYFSRN 227
>gi|23199993|ref|NP_002303.2| DNA ligase 4 [Homo sapiens]
gi|46255052|ref|NP_996820.1| DNA ligase 4 [Homo sapiens]
gi|148539894|ref|NP_001091738.1| DNA ligase 4 [Homo sapiens]
gi|88911290|sp|P49917.2|DNLI4_HUMAN RecName: Full=DNA ligase 4; AltName: Full=DNA ligase IV; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 4
gi|22766796|gb|AAH37491.1| Ligase IV, DNA, ATP-dependent [Homo sapiens]
gi|119629499|gb|EAX09094.1| ligase IV, DNA, ATP-dependent, isoform CRA_a [Homo sapiens]
gi|119629500|gb|EAX09095.1| ligase IV, DNA, ATP-dependent, isoform CRA_a [Homo sapiens]
gi|119629501|gb|EAX09096.1| ligase IV, DNA, ATP-dependent, isoform CRA_a [Homo sapiens]
gi|123983318|gb|ABM83400.1| ligase IV, DNA, ATP-dependent [synthetic construct]
gi|123998021|gb|ABM86612.1| ligase IV, DNA, ATP-dependent [synthetic construct]
Length = 911
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 45 VWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
+ +I AE ++++ G ++RFPR+ KIRDDK+W L +L+ L K+
Sbjct: 556 IVQIKAAEIVPSDMYKT-GCTLRFPRIEKIRDDKEWHECMTLDDLEQLRGKA 606
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 3 KNERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
K++ Y E K DGER+Q+HK G+ +KYFSR+
Sbjct: 264 KHQSFYIETKLDGERMQMHKDGDVYKYFSRN 294
>gi|397524265|ref|XP_003832121.1| PREDICTED: DNA ligase 4 isoform 1 [Pan paniscus]
gi|397524267|ref|XP_003832122.1| PREDICTED: DNA ligase 4 isoform 2 [Pan paniscus]
gi|397524269|ref|XP_003832123.1| PREDICTED: DNA ligase 4 isoform 3 [Pan paniscus]
gi|397524271|ref|XP_003832124.1| PREDICTED: DNA ligase 4 isoform 4 [Pan paniscus]
Length = 911
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 45 VWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
+ +I AE ++++ G ++RFPR+ KIRDDK+W L +L+ L K+
Sbjct: 556 IVQIKAAEIVPSDMYKT-GCTLRFPRIEKIRDDKEWHECMTLDDLEQLRGKA 606
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 3 KNERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
K++ Y E K DGER+Q+HK G+ +K+FSR+
Sbjct: 264 KHQSFYIETKLDGERMQMHKDGDVYKFFSRN 294
>gi|393240351|gb|EJD47877.1| ATP-dependent DNA ligase [Auricularia delicata TFB-10046 SS5]
Length = 1038
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 23/32 (71%)
Query: 1 MAKNERCYSEIKYDGERVQVHKKGNEFKYFSR 32
+ K + E K DGER+QVHK+GNE+ Y+SR
Sbjct: 280 LMKGAKFIIEEKLDGERIQVHKRGNEYLYYSR 311
>gi|114650627|ref|XP_509726.2| PREDICTED: DNA ligase 4 isoform 2 [Pan troglodytes]
gi|114650629|ref|XP_001135359.1| PREDICTED: DNA ligase 4 isoform 1 [Pan troglodytes]
gi|332841618|ref|XP_003314254.1| PREDICTED: DNA ligase 4 [Pan troglodytes]
gi|410216076|gb|JAA05257.1| ligase IV, DNA, ATP-dependent [Pan troglodytes]
gi|410216078|gb|JAA05258.1| ligase IV, DNA, ATP-dependent [Pan troglodytes]
gi|410259034|gb|JAA17483.1| ligase IV, DNA, ATP-dependent [Pan troglodytes]
gi|410259036|gb|JAA17484.1| ligase IV, DNA, ATP-dependent [Pan troglodytes]
gi|410299716|gb|JAA28458.1| ligase IV, DNA, ATP-dependent [Pan troglodytes]
gi|410338935|gb|JAA38414.1| ligase IV, DNA, ATP-dependent [Pan troglodytes]
gi|410338937|gb|JAA38415.1| ligase IV, DNA, ATP-dependent [Pan troglodytes]
Length = 911
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 45 VWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
+ +I AE ++++ G ++RFPR+ KIRDDK+W L +L+ L K+
Sbjct: 556 IVQIKAAEIVPSDMYKT-GCTLRFPRIEKIRDDKEWHECMTLDDLEQLRGKA 606
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 3 KNERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
K++ Y E K DGER+Q+HK G+ +KYFSR+
Sbjct: 264 KHQSFYIETKLDGERMQMHKDGDVYKYFSRN 294
>gi|406997386|gb|EKE15470.1| hypothetical protein ACD_12C00007G0006 [uncultured bacterium]
Length = 586
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 45 VWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
V EI E +++ HTA G+++RFPR+ K RDDK+ + T L E++ +++
Sbjct: 534 VVEIKADEITKSPSHTA-GLALRFPRLEKFRDDKNPQEITTLKEVEKMYQ 582
>gi|189054575|dbj|BAG37361.1| unnamed protein product [Homo sapiens]
Length = 911
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 45 VWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
+ +I AE ++++ G ++RFPR+ KIRDDK+W L +L+ L K+
Sbjct: 556 IVQIKAAEIVPSDMYKT-GCALRFPRIEKIRDDKEWHECMTLDDLEQLRGKA 606
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 3 KNERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
K++ Y E K DGER+Q+HK G+ +KYFSR+
Sbjct: 264 KHQSFYIETKLDGERMQMHKDGDVYKYFSRN 294
>gi|397524273|ref|XP_003832125.1| PREDICTED: DNA ligase 4 isoform 5 [Pan paniscus]
Length = 844
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 45 VWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
+ +I AE ++++ G ++RFPR+ KIRDDK+W L +L+ L K+
Sbjct: 489 IVQIKAAEIVPSDMYKT-GCTLRFPRIEKIRDDKEWHECMTLDDLEQLRGKA 539
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 3 KNERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
K++ Y E K DGER+Q+HK G+ +K+FSR+
Sbjct: 197 KHQSFYIETKLDGERMQMHKDGDVYKFFSRN 227
>gi|167523437|ref|XP_001746055.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775326|gb|EDQ88950.1| predicted protein [Monosiga brevicollis MX1]
Length = 288
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 10/75 (13%)
Query: 31 SRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD----------GISIRFPRVTKIRDDKDW 80
+ S+ P + + VWEI GA+ + + +H A GIS+RFPR + R DK
Sbjct: 176 AESMTPSVWFEPVRVWEIRGADLTVSPVHRAGHGLVPGREAAGISLRFPRFIRERPDKTM 235
Query: 81 KTATNLPELKVLFKK 95
AT ++ L+++
Sbjct: 236 SEATTAHQIVELYQQ 250
>gi|71895189|ref|NP_001025987.1| DNA ligase 4 [Gallus gallus]
gi|88911289|sp|Q90YB1.2|DNLI4_CHICK RecName: Full=DNA ligase 4; AltName: Full=DNA ligase IV; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 4
gi|53130782|emb|CAG31720.1| hypothetical protein RCJMB04_10b2 [Gallus gallus]
Length = 912
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 23/30 (76%)
Query: 4 NERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
N+ Y E K DGER+Q+HK G+ +KYFSR+
Sbjct: 270 NQVFYIETKLDGERMQMHKDGDVYKYFSRN 299
Score = 36.6 bits (83), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 45 VWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVL 92
+ +I AE ++++ D ++RFPR+ KIR+DK+W L L+ L
Sbjct: 561 IVQIKAAEIVNSDMYKTD-CTLRFPRIEKIREDKEWYECMTLDMLEHL 607
>gi|15778121|dbj|BAB68506.1| DNA ligase IV [Gallus gallus]
Length = 912
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 23/30 (76%)
Query: 4 NERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
N+ Y E K DGER+Q+HK G+ +KYFSR+
Sbjct: 270 NQVFYIETKLDGERMQMHKDGDVYKYFSRN 299
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 45 VWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVL 92
+ +I AE ++++ D ++RFPR+ KIR+DK+W L L+ L
Sbjct: 561 IVQIKAAEIVNSDMYKTD-CTLRFPRIEKIREDKEWYECMTLDMLEHL 607
>gi|157824095|ref|NP_001099565.1| DNA ligase 4 [Rattus norvegicus]
gi|149057556|gb|EDM08799.1| rCG42995, isoform CRA_a [Rattus norvegicus]
gi|149057557|gb|EDM08800.1| rCG42995, isoform CRA_a [Rattus norvegicus]
Length = 911
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 38 LEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
+E + + +I AE ++++ G ++RFPR+ KIRDDK+W L +L+ L K+
Sbjct: 549 IEPQNSVIVQIKAAEIVPSDMYKT-GSTLRFPRIEKIRDDKEWHDCMTLDDLEQLRGKA 606
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 3 KNERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
K + Y E K DGER+Q+HK G ++YFSR+
Sbjct: 264 KQQSFYIETKLDGERMQMHKDGALYRYFSRN 294
>gi|326913894|ref|XP_003203267.1| PREDICTED: DNA ligase 4-like [Meleagris gallopavo]
Length = 912
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 23/30 (76%)
Query: 4 NERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
N+ Y E K DGER+Q+HK G+ +KYFSR+
Sbjct: 270 NQVFYIETKLDGERMQMHKDGDVYKYFSRN 299
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 45 VWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVL 92
+ +I AE ++++ D ++RFPR+ KIR+DK+W L L+ L
Sbjct: 561 IVQIKAAEIVDSDMYKTD-CTLRFPRIEKIREDKEWYECMTLDMLEHL 607
>gi|304313941|ref|YP_003849088.1| ATP-dependent DNA ligase [Methanothermobacter marburgensis str.
Marburg]
gi|302587400|gb|ADL57775.1| ATP-dependent DNA ligase [Methanothermobacter marburgensis str.
Marburg]
Length = 551
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 6 RCYSEIKYDGERVQVHKKGNEFKYFSRSLKPV 37
R + E KYDG RVQ+H+KG+E F+R L+ +
Sbjct: 242 RAFCETKYDGIRVQIHRKGDEISIFTRRLENI 273
>gi|402902442|ref|XP_003914111.1| PREDICTED: LOW QUALITY PROTEIN: DNA ligase 4 [Papio anubis]
Length = 910
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 3 KNERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
K++ Y E K DGER+Q+HK G+ +KYFSR+
Sbjct: 264 KHQSFYIETKLDGERMQMHKDGDVYKYFSRN 294
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 21 HKKGNEFKYFSRSLKP--VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDK 78
HKK + KP +E + +I AE ++++ G ++RFPR+ KIR+DK
Sbjct: 530 HKKAPPSSILCGTEKPEVYIEPCNSVIVQIKAAEIVPSDMYKT-GCTLRFPRIEKIREDK 588
Query: 79 DWKTATNLPELKVLFKKS 96
+W L +L+ L K+
Sbjct: 589 EWHECMTLDDLEQLRGKA 606
>gi|254572497|ref|XP_002493358.1| DNA ligase found in the nucleus and mitochondria [Komagataella
pastoris GS115]
gi|238033156|emb|CAY71179.1| DNA ligase found in the nucleus and mitochondria [Komagataella
pastoris GS115]
Length = 744
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 54/116 (46%), Gaps = 29/116 (25%)
Query: 7 CYSEIKYDGERVQVHKKGNEF-----KYFSRSLKPVLEHKAQP----------------V 45
CY+E GE K G F + S +LKP + + +P V
Sbjct: 627 CYNE--DSGEYETCCKIGTGFSEEMLQTLSGTLKPTVIQQPKPFYVYDASPDVWFEPTLV 684
Query: 46 WEISGAEFSQAEIHTAD------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKK 95
+E+ A+ S + ++ A G+S+RFPR ++RDDK + AT+ ++ L++K
Sbjct: 685 FEVLTADLSLSPVYKAGINFFGKGVSLRFPRFIRVRDDKSPEQATSSDQIVELYQK 740
>gi|322801939|gb|EFZ22486.1| hypothetical protein SINV_00170 [Solenopsis invicta]
Length = 759
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 12/84 (14%)
Query: 30 FSRSLKPVLEHKAQP--VWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKD 79
F S +P +H +P VWEI A+ S + +H A GIS+RFPR +IR+DK
Sbjct: 667 FDSSHEP--DHWFEPIQVWEIKCADLSLSPVHRAAIGIVDPEKGISLRFPRFIRIREDKT 724
Query: 80 WKTATNLPELKVLFKKSKETSDFT 103
+ A + ++ ++ ++ + T
Sbjct: 725 CEQANSAQDVADMYNNQEQIKNKT 748
>gi|355754801|gb|EHH58702.1| DNA ligase 4 [Macaca fascicularis]
Length = 911
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 3 KNERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
K++ Y E K DGER+Q+HK G+ +KYFSR+
Sbjct: 264 KHQSFYIETKLDGERMQMHKDGDVYKYFSRN 294
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 21 HKKGNEFKYFSRSLKP--VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDK 78
HKK + KP +E + +I AE ++++ G ++RFPR+ KIR+DK
Sbjct: 530 HKKAPPSSILCGTEKPEVYIEPCNSVIVQIKAAEIVPSDMYKT-GCTLRFPRIEKIREDK 588
Query: 79 DWKTATNLPELKVLFKKS 96
+W L +L+ L K+
Sbjct: 589 EWHECMTLDDLEQLRGKA 606
>gi|355701094|gb|EHH29115.1| DNA ligase 4 [Macaca mulatta]
gi|380789413|gb|AFE66582.1| DNA ligase 4 [Macaca mulatta]
gi|383410121|gb|AFH28274.1| DNA ligase 4 [Macaca mulatta]
Length = 911
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 3 KNERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
K++ Y E K DGER+Q+HK G+ +KYFSR+
Sbjct: 264 KHQSFYIETKLDGERMQMHKDGDVYKYFSRN 294
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 21 HKKGNEFKYFSRSLKP--VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDK 78
HKK + KP +E + +I AE ++++ G ++RFPR+ KIR+DK
Sbjct: 530 HKKAPPSSILCGTEKPEVYIEPCNSVIVQIKAAEIVPSDMYKT-GCTLRFPRIEKIREDK 588
Query: 79 DWKTATNLPELKVLFKKS 96
+W L +L+ L K+
Sbjct: 589 EWHECMTLDDLEQLRGKA 606
>gi|146094184|ref|XP_001467203.1| putative DNA ligase I [Leishmania infantum JPCM5]
gi|134071567|emb|CAM70256.1| putative DNA ligase I [Leishmania infantum JPCM5]
Length = 667
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 8/58 (13%)
Query: 45 VWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
VWE+ A+ S + +H A GI++RFPR + R+DK ATN ++ ++K
Sbjct: 595 VWEVKAADLSVSPVHQAAVGLVDPSKGIALRFPRYLRQREDKKPADATNAQQVADMYK 652
>gi|449277604|gb|EMC85707.1| DNA ligase 4 [Columba livia]
Length = 912
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 23/30 (76%)
Query: 4 NERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
N+ Y E K DGER+Q+HK G+ +KYFSR+
Sbjct: 270 NQIFYIETKLDGERMQLHKDGDVYKYFSRN 299
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 32/49 (65%), Gaps = 4/49 (8%)
Query: 45 VWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDW---KTATNLPELK 90
+ +I AE ++++ D ++RFPR+ KIR+DK+W T+T L +L+
Sbjct: 561 IVQIKAAEIVNSDMYKTD-CTLRFPRIEKIREDKEWYECMTSTMLEDLR 608
>gi|169770701|ref|XP_001819820.1| DNA ligase 3 [Aspergillus oryzae RIB40]
gi|83767679|dbj|BAE57818.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 827
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 8/74 (10%)
Query: 35 KPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNL 86
+P + + Q VWE++ A+ + + +TA G+S+RFPR ++R+DK AT
Sbjct: 735 EPDVWFEPQEVWEMAFADITLSPTYTAAIGLVSDERGLSLRFPRFLRVREDKSIDEATTS 794
Query: 87 PELKVLFKKSKETS 100
L +L++K E S
Sbjct: 795 DYLALLWRKQFERS 808
>gi|238486842|ref|XP_002374659.1| DNA ligase I, putative [Aspergillus flavus NRRL3357]
gi|220699538|gb|EED55877.1| DNA ligase I, putative [Aspergillus flavus NRRL3357]
gi|391867635|gb|EIT76881.1| ATP-dependent DNA ligase I [Aspergillus oryzae 3.042]
Length = 827
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 8/74 (10%)
Query: 35 KPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNL 86
+P + + Q VWE++ A+ + + +TA G+S+RFPR ++R+DK AT
Sbjct: 735 EPDVWFEPQEVWEMAFADITLSPTYTAAIGLVSDERGLSLRFPRFLRVREDKSIDEATTS 794
Query: 87 PELKVLFKKSKETS 100
L +L++K E S
Sbjct: 795 DYLALLWRKQFERS 808
>gi|337743285|gb|AEI73139.1| DNA ligase 4 [Kryptolebias marmoratus]
Length = 469
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/26 (61%), Positives = 21/26 (80%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRS 33
Y E K DGER+Q+HK G+ +KYFSR+
Sbjct: 171 YVETKLDGERIQLHKDGDVYKYFSRN 196
>gi|336244783|gb|AEI28309.1| ATP-dependent DNA ligase IV, partial [Struthio camelus]
Length = 352
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 22/30 (73%)
Query: 4 NERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
N Y E K DGER+Q+HK G+ +KYFSR+
Sbjct: 180 NHIFYIETKLDGERMQMHKDGDVYKYFSRN 209
>gi|398019792|ref|XP_003863060.1| DNA ligase I, putative [Leishmania donovani]
gi|322501291|emb|CBZ36370.1| DNA ligase I, putative [Leishmania donovani]
Length = 667
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 8/58 (13%)
Query: 45 VWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
VWE+ A+ S + +H A GI++RFPR + R+DK ATN ++ ++K
Sbjct: 595 VWEVKAADLSVSPVHQAAVGLVDPSKGIALRFPRYLRQREDKKPADATNAQQVADMYK 652
>gi|297190850|ref|ZP_06908248.1| ATP-dependent DNA ligase [Streptomyces pristinaespiralis ATCC
25486]
gi|297150641|gb|EFH30703.1| ATP-dependent DNA ligase [Streptomyces pristinaespiralis ATCC
25486]
Length = 511
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Query: 7 CYSEIKYDGERVQVHKKGNEFKYFSRSLKPV---LEHKAQPVWEISGAEF 53
C E K DG RVQVH++G++ + F+RSL + L AQ E++G F
Sbjct: 205 CVVEEKLDGIRVQVHREGSDVRIFTRSLDDITDRLPEVAQRTREMTGDRF 254
>gi|344284665|ref|XP_003414085.1| PREDICTED: DNA ligase 4-like [Loxodonta africana]
Length = 916
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 13/87 (14%)
Query: 22 KKGNEFKYFSRSLKP------------VLEHKAQPVWEISGAEFSQAEIHTADGISIRFP 69
K N +K F+R P +E + + +I AE ++++ D ++RFP
Sbjct: 524 KLANHWKPFNRKAPPSSILCGTEKPEVYIEPCSSVIVQIKAAEIVPSDMYKTD-CTLRFP 582
Query: 70 RVTKIRDDKDWKTATNLPELKVLFKKS 96
R+ KIR+DK+W L EL+ L K+
Sbjct: 583 RIEKIREDKEWHECMTLDELEQLRGKA 609
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 24/31 (77%)
Query: 3 KNERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
K++ Y E K DGER+Q+H+ G+ +K+FSR+
Sbjct: 267 KHQSFYIETKLDGERMQMHRDGDVYKFFSRN 297
>gi|326437875|gb|EGD83445.1| DNA ligase 1 [Salpingoeca sp. ATCC 50818]
Length = 1207
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 9/69 (13%)
Query: 25 NEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRD 76
N ++Y S +L P A VWE+ A+ S + H A GIS+RFPR ++RD
Sbjct: 1114 NYYRYDS-TLAPDHWFDAAQVWEVKAADLSISPRHKAAAGLVDAEKGISLRFPRFIRVRD 1172
Query: 77 DKDWKTATN 85
DK AT+
Sbjct: 1173 DKKPDMATS 1181
>gi|321262088|ref|XP_003195763.1| DNA ligase [Cryptococcus gattii WM276]
gi|317462237|gb|ADV23976.1| DNA ligase, putative [Cryptococcus gattii WM276]
Length = 803
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 7/58 (12%)
Query: 35 KPVLEHKAQPVWEISGAEFSQAEIHTAD-------GISIRFPRVTKIRDDKDWKTATN 85
KP + + + VWE+ A+ S + ++ A GIS+RFPR +IRDDK AT
Sbjct: 718 KPDVWFEPRVVWEVLTADLSLSPVYAAAHGVIDSRGISLRFPRFIRIRDDKSADEATT 775
>gi|348688552|gb|EGZ28366.1| hypothetical protein PHYSODRAFT_284249 [Phytophthora sojae]
Length = 968
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 45 VWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPEL 89
+ E+ G E S +++ G++IRFPR IR+DK+W NL +L
Sbjct: 578 ILEVYGFELSFTTLYST-GLTIRFPRCKAIRNDKEWYQCINLQDL 621
>gi|212527654|ref|XP_002143984.1| DNA ligase I, putative [Talaromyces marneffei ATCC 18224]
gi|210073382|gb|EEA27469.1| DNA ligase I, putative [Talaromyces marneffei ATCC 18224]
Length = 852
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 11/101 (10%)
Query: 29 YFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDW 80
Y + P + + Q VWEI+ A+ + + +TA G+S+RFPR ++R+DK
Sbjct: 748 YIDYAGHPDVWFEPQEVWEIAFADITLSPTYTAAIGLVGEERGLSLRFPRFLRVREDKSI 807
Query: 81 KTATNLPELKVLFKKSKETSDFTLKPKYDRIKNLKLQKARC 121
A+ L L++K E + L P D N++ Q R
Sbjct: 808 DEASTSDFLAALWRKQMERA-HELDPAVD--DNIEEQDERA 845
>gi|395862645|ref|XP_003803550.1| PREDICTED: DNA ligase 1 [Otolemur garnettii]
Length = 898
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
VWE+ + S + I+ A GIS+RFPR ++R+DK + AT ++ L++K
Sbjct: 821 VWEVKCGDLSLSPIYPAARGLVDSEKGISLRFPRFIRVREDKQPEAATTSTQVAYLYRKQ 880
Query: 97 KE 98
+
Sbjct: 881 SQ 882
>gi|84453228|dbj|BAE71211.1| putative DNA ligase [Trifolium pratense]
Length = 682
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 17 RVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRF 68
R +V K + + S P + +A VWE+ A+ + + ++ A GIS+RF
Sbjct: 581 RSKVIPKPKSYYQYGESTNPDVWFEASEVWEVKAADLTISPVYRAAVGKVDSNKGISLRF 640
Query: 69 PRVTKIRDDKDWKTATNLPELKVLFKKSK 97
PR+ ++R DK + A++ ++ ++ K
Sbjct: 641 PRLVRVRPDKAPEQASSSEQVAEMYTAQK 669
>gi|150399047|ref|YP_001322814.1| DNA ligase I, ATP-dependent Dnl1 [Methanococcus vannielii SB]
gi|224487892|sp|A6UNY0.1|DNLI_METVS RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|150011750|gb|ABR54202.1| DNA ligase I, ATP-dependent Dnl1 [Methanococcus vannielii SB]
Length = 573
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 24/47 (51%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQA 56
E KYDG RVQVHK E K +SR L+ + + V EI E
Sbjct: 250 ETKYDGARVQVHKSNGEVKIYSRRLEDITNSVPELVLEIKNLEVDNV 296
>gi|170038202|ref|XP_001846941.1| DNA ligase 4 [Culex quinquefasciatus]
gi|167881754|gb|EDS45137.1| DNA ligase 4 [Culex quinquefasciatus]
Length = 875
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 18/33 (54%), Positives = 22/33 (66%)
Query: 1 MAKNERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
M K + + E K DGER Q+HK G FKYFSR+
Sbjct: 210 MLKRDEYWLETKMDGERFQIHKDGVVFKYFSRN 242
>gi|170575516|ref|XP_001893273.1| ATP dependent DNA ligase C terminal region family protein [Brugia
malayi]
gi|158600811|gb|EDP37885.1| ATP dependent DNA ligase C terminal region family protein [Brugia
malayi]
Length = 858
Score = 40.4 bits (93), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 50/124 (40%), Gaps = 29/124 (23%)
Query: 8 YSEIKYDGERVQVHKKGN-EFKYFSR-------SLKPVLEHKAQP--------------- 44
Y E+KYDGE +H+ N E +Y+SR ++ PVL+H+ P
Sbjct: 262 YVELKYDGEHFLLHRGTNCEMRYYSRVQNDFTNTISPVLDHRINPYFSPSLESCILDTEL 321
Query: 45 -VWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKSKETSDFT 103
+W+I +F +DG R V +R D ++ +LF K D
Sbjct: 322 LLWDIIDKKFVGHNTLASDG---RIYDVKALR--SDGAVEPSVAVFDILFLNGKSLMDVP 376
Query: 104 LKPK 107
L +
Sbjct: 377 LSER 380
>gi|410493685|ref|YP_006908623.1| DNA ligase [Epinotia aporema granulovirus]
gi|354805119|gb|AER41541.1| DNA ligase [Epinotia aporema granulovirus]
Length = 534
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 10/79 (12%)
Query: 42 AQPVWEISGAEFSQAEIHT-----ADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
+ PVWE+ G T ++ +SIR PR ++R DK++++A L +LK+L +
Sbjct: 454 SMPVWEMEGDFIRNNRTWTYGEFKSNYVSIRLPRFIRVRHDKNFESANRLMDLKLLCDVT 513
Query: 97 K--ETSDFTLKPKYDRIKN 113
+ E +D+ L+ + IKN
Sbjct: 514 RYDELNDWYLR---NNIKN 529
>gi|170071033|ref|XP_001869792.1| DNA ligase 4 [Culex quinquefasciatus]
gi|167866990|gb|EDS30373.1| DNA ligase 4 [Culex quinquefasciatus]
Length = 805
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 18/33 (54%), Positives = 22/33 (66%)
Query: 1 MAKNERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
M K + + E K DGER Q+HK G FKYFSR+
Sbjct: 210 MLKRDEYWLETKMDGERFQIHKDGVVFKYFSRN 242
>gi|351702584|gb|EHB05503.1| DNA ligase 1 [Heterocephalus glaber]
Length = 874
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 8/65 (12%)
Query: 45 VWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
VWE+ A+ S + ++ A GIS+RFPR ++R+DK + AT ++ L++K
Sbjct: 797 VWEVKCADLSLSPVYPAARGLVDSEKGISLRFPRFIRVREDKKPEEATTSAQVACLYRKQ 856
Query: 97 KETSD 101
+ +
Sbjct: 857 SQIQN 861
>gi|295660840|ref|XP_002790976.1| DNA ligase [Paracoccidioides sp. 'lutzii' Pb01]
gi|226281228|gb|EEH36794.1| DNA ligase [Paracoccidioides sp. 'lutzii' Pb01]
Length = 850
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 8/72 (11%)
Query: 35 KPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNL 86
+P + + Q VWE++ A+ + + +TA G+S+RFPR ++R+DK + A++
Sbjct: 756 EPEVWFEPQEVWEVAFADITLSPTYTAAIGLVSDERGLSLRFPRFVRVREDKGLEEASSS 815
Query: 87 PELKVLFKKSKE 98
L L++K E
Sbjct: 816 DYLANLWRKQTE 827
>gi|390602448|gb|EIN11841.1| DNA ligase [Punctularia strigosozonata HHB-11173 SS5]
Length = 856
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Query: 25 NEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD-------GISIRFPRVTKIRDD 77
N ++ + LKP + K VWEI GA+ + + + A G S+RFPR KIR D
Sbjct: 742 NIWQVETGGLKPEVYFKPVEVWEIRGADVTLSPVSVAGIGMISSRGCSLRFPRFIKIRID 801
Query: 78 KDWKTATNLPELKVLFK 94
K + A+ L ++K
Sbjct: 802 KTTEEASTAEFLVQMYK 818
>gi|225681998|gb|EEH20282.1| DNA ligase [Paracoccidioides brasiliensis Pb03]
Length = 850
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 8/72 (11%)
Query: 35 KPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNL 86
+P + + Q VWE++ A+ + + +TA G+S+RFPR ++R+DK + A++
Sbjct: 756 EPEVWFEPQEVWEVAFADITLSPTYTAAIGLVSDERGLSLRFPRFVRVREDKGLEEASSS 815
Query: 87 PELKVLFKKSKE 98
L L++K E
Sbjct: 816 DYLANLWRKQTE 827
>gi|395332924|gb|EJF65302.1| ATP-dependent DNA ligase [Dichomitus squalens LYAD-421 SS1]
Length = 752
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 8/53 (15%)
Query: 34 LKPVLEHKAQPVWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDK 78
L+P + K Q VWEI GA+ + + + A G+S+RFPR +R+DK
Sbjct: 646 LRPEVYFKPQEVWEIRGADITISPVSVAALGLVSQTRGLSLRFPRFISLREDK 698
>gi|409080357|gb|EKM80717.1| hypothetical protein AGABI1DRAFT_71206 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 819
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 36 PVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNLP 87
P + + Q VWEI GA+ + + + A G+S+RFPR ++R+DK + A+
Sbjct: 718 PDVYFRPQEVWEIRGADITLSPVSVAAKGLGSLTRGLSLRFPRFLRVREDKTIEQASTPE 777
Query: 88 ELKVLFKKSK 97
L ++KK +
Sbjct: 778 FLASIWKKQQ 787
>gi|303316966|ref|XP_003068485.1| ATP-dependent DNA ligase, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240108166|gb|EER26340.1| ATP-dependent DNA ligase, putative [Coccidioides posadasii C735
delta SOWgp]
Length = 877
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 8/69 (11%)
Query: 35 KPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNL 86
+P + + Q VWEI+ A+ + + +TA G+S+RFPR ++R+DK + A+
Sbjct: 790 EPEVWFEPQEVWEIAFADITLSPTYTAAIGMASEERGLSLRFPRFLRVREDKTIEDASTS 849
Query: 87 PELKVLFKK 95
L L+KK
Sbjct: 850 STLAELWKK 858
>gi|328721431|ref|XP_001946729.2| PREDICTED: DNA ligase 4-like [Acyrthosiphon pisum]
Length = 889
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 24/34 (70%), Gaps = 2/34 (5%)
Query: 1 MAKNERCYSEIKYDGERVQVH--KKGNEFKYFSR 32
M KNE + +IK DGER Q+H K+ N FKYFSR
Sbjct: 260 MVKNEDLFVDIKLDGERFQLHWSKEKNIFKYFSR 293
>gi|157872853|ref|XP_001684953.1| putative DNA ligase I [Leishmania major strain Friedlin]
gi|68128023|emb|CAJ06835.1| putative DNA ligase I [Leishmania major strain Friedlin]
Length = 681
Score = 40.0 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 8/58 (13%)
Query: 45 VWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
VWE+ A+ S + +H A GI++RFPR + R+DK ATN ++ ++K
Sbjct: 609 VWEVKAADLSVSPVHQAAVGLVDPDKGIALRFPRYLRQREDKKPADATNARQVADMYK 666
>gi|336244787|gb|AEI28311.1| ATP-dependent DNA ligase IV, partial [Podocnemis unifilis]
Length = 352
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 16/26 (61%), Positives = 21/26 (80%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRS 33
Y E K DGER+Q+HK G+ +KYFSR+
Sbjct: 184 YIETKLDGERMQMHKDGDVYKYFSRN 209
>gi|119187513|ref|XP_001244363.1| hypothetical protein CIMG_03804 [Coccidioides immitis RS]
gi|392871089|gb|EAS32950.2| DNA ligase I, ATP-dependent (dnl1) [Coccidioides immitis RS]
Length = 831
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 8/69 (11%)
Query: 35 KPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNL 86
+P + + Q VWEI+ A+ + + +TA G+S+RFPR ++R+DK + A+
Sbjct: 744 EPEVWFEPQEVWEIAFADITLSPTYTAAIGMASEERGLSLRFPRFLRVREDKTIEEASTS 803
Query: 87 PELKVLFKK 95
L L+KK
Sbjct: 804 STLAELWKK 812
>gi|374630682|ref|ZP_09703067.1| DNA ligase [Methanoplanus limicola DSM 2279]
gi|373908795|gb|EHQ36899.1| DNA ligase [Methanoplanus limicola DSM 2279]
Length = 549
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 9 SEIKYDGERVQVHKKGNEFKYFSRSLKPV 37
+E KYDG R Q HK+G+EFK +SR L+ V
Sbjct: 243 AEFKYDGTRFQFHKRGDEFKIYSRKLEEV 271
>gi|320038364|gb|EFW20300.1| DNA ligase [Coccidioides posadasii str. Silveira]
Length = 831
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 8/69 (11%)
Query: 35 KPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNL 86
+P + + Q VWEI+ A+ + + +TA G+S+RFPR ++R+DK + A+
Sbjct: 744 EPEVWFEPQEVWEIAFADITLSPTYTAAIGMASEERGLSLRFPRFLRVREDKTIEDASTS 803
Query: 87 PELKVLFKK 95
L L+KK
Sbjct: 804 STLAELWKK 812
>gi|158299989|ref|XP_319999.3| AGAP009222-PA [Anopheles gambiae str. PEST]
gi|157013784|gb|EAA15024.3| AGAP009222-PA [Anopheles gambiae str. PEST]
Length = 752
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 20/84 (23%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
VWE+ A+ S + +H A GIS+RFPR ++R+DK AT+ +
Sbjct: 674 VWEVLCADLSLSPVHRAGIGIIDPEKGISLRFPRFIRVREDKGVTDATS----------A 723
Query: 97 KETSDFTLKPKYDRIKNLKLQKAR 120
++ S+ L D+IKN AR
Sbjct: 724 RQVSEMYL--NQDQIKNQTGSNAR 745
>gi|19112137|ref|NP_595345.1| DNA ligase (predicted) [Schizosaccharomyces pombe 972h-]
gi|74698092|sp|Q9C1W9.1|DNLI3_SCHPO RecName: Full=DNA ligase 3; AltName: Full=DNA ligase III; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 3
gi|12311750|emb|CAC22607.1| DNA ligase (predicted) [Schizosaccharomyces pombe]
Length = 774
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 8/74 (10%)
Query: 34 LKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATN 85
+ P + Q VWEI GA+ + + + A G+SIRFPR ++R DK + A+
Sbjct: 701 VTPQIYFAPQEVWEIKGAQITSSPAYKAALGLIQDDRGLSIRFPRFIRVRSDKGPEDAST 760
Query: 86 LPELKVLFKKSKET 99
L ++ K T
Sbjct: 761 NSILADMYMKQLNT 774
>gi|284998454|ref|YP_003420222.1| ATP-dependent DNA ligase I [Sulfolobus islandicus L.D.8.5]
gi|284446350|gb|ADB87852.1| DNA ligase I, ATP-dependent Dnl1 [Sulfolobus islandicus L.D.8.5]
Length = 601
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 10/64 (15%)
Query: 42 AQPVW--EISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDWKTATNLPELKV 91
+PV+ EI GAE + + +HT G+SIRFPR + RDDK + AT E+
Sbjct: 523 VEPVYVAEIIGAEITISPLHTCCQDVVEKDAGLSIRFPRFIRWRDDKSPEDATTTDEILE 582
Query: 92 LFKK 95
++ K
Sbjct: 583 MYNK 586
Score = 34.7 bits (78), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Query: 12 KYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEIS----GAEF-SQAEIHTAD 62
KYDGER Q+HKK ++ FSR L+ + V IS G EF + EI D
Sbjct: 260 KYDGERAQIHKKDDKIFIFSRRLENITSQYPDVVEYISKYTEGKEFIIEGEIVAVD 315
>gi|336244785|gb|AEI28310.1| ATP-dependent DNA ligase IV, partial [Pelophylax nigromaculatus]
Length = 352
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 16/26 (61%), Positives = 21/26 (80%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRS 33
Y E K DGER+Q+HK G+ +KYFSR+
Sbjct: 184 YIETKLDGERMQLHKDGDVYKYFSRN 209
>gi|227828207|ref|YP_002829987.1| ATP-dependent DNA ligase [Sulfolobus islandicus M.14.25]
gi|227830966|ref|YP_002832746.1| ATP-dependent DNA ligase [Sulfolobus islandicus L.S.2.15]
gi|229585436|ref|YP_002843938.1| ATP-dependent DNA ligase [Sulfolobus islandicus M.16.27]
gi|238620398|ref|YP_002915224.1| ATP-dependent DNA ligase [Sulfolobus islandicus M.16.4]
gi|259645311|sp|C3MZR1.1|DNLI_SULIA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|259645312|sp|C4KIZ2.1|DNLI_SULIK RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|259645313|sp|C3MJ14.1|DNLI_SULIL RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|259645314|sp|C3MYD2.1|DNLI_SULIM RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|227457414|gb|ACP36101.1| DNA ligase I, ATP-dependent Dnl1 [Sulfolobus islandicus L.S.2.15]
gi|227460003|gb|ACP38689.1| DNA ligase I, ATP-dependent Dnl1 [Sulfolobus islandicus M.14.25]
gi|228020486|gb|ACP55893.1| DNA ligase I, ATP-dependent Dnl1 [Sulfolobus islandicus M.16.27]
gi|238381468|gb|ACR42556.1| DNA ligase I, ATP-dependent Dnl1 [Sulfolobus islandicus M.16.4]
Length = 601
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 10/64 (15%)
Query: 42 AQPVW--EISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDWKTATNLPELKV 91
+PV+ EI GAE + + +HT G+SIRFPR + RDDK + AT E+
Sbjct: 523 VEPVYVAEIIGAEITISPLHTCCQDVVEKDAGLSIRFPRFIRWRDDKSPEDATTTDEILE 582
Query: 92 LFKK 95
++ K
Sbjct: 583 MYNK 586
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Query: 12 KYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEIS----GAEF-SQAEIHTAD 62
KYDGER Q+HKK ++ FSR L+ + V IS G EF + EI D
Sbjct: 260 KYDGERAQIHKKDDKIFIFSRRLENITSQYPDVVEYISKYTEGKEFIIEGEIVAVD 315
>gi|385773884|ref|YP_005646451.1| ATP-dependent DNA ligase I [Sulfolobus islandicus HVE10/4]
gi|385776526|ref|YP_005649094.1| ATP-dependent DNA ligase I [Sulfolobus islandicus REY15A]
gi|323475274|gb|ADX85880.1| DNA ligase I, ATP-dependent Dnl1 [Sulfolobus islandicus REY15A]
gi|323477999|gb|ADX83237.1| DNA ligase I, ATP-dependent Dnl1 [Sulfolobus islandicus HVE10/4]
Length = 601
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 10/64 (15%)
Query: 42 AQPVW--EISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDWKTATNLPELKV 91
+PV+ EI GAE + + +HT G+SIRFPR + RDDK + AT E+
Sbjct: 523 VEPVYVAEIIGAEITISPLHTCCQGVVEKDAGLSIRFPRFIRWRDDKSPEDATTTDEILE 582
Query: 92 LFKK 95
++ K
Sbjct: 583 MYNK 586
Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Query: 12 KYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEIS----GAEF-SQAEIHTAD 62
KYDGER Q+HKK ++ FSR L+ + V IS G EF + EI D
Sbjct: 260 KYDGERAQIHKKDDKIFIFSRRLENITSQYPDVVEYISKYTEGKEFIIEGEIVAVD 315
>gi|229579844|ref|YP_002838243.1| ATP-dependent DNA ligase [Sulfolobus islandicus Y.G.57.14]
gi|259645316|sp|C3N834.1|DNLI_SULIY RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|228010559|gb|ACP46321.1| DNA ligase I, ATP-dependent Dnl1 [Sulfolobus islandicus Y.G.57.14]
Length = 601
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 10/64 (15%)
Query: 42 AQPVW--EISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDWKTATNLPELKV 91
+PV+ EI GAE + + +HT G+SIRFPR + RDDK + AT E+
Sbjct: 523 VEPVYVAEIIGAEITISPLHTCCQDVVEKDAGLSIRFPRFIRWRDDKSPEDATTTDEILE 582
Query: 92 LFKK 95
++ K
Sbjct: 583 MYNK 586
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Query: 12 KYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEIS----GAEF-SQAEIHTAD 62
KYDGER Q+HKK ++ FSR L+ + V IS G EF + EI D
Sbjct: 260 KYDGERAQIHKKDDKIFIFSRRLENITSQYPDVVEYISKYTEGKEFIIEGEIVAVD 315
>gi|229581496|ref|YP_002839895.1| ATP-dependent DNA ligase [Sulfolobus islandicus Y.N.15.51]
gi|259645315|sp|C3NF77.1|DNLI_SULIN RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|228012212|gb|ACP47973.1| DNA ligase I, ATP-dependent Dnl1 [Sulfolobus islandicus Y.N.15.51]
Length = 601
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 10/64 (15%)
Query: 42 AQPVW--EISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDWKTATNLPELKV 91
+PV+ EI GAE + + +HT G+SIRFPR + RDDK + AT E+
Sbjct: 523 VEPVYVAEIIGAEITISPLHTCCQDVVEKDAGLSIRFPRFIRWRDDKSPEDATTTDEILE 582
Query: 92 LFKK 95
++ K
Sbjct: 583 MYNK 586
Score = 34.7 bits (78), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Query: 12 KYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEIS----GAEF-SQAEIHTAD 62
KYDGER Q+HKK ++ FSR L+ + V IS G EF + EI D
Sbjct: 260 KYDGERAQIHKKDDKIFIFSRRLENITSQYPDVVEYISKYTEGKEFIIEGEIVAVD 315
>gi|395833277|ref|XP_003789666.1| PREDICTED: DNA ligase 4 [Otolemur garnettii]
Length = 912
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 45 VWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
+ ++ AE ++++ G ++RFPR+ KIRDDK+W L +L+ L K+
Sbjct: 557 IVQVKAAEIVPSDMYKT-GCTLRFPRIEKIRDDKEWHECMTLDDLEQLRGKA 607
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 3 KNERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
K++ Y E K DGER+Q+HK G ++YFSR+
Sbjct: 265 KHQSFYIETKLDGERIQMHKDGTVYEYFSRN 295
>gi|242784288|ref|XP_002480357.1| DNA ligase I, putative [Talaromyces stipitatus ATCC 10500]
gi|218720504|gb|EED19923.1| DNA ligase I, putative [Talaromyces stipitatus ATCC 10500]
Length = 861
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 29 YFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDW 80
Y + P + + Q VWE++ A+ + + +TA G+S+RFPR ++R+DK
Sbjct: 753 YIDYAGHPDVWFEPQEVWEMAFADITLSPTYTAAIGLVSEERGLSLRFPRFLRVREDKSI 812
Query: 81 KTATNLPELKVLFKKSKETS---DFTLKPKYD 109
A+ L L++K E + + L P D
Sbjct: 813 DEASTSDYLASLYRKQVERAREEEVALDPSVD 844
>gi|336244781|gb|AEI28308.1| ATP-dependent DNA ligase IV, partial [Trachemys scripta]
Length = 353
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 16/26 (61%), Positives = 21/26 (80%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRS 33
Y E K DGER+Q+HK G+ +KYFSR+
Sbjct: 184 YIETKLDGERMQMHKDGDVYKYFSRN 209
>gi|14423679|sp|Q9P9K9.1|DNLI_SULSH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|7341364|gb|AAF61267.1|AF242877_1 DNA ligase [Sulfolobus shibatae]
Length = 601
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 10/63 (15%)
Query: 43 QPVW--EISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDWKTATNLPELKVL 92
+PV+ EI GAE + + +HT G+SIRFPR + RDDK + AT E+ +
Sbjct: 524 EPVYVAEIIGAEITISPLHTCCQDVVEKDAGLSIRFPRFIRWRDDKSPEDATTTDEILEM 583
Query: 93 FKK 95
+ K
Sbjct: 584 YNK 586
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Query: 12 KYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEIS----GAEF-SQAEIHTAD 62
KYDGER Q+HKK ++ FSR L+ + V IS G EF + EI D
Sbjct: 260 KYDGERAQIHKKSDKIFIFSRRLENITSQYPDVVEYISKYVEGKEFIIEGEIVAVD 315
>gi|426197258|gb|EKV47185.1| hypothetical protein AGABI2DRAFT_69760 [Agaricus bisporus var.
bisporus H97]
Length = 737
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Query: 36 PVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNLP 87
P + + Q VWEI GA+ + + + A G+S+RFPR ++R+DK + A+
Sbjct: 636 PDVYFRPQEVWEIRGADITLSPVSVAAKGLGSLTRGLSLRFPRFLRVREDKTIEQASTPE 695
Query: 88 ELKVLFKKSK 97
L ++KK +
Sbjct: 696 FLASIWKKQQ 705
>gi|395527303|ref|XP_003765789.1| PREDICTED: DNA ligase 4 [Sarcophilus harrisii]
Length = 911
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 45 VWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
+ +I AE ++++ D ++RFPR+ KIR+DK+W L EL+ L K+
Sbjct: 556 IVQIKAAEIVSSDMYKTD-CTLRFPRIEKIREDKEWYECMTLSELENLRGKA 606
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 3 KNERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
K++ Y E K DGER+Q+HK G+ +K+FSR+
Sbjct: 264 KHQSFYIETKLDGERMQMHKDGDVYKFFSRN 294
>gi|355570832|ref|ZP_09042102.1| DNA ligase [Methanolinea tarda NOBI-1]
gi|354826114|gb|EHF10330.1| DNA ligase [Methanolinea tarda NOBI-1]
Length = 566
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 1 MAKNERCYSEIKYDGERVQVHKKGNEFKYFSRSLKPVLE 39
+A+N +E KYDG R Q HK+GN + +SR L+ V E
Sbjct: 251 IAENGAMAAEYKYDGSRFQFHKQGNRCRMYSRKLEDVTE 289
>gi|146302935|ref|YP_001190251.1| ATP-dependent DNA ligase [Metallosphaera sedula DSM 5348]
gi|172046897|sp|A4YD25.1|DNLI_METS5 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|145701185|gb|ABP94327.1| DNA ligase I, ATP-dependent Dnl1 [Metallosphaera sedula DSM 5348]
Length = 598
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 5/56 (8%)
Query: 45 VWEISGAEFSQAEIHTA-----DGISIRFPRVTKIRDDKDWKTATNLPELKVLFKK 95
V E+ GAE + + +HT G+SIRFPR + RDDK + AT E+ ++ K
Sbjct: 529 VAEVIGAEITISPLHTCCRGEKGGLSIRFPRFIRWRDDKSPEDATTNQEIMEMYSK 584
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 24/37 (64%)
Query: 4 NERCYSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEH 40
N + + KYDGER Q+H+KG++ FSR ++ + +
Sbjct: 253 NGKALVDYKYDGERAQIHRKGDKVTIFSRRMENITDQ 289
>gi|13542068|ref|NP_111756.1| ATP-dependent DNA ligase [Thermoplasma volcanium GSS1]
gi|21263560|sp|Q979A1.1|DNLI_THEVO RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|14325499|dbj|BAB60403.1| DNA ligase [Thermoplasma volcanium GSS1]
Length = 588
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 9/64 (14%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVT-KIRDDKDWKTATNLPELKVLFKK 95
V EI GAE + + +HT G+SIRFPR T K RDDK + +T E+ ++K+
Sbjct: 519 VMEIIGAEITISPVHTCAFGIIEKDAGLSIRFPRFTGKWRDDKKPEDSTTTQEIIEMYKE 578
Query: 96 SKET 99
K+T
Sbjct: 579 QKKT 582
>gi|375102403|ref|ZP_09748666.1| ATP-dependent DNA ligase I [Saccharomonospora cyanea NA-134]
gi|374663135|gb|EHR63013.1| ATP-dependent DNA ligase I [Saccharomonospora cyanea NA-134]
Length = 513
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 24/34 (70%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQ 43
E K DG R+QVH++G+E ++R+L+ V H A+
Sbjct: 209 EYKLDGARIQVHRRGDEVHVYTRTLREVTAHVAE 242
>gi|403182787|gb|EJY57630.1| AAEL017365-PA, partial [Aedes aegypti]
Length = 925
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 23/33 (69%)
Query: 1 MAKNERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
M K + + E K DGER Q+HK+G +KYFSR+
Sbjct: 264 MLKKDEFWLETKMDGERFQIHKEGQVYKYFSRN 296
>gi|345784854|ref|XP_003432611.1| PREDICTED: DNA ligase 1 [Canis lupus familiaris]
Length = 914
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 8/65 (12%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
VWE+ A+ S + I+ A GIS+RFPR ++R+DK + AT ++ L+ K
Sbjct: 837 VWEVKCADLSLSPIYPAARGLVDGEKGISLRFPRFIRVREDKKPEEATTSGQVACLYMKQ 896
Query: 97 KETSD 101
+ +
Sbjct: 897 SQIQN 901
>gi|440494286|gb|ELQ76685.1| ATP-dependent DNA ligase I [Trachipleistophora hominis]
Length = 296
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 22/24 (91%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSRS 33
E+KYDGER+Q+HKK ++ K++SR+
Sbjct: 246 EVKYDGERIQIHKKNDQVKFYSRN 269
>gi|393906949|gb|EFO21610.2| DNA ligase [Loa loa]
Length = 665
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 8/85 (9%)
Query: 22 KKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTA--------DGISIRFPRVTK 73
+K + + SLKP + + VWE+ A+ S + H A GIS+RFPR +
Sbjct: 563 EKARPYYSYDSSLKPDVWFDPKIVWEVKAADLSISPKHFAARGIVDQEKGISLRFPRYIR 622
Query: 74 IRDDKDWKTATNLPELKVLFKKSKE 98
+R DK + AT ++ ++ ++
Sbjct: 623 MRTDKTPEEATTSQQIADMYNNQEQ 647
>gi|170086844|ref|XP_001874645.1| DNA ligase IV [Laccaria bicolor S238N-H82]
gi|164649845|gb|EDR14086.1| DNA ligase IV [Laccaria bicolor S238N-H82]
Length = 1059
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/25 (64%), Positives = 21/25 (84%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSR 32
+ E K DGER+Q+HK+GNE+ YFSR
Sbjct: 286 FIEEKLDGERMQLHKRGNEYLYFSR 310
>gi|410947682|ref|XP_003980572.1| PREDICTED: DNA ligase 4 [Felis catus]
Length = 911
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 21 HKKGNEFKYFSRSLKP--VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDK 78
HKK + KP +E + +I E +E++ G ++RFPR+ KIR+DK
Sbjct: 530 HKKAPPSSILCGTEKPEVYIEPCHSVIVQIKATEIVPSEMYKT-GCTLRFPRIEKIREDK 588
Query: 79 DWKTATNLPELKVLFKKS 96
+W T L +L+ L K+
Sbjct: 589 EWYECTTLDDLEQLRGKA 606
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 3 KNERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
K++ Y E K DGER+Q+HK G+ ++YFSR+
Sbjct: 264 KHQSFYIETKLDGERMQMHKDGDVYQYFSRN 294
>gi|322708068|gb|EFY99645.1| DNA ligase I, putative [Metarhizium anisopliae ARSEF 23]
Length = 871
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 9/96 (9%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD----- 62
Y + GER + F +S + P + + Q VWE++ A+ + + +TA
Sbjct: 752 YDNGEESGERKNTRSQMPSFIEYSGPM-PDVWFEPQEVWEMAFADITLSPTYTAAIGLVS 810
Query: 63 ---GISIRFPRVTKIRDDKDWKTATNLPELKVLFKK 95
G+S+RFPR K RDDK + A+ L L++K
Sbjct: 811 DERGLSLRFPRFLKKRDDKSLEEASTNEFLAGLWRK 846
>gi|452077113|gb|AGF93082.1| DNA ligase I, ATP-dependent Dnl1 [uncultured organism]
Length = 567
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 3/59 (5%)
Query: 41 KAQPVWEISGAEF--SQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKSK 97
K Q ++EI+ E S +E HT+ G +RFPR +IR+D D A + ++K LF+K +
Sbjct: 506 KPQEIFEINYEEIQKSPSETHTS-GYGLRFPRYVQIREDLDTTAADTVNDIKKLFEKQE 563
>gi|115396374|ref|XP_001213826.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114193395|gb|EAU35095.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 760
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 8/72 (11%)
Query: 35 KPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNL 86
+P + + Q VWE++ A+ + + + A G+S+RFPR ++RDDK A+
Sbjct: 668 EPDVWFEPQEVWEMAFADITLSPTYPAALGLVSDERGLSLRFPRFLRVRDDKSIDEASTA 727
Query: 87 PELKVLFKKSKE 98
L +L++K E
Sbjct: 728 DYLALLWRKQSE 739
>gi|448323407|ref|ZP_21512869.1| DNA ligase (ATP) [Natronococcus amylolyticus DSM 10524]
gi|445599899|gb|ELY53921.1| DNA ligase (ATP) [Natronococcus amylolyticus DSM 10524]
Length = 563
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 9 SEIKYDGERVQVHKKGNEFKYFSRSLKPVLEH 40
+E KYDG RVQ+HK G+E + F+R L+ + E
Sbjct: 253 AEYKYDGVRVQIHKDGDEVRAFTRRLEEITEQ 284
>gi|414880949|tpg|DAA58080.1| TPA: putative DNA ligase family protein [Zea mays]
Length = 104
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 12/99 (12%)
Query: 13 YDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GI 64
Y GER+ K Y+ +P L A+ +WEI GA+ + + +H A GI
Sbjct: 5 YSGERILPKKP----VYYKTDEQPELWFTAEQIWEIRGADLTLSPVHHAAIGLVHPSRGI 60
Query: 65 SIRFPRVTKIRDDKDWKTATNLPELKVLFKKSKETSDFT 103
S+R PR + D+ + ++ +FK D +
Sbjct: 61 SVRMPRYIRSVPDRSPEDCGTAADIASMFKAQTRKMDVS 99
>gi|344211456|ref|YP_004795776.1| DNA ligase [Haloarcula hispanica ATCC 33960]
gi|343782811|gb|AEM56788.1| DNA ligase [Haloarcula hispanica ATCC 33960]
Length = 554
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 55/122 (45%), Gaps = 12/122 (9%)
Query: 5 ERCYSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIH----- 59
+R E KYDG RVQVH G + + FSR+++ V + + V + + A +
Sbjct: 248 DRAAVEWKYDGARVQVHFDGEDARLFSRNMEEVTDPLPEVVDTVESTLDAPAILDGEVVA 307
Query: 60 -TADGISIRFPRV-TKIRDDKD-----WKTATNLPELKVLFKKSKETSDFTLKPKYDRIK 112
ADG + F V + R D A L L ++ D +LK ++DR++
Sbjct: 308 VDADGDPLPFQEVLRRFRRKHDVAAAREDVAVRLHAFDCLHADGEDLLDASLKTRHDRLE 367
Query: 113 NL 114
+L
Sbjct: 368 SL 369
>gi|289191596|ref|YP_003457537.1| DNA ligase I, ATP-dependent Dnl1 [Methanocaldococcus sp. FS406-22]
gi|288938046|gb|ADC68801.1| DNA ligase I, ATP-dependent Dnl1 [Methanocaldococcus sp. FS406-22]
Length = 573
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 22/32 (68%)
Query: 6 RCYSEIKYDGERVQVHKKGNEFKYFSRSLKPV 37
R E KYDG RVQ+HK GN+ K +SR L+ V
Sbjct: 244 RAQFETKYDGARVQIHKDGNKVKIYSRRLEDV 275
>gi|133892266|ref|NP_034845.2| DNA ligase 1 [Mus musculus]
gi|133892807|ref|NP_001076657.1| DNA ligase 1 [Mus musculus]
gi|313151236|ref|NP_001186239.1| DNA ligase 1 [Mus musculus]
gi|74150551|dbj|BAE32302.1| unnamed protein product [Mus musculus]
gi|187952925|gb|AAI38542.1| Lig1 protein [Mus musculus]
gi|223459942|gb|AAI38543.1| Lig1 protein [Mus musculus]
Length = 932
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 8/59 (13%)
Query: 45 VWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDWKTATNLPELKVLFKK 95
VWE+ A+ S + I+ A GIS+RFPR ++R DK + AT ++ L++K
Sbjct: 855 VWEVKCADLSLSPIYPAARGLVDKEKGISLRFPRFIRVRKDKQPEQATTSNQVASLYRK 913
>gi|148706114|gb|EDL38061.1| ligase I, DNA, ATP-dependent, isoform CRA_b [Mus musculus]
Length = 938
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 8/59 (13%)
Query: 45 VWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDWKTATNLPELKVLFKK 95
VWE+ A+ S + I+ A GIS+RFPR ++R DK + AT ++ L++K
Sbjct: 861 VWEVKCADLSLSPIYPAARGLVDKEKGISLRFPRFIRVRKDKQPEQATTSNQVASLYRK 919
>gi|47216720|emb|CAG00994.1| unnamed protein product [Tetraodon nigroviridis]
Length = 896
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 4 NERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
N Y + K DGER+Q+HK G+ +KYFSR+
Sbjct: 261 NSLFYIQTKLDGERIQLHKDGDVYKYFSRN 290
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 38 LEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELK 90
+E + + ++ AE ++++ ++RFPR+ +IR+DK+W L +L+
Sbjct: 540 IEPRNSVIIQVKAAEIVSSDMYKT-SCTLRFPRIERIREDKEWHECMTLAQLE 591
>gi|114799722|ref|YP_760378.1| putative DNA ligase, ATP-dependent [Hyphomonas neptunium ATCC
15444]
gi|114739896|gb|ABI78021.1| putative DNA ligase, ATP-dependent [Hyphomonas neptunium ATCC
15444]
Length = 532
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
Query: 14 DGERVQVHK--KGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRV 71
D E V++ K +GN F PVLE + + V E++ ++++ H + G+++RFPR+
Sbjct: 448 DEELVRLDKFVRGNITARFG----PVLEVRKELVLEVAFDSIAESKRHKS-GVAMRFPRI 502
Query: 72 TKIRDDKDWKTATNLPELKVLFKKSKETSD 101
+IR DK A + L+ L ++ ++
Sbjct: 503 NRIRWDKPAAEADTVANLRALMGQASSAAE 532
>gi|291393221|ref|XP_002713071.1| PREDICTED: DNA ligase (ATP) 4-like [Oryctolagus cuniculus]
Length = 911
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 21 HKKGNEFKYFSRSLKP--VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDK 78
H+K + KP +E + + ++ AE + ++ G ++RFPR+ KIRDDK
Sbjct: 530 HRKAPPGSILCGTEKPEVYIEPRNSVIVQVKAAEIVPSTMYKT-GCTLRFPRIEKIRDDK 588
Query: 79 DWKTATNLPELKVL 92
+W L +L+ L
Sbjct: 589 EWHECMTLDDLEQL 602
Score = 39.7 bits (91), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 3 KNERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
K++ Y E K DGER+Q+HK G+ ++YFSR+
Sbjct: 264 KHQSFYIETKLDGERMQMHKDGDVYQYFSRN 294
>gi|148706115|gb|EDL38062.1| ligase I, DNA, ATP-dependent, isoform CRA_c [Mus musculus]
Length = 932
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 8/59 (13%)
Query: 45 VWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDWKTATNLPELKVLFKK 95
VWE+ A+ S + I+ A GIS+RFPR ++R DK + AT ++ L++K
Sbjct: 855 VWEVKCADLSLSPIYPAARGLVDKEKGISLRFPRFIRVRKDKQPEQATTSNQVASLYRK 913
>gi|242058367|ref|XP_002458329.1| hypothetical protein SORBIDRAFT_03g031440 [Sorghum bicolor]
gi|241930304|gb|EES03449.1| hypothetical protein SORBIDRAFT_03g031440 [Sorghum bicolor]
Length = 104
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 15/88 (17%)
Query: 13 YDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GI 64
Y GER+ K Y+ +P L A+ +WEI GA+ + + +H A GI
Sbjct: 5 YSGERILPKKP----VYYKTDEQPELWFTAEQIWEIRGADLTLSPVHHAAIGLVHPSRGI 60
Query: 65 SIRFPRVTKIRDDK---DWKTATNLPEL 89
S+R PR + D+ D TAT++ +
Sbjct: 61 SVRMPRYIRSVPDRSPEDCGTATDIASM 88
>gi|148706113|gb|EDL38060.1| ligase I, DNA, ATP-dependent, isoform CRA_a [Mus musculus]
Length = 934
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 8/59 (13%)
Query: 45 VWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDWKTATNLPELKVLFKK 95
VWE+ A+ S + I+ A GIS+RFPR ++R DK + AT ++ L++K
Sbjct: 857 VWEVKCADLSLSPIYPAARGLVDKEKGISLRFPRFIRVRKDKQPEQATTSNQVASLYRK 915
>gi|20271416|gb|AAH28287.1| Lig1 protein [Mus musculus]
Length = 916
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 8/59 (13%)
Query: 45 VWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDWKTATNLPELKVLFKK 95
VWE+ A+ S + I+ A GIS+RFPR ++R DK + AT ++ L++K
Sbjct: 839 VWEVKCADLSLSPIYPAARGLVDKEKGISLRFPRFIRVRKDKQPEQATTSNQVASLYRK 897
>gi|1352290|sp|P37913.2|DNLI1_MOUSE RecName: Full=DNA ligase 1; AltName: Full=DNA ligase I; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 1
gi|641912|gb|AAB60500.1| DNA ligase I [Mus musculus]
gi|905354|gb|AAA70403.1| DNA ligase I [Mus musculus]
Length = 916
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 8/59 (13%)
Query: 45 VWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDWKTATNLPELKVLFKK 95
VWE+ A+ S + I+ A GIS+RFPR ++R DK + AT ++ L++K
Sbjct: 839 VWEVKCADLSLSPIYPAARGLVDKEKGISLRFPRFIRVRKDKQPEQATTSNQVASLYRK 897
>gi|296420167|ref|XP_002839652.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295635835|emb|CAZ83843.1| unnamed protein product [Tuber melanosporum]
Length = 991
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 23/30 (76%)
Query: 63 GISIRFPRVTKIRDDKDWKTATNLPELKVL 92
G S+RFPR +IR+DKDW+TA ++ EL L
Sbjct: 635 GKSLRFPRFRQIREDKDWQTALSISELIAL 664
>gi|296109481|ref|YP_003616430.1| DNA ligase I, ATP-dependent Dnl1 [methanocaldococcus infernus ME]
gi|295434295|gb|ADG13466.1| DNA ligase I, ATP-dependent Dnl1 [Methanocaldococcus infernus ME]
Length = 565
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEI 48
E KYDG R+Q+HKKG++ K +SR L+ V + V EI
Sbjct: 245 ETKYDGARIQIHKKGDKVKIYSRKLEDVTHALPEIVNEI 283
>gi|15668343|ref|NP_247139.1| DNA ligase [Methanocaldococcus jannaschii DSM 2661]
gi|2494166|sp|Q57635.1|DNLI_METJA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|1590924|gb|AAB98156.1| DNA ligase (lig) [Methanocaldococcus jannaschii DSM 2661]
Length = 573
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 22/32 (68%)
Query: 6 RCYSEIKYDGERVQVHKKGNEFKYFSRSLKPV 37
R E KYDG RVQ+HK GN+ K +SR L+ V
Sbjct: 244 RAQFETKYDGARVQIHKDGNKVKIYSRRLEDV 275
>gi|358053749|dbj|GAB00057.1| hypothetical protein E5Q_06759 [Mixia osmundae IAM 14324]
Length = 1053
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 8/59 (13%)
Query: 45 VWEISGAEFS--------QAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKK 95
VWEI GA+ + Q I G+S+RFPR K+RDDK + A +L +++
Sbjct: 979 VWEIRGADLTLSPTYNAAQGLISAERGLSLRFPRFIKVRDDKSIEHAMTPQDLAAAYER 1037
>gi|335297113|ref|XP_003131137.2| PREDICTED: DNA ligase 4-like [Sus scrofa]
Length = 910
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 45 VWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
+ ++ AE ++++ G ++RFPR+ KIR+DK+W T L +L+ L K+
Sbjct: 556 IVQVKAAEIVPSDMYKT-GCTLRFPRIEKIREDKEWHECTTLDDLEHLRGKA 606
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 3 KNERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
K++ Y E K DGER+Q+HK G+ ++YFSR+
Sbjct: 264 KHQSFYIETKLDGERMQMHKDGDVYQYFSRN 294
>gi|268575258|ref|XP_002642608.1| C. briggsae CBR-LIG-4 protein [Caenorhabditis briggsae]
Length = 721
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 25/30 (83%)
Query: 4 NERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
++ + +IK+DGE V +HKKGNE+++F+R+
Sbjct: 245 GQKFFLQIKFDGENVLLHKKGNEYRWFTRN 274
>gi|238590895|ref|XP_002392454.1| hypothetical protein MPER_07964 [Moniliophthora perniciosa FA553]
gi|215458513|gb|EEB93384.1| hypothetical protein MPER_07964 [Moniliophthora perniciosa FA553]
Length = 257
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 8/73 (10%)
Query: 33 SLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTAT 84
LKP + K VWEI GA+ + + + A G+S+RFPR K R+DK A+
Sbjct: 153 GLKPEVYFKPTEVWEIRGADITISPVSLAAKGIISSNKGLSLRFPRFIKTREDKSVNQAS 212
Query: 85 NLPELKVLFKKSK 97
L L++ K
Sbjct: 213 TPEFLANLWRSQK 225
>gi|440898658|gb|ELR50104.1| DNA ligase 4, partial [Bos grunniens mutus]
Length = 916
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 3 KNERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
K++ Y E K DGER+Q+HK G+ ++YFSR+
Sbjct: 269 KHQSFYIETKLDGERMQMHKDGDVYRYFSRN 299
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 25/34 (73%)
Query: 63 GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
G ++RFPR+ KIR+DK+W T+L +L+ L K+
Sbjct: 578 GCTLRFPRIEKIREDKEWYECTSLEDLEQLRGKA 611
>gi|340054328|emb|CCC48624.1| putative DNA ligase I [Trypanosoma vivax Y486]
Length = 696
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 8/74 (10%)
Query: 28 KYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKD 79
+Y+ K + +A VWE+ A+ S + H A GI++RFPR ++R+DK
Sbjct: 609 RYYRTEDKADVWLQASQVWEVRAADLSISPAHFAAYGLVDPSKGIALRFPRFVRVREDKQ 668
Query: 80 WKTATNLPELKVLF 93
AT+ ++ ++
Sbjct: 669 AHEATSALQVAEMY 682
>gi|300798388|ref|NP_001178055.1| DNA ligase 4 [Bos taurus]
gi|296481593|tpg|DAA23708.1| TPA: ligase IV, DNA, ATP-dependent [Bos taurus]
Length = 911
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 3 KNERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
K++ Y E K DGER+Q+HK G+ ++YFSR+
Sbjct: 264 KHQSFYIETKLDGERMQMHKDGDVYRYFSRN 294
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 25/34 (73%)
Query: 63 GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
G ++RFPR+ KIR+DK+W T+L +L+ L K+
Sbjct: 573 GCTLRFPRIEKIREDKEWYECTSLEDLEQLRGKA 606
>gi|14423666|sp|Q9JHY8.1|DNLI1_RAT RecName: Full=DNA ligase 1; AltName: Full=DNA ligase I; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 1
gi|9050023|gb|AAF82585.1|AF276774_1 DNA ligase I [Rattus norvegicus]
Length = 918
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 8/59 (13%)
Query: 45 VWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDWKTATNLPELKVLFKK 95
VWE+ A+ + + I+ A GIS+RFPR ++R+DK + AT ++ L++K
Sbjct: 841 VWEVKCADLTLSPIYRAARGMVDKEKGISLRFPRFIRVREDKQPEQATTSDQVASLYRK 899
>gi|149248698|ref|XP_001528736.1| ATP-dependent DNA ligase [Lodderomyces elongisporus NRRL YB-4239]
gi|146448690|gb|EDK43078.1| ATP-dependent DNA ligase [Lodderomyces elongisporus NRRL YB-4239]
Length = 990
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 1 MAKNERCYSEIKYDGERVQVHKKGNEFKYFSRSLK 35
M + Y E K DG+R+ +HK+GN FK++SR LK
Sbjct: 320 MGLESKFYIEEKMDGDRMLLHKEGNNFKFYSRRLK 354
>gi|426236659|ref|XP_004012285.1| PREDICTED: DNA ligase 4 [Ovis aries]
Length = 911
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 3 KNERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
K++ Y E K DGER+Q+HK G+ ++YFSR+
Sbjct: 264 KHQSFYIETKLDGERMQMHKDGDVYRYFSRN 294
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 25/34 (73%)
Query: 63 GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
G ++RFPR+ KIR+DK+W T+L +L+ L K+
Sbjct: 573 GCTLRFPRIEKIREDKEWYECTSLEDLEQLRGKA 606
>gi|403182469|gb|EJY57407.1| AAEL017561-PA, partial [Aedes aegypti]
Length = 798
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 23/33 (69%)
Query: 1 MAKNERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
M K + + E K DGER Q+HK+G +KYFSR+
Sbjct: 262 MLKKDEFWLETKMDGERFQIHKEGQIYKYFSRN 294
>gi|386783456|pdb|4EQ5|A Chain A, Dna Ligase From The Archaeon Thermococcus Sibiricus
Length = 571
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/28 (64%), Positives = 21/28 (75%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSRSLKPV 37
EIKYDG RVQVHK GN+ +SR L+ V
Sbjct: 259 EIKYDGARVQVHKNGNKVLIYSRRLENV 286
>gi|448513145|ref|XP_003866875.1| Lig4 DNA ligase [Candida orthopsilosis Co 90-125]
gi|380351213|emb|CCG21436.1| Lig4 DNA ligase [Candida orthopsilosis Co 90-125]
Length = 941
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 5 ERCYSEIKYDGERVQVHKKGNEFKYFSRSLK 35
++ Y E K DG+R+ +HK+GN FK+FSR LK
Sbjct: 297 DKFYIEEKMDGDRMLLHKEGNRFKFFSRRLK 327
>gi|242398869|ref|YP_002994293.1| DNA ligase [Thermococcus sibiricus MM 739]
gi|242265262|gb|ACS89944.1| DNA ligase [Thermococcus sibiricus MM 739]
Length = 560
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/28 (64%), Positives = 21/28 (75%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSRSLKPV 37
EIKYDG RVQVHK GN+ +SR L+ V
Sbjct: 248 EIKYDGARVQVHKNGNKVLIYSRRLENV 275
>gi|330835781|ref|YP_004410509.1| ATP-dependent DNA ligase [Metallosphaera cuprina Ar-4]
gi|329567920|gb|AEB96025.1| ATP-dependent DNA ligase [Metallosphaera cuprina Ar-4]
Length = 598
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 5/56 (8%)
Query: 45 VWEISGAEFSQAEIHTA-----DGISIRFPRVTKIRDDKDWKTATNLPELKVLFKK 95
V EI GAE + + +HT G+SIRFPR + RDDK + AT E+ ++ +
Sbjct: 529 VAEIIGAEITISPLHTCCKNDKAGLSIRFPRFVRWRDDKSPEDATTNQEIMEMYSR 584
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 4 NERCYSEIKYDGERVQVHKKGNEFKYFSRSLKPV 37
N + KYDGER Q+HKKG + FSR ++ +
Sbjct: 253 NGNALVDYKYDGERAQIHKKGEDIYIFSRRMENI 286
>gi|432911802|ref|XP_004078727.1| PREDICTED: DNA ligase 1-like [Oryzias latipes]
Length = 974
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 32 RSLKPVLEHKAQPVWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDWKTA 83
+S +P + A VWE+ A+ S + ++ A GIS+RFPR +IRDDK + A
Sbjct: 905 QSAEPDVWLDAVQVWEVKCADLSLSPVYKAAMGLVDPEKGISLRFPRFLRIRDDKKPEDA 964
Query: 84 TN 85
T+
Sbjct: 965 TS 966
>gi|345496864|ref|XP_003427838.1| PREDICTED: general transcription factor 3C polypeptide 3-like
isoform 2 [Nasonia vitripennis]
Length = 918
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 26/51 (50%), Gaps = 10/51 (19%)
Query: 63 GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKSK----------ETSDFT 103
G S+RFPRV KIR DK W A + E + L K K ETSD T
Sbjct: 576 GYSLRFPRVMKIRTDKPWYNACSTTEFESLVKNKKFVQKLTKRKAETSDIT 626
Score = 35.0 bits (79), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 18/25 (72%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSR 32
Y + K+DGER Q+H K FKYF+R
Sbjct: 270 YLQTKFDGERSQIHFKAGCFKYFTR 294
>gi|302903161|ref|XP_003048798.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729732|gb|EEU43085.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 856
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 11/67 (16%)
Query: 45 VWEISGAEFSQAEIHTAD-----------GISIRFPRVTKIRDDKDWKTATNLPELKVLF 93
VWE+ A+ + + + A GIS+RFPR +IRDDK+ +AT ++ ++
Sbjct: 777 VWEVKTADLTLSPRYKAGAKEGVDPSGTKGISLRFPRFIRIRDDKNADSATTSRQVAEMY 836
Query: 94 KKSKETS 100
+K + S
Sbjct: 837 RKQESVS 843
>gi|256810695|ref|YP_003128064.1| ATP-dependent DNA ligase I [Methanocaldococcus fervens AG86]
gi|256793895|gb|ACV24564.1| DNA ligase I, ATP-dependent Dnl1 [Methanocaldococcus fervens AG86]
Length = 573
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 23/32 (71%)
Query: 6 RCYSEIKYDGERVQVHKKGNEFKYFSRSLKPV 37
R E KYDG RVQ+HK+GN+ + +SR L+ V
Sbjct: 244 RAQFETKYDGARVQIHKEGNKVRIYSRRLEDV 275
>gi|74183394|dbj|BAE36577.1| unnamed protein product [Mus musculus]
Length = 699
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 8/59 (13%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKK 95
VWE+ A+ S + I+ A GIS+RFPR ++R DK + AT ++ L++K
Sbjct: 622 VWEVKCADLSLSPIYPAARGLVDKEKGISLRFPRFIRVRKDKQPEQATTSNQVASLYRK 680
>gi|156083667|ref|XP_001609317.1| DNA ligase I [Babesia bovis T2Bo]
gi|154796568|gb|EDO05749.1| DNA ligase I [Babesia bovis]
Length = 773
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 10/52 (19%)
Query: 43 QP--VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTAT 84
QP VWE A+ S + IHTA GI +RFPR ++R+DK AT
Sbjct: 704 QPAKVWECKAADLSISPIHTASQDMTASGKGIGLRFPRFVRLREDKKPMDAT 755
>gi|323454505|gb|EGB10375.1| hypothetical protein AURANDRAFT_36790 [Aureococcus anophagefferens]
Length = 786
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 8/65 (12%)
Query: 45 VWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
VWE+ A+ S ++ H GI +RFPR+ + RDDK ATN ++ ++ K
Sbjct: 708 VWEVQVADLSLSDTHKGALGRVKEGRGIGLRFPRLLRPRDDKTADEATNADQVLDMYLKQ 767
Query: 97 KETSD 101
D
Sbjct: 768 DSVKD 772
>gi|379642981|ref|NP_001243858.1| DNA ligase 4 [Equus caballus]
Length = 911
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 16/62 (25%)
Query: 3 KNERCYSEIKYDGERVQVHKKGNEFKYFSR----------------SLKPVLEHKAQPVW 46
K++ Y E K DGER+Q+HK G+ ++YFSR SL P + + QP
Sbjct: 264 KHQSFYIETKLDGERMQMHKHGDVYQYFSRNGYDYTDQFGDSPQEGSLTPFIHNAFQPDI 323
Query: 47 EI 48
+I
Sbjct: 324 QI 325
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 45 VWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
+ +I E ++++ G ++RFPR+ KIR+DK+W L +L+ L K+
Sbjct: 556 IVQIKATEIVSSDMYKT-GCTLRFPRIEKIREDKEWHECLTLDDLEQLRGKA 606
>gi|359419894|ref|ZP_09211840.1| ATP-dependent DNA ligase LigB [Gordonia araii NBRC 100433]
gi|358244264|dbj|GAB09909.1| ATP-dependent DNA ligase LigB [Gordonia araii NBRC 100433]
Length = 502
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 15/32 (46%), Positives = 22/32 (68%)
Query: 6 RCYSEIKYDGERVQVHKKGNEFKYFSRSLKPV 37
R + KYDG R+QVH+ G+E F+RSL+ +
Sbjct: 210 RVVVDAKYDGARIQVHRDGSEIAVFTRSLREI 241
>gi|332157848|ref|YP_004423127.1| ATP-dependent DNA ligase [Pyrococcus sp. NA2]
gi|331033311|gb|AEC51123.1| ATP-dependent DNA ligase [Pyrococcus sp. NA2]
Length = 559
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/28 (64%), Positives = 21/28 (75%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSRSLKPV 37
EIKYDG RVQVHK GN+ +SR L+ V
Sbjct: 247 EIKYDGARVQVHKDGNKVIVYSRRLENV 274
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 49/93 (52%), Gaps = 14/93 (15%)
Query: 15 GERVQVHKKGNEFK-----YFSRSLKP-VLEHKAQPVW-------EISGAEFSQAEIHTA 61
GE V+V K G+ F F++ LKP +++ + + VW E++ E ++ + +
Sbjct: 459 GEFVEVGKVGSGFTDDDLLEFTKMLKPLIIKEEGKRVWVQPKIVIEVTYQEIQKSPKYKS 518
Query: 62 DGISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
G ++RFPR +RDDK + A + + L++
Sbjct: 519 -GFALRFPRYVALRDDKSPEDADTIERIAQLYE 550
>gi|410906057|ref|XP_003966508.1| PREDICTED: DNA ligase 4-like [Takifugu rubripes]
Length = 908
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 4 NERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
N Y + K DGER+Q+HK G+ +KYFSR+
Sbjct: 269 NSPFYIQTKLDGERIQLHKDGDVYKYFSRN 298
Score = 38.5 bits (88), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 45 VWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPEL 89
+ ++ AE ++++ D ++RFPR+ KIR+DK+W L EL
Sbjct: 560 IIQVKAAEIVGSDMYKTD-CTLRFPRIEKIREDKEWHECMTLAEL 603
>gi|333920414|ref|YP_004493995.1| putative DNA ligase [Amycolicicoccus subflavus DQS3-9A1]
gi|333482635|gb|AEF41195.1| putative DNA ligase [Amycolicicoccus subflavus DQS3-9A1]
Length = 502
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 14/28 (50%), Positives = 22/28 (78%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSRSLKPV 37
E K+DG R+QVH+ G+E + F+RSL+ +
Sbjct: 210 EYKFDGARIQVHRAGSEVRIFTRSLREI 237
>gi|126466208|ref|YP_001041317.1| ATP-dependent DNA ligase [Staphylothermus marinus F1]
gi|91177882|gb|ABE27150.1| ATP-dependent DNA ligase [Staphylothermus marinus]
gi|126015031|gb|ABN70409.1| DNA ligase I, ATP-dependent Dnl1 [Staphylothermus marinus F1]
Length = 611
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 8/59 (13%)
Query: 45 VWEISGAEFSQAEIHT--------ADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKK 95
V EI GAE + + +HT GISIRFPR + R DK + AT EL ++K+
Sbjct: 546 VAEIIGAELTLSPLHTCCLDIIKPGVGISIRFPRFIRWRPDKGPEDATTSQELLEMYKR 604
Score = 34.7 bits (78), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%)
Query: 7 CYSEIKYDGERVQVHKKGNEFKYFSRSLKPV 37
+ E KYDGER Q+HK G++ +SR L+ +
Sbjct: 273 AFVEYKYDGERAQIHKLGDKIWIYSRRLENI 303
>gi|357508239|ref|XP_003624408.1| DNA ligase [Medicago truncatula]
gi|355499423|gb|AES80626.1| DNA ligase [Medicago truncatula]
Length = 1498
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 11/72 (15%)
Query: 29 YFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPR-VTKI--RDD 77
Y+ P + Q VWEI GA+F+ + +H A GISIRFPR + ++ R+
Sbjct: 1413 YYQTGETPDMWFCPQLVWEIRGADFTVSPVHHAAIGLVHPSRGISIRFPRFICRVSDRNP 1472
Query: 78 KDWKTATNLPEL 89
+ TA ++ E+
Sbjct: 1473 DECSTAADIVEM 1484
>gi|297527107|ref|YP_003669131.1| DNA ligase I, ATP-dependent Dnl1 [Staphylothermus hellenicus DSM
12710]
gi|297256023|gb|ADI32232.1| DNA ligase I, ATP-dependent Dnl1 [Staphylothermus hellenicus DSM
12710]
Length = 611
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 8/70 (11%)
Query: 34 LKPVLEHKAQPVWEISGAEFSQAEIHT--------ADGISIRFPRVTKIRDDKDWKTATN 85
+KP + V EI GAE + + +HT GISIRFPR + R DK + AT
Sbjct: 535 MKPDIWVTPALVAEIIGAELTLSPLHTCCLDAIKPGVGISIRFPRFIRWRPDKGPEDATT 594
Query: 86 LPELKVLFKK 95
EL ++K+
Sbjct: 595 SQELLEMYKR 604
Score = 34.3 bits (77), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%)
Query: 7 CYSEIKYDGERVQVHKKGNEFKYFSRSLKPV 37
+ E KYDGER Q+HK G++ +SR L+ +
Sbjct: 273 SFVEYKYDGERAQIHKLGDKIWIYSRRLENI 303
>gi|444706089|gb|ELW47449.1| DNA ligase 4 [Tupaia chinensis]
Length = 844
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 3 KNERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
K++ Y E K DGER+Q+HK G+ ++YFSR+
Sbjct: 197 KHQSFYIETKLDGERMQMHKDGDVYQYFSRN 227
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 45 VWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
+ +I AE ++++ G ++RFPR+ +IRDDK W L +L+ L K+
Sbjct: 489 IVQIKAAEIVPSDMYKT-GCTLRFPRIERIRDDKVWHECMTLGDLEQLRGKA 539
>gi|62859221|ref|NP_001016981.1| DNA ligase (ATP) 4 [Xenopus (Silurana) tropicalis]
gi|89271325|emb|CAJ82384.1| ligase IV, DNA, ATP-dependent [Xenopus (Silurana) tropicalis]
gi|134026052|gb|AAI35342.1| ligase IV, DNA, ATP-dependent [Xenopus (Silurana) tropicalis]
Length = 911
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 16/26 (61%), Positives = 21/26 (80%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRS 33
Y E K DGER+Q+HK G+ +KYFSR+
Sbjct: 274 YIETKLDGERMQMHKDGDVYKYFSRN 299
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 4/44 (9%)
Query: 51 AEFSQAEIHTAD----GISIRFPRVTKIRDDKDWKTATNLPELK 90
+ AEI T+D G ++RFPR+ KIR+DK+W L +L+
Sbjct: 562 VQIKAAEIVTSDMYKTGCTLRFPRIEKIREDKEWYDCMTLDDLE 605
>gi|222629503|gb|EEE61635.1| hypothetical protein OsJ_16077 [Oryza sativa Japonica Group]
Length = 1322
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 25/37 (67%), Gaps = 3/37 (8%)
Query: 4 NERCYSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEH 40
++ +E K+DG+R+Q+HK G E +FSRS L+H
Sbjct: 259 GKQVVAECKFDGDRIQIHKNGEEIHFFSRSF---LDH 292
>gi|75140457|sp|Q7X7E9.2|DNLI4_ORYSJ RecName: Full=Putative DNA ligase 4; AltName: Full=DNA ligase IV;
AltName: Full=Polydeoxyribonucleotide synthase [ATP] 4
gi|38346547|emb|CAD41778.2| OSJNBa0035M09.8 [Oryza sativa Japonica Group]
Length = 1322
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 23/32 (71%), Gaps = 3/32 (9%)
Query: 9 SEIKYDGERVQVHKKGNEFKYFSRSLKPVLEH 40
+E K+DG+R+Q+HK G E +FSRS L+H
Sbjct: 264 AECKFDGDRIQIHKNGEEIHFFSRSF---LDH 292
>gi|359773621|ref|ZP_09277014.1| putative DNA ligase [Gordonia effusa NBRC 100432]
gi|359309234|dbj|GAB19792.1| putative DNA ligase [Gordonia effusa NBRC 100432]
Length = 505
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPV 45
+ KYDG R+QVH+ G++ + F+R+L V E A V
Sbjct: 211 DYKYDGARIQVHRDGDQVRIFTRTLNEVTERLADIV 246
>gi|385805348|ref|YP_005841746.1| ATP-dependent DNA ligase [Fervidicoccus fontis Kam940]
gi|383795211|gb|AFH42294.1| ATP-dependent DNA ligase [Fervidicoccus fontis Kam940]
Length = 599
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 21/32 (65%)
Query: 6 RCYSEIKYDGERVQVHKKGNEFKYFSRSLKPV 37
+ Y E KYDGER Q+HK +E FSR L+ +
Sbjct: 256 KAYVEYKYDGERAQIHKSNDEITIFSRRLENI 287
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 8/58 (13%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
V E+ GAE + + +HT G+SIRFPR R DK + AT EL +++
Sbjct: 530 VVEVIGAELTLSPLHTCAKGEISKEAGLSIRFPRFINWRPDKGPEDATTCKELVEMYR 587
>gi|116309733|emb|CAH66777.1| OSIGBa0113I13.3 [Oryza sativa Indica Group]
Length = 1281
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 25/37 (67%), Gaps = 3/37 (8%)
Query: 4 NERCYSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEH 40
++ +E K+DG+R+Q+HK G E +FSRS L+H
Sbjct: 245 GKQVVAECKFDGDRIQIHKNGEEIHFFSRSF---LDH 278
>gi|290559352|gb|EFD92686.1| DNA ligase I, ATP-dependent Dnl1 [Candidatus Parvarchaeum
acidophilus ARMAN-5]
Length = 576
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 1 MAKNERCYSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEI 48
+++ +C + K DG R QVHK G E K FSR+L+ + + V EI
Sbjct: 235 ISRMGKCAIDQKLDGFRAQVHKNGQEIKVFSRNLENITHFMPEVVNEI 282
>gi|218195520|gb|EEC77947.1| hypothetical protein OsI_17298 [Oryza sativa Indica Group]
Length = 1322
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 25/37 (67%), Gaps = 3/37 (8%)
Query: 4 NERCYSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEH 40
++ +E K+DG+R+Q+HK G E +FSRS L+H
Sbjct: 259 GKQVVAECKFDGDRIQIHKNGEEIHFFSRSF---LDH 292
>gi|302680743|ref|XP_003030053.1| hypothetical protein SCHCODRAFT_235879 [Schizophyllum commune H4-8]
gi|300103744|gb|EFI95150.1| hypothetical protein SCHCODRAFT_235879 [Schizophyllum commune H4-8]
Length = 823
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 12/82 (14%)
Query: 24 GNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIR 75
G +F F +P + K VWE+ A+ + + + A G+S+RFPR K R
Sbjct: 710 GGDFGGF----RPEVYFKPHEVWEVRAADITVSPVSVAAKGLVSDSRGLSLRFPRYIKTR 765
Query: 76 DDKDWKTATNLPELKVLFKKSK 97
+DK + AT ++ ++++ +
Sbjct: 766 EDKGIEEATTASQVARMYQQQQ 787
>gi|429217614|ref|YP_007175604.1| ATP-dependent DNA ligase [Caldisphaera lagunensis DSM 15908]
gi|429134143|gb|AFZ71155.1| ATP-dependent DNA ligase [Caldisphaera lagunensis DSM 15908]
Length = 610
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 8/65 (12%)
Query: 33 SLKPVLEHKAQPVWEISGAEFSQAEIHT--------ADGISIRFPRVTKIRDDKDWKTAT 84
S++P L + V EI GAE + + +HT G+SIRFPR + R+DK + AT
Sbjct: 523 SIEPDLWFEPVRVAEIIGAELTLSPLHTCCYNKLKEGAGLSIRFPRFIRWREDKGPEDAT 582
Query: 85 NLPEL 89
EL
Sbjct: 583 TEEEL 587
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 21/32 (65%)
Query: 6 RCYSEIKYDGERVQVHKKGNEFKYFSRSLKPV 37
+ + E KYDGER Q HK G+ + FSR L+ +
Sbjct: 261 KGFVEYKYDGERGQFHKDGDNVRIFSRRLEDI 292
>gi|224487994|sp|A3DP49.2|DNLI_STAMF RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
Length = 597
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 8/59 (13%)
Query: 45 VWEISGAEFSQAEIHT--------ADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKK 95
V EI GAE + + +HT GISIRFPR + R DK + AT EL ++K+
Sbjct: 532 VAEIIGAELTLSPLHTCCLDIIKPGVGISIRFPRFIRWRPDKGPEDATTSQELLEMYKR 590
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%)
Query: 7 CYSEIKYDGERVQVHKKGNEFKYFSRSLKPV 37
+ E KYDGER Q+HK G++ +SR L+ +
Sbjct: 259 AFVEYKYDGERAQIHKLGDKIWIYSRRLENI 289
>gi|73989476|ref|XP_542663.2| PREDICTED: DNA ligase 4 [Canis lupus familiaris]
Length = 911
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 3 KNERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
K++ Y E K DGER+Q+HK G+ ++YFSR+
Sbjct: 264 KHQSFYIETKLDGERMQMHKDGDVYQYFSRN 294
Score = 37.7 bits (86), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 45 VWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
+ ++ E ++++ G ++RFPR+ KIR+DK+W T + +L+ L K+
Sbjct: 556 IVQVKATEIVSSDMYKT-GCTLRFPRIEKIREDKEWHECTTVDDLEQLRGKA 606
>gi|405978527|gb|EKC42907.1| DNA ligase 4 [Crassostrea gigas]
Length = 915
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 38 LEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELK 90
+E K + +I AE +E G ++RFPRV K RDDK W +PE++
Sbjct: 555 IEPKNSCIVQIKAAEVIDSE-RFKTGFTLRFPRVEKFRDDKAWYECMTVPEVQ 606
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/24 (62%), Positives = 20/24 (83%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSRS 33
E K+DGER+ +HK+ E+KYFSRS
Sbjct: 275 ETKFDGERILLHKQEGEYKYFSRS 298
>gi|374327751|ref|YP_005085951.1| DNA ligase [Pyrobaculum sp. 1860]
gi|356643020|gb|AET33699.1| DNA ligase [Pyrobaculum sp. 1860]
Length = 563
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 9/67 (13%)
Query: 43 QPVWEISGAEFSQAEIHT--------ADGISIRFPRVT-KIRDDKDWKTATNLPELKVLF 93
Q V E+ GAE + + +HT G+++RFPR T + R DK + AT + E+ L+
Sbjct: 494 QVVIEVIGAEITLSPLHTCCLGAVRPGVGLAVRFPRFTGRYRSDKSPEQATTVAEMLELY 553
Query: 94 KKSKETS 100
K+ K+ +
Sbjct: 554 KRQKKVA 560
>gi|406913555|gb|EKD52923.1| hypothetical protein ACD_61C00193G0001 [uncultured bacterium]
Length = 417
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 31 SRSLKPVLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELK 90
S SL P + + V EI+ E +++ H A GI++RFPR+ K R+DK K AT E++
Sbjct: 351 SGSLVPDVWVEPLVVVEIAADEITKSPNH-AGGIALRFPRLIKFREDKGPKDATTWKEVE 409
Query: 91 VLFKKS 96
+ K S
Sbjct: 410 EIAKLS 415
>gi|171184553|ref|YP_001793472.1| ATP-dependent DNA ligase [Pyrobaculum neutrophilum V24Sta]
gi|224487911|sp|B1YA52.1|DNLI_THENV RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|170933765|gb|ACB39026.1| DNA ligase I, ATP-dependent Dnl1 [Pyrobaculum neutrophilum V24Sta]
Length = 584
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 9/101 (8%)
Query: 9 SEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHT-------- 60
+++K E +Q +K + + P + Q V E+ GAE + + +HT
Sbjct: 481 ADLKKMYEVLQPYKIPHRHPRVVSKMTPDVWFTPQVVIEVIGAEITLSPLHTCCLGAVRP 540
Query: 61 ADGISIRFPRVT-KIRDDKDWKTATNLPELKVLFKKSKETS 100
G++IRFPR T + R DK + AT E+ L+K+ K+ +
Sbjct: 541 GVGLAIRFPRFTGRYRTDKSPEQATTPAEMVELYKRQKKVA 581
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 15/28 (53%), Positives = 18/28 (64%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSRSLKPV 37
E KYDGER Q+H G K FSR L+ +
Sbjct: 249 EYKYDGERAQIHISGGSVKIFSRRLEDI 276
>gi|328860573|gb|EGG09678.1| hypothetical protein MELLADRAFT_34116 [Melampsora larici-populina
98AG31]
Length = 695
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 9/52 (17%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNLPE 88
VWEI GA+ + + ++ A G+S+RFPR +IRDDK + A++ PE
Sbjct: 632 VWEIRGADITLSPVYKAAQGLIDPDRGLSLRFPRFYRIRDDKGVEDASH-PE 682
>gi|348583744|ref|XP_003477632.1| PREDICTED: DNA ligase 4-like [Cavia porcellus]
Length = 911
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 3 KNERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
K + Y E K DGER+Q+HK G+ ++YFSR+
Sbjct: 264 KQQSFYIETKLDGERMQMHKDGDVYRYFSRN 294
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 21 HKKGNEFKYFSRSLKP--VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDK 78
HKK + KP +E + +I AE +E++ ++RFPR+ KIRDDK
Sbjct: 530 HKKAPPSSILCGTEKPEVYIEPCHSVIVQIKAAEIVPSEMYKT-CCTLRFPRIEKIRDDK 588
Query: 79 DWKTATNLPELKVLFKKS 96
+W L +L+ L K+
Sbjct: 589 EWHECMTLDQLEQLGGKA 606
>gi|342874135|gb|EGU76205.1| hypothetical protein FOXB_13277 [Fusarium oxysporum Fo5176]
Length = 869
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 9/108 (8%)
Query: 4 NERCYSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD- 62
N + Y + + GE K F +S +P + + Q VWE++ A+ + + +TA
Sbjct: 747 NRQFYDDGEESGEPKNTRTKQPAFVEYSGP-RPDIWFEPQEVWEMAFADITLSPTYTAAI 805
Query: 63 -------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKSKETSDFT 103
G+S+RFPR K R+DK + A+ L L++K + ++ T
Sbjct: 806 GLVSDERGLSLRFPRFMKKREDKSLEEASTNDFLAGLWRKQEAKAETT 853
>gi|4099066|gb|AAD00532.1| DNA ligase [Pyrobaculum aerophilum str. IM2]
Length = 589
Score = 39.3 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 9/65 (13%)
Query: 43 QPVWEISGAEFSQAEIHT--------ADGISIRFPRVT-KIRDDKDWKTATNLPELKVLF 93
Q V E+ GAE + + +HT G+++RFPR T + R DK + AT + E+ L+
Sbjct: 520 QVVIEVIGAEITLSPLHTCCLGAVRPGVGLAVRFPRFTGRYRSDKSPEQATTVAEMLELY 579
Query: 94 KKSKE 98
K+ K+
Sbjct: 580 KRQKK 584
>gi|336244793|gb|AEI28314.1| ATP-dependent DNA ligase IV, partial [Dibamus bourreti]
Length = 352
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 21/26 (80%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRS 33
Y E K DGER+Q+H+ G+ +KYFSR+
Sbjct: 184 YIETKLDGERMQMHRDGDVYKYFSRN 209
>gi|336384240|gb|EGO25388.1| hypothetical protein SERLADRAFT_348456 [Serpula lacrymans var.
lacrymans S7.9]
Length = 799
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 8/68 (11%)
Query: 26 EFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDD 77
+++ + P + K + VWEI GA+ + + + A G+S+RFPR ++RDD
Sbjct: 688 QWECITGGFDPDVYFKPREVWEIRGADVTLSPVSLAAMGLVSQTRGLSLRFPRFIRVRDD 747
Query: 78 KDWKTATN 85
K + A+
Sbjct: 748 KSIEHAST 755
>gi|432330028|ref|YP_007248171.1| ATP-dependent DNA ligase I [Methanoregula formicicum SMSP]
gi|432136737|gb|AGB01664.1| ATP-dependent DNA ligase I [Methanoregula formicicum SMSP]
Length = 551
Score = 39.3 bits (90), Expect = 0.35, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 9/75 (12%)
Query: 34 LKPVLEHKA------QP--VWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATN 85
LK +E KA +P V+E+ AE QA ++ G ++RFPR +IRDDKD
Sbjct: 472 LKDTVERKAGKEVTFEPTLVFEVGYAEL-QASVNYEAGFALRFPRFIRIRDDKDIADIET 530
Query: 86 LPELKVLFKKSKETS 100
+ ++ +++ T+
Sbjct: 531 IESIRARYQRQVNTA 545
Score = 37.7 bits (86), Expect = 0.95, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 9 SEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGA 51
+E KYDG R Q HKKGN + +SR L+ V + ++ GA
Sbjct: 243 AEFKYDGSRFQFHKKGNWARLYSRRLEDVTAALPDVIGQLMGA 285
>gi|449463583|ref|XP_004149513.1| PREDICTED: DNA ligase 4-like [Cucumis sativus]
Length = 1214
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 23/32 (71%), Gaps = 3/32 (9%)
Query: 9 SEIKYDGERVQVHKKGNEFKYFSRSLKPVLEH 40
+E K+DG+R+Q+HK G E YFSR+ L+H
Sbjct: 249 AECKFDGDRIQIHKNGTEVHYFSRNF---LDH 277
>gi|301760197|ref|XP_002915906.1| PREDICTED: DNA ligase 4-like [Ailuropoda melanoleuca]
gi|281351498|gb|EFB27082.1| hypothetical protein PANDA_003934 [Ailuropoda melanoleuca]
Length = 911
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 25/31 (80%)
Query: 3 KNERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
K++ Y E K DGER+Q+H++G+ ++YFSR+
Sbjct: 264 KHQSFYIETKLDGERMQMHRQGDVYQYFSRN 294
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 21 HKKGNEFKYFSRSLKP--VLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDK 78
HKK + KP +E + ++ E ++++ A G ++RFPR+ +IR+DK
Sbjct: 530 HKKAPPSSILCGTEKPEVYIEPCHSVIVQVKATEIVSSDMYKA-GCTLRFPRIERIREDK 588
Query: 79 DWKTATNLPELKVLFKKS 96
+W T + +L+ L K+
Sbjct: 589 EWHECTTVDDLEQLRGKA 606
>gi|336371479|gb|EGN99818.1| hypothetical protein SERLA73DRAFT_106637 [Serpula lacrymans var.
lacrymans S7.3]
Length = 876
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 8/68 (11%)
Query: 26 EFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDD 77
+++ + P + K + VWEI GA+ + + + A G+S+RFPR ++RDD
Sbjct: 765 QWECITGGFDPDVYFKPREVWEIRGADVTLSPVSLAAMGLVSQTRGLSLRFPRFIRVRDD 824
Query: 78 KDWKTATN 85
K + A+
Sbjct: 825 KSIEHAST 832
>gi|374851947|dbj|BAL54893.1| DNA ligase 1 [uncultured Acidobacteria bacterium]
Length = 582
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 17/30 (56%), Positives = 22/30 (73%)
Query: 6 RCYSEIKYDGERVQVHKKGNEFKYFSRSLK 35
RC E+K DG R QVHK+GN + FSR+L+
Sbjct: 244 RCAVEVKIDGFRCQVHKQGNTVEIFSRNLE 273
>gi|18312215|ref|NP_558882.1| ATP-dependent DNA ligase [Pyrobaculum aerophilum str. IM2]
gi|14423669|sp|O93723.2|DNLI_PYRAE RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|18159655|gb|AAL63064.1| DNA ligase [Pyrobaculum aerophilum str. IM2]
Length = 584
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 9/65 (13%)
Query: 43 QPVWEISGAEFSQAEIHT--------ADGISIRFPRVT-KIRDDKDWKTATNLPELKVLF 93
Q V E+ GAE + + +HT G+++RFPR T + R DK + AT + E+ L+
Sbjct: 515 QVVIEVIGAEITLSPLHTCCLGAVRPGVGLAVRFPRFTGRYRSDKSPEQATTVAEMLELY 574
Query: 94 KKSKE 98
K+ K+
Sbjct: 575 KRQKK 579
>gi|444730652|gb|ELW71027.1| DNA ligase 1 [Tupaia chinensis]
Length = 960
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 8/59 (13%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKK 95
VWE+ A+ S + I+ A GIS+RFPR ++R DK + AT E+ L+ K
Sbjct: 882 VWEVKCADLSLSPIYPAARGLVDSEKGISLRFPRFIRVRYDKRLEEATTSAEVASLYLK 940
>gi|21227997|ref|NP_633919.1| ATP-dependent DNA ligase [Methanosarcina mazei Go1]
gi|74524266|sp|Q8PVR7.1|DNLI1_METMA RecName: Full=DNA ligase 1; AltName: Full=Polydeoxyribonucleotide
synthase [ATP] 1
gi|20906425|gb|AAM31591.1| ATP-dependent DNA ligase [Methanosarcina mazei Go1]
Length = 579
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 21/29 (72%)
Query: 9 SEIKYDGERVQVHKKGNEFKYFSRSLKPV 37
+E KYDGERVQVHK G K FSR L+ +
Sbjct: 243 AEEKYDGERVQVHKTGEGIKAFSRRLEDI 271
>gi|452210460|ref|YP_007490574.1| ATP-dependent DNA ligase [Methanosarcina mazei Tuc01]
gi|452100362|gb|AGF97302.1| ATP-dependent DNA ligase [Methanosarcina mazei Tuc01]
Length = 579
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 21/29 (72%)
Query: 9 SEIKYDGERVQVHKKGNEFKYFSRSLKPV 37
+E KYDGERVQVHK G K FSR L+ +
Sbjct: 243 AEEKYDGERVQVHKTGEGIKAFSRRLEDI 271
>gi|50289929|ref|XP_447396.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526706|emb|CAG60333.1| unnamed protein product [Candida glabrata]
Length = 724
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 6/62 (9%)
Query: 30 FSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD------GISIRFPRVTKIRDDKDWKTA 83
F S +P + + ++E+ A+ S + I+ A GIS+RFPR +IRDDK + A
Sbjct: 647 FDSSAEPDVWFEPTMLFEVLTADLSLSPIYKAGSSVYDKGISLRFPRFLRIRDDKSVEDA 706
Query: 84 TN 85
T+
Sbjct: 707 TS 708
>gi|18029886|gb|AAL56554.1|AF393656_1 DNA ligase IV [Xenopus laevis]
Length = 911
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 45 VWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELK 90
+ +I AE ++++ G ++RFPR+ KIR+DK+W L +L+
Sbjct: 561 ILQIKAAEIVSSDMYKT-GCTLRFPRIEKIREDKEWHECMTLDDLE 605
Score = 38.1 bits (87), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 21/26 (80%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRS 33
+ E K DGER+Q+HK G+ +KYFSR+
Sbjct: 274 FIETKLDGERMQMHKDGDVYKYFSRN 299
>gi|297618723|ref|YP_003706828.1| DNA ligase I, ATP-dependent Dnl1 [Methanococcus voltae A3]
gi|297377700|gb|ADI35855.1| DNA ligase I, ATP-dependent Dnl1 [Methanococcus voltae A3]
Length = 597
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQ 55
E KYDG RVQ+HK G+ K +SR L+ + + V E+ + +Q
Sbjct: 266 ETKYDGARVQIHKNGDNVKIYSRRLEDITNSIPEIVEEVKKIDCNQ 311
>gi|392311674|pdb|3VNN|A Chain A, Crystal Structure Of A Sub-Domain Of The
Nucleotidyltransferase (Adenylation) Domain Of Human
Dna Ligase Iv
Length = 139
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 16/26 (61%), Positives = 21/26 (80%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRS 33
Y E K DGER+Q+HK G+ +KYFSR+
Sbjct: 2 YIETKLDGERMQMHKDGDVYKYFSRN 27
>gi|76802375|ref|YP_327383.1| DNA ligase (ATP) [Natronomonas pharaonis DSM 2160]
gi|121729332|sp|Q3IPX0.1|DNLI_NATPD RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|76558240|emb|CAI49828.1| DNA ligase (ATP) [Natronomonas pharaonis DSM 2160]
Length = 548
Score = 38.9 bits (89), Expect = 0.42, Method: Composition-based stats.
Identities = 17/30 (56%), Positives = 21/30 (70%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSRSLKPVLE 39
E KYDG RVQVH G+ + FSR+L+ V E
Sbjct: 252 ETKYDGARVQVHYDGDSARLFSRNLEEVTE 281
>gi|254465207|ref|ZP_05078618.1| ATP dependent DNA ligase [Rhodobacterales bacterium Y4I]
gi|206686115|gb|EDZ46597.1| ATP dependent DNA ligase [Rhodobacterales bacterium Y4I]
Length = 518
Score = 38.9 bits (89), Expect = 0.42, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 36 PVLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELK 90
PV K + V E++ +Q+ H + G+++RFPR+ +IR DK A L ELK
Sbjct: 462 PVRAVKPELVLEVAFEGLNQSSRHKS-GLAMRFPRINRIRTDKPASEAGTLDELK 515
>gi|323359349|ref|YP_004225745.1| ATP-dependent DNA ligase [Microbacterium testaceum StLB037]
gi|323275720|dbj|BAJ75865.1| ATP-dependent DNA ligase [Microbacterium testaceum StLB037]
Length = 527
Score = 38.9 bits (89), Expect = 0.42, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 6 RCYSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEIS 49
R E K DG RVQVH+ G+E + F+R+L V H+ + E++
Sbjct: 205 RASVEYKLDGARVQVHRHGDEVRVFTRTLADV-THRVPEIVEVA 247
>gi|224487995|sp|A0RWD6.2|DNLI_CENSY RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
Length = 589
Score = 38.9 bits (89), Expect = 0.44, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 9 SEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTADGISI 66
+E K DGERVQVH G + FSRSL+ + + V I G ++ + A+ +++
Sbjct: 249 AEYKLDGERVQVHLSGGRVELFSRSLENITAYYPDIVERIPGRLRAREAVLEAEAVAV 306
>gi|305662687|ref|YP_003858975.1| ATP-dependent DNA ligase I [Ignisphaera aggregans DSM 17230]
gi|304377256|gb|ADM27095.1| DNA ligase I, ATP-dependent Dnl1 [Ignisphaera aggregans DSM 17230]
Length = 604
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 21/31 (67%)
Query: 7 CYSEIKYDGERVQVHKKGNEFKYFSRSLKPV 37
+E KYDGER Q+HKKG+ FSR L+ +
Sbjct: 257 ALAEFKYDGERAQIHKKGDRIWIFSRRLEEI 287
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 9/68 (13%)
Query: 45 VWEISGAEFSQAEIHT--------ADGISIRFPRVTKIRDDKDWKTATNLPE-LKVLFKK 95
V E++GAE + + +HT GISIRFPR + R DK K T E L++ +++
Sbjct: 530 VMEVTGAELTLSPLHTCCRGMVKQGVGISIRFPRFVRWRPDKSPKEITTTKEILEMYYRQ 589
Query: 96 SKETSDFT 103
++ S T
Sbjct: 590 LRKVSQTT 597
>gi|219121358|ref|XP_002185904.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209582753|gb|ACI65374.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 651
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 9/53 (16%)
Query: 42 AQPVWEISGAEFSQAEIHTAD---------GISIRFPRVTKIRDDKDWKTATN 85
A VWEI A+ S++ H GI +RFPR +IRDDK + AT
Sbjct: 573 AVQVWEIKAADLSKSSTHRGAEGKTGEEGRGIGLRFPRFERIRDDKRPEEATT 625
>gi|400601191|gb|EJP68834.1| DNA ligase I [Beauveria bassiana ARSEF 2860]
Length = 856
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 18/92 (19%)
Query: 20 VHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD-----------GISIRF 68
H GN+ + P + + Q VWE+ A+ + + + A GIS+RF
Sbjct: 759 AHSAGNQHQ-------PDVWFEPQHVWEVKTADLTLSPRYKAGCKEGVDPAGGKGISLRF 811
Query: 69 PRVTKIRDDKDWKTATNLPELKVLFKKSKETS 100
PR KIRDDK AT+ ++ +++K + +
Sbjct: 812 PRFIKIRDDKKPDEATSSRQVAEMYRKQESVT 843
>gi|308474518|ref|XP_003099480.1| CRE-LIG-4 protein [Caenorhabditis remanei]
gi|308266669|gb|EFP10622.1| CRE-LIG-4 protein [Caenorhabditis remanei]
Length = 754
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 23/26 (88%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRS 33
+ ++K+DGE V +HKKGNE+++F+R+
Sbjct: 267 FLQVKFDGENVLLHKKGNEYRWFTRN 292
>gi|325090439|gb|EGC43749.1| DNA ligase [Ajellomyces capsulatus H88]
Length = 844
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 8/69 (11%)
Query: 35 KPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNL 86
+P + + Q VWE++ A+ + + +TA G+S+RFPR K+R+DK A++
Sbjct: 748 EPEVWFEPQEVWEVAFADITLSPTYTAAIGLVSEDRGLSLRFPRFIKVREDKGIDEASSS 807
Query: 87 PELKVLFKK 95
L L++K
Sbjct: 808 EYLASLWRK 816
>gi|240278640|gb|EER42146.1| DNA ligase [Ajellomyces capsulatus H143]
Length = 844
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 8/69 (11%)
Query: 35 KPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNL 86
+P + + Q VWE++ A+ + + +TA G+S+RFPR K+R+DK A++
Sbjct: 748 EPEVWFEPQEVWEVAFADITLSPTYTAAIGLVSEDRGLSLRFPRFIKVREDKGIDEASSS 807
Query: 87 PELKVLFKK 95
L L++K
Sbjct: 808 EYLASLWRK 816
>gi|225555868|gb|EEH04158.1| DNA ligase [Ajellomyces capsulatus G186AR]
Length = 844
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 8/69 (11%)
Query: 35 KPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNL 86
+P + + Q VWE++ A+ + + +TA G+S+RFPR K+R+DK A++
Sbjct: 748 EPEVWFEPQEVWEVAFADITLSPTYTAAIGLVSEDRGLSLRFPRFIKVREDKGIDEASSS 807
Query: 87 PELKVLFKK 95
L L++K
Sbjct: 808 EYLASLWRK 816
>gi|149245640|ref|XP_001527297.1| DNA ligase I, mitochondrial precursor [Lodderomyces elongisporus
NRRL YB-4239]
gi|146449691|gb|EDK43947.1| DNA ligase I, mitochondrial precursor [Lodderomyces elongisporus
NRRL YB-4239]
Length = 786
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 6/57 (10%)
Query: 45 VWEISGAEFSQAEIHTA------DGISIRFPRVTKIRDDKDWKTATNLPELKVLFKK 95
++E+ A+ S + I+ A GIS+RFPR ++RDDKD + AT+ ++ +++
Sbjct: 725 LFEVLTADLSLSPIYKAAHSEYGKGISLRFPRFLRLRDDKDIEDATSSTQVSEFYQR 781
>gi|162455139|ref|YP_001617506.1| ATP-dependent DNA ligase [Sorangium cellulosum So ce56]
gi|224487909|sp|A9GU24.1|DNLI_SORC5 RecName: Full=Probable DNA ligase; AltName:
Full=Polydeoxyribonucleotide synthase [ATP]
gi|161165721|emb|CAN97026.1| DNA ligase [Sorangium cellulosum So ce56]
Length = 533
Score = 38.5 bits (88), Expect = 0.46, Method: Composition-based stats.
Identities = 20/35 (57%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQP 44
E K DG RVQ HK G+E + FSR L PV KA P
Sbjct: 211 EWKLDGVRVQAHKAGDEVRVFSRGLGPVT--KAVP 243
>gi|156615336|ref|XP_001647535.1| predicted protein [Nematostella vectensis]
gi|156214768|gb|EDO35746.1| predicted protein [Nematostella vectensis]
Length = 907
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 1 MAKNERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
+ KN+ Y E K DGER +HK G++++YFSR
Sbjct: 262 LMKNQPFYIETKMDGERFILHKDGDKYRYFSRG 294
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 45 VWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKSK 97
V +I AE + +E + A G ++RFPR+ +R DK W +L L+ L KK++
Sbjct: 553 VVQIKAAEITPSEKYRA-GFTLRFPRLECVRHDKSWYDCLDLSGLEQLLKKAE 604
>gi|150401292|ref|YP_001325058.1| ATP-dependent DNA ligase I [Methanococcus aeolicus Nankai-3]
gi|224487887|sp|A6UVC4.1|DNLI_META3 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|150013995|gb|ABR56446.1| DNA ligase I, ATP-dependent Dnl1 [Methanococcus aeolicus Nankai-3]
Length = 562
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 25/43 (58%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAE 52
E KYDG RVQ+HKK N K +SR L+ + + V E+ E
Sbjct: 252 ETKYDGARVQIHKKDNIVKIYSRKLEDITNSIPEIVEEVKNIE 294
>gi|15897140|ref|NP_341745.1| ATP-dependent DNA ligase [Sulfolobus solfataricus P2]
gi|284174384|ref|ZP_06388353.1| ATP-dependent DNA ligase [Sulfolobus solfataricus 98/2]
gi|384433651|ref|YP_005643009.1| ATP-dependent DNA ligase I [Sulfolobus solfataricus 98/2]
gi|20137903|sp|Q980T8.1|DNLI_SULSO RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|13813323|gb|AAK40535.1| DNA ligase (polydeoxyribonucleotide synthase (ATP)) (lig)
[Sulfolobus solfataricus P2]
gi|261601805|gb|ACX91408.1| DNA ligase I, ATP-dependent Dnl1 [Sulfolobus solfataricus 98/2]
Length = 601
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 10/64 (15%)
Query: 42 AQPVW--EISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDWKTATNLPELKV 91
+PV+ EI G+E + + +HT G+SIRFPR + RDDK + AT E+
Sbjct: 523 VEPVYVAEIIGSEITISPLHTCCQDVVEKDAGLSIRFPRFIRWRDDKSPEDATTTDEILE 582
Query: 92 LFKK 95
++ K
Sbjct: 583 MYNK 586
>gi|361132047|gb|EHL03662.1| putative DNA ligase 4 [Glarea lozoyensis 74030]
Length = 906
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Query: 45 VWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKSKETSD--- 101
V E+ A +E + ++RFPR K+R+DKDW++A +L E +L K + S
Sbjct: 545 VLEVKAASVGPSESFKTN-YTLRFPRFKKLREDKDWQSALSLSEFALLKTKVEAESSQRG 603
Query: 102 FTLKPKYDRIKNLK 115
F ++ K K LK
Sbjct: 604 FVVQAKRKMTKRLK 617
>gi|66801093|ref|XP_629472.1| DNA ligase IV [Dictyostelium discoideum AX4]
gi|74850906|sp|Q54CR9.1|DNL4_DICDI RecName: Full=DNA ligase 4; AltName: Full=DNA ligase IV; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 4
gi|60462855|gb|EAL61054.1| DNA ligase IV [Dictyostelium discoideum AX4]
Length = 1088
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 15/24 (62%), Positives = 20/24 (83%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSRS 33
E K+DGER+Q+HK G + KYFSR+
Sbjct: 414 EKKFDGERIQIHKDGEQVKYFSRN 437
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%)
Query: 63 GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKSKETSDF 102
G ++RFPRV KIRDDK WK + E+ LF +F
Sbjct: 739 GYTLRFPRVLKIRDDKGWKDCCSHEEIIDLFTNYSTNLNF 778
>gi|367011607|ref|XP_003680304.1| hypothetical protein TDEL_0C02040 [Torulaspora delbrueckii]
gi|359747963|emb|CCE91093.1| hypothetical protein TDEL_0C02040 [Torulaspora delbrueckii]
Length = 705
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 40/71 (56%), Gaps = 6/71 (8%)
Query: 30 FSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD------GISIRFPRVTKIRDDKDWKTA 83
F S +P + + ++E+ A+ S + ++ A G+S+RFPR ++RDDK + A
Sbjct: 629 FDSSAEPDVWFEPTTLFEVLTADLSLSPVYKAGASTYDKGVSLRFPRFVRLRDDKSVEDA 688
Query: 84 TNLPELKVLFK 94
T+ ++ L++
Sbjct: 689 TSSAQIVELYQ 699
>gi|341900680|gb|EGT56615.1| hypothetical protein CAEBREN_22520 [Caenorhabditis brenneri]
Length = 750
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 23/26 (88%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRS 33
+ ++K+DGE V +HKKGNE+++F+R+
Sbjct: 262 FLQVKFDGENVLLHKKGNEYRWFTRN 287
>gi|209489259|gb|ACI49038.1| hypothetical protein Cbre_JD07.005 [Caenorhabditis brenneri]
Length = 703
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 23/26 (88%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRS 33
+ ++K+DGE V +HKKGNE+++F+R+
Sbjct: 215 FLQVKFDGENVLLHKKGNEYRWFTRN 240
>gi|294654642|ref|XP_456702.2| DEHA2A08602p [Debaryomyces hansenii CBS767]
gi|199429037|emb|CAG84658.2| DEHA2A08602p [Debaryomyces hansenii CBS767]
Length = 749
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 6/57 (10%)
Query: 45 VWEISGAEFSQAEIHTA------DGISIRFPRVTKIRDDKDWKTATNLPELKVLFKK 95
++E+ A+ S + I+ A GIS+RFPR +IRDDK + AT+ E+ +++
Sbjct: 688 IFEVLTADLSLSPIYKAAHQQYGKGISLRFPRFLRIRDDKGTEDATSSTEVSEFYER 744
>gi|118576214|ref|YP_875957.1| ATP-dependent DNA ligase [Cenarchaeum symbiosum A]
gi|118194735|gb|ABK77653.1| ATP-dependent DNA ligase [Cenarchaeum symbiosum A]
Length = 577
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 9 SEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTADGISI 66
+E K DGERVQVH G + FSRSL+ + + V I G ++ + A+ +++
Sbjct: 237 AEYKLDGERVQVHLSGGRVELFSRSLENITAYYPDIVERIPGRLRAREAVLEAEAVAV 294
>gi|119389897|pdb|2HIV|A Chain A, Atp-Dependent Dna Ligase From S. Solfataricus
gi|119389898|pdb|2HIX|A Chain A, Atp Dependent Dna Ligase From S. Solfataricus Bound To Atp
Length = 621
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 10/64 (15%)
Query: 42 AQPVW--EISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDWKTATNLPELKV 91
+PV+ EI G+E + + +HT G+SIRFPR + RDDK + AT E+
Sbjct: 543 VEPVYVAEIIGSEITISPLHTCCQDVVEKDAGLSIRFPRFIRWRDDKSPEDATTTDEILE 602
Query: 92 LFKK 95
++ K
Sbjct: 603 MYNK 606
>gi|425767386|gb|EKV05960.1| DNA ligase [Penicillium digitatum PHI26]
gi|425779691|gb|EKV17728.1| DNA ligase [Penicillium digitatum Pd1]
Length = 835
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
VWE++ A+ + + + A G+S+RFPR K+R+DK AT+ L +L++K
Sbjct: 752 VWEMAFADITLSPTYPAAIGLVSDERGLSLRFPRFVKVREDKSIDEATSSDYLALLWRKQ 811
Query: 97 KE 98
E
Sbjct: 812 ME 813
>gi|156739291|ref|NP_001096593.1| DNA ligase 4 [Danio rerio]
gi|152012596|gb|AAI50237.1| Zgc:165595 protein [Danio rerio]
Length = 909
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 38 LEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPEL 89
+E + + ++ AE +E++ D ++RFPR+ +IR+DK+W L +L
Sbjct: 554 IEPRNSVILQVKAAEIVTSEMYKTD-CTLRFPRIERIREDKEWHQCMTLDDL 604
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 22/30 (73%)
Query: 4 NERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
N Y E K DGER+Q+HK G+ +KY++R+
Sbjct: 270 NRPFYIETKLDGERIQLHKAGDVYKYYTRN 299
>gi|341899425|gb|EGT55360.1| hypothetical protein CAEBREN_25255 [Caenorhabditis brenneri]
Length = 777
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 8/80 (10%)
Query: 30 FSRSLKPVLEHKAQPVWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDWK 81
F +LKP V+E+ A+ + + H A GIS+RFPR +IRDDK+ +
Sbjct: 547 FDPTLKPDDIFSPHLVFEVKCADITISPRHKAASGLTEDGKGISLRFPRFLRIRDDKNPE 606
Query: 82 TATNLPELKVLFKKSKETSD 101
AT+ ++ ++K + +++
Sbjct: 607 DATSSEQVLEMYKNQESSAN 626
>gi|340713799|ref|XP_003395423.1| PREDICTED: DNA ligase 4-like [Bombus terrestris]
Length = 897
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 23/41 (56%)
Query: 63 GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKSKETSDFT 103
G S+RFPRVT +R+DK W LK+L K ++ T
Sbjct: 562 GYSLRFPRVTSVREDKPWYDVCTTDNLKLLIKDTQPIQKLT 602
Score = 35.0 bits (79), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 19/25 (76%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSR 32
+ + KYDGER Q+H K ++KYF+R
Sbjct: 259 FVQCKYDGERSQIHMKDGKYKYFTR 283
>gi|225874214|ref|YP_002755673.1| DNA ligase, ATP-dependent [Acidobacterium capsulatum ATCC 51196]
gi|225793244|gb|ACO33334.1| DNA ligase, ATP-dependent [Acidobacterium capsulatum ATCC 51196]
Length = 540
Score = 38.5 bits (88), Expect = 0.50, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 8/73 (10%)
Query: 26 EFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATN 85
+F +F RS++P+L V E++ ++E H + G ++RFPR+ +IRDDK +
Sbjct: 471 DFGHF-RSVEPLL------VLEVAFNNIQRSERHNS-GFALRFPRIVRIRDDKPVEEIDT 522
Query: 86 LPELKVLFKKSKE 98
L ++ L++ +
Sbjct: 523 LARVEELYQSQPD 535
>gi|341899398|gb|EGT55333.1| hypothetical protein CAEBREN_01380 [Caenorhabditis brenneri]
Length = 777
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 8/80 (10%)
Query: 30 FSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWK 81
F +LKP V+E+ A+ + + H A GIS+RFPR +IRDDK+ +
Sbjct: 547 FDPTLKPDDIFSPHLVFEVKCADITISPRHKAASGLTEDGRGISLRFPRFLRIRDDKNPE 606
Query: 82 TATNLPELKVLFKKSKETSD 101
AT+ ++ ++K + +++
Sbjct: 607 DATSSEQVLEMYKNQESSAN 626
>gi|323453870|gb|EGB09741.1| hypothetical protein AURANDRAFT_53245 [Aureococcus anophagefferens]
Length = 400
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 8/71 (11%)
Query: 45 VWEISGAEFSQAE--------IHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
VWEI GA+ S + +H + GIS+RFPR + R DK + A EL ++
Sbjct: 319 VWEIRGADLSISPTHRAAVGLVHESRGISLRFPRFIRERPDKTVEMACTPGELAAKYRDQ 378
Query: 97 KETSDFTLKPK 107
+ P+
Sbjct: 379 NQGQGGGAGPR 389
>gi|156937733|ref|YP_001435529.1| ATP-dependent DNA ligase [Ignicoccus hospitalis KIN4/I]
gi|166215371|sp|A8AB20.1|DNLI_IGNH4 RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|156566717|gb|ABU82122.1| DNA ligase I, ATP-dependent Dnl1 [Ignicoccus hospitalis KIN4/I]
Length = 594
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 8/70 (11%)
Query: 33 SLKPVLEHKAQPVWEISGAEFSQAEIHT--------ADGISIRFPRVTKIRDDKDWKTAT 84
++KP + + V EI GAE + + IHT G++IRFPR + R DK + AT
Sbjct: 515 NVKPDVWVRPALVAEIIGAEITLSPIHTCAKDEVSAGSGLAIRFPRFIRWRPDKGPEDAT 574
Query: 85 NLPELKVLFK 94
E+ ++K
Sbjct: 575 TCGEIVEMYK 584
>gi|346979093|gb|EGY22545.1| DNA ligase [Verticillium dahliae VdLs.17]
Length = 813
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 8/69 (11%)
Query: 35 KPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNL 86
+P + + Q VWE++ A+ + + +TA G+S+RFPR K RDDK A+
Sbjct: 729 EPDVWFEPQEVWEMAFADVTLSPTYTAAIGLVSEERGLSLRFPRFLKKRDDKGLDEASTN 788
Query: 87 PELKVLFKK 95
L LF+K
Sbjct: 789 EFLASLFRK 797
>gi|126337295|ref|XP_001365353.1| PREDICTED: DNA ligase 4 [Monodelphis domestica]
Length = 911
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 3 KNERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
K++ Y E K DGER+Q+HK G+ +K+FSR+
Sbjct: 264 KHQGFYIETKLDGERMQMHKDGDVYKFFSRN 294
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 45 VWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
+ ++ AE ++++ + ++RFPR+ KIR+DK+W L EL+ L K+
Sbjct: 556 IVQVKAAEIVSSDMYKTN-CTLRFPRIEKIREDKEWYKCMTLDELENLRGKA 606
>gi|21686777|ref|NP_663277.1| DNA ligase [Phthorimaea operculella granulovirus]
gi|21637093|gb|AAM70310.1| DNA ligase [Phthorimaea operculella granulovirus]
Length = 560
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 16/86 (18%)
Query: 42 AQPVWEISGAEFSQAEIH------TADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKK 95
+ PVWE+ G +F +++ + + +SIR PR ++RDDK +K A + +L +L
Sbjct: 479 SMPVWEMEG-DFIRSKYYWQHNNICHNYVSIRLPRFIRVRDDKSFKDANTIFDLILLSSI 537
Query: 96 SK------ETSDFTLKPKYDRIKNLK 115
+ E +F LK + IKNL+
Sbjct: 538 TNKSYLYPELYEFFLK---ENIKNLE 560
>gi|404260553|ref|ZP_10963835.1| ATP-dependent DNA ligase LigB [Gordonia namibiensis NBRC 108229]
gi|403400942|dbj|GAC02245.1| ATP-dependent DNA ligase LigB [Gordonia namibiensis NBRC 108229]
Length = 505
Score = 38.5 bits (88), Expect = 0.55, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 28/44 (63%)
Query: 7 CYSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISG 50
C + K DG R+QVH+KG++ ++R+L+ V ++ V I+G
Sbjct: 206 CVVDYKLDGARIQVHRKGSDISVYTRTLRDVTDNVPDLVEVIAG 249
>gi|336374245|gb|EGO02582.1| hypothetical protein SERLA73DRAFT_175993 [Serpula lacrymans var.
lacrymans S7.3]
gi|336387155|gb|EGO28300.1| hypothetical protein SERLADRAFT_458691 [Serpula lacrymans var.
lacrymans S7.9]
Length = 727
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 35/58 (60%), Gaps = 7/58 (12%)
Query: 45 VWEISGAEFSQAEIHTAD-------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKK 95
VWE+ A+ S + I+TA GIS+RFPR + R+DK + +T+ ++ ++++
Sbjct: 651 VWEVLTADLSLSPIYTAAQGLIEERGISLRFPRFIRPREDKSAEDSTSPEQIAEMYQR 708
>gi|325110162|ref|YP_004271230.1| ATP dependent DNA ligase [Planctomyces brasiliensis DSM 5305]
gi|324970430|gb|ADY61208.1| ATP dependent DNA ligase [Planctomyces brasiliensis DSM 5305]
Length = 546
Score = 38.5 bits (88), Expect = 0.55, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 36 PVLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKK 95
PV KA+ V+E++ ++ H + G+++RFPR+ + R DK + A L ELK +
Sbjct: 472 PVRSVKAELVFELAFENIQESTRHKS-GVAVRFPRIHRWRQDKPPEQANTLQELKAMMPA 530
Query: 96 SK 97
+
Sbjct: 531 QR 532
>gi|148235991|ref|NP_001081114.1| DNA ligase (ATP) 4 [Xenopus laevis]
gi|49256305|gb|AAH74385.1| Lig4-A protein [Xenopus laevis]
Length = 911
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 45 VWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELK 90
+ +I AE ++++ G ++RFPR+ KIR+DK+W L +L+
Sbjct: 561 ILQIKAAEIVSSDMYKT-GCTLRFPRIEKIREDKEWYECMTLDDLE 605
Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 21/26 (80%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRS 33
+ E K DGER+Q+HK G+ +KYFSR+
Sbjct: 274 FIETKLDGERMQMHKDGDVYKYFSRN 299
>gi|71985269|ref|NP_741625.2| Protein LIG-1, isoform a [Caenorhabditis elegans]
gi|66774195|sp|Q27474.2|DNL1_CAEEL RecName: Full=DNA ligase 1; AltName: Full=DNA ligase I; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 1
gi|54110912|emb|CAA98242.2| Protein LIG-1, isoform a [Caenorhabditis elegans]
Length = 773
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 8/73 (10%)
Query: 30 FSRSLKPVLEHKAQPVWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDWK 81
F +LKP V+E+ A+ + + H A GIS+RFPR +IRDDK+
Sbjct: 545 FDHTLKPDDTFSPYLVFEVKCADITISPRHKAASGLTDDGKGISLRFPRFLRIRDDKNSD 604
Query: 82 TATNLPELKVLFK 94
AT+ ++ ++K
Sbjct: 605 DATSSEQVLEMYK 617
>gi|302915439|ref|XP_003051530.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256732469|gb|EEU45817.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 878
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Query: 35 KPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNL 86
+P + + Q VWE++ A+ + + +TA G+S+RFPR K R+DK + A+
Sbjct: 784 RPDVWFEPQEVWEMAFADITLSPTYTAAIGLVSEERGLSLRFPRFLKKREDKSLEEASTN 843
Query: 87 PELKVLFKKSKETSDFT 103
L LF+K + + T
Sbjct: 844 DVLAGLFRKQEAKASST 860
>gi|384491447|gb|EIE82643.1| hypothetical protein RO3G_07348 [Rhizopus delemar RA 99-880]
Length = 726
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 8/49 (16%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATN 85
VWE+ A+ S + + A GIS+RFPR ++RDDK + AT+
Sbjct: 654 VWEVKCADLSLSPTYMAGIGKVDETKGISLRFPRFIRVRDDKQPEDATS 702
>gi|440470362|gb|ELQ39435.1| ATP-dependent DNA ligase domain-containing protein [Magnaporthe
oryzae Y34]
gi|440476927|gb|ELQ58085.1| ATP-dependent DNA ligase domain-containing protein [Magnaporthe
oryzae P131]
Length = 970
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 29 YFSRSL----KPVLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTAT 84
+F R + +P + PV+++ F++ E + A ++RFP V+KI D+ W+ A
Sbjct: 565 HFERGIDNGKRPSIIFPEPPVFDLRCFSFTR-EANLAKHYTMRFPMVSKIHCDRTWRDAV 623
Query: 85 NLPELKVLFKKSKETS 100
+L EL+ + KK +S
Sbjct: 624 SLDELQEMAKKELNSS 639
>gi|255724178|ref|XP_002547018.1| ATP-dependent DNA ligase [Candida tropicalis MYA-3404]
gi|240134909|gb|EER34463.1| ATP-dependent DNA ligase [Candida tropicalis MYA-3404]
Length = 937
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 1 MAKNERCYSEIKYDGERVQVHKKGNEFKYFSRSLK 35
M ++ Y E K DG+R+ +HK G+ FK+FSR LK
Sbjct: 302 MDLQDKFYIEEKMDGDRMLLHKDGDSFKFFSRKLK 336
>gi|209489416|gb|ACI49178.1| hypothetical protein Csp3_JD02.006 [Caenorhabditis angaria]
Length = 683
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 23/26 (88%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRS 33
+ +IK+DGE V +HKKGN++++FSR+
Sbjct: 198 FLQIKFDGENVLLHKKGNKYRWFSRN 223
>gi|407982111|ref|ZP_11162794.1| DNA ligase I, ATP-dependent family protein [Mycobacterium hassiacum
DSM 44199]
gi|407376281|gb|EKF25214.1| DNA ligase I, ATP-dependent family protein [Mycobacterium hassiacum
DSM 44199]
Length = 519
Score = 38.5 bits (88), Expect = 0.59, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTADGISIR 67
E K DG RVQ+H+ G E F+RSL V H+ V E + A I A+ I++R
Sbjct: 211 EAKLDGARVQIHRSGREVAVFTRSLDDV-THRLPEVVEAALALPVDELIADAEAIALR 267
>gi|389626133|ref|XP_003710720.1| ATP-dependent DNA ligase domain-containing protein [Magnaporthe
oryzae 70-15]
gi|351650249|gb|EHA58108.1| ATP-dependent DNA ligase domain-containing protein [Magnaporthe
oryzae 70-15]
Length = 970
Score = 38.5 bits (88), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 29 YFSRSL----KPVLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTAT 84
+F R + +P + PV+++ F++ E + A ++RFP V+KI D+ W+ A
Sbjct: 565 HFERGIDNGKRPSIIFPEPPVFDLRCFSFTR-EANLAKHYTMRFPMVSKIHCDRTWRDAV 623
Query: 85 NLPELKVLFKKSKETS 100
+L EL+ + KK +S
Sbjct: 624 SLDELQEMAKKELNSS 639
>gi|448678349|ref|ZP_21689356.1| DNA ligase [Haloarcula argentinensis DSM 12282]
gi|445772336|gb|EMA23381.1| DNA ligase [Haloarcula argentinensis DSM 12282]
Length = 554
Score = 38.5 bits (88), Expect = 0.59, Method: Composition-based stats.
Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 20/126 (15%)
Query: 5 ERCYSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQA----EIHT 60
+R E KYDG RVQVH G + + FSR+++ V + + V + A + A E+
Sbjct: 248 DRAAVEWKYDGARVQVHFDGEDARLFSRNMEEVTDPLPEVVDTVESALDAPAILDGEVVA 307
Query: 61 ADG---------ISIRFPR---VTKIRDDKDWKTATNLPELKVLFKKSKETSDFTLKPKY 108
D + RF R V R+D A L L ++ D +L+ ++
Sbjct: 308 VDTDGDPLPFQEVLRRFRRKHDVAAARED----VAVRLHAFDCLHAAGEDLLDASLETRH 363
Query: 109 DRIKNL 114
DR+++L
Sbjct: 364 DRLESL 369
>gi|154278200|gb|ABS72370.1| DNA ligase [Sulfophobococcus zilligii]
Length = 606
Score = 38.5 bits (88), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 8/59 (13%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKK 95
V EI GAE + + IHT GISIRFPR + R DK + AT EL ++++
Sbjct: 533 VAEIIGAELTLSPIHTCAKGVIKPDAGISIRFPRFIRWRPDKRPEDATTSSELVEMYQR 591
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 7 CYSEIKYDGERVQVHKKGNEFKYFSRSLKPV 37
+ E KYDGER Q+HKKG++ +SR L+ +
Sbjct: 260 AFVEYKYDGERAQIHKKGDKIWIYSRRLENI 290
>gi|255573570|ref|XP_002527709.1| DNA ligase IV, putative [Ricinus communis]
gi|223532899|gb|EEF34668.1| DNA ligase IV, putative [Ricinus communis]
Length = 850
Score = 38.5 bits (88), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%), Gaps = 3/31 (9%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSRSLKPVLEH 40
E K+DG+R+Q+HK G E YFSR+ L+H
Sbjct: 251 ECKFDGDRIQIHKNGAEIHYFSRNF---LDH 278
>gi|398389689|ref|XP_003848305.1| hypothetical protein MYCGRDRAFT_101535 [Zymoseptoria tritici
IPO323]
gi|339468180|gb|EGP83281.1| hypothetical protein MYCGRDRAFT_101535 [Zymoseptoria tritici
IPO323]
Length = 854
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 8/75 (10%)
Query: 29 YFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDW 80
Y + +P + + Q VWE+ A+ + + +TA G+S+RFPR K+R+DK
Sbjct: 762 YVDYAGEPDVWFEPQEVWEMVFADITLSPTYTAAIGLVSEERGLSLRFPRFLKVREDKSI 821
Query: 81 KTATNLPELKVLFKK 95
+ A+ L L++K
Sbjct: 822 EEASTSDFLASLYRK 836
>gi|15920405|ref|NP_376074.1| ATP-dependent DNA ligase [Sulfolobus tokodaii str. 7]
gi|20137895|sp|Q976G4.1|DNLI_SULTO RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|15621187|dbj|BAB65183.1| DNA ligase [Sulfolobus tokodaii str. 7]
Length = 600
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 14/95 (14%)
Query: 14 DGERVQVHKKGNEFKY------FSRSLKPVLEHKAQPVWEISGAEFSQAEIHT------- 60
D E ++ KK E K L+P + + + V EI GAE + + HT
Sbjct: 491 DAELDELQKKLMEIKLDKKDPRVDSQLEPDIWVEPKYVAEIIGAEITLSPEHTCCKDMVS 550
Query: 61 -ADGISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
G+S+RFPR + RDDK + AT E+ ++K
Sbjct: 551 KGAGLSVRFPRFIRWRDDKSIEDATTPKEIYEMYK 585
Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 18/26 (69%)
Query: 12 KYDGERVQVHKKGNEFKYFSRSLKPV 37
KYDGER Q+HKK E FSR L+ +
Sbjct: 260 KYDGERAQIHKKDKEVYIFSRRLENI 285
>gi|397779791|ref|YP_006544264.1| DNA ligase 1 [Methanoculleus bourgensis MS2]
gi|396938293|emb|CCJ35548.1| DNA ligase 1 [Methanoculleus bourgensis MS2]
Length = 582
Score = 38.1 bits (87), Expect = 0.61, Method: Composition-based stats.
Identities = 17/28 (60%), Positives = 19/28 (67%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSRSLKPV 37
E KYDGERVQ HK G++ FSR L V
Sbjct: 249 EEKYDGERVQAHKDGDDVTLFSRRLTDV 276
Score = 34.7 bits (78), Expect = 7.7, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 36/61 (59%), Gaps = 7/61 (11%)
Query: 45 VWEISGAEFSQAEIHTAD-------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKSK 97
V E+ G E +++ +HT + G+++RFPR + RD+K + AT E+ +F++ +
Sbjct: 521 VVEVLGLEITESPVHTCNWDPEWRRGLALRFPRFVRWRDEKSPEAATTTAEVAAMFRRRR 580
Query: 98 E 98
E
Sbjct: 581 E 581
>gi|357472117|ref|XP_003606343.1| DNA ligase [Medicago truncatula]
gi|355507398|gb|AES88540.1| DNA ligase [Medicago truncatula]
Length = 149
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 44/89 (49%), Gaps = 8/89 (8%)
Query: 17 RVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFS--------QAEIHTADGISIRF 68
R +V K + S+ P + +A VWE+ A+ + + ++ + GIS+RF
Sbjct: 48 RSKVIPKPKAYYSCGESINPDVWLEASEVWEVKAADLTISPVYRAAEGKVDSVKGISLRF 107
Query: 69 PRVTKIRDDKDWKTATNLPELKVLFKKSK 97
PR ++R DK + +++ ++ ++ K
Sbjct: 108 PRFIRVRPDKTPEQSSSSEQIAEMYNAQK 136
>gi|320100861|ref|YP_004176453.1| ATP-dependent DNA ligase I [Desulfurococcus mucosus DSM 2162]
gi|319753213|gb|ADV64971.1| DNA ligase I, ATP-dependent Dnl1 [Desulfurococcus mucosus DSM 2162]
Length = 610
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 23/34 (67%)
Query: 7 CYSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEH 40
+ E KYDGER Q+HKKG++ FSR L+ + +
Sbjct: 264 AFIEYKYDGERAQIHKKGDKVWIFSRRLENITQQ 297
Score = 37.7 bits (86), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 8/59 (13%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKK 95
V EI GAE + + +HT GISIRFPR + R DK + AT EL ++++
Sbjct: 537 VAEIIGAELTLSPVHTCAYGKVKSDAGISIRFPRFIRWRPDKSPEDATTSNELVEMYQQ 595
>gi|406971253|gb|EKD95382.1| DNA ligase, partial [uncultured bacterium]
Length = 145
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 31 SRSLKPVLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELK 90
++SL+P + + V E+ E S++ HTA G ++RFPR+ K R DK +T++ E+
Sbjct: 76 NKSLEPDIWCHPKIVVEVGADEISKSPSHTA-GYALRFPRLIKFRTDKKPTDSTSIEEII 134
Query: 91 VLFKKSK 97
L K
Sbjct: 135 SLHNMQK 141
>gi|367001580|ref|XP_003685525.1| hypothetical protein TPHA_0D04570 [Tetrapisispora phaffii CBS 4417]
gi|357523823|emb|CCE63091.1| hypothetical protein TPHA_0D04570 [Tetrapisispora phaffii CBS 4417]
Length = 736
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 6/62 (9%)
Query: 30 FSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD------GISIRFPRVTKIRDDKDWKTA 83
+ S +P + +A+ ++E+ A+ S + ++ A GIS+RFPR +IR+DKD
Sbjct: 659 YDSSAEPDVWFQAKVLFEVLTADLSLSPVYKAGNSRYDKGISLRFPRFLRIREDKDVTDG 718
Query: 84 TN 85
T
Sbjct: 719 TT 720
>gi|354543474|emb|CCE40193.1| hypothetical protein CPAR2_102310 [Candida parapsilosis]
Length = 736
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 6/57 (10%)
Query: 45 VWEISGAEFSQAEIHTA------DGISIRFPRVTKIRDDKDWKTATNLPELKVLFKK 95
++E+ A+ S + I+ A GIS+RFPR +IRDDK + AT+ E+ +++
Sbjct: 673 LFEVLTADLSLSPIYKAAHNEYGKGISLRFPRFIRIRDDKGIEDATSSTEIAEFYER 729
>gi|307185188|gb|EFN71325.1| DNA ligase 4 [Camponotus floridanus]
Length = 891
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 4 NERCYSEIKYDGERVQVHKKGNEFKYFSR 32
N+ Y + KYDGER Q+H K +FKYF+R
Sbjct: 258 NDLYYVQTKYDGERSQLHMKDGKFKYFTR 286
>gi|428671778|gb|EKX72693.1| ATP-dependent DNA ligase domain containing protein [Babesia equi]
Length = 709
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 10/93 (10%)
Query: 11 IKYDGERVQVHKKGNEFKYFSRS--LKPVLEHKAQPVWEISGAEFSQAEIHTAD------ 62
+KY + +Q H ++ + S L+P + + VWE A+ S + ++TA
Sbjct: 610 LKYLYDTLQQHIIPSKLPTYEVSDKLEPDVWFMPEKVWECKAADLSISPVYTAANRLTAN 669
Query: 63 --GISIRFPRVTKIRDDKDWKTATNLPELKVLF 93
GI +RFPR + RDDK AT ++ +F
Sbjct: 670 GKGIGLRFPRFLRDRDDKKAIDATTSEQIHDMF 702
>gi|169806130|ref|XP_001827810.1| ATP-dependent DNA ligase [Enterocytozoon bieneusi H348]
gi|161779258|gb|EDQ31281.1| ATP-dependent DNA ligase [Enterocytozoon bieneusi H348]
Length = 628
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 8/57 (14%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNLPELKVLF 93
VWEI A + + I+ A GIS+RFPR + R DK + AT EL +F
Sbjct: 564 VWEIKAASLTLSPIYIAGSTDTISNKGISLRFPRFIRERLDKSPENATTSKELFTMF 620
>gi|297796605|ref|XP_002866187.1| ATLIG4 [Arabidopsis lyrata subsp. lyrata]
gi|297312022|gb|EFH42446.1| ATLIG4 [Arabidopsis lyrata subsp. lyrata]
Length = 1221
Score = 38.1 bits (87), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%), Gaps = 3/32 (9%)
Query: 9 SEIKYDGERVQVHKKGNEFKYFSRSLKPVLEH 40
+E K+DG+R+Q+HK G + YFSR+ L+H
Sbjct: 252 AECKFDGDRIQIHKNGTDIHYFSRNF---LDH 280
>gi|296420322|ref|XP_002839724.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295635918|emb|CAZ83915.1| unnamed protein product [Tuber melanosporum]
Length = 852
Score = 38.1 bits (87), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 9/78 (11%)
Query: 33 SLKPVLEHKAQPVWEISGAEFSQAEIHTADG---------ISIRFPRVTKIRDDKDWKTA 83
SL P + + + VWE++ A+ + + +TA G +S+RFPR + R+DK + A
Sbjct: 733 SLTPAIWFEPREVWEVAFADITVSPTYTAAGQFMEGRGKGLSLRFPRFVRRREDKGVEEA 792
Query: 84 TNLPELKVLFKKSKETSD 101
+ L LF K + S+
Sbjct: 793 STPEFLAGLFFKQERDSE 810
>gi|146416351|ref|XP_001484145.1| hypothetical protein PGUG_03526 [Meyerozyma guilliermondii ATCC
6260]
gi|146391270|gb|EDK39428.1| hypothetical protein PGUG_03526 [Meyerozyma guilliermondii ATCC
6260]
Length = 731
Score = 38.1 bits (87), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 6/57 (10%)
Query: 45 VWEISGAEFSQAEIHTA------DGISIRFPRVTKIRDDKDWKTATNLPELKVLFKK 95
V+E+ A+ S + I+ A GIS+RFPR ++RDDK + AT+ E+ +++
Sbjct: 670 VFEVLTADLSLSPIYKAAHHEYGKGISLRFPRFLRVRDDKGIEDATSSTEVAEFYER 726
>gi|126696121|ref|YP_001091007.1| ATP-dependent DNA ligase [Prochlorococcus marinus str. MIT 9301]
gi|126543164|gb|ABO17406.1| possible ATP-dependent DNA ligase [Prochlorococcus marinus str. MIT
9301]
Length = 546
Score = 38.1 bits (87), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 36 PVLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKK 95
PV K + V+EIS + + H + GI++RFPR+TK R DK K A +L L KK
Sbjct: 486 PVRSLKPEMVFEISFEKIQISNRHKS-GIAVRFPRITKWRKDKKIKDADSLENAYELMKK 544
>gi|388582574|gb|EIM22878.1| ATP-dependent DNA ligase [Wallemia sebi CBS 633.66]
Length = 1135
Score = 38.1 bits (87), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 1 MAKNERCYSEIKYDGERVQVHKKGNEFKYFSRSLK 35
M K+ E K DGER+Q+HKKG ++KY+SR+ K
Sbjct: 241 MPKSVPFVVEEKMDGERIQLHKKGTKYKYWSRNAK 275
>gi|385681219|ref|ZP_10055147.1| ATP-dependent DNA ligase [Amycolatopsis sp. ATCC 39116]
Length = 503
Score = 38.1 bits (87), Expect = 0.64, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 24/36 (66%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPV 45
E K DG R+QVH+ G+E ++R+L+ + +H + V
Sbjct: 209 EYKMDGARIQVHRDGDEVHVYTRTLREITQHVGELV 244
>gi|255936669|ref|XP_002559361.1| Pc13g09370 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583981|emb|CAP92006.1| Pc13g09370 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 833
Score = 38.1 bits (87), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
VWE++ A+ + + + A G+S+RFPR K+R+DK AT+ L +L++K
Sbjct: 754 VWEMAFADITLSPTYPAAIGLVSDERGLSLRFPRFIKVREDKSIDEATSSDYLALLWRKQ 813
Query: 97 KE 98
E
Sbjct: 814 ME 815
>gi|255954011|ref|XP_002567758.1| Pc21g07170 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589469|emb|CAP95614.1| Pc21g07170 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 990
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 63 GISIRFPRVTKIRDDKDWKTATNLPEL 89
G+++RFPR K+R DKDWKTA ++ E
Sbjct: 637 GLALRFPRFKKLRKDKDWKTALSVQEF 663
>gi|8843818|dbj|BAA97366.1| unnamed protein product [Arabidopsis thaliana]
Length = 1184
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%), Gaps = 3/32 (9%)
Query: 9 SEIKYDGERVQVHKKGNEFKYFSRSLKPVLEH 40
+E K+DG+R+Q+HK G + YFSR+ L+H
Sbjct: 250 AECKFDGDRIQIHKNGTDIHYFSRNF---LDH 278
>gi|30696835|ref|NP_568851.2| DNA ligase 4 [Arabidopsis thaliana]
gi|75174554|sp|Q9LL84.1|DNLI4_ARATH RecName: Full=DNA ligase 4; AltName: Full=DNA ligase IV; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 4
gi|9651815|gb|AAF91284.1|AF233527_1 DNA ligase IV [Arabidopsis thaliana]
gi|332009474|gb|AED96857.1| DNA ligase 4 [Arabidopsis thaliana]
Length = 1219
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%), Gaps = 3/32 (9%)
Query: 9 SEIKYDGERVQVHKKGNEFKYFSRSLKPVLEH 40
+E K+DG+R+Q+HK G + YFSR+ L+H
Sbjct: 250 AECKFDGDRIQIHKNGTDIHYFSRNF---LDH 278
>gi|225684974|gb|EEH23258.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 910
Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 35 KPVLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
+P + K V E+ G+ F ++ + ++RFPRV KI +D+D + AT L EL++L K
Sbjct: 497 EPQVLFKTPFVVEMLGSGFKRSP--GVNYFTLRFPRVLKIHNDRDVEYATTLEELQMLAK 554
Query: 95 KS 96
++
Sbjct: 555 EA 556
>gi|328848917|gb|EGF98110.1| hypothetical protein MELLADRAFT_41015 [Melampsora larici-populina
98AG31]
Length = 635
Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 9/76 (11%)
Query: 29 YFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD---------GISIRFPRVTKIRDDKD 79
Y + +KP + + + VWE+ A+ S + I++A GIS+RFPR + RDDK
Sbjct: 536 YDTGDVKPDVWIENRIVWEVLAADLSLSPIYSAARGLCGDGTRGISLRFPRYIRERDDKG 595
Query: 80 WKTATNLPELKVLFKK 95
+ T ++ ++++
Sbjct: 596 PEDGTGPDQVAEMYER 611
>gi|226294286|gb|EEH49706.1| ATP dependent DNA ligase domain-containing protein
[Paracoccidioides brasiliensis Pb18]
Length = 832
Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 35 KPVLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
+P + K V E+ G+ F ++ + ++RFPRV KI +D+D + AT L EL++L K
Sbjct: 457 EPQVLFKTPFVVEMLGSGFKRSP--GVNYFTLRFPRVLKIHNDRDVEYATTLEELQMLAK 514
Query: 95 KSKET 99
++
Sbjct: 515 EASSV 519
>gi|449669217|ref|XP_002166379.2| PREDICTED: DNA ligase 4 [Hydra magnipapillata]
Length = 891
Score = 38.1 bits (87), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 23/33 (69%)
Query: 1 MAKNERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
+ K+ + E K DGER+Q+HK G ++ YFSR+
Sbjct: 256 VLKHSEFFIETKIDGERIQLHKNGEQYAYFSRN 288
>gi|322697489|gb|EFY89268.1| DNA ligase I, putative [Metarhizium acridum CQMa 102]
Length = 871
Score = 38.1 bits (87), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD----- 62
Y + + GER + F +S + P + + Q VWE++ A+ + + +TA
Sbjct: 752 YDDGEDSGERKNTRSQMPSFIQYSGPM-PDVWFEPQEVWEMAFADVTLSPTYTAAIGLVS 810
Query: 63 ---GISIRFPRVTKIRDDKDWKTATNLPELKVLFKK 95
G+S+RFPR K R+DK + A+ L L++K
Sbjct: 811 DERGLSLRFPRFLKKREDKSLEEASTNEFLAGLWRK 846
>gi|452823268|gb|EME30280.1| DNA ligase 1 [Galdieria sulphuraria]
Length = 741
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 9/62 (14%)
Query: 45 VWEISGAEFSQAEIHTAD---------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKK 95
VWE A+ + + HTA GI++RFPR +IR+DK AT ++ L+
Sbjct: 677 VWETRCADLTLSPSHTAAKGMLSEEDKGIALRFPRFIRIREDKSVDDATTAEQIVELYSN 736
Query: 96 SK 97
K
Sbjct: 737 QK 738
>gi|357168383|ref|XP_003581620.1| PREDICTED: LOW QUALITY PROTEIN: putative DNA ligase 4-like
[Brachypodium distachyon]
Length = 1249
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 20/26 (76%)
Query: 9 SEIKYDGERVQVHKKGNEFKYFSRSL 34
+E K+DG+R+Q+HK G E +FSR+
Sbjct: 277 AECKFDGDRIQIHKNGEEIHFFSRTF 302
>gi|212529366|ref|XP_002144840.1| DNA ligase, putative [Talaromyces marneffei ATCC 18224]
gi|210074238|gb|EEA28325.1| DNA ligase, putative [Talaromyces marneffei ATCC 18224]
Length = 1005
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 31/45 (68%), Gaps = 3/45 (6%)
Query: 63 GISIRFPRVTKIRDDKDWKTATNLPE---LKVLFKKSKETSDFTL 104
G+++RFPR K+R DKDWK+A ++ E LK +K ++ +FT+
Sbjct: 635 GLTLRFPRFKKLRMDKDWKSALSVQEFLDLKSNVEKEQKEKEFTV 679
>gi|304394600|ref|ZP_07376519.1| ATP-dependent DNA ligase [Ahrensia sp. R2A130]
gi|303293261|gb|EFL87642.1| ATP-dependent DNA ligase [Ahrensia sp. R2A130]
Length = 576
Score = 38.1 bits (87), Expect = 0.69, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 41/70 (58%), Gaps = 7/70 (10%)
Query: 36 PVLEHKAQP----VWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKV 91
PV KAQP V E++ ++ H + GI++RFPR++K+R DK + A L ++
Sbjct: 510 PVRSVKAQPDFGLVLEVAFEGLQRSTRHKS-GIAMRFPRISKLRWDKPPREADTLASVEA 568
Query: 92 LFKKSKETSD 101
L + ++TSD
Sbjct: 569 LLE--QQTSD 576
>gi|401426011|ref|XP_003877490.1| putative DNA ligase I [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322493735|emb|CBZ29025.1| putative DNA ligase I [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 767
Score = 38.1 bits (87), Expect = 0.69, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 8/58 (13%)
Query: 45 VWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
VWE+ A+ S + +H A GI++RFPR + R+DK AT+ ++ ++K
Sbjct: 695 VWEVKAADLSVSPVHQAAVGLVDPNKGIALRFPRYLRQREDKKPADATSAQQVADMYK 752
>gi|147821631|emb|CAN60030.1| hypothetical protein VITISV_000373 [Vitis vinifera]
Length = 304
Score = 38.1 bits (87), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 19/24 (79%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSRS 33
E K+DG+R+Q+HK G E +FSR+
Sbjct: 258 ECKFDGDRIQIHKNGEEIHFFSRT 281
>gi|383830461|ref|ZP_09985550.1| ATP-dependent DNA ligase I [Saccharomonospora xinjiangensis XJ-54]
gi|383463114|gb|EID55204.1| ATP-dependent DNA ligase I [Saccharomonospora xinjiangensis XJ-54]
Length = 509
Score = 38.1 bits (87), Expect = 0.71, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 23/31 (74%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSRSLKPVLEH 40
E K DG R+QVH++G++ + ++R+L+ V H
Sbjct: 209 EYKLDGARIQVHRRGDDVRVYTRTLRDVTAH 239
>gi|374632962|ref|ZP_09705329.1| ATP-dependent DNA ligase I [Metallosphaera yellowstonensis MK1]
gi|373524446|gb|EHP69323.1| ATP-dependent DNA ligase I [Metallosphaera yellowstonensis MK1]
Length = 599
Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 6/57 (10%)
Query: 45 VWEISGAEFSQAEIHTA------DGISIRFPRVTKIRDDKDWKTATNLPELKVLFKK 95
V EI GAE + + +HT G+SIRFPR + R DK + AT E+ ++ K
Sbjct: 529 VAEIIGAEITISPLHTCCRETGKGGLSIRFPRFIRWRPDKSPEDATTTKEIMEMYSK 585
>gi|112732548|dbj|BAF03051.1| DNA ligase IV [Populus nigra]
Length = 1319
Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 19/25 (76%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSRSL 34
E K+DG+R+Q+HK G E YFSR+
Sbjct: 259 ECKFDGDRIQIHKNGAEVHYFSRNF 283
>gi|357575836|gb|AET85548.1| DNA ligase [Aspergillus glaucus]
Length = 1018
Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 21/27 (77%)
Query: 63 GISIRFPRVTKIRDDKDWKTATNLPEL 89
G+++RFPR ++R DKDWKTA ++ E
Sbjct: 638 GLTLRFPRFKRLRSDKDWKTALSVQEF 664
>gi|346326802|gb|EGX96398.1| DNA ligase (Polydeoxyribonucleotide synthase) [Cordyceps militaris
CM01]
Length = 861
Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 18/92 (19%)
Query: 20 VHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD-----------GISIRF 68
H GN+ + P + + Q VWE+ A+ + + + A GIS+RF
Sbjct: 764 AHSTGNQHQ-------PDVWFEPQYVWEVKTADLTLSPRYKAGCKEGVDPAGGKGISLRF 816
Query: 69 PRVTKIRDDKDWKTATNLPELKVLFKKSKETS 100
PR KIRDDK AT+ ++ +++K + +
Sbjct: 817 PRFIKIRDDKKPDEATSSRQVAEMYRKQESVT 848
>gi|224144326|ref|XP_002325262.1| predicted protein [Populus trichocarpa]
gi|222866696|gb|EEF03827.1| predicted protein [Populus trichocarpa]
Length = 1242
Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 19/25 (76%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSRSL 34
E K+DG+R+Q+HK G E YFSR+
Sbjct: 259 ECKFDGDRIQIHKNGAEVHYFSRNF 283
>gi|345317051|ref|XP_003429827.1| PREDICTED: DNA ligase 1-like, partial [Ornithorhynchus anatinus]
Length = 150
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 8/61 (13%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
VWE+ A+ S + I+ A GIS+RFPR ++R DK + AT ++ L S
Sbjct: 40 VWEVKCADLSLSPIYPAAVGLVDSEKGISLRFPRFVRVRGDKKPEEATTSAQVSSLLAAS 99
Query: 97 K 97
Sbjct: 100 P 100
>gi|242077098|ref|XP_002448485.1| hypothetical protein SORBIDRAFT_06g027820 [Sorghum bicolor]
gi|241939668|gb|EES12813.1| hypothetical protein SORBIDRAFT_06g027820 [Sorghum bicolor]
Length = 1164
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 20/26 (76%)
Query: 9 SEIKYDGERVQVHKKGNEFKYFSRSL 34
+E K+DG+R+Q+HK G E +FSR +
Sbjct: 251 AECKFDGDRIQIHKNGEEIHFFSRCI 276
>gi|320170076|gb|EFW46975.1| ATP dependent DNA ligase [Capsaspora owczarzaki ATCC 30864]
Length = 1199
Score = 38.1 bits (87), Expect = 0.74, Method: Composition-based stats.
Identities = 13/25 (52%), Positives = 23/25 (92%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSR 32
+ EIK+DG+RV +HK+G++++Y+SR
Sbjct: 370 FMEIKFDGDRVMMHKQGDKYQYWSR 394
>gi|406601860|emb|CCH46521.1| DNA ligase 1 [Wickerhamomyces ciferrii]
Length = 768
Score = 38.1 bits (87), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 7/75 (9%)
Query: 17 RVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD------GISIRFPR 70
+ ++ +EF F S +P + + ++E+ A+ S + ++ A G+S+RFPR
Sbjct: 680 KTEIEDPKSEFT-FDSSAEPDVWFEPSTLFEVLTADLSLSPVYKAGAEVFGRGVSLRFPR 738
Query: 71 VTKIRDDKDWKTATN 85
+IRDDK + AT+
Sbjct: 739 FLRIRDDKSPEDATS 753
>gi|330506981|ref|YP_004383409.1| DNA ligase [Methanosaeta concilii GP6]
gi|328927789|gb|AEB67591.1| DNA ligase [Methanosaeta concilii GP6]
Length = 556
Score = 38.1 bits (87), Expect = 0.74, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 38 LEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
+E K ++E++ E +++ +++ G ++RFPR+ ++RDDK + A +L ++ L++
Sbjct: 492 VELKPAVIFEVAYEEIQKSQSYSS-GYALRFPRLVRVRDDKSLEEADSLERVESLYR 547
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 16/28 (57%), Positives = 19/28 (67%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSRSLKPV 37
E KYDG RVQ+HK G + FSR L+ V
Sbjct: 248 EWKYDGARVQIHKDGKRVRIFSRRLEDV 275
>gi|71027867|ref|XP_763577.1| DNA ligase I [Theileria parva strain Muguga]
gi|68350530|gb|EAN31294.1| DNA ligase I, putative [Theileria parva]
Length = 858
Score = 38.1 bits (87), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 8/80 (10%)
Query: 13 YDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GI 64
+D + + K F S ++P + + VWE A+ S + ++TA GI
Sbjct: 764 HDSLQKDITKTKPSFYDVSEKMEPDVWFLPKKVWECKAADLSLSPVYTAANRLNANEKGI 823
Query: 65 SIRFPRVTKIRDDKDWKTAT 84
+RFPR ++R+DK + AT
Sbjct: 824 GLRFPRFLRVREDKKPEEAT 843
>gi|357449599|ref|XP_003595076.1| DNA ligase [Medicago truncatula]
gi|355484124|gb|AES65327.1| DNA ligase [Medicago truncatula]
Length = 1244
Score = 38.1 bits (87), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 20/26 (76%)
Query: 9 SEIKYDGERVQVHKKGNEFKYFSRSL 34
+E K+DG+R+Q+HK G E +FSR+
Sbjct: 249 AECKFDGDRIQIHKNGTEIHFFSRNF 274
>gi|340518669|gb|EGR48909.1| predicted protein [Trichoderma reesei QM6a]
Length = 881
Score = 38.1 bits (87), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 8/78 (10%)
Query: 36 PVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNLP 87
P + + Q VWE++ A+ + + ++TA G+S+RFPR K RDDK + A+
Sbjct: 789 PDVWFEPQEVWEMAFADITLSPVYTAAIGLVSDERGLSLRFPRFLKKRDDKSIEEASTNE 848
Query: 88 ELKVLFKKSKETSDFTLK 105
L L++K + + T K
Sbjct: 849 FLANLWRKQEAKAASTAK 866
>gi|299751567|ref|XP_001830349.2| DNA ligase [Coprinopsis cinerea okayama7#130]
gi|298409433|gb|EAU91496.2| DNA ligase [Coprinopsis cinerea okayama7#130]
Length = 833
Score = 38.1 bits (87), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 8/61 (13%)
Query: 33 SLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTAT 84
+P + K + VWEI GA+ +++ + A G+S+RFPR ++R DK + A+
Sbjct: 728 GFRPDVYFKPKEVWEIRGADVTESPVSLAALGLIAGNRGLSLRFPRFIRLRPDKSIEQAS 787
Query: 85 N 85
Sbjct: 788 T 788
>gi|194215708|ref|XP_001488637.2| PREDICTED: DNA ligase 1 [Equus caballus]
Length = 913
Score = 38.1 bits (87), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 8/57 (14%)
Query: 45 VWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDWKTATNLPELKVLF 93
VWE+ A+ S + I+ A GIS+RFPR ++R+DK + AT ++ L+
Sbjct: 835 VWEVKCADLSLSPIYPAARGMMDGEKGISLRFPRFIRVREDKKPEEATTSAQVAHLY 891
>gi|258563926|ref|XP_002582708.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237908215|gb|EEP82616.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 828
Score = 38.1 bits (87), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 8/69 (11%)
Query: 35 KPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNL 86
+P + + Q VWE++ A+ + + +TA G+S+RFPR ++R+DK + A+
Sbjct: 743 EPEVWFEPQEVWEVAFADITLSPTYTAAIGLVSEERGLSLRFPRFLRVREDKTIEEASTS 802
Query: 87 PELKVLFKK 95
L L++K
Sbjct: 803 AYLAELWRK 811
>gi|378730069|gb|EHY56528.1| DNA ligase 1 [Exophiala dermatitidis NIH/UT8656]
Length = 878
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 8/69 (11%)
Query: 35 KPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNL 86
+P + + Q VWE++ A+ + + +TA G+S+RFPR K+R+DK + A+
Sbjct: 777 EPDVWFEPQEVWEMAFADITLSPTYTAAIGLVNEDRGLSMRFPRFLKVREDKGIEEASTN 836
Query: 87 PELKVLFKK 95
L L++K
Sbjct: 837 EFLASLYRK 845
>gi|396483568|ref|XP_003841737.1| similar to DNA ligase I [Leptosphaeria maculans JN3]
gi|312218312|emb|CBX98258.1| similar to DNA ligase I [Leptosphaeria maculans JN3]
Length = 895
Score = 38.1 bits (87), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 8/59 (13%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKK 95
VWE++ A+ + + +TA G+S RFPR ++R+DK + AT EL L+ K
Sbjct: 815 VWEVAFADLTLSPTYTAAVGLVSEERGLSTRFPRFLRVREDKGIEEATEAHELADLYWK 873
>gi|87198094|ref|YP_495351.1| ATP-dependent DNA ligase [Novosphingobium aromaticivorans DSM
12444]
gi|87133775|gb|ABD24517.1| DNA ligase (ATP) [Novosphingobium aromaticivorans DSM 12444]
Length = 531
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 9/75 (12%)
Query: 26 EFKYFSRSLK--------PVLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDD 77
E K+ R ++ PV E V+E++ ++ H + G+++RFPR+++IR D
Sbjct: 455 ELKWLDRHVRQHTVAKFGPVRETDKSLVFEVAFDSVHASKRHKS-GVAMRFPRISRIRTD 513
Query: 78 KDWKTATNLPELKVL 92
K A L LK L
Sbjct: 514 KPAHEADRLETLKAL 528
>gi|327355725|gb|EGE84582.1| DNA ligase [Ajellomyces dermatitidis ATCC 18188]
Length = 861
Score = 37.7 bits (86), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 8/69 (11%)
Query: 35 KPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNL 86
+P + + Q VWE++ A+ + + +TA G+S+RFPR ++R+DK + A++
Sbjct: 752 EPEVWFEPQEVWEVAFADVTLSPTYTAAIGLVSEERGLSLRFPRFIRVREDKGIEEASSS 811
Query: 87 PELKVLFKK 95
L L++K
Sbjct: 812 EYLASLWRK 820
>gi|148690092|gb|EDL22039.1| ligase IV, DNA, ATP-dependent, isoform CRA_b [Mus musculus]
Length = 69
Score = 37.7 bits (86), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 3 KNERCYSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKA-QPVWEISGA 51
K + Y E K DGER+Q+HK G ++YFSR+ +H + W G
Sbjct: 4 KQQSFYIETKLDGERMQMHKDGALYRYFSRNGYNYTDHICFRACWPGGGG 53
>gi|452988517|gb|EME88272.1| hypothetical protein MYCFIDRAFT_125670 [Pseudocercospora fijiensis
CIRAD86]
Length = 909
Score = 37.7 bits (86), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 44 PVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKK 95
P + + +EF +H G+S+RFPR ++RDDK + AT ++ +++K
Sbjct: 842 PRYRAASSEFGSDGVHK--GVSLRFPRFIRVRDDKKPEEATTSRQVAEMYRK 891
>gi|261200583|ref|XP_002626692.1| DNA ligase I [Ajellomyces dermatitidis SLH14081]
gi|239593764|gb|EEQ76345.1| DNA ligase I [Ajellomyces dermatitidis SLH14081]
gi|239607362|gb|EEQ84349.1| DNA ligase I [Ajellomyces dermatitidis ER-3]
Length = 861
Score = 37.7 bits (86), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 8/69 (11%)
Query: 35 KPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNL 86
+P + + Q VWE++ A+ + + +TA G+S+RFPR ++R+DK + A++
Sbjct: 752 EPEVWFEPQEVWEVAFADVTLSPTYTAAIGLVSEERGLSLRFPRFIRVREDKGIEEASSS 811
Query: 87 PELKVLFKK 95
L L++K
Sbjct: 812 EYLASLWRK 820
>gi|408399590|gb|EKJ78689.1| hypothetical protein FPSE_01177 [Fusarium pseudograminearum CS3096]
Length = 881
Score = 37.7 bits (86), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 8/69 (11%)
Query: 35 KPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNL 86
+P + + Q VWE++ A+ + + +TA G+S+RFPR K RDDK + A+
Sbjct: 786 RPDIWFEPQEVWEMAFADITLSPTYTAAIGLVSEERGLSLRFPRFMKKRDDKSLEEASTN 845
Query: 87 PELKVLFKK 95
L L++K
Sbjct: 846 DFLAGLWRK 854
>gi|390337384|ref|XP_787257.3| PREDICTED: DNA ligase 4 [Strongylocentrotus purpuratus]
Length = 929
Score = 37.7 bits (86), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 45 VWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELK 90
+ ++ E + + ++ G ++RFPR+ K+RDDKDW E++
Sbjct: 571 IVQVKATEINSSNVYRT-GCTLRFPRLEKVRDDKDWHQCMTTEEME 615
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/23 (60%), Positives = 20/23 (86%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSR 32
E K DGER+Q+HK+G+++ YFSR
Sbjct: 285 ETKLDGERMQLHKEGDKYMYFSR 307
>gi|363745059|ref|XP_003643178.1| PREDICTED: DNA ligase 1-like [Gallus gallus]
Length = 775
Score = 37.7 bits (86), Expect = 0.83, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 8/62 (12%)
Query: 42 AQPVWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDWKTATNLPELKVLF 93
A VWE+ + S + ++ A GIS+RFPR ++R DK + AT+ ++ L+
Sbjct: 696 AVQVWEVKCGDLSISPVYRAAVGLVDEDKGISLRFPRFLRVRGDKKPEEATSSTQVAELY 755
Query: 94 KK 95
KK
Sbjct: 756 KK 757
>gi|159464902|ref|XP_001690680.1| DNA ligase IV [Chlamydomonas reinhardtii]
gi|158270407|gb|EDO96255.1| DNA ligase IV [Chlamydomonas reinhardtii]
Length = 831
Score = 37.7 bits (86), Expect = 0.83, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 24/30 (80%)
Query: 61 ADGISIRFPRVTKIRDDKDWKTATNLPELK 90
A G ++RFPR+T++R+D+ +AT+L EL+
Sbjct: 514 AAGCTLRFPRITRLREDRSPASATSLAELR 543
>gi|346327036|gb|EGX96632.1| DNA ligase I, putative [Cordyceps militaris CM01]
Length = 865
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 9/105 (8%)
Query: 4 NERCYSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD- 62
N+ Y E GE + F +S + P + + Q VWE++ A+ + + +TA
Sbjct: 746 NKAFYDEGAETGEPKNTRLQMPSFIEYSGPM-PDVWFEPQEVWEMAFADITLSPTYTAAI 804
Query: 63 -------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKSKETS 100
G+S+RFPR K RDDK A+ L L++K + ++
Sbjct: 805 GLVSDERGLSLRFPRFLKKRDDKSIDEASTNEFLAGLWRKQEASA 849
>gi|350409555|ref|XP_003488777.1| PREDICTED: DNA ligase 4-like [Bombus impatiens]
Length = 896
Score = 37.7 bits (86), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 63 GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKSKETSDFT 103
G S+RFPRVT +R DK W LK+L K ++ T
Sbjct: 564 GYSLRFPRVTSVRTDKPWYDVCTTDNLKLLIKDTQPIQKLT 604
Score = 35.8 bits (81), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 19/25 (76%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSR 32
+ + KYDGER Q+H K ++KYF+R
Sbjct: 261 FVQCKYDGERSQIHMKNGKYKYFTR 285
>gi|452837927|gb|EME39868.1| hypothetical protein DOTSEDRAFT_74682 [Dothistroma septosporum
NZE10]
Length = 899
Score = 37.7 bits (86), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
Query: 29 YFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDW 80
Y +P + + Q VWE+ A+ + + +TA G+S+RFPR K+R+DK
Sbjct: 806 YVEYGGEPAVWFEPQEVWEMIFADITLSPTYTAAIGLVSEERGLSLRFPRFLKVREDKSI 865
Query: 81 KTATNLPELKVLFKKSK 97
+ A+ L L++K +
Sbjct: 866 EEASTNHFLADLYRKQQ 882
>gi|15679575|ref|NP_276692.1| DNA ligase [Methanothermobacter thermautotrophicus str. Delta H]
gi|2494167|sp|Q50566.1|DNLI_METTH RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|1272332|gb|AAC44812.1| putative DNA ligase [Methanothermobacter thermautotrophicus]
gi|2622703|gb|AAB86053.1| DNA ligase [Methanothermobacter thermautotrophicus str. Delta H]
Length = 561
Score = 37.7 bits (86), Expect = 0.88, Method: Composition-based stats.
Identities = 15/32 (46%), Positives = 22/32 (68%)
Query: 6 RCYSEIKYDGERVQVHKKGNEFKYFSRSLKPV 37
R + E KYDG RVQ+H+ G+E F+R L+ +
Sbjct: 245 RAFCETKYDGIRVQIHRCGDEISIFTRRLENI 276
>gi|150863848|ref|XP_001382465.2| hypothetical protein PICST_56005 [Scheffersomyces stipitis CBS
6054]
gi|149385104|gb|ABN64436.2| ATP dependent DNA ligase [Scheffersomyces stipitis CBS 6054]
Length = 719
Score = 37.7 bits (86), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 6/67 (8%)
Query: 35 KPVLEHKAQPVWEISGAEFSQAEIHTA------DGISIRFPRVTKIRDDKDWKTATNLPE 88
KP + + ++E+ A+ S + I+ A GIS+RFPR +IRDDK + AT+ +
Sbjct: 648 KPDVWFEPTTIFEVLTADLSLSPIYKAAHQEYGKGISLRFPRFLRIRDDKGIEDATSSTQ 707
Query: 89 LKVLFKK 95
+ +++
Sbjct: 708 VSEFYER 714
>gi|432093391|gb|ELK25477.1| DNA ligase 1 [Myotis davidii]
Length = 838
Score = 37.7 bits (86), Expect = 0.90, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 30/48 (62%)
Query: 54 SQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKSKETSD 101
+ A++ + GIS+RFPR ++R+DK + AT ++ L+K+ + +
Sbjct: 775 TSAQVDSEKGISLRFPRFVRVREDKTPEQATTSAQVAWLYKRQSQIQN 822
>gi|78779117|ref|YP_397229.1| ATP-dependent DNA ligase [Prochlorococcus marinus str. MIT 9312]
gi|78712616|gb|ABB49793.1| ATP-dependent DNA ligase-like protein [Prochlorococcus marinus str.
MIT 9312]
Length = 546
Score = 37.7 bits (86), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 36 PVLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKK 95
PV K + V+EIS + ++ H + GI++RFPR+TK R DK A +L L KK
Sbjct: 486 PVRSLKPEMVFEISFEKIQISKRHKS-GIAVRFPRITKWRKDKKINDADSLENAYALMKK 544
>gi|389852928|ref|YP_006355162.1| ATP-dependent DNA ligase [Pyrococcus sp. ST04]
gi|388250234|gb|AFK23087.1| ATP-dependent DNA ligase [Pyrococcus sp. ST04]
Length = 559
Score = 37.7 bits (86), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 21/28 (75%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSRSLKPV 37
EIKYDG RVQVHK G++ +SR L+ V
Sbjct: 247 EIKYDGARVQVHKDGDKIIVYSRRLENV 274
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 14/93 (15%)
Query: 15 GERVQVHKKGNEFK-----YFSRSLKP-VLEHKAQPVW-------EISGAEFSQAEIHTA 61
GE ++V K G+ F F++ LKP +++ + + VW E++ E ++ + +
Sbjct: 459 GEFLEVGKVGSGFTDEDLVEFTKMLKPLIIKEEGKRVWIEPKIVIEVTYQEIQKSPKYKS 518
Query: 62 DGISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
G ++RFPR +RDDK + A + + L++
Sbjct: 519 -GFALRFPRYVALRDDKGPEDADTIERIAQLYE 550
>gi|315055651|ref|XP_003177200.1| DNA ligase [Arthroderma gypseum CBS 118893]
gi|311339046|gb|EFQ98248.1| DNA ligase [Arthroderma gypseum CBS 118893]
Length = 844
Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 29 YFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDW 80
Y S +P + + Q VWE++ A+ + + +TA G+S+RFPR ++R+DK
Sbjct: 756 YVEYSGEPEVWFQPQEVWEMAFADITLSPTYTAAIGLVSDERGLSLRFPRFLRVREDKSI 815
Query: 81 KTATNLPELKVLFKKSKE 98
A+ + L+ K E
Sbjct: 816 DEASTSGYIAHLWDKQAE 833
>gi|357130735|ref|XP_003567002.1| PREDICTED: uncharacterized protein LOC100835014 [Brachypodium
distachyon]
Length = 1365
Score = 37.7 bits (86), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 14/97 (14%)
Query: 8 YSEIK--YDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--- 62
Y E+K Y ER+ K Y+ P L A+ VWEI GA+ + + +H A
Sbjct: 1256 YKEMKEFYSEERILPKKP----VYYKTDELPELWFSAEQVWEIRGADLTLSPVHHAATGI 1311
Query: 63 -----GISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
GIS+R PR + D+ + + ++ +FK
Sbjct: 1312 VHPSRGISVRMPRYIRSVPDRSPEDCSTATDVACMFK 1348
>gi|329765374|ref|ZP_08256954.1| DNA ligase I, ATP-dependent Dnl1 [Candidatus Nitrosoarchaeum limnia
SFB1]
gi|329138280|gb|EGG42536.1| DNA ligase I, ATP-dependent Dnl1 [Candidatus Nitrosoarchaeum limnia
SFB1]
Length = 578
Score = 37.7 bits (86), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%)
Query: 9 SEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTADGISI 66
+E K DGERVQ+H +G++ FSRSL+ + + V +I A + I A+ ++I
Sbjct: 239 AEYKLDGERVQLHIEGDKVVLFSRSLENITSYYPDIVEKIPKAIQANKVILEAEAVAI 296
>gi|322789526|gb|EFZ14793.1| hypothetical protein SINV_08644 [Solenopsis invicta]
Length = 81
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 20/29 (68%)
Query: 4 NERCYSEIKYDGERVQVHKKGNEFKYFSR 32
N+ Y + KYDGER Q+H K FKYF+R
Sbjct: 31 NDLYYVQTKYDGERSQLHMKDGTFKYFTR 59
>gi|71021171|ref|XP_760816.1| hypothetical protein UM04669.1 [Ustilago maydis 521]
gi|46100293|gb|EAK85526.1| hypothetical protein UM04669.1 [Ustilago maydis 521]
Length = 1068
Score = 37.7 bits (86), Expect = 0.97, Method: Composition-based stats.
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 8/69 (11%)
Query: 33 SLKPVLEHKAQPVWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDWKTAT 84
SL P + K VWEI GA+ + + +TA G+SIRFPR + R+DK + A+
Sbjct: 960 SLWPDVWWKPSEVWEIRGADVTISPNYTAALGLVSEERGLSIRFPRFIQRREDKTIEQAS 1019
Query: 85 NLPELKVLF 93
L ++
Sbjct: 1020 TPASLAKIY 1028
>gi|448667084|ref|ZP_21685685.1| DNA ligase [Haloarcula amylolytica JCM 13557]
gi|445770606|gb|EMA21665.1| DNA ligase [Haloarcula amylolytica JCM 13557]
Length = 554
Score = 37.7 bits (86), Expect = 0.98, Method: Composition-based stats.
Identities = 34/126 (26%), Positives = 56/126 (44%), Gaps = 20/126 (15%)
Query: 5 ERCYSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIH----- 59
+R E KYDG RVQ+H G + + FSR+++ V + + V + + A +
Sbjct: 248 DRAAVEWKYDGARVQIHFDGEDARLFSRNMEEVTDPLPEVVDTVESTLDAPAILDGEVVA 307
Query: 60 -TADGISI-------RFPR---VTKIRDDKDWKTATNLPELKVLFKKSKETSDFTLKPKY 108
ADG + RF R V R+D A L L ++ D L+ ++
Sbjct: 308 VAADGDPLPFQEVLRRFRRKHDVAAARED----VAVRLHAFDCLHADGEDLLDAPLETRH 363
Query: 109 DRIKNL 114
DR+++L
Sbjct: 364 DRLESL 369
>gi|71981465|ref|NP_498653.2| Protein LIG-4 [Caenorhabditis elegans]
gi|351021323|emb|CCD63588.1| Protein LIG-4 [Caenorhabditis elegans]
Length = 741
Score = 37.7 bits (86), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 24/30 (80%)
Query: 4 NERCYSEIKYDGERVQVHKKGNEFKYFSRS 33
++ + + K+DGE V +HKKGNE+++F+R+
Sbjct: 251 GQKFFLQTKFDGENVLLHKKGNEYRWFTRN 280
>gi|336122247|ref|YP_004577022.1| DNA ligase [Methanothermococcus okinawensis IH1]
gi|334856768|gb|AEH07244.1| DNA ligase [Methanothermococcus okinawensis IH1]
Length = 580
Score = 37.7 bits (86), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQ 55
E KYDG RVQ+HKK + K +SR L+ + + V E+ + +
Sbjct: 250 ETKYDGARVQIHKKNKDVKIYSRKLEDITNSIPEIVEEVKNMDVNN 295
>gi|375104668|ref|ZP_09750929.1| ATP-dependent DNA ligase [Burkholderiales bacterium JOSHI_001]
gi|374665399|gb|EHR70184.1| ATP-dependent DNA ligase [Burkholderiales bacterium JOSHI_001]
Length = 570
Score = 37.7 bits (86), Expect = 0.99, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 7/69 (10%)
Query: 32 RSLKPVLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKV 91
RS++P L V+E+ G E Q G+++RFPR+ ++R DK A L L+
Sbjct: 509 RSVRPTL------VFEL-GFEGIQRSARHKSGVALRFPRMLRLRPDKPLHQADTLDSLQA 561
Query: 92 LFKKSKETS 100
L + ++ S
Sbjct: 562 LLRAREDIS 570
>gi|308466931|ref|XP_003095716.1| CRE-LIG-1 protein [Caenorhabditis remanei]
gi|308244481|gb|EFO88433.1| CRE-LIG-1 protein [Caenorhabditis remanei]
Length = 779
Score = 37.7 bits (86), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 8/64 (12%)
Query: 30 FSRSLKPVLEHKAQPVWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDWK 81
F +LKP V+EI A+ + + H A GIS+RFPR +IRDDK+
Sbjct: 547 FDPTLKPDDIFAPHLVFEIKCADITISPRHKAASGLTEDGKGISLRFPRFLRIRDDKNAD 606
Query: 82 TATN 85
AT+
Sbjct: 607 DATS 610
>gi|254584268|ref|XP_002497702.1| ZYRO0F11572p [Zygosaccharomyces rouxii]
gi|238940595|emb|CAR28769.1| ZYRO0F11572p [Zygosaccharomyces rouxii]
Length = 731
Score = 37.7 bits (86), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 27 FKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD------GISIRFPRVTKIRDDKDW 80
F + + +P + + ++E+ A+ S + ++ A GIS+RFPR +IRDDK
Sbjct: 652 FYVYDSAQQPDVWFEPTLLFEVLAADLSLSPVYKAGSAQYDKGISLRFPRFLRIRDDKSV 711
Query: 81 KTATNLPELKVLFKKSKETS 100
+ AT+ ++ L++ S
Sbjct: 712 EEATSSEQVVDLYEAQAHLS 731
>gi|153007138|ref|YP_001381463.1| ATP-dependent DNA ligase [Anaeromyxobacter sp. Fw109-5]
gi|224487900|sp|A7HID3.1|DNLI_ANADF RecName: Full=Probable DNA ligase; AltName:
Full=Polydeoxyribonucleotide synthase [ATP]
gi|152030711|gb|ABS28479.1| DNA ligase I, ATP-dependent Dnl1 [Anaeromyxobacter sp. Fw109-5]
Length = 519
Score = 37.7 bits (86), Expect = 1.0, Method: Composition-based stats.
Identities = 16/26 (61%), Positives = 19/26 (73%)
Query: 12 KYDGERVQVHKKGNEFKYFSRSLKPV 37
K DG RVQVHK G E + FSR+L+ V
Sbjct: 213 KLDGARVQVHKDGGEVRVFSRALRDV 238
>gi|91773076|ref|YP_565768.1| DNA ligase I, ATP-dependent (dnl1) [Methanococcoides burtonii DSM
6242]
gi|121691786|sp|Q12X08.1|DNLI_METBU RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|91712091|gb|ABE52018.1| DNA ligase 1, ATP-dependent [Methanococcoides burtonii DSM 6242]
Length = 567
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSRSLKPV 37
E K+DG RVQ+HKKG+ FSR L+ V
Sbjct: 260 EWKFDGARVQIHKKGDSINIFSRRLENV 287
>gi|356556242|ref|XP_003546435.1| PREDICTED: DNA ligase 4-like [Glycine max]
Length = 1171
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 19/25 (76%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSRSL 34
E K+DG+R+Q+HK G E +FSR+
Sbjct: 250 ECKFDGDRIQIHKNGTEIHFFSRNF 274
>gi|336467135|gb|EGO55299.1| hypothetical protein NEUTE1DRAFT_85482 [Neurospora tetrasperma FGSC
2508]
gi|350288242|gb|EGZ69478.1| ATP-dependent DNA ligase [Neurospora tetrasperma FGSC 2509]
Length = 871
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 9/90 (10%)
Query: 14 DGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GIS 65
DGE VH F ++ P + + Q VWE++ A+ + + +TA G+S
Sbjct: 747 DGEPRNVHVAKPGFVEYAGG-NPDVWFEPQEVWEVAFADITISPTYTAAIGLVREDKGLS 805
Query: 66 IRFPRVTKIRDDKDWKTATNLPELKVLFKK 95
+RFPR + R+DK + A+ L L++K
Sbjct: 806 LRFPRFLRKREDKGIEEASTSDFLAGLWRK 835
>gi|326403803|ref|YP_004283885.1| putative DNA ligase [Acidiphilium multivorum AIU301]
gi|325050665|dbj|BAJ81003.1| putative DNA ligase [Acidiphilium multivorum AIU301]
Length = 522
Score = 37.4 bits (85), Expect = 1.0, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 33 SLKPVLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVL 92
S PV E + V E+ G + +Q GI++RFPR+ +IR+DK A L +++L
Sbjct: 461 SYGPVREVEKAIVLEV-GFDAAQRSTRHKSGIALRFPRILRIREDKPAAEADTLETVRLL 519
Query: 93 F 93
Sbjct: 520 L 520
>gi|301117706|ref|XP_002906581.1| DNA ligase, putative [Phytophthora infestans T30-4]
gi|262107930|gb|EEY65982.1| DNA ligase, putative [Phytophthora infestans T30-4]
Length = 971
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 45 VWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPEL 89
+ E+ G E S ++ G++IRFPR IR+DK+W +L +L
Sbjct: 586 ILEVYGFELSFTTLYQT-GLTIRFPRCKAIRNDKEWYQCIDLQDL 629
>gi|409730230|ref|ZP_11271816.1| DNA ligase (ATP) [Halococcus hamelinensis 100A6]
gi|448723593|ref|ZP_21706110.1| DNA ligase (ATP) [Halococcus hamelinensis 100A6]
gi|445787429|gb|EMA38173.1| DNA ligase (ATP) [Halococcus hamelinensis 100A6]
Length = 556
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 5 ERCYSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEH 40
ER E KYDG RV++H G+E + F+R L+ V E
Sbjct: 244 ERPLLEYKYDGMRVKIHVDGDEIRVFTRRLEDVTEQ 279
>gi|344301030|gb|EGW31342.1| hypothetical protein SPAPADRAFT_56206 [Spathaspora passalidarum
NRRL Y-27907]
Length = 715
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 6/57 (10%)
Query: 45 VWEISGAEFSQAEIHTAD------GISIRFPRVTKIRDDKDWKTATNLPELKVLFKK 95
++E+ A+ S + I+ A GIS+RFPR +IRDDK + AT+ E+ +++
Sbjct: 654 LFEVLTADLSLSPIYKAAHTEYGKGISLRFPRFLRIRDDKGIEDATSSTEVAEFYER 710
>gi|213405927|ref|XP_002173735.1| DNA ligase [Schizosaccharomyces japonicus yFS275]
gi|212001782|gb|EEB07442.1| DNA ligase [Schizosaccharomyces japonicus yFS275]
Length = 915
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 24/37 (64%)
Query: 61 ADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKSK 97
+ G ++RFPR+ IR DKDW++A E L +++K
Sbjct: 581 STGFTLRFPRLQHIRLDKDWRSALTFNEFLALNEQAK 617
>gi|7493776|pir||S71741 DNA ligase (ATP) (EC 6.5.1.1) - yeast (Candida albicans)
Length = 864
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 1 MAKNERCYSEIKYDGERVQVHKKGNEFKYFSRSLK 35
+ + Y E K DG+R+ +HK G+ FK+FSR LK
Sbjct: 293 LGLENKFYIEEKMDGDRMLLHKDGDSFKFFSRRLK 327
>gi|16082164|ref|NP_394605.1| ATP-dependent DNA ligase [Thermoplasma acidophilum DSM 1728]
gi|14423677|sp|Q9HJ26.1|DNLI_THEAC RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|10640459|emb|CAC12273.1| DNA ligase related protein [Thermoplasma acidophilum]
Length = 588
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 9/76 (11%)
Query: 33 SLKPVLEHKAQPVWEISGAEFSQAEIHTA--------DGISIRFPRVT-KIRDDKDWKTA 83
+L+P + V E+ GAE + + IHT G+S+RFPR T K R+DK + +
Sbjct: 507 NLEPDVWFYPAVVMEVIGAEITVSPIHTCAYGEIEKDSGLSVRFPRFTGKWREDKKPEDS 566
Query: 84 TNLPELKVLFKKSKET 99
T E+ ++K+ K+T
Sbjct: 567 TTSREILEMYKEQKKT 582
>gi|393795129|ref|ZP_10378493.1| ATP-dependent DNA ligase I [Candidatus Nitrosoarchaeum limnia BG20]
Length = 590
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%)
Query: 9 SEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTADGISI 66
+E K DGERVQ+H +G++ FSRSL+ + + V +I A + I A+ ++I
Sbjct: 251 AEYKLDGERVQLHIEGDKVVLFSRSLENITSYYPDIVEKIPKAIQANKVILEAEAVAI 308
>gi|390944470|ref|YP_006408231.1| ATP-dependent DNA ligase [Belliella baltica DSM 15883]
gi|390417898|gb|AFL85476.1| ATP-dependent DNA ligase [Belliella baltica DSM 15883]
Length = 530
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 9/78 (11%)
Query: 18 VQVHKKGNEFKYFS--RSLKPVLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIR 75
V + K N + F R++KP L V+EI+ ++ H + GI++RFPR+ + R
Sbjct: 455 VDQYVKKNTLERFGPVRTVKPAL------VFEIAFEGIQESPRHKS-GIALRFPRIQRWR 507
Query: 76 DDKDWKTATNLPELKVLF 93
DK + A NL +LK L
Sbjct: 508 KDKPIEEANNLEDLKALL 525
>gi|337283857|ref|YP_004623331.1| ATP-dependent DNA ligase [Pyrococcus yayanosii CH1]
gi|334899791|gb|AEH24059.1| ATP-dependent DNA ligase [Pyrococcus yayanosii CH1]
Length = 588
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 20/28 (71%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSRSLKPV 37
EIKYDG RVQVHK G+ +SR L+ V
Sbjct: 274 EIKYDGARVQVHKDGDRIIVYSRRLENV 301
>gi|327311493|ref|YP_004338390.1| ATP-dependent DNA ligase [Thermoproteus uzoniensis 768-20]
gi|326947972|gb|AEA13078.1| ATP-dependent DNA ligase [Thermoproteus uzoniensis 768-20]
Length = 594
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 9/77 (11%)
Query: 31 SRSLKPVLEHKAQPVWEISGAEFSQAEIHTA--------DGISIRFPRVT-KIRDDKDWK 81
S ++P + V EI GAE + + +HT G++IRFPR T + R DK +
Sbjct: 507 SSRMEPDVWFTPGVVLEIIGAEITLSPLHTCCLGAVRPDVGLAIRFPRFTGRYRTDKSPE 566
Query: 82 TATNLPELKVLFKKSKE 98
AT + EL ++K K+
Sbjct: 567 EATTVDELLEMYKSQKK 583
>gi|327507709|sp|P0CL74.1|DNLI_PYRAY RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|12054709|emb|CAC20743.1| DNA ligase [Pyrococcus abyssi]
Length = 559
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 20/28 (71%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSRSLKPV 37
EIKYDG RVQVHK G + +SR L+ V
Sbjct: 247 EIKYDGARVQVHKDGEKVTIYSRRLENV 274
>gi|358385739|gb|EHK23335.1| hypothetical protein TRIVIDRAFT_64213 [Trichoderma virens Gv29-8]
Length = 878
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 10/77 (12%)
Query: 27 FKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDK 78
+Y+ S P + + Q VWE++ A+ + + ++TA G+S+RFPR K RDDK
Sbjct: 777 IEYYGPS--PDVWFEPQEVWEMAFADITLSPVYTAAIGLVSDERGLSLRFPRFLKKRDDK 834
Query: 79 DWKTATNLPELKVLFKK 95
A+ L L++K
Sbjct: 835 SIDEASTNEFLANLWRK 851
>gi|197124671|ref|YP_002136622.1| ATP-dependent DNA ligase [Anaeromyxobacter sp. K]
gi|224487901|sp|B4UIS1.1|DNLI_ANASK RecName: Full=Probable DNA ligase; AltName:
Full=Polydeoxyribonucleotide synthase [ATP]
gi|196174520|gb|ACG75493.1| DNA ligase I, ATP-dependent Dnl1 [Anaeromyxobacter sp. K]
Length = 513
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 15/28 (53%), Positives = 20/28 (71%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSRSLKPV 37
E K DG R+Q H+ G+E + FSRSL+ V
Sbjct: 213 EWKLDGARIQAHRDGDEVRVFSRSLREV 240
>gi|14520759|ref|NP_126234.1| ATP-dependent DNA ligase [Pyrococcus abyssi GE5]
gi|327507708|sp|P0CL75.1|DNLI_PYRAB RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|5457975|emb|CAB49465.1| lig DNA ligase [Pyrococcus abyssi GE5]
gi|380741298|tpe|CCE69932.1| TPA: ATP-dependent DNA ligase [Pyrococcus abyssi GE5]
Length = 559
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 20/28 (71%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSRSLKPV 37
EIKYDG RVQVHK G + +SR L+ V
Sbjct: 247 EIKYDGARVQVHKDGEKVTIYSRRLENV 274
>gi|347840149|emb|CCD54721.1| hypothetical protein [Botryotinia fuckeliana]
Length = 923
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 11/67 (16%)
Query: 45 VWEISGAEFSQAEIHTAD-----------GISIRFPRVTKIRDDKDWKTATNLPELKVLF 93
VWE+ A+ + + + A GIS+RFPR KIRDDK AT+ ++ ++
Sbjct: 844 VWEVKTADLTLSPRYKAGCKEGVDKGGERGISLRFPRFIKIRDDKKPDMATSSRQVAEMY 903
Query: 94 KKSKETS 100
+K + +
Sbjct: 904 RKQESVT 910
>gi|154294102|ref|XP_001547494.1| hypothetical protein BC1G_14121 [Botryotinia fuckeliana B05.10]
Length = 919
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 11/67 (16%)
Query: 45 VWEISGAEFSQAEIHTAD-----------GISIRFPRVTKIRDDKDWKTATNLPELKVLF 93
VWE+ A+ + + + A GIS+RFPR KIRDDK AT+ ++ ++
Sbjct: 840 VWEVKTADLTLSPRYKAGCKEGVDKGGERGISLRFPRFIKIRDDKKPDMATSSRQVAEMY 899
Query: 94 KKSKETS 100
+K + +
Sbjct: 900 RKQESVT 906
>gi|1706484|sp|P54875.1|DNLI_METTF RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|1279773|gb|AAC44823.1| DNA ligase [Methanothermobacter thermautotrophicus]
Length = 557
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 15/32 (46%), Positives = 22/32 (68%)
Query: 6 RCYSEIKYDGERVQVHKKGNEFKYFSRSLKPV 37
R + E KYDG RVQ+H+ G+E F+R L+ +
Sbjct: 245 RAFCETKYDGIRVQIHRCGDEVSIFTRRLENI 276
>gi|112490160|pdb|2CFM|A Chain A, Atp-Dependent Dna Ligase From Pyrococcus Furiosus
Length = 561
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 21/28 (75%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSRSLKPV 37
EIKYDG RVQVHK G++ +SR L+ V
Sbjct: 247 EIKYDGARVQVHKDGSKIIVYSRRLENV 274
Score = 34.7 bits (78), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 14/93 (15%)
Query: 15 GERVQVHKKGNEFK-----YFSRSLKP-VLEHKAQPVW-------EISGAEFSQAEIHTA 61
GE ++V K G+ F F++ LKP +++ + + VW E++ E ++ + +
Sbjct: 459 GEFLEVGKVGSGFTDDDLVEFTKXLKPLIIKEEGKRVWLQPKVVIEVTYQEIQKSPKYRS 518
Query: 62 DGISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
G ++RFPR +RDDK + A + + L++
Sbjct: 519 -GFALRFPRFVALRDDKGPEDADTIERIAQLYE 550
>gi|332295117|ref|YP_004437040.1| DNA ligase [Thermodesulfobium narugense DSM 14796]
gi|332178220|gb|AEE13909.1| DNA ligase [Thermodesulfobium narugense DSM 14796]
Length = 624
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 55/119 (46%), Gaps = 18/119 (15%)
Query: 6 RCYSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEI--SGAEFSQAEIHTADG 63
+C E KYDG R QVHK G++ K +SR+ LE EI S ++ +A+ +G
Sbjct: 248 KCIVEPKYDGFRCQVHKIGDKVKIYSRN----LEDNTHMFPEIVESTIKYCRAKNCIFEG 303
Query: 64 ISIRF-PR----------VTKIRDDKDWKTATNLP-ELKVLFKKSKETSDFTLKPKYDR 110
+I F P+ V + R K A P L+V K+ D T KP ++R
Sbjct: 304 EAISFDPKTLRFMPFQITVQRKRKHNILKVAAKFPLRLEVFDLLYKDDLDITSKPLFER 362
>gi|171686862|ref|XP_001908372.1| hypothetical protein [Podospora anserina S mat+]
gi|170943392|emb|CAP69045.1| unnamed protein product [Podospora anserina S mat+]
Length = 957
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 11/67 (16%)
Query: 45 VWEISGAEFSQAEIHTAD-----------GISIRFPRVTKIRDDKDWKTATNLPELKVLF 93
VWE+ A+ + + + A GIS+RFPR K+RDDK AT+ ++ ++
Sbjct: 878 VWEVKTADLTLSPRYKAGMKEGVDPTGEKGISLRFPRFIKVRDDKKPDEATSSRQVAEMY 937
Query: 94 KKSKETS 100
+K + S
Sbjct: 938 RKQESVS 944
>gi|242763727|ref|XP_002340632.1| DNA ligase, putative [Talaromyces stipitatus ATCC 10500]
gi|218723828|gb|EED23245.1| DNA ligase, putative [Talaromyces stipitatus ATCC 10500]
Length = 1014
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
Query: 63 GISIRFPRVTKIRDDKDWKTATNLPE---LKVLFKKSKETSDFTL 104
G+++RFPR K+R DKDWK+A ++ E LK +K ++ FT+
Sbjct: 638 GLTLRFPRFKKLRMDKDWKSALSVQEFLDLKSNVEKEQKEKQFTV 682
>gi|120609078|ref|YP_968756.1| ATP-dependent DNA ligase [Acidovorax citrulli AAC00-1]
gi|120587542|gb|ABM30982.1| ATP dependent DNA ligase [Acidovorax citrulli AAC00-1]
Length = 566
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 7/65 (10%)
Query: 32 RSLKPVLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKV 91
RS+KP L V+E+ +++ H + GI++RFPR+ + R+DK + A +L L+
Sbjct: 507 RSVKPTL------VFELGFEGIARSARHKS-GIAVRFPRMLRWREDKPVEEADSLETLEA 559
Query: 92 LFKKS 96
L +S
Sbjct: 560 LLPRS 564
>gi|448627570|ref|ZP_21672036.1| DNA ligase [Haloarcula vallismortis ATCC 29715]
gi|445758878|gb|EMA10174.1| DNA ligase [Haloarcula vallismortis ATCC 29715]
Length = 553
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 33/122 (27%), Positives = 54/122 (44%), Gaps = 12/122 (9%)
Query: 5 ERCYSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIH----- 59
+R E KYDG RVQVH G + + FSR+++ V + + V + + A +
Sbjct: 247 DRAAVEWKYDGARVQVHFDGEDARLFSRNMEEVTDPLPEVVDTVESTLDAPAILDGEVVA 306
Query: 60 -TADGISIRFPRV-TKIRDDKD-----WKTATNLPELKVLFKKSKETSDFTLKPKYDRIK 112
ADG + F V + R D A L L ++ D L+ ++DR++
Sbjct: 307 VDADGEPLPFQEVLRRFRRKHDVAAARENVAVRLHAFDCLHADGEDLLDAPLETRHDRLE 366
Query: 113 NL 114
+L
Sbjct: 367 SL 368
>gi|323355897|gb|EGA87709.1| Cdc9p [Saccharomyces cerevisiae VL3]
Length = 690
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 6/71 (8%)
Query: 30 FSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD------GISIRFPRVTKIRDDKDWKTA 83
F S +P + + ++E+ A+ S + I+ A G+S+RFPR +IR+DK + A
Sbjct: 613 FDSSAEPDVWFEPTTLFEVLTADLSLSPIYKAGSATFDKGVSLRFPRFLRIREDKGVEDA 672
Query: 84 TNLPELKVLFK 94
T+ ++ L++
Sbjct: 673 TSSDQIVELYE 683
>gi|147767218|emb|CAN66728.1| hypothetical protein VITISV_041957 [Vitis vinifera]
Length = 272
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 8/83 (9%)
Query: 29 YFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDW 80
Y+ + P + + +WEI GA+F+ + +H A GIS+RFPR + D+
Sbjct: 187 YYQTAELPDMWFTPELIWEIRGADFTVSPVHQAAIGLVHPSRGISVRFPRFIRPIMDRRP 246
Query: 81 KTATNLPELKVLFKKSKETSDFT 103
+ + ++ +F D T
Sbjct: 247 EECSTAADIADMFHSQTRKMDVT 269
>gi|57642075|ref|YP_184553.1| ATP-dependent DNA ligase [Thermococcus kodakarensis KOD1]
gi|10566815|dbj|BAB15949.1| DNA ligase [Thermococcus kodakaraensis]
gi|57160399|dbj|BAD86329.1| ATP-dependent DNA ligase [Thermococcus kodakarensis KOD1]
Length = 562
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 21/28 (75%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSRSLKPV 37
EIKYDG RVQVHK G++ +SR L+ V
Sbjct: 250 EIKYDGARVQVHKDGDKVIVYSRRLENV 277
>gi|15222077|ref|NP_175351.1| ATP-dependent DNA ligase [Arabidopsis thaliana]
gi|332194289|gb|AEE32410.1| ATP-dependent DNA ligase [Arabidopsis thaliana]
Length = 657
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 8/61 (13%)
Query: 45 VWEISGAEFSQAEIH-----TAD---GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
VWE+ A+ + + ++ D GIS+RFPR+ +IR DK+ + AT ++ +++
Sbjct: 584 VWEVKAADLTVSPVYREAIGIVDPDKGISLRFPRLVRIRKDKNPEEATTSDQIAEMYQAQ 643
Query: 97 K 97
K
Sbjct: 644 K 644
>gi|310791967|gb|EFQ27494.1| DNA ligase I [Glomerella graminicola M1.001]
Length = 869
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 9/89 (10%)
Query: 15 GERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISI 66
G+R+ + F +S +P + + Q VWE++ A+ + + +TA G+S+
Sbjct: 763 GDRINTRTQKPAFVEYSGP-EPDVWFEPQEVWEMAFADITLSPTYTAAIGLVSEDRGLSL 821
Query: 67 RFPRVTKIRDDKDWKTATNLPELKVLFKK 95
RFPR K R+DK A+ L L++K
Sbjct: 822 RFPRFLKKREDKSMDEASTNEFLAGLWRK 850
>gi|242763732|ref|XP_002340633.1| DNA ligase, putative [Talaromyces stipitatus ATCC 10500]
gi|218723829|gb|EED23246.1| DNA ligase, putative [Talaromyces stipitatus ATCC 10500]
Length = 736
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
Query: 63 GISIRFPRVTKIRDDKDWKTATNLPE---LKVLFKKSKETSDFTL 104
G+++RFPR K+R DKDWK+A ++ E LK +K ++ FT+
Sbjct: 638 GLTLRFPRFKKLRMDKDWKSALSVQEFLDLKSNVEKEQKEKQFTV 682
>gi|297735473|emb|CBI17913.3| unnamed protein product [Vitis vinifera]
Length = 1163
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%), Gaps = 3/31 (9%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSRSLKPVLEH 40
E K+DG+R+Q+HK G E +FSR+ L+H
Sbjct: 250 ECKFDGDRIQIHKNGEEIHFFSRNF---LDH 277
>gi|225445943|ref|XP_002263967.1| PREDICTED: DNA ligase 4-like [Vitis vinifera]
Length = 1162
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%), Gaps = 3/31 (9%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSRSLKPVLEH 40
E K+DG+R+Q+HK G E +FSR+ L+H
Sbjct: 250 ECKFDGDRIQIHKNGEEIHFFSRNF---LDH 277
>gi|240277520|gb|EER41028.1| ATP-dependent DNA ligase domain-containing protein [Ajellomyces
capsulatus H143]
Length = 1086
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 45 VWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVL 92
V E+ G+ F + A+ ++RFPRV KI D+D + AT L EL+VL
Sbjct: 594 VVEMVGSGFEKPA--GANYFTLRFPRVLKIHMDRDVEDATTLEELQVL 639
>gi|448649282|ref|ZP_21679995.1| DNA ligase [Haloarcula californiae ATCC 33799]
gi|445773926|gb|EMA24955.1| DNA ligase [Haloarcula californiae ATCC 33799]
Length = 554
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 34/126 (26%), Positives = 55/126 (43%), Gaps = 20/126 (15%)
Query: 5 ERCYSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQA----EIHT 60
+R E KYDG RVQVH G + + FSR+++ V + + V + + A E+
Sbjct: 248 DRAAVEWKYDGARVQVHFDGEDARLFSRNMEEVTDPLPEVVETVESTLDAPAILDGEVVA 307
Query: 61 ADG---------ISIRFPR---VTKIRDDKDWKTATNLPELKVLFKKSKETSDFTLKPKY 108
D + RF R V R+D A L L ++ D L+ ++
Sbjct: 308 VDNGGDPLPFQEVLRRFRRKHDVAAARED----VAVRLHAFDCLHAAGEDLLDAALETRH 363
Query: 109 DRIKNL 114
DR+++L
Sbjct: 364 DRLESL 369
>gi|425772167|gb|EKV10581.1| DNA ligase 4 [Penicillium digitatum Pd1]
gi|425777342|gb|EKV15520.1| DNA ligase 4 [Penicillium digitatum PHI26]
Length = 974
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 21/27 (77%)
Query: 63 GISIRFPRVTKIRDDKDWKTATNLPEL 89
G+++RFPR K+R DKDWK+A ++ E
Sbjct: 610 GLTLRFPRFKKLRKDKDWKSALSVQEF 636
>gi|406965132|gb|EKD90803.1| hypothetical protein ACD_30C00089G0001 [uncultured bacterium]
Length = 145
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 13/94 (13%)
Query: 14 DGERVQVHKKGNEFKY------FSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD----- 62
D E ++HK+ ++ K + + P + + V EI E +++ HTA
Sbjct: 47 DEEWREIHKRADKIKVNKKPARINSIMTPSVWIAPEIVIEILADEITRSPTHTAGKDETG 106
Query: 63 -GISIRFPRVTKIRD-DKDWKTATNLPELKVLFK 94
G ++RFPR+ K R+ DK + AT + ELK ++K
Sbjct: 107 VGYALRFPRLVKFREKDKQAEDATTVKELKEMYK 140
>gi|296809888|ref|XP_002845282.1| DNA ligase 4 [Arthroderma otae CBS 113480]
gi|238842670|gb|EEQ32332.1| DNA ligase 4 [Arthroderma otae CBS 113480]
Length = 1001
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
Query: 63 GISIRFPRVTKIRDDKDWKTATNLPE---LKVLFKKSKETSDFTL 104
G+++RFPR ++R DKDWK+A ++ E LK ++ ++ DF +
Sbjct: 634 GLTVRFPRFKRLRMDKDWKSALSIQEFMDLKAGAEQERKEKDFQV 678
>gi|164422739|ref|XP_958945.2| hypothetical protein NCU09706 [Neurospora crassa OR74A]
gi|157069800|gb|EAA29709.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 853
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 9/90 (10%)
Query: 14 DGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GIS 65
DGE VH F ++ P + + Q VWE++ A+ + + +TA G+S
Sbjct: 729 DGEPKNVHVAKPGFVEYAGG-NPDVWFEPQEVWEVAFADITISPTYTAAIGLVREDKGLS 787
Query: 66 IRFPRVTKIRDDKDWKTATNLPELKVLFKK 95
+RFPR + R+DK + A+ L L++K
Sbjct: 788 LRFPRFLRKREDKGIEEASTSDFLAGLWRK 817
>gi|7594511|emb|CAA64457.2| ATP-dependent DNA ligase [Candida albicans]
Length = 928
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 1 MAKNERCYSEIKYDGERVQVHKKGNEFKYFSRSLK 35
+ + Y E K DG+R+ +HK G+ FK+FSR LK
Sbjct: 293 LGLENKFYIEEKMDGDRMLLHKDGDSFKFFSRRLK 327
>gi|261403774|ref|YP_003247998.1| ATP-dependent DNA ligase I [Methanocaldococcus vulcanius M7]
gi|261370767|gb|ACX73516.1| DNA ligase I, ATP-dependent Dnl1 [Methanocaldococcus vulcanius M7]
Length = 573
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 21/28 (75%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSRSLKPV 37
E KYDG RVQ+HK G++ K +SR L+ V
Sbjct: 248 ETKYDGARVQIHKGGDKVKIYSRRLEDV 275
>gi|452004944|gb|EMD97400.1| hypothetical protein COCHEDRAFT_1124878 [Cochliobolus
heterostrophus C5]
Length = 921
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 8/59 (13%)
Query: 28 KYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDK 78
KY + P + + Q VWE++ A+ + + +TA G+S RFPR ++R+DK
Sbjct: 823 KYNGGAGTPAVWFEPQEVWEVAFADLTLSPTYTAAIGLVSDERGLSTRFPRFLRVREDK 881
>gi|238882098|gb|EEQ45736.1| hypothetical protein CAWG_04070 [Candida albicans WO-1]
Length = 928
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 1 MAKNERCYSEIKYDGERVQVHKKGNEFKYFSRSLK 35
+ + Y E K DG+R+ +HK G+ FK+FSR LK
Sbjct: 293 LGLENKFYIEEKMDGDRMLLHKDGDSFKFFSRRLK 327
>gi|207347088|gb|EDZ73389.1| YDL164Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 755
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 6/71 (8%)
Query: 30 FSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD------GISIRFPRVTKIRDDKDWKTA 83
F S +P + + ++E+ A+ S + I+ A G+S+RFPR +IR+DK + A
Sbjct: 678 FDSSAEPDVWFEPTTLFEVLTADLSLSPIYKAGSATFDKGVSLRFPRFLRIREDKGVEDA 737
Query: 84 TNLPELKVLFK 94
T+ ++ L++
Sbjct: 738 TSSDQIVELYE 748
>gi|14423676|sp|Q9HHC4.2|DNLI_PYRKO RecName: Full=DNA ligase; AltName: Full=Lig(Tk); AltName:
Full=Polydeoxyribonucleotide synthase [ATP]
Length = 559
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 21/28 (75%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSRSLKPV 37
EIKYDG RVQVHK G++ +SR L+ V
Sbjct: 247 EIKYDGARVQVHKDGDKVIVYSRRLENV 274
>gi|6320038|ref|NP_010117.1| DNA ligase (ATP) CDC9 [Saccharomyces cerevisiae S288c]
gi|2506361|sp|P04819.2|DNLI1_YEAST RecName: Full=DNA ligase 1; AltName: Full=DNA ligase I; AltName:
Full=Polydeoxyribonucleotide synthase [ATP] 1; Flags:
Precursor
gi|1061275|emb|CAA91582.1| DNA ligase [Saccharomyces cerevisiae]
gi|1431259|emb|CAA98737.1| CDC9 [Saccharomyces cerevisiae]
gi|51830214|gb|AAU09681.1| YDL164C [Saccharomyces cerevisiae]
gi|151941840|gb|EDN60196.1| DNA ligase [Saccharomyces cerevisiae YJM789]
gi|256273587|gb|EEU08520.1| Cdc9p [Saccharomyces cerevisiae JAY291]
gi|259145080|emb|CAY78344.1| Cdc9p [Saccharomyces cerevisiae EC1118]
gi|285810873|tpg|DAA11697.1| TPA: DNA ligase (ATP) CDC9 [Saccharomyces cerevisiae S288c]
gi|349576917|dbj|GAA22086.1| K7_Cdc9p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 755
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 6/71 (8%)
Query: 30 FSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD------GISIRFPRVTKIRDDKDWKTA 83
F S +P + + ++E+ A+ S + I+ A G+S+RFPR +IR+DK + A
Sbjct: 678 FDSSAEPDVWFEPTTLFEVLTADLSLSPIYKAGSATFDKGVSLRFPRFLRIREDKGVEDA 737
Query: 84 TNLPELKVLFK 94
T+ ++ L++
Sbjct: 738 TSSDQIVELYE 748
>gi|320583128|gb|EFW97344.1| DNA ligase [Ogataea parapolymorpha DL-1]
Length = 706
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 37/65 (56%), Gaps = 9/65 (13%)
Query: 45 VWEISGAEFSQAEIH---------TADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKK 95
++E+ A+F+++ ++ + G+S+RFPR +IRDDK + AT ++ +++K
Sbjct: 642 LFEVKVADFTESPLYKCGYSYLGDGSKGVSLRFPRFVRIRDDKSVEDATTSEQIVEMYEK 701
Query: 96 SKETS 100
S
Sbjct: 702 QAHLS 706
>gi|315231717|ref|YP_004072153.1| ATP-dependent DNA ligase [Thermococcus barophilus MP]
gi|315184745|gb|ADT84930.1| ATP-dependent DNA ligase [Thermococcus barophilus MP]
Length = 561
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 21/28 (75%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSRSLKPV 37
EIKYDG RVQVHK G++ +SR L+ V
Sbjct: 248 EIKYDGARVQVHKDGDKVIIYSRRLENV 275
>gi|190405162|gb|EDV08429.1| DNA ligase [Saccharomyces cerevisiae RM11-1a]
Length = 755
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 6/71 (8%)
Query: 30 FSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD------GISIRFPRVTKIRDDKDWKTA 83
F S +P + + ++E+ A+ S + I+ A G+S+RFPR +IR+DK + A
Sbjct: 678 FDSSAEPDVWFEPTTLFEVLTADLSLSPIYKAGSATFDKGVSLRFPRFLRIREDKGVEDA 737
Query: 84 TNLPELKVLFK 94
T+ ++ L++
Sbjct: 738 TSSEQIVELYE 748
>gi|156033275|ref|XP_001585474.1| hypothetical protein SS1G_13713 [Sclerotinia sclerotiorum 1980]
gi|154699116|gb|EDN98854.1| hypothetical protein SS1G_13713 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 914
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 11/67 (16%)
Query: 45 VWEISGAEFSQAEIHTAD-----------GISIRFPRVTKIRDDKDWKTATNLPELKVLF 93
VWE+ A+ + + + A GIS+RFPR KIRDDK AT+ ++ ++
Sbjct: 835 VWEVKTADLTLSPRYKAGCKEGVDKGGEKGISLRFPRFIKIRDDKKPDMATSSRQVAEMY 894
Query: 94 KKSKETS 100
+K + +
Sbjct: 895 RKQESVT 901
>gi|68481400|ref|XP_715339.1| dsDNA break repair ligase [Candida albicans SC5314]
gi|68481531|ref|XP_715274.1| dsDNA break repair ligase [Candida albicans SC5314]
gi|205371792|sp|P52496.3|DNLI4_CANAL RecName: Full=DNA ligase 4; Short=CaLIG4; AltName: Full=DNA ligase
IV; AltName: Full=Polydeoxyribonucleotide synthase [ATP]
4
gi|46436890|gb|EAK96245.1| dsDNA break repair ligase [Candida albicans SC5314]
gi|46436958|gb|EAK96312.1| dsDNA break repair ligase [Candida albicans SC5314]
Length = 928
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 1 MAKNERCYSEIKYDGERVQVHKKGNEFKYFSRSLK 35
+ + Y E K DG+R+ +HK G+ FK+FSR LK
Sbjct: 293 LGLENKFYIEEKMDGDRMLLHKDGDSFKFFSRRLK 327
>gi|448112033|ref|XP_004201992.1| Piso0_001463 [Millerozyma farinosa CBS 7064]
gi|359464981|emb|CCE88686.1| Piso0_001463 [Millerozyma farinosa CBS 7064]
Length = 759
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 9/54 (16%)
Query: 45 VWEISGAEFSQAEIHTA------DGISIRFPRVTKIRDDK---DWKTATNLPEL 89
V+E+ A+ S + I+ A GIS+RFPR ++RDDK D T+T++ E
Sbjct: 698 VFEVLTADLSLSPIYKAAFQQYGKGISLRFPRFIRVRDDKGVEDATTSTDVSEF 751
>gi|325093600|gb|EGC46910.1| ATP-dependent DNA ligase [Ajellomyces capsulatus H88]
Length = 1087
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 45 VWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVL 92
V E+ G+ F + A+ ++RFPRV KI D+D + AT L EL+VL
Sbjct: 606 VVEMVGSGFEKPA--GANYFTLRFPRVLKIHMDRDVEDATTLEELQVL 651
>gi|3515|emb|CAA27005.1| unnamed protein product [Saccharomyces cerevisiae]
Length = 755
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 6/71 (8%)
Query: 30 FSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD------GISIRFPRVTKIRDDKDWKTA 83
F S +P + + ++E+ A+ S + I+ A G+S+RFPR +IR+DK + A
Sbjct: 678 FDSSAEPDVWFEPTTLFEVLTADLSLSPIYKAGSATFDKGVSLRFPRFLRIREDKGVEDA 737
Query: 84 TNLPELKVLFK 94
T+ ++ L++
Sbjct: 738 TSSDQIVELYE 748
>gi|448114611|ref|XP_004202619.1| Piso0_001463 [Millerozyma farinosa CBS 7064]
gi|359383487|emb|CCE79403.1| Piso0_001463 [Millerozyma farinosa CBS 7064]
Length = 759
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 6/57 (10%)
Query: 45 VWEISGAEFSQAEIHTA------DGISIRFPRVTKIRDDKDWKTATNLPELKVLFKK 95
V+E+ A+ S + I+ A GIS+RFPR ++RDDK + AT+ ++ +++
Sbjct: 698 VFEVLTADLSLSPIYKAAFQQYGKGISLRFPRFIRVRDDKGVEDATSSTDVSEFYER 754
>gi|225556975|gb|EEH05262.1| ATP-dependent DNA ligase domain-containing protein [Ajellomyces
capsulatus G186AR]
Length = 1087
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 45 VWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVL 92
V E+ G+ F + A+ ++RFPRV KI D+D + AT L EL+VL
Sbjct: 606 VVEMVGSGFEKPA--GANYFTLRFPRVLKIHMDRDVEDATTLEELQVL 651
>gi|241951070|ref|XP_002418257.1| dna ligase, putative; polydeoxyribonucleotide synthase [atp],
putative [Candida dubliniensis CD36]
gi|223641596|emb|CAX43557.1| dna ligase, putative [Candida dubliniensis CD36]
Length = 928
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 1 MAKNERCYSEIKYDGERVQVHKKGNEFKYFSRSLK 35
+ + Y E K DG+R+ +HK G+ FK+FSR LK
Sbjct: 293 LGLENKFYIEEKMDGDRMLLHKDGDSFKFFSRRLK 327
>gi|399216058|emb|CCF72746.1| unnamed protein product [Babesia microti strain RI]
Length = 787
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 17/71 (23%)
Query: 31 SRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD-----------------GISIRFPRVTK 73
S ++P + + + VWE ++FS + +HTA GI +RFPR +
Sbjct: 701 SDKMEPDIWFEPKKVWECKVSDFSLSPVHTASIGTIESDKVCVYWYTTFGIGMRFPRFVR 760
Query: 74 IRDDKDWKTAT 84
+R+DK+ A+
Sbjct: 761 VREDKEIYQAS 771
>gi|384105891|ref|ZP_10006805.1| ATP-dependent DNA ligase [Rhodococcus imtechensis RKJ300]
gi|383834809|gb|EID74241.1| ATP-dependent DNA ligase [Rhodococcus imtechensis RKJ300]
Length = 503
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 13/28 (46%), Positives = 21/28 (75%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSRSLKPV 37
E K DG R+QVH+ G+E + F+R+L+ +
Sbjct: 210 EYKLDGARIQVHRNGDEVRIFTRTLREI 237
>gi|365766695|gb|EHN08190.1| Cdc9p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 732
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 6/71 (8%)
Query: 30 FSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD------GISIRFPRVTKIRDDKDWKTA 83
F S +P + + ++E+ A+ S + I+ A G+S+RFPR +IR+DK + A
Sbjct: 655 FDSSAEPDVWFEPTTLFEVLTADLSLSPIYKAGSATFDKGVSLRFPRFLRIREDKGVEDA 714
Query: 84 TNLPELKVLFK 94
T+ ++ L++
Sbjct: 715 TSSDQIVELYE 725
>gi|424862232|ref|ZP_18286178.1| DNA polymerase LigD, ligase domain-containing protein [Rhodococcus
opacus PD630]
gi|356660704|gb|EHI41068.1| DNA polymerase LigD, ligase domain-containing protein [Rhodococcus
opacus PD630]
Length = 503
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 13/28 (46%), Positives = 21/28 (75%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSRSLKPV 37
E K DG R+QVH+ G+E + F+R+L+ +
Sbjct: 210 EYKLDGARIQVHRNGDEVRIFTRTLREI 237
>gi|226360758|ref|YP_002778536.1| ATP-dependent DNA ligase [Rhodococcus opacus B4]
gi|254778145|sp|C1AX87.1|DNLI_RHOOB RecName: Full=Probable DNA ligase; AltName:
Full=Polydeoxyribonucleotide synthase [ATP]
gi|226239243|dbj|BAH49591.1| ATP-dependent DNA ligase LigB [Rhodococcus opacus B4]
Length = 503
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 13/28 (46%), Positives = 21/28 (75%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSRSLKPV 37
E K DG R+QVH+ G+E + F+R+L+ +
Sbjct: 210 EYKLDGARIQVHRNGDEVRIFTRTLREI 237
>gi|452848459|gb|EME50391.1| hypothetical protein DOTSEDRAFT_145234 [Dothistroma septosporum
NZE10]
Length = 935
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 44 PVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKSKETSDFT 103
P + + +EF H G+S+RFPR ++RDDK+ + AT+ ++ ++ +++E+
Sbjct: 868 PRYRAASSEFGNDGTHK--GVSLRFPRFIRVRDDKNAEQATSSRQVAEMY-RAQESVGKE 924
Query: 104 LKPKYD 109
KP D
Sbjct: 925 KKPAAD 930
>gi|212224666|ref|YP_002307902.1| ATP-dependent DNA ligase [Thermococcus onnurineus NA1]
gi|83338493|gb|ABC11973.1| thermostable DNA ligase [Thermococcus onnurineus NA1]
gi|212009623|gb|ACJ17005.1| thermostable DNA ligase [Thermococcus onnurineus NA1]
Length = 562
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 20/28 (71%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSRSLKPV 37
EIKYDG RVQVHK G+ +SR L+ V
Sbjct: 250 EIKYDGARVQVHKDGDRVVIYSRRLENV 277
>gi|326315263|ref|YP_004232935.1| ATP dependent DNA ligase [Acidovorax avenae subsp. avenae ATCC
19860]
gi|323372099|gb|ADX44368.1| ATP dependent DNA ligase [Acidovorax avenae subsp. avenae ATCC
19860]
Length = 566
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 7/65 (10%)
Query: 32 RSLKPVLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKV 91
RS+KP L V+E+ +++ H + GI++RFPR+ + R+DK + A +L L+
Sbjct: 507 RSVKPTL------VFELGFEGIARSARHKS-GIAVRFPRMLRWREDKPVEEADSLETLEA 559
Query: 92 LFKKS 96
L +S
Sbjct: 560 LLPRS 564
>gi|448640231|ref|ZP_21677285.1| DNA ligase [Haloarcula sinaiiensis ATCC 33800]
gi|445762021|gb|EMA13255.1| DNA ligase [Haloarcula sinaiiensis ATCC 33800]
Length = 554
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 34/126 (26%), Positives = 55/126 (43%), Gaps = 20/126 (15%)
Query: 5 ERCYSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQA----EIHT 60
+R E KYDG RVQVH G + + FSR+++ V + + V + + A E+
Sbjct: 248 DRAAVEWKYDGARVQVHFDGEDARLFSRNMEEVTDPLPEVVETVESTLDAPAILDGEVVA 307
Query: 61 ADG---------ISIRFPR---VTKIRDDKDWKTATNLPELKVLFKKSKETSDFTLKPKY 108
D + RF R V R+D A L L ++ D L+ ++
Sbjct: 308 VDNGGDPLPFQEVLRRFRRKHDVAAARED----VAVRLHAFDCLHAAGEDLLDAALETRH 363
Query: 109 DRIKNL 114
DR+++L
Sbjct: 364 DRLESL 369
>gi|443900400|dbj|GAC77726.1| hypothetical protein PANT_27d00090 [Pseudozyma antarctica T-34]
Length = 1004
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 9/74 (12%)
Query: 33 SLKPVLEHKAQPVWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDWKTAT 84
+L P + + VWEI GA+ + + +TA G+SIRFPR + R+DK + A+
Sbjct: 903 NLFPDVWWRPSEVWEIRGADVTVSPNYTAAIGLVNEERGLSIRFPRFMRRREDKTVEQAS 962
Query: 85 NLPEL-KVLFKKSK 97
L K+ F++ K
Sbjct: 963 TPAMLAKMYFEQQK 976
>gi|392300662|gb|EIW11753.1| Cdc9p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 732
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 6/71 (8%)
Query: 30 FSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD------GISIRFPRVTKIRDDKDWKTA 83
F S +P + + ++E+ A+ S + I+ A G+S+RFPR +IR+DK + A
Sbjct: 655 FDSSAEPDVWFEPTTLFEVLTADLSLSPIYKAGSATFDKGVSLRFPRFLRIREDKGVEDA 714
Query: 84 TNLPELKVLFK 94
T+ ++ L++
Sbjct: 715 TSSDQIVELYE 725
>gi|410670023|ref|YP_006922394.1| DNA ligase I, ATP-dependent Dnl1 [Methanolobus psychrophilus R15]
gi|409169151|gb|AFV23026.1| DNA ligase I, ATP-dependent Dnl1 [Methanolobus psychrophilus R15]
Length = 574
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 38 LEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKSK 97
+E K Q ++E++ E Q + G ++RFPR+ +RDDK + + L+ +++ +
Sbjct: 502 IELKPQVIFEVAFEEI-QKSTNYESGYALRFPRLVNVRDDKSLEDVETIGRLEEMYRLQR 560
Query: 98 E 98
E
Sbjct: 561 E 561
>gi|358398200|gb|EHK47558.1| hypothetical protein TRIATDRAFT_133844 [Trichoderma atroviride IMI
206040]
Length = 873
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 11/67 (16%)
Query: 45 VWEISGAEFSQAEIHTAD-----------GISIRFPRVTKIRDDKDWKTATNLPELKVLF 93
VWE+ A+ + + + A GIS+RFPR KIRDDK AT+ ++ ++
Sbjct: 794 VWEVKTADLTLSPRYKAGWKEGVDPAGEKGISLRFPRFIKIRDDKKPNEATSSRQVAEMY 853
Query: 94 KKSKETS 100
+K + +
Sbjct: 854 RKQESVT 860
>gi|315498376|ref|YP_004087180.1| ATP dependent DNA ligase [Asticcacaulis excentricus CB 48]
gi|315416388|gb|ADU13029.1| ATP dependent DNA ligase [Asticcacaulis excentricus CB 48]
Length = 525
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 33 SLKPVLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVL 92
S PV E K + V+E++ ++++ H + G ++RFPR+++IR DK + A +L L+ L
Sbjct: 463 SFGPVREVKKELVFEVAFDAVNRSKRHKS-GYALRFPRISRIRWDKPAQEADHLSILEPL 521
>gi|449301934|gb|EMC97943.1| hypothetical protein BAUCODRAFT_120861 [Baudoinia compniacensis
UAMH 10762]
Length = 976
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 64 ISIRFPRVTKIRDDKDWKTATNLPELKVLFKKSK 97
+++RFPR KIR DKDWK+A ++ E L ++++
Sbjct: 633 VTLRFPRFKKIRTDKDWKSALSVHEFNSLKQRAE 666
>gi|390961360|ref|YP_006425194.1| ATP-dependent DNA ligase [Thermococcus sp. CL1]
gi|390519668|gb|AFL95400.1| ATP-dependent DNA ligase [Thermococcus sp. CL1]
Length = 559
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 20/28 (71%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSRSLKPV 37
EIKYDG RVQVHK G+ +SR L+ V
Sbjct: 247 EIKYDGARVQVHKDGDRVVIYSRRLENV 274
>gi|345568495|gb|EGX51389.1| hypothetical protein AOL_s00054g459 [Arthrobotrys oligospora ATCC
24927]
Length = 979
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 26/36 (72%), Gaps = 3/36 (8%)
Query: 63 GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKSKE 98
G+++RFPR TK+R+D+ W +A +L E F++ +E
Sbjct: 624 GLTLRFPRFTKLREDRSWNSALSLNE---FFRRKRE 656
>gi|288818769|ref|YP_003433117.1| DNA ligase [Hydrogenobacter thermophilus TK-6]
gi|384129518|ref|YP_005512131.1| ATP-dependent DNA ligase I [Hydrogenobacter thermophilus TK-6]
gi|288788169|dbj|BAI69916.1| DNA ligase [Hydrogenobacter thermophilus TK-6]
gi|308752355|gb|ADO45838.1| DNA ligase I, ATP-dependent Dnl1 [Hydrogenobacter thermophilus
TK-6]
Length = 572
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 6 RCYSEIKYDGERVQVHKKGNEFKYFSRSLK 35
RC E KYDG R+QVHKK + + +SR+L+
Sbjct: 235 RCAVEAKYDGFRLQVHKKDKDVEIYSRNLE 264
>gi|405978528|gb|EKC42908.1| DNA ligase 4 [Crassostrea gigas]
Length = 619
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 4/39 (10%)
Query: 56 AEIHTAD----GISIRFPRVTKIRDDKDWKTATNLPELK 90
AE+ +D G ++RFPRV K RDDK W +PE++
Sbjct: 270 AEVIDSDKFKTGFTLRFPRVEKFRDDKAWYECMTVPEVQ 308
>gi|20091397|ref|NP_617472.1| DNA ligase (ATP) [Methanosarcina acetivorans C2A]
gi|22256752|sp|Q8TMT1.1|DNLI2_METAC RecName: Full=DNA ligase 2; AltName: Full=Polydeoxyribonucleotide
synthase [ATP] 2
gi|19916535|gb|AAM05952.1| DNA ligase (ATP) [Methanosarcina acetivorans C2A]
Length = 568
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 19/28 (67%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSRSLKPV 37
E K+DG RVQ+HK GN FSR L+ V
Sbjct: 254 EWKFDGARVQIHKNGNSVTLFSRKLENV 281
>gi|402079070|gb|EJT74335.1| DNA ligase 1 [Gaeumannomyces graminis var. tritici R3-111a-1]
Length = 944
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 11/67 (16%)
Query: 45 VWEISGAEFSQA-----------EIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLF 93
VWE+ A+ + + + A GIS+RFPR K+RDDK AT+ ++ ++
Sbjct: 865 VWEVKTADLTLSPRYKAGCGEGVDPAGAKGISLRFPRFIKLRDDKKPDEATSSRQVAEMY 924
Query: 94 KKSKETS 100
+K + S
Sbjct: 925 RKQESVS 931
>gi|322709388|gb|EFZ00964.1| DNA ligase [Metarhizium anisopliae ARSEF 23]
Length = 886
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 11/67 (16%)
Query: 45 VWEISGAEFSQAEIHTAD-----------GISIRFPRVTKIRDDKDWKTATNLPELKVLF 93
VWE+ A+ + + + A GIS+RFPR KIRDDK AT+ ++ ++
Sbjct: 807 VWEVKTADLTLSPRYKAGCKEGVDPAGDKGISLRFPRFIKIRDDKKPDEATSSRQIAEMY 866
Query: 94 KKSKETS 100
+K + +
Sbjct: 867 RKQESVT 873
>gi|340624290|ref|YP_004742743.1| ATP-dependent DNA ligase I [Methanococcus maripaludis X1]
gi|339904558|gb|AEK20000.1| DNA ligase I, ATP-dependent Dnl1 [Methanococcus maripaludis X1]
Length = 573
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 23/39 (58%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEI 48
E KYDG RVQVHK + K +SR L+ + + V EI
Sbjct: 250 ETKYDGARVQVHKSNGDVKIYSRRLENITNSVPELVEEI 288
>gi|167043262|gb|ABZ07968.1| putative DNA ligase N-terminal domain [uncultured marine
crenarchaeote HF4000_ANIW141M12]
Length = 585
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 9 SEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEIS 49
+E K DGERVQ+HK+ N+ FSR L+ + ++ V I
Sbjct: 249 AEYKLDGERVQIHKQANKIILFSRRLENITQYYPDIVENIG 289
>gi|393905637|gb|EFO22713.2| hypothetical protein LOAG_05773 [Loa loa]
Length = 885
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 8/45 (17%)
Query: 8 YSEIKYDGERVQVHKKGN-EFKYFSR-------SLKPVLEHKAQP 44
Y E+KYDGE +H+ + E +Y+SR S+ PVL+H+ P
Sbjct: 289 YVELKYDGEHFLLHRGPSCEMRYYSRVQNDFTNSIAPVLDHRINP 333
>gi|379335286|gb|AFD03270.1| ATP-dependent DNA ligase, partial [uncultured archaeon W4-93a]
Length = 467
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 4 NERCYSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTADG 63
++ +E K DGER Q+H K E K FSRSL+ + + V +I + S I A+
Sbjct: 244 GDKFAAEYKLDGERAQLHMKNGEVKLFSRSLENITSYYPDIVEKIPQSLKSTELIVEAEV 303
Query: 64 ISI 66
++I
Sbjct: 304 VAI 306
>gi|379736274|ref|YP_005329780.1| ATP-dependent DNA ligase [Blastococcus saxobsidens DD2]
gi|378784081|emb|CCG03749.1| ATP-dependent DNA ligase [Blastococcus saxobsidens DD2]
Length = 515
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 22/30 (73%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSRSLKPVLE 39
E K DG RVQVH+ GN+ + ++R+L+ V +
Sbjct: 210 EFKLDGARVQVHRDGNQVRVWTRTLREVTD 239
>gi|312077561|ref|XP_003141358.1| hypothetical protein LOAG_05773 [Loa loa]
Length = 858
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 8/45 (17%)
Query: 8 YSEIKYDGERVQVHKKGN-EFKYFSR-------SLKPVLEHKAQP 44
Y E+KYDGE +H+ + E +Y+SR S+ PVL+H+ P
Sbjct: 262 YVELKYDGEHFLLHRGPSCEMRYYSRVQNDFTNSIAPVLDHRINP 306
>gi|85001053|ref|XP_955245.1| DNA ligase 1 (precursor) [Theileria annulata strain Ankara]
gi|65303391|emb|CAI75769.1| DNA ligase 1 (precursor), putative [Theileria annulata]
Length = 899
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 8/62 (12%)
Query: 31 SRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKT 82
S ++P + + VWE A+ S + ++TA GI +RFPR ++R+DK +
Sbjct: 823 SEKMEPDVWFLPKKVWECKAADLSISPVYTAANRLNASEKGIGLRFPRFLRVREDKKPEE 882
Query: 83 AT 84
AT
Sbjct: 883 AT 884
>gi|403332025|gb|EJY64998.1| DNA ligase 1 [Oxytricha trifallax]
Length = 851
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 8/49 (16%)
Query: 45 VWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATN 85
VWEI A+ S + ++ A GI++RFPR + RDDK + AT+
Sbjct: 778 VWEIKCADLSISPVYCASIGSVEPNRGIALRFPRFIRERDDKQVEDATS 826
>gi|444320241|ref|XP_004180777.1| hypothetical protein TBLA_0E02050 [Tetrapisispora blattae CBS 6284]
gi|387513820|emb|CCH61258.1| hypothetical protein TBLA_0E02050 [Tetrapisispora blattae CBS 6284]
Length = 720
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
Query: 30 FSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD------GISIRFPRVTKIRDDKDWKTA 83
F S +P + V+E+ A+ S + I+ A GIS+RFPR +IR DK A
Sbjct: 643 FDSSAEPDVWFNPTMVFEVLTADLSLSPIYKAGSTVYGKGISLRFPRFIRIRTDKSVNDA 702
Query: 84 TN 85
T+
Sbjct: 703 TS 704
>gi|358058474|dbj|GAA95437.1| hypothetical protein E5Q_02090 [Mixia osmundae IAM 14324]
Length = 1026
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/23 (65%), Positives = 19/23 (82%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSR 32
E K DGER+Q+HK GN F+Y+SR
Sbjct: 369 EEKLDGERIQLHKFGNNFRYWSR 391
>gi|358058473|dbj|GAA95436.1| hypothetical protein E5Q_02091 [Mixia osmundae IAM 14324]
Length = 1027
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/23 (65%), Positives = 19/23 (82%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSR 32
E K DGER+Q+HK GN F+Y+SR
Sbjct: 369 EEKLDGERIQLHKFGNNFRYWSR 391
>gi|45358533|ref|NP_988090.1| DNA ligase I, ATP-dependent Dnl1 [Methanococcus maripaludis S2]
gi|56748697|sp|Q6LYM1.1|DNLI_METMP RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|44921291|emb|CAF30526.1| ATP-dependent DNA ligase [Methanococcus maripaludis S2]
Length = 573
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 23/39 (58%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEI 48
E KYDG RVQVHK + K +SR L+ + + V EI
Sbjct: 250 ETKYDGARVQVHKSNGDVKIYSRRLENITNSVPELVEEI 288
>gi|401626455|gb|EJS44401.1| cdc9p [Saccharomyces arboricola H-6]
Length = 757
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 6/71 (8%)
Query: 30 FSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD------GISIRFPRVTKIRDDKDWKTA 83
F S +P + + ++E+ A+ S + I+ A G+S+RFPR +IR+DK + A
Sbjct: 680 FDSSAEPDVWFEPTTLFEVLTADLSLSPIYKAGSATFDKGVSLRFPRFLRIREDKGVEDA 739
Query: 84 TNLPELKVLFK 94
T+ ++ L++
Sbjct: 740 TSSDQIVELYE 750
>gi|321464185|gb|EFX75195.1| hypothetical protein DAPPUDRAFT_323605 [Daphnia pulex]
Length = 845
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 42 AQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPEL 89
+ + EI +E + + A G+++RFPRV +IR+D+ W + L E+
Sbjct: 490 SSAILEIKASEIVLSNSYKA-GMTLRFPRVQRIREDRAWDSCMTLSEV 536
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 4 NERCYSEIKYDGERVQVHKKGNEFKYFSR 32
N+ Y E K DGER Q+HK+G + +++R
Sbjct: 203 NKPFYVETKLDGERTQIHKRGKRYGFYTR 231
>gi|302660738|ref|XP_003022045.1| hypothetical protein TRV_03862 [Trichophyton verrucosum HKI 0517]
gi|291185971|gb|EFE41427.1| hypothetical protein TRV_03862 [Trichophyton verrucosum HKI 0517]
Length = 844
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 8/72 (11%)
Query: 35 KPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNL 86
+P + + Q VWE++ A+ + + +TA G+S+RFPR ++R+DK A+
Sbjct: 762 EPEVWFQPQEVWEMAFADITLSPTYTAAIGLVSDERGLSLRFPRFLRVREDKSIDEASTS 821
Query: 87 PELKVLFKKSKE 98
L L+ K E
Sbjct: 822 DYLAHLWDKQAE 833
>gi|302508101|ref|XP_003016011.1| hypothetical protein ARB_05408 [Arthroderma benhamiae CBS 112371]
gi|291179580|gb|EFE35366.1| hypothetical protein ARB_05408 [Arthroderma benhamiae CBS 112371]
Length = 844
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 8/72 (11%)
Query: 35 KPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNL 86
+P + + Q VWE++ A+ + + +TA G+S+RFPR ++R+DK A+
Sbjct: 762 EPEVWFQPQEVWEMAFADITLSPTYTAAIGLVSDERGLSLRFPRFLRVREDKSIDEASTS 821
Query: 87 PELKVLFKKSKE 98
L L+ K E
Sbjct: 822 DYLAHLWDKQAE 833
>gi|296824164|ref|XP_002850583.1| DNA ligase [Arthroderma otae CBS 113480]
gi|238838137|gb|EEQ27799.1| DNA ligase [Arthroderma otae CBS 113480]
Length = 824
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 8/72 (11%)
Query: 35 KPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNL 86
+P + + Q VWE++ A+ + + + A G+S+RFPR K+R+DK A+
Sbjct: 748 EPEVWFQPQEVWEMAFADITLSPTYVAAIGLVSEERGLSLRFPRFLKVREDKSINEASTS 807
Query: 87 PELKVLFKKSKE 98
L L++K E
Sbjct: 808 DYLAHLWEKQAE 819
>gi|409095358|ref|ZP_11215382.1| ATP-dependent DNA ligase [Thermococcus zilligii AN1]
Length = 559
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 21/28 (75%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSRSLKPV 37
EIKYDG RVQ+HK G++ +SR L+ V
Sbjct: 247 EIKYDGARVQIHKNGDKVIVYSRRLENV 274
>gi|378733666|gb|EHY60125.1| DNA ligase 1 [Exophiala dermatitidis NIH/UT8656]
Length = 931
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 8/69 (11%)
Query: 35 KPVLEHKAQPVWEISGAEFSQA--------EIHTADGISIRFPRVTKIRDDKDWKTATNL 86
+P + +A+ VWE+ A+ + + E+ +GIS+RFPR + RDDK + AT
Sbjct: 843 QPDVWFEARHVWEVKTADLTLSPRYRAAIDEMGGKNGISLRFPRFIQRRDDKKPEEATTT 902
Query: 87 PELKVLFKK 95
+ +++K
Sbjct: 903 KAIAEMYRK 911
>gi|325960182|ref|YP_004291648.1| DNA ligase [Methanobacterium sp. AL-21]
gi|325331614|gb|ADZ10676.1| DNA ligase [Methanobacterium sp. AL-21]
Length = 560
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%)
Query: 7 CYSEIKYDGERVQVHKKGNEFKYFSRSLKPV 37
+ E KYDG RVQ+H+ G+E F+R L+ +
Sbjct: 253 AFCETKYDGIRVQIHRLGDEVNVFTRRLENI 283
>gi|340345096|ref|ZP_08668228.1| DNA ligase [Candidatus Nitrosoarchaeum koreensis MY1]
gi|339520237|gb|EGP93960.1| DNA ligase [Candidatus Nitrosoarchaeum koreensis MY1]
Length = 590
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 9 SEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTADGISI 66
+E K DGERVQ+H +G + FSRSL+ + + V +I +Q I A+ ++I
Sbjct: 251 AEYKLDGERVQLHIEGEKVILFSRSLENITSYYPDIVEKIPKTIQAQKVILEAEAVAI 308
>gi|295660375|ref|XP_002790744.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226281297|gb|EEH36863.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1052
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 25/32 (78%)
Query: 65 SIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
++RFPRV KI +D+D + AT L EL++L K++
Sbjct: 593 TLRFPRVLKIHNDRDVEDATTLEELQMLAKEA 624
>gi|452978409|gb|EME78173.1| hypothetical protein MYCFIDRAFT_168670 [Pseudocercospora fijiensis
CIRAD86]
Length = 885
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 8/90 (8%)
Query: 14 DGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTAD--------GIS 65
DG V + Y + P + + Q VWE+ A+ + + +TA G+S
Sbjct: 773 DGVLVGKNTLSERPSYVEYAGTPDVWFEPQEVWEMIFADITLSPTYTAALGLVNEERGLS 832
Query: 66 IRFPRVTKIRDDKDWKTATNLPELKVLFKK 95
+RFPR K+R DK A+ L L++K
Sbjct: 833 MRFPRFLKVRGDKSIDEASTNEFLAALYRK 862
>gi|322697185|gb|EFY88968.1| DNA ligase (Polydeoxyribonucleotide synthase [ATP]) [Metarhizium
acridum CQMa 102]
Length = 899
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 11/67 (16%)
Query: 45 VWEISGAEFSQAEIHTAD-----------GISIRFPRVTKIRDDKDWKTATNLPELKVLF 93
VWE+ A+ + + + A GIS+RFPR KIRDDK AT+ ++ ++
Sbjct: 820 VWEVKTADLTLSPRYKAGCKEGVDPAGDKGISLRFPRFIKIRDDKRPDEATSSRQIAEMY 879
Query: 94 KKSKETS 100
+K + +
Sbjct: 880 RKQESVT 886
>gi|291415245|ref|XP_002723865.1| PREDICTED: DNA ligase (ATP) 1, partial [Oryctolagus cuniculus]
Length = 757
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 8/65 (12%)
Query: 45 VWEISGAEFSQAEIHTA--------DGISIRFPRVTKIRDDKDWKTATNLPELKVLFKKS 96
VWE+ A+ S + I+ A GIS+RFPR ++R DK + AT E+ L+ +
Sbjct: 679 VWEVKCADLSLSPIYPAARGLVDKEKGISLRFPRFVRVRKDKMPEEATTGAEVADLYWRQ 738
Query: 97 KETSD 101
+ +
Sbjct: 739 SQIQN 743
>gi|229818773|ref|YP_002880299.1| ATP-dependent DNA ligase [Beutenbergia cavernae DSM 12333]
gi|259645310|sp|C5BW79.1|DNLI_BEUC1 RecName: Full=Probable DNA ligase; AltName:
Full=Polydeoxyribonucleotide synthase [ATP]
gi|229564686|gb|ACQ78537.1| DNA ligase I, ATP-dependent Dnl1 [Beutenbergia cavernae DSM 12333]
Length = 512
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 14/28 (50%), Positives = 21/28 (75%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSRSLKPV 37
++K DG R+QVHK G+E + F+RSL +
Sbjct: 217 DVKLDGIRIQVHKAGDEVRVFTRSLDDI 244
>gi|435851818|ref|YP_007313404.1| ATP-dependent DNA ligase I [Methanomethylovorans hollandica DSM
15978]
gi|433662448|gb|AGB49874.1| ATP-dependent DNA ligase I [Methanomethylovorans hollandica DSM
15978]
Length = 561
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 9 SEIKYDGERVQVHKKGNEFKYFSRSLKPV 37
+E K+DG RVQ+HKKG+E +SR L+ +
Sbjct: 253 AEWKFDGARVQIHKKGDEVILYSRRLENI 281
>gi|404212713|ref|YP_006666888.1| ATP-dependent DNA ligase [Gordonia sp. KTR9]
gi|403643512|gb|AFR46752.1| ATP-dependent DNA ligase [Gordonia sp. KTR9]
Length = 505
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 14/28 (50%), Positives = 20/28 (71%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSRSLKPV 37
+ K DG R+QVH+KG E F+R+L+ V
Sbjct: 209 DYKLDGARIQVHRKGTEISVFTRTLRDV 236
>gi|358379416|gb|EHK17096.1| hypothetical protein TRIVIDRAFT_183439 [Trichoderma virens Gv29-8]
Length = 854
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 11/67 (16%)
Query: 45 VWEISGAEFSQAEIHTAD-----------GISIRFPRVTKIRDDKDWKTATNLPELKVLF 93
VWE+ A+ + + + A GIS+RFPR KIRDDK AT+ ++ ++
Sbjct: 775 VWEVKTADLTLSPRYKAGWKEGVDPAGEKGISLRFPRFIKIRDDKKPDEATSSRQVAEMY 834
Query: 94 KKSKETS 100
+K + +
Sbjct: 835 RKQESVT 841
>gi|354546740|emb|CCE43472.1| hypothetical protein CPAR2_211160 [Candida parapsilosis]
Length = 942
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 21/28 (75%)
Query: 8 YSEIKYDGERVQVHKKGNEFKYFSRSLK 35
Y E K DG+R+ +HK+G FK+FSR LK
Sbjct: 300 YIEEKMDGDRMLLHKEGGRFKFFSRRLK 327
>gi|340516366|gb|EGR46615.1| DNA ligase [Trichoderma reesei QM6a]
Length = 877
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 11/67 (16%)
Query: 45 VWEISGAEFSQAEIHTAD-----------GISIRFPRVTKIRDDKDWKTATNLPELKVLF 93
VWE+ A+ + + + A GIS+RFPR KIRDDK AT+ ++ ++
Sbjct: 798 VWEVKTADLTLSPRYKAGWKEGVDPAGEKGISLRFPRFIKIRDDKKPDEATSSRQVAEMY 857
Query: 94 KKSKETS 100
+K + +
Sbjct: 858 RKQESVT 864
>gi|327307100|ref|XP_003238241.1| DNA ligase I [Trichophyton rubrum CBS 118892]
gi|326458497|gb|EGD83950.1| DNA ligase I [Trichophyton rubrum CBS 118892]
Length = 843
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 8/72 (11%)
Query: 35 KPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNL 86
+P + + Q VWE++ A+ + + +TA G+S+RFPR ++R+DK A+
Sbjct: 761 EPEVWFQPQEVWEMAFADITLSPTYTAAIGLVSDERGLSLRFPRFLRVREDKSIDEASTS 820
Query: 87 PELKVLFKKSKE 98
L L+ K E
Sbjct: 821 DYLAHLWDKQTE 832
>gi|254521503|ref|ZP_05133558.1| thermostable DNA ligase [Stenotrophomonas sp. SKA14]
gi|219719094|gb|EED37619.1| thermostable DNA ligase [Stenotrophomonas sp. SKA14]
Length = 535
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 36 PVLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVL 92
PV +A+ V+E+ +Q+ H + G+++RFPR+ + R DK A L L+ L
Sbjct: 478 PVRSVRAEQVFELGFEAVNQSSRHKS-GVAVRFPRILRWRHDKPASEADQLATLQAL 533
>gi|145547864|ref|XP_001459613.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124427439|emb|CAK92216.1| unnamed protein product [Paramecium tetraurelia]
Length = 680
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 9/50 (18%)
Query: 45 VWEISGAEFSQAEIHTA---------DGISIRFPRVTKIRDDKDWKTATN 85
VWEI A+ + I++A G+ +RFPR+ K+R+DK AT+
Sbjct: 604 VWEIKSADIQISPIYSACSTILQLNNKGVGLRFPRLIKVREDKKPNEATS 653
>gi|393221932|gb|EJD07416.1| DNA ligase 4 [Fomitiporia mediterranea MF3/22]
Length = 1029
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/23 (69%), Positives = 19/23 (82%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSR 32
E K DGER+Q+HK+GNEF Y SR
Sbjct: 293 EEKLDGERMQLHKRGNEFFYCSR 315
>gi|294495751|ref|YP_003542244.1| DNA ligase I, ATP-dependent Dnl1 [Methanohalophilus mahii DSM 5219]
gi|292666750|gb|ADE36599.1| DNA ligase I, ATP-dependent Dnl1 [Methanohalophilus mahii DSM 5219]
Length = 569
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/26 (65%), Positives = 19/26 (73%)
Query: 9 SEIKYDGERVQVHKKGNEFKYFSRSL 34
+E KYDGERVQVH G+ K FSR L
Sbjct: 244 AEEKYDGERVQVHVDGDNIKAFSRRL 269
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 17/83 (20%)
Query: 27 FKYFSRSLKPV---LEHKAQP--------VWEISGAEFSQAEIHT------ADGISIRFP 69
K +S KPV ++ QP V E+ G+E + + HT +G ++RFP
Sbjct: 486 LKKYSIEKKPVNILIDSNMQPDNYIEPAVVIEVIGSEITSSPSHTSGQENSGNGYALRFP 545
Query: 70 RVTKIRDDKDWKTATNLPELKVL 92
R +IR DK AT + E+K L
Sbjct: 546 RFLRIRYDKGPGDATTVEEVKHL 568
>gi|55377348|ref|YP_135198.1| DNA ligase [Haloarcula marismortui ATCC 43049]
gi|74520109|sp|Q5V4R0.1|DNLI_HALMA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|55230073|gb|AAV45492.1| DNA ligase [Haloarcula marismortui ATCC 43049]
Length = 554
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 20/126 (15%)
Query: 5 ERCYSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISG-----AEFSQAEIH 59
+R E KYDG RVQVH G + + FSR+++ V + + V + A +
Sbjct: 248 DRAAVEWKYDGARVQVHFDGEDARLFSRNMEEVTDPLPEVVETVESTLDAPAILDGEVVA 307
Query: 60 TADG--------ISIRFPR---VTKIRDDKDWKTATNLPELKVLFKKSKETSDFTLKPKY 108
DG + RF R V R+D A L L ++ D L+ ++
Sbjct: 308 VDDGGDPLPFQEVLRRFRRKHDVAAARED----VAVRLHAFDCLHAAGEDLLDAALETRH 363
Query: 109 DRIKNL 114
DR+++L
Sbjct: 364 DRLESL 369
>gi|242024302|ref|XP_002432567.1| DNA ligase, putative [Pediculus humanus corporis]
gi|212518027|gb|EEB19829.1| DNA ligase, putative [Pediculus humanus corporis]
Length = 891
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 45 VWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVLFK 94
+ EI +E + I + G ++RFPRV KIR DK WK L L+ + K
Sbjct: 548 ILEIKASEIVSSAIFKS-GYALRFPRVEKIRYDKTWKECLTLHNLEEIAK 596
>gi|147918976|ref|YP_687298.1| ATP-dependent DNA ligase [Methanocella arvoryzae MRE50]
gi|121682804|sp|Q0W0X1.1|DNLI_UNCMA RecName: Full=DNA ligase; AltName: Full=Polydeoxyribonucleotide
synthase [ATP]
gi|110622694|emb|CAJ37972.1| ATP-dependent DNA ligase [Methanocella arvoryzae MRE50]
Length = 568
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 16/113 (14%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTADGISI--- 66
E+KYDG R+Q+HK G + K +SR L+ + + + V + + S I ++ I+I
Sbjct: 249 EMKYDGARLQIHKVGKDVKLYSRRLEDLTDALPEIVGYVRESVKSDTAILDSECIAIDKD 308
Query: 67 ------------RFPRVTKIRDDKDWKTATNLPELKVLFKKSKETSDFTLKPK 107
R R+ K+ + + P VLF + + T D L+ +
Sbjct: 309 TGRPIPFQNILTRLRRIHKVEETQKQFPLILRP-FDVLFNQGQSTIDLPLRER 360
>gi|448688774|ref|ZP_21694511.1| DNA ligase [Haloarcula japonica DSM 6131]
gi|445778644|gb|EMA29586.1| DNA ligase [Haloarcula japonica DSM 6131]
Length = 553
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 5 ERCYSEIKYDGERVQVHKKGNEFKYFSRSLKPVLE 39
+R E KYDG RVQVH G + + FSR+++ V +
Sbjct: 247 DRAAVEWKYDGARVQVHFDGEDARLFSRNMEEVTD 281
>gi|452846225|gb|EME48158.1| hypothetical protein DOTSEDRAFT_60502 [Dothistroma septosporum
NZE10]
Length = 963
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 23/37 (62%)
Query: 63 GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKSKET 99
G+++RFPR K+R DKDW A + E L +++E
Sbjct: 631 GLTLRFPRFKKLRTDKDWTQALGIDEFITLKNEAEEA 667
>gi|21228816|ref|NP_634738.1| ATP-dependent DNA ligase [Methanosarcina mazei Go1]
gi|23813979|sp|Q8PTK1.1|DNLI2_METMA RecName: Full=DNA ligase 2; AltName: Full=Polydeoxyribonucleotide
synthase [ATP] 2
gi|20907336|gb|AAM32410.1| ATP-dependent DNA ligase [Methanosarcina mazei Go1]
Length = 568
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 19/28 (67%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSRSLKPV 37
E K+DG RVQ+HK GN FSR L+ V
Sbjct: 254 EWKFDGARVQIHKDGNSVTLFSRKLENV 281
>gi|389745521|gb|EIM86702.1| ATP-dependent DNA ligase [Stereum hirsutum FP-91666 SS1]
Length = 1077
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/23 (69%), Positives = 19/23 (82%)
Query: 10 EIKYDGERVQVHKKGNEFKYFSR 32
E K DGER+Q+HK+GNEF Y SR
Sbjct: 303 EEKLDGERMQLHKRGNEFFYCSR 325
>gi|326485463|gb|EGE09473.1| DNA ligase I [Trichophyton equinum CBS 127.97]
Length = 749
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 8/72 (11%)
Query: 35 KPVLEHKAQPVWEISGAEFSQAEIHTAD--------GISIRFPRVTKIRDDKDWKTATNL 86
+P + + Q VWE++ A+ + + +TA G+S+RFPR ++R+DK A+
Sbjct: 667 EPEVWFQPQEVWEMAFADITLSPTYTAAIGLVSDERGLSLRFPRFLRVREDKSIDEASTS 726
Query: 87 PELKVLFKKSKE 98
L L+ K E
Sbjct: 727 NYLAHLWDKQAE 738
>gi|116192011|ref|XP_001221818.1| hypothetical protein CHGG_05723 [Chaetomium globosum CBS 148.51]
gi|88181636|gb|EAQ89104.1| hypothetical protein CHGG_05723 [Chaetomium globosum CBS 148.51]
Length = 862
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 11/67 (16%)
Query: 45 VWEISGAEFSQAEIHTAD-----------GISIRFPRVTKIRDDKDWKTATNLPELKVLF 93
VWE+ A+ + + + A GIS+RFPR KIRDDK AT+ ++ ++
Sbjct: 783 VWEVKTADLTLSPRYKAGMKEGVDPGGEKGISLRFPRFIKIRDDKKPDEATSSRQVAEMY 842
Query: 94 KKSKETS 100
+K + +
Sbjct: 843 RKQESVA 849
>gi|302406130|ref|XP_003000901.1| DNA ligase [Verticillium albo-atrum VaMs.102]
gi|261360159|gb|EEY22587.1| DNA ligase [Verticillium albo-atrum VaMs.102]
Length = 893
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 11/67 (16%)
Query: 45 VWEISGAEFSQAEIHTAD-----------GISIRFPRVTKIRDDKDWKTATNLPELKVLF 93
VWE+ A+ + + + A GIS+RFPR KIRDDK AT+ ++ ++
Sbjct: 814 VWEVKTADLTLSPRYKAGAKEGVDPSGEKGISLRFPRFIKIRDDKKPDEATSSRQVAEMY 873
Query: 94 KKSKETS 100
+K + +
Sbjct: 874 RKQESVT 880
>gi|218194450|gb|EEC76877.1| hypothetical protein OsI_15081 [Oryza sativa Indica Group]
Length = 1981
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 7/65 (10%)
Query: 32 RSLKPVLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKV 91
RS+KP L V+E+ +++ H + GI++RFPR+ + R+DK + A +L L+
Sbjct: 1649 RSVKPTL------VFELGFEGIARSTRHKS-GIAVRFPRMLRWREDKPVEEADSLETLEG 1701
Query: 92 LFKKS 96
L +S
Sbjct: 1702 LLPRS 1706
>gi|389639142|ref|XP_003717204.1| DNA ligase 1 [Magnaporthe oryzae 70-15]
gi|351643023|gb|EHA50885.1| DNA ligase 1 [Magnaporthe oryzae 70-15]
gi|440475490|gb|ELQ44160.1| DNA ligase 1 [Magnaporthe oryzae Y34]
gi|440485387|gb|ELQ65353.1| DNA ligase 1 [Magnaporthe oryzae P131]
Length = 896
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 11/67 (16%)
Query: 45 VWEISGAEFSQAEIHTAD-----------GISIRFPRVTKIRDDKDWKTATNLPELKVLF 93
VWE+ A+ + + + A GIS+RFPR K+RDDK AT+ ++ ++
Sbjct: 817 VWEVKTADLTLSPRYKAGCGEGVDPSGTKGISLRFPRFIKLRDDKKPDEATSSRQVAEMY 876
Query: 94 KKSKETS 100
+K + S
Sbjct: 877 RKQESVS 883
>gi|408825732|ref|ZP_11210622.1| ATP-dependent DNA ligase [Streptomyces somaliensis DSM 40738]
Length = 515
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 22/33 (66%)
Query: 7 CYSEIKYDGERVQVHKKGNEFKYFSRSLKPVLE 39
C E K DG RVQVH+ G+E + ++RSL + +
Sbjct: 205 CAVEEKLDGVRVQVHRTGDEVRIYTRSLDDITD 237
>gi|357386164|ref|YP_004900888.1| ATP-dependent DNA ligase LigC [Pelagibacterium halotolerans B2]
gi|351594801|gb|AEQ53138.1| ATP-dependent DNA ligase LigC [Pelagibacterium halotolerans B2]
Length = 525
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 33 SLKPVLEHKAQPVWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVL 92
S PV E + V+E++ + +QA G+++RFPR+ +IR DK A ++ E++ L
Sbjct: 463 SFGPVREVEKSLVFEVA-FDSAQASTRHKSGVALRFPRINRIRWDKPAAEAAHVGEVEAL 521
>gi|255513815|gb|EET90080.1| DNA ligase I, ATP-dependent Dnl1 [Candidatus Micrarchaeum
acidiphilum ARMAN-2]
Length = 590
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Query: 6 RCYSEIKYDGERVQVHKKGNEFKYFSRSLKPVLEHKAQPVWEISGAEFSQAEIHTADGI 64
RC E KYDG R QVH G + + FSR LE Q +I+ A E+H+ D I
Sbjct: 246 RCAVEQKYDGFRCQVHMHGKKVRIFSRR----LEDTTQMFPDIADAALK--EVHSDDII 298
>gi|254166594|ref|ZP_04873448.1| DNA ligase I, ATP-dependent superfamily [Aciduliprofundum boonei
T469]
gi|289596489|ref|YP_003483185.1| DNA ligase I, ATP-dependent Dnl1 [Aciduliprofundum boonei T469]
gi|197624204|gb|EDY36765.1| DNA ligase I, ATP-dependent superfamily [Aciduliprofundum boonei
T469]
gi|289534276|gb|ADD08623.1| DNA ligase I, ATP-dependent Dnl1 [Aciduliprofundum boonei T469]
Length = 590
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 9/59 (15%)
Query: 45 VWEISGAEFSQAEIHT--------ADGISIRFPRVT-KIRDDKDWKTATNLPELKVLFK 94
V E+ GAE + + HT G++IRFPR T + RDDK + AT EL ++K
Sbjct: 525 VLEVIGAEITLSPTHTCARDVIEKGTGLAIRFPRFTGRWRDDKSPEEATTTKELIEMYK 583
>gi|154285134|ref|XP_001543362.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150407003|gb|EDN02544.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 999
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 45 VWEISGAEFSQAEIHTADGISIRFPRVTKIRDDKDWKTATNLPELKVL 92
V E+ G+ F + A+ ++RFPRV KI D+D + AT L EL+VL
Sbjct: 517 VVEMVGSGFEKPA--GANYFTLRFPRVLKIHMDRDVEDATTLEELQVL 562
>gi|332016529|gb|EGI57410.1| DNA ligase 4 [Acromyrmex echinatior]
Length = 898
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 20/29 (68%)
Query: 4 NERCYSEIKYDGERVQVHKKGNEFKYFSR 32
N+ Y + KYDGER Q+H K +FKY +R
Sbjct: 263 NDLYYVQTKYDGERSQLHMKNGKFKYLTR 291
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Query: 63 GISIRFPRVTKIRDDKDWKTATNLPELKVLFKKSKETSDFTLKPK----YDRIKNLKLQK 118
G S+RFPRVT +R DK W ++ EL L K T + DR+ KLQK
Sbjct: 572 GYSLRFPRVTNVRMDKPWYSSCTTLELLSLTKDEGMIQKLTKREATLHDIDRVPVSKLQK 631
Query: 119 A 119
Sbjct: 632 V 632
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.132 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,874,488,871
Number of Sequences: 23463169
Number of extensions: 66260604
Number of successful extensions: 162407
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 865
Number of HSP's successfully gapped in prelim test: 432
Number of HSP's that attempted gapping in prelim test: 160135
Number of HSP's gapped (non-prelim): 2436
length of query: 124
length of database: 8,064,228,071
effective HSP length: 90
effective length of query: 34
effective length of database: 5,952,542,861
effective search space: 202386457274
effective search space used: 202386457274
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 69 (31.2 bits)