AmiGO: BLAST Results


BLAST match view associations BLAST with l(3)72Ab l(3)72Ab l(3)72Ab lethal (3) 72Ab	protein from Drosophila melanogaster	0.
BLAST match view associations BLAST with SNRNP200 SNRNP200 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase	protein from Homo sapiens	0.
BLAST match view associations BLAST with SNRNP200 SNRNP200 SNRNP200 Uncharacterized protein	protein from Bos taurus	0.
BLAST match view associations BLAST with snrnp200 snrnp200 snrnp200 small nuclear ribonucleoprotein 200 (U5)	gene_product from Danio rerio	0.
BLAST match view associations BLAST with F1SU44 F1SU44 F1SU44 Uncharacterized protein	protein from Sus scrofa	0.
BLAST match view associations BLAST with snrp-200 snrp-200 snrp-200	gene from Caenorhabditis elegans	0.
BLAST match view associations BLAST with Y46G5A.4 Y46G5A.4 Y46G5A.4 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase	protein from Caenorhabditis elegans	0.
BLAST match view associations BLAST with emb1507 emb1507 emb1507 embryo defective 1507	protein from Arabidopsis thaliana	0.
BLAST match view associations BLAST with AT2G42270 AT2G42270 AT2G42270	protein from Arabidopsis thaliana	0.
BLAST match view associations BLAST with ascc3l ascc3l ascc3l U5 small nuclear ribonucleoprotein 200 kDa helicase	gene from Dictyostelium discoideum	0.
BLAST match view associations BLAST with orf19.3098 orf19.3098 orf19.3098	gene_product from Candida albicans	3.1e-238
BLAST match view associations BLAST with SNRNP200 SNRNP200 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase	protein from Homo sapiens	6.1e-225
BLAST match view associations BLAST with BRR2 BRR2 BRR2 RNA-dependent ATPase RNA helicase (DEIH box)	gene from Saccharomyces cerevisiae	2.2e-221
BLAST match view associations BLAST with ascc3 ascc3 ascc3 Activating signal cointegrator 1 complex subunit 3	protein from Gallus gallus	2.3e-199
BLAST match view associations BLAST with ascc3 ascc3 ascc3 Activating signal cointegrator 1 complex subunit 3	protein from Bos taurus	1.4e-197
BLAST match view associations BLAST with ASCC3 ASCC3 ASCC3 Uncharacterized protein	protein from Canis lupus familiaris	1.8e-197
BLAST match view associations BLAST with PFD1060w PFD1060w PFD1060w u5 small nuclear ribonucleoprotein-specific protein, putative	gene from Plasmodium falciparum	5.9e-197
BLAST match view associations BLAST with PFD1060w PFD1060w PFD1060w U5 small nuclear ribonucleoprotein-specific protein, putative	protein from Plasmodium falciparum 3D7	5.9e-197
BLAST match view associations BLAST with ASCC3 ASCC3 ASCC3 Activating signal cointegrator 1 complex subunit 3	protein from Homo sapiens	6.6e-191
BLAST match view associations BLAST with ascc3 ascc3 ascc3 activating signal cointegrator 1 complex subunit	gene from Dictyostelium discoideum	4.8e-186
BLAST match view associations BLAST with CG5205 CG5205 CG5205	protein from Drosophila melanogaster	1.3e-183
BLAST match view associations BLAST with ASCC3 ASCC3 ASCC3 Uncharacterized protein	protein from Canis lupus familiaris	1.1e-179
BLAST match view associations BLAST with H9KZ72 H9KZ72 H9KZ72 Uncharacterized protein	protein from Gallus gallus	3.5e-176
BLAST match view associations BLAST with Ascc3 Ascc3 Ascc3 activating signal cointegrator 1 complex subunit 3	protein from Mus musculus	6.3e-170
BLAST match view associations BLAST with Ascc3 Ascc3 Ascc3 activating signal cointegrator 1 complex subunit 3	gene from Rattus norvegicus	1.2e-169
BLAST match view associations BLAST with MGG_06124 MGG_06124 MGG_06124 Activating signal cointegrator 1 complex subunit 3	protein from Magnaporthe oryzae 70-15	4.3e-168
BLAST match view associations BLAST with Y54E2A.4 Y54E2A.4 Y54E2A.4	gene from Caenorhabditis elegans	9.9e-158
BLAST match view associations BLAST with orf19.3980 orf19.3980 orf19.3980	gene_product from Candida albicans	4.6e-133
BLAST match view associations BLAST with SLH1 SLH1 SLH1 Putative RNA helicase related to Ski2p	gene from Saccharomyces cerevisiae	7.2e-125
BLAST match view associations BLAST with PF14_0370 PF14_0370 PF14_0370 RNA helicase, putative	gene from Plasmodium falciparum	3.0e-94
BLAST match view associations BLAST with PF14_0370 PF14_0370 PF14_0370 DEAD/DEAH box helicase, putative	protein from Plasmodium falciparum 3D7	3.0e-94
BLAST match view associations BLAST with SNRNP200 SNRNP200 SNRNP200 Uncharacterized protein	protein from Sus scrofa	3.1e-90
BLAST match view associations BLAST with Hfm1 Hfm1 Hfm1 HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)	gene from Rattus norvegicus	7.9e-68
BLAST match view associations BLAST with SNRNP200 SNRNP200 SNRNP200 cDNA FLJ56901, highly similar to U5 small nuclear ribonucleoprotein 200 kDa helicase (EC 3.6.1.-)	protein from Homo sapiens	2.6e-67
BLAST match view associations BLAST with HFM1 HFM1 HFM1 Probable ATP-dependent DNA helicase HFM1	protein from Homo sapiens	8.5e-65
BLAST match view associations BLAST with RCK RCK RCK AT3G27730	protein from Arabidopsis thaliana	4.4e-64
BLAST match view associations BLAST with HFM1 HFM1 HFM1 Uncharacterized protein	protein from Bos taurus	6.7e-63
BLAST match view associations BLAST with HFM1 HFM1 HFM1 Uncharacterized protein	protein from Sus scrofa	1.3e-61
BLAST match view associations BLAST with HFM1 HFM1 HFM1 Uncharacterized protein	protein from Canis lupus familiaris	1.7e-61
BLAST match view associations BLAST with HFM1 HFM1 HFM1 Uncharacterized protein	protein from Canis lupus familiaris	2.0e-61
BLAST match view associations BLAST with HFM1 HFM1 HFM1 Probable ATP-dependent DNA helicase HFM1	protein from Homo sapiens	1.5e-57
BLAST match view associations BLAST with hfm1 hfm1 hfm1 HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)	gene_product from Danio rerio	1.7e-57
BLAST match view associations BLAST with HFM1 HFM1 HFM1 Meiosis specific DNA helicase	gene from Saccharomyces cerevisiae	1.1e-50
BLAST match view associations BLAST with MGG_05900 MGG_05900 MGG_05900 Uncharacterized protein	protein from Magnaporthe oryzae 70-15	1.1e-48
BLAST match view associations BLAST with LOC100525691 LOC100525691 LOC100525691 Uncharacterized protein	protein from Sus scrofa	1.4e-48
BLAST match view associations BLAST with Snrnp200 Snrnp200 Snrnp200 small nuclear ribonucleoprotein 200 (U5)	gene from Rattus norvegicus	6.7e-48
BLAST match view associations BLAST with I3LAH4 I3LAH4 I3LAH4 Uncharacterized protein	protein from Sus scrofa	6.0e-39
BLAST match view associations BLAST with LOC100517018 LOC100517018 LOC100517018 Uncharacterized protein	protein from Sus scrofa	1.2e-27
BLAST match view associations BLAST with I3LAA7 I3LAA7 I3LAA7 Uncharacterized protein	protein from Sus scrofa	2.4e-24
BLAST match view associations BLAST with I3LVA7 I3LVA7 I3LVA7 Uncharacterized protein	protein from Sus scrofa	1.5e-22
BLAST match view associations BLAST with helq-1 helq-1 helq-1	gene from Caenorhabditis elegans	3.0e-17
BLAST match view associations BLAST with I3L8F4 I3L8F4 I3L8F4 Uncharacterized protein	protein from Sus scrofa	2.9e-16
BLAST match view associations BLAST with Polq Polq Polq polymerase (DNA directed), theta	gene from Rattus norvegicus	2.7e-15
BLAST match view associations BLAST with Helq Helq Helq helicase, POLQ-like	protein from Mus musculus	1.1e-14
BLAST match view associations BLAST with POLQ POLQ POLQ Uncharacterized protein	protein from Canis lupus familiaris	1.3e-14
BLAST match view associations BLAST with POLQ POLQ POLQ DNA polymerase theta	protein from Homo sapiens	4.1e-14
BLAST match view associations BLAST with HELQ HELQ HELQ Uncharacterized protein	protein from Sus scrofa	1.4e-13
BLAST match view associations BLAST with HELQ HELQ HELQ Uncharacterized protein	protein from Canis lupus familiaris	2.3e-13
BLAST match view associations BLAST with HELQ HELQ HELQ Helicase POLQ-like	protein from Homo sapiens	2.6e-13
BLAST match view associations BLAST with HELQ HELQ HELQ Helicase POLQ-like	protein from Homo sapiens	4.4e-13
BLAST match view associations BLAST with HELQ HELQ HELQ Uncharacterized protein	protein from Gallus gallus	4.5e-13
BLAST match view associations BLAST with HELQ HELQ HELQ Uncharacterized protein	protein from Canis lupus familiaris	6.1e-13
BLAST match view associations BLAST with si:rp71-1p14.5 si:rp71-1p14.5 si:rp71-1p14.5	gene_product from Danio rerio	1.6e-12
BLAST match view associations BLAST with polq-1 polq-1 polq-1	gene from Caenorhabditis elegans	1.9e-12
BLAST match view associations BLAST with helq helq helq helicase, POLQ-like	gene_product from Danio rerio	4.7e-12
BLAST match view associations BLAST with helY helY helY Probable helicase HelY	protein from Mycobacterium tuberculosis	6.1e-12
BLAST match view associations BLAST with PF13_0102 PF13_0102 PF13_0102 DNAJ-like Sec63 homologue	gene from Plasmodium falciparum	1.0e-11
BLAST match view associations BLAST with PF13_0102 PF13_0102 PF13_0102 DnaJ/SEC63 protein, putative	protein from Plasmodium falciparum 3D7	1.0e-11
BLAST match view associations BLAST with mus308 mus308 mus308 mutagen-sensitive 308	protein from Drosophila melanogaster	1.9e-11
BLAST match view associations BLAST with DDB_G0279107 DDB_G0279107 DDB_G0279107 Helicase POLQ-like	gene from Dictyostelium discoideum	2.0e-11
BLAST match view associations BLAST with POLQ POLQ POLQ Uncharacterized protein	protein from Gallus gallus	1.8e-10
BLAST match view associations BLAST with AT4G32700 AT4G32700 AT4G32700	protein from Arabidopsis thaliana	2.1e-10
BLAST match view associations BLAST with sec63 sec63 sec63 SEC63-like (S. cerevisiae)	gene_product from Danio rerio	3.6e-09
BLAST match view associations BLAST with SEC63 SEC63 SEC63 Uncharacterized protein	protein from Gallus gallus	5.4e-09
BLAST match view associations BLAST with SEC63 SEC63 SEC63 Translocation protein SEC63 homolog	protein from Canis lupus familiaris	5.5e-09
BLAST match view associations BLAST with PFF0100w PFF0100w PFF0100w putative ATP dependent RNA helicase	gene from Plasmodium falciparum	1.3e-08
BLAST match view associations BLAST with SEC63 SEC63 SEC63 Uncharacterized protein	protein from Bos taurus	1.5e-08
BLAST match view associations BLAST with SEC63 SEC63 SEC63 Translocation protein SEC63 homolog	protein from Homo sapiens	1.5e-08
BLAST match view associations BLAST with Sec63 Sec63 Sec63 SEC63-like (S. cerevisiae)	protein from Mus musculus	1.5e-08
BLAST match view associations BLAST with POLQ POLQ POLQ Uncharacterized protein	protein from Bos taurus	3.6e-08
BLAST match view associations BLAST with MTR4 MTR4 MTR4 homolog of yeast MTR4	protein from Arabidopsis thaliana	5.5e-08
BLAST match view associations BLAST with AT3G28870 AT3G28870 AT3G28870	protein from Arabidopsis thaliana	6.0e-08
BLAST match view associations BLAST with sec63 sec63 sec63	protein from Drosophila melanogaster	1.3e-07
BLAST match view associations BLAST with skih-2 skih-2 skih-2	gene from Caenorhabditis elegans	1.4e-07
BLAST match view associations BLAST with mus301 mus301 mus301 mutagen-sensitive 301	protein from Drosophila melanogaster	1.4e-07
Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy14582
        (1689 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

FB|FBgn0263599 - symbol:l(3)72Ab "lethal (3) 72Ab" specie...  1927  0.        4
UNIPROTKB|O75643 - symbol:SNRNP200 "U5 small nuclear ribo...  1815  0.        5
UNIPROTKB|E1BH78 - symbol:LOC100850262 "Uncharacterized p...  1814  0.        5
ZFIN|ZDB-GENE-081105-64 - symbol:si:ch211-251j10.5 "si:ch...  1803  0.        5
UNIPROTKB|F1LNJ2 - symbol:Ascc3l1 "Protein Ascc3l1" speci...  1802  0.        5
UNIPROTKB|F1SU44 - symbol:F1SU44 "Uncharacterized protein...  1695  0.        4
WB|WBGene00012896 - symbol:snrp-200 species:6239 "Caenorh...  1603  0.        5
UNIPROTKB|Q9U2G0 - symbol:Y46G5A.4 "Putative U5 small nuc...  1603  0.        5
TAIR|locus:2037375 - symbol:emb1507 "embryo defective 150...  1536  0.        4
TAIR|locus:2059969 - symbol:AT2G42270 species:3702 "Arabi...  1474  0.        4
ASPGD|ASPL0000051297 - symbol:AN10194 species:162425 "Eme...  1411  0.        5
DICTYBASE|DDB_G0270042 - symbol:ascc3l "U5 small nuclear ...  1382  0.        6
POMBASE|SPAC9.03c - symbol:brr2 "U5 snRNP complex subunit...  1362  0.        5
UNIPROTKB|H9L1I7 - symbol:SNRNP200 "Uncharacterized prote...  1691  3.8e-270  3
CGD|CAL0001532 - symbol:orf19.3098 species:5476 "Candida ...  1121  3.1e-238  6
UNIPROTKB|C9JAQ9 - symbol:SNRNP200 "U5 small nuclear ribo...  1701  6.1e-225  3
SGD|S000000974 - symbol:BRR2 "RNA-dependent ATPase RNA he...  1141  2.2e-221  5
UNIPROTKB|F1NTD6 - symbol:ascc3 "Activating signal cointe...  1018  2.3e-199  6
UNIPROTKB|H9L1I6 - symbol:SNRNP200 "Uncharacterized prote...  1691  2.8e-198  2
UNIPROTKB|E1BNG3 - symbol:ascc3 "Activating signal cointe...  1016  1.4e-197  6
UNIPROTKB|F6Y2F0 - symbol:ASCC3 "Uncharacterized protein"...  1005  1.8e-197  6
GENEDB_PFALCIPARUM|PFD1060w - symbol:PFD1060w "u5 small n...   609  5.9e-197  9
UNIPROTKB|Q8IFP1 - symbol:PFD1060w "U5 small nuclear ribo...   609  5.9e-197  9
UNIPROTKB|Q8N3C0 - symbol:ASCC3 "Activating signal cointe...   986  6.6e-191  5
DICTYBASE|DDB_G0290389 - symbol:ascc3 "activating signal ...   982  4.8e-186  6
FB|FBgn0038344 - symbol:CG5205 species:7227 "Drosophila m...   921  1.3e-183  7
UNIPROTKB|E2QVY0 - symbol:ASCC3 "Uncharacterized protein"...  1005  1.1e-179  4
UNIPROTKB|H9KZ72 - symbol:SNRNP200 "Uncharacterized prote...  1575  3.5e-176  3
MGI|MGI:1925237 - symbol:Ascc3 "activating signal cointeg...  1005  6.3e-170  7
RGD|1307995 - symbol:Ascc3 "activating signal cointegrato...  1010  1.2e-169  7
UNIPROTKB|G4N5J1 - symbol:MGG_06124 "Activating signal co...   886  4.3e-168  5
POMBASE|SPBC13G1.10c - symbol:mug81 "ATP-dependent RNA he...   966  6.3e-163  5
WB|WBGene00013189 - symbol:Y54E2A.4 species:6239 "Caenorh...   802  9.9e-158  6
ASPGD|ASPL0000044033 - symbol:AN2482 species:162425 "Emer...   899  2.1e-153  5
CGD|CAL0003134 - symbol:orf19.3980 species:5476 "Candida ...   890  4.6e-133  6
SGD|S000003503 - symbol:SLH1 "Putative RNA helicase relat...   864  7.2e-125  5
GENEDB_PFALCIPARUM|PF14_0370 - symbol:PF14_0370 "RNA heli...   506  3.0e-94   7
UNIPROTKB|Q8IL78 - symbol:PF14_0370 "DEAD/DEAH box helica...   506  3.0e-94   7
UNIPROTKB|F1SU36 - symbol:SNRNP200 "Uncharacterized prote...   825  3.1e-90   2
UNIPROTKB|H9L351 - symbol:H9L351 "Uncharacterized protein...   903  1.6e-89   1
RGD|1584010 - symbol:Hfm1 "HFM1, ATP-dependent DNA helica...   427  7.9e-68   3
UNIPROTKB|B4E0P5 - symbol:SNRNP200 "U5 small nuclear ribo...   499  2.6e-67   2
UNIPROTKB|A2PYH4 - symbol:HFM1 "Probable ATP-dependent DN...   431  8.5e-65   3
TAIR|locus:2089144 - symbol:RCK "ROCK-N-ROLLERS" species:...   358  4.4e-64   3
UNIPROTKB|F1MFR1 - symbol:HFM1 "Uncharacterized protein" ...   426  6.7e-63   4
UNIPROTKB|F1S4E9 - symbol:HFM1 "Uncharacterized protein" ...   416  1.3e-61   4
UNIPROTKB|E2RA34 - symbol:HFM1 "Uncharacterized protein" ...   412  1.7e-61   4
UNIPROTKB|E2R5U9 - symbol:HFM1 "Uncharacterized protein" ...   412  2.0e-61   4
UNIPROTKB|A6NGI5 - symbol:HFM1 "Probable ATP-dependent DN...   431  1.5e-57   3
ZFIN|ZDB-GENE-061207-43 - symbol:hfm1 "HFM1, ATP-dependen...   400  1.7e-57   4
SGD|S000003220 - symbol:HFM1 "Meiosis specific DNA helica...   306  1.1e-50   3
UNIPROTKB|G4N3Z7 - symbol:MGG_05900 "Uncharacterized prot...   302  1.1e-48   3
UNIPROTKB|I3LT20 - symbol:LOC100525691 "Uncharacterized p...   422  1.4e-48   3
RGD|1561120 - symbol:Snrnp200 "small nuclear ribonucleopr...   514  6.7e-48   1
UNIPROTKB|I3LAH4 - symbol:I3LAH4 "Uncharacterized protein...   430  6.0e-39   1
ASPGD|ASPL0000030426 - symbol:AN5514 species:162425 "Emer...   245  5.2e-35   3
UNIPROTKB|F1RYR3 - symbol:LOC100517018 "Uncharacterized p...   324  1.2e-27   1
UNIPROTKB|I3LAA7 - symbol:I3LAA7 "Uncharacterized protein...   293  2.4e-24   1
UNIPROTKB|I3LVA7 - symbol:I3LVA7 "Uncharacterized protein...   276  1.5e-22   1
WB|WBGene00021905 - symbol:helq-1 species:6239 "Caenorhab...   174  3.0e-17   3
UNIPROTKB|E9PT19 - symbol:Helq "Protein Helq" species:101...   179  2.7e-16   4
UNIPROTKB|I3L8F4 - symbol:I3L8F4 "Uncharacterized protein...   217  2.9e-16   1
RGD|1309795 - symbol:Polq "polymerase (DNA directed), the...   179  2.7e-15   4
UNIPROTKB|D4A628 - symbol:Polq "Polymerase (DNA directed)...   179  2.7e-15   4
MGI|MGI:2176740 - symbol:Helq "helicase, POLQ-like" speci...   193  1.1e-14   4
UNIPROTKB|F1PXD9 - symbol:POLQ "Uncharacterized protein" ...   187  1.3e-14   4
UNIPROTKB|O75417 - symbol:POLQ "DNA polymerase theta" spe...   179  4.1e-14   3
UNIPROTKB|E9PSY5 - symbol:Helq "Protein Helq" species:101...   179  4.6e-14   4
UNIPROTKB|F1RVE2 - symbol:HELQ "Uncharacterized protein" ...   174  1.4e-13   3
UNIPROTKB|E2RST3 - symbol:HELQ "Uncharacterized protein" ...   165  2.3e-13   3
UNIPROTKB|E3W980 - symbol:HELQ "Helicase POLQ-like" speci...   180  2.6e-13   2
UNIPROTKB|Q8TDG4 - symbol:HELQ "Helicase POLQ-like" speci...   170  4.4e-13   3
UNIPROTKB|F1NYH9 - symbol:HELQ "Uncharacterized protein" ...   159  4.5e-13   3
UNIPROTKB|J9P160 - symbol:HELQ "Uncharacterized protein" ...   165  6.1e-13   4
ZFIN|ZDB-GENE-040724-232 - symbol:si:rp71-1p14.5 "si:rp71...   185  1.6e-12   3
WB|WBGene00020964 - symbol:polq-1 species:6239 "Caenorhab...   228  1.9e-12   4
ZFIN|ZDB-GENE-060503-421 - symbol:helq "helicase, POLQ-li...   204  4.7e-12   2
UNIPROTKB|Q10701 - symbol:helY "Probable helicase HelY" s...   124  6.1e-12   3
GENEDB_PFALCIPARUM|PF13_0102 - symbol:PF13_0102 "DNAJ-lik...   210  1.0e-11   2
UNIPROTKB|Q8IEC8 - symbol:PF13_0102 "DnaJ/SEC63 protein, ...   210  1.0e-11   2
FB|FBgn0002905 - symbol:mus308 "mutagen-sensitive 308" sp...   207  1.9e-11   3
DICTYBASE|DDB_G0279107 - symbol:DDB_G0279107 "Helicase PO...   190  2.0e-11   3
UNIPROTKB|F1NMU1 - symbol:POLQ "Uncharacterized protein" ...   180  1.8e-10   2
TAIR|locus:2125677 - symbol:AT4G32700 species:3702 "Arabi...   193  2.1e-10   2
ZFIN|ZDB-GENE-040718-328 - symbol:sec63 "SEC63-like (S. c...   156  3.6e-09   2
ASPGD|ASPL0000004985 - symbol:AN6007 species:162425 "Emer...   152  4.1e-09   4
UNIPROTKB|E1C0C3 - symbol:SEC63 "Uncharacterized protein"...   171  5.4e-09   2
UNIPROTKB|J9P962 - symbol:SEC63 "Translocation protein SE...   165  5.5e-09   1
GENEDB_PFALCIPARUM|PFF0100w - symbol:PFF0100w "putative A...   154  1.3e-08   3
UNIPROTKB|E1B7B1 - symbol:SEC63 "Uncharacterized protein"...   165  1.5e-08   2
UNIPROTKB|Q9UGP8 - symbol:SEC63 "Translocation protein SE...   165  1.5e-08   2
MGI|MGI:2155302 - symbol:Sec63 "SEC63-like (S. cerevisiae...   165  1.5e-08   2
POMBASE|SPAC17H9.02 - symbol:SPAC17H9.02 "TRAMP complex A...   172  1.8e-08   3
UNIPROTKB|E1BMC0 - symbol:POLQ "Uncharacterized protein" ...   175  3.6e-08   3
TAIR|locus:2026001 - symbol:MTR4 "homolog of yeast MTR4" ...   126  5.5e-08   3
TAIR|locus:2090744 - symbol:AT3G28870 "AT3G28870" species...   159  6.0e-08   1
POMBASE|SPCC550.03c - symbol:SPCC550.03c "Ski complex RNA...   133  1.0e-07   3
FB|FBgn0035771 - symbol:sec63 "sec63" species:7227 "Droso...   154  1.3e-07   3
WB|WBGene00008502 - symbol:skih-2 species:6239 "Caenorhab...   149  1.4e-07   3
FB|FBgn0002899 - symbol:mus301 "mutagen-sensitive 301" sp...   152  1.4e-07   3

WARNING:  Descriptions of 45 database sequences were not reported due to the
          limiting value of parameter V = 100.


>FB|FBgn0263599 [details] [associations]
            symbol:l(3)72Ab "lethal (3) 72Ab" species:7227 "Drosophila
            melanogaster" [GO:0030532 "small nuclear ribonucleoprotein complex"
            evidence=ISS] [GO:0005682 "U5 snRNP" evidence=ISS] [GO:0003724 "RNA
            helicase activity" evidence=ISS] [GO:0008380 "RNA splicing"
            evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IC]
            [GO:0000381 "regulation of alternative mRNA splicing, via
            spliceosome" evidence=IMP] [GO:0007067 "mitosis" evidence=IMP]
            [GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
            [GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
            [GO:0071011 "precatalytic spliceosome" evidence=IDA]
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE014296
            GO:GO:0007067 GO:GO:0003676 GO:GO:0071011 GO:GO:0000398
            GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
            eggNOG:COG1204 GeneTree:ENSGT00640000091272 KO:K12854 OMA:KWDVLSR
            GO:GO:0004004 GO:GO:0000381 EMBL:BT016121 EMBL:AY069270
            RefSeq:NP_648818.3 UniGene:Dm.973 ProteinModelPortal:Q9VUV9
            SMR:Q9VUV9 IntAct:Q9VUV9 STRING:Q9VUV9 PaxDb:Q9VUV9 PRIDE:Q9VUV9
            EnsemblMetazoa:FBtr0075527 GeneID:39737 KEGG:dme:Dmel_CG5931
            FlyBase:FBgn0036548 InParanoid:Q9VUV9 OrthoDB:EOG4S4MWW
            PhylomeDB:Q9VUV9 GenomeRNAi:39737 NextBio:815125 Bgee:Q9VUV9
            GermOnline:CG5931 Uniprot:Q9VUV9
        Length = 2142

 Score = 1927 (683.4 bits), Expect = 0., Sum P(4) = 0.
 Identities = 388/563 (68%), Positives = 442/563 (78%)

Query:     1 MADAAARQLQYEYKANSNLVLQADVRLIERRSRDEATGEVCSLVGKLEGTRMGDRFMRTK 60
             MADAAARQLQYEYKANSNLVLQADVRLIER  RDEATGEVCSLVGKL+GTRMGDR+ RTK
Sbjct:     1 MADAAARQLQYEYKANSNLVLQADVRLIERPRRDEATGEVCSLVGKLDGTRMGDRYQRTK 60

Query:    61 PIKAEERKVKRQKRDEAQYDFTRMKGATLLSEGVDEMVGIIYRPKTQETRQTYEVLLSFI 120
             P K EERKVKRQKRDEAQYDF RMKGATLLSEG+DEMVGI+YRPKTQETRQTYEVLLSFI
Sbjct:    61 PEKTEERKVKRQKRDEAQYDFERMKGATLLSEGIDEMVGIVYRPKTQETRQTYEVLLSFI 120

Query:   121 QEALGDQPRDILCGAADEVLTVLKNDRMXXXXXXXXTENLLGSLAEERFALLVNLGKKIT 180
             QEALGDQPRDILCGAADE+L VLKNDR+         ++LLG++ +ERFALLVNLGKKIT
Sbjct:   121 QEALGDQPRDILCGAADEILAVLKNDRLKDRERKKDIDSLLGAVTDERFALLVNLGKKIT 180

Query:   181 DFGAEQ-KSTTA----EENIDDTYGINVQFXXXXXXXXXXTFXXXXXXXXXXXXXXXXXX 235
             DFG++   + TA    EE ID+TYGINVQF           +                  
Sbjct:   181 DFGSDAVNALTAAPNNEEQIDETYGINVQFEESEEESDNDMYGEIRDDDAQDEGEEARID 240

Query:   236 NTAIHAENLAGGEDAEGTGRKKDKSLHPLDIDAYWLQRRLSKIYDDAMVSQAKAGEVLNI 295
             +T +HAENLA  E A     KK++SLHPLDIDAYWLQR LSK Y DAMVSQ+KA +VL I
Sbjct:   241 HT-LHAENLANEEAANNV--KKERSLHPLDIDAYWLQRCLSKFYKDAMVSQSKAADVLKI 297

Query:   296 LKSAGDDRDAENQLVLLLGYDCFDFIKMLKKYRQMILYCTLLASSQSESERQKLRDTMSE 355
             LK A DDRD ENQLVLLLGYDCFDFIK LK  RQM+LYCT+LAS+Q++SERQ++R+ M  
Sbjct:   298 LKDAADDRDCENQLVLLLGYDCFDFIKQLKLNRQMVLYCTMLASAQTDSERQRIREKMRG 357

Query:   356 DPALAKILRQLDTGKNEDGDANDSADARQSTSIRHQMXXXXXXXXXXXXXTRQVLDLEDL 415
             + ALAKILRQLDTGK+ED    +  +AR S   +                 RQ+L+LE++
Sbjct:   358 NSALAKILRQLDTGKSED---QEEGEARGSKRGKGDAEDGGAAAAGQVAGVRQLLELEEM 414

Query:   416 QFSSGSHFMSNKRCELPDGSFRKQRKGYEEVHVPALKPKPMGPDETLVPIDKLPRYVQHA 475
              F+ GSHFM+NKRC+LPDGS+RKQRKGYEEVHVPALKP P   +E L P+DKLP+YVQ  
Sbjct:   415 AFTQGSHFMANKRCQLPDGSYRKQRKGYEEVHVPALKPVPFDANEELQPVDKLPKYVQPV 474

Query:   476 FEDFKTLNRIQSRLCKSALESDENLLLCAPTGAGKTNVALLCMLQEIGKHINADGTINAD 535
             FE FKTLNRIQSRL K+AL+SDEN+LLCAPTGAGKTNVALL M++EIGKHIN DGTINA 
Sbjct:   475 FEGFKTLNRIQSRLYKAALDSDENMLLCAPTGAGKTNVALLTMMREIGKHINEDGTINAQ 534

Query:   536 EFKIIYVAPMRSLVQEMVGNFGK 558
             +FKIIYVAPM+SLVQEMVGNFG+
Sbjct:   535 DFKIIYVAPMKSLVQEMVGNFGR 557

 Score = 1900 (673.9 bits), Expect = 0., Sum P(4) = 0.
 Identities = 365/444 (82%), Positives = 393/444 (88%)

Query:  1025 TVVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDV 1084
             T VDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQ+YNPEKGRWVEL ALDV
Sbjct:   790 TRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYNPEKGRWVELSALDV 849

Query:  1085 LQMLGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMISKLPDMLNAEIVLGT 1144
             LQMLGRAGRPQYDTKGEG+LITNHSELQ+YLSLLN QLP+ESQ ISKLPDMLNAEIVLGT
Sbjct:   850 LQMLGRAGRPQYDTKGEGILITNHSELQFYLSLLNQQLPIESQFISKLPDMLNAEIVLGT 909

Query:  1145 VQNLKDAVTWLGYTYLYIRMLRAPNLYGISHDALKEDPLLECHRADLIHTAALHLERSGL 1204
             VQ+L+DAV WLGYTYLYIRMLR P LYG+SHDA+K DPLLE HRADL+HTAA  LERSGL
Sbjct:   910 VQHLQDAVNWLGYTYLYIRMLRNPTLYGVSHDAIKADPLLEQHRADLLHTAACCLERSGL 969

Query:  1205 IKYDRKSGHMQVTELGRIASHYYCTHETMATYNQLLKPTLSEIELFRVFSLSGEFRHITV 1264
             IKYDRK+GH QVT+LGRIASHYY THETM TYNQLLK TLSEIELFRVFSLS EFRHI+V
Sbjct:   970 IKYDRKTGHFQVTDLGRIASHYYLTHETMLTYNQLLKQTLSEIELFRVFSLSSEFRHISV 1029

Query:  1265 RXXXXXXXXXXXXRAPIPIKESTDEPSAKVNILLQAYISQLKLEGFALMSDMVFVTQSAA 1324
             R            R PIPIKES +E SAKVN+LLQAYISQLKLEGFALMSDMVF+TQSAA
Sbjct:  1030 REEEKLELQKLMERVPIPIKESIEEHSAKVNVLLQAYISQLKLEGFALMSDMVFITQSAA 1089

Query:  1325 RLMRAIFEIVLYRGWAQLADKALSLCKMVDRRMWQSMSPLRQFRXXXXXXXXXXXXXNFP 1384
             RLMRAIFEIVL RGWAQLADK L+LCKM+DRRMWQSM+PLRQF+             +FP
Sbjct:  1090 RLMRAIFEIVLTRGWAQLADKTLTLCKMIDRRMWQSMTPLRQFKKMPDEIAKKLEKKHFP 1149

Query:  1385 WERLYDLGPNEIGELIRVPKLGKTIHKYVHQFPKLELATHIQPITRSTLRVELTISPDFQ 1444
             W RLYDL P+E+GELIRVPKLGKTIHK+VHQFPKLEL+THIQPITR TLRVELTI+PDFQ
Sbjct:  1150 WGRLYDLEPHELGELIRVPKLGKTIHKFVHQFPKLELSTHIQPITRGTLRVELTITPDFQ 1209

Query:  1445 WDEKLHGGSEGFWILVEDVDSEAI 1468
             WDEK+HG SEGFW+L+EDVDSE I
Sbjct:  1210 WDEKVHGQSEGFWVLIEDVDSELI 1233

 Score = 1004 (358.5 bits), Expect = 0., Sum P(4) = 0.
 Identities = 191/213 (89%), Positives = 207/213 (97%)

Query:   815 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 874
             DEIHLLHDERGPVLEAL+ARTIRNIE TQE+VRLVGLSATLPNY+DVAT LR+KP+ GLF
Sbjct:   615 DEIHLLHDERGPVLEALVARTIRNIETTQEEVRLVGLSATLPNYQDVATFLRVKPDKGLF 674

Query:   875 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQLLVFVHSRKETGKT 934
             YFDNS+RPV+LEQQYIGVTEKKALKRFQVMN+IVYEK MEHAGRNQ+LVFVHSRKETGKT
Sbjct:   675 YFDNSYRPVSLEQQYIGVTEKKALKRFQVMNEIVYEKTMEHAGRNQVLVFVHSRKETGKT 734

Query:   935 ARAIRDMCLEKDTLGQFLREGSASMEVLRTEADQVKNGELRDLLPYGFAIHHAGMTRVDR 994
             ARA+RDMCLE+DTLG FL+EGSASMEVLRTEA+QVKN EL++LLPYGFAIHHAGMTRVDR
Sbjct:   735 ARAVRDMCLEQDTLGSFLKEGSASMEVLRTEAEQVKNTELKELLPYGFAIHHAGMTRVDR 794

Query:   995 TLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
             TLVEDLFADRHIQVLVSTATLAWGVNLPAHTV+
Sbjct:   795 TLVEDLFADRHIQVLVSTATLAWGVNLPAHTVI 827

 Score = 876 (313.4 bits), Expect = 0., Sum P(4) = 0.
 Identities = 165/226 (73%), Positives = 186/226 (82%)

Query:  1461 EDVDSEAIRLIQACVDVLSSNGWLSPAVAAMEVAQMITQAMWSKDSYLKQLPHFNADIIK 1520
             E + S+AIRLIQACVDVLSSNGWLSPAVAAME+AQM+TQAMWSKDSYLKQLPHF+ +I+K
Sbjct:  1917 EQILSKAIRLIQACVDVLSSNGWLSPAVAAMELAQMVTQAMWSKDSYLKQLPHFSPEIVK 1976

Query:  1521 RCTEKGVETVFDIMXXXXXXXXXXXXXXXXXXADVARFCNRYPNIELSYEVLNKDRIXXX 1580
             RCTEK +ETVFDIM                  ADVARFCNRYPNIEL+YEV++KDRI   
Sbjct:  1977 RCTEKKIETVFDIMELEDEDRTRLLQLSDLQMADVARFCNRYPNIELNYEVVDKDRINSG 2036

Query:  1581 XXXXXXXXLDREDEVTGPVIAPFYPQKREEGWWVVIGDPKTNSLLSIKRLTLQQKAKIKL 1640
                     L+REDEVTGPVIAPF+PQKREEGWWVVIGDPKTNSLLSIKRLTLQQKAK+KL
Sbjct:  2037 STVNVVVQLEREDEVTGPVIAPFFPQKREEGWWVVIGDPKTNSLLSIKRLTLQQKAKVKL 2096

Query:  1641 DFVAPNPGHHSYALYFMSDAYLGCDQEYKFSIDVSEYYSGGESDSD 1686
             DFVAP+PG H Y LY+MSD+YLGCDQEYKFSI+V ++ S  ES+SD
Sbjct:  2097 DFVAPSPGKHDYTLYYMSDSYLGCDQEYKFSIEVGDFQSESESESD 2142

 Score = 505 (182.8 bits), Expect = 0., Sum P(4) = 0.
 Identities = 96/109 (88%), Positives = 105/109 (96%)

Query:   559 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 618
             DEIHLLHDERGPVLEAL+ARTIRNIE TQE+VRLVGLSATLPNY+DVAT LR+KP+ GLF
Sbjct:   615 DEIHLLHDERGPVLEALVARTIRNIETTQEEVRLVGLSATLPNYQDVATFLRVKPDKGLF 674

Query:   619 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQLLV 667
             YFDNS+RPV+LEQQYIGVTEKKALKRFQVMN+IVYEK MEHAGRNQ+LV
Sbjct:   675 YFDNSYRPVSLEQQYIGVTEKKALKRFQVMNEIVYEKTMEHAGRNQVLV 723

 Score = 468 (169.8 bits), Expect = 0., Sum P(3) = 0.
 Identities = 133/485 (27%), Positives = 230/485 (47%)

Query:  1014 TLAWGVNLPAH---TVVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYN 1070
             TLA GV    H   +  D  LVE LF    +QV V +  L WG+++ AH VII  TQ YN
Sbjct:  1611 TLAQGVAY-LHEGLSASDHRLVEQLFDSGAVQVAVISRDLCWGMSISAHLVIIMDTQFYN 1669

Query:  1071 PEKGRWVELGALDVLQMLGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMIS 1130
              +   + +    DVLQM+GRA RP  D   + VL+   S+  ++   +N  LP+ES +  
Sbjct:  1670 GKNHSYEDYPITDVLQMIGRANRPNEDADAKCVLMCQSSKKDFFKKFINEPLPIESHLDH 1729

Query:  1131 KLPDMLNAEIVLGTVQNLKDAVTWLGYTYLYIRMLRAPNLY---GISHDALKEDPLLECH 1187
             ++ D  NAE+V  T++N +DAV +L +T+LY R+ + PN Y   G++H  L +      H
Sbjct:  1730 RMHDHFNAEVVTKTIENKQDAVDYLTWTFLYRRLTQNPNYYNLQGVTHRHLSD------H 1783

Query:  1188 RADLIHTAALHLERSGLIKYDRKSGHMQVTELGRIASHYYCTHETMATYNQLLKPTLSEI 1247
              ++L+      LE+S  I  +     + +  LG IA++YY  + T+  ++  L       
Sbjct:  1784 LSELVENTLSDLEQSKCISVEDDMDTLPLN-LGMIAAYYYINYTTIELFSLSLNSKTKVR 1842

Query:  1248 ELFRVFSLSGEFRHITVRXXXXXXXXXXXXRAPIPI---KEST---DEPSAKVNILLQAY 1301
              L  + S + E+  + VR            R P  +    E+    ++P  K N+LLQA+
Sbjct:  1843 GLLEIISSAAEYEDVVVRHHEEQVLRTLSQRLPNKLTGPNETAPKFNDPHIKTNLLLQAH 1902

Query:  1302 ISQLKLEGFALMSDMVFVTQSAARLMRAIFEIVLYRGWAQLADKALSLCKMVDRRMWQSM 1361
             +S+L+L G  L  D   +   A RL++A  +++   GW   A  A+ L +MV + MW   
Sbjct:  1903 LSRLQL-GPELQGDTEQILSKAIRLIQACVDVLSSNGWLSPAVAAMELAQMVTQAMWSKD 1961

Query:  1362 SPLRQFRXXXXXXXXXXXXXNFPWERLYDLGPNEIGELIRVPKLGKT----IHKYVHQFP 1417
             S L+Q                   E ++D+   E  +  R+ +L       + ++ +++P
Sbjct:  1962 SYLKQLPHFSPEIVKRCTEKKI--ETVFDIMELEDEDRTRLLQLSDLQMADVARFCNRYP 2019

Query:  1418 KLELATHIQPITRSTLRVELTISPDFQWDEKLHGG----------SEGFWILVEDVDSEA 1467
              +EL   +    R      + +    + ++++ G            EG+W+++ D  + +
Sbjct:  2020 NIELNYEVVDKDRINSGSTVNVVVQLEREDEVTGPVIAPFFPQKREEGWWVVIGDPKTNS 2079

Query:  1468 IRLIQ 1472
             +  I+
Sbjct:  2080 LLSIK 2084

 Score = 429 (156.1 bits), Expect = 0., Sum P(4) = 0.
 Identities = 99/190 (52%), Positives = 121/190 (63%)

Query:   669 TLRVELTISPDFQWDEKLHGGSEGFWILVEDVDSEVVLHHEYFLLKSRYATDDHVVKFFV 728
             TLRVELTI+PDFQWDEK+HG SEGFW+L+EDVDSE++LHHE+FLLK +Y+ D+H +KFFV
Sbjct:  1197 TLRVELTITPDFQWDEKVHGQSEGFWVLIEDVDSELILHHEFFLLKQKYSQDEHQLKFFV 1256

Query:   729 PVFEPLPPQYFLRIVSDRWIGAETILPVSFR---LPRGAGKTNVALLCMLQEIGKHINAD 785
             PVFEPLPPQYFLRIVSDRWIGAET LPVSFR   LP         LL  LQ +   I+A 
Sbjct:  1257 PVFEPLPPQYFLRIVSDRWIGAETQLPVSFRHLILPE-KNMPPTELLD-LQPLP--ISA- 1311

Query:   786 GTINADEFKIIYVA--PMRSLVQEMVGN--FGKDEIHLLHDERGPVLEALIARTIRNIEA 841
               +   +F+  Y    P  + +Q  V N  +  DE   +    G     +    I  +  
Sbjct:  1312 --LRQPKFESFYSQRFPQFNPIQTQVFNAVYNSDENVFVGAPTGSGKMTIAEFAIMRLFT 1369

Query:   842 TQEDVRLVGL 851
             TQ D R V L
Sbjct:  1370 TQSDARCVYL 1379

 Score = 261 (96.9 bits), Expect = 0., Sum P(4) = 0.
 Identities = 79/270 (29%), Positives = 132/270 (48%)

Query:   765 GKTNVALLCMLQEIGKHIN--ADGTI---NADEFKIIYVA-PMRSLVQEMVGNFGKDEIH 818
             G  ++ ++ +  E G  +   A G +    AD++ ++      R  VQ +V  F  DE+ 
Sbjct:  1398 GSLDIKVVKLTGETGTDLKLIAKGQLVITTADKWDVLSRRWKQRKNVQ-LVNLFIVDELQ 1456

Query:   819 LLHDERGPVLEALIARTIRNIEAT-QEDVRLVGLSATLPNYKDVATLLRIKPETGLFYFD 877
             L+  E GPVLE + +R +R I +  ++ +R+V LSA+L + +DVA  L   P    F F 
Sbjct:  1457 LVGGEEGPVLEIVCSR-MRYISSQIEKQIRIVALSASLTDARDVAQWLGCNPNA-TFNFH 1514

Query:   878 NSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQLLVFVHSRKETGKTARA 937
              S RP+ LE    G        R   M+  VY  +++++    ++VFV SRK+   TA  
Sbjct:  1515 PSVRPIPLELHIQGYNVTHNATRIATMSKPVYNAILKYSAHKPVIVFVSSRKQARLTAID 1574

Query:   938 IRDMCLEKDTLGQFLREGSASMEVLRTEADQVKNGELRDLLPYGFAIHHAGMTRVDRTLV 997
             +           +F     A  E ++   +++ +  L++ L  G A  H G++  D  LV
Sbjct:  1575 VLTYAASDLQPNRFFH---AEEEDIKPFLERMTDKTLKETLAQGVAYLHEGLSASDHRLV 1631

Query:   998 EDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
             E LF    +QV V +  L WG+++ AH V+
Sbjct:  1632 EQLFDSGAVQVAVISRDLCWGMSISAHLVI 1661

 Score = 241 (89.9 bits), Expect = 0., Sum P(4) = 0.
 Identities = 55/95 (57%), Positives = 67/95 (70%)

Query:   721 DHVVKFFVPVFEPLPPQYFLRIVSDRWIGA-ETILPVSFRLPRGAGKTNVALLCMLQEIG 779
             D + K+  PVFE    +   RI S  +  A ++   +    P GAGKTNVALL M++EIG
Sbjct:   465 DKLPKYVQPVFEGF--KTLNRIQSRLYKAALDSDENMLLCAPTGAGKTNVALLTMMREIG 522

Query:   780 KHINADGTINADEFKIIYVAPMRSLVQEMVGNFGK 814
             KHIN DGTINA +FKIIYVAPM+SLVQEMVGNFG+
Sbjct:   523 KHINEDGTINAQDFKIIYVAPMKSLVQEMVGNFGR 557

 Score = 146 (56.5 bits), Expect = 6.8e-303, Sum P(3) = 6.8e-303
 Identities = 48/166 (28%), Positives = 82/166 (49%)

Query:   509 GKTNVALLCMLQEIGKHIN--ADGTI---NADEFKIIYVA-PMRSLVQEMVGNFGKDEIH 562
             G  ++ ++ +  E G  +   A G +    AD++ ++      R  VQ +V  F  DE+ 
Sbjct:  1398 GSLDIKVVKLTGETGTDLKLIAKGQLVITTADKWDVLSRRWKQRKNVQ-LVNLFIVDELQ 1456

Query:   563 LLHDERGPVLEALIARTIRNIEAT-QEDVRLVGLSATLPNYKDVATLLRIKPETGLFYFD 621
             L+  E GPVLE + +R +R I +  ++ +R+V LSA+L + +DVA  L   P    F F 
Sbjct:  1457 LVGGEEGPVLEIVCSR-MRYISSQIEKQIRIVALSASLTDARDVAQWLGCNPNA-TFNFH 1514

Query:   622 NSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQLLV 667
              S RP+ LE    G        R   M+  VY  +++++    ++V
Sbjct:  1515 PSVRPIPLELHIQGYNVTHNATRIATMSKPVYNAILKYSAHKPVIV 1560

 Score = 118 (46.6 bits), Expect = 1.8e-313, Sum P(3) = 1.8e-313
 Identities = 66/291 (22%), Positives = 118/291 (40%)

Query:  1394 NEIGELIRVPKLGKTI-HKYVHQFPKLELATHIQ----PITRSTLRVELTISPDFQ-WDE 1447
             +EI EL RV  L     H  V +  KLEL   ++    PI  S       ++   Q +  
Sbjct:  1010 SEI-ELFRVFSLSSEFRHISVREEEKLELQKLMERVPIPIKESIEEHSAKVNVLLQAYIS 1068

Query:  1448 KLHGGSEGFWILVEDV--DSEAIRLIQACVDVLSSNGWLSPAVAAMEVAQMITQAMWSKD 1505
             +L    EGF ++ + V     A RL++A  +++ + GW   A   + + +MI + MW   
Sbjct:  1069 QLK--LEGFALMSDMVFITQSAARLMRAIFEIVLTRGWAQLADKTLTLCKMIDRRMWQSM 1126

Query:  1506 SYLKQLPHFNADIIKRCTEKGVETVFDIMXXXXXXXXXXXXXXXXXXADVARFCNRYPNI 1565
             + L+Q      +I K+  +K     +  +                    + +F +++P +
Sbjct:  1127 TPLRQFKKMPDEIAKKLEKKHFP--WGRLYDLEPHELGELIRVPKLGKTIHKFVHQFPKL 1184

Query:  1566 ELSYEVLNKDRIXXXXXXXXXXXLDREDEVTGPVIAPFYPQKREEGWWVVIGDPKTNSLL 1625
             ELS  +    R               +++V G          + EG+WV+I D  +  +L
Sbjct:  1185 ELSTHIQPITRGTLRVELTITPDFQWDEKVHG----------QSEGFWVLIEDVDSELIL 1234

Query:  1626 SIKRLTLQQKA---KIKLDFVAP--NPGHHSYALYFMSDAYLGCDQEYKFS 1671
               +   L+QK    + +L F  P   P    Y L  +SD ++G + +   S
Sbjct:  1235 HHEFFLLKQKYSQDEHQLKFFVPVFEPLPPQYFLRIVSDRWIGAETQLPVS 1285

 Score = 95 (38.5 bits), Expect = 1.3e-109, Sum P(3) = 1.3e-109
 Identities = 25/76 (32%), Positives = 40/76 (52%)

Query:   451 LKPKPMGPDETL----VPIDKL--PRYVQHAFEDFKTLNRIQSRLCKSALESDENLLLCA 504
             L  K M P E L    +PI  L  P++     + F   N IQ+++  +   SDEN+ + A
Sbjct:  1291 LPEKNMPPTELLDLQPLPISALRQPKFESFYSQRFPQFNPIQTQVFNAVYNSDENVFVGA 1350

Query:   505 PTGAGKTNVALLCMLQ 520
             PTG+GK  +A   +++
Sbjct:  1351 PTGSGKMTIAEFAIMR 1366

 Score = 48 (22.0 bits), Expect = 2.4e-253, Sum P(3) = 2.4e-253
 Identities = 14/61 (22%), Positives = 28/61 (45%)

Query:   691 EGFWILVEDVDSEVVLHHEYFLLKSRYATDDHVVKFFVPVFEPLPPQYFLRIVSDRWIGA 750
             EG+W+++ D  +  +L  +   L+ +       + F  P   P    Y L  +SD ++G 
Sbjct:  2066 EGWWVVIGDPKTNSLLSIKRLTLQQKAKVK---LDFVAP--SPGKHDYTLYYMSDSYLGC 2120

Query:   751 E 751
             +
Sbjct:  2121 D 2121

 Score = 38 (18.4 bits), Expect = 0., Sum P(4) = 0.
 Identities = 6/18 (33%), Positives = 11/18 (61%)

Query:  1513 HFNADIIKRCTEKGVETV 1530
             HFNA+++ +  E   + V
Sbjct:  1734 HFNAEVVTKTIENKQDAV 1751

 Score = 37 (18.1 bits), Expect = 1.7e-81, Sum P(2) = 1.7e-81
 Identities = 8/36 (22%), Positives = 19/36 (52%)

Query:   269 YWLQRRLSKIYDDAMVSQAKAGEVLNILKSAGDDRD 304
             Y++     +++  ++ S+ K   +L I+ SA +  D
Sbjct:  1821 YYINYTTIELFSLSLNSKTKVRGLLEIISSAAEYED 1856


>UNIPROTKB|O75643 [details] [associations]
            symbol:SNRNP200 "U5 small nuclear ribonucleoprotein 200 kDa
            helicase" species:9606 "Homo sapiens" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005681 "spliceosomal complex" evidence=IDA] [GO:0000398 "mRNA
            splicing, via spliceosome" evidence=IC;IDA;TAS] [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=IDA] [GO:0071013
            "catalytic step 2 spliceosome" evidence=IDA] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0000354 "cis assembly of pre-catalytic
            spliceosome" evidence=IC] [GO:0005654 "nucleoplasm" evidence=TAS]
            [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467 "gene
            expression" evidence=TAS] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IDA] [GO:0005682 "U5 snRNP" evidence=IDA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=IDA] Reactome:REACT_71 InterPro:IPR001650
            InterPro:IPR003593 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00382 SMART:SM00490 GO:GO:0005524
            GO:GO:0005654 Reactome:REACT_1675 GO:GO:0005682 GO:GO:0003676
            Orphanet:791 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889 SMART:SM00611
            SMART:SM00973 eggNOG:COG1204 HOVERGEN:HBG051896 KO:K12854
            OMA:KWDVLSR GO:GO:0008026 GO:GO:0000354 EMBL:AY572488 EMBL:AK024391
            EMBL:AK090671 EMBL:AB018331 EMBL:Z70200 EMBL:BC065924 EMBL:BC007577
            IPI:IPI00168235 IPI:IPI00420014 RefSeq:NP_054733.2
            UniGene:Hs.246112 PDB:2Q0Z PDB:4F91 PDB:4F92 PDB:4F93 PDBsum:2Q0Z
            PDBsum:4F91 PDBsum:4F92 PDBsum:4F93 ProteinModelPortal:O75643
            SMR:O75643 IntAct:O75643 MINT:MINT-5003904 STRING:O75643
            PhosphoSite:O75643 PaxDb:O75643 PeptideAtlas:O75643 PRIDE:O75643
            Ensembl:ENST00000323853 GeneID:23020 KEGG:hsa:23020 UCSC:uc002svu.3
            CTD:23020 GeneCards:GC02M096940 H-InvDB:HIX0002273 HGNC:HGNC:30859
            HPA:HPA029321 MIM:601664 MIM:610359 neXtProt:NX_O75643
            PharmGKB:PA164726004 InParanoid:O75643 OrthoDB:EOG4WM4SS
            PhylomeDB:O75643 ChiTaRS:SNRNP200 EvolutionaryTrace:O75643
            GenomeRNAi:23020 NextBio:43966 ArrayExpress:O75643 Bgee:O75643
            CleanEx:HS_SNRNP200 Genevestigator:O75643
            GermOnline:ENSG00000144028 Uniprot:O75643
        Length = 2136

 Score = 1815 (644.0 bits), Expect = 0., Sum P(5) = 0.
 Identities = 344/444 (77%), Positives = 385/444 (86%)

Query:  1025 TVVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDV 1084
             T VDRTLVEDLFAD+HIQVLVSTATLAWGVNLPAHTVIIKGTQ+Y+PEKGRW ELGALD+
Sbjct:   790 TRVDRTLVEDLFADKHIQVLVSTATLAWGVNLPAHTVIIKGTQVYSPEKGRWTELGALDI 849

Query:  1085 LQMLGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMISKLPDMLNAEIVLGT 1144
             LQMLGRAGRPQYDTKGEG+LIT+H ELQYYLSLLN QLP+ESQM+SKLPDMLNAEIVLG 
Sbjct:   850 LQMLGRAGRPQYDTKGEGILITSHGELQYYLSLLNQQLPIESQMVSKLPDMLNAEIVLGN 909

Query:  1145 VQNLKDAVTWLGYTYLYIRMLRAPNLYGISHDALKEDPLLECHRADLIHTAALHLERSGL 1204
             VQN KDAV WLGY YLYIRMLR+P LYGISHD LK DPLL+  R DL+HTAAL L+++ L
Sbjct:   910 VQNAKDAVNWLGYAYLYIRMLRSPTLYGISHDDLKGDPLLDQRRLDLVHTAALMLDKNNL 969

Query:  1205 IKYDRKSGHMQVTELGRIASHYYCTHETMATYNQLLKPTLSEIELFRVFSLSGEFRHITV 1264
             +KYD+K+G+ QVTELGRIASHYY T++T+ TYNQLLKPTLSEIELFRVFSLS EF++ITV
Sbjct:   970 VKYDKKTGNFQVTELGRIASHYYITNDTVQTYNQLLKPTLSEIELFRVFSLSSEFKNITV 1029

Query:  1265 RXXXXXXXXXXXXRAPIPIKESTDEPSAKVNILLQAYISQLKLEGFALMSDMVFVTQSAA 1324
             R            R PIP+KES +EPSAK+N+LLQA+ISQLKLEGFALM+DMV+VTQSA 
Sbjct:  1030 REEEKLELQKLLERVPIPVKESIEEPSAKINVLLQAFISQLKLEGFALMADMVYVTQSAG 1089

Query:  1325 RLMRAIFEIVLYRGWAQLADKALSLCKMVDRRMWQSMSPLRQFRXXXXXXXXXXXXXNFP 1384
             RLMRAIFEIVL RGWAQL DK L+LCKM+D+RMWQSM PLRQFR             NFP
Sbjct:  1090 RLMRAIFEIVLNRGWAQLTDKTLNLCKMIDKRMWQSMCPLRQFRKLPEEVVKKIEKKNFP 1149

Query:  1385 WERLYDLGPNEIGELIRVPKLGKTIHKYVHQFPKLELATHIQPITRSTLRVELTISPDFQ 1444
             +ERLYDL  NEIGELIR+PK+GKTIHKYVH FPKLEL+ H+QPITRSTL+VELTI+PDFQ
Sbjct:  1150 FERLYDLNHNEIGELIRMPKMGKTIHKYVHLFPKLELSVHLQPITRSTLKVELTITPDFQ 1209

Query:  1445 WDEKLHGGSEGFWILVEDVDSEAI 1468
             WDEK+HG SE FWILVEDVDSE I
Sbjct:  1210 WDEKVHGSSEAFWILVEDVDSEVI 1233

 Score = 1701 (603.8 bits), Expect = 0., Sum P(5) = 0.
 Identities = 340/561 (60%), Positives = 414/561 (73%)

Query:     1 MADAAARQLQYEYKANSNLVLQADVRLIERRSRDEATGEVCSLVGKLEGTRMGDRFMRTK 60
             MAD  AR LQYEYKANSNLVLQAD  LI+R  RDE TGEV SLVGKLEGTRMGD+  RTK
Sbjct:     1 MADVTARSLQYEYKANSNLVLQADRSLIDRTRRDEPTGEVLSLVGKLEGTRMGDKAQRTK 60

Query:    61 PIKAEERKVKRQKRDEAQYDFTRMKGATLLSEGVDEMVGIIYRPKTQETRQTYEVLLSFI 120
             P   EER+ KR+KRDE ++D  +MKG TLLSEG+DEMVGIIY+PKT+ETR+TYEVLLSFI
Sbjct:    61 PQMQEERRAKRRKRDEDRHDINKMKGYTLLSEGIDEMVGIIYKPKTKETRETYEVLLSFI 120

Query:   121 QEALGDQPRDILCGAADEVLTVLKNDRMXXXXXXXXTENLLGSLAEERFALLVNLGKKIT 180
             Q ALGDQPRDILCGAADEVL VLKN+++         + LLG   + R+ +LVNLGKKIT
Sbjct:   121 QAALGDQPRDILCGAADEVLAVLKNEKLRDKERRKEIDLLLGQTDDTRYHVLVNLGKKIT 180

Query:   181 DFGAEQKSTTAEENIDDTYGINVQFXXXXXXXXXXTFXXXXXXXXXXXXXXXXXXNTAIH 240
             D+G +++    ++NID+TYG+NVQF           +                       
Sbjct:   181 DYGGDKEIQNMDDNIDETYGVNVQFESDEEEGDEDVYGEVREEASDDDMEGDEAVVRCTL 240

Query:   241 AENL-AGGEDAEGTGRKKDKSLHPLDIDAYWLQRRLSKIYDDAMVSQAKAGEVLNILKSA 299
             + NL A GE    + +KKD  LHP DIDA+WLQR+LS+ YDDA+VSQ KA EVL ILK+A
Sbjct:   241 SANLVASGELM--SSKKKD--LHPRDIDAFWLQRQLSRFYDDAIVSQKKADEVLEILKTA 296

Query:   300 GDDRDAENQLVLLLGYDCFDFIKMLKKYRQMILYCTLLASSQSESERQKLRDTMSEDPAL 359
              DDR+ ENQLVLLLG++ FDFIK+L+++R MILYCTLLAS+QSE+E++++   M  DP L
Sbjct:   297 SDDRECENQLVLLLGFNTFDFIKVLRQHRMMILYCTLLASAQSEAEKERIMGKMEADPEL 356

Query:   360 AKILRQLDTGKNED--GDANDSADARQSTSIRHQMXXXXXXXXXXXXXTRQVLDLEDLQF 417
             +K L QL   + ED   +     +  + + +   +              RQVLDLEDL F
Sbjct:   357 SKFLYQLHETEKEDLIREERSRRERVRQSRMDTDLETMDLDQGGEALAPRQVLDLEDLVF 416

Query:   418 SSGSHFMSNKRCELPDGSFRKQRKGYEEVHVPALKPKPMGPDETLVPIDKLPRYVQHAFE 477
             + GSHFM+NKRC+LPDGSFR+QRKGYEEVHVPALKPKP G +E L+P++KLP+Y Q  FE
Sbjct:   417 TQGSHFMANKRCQLPDGSFRRQRKGYEEVHVPALKPKPFGSEEQLLPVEKLPKYAQAGFE 476

Query:   478 DFKTLNRIQSRLCKSALESDENLLLCAPTGAGKTNVALLCMLQEIGKHINADGTINADEF 537
              FKTLNRIQS+L ++ALE+DENLLLCAPTGAGKTNVAL+CML+EIGKHIN DGTIN D+F
Sbjct:   477 GFKTLNRIQSKLYRAALETDENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDF 536

Query:   538 KIIYVAPMRSLVQEMVGNFGK 558
             KIIY+APMRSLVQEMVG+FGK
Sbjct:   537 KIIYIAPMRSLVQEMVGSFGK 557

 Score = 973 (347.6 bits), Expect = 0., Sum P(5) = 0.
 Identities = 184/213 (86%), Positives = 201/213 (94%)

Query:   815 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 874
             DEIHLLHD+RGPVLEAL+AR IRNIE TQEDVRL+GLSATLPNY+DVAT LR+ P  GLF
Sbjct:   615 DEIHLLHDDRGPVLEALVARAIRNIEMTQEDVRLIGLSATLPNYEDVATFLRVDPAKGLF 674

Query:   875 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQLLVFVHSRKETGKT 934
             YFDNSFRPV LEQ Y+G+TEKKA+KRFQ+MN+IVYEK+MEHAG+NQ+LVFVHSRKETGKT
Sbjct:   675 YFDNSFRPVPLEQTYVGITEKKAIKRFQIMNEIVYEKIMEHAGKNQVLVFVHSRKETGKT 734

Query:   935 ARAIRDMCLEKDTLGQFLREGSASMEVLRTEADQVKNGELRDLLPYGFAIHHAGMTRVDR 994
             ARAIRDMCLEKDTLG FLREGSAS EVLRTEA+Q KN EL+DLLPYGFAIHHAGMTRVDR
Sbjct:   735 ARAIRDMCLEKDTLGLFLREGSASTEVLRTEAEQCKNLELKDLLPYGFAIHHAGMTRVDR 794

Query:   995 TLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
             TLVEDLFAD+HIQVLVSTATLAWGVNLPAHTV+
Sbjct:   795 TLVEDLFADKHIQVLVSTATLAWGVNLPAHTVI 827

 Score = 825 (295.5 bits), Expect = 0., Sum P(5) = 0.
 Identities = 157/224 (70%), Positives = 180/224 (80%)

Query:  1461 EDVDSEAIRLIQACVDVLSSNGWLSPAVAAMEVAQMITQAMWSKDSYLKQLPHFNADIIK 1520
             E++ S+AIRLIQACVDVLSSNGWLSPA+AAME+AQM+TQAMWSKDSYLKQLPHF ++ IK
Sbjct:  1913 EEILSKAIRLIQACVDVLSSNGWLSPALAAMELAQMVTQAMWSKDSYLKQLPHFTSEHIK 1972

Query:  1521 RCTEKGVETVFDIMXXXXXXXXXXXXXXXXXXADVARFCNRYPNIELSYEVLNKDRIXXX 1580
             RCT+KGVE+VFDIM                  ADVARFCNRYPNIELSYEV++KD I   
Sbjct:  1973 RCTDKGVESVFDIMEMEDEERNALLQLTDSQIADVARFCNRYPNIELSYEVVDKDSIRSG 2032

Query:  1581 XXXXXXXXLDREDEVTGPVIAPFYPQKREEGWWVVIGDPKTNSLLSIKRLTLQQKAKIKL 1640
                     L+RE+EVTGPVIAP +PQKREEGWWVVIGD K+NSL+SIKRLTLQQKAK+KL
Sbjct:  2033 GPVVVLVQLEREEEVTGPVIAPLFPQKREEGWWVVIGDAKSNSLISIKRLTLQQKAKVKL 2092

Query:  1641 DFVAPNPGHHSYALYFMSDAYLGCDQEYKFSIDVSEYYSGGESD 1684
             DFVAP  G H+Y LYFMSDAY+GCDQEYKFS+DV E  +  +SD
Sbjct:  2093 DFVAPATGAHNYTLYFMSDAYMGCDQEYKFSVDVKEAETDSDSD 2136

 Score = 490 (177.5 bits), Expect = 0., Sum P(4) = 0.
 Identities = 132/462 (28%), Positives = 230/462 (49%)

Query:  1027 VDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQ 1086
             ++R LVE LF+   IQV+V++ +L WG+N+ AH VII  TQ YN +   +V+    DVLQ
Sbjct:  1627 MERRLVEQLFSSGAIQVVVASRSLCWGMNVAAHLVIIMDTQYYNGKIHAYVDYPIYDVLQ 1686

Query:  1087 MLGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMISKLPDMLNAEIVLGTVQ 1146
             M+G A RP  D +G  V++   S+  ++   L   LPVES +   + D  NAEIV  T++
Sbjct:  1687 MVGHANRPLQDDEGRCVIMCQGSKKDFFKKFLYEPLPVESHLDHCMHDHFNAEIVTKTIE 1746

Query:  1147 NLKDAVTWLGYTYLYIRMLRAPNLY---GISHDALKEDPLLECHRADLIHTAALHLERSG 1203
             N +DAV +L +T+LY RM + PN Y   GISH  L +      H ++L+      LE+S 
Sbjct:  1747 NKQDAVDYLTWTFLYRRMTQNPNYYNLQGISHRHLSD------HLSELVEQTLSDLEQSK 1800

Query:  1204 LIKYDRKSGHMQVTELGRIASHYYCTHETMATYNQLLKPTLSEIELFRVFSLSGEFRHIT 1263
              I  + +   +    LG IA++YY  + T+  ++  L        L  + S + E+ +I 
Sbjct:  1801 CISIEDEMD-VAPLNLGMIAAYYYINYTTIELFSMSLNAKTKVRGLIEIISNAAEYENIP 1859

Query:  1264 VRXXXXXXXXXXXXRAPIPIKEST-DEPSAKVNILLQAYISQLKLEGFALMSDMVFVTQS 1322
             +R            + P  +     ++P  K N+LLQA++S+++L    L SD   +   
Sbjct:  1860 IRHHEDNLLRQLAQKVPHKLNNPKFNDPHVKTNLLLQAHLSRMQLSA-ELQSDTEEILSK 1918

Query:  1323 AARLMRAIFEIVLYRGWAQLADKALSLCKMVDRRMWQSMSPLRQFRXXXXXXXXXXXXXN 1382
             A RL++A  +++   GW   A  A+ L +MV + MW   S L+Q                
Sbjct:  1919 AIRLIQACVDVLSSNGWLSPALAAMELAQMVTQAMWSKDSYLKQLPHFTSEHIKRCTDKG 1978

Query:  1383 FPWERLYDLGPNEIGELIRVPKLGKT----IHKYVHQFPKLELATHIQPITRSTLRV--E 1436
                E ++D+   E  E   + +L  +    + ++ +++P +EL+  +  + + ++R    
Sbjct:  1979 V--ESVFDIMEMEDEERNALLQLTDSQIADVARFCNRYPNIELSYEV--VDKDSIRSGGP 2034

Query:  1437 LTISPDFQWDEKLHGG----------SEGFWILVEDVDSEAI 1468
             + +    + +E++ G            EG+W+++ D  S ++
Sbjct:  2035 VVVLVQLEREEEVTGPVIAPLFPQKREEGWWVVIGDAKSNSL 2076

 Score = 480 (174.0 bits), Expect = 0., Sum P(4) = 0.
 Identities = 88/109 (80%), Positives = 101/109 (92%)

Query:   559 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 618
             DEIHLLHD+RGPVLEAL+AR IRNIE TQEDVRL+GLSATLPNY+DVAT LR+ P  GLF
Sbjct:   615 DEIHLLHDDRGPVLEALVARAIRNIEMTQEDVRLIGLSATLPNYEDVATFLRVDPAKGLF 674

Query:   619 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQLLV 667
             YFDNSFRPV LEQ Y+G+TEKKA+KRFQ+MN+IVYEK+MEHAG+NQ+LV
Sbjct:   675 YFDNSFRPVPLEQTYVGITEKKAIKRFQIMNEIVYEKIMEHAGKNQVLV 723

 Score = 422 (153.6 bits), Expect = 0., Sum P(6) = 0.
 Identities = 73/92 (79%), Positives = 85/92 (92%)

Query:   668 STLRVELTISPDFQWDEKLHGGSEGFWILVEDVDSEVVLHHEYFLLKSRYATDDHVVKFF 727
             STL+VELTI+PDFQWDEK+HG SE FWILVEDVDSEV+LHHEYFLLK++YA D+H++ FF
Sbjct:  1196 STLKVELTITPDFQWDEKVHGSSEAFWILVEDVDSEVILHHEYFLLKAKYAQDEHLITFF 1255

Query:   728 VPVFEPLPPQYFLRIVSDRWIGAETILPVSFR 759
             VPVFEPLPPQYF+R+VSDRW+  ET LPVSFR
Sbjct:  1256 VPVFEPLPPQYFIRVVSDRWLSCETQLPVSFR 1287

 Score = 286 (105.7 bits), Expect = 0., Sum P(6) = 0.
 Identities = 79/227 (34%), Positives = 119/227 (52%)

Query:   802 RSLVQEMVGNFGKDEIHLLHDERGPVLEALIARTIRNIEATQE-DVRLVGLSATLPNYKD 860
             R  VQ  +  F  DE+HL+  E GPVLE + +R +R I +  E  +R+V LS++L N KD
Sbjct:  1442 RKNVQN-INLFVVDEVHLIGGENGPVLEVICSR-MRYISSQIERPIRIVALSSSLSNAKD 1499

Query:   861 VATLLRIKPETGLFYFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQ 920
             VA  L     T  F F  + RPV LE    G        R   M   VY  + +H+ +  
Sbjct:  1500 VAHWLGCSA-TSTFNFHPNVRPVPLELHIQGFNISHTQTRLLSMAKPVYHAITKHSPKKP 1558

Query:   921 LLVFVHSRKETGKTARAIRDMCLEKDTLGQFLREGSASMEVLRTEADQVKNGELRDLLPY 980
             ++VFV SRK+T  TA  I   C       +FL     + + L    +++ +  L++ L  
Sbjct:  1559 VIVFVPSRKQTRLTAIDILTTCAADIQRQRFLH---CTEKDLIPYLEKLSDSTLKETLLN 1615

Query:   981 GFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
             G    H G++ ++R LVE LF+   IQV+V++ +L WG+N+ AH V+
Sbjct:  1616 GVGYLHEGLSPMERRLVEQLFSSGAIQVVVASRSLCWGMNVAAHLVI 1662

 Score = 248 (92.4 bits), Expect = 0., Sum P(5) = 0.
 Identities = 46/54 (85%), Positives = 51/54 (94%)

Query:   761 PRGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNFGK 814
             P GAGKTNVAL+CML+EIGKHIN DGTIN D+FKIIY+APMRSLVQEMVG+FGK
Sbjct:   504 PTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFGK 557

 Score = 149 (57.5 bits), Expect = 6.0e-274, Sum P(3) = 6.0e-274
 Identities = 44/123 (35%), Positives = 62/123 (50%)

Query:   546 RSLVQEMVGNFGKDEIHLLHDERGPVLEALIARTIRNIEATQE-DVRLVGLSATLPNYKD 604
             R  VQ  +  F  DE+HL+  E GPVLE + +R +R I +  E  +R+V LS++L N KD
Sbjct:  1442 RKNVQN-INLFVVDEVHLIGGENGPVLEVICSR-MRYISSQIERPIRIVALSSSLSNAKD 1499

Query:   605 VATLLRIKPETGLFYFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQ 664
             VA  L     T  F F  + RPV LE    G        R   M   VY  + +H+ +  
Sbjct:  1500 VAHWLGCSA-TSTFNFHPNVRPVPLELHIQGFNISHTQTRLLSMAKPVYHAITKHSPKKP 1558

Query:   665 LLV 667
             ++V
Sbjct:  1559 VIV 1561

 Score = 101 (40.6 bits), Expect = 3.2e-309, Sum P(4) = 3.2e-309
 Identities = 42/225 (18%), Positives = 89/225 (39%)

Query:  1454 EGFWILVEDV--DSEAIRLIQACVDVLSSNGWLSPAVAAMEVAQMITQAMWSKDSYLKQL 1511
             EGF ++ + V     A RL++A  +++ + GW       + + +MI + MW     L+Q 
Sbjct:  1073 EGFALMADMVYVTQSAGRLMRAIFEIVLNRGWAQLTDKTLNLCKMIDKRMWQSMCPLRQF 1132

Query:  1512 PHFNADIIKRCTEKGVETVFDIMXXXXXXXXXXXXXXXXXXADVARFCNRYPNIELSYEV 1571
                  +++K+  +K     F+ +                    + ++ + +P +ELS  +
Sbjct:  1133 RKLPEEVVKKIEKKNFP--FERLYDLNHNEIGELIRMPKMGKTIHKYVHLFPKLELSVHL 1190

Query:  1572 LNKDRIXXXXXXXXXXXLDREDEVTGPVIAPFYPQKREEGWWVVIGDPKTNSLLSIKRLT 1631
                 R               +++V G            E +W+++ D  +  +L  +   
Sbjct:  1191 QPITRSTLKVELTITPDFQWDEKVHGS----------SEAFWILVEDVDSEVILHHEYFL 1240

Query:  1632 LQQK-AKIK--LDFVAP--NPGHHSYALYFMSDAYLGCDQEYKFS 1671
             L+ K A+ +  + F  P   P    Y +  +SD +L C+ +   S
Sbjct:  1241 LKAKYAQDEHLITFFVPVFEPLPPQYFIRVVSDRWLSCETQLPVS 1285

 Score = 97 (39.2 bits), Expect = 8.3e-107, Sum P(3) = 8.3e-107
 Identities = 29/107 (27%), Positives = 52/107 (48%)

Query:   453 PKPMGPDETLVPIDKLPRYV--QHAFED-----FKTLNRIQSRLCKSALESDENLLLCAP 505
             P+   P   L+ +  LP       AFE      F   N IQ+++  +   SD+N+ + AP
Sbjct:  1292 PEKYPPPTELLDLQPLPVSALRNSAFESLYQDKFPFFNPIQTQVFNTVYNSDDNVFVGAP 1351

Query:   506 TGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEM 552
             TG+GKT  A   +L+ +         + + E + +Y+ PM +L +++
Sbjct:  1352 TGSGKTICAEFAILRML---------LQSSEGRCVYITPMEALAEQV 1389

 Score = 48 (22.0 bits), Expect = 0., Sum P(6) = 0.
 Identities = 12/48 (25%), Positives = 25/48 (52%)

Query:   761 PRGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEM 808
             P G+GKT  A   +L+ +         + + E + +Y+ PM +L +++
Sbjct:  1351 PTGSGKTICAEFAILRML---------LQSSEGRCVYITPMEALAEQV 1389

 Score = 44 (20.5 bits), Expect = 2.0e-226, Sum P(3) = 2.0e-226
 Identities = 13/61 (21%), Positives = 27/61 (44%)

Query:   691 EGFWILVEDVDSEVVLHHEYFLLKSRYATDDHVVKFFVPVFEPLPPQYFLRIVSDRWIGA 750
             EG+W+++ D  S  ++  +   L+ +       + F  P        Y L  +SD ++G 
Sbjct:  2062 EGWWVVIGDAKSNSLISIKRLTLQQKAKVK---LDFVAPATGA--HNYTLYFMSDAYMGC 2116

Query:   751 E 751
             +
Sbjct:  2117 D 2117

 Score = 39 (18.8 bits), Expect = 0., Sum P(5) = 0.
 Identities = 7/18 (38%), Positives = 11/18 (61%)

Query:  1513 HFNADIIKRCTEKGVETV 1530
             HFNA+I+ +  E   + V
Sbjct:  1735 HFNAEIVTKTIENKQDAV 1752

 Score = 37 (18.1 bits), Expect = 0., Sum P(5) = 0.
 Identities = 6/13 (46%), Positives = 8/13 (61%)

Query:  1144 TVQNLKDAVTWLG 1156
             ++ N KD   WLG
Sbjct:  1493 SLSNAKDVAHWLG 1505


>UNIPROTKB|E1BH78 [details] [associations]
            symbol:LOC100850262 "Uncharacterized protein" species:9913
            "Bos taurus" [GO:0071013 "catalytic step 2 spliceosome"
            evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0005682 "U5
            snRNP" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
            InterPro:IPR003593 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00382 SMART:SM00490 GO:GO:0005524
            GO:GO:0008380 GO:GO:0005682 GO:GO:0003676 GO:GO:0071013
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179
            Pfam:PF02889 SMART:SM00611 SMART:SM00973
            GeneTree:ENSGT00640000091272 KO:K12854 OMA:KWDVLSR GO:GO:0008026
            CTD:23020 EMBL:DAAA02030116 IPI:IPI00695338 RefSeq:NP_001193092.1
            UniGene:Bt.7486 ProteinModelPortal:E1BH78 PRIDE:E1BH78
            Ensembl:ENSBTAT00000001130 GeneID:510529 KEGG:bta:510529
            NextBio:20869492 Uniprot:E1BH78
        Length = 2136

 Score = 1814 (643.6 bits), Expect = 0., Sum P(5) = 0.
 Identities = 343/444 (77%), Positives = 385/444 (86%)

Query:  1025 TVVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDV 1084
             T VDRTLVEDLFAD+HIQVLVSTATLAWGVNLPAHTVIIKGTQ+Y+PEKGRW ELGALD+
Sbjct:   790 TRVDRTLVEDLFADKHIQVLVSTATLAWGVNLPAHTVIIKGTQVYSPEKGRWTELGALDI 849

Query:  1085 LQMLGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMISKLPDMLNAEIVLGT 1144
             LQMLGRAGRPQYDTKGEG+LIT+H ELQYYLSLLN QLP+ESQM+SKLPDMLNAE+VLG 
Sbjct:   850 LQMLGRAGRPQYDTKGEGILITSHGELQYYLSLLNQQLPIESQMVSKLPDMLNAEVVLGN 909

Query:  1145 VQNLKDAVTWLGYTYLYIRMLRAPNLYGISHDALKEDPLLECHRADLIHTAALHLERSGL 1204
             VQN KDAV WLGY YLYIRMLR+P LYGISHD LK DPLL+  R DL+HTAAL L+++ L
Sbjct:   910 VQNAKDAVNWLGYAYLYIRMLRSPTLYGISHDDLKGDPLLDQRRLDLVHTAALMLDKNNL 969

Query:  1205 IKYDRKSGHMQVTELGRIASHYYCTHETMATYNQLLKPTLSEIELFRVFSLSGEFRHITV 1264
             +KYD+K+G+ QVTELGRIASHYY T++T+ TYNQLLKPTLSEIELFRVFSLS EF++ITV
Sbjct:   970 VKYDKKTGNFQVTELGRIASHYYITNDTVQTYNQLLKPTLSEIELFRVFSLSSEFKNITV 1029

Query:  1265 RXXXXXXXXXXXXRAPIPIKESTDEPSAKVNILLQAYISQLKLEGFALMSDMVFVTQSAA 1324
             R            R PIP+KES +EPSAK+N+LLQA+ISQLKLEGFALM+DMV+VTQSA 
Sbjct:  1030 REEEKLELQKLLERVPIPVKESIEEPSAKINVLLQAFISQLKLEGFALMADMVYVTQSAG 1089

Query:  1325 RLMRAIFEIVLYRGWAQLADKALSLCKMVDRRMWQSMSPLRQFRXXXXXXXXXXXXXNFP 1384
             RLMRAIFEIVL RGWAQL DK L+LCKM+D+RMWQSM PLRQFR             NFP
Sbjct:  1090 RLMRAIFEIVLNRGWAQLTDKTLNLCKMIDKRMWQSMCPLRQFRKLPEEVVKKIEKKNFP 1149

Query:  1385 WERLYDLGPNEIGELIRVPKLGKTIHKYVHQFPKLELATHIQPITRSTLRVELTISPDFQ 1444
             +ERLYDL  NEIGELIR+PK+GKTIHKYVH FPKLEL+ H+QPITRSTL+VELTI+PDFQ
Sbjct:  1150 FERLYDLNHNEIGELIRMPKMGKTIHKYVHLFPKLELSVHLQPITRSTLKVELTITPDFQ 1209

Query:  1445 WDEKLHGGSEGFWILVEDVDSEAI 1468
             WDEK+HG SE FWILVEDVDSE I
Sbjct:  1210 WDEKVHGSSEAFWILVEDVDSEVI 1233

 Score = 1701 (603.8 bits), Expect = 0., Sum P(5) = 0.
 Identities = 340/561 (60%), Positives = 414/561 (73%)

Query:     1 MADAAARQLQYEYKANSNLVLQADVRLIERRSRDEATGEVCSLVGKLEGTRMGDRFMRTK 60
             MAD  AR LQYEYKANSNLVLQAD  LI+R  RDE TGEV SLVGKLEGTRMGD+  RTK
Sbjct:     1 MADVTARSLQYEYKANSNLVLQADRSLIDRTRRDEPTGEVLSLVGKLEGTRMGDKAQRTK 60

Query:    61 PIKAEERKVKRQKRDEAQYDFTRMKGATLLSEGVDEMVGIIYRPKTQETRQTYEVLLSFI 120
             P   EER+ KR+KRDE ++D  +MKG TLLSEG+DEMVGIIY+PKT+ETR+TYEVLLSFI
Sbjct:    61 PQMQEERRAKRRKRDEDRHDINKMKGYTLLSEGIDEMVGIIYKPKTKETRETYEVLLSFI 120

Query:   121 QEALGDQPRDILCGAADEVLTVLKNDRMXXXXXXXXTENLLGSLAEERFALLVNLGKKIT 180
             Q ALGDQPRDILCGAADEVL VLKN+++         + LLG   + R+ +LVNLGKKIT
Sbjct:   121 QAALGDQPRDILCGAADEVLAVLKNEKLRDKERRKEIDLLLGQTDDTRYHVLVNLGKKIT 180

Query:   181 DFGAEQKSTTAEENIDDTYGINVQFXXXXXXXXXXTFXXXXXXXXXXXXXXXXXXNTAIH 240
             D+G +++    ++NID+TYG+NVQF           +                       
Sbjct:   181 DYGGDKEIQNMDDNIDETYGVNVQFESDEEEGDEDVYGEVREEASDDDMEGDEAVVRCTL 240

Query:   241 AENL-AGGEDAEGTGRKKDKSLHPLDIDAYWLQRRLSKIYDDAMVSQAKAGEVLNILKSA 299
             + NL A GE    + +KKD  LHP DIDA+WLQR+LS+ YDDA+VSQ KA EVL ILK+A
Sbjct:   241 SANLVASGELM--SSKKKD--LHPRDIDAFWLQRQLSRFYDDAIVSQKKADEVLEILKTA 296

Query:   300 GDDRDAENQLVLLLGYDCFDFIKMLKKYRQMILYCTLLASSQSESERQKLRDTMSEDPAL 359
              DDR+ ENQLVLLLG++ FDFIK+L+++R MILYCTLLAS+QSE+E++++   M  DP L
Sbjct:   297 SDDRECENQLVLLLGFNTFDFIKVLRQHRMMILYCTLLASAQSEAEKERIMGKMEADPEL 356

Query:   360 AKILRQLDTGKNED--GDANDSADARQSTSIRHQMXXXXXXXXXXXXXTRQVLDLEDLQF 417
             +K L QL   + ED   +     +  + + +   +              RQVLDLEDL F
Sbjct:   357 SKFLYQLHETEKEDLIREERSRRERVRQSRMDTDLETMDLDQGGEALAPRQVLDLEDLVF 416

Query:   418 SSGSHFMSNKRCELPDGSFRKQRKGYEEVHVPALKPKPMGPDETLVPIDKLPRYVQHAFE 477
             + GSHFM+NKRC+LPDGSFR+QRKGYEEVHVPALKPKP G +E L+P++KLP+Y Q  FE
Sbjct:   417 TQGSHFMANKRCQLPDGSFRRQRKGYEEVHVPALKPKPFGSEEQLLPVEKLPKYAQAGFE 476

Query:   478 DFKTLNRIQSRLCKSALESDENLLLCAPTGAGKTNVALLCMLQEIGKHINADGTINADEF 537
              FKTLNRIQS+L ++ALE+DENLLLCAPTGAGKTNVAL+CML+EIGKHIN DGTIN D+F
Sbjct:   477 GFKTLNRIQSKLYRAALETDENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDF 536

Query:   538 KIIYVAPMRSLVQEMVGNFGK 558
             KIIY+APMRSLVQEMVG+FGK
Sbjct:   537 KIIYIAPMRSLVQEMVGSFGK 557

 Score = 973 (347.6 bits), Expect = 0., Sum P(5) = 0.
 Identities = 184/213 (86%), Positives = 201/213 (94%)

Query:   815 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 874
             DEIHLLHD+RGPVLEAL+AR IRNIE TQEDVRL+GLSATLPNY+DVAT LR+ P  GLF
Sbjct:   615 DEIHLLHDDRGPVLEALVARAIRNIEMTQEDVRLIGLSATLPNYEDVATFLRVDPAKGLF 674

Query:   875 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQLLVFVHSRKETGKT 934
             YFDNSFRPV LEQ Y+G+TEKKA+KRFQ+MN+IVYEK+MEHAG+NQ+LVFVHSRKETGKT
Sbjct:   675 YFDNSFRPVPLEQTYVGITEKKAIKRFQIMNEIVYEKIMEHAGKNQVLVFVHSRKETGKT 734

Query:   935 ARAIRDMCLEKDTLGQFLREGSASMEVLRTEADQVKNGELRDLLPYGFAIHHAGMTRVDR 994
             ARAIRDMCLEKDTLG FLREGSAS EVLRTEA+Q KN EL+DLLPYGFAIHHAGMTRVDR
Sbjct:   735 ARAIRDMCLEKDTLGLFLREGSASTEVLRTEAEQCKNLELKDLLPYGFAIHHAGMTRVDR 794

Query:   995 TLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
             TLVEDLFAD+HIQVLVSTATLAWGVNLPAHTV+
Sbjct:   795 TLVEDLFADKHIQVLVSTATLAWGVNLPAHTVI 827

 Score = 821 (294.1 bits), Expect = 0., Sum P(5) = 0.
 Identities = 157/224 (70%), Positives = 179/224 (79%)

Query:  1461 EDVDSEAIRLIQACVDVLSSNGWLSPAVAAMEVAQMITQAMWSKDSYLKQLPHFNADIIK 1520
             E++ S+AIRLIQACVDVLSSNGWLSPA+AAME+AQM TQAMWSKDSYLKQLPHF ++ IK
Sbjct:  1913 EEILSKAIRLIQACVDVLSSNGWLSPALAAMELAQMATQAMWSKDSYLKQLPHFTSEHIK 1972

Query:  1521 RCTEKGVETVFDIMXXXXXXXXXXXXXXXXXXADVARFCNRYPNIELSYEVLNKDRIXXX 1580
             RCT+KGVE+VFDIM                  ADVARFCNRYPNIELSYEV++KD I   
Sbjct:  1973 RCTDKGVESVFDIMEMEDEERNALLQLSDSQIADVARFCNRYPNIELSYEVVDKDAIRSG 2032

Query:  1581 XXXXXXXXLDREDEVTGPVIAPFYPQKREEGWWVVIGDPKTNSLLSIKRLTLQQKAKIKL 1640
                     L+RE+EVTGPVIAP +PQKREEGWWVVIGD K+NSL+SIKRLTLQQKAK+KL
Sbjct:  2033 GPVVVLVQLEREEEVTGPVIAPLFPQKREEGWWVVIGDAKSNSLISIKRLTLQQKAKVKL 2092

Query:  1641 DFVAPNPGHHSYALYFMSDAYLGCDQEYKFSIDVSEYYSGGESD 1684
             DFVAP  G H+Y LYFMSDAY+GCDQEYKFS+DV E  +  +SD
Sbjct:  2093 DFVAPATGAHNYTLYFMSDAYMGCDQEYKFSVDVKEAETDSDSD 2136

 Score = 490 (177.5 bits), Expect = 0., Sum P(4) = 0.
 Identities = 131/462 (28%), Positives = 228/462 (49%)

Query:  1027 VDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQ 1086
             ++R LVE LF+   IQV+V++ +L WG+N+ AH VII  TQ YN +   +V+    DVLQ
Sbjct:  1627 LERRLVEQLFSSGAIQVVVASRSLCWGLNVAAHLVIIMDTQYYNGKTHAYVDYPIYDVLQ 1686

Query:  1087 MLGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMISKLPDMLNAEIVLGTVQ 1146
             M+G A RP  D +G  V++   S+  ++   L   LPVES +   + D  NAEIV  T++
Sbjct:  1687 MVGHANRPLQDDEGRCVIMCQGSKKDFFKKFLYEPLPVESHLDHCMHDHFNAEIVTKTIE 1746

Query:  1147 NLKDAVTWLGYTYLYIRMLRAPNLY---GISHDALKEDPLLECHRADLIHTAALHLERSG 1203
             N +DAV +L +T+LY RM + PN Y   GISH  L +      H ++L+      LE+S 
Sbjct:  1747 NKQDAVDYLTWTFLYRRMTQNPNYYNLQGISHRHLSD------HLSELVEQTLSDLEQSK 1800

Query:  1204 LIKYDRKSGHMQVTELGRIASHYYCTHETMATYNQLLKPTLSEIELFRVFSLSGEFRHIT 1263
              I  + +   +    LG IA++YY  + T+  ++  L        L  + S + E+ +I 
Sbjct:  1801 CISVEDEMD-VAPLNLGMIAAYYYINYTTIELFSMSLNAKTKVRGLIEIISNAAEYENIP 1859

Query:  1264 VRXXXXXXXXXXXXRAPIPIKEST-DEPSAKVNILLQAYISQLKLEGFALMSDMVFVTQS 1322
             +R            + P  +     ++P  K N+LLQA++S+++L    L SD   +   
Sbjct:  1860 IRHHEDSLLRQLAQKVPHKLNNPKFNDPHVKTNLLLQAHLSRMQLSA-ELQSDTEEILSK 1918

Query:  1323 AARLMRAIFEIVLYRGWAQLADKALSLCKMVDRRMWQSMSPLRQFRXXXXXXXXXXXXXN 1382
             A RL++A  +++   GW   A  A+ L +M  + MW   S L+Q                
Sbjct:  1919 AIRLIQACVDVLSSNGWLSPALAAMELAQMATQAMWSKDSYLKQLPHFTSEHIKRCTDKG 1978

Query:  1383 FPWERLYDLGPNEIGELIRVPKLGKT----IHKYVHQFPKLELATHIQPITRSTLRV--E 1436
                E ++D+   E  E   + +L  +    + ++ +++P +EL+  +  + +  +R    
Sbjct:  1979 V--ESVFDIMEMEDEERNALLQLSDSQIADVARFCNRYPNIELSYEV--VDKDAIRSGGP 2034

Query:  1437 LTISPDFQWDEKLHGG----------SEGFWILVEDVDSEAI 1468
             + +    + +E++ G            EG+W+++ D  S ++
Sbjct:  2035 VVVLVQLEREEEVTGPVIAPLFPQKREEGWWVVIGDAKSNSL 2076

 Score = 480 (174.0 bits), Expect = 0., Sum P(4) = 0.
 Identities = 88/109 (80%), Positives = 101/109 (92%)

Query:   559 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 618
             DEIHLLHD+RGPVLEAL+AR IRNIE TQEDVRL+GLSATLPNY+DVAT LR+ P  GLF
Sbjct:   615 DEIHLLHDDRGPVLEALVARAIRNIEMTQEDVRLIGLSATLPNYEDVATFLRVDPAKGLF 674

Query:   619 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQLLV 667
             YFDNSFRPV LEQ Y+G+TEKKA+KRFQ+MN+IVYEK+MEHAG+NQ+LV
Sbjct:   675 YFDNSFRPVPLEQTYVGITEKKAIKRFQIMNEIVYEKIMEHAGKNQVLV 723

 Score = 422 (153.6 bits), Expect = 0., Sum P(6) = 0.
 Identities = 73/92 (79%), Positives = 85/92 (92%)

Query:   668 STLRVELTISPDFQWDEKLHGGSEGFWILVEDVDSEVVLHHEYFLLKSRYATDDHVVKFF 727
             STL+VELTI+PDFQWDEK+HG SE FWILVEDVDSEV+LHHEYFLLK++YA D+H++ FF
Sbjct:  1196 STLKVELTITPDFQWDEKVHGSSEAFWILVEDVDSEVILHHEYFLLKAKYAQDEHLITFF 1255

Query:   728 VPVFEPLPPQYFLRIVSDRWIGAETILPVSFR 759
             VPVFEPLPPQYF+R+VSDRW+  ET LPVSFR
Sbjct:  1256 VPVFEPLPPQYFIRVVSDRWLSCETQLPVSFR 1287

 Score = 286 (105.7 bits), Expect = 0., Sum P(6) = 0.
 Identities = 79/227 (34%), Positives = 119/227 (52%)

Query:   802 RSLVQEMVGNFGKDEIHLLHDERGPVLEALIARTIRNIEATQE-DVRLVGLSATLPNYKD 860
             R  VQ  +  F  DE+HL+  E GPVLE + +R +R I +  E  +R+V LS++L N KD
Sbjct:  1442 RKNVQN-INLFVVDEVHLIGGENGPVLEVICSR-MRYISSQIERPIRIVALSSSLSNAKD 1499

Query:   861 VATLLRIKPETGLFYFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQ 920
             VA  L     T  F F  + RPV LE    G        R   M   VY  + +H+ +  
Sbjct:  1500 VAHWLGCSA-TSTFNFHPNVRPVPLELHIQGFNISHTQTRLLSMAKPVYHAITKHSPKKP 1558

Query:   921 LLVFVHSRKETGKTARAIRDMCLEKDTLGQFLREGSASMEVLRTEADQVKNGELRDLLPY 980
             ++VFV SRK+T  TA  I   C       +FL     + + L    +++ +  L++ L  
Sbjct:  1559 VIVFVPSRKQTRLTAIDILTTCAADIQRQRFLH---CTEKDLIPYLEKLSDSTLKETLLN 1615

Query:   981 GFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
             G    H G++ ++R LVE LF+   IQV+V++ +L WG+N+ AH V+
Sbjct:  1616 GVGYLHEGLSPLERRLVEQLFSSGAIQVVVASRSLCWGLNVAAHLVI 1662

 Score = 248 (92.4 bits), Expect = 0., Sum P(5) = 0.
 Identities = 46/54 (85%), Positives = 51/54 (94%)

Query:   761 PRGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNFGK 814
             P GAGKTNVAL+CML+EIGKHIN DGTIN D+FKIIY+APMRSLVQEMVG+FGK
Sbjct:   504 PTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFGK 557

 Score = 149 (57.5 bits), Expect = 1.6e-273, Sum P(3) = 1.6e-273
 Identities = 44/123 (35%), Positives = 62/123 (50%)

Query:   546 RSLVQEMVGNFGKDEIHLLHDERGPVLEALIARTIRNIEATQE-DVRLVGLSATLPNYKD 604
             R  VQ  +  F  DE+HL+  E GPVLE + +R +R I +  E  +R+V LS++L N KD
Sbjct:  1442 RKNVQN-INLFVVDEVHLIGGENGPVLEVICSR-MRYISSQIERPIRIVALSSSLSNAKD 1499

Query:   605 VATLLRIKPETGLFYFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQ 664
             VA  L     T  F F  + RPV LE    G        R   M   VY  + +H+ +  
Sbjct:  1500 VAHWLGCSA-TSTFNFHPNVRPVPLELHIQGFNISHTQTRLLSMAKPVYHAITKHSPKKP 1558

Query:   665 LLV 667
             ++V
Sbjct:  1559 VIV 1561

 Score = 101 (40.6 bits), Expect = 3.2e-309, Sum P(4) = 3.2e-309
 Identities = 42/225 (18%), Positives = 89/225 (39%)

Query:  1454 EGFWILVEDV--DSEAIRLIQACVDVLSSNGWLSPAVAAMEVAQMITQAMWSKDSYLKQL 1511
             EGF ++ + V     A RL++A  +++ + GW       + + +MI + MW     L+Q 
Sbjct:  1073 EGFALMADMVYVTQSAGRLMRAIFEIVLNRGWAQLTDKTLNLCKMIDKRMWQSMCPLRQF 1132

Query:  1512 PHFNADIIKRCTEKGVETVFDIMXXXXXXXXXXXXXXXXXXADVARFCNRYPNIELSYEV 1571
                  +++K+  +K     F+ +                    + ++ + +P +ELS  +
Sbjct:  1133 RKLPEEVVKKIEKKNFP--FERLYDLNHNEIGELIRMPKMGKTIHKYVHLFPKLELSVHL 1190

Query:  1572 LNKDRIXXXXXXXXXXXLDREDEVTGPVIAPFYPQKREEGWWVVIGDPKTNSLLSIKRLT 1631
                 R               +++V G            E +W+++ D  +  +L  +   
Sbjct:  1191 QPITRSTLKVELTITPDFQWDEKVHGS----------SEAFWILVEDVDSEVILHHEYFL 1240

Query:  1632 LQQK-AKIK--LDFVAP--NPGHHSYALYFMSDAYLGCDQEYKFS 1671
             L+ K A+ +  + F  P   P    Y +  +SD +L C+ +   S
Sbjct:  1241 LKAKYAQDEHLITFFVPVFEPLPPQYFIRVVSDRWLSCETQLPVS 1285

 Score = 97 (39.2 bits), Expect = 2.3e-106, Sum P(3) = 2.3e-106
 Identities = 30/107 (28%), Positives = 54/107 (50%)

Query:   453 PKPMGPDETLVPIDKLPRYV--QHAFED-----FKTLNRIQSRLCKSALESDENLLLCAP 505
             P+   P   L+ +  LP       AFE      F   N IQ+++  +   SD+N+ + AP
Sbjct:  1292 PEKYPPPTELLDLQPLPVSALRNSAFESLYQDKFPFFNPIQTQVFNTVYNSDDNVFVGAP 1351

Query:   506 TGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEM 552
             TG+GKT  A   +L+ + +  N++G       + +Y+ PM +L +++
Sbjct:  1352 TGSGKTICAEFAILRMLLQ--NSEG-------RCVYITPMEALAEQV 1389

 Score = 48 (22.0 bits), Expect = 0., Sum P(6) = 0.
 Identities = 13/48 (27%), Positives = 27/48 (56%)

Query:   761 PRGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEM 808
             P G+GKT  A   +L+ + +  N++G       + +Y+ PM +L +++
Sbjct:  1351 PTGSGKTICAEFAILRMLLQ--NSEG-------RCVYITPMEALAEQV 1389

 Score = 44 (20.5 bits), Expect = 2.0e-226, Sum P(3) = 2.0e-226
 Identities = 13/61 (21%), Positives = 27/61 (44%)

Query:   691 EGFWILVEDVDSEVVLHHEYFLLKSRYATDDHVVKFFVPVFEPLPPQYFLRIVSDRWIGA 750
             EG+W+++ D  S  ++  +   L+ +       + F  P        Y L  +SD ++G 
Sbjct:  2062 EGWWVVIGDAKSNSLISIKRLTLQQKAKVK---LDFVAPATGA--HNYTLYFMSDAYMGC 2116

Query:   751 E 751
             +
Sbjct:  2117 D 2117

 Score = 39 (18.8 bits), Expect = 0., Sum P(5) = 0.
 Identities = 7/18 (38%), Positives = 11/18 (61%)

Query:  1513 HFNADIIKRCTEKGVETV 1530
             HFNA+I+ +  E   + V
Sbjct:  1735 HFNAEIVTKTIENKQDAV 1752

 Score = 37 (18.1 bits), Expect = 0., Sum P(5) = 0.
 Identities = 6/13 (46%), Positives = 8/13 (61%)

Query:  1144 TVQNLKDAVTWLG 1156
             ++ N KD   WLG
Sbjct:  1493 SLSNAKDVAHWLG 1505


>ZFIN|ZDB-GENE-081105-64 [details] [associations]
            symbol:si:ch211-251j10.5 "si:ch211-251j10.5"
            species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
            activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00382 SMART:SM00490 ZFIN:ZDB-GENE-081105-64 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
            HOVERGEN:HBG051896 HOGENOM:HOG000157749
            GeneTree:ENSGT00640000091272 KO:K12854 GO:GO:0008026 EMBL:BX640472
            EMBL:CR376723 IPI:IPI00608684 RefSeq:NP_001116729.1
            UniGene:Dr.32574 SMR:B0S754 Ensembl:ENSDART00000109885
            GeneID:799690 KEGG:dre:799690 NextBio:20933935 Uniprot:B0S754
        Length = 2134

 Score = 1803 (639.7 bits), Expect = 0., Sum P(5) = 0.
 Identities = 341/444 (76%), Positives = 381/444 (85%)

Query:  1025 TVVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDV 1084
             T VDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQ+Y+PEKGRW ELGALD+
Sbjct:   787 TRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQVYSPEKGRWTELGALDI 846

Query:  1085 LQMLGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMISKLPDMLNAEIVLGT 1144
             LQMLGRAGRPQYD+KGEG+LIT+H ELQYYLSLLN QLP+ESQM+ KL DMLNAEIVLG 
Sbjct:   847 LQMLGRAGRPQYDSKGEGILITSHGELQYYLSLLNQQLPIESQMVGKLADMLNAEIVLGN 906

Query:  1145 VQNLKDAVTWLGYTYLYIRMLRAPNLYGISHDALKEDPLLECHRADLIHTAALHLERSGL 1204
             VQN KDAV WLGYTYLY+RMLR P LYG+SHD    DPLLE  R DL+HTAA  LE++ L
Sbjct:   907 VQNAKDAVNWLGYTYLYVRMLRNPTLYGVSHDDRSIDPLLERRRMDLVHTAATVLEKNNL 966

Query:  1205 IKYDRKSGHMQVTELGRIASHYYCTHETMATYNQLLKPTLSEIELFRVFSLSGEFRHITV 1264
             +KYD++SG  QVT+LGRIASH+Y THE++ TYNQLLKPTLSEIELFRVFSLS EFR+ITV
Sbjct:   967 VKYDKRSGSFQVTDLGRIASHFYITHESIMTYNQLLKPTLSEIELFRVFSLSSEFRNITV 1026

Query:  1265 RXXXXXXXXXXXXRAPIPIKESTDEPSAKVNILLQAYISQLKLEGFALMSDMVFVTQSAA 1324
             R            R PIP+KES +EPSAK+N+LLQAYISQLKLEGFALM+DMV+VTQSA 
Sbjct:  1027 REEEKLELQKLLERVPIPVKESIEEPSAKINVLLQAYISQLKLEGFALMADMVYVTQSAG 1086

Query:  1325 RLMRAIFEIVLYRGWAQLADKALSLCKMVDRRMWQSMSPLRQFRXXXXXXXXXXXXXNFP 1384
             RLMRAIFEIVL RGWAQL DK L+LCKM+D+RMWQSMSPLRQFR             NFP
Sbjct:  1087 RLMRAIFEIVLSRGWAQLTDKTLNLCKMIDKRMWQSMSPLRQFRKLPEEVIKKIEKKNFP 1146

Query:  1385 WERLYDLGPNEIGELIRVPKLGKTIHKYVHQFPKLELATHIQPITRSTLRVELTISPDFQ 1444
             +ERLYDL  NEIGELIR+PK+GKTIHKYVHQFPKL+LA H+QPITRSTL+VELTI+PDFQ
Sbjct:  1147 FERLYDLNHNEIGELIRMPKMGKTIHKYVHQFPKLDLAVHLQPITRSTLKVELTITPDFQ 1206

Query:  1445 WDEKLHGGSEGFWILVEDVDSEAI 1468
             WD+K+HG SE FWILVEDVDSE +
Sbjct:  1207 WDDKIHGSSEAFWILVEDVDSEVV 1230

 Score = 1686 (598.6 bits), Expect = 0., Sum P(5) = 0.
 Identities = 336/558 (60%), Positives = 413/558 (74%)

Query:     1 MADAAARQLQYEYKANSNLVLQADVRLIERRSRDEATGEVCSLVGKLEGTRMGDRFMRTK 60
             MAD  AR LQYEYKANSNLVLQAD  LI+R  RDE TGEV SLVGKLEGT+MGDR  RTK
Sbjct:     1 MADVTARSLQYEYKANSNLVLQADRSLIDRTRRDEPTGEVLSLVGKLEGTKMGDRSQRTK 60

Query:    61 PIKAEERKVKRQKRDEAQYDFTRMKGATLLSEGVDEMVGIIYRPKTQETRQTYEVLLSFI 120
             P   EER+ KR+KRDE ++D  +MKG TLLSEG+DEMVGI+Y+PKT+ETR+TYE+LLSFI
Sbjct:    61 PQMLEERRAKRRKRDEDRHDINKMKGFTLLSEGIDEMVGIVYKPKTKETRETYEILLSFI 120

Query:   121 QEALGDQPRDILCGAADEVLTVLKNDRMXXXXXXXXTENLLGSLAEERFALLVNLGKKIT 180
             Q ALGDQPRDILCGAADEVL VLKND+M         E LLG   + R+ +LVNLGKKI+
Sbjct:   121 QAALGDQPRDILCGAADEVLAVLKNDKMRDKERRREVEQLLGPTDDTRYHVLVNLGKKIS 180

Query:   181 DFGAEQKSTTAEENIDDTYGINVQFXXXXXXXXXXTFXXXXXXXXXXXXXXXXXXNTAIH 240
             D+G +++    ++NID+TYG+NVQF           +                  ++ + 
Sbjct:   181 DYGGDKELQNMDDNIDETYGVNVQFESDEEEGDEDQYGEVRDEGSDDSEGEEADESSTLT 240

Query:   241 AENLAGGEDAEGTGRKKDKSLHPLDIDAYWLQRRLSKIYDDAMVSQAKAGEVLNILKSAG 300
             A NL    D   T +KKD  LHP DIDA+WLQR+LS+ Y+DA+VSQ KA EVL ILK+A 
Sbjct:   241 A-NLGNTGDVMMT-KKKD--LHPRDIDAFWLQRQLSRFYNDAIVSQKKADEVLEILKTAS 296

Query:   301 DDRDAENQLVLLLGYDCFDFIKMLKKYRQMILYCTLLASSQSESERQKLRDTMSEDPALA 360
             DDR+ ENQLVLLLG++ FDFIK+L+++R+MILYCT+LAS+QSE+E++K+ + M  D  L+
Sbjct:   297 DDRECENQLVLLLGFNTFDFIKVLRQHRRMILYCTMLASAQSEAEKEKIINKMEADQDLS 356

Query:   361 KILRQLDTGKNEDGDANDSADARQSTSIRHQMXXXXXXXXXXXXXTRQVLDLEDLQFSSG 420
             K+L QL   + ED    + +   +    R                +RQ+LDLEDL F+ G
Sbjct:   357 KVLYQLQETEKEDIIREERSRRERMRKSRVDDLESMDIDHGESVSSRQLLDLEDLTFTQG 416

Query:   421 SHFMSNKRCELPDGSFRKQRKGYEEVHVPALKPKPMGPDETLVPIDKLPRYVQHAFEDFK 480
             SHFM+NKRC+LPDGSFRKQRKGYEEVHVPALKPKP G +ETLV I+KLP+Y Q  FE FK
Sbjct:   417 SHFMANKRCQLPDGSFRKQRKGYEEVHVPALKPKPFGDEETLVGIEKLPKYAQAGFEGFK 476

Query:   481 TLNRIQSRLCKSALESDENLLLCAPTGAGKTNVALLCMLQEIGKHINADGTINADEFKII 540
             +LNRIQS+L K+ +E+DENLL+CAPTGAGKTNVAL+ ML+EIGKHIN DGTIN  +FKII
Sbjct:   477 SLNRIQSKLFKTTMETDENLLVCAPTGAGKTNVALMAMLREIGKHINMDGTINVADFKII 536

Query:   541 YVAPMRSLVQEMVGNFGK 558
             Y+APMRSLVQEMVG+FGK
Sbjct:   537 YIAPMRSLVQEMVGSFGK 554

 Score = 978 (349.3 bits), Expect = 0., Sum P(5) = 0.
 Identities = 185/213 (86%), Positives = 202/213 (94%)

Query:   815 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 874
             DEIHLLHD+RGPVLE+LIARTIRN+E TQEDVRL+GLSATLPNY+DVAT LR+ P  GLF
Sbjct:   612 DEIHLLHDDRGPVLESLIARTIRNVELTQEDVRLIGLSATLPNYEDVATCLRVDPSKGLF 671

Query:   875 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQLLVFVHSRKETGKT 934
             YFDNSFRPV LEQ Y+G+TEKKA+KRFQ+MN+IVYEK+MEHAG+NQ+LVFVHSRKETGKT
Sbjct:   672 YFDNSFRPVPLEQTYVGITEKKAIKRFQIMNEIVYEKIMEHAGKNQVLVFVHSRKETGKT 731

Query:   935 ARAIRDMCLEKDTLGQFLREGSASMEVLRTEADQVKNGELRDLLPYGFAIHHAGMTRVDR 994
             ARAIRDMCLEKDTLG FLREGSAS EVLRTEA+Q KN EL+DLLPYGFAIHHAGMTRVDR
Sbjct:   732 ARAIRDMCLEKDTLGLFLREGSASTEVLRTEAEQCKNLELKDLLPYGFAIHHAGMTRVDR 791

Query:   995 TLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
             TLVEDLFADRHIQVLVSTATLAWGVNLPAHTV+
Sbjct:   792 TLVEDLFADRHIQVLVSTATLAWGVNLPAHTVI 824

 Score = 838 (300.0 bits), Expect = 0., Sum P(5) = 0.
 Identities = 158/226 (69%), Positives = 184/226 (81%)

Query:  1461 EDVDSEAIRLIQACVDVLSSNGWLSPAVAAMEVAQMITQAMWSKDSYLKQLPHFNADIIK 1520
             E++ S+A+RLIQACVDVLSSNGWLSPA+AAME+AQM+TQAMWSKDSYL+QLPHF +++IK
Sbjct:  1909 EEILSKAVRLIQACVDVLSSNGWLSPALAAMELAQMVTQAMWSKDSYLRQLPHFTSELIK 1968

Query:  1521 RCTEKGVETVFDIMXXXXXXXXXXXXXXXXXXADVARFCNRYPNIELSYEVLNKDRIXXX 1580
             RCT+KGVE++FDIM                  ADVARFCNRYPNIELSYEV++KD I   
Sbjct:  1969 RCTDKGVESIFDIMEMEDEDRTGLLQLSDVQVADVARFCNRYPNIELSYEVVDKDDIKSG 2028

Query:  1581 XXXXXXXXLDREDEVTGPVIAPFYPQKREEGWWVVIGDPKTNSLLSIKRLTLQQKAKIKL 1640
                     L+RE+EVTGPVIAP +PQKREEGWWVVIGDPK+NSL+SIKRLTLQQKAK+KL
Sbjct:  2029 SPVVVQVQLEREEEVTGPVIAPLFPQKREEGWWVVIGDPKSNSLISIKRLTLQQKAKVKL 2088

Query:  1641 DFVAPNPGHHSYALYFMSDAYLGCDQEYKFSIDVSEYYSGGESDSD 1686
             DFVAP  G H+Y LYFMSDAY+GCDQEYKFS +V E  S G+SDSD
Sbjct:  2089 DFVAPVVGVHNYTLYFMSDAYMGCDQEYKFSTEVKEADSEGDSDSD 2134

 Score = 489 (177.2 bits), Expect = 0., Sum P(4) = 0.
 Identities = 130/461 (28%), Positives = 227/461 (49%)

Query:  1028 DRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQM 1087
             +R +VE LF    IQV+V++ +L WG N+ AH VI+  TQ YN +   +V+    DVLQM
Sbjct:  1624 ERRIVEHLFTSGAIQVVVASRSLCWGTNISAHLVIVMDTQYYNGKIHAYVDYPIYDVLQM 1683

Query:  1088 LGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMISKLPDMLNAEIVLGTVQN 1147
             +G+A RP  D +G  V++   S+  ++   L   LPVES +   L D  NAEIV  TV+N
Sbjct:  1684 VGKANRPLQDDEGRCVIMCQGSKKDFFKKFLYEPLPVESHLDHCLHDHFNAEIVTKTVEN 1743

Query:  1148 LKDAVTWLGYTYLYIRMLRAPNLY---GISHDALKEDPLLECHRADLIHTAALHLERSGL 1204
              +DAV +L +T+LY RM + PN Y   G+SH  L +      H ++L+      LE+S  
Sbjct:  1744 KQDAVDYLTWTFLYRRMTQNPNYYNLQGMSHRHLSD------HLSELVENTLQDLEQSKC 1797

Query:  1205 IKYDRKSGHMQVTELGRIASHYYCTHETMATYNQLLKPTLSEIELFRVFSLSGEFRHITV 1264
             I  + +   +    LG IA++YY  + T+  ++  L        L  + S + E+++I +
Sbjct:  1798 ISIEDEMD-VAPLNLGMIAAYYYINYTTIELFSMSLNAKTKVRGLIEIISNAAEYKNIPI 1856

Query:  1265 RXXXXXXXXXXXXRAPIPIKEST-DEPSAKVNILLQAYISQLKLEGFALMSDMVFVTQSA 1323
             R            + P  +     ++P  K N+LLQA++S+++L    L SD   +   A
Sbjct:  1857 RHHEDTLLRQLAQKVPHKLNNPKFNDPHVKTNLLLQAHLSRMQLSA-ELQSDTEEILSKA 1915

Query:  1324 ARLMRAIFEIVLYRGWAQLADKALSLCKMVDRRMWQSMSPLRQFRXXXXXXXXXXXXXNF 1383
              RL++A  +++   GW   A  A+ L +MV + MW   S LRQ                 
Sbjct:  1916 VRLIQACVDVLSSNGWLSPALAAMELAQMVTQAMWSKDSYLRQLPHFTSELIKRCTDKGV 1975

Query:  1384 PWERLYDLGPNEIGELIRVPKLGKT----IHKYVHQFPKLELATHIQPITRSTLRV--EL 1437
               E ++D+   E  +   + +L       + ++ +++P +EL+  +  + +  ++    +
Sbjct:  1976 --ESIFDIMEMEDEDRTGLLQLSDVQVADVARFCNRYPNIELSYEV--VDKDDIKSGSPV 2031

Query:  1438 TISPDFQWDEKLHGG----------SEGFWILVEDVDSEAI 1468
              +    + +E++ G            EG+W+++ D  S ++
Sbjct:  2032 VVQVQLEREEEVTGPVIAPLFPQKREEGWWVVIGDPKSNSL 2072

 Score = 482 (174.7 bits), Expect = 0., Sum P(4) = 0.
 Identities = 88/109 (80%), Positives = 102/109 (93%)

Query:   559 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 618
             DEIHLLHD+RGPVLE+LIARTIRN+E TQEDVRL+GLSATLPNY+DVAT LR+ P  GLF
Sbjct:   612 DEIHLLHDDRGPVLESLIARTIRNVELTQEDVRLIGLSATLPNYEDVATCLRVDPSKGLF 671

Query:   619 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQLLV 667
             YFDNSFRPV LEQ Y+G+TEKKA+KRFQ+MN+IVYEK+MEHAG+NQ+LV
Sbjct:   672 YFDNSFRPVPLEQTYVGITEKKAIKRFQIMNEIVYEKIMEHAGKNQVLV 720

 Score = 419 (152.6 bits), Expect = 0., Sum P(6) = 0.
 Identities = 74/92 (80%), Positives = 84/92 (91%)

Query:   668 STLRVELTISPDFQWDEKLHGGSEGFWILVEDVDSEVVLHHEYFLLKSRYATDDHVVKFF 727
             STL+VELTI+PDFQWD+K+HG SE FWILVEDVDSEVVLHHEYFLLK++YA D+H+V FF
Sbjct:  1193 STLKVELTITPDFQWDDKIHGSSEAFWILVEDVDSEVVLHHEYFLLKAKYAQDEHLVTFF 1252

Query:   728 VPVFEPLPPQYFLRIVSDRWIGAETILPVSFR 759
             VPVFEPLPPQYF+RI SDRW+  ET LPVSFR
Sbjct:  1253 VPVFEPLPPQYFIRIASDRWLSCETQLPVSFR 1284

 Score = 280 (103.6 bits), Expect = 0., Sum P(6) = 0.
 Identities = 79/227 (34%), Positives = 111/227 (48%)

Query:   802 RSLVQEMVGNFGKDEIHLLHDERGPVLEALIARTIRNIEATQE-DVRLVGLSATLPNYKD 860
             R  VQ  V  F  DE+HL+  + GPVLE + +R +R I +  E  +R+V LS++L N KD
Sbjct:  1438 RKNVQN-VSLFIIDEVHLIGGDNGPVLEVICSR-MRYISSQIERPIRIVALSSSLSNAKD 1495

Query:   861 VATLLRIKPETGLFYFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQ 920
             VA  L     T  F F  + RPV LE    G        R   M   VY  +M+H+    
Sbjct:  1496 VAHWLGCST-TATFNFHPNVRPVPLELHIQGFNVSHTQTRLLSMAKPVYHAIMKHSPSKP 1554

Query:   921 LLVFVHSRKETGKTARAIRDMCLEKDTLGQFLREGSASMEVLRTEADQVKNGELRDLLPY 980
             +LVFV SR++T  TA  I   C       +FL      +         V    L++ L  
Sbjct:  1555 VLVFVPSRRQTRLTAIDILTFCAADVVPQRFLHSTEKDLVPFMENLSDVT---LKETLSN 1611

Query:   981 GFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
             G    H G++  +R +VE LF    IQV+V++ +L WG N+ AH V+
Sbjct:  1612 GVGYLHEGLSPTERRIVEHLFTSGAIQVVVASRSLCWGTNISAHLVI 1658

 Score = 231 (86.4 bits), Expect = 0., Sum P(5) = 0.
 Identities = 44/54 (81%), Positives = 49/54 (90%)

Query:   761 PRGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNFGK 814
             P GAGKTNVAL+ ML+EIGKHIN DGTIN  +FKIIY+APMRSLVQEMVG+FGK
Sbjct:   501 PTGAGKTNVALMAMLREIGKHINMDGTINVADFKIIYIAPMRSLVQEMVGSFGK 554

 Score = 151 (58.2 bits), Expect = 6.0e-274, Sum P(3) = 6.0e-274
 Identities = 46/123 (37%), Positives = 62/123 (50%)

Query:   546 RSLVQEMVGNFGKDEIHLLHDERGPVLEALIARTIRNIEATQE-DVRLVGLSATLPNYKD 604
             R  VQ  V  F  DE+HL+  + GPVLE + +R +R I +  E  +R+V LS++L N KD
Sbjct:  1438 RKNVQN-VSLFIIDEVHLIGGDNGPVLEVICSR-MRYISSQIERPIRIVALSSSLSNAKD 1495

Query:   605 VATLLRIKPETGLFYFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQ 664
             VA  L     T  F F  + RPV LE    G        R   M   VY  +M+H+    
Sbjct:  1496 VAHWLGCST-TATFNFHPNVRPVPLELHIQGFNVSHTQTRLLSMAKPVYHAIMKHSPSKP 1554

Query:   665 LLV 667
             +LV
Sbjct:  1555 VLV 1557

 Score = 109 (43.4 bits), Expect = 3.2e-307, Sum P(4) = 3.2e-307
 Identities = 60/291 (20%), Positives = 115/291 (39%)

Query:  1394 NEIGELIRVPKLGKTIHKY-VHQFPKLELATHIQ----PITRSTLRVELTISPDFQ-WDE 1447
             +EI EL RV  L        V +  KLEL   ++    P+  S       I+   Q +  
Sbjct:  1007 SEI-ELFRVFSLSSEFRNITVREEEKLELQKLLERVPIPVKESIEEPSAKINVLLQAYIS 1065

Query:  1448 KLHGGSEGFWILVEDV--DSEAIRLIQACVDVLSSNGWLSPAVAAMEVAQMITQAMWSKD 1505
             +L    EGF ++ + V     A RL++A  +++ S GW       + + +MI + MW   
Sbjct:  1066 QLK--LEGFALMADMVYVTQSAGRLMRAIFEIVLSRGWAQLTDKTLNLCKMIDKRMWQSM 1123

Query:  1506 SYLKQLPHFNADIIKRCTEKGVETVFDIMXXXXXXXXXXXXXXXXXXADVARFCNRYPNI 1565
             S L+Q      ++IK+  +K     F+ +                    + ++ +++P +
Sbjct:  1124 SPLRQFRKLPEEVIKKIEKKNFP--FERLYDLNHNEIGELIRMPKMGKTIHKYVHQFPKL 1181

Query:  1566 ELSYEVLNKDRIXXXXXXXXXXXLDREDEVTGPVIAPFYPQKREEGWWVVIGDPKTNSLL 1625
             +L+  +    R               +D++ G            E +W+++ D  +  +L
Sbjct:  1182 DLAVHLQPITRSTLKVELTITPDFQWDDKIHGS----------SEAFWILVEDVDSEVVL 1231

Query:  1626 SIKRLTLQQK-AKIK--LDFVAP--NPGHHSYALYFMSDAYLGCDQEYKFS 1671
               +   L+ K A+ +  + F  P   P    Y +   SD +L C+ +   S
Sbjct:  1232 HHEYFLLKAKYAQDEHLVTFFVPVFEPLPPQYFIRIASDRWLSCETQLPVS 1282

 Score = 104 (41.7 bits), Expect = 2.4e-108, Sum P(3) = 2.4e-108
 Identities = 32/106 (30%), Positives = 55/106 (51%)

Query:   453 PKPMGPDETLVPIDKLPRYVQH--AFE----DFKTLNRIQSRLCKSALESDENLLLCAPT 506
             P+   P   L+ +  LP       AFE    +F   N IQ+++  +   SD+N+ + APT
Sbjct:  1289 PEKYPPPTELLDLQPLPVSALRNGAFESLYQNFPFFNPIQTQVFNAVYNSDDNVFVGAPT 1348

Query:   507 GAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEM 552
             G+GKT  A   +L+ +  H NA+G       + +Y+ PM +L +++
Sbjct:  1349 GSGKTICAEFAILRML-LH-NAEG-------RCVYITPMEALAEQV 1385

 Score = 53 (23.7 bits), Expect = 0., Sum P(6) = 0.
 Identities = 15/48 (31%), Positives = 27/48 (56%)

Query:   761 PRGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEM 808
             P G+GKT  A   +L+ +  H NA+G       + +Y+ PM +L +++
Sbjct:  1347 PTGSGKTICAEFAILRML-LH-NAEG-------RCVYITPMEALAEQV 1385

 Score = 46 (21.3 bits), Expect = 2.9e-225, Sum P(3) = 2.9e-225
 Identities = 14/61 (22%), Positives = 28/61 (45%)

Query:   691 EGFWILVEDVDSEVVLHHEYFLLKSRYATDDHVVKFFVPVFEPLPPQYFLRIVSDRWIGA 750
             EG+W+++ D  S  ++  +   L+ +       + F  PV       Y L  +SD ++G 
Sbjct:  2058 EGWWVVIGDPKSNSLISIKRLTLQQKAKVK---LDFVAPVVGV--HNYTLYFMSDAYMGC 2112

Query:   751 E 751
             +
Sbjct:  2113 D 2113

 Score = 40 (19.1 bits), Expect = 0., Sum P(5) = 0.
 Identities = 7/18 (38%), Positives = 11/18 (61%)

Query:  1513 HFNADIIKRCTEKGVETV 1530
             HFNA+I+ +  E   + V
Sbjct:  1731 HFNAEIVTKTVENKQDAV 1748

 Score = 37 (18.1 bits), Expect = 0., Sum P(5) = 0.
 Identities = 6/13 (46%), Positives = 8/13 (61%)

Query:  1144 TVQNLKDAVTWLG 1156
             ++ N KD   WLG
Sbjct:  1489 SLSNAKDVAHWLG 1501


>UNIPROTKB|F1LNJ2 [details] [associations]
            symbol:Ascc3l1 "Protein Ascc3l1" species:10116 "Rattus
            norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005682 "U5 snRNP"
            evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
            "catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR001650
            InterPro:IPR003593 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00382 SMART:SM00490 GO:GO:0005524
            GO:GO:0008380 GO:GO:0005682 GO:GO:0003676 GO:GO:0071013
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179
            Pfam:PF02889 SMART:SM00611 SMART:SM00973
            GeneTree:ENSGT00640000091272 OMA:KWDVLSR GO:GO:0008026
            IPI:IPI00562876 PRIDE:F1LNJ2 Ensembl:ENSRNOT00000043895
            ArrayExpress:F1LNJ2 Uniprot:F1LNJ2
        Length = 2139

 Score = 1802 (639.4 bits), Expect = 0., Sum P(5) = 0.
 Identities = 344/447 (76%), Positives = 385/447 (86%)

Query:  1025 TVVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDV 1084
             T VDRTLVEDLFAD+HIQVLVSTATLAWGVNLPAHTVIIKGTQ+Y+PEKGRW ELGALD+
Sbjct:   790 TRVDRTLVEDLFADKHIQVLVSTATLAWGVNLPAHTVIIKGTQVYSPEKGRWTELGALDI 849

Query:  1085 LQMLGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMISKLPDMLNAEIVLGT 1144
             LQMLGRAGRPQYDTKGEG+LIT+H ELQYYLSLLN QLP+ESQM+SKLPDMLNAEIVLG 
Sbjct:   850 LQMLGRAGRPQYDTKGEGILITSHGELQYYLSLLNQQLPIESQMVSKLPDMLNAEIVLGN 909

Query:  1145 VQNLKDAVTWLGYTYLYIRMLRAPNLYGISHDALKEDPLLECHRADLIHTAALHLERSGL 1204
             VQN KDAV WLGY YLYIRMLR+P LYGISHD LK DPLL+  R DL+HTAAL L+++ L
Sbjct:   910 VQNAKDAVNWLGYAYLYIRMLRSPTLYGISHDDLKGDPLLDQRRLDLVHTAALMLDKNNL 969

Query:  1205 IKYDRKSGHMQVTELGRIASHYYCTHETMATYNQLLKPTLSEIELFRVFSLSGEFRHITV 1264
             +KYD+K+G+ QVTELGRIASHYY T++T+ TYNQLLKPTLSEIELFRVFSLS EF++ITV
Sbjct:   970 VKYDKKTGNFQVTELGRIASHYYITNDTVQTYNQLLKPTLSEIELFRVFSLSSEFKNITV 1029

Query:  1265 RXXXXXXXXXXXXRAPIPIKESTDEPSAKVNILLQAYISQLKLEGFALMSDMVFVTQSAA 1324
             R            R PIP+KES +EPSAK+N+LLQA+ISQLKLEGFALM+DMV+VTQSA 
Sbjct:  1030 REEEKLELQKLLERVPIPVKESIEEPSAKINVLLQAFISQLKLEGFALMADMVYVTQSAG 1089

Query:  1325 RLMRAIFEIVLYRGWAQLADKALSLCKMVDRRMWQSMSPLRQFRXXXXXXXXXXXXXNFP 1384
             RLMRAIFEIVL RGWAQL DK L+LCKM+D+RMWQSM PLRQFR             NFP
Sbjct:  1090 RLMRAIFEIVLNRGWAQLTDKTLNLCKMIDKRMWQSMCPLRQFRKLPEEVVKKIEKKNFP 1149

Query:  1385 WERLYDLGPNEIGELIRVPKLGKTIHKYVHQFPKLELATHIQPITRSTLRVELTISPDFQ 1444
             +ERLYDL  NEIGELIR+PK+GKTIHKYVH FPKLEL+ H+QPITRSTL+VELTI+PDFQ
Sbjct:  1150 FERLYDLNHNEIGELIRMPKMGKTIHKYVHLFPKLELSVHLQPITRSTLKVELTITPDFQ 1209

Query:  1445 WDEK---LHGGSEGFWILVEDVDSEAI 1468
             WDEK   +HG SE FWILVEDVDSE I
Sbjct:  1210 WDEKARLVHGSSEAFWILVEDVDSEVI 1236

 Score = 1701 (603.8 bits), Expect = 0., Sum P(5) = 0.
 Identities = 340/561 (60%), Positives = 414/561 (73%)

Query:     1 MADAAARQLQYEYKANSNLVLQADVRLIERRSRDEATGEVCSLVGKLEGTRMGDRFMRTK 60
             MAD  AR LQYEYKANSNLVLQAD  LI+R  RDE TGEV SLVGKLEGTRMGD+  RTK
Sbjct:     1 MADVTARSLQYEYKANSNLVLQADRSLIDRTRRDEPTGEVLSLVGKLEGTRMGDKAQRTK 60

Query:    61 PIKAEERKVKRQKRDEAQYDFTRMKGATLLSEGVDEMVGIIYRPKTQETRQTYEVLLSFI 120
             P   EER+ KR+KRDE ++D  +MKG TLLSEG+DEMVGIIY+PKT+ETR+TYEVLLSFI
Sbjct:    61 PQMQEERRAKRRKRDEDRHDINKMKGYTLLSEGIDEMVGIIYKPKTKETRETYEVLLSFI 120

Query:   121 QEALGDQPRDILCGAADEVLTVLKNDRMXXXXXXXXTENLLGSLAEERFALLVNLGKKIT 180
             Q ALGDQPRDILCGAADEVL VLKN+++         + LLG   + R+ +LVNLGKKIT
Sbjct:   121 QAALGDQPRDILCGAADEVLAVLKNEKLRDKERRREIDLLLGQTDDTRYHVLVNLGKKIT 180

Query:   181 DFGAEQKSTTAEENIDDTYGINVQFXXXXXXXXXXTFXXXXXXXXXXXXXXXXXXNTAIH 240
             D+G +++    ++NID+TYG+NVQF           +                       
Sbjct:   181 DYGGDKEIQNMDDNIDETYGVNVQFESDEEEGDEDVYGEVREEASDDDMEGDEAVVRCTL 240

Query:   241 AENL-AGGEDAEGTGRKKDKSLHPLDIDAYWLQRRLSKIYDDAMVSQAKAGEVLNILKSA 299
             + NL A GE    + +KKD  LHP DIDA+WLQR+LS+ YDDA+VSQ KA EVL ILK+A
Sbjct:   241 SANLVASGELM--SSKKKD--LHPRDIDAFWLQRQLSRFYDDAIVSQKKADEVLEILKTA 296

Query:   300 GDDRDAENQLVLLLGYDCFDFIKMLKKYRQMILYCTLLASSQSESERQKLRDTMSEDPAL 359
              DDR+ ENQLVLLLG++ FDFIK+L+++R MILYCTLLAS+QSE+E++++   M  DP L
Sbjct:   297 SDDRECENQLVLLLGFNTFDFIKVLRQHRMMILYCTLLASAQSEAEKERIMGKMEADPEL 356

Query:   360 AKILRQLDTGKNED--GDANDSADARQSTSIRHQMXXXXXXXXXXXXXTRQVLDLEDLQF 417
             +K L QL   + ED   +     +  + + +   +              RQVLDLEDL F
Sbjct:   357 SKFLYQLHETEKEDLIREERSRRERVRQSRMDTDLETMDLDQGGEALAPRQVLDLEDLVF 416

Query:   418 SSGSHFMSNKRCELPDGSFRKQRKGYEEVHVPALKPKPMGPDETLVPIDKLPRYVQHAFE 477
             + GSHFM+NKRC+LPDGSFR+QRKGYEEVHVPALKPKP G +E L+P++KLP+Y Q  FE
Sbjct:   417 TQGSHFMANKRCQLPDGSFRRQRKGYEEVHVPALKPKPFGSEEQLLPVEKLPKYAQAGFE 476

Query:   478 DFKTLNRIQSRLCKSALESDENLLLCAPTGAGKTNVALLCMLQEIGKHINADGTINADEF 537
              FKTLNRIQS+L ++ALE+DENLLLCAPTGAGKTNVAL+CML+EIGKHIN DGTIN D+F
Sbjct:   477 GFKTLNRIQSKLYRAALETDENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDF 536

Query:   538 KIIYVAPMRSLVQEMVGNFGK 558
             KIIY+APMRSLVQEMVG+FGK
Sbjct:   537 KIIYIAPMRSLVQEMVGSFGK 557

 Score = 973 (347.6 bits), Expect = 0., Sum P(5) = 0.
 Identities = 184/213 (86%), Positives = 201/213 (94%)

Query:   815 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 874
             DEIHLLHD+RGPVLEAL+AR IRNIE TQEDVRL+GLSATLPNY+DVAT LR+ P  GLF
Sbjct:   615 DEIHLLHDDRGPVLEALVARAIRNIEMTQEDVRLIGLSATLPNYEDVATFLRVDPAKGLF 674

Query:   875 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQLLVFVHSRKETGKT 934
             YFDNSFRPV LEQ Y+G+TEKKA+KRFQ+MN+IVYEK+MEHAG+NQ+LVFVHSRKETGKT
Sbjct:   675 YFDNSFRPVPLEQTYVGITEKKAIKRFQIMNEIVYEKIMEHAGKNQVLVFVHSRKETGKT 734

Query:   935 ARAIRDMCLEKDTLGQFLREGSASMEVLRTEADQVKNGELRDLLPYGFAIHHAGMTRVDR 994
             ARAIRDMCLEKDTLG FLREGSAS EVLRTEA+Q KN EL+DLLPYGFAIHHAGMTRVDR
Sbjct:   735 ARAIRDMCLEKDTLGLFLREGSASTEVLRTEAEQCKNLELKDLLPYGFAIHHAGMTRVDR 794

Query:   995 TLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
             TLVEDLFAD+HIQVLVSTATLAWGVNLPAHTV+
Sbjct:   795 TLVEDLFADKHIQVLVSTATLAWGVNLPAHTVI 827

 Score = 825 (295.5 bits), Expect = 0., Sum P(5) = 0.
 Identities = 157/224 (70%), Positives = 180/224 (80%)

Query:  1461 EDVDSEAIRLIQACVDVLSSNGWLSPAVAAMEVAQMITQAMWSKDSYLKQLPHFNADIIK 1520
             E++ S+AIRLIQACVDVLSSNGWLSPA+AAME+AQM+TQAMWSKDSYLKQLPHF ++ IK
Sbjct:  1916 EEILSKAIRLIQACVDVLSSNGWLSPALAAMELAQMVTQAMWSKDSYLKQLPHFTSEHIK 1975

Query:  1521 RCTEKGVETVFDIMXXXXXXXXXXXXXXXXXXADVARFCNRYPNIELSYEVLNKDRIXXX 1580
             RCT+KGVE+VFDIM                  ADVARFCNRYPNIELSYEV++KD I   
Sbjct:  1976 RCTDKGVESVFDIMEMEDEERNALLQLTDSQIADVARFCNRYPNIELSYEVVDKDSIRSG 2035

Query:  1581 XXXXXXXXLDREDEVTGPVIAPFYPQKREEGWWVVIGDPKTNSLLSIKRLTLQQKAKIKL 1640
                     L+RE+EVTGPVIAP +PQKREEGWWVVIGD K+NSL+SIKRLTLQQKAK+KL
Sbjct:  2036 GPVVVLVQLEREEEVTGPVIAPLFPQKREEGWWVVIGDAKSNSLISIKRLTLQQKAKVKL 2095

Query:  1641 DFVAPNPGHHSYALYFMSDAYLGCDQEYKFSIDVSEYYSGGESD 1684
             DFVAP  G H+Y LYFMSDAY+GCDQEYKFS+DV E  +  +SD
Sbjct:  2096 DFVAPATGGHNYTLYFMSDAYMGCDQEYKFSVDVKEAETDSDSD 2139

 Score = 490 (177.5 bits), Expect = 0., Sum P(4) = 0.
 Identities = 132/462 (28%), Positives = 230/462 (49%)

Query:  1027 VDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQ 1086
             ++R LVE LF+   IQV+V++ +L WG+N+ AH VII  TQ YN +   +V+    DVLQ
Sbjct:  1630 MERRLVEQLFSSGAIQVVVASRSLCWGMNVAAHLVIIMDTQYYNGKIHAYVDYPIYDVLQ 1689

Query:  1087 MLGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMISKLPDMLNAEIVLGTVQ 1146
             M+G A RP  D +G  V++   S+  ++   L   LPVES +   + D  NAEIV  T++
Sbjct:  1690 MVGHANRPLQDDEGRCVIMCQGSKKDFFKKFLYEPLPVESHLDHCMHDHFNAEIVTKTIE 1749

Query:  1147 NLKDAVTWLGYTYLYIRMLRAPNLY---GISHDALKEDPLLECHRADLIHTAALHLERSG 1203
             N +DAV +L +T+LY RM + PN Y   GISH  L +      H ++L+      LE+S 
Sbjct:  1750 NKQDAVDYLTWTFLYRRMTQNPNYYNLQGISHRHLSD------HLSELVEQTLSDLEQSK 1803

Query:  1204 LIKYDRKSGHMQVTELGRIASHYYCTHETMATYNQLLKPTLSEIELFRVFSLSGEFRHIT 1263
              I  + +   +    LG IA++YY  + T+  ++  L        L  + S + E+ +I 
Sbjct:  1804 CISIEDEMD-VAPLNLGMIAAYYYINYTTIELFSMSLNAKTKVRGLIEIISNAAEYENIP 1862

Query:  1264 VRXXXXXXXXXXXXRAPIPIKEST-DEPSAKVNILLQAYISQLKLEGFALMSDMVFVTQS 1322
             +R            + P  +     ++P  K N+LLQA++S+++L    L SD   +   
Sbjct:  1863 IRHHEDNLLRQLAQKVPHKLNNPKFNDPHVKTNLLLQAHLSRMQLSA-ELQSDTEEILSK 1921

Query:  1323 AARLMRAIFEIVLYRGWAQLADKALSLCKMVDRRMWQSMSPLRQFRXXXXXXXXXXXXXN 1382
             A RL++A  +++   GW   A  A+ L +MV + MW   S L+Q                
Sbjct:  1922 AIRLIQACVDVLSSNGWLSPALAAMELAQMVTQAMWSKDSYLKQLPHFTSEHIKRCTDKG 1981

Query:  1383 FPWERLYDLGPNEIGELIRVPKLGKT----IHKYVHQFPKLELATHIQPITRSTLRV--E 1436
                E ++D+   E  E   + +L  +    + ++ +++P +EL+  +  + + ++R    
Sbjct:  1982 V--ESVFDIMEMEDEERNALLQLTDSQIADVARFCNRYPNIELSYEV--VDKDSIRSGGP 2037

Query:  1437 LTISPDFQWDEKLHGG----------SEGFWILVEDVDSEAI 1468
             + +    + +E++ G            EG+W+++ D  S ++
Sbjct:  2038 VVVLVQLEREEEVTGPVIAPLFPQKREEGWWVVIGDAKSNSL 2079

 Score = 480 (174.0 bits), Expect = 0., Sum P(4) = 0.
 Identities = 88/109 (80%), Positives = 101/109 (92%)

Query:   559 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 618
             DEIHLLHD+RGPVLEAL+AR IRNIE TQEDVRL+GLSATLPNY+DVAT LR+ P  GLF
Sbjct:   615 DEIHLLHDDRGPVLEALVARAIRNIEMTQEDVRLIGLSATLPNYEDVATFLRVDPAKGLF 674

Query:   619 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQLLV 667
             YFDNSFRPV LEQ Y+G+TEKKA+KRFQ+MN+IVYEK+MEHAG+NQ+LV
Sbjct:   675 YFDNSFRPVPLEQTYVGITEKKAIKRFQIMNEIVYEKIMEHAGKNQVLV 723

 Score = 409 (149.0 bits), Expect = 0., Sum P(6) = 0.
 Identities = 73/95 (76%), Positives = 85/95 (89%)

Query:   668 STLRVELTISPDFQWDEK---LHGGSEGFWILVEDVDSEVVLHHEYFLLKSRYATDDHVV 724
             STL+VELTI+PDFQWDEK   +HG SE FWILVEDVDSEV+LHHEYFLLK++YA D+H++
Sbjct:  1196 STLKVELTITPDFQWDEKARLVHGSSEAFWILVEDVDSEVILHHEYFLLKAKYAQDEHLI 1255

Query:   725 KFFVPVFEPLPPQYFLRIVSDRWIGAETILPVSFR 759
              FFVPVFEPLPPQYF+R+VSDRW+  ET LPVSFR
Sbjct:  1256 TFFVPVFEPLPPQYFIRVVSDRWLSCETQLPVSFR 1290

 Score = 286 (105.7 bits), Expect = 0., Sum P(6) = 0.
 Identities = 79/227 (34%), Positives = 119/227 (52%)

Query:   802 RSLVQEMVGNFGKDEIHLLHDERGPVLEALIARTIRNIEATQE-DVRLVGLSATLPNYKD 860
             R  VQ  +  F  DE+HL+  E GPVLE + +R +R I +  E  +R+V LS++L N KD
Sbjct:  1445 RKNVQN-INLFVVDEVHLIGGENGPVLEVICSR-MRYISSQIERPIRIVALSSSLSNAKD 1502

Query:   861 VATLLRIKPETGLFYFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQ 920
             VA  L     T  F F  + RPV LE    G        R   M   VY  + +H+ +  
Sbjct:  1503 VAHWLGCSA-TSTFNFHPNVRPVPLELHIQGFNISHTQTRLLSMAKPVYHAITKHSPKKP 1561

Query:   921 LLVFVHSRKETGKTARAIRDMCLEKDTLGQFLREGSASMEVLRTEADQVKNGELRDLLPY 980
             ++VFV SRK+T  TA  I   C       +FL     + + L    +++ +  L++ L  
Sbjct:  1562 VIVFVPSRKQTRLTAIDILTTCAADIQRQRFLH---CTEKDLIPYLEKLSDSTLKETLLN 1618

Query:   981 GFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
             G    H G++ ++R LVE LF+   IQV+V++ +L WG+N+ AH V+
Sbjct:  1619 GVGYLHEGLSPMERRLVEQLFSSGAIQVVVASRSLCWGMNVAAHLVI 1665

 Score = 248 (92.4 bits), Expect = 0., Sum P(5) = 0.
 Identities = 46/54 (85%), Positives = 51/54 (94%)

Query:   761 PRGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNFGK 814
             P GAGKTNVAL+CML+EIGKHIN DGTIN D+FKIIY+APMRSLVQEMVG+FGK
Sbjct:   504 PTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFGK 557

 Score = 149 (57.5 bits), Expect = 6.0e-274, Sum P(3) = 6.0e-274
 Identities = 44/123 (35%), Positives = 62/123 (50%)

Query:   546 RSLVQEMVGNFGKDEIHLLHDERGPVLEALIARTIRNIEATQE-DVRLVGLSATLPNYKD 604
             R  VQ  +  F  DE+HL+  E GPVLE + +R +R I +  E  +R+V LS++L N KD
Sbjct:  1445 RKNVQN-INLFVVDEVHLIGGENGPVLEVICSR-MRYISSQIERPIRIVALSSSLSNAKD 1502

Query:   605 VATLLRIKPETGLFYFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQ 664
             VA  L     T  F F  + RPV LE    G        R   M   VY  + +H+ +  
Sbjct:  1503 VAHWLGCSA-TSTFNFHPNVRPVPLELHIQGFNISHTQTRLLSMAKPVYHAITKHSPKKP 1561

Query:   665 LLV 667
             ++V
Sbjct:  1562 VIV 1564

 Score = 97 (39.2 bits), Expect = 8.4e-107, Sum P(3) = 8.4e-107
 Identities = 30/107 (28%), Positives = 54/107 (50%)

Query:   453 PKPMGPDETLVPIDKLPRYV--QHAFED-----FKTLNRIQSRLCKSALESDENLLLCAP 505
             P+   P   L+ +  LP       AFE      F   N IQ+++  +   SD+N+ + AP
Sbjct:  1295 PEKYPPPTELLDLQPLPVSALRNSAFESLYQDKFPFFNPIQTQVFNTVYNSDDNVFVGAP 1354

Query:   506 TGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEM 552
             TG+GKT  A   +L+ + +  N++G       + +Y+ PM +L +++
Sbjct:  1355 TGSGKTICAEFAILRMLLQ--NSEG-------RCVYITPMEALAEQV 1392

 Score = 94 (38.1 bits), Expect = 1.7e-308, Sum P(4) = 1.7e-308
 Identities = 43/225 (19%), Positives = 88/225 (39%)

Query:  1454 EGFWILVEDV--DSEAIRLIQACVDVLSSNGWLSPAVAAMEVAQMITQAMWSKDSYLKQL 1511
             EGF ++ + V     A RL++A  +++ + GW       + + +MI + MW     L+Q 
Sbjct:  1073 EGFALMADMVYVTQSAGRLMRAIFEIVLNRGWAQLTDKTLNLCKMIDKRMWQSMCPLRQF 1132

Query:  1512 PHFNADIIKRCTEKGVETVFDIMXXXXXXXXXXXXXXXXXXADVARFCNRYPNIELSYEV 1571
                  +++K+  +K     F+ +                    + ++ + +P +ELS  +
Sbjct:  1133 RKLPEEVVKKIEKKNFP--FERLYDLNHNEIGELIRMPKMGKTIHKYVHLFPKLELSVHL 1190

Query:  1572 LNKDRIXXXXXXXXXXXLDREDEVTGPVIAPFYPQKREEGWWVVIGDPKTNSLLSIKRLT 1631
                 R              + DE    V          E +W+++ D  +  +L  +   
Sbjct:  1191 QPITRSTLKVELTITPDF-QWDEKARLV------HGSSEAFWILVEDVDSEVILHHEYFL 1243

Query:  1632 LQQK-AKIK--LDFVAP--NPGHHSYALYFMSDAYLGCDQEYKFS 1671
             L+ K A+ +  + F  P   P    Y +  +SD +L C+ +   S
Sbjct:  1244 LKAKYAQDEHLITFFVPVFEPLPPQYFIRVVSDRWLSCETQLPVS 1288

 Score = 48 (22.0 bits), Expect = 0., Sum P(6) = 0.
 Identities = 13/48 (27%), Positives = 27/48 (56%)

Query:   761 PRGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEM 808
             P G+GKT  A   +L+ + +  N++G       + +Y+ PM +L +++
Sbjct:  1354 PTGSGKTICAEFAILRMLLQ--NSEG-------RCVYITPMEALAEQV 1392

 Score = 43 (20.2 bits), Expect = 2.6e-226, Sum P(3) = 2.6e-226
 Identities = 13/61 (21%), Positives = 27/61 (44%)

Query:   691 EGFWILVEDVDSEVVLHHEYFLLKSRYATDDHVVKFFVPVFEPLPPQYFLRIVSDRWIGA 750
             EG+W+++ D  S  ++  +   L+ +       + F  P        Y L  +SD ++G 
Sbjct:  2065 EGWWVVIGDAKSNSLISIKRLTLQQKAKVK---LDFVAPATGG--HNYTLYFMSDAYMGC 2119

Query:   751 E 751
             +
Sbjct:  2120 D 2120

 Score = 39 (18.8 bits), Expect = 0., Sum P(5) = 0.
 Identities = 7/18 (38%), Positives = 11/18 (61%)

Query:  1513 HFNADIIKRCTEKGVETV 1530
             HFNA+I+ +  E   + V
Sbjct:  1738 HFNAEIVTKTIENKQDAV 1755

 Score = 37 (18.1 bits), Expect = 0., Sum P(5) = 0.
 Identities = 6/13 (46%), Positives = 8/13 (61%)

Query:  1144 TVQNLKDAVTWLG 1156
             ++ N KD   WLG
Sbjct:  1496 SLSNAKDVAHWLG 1508


>UNIPROTKB|F1SU44 [details] [associations]
            symbol:F1SU44 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889
            GeneTree:ENSGT00640000091272 GO:GO:0008026 EMBL:CU896688
            Ensembl:ENSSSCT00000008903 OMA:NETIATY Uniprot:F1SU44
        Length = 1027

 Score = 1695 (601.7 bits), Expect = 0., Sum P(4) = 0.
 Identities = 339/561 (60%), Positives = 413/561 (73%)

Query:     1 MADAAARQLQYEYKANSNLVLQADVRLIERRSRDEATGEVCSLVGKLEGTRMGDRFMRTK 60
             MAD  AR LQYEYKANSNLVLQAD  LI+R  RDE TGEV SLVGKLEGTRMGD+  RTK
Sbjct:     1 MADVTARSLQYEYKANSNLVLQADRSLIDRTRRDEPTGEVLSLVGKLEGTRMGDKAQRTK 60

Query:    61 PIKAEERKVKRQKRDEAQYDFTRMKGATLLSEGVDEMVGIIYRPKTQETRQTYEVLLSFI 120
             P   EER+ KR+KRDE ++D  +MKG TLLSEG+DEMVGIIY+PKT+ETR+TYEVLLSFI
Sbjct:    61 PQMQEERRAKRRKRDEDRHDINKMKGYTLLSEGIDEMVGIIYKPKTKETRETYEVLLSFI 120

Query:   121 QEALGDQPRDILCGAADEVLTVLKNDRMXXXXXXXXTENLLGSLAEERFALLVNLGKKIT 180
             Q ALGDQPRDILCGAADEVL VLKN+++         + LLG   + R+ +LVNLGKKIT
Sbjct:   121 QAALGDQPRDILCGAADEVLAVLKNEKLRDKERRKEIDLLLGQTDDTRYHVLVNLGKKIT 180

Query:   181 DFGAEQKSTTAEENIDDTYGINVQFXXXXXXXXXXTFXXXXXXXXXXXXXXXXXXNTAIH 240
             D+G +++    ++NID+TYG+NVQF           +                       
Sbjct:   181 DYGGDKEIQNMDDNIDETYGVNVQFESDEEEGDEDVYGEVREEASDDDMEGDEAVVRCTL 240

Query:   241 AENL-AGGEDAEGTGRKKDKSLHPLDIDAYWLQRRLSKIYDDAMVSQAKAGEVLNILKSA 299
             + NL A GE    + +KKD  LHP DIDA+WLQR+LS+ YDDA+VSQ KA EVL ILK+A
Sbjct:   241 SANLVASGELM--SSKKKD--LHPRDIDAFWLQRQLSRFYDDAIVSQKKADEVLEILKTA 296

Query:   300 GDDRDAENQLVLLLGYDCFDFIKMLKKYRQMILYCTLLASSQSESERQKLRDTMSEDPAL 359
              DDR+ ENQLVLLLG++ FDFIK+L+++R MILYCTLLAS+QSE+E++++   M  DP L
Sbjct:   297 SDDRECENQLVLLLGFNTFDFIKVLRQHRMMILYCTLLASAQSEAEKERIMGKMEADPEL 356

Query:   360 AKILRQLDTGKNED--GDANDSADARQSTSIRHQMXXXXXXXXXXXXXTRQVLDLEDLQF 417
             +K L QL   + ED   +     +  + + +   +              RQVLDLEDL F
Sbjct:   357 SKFLYQLHETEKEDLIREERSRRERVRQSRMDTDLETMDLDQGGEALAPRQVLDLEDLVF 416

Query:   418 SSGSHFMSNKRCELPDGSFRKQRKGYEEVHVPALKPKPMGPDETLVPIDKLPRYVQHAFE 477
             + GSHFM+NKRC+LPDGSFR+QRKGYEEVHVPALKPKP   +E L+P++KLP+Y Q  FE
Sbjct:   417 TQGSHFMANKRCQLPDGSFRRQRKGYEEVHVPALKPKPFSSEEQLLPVEKLPKYAQAGFE 476

Query:   478 DFKTLNRIQSRLCKSALESDENLLLCAPTGAGKTNVALLCMLQEIGKHINADGTINADEF 537
              FKTLNRIQS+L ++ALE+DENLLLCAPTGAGKTNVAL+CML+EIGKHIN DGTIN D+F
Sbjct:   477 GFKTLNRIQSKLYRAALETDENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDF 536

Query:   538 KIIYVAPMRSLVQEMVGNFGK 558
             KIIY+APMRSLVQEMVG+FGK
Sbjct:   537 KIIYIAPMRSLVQEMVGSFGK 557

 Score = 973 (347.6 bits), Expect = 0., Sum P(4) = 0.
 Identities = 184/213 (86%), Positives = 201/213 (94%)

Query:   815 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 874
             DEIHLLHD+RGPVLEAL+AR IRNIE TQEDVRL+GLSATLPNY+DVAT LR+ P  GLF
Sbjct:   615 DEIHLLHDDRGPVLEALVARAIRNIEMTQEDVRLIGLSATLPNYEDVATFLRVDPAKGLF 674

Query:   875 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQLLVFVHSRKETGKT 934
             YFDNSFRPV LEQ Y+G+TEKKA+KRFQ+MN+IVYEK+MEHAG+NQ+LVFVHSRKETGKT
Sbjct:   675 YFDNSFRPVPLEQTYVGITEKKAIKRFQIMNEIVYEKIMEHAGKNQVLVFVHSRKETGKT 734

Query:   935 ARAIRDMCLEKDTLGQFLREGSASMEVLRTEADQVKNGELRDLLPYGFAIHHAGMTRVDR 994
             ARAIRDMCLEKDTLG FLREGSAS EVLRTEA+Q KN EL+DLLPYGFAIHHAGMTRVDR
Sbjct:   735 ARAIRDMCLEKDTLGLFLREGSASTEVLRTEAEQCKNLELKDLLPYGFAIHHAGMTRVDR 794

Query:   995 TLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
             TLVEDLFAD+HIQVLVSTATLAWGVNLPAHTV+
Sbjct:   795 TLVEDLFADKHIQVLVSTATLAWGVNLPAHTVI 827

 Score = 786 (281.7 bits), Expect = 0., Sum P(4) = 0.
 Identities = 168/243 (69%), Positives = 191/243 (78%)

Query:  1025 TVVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDV 1084
             T VDRTLVEDLFAD+HIQVLVSTATLAWGVNLPAHTVIIKGTQ+Y+PEKGRW ELGALD+
Sbjct:   790 TRVDRTLVEDLFADKHIQVLVSTATLAWGVNLPAHTVIIKGTQVYSPEKGRWTELGALDI 849

Query:  1085 LQMLGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMISKLPDMLNAEIVLGT 1144
             LQMLGRAGRPQYDTKGEG+LIT+H ELQYYLSLLN QLP+ESQM++KLPDMLNAEIVLG 
Sbjct:   850 LQMLGRAGRPQYDTKGEGILITSHGELQYYLSLLNQQLPIESQMVAKLPDMLNAEIVLGN 909

Query:  1145 VQNLKDAVTWLGYTYLYIRMLRAPNLYGISHDALKEDPLLECHR-ADLIHTAALHLERSG 1203
             VQN K  +   G   +   +L A + +G     L   P+L C    DL  T  L+    G
Sbjct:   910 VQNAKRGLG-SGSVVILCVVLWATSTWGPPTLGLTS-PILMCRCFLDLSITC-LNCLLLG 966

Query:  1204 LIK-YDRKSGHMQVTELGRIASHYYCTHETMATYNQLLKPTLSEIELFRVFSLSGEFRHI 1262
              ++ Y   S H  VTELGRIASHYY T++T+ TYNQLLKPTLSEIELFRVFSLS EF++I
Sbjct:   967 TVEIYHAISVH--VTELGRIASHYYITNDTVQTYNQLLKPTLSEIELFRVFSLSSEFKNI 1024

Query:  1263 TVR 1265
             TVR
Sbjct:  1025 TVR 1027

 Score = 480 (174.0 bits), Expect = 3.6e-304, Sum P(3) = 3.6e-304
 Identities = 88/109 (80%), Positives = 101/109 (92%)

Query:   559 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 618
             DEIHLLHD+RGPVLEAL+AR IRNIE TQEDVRL+GLSATLPNY+DVAT LR+ P  GLF
Sbjct:   615 DEIHLLHDDRGPVLEALVARAIRNIEMTQEDVRLIGLSATLPNYEDVATFLRVDPAKGLF 674

Query:   619 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQLLV 667
             YFDNSFRPV LEQ Y+G+TEKKA+KRFQ+MN+IVYEK+MEHAG+NQ+LV
Sbjct:   675 YFDNSFRPVPLEQTYVGITEKKAIKRFQIMNEIVYEKIMEHAGKNQVLV 723

 Score = 248 (92.4 bits), Expect = 0., Sum P(4) = 0.
 Identities = 46/54 (85%), Positives = 51/54 (94%)

Query:   761 PRGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNFGK 814
             P GAGKTNVAL+CML+EIGKHIN DGTIN D+FKIIY+APMRSLVQEMVG+FGK
Sbjct:   504 PTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFGK 557

 Score = 41 (19.5 bits), Expect = 1.8e-225, Sum P(3) = 1.8e-225
 Identities = 9/28 (32%), Positives = 15/28 (53%)

Query:   748 IGAETILPVSFRLPRGAGKTNVALLCML 775
             + AE +L       RG G  +V +LC++
Sbjct:   901 LNAEIVLGNVQNAKRGLGSGSVVILCVV 928


>WB|WBGene00012896 [details] [associations]
            symbol:snrp-200 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0009792 "embryo development ending in
            birth or egg hatching" evidence=IMP] [GO:0000003 "reproduction"
            evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
            "nematode larval development" evidence=IMP] [GO:0018991
            "oviposition" evidence=IMP] [GO:0042127 "regulation of cell
            proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
            evidence=IMP] [GO:0008406 "gonad development" evidence=IMP]
            [GO:0016477 "cell migration" evidence=IMP] [GO:0007281 "germ cell
            development" evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00382 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
            GO:GO:0040007 GO:GO:0018991 GO:GO:0016477 GO:GO:0008406
            GO:GO:0002119 GO:GO:0008380 GO:GO:0006397 GO:GO:0005681
            GO:GO:0003676 GO:GO:0042127 GO:GO:0007281 GO:GO:0040020
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179
            Pfam:PF02889 SMART:SM00611 SMART:SM00973 eggNOG:COG1204
            HOGENOM:HOG000157749 GeneTree:ENSGT00640000091272 KO:K12854
            OMA:KWDVLSR GO:GO:0008026 EMBL:AL110485 RefSeq:NP_496710.1
            ProteinModelPortal:Q9U2G0 SMR:Q9U2G0 IntAct:Q9U2G0
            MINT:MINT-1062451 STRING:Q9U2G0 PaxDb:Q9U2G0
            EnsemblMetazoa:Y46G5A.4 GeneID:174901 KEGG:cel:CELE_Y46G5A.4
            UCSC:Y46G5A.4 CTD:174901 WormBase:Y46G5A.4 InParanoid:Q9U2G0
            NextBio:885976 Uniprot:Q9U2G0
        Length = 2145

 Score = 1603 (569.3 bits), Expect = 0., Sum P(5) = 0.
 Identities = 295/442 (66%), Positives = 363/442 (82%)

Query:  1027 VDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQ 1086
             VDRTLVEDLFADRHIQVL STATLAWGVNLPAHTVIIKGTQIYNPEKGRW ELGALD++Q
Sbjct:   785 VDRTLVEDLFADRHIQVLFSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWTELGALDIMQ 844

Query:  1087 MLGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMISKLPDMLNAEIVLGTVQ 1146
             MLGRAGRPQYD +GEG+LITNHSELQYYLSL+N QLPVESQM+S+L DMLNAE+VLGTV 
Sbjct:   845 MLGRAGRPQYDDRGEGILITNHSELQYYLSLMNQQLPVESQMVSRLTDMLNAEVVLGTVS 904

Query:  1147 NLKDAVTWLGYTYLYIRMLRAPNLYGISHDALKEDPLLECHRADLIHTAALHLERSGLIK 1206
             ++ +A  WLGYT+L++RML+ P LYGI+H+  + DPLLE  RADLIHTA + L+++GLIK
Sbjct:   905 SVSEATNWLGYTFLFVRMLKNPTLYGITHEQARADPLLEQRRADLIHTACVLLDKAGLIK 964

Query:  1207 YDRKSGHMQVTELGRIASHYYCTHETMATYNQLLKPTLSEIELFRVFSLSGEFRHITVRX 1266
             YD++SG +Q TELGRIASH+YCT+E+M TYN+LL  T S+I+LFR+FS+S EF+ ++VR 
Sbjct:   965 YDKRSGIIQATELGRIASHFYCTYESMQTYNKLLVETCSDIDLFRIFSMSSEFKLLSVRD 1024

Query:  1267 XXXXXXXXXXXRAPIPIKESTDEPSAKVNILLQAYISQLKLEGFALMSDMVFVTQSAARL 1326
                         APIPIKE+ DE SAK N+LLQAYISQLKLEGFAL +DMVFV QSA RL
Sbjct:  1025 EEKLELQKMAEHAPIPIKENLDEASAKTNVLLQAYISQLKLEGFALQADMVFVAQSAGRL 1084

Query:  1327 MRAIFEIVLYRGWAQLADKALSLCKMVDRRMWQSMSPLRQFRXXXXXXXXXXXXXNFPWE 1386
              RA+FEIVL+RGWA LA K L+LCKMV +R W S++PL QF+             N+ ++
Sbjct:  1085 FRALFEIVLWRGWAGLAQKVLTLCKMVTQRQWGSLNPLHQFKKIPSEVVRSIDKKNYSFD 1144

Query:  1387 RLYDLGPNEIGELIRVPKLGKTIHKYVHQFPKLELATHIQPITRSTLRVELTISPDFQWD 1446
             RLYDL  +++G+LI++PK+GK + K++ QFPKLE+ T IQPITR+T+R+ELTI+PDF+WD
Sbjct:  1145 RLYDLDQHQLGDLIKMPKMGKPLFKFIRQFPKLEMTTLIQPITRTTMRIELTITPDFKWD 1204

Query:  1447 EKLHGGSEGFWILVEDVDSEAI 1468
             EK+HG +EGFWI +ED D E I
Sbjct:  1205 EKVHGSAEGFWIFIEDTDGEKI 1226

 Score = 1249 (444.7 bits), Expect = 0., Sum P(5) = 0.
 Identities = 269/562 (47%), Positives = 353/562 (62%)

Query:     1 MADAAARQLQYEYKANSNLVLQADVRLIERRSRDEATGEVCSLVGK-LEGTRMGDRFMRT 59
             MAD  AR  QYEY+ NSNLVL  D  L +RR R+E TGEV  +  K +   +MGDR ++ 
Sbjct:     1 MADELARIQQYEYRQNSNLVLSVDYNLTDRRGREEPTGEVLPITDKEMRKMKMGDRAIKG 60

Query:    60 KPIKAEERKVKRQKRDEAQYDFTRMKGATLLSEGVDEMVGIIYRPKTQETRQTYEVLLSF 119
             K    +++K +++K DE    F    G  +L +  +E++G  Y+P+TQET+QTYEV+LSF
Sbjct:    61 KAPVQDQKKKRKKKDDEKAQQF----GRNVLVDN-NELMGA-YKPRTQETKQTYEVILSF 114

Query:   120 IQEALGDQPRDILCGAADEVLTVLKNDRMXXXXXXXXTENLLGSLAEERFALLVNLGKKI 179
             I +ALGD PR++LCGAADEVL  LKND+          E LLG L ++R A+L+NL KKI
Sbjct:   115 ILDALGDVPREVLCGAADEVLLTLKNDKFRDKEKKKEVEALLGPLTDDRIAVLINLSKKI 174

Query:   180 TDFGAEQKSTT-AEENIDDTYGINVQFXXXXXXXXXXTFXXXXXXXXXXXXXXXXXXNTA 238
             +DF  E+++    + +I +  G+NVQF                                 
Sbjct:   175 SDFSIEEENKPEGDGDIYENEGVNVQFDSDEEEDDGGMVNEIKGDSEEESEEEEGVDTD- 233

Query:   239 IHAENLAGGEDAEGTGRKKDKSLHPLDIDAYWLQRRLSKIYDDAMVSQAKAGEVLNILKS 298
              +   L G        +K    LHP DIDA+W+QR L+K + D +++Q K  EV+ ILK+
Sbjct:   234 -YTATLKGDGHLTEDEQKARGILHPRDIDAHWIQRSLAKYFKDPLIAQQKQTEVIGILKN 292

Query:   299 AGDDRDAENQLVLLLGYDCFDFIKMLKKYRQMILYCTLLASSQSESERQKLRDTMSEDPA 358
             A DDRDAENQLVLLLG+D F+FIK L++ R MILYCTLL  + +E ER ++ D M   P 
Sbjct:   293 AADDRDAENQLVLLLGFDQFEFIKCLRQNRLMILYCTLLRQA-NEKERLQIEDDMRSRPE 351

Query:   359 LAKILRQL-DTGKNEDGDANDSA-DARQSTSIRHQMXXXXXXXXXXXXXTRQVLDLEDLQ 416
             L  IL  L +T +        S  DA +S   +                 R++LDL DL 
Sbjct:   352 LHPILALLQETDEGSVVQVEKSKRDAEKSK--KAATAANEAISAGQWQAGRKMLDLNDLT 409

Query:   417 FSSGSHFMSNKRCELPDGSFRKQRKGYEEVHVPALKPKPMGPDETLVPIDKLPRYVQHAF 476
             FS GSH MSNKRCELPDGS+R+Q+K YEE+HVPALKP+P    E LV + +LP++ Q AF
Sbjct:   410 FSQGSHLMSNKRCELPDGSYRRQKKSYEEIHVPALKPRPFAEGEKLVSVSELPKWAQPAF 469

Query:   477 EDFKTLNRIQSRLCKSALESDENLLLCAPTGAGKTNVALLCMLQEIGKHINADGTINADE 536
             + +K+LNRIQSRLC SAL S E+LLLCAPTGAGKTNVALL MLQEIG H+  DG++  DE
Sbjct:   470 DGYKSLNRIQSRLCDSALRSKEHLLLCAPTGAGKTNVALLTMLQEIGNHLAEDGSVKLDE 529

Query:   537 FKIIYVAPMRSLVQEMVGNFGK 558
             FKI+Y+APM+SLVQEMVG+F K
Sbjct:   530 FKIVYIAPMKSLVQEMVGSFSK 551

 Score = 887 (317.3 bits), Expect = 0., Sum P(5) = 0.
 Identities = 167/213 (78%), Positives = 192/213 (90%)

Query:   815 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 874
             DEIHLLHD+RGPVLE+++ RTIR +E   ++ RLVGLSATLPNY+DVAT LR+KPE  L 
Sbjct:   609 DEIHLLHDDRGPVLESIVVRTIRQMEQNHDECRLVGLSATLPNYQDVATFLRVKPEH-LH 667

Query:   875 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQLLVFVHSRKETGKT 934
             +FDNS+RPV LEQQYIGVTEKKALKRFQ MN++VY+K+MEHAG++Q+LVFVHSRKET KT
Sbjct:   668 FFDNSYRPVPLEQQYIGVTEKKALKRFQAMNEVVYDKIMEHAGKSQVLVFVHSRKETAKT 727

Query:   935 ARAIRDMCLEKDTLGQFLREGSASMEVLRTEADQVKNGELRDLLPYGFAIHHAGMTRVDR 994
             A+AIRD CLEKDTL  F+REGSAS E+LRTEA+Q KN +L+DLLPYGFAIHHAGM RVDR
Sbjct:   728 AKAIRDACLEKDTLSAFMREGSASTEILRTEAEQAKNLDLKDLLPYGFAIHHAGMNRVDR 787

Query:   995 TLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
             TLVEDLFADRHIQVL STATLAWGVNLPAHTV+
Sbjct:   788 TLVEDLFADRHIQVLFSTATLAWGVNLPAHTVI 820

 Score = 565 (203.9 bits), Expect = 0., Sum P(5) = 0.
 Identities = 106/214 (49%), Positives = 149/214 (69%)

Query:  1467 AIRLIQACVDVLSSNGWLSPAVAAMEVAQMITQAMWSKDSYLKQLPHFNADIIKRCTEKG 1526
             A RL+QACVDVLSSNGWLSPA+ AME++QM+TQAM+S + YLKQLPH +A +++R   K 
Sbjct:  1918 ACRLVQACVDVLSSNGWLSPAIHAMELSQMLTQAMYSNEPYLKQLPHCSAALLERAKAKE 1977

Query:  1527 VETVFDIMXXXXXXXXXXXXXXXXXXADVARFCNRYPNIELSYEVLNKDRIXXXXXXXXX 1586
             V +VF+++                  ADVARFCN YP+IE++ E+ N D +         
Sbjct:  1978 VTSVFELLELENDDRSDILQMEGAELADVARFCNHYPSIEVATELEN-DVVTSNDNLMLA 2036

Query:  1587 XXLDREDEVTG---PVIAPFYPQKR-EEGWWVVIGDPKTNSLLSIKRLTLQQKAKIKLDF 1642
               L+R++++ G   PV+AP +PQKR EEGWW+VIGD ++N+LL+IKRL + +K+ ++LDF
Sbjct:  2037 VSLERDNDIDGLAPPVVAPLFPQKRKEEGWWLVIGDSESNALLTIKRLVINEKSSVQLDF 2096

Query:  1643 VAPNPGHHSYALYFMSDAYLGCDQEYKFSIDVSE 1676
              AP PGHH + L+F+SD+YLG DQE+  +  V E
Sbjct:  2097 AAPRPGHHKFKLFFISDSYLGADQEFDVAFKVEE 2130

 Score = 426 (155.0 bits), Expect = 0., Sum P(4) = 0.
 Identities = 79/109 (72%), Positives = 97/109 (88%)

Query:   559 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 618
             DEIHLLHD+RGPVLE+++ RTIR +E   ++ RLVGLSATLPNY+DVAT LR+KPE  L 
Sbjct:   609 DEIHLLHDDRGPVLESIVVRTIRQMEQNHDECRLVGLSATLPNYQDVATFLRVKPEH-LH 667

Query:   619 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQLLV 667
             +FDNS+RPV LEQQYIGVTEKKALKRFQ MN++VY+K+MEHAG++Q+LV
Sbjct:   668 FFDNSYRPVPLEQQYIGVTEKKALKRFQAMNEVVYDKIMEHAGKSQVLV 716

 Score = 416 (151.5 bits), Expect = 3.5e-277, Sum P(4) = 3.5e-277
 Identities = 135/520 (25%), Positives = 236/520 (45%)

Query:  1028 DRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQM 1087
             D  +V+ LF    IQV V    + + + + A+ V++  TQ YN +   + +    D+L M
Sbjct:  1627 DVHIVQQLFESNAIQVCVVPRGMCYQIEMSAYLVVVMDTQFYNGKYHVYEDYPIADMLHM 1686

Query:  1088 LGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMISKLPDMLNAEIVLGTVQN 1147
             +G A RP  D+  + V++   S+  YY   L   LPVES +   L D  NAEIV  T++N
Sbjct:  1687 VGLANRPILDSDAKCVVMCQTSKRAYYKKFLCDPLPVESHLDHCLHDHFNAEIVTKTIEN 1746

Query:  1148 LKDAVTWLGYTYLYIRMLRAPNLY---GISHDALKEDPLLECHRADLIHTAALHLERSGL 1204
              +DA+ +L +T LY RM + PN Y   G +H  L  D L E     L+      LE S  
Sbjct:  1747 KQDAIDYLTWTLLYRRMTQNPNYYNLQGTTHRHLS-DALSE-----LVELTLKDLENSKC 1800

Query:  1205 IKYDRKSGHMQVTELGRIASHYYCTHETMATYNQLLKPTLSEIELFRVFSLSGEFRHITV 1264
             I    +   + +  LG IAS+YY +++T+  ++  LK       L  + S S EF ++ +
Sbjct:  1801 IAVKDEMDTVSLN-LGMIASYYYISYQTIELFSMSLKEKTKTRALIEIISASSEFGNVPM 1859

Query:  1265 RXXXXXXXXXXXXRAPIPIK-ESTDEPSAKVNILLQAYISQLKLEGFALMSDMVFVTQSA 1323
             R            R P  +K +   +P  KVN+L+ A++S++KL    L  D   +   A
Sbjct:  1860 RHKEDVILRQLAERLPGQLKNQKFTDPHVKVNLLIHAHLSRVKLTA-ELNKDTELIVLRA 1918

Query:  1324 ARLMRAIFEIVLYRGWAQLADKALSLCKMVDRRMWQSMSPLRQFRXXXXXXXXXXXXXNF 1383
              RL++A  +++   GW   A  A+ L +M+ + M+ +   L+Q                 
Sbjct:  1919 CRLVQACVDVLSSNGWLSPAIHAMELSQMLTQAMYSNEPYLKQLPHCSAALLERAKAKEV 1978

Query:  1384 PWE-RLYDLGPNEIGELIRVPKLGKT-IHKYVHQFPKLELATHIQ-PITRSTLRVELTIS 1440
                  L +L  ++  +++++       + ++ + +P +E+AT ++  +  S   + L +S
Sbjct:  1979 TSVFELLELENDDRSDILQMEGAELADVARFCNHYPSIEVATELENDVVTSNDNLMLAVS 2038

Query:  1441 PDFQWDEKLHG--------------GSEGFWILVEDVDSEAIRLIQACVDVLSSNGWLSP 1486
                + D  + G                EG+W+++ D +S A+  I+  V  ++    +  
Sbjct:  2039 --LERDNDIDGLAPPVVAPLFPQKRKEEGWWLVIGDSESNALLTIKRLV--INEKSSVQL 2094

Query:  1487 AVAAMEVAQMITQAMWSKDSYLKQLPHFNADIIKRCTEKG 1526
               AA        +  +  DSYL     F  D+  +  E G
Sbjct:  2095 DFAAPRPGHHKFKLFFISDSYLGADQEF--DVAFKVEEPG 2132

 Score = 385 (140.6 bits), Expect = 2.7e-282, Sum P(5) = 2.7e-282
 Identities = 61/92 (66%), Positives = 82/92 (89%)

Query:   668 STLRVELTISPDFQWDEKLHGGSEGFWILVEDVDSEVVLHHEYFLLKSRYATDDHVVKFF 727
             +T+R+ELTI+PDF+WDEK+HG +EGFWI +ED D E +LHHE+FLLK ++ +D+HVVK  
Sbjct:  1189 TTMRIELTITPDFKWDEKVHGSAEGFWIFIEDTDGEKILHHEFFLLKQKFCSDEHVVKMI 1248

Query:   728 VPVFEPLPPQYFLRIVSDRWIGAETILPVSFR 759
             VP+F+P+PP Y++RIVSDRWIGAET+LP+SFR
Sbjct:  1249 VPMFDPMPPLYYVRIVSDRWIGAETVLPISFR 1280

 Score = 210 (79.0 bits), Expect = 0., Sum P(5) = 0.
 Identities = 39/54 (72%), Positives = 46/54 (85%)

Query:   761 PRGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNFGK 814
             P GAGKTNVALL MLQEIG H+  DG++  DEFKI+Y+APM+SLVQEMVG+F K
Sbjct:   498 PTGAGKTNVALLTMLQEIGNHLAEDGSVKLDEFKIVYIAPMKSLVQEMVGSFSK 551

 Score = 207 (77.9 bits), Expect = 2.7e-282, Sum P(5) = 2.7e-282
 Identities = 72/232 (31%), Positives = 109/232 (46%)

Query:   802 RSLVQEMVGNFGKDEIHLLHDERGPVLEALIARTIRNIEATQED-VRLVGLSATLPNYKD 860
             R  VQ  V  F  D++H++    G V E + +RT R I +  E  VR+V LS++L N +D
Sbjct:  1436 RKSVQN-VKLFIADDLHMIGASNGAVFEVVCSRT-RYISSQLESAVRVVALSSSLTNARD 1493

Query:   861 VATLLRIKPETGLFYFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQ 920
             +   L     +  F F  S RPV L+ +           RF  M   VY+ +  HAG+ +
Sbjct:  1494 LGMWLGCSA-SATFNFMPSTRPVPLDLEIKSFNLSHNASRFAAMERPVYQAICRHAGKLE 1552

Query:   921 ---LLVFVHSRKETGKTARAIRDMCLEKDTLGQFLR--EGSASMEVLRTEADQVKNGELR 975
                 LVFV  R++T   A A+  M L      +FLR  E   + + L   AD +++  LR
Sbjct:  1553 PKPALVFVPVRRQTRPVAVALLTMALADGAPKRFLRLAEHDDTFQALL--AD-IEDESLR 1609

Query:   976 DLLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
             + +  G    H G    D  +V+ LF    IQV V    + + + + A+ VV
Sbjct:  1610 ESVSCGVGFLHEGTAPKDVHIVQQLFESNAIQVCVVPRGMCYQIEMSAYLVV 1661

 Score = 129 (50.5 bits), Expect = 1.9e-73, Sum P(3) = 1.9e-73
 Identities = 33/112 (29%), Positives = 58/112 (51%)

Query:   453 PKPMGPDETLVPIDKLP------RYVQHAFED--FKTLNRIQSRLCKSALESDENLLLCA 504
             P+   P   L+ +  LP      +  Q  F +  FK  N IQ+++ ++  ES+EN+++CA
Sbjct:  1285 PEKYPPPTELLDLQPLPISAVTNKEFQTVFAESGFKVFNPIQTQVFRTVFESNENVIVCA 1344

Query:   505 PTGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNF 556
             P G+GKT +A L +L    +H       N  E K +Y+ PM  +  ++  ++
Sbjct:  1345 PNGSGKTAIAELAVL----RHFE-----NTPEAKAVYITPMEDMATKVYADW 1387

 Score = 126 (49.4 bits), Expect = 5.9e-193, Sum P(3) = 5.9e-193
 Identities = 39/118 (33%), Positives = 57/118 (48%)

Query:   546 RSLVQEMVGNFGKDEIHLLHDERGPVLEALIARTIRNIEATQED-VRLVGLSATLPNYKD 604
             R  VQ  V  F  D++H++    G V E + +RT R I +  E  VR+V LS++L N +D
Sbjct:  1436 RKSVQN-VKLFIADDLHMIGASNGAVFEVVCSRT-RYISSQLESAVRVVALSSSLTNARD 1493

Query:   605 VATLLRIKPETGLFYFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGR 662
             +   L     +  F F  S RPV L+ +           RF  M   VY+ +  HAG+
Sbjct:  1494 LGMWLGCSA-SATFNFMPSTRPVPLDLEIKSFNLSHNASRFAAMERPVYQAICRHAGK 1550

 Score = 93 (37.8 bits), Expect = 4.1e-243, Sum P(4) = 4.1e-243
 Identities = 41/219 (18%), Positives = 84/219 (38%)

Query:  1454 EGFWILVEDV--DSEAIRLIQACVDVLSSNGWLSPAVAAMEVAQMITQAMWSKDSYLKQL 1511
             EGF +  + V     A RL +A  +++   GW   A   + + +M+TQ  W   + L Q 
Sbjct:  1066 EGFALQADMVFVAQSAGRLFRALFEIVLWRGWAGLAQKVLTLCKMVTQRQWGSLNPLHQF 1125

Query:  1512 PHFNADIIKRCTEKGVETVFDIMXXXXXXXXXXXXXXXXXXADVARFCNRYPNIELSYEV 1571
                 +++++   +K     FD +                    + +F  ++P +E++  +
Sbjct:  1126 KKIPSEVVRSIDKKNYS--FDRLYDLDQHQLGDLIKMPKMGKPLFKFIRQFPKLEMTTLI 1183

Query:  1572 LNKDRIXXXXXXXXXXXLDREDEVTGPVIAPFYPQKREEGWWVVIGDPKTNSLLSIKRLT 1631
                 R               +++V G            EG+W+ I D     +L  +   
Sbjct:  1184 QPITRTTMRIELTITPDFKWDEKVHGSA----------EGFWIFIEDTDGEKILHHEFFL 1233

Query:  1632 LQQKA---KIKLDFVAP--NPGHHSYALYFMSDAYLGCD 1665
             L+QK    +  +  + P  +P    Y +  +SD ++G +
Sbjct:  1234 LKQKFCSDEHVVKMIVPMFDPMPPLYYVRIVSDRWIGAE 1272

 Score = 69 (29.3 bits), Expect = 2.8e-172, Sum P(3) = 2.8e-172
 Identities = 18/78 (23%), Positives = 41/78 (52%)

Query:   691 EGFWILVEDVDSEVVLHHEYFLLKSRYATDDHVVKFFVPVFEPLPPQYFLRIVSDRWIGA 750
             EG+W+++ D +S  +L  +  ++  + +     + F  P   P   ++ L  +SD ++GA
Sbjct:  2064 EGWWLVIGDSESNALLTIKRLVINEKSSVQ---LDFAAP--RPGHHKFKLFFISDSYLGA 2118

Query:   751 ETILPVSFRLPRGAGKTN 768
             +    V+F++    G++N
Sbjct:  2119 DQEFDVAFKVEE-PGRSN 2135

 Score = 66 (28.3 bits), Expect = 1.1e-248, Sum P(5) = 1.1e-248
 Identities = 21/83 (25%), Positives = 37/83 (44%)

Query:   730 VFEPLPPQYFLRIVSDRWIGAETILPVSFRLPRGAGKTNVALLCMLQEIGKHINADGTIN 789
             VF P+  Q F  +        E ++  +   P G+GKT +A L +L    +H       N
Sbjct:  1321 VFNPIQTQVFRTVFESN----ENVIVCA---PNGSGKTAIAELAVL----RHFE-----N 1364

Query:   790 ADEFKIIYVAPMRSLVQEMVGNF 812
               E K +Y+ PM  +  ++  ++
Sbjct:  1365 TPEAKAVYITPMEDMATKVYADW 1387

 Score = 39 (18.8 bits), Expect = 7.4e-246, Sum P(5) = 7.4e-246
 Identities = 7/25 (28%), Positives = 13/25 (52%)

Query:   754 LPVSFRLPRGAGKTNVALLCMLQEI 778
             +P+   L   + KTNV L   + ++
Sbjct:  1039 IPIKENLDEASAKTNVLLQAYISQL 1063

 Score = 38 (18.4 bits), Expect = 0., Sum P(5) = 0.
 Identities = 6/18 (33%), Positives = 11/18 (61%)

Query:  1513 HFNADIIKRCTEKGVETV 1530
             HFNA+I+ +  E   + +
Sbjct:  1734 HFNAEIVTKTIENKQDAI 1751

 Score = 38 (18.4 bits), Expect = 0., Sum P(4) = 0.
 Identities = 8/29 (27%), Positives = 15/29 (51%)

Query:   637 TEKKALKRFQVMNDIVYEKVMEHAGRNQL 665
             TE +  K   + + + Y   + HAG N++
Sbjct:   757 TEAEQAKNLDLKDLLPYGFAIHHAGMNRV 785


>UNIPROTKB|Q9U2G0 [details] [associations]
            symbol:Y46G5A.4 "Putative U5 small nuclear
            ribonucleoprotein 200 kDa helicase" species:6239 "Caenorhabditis
            elegans" [GO:0005681 "spliceosomal complex" evidence=ISS]
            [GO:0000398 "mRNA splicing, via spliceosome" evidence=ISS]
            InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00382
            SMART:SM00490 GO:GO:0005524 GO:GO:0009792 GO:GO:0040007
            GO:GO:0018991 GO:GO:0016477 GO:GO:0008406 GO:GO:0002119
            GO:GO:0008380 GO:GO:0006397 GO:GO:0005681 GO:GO:0003676
            GO:GO:0042127 GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889
            SMART:SM00611 SMART:SM00973 eggNOG:COG1204 HOGENOM:HOG000157749
            GeneTree:ENSGT00640000091272 KO:K12854 OMA:KWDVLSR GO:GO:0008026
            EMBL:AL110485 RefSeq:NP_496710.1 ProteinModelPortal:Q9U2G0
            SMR:Q9U2G0 IntAct:Q9U2G0 MINT:MINT-1062451 STRING:Q9U2G0
            PaxDb:Q9U2G0 EnsemblMetazoa:Y46G5A.4 GeneID:174901
            KEGG:cel:CELE_Y46G5A.4 UCSC:Y46G5A.4 CTD:174901 WormBase:Y46G5A.4
            InParanoid:Q9U2G0 NextBio:885976 Uniprot:Q9U2G0
        Length = 2145

 Score = 1603 (569.3 bits), Expect = 0., Sum P(5) = 0.
 Identities = 295/442 (66%), Positives = 363/442 (82%)

Query:  1027 VDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQ 1086
             VDRTLVEDLFADRHIQVL STATLAWGVNLPAHTVIIKGTQIYNPEKGRW ELGALD++Q
Sbjct:   785 VDRTLVEDLFADRHIQVLFSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWTELGALDIMQ 844

Query:  1087 MLGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMISKLPDMLNAEIVLGTVQ 1146
             MLGRAGRPQYD +GEG+LITNHSELQYYLSL+N QLPVESQM+S+L DMLNAE+VLGTV 
Sbjct:   845 MLGRAGRPQYDDRGEGILITNHSELQYYLSLMNQQLPVESQMVSRLTDMLNAEVVLGTVS 904

Query:  1147 NLKDAVTWLGYTYLYIRMLRAPNLYGISHDALKEDPLLECHRADLIHTAALHLERSGLIK 1206
             ++ +A  WLGYT+L++RML+ P LYGI+H+  + DPLLE  RADLIHTA + L+++GLIK
Sbjct:   905 SVSEATNWLGYTFLFVRMLKNPTLYGITHEQARADPLLEQRRADLIHTACVLLDKAGLIK 964

Query:  1207 YDRKSGHMQVTELGRIASHYYCTHETMATYNQLLKPTLSEIELFRVFSLSGEFRHITVRX 1266
             YD++SG +Q TELGRIASH+YCT+E+M TYN+LL  T S+I+LFR+FS+S EF+ ++VR 
Sbjct:   965 YDKRSGIIQATELGRIASHFYCTYESMQTYNKLLVETCSDIDLFRIFSMSSEFKLLSVRD 1024

Query:  1267 XXXXXXXXXXXRAPIPIKESTDEPSAKVNILLQAYISQLKLEGFALMSDMVFVTQSAARL 1326
                         APIPIKE+ DE SAK N+LLQAYISQLKLEGFAL +DMVFV QSA RL
Sbjct:  1025 EEKLELQKMAEHAPIPIKENLDEASAKTNVLLQAYISQLKLEGFALQADMVFVAQSAGRL 1084

Query:  1327 MRAIFEIVLYRGWAQLADKALSLCKMVDRRMWQSMSPLRQFRXXXXXXXXXXXXXNFPWE 1386
              RA+FEIVL+RGWA LA K L+LCKMV +R W S++PL QF+             N+ ++
Sbjct:  1085 FRALFEIVLWRGWAGLAQKVLTLCKMVTQRQWGSLNPLHQFKKIPSEVVRSIDKKNYSFD 1144

Query:  1387 RLYDLGPNEIGELIRVPKLGKTIHKYVHQFPKLELATHIQPITRSTLRVELTISPDFQWD 1446
             RLYDL  +++G+LI++PK+GK + K++ QFPKLE+ T IQPITR+T+R+ELTI+PDF+WD
Sbjct:  1145 RLYDLDQHQLGDLIKMPKMGKPLFKFIRQFPKLEMTTLIQPITRTTMRIELTITPDFKWD 1204

Query:  1447 EKLHGGSEGFWILVEDVDSEAI 1468
             EK+HG +EGFWI +ED D E I
Sbjct:  1205 EKVHGSAEGFWIFIEDTDGEKI 1226

 Score = 1249 (444.7 bits), Expect = 0., Sum P(5) = 0.
 Identities = 269/562 (47%), Positives = 353/562 (62%)

Query:     1 MADAAARQLQYEYKANSNLVLQADVRLIERRSRDEATGEVCSLVGK-LEGTRMGDRFMRT 59
             MAD  AR  QYEY+ NSNLVL  D  L +RR R+E TGEV  +  K +   +MGDR ++ 
Sbjct:     1 MADELARIQQYEYRQNSNLVLSVDYNLTDRRGREEPTGEVLPITDKEMRKMKMGDRAIKG 60

Query:    60 KPIKAEERKVKRQKRDEAQYDFTRMKGATLLSEGVDEMVGIIYRPKTQETRQTYEVLLSF 119
             K    +++K +++K DE    F    G  +L +  +E++G  Y+P+TQET+QTYEV+LSF
Sbjct:    61 KAPVQDQKKKRKKKDDEKAQQF----GRNVLVDN-NELMGA-YKPRTQETKQTYEVILSF 114

Query:   120 IQEALGDQPRDILCGAADEVLTVLKNDRMXXXXXXXXTENLLGSLAEERFALLVNLGKKI 179
             I +ALGD PR++LCGAADEVL  LKND+          E LLG L ++R A+L+NL KKI
Sbjct:   115 ILDALGDVPREVLCGAADEVLLTLKNDKFRDKEKKKEVEALLGPLTDDRIAVLINLSKKI 174

Query:   180 TDFGAEQKSTT-AEENIDDTYGINVQFXXXXXXXXXXTFXXXXXXXXXXXXXXXXXXNTA 238
             +DF  E+++    + +I +  G+NVQF                                 
Sbjct:   175 SDFSIEEENKPEGDGDIYENEGVNVQFDSDEEEDDGGMVNEIKGDSEEESEEEEGVDTD- 233

Query:   239 IHAENLAGGEDAEGTGRKKDKSLHPLDIDAYWLQRRLSKIYDDAMVSQAKAGEVLNILKS 298
              +   L G        +K    LHP DIDA+W+QR L+K + D +++Q K  EV+ ILK+
Sbjct:   234 -YTATLKGDGHLTEDEQKARGILHPRDIDAHWIQRSLAKYFKDPLIAQQKQTEVIGILKN 292

Query:   299 AGDDRDAENQLVLLLGYDCFDFIKMLKKYRQMILYCTLLASSQSESERQKLRDTMSEDPA 358
             A DDRDAENQLVLLLG+D F+FIK L++ R MILYCTLL  + +E ER ++ D M   P 
Sbjct:   293 AADDRDAENQLVLLLGFDQFEFIKCLRQNRLMILYCTLLRQA-NEKERLQIEDDMRSRPE 351

Query:   359 LAKILRQL-DTGKNEDGDANDSA-DARQSTSIRHQMXXXXXXXXXXXXXTRQVLDLEDLQ 416
             L  IL  L +T +        S  DA +S   +                 R++LDL DL 
Sbjct:   352 LHPILALLQETDEGSVVQVEKSKRDAEKSK--KAATAANEAISAGQWQAGRKMLDLNDLT 409

Query:   417 FSSGSHFMSNKRCELPDGSFRKQRKGYEEVHVPALKPKPMGPDETLVPIDKLPRYVQHAF 476
             FS GSH MSNKRCELPDGS+R+Q+K YEE+HVPALKP+P    E LV + +LP++ Q AF
Sbjct:   410 FSQGSHLMSNKRCELPDGSYRRQKKSYEEIHVPALKPRPFAEGEKLVSVSELPKWAQPAF 469

Query:   477 EDFKTLNRIQSRLCKSALESDENLLLCAPTGAGKTNVALLCMLQEIGKHINADGTINADE 536
             + +K+LNRIQSRLC SAL S E+LLLCAPTGAGKTNVALL MLQEIG H+  DG++  DE
Sbjct:   470 DGYKSLNRIQSRLCDSALRSKEHLLLCAPTGAGKTNVALLTMLQEIGNHLAEDGSVKLDE 529

Query:   537 FKIIYVAPMRSLVQEMVGNFGK 558
             FKI+Y+APM+SLVQEMVG+F K
Sbjct:   530 FKIVYIAPMKSLVQEMVGSFSK 551

 Score = 887 (317.3 bits), Expect = 0., Sum P(5) = 0.
 Identities = 167/213 (78%), Positives = 192/213 (90%)

Query:   815 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 874
             DEIHLLHD+RGPVLE+++ RTIR +E   ++ RLVGLSATLPNY+DVAT LR+KPE  L 
Sbjct:   609 DEIHLLHDDRGPVLESIVVRTIRQMEQNHDECRLVGLSATLPNYQDVATFLRVKPEH-LH 667

Query:   875 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQLLVFVHSRKETGKT 934
             +FDNS+RPV LEQQYIGVTEKKALKRFQ MN++VY+K+MEHAG++Q+LVFVHSRKET KT
Sbjct:   668 FFDNSYRPVPLEQQYIGVTEKKALKRFQAMNEVVYDKIMEHAGKSQVLVFVHSRKETAKT 727

Query:   935 ARAIRDMCLEKDTLGQFLREGSASMEVLRTEADQVKNGELRDLLPYGFAIHHAGMTRVDR 994
             A+AIRD CLEKDTL  F+REGSAS E+LRTEA+Q KN +L+DLLPYGFAIHHAGM RVDR
Sbjct:   728 AKAIRDACLEKDTLSAFMREGSASTEILRTEAEQAKNLDLKDLLPYGFAIHHAGMNRVDR 787

Query:   995 TLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
             TLVEDLFADRHIQVL STATLAWGVNLPAHTV+
Sbjct:   788 TLVEDLFADRHIQVLFSTATLAWGVNLPAHTVI 820

 Score = 565 (203.9 bits), Expect = 0., Sum P(5) = 0.
 Identities = 106/214 (49%), Positives = 149/214 (69%)

Query:  1467 AIRLIQACVDVLSSNGWLSPAVAAMEVAQMITQAMWSKDSYLKQLPHFNADIIKRCTEKG 1526
             A RL+QACVDVLSSNGWLSPA+ AME++QM+TQAM+S + YLKQLPH +A +++R   K 
Sbjct:  1918 ACRLVQACVDVLSSNGWLSPAIHAMELSQMLTQAMYSNEPYLKQLPHCSAALLERAKAKE 1977

Query:  1527 VETVFDIMXXXXXXXXXXXXXXXXXXADVARFCNRYPNIELSYEVLNKDRIXXXXXXXXX 1586
             V +VF+++                  ADVARFCN YP+IE++ E+ N D +         
Sbjct:  1978 VTSVFELLELENDDRSDILQMEGAELADVARFCNHYPSIEVATELEN-DVVTSNDNLMLA 2036

Query:  1587 XXLDREDEVTG---PVIAPFYPQKR-EEGWWVVIGDPKTNSLLSIKRLTLQQKAKIKLDF 1642
               L+R++++ G   PV+AP +PQKR EEGWW+VIGD ++N+LL+IKRL + +K+ ++LDF
Sbjct:  2037 VSLERDNDIDGLAPPVVAPLFPQKRKEEGWWLVIGDSESNALLTIKRLVINEKSSVQLDF 2096

Query:  1643 VAPNPGHHSYALYFMSDAYLGCDQEYKFSIDVSE 1676
              AP PGHH + L+F+SD+YLG DQE+  +  V E
Sbjct:  2097 AAPRPGHHKFKLFFISDSYLGADQEFDVAFKVEE 2130

 Score = 426 (155.0 bits), Expect = 0., Sum P(4) = 0.
 Identities = 79/109 (72%), Positives = 97/109 (88%)

Query:   559 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 618
             DEIHLLHD+RGPVLE+++ RTIR +E   ++ RLVGLSATLPNY+DVAT LR+KPE  L 
Sbjct:   609 DEIHLLHDDRGPVLESIVVRTIRQMEQNHDECRLVGLSATLPNYQDVATFLRVKPEH-LH 667

Query:   619 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQLLV 667
             +FDNS+RPV LEQQYIGVTEKKALKRFQ MN++VY+K+MEHAG++Q+LV
Sbjct:   668 FFDNSYRPVPLEQQYIGVTEKKALKRFQAMNEVVYDKIMEHAGKSQVLV 716

 Score = 416 (151.5 bits), Expect = 3.5e-277, Sum P(4) = 3.5e-277
 Identities = 135/520 (25%), Positives = 236/520 (45%)

Query:  1028 DRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQM 1087
             D  +V+ LF    IQV V    + + + + A+ V++  TQ YN +   + +    D+L M
Sbjct:  1627 DVHIVQQLFESNAIQVCVVPRGMCYQIEMSAYLVVVMDTQFYNGKYHVYEDYPIADMLHM 1686

Query:  1088 LGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMISKLPDMLNAEIVLGTVQN 1147
             +G A RP  D+  + V++   S+  YY   L   LPVES +   L D  NAEIV  T++N
Sbjct:  1687 VGLANRPILDSDAKCVVMCQTSKRAYYKKFLCDPLPVESHLDHCLHDHFNAEIVTKTIEN 1746

Query:  1148 LKDAVTWLGYTYLYIRMLRAPNLY---GISHDALKEDPLLECHRADLIHTAALHLERSGL 1204
              +DA+ +L +T LY RM + PN Y   G +H  L  D L E     L+      LE S  
Sbjct:  1747 KQDAIDYLTWTLLYRRMTQNPNYYNLQGTTHRHLS-DALSE-----LVELTLKDLENSKC 1800

Query:  1205 IKYDRKSGHMQVTELGRIASHYYCTHETMATYNQLLKPTLSEIELFRVFSLSGEFRHITV 1264
             I    +   + +  LG IAS+YY +++T+  ++  LK       L  + S S EF ++ +
Sbjct:  1801 IAVKDEMDTVSLN-LGMIASYYYISYQTIELFSMSLKEKTKTRALIEIISASSEFGNVPM 1859

Query:  1265 RXXXXXXXXXXXXRAPIPIK-ESTDEPSAKVNILLQAYISQLKLEGFALMSDMVFVTQSA 1323
             R            R P  +K +   +P  KVN+L+ A++S++KL    L  D   +   A
Sbjct:  1860 RHKEDVILRQLAERLPGQLKNQKFTDPHVKVNLLIHAHLSRVKLTA-ELNKDTELIVLRA 1918

Query:  1324 ARLMRAIFEIVLYRGWAQLADKALSLCKMVDRRMWQSMSPLRQFRXXXXXXXXXXXXXNF 1383
              RL++A  +++   GW   A  A+ L +M+ + M+ +   L+Q                 
Sbjct:  1919 CRLVQACVDVLSSNGWLSPAIHAMELSQMLTQAMYSNEPYLKQLPHCSAALLERAKAKEV 1978

Query:  1384 PWE-RLYDLGPNEIGELIRVPKLGKT-IHKYVHQFPKLELATHIQ-PITRSTLRVELTIS 1440
                  L +L  ++  +++++       + ++ + +P +E+AT ++  +  S   + L +S
Sbjct:  1979 TSVFELLELENDDRSDILQMEGAELADVARFCNHYPSIEVATELENDVVTSNDNLMLAVS 2038

Query:  1441 PDFQWDEKLHG--------------GSEGFWILVEDVDSEAIRLIQACVDVLSSNGWLSP 1486
                + D  + G                EG+W+++ D +S A+  I+  V  ++    +  
Sbjct:  2039 --LERDNDIDGLAPPVVAPLFPQKRKEEGWWLVIGDSESNALLTIKRLV--INEKSSVQL 2094

Query:  1487 AVAAMEVAQMITQAMWSKDSYLKQLPHFNADIIKRCTEKG 1526
               AA        +  +  DSYL     F  D+  +  E G
Sbjct:  2095 DFAAPRPGHHKFKLFFISDSYLGADQEF--DVAFKVEEPG 2132

 Score = 385 (140.6 bits), Expect = 2.7e-282, Sum P(5) = 2.7e-282
 Identities = 61/92 (66%), Positives = 82/92 (89%)

Query:   668 STLRVELTISPDFQWDEKLHGGSEGFWILVEDVDSEVVLHHEYFLLKSRYATDDHVVKFF 727
             +T+R+ELTI+PDF+WDEK+HG +EGFWI +ED D E +LHHE+FLLK ++ +D+HVVK  
Sbjct:  1189 TTMRIELTITPDFKWDEKVHGSAEGFWIFIEDTDGEKILHHEFFLLKQKFCSDEHVVKMI 1248

Query:   728 VPVFEPLPPQYFLRIVSDRWIGAETILPVSFR 759
             VP+F+P+PP Y++RIVSDRWIGAET+LP+SFR
Sbjct:  1249 VPMFDPMPPLYYVRIVSDRWIGAETVLPISFR 1280

 Score = 210 (79.0 bits), Expect = 0., Sum P(5) = 0.
 Identities = 39/54 (72%), Positives = 46/54 (85%)

Query:   761 PRGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNFGK 814
             P GAGKTNVALL MLQEIG H+  DG++  DEFKI+Y+APM+SLVQEMVG+F K
Sbjct:   498 PTGAGKTNVALLTMLQEIGNHLAEDGSVKLDEFKIVYIAPMKSLVQEMVGSFSK 551

 Score = 207 (77.9 bits), Expect = 2.7e-282, Sum P(5) = 2.7e-282
 Identities = 72/232 (31%), Positives = 109/232 (46%)

Query:   802 RSLVQEMVGNFGKDEIHLLHDERGPVLEALIARTIRNIEATQED-VRLVGLSATLPNYKD 860
             R  VQ  V  F  D++H++    G V E + +RT R I +  E  VR+V LS++L N +D
Sbjct:  1436 RKSVQN-VKLFIADDLHMIGASNGAVFEVVCSRT-RYISSQLESAVRVVALSSSLTNARD 1493

Query:   861 VATLLRIKPETGLFYFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQ 920
             +   L     +  F F  S RPV L+ +           RF  M   VY+ +  HAG+ +
Sbjct:  1494 LGMWLGCSA-SATFNFMPSTRPVPLDLEIKSFNLSHNASRFAAMERPVYQAICRHAGKLE 1552

Query:   921 ---LLVFVHSRKETGKTARAIRDMCLEKDTLGQFLR--EGSASMEVLRTEADQVKNGELR 975
                 LVFV  R++T   A A+  M L      +FLR  E   + + L   AD +++  LR
Sbjct:  1553 PKPALVFVPVRRQTRPVAVALLTMALADGAPKRFLRLAEHDDTFQALL--AD-IEDESLR 1609

Query:   976 DLLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
             + +  G    H G    D  +V+ LF    IQV V    + + + + A+ VV
Sbjct:  1610 ESVSCGVGFLHEGTAPKDVHIVQQLFESNAIQVCVVPRGMCYQIEMSAYLVV 1661

 Score = 129 (50.5 bits), Expect = 1.9e-73, Sum P(3) = 1.9e-73
 Identities = 33/112 (29%), Positives = 58/112 (51%)

Query:   453 PKPMGPDETLVPIDKLP------RYVQHAFED--FKTLNRIQSRLCKSALESDENLLLCA 504
             P+   P   L+ +  LP      +  Q  F +  FK  N IQ+++ ++  ES+EN+++CA
Sbjct:  1285 PEKYPPPTELLDLQPLPISAVTNKEFQTVFAESGFKVFNPIQTQVFRTVFESNENVIVCA 1344

Query:   505 PTGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNF 556
             P G+GKT +A L +L    +H       N  E K +Y+ PM  +  ++  ++
Sbjct:  1345 PNGSGKTAIAELAVL----RHFE-----NTPEAKAVYITPMEDMATKVYADW 1387

 Score = 126 (49.4 bits), Expect = 5.9e-193, Sum P(3) = 5.9e-193
 Identities = 39/118 (33%), Positives = 57/118 (48%)

Query:   546 RSLVQEMVGNFGKDEIHLLHDERGPVLEALIARTIRNIEATQED-VRLVGLSATLPNYKD 604
             R  VQ  V  F  D++H++    G V E + +RT R I +  E  VR+V LS++L N +D
Sbjct:  1436 RKSVQN-VKLFIADDLHMIGASNGAVFEVVCSRT-RYISSQLESAVRVVALSSSLTNARD 1493

Query:   605 VATLLRIKPETGLFYFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGR 662
             +   L     +  F F  S RPV L+ +           RF  M   VY+ +  HAG+
Sbjct:  1494 LGMWLGCSA-SATFNFMPSTRPVPLDLEIKSFNLSHNASRFAAMERPVYQAICRHAGK 1550

 Score = 93 (37.8 bits), Expect = 4.1e-243, Sum P(4) = 4.1e-243
 Identities = 41/219 (18%), Positives = 84/219 (38%)

Query:  1454 EGFWILVEDV--DSEAIRLIQACVDVLSSNGWLSPAVAAMEVAQMITQAMWSKDSYLKQL 1511
             EGF +  + V     A RL +A  +++   GW   A   + + +M+TQ  W   + L Q 
Sbjct:  1066 EGFALQADMVFVAQSAGRLFRALFEIVLWRGWAGLAQKVLTLCKMVTQRQWGSLNPLHQF 1125

Query:  1512 PHFNADIIKRCTEKGVETVFDIMXXXXXXXXXXXXXXXXXXADVARFCNRYPNIELSYEV 1571
                 +++++   +K     FD +                    + +F  ++P +E++  +
Sbjct:  1126 KKIPSEVVRSIDKKNYS--FDRLYDLDQHQLGDLIKMPKMGKPLFKFIRQFPKLEMTTLI 1183

Query:  1572 LNKDRIXXXXXXXXXXXLDREDEVTGPVIAPFYPQKREEGWWVVIGDPKTNSLLSIKRLT 1631
                 R               +++V G            EG+W+ I D     +L  +   
Sbjct:  1184 QPITRTTMRIELTITPDFKWDEKVHGSA----------EGFWIFIEDTDGEKILHHEFFL 1233

Query:  1632 LQQKA---KIKLDFVAP--NPGHHSYALYFMSDAYLGCD 1665
             L+QK    +  +  + P  +P    Y +  +SD ++G +
Sbjct:  1234 LKQKFCSDEHVVKMIVPMFDPMPPLYYVRIVSDRWIGAE 1272

 Score = 69 (29.3 bits), Expect = 2.8e-172, Sum P(3) = 2.8e-172
 Identities = 18/78 (23%), Positives = 41/78 (52%)

Query:   691 EGFWILVEDVDSEVVLHHEYFLLKSRYATDDHVVKFFVPVFEPLPPQYFLRIVSDRWIGA 750
             EG+W+++ D +S  +L  +  ++  + +     + F  P   P   ++ L  +SD ++GA
Sbjct:  2064 EGWWLVIGDSESNALLTIKRLVINEKSSVQ---LDFAAP--RPGHHKFKLFFISDSYLGA 2118

Query:   751 ETILPVSFRLPRGAGKTN 768
             +    V+F++    G++N
Sbjct:  2119 DQEFDVAFKVEE-PGRSN 2135

 Score = 66 (28.3 bits), Expect = 1.1e-248, Sum P(5) = 1.1e-248
 Identities = 21/83 (25%), Positives = 37/83 (44%)

Query:   730 VFEPLPPQYFLRIVSDRWIGAETILPVSFRLPRGAGKTNVALLCMLQEIGKHINADGTIN 789
             VF P+  Q F  +        E ++  +   P G+GKT +A L +L    +H       N
Sbjct:  1321 VFNPIQTQVFRTVFESN----ENVIVCA---PNGSGKTAIAELAVL----RHFE-----N 1364

Query:   790 ADEFKIIYVAPMRSLVQEMVGNF 812
               E K +Y+ PM  +  ++  ++
Sbjct:  1365 TPEAKAVYITPMEDMATKVYADW 1387

 Score = 39 (18.8 bits), Expect = 7.4e-246, Sum P(5) = 7.4e-246
 Identities = 7/25 (28%), Positives = 13/25 (52%)

Query:   754 LPVSFRLPRGAGKTNVALLCMLQEI 778
             +P+   L   + KTNV L   + ++
Sbjct:  1039 IPIKENLDEASAKTNVLLQAYISQL 1063

 Score = 38 (18.4 bits), Expect = 0., Sum P(5) = 0.
 Identities = 6/18 (33%), Positives = 11/18 (61%)

Query:  1513 HFNADIIKRCTEKGVETV 1530
             HFNA+I+ +  E   + +
Sbjct:  1734 HFNAEIVTKTIENKQDAI 1751

 Score = 38 (18.4 bits), Expect = 0., Sum P(4) = 0.
 Identities = 8/29 (27%), Positives = 15/29 (51%)

Query:   637 TEKKALKRFQVMNDIVYEKVMEHAGRNQL 665
             TE +  K   + + + Y   + HAG N++
Sbjct:   757 TEAEQAKNLDLKDLLPYGFAIHHAGMNRV 785


>TAIR|locus:2037375 [details] [associations]
            symbol:emb1507 "embryo defective 1507" species:3702
            "Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
            [GO:0009793 "embryo development ending in seed dormancy"
            evidence=NAS] [GO:0017111 "nucleoside-triphosphatase activity"
            evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0016020
            "membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
            [GO:0006259 "DNA metabolic process" evidence=RCA] [GO:0007126
            "meiosis" evidence=RCA] [GO:0009165 "nucleotide biosynthetic
            process" evidence=RCA] [GO:0033044 "regulation of chromosome
            organization" evidence=RCA] InterPro:IPR001650 InterPro:IPR003593
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00382 SMART:SM00490 EMBL:CP002684 GO:GO:0005829
            GO:GO:0005524 GO:GO:0005730 GO:GO:0016020 GO:GO:0003676
            GO:GO:0030529 EMBL:AC007369 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889 SMART:SM00611
            SMART:SM00973 HOGENOM:HOG000157749 KO:K12854 OMA:KWDVLSR
            GO:GO:0008026 ProtClustDB:CLSN2679454 IPI:IPI00536616 PIR:E86342
            RefSeq:NP_001185050.1 RefSeq:NP_173520.1 UniGene:At.11196
            UniGene:At.21273 ProteinModelPortal:Q9SYP1 SMR:Q9SYP1 IntAct:Q9SYP1
            STRING:Q9SYP1 PRIDE:Q9SYP1 ProMEX:Q9SYP1 EnsemblPlants:AT1G20960.1
            EnsemblPlants:AT1G20960.2 GeneID:838690 KEGG:ath:AT1G20960
            TAIR:At1g20960 InParanoid:Q9SYP1 PhylomeDB:Q9SYP1
            Genevestigator:Q9SYP1 Uniprot:Q9SYP1
        Length = 2171

 Score = 1536 (545.8 bits), Expect = 0., Sum P(4) = 0.
 Identities = 287/441 (65%), Positives = 351/441 (79%)

Query:  1028 DRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQM 1087
             DR +VE LF+  H+QVLVSTATLAWGVNLPAHTVIIKGTQ+YNPEKG W+EL  LDV+QM
Sbjct:   817 DREIVETLFSQGHVQVLVSTATLAWGVNLPAHTVIIKGTQVYNPEKGAWMELSPLDVMQM 876

Query:  1088 LGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMISKLPDMLNAEIVLGTVQN 1147
             LGRAGRPQYD  GEG++IT +SELQYYLSL+N QLP+ESQ ISKL D LNAEIVLGTVQN
Sbjct:   877 LGRAGRPQYDQHGEGIIITGYSELQYYLSLMNEQLPIESQFISKLADQLNAEIVLGTVQN 936

Query:  1148 LKDAVTWLGYTYLYIRMLRAPNLYGISHDALKEDPLLECHRADLIHTAALHLERSGLIKY 1207
              ++A  WLGYTYLYIRM+R P LYG++ DAL +D +LE  RADLIH+AA  L+++ L+KY
Sbjct:   937 AREACHWLGYTYLYIRMVRNPTLYGLAPDALAKDVVLEERRADLIHSAATILDKNNLVKY 996

Query:  1208 DRKSGHMQVTELGRIASHYYCTHETMATYNQLLKPTLSEIELFRVFSLSGEFRHITVRXX 1267
             DRKSG+ QVT+LGRIAS+YY TH T+ATYN+ LKPT+ +I+L+R+FSLS EF+++TVR  
Sbjct:   997 DRKSGYFQVTDLGRIASYYYITHGTIATYNEHLKPTMGDIDLYRLFSLSDEFKYVTVRQD 1056

Query:  1268 XXXXXXXXXXRAPIPIKESTDEPSAKVNILLQAYISQLKLEGFALMSDMVFVTQSAARLM 1327
                       R PIPIKE+ +EPSAK+N+LLQAYISQLKLEG +L SDMV++TQSA RL+
Sbjct:  1057 EKMELAKLLDRVPIPIKETLEEPSAKINVLLQAYISQLKLEGLSLTSDMVYITQSAGRLV 1116

Query:  1328 RAIFEIVLYRGWAQLADKALSLCKMVDRRMWQSMSPLRQFRXXXXXXXXXXXXXNFPWER 1387
             RA++EIVL RGWAQLA+KAL+L KMV +RMW   +PLRQF              +  WER
Sbjct:  1117 RALYEIVLKRGWAQLAEKALNLSKMVGKRMWSVQTPLRQFHGLSNDILMQLEKKDLVWER 1176

Query:  1388 LYDLGPNEIGELIRVPKLGKTIHKYVHQFPKLELATHIQPITRSTLRVELTISPDFQWDE 1447
              YDL   E+GELIR PK+GK +HK++HQFPK+ L+ H+QPITR+ L VELT++PDF WDE
Sbjct:  1177 YYDLSAQELGELIRSPKMGKPLHKFIHQFPKVTLSAHVQPITRTVLNVELTVTPDFLWDE 1236

Query:  1448 KLHGGSEGFWILVEDVDSEAI 1468
             K+H   E FWI+VED D E I
Sbjct:  1237 KIHKYVEPFWIIVEDNDGEKI 1257

 Score = 851 (304.6 bits), Expect = 0., Sum P(4) = 0.
 Identities = 226/615 (36%), Positives = 326/615 (53%)

Query:     2 ADAAARQLQYEYKANSNLVLQADVRLIERRSRDEATGEVCSLVGKLEGTRMGDRFMRTKP 61
             A+A AR  QYEY+ANS+LVL  D R    R   E TGE  +L GK++    GDR  + +P
Sbjct:     8 AEAHARFKQYEYRANSSLVLTTDNR---PRDTHEPTGEPETLWGKIDPRSFGDRVAKGRP 64

Query:    62 IKAEER--KVKRQKRD--EAQYDFTRMKGATLLSEGV-DEMVGIIYRPKTQETRQTYEVL 116
              + E++  K K+++RD  +   +  + K   L  E V  +    +Y+PKT+ETR  YE +
Sbjct:    65 QELEDKLKKSKKKERDVVDDMVNIRQSKRRRLREESVLTDTDDAVYQPKTKETRAAYEAM 124

Query:   117 LSFIQEALGDQPRDILCGAADEVLTVLKNDRMXXXXXXXXTENLLGSLAEERFALLVNLG 176
             L  IQ+ LG QP  I+ GAADE+L VLKND           E LL  +    F  LV++G
Sbjct:   125 LGLIQKQLGGQPPSIVSGAADEILAVLKNDAFRNPEKKMEIEKLLNKIENHEFDQLVSIG 184

Query:   177 KKITDF--GAEQKSTTA--EENIDDTYGINVQFXXXXXXXXXXTFXXXXXXXXXXXXXXX 232
             K ITDF  G +     A  +E +DD  G+ V+F                           
Sbjct:   185 KLITDFQEGGDSGGGRANDDEGLDDDLGVAVEFEENEEDDEESDPDMVEEDDDEEDDEPT 244

Query:   233 XXXNTAIHAENLAGGEDAEGTGRKKDKSLHPLDIDAYWLQRRLSKIYD---DAMVSQAKA 289
                   + A    G  D +     +  +L+  DIDAYWLQR++S+ Y+   D    Q  A
Sbjct:   245 RTGGMQVDA----GINDEDAGDANEGTNLNVQDIDAYWLQRKISQAYEQQIDPQQCQVLA 300

Query:   290 GEVLNILKSAGDDRDAENQLVLLLGYDCFDFIKMLKKYRQMILYCTLLASSQSESERQKL 349
              E+L IL + GDDR  E++L++ L Y+ F  +K L + R  +++CT LA ++ + ER ++
Sbjct:   301 EELLKIL-AEGDDRVVEDKLLMHLQYEKFSLVKFLLRNRLKVVWCTRLARAEDQEERNRI 359

Query:   350 RDTMSE-DPALAKILRQLD----TGKNEDGDANDSA--DARQ------STSIRHQMXXXX 396
              + M    P L  I+ QL     T K  + +   S   +AR+          R +     
Sbjct:   360 EEEMRGLGPELTAIVEQLHATRATAKEREENLQKSINEEARRLKDETGGDGGRGRRDVAD 419

Query:   397 XXXXXX-XXXTRQVLDLEDLQFSSGSHFMSNKRCELPDGSFRKQRKGYEEVHVPALKPKP 455
                        RQ+LDLE L F  G   M+NK+C+LP GS+R   KGY+EVHVP +  K 
Sbjct:   420 RDSESGWVKGQRQMLDLESLAFDQGGLLMANKKCDLPPGSYRSHGKGYDEVHVPWVSKK- 478

Query:   456 MGPDETLVPIDKLPRYVQHAFEDFKTLNRIQSRLCKSALESDENLLLCAPTGAGKTNVAL 515
             +  +E LV I ++P + Q AF+  + LNR+QS++  +AL   EN+LLCAPTGAGKTNVA+
Sbjct:   479 VDRNEKLVKITEMPDWAQPAFKGMQQLNRVQSKVYDTALFKAENILLCAPTGAGKTNVAM 538

Query:   516 LCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNFGKDEIHLLHDERGPVLEAL 575
             L +LQ++  + N DGT N  ++KI+YVAPM++LV E+VGN      + L D  G ++  L
Sbjct:   539 LTILQQLEMNRNTDGTYNHGDYKIVYVAPMKALVAEVVGNLS----NRLKDY-GVIVREL 593

Query:   576 I---ARTIRNIEATQ 587
                 + T R IE TQ
Sbjct:   594 SGDQSLTGREIEETQ 608

 Score = 756 (271.2 bits), Expect = 0., Sum P(4) = 0.
 Identities = 140/213 (65%), Positives = 177/213 (83%)

Query:   815 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 874
             DEIHLLHD RGPVLE+++ART+R IE T+E++RLVGLSATLPNY+DVA  LR+  + GLF
Sbjct:   639 DEIHLLHDNRGPVLESIVARTLRQIETTKENIRLVGLSATLPNYEDVALFLRVDLKKGLF 698

Query:   875 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQLLVFVHSRKETGKT 934
              FD S+RPV L QQYIG++ KK L+RFQ+MND+ Y+KV+  AG++Q+L+FVHSRKET KT
Sbjct:   699 KFDRSYRPVPLHQQYIGISVKKPLQRFQLMNDLCYQKVLAGAGKHQVLIFVHSRKETSKT 758

Query:   935 ARAIRDMCLEKDTLGQFLREGSASMEVLRTEADQVKNGELRDLLPYGFAIHHAGMTRVDR 994
             ARAIRD  +  DTL +FL+E S + +VL +  D VKN +L+D+LPYGFAIHHAG++R DR
Sbjct:   759 ARAIRDTAMANDTLSRFLKEDSVTRDVLHSHEDIVKNSDLKDILPYGFAIHHAGLSRGDR 818

Query:   995 TLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
              +VE LF+  H+QVLVSTATLAWGVNLPAHTV+
Sbjct:   819 EIVETLFSQGHVQVLVSTATLAWGVNLPAHTVI 851

 Score = 590 (212.7 bits), Expect = 0., Sum P(4) = 0.
 Identities = 114/220 (51%), Positives = 148/220 (67%)

Query:  1462 DVDSEAIRLIQACVDVLSSNGWLSPAVAAMEVAQMITQAMWSKDSYLKQLPHFNADIIKR 1521
             DV   A RL+QA VDV+SSNGWL+ A+ AMEV+QM+TQ MW +DS L QLPHF  D+ KR
Sbjct:  1941 DVLLSATRLLQAMVDVISSNGWLNLALLAMEVSQMVTQGMWERDSMLLQLPHFTKDLAKR 2000

Query:  1522 CTE---KGVETVFDIMXXXXXXXXXXXXXXXXXXADVARFCNRYPNIELSYEVLNKDRIX 1578
             C E   K +ETVFD++                   D+ARFCNR+PNI+L+YE++  + + 
Sbjct:  2001 CQENPGKNIETVFDLVEMEDEERQELLKMSDAQLLDIARFCNRFPNIDLTYEIVGSEEVN 2060

Query:  1579 XXXXXXXXXXLDREDE---VTGPVIAPFYPQKREEGWWVVIGDPKTNSLLSIKRLTLQQK 1635
                       L+R+ E     GPV +  YP+ +EEGWW+V+GD KTN LL+IKR++LQ+K
Sbjct:  2061 PGKEVTLQVMLERDMEGRTEVGPVDSLRYPKTKEEGWWLVVGDTKTNQLLAIKRVSLQRK 2120

Query:  1636 AKIKLDFVAPN-PGHHSYALYFMSDAYLGCDQEYKFSIDV 1674
              K+KLDF AP+ PG  SY LYFM D+YLGCDQEY FS+DV
Sbjct:  2121 VKVKLDFTAPSEPGEKSYTLYFMCDSYLGCDQEYSFSVDV 2160

 Score = 456 (165.6 bits), Expect = 8.9e-215, Sum P(6) = 8.9e-215
 Identities = 137/471 (29%), Positives = 223/471 (47%)

Query:  1027 VDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQ 1086
             +D+ +V  LF    IQV V +++L WG  L AH V++ GTQ Y+  +    +    D+LQ
Sbjct:  1654 LDQEIVTQLFEAGRIQVCVMSSSLCWGTPLTAHLVVVMGTQYYDGRENSHSDYPVPDLLQ 1713

Query:  1087 MLGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMISKLPDMLNAEIVLGTVQ 1146
             M+GRA RP  D  G+ V+  +    +YY   L    PVESQ+   L D  NAE+V G ++
Sbjct:  1714 MMGRASRPLLDNAGKCVIFCHAPRKEYYKKFLYEAFPVESQLQHFLHDNFNAEVVAGVIE 1773

Query:  1147 NLKDAVTWLGYTYLYIRMLRAPNLY---GISHDALKEDPLLECHRADLIHTAALHLERSG 1203
             N +DAV +L +T++Y R+ + PN Y   G+SH  L +      H ++L+      LE S 
Sbjct:  1774 NKQDAVDYLTWTFMYRRLPQNPNYYNLQGVSHRHLSD------HLSELVENTLSDLEASK 1827

Query:  1204 LIKYDRKSGHMQVTELGRIASHYYCTHETMATYNQLLKPTLSEIELFRVFSLSGEFRHIT 1263
              I+ + +   +    LG IAS+YY ++ T+  ++ LL        L  + + + E+  I 
Sbjct:  1828 CIEVEDEM-ELSPLNLGMIASYYYISYTTIERFSSLLSSKTKMKGLLEILTSASEYDMIP 1886

Query:  1264 VR--XXXXXXXXXXXXRAPIPIKESTDEPSAKVNILLQAYISQLKLEGFALMSDMVFVTQ 1321
             +R              R      + TD P  K N LLQA+ S+  + G   M D   V  
Sbjct:  1887 IRPGEEDTVRRLINHQRFSFENPKCTD-PHVKANALLQAHFSRQNIGGNLAM-DQRDVLL 1944

Query:  1322 SAARLMRAIFEIVLYRGWAQLADKALSLCKMVDRRMWQSMSPLRQ---FRXXXXXXXXXX 1378
             SA RL++A+ +++   GW  LA  A+ + +MV + MW+  S L Q   F           
Sbjct:  1945 SATRLLQAMVDVISSNGWLNLALLAMEVSQMVTQGMWERDSMLLQLPHFTKDLAKRCQEN 2004

Query:  1379 XXXNFPWERLYDLGPNEIGELIRVPKLGKT----IHKYVHQFPKLEL------ATHIQPI 1428
                N   E ++DL   E  E   + K+       I ++ ++FP ++L      +  + P 
Sbjct:  2005 PGKNI--ETVFDLVEMEDEERQELLKMSDAQLLDIARFCNRFPNIDLTYEIVGSEEVNPG 2062

Query:  1429 TRSTLRVELTISPDFQWD----EKLH---GGSEGFWILVEDVDSEAIRLIQ 1472
                TL+V L    + + +    + L       EG+W++V D  +  +  I+
Sbjct:  2063 KEVTLQVMLERDMEGRTEVGPVDSLRYPKTKEEGWWLVVGDTKTNQLLAIK 2113

 Score = 382 (139.5 bits), Expect = 0., Sum P(4) = 0.
 Identities = 70/109 (64%), Positives = 92/109 (84%)

Query:   559 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 618
             DEIHLLHD RGPVLE+++ART+R IE T+E++RLVGLSATLPNY+DVA  LR+  + GLF
Sbjct:   639 DEIHLLHDNRGPVLESIVARTLRQIETTKENIRLVGLSATLPNYEDVALFLRVDLKKGLF 698

Query:   619 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQLLV 667
              FD S+RPV L QQYIG++ KK L+RFQ+MND+ Y+KV+  AG++Q+L+
Sbjct:   699 KFDRSYRPVPLHQQYIGISVKKPLQRFQLMNDLCYQKVLAGAGKHQVLI 747

 Score = 359 (131.4 bits), Expect = 7.6e-229, Sum P(6) = 7.6e-229
 Identities = 63/107 (58%), Positives = 81/107 (75%)

Query:   653 YEKVMEHAGRNQLLVSTLRVELTISPDFQWDEKLHGGSEGFWILVEDVDSEVVLHHEYFL 712
             + KV   A    +  + L VELT++PDF WDEK+H   E FWI+VED D E +LHHEYFL
Sbjct:  1205 FPKVTLSAHVQPITRTVLNVELTVTPDFLWDEKIHKYVEPFWIIVEDNDGEKILHHEYFL 1264

Query:   713 LKSRYATDDHVVKFFVPVFEPLPPQYFLRIVSDRWIGAETILPVSFR 759
             LK +Y  +DH + F VP+FEPLPPQYF+R+VSD+W+G+ET+LPVSFR
Sbjct:  1265 LKKQYIDEDHTLHFTVPIFEPLPPQYFVRVVSDKWLGSETVLPVSFR 1311

 Score = 264 (98.0 bits), Expect = 7.6e-229, Sum P(6) = 7.6e-229
 Identities = 75/229 (32%), Positives = 113/229 (49%)

Query:   802 RSLVQEMVGNFGKDEIHLLHDERGPVLEALIARTIRNIEATQ-EDVRLVGLSATLPNYKD 860
             R  VQ+ V  F  DE+HL+  + GPVLE +++R +R I +     +R+V LS +L N KD
Sbjct:  1467 RKYVQQ-VSLFIVDELHLIGGQHGPVLEVIVSR-MRYISSQVINKIRIVALSTSLANAKD 1524

Query:   861 VATLLRIKPETGLFYFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHA-GRN 919
             +   +      GLF F    RPV LE    GV       R Q M    Y  +++HA  + 
Sbjct:  1525 LGEWIGASSH-GLFNFPPGVRPVPLEIHIQGVDISSFEARMQAMTKPTYTAIVQHAKNKK 1583

Query:   920 QLLVFVHSRKETGKTARAIRDMC-LEKDTLGQFLREGSASMEVLRTEADQVKNGELRDLL 978
               +VFV +RK    TA  +     ++      FL      +E L    +Q++   L++ L
Sbjct:  1584 PAIVFVPTRKHVRLTAVDLMAYSHMDNPQSPDFLL---GKLEELDPFVEQIREETLKETL 1640

Query:   979 PYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
              +G    H G++ +D+ +V  LF    IQV V +++L WG  L AH VV
Sbjct:  1641 CHGIGYLHEGLSSLDQEIVTQLFEAGRIQVCVMSSSLCWGTPLTAHLVV 1689

 Score = 164 (62.8 bits), Expect = 5.7e-310, Sum P(4) = 5.7e-310
 Identities = 44/97 (45%), Positives = 61/97 (62%)

Query:   750 AETILPVSFRLPRGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMV 809
             AE IL  +   P GAGKTNVA+L +LQ++  + N DGT N  ++KI+YVAPM++LV E+V
Sbjct:   520 AENILLCA---PTGAGKTNVAMLTILQQLEMNRNTDGTYNHGDYKIVYVAPMKALVAEVV 576

Query:   810 GNFG---KDEIHLLHDERGPVLEALIARTIRNIEATQ 843
             GN     KD   ++ +  G   ++L   T R IE TQ
Sbjct:   577 GNLSNRLKDYGVIVRELSGD--QSL---TGREIEETQ 608

 Score = 152 (58.6 bits), Expect = 1.9e-147, Sum P(3) = 1.9e-147
 Identities = 42/116 (36%), Positives = 59/116 (50%)

Query:   546 RSLVQEMVGNFGKDEIHLLHDERGPVLEALIARTIRNIEATQ-EDVRLVGLSATLPNYKD 604
             R  VQ+ V  F  DE+HL+  + GPVLE +++R +R I +     +R+V LS +L N KD
Sbjct:  1467 RKYVQQ-VSLFIVDELHLIGGQHGPVLEVIVSR-MRYISSQVINKIRIVALSTSLANAKD 1524

Query:   605 VATLLRIKPETGLFYFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHA 660
             +   +      GLF F    RPV LE    GV       R Q M    Y  +++HA
Sbjct:  1525 LGEWIGASSH-GLFNFPPGVRPVPLEIHIQGVDISSFEARMQAMTKPTYTAIVQHA 1579

 Score = 126 (49.4 bits), Expect = 8.6e-82, Sum P(3) = 8.6e-82
 Identities = 35/123 (28%), Positives = 64/123 (52%)

Query:   443 YEEVHVPALKPKPMGP-DETLVPIDKL--PRYVQHAFEDFKTLNRIQSRLCKSALESDEN 499
             +  + +P   P P    D   +P+  L  P Y +  ++DFK  N +Q+++      +++N
Sbjct:  1310 FRHLILPEKYPPPTELLDLQPLPVTALRNPNY-EILYQDFKHFNPVQTQVFTVLYNTNDN 1368

Query:   500 LLLCAPTGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMV----GN 555
             +L+ APTG+GKT  A   +L+    H   D T+     +++Y+AP+ ++ +E      G 
Sbjct:  1369 VLVAAPTGSGKTICAEFAILRN--HHEGPDATM-----RVVYIAPLEAIAKEQFRIWEGK 1421

Query:   556 FGK 558
             FGK
Sbjct:  1422 FGK 1424

 Score = 101 (40.6 bits), Expect = 1.5e-159, Sum P(3) = 1.5e-159
 Identities = 43/208 (20%), Positives = 85/208 (40%)

Query:  1463 VDSEAIRLIQACVDVLSSNGWLSPAVAAMEVAQMITQAMWSKDSYLKQLPHFNADIIKRC 1522
             +   A RL++A  +++   GW   A  A+ +++M+ + MWS  + L+Q    + DI+ + 
Sbjct:  1108 ITQSAGRLVRALYEIVLKRGWAQLAEKALNLSKMVGKRMWSVQTPLRQFHGLSNDILMQL 1167

Query:  1523 TEKGVETVFDIMXXXXXXXXXXXXXXXXXXADVARFCNRYPNIELSYEVLNKDRIXXXXX 1582
              +K  + V++                      + +F +++P + LS  V    R      
Sbjct:  1168 EKK--DLVWERYYDLSAQELGELIRSPKMGKPLHKFIHQFPKVTLSAHVQPITR------ 1219

Query:  1583 XXXXXXLDREDEVTGPVIAPFYPQKREEGWWVVIGDPKTNSLLSIKRLTLQQK---AKIK 1639
                   L+ E  VT   +      K  E +W+++ D     +L  +   L+++       
Sbjct:  1220 ----TVLNVELTVTPDFLWDEKIHKYVEPFWIIVEDNDGEKILHHEYFLLKKQYIDEDHT 1275

Query:  1640 LDFVAP--NPGHHSYALYFMSDAYLGCD 1665
             L F  P   P    Y +  +SD +LG +
Sbjct:  1276 LHFTVPIFEPLPPQYFVRVVSDKWLGSE 1303

 Score = 66 (28.3 bits), Expect = 7.6e-229, Sum P(6) = 7.6e-229
 Identities = 18/58 (31%), Positives = 30/58 (51%)

Query:   761 PRGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMV----GNFGK 814
             P G+GKT  A   +L+    H   D T+     +++Y+AP+ ++ +E      G FGK
Sbjct:  1374 PTGSGKTICAEFAILRN--HHEGPDATM-----RVVYIAPLEAIAKEQFRIWEGKFGK 1424

 Score = 51 (23.0 bits), Expect = 3.4e-80, Sum P(2) = 3.4e-80
 Identities = 35/147 (23%), Positives = 61/147 (41%)

Query:   620 FDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQL-LVSTLRVELTISP 678
             F N F  + L  + +G  E    K  +V   ++ E+ ME  GR ++  V +LR   T   
Sbjct:  2040 FCNRFPNIDLTYEIVGSEEVNPGK--EVTLQVMLERDME--GRTEVGPVDSLRYPKT--- 2092

Query:   679 DFQWDEKLHGGSEGFWILVEDVDSEVVLHHEYFLLKSRYATDDHVVKFFVPVFEPLPPQY 738
                         EG+W++V D  +  +L  +   L+ +       + F  P  EP    Y
Sbjct:  2093 ----------KEEGWWLVVGDTKTNQLLAIKRVSLQRKVKVK---LDFTAPS-EPGEKSY 2138

Query:   739 FLRIVSDRWIGAETILPVSFRLPRGAG 765
              L  + D ++G +     S  + +G+G
Sbjct:  2139 TLYFMCDSYLGCDQEYSFSVDV-KGSG 2164


>TAIR|locus:2059969 [details] [associations]
            symbol:AT2G42270 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA;ISS] [GO:0017111 "nucleoside-triphosphatase
            activity" evidence=IEA] [GO:0009506 "plasmodesma" evidence=IDA]
            InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00382
            SMART:SM00490 GO:GO:0009506 GO:GO:0005524 EMBL:CP002685
            GenomeReviews:CT485783_GR GO:GO:0003676 EMBL:AC002561 GO:GO:0030529
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179
            Pfam:PF02889 SMART:SM00611 SMART:SM00973 eggNOG:COG1204
            HOGENOM:HOG000157749 UniGene:At.12448 UniGene:At.43726 KO:K12854
            OMA:RDTHESS GO:GO:0008026 IPI:IPI00539463 PIR:T00936
            RefSeq:NP_181756.1 ProteinModelPortal:O48534 SMR:O48534
            STRING:O48534 PaxDb:O48534 PRIDE:O48534 EnsemblPlants:AT2G42270.1
            GeneID:818828 KEGG:ath:AT2G42270 TAIR:At2g42270 InParanoid:O48534
            PhylomeDB:O48534 ProtClustDB:CLSN2679454 ArrayExpress:O48534
            Genevestigator:O48534 Uniprot:O48534
        Length = 2172

 Score = 1474 (523.9 bits), Expect = 0., Sum P(4) = 0.
 Identities = 277/444 (62%), Positives = 347/444 (78%)

Query:  1025 TVVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDV 1084
             T  DR +VE+ F   ++QVL+STATLAWGVNLPAHTVIIKGTQ+YNPE+G W+EL  LDV
Sbjct:   815 TRTDREIVENQFRWGNLQVLISTATLAWGVNLPAHTVIIKGTQVYNPERGEWMELSPLDV 874

Query:  1085 LQMLGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMISKLPDMLNAEIVLGT 1144
             +QM+GRAGRPQYD +GEG++IT +S+LQYYL L+N QLP+ESQ ISKL D LNAEIVLGT
Sbjct:   875 MQMIGRAGRPQYDQQGEGIIITGYSKLQYYLRLMNEQLPIESQFISKLADQLNAEIVLGT 934

Query:  1145 VQNLKDAVTWLGYTYLYIRMLRAPNLYGISHDALKEDPLLECHRADLIHTAALHLERSGL 1204
             +QN ++A  WLGYTYLY+RM+R P LYG+S DAL +D LLE  RADLIH+AA  L+++ L
Sbjct:   935 IQNAREACHWLGYTYLYVRMVRNPTLYGVSPDALAKDLLLEERRADLIHSAATILDKNNL 994

Query:  1205 IKYDRKSGHMQVTELGRIASHYYCTHETMATYNQLLKPTLSEIELFRVFSLSGEFRHITV 1264
             IKYDRKSGH QVT+LGRIAS+YY +H T+A YN+ LKPT+++IEL R+FSLS EF+++TV
Sbjct:   995 IKYDRKSGHFQVTDLGRIASYYYISHGTIAAYNENLKPTMNDIELCRLFSLSEEFKYVTV 1054

Query:  1265 RXXXXXXXXXXXXRAPIPIKESTDEPSAKVNILLQAYISQLKLEGFALMSDMVFVTQSAA 1324
             R            R PIP+KE+ ++PSAK+N+LLQ YIS+LKLEG +L SDMV++TQSA 
Sbjct:  1055 RQDEKMELAKLLDRVPIPVKETLEDPSAKINVLLQVYISKLKLEGLSLTSDMVYITQSAG 1114

Query:  1325 RLMRAIFEIVLYRGWAQLADKALSLCKMVDRRMWQSMSPLRQFRXXXXXXXXXXXXXNFP 1384
             RL+RAIFEIVL RGWAQL+ KAL+L KMV +RMW   +PL QF              +  
Sbjct:  1115 RLLRAIFEIVLKRGWAQLSQKALNLSKMVGKRMWSVQTPLWQFPGIPKEILMKLEKNDLV 1174

Query:  1385 WERLYDLGPNEIGELIRVPKLGKTIHKYVHQFPKLELATHIQPITRSTLRVELTISPDFQ 1444
             WER YDL   E+GELI  PK+G+ +HKY+HQFPKL+LA H+QPI+RS L+VELT++PDF 
Sbjct:  1175 WERYYDLSSQELGELICNPKMGRPLHKYIHQFPKLKLAAHVQPISRSVLQVELTVTPDFH 1234

Query:  1445 WDEKLHGGSEGFWILVEDVDSEAI 1468
             WD+K +   E FWI+VED D E I
Sbjct:  1235 WDDKANKYVEPFWIIVEDNDGEKI 1258

 Score = 720 (258.5 bits), Expect = 0., Sum P(4) = 0.
 Identities = 137/213 (64%), Positives = 173/213 (81%)

Query:   815 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 874
             DEIHLL D RGPVLE+++ART+R IE+T+E +RLVGLSATLPN  DVA+ LR+  + GLF
Sbjct:   640 DEIHLLDDNRGPVLESIVARTLRQIESTKEHIRLVGLSATLPNCDDVASFLRVDLKNGLF 699

Query:   875 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQLLVFVHSRKETGKT 934
              FD S+RPV L QQYIG+  KK L+RFQ+MNDI Y+KV+  AG++Q+L+FVHSRKET KT
Sbjct:   700 IFDRSYRPVPLGQQYIGINVKKPLRRFQLMNDICYQKVVAVAGKHQVLIFVHSRKETAKT 759

Query:   935 ARAIRDMCLEKDTLGQFLREGSASMEVLRTEADQVKNGELRDLLPYGFAIHHAGMTRVDR 994
             ARAIRD  +  DTL +FL+E S S E+L+  A  +KN +L++LLPYGFAIHHAG+TR DR
Sbjct:   760 ARAIRDTAMANDTLSRFLKEDSQSREILKCLAGLLKNNDLKELLPYGFAIHHAGLTRTDR 819

Query:   995 TLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
              +VE+ F   ++QVL+STATLAWGVNLPAHTV+
Sbjct:   820 EIVENQFRWGNLQVLISTATLAWGVNLPAHTVI 852

 Score = 704 (252.9 bits), Expect = 0., Sum P(4) = 0.
 Identities = 175/496 (35%), Positives = 262/496 (52%)

Query:    83 RMKGATLLSEGVDEMVGIIYRPKTQETRQTYEVLLSFIQEALGDQPRDILCGAADEVLTV 142
             R++  ++L++  D   G+ Y+PKT+ETR  +E++L  IQ+ LG QP DI+CGAADE+L V
Sbjct:    95 RLREVSVLNDTED---GV-YQPKTKETRVAFEIMLGLIQQQLGGQPLDIVCGAADEILAV 150

Query:   143 LKNDRMXXXXXXXXTENLLGSLAEERFALLVNLGKKITDF--GAEQKSTTAEENIDDTYG 200
             LKN+ +         E LL  + ++ F+  V++GK ITD+  G +  S  A E+    Y 
Sbjct:   151 LKNESVKNHEKKVEIEKLLNVITDQVFSQFVSIGKLITDYEEGGDSLSGKASEDGGLDYD 210

Query:   201 INVQFXXXXXXXXXXTFXXXXXXXXXXXXXXXXXXNTAIHAENLAGGEDAEGTGRKKDKS 260
             I V                                   +       GEDA     K+D S
Sbjct:   211 IGVALECEEDDDESDLDMVQDEKDEEDEDVVELNKTGVVQVGVAINGEDARQA--KEDTS 268

Query:   261 LHPLDIDAYWLQRRLSKIYD---DAMVSQAKAGEVLNILKSAGDDRDAENQLVLLLGYDC 317
             L+ LDIDAYWLQR++S+ Y+   DA   Q  A E+L IL + G+DRD E +L+  L ++ 
Sbjct:   269 LNVLDIDAYWLQRKISQEYEQKIDAQECQELAEELLKIL-AEGNDRDVEIKLLEHLQFEK 327

Query:   318 FDFIKMLKKYRQMILYCTLLASSQSESERQKLRDTM-SEDPALAKILRQLDTGKNEDGDA 376
             F  +K L + R  +++CT LA  + + ER ++ + M      LA I+++L   +    + 
Sbjct:   328 FSLVKFLLQNRLKVVWCTRLARGRDQEERNQIEEEMLGLGSELAAIVKELHAKRATAKER 387

Query:   377 NDSADARQSTSIRHQMXXXXXXXXXXXXXT--------------RQVLDLEDLQFSSGSH 422
              +  +       +H M                            RQV+DLE L F+ G  
Sbjct:   388 EEKREKDIKEEAQHLMDDDSGVDGDRGMRDVDDLDLENGWLKGQRQVMDLESLAFNQGGF 447

Query:   423 FMSNKRCELPDGSFRKQRKGYEEVHVPALKPKPMGPDETLVPIDKLPRYVQHAFEDFKTL 482
                N +CELPD SFR + K ++EVHVP +  K    +E LV I  LP + Q AF   + L
Sbjct:   448 TRENNKCELPDRSFRIRGKEFDEVHVPWVSKK-FDSNEKLVKISDLPEWAQPAFRGMQQL 506

Query:   483 NRIQSRLCKSALESDENLLLCAPTGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYV 542
             NR+QS++  +AL   +N+LLCAPTGAGKTNVA+L +L ++G ++N  GT N   +KI+YV
Sbjct:   507 NRVQSKVYGTALFKADNILLCAPTGAGKTNVAVLTILHQLGLNMNPGGTFNHGNYKIVYV 566

Query:   543 APMRSLVQEMVGNFGK 558
             APM++LV E+V +  +
Sbjct:   567 APMKALVAEVVDSLSQ 582

 Score = 556 (200.8 bits), Expect = 0., Sum P(4) = 0.
 Identities = 105/217 (48%), Positives = 144/217 (66%)

Query:  1467 AIRLIQACVDVLSSNGWLSPAVAAMEVAQMITQAMWSKDSYLKQLPHFNADIIKRCTEK- 1525
             A RL+QA VDV+SSNG L+ A+ AMEV+QM+TQ MW +DS L QLPHF  D+ KRC E  
Sbjct:  1947 ATRLLQAMVDVISSNGCLNLALLAMEVSQMVTQGMWDRDSMLLQLPHFTKDLAKRCHENP 2006

Query:  1526 --GVETVFDIMXXXXXXXXXXXXXXXXXXADVARFCNRYPNIELSYEVLNKDRIXXXXXX 1583
                +ET+FD++                   D+ARFCNR+PNI+L+YE++  + +      
Sbjct:  2007 GNNIETIFDLVEMEDDKRQELLQMSDAQLLDIARFCNRFPNIDLTYEIVGSNEVSPGKDI 2066

Query:  1584 XXXXXLDREDE---VTGPVIAPFYPQKREEGWWVVIGDPKTNSLLSIKRLTLQQKAKIKL 1640
                  L+R+ E     GPV AP YP+ +EEGWW+V+G+ KTN L++IKR++LQ+KA++KL
Sbjct:  2067 TLQVLLERDMEGRTEVGPVDAPRYPKTKEEGWWLVVGEAKTNQLMAIKRISLQRKAQVKL 2126

Query:  1641 DFVAPNP-GHHSYALYFMSDAYLGCDQEYKFSIDVSE 1676
             +F  P   G  SY LYFM D+YLGCDQEY F++DV +
Sbjct:  2127 EFAVPTETGEKSYTLYFMCDSYLGCDQEYSFTVDVKD 2163

 Score = 495 (179.3 bits), Expect = 0., Sum P(5) = 0.
 Identities = 142/457 (31%), Positives = 218/457 (47%)

Query:     2 ADAAARQLQYEYKANSNLVLQADVRLIERRSRDEATGEVCSLVGKLEGTRMGDRFMRTKP 61
             A+  AR  QY YK NS+LVL +D R   RR   E++GE  SL G+++    GDR +R +P
Sbjct:     9 AEEQARLKQYGYKVNSSLVLNSDER---RRDTHESSGEPESLRGRIDPKSFGDRVVRGRP 65

Query:    62 IKAEERKVKRQKRDEAQYDFT--------RMKGATLLSEGVDEMVGIIYRPKTQETRQTY 113
              + +ER  K +K+ E   D          R++  ++L++  D   G+ Y+PKT+ETR  +
Sbjct:    66 HELDERLNKSKKKKERCDDLVSARESKRVRLREVSVLNDTED---GV-YQPKTKETRVAF 121

Query:   114 EVLLSFIQEALGDQPRDILCGAADEVLTVLKNDRMXXXXXXXXTENLLGSLAEERFALLV 173
             E++L  IQ+ LG QP DI+CGAADE+L VLKN+ +         E LL  + ++ F+  V
Sbjct:   122 EIMLGLIQQQLGGQPLDIVCGAADEILAVLKNESVKNHEKKVEIEKLLNVITDQVFSQFV 181

Query:   174 NLGKKITDF--GAEQKSTTAEENIDDTYGINVQFXXXXXXXXXXTFXXXXXXXXXXXXXX 231
             ++GK ITD+  G +  S  A E+    Y I V                            
Sbjct:   182 SIGKLITDYEEGGDSLSGKASEDGGLDYDIGVALECEEDDDESDLDMVQDEKDEEDEDVV 241

Query:   232 XXXXNTAIHAENLAGGEDAEGTGRKKDKSLHPLDIDAYWLQRRLSKIYD---DAMVSQAK 288
                    +       GEDA     K+D SL+ LDIDAYWLQR++S+ Y+   DA   Q  
Sbjct:   242 ELNKTGVVQVGVAINGEDARQA--KEDTSLNVLDIDAYWLQRKISQEYEQKIDAQECQEL 299

Query:   289 AGEVLNILKSAGDDRDAENQLVLLLGYDCFDFIKMLKKYRQMILYCTLLASSQSESERQK 348
             A E+L IL + G+DRD E +L+  L ++ F  +K L + R  +++CT LA  + + ER +
Sbjct:   300 AEELLKIL-AEGNDRDVEIKLLEHLQFEKFSLVKFLLQNRLKVVWCTRLARGRDQEERNQ 358

Query:   349 LRDTM-SEDPALAKILRQLDTGKNEDGDANDSADARQSTSIRHQMXXXXXXXXXXXXXTR 407
             + + M      LA I+++L   +    +  +  +       +H M               
Sbjct:   359 IEEEMLGLGSELAAIVKELHAKRATAKEREEKREKDIKEEAQHLMDDDSGVDGDRGMRDV 418

Query:   408 QVLDLEDLQFSSGSHFMSNKRCELPDGSFRKQRKGYE 444
               LDLE+         M  +      G F ++    E
Sbjct:   419 DDLDLENGWLKGQRQVMDLESLAFNQGGFTRENNKCE 455

 Score = 411 (149.7 bits), Expect = 3.6e-184, Sum P(6) = 3.6e-184
 Identities = 121/411 (29%), Positives = 195/411 (47%)

Query:  1027 VDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQ 1086
             +D+ +V  LF    IQV V +++L WG  L AH V++ GT  Y+  +    +    ++LQ
Sbjct:  1655 LDQEIVTQLFEAGRIQVCVMSSSLCWGTPLKAHLVVVMGTHFYDGRENSHSDYPISNLLQ 1714

Query:  1087 MLGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMISKLPDMLNAEIVLGTVQ 1146
             M+GR  RP  D  G+ V+  +    +YY   L   LPVES +   L D  NAE+V   ++
Sbjct:  1715 MMGRGSRPLLDDAGKCVIFCHAPRKEYYKKFLYEALPVESHLQHFLHDNFNAEVVARVIE 1774

Query:  1147 NLKDAVTWLGYTYLYIRMLRAPNLY---GISHDALKEDPLLECHRADLIHTAALHLERSG 1203
             N +DAV +L ++++Y R+ + PN Y   G+SH  L +      H ++L+      LE S 
Sbjct:  1775 NKQDAVDYLTWSFMYRRLPQNPNYYNLLGVSHRHLSD------HLSELVENTLSDLEVSK 1828

Query:  1204 LIKYDRKSGHMQVTELGRIASHYYCTHETMATYNQLLKPTLSEIELFRVFSLSGEFRHIT 1263
              I+ D +   +    LG IAS+YY  + T+  ++ LL        L  + + + E+  I 
Sbjct:  1829 CIEIDNELD-LSPLNLGMIASYYYINYTTIERFSSLLASKTKMKGLLEILTSASEYDLIP 1887

Query:  1264 VR--XXXXXXXXXXXXRAPIPIKESTDEPSAKVNILLQAYISQLKLEGFALMSDMVFVTQ 1321
             +R              R        TD P  K + LLQA+ S+ K+ G  +M D   V  
Sbjct:  1888 IRPGEEDAVRRLINHQRFSFQNPRCTD-PRVKTSALLQAHFSRQKISGNLVM-DQCEVLL 1945

Query:  1322 SAARLMRAIFEIVLYRGWAQLADKALSLCKMVDRRMWQSMSPLRQ---FRXXXXXXXXXX 1378
             SA RL++A+ +++   G   LA  A+ + +MV + MW   S L Q   F           
Sbjct:  1946 SATRLLQAMVDVISSNGCLNLALLAMEVSQMVTQGMWDRDSMLLQLPHFTKDLAKRCHEN 2005

Query:  1379 XXXNFPWERLYDLGPNEIG---ELIRVPKLGKT-IHKYVHQFPKLELATHI 1425
                N   E ++DL   E     EL+++       I ++ ++FP ++L   I
Sbjct:  2006 PGNNI--ETIFDLVEMEDDKRQELLQMSDAQLLDIARFCNRFPNIDLTYEI 2054

 Score = 363 (132.8 bits), Expect = 3.5e-314, Sum P(4) = 3.5e-314
 Identities = 69/109 (63%), Positives = 89/109 (81%)

Query:   559 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 618
             DEIHLL D RGPVLE+++ART+R IE+T+E +RLVGLSATLPN  DVA+ LR+  + GLF
Sbjct:   640 DEIHLLDDNRGPVLESIVARTLRQIESTKEHIRLVGLSATLPNCDDVASFLRVDLKNGLF 699

Query:   619 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQLLV 667
              FD S+RPV L QQYIG+  KK L+RFQ+MNDI Y+KV+  AG++Q+L+
Sbjct:   700 IFDRSYRPVPLGQQYIGINVKKPLRRFQLMNDICYQKVVAVAGKHQVLI 748

 Score = 321 (118.1 bits), Expect = 2.2e-199, Sum P(6) = 2.2e-199
 Identities = 54/92 (58%), Positives = 71/92 (77%)

Query:   668 STLRVELTISPDFQWDEKLHGGSEGFWILVEDVDSEVVLHHEYFLLKSRYATDDHVVKFF 727
             S L+VELT++PDF WD+K +   E FWI+VED D E +LHHEYFL K R   +DH + F 
Sbjct:  1221 SVLQVELTVTPDFHWDDKANKYVEPFWIIVEDNDGEKILHHEYFLFKKRVIDEDHTLNFT 1280

Query:   728 VPVFEPLPPQYFLRIVSDRWIGAETILPVSFR 759
             VP+ EP+PPQYF+R+VSD+W+ + T+LPVSFR
Sbjct:  1281 VPISEPIPPQYFIRVVSDKWLDSPTVLPVSFR 1312

 Score = 243 (90.6 bits), Expect = 2.2e-199, Sum P(6) = 2.2e-199
 Identities = 73/229 (31%), Positives = 112/229 (48%)

Query:   802 RSLVQEMVGNFGKDEIHLLHDERGPVLEALIARTIRNIEA-TQEDVRLVGLSATLPNYKD 860
             R  +Q+ V  F  DE+HL+  + G VLE +++R +R I +     +R+V LS +L N KD
Sbjct:  1468 RKYIQQ-VSLFIVDELHLIGGQGGQVLEVIVSR-MRYISSQVGNKIRIVALSTSLANAKD 1525

Query:   861 VATLLRIKPETGLFYFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHA-GRN 919
             +   +      G+F F  + RPV LE    GV       R Q M    Y  +++HA  + 
Sbjct:  1526 LGEWIGAS-SCGVFNFPPNVRPVPLEIHIHGVDILSFEARMQAMTKPTYTAIVQHAKNKK 1584

Query:   920 QLLVFVHSRKETGKTA-RAIRDMCLEKDTLGQFLREGSASMEVLRTEADQVKNGELRDLL 978
               +VFV +RK    TA   I    ++      FL     ++E L     Q+    L++ L
Sbjct:  1585 PAIVFVPTRKHVRLTAVDLIAYSHMDNMKSPDFLL---GNLEELEPFLIQICEETLKETL 1641

Query:   979 PYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
              +G    H G++ +D+ +V  LF    IQV V +++L WG  L AH VV
Sbjct:  1642 RHGIGYLHEGLSNLDQEIVTQLFEAGRIQVCVMSSSLCWGTPLKAHLVV 1690

 Score = 146 (56.5 bits), Expect = 0., Sum P(5) = 0.
 Identities = 27/54 (50%), Positives = 40/54 (74%)

Query:   761 PRGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNFGK 814
             P GAGKTNVA+L +L ++G ++N  GT N   +KI+YVAPM++LV E+V +  +
Sbjct:   529 PTGAGKTNVAVLTILHQLGLNMNPGGTFNHGNYKIVYVAPMKALVAEVVDSLSQ 582

 Score = 138 (53.6 bits), Expect = 3.5e-126, Sum P(3) = 3.5e-126
 Identities = 39/116 (33%), Positives = 59/116 (50%)

Query:   546 RSLVQEMVGNFGKDEIHLLHDERGPVLEALIARTIRNIEA-TQEDVRLVGLSATLPNYKD 604
             R  +Q+ V  F  DE+HL+  + G VLE +++R +R I +     +R+V LS +L N KD
Sbjct:  1468 RKYIQQ-VSLFIVDELHLIGGQGGQVLEVIVSR-MRYISSQVGNKIRIVALSTSLANAKD 1525

Query:   605 VATLLRIKPETGLFYFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHA 660
             +   +      G+F F  + RPV LE    GV       R Q M    Y  +++HA
Sbjct:  1526 LGEWIGAS-SCGVFNFPPNVRPVPLEIHIHGVDILSFEARMQAMTKPTYTAIVQHA 1580

 Score = 112 (44.5 bits), Expect = 7.7e-121, Sum P(4) = 7.7e-121
 Identities = 31/119 (26%), Positives = 64/119 (53%)

Query:   443 YEEVHVPALKPKPMGP-DETLVPIDKL--PRYVQHAFEDFKTLNRIQSRLCKSALESDEN 499
             +  + +P   P P    D   +P+  L  P Y +  ++DFK  N +Q+++      + +N
Sbjct:  1311 FRHLILPEKYPPPTELLDLQPLPVMALRNPSY-ETLYQDFKHFNPVQTQVFTVLYNTSDN 1369

Query:   500 LLLCAPTGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNFGK 558
             +++ APTG+GKT  A   +L+    H+  +G  +A   +++Y+AP+ ++ +E   ++ K
Sbjct:  1370 VVVAAPTGSGKTICAEFAILRN---HL--EGPDSA--MRVVYIAPLEAIAKEQFRDWEK 1421

 Score = 88 (36.0 bits), Expect = 3.0e-138, Sum P(3) = 3.0e-138
 Identities = 43/152 (28%), Positives = 72/152 (47%)

Query:  1394 NEIGELIRVPKLGKTIHKYV--HQFPKLELATHIQ--PI-TRSTLR-VELTISPDFQ-WD 1446
             N+I EL R+  L +   KYV   Q  K+ELA  +   PI  + TL      I+   Q + 
Sbjct:  1035 NDI-ELCRLFSLSEEF-KYVTVRQDEKMELAKLLDRVPIPVKETLEDPSAKINVLLQVYI 1092

Query:  1447 EKLHGGSEGFWILVED---VDSEAIRLIQACVDVLSSNGWLSPAVAAMEVAQMITQAMWS 1503
              KL    EG   L  D   +   A RL++A  +++   GW   +  A+ +++M+ + MWS
Sbjct:  1093 SKLK--LEGL-SLTSDMVYITQSAGRLLRAIFEIVLKRGWAQLSQKALNLSKMVGKRMWS 1149

Query:  1504 KDSYLKQLPHFNADIIKRCTEKGV--ETVFDI 1533
               + L Q P    +I+ +  +  +  E  +D+
Sbjct:  1150 VQTPLWQFPGIPKEILMKLEKNDLVWERYYDL 1181

 Score = 58 (25.5 bits), Expect = 2.2e-199, Sum P(6) = 2.2e-199
 Identities = 15/54 (27%), Positives = 31/54 (57%)

Query:   761 PRGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNFGK 814
             P G+GKT  A   +L+    H+  +G  +A   +++Y+AP+ ++ +E   ++ K
Sbjct:  1375 PTGSGKTICAEFAILRN---HL--EGPDSA--MRVVYIAPLEAIAKEQFRDWEK 1421

 Score = 40 (19.1 bits), Expect = 2.1e-297, Sum P(4) = 2.1e-297
 Identities = 9/28 (32%), Positives = 16/28 (57%)

Query:  1505 DSYLKQLPH--FNADIIKRCTEKGVETV 1530
             +S+L+   H  FNA+++ R  E   + V
Sbjct:  1753 ESHLQHFLHDNFNAEVVARVIENKQDAV 1780


>ASPGD|ASPL0000051297 [details] [associations]
            symbol:AN10194 species:162425 "Emericella nidulans"
            [GO:0000393 "spliceosomal conformational changes to generate
            catalytic conformation" evidence=IEA] [GO:0005681 "spliceosomal
            complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00382 SMART:SM00490 GO:GO:0005524 EMBL:BN001307
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
            GO:GO:0046540 GO:GO:0000388 GO:GO:0008026
            EnsemblFungi:CADANIAT00008099 OMA:AMNEACY Uniprot:C8VMF3
        Length = 2208

 Score = 1411 (501.8 bits), Expect = 0., Sum P(5) = 0.
 Identities = 264/452 (58%), Positives = 337/452 (74%)

Query:  1017 WGVNLPAHTVVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRW 1076
             +G++    ++ DR  V+ LF D  IQVLV TATLAWGVNLPAHTVIIKGTQ+Y+PEKG W
Sbjct:   837 FGIHHAGLSLADRDSVQALFKDGSIQVLVCTATLAWGVNLPAHTVIIKGTQVYSPEKGSW 896

Query:  1077 VELGALDVLQMLGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMISKLPDML 1136
             VEL   DVLQMLGRAGRPQYDT GEG++IT  +E+QYYLSL+N QLP+ESQ++SKL D +
Sbjct:   897 VELSPQDVLQMLGRAGRPQYDTYGEGIIITTQAEIQYYLSLMNQQLPIESQLVSKLADNM 956

Query:  1137 NAEIVLGTVQNLKDAVTWLGYTYLYIRMLRAPNLYGISHDALKEDPLLECHRADLIHTAA 1196
             NAEIVLG ++   + V WLGYTYL++RMLR+P LY +  D  + D  LE  R DL+H+AA
Sbjct:   957 NAEIVLGNIRTRDEGVDWLGYTYLFVRMLRSPGLYSVGAD-YENDDALEQKRVDLVHSAA 1015

Query:  1197 LHLERSGLIKYDRKSGHMQVTELGRIASHYYCTHETMATYNQLLKPTLSEIELFRVFSLS 1256
             + LE++GL+KYD+K+G +Q TELGRIASHYY  H +M TYNQ L+P++  IELFR+F+LS
Sbjct:  1016 VLLEKAGLVKYDKKTGRLQSTELGRIASHYYIGHNSMLTYNQHLQPSIGNIELFRIFALS 1075

Query:  1257 GEFRHITVRXXXXXXXXXXXXRAPIPIKESTDEPSAKVNILLQAYISQLKLEGFALMSDM 1316
              EF++I VR            R P+P+KE  DEP AK+N+LLQAYIS+LKLEG ALM+D+
Sbjct:  1076 DEFKYIPVRQDEKLELAKMLGRVPVPVKEGIDEPHAKINVLLQAYISRLKLEGLALMADL 1135

Query:  1317 VFVTQSAARLMRAIFEIVLYRGWAQLADKALSLCKMVDRRMWQSMSPLRQFRXXXXXXXX 1376
             V+VTQSA R++RA+FEI L RGWA +A  AL LCKM +RRMW +MSPLRQF         
Sbjct:  1136 VYVTQSAGRILRALFEICLRRGWASVAKNALDLCKMAERRMWPTMSPLRQFPRCPRDILQ 1195

Query:  1377 XXXXXNFPWERLYDLGPNEIGELIRVPKLGKTIHKYVHQFPKLELATHIQPITRSTLRVE 1436
                  + PW   +DL P  +GEL+ +P+ GKT+   V +FP+LE+   +QPITRS LRVE
Sbjct:  1196 KSERIDVPWGSYFDLDPPRMGELLGMPRAGKTVCDLVSKFPRLEVQAQVQPITRSMLRVE 1255

Query:  1437 LTISPDFQWDEKLHGGSEGFWILVEDVDSEAI 1468
             LTI+P+F WDE+LHG ++ FWI+VED D E I
Sbjct:  1256 LTITPNFVWDEELHGTAQDFWIMVEDCDGEEI 1287

 Score = 718 (257.8 bits), Expect = 0., Sum P(5) = 0.
 Identities = 133/215 (61%), Positives = 171/215 (79%)

Query:   815 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 874
             DEIHLLHDERGPV+E++++RTIR +E T + VR+VGLSATLPNY+DVA+ LR+ P  GLF
Sbjct:   668 DEIHLLHDERGPVIESIVSRTIRQVEQTGDAVRIVGLSATLPNYRDVASFLRVDPAKGLF 727

Query:   875 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAG--RNQLLVFVHSRKETG 932
             +FD S+RP  L+Q++IGVT+KK +K+ ++MNDI Y KV+EH G  RNQ+L+FVHSRKET 
Sbjct:   728 HFDGSYRPCPLKQEFIGVTDKKPIKQLKIMNDICYNKVIEHVGQNRNQMLIFVHSRKETA 787

Query:   933 KTARAIRDMCLEKDTLGQFLREGSASMEVLRTEADQVKNGELRDLLPYGFAIHHAGMTRV 992
             KTA+ +RD  LE +T+GQ L+  SAS  +L  EA+ V +  L+D+LPYGF IHHAG++  
Sbjct:   788 KTAKYLRDKALEMETIGQILKSDSASRAILAEEAESVNDAALKDILPYGFGIHHAGLSLA 847

Query:   993 DRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
             DR  V+ LF D  IQVLV TATLAWGVNLPAHTV+
Sbjct:   848 DRDSVQALFKDGSIQVLVCTATLAWGVNLPAHTVI 882

 Score = 511 (184.9 bits), Expect = 0., Sum P(5) = 0.
 Identities = 121/330 (36%), Positives = 181/330 (54%)

Query:   246 GGEDAEGTGRKKDKSLHPLDIDAYWLQRRLSKIYDDAMVSQAKAGEVLNILKSAGDD--- 302
             GG  A+G  +KK   +   DIDAYWLQR++   Y DA + Q KA + L I++   +D   
Sbjct:   282 GGASADGEQQKKGLIVSARDIDAYWLQRQIGAAYSDAHIQQEKATQALEIMEGKTEDGSP 341

Query:   303 ---RDAENQLVLLLGYDCFDFIKMLKKYRQMILYCTLLASSQSESERQKLRDT-MSE--- 355
                RD EN L+ L  YD  D +  L   R  +++ T       +++ + L ++ M E   
Sbjct:   342 RSLRDVENDLMELFDYDFPDLVAKLVTNRDKVVWTTRWRRVAEDADARNLVESEMVEAGH 401

Query:   356 ----DPALAK-ILRQLDTGKNEDGDANDSADAR-QSTSIRHQMXXXXXXXXXXXXXTRQV 409
                 D    K + R  D+G+ E     D  D          +               +++
Sbjct:   402 RGILDEIRGKTVSRDNDSGRPEKRIKMDLMDVDLPKAPAAAEEKKTADGGLVRGLQPKRL 461

Query:   410 LDLEDLQFSSGSHFMSNKRCELPDGSFRKQRKGYEEVHVPALKPKPMGPDETLVPIDKLP 469
             ++LE+L F  G+H M+N   +LP GS ++  KGYEE+HVP  K K   P E  V I +LP
Sbjct:   462 INLENLVFHQGNHLMTNPNVKLPQGSTKRTFKGYEEIHVPQPKSK-QEPGERKVAISELP 520

Query:   470 RYVQHAFEDFKTLNRIQSRLCKSALESDENLLLCAPTGAGKTNVALLCMLQEIGKHINAD 529
              + +  F D K LNRIQ++   SA + D N+L+CAPTG+GKTNVA+L +L+E+GK+ N+ 
Sbjct:   521 EWARIGFGDAKELNRIQTKCYPSAFQDDGNMLVCAPTGSGKTNVAMLSILREVGKNRNSQ 580

Query:   530 -GTINADEFKIIYVAPMRSLVQEMVGNFGK 558
              G I  D+FKI+Y++P+++LVQE V NFG+
Sbjct:   581 TGEIMLDDFKIVYISPLKALVQEQVENFGR 610

 Score = 415 (151.1 bits), Expect = 1.9e-209, Sum P(5) = 1.9e-209
 Identities = 103/371 (27%), Positives = 176/371 (47%)

Query:   997 VEDLFADRHIQVLVSTATLAWGVNLPAHTVVDRTLVEDLFADRHIQVLVSTATLAWGVNL 1056
             ++ L    H + L  + +   G    A +  D+ +V  L+    IQV++++  + W +NL
Sbjct:  1654 LQPLLGRVHERTLAESLSHGIGYYHEALSQTDKRIVSHLYNIGAIQVVIASRDVCWELNL 1713

Query:  1057 PAHTVIIKGTQIYNPEKGRWVELGALDVLQMLGRAGRPQYDTKGEGVLITNHSELQYYLS 1116
               H V++ GTQ +   + R+++    ++LQM G+A RP  D  G GVL+    + +YY  
Sbjct:  1714 TGHLVVVMGTQFFEGREHRYIDYPISEILQMFGKASRPGQDKVGRGVLMVPTVKREYYKK 1773

Query:  1117 LLNHQLPVESQMISKLPDMLNAEIVLGTVQNLKDAVTWLGYTYLYIRMLRAPNLYGISHD 1176
              LN  LPVES +   + D    EI  GT+ + +D+V WL YTY Y R+L  P+ YG++ D
Sbjct:  1774 FLNEALPVESHLQLYMHDAFVTEISQGTIASTQDSVDWLTYTYFYRRLLANPSFYGLT-D 1832

Query:  1177 ALKEDPLLECHRADLIHTAALHLERSGLIKYDRKSGHMQVTELGRIASHYYCTHETMATY 1236
                E   L    ++L+      L  + +I  D +   +       I ++Y  ++ TM T+
Sbjct:  1833 ISHEG--LSTFLSELVENTLKELSEAKIIDLDEEDDSVSPLNAASIGAYYNISYITMQTF 1890

Query:  1237 NQLLKPTLSEIELFRVFSLSGEFRHITVRXXXXXXXXXXXXRAPIPIKE-STDEPSAKVN 1295
                L        +  + + + EF  + +R            R P+   + + D P  K  
Sbjct:  1891 LLSLSARTKLKGILEIVTAATEFESVQMRRHEEHILRRVYDRVPVKTSQVAFDSPHFKSF 1950

Query:  1296 ILLQAYISQLKLEGFALMSDMVFVTQSAARLMRAIFEIVLYRGWAQLADKALSLCKMVDR 1355
             +LLQA+ S+++L    L  D   +   A  L+ A  +I+   G    A  A+ + +MV +
Sbjct:  1951 VLLQAHFSRMQLP-IDLAKDQEVIVSKALNLLSACVDILASEGHMN-AMNAMEMSQMVVQ 2008

Query:  1356 RMWQSMSPLRQ 1366
              MW   SPL+Q
Sbjct:  2009 AMWDRDSPLKQ 2019

 Score = 412 (150.1 bits), Expect = 0., Sum P(5) = 0.
 Identities = 87/238 (36%), Positives = 133/238 (55%)

Query:  1461 EDVDSEAIRLIQACVDVLSSNGWLSPAVAAMEVAQMITQAMWSKDSYLKQLPHFNADIIK 1520
             E + S+A+ L+ ACVD+L+S G ++ A+ AME++QM+ QAMW +DS LKQ+PHF  + IK
Sbjct:  1971 EVIVSKALNLLSACVDILASEGHMN-AMNAMEMSQMVVQAMWDRDSPLKQIPHFGPEAIK 2029

Query:  1521 RCTEKGVETVFDIMXXXXXXXXXXXXXXXXXX-------ADVARFCN-RYPNIELSYEVL 1572
                E  +  +F+ M                         A  A F N +YP +EL +EV 
Sbjct:  2030 VANEYNINDIFEFMDAMDPSENKDYNTLVKRLNLDNKQLAQAAAFTNNKYPILELDFEVE 2089

Query:  1573 NKDRIXXXXXXXXXXXLDRE----DEVTGPVIAPFYPQKREEGWWVVIGDPKTNSLLSIK 1628
             + + I           ++RE    +E    V APFYP ++ E WW+V+GD KT +LL+IK
Sbjct:  2090 DPENITAGEPAYLKIKVEREVDEDEEFDTTVHAPFYPGQKMENWWLVVGDEKTRNLLAIK 2149

Query:  1629 RLTLQQKAKIKLDFVAPNPGHHSYALYFMSDAYLGCDQEYKFSIDVSEYYSGGESDSD 1686
             R+T+ +K +++LD+  P PG H   LY M D+Y+G DQ   F++  +E     ES+ +
Sbjct:  2150 RVTIGRKLELRLDYTVPTPGEHELTLYLMCDSYVGVDQAPTFTVRAAEGMEEDESEEE 2207

 Score = 392 (143.0 bits), Expect = 6.5e-297, Sum P(5) = 6.5e-297
 Identities = 80/154 (51%), Positives = 109/154 (70%)

Query:   559 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 618
             DEIHLLHDERGPV+E++++RTIR +E T + VR+VGLSATLPNY+DVA+ LR+ P  GLF
Sbjct:   668 DEIHLLHDERGPVIESIVSRTIRQVEQTGDAVRIVGLSATLPNYRDVASFLRVDPAKGLF 727

Query:   619 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAG--RNQLLVST-LRVELT 675
             +FD S+RP  L+Q++IGVT+KK +K+ ++MNDI Y KV+EH G  RNQ+L+    R E  
Sbjct:   728 HFDGSYRPCPLKQEFIGVTDKKPIKQLKIMNDICYNKVIEHVGQNRNQMLIFVHSRKETA 787

Query:   676 ISPDFQWDEKLHGGSEGFWILVEDVDSEVVLHHE 709
              +  +  D+ L   + G  IL  D  S  +L  E
Sbjct:   788 KTAKYLRDKALEMETIG-QILKSDSASRAILAEE 820

 Score = 287 (106.1 bits), Expect = 3.1e-163, Sum P(6) = 3.1e-163
 Identities = 51/95 (53%), Positives = 73/95 (76%)

Query:   668 STLRVELTISPDFQWDEKLHGGSEGFWILVEDVDSEVVLHHEYFLLKSRYAT---DDHVV 724
             S LRVELTI+P+F WDE+LHG ++ FWI+VED D E +L H+ F+L+  YA    ++H+V
Sbjct:  1250 SMLRVELTITPNFVWDEELHGTAQDFWIMVEDCDGEEILFHDQFVLRKDYAESEMNEHLV 1309

Query:   725 KFFVPVFEPLPPQYFLRIVSDRWIGAETILPVSFR 759
             +F VP+ EP+PP YF+ +VSDRW+ +ET + VSF+
Sbjct:  1310 EFTVPITEPMPPNYFISLVSDRWMHSETRIAVSFQ 1344

 Score = 236 (88.1 bits), Expect = 0., Sum P(5) = 0.
 Identities = 75/221 (33%), Positives = 114/221 (51%)

Query:    10 QYEYKANSNLVLQADVRLIERRSRDEATG--EVCSLVGKLE-GTRMG-DRFMRTK----- 60
             QY+Y A SNLVLQAD R I R + +       +   +   E G+R+  D   ++K     
Sbjct:     8 QYKYSAMSNLVLQADRRFISRVNDEATGDPESLAGRISIREMGSRIARDDAPKSKKKAVG 67

Query:    61 PIKAEERKVKRQKRDEAQYDFTRMKG--ATLLSEGV----DEMV-GIIYRPKTQETRQTY 113
             P+  E   ++  +   A+    R KG  A L  +G+    D ++ G+ YRP+T  TR TY
Sbjct:    68 PVDIERGAIREGEDVLAREQKKRQKGQPAQLRGQGILSAADALIEGLKYRPRTPATRATY 127

Query:   114 EVLLSFIQEALGDQPRDILCGAADEVLTVLKNDRMXXXXXXXXTENLLG-SLAEERFALL 172
             +++L+     LGD   +++  AAD VL VLK++ M         ++LLG SL  + F  L
Sbjct:   128 DLILTLTASRLGDVSHEVVRSAADAVLEVLKDEEMKDFDKKREIDDLLGTSLDPKEFNEL 187

Query:   173 VNLGKKITDFGAEQKS------TTAEEN--IDDTYGINVQF 205
             VNLGKKITD+ A+ +        T E+   +D+  G+ V F
Sbjct:   188 VNLGKKITDYDAQDEDEEMGDGVTGEDEAELDERQGVAVVF 228

 Score = 211 (79.3 bits), Expect = 7.0e-153, Sum P(6) = 7.0e-153
 Identities = 59/216 (27%), Positives = 100/216 (46%)

Query:   812 FGKDEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPET 871
             F  DE+H+L    G V E +++R       T+  +R+VGLS  L N +D+   +     T
Sbjct:  1508 FVADELHMLGGYGGYVYEVVVSRMHSIALQTESGMRIVGLSVPLSNARDIGEWIGASKHT 1567

Query:   872 GLFYFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQLLVFVHSRKET 931
              ++ F    RPV LE      +          M    Y  +++ +     L+FV +RK+T
Sbjct:  1568 -IYNFSPHARPVPLELHIQSFSIPHFPSLMLAMARPAYLSILQLSADKPALIFVPNRKQT 1626

Query:   932 GKTARAIRDMCLEKDTLGQFLREGSASMEVLRTEADQVKNGELRDLLPYGFAIHHAGMTR 991
               TA  +   C   D   +FL    A +E L+    +V    L + L +G   +H  +++
Sbjct:  1627 RATAIDLLTACSIDDDEDRFLH---ADIEELQPLLGRVHERTLAESLSHGIGYYHEALSQ 1683

Query:   992 VDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
              D+ +V  L+    IQV++++  + W +NL  H VV
Sbjct:  1684 TDKRIVSHLYNIGAIQVVIASRDVCWELNLTGHLVV 1719

 Score = 164 (62.8 bits), Expect = 1.1e-294, Sum P(5) = 1.1e-294
 Identities = 30/55 (54%), Positives = 45/55 (81%)

Query:   761 PRGAGKTNVALLCMLQEIGKHINAD-GTINADEFKIIYVAPMRSLVQEMVGNFGK 814
             P G+GKTNVA+L +L+E+GK+ N+  G I  D+FKI+Y++P+++LVQE V NFG+
Sbjct:   556 PTGSGKTNVAMLSILREVGKNRNSQTGEIMLDDFKIVYISPLKALVQEQVENFGR 610

 Score = 127 (49.8 bits), Expect = 1.8e-102, Sum P(5) = 1.8e-102
 Identities = 36/119 (30%), Positives = 62/119 (52%)

Query:   443 YEEVHVPALKPKPMGP--DETLVPIDKLPR-YVQHAFEDFKTLNRIQSRLCKSALESDEN 499
             ++++ +P   P P  P  D    P+  L R   Q  + D++  N+IQ++  K+  ESD+N
Sbjct:  1343 FQKLILPERFP-PHTPLLDMQRAPVKALKRDEYQRLYPDWEYFNKIQTQTFKTLFESDDN 1401

Query:   500 LLLCAPTGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNFGK 558
             + + APTG+GKT  A L +L+   K          D  + +YVAP + L+   + ++ K
Sbjct:  1402 VFIGAPTGSGKTVCAELAILRHWAKE---------DSGRAVYVAPFQELIDSRLEDWKK 1451

 Score = 98 (39.6 bits), Expect = 4.3e-143, Sum P(5) = 4.3e-143
 Identities = 25/75 (33%), Positives = 38/75 (50%)

Query:   556 FGKDEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPET 615
             F  DE+H+L    G V E +++R       T+  +R+VGLS  L N +D+   +     T
Sbjct:  1508 FVADELHMLGGYGGYVYEVVVSRMHSIALQTESGMRIVGLSVPLSNARDIGEWIGASKHT 1567

Query:   616 GLFYFDNSFRPVALE 630
              ++ F    RPV LE
Sbjct:  1568 -IYNFSPHARPVPLE 1581

 Score = 88 (36.0 bits), Expect = 4.9e-137, Sum P(4) = 4.9e-137
 Identities = 37/133 (27%), Positives = 60/133 (45%)

Query:  1398 ELIRVPKLGKTIHKY--VHQFPKLELATHIQ----PITRSTLRVELTISPDFQ-WDEKLH 1450
             EL R+  L     KY  V Q  KLELA  +     P+          I+   Q +  +L 
Sbjct:  1067 ELFRIFALSDEF-KYIPVRQDEKLELAKMLGRVPVPVKEGIDEPHAKINVLLQAYISRLK 1125

Query:  1451 GGSEGFWILVE--DVDSEAIRLIQACVDVLSSNGWLSPAVAAMEVAQMITQAMWSKDSYL 1508
                EG  ++ +   V   A R+++A  ++    GW S A  A+++ +M  + MW   S L
Sbjct:  1126 --LEGLALMADLVYVTQSAGRILRALFEICLRRGWASVAKNALDLCKMAERRMWPTMSPL 1183

Query:  1509 KQLPHFNADIIKR 1521
             +Q P    DI+++
Sbjct:  1184 RQFPRCPRDILQK 1196

 Score = 53 (23.7 bits), Expect = 3.1e-174, Sum P(6) = 3.1e-174
 Identities = 16/54 (29%), Positives = 26/54 (48%)

Query:   761 PRGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNFGK 814
             P G+GKT  A L +L+   K          D  + +YVAP + L+   + ++ K
Sbjct:  1407 PTGSGKTVCAELAILRHWAKE---------DSGRAVYVAPFQELIDSRLEDWKK 1451

 Score = 38 (18.4 bits), Expect = 1.2e-172, Sum P(6) = 1.2e-172
 Identities = 16/49 (32%), Positives = 25/49 (51%)

Query:   790 ADEFKIIYVAPMRSL-VQEMVGNFG---KDEIHLLHDERGPVLEALIAR 834
             +DEFK I V     L + +M+G      K+ I   H +   +L+A I+R
Sbjct:  1075 SDEFKYIPVRQDEKLELAKMLGRVPVPVKEGIDEPHAKINVLLQAYISR 1123

 Score = 38 (18.4 bits), Expect = 8.0e-170, Sum P(5) = 8.0e-170
 Identities = 11/23 (47%), Positives = 12/23 (52%)

Query:  1075 RWVELGALDVLQMLGRAGRPQYD 1097
             R VEL   D L MLG  G   Y+
Sbjct:  1503 RAVELFVADELHMLGGYGGYVYE 1525

 Score = 38 (18.4 bits), Expect = 1.7e-31, Sum P(2) = 1.7e-31
 Identities = 11/30 (36%), Positives = 16/30 (53%)

Query:  1158 TYLYIRMLRAPNLYGISHDALKE--DPLLE 1185
             TY  I  L A  L  +SH+ ++   D +LE
Sbjct:   126 TYDLILTLTASRLGDVSHEVVRSAADAVLE 155


>DICTYBASE|DDB_G0270042 [details] [associations]
            symbol:ascc3l "U5 small nuclear ribonucleoprotein 200
            kDa helicase" species:44689 "Dictyostelium discoideum" [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008380 "RNA
            splicing" evidence=ISS] [GO:0005681 "spliceosomal complex"
            evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00382
            SMART:SM00490 dictyBase:DDB_G0270042 GO:GO:0005524
            EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0008380
            GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889 SMART:SM00611
            SMART:SM00973 eggNOG:COG1204 KO:K12854 OMA:KWDVLSR GO:GO:0008026
            RefSeq:XP_646493.1 ProteinModelPortal:Q55CI8 STRING:Q55CI8
            EnsemblProtists:DDB0233131 GeneID:8617455 KEGG:ddi:DDB_G0270042
            InParanoid:Q55CI8 ProtClustDB:CLSZ2431432 Uniprot:Q55CI8
        Length = 2237

 Score = 1382 (491.5 bits), Expect = 0., Sum P(6) = 0.
 Identities = 269/470 (57%), Positives = 340/470 (72%)

Query:  1002 ADRHIQVLVSTATLAWGVNLPAHTVV---DRTLVEDLFADRHIQVLVSTATLAWGVNLPA 1058
             A + IQ       L +G+ +  H  +   DR+LVEDLF D  IQVL+STATLAWGVNLPA
Sbjct:   835 ASKQIQNAELKDLLPYGIGIH-HAGLSRSDRSLVEDLFGDNRIQVLISTATLAWGVNLPA 893

Query:  1059 HTVIIKGTQIYNPEKGRWVELGALDVLQMLGRAGRPQYDTKGEGVLITNHSELQYYLSLL 1118
             HTVIIKGTQIYNPEKG W EL  LDV QMLGRAGRP +D +GEG++IT+  ELQ+YLSLL
Sbjct:   894 HTVIIKGTQIYNPEKG-WCELSPLDVTQMLGRAGRPPFDKEGEGIIITSQHELQFYLSLL 952

Query:  1119 NHQLPVESQMISKLPDMLNAEIVLGTVQNLKDAVTWLGYTYLYIRMLRAPNLYGISHDAL 1178
             N QL +ESQ IS++ D LNAEIVLG++Q ++DAV WLGYTYLYI M+R P LY IS+D  
Sbjct:   953 NTQLSIESQFISRIADNLNAEIVLGSIQTVRDAVNWLGYTYLYICMIRNPPLYEISYDDF 1012

Query:  1179 KEDPLLECHRADLIHTAALHLERSGLIKYDRKSGHMQVTELGRIASHYYCTHETMATYNQ 1238
             ++DPLLE  R DL+H+AA  LE++ LIKYDRKSG +Q TELG++ASHYY T+ +M+ Y +
Sbjct:  1013 EKDPLLEQRRLDLVHSAATILEKNSLIKYDRKSGKLQSTELGKVASHYYITNSSMSIYQE 1072

Query:  1239 LLKPTLSEIELFRVFSLSGEFRHITVRXXXXXXXXXXXXRAPIPIKESTDEPSAKVNILL 1298
              LKP++S+IEL RVFSLS EF+++ VR            R PIPIKE+ +EPS+K+N+LL
Sbjct:  1073 HLKPSMSDIELLRVFSLSSEFKNVVVREGEKFELEKLLERVPIPIKENIEEPSSKINVLL 1132

Query:  1299 QAYISQLKLEGFALMSDMVFVTQSAARLMRAIFEIVLYRGWAQLADKALSLCKMVDRRMW 1358
             Q YIS LKL+GFAL+ DM ++ QSA+R+ RA+FEIVL +GWAQLA K L+L KM+D +MW
Sbjct:  1133 QTYISNLKLDGFALVVDMFYIAQSASRITRALFEIVLKKGWAQLAKKILNLAKMIDSKMW 1192

Query:  1359 QSMSPLRQFRXXXXXXXXXXXXXNFPWERLYDLGPNEIGELIRVPKLGKTIHKYVHQFPK 1418
              S SPLRQF                P E LY+    ++G  I+ P  GK +   +H FPK
Sbjct:  1193 SSQSPLRQFHKISPKVLNQLERRGIPIEDLYEYNSQQLGNAIQNPSEGKQLFDLIHNFPK 1252

Query:  1419 LELATHIQPITRSTLRVELTISPDFQWDEKLHGGSEGFWILVEDVDSEAI 1468
             L+L  H+QPI    LRVEL+I+PDFQ+DE+ H  S G+WI+VEDVD E I
Sbjct:  1253 LDLTAHVQPILHGLLRVELSITPDFQYDERYHNNSIGWWIIVEDVDGERI 1302

 Score = 710 (255.0 bits), Expect = 0., Sum P(6) = 0.
 Identities = 133/214 (62%), Positives = 176/214 (82%)

Query:   815 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 874
             DEIHLLHDERGPVLE ++ART+R IE+TQ+ VRLVGLSATLPNY+DVAT LR++P+ G+F
Sbjct:   687 DEIHLLHDERGPVLECIVARTLRMIESTQQMVRLVGLSATLPNYEDVATFLRVEPD-GVF 745

Query:   875 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQLLVFVHSRKETGKT 934
             YFD+S+RP+ LEQQYIG++++  +K+ Q  NDI + KV E  G +Q+L+FVHSR+ET KT
Sbjct:   746 YFDSSYRPIPLEQQYIGISDR-GIKQLQRCNDITFTKVSERVGDHQILIFVHSRRETAKT 804

Query:   935 ARAIRDMCLEKDTLGQFLREGSASMEVLR-TEADQVKNGELRDLLPYGFAIHHAGMTRVD 993
              + +RD  +E  ++ +++R+  AS E+LR T + Q++N EL+DLLPYG  IHHAG++R D
Sbjct:   805 GKDLRDRAVEDQSIDRYIRD-PASREILRATASKQIQNAELKDLLPYGIGIHHAGLSRSD 863

Query:   994 RTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
             R+LVEDLF D  IQVL+STATLAWGVNLPAHTV+
Sbjct:   864 RSLVEDLFGDNRIQVLISTATLAWGVNLPAHTVI 897

 Score = 611 (220.1 bits), Expect = 0., Sum P(6) = 0.
 Identities = 129/303 (42%), Positives = 189/303 (62%)

Query:   259 KSLHPLDIDAYWLQRRLSKIYDDAMVSQAKAGEVLNILKSAGDDRDAENQLVLLLGYDCF 318
             K + P +ID++W+QR++S+   D  +S+  A + LNIL+   + R  E QLV L   D  
Sbjct:   328 KLISPNEIDSFWIQRKISEFERDHDLSKQLAEKTLNILRQP-NVRRCEQQLVDLFTIDKL 386

Query:   319 DFIKMLKKYRQMILYCTLLASSQSESERQKLRDTMSEDPALAKILRQLDTGKNEDGDAND 378
             DF+K++   +Q ILYCTLLA ++++ ER+K+ D MS +P    IL +L   +        
Sbjct:   387 DFLKLIINNKQTILYCTLLAKAENDQERKKIEDEMSSNPVTLSILNRLKGNEVTAATTEK 446

Query:   379 SADARQSTSIRHQMXXXXXXXXXXXXXTRQVLDLEDLQFSSGSHFMSNKRCELPDGSFRK 438
             + +  +S     +M              +++L+LE+L F  GSH M+NK  + P GS R+
Sbjct:   447 TIEKTESNKKDVEMKQQQQQQQDEIKKPKKLLNLEELSFQQGSHLMTNKEFKFPKGSKRE 506

Query:   439 QRKGYEEVHVPALKPKPMGPDETLVPIDKLPRYVQHAFED--FKTLNRIQSRLCKSALES 496
             Q KG+EE+HVPA    P  P+E L+ I++LP + +  FE+   K+LNR+QS+L   A ++
Sbjct:   507 QYKGFEEIHVPARANPPFNPNERLISIEELPEWSRLPFEESGVKSLNRVQSKLFDCAFKT 566

Query:   497 DENLLLCAPTGAGKTNVALLCMLQEIGKHINAD-GTINADEFKIIYVAPMRSLVQEMVGN 555
             D NLLL APT +GKTNVA+L +L EIGK+ + D G I  D FKI+Y+APM+SLVQEMVGN
Sbjct:   567 DNNLLLSAPTSSGKTNVAMLTILHEIGKNRDRDSGKIRLDAFKIVYIAPMKSLVQEMVGN 626

Query:   556 FGK 558
             F K
Sbjct:   627 FSK 629

 Score = 460 (167.0 bits), Expect = 0., Sum P(6) = 0.
 Identities = 91/219 (41%), Positives = 131/219 (59%)

Query:  1467 AIRLIQACVDVLSSNGWLSPAVAAMEVAQMITQAMWSKDSYLKQLPHFNADIIKRCTEKG 1526
             A RL+QA VDV+SSN WL PA+AAME++QMITQAMW  DS  KQLPH N   I   T +G
Sbjct:  1999 ATRLLQAIVDVISSNSWLQPAIAAMELSQMITQAMWDSDSVFKQLPHMNKRRIDAITSQG 2058

Query:  1527 VETVFDIMXXXXXXXXXXXXXXXXXXADVARFCNRYPNIELSYEVLNKDRIXXXXXXXXX 1586
             +E+VFD+M                   D+ +   +YP+I++SY+V ++D +         
Sbjct:  2059 IESVFDLMSLDDNSRIQLLDLSQQESNDLVQSFMKYPDIDISYQVQDEDDLHADSIMTVE 2118

Query:  1587 XXLDRE--DEVTGP---------VIAPFYPQKREEGWWVVIGDPKTNSLLSIKRLTLQQK 1635
               ++R+  D+   P         V AP+YP+++  GWW +IGD K N LL+IKR+T  +K
Sbjct:  2119 MVIERDLGDDEENPIEINDSINVVSAPYYPKEKICGWWALIGDSKNNHLLAIKRITFLKK 2178

Query:  1636 AKIKLDFVAPNPGHHSYALYFMSDAYLGCDQEYKFSIDV 1674
              K+K +F  P  G H  +LY  SD+Y GCDQE++ +I++
Sbjct:  2179 TKVKFEFPTPAVGKHQLSLYLFSDSYNGCDQEHELNINI 2217

 Score = 458 (166.3 bits), Expect = 8.0e-195, Sum P(8) = 8.0e-195
 Identities = 131/439 (29%), Positives = 214/439 (48%)

Query:  1028 DRTLVEDLFADRHIQVLVSTATLAWGV-NLPAHTVIIKGTQIYNPEKGRWVELGALDVLQ 1086
             +R +VE LF    I+VL++T ++AW + N+ A  V+I GTQ+Y  +  R+++    D+LQ
Sbjct:  1701 ERRVVEILFRSGSIRVLIATHSVAWLLDNVFAQLVVIMGTQLYQGKDIRYIDYPINDILQ 1760

Query:  1087 MLGRAGRPQ----YDTKGEGVLITNHS-ELQYYLSLLNHQLPVESQMISKLPDMLNAEIV 1141
             M+GRAG+ +       K   VL+  H+ + +YY   LN  LPVES +   L D  N+EIV
Sbjct:  1761 MIGRAGKQEGGGVISNKVAKVLLLCHAPKKEYYKMFLNEPLPVESHLDHCLHDQFNSEIV 1820

Query:  1142 LGTVQNLKDAVTWLGYTYLYIRMLRAPNLY---GISHDALKEDPLLECHRADLIHTAALH 1198
               T+   +DA+ +L +T+LY R+ + PN Y   G+SH  L E      H ++L+    + 
Sbjct:  1821 TKTITKKQDALDYLTWTFLYRRLNQNPNYYNLSGVSHLHLSE------HLSELVENTLVE 1874

Query:  1199 LERSGLIKYDRKSGHMQVTELGRIASHYYCTHETMATYNQLLKPTLSEIELFRVFSLSGE 1258
             LE+S  I        +    LG IAS+YY  ++T+  +   LK T     +  + S + E
Sbjct:  1875 LEQSNCITIQDDQDKVSPLNLGIIASYYYLKYQTIELFGSSLKSTTRRRGIMDIISNAPE 1934

Query:  1259 FRHITVRXXXXXXXXXXXXRAPIPI-KESTDEPSAKVNILLQAYISQLKLEGFALMSDMV 1317
             F  + +R              P  I K +  E S KVN+LLQ + S+  +    L  D  
Sbjct:  1935 FNSLPIRHREDQILMKLASHLPQKIDKPNYQEISTKVNVLLQCHFSRESISA-DLYQDQK 1993

Query:  1318 FVTQSAARLMRAIFEIVLYRGWAQLADKALSLCKMVDRRMWQSMSPLRQFRXXXXXXXXX 1377
             F+ ++A RL++AI +++    W Q A  A+ L +M+ + MW S S  +Q           
Sbjct:  1994 FILENATRLLQAIVDVISSNSWLQPAIAAMELSQMITQAMWDSDSVFKQLPHMNKRRIDA 2053

Query:  1378 XXXXNFPWERLYDLGPNEIGELIRVPKLGKT-IHKYVHQF---PKLELATHIQPI----T 1429
                     E ++DL   +    I++  L +   +  V  F   P ++++  +Q       
Sbjct:  2054 ITSQGI--ESVFDLMSLDDNSRIQLLDLSQQESNDLVQSFMKYPDIDISYQVQDEDDLHA 2111

Query:  1430 RSTLRVELTISPDFQWDEK 1448
              S + VE+ I  D   DE+
Sbjct:  2112 DSIMTVEMVIERDLGDDEE 2130

 Score = 369 (135.0 bits), Expect = 2.9e-314, Sum P(6) = 2.9e-314
 Identities = 69/109 (63%), Positives = 92/109 (84%)

Query:   559 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 618
             DEIHLLHDERGPVLE ++ART+R IE+TQ+ VRLVGLSATLPNY+DVAT LR++P+ G+F
Sbjct:   687 DEIHLLHDERGPVLECIVARTLRMIESTQQMVRLVGLSATLPNYEDVATFLRVEPD-GVF 745

Query:   619 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQLLV 667
             YFD+S+RP+ LEQQYIG++++  +K+ Q  NDI + KV E  G +Q+L+
Sbjct:   746 YFDSSYRPIPLEQQYIGISDR-GIKQLQRCNDITFTKVSERVGDHQILI 793

 Score = 295 (108.9 bits), Expect = 4.9e-195, Sum P(8) = 4.9e-195
 Identities = 53/96 (55%), Positives = 73/96 (76%)

Query:   665 LLVSTLRVELTISPDFQWDEKLHGGSEGFWILVEDVDSEVVLHHEYFLLKSRYAT-DDHV 723
             +L   LRVEL+I+PDFQ+DE+ H  S G+WI+VEDVD E +L+ EYF LK +    +D +
Sbjct:  1262 ILHGLLRVELSITPDFQYDERYHNNSIGWWIIVEDVDGERILYFEYFSLKKKMVNGEDQL 1321

Query:   724 VKFFVPVFEPLPPQYFLRIVSDRWIGAETILPVSFR 759
             V F VP+ +PLPPQY++R++SD WIGAE  LP+SF+
Sbjct:  1322 VSFTVPLSQPLPPQYYVRVISDHWIGAEYSLPISFQ 1357

 Score = 220 (82.5 bits), Expect = 0., Sum P(6) = 0.
 Identities = 54/158 (34%), Positives = 85/158 (53%)

Query:    54 DRFMRTKPIKAEERKVKRQKRDEAQYDFTRMKGATLLSEGVDEMVGIIYRPKTQETRQTY 113
             D +  TK +K +    K+    ++  +    K   +LS   +   G+ Y+PKT+ETR TY
Sbjct:    84 DTYSTTKKVKNQNPLEKKSTNRKSNGNNNNEKPIDILS-ATESFQGL-YKPKTKETRITY 141

Query:   114 EVLLSFIQEALGDQPRDILCGAADEVLTVLKNDRMXXXXXXXXTENLLGSLAEERFALLV 173
             E LL+FIQ  +GDQP +++ GA DE+L++LK+D +           LL  L +  FA L 
Sbjct:   142 ETLLTFIQRYVGDQPTEVVKGALDEILSILKDDTIRAPEKKIEISKLLKGLNDVSFAELT 201

Query:   174 NLGKKITDFG--------AEQKSTTAEENIDDTYGINV 203
              LGK+ITDF          +Q+   + +++DD  G+ V
Sbjct:   202 QLGKQITDFKDSELAKQQQQQQQQQSMDSLDDEQGVAV 239

 Score = 205 (77.2 bits), Expect = 4.9e-195, Sum P(8) = 4.9e-195
 Identities = 68/218 (31%), Positives = 113/218 (51%)

Query:   815 DEIHLLHDERGPVLEALIARTIRNIEA-TQEDVRLVGLSATLPNYKDVATLLRIKPETGL 873
             DE+HL+  E GP +E +++R +R I   T   +R++ LS+++ N +D+   +   P+T  
Sbjct:  1526 DELHLIGGEYGPTMEIVVSR-MRYISTQTGNALRVIALSSSIANARDLVLWIGATPQT-C 1583

Query:   874 FYFDNSFRPVALEQQYIGVTEKKALKRFQVMND-IVYEKVMEHAGRNQLLVFVHSRK-ET 931
             + F  + RP+ +E Q  G        R   M    VYE V ++  + Q +VFV +RK   
Sbjct:  1584 YNFHPNVRPIPVEYQIQGFEFPHFNARMLAMTKPTVYE-VAKNKNQ-QSIVFVPTRKLSR 1641

Query:   932 GKTARAIRDMCLEKDTLGQ-FLREGSASMEVLRTEADQVKNGELRDLLPYGFAIHHAGMT 990
                A  I ++   +DTL + +L        VL    + V +  L+  L  G A +H G+T
Sbjct:  1642 SLAADIIANVSSFEDTLTKPYL---VCEEHVLTPYLEDVDSFALKQSLQMGVAFYHDGLT 1698

Query:   991 RVDRTLVEDLFADRHIQVLVSTATLAWGV-NLPAHTVV 1027
               +R +VE LF    I+VL++T ++AW + N+ A  VV
Sbjct:  1699 ERERRVVEILFRSGSIRVLIATHSVAWLLDNVFAQLVV 1736

 Score = 175 (66.7 bits), Expect = 5.4e-304, Sum P(6) = 5.4e-304
 Identities = 35/55 (63%), Positives = 43/55 (78%)

Query:   761 PRGAGKTNVALLCMLQEIGKHINAD-GTINADEFKIIYVAPMRSLVQEMVGNFGK 814
             P  +GKTNVA+L +L EIGK+ + D G I  D FKI+Y+APM+SLVQEMVGNF K
Sbjct:   575 PTSSGKTNVAMLTILHEIGKNRDRDSGKIRLDAFKIVYIAPMKSLVQEMVGNFSK 629

 Score = 118 (46.6 bits), Expect = 4.7e-127, Sum P(5) = 4.7e-127
 Identities = 33/123 (26%), Positives = 62/123 (50%)

Query:   559 DEIHLLHDERGPVLEALIARTIRNIEA-TQEDVRLVGLSATLPNYKDVATLLRIKPETGL 617
             DE+HL+  E GP +E +++R +R I   T   +R++ LS+++ N +D+   +   P+T  
Sbjct:  1526 DELHLIGGEYGPTMEIVVSR-MRYISTQTGNALRVIALSSSIANARDLVLWIGATPQT-C 1583

Query:   618 FYFDNSFRPVALEQQYIGVTEKKALKRFQVMND-IVYEKVMEHAGRNQLLVSTLRVELTI 676
             + F  + RP+ +E Q  G        R   M    VYE       ++ + V T ++  ++
Sbjct:  1584 YNFHPNVRPIPVEYQIQGFEFPHFNARMLAMTKPTVYEVAKNKNQQSIVFVPTRKLSRSL 1643

Query:   677 SPD 679
             + D
Sbjct:  1644 AAD 1646

 Score = 105 (42.0 bits), Expect = 0., Sum P(6) = 0.
 Identities = 31/74 (41%), Positives = 42/74 (56%)

Query:     1 MADAAARQLQYEYKANSNLVLQADVRLIERRSRDEATGEVCSLVGKLEGTRMGDRFMRTK 60
             M++  AR  QY YK NSNLV  ++ R   R    E  GE  +L G+L G  MGDR   +K
Sbjct:     1 MSEELARSKQYGYKENSNLVFYSE-R--NRSELKEPKGEPETLWGRLRG-EMGDRVNYSK 56

Query:    61 PIKAEERKVKRQKR 74
             P++  E K++  KR
Sbjct:    57 PLELLE-KMQNLKR 69

 Score = 93 (37.8 bits), Expect = 2.3e-152, Sum P(6) = 2.3e-152
 Identities = 19/76 (25%), Positives = 39/76 (51%)

Query:  1454 EGFWILVED--VDSEAIRLIQACVDVLSSNGWLSPAVAAMEVAQMITQAMWSKDSYLKQL 1511
             +GF ++V+   +   A R+ +A  +++   GW   A   + +A+MI   MWS  S L+Q 
Sbjct:  1142 DGFALVVDMFYIAQSASRITRALFEIVLKKGWAQLAKKILNLAKMIDSKMWSSQSPLRQF 1201

Query:  1512 PHFNADIIKRCTEKGV 1527
                +  ++ +   +G+
Sbjct:  1202 HKISPKVLNQLERRGI 1217

 Score = 84 (34.6 bits), Expect = 2.3e-80, Sum P(5) = 2.3e-80
 Identities = 30/111 (27%), Positives = 56/111 (50%)

Query:   443 YEEVHVPALKPKPMGP--DETLVPIDKL--PRYVQHAFED-FKTLNRIQSRLCKSALESD 497
             ++ + +P   P P  P  D   +PI  L  P+  +  F+  F   N IQ+++     +S+
Sbjct:  1356 FQHLILPEKYP-PCRPLLDLQPLPIQVLKDPK-AESIFKPTFSIFNAIQTQVFNCMYQSN 1413

Query:   498 ENLLLCAPTGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSL 548
             +N  + APT +GKT  A + +++   ++  A         K++Y+APM+ L
Sbjct:  1414 DNAFISAPTNSGKTVCAEIALIRCFKQNPKA---------KVVYLAPMQDL 1455

 Score = 58 (25.5 bits), Expect = 1.4e-307, Sum P(6) = 1.4e-307
 Identities = 18/68 (26%), Positives = 32/68 (47%)

Query:  1611 GWWVVIGDPKTNSLLSIKRLTLQQK---AKIKL-DFVAP--NPGHHSYALYFMSDAYLGC 1664
             GWW+++ D     +L  +  +L++K    + +L  F  P   P    Y +  +SD ++G 
Sbjct:  1289 GWWIIVEDVDGERILYFEYFSLKKKMVNGEDQLVSFTVPLSQPLPPQYYVRVISDHWIGA 1348

Query:  1665 DQEYKFSI 1672
               EY   I
Sbjct:  1349 --EYSLPI 1354

 Score = 57 (25.1 bits), Expect = 7.8e-287, Sum P(6) = 7.8e-287
 Identities = 29/120 (24%), Positives = 52/120 (43%)

Query:   263 PLDIDAYWLQRRLSKIYDDAMVSQAKAGEVLNILKSAGDDRDAENQLVLLLGYDCFDFIK 322
             P ++    L   LS + DD + +  K  E+  +LK   D   AE   +  LG    DF  
Sbjct:   156 PTEVVKGALDEILSILKDDTIRAPEKKIEISKLLKGLNDVSFAE---LTQLGKQITDF-- 210

Query:   323 MLKKYRQMILYCTLLASSQSESERQKLRDTMSEDPALAKILRQLDTGKN-EDGDANDSAD 381
                K  +       LA  Q + ++Q+  D++ ++  +A I+ + +  +N  D +  D  D
Sbjct:   211 ---KDSE-------LAKQQQQQQQQQSMDSLDDEQGVAVIIDEEEEEENLSDFEIRDDDD 260

 Score = 40 (19.1 bits), Expect = 4.9e-195, Sum P(8) = 4.9e-195
 Identities = 6/11 (54%), Positives = 10/11 (90%)

Query:   794 KIIYVAPMRSL 804
             K++Y+APM+ L
Sbjct:  1445 KVVYLAPMQDL 1455

 Score = 40 (19.1 bits), Expect = 6.5e-189, Sum P(6) = 6.5e-189
 Identities = 6/15 (40%), Positives = 10/15 (66%)

Query:  1144 TVQNLKDAVTWLGYT 1158
             ++ N +D V W+G T
Sbjct:  1565 SIANARDLVLWIGAT 1579

 Score = 38 (18.4 bits), Expect = 7.7e-285, Sum P(6) = 7.7e-285
 Identities = 9/25 (36%), Positives = 14/25 (56%)

Query:   368 TGKNEDGDANDSADARQSTS-IRHQ 391
             T + E GD N S D   +T  +++Q
Sbjct:    71 TIEKEGGDVNSSNDTYSTTKKVKNQ 95

 Score = 38 (18.4 bits), Expect = 1.5e-40, Sum P(4) = 1.5e-40
 Identities = 11/41 (26%), Positives = 19/41 (46%)

Query:  1181 DPLLECHRADLIHTAALHLERSGLIKYDRKSGHMQVTELGR 1221
             D +L   + D I      +E S L+K        ++T+LG+
Sbjct:   165 DEILSILKDDTIRAPEKKIEISKLLKGLNDVSFAELTQLGK 205


>POMBASE|SPAC9.03c [details] [associations]
            symbol:brr2 "U5 snRNP complex subunit Brr2 (predicted)"
            species:4896 "Schizosaccharomyces pombe" [GO:0000393 "spliceosomal
            conformational changes to generate catalytic conformation"
            evidence=IGI] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IDA] [GO:0005681 "spliceosomal complex"
            evidence=IDA] [GO:0005682 "U5 snRNP" evidence=ISO] [GO:0005829
            "cytosol" evidence=IDA] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
            evidence=ISO] InterPro:IPR001650 InterPro:IPR003593
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00382 SMART:SM00490 PomBase:SPAC9.03c GO:GO:0005829
            GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0005681
            GO:GO:0005682 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889 SMART:SM00611
            SMART:SM00973 eggNOG:COG1204 HOGENOM:HOG000157749 PIR:T39188
            RefSeq:NP_593346.1 ProteinModelPortal:Q9UT24 IntAct:Q9UT24
            STRING:Q9UT24 EnsemblFungi:SPAC9.03c.1 GeneID:2543676
            KEGG:spo:SPAC9.03c KO:K12854 OMA:KWDVLSR OrthoDB:EOG4MD17F
            NextBio:20804682 GO:GO:0046540 GO:GO:0004004 GO:GO:0000393
            Uniprot:Q9UT24
        Length = 2176

 Score = 1362 (484.5 bits), Expect = 0., Sum P(5) = 0.
 Identities = 259/441 (58%), Positives = 326/441 (73%)

Query:  1028 DRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQM 1087
             DR   EDLFAD  IQVLVSTATLAWGVNLPAHTVIIKGTQ+Y+PEKG W EL   DVLQM
Sbjct:   832 DRQTSEDLFADGTIQVLVSTATLAWGVNLPAHTVIIKGTQVYSPEKGIWTELSPQDVLQM 891

Query:  1088 LGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMISKLPDMLNAEIVLGTVQN 1147
             LGRAGRPQ+DT GEG++IT HSELQYYLSL+N QLP+ESQ + +L D LNAE+ LGTV++
Sbjct:   892 LGRAGRPQFDTYGEGIIITAHSELQYYLSLMNQQLPIESQFMRRLADCLNAEVSLGTVRS 951

Query:  1148 LKDAVTWLGYTYLYIRMLRAPNLYGISHDALKEDPLLECHRADLIHTAALHLERSGLIKY 1207
             ++D V WLGYTYLY+RMLR+P LY +  +   +D  L   RADL+H+AA+ LE+  L+ Y
Sbjct:   952 IEDGVDWLGYTYLYVRMLRSPALYSVGPE-YDDDKYLVQKRADLLHSAAILLEKCKLLVY 1010

Query:  1208 DRKSGHMQVTELGRIASHYYCTHETMATYNQLLKPTLSEIELFRVFSLSGEFRHITVRXX 1267
             +R+SG +  TELG++A+ YY TH +MA YN+LL  T S IELFRVFS S EF+HI VR  
Sbjct:  1011 NRQSGTLTATELGKVAASYYVTHNSMAIYNRLLMQTTSFIELFRVFSFSDEFKHIPVREE 1070

Query:  1268 XXXXXXXXXXRAPIPIKESTDEPSAKVNILLQAYISQLKLEGFALMSDMVFVTQSAARLM 1327
                       R PIPI+E  DEP+AK+N LLQ+YIS+ +L+GFAL++DMV+VTQSA R+M
Sbjct:  1071 EKVELAKLLERVPIPIRERLDEPAAKINALLQSYISRQRLDGFALVADMVYVTQSAGRIM 1130

Query:  1328 RAIFEIVLYRGWAQLADKALSLCKMVDRRMWQSMSPLRQFRXXXXXXXXXXXXXNFPWER 1387
             RAIFEI L RGW+ +A  +L  CKM+++R+W +MSPLRQF               FPW+R
Sbjct:  1131 RAIFEISLRRGWSSVATLSLDTCKMIEKRLWPTMSPLRQFPNCPSEVIRRVEKKEFPWQR 1190

Query:  1388 LYDLGPNEIGELIRVPKLGKTIHKYVHQFPKLELATHIQPITRSTLRVELTISPDFQWDE 1447
              +DL P E+GEL+ VPK G+ ++  V  FP+L +  H+QPITRS +RVEL I+  F WD+
Sbjct:  1191 YFDLDPAELGELVGVPKEGRRVYNMVQSFPRLSVEAHVQPITRSLVRVELVINSQFNWDD 1250

Query:  1448 KLHGGSEGFWILVEDVDSEAI 1468
              L G SE FWILVEDVD + +
Sbjct:  1251 HLSGTSEAFWILVEDVDGDRL 1271

 Score = 817 (292.7 bits), Expect = 0., Sum P(5) = 0.
 Identities = 203/575 (35%), Positives = 304/575 (52%)

Query:     8 QLQYEYKANSNLVLQADVRLIERRSRDEATGEVCSLVGKLEGTRMGDRFMRTKP------ 61
             Q QY Y A SNLV QAD R + RR   E TGE  SLV ++    MG R    KP      
Sbjct:    27 QSQYSYSAMSNLVTQADRRFVSRRDA-EPTGEPESLVNRVSIADMGSRARIEKPSTLPLE 85

Query:    62 IKAEERKVKRQKRDEAQYDF-----TRMKGATLLSEGVDEMVGIIYRPKTQETRQTYEVL 116
             +  E ++V+  ++D    +       R K ++ + +  D    + Y P T ETR+ Y+ +
Sbjct:    86 LTQEVQEVRLPRKDAESLEIGIRQPEREKRSSAILKYFDSFEILKYNPLTDETREVYDYI 145

Query:   117 LSFIQEALGDQPRDILCGAADEVLTVLKNDRMXXXXXXXXTENLLGS-LAEERFALLVNL 175
             LSFIQ+ LGDQ  +IL  AAD ++ +LK+  +         E +L + L ++RF+ LVNL
Sbjct:   146 LSFIQQYLGDQSPEILRSAADLIIELLKDSSLDEQGRKKQIEEVLSTELPQDRFSQLVNL 205

Query:   176 GKKITDFGAEQKSTTAEENIDDTYGINVQFXXXXXXXXXXTFXXXXXXXXXXXXXXXXXX 235
             G ++TD+  EQ+    EE ++++ G+ V F                              
Sbjct:   206 GNRLTDYTVEQEEELNEEGVNES-GVPVLFNEADEEEEAVEAMEEDEVAEDEDVVLETSI 264

Query:   236 NTAIHAENLAGGEDAEGTGRKKDK-------SLHPLDIDAYWLQRRLSKIYDDAMVSQAK 288
             +     +N+    D E T    D        ++HP +IDA+WLQR ++K + DA+V Q K
Sbjct:   265 SQEEEKKNIEN-PDTEVTFISADTKKVTEIPTVHPREIDAFWLQREIAKYFADAVVCQEK 323

Query:   289 AGEVLNILKSAGDDRDAENQLVLLLGYDCFDFIKMLKKYRQMILYCTLLASSQSESERQK 348
               +    L +  D  + EN+L+ +  Y+ F  +++L K R  I+ CT+L  + ++ ER  
Sbjct:   324 TNQAFEALSADYDLGELENELMSIFDYEHFYLVQLLTKNRWTIVSCTMLKRAATDEERLG 383

Query:   349 LRDTMSEDPALAKILRQLDTGK---NEDG--DANDSADARQSTSIRHQMXXXXXXXXXXX 403
             + + +      + IL  L  G     +DG  + N++   +   +   ++           
Sbjct:   384 VEEQIRA-AGRSWILEALRPGAITIPDDGLNELNNNVVEKAEPAPVSEIPLSKTLTSHKI 442

Query:   404 XXTRQVLDLEDLQFSSGSHFMSNKRCELPDGSFRKQRKGYEEVHVPALKPKPMGPDETLV 463
                 QV DLE+  F+ GS  MSNK  +LP+GSFR+  KGYEE+HVPA     +G DE LV
Sbjct:   443 VPKHQV-DLENYVFTEGSRLMSNKAVKLPEGSFRRTGKGYEEIHVPAPNKAVLGADERLV 501

Query:   464 PIDKLPRYVQHAFEDFKTLNRIQSRLCKSALESDENLLLCAPTGAGKTNVALLCMLQEIG 523
              I +LP +   AF + ++LNRIQS L   A  +DEN+LLCAPTGAGKTNVA+LC+L E+ 
Sbjct:   502 KIKELPEWSHQAFLNTQSLNRIQSHLYPIAFGTDENILLCAPTGAGKTNVAMLCILNELQ 561

Query:   524 KHINADGTINADEFKIIYVAPMRSLVQEMVGNFGK 558
             KH+  D + N   FKI+Y+AP+++LVQEMV NF K
Sbjct:   562 KHLREDLSFNLQNFKIVYIAPLKALVQEMVNNFSK 596

 Score = 753 (270.1 bits), Expect = 0., Sum P(5) = 0.
 Identities = 142/213 (66%), Positives = 170/213 (79%)

Query:   815 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 874
             DE+HLLHDERGPVLE+++AR  R+ E T E VRLVGLSATLPNY DVA+ L + P+ GLF
Sbjct:   654 DEVHLLHDERGPVLESIVARIFRHQEETLEQVRLVGLSATLPNYTDVASFLHVDPKKGLF 713

Query:   875 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQLLVFVHSRKETGKT 934
             YFD+++RP  L+Q++IG+TEK   KR Q  N+  YEKVM+HAG+NQ+L+FVHSRKET KT
Sbjct:   714 YFDSTYRPCPLKQEFIGITEKTPFKRMQTTNEACYEKVMQHAGKNQVLIFVHSRKETAKT 773

Query:   935 ARAIRDMCLEKDTLGQFLREGSASMEVLRTEADQVKNGELRDLLPYGFAIHHAGMTRVDR 994
             AR IRD  LE++T+G  LR  +AS E+LR EAD   +  L+DLLPYGFAIHHAGM R DR
Sbjct:   774 ARFIRDKALEEETIGHLLRSDAASREILRAEADSTSDENLKDLLPYGFAIHHAGMRREDR 833

Query:   995 TLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
                EDLFAD  IQVLVSTATLAWGVNLPAHTV+
Sbjct:   834 QTSEDLFADGTIQVLVSTATLAWGVNLPAHTVI 866

 Score = 394 (143.8 bits), Expect = 0., Sum P(5) = 0.
 Identities = 82/211 (38%), Positives = 122/211 (57%)

Query:  1470 LIQACVDVLSSNGWLSPAVAAMEVAQMITQAMWSKDSYLKQLPHFNADIIKRCTEKGVET 1529
             L+ ACVD LSS G L   +  ME++QM+TQA+W +DS LKQ+P+F+  +I+RC ++GV  
Sbjct:  1958 LLGACVDTLSSEGHLIACIRPMEMSQMVTQALWDRDSPLKQIPYFDDALIERCNKEGVHD 2017

Query:  1530 VFDIMXXXXXXXXXXXXXXXXXXADVARFCNRYPNIELSYEVLNKDRIXXXXXXXXXXXL 1589
             VFDI+                  A  A F N+YP+I++ +E+ + + +           L
Sbjct:  2018 VFDIIDLDDEKRTELLHMDNAHLAKCAEFINKYPDIDIDFEIEDSEDVHANSPSVLIVQL 2077

Query:  1590 DRE----DEVTGPVIAPFYPQKREEGWWVVIGDPKTNSLLSIKRLTLQQKAKIKLDFVAP 1645
              RE    +EV   VIAP++P ++ E WW+VI D KT  LL+IK++TL +    K++FV P
Sbjct:  2078 TRELEEDEEVDTTVIAPYFPAQKTEHWWLVISDDKT--LLAIKKITLGRSLTTKMEFVPP 2135

Query:  1646 NPGHHSYALYFMSDAYLGCDQEYKFSIDVSE 1676
               G   Y L   SD+Y+G D E +F  +V E
Sbjct:  2136 AMGTLKYKLSCFSDSYMGVDYEKEFECNVLE 2166

 Score = 386 (140.9 bits), Expect = 1.6e-298, Sum P(4) = 1.6e-298
 Identities = 79/152 (51%), Positives = 104/152 (68%)

Query:   559 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 618
             DE+HLLHDERGPVLE+++AR  R+ E T E VRLVGLSATLPNY DVA+ L + P+ GLF
Sbjct:   654 DEVHLLHDERGPVLESIVARIFRHQEETLEQVRLVGLSATLPNYTDVASFLHVDPKKGLF 713

Query:   619 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQLLVST-LRVELTIS 677
             YFD+++RP  L+Q++IG+TEK   KR Q  N+  YEKVM+HAG+NQ+L+    R E   +
Sbjct:   714 YFDSTYRPCPLKQEFIGITEKTPFKRMQTTNEACYEKVMQHAGKNQVLIFVHSRKETAKT 773

Query:   678 PDFQWDEKLHGGSEGFWILVEDVDSEVVLHHE 709
               F  D+ L   + G  +L  D  S  +L  E
Sbjct:   774 ARFIRDKALEEETIGH-LLRSDAASREILRAE 804

 Score = 349 (127.9 bits), Expect = 1.6e-231, Sum P(5) = 1.6e-231
 Identities = 91/343 (26%), Positives = 166/343 (48%)

Query:  1028 DRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQM 1087
             D+ +V+ L+    I+VL+++  + + +   ++ VI+ GTQ Y+ ++ R+++    ++LQM
Sbjct:  1663 DQNIVQYLYRHGLIKVLIASRDVIYSLKAKSNAVIVMGTQYYDGKEHRYIDYPISELLQM 1722

Query:  1088 LGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMISKLPDMLNAEIVLGTVQN 1147
             LG           + +L+T  ++ +YY   LN  LP+ES +   L D   +EI   T+++
Sbjct:  1723 LGFTASIGSSELSQVILMTVTTKKEYYKKFLNEPLPMESHLQVWLHDAFVSEISTQTIES 1782

Query:  1148 LKDAVTWLGYTYLYIRMLRAPNLYG---ISHDALKEDPLLECHRADLIHTAALHLERSGL 1204
              +DAV WL ++Y+Y R++  P  YG   I+H+++ E        +DL+ T    L  + L
Sbjct:  1783 KQDAVDWLTWSYMYRRLVANPAYYGLQDITHESVSE------FLSDLVETTMNDLSEARL 1836

Query:  1205 IKYDRKSGHMQVTELGRIASHYYCTHETMATYNQLLKPTLSEIELFRVFSLSGEFRHITV 1264
             I  D +        L  IASHY  T+ TM T+   L        L  + + + E+  + +
Sbjct:  1837 ITVDDEDDSCVALNLAMIASHYGITYITMQTFALSLSERTKMKGLLEIVTSAAEYEQLPI 1896

Query:  1265 RXXXXXXXXXXXXRAPIPIKEST-DEPSAKVNILLQAYISQLKLEGFALMSDMVFVTQSA 1323
             R            R P+ +     ++P  K  ILL A+ S+ +L    L+ D  F+    
Sbjct:  1897 RKYEDIVLERIHSRLPVRLSNPNYEDPHTKSFILLAAHFSRFELPP-GLVIDQKFILTRV 1955

Query:  1324 ARLMRAIFEIVLYRGWAQLADKALSLCKMVDRRMWQSMSPLRQ 1366
               L+ A  + +   G      + + + +MV + +W   SPL+Q
Sbjct:  1956 HNLLGACVDTLSSEGHLIACIRPMEMSQMVTQALWDRDSPLKQ 1998

 Score = 291 (107.5 bits), Expect = 1.8e-177, Sum P(6) = 1.8e-177
 Identities = 61/141 (43%), Positives = 86/141 (60%)

Query:   619 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQLLVSTLRVELTISP 678
             YFD    P  L +  +GV  K+  + + ++       V  H     +  S +RVEL I+ 
Sbjct:  1191 YFD--LDPAELGE-LVGVP-KEGRRVYNMVQSFPRLSVEAHV--QPITRSLVRVELVINS 1244

Query:   679 DFQWDEKLHGGSEGFWILVEDVDSEVVLHHEYFLLKSRYATDDHVVKFFVPVFEPLPPQY 738
              F WD+ L G SE FWILVEDVD + +LH+E F L  +Y  D+H+V F VP+ EPLPP Y
Sbjct:  1245 QFNWDDHLSGTSEAFWILVEDVDGDRLLHYEQFFLLKKYKDDEHIVNFTVPLLEPLPPCY 1304

Query:   739 FLRIVSDRWIGAETILPVSFR 759
             F++IVSDRW+ + T +P+SF+
Sbjct:  1305 FIKIVSDRWLHSITKVPLSFQ 1325

 Score = 181 (68.8 bits), Expect = 0., Sum P(5) = 0.
 Identities = 32/54 (59%), Positives = 42/54 (77%)

Query:   761 PRGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNFGK 814
             P GAGKTNVA+LC+L E+ KH+  D + N   FKI+Y+AP+++LVQEMV NF K
Sbjct:   543 PTGAGKTNVAMLCILNELQKHLREDLSFNLQNFKIVYIAPLKALVQEMVNNFSK 596

 Score = 130 (50.8 bits), Expect = 2.0e-187, Sum P(6) = 2.0e-187
 Identities = 55/232 (23%), Positives = 109/232 (46%)

Query:   801 MRSLVQEMVGNFGKDEIHLLHDERGPVLEALIARTIRNIEATQE-DVRLVGLSATLPNYK 859
             MRS+  + V  +  DE+ LL    GP+ E +I+R IR +    E ++R+VGLS ++ N +
Sbjct:  1480 MRSI--QKVDFYICDELQLLGGFYGPLYEIVISR-IRYMAVQLEKNIRVVGLSVSVANAR 1536

Query:   860 DVATLLRIKPETGLFYFDNSFRP--VALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAG 917
             D+   L   P+  +F F    RP  + +  Q   +T   +L     M+  +Y  +     
Sbjct:  1537 DLGEWLGTSPQC-IFNFSPKDRPNPLTIHLQSFSITHFPSL--MLAMSKPIYRSLKNFIS 1593

Query:   918 -RNQLLVFVHSRKETGKTARAIRDMCLEKDTLGQFLREGSASMEVLRTEA-DQVKNGELR 975
              R   +VF   RK   + A  +    +  +   ++L        ++  EA ++V++  L+
Sbjct:  1594 QRKSTIVFTPDRKVAKQLAFDLVTFSMADED--EYL------FSLMENEAFNKVEDAALQ 1645

Query:   976 DLLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
               L +G A      +  D+ +V+ L+    I+VL+++  + + +   ++ V+
Sbjct:  1646 QSLKHGIAYISEITSSNDQNIVQYLYRHGLIKVLIASRDVIYSLKAKSNAVI 1697

 Score = 98 (39.6 bits), Expect = 1.2e-74, Sum P(4) = 1.2e-74
 Identities = 34/130 (26%), Positives = 64/130 (49%)

Query:   435 SFRKQRKGYEEVHVPALKPKPMGP--DETLVPIDKL--PRYVQHAFEDFKTLNRIQSRLC 490
             S  K    ++ + +P   P P  P  D    P+  L  P ++   + +FK  N+IQ+++ 
Sbjct:  1316 SITKVPLSFQRLIMPEKFPAPT-PLLDLQNAPVSSLNNPSFIS-LYPNFKFFNKIQTQVF 1373

Query:   491 KSALESDENLLLCAPTGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLV- 549
              S  ++++++ + AP G+GKT  A L +L     H + +     D    +Y+AP++ +V 
Sbjct:  1374 NSVYKTNDSVFIGAPNGSGKTVCAELALLH----HWSQE-----DYGTAVYIAPIQEIVD 1424

Query:   550 ---QEMVGNF 556
                +E  G F
Sbjct:  1425 RRYEEWYGKF 1434

 Score = 97 (39.2 bits), Expect = 1.8e-168, Sum P(5) = 1.8e-168
 Identities = 23/75 (30%), Positives = 42/75 (56%)

Query:  1454 EGFWILVED---VDSEAIRLIQACVDVLSSNGWLSPAVAAMEVAQMITQAMWSKDSYLKQ 1510
             +GF  LV D   V   A R+++A  ++    GW S A  +++  +MI + +W   S L+Q
Sbjct:  1111 DGF-ALVADMVYVTQSAGRIMRAIFEISLRRGWSSVATLSLDTCKMIEKRLWPTMSPLRQ 1169

Query:  1511 LPHFNADIIKRCTEK 1525
              P+  +++I+R  +K
Sbjct:  1170 FPNCPSEVIRRVEKK 1184

 Score = 95 (38.5 bits), Expect = 2.0e-148, Sum P(4) = 2.0e-148
 Identities = 37/129 (28%), Positives = 62/129 (48%)

Query:   545 MRSLVQEMVGNFGKDEIHLLHDERGPVLEALIARTIRNIEATQE-DVRLVGLSATLPNYK 603
             MRS+  + V  +  DE+ LL    GP+ E +I+R IR +    E ++R+VGLS ++ N +
Sbjct:  1480 MRSI--QKVDFYICDELQLLGGFYGPLYEIVISR-IRYMAVQLEKNIRVVGLSVSVANAR 1536

Query:   604 DVATLLRIKPETGLFYFDNSFRP--VALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAG 661
             D+   L   P+  +F F    RP  + +  Q   +T   +L     M+  +Y  +     
Sbjct:  1537 DLGEWLGTSPQC-IFNFSPKDRPNPLTIHLQSFSITHFPSL--MLAMSKPIYRSLKNFIS 1593

Query:   662 -RNQLLVST 669
              R   +V T
Sbjct:  1594 QRKSTIVFT 1602

 Score = 46 (21.3 bits), Expect = 0., Sum P(5) = 0.
 Identities = 15/58 (25%), Positives = 28/58 (48%)

Query:  1610 EGWWVVIGDPKTNSLLSIKRLTLQQKAKIK---LDFVAP--NPGHHSYALYFMSDAYL 1662
             E +W+++ D   + LL  ++  L +K K     ++F  P   P    Y +  +SD +L
Sbjct:  1257 EAFWILVEDVDGDRLLHYEQFFLLKKYKDDEHIVNFTVPLLEPLPPCYFIKIVSDRWL 1314

 Score = 45 (20.9 bits), Expect = 2.0e-187, Sum P(6) = 2.0e-187
 Identities = 17/56 (30%), Positives = 27/56 (48%)

Query:   761 PRGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLV----QEMVGNF 812
             P G+GKT  A L +L     H + +     D    +Y+AP++ +V    +E  G F
Sbjct:  1388 PNGSGKTVCAELALLH----HWSQE-----DYGTAVYIAPIQEIVDRRYEEWYGKF 1434

 Score = 41 (19.5 bits), Expect = 6.7e-30, Sum P(2) = 6.7e-30
 Identities = 14/43 (32%), Positives = 21/43 (48%)

Query:   331 ILYCTLLASSQSESERQKLRDTMSEDPALAKILRQLDTGKNED 373
             I Y T+   + S SER K++  +    + A+   QL   K ED
Sbjct:  1860 ITYITMQTFALSLSERTKMKGLLEIVTSAAEY-EQLPIRKYED 1901

 Score = 39 (18.8 bits), Expect = 4.5e-178, Sum P(3) = 4.5e-178
 Identities = 12/37 (32%), Positives = 18/37 (48%)

Query:   496 SDENLLLCAPTGAGKTNVALLCMLQEIGKHINADGTI 532
             SDENL    P G    +  +    ++  + + ADGTI
Sbjct:   809 SDENLKDLLPYGFAIHHAGMRREDRQTSEDLFADGTI 845

 Score = 39 (18.8 bits), Expect = 1.3e-162, Sum P(4) = 1.3e-162
 Identities = 26/129 (20%), Positives = 51/129 (39%)

Query:  1386 ERLYDLGPNEIGELIRVPKLGKTI-H--KYVHQFPKLELATHIQPITRSTLRVELTISPD 1442
             E L+ L  NE    +    L +++ H   Y+ +         +Q + R  L   L  S D
Sbjct:  1625 EYLFSLMENEAFNKVEDAALQQSLKHGIAYISEITSSNDQNIVQYLYRHGLIKVLIASRD 1684

Query:  1443 FQWDEKLHGGSEGFWIL-VEDVDSEAIRLIQACVDVLSSNGWLSPAVAAMEVAQMITQAM 1501
               +   L   S    ++  +  D +  R I   +  L      + ++ + E++Q+I   +
Sbjct:  1685 VIYS--LKAKSNAVIVMGTQYYDGKEHRYIDYPISELLQMLGFTASIGSSELSQVILMTV 1742

Query:  1502 WSKDSYLKQ 1510
              +K  Y K+
Sbjct:  1743 TTKKEYYKK 1751

 Score = 37 (18.1 bits), Expect = 7.4e-178, Sum P(3) = 7.4e-178
 Identities = 9/26 (34%), Positives = 16/26 (61%)

Query:   946 DTLGQFLRE--GSASMEVLRTEADQV 969
             D +  F+++  G  S E+LR+ AD +
Sbjct:   143 DYILSFIQQYLGDQSPEILRSAADLI 168


>UNIPROTKB|H9L1I7 [details] [associations]
            symbol:SNRNP200 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005682 "U5 snRNP"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
            "catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR011545
            Pfam:PF00270 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GeneTree:ENSGT00640000091272
            GO:GO:0008026 EMBL:AADN02044729 EMBL:AADN02044730
            Ensembl:ENSGALT00000035545 OMA:PRKERIM Uniprot:H9L1I7
        Length = 771

 Score = 1691 (600.3 bits), Expect = 3.8e-270, Sum P(3) = 3.8e-270
 Identities = 341/561 (60%), Positives = 411/561 (73%)

Query:     1 MADAAARQLQYEYKANSNLVLQADVRLIERRSRDEATGEVCSLVGKLEGTRMGDRFMRTK 60
             MAD  AR LQYEYKANSNLVLQAD  LI+R  RDE TGEV SLVGKLEGTRMGD+  RTK
Sbjct:     1 MADVTARSLQYEYKANSNLVLQADRSLIDRTRRDEPTGEVLSLVGKLEGTRMGDKAQRTK 60

Query:    61 PIKAEERKVKRQKRDEAQYDFTRMKGATLLSEGVDEMVGIIYRPKTQETRQTYEVLLSFI 120
             P   EER+ KR+KRDE ++D   MKG TLLSEG+DEMVGIIY+PKT+ TR+TYEVLLSFI
Sbjct:    61 PQMQEERRAKRRKRDEDRHDINTMKGYTLLSEGIDEMVGIIYKPKTKVTRETYEVLLSFI 120

Query:   121 QEALGDQPRDILCGAADEVLTVLKNDRMXXXXXXXXTENLLGSLAEERFALLVNLGKKIT 180
             Q ALGDQPRDILCGAADEVL VLKN+++         + LLG   + R+ +LVNLGKKIT
Sbjct:   121 QAALGDQPRDILCGAADEVLAVLKNEKLRDKERRKEIDLLLGQTDDTRYHVLVNLGKKIT 180

Query:   181 DFGAEQKSTTAEENIDDTYGINVQFXXXXXXXXXXTFXXXXXXXXXXXXXXXXXXNTAIH 240
             D+G +++    ++NID+TYG+NVQF           +                       
Sbjct:   181 DYGGDKEIQNMDDNIDETYGVNVQFESDEEEGDEDIYGEVRDEASDDDMEGDEAVVRCTL 240

Query:   241 AENL-AGGEDAEGTGRKKDKSLHPLDIDAYWLQRRLSKIYDDAMVSQAKAGEVLNILKSA 299
             + NL A GE    + +KKD  LHP DIDA+WLQR+LS+ YDDA+VSQ KA EVL ILK+A
Sbjct:   241 SANLVASGELM--SSKKKD--LHPRDIDAFWLQRQLSRFYDDAIVSQKKADEVLEILKTA 296

Query:   300 GDDRDAENQLVLLLGYDCFDFIKMLKKYRQMILYCTLLASSQSESERQKLRDTMSEDPAL 359
              DDR+ ENQLVLLLG++ FDFIK+L+++R MILYCTLLAS+QSE+E++++   M  DP L
Sbjct:   297 SDDRECENQLVLLLGFNTFDFIKVLRQHRMMILYCTLLASAQSEAEKERIMGKMEADPEL 356

Query:   360 AKILRQLDTGKNED--GDANDSADARQSTSIRHQMXXXXXXXXXXXXXTRQVLDLEDLQF 417
             +K L QL   + ED   +     +  + + +   +              RQVLDLEDL F
Sbjct:   357 SKFLYQLHETEKEDLIREERSRRERVRQSRMDTDLETMDLDQGGEALAPRQVLDLEDLVF 416

Query:   418 SSGSHFMSNKRCELPDGSFRKQRKGYEEVHVPALKPKPMGPDETLVPIDKLPRYVQHAFE 477
             + GSHFM+NKRC+LPDGSFR+QRKGYEEVHVPALKPKP G +E LV ++KLP+Y Q  FE
Sbjct:   417 AQGSHFMANKRCQLPDGSFRRQRKGYEEVHVPALKPKPFGSEEQLVSVEKLPKYAQAGFE 476

Query:   478 DFKTLNRIQSRLCKSALESDENLLLCAPTGAGKTNVALLCMLQEIGKHINADGTINADEF 537
              FKTLNRIQS+L ++ALESDENLLLCAPTGAGKTNVAL+CML+EIGKHIN DGTIN DEF
Sbjct:   477 GFKTLNRIQSKLYRAALESDENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDEF 536

Query:   538 KIIYVAPMRSLVQEMVGNFGK 558
             KIIY+APMRSLVQEMVG+FGK
Sbjct:   537 KIIYIAPMRSLVQEMVGSFGK 557

 Score = 697 (250.4 bits), Expect = 3.8e-270, Sum P(3) = 3.8e-270
 Identities = 132/157 (84%), Positives = 146/157 (92%)

Query:   815 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 874
             DEIHLLHD+RGPVLE+L+AR IRNIE TQEDVRLVGLSATLPNY+DVAT LR+ P  GLF
Sbjct:   615 DEIHLLHDDRGPVLESLVARAIRNIEMTQEDVRLVGLSATLPNYEDVATFLRVDPAKGLF 674

Query:   875 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQLLVFVHSRKETGKT 934
             YFDNSFRPV LEQ Y+G+TEKKA+KRFQ+MN+IVYEK+MEHAG+NQ+LVFVHSRKETGKT
Sbjct:   675 YFDNSFRPVPLEQTYVGITEKKAIKRFQIMNEIVYEKIMEHAGKNQVLVFVHSRKETGKT 734

Query:   935 ARAIRDMCLEKDTLGQFLREGSASMEVLRTEADQVKN 971
             ARAIRDMCLEKDTLG FLREGSAS EVLRTEA+Q KN
Sbjct:   735 ARAIRDMCLEKDTLGLFLREGSASTEVLRTEAEQCKN 771

 Score = 478 (173.3 bits), Expect = 2.8e-222, Sum P(2) = 2.8e-222
 Identities = 88/109 (80%), Positives = 101/109 (92%)

Query:   559 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 618
             DEIHLLHD+RGPVLE+L+AR IRNIE TQEDVRLVGLSATLPNY+DVAT LR+ P  GLF
Sbjct:   615 DEIHLLHDDRGPVLESLVARAIRNIEMTQEDVRLVGLSATLPNYEDVATFLRVDPAKGLF 674

Query:   619 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQLLV 667
             YFDNSFRPV LEQ Y+G+TEKKA+KRFQ+MN+IVYEK+MEHAG+NQ+LV
Sbjct:   675 YFDNSFRPVPLEQTYVGITEKKAIKRFQIMNEIVYEKIMEHAGKNQVLV 723

 Score = 251 (93.4 bits), Expect = 3.8e-270, Sum P(3) = 3.8e-270
 Identities = 47/54 (87%), Positives = 51/54 (94%)

Query:   761 PRGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNFGK 814
             P GAGKTNVAL+CML+EIGKHIN DGTIN DEFKIIY+APMRSLVQEMVG+FGK
Sbjct:   504 PTGAGKTNVALMCMLREIGKHINMDGTINVDEFKIIYIAPMRSLVQEMVGSFGK 557

 Score = 37 (18.1 bits), Expect = 1.9e-200, Sum P(3) = 1.9e-200
 Identities = 8/29 (27%), Positives = 15/29 (51%)

Query:   964 TEADQVKNGELRDLLPYGFAIHHAGMTRV 992
             TE   +K  ++ + + Y   + HAG  +V
Sbjct:   693 TEKKAIKRFQIMNEIVYEKIMEHAGKNQV 721


>CGD|CAL0001532 [details] [associations]
            symbol:orf19.3098 species:5476 "Candida albicans" [GO:0005682
            "U5 snRNP" evidence=IEA] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
            evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=IEA] [GO:0000388 "spliceosome conformational change to
            release U4 (or U4atac) and U1 (or U11)" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00490 CGD:CAL0001532 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
            eggNOG:COG1204 KO:K12854 GO:GO:0008026 EMBL:AACQ01000086
            EMBL:AACQ01000085 RefSeq:XP_715407.1 RefSeq:XP_715477.1
            ProteinModelPortal:Q5A0Z8 STRING:Q5A0Z8 GeneID:3642881
            GeneID:3642903 KEGG:cal:CaO19.10610 KEGG:cal:CaO19.3098
            Uniprot:Q5A0Z8
        Length = 1987

 Score = 1121 (399.7 bits), Expect = 3.1e-238, Sum P(6) = 3.1e-238
 Identities = 213/455 (46%), Positives = 304/455 (66%)

Query:  1017 WGVNLPAHTVVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRW 1076
             +G++    T  DR +VEDLFA  +++VLVSTATLAWGVNLPAHTVIIKGT+ Y+PE G W
Sbjct:   667 FGIHHAGLTKKDRGVVEDLFAQGYLRVLVSTATLAWGVNLPAHTVIIKGTETYSPESGAW 726

Query:  1077 VELGALDVLQMLGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMISKLPDML 1136
             V+L   D+LQMLGRAGRP+YD  GEG++IT+  E+QYYL++LN QLP+ESQ+I KL D +
Sbjct:   727 VQLSPQDILQMLGRAGRPRYDKNGEGIIITSQDEVQYYLAILNQQLPIESQLIHKLVDNI 786

Query:  1137 NAEIVLGTVQNLKDAVTWLGYTYLYIRMLRAPNLYGI--SHDALKEDPLLECHRADLIHT 1194
             NAEIV G++  +++ + WL YTY ++RML++P LYG+  ++D    DP L   RADLI+T
Sbjct:   787 NAEIVAGSITTIEEGIEWLTYTYFFVRMLQSPALYGVEATYD-FTNDPTLYNRRADLIYT 845

Query:  1195 AALHLERSGLIKYDRKSGHMQVTELGRIASHYYCTHETMATYNQLLKPTLSEIELFRVFS 1254
             A   L  + L+ Y+   G +  TELG+IASH+Y   ET+  Y ++LKP  SE ++  VFS
Sbjct:   846 AFCILHENKLVVYNAALGSVASTELGKIASHFYINFETINLYGKMLKPWHSETDILSVFS 905

Query:  1255 LSGEFRHITVRXXXXXXXXXXXXRAPIPIKESTDEPSAKVNILLQAYISQLKLEGFALMS 1314
              SGEF+++ VR            + PIPIKE  +EP AK+NILLQ +IS+L LEG+AL++
Sbjct:   906 NSGEFKYVPVRQEERLEISKLMEKCPIPIKEQPNEPLAKINILLQTFISRLSLEGYALIA 965

Query:  1315 DMVFVTQSAARLMRAIFEIVLYRGWAQLADKALSLCKMVDRRMWQSMSPLRQFRXXX-XX 1373
             DM+++TQSA RL+RA++EI L + W+ LA   L+LCKMVD+R+W + SPLRQF       
Sbjct:   966 DMIYITQSAGRLLRALYEIALLQKWSSLAKSILNLCKMVDKRLWLNNSPLRQFGDVVPHQ 1025

Query:  1374 XXXXXXXXNFPWERLYDLGPNEIGELIRVPKLGKTIHKYVHQFPKLELATHIQPITRSTL 1433
                     + PW R + L P+E+   + +    +   +Y+  FPK+ +   +QPIT   L
Sbjct:  1026 IIRASEMSHLPWIRYFHLNPDELAVALNLKGNAQIAKQYIDSFPKVSIQYMVQPITEQFL 1085

Query:  1434 RVELTISPDFQWDEKLHGGSEGFWILVEDVDSEAI 1468
             R+++ + P++ W   +HG  E F + +E  D   +
Sbjct:  1086 RIQVEVIPEWSWISAIHGSQEIFNVFLEGCDGNKL 1120

 Score = 611 (220.1 bits), Expect = 3.1e-238, Sum P(6) = 3.1e-238
 Identities = 123/214 (57%), Positives = 161/214 (75%)

Query:   815 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 874
             DEIHLLHDERGPVLE+L++R IR  E T  D+R+VGLSATLPNY DVA  +R KPE GLF
Sbjct:   506 DEIHLLHDERGPVLESLVSRAIRKSETTGSDIRIVGLSATLPNYADVAKFIRAKPE-GLF 564

Query:   875 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHA-GRNQLLVFVHSRKETGK 933
             YFD S+RP  LEQ YIGV E+KA+KR   MN+  Y+++ +    R+QL++FVHSRKET  
Sbjct:   565 YFDASYRPCPLEQVYIGVKEQKAIKRIAAMNEACYDRMHQSLQDRHQLIIFVHSRKETFT 624

Query:   934 TARAIRDMCLEKDTLGQFLREGSASMEVLRTEADQVKNGELRDLLPYGFAIHHAGMTRVD 993
             TA+ + +  L+ D + Q   EG    E+L+ E + + N +L++++P GF IHHAG+T+ D
Sbjct:   625 TAKYLMEK-LDIDIVEQ---EGVK--EILKQEGESMSNPKLKEVIPRGFGIHHAGLTKKD 678

Query:   994 RTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
             R +VEDLFA  +++VLVSTATLAWGVNLPAHTV+
Sbjct:   679 RGVVEDLFAQGYLRVLVSTATLAWGVNLPAHTVI 712

 Score = 394 (143.8 bits), Expect = 3.1e-238, Sum P(6) = 3.1e-238
 Identities = 78/217 (35%), Positives = 127/217 (58%)

Query:  1461 EDVDSEAIRLIQACVDVLSSNGWLSPAVAAMEVAQMITQAMWSKDSYLKQLPHFNADIIK 1520
             + V +  ++++ A +D+LSS+G L+  + AM+++QMI QA+WS D+ L+Q+P F  +I+ 
Sbjct:  1773 KSVLTRVLQILNAAIDILSSDGSLN-VLLAMDLSQMIVQAVWSSDNPLRQVPRFTNEILA 1831

Query:  1521 RCTEKGVETVFDIMXXXXXXXXXXXXXXXXXXADVARFCNRYPNIELSYEVLNKDRIXXX 1580
             RCT+  VETV+DIM                   +VA F N YPNIELSYE+  K  +   
Sbjct:  1832 RCTQHNVETVYDIMSLEDEERNEILQLPDQELNEVASFVNSYPNIELSYEM--KGGVTSN 1889

Query:  1581 XXXXXXXXLDREDEVTGPVIAPF--YPQKREEGWWVVIGDPKTNSLLSIKRLTLQQKAK- 1637
                     +DR++E+    +     +P  ++E WW+V+GD KT  L  IK++ +Q+ ++ 
Sbjct:  1890 ESKFVTVTIDRDEEIESLEVVKNENFPVTKQENWWIVVGDSKTRHLYGIKKVNIQKISQS 1949

Query:  1638 IKLDFVAPNPGHHSYALYFMSDAYLGCDQEYKFSIDV 1674
              +++F  PN G H   +Y + D+YL  D+E +F IDV
Sbjct:  1950 FEIEFTIPNKGKHELTIYLICDSYLDADKEMEFVIDV 1986

 Score = 342 (125.4 bits), Expect = 5.5e-210, Sum P(6) = 5.5e-210
 Identities = 67/110 (60%), Positives = 84/110 (76%)

Query:   559 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 618
             DEIHLLHDERGPVLE+L++R IR  E T  D+R+VGLSATLPNY DVA  +R KPE GLF
Sbjct:   506 DEIHLLHDERGPVLESLVSRAIRKSETTGSDIRIVGLSATLPNYADVAKFIRAKPE-GLF 564

Query:   619 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHA-GRNQLLV 667
             YFD S+RP  LEQ YIGV E+KA+KR   MN+  Y+++ +    R+QL++
Sbjct:   565 YFDASYRPCPLEQVYIGVKEQKAIKRIAAMNEACYDRMHQSLQDRHQLII 614

 Score = 293 (108.2 bits), Expect = 3.1e-238, Sum P(6) = 3.1e-238
 Identities = 63/151 (41%), Positives = 95/151 (62%)

Query:   408 QVLDLEDLQFSSGSHFMSNKRCELPDGSFRKQRKGYEEVHVPALKPKPMGPDETLVPIDK 467
             Q + L+ + FS+    + N R  LP+G+  + +K Y+ + VPA   + +  ++ L+PI  
Sbjct:   302 QKISLDRIVFSTS---VENARVTLPEGTIHEVKKSYDTITVPA-PAQSLSDNDELLPIST 357

Query:   468 LPRYVQHAFE--DFKTLNRIQSRLCKSALESDENLLLCAPTGAGKTNVALLCMLQEIGKH 525
             LP + Q AF   +  T NRIQS++   A E+D NLL+CAPTGAGKTNVA+L +L+ I   
Sbjct:   358 LPDWAQEAFPKTETTTFNRIQSKIYNQAFETDNNLLICAPTGAGKTNVAMLTILRTIENF 417

Query:   526 INADGTINADEFKIIYVAPMRSLVQEMVGNF 556
              N +G I    FKI+Y+AP+++LVQE +  F
Sbjct:   418 RN-NGHIQLKNFKIVYIAPLKALVQEQMREF 447

 Score = 292 (107.8 bits), Expect = 1.8e-106, Sum P(5) = 1.8e-106
 Identities = 107/427 (25%), Positives = 199/427 (46%)

Query:  1027 VDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQ 1086
             VDR +VE LF  + I VL  T   +      A+ V + GT++Y+  + R+++    D+ +
Sbjct:  1493 VDRLIVERLFESKSIGVLFCTMDTSKFAPT-ANNVFVAGTRVYDGHEHRFLDYPLNDLYE 1551

Query:  1087 MLGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMISKLPDMLNAEIVLGTVQ 1146
             M+G          G   + T    +++Y S LN  L VES + + L +     +  G ++
Sbjct:  1552 MVGCC-----QDGGVVHIYTTSQMVEFYSSFLNSGLAVESLLSNSLHEFFMDAVANGIIK 1606

Query:  1147 NLKDAVTWLGYTYLYIRMLRAPNLYGISHDALKEDPLLECHRADLIHTAALHLERSGLIK 1206
               ++ +  L +T+ Y R+L+ P+ Y +   +   +  +  + ++LI +      +   I+
Sbjct:  1607 QRQNCIDVLTFTFFYRRLLKNPSFYDLKEVS---NSGISTYLSELIESVFDDFNKEEFIE 1663

Query:  1207 YDRKSGHMQVTELGRIASHYYCTHETMATYNQLL-KPTLSEIELFRVFSLSGEFRHITVR 1265
              + +   +       IASHY  T ET++  ++L  K  L +I  F   + + EF  + VR
Sbjct:  1664 EEDEGDTISPLNKIVIASHYNSTFETVSNLSKLSNKSKLKDI--FHALTNATEFSDLPVR 1721

Query:  1266 XXXXXXXXXXXXRAPIPIKESTDE---PSAKVNILLQAYISQLKLEGFALMSDMVFVTQS 1322
                         +  +PIK S D+   P  K  ILLQA+IS++ +  F L  D   V   
Sbjct:  1722 EGEDALLIKLQTK--LPIKYSQDDYESPFFKAFILLQAHISRISIP-FDLRQDQKSVLTR 1778

Query:  1323 AARLMRAIFEIVLYRGWAQLADKALSLCKMVDRRMWQSMSPLRQFRXXXXXXXXXXXXXN 1382
               +++ A  +I+   G   +   A+ L +M+ + +W S +PLRQ               N
Sbjct:  1779 VLQILNAAIDILSSDGSLNVL-LAMDLSQMIVQAVWSSDNPLRQVPRFTNEILARCTQHN 1837

Query:  1383 FPWERLYD---LGPNEIGELIRVP--KLGKTIHKYVHQFPKLELATHIQP-ITRSTLR-V 1435
                E +YD   L   E  E++++P  +L + +  +V+ +P +EL+  ++  +T +  + V
Sbjct:  1838 V--ETVYDIMSLEDEERNEILQLPDQELNE-VASFVNSYPNIELSYEMKGGVTSNESKFV 1894

Query:  1436 ELTISPD 1442
              +TI  D
Sbjct:  1895 TVTIDRD 1901

 Score = 165 (63.1 bits), Expect = 6.7e-109, Sum P(8) = 6.7e-109
 Identities = 27/79 (34%), Positives = 46/79 (58%)

Query:   670 LRVELTISPDFQWDEKLHGGSEGFWILVEDVDSEVVLHHEYFLLKSRYATDDHVVKFFVP 729
             LR+++ + P++ W   +HG  E F + +E  D   +LH E F++K +     H+++FFVP
Sbjct:  1085 LRIQVEVIPEWSWISAIHGSQEIFNVFLEGCDGNKLLHSEQFIVKRKNINKPHILEFFVP 1144

Query:   730 VFEPLPPQYFLRIVSDRWI 748
                P  P Y L  VS++W+
Sbjct:  1145 FVAPPLPNYILSFVSEKWV 1163

 Score = 139 (54.0 bits), Expect = 6.7e-109, Sum P(8) = 6.7e-109
 Identities = 58/205 (28%), Positives = 108/205 (52%)

Query:   815 DEIHLLHDERGPVLEALIARTIRNIEATQED--VRLVGLSATLPNYKDVATLLRI-KPET 871
             D++HL+  +     E L+ R +R + +  +D  +R+V LS+ + N +D+A  + + K ET
Sbjct:  1331 DDLHLVGSDVH--YEMLVTR-VRMLTSQWDDYKLRIVALSSPVLNSRDIAEWIGVAKSET 1387

Query:   872 GLFYFDNSFRPVALEQQYIGVTEKKALKRFQVMNDI-VYEKVME-HAGRNQLLVFVHSRK 929
                 F+  F P + E +   +TE K L      N + +Y+ + + ++G    L+F  S  
Sbjct:  1388 ----FN--FAPHSRENR---ITEIK-LSVESSDNTVKIYKDLAKVNSGLRNTLIFAPSYI 1437

Query:   930 ETGKTARAIRDMCLEKDTLGQFLREGSASMEVLRTEA--DQVKNGELRDLLPYGFAIHHA 987
                + A ++    +E +   ++      S+++L+ E    +++N  L++LLP G A+ ++
Sbjct:  1438 HAFEMAHSM----VENNQAQEW-----RSVDLLKLEKYISKIQNPLLKNLLPKGIAVFYS 1488

Query:   988 GMTRVDRTLVEDLFADRHIQVLVST 1012
             GM RVDR +VE LF  + I VL  T
Sbjct:  1489 GMARVDRLIVERLFESKSIGVLFCT 1513

 Score = 125 (49.1 bits), Expect = 1.4e-220, Sum P(6) = 1.4e-220
 Identities = 26/52 (50%), Positives = 36/52 (69%)

Query:   761 PRGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNF 812
             P GAGKTNVA+L +L+ I    N +G I    FKI+Y+AP+++LVQE +  F
Sbjct:   397 PTGAGKTNVAMLTILRTIENFRN-NGHIQLKNFKIVYIAPLKALVQEQMREF 447

 Score = 68 (29.0 bits), Expect = 1.5e-43, Sum P(5) = 1.5e-43
 Identities = 28/108 (25%), Positives = 48/108 (44%)

Query:   445 EVHVPALKPKPMGPDETLVPIDKLPRYVQHAFEDFKTLNRIQSRLCKSALESDENLLLCA 504
             +V  P + P  +  +  LVP +     V   F  F   N++QS    +   S+ N+ + +
Sbjct:  1175 DVISPKVSPHYLDNNVDLVPTET----VGDLFP-FTHFNKLQSSTFDTVYNSENNVFIGS 1229

Query:   505 PTGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEM 552
               G GKT +A L +L       N  G       +I+Y+ P + LV ++
Sbjct:  1230 SKGDGKTVLAELAILNHWN---NKKG-------RIVYINPCQELVDKL 1267

 Score = 65 (27.9 bits), Expect = 7.8e-83, Sum P(5) = 7.8e-83
 Identities = 16/66 (24%), Positives = 35/66 (53%)

Query:  1454 EGFWILVEDV--DSEAIRLIQACVDVLSSNGWLSPAVAAMEVAQMITQAMWSKDSYLKQ- 1510
             EG+ ++ + +     A RL++A  ++     W S A + + + +M+ + +W  +S L+Q 
Sbjct:   959 EGYALIADMIYITQSAGRLLRALYEIALLQKWSSLAKSILNLCKMVDKRLWLNNSPLRQF 1018

Query:  1511 ---LPH 1513
                +PH
Sbjct:  1019 GDVVPH 1024

 Score = 59 (25.8 bits), Expect = 3.1e-238, Sum P(6) = 3.1e-238
 Identities = 23/96 (23%), Positives = 43/96 (44%)

Query:   111 QTYEVLLSFIQEALGDQPRDILCGAADEVLTVLKNDRMXXXXXXXXTENLLG-SLAEERF 169
             Q YE+ ++ I+  L D   +++  A++     L N  +         E LL  S++++  
Sbjct:    61 QLYELFVTKIRSYLPDSSHEVIQSASEVASEQLSNRDISVPEKRKELEELLNASISDDDL 120

Query:   170 ALLVNLGKKITDFGAEQKSTTAEENIDDTYGINVQF 205
               L+NL   I    A+Q     + N DD + + + F
Sbjct:   121 HELINLSNSIES--AKQNHQ--QGNGDDEF-VAIDF 151

 Score = 58 (25.5 bits), Expect = 3.1e-238, Sum P(6) = 3.1e-238
 Identities = 31/143 (21%), Positives = 64/143 (44%)

Query:   238 AIHAE-NLAGGEDAEGTGRKKDKSLHPLDIDAYWLQRRLSKIYDDAMVSQAKAGEVLNIL 296
             AI AE  +    D E    +   + HP   D +WLQ+ +S+        +    +V ++L
Sbjct:   160 AIEAEIEVEDESDKETDTEEPTSNEHPKAYDWHWLQQ-ISEF-------KHYGSQVFDLL 211

Query:   297 KSAG-DDRDAENQLVLLLGYDCFDFIKMLKKYRQMILYCTLLASSQSESERQKLRDTMSE 355
                  D    +++L  LL     DFI    ++R  I++   L   Q+E++   +++   E
Sbjct:   212 ADKDLDSLQLDSKLNELLDSKGMDFIVKCIEHRWRIVFSKRL---QTENKEPVIKEM--E 266

Query:   356 DPALAKILRQLDTGKNEDGDAND 378
             +  L  ++ +L   ++ D + ++
Sbjct:   267 ELGLHSLINELHRKRSLDDETSN 289

 Score = 57 (25.1 bits), Expect = 2.9e-58, Sum P(5) = 2.9e-58
 Identities = 18/60 (30%), Positives = 35/60 (58%)

Query:   559 DEIHLLHDERGPVLEALIARTIRNIEATQED--VRLVGLSATLPNYKDVATLLRI-KPET 615
             D++HL+  +     E L+ R +R + +  +D  +R+V LS+ + N +D+A  + + K ET
Sbjct:  1331 DDLHLVGSDVH--YEMLVTR-VRMLTSQWDDYKLRIVALSSPVLNSRDIAEWIGVAKSET 1387

 Score = 40 (19.1 bits), Expect = 2.3e-99, Sum P(7) = 2.3e-99
 Identities = 19/71 (26%), Positives = 28/71 (39%)

Query:   867 IKPETGLFYFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQLLVFVH 926
             I P+    Y DN+   V  E   +G  +      F  +    ++ V  +   N   VF+ 
Sbjct:  1177 ISPKVSPHYLDNNVDLVPTET--VG--DLFPFTHFNKLQSSTFDTV--YNSENN--VFIG 1228

Query:   927 SRKETGKTARA 937
             S K  GKT  A
Sbjct:  1229 SSKGDGKTVLA 1239

 Score = 38 (18.4 bits), Expect = 6.7e-109, Sum P(8) = 6.7e-109
 Identities = 14/47 (29%), Positives = 23/47 (48%)

Query:   762 RGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEM 808
             +G GKT +A L +L       N  G       +I+Y+ P + LV ++
Sbjct:  1231 KGDGKTVLAELAILNHWN---NKKG-------RIVYINPCQELVDKL 1267


>UNIPROTKB|C9JAQ9 [details] [associations]
            symbol:SNRNP200 "U5 small nuclear ribonucleoprotein 200 kDa
            helicase" species:9606 "Homo sapiens" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=IDA] InterPro:IPR011545 Pfam:PF00270 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003676 InterPro:IPR004179 Pfam:PF02889
            HOGENOM:HOG000157749 GO:GO:0008026 EMBL:AC021188 HGNC:HGNC:30859
            ChiTaRS:SNRNP200 IPI:IPI01018841 ProteinModelPortal:C9JAQ9
            SMR:C9JAQ9 STRING:C9JAQ9 Ensembl:ENST00000349783
            ArrayExpress:C9JAQ9 Bgee:C9JAQ9 Uniprot:C9JAQ9
        Length = 625

 Score = 1701 (603.8 bits), Expect = 6.1e-225, Sum P(3) = 6.1e-225
 Identities = 340/561 (60%), Positives = 414/561 (73%)

Query:     1 MADAAARQLQYEYKANSNLVLQADVRLIERRSRDEATGEVCSLVGKLEGTRMGDRFMRTK 60
             MAD  AR LQYEYKANSNLVLQAD  LI+R  RDE TGEV SLVGKLEGTRMGD+  RTK
Sbjct:     1 MADVTARSLQYEYKANSNLVLQADRSLIDRTRRDEPTGEVLSLVGKLEGTRMGDKAQRTK 60

Query:    61 PIKAEERKVKRQKRDEAQYDFTRMKGATLLSEGVDEMVGIIYRPKTQETRQTYEVLLSFI 120
             P   EER+ KR+KRDE ++D  +MKG TLLSEG+DEMVGIIY+PKT+ETR+TYEVLLSFI
Sbjct:    61 PQMQEERRAKRRKRDEDRHDINKMKGYTLLSEGIDEMVGIIYKPKTKETRETYEVLLSFI 120

Query:   121 QEALGDQPRDILCGAADEVLTVLKNDRMXXXXXXXXTENLLGSLAEERFALLVNLGKKIT 180
             Q ALGDQPRDILCGAADEVL VLKN+++         + LLG   + R+ +LVNLGKKIT
Sbjct:   121 QAALGDQPRDILCGAADEVLAVLKNEKLRDKERRKEIDLLLGQTDDTRYHVLVNLGKKIT 180

Query:   181 DFGAEQKSTTAEENIDDTYGINVQFXXXXXXXXXXTFXXXXXXXXXXXXXXXXXXNTAIH 240
             D+G +++    ++NID+TYG+NVQF           +                       
Sbjct:   181 DYGGDKEIQNMDDNIDETYGVNVQFESDEEEGDEDVYGEVREEASDDDMEGDEAVVRCTL 240

Query:   241 AENL-AGGEDAEGTGRKKDKSLHPLDIDAYWLQRRLSKIYDDAMVSQAKAGEVLNILKSA 299
             + NL A GE    + +KKD  LHP DIDA+WLQR+LS+ YDDA+VSQ KA EVL ILK+A
Sbjct:   241 SANLVASGELM--SSKKKD--LHPRDIDAFWLQRQLSRFYDDAIVSQKKADEVLEILKTA 296

Query:   300 GDDRDAENQLVLLLGYDCFDFIKMLKKYRQMILYCTLLASSQSESERQKLRDTMSEDPAL 359
              DDR+ ENQLVLLLG++ FDFIK+L+++R MILYCTLLAS+QSE+E++++   M  DP L
Sbjct:   297 SDDRECENQLVLLLGFNTFDFIKVLRQHRMMILYCTLLASAQSEAEKERIMGKMEADPEL 356

Query:   360 AKILRQLDTGKNED--GDANDSADARQSTSIRHQMXXXXXXXXXXXXXTRQVLDLEDLQF 417
             +K L QL   + ED   +     +  + + +   +              RQVLDLEDL F
Sbjct:   357 SKFLYQLHETEKEDLIREERSRRERVRQSRMDTDLETMDLDQGGEALAPRQVLDLEDLVF 416

Query:   418 SSGSHFMSNKRCELPDGSFRKQRKGYEEVHVPALKPKPMGPDETLVPIDKLPRYVQHAFE 477
             + GSHFM+NKRC+LPDGSFR+QRKGYEEVHVPALKPKP G +E L+P++KLP+Y Q  FE
Sbjct:   417 TQGSHFMANKRCQLPDGSFRRQRKGYEEVHVPALKPKPFGSEEQLLPVEKLPKYAQAGFE 476

Query:   478 DFKTLNRIQSRLCKSALESDENLLLCAPTGAGKTNVALLCMLQEIGKHINADGTINADEF 537
              FKTLNRIQS+L ++ALE+DENLLLCAPTGAGKTNVAL+CML+EIGKHIN DGTIN D+F
Sbjct:   477 GFKTLNRIQSKLYRAALETDENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDF 536

Query:   538 KIIYVAPMRSLVQEMVGNFGK 558
             KIIY+APMRSLVQEMVG+FGK
Sbjct:   537 KIIYIAPMRSLVQEMVGSFGK 557

 Score = 262 (97.3 bits), Expect = 6.1e-225, Sum P(3) = 6.1e-225
 Identities = 49/67 (73%), Positives = 57/67 (85%)

Query:  1618 DPKTNSLLSIKRLTLQQKAKIKLDFVAPNPGHHSYALYFMSDAYLGCDQEYKFSIDVSEY 1677
             D K+NSL+SIKRLTLQQKAK+KLDFVAP  G H+Y LYFMSDAY+GCDQEYKFS+DV E 
Sbjct:   559 DAKSNSLISIKRLTLQQKAKVKLDFVAPATGAHNYTLYFMSDAYMGCDQEYKFSVDVKEA 618

Query:  1678 YSGGESD 1684
              +  +SD
Sbjct:   619 ETDSDSD 625

 Score = 248 (92.4 bits), Expect = 6.1e-225, Sum P(3) = 6.1e-225
 Identities = 46/54 (85%), Positives = 51/54 (94%)

Query:   761 PRGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNFGK 814
             P GAGKTNVAL+CML+EIGKHIN DGTIN D+FKIIY+APMRSLVQEMVG+FGK
Sbjct:   504 PTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIYIAPMRSLVQEMVGSFGK 557


>SGD|S000000974 [details] [associations]
            symbol:BRR2 "RNA-dependent ATPase RNA helicase (DEIH box)"
            species:4932 "Saccharomyces cerevisiae" [GO:0005682 "U5 snRNP"
            evidence=IDA] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
            evidence=IDA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=IDA;IMP] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
            "mRNA processing" evidence=IEA] [GO:0005681 "spliceosomal complex"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0000388 "spliceosome
            conformational change to release U4 (or U4atac) and U1 (or U11)"
            evidence=IMP] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 SGD:S000000974
            GO:GO:0005524 GO:GO:0005681 GO:GO:0005682 GO:GO:0003676
            EMBL:BK006939 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GeneTree:ENSGT00700000104562 InterPro:IPR004179 Pfam:PF02889
            SMART:SM00611 SMART:SM00973 eggNOG:COG1204 HOGENOM:HOG000157749
            EMBL:U18922 KO:K12854 OrthoDB:EOG4MD17F GO:GO:0046540 GO:GO:0004004
            PIR:S50675 RefSeq:NP_011099.1 PDB:3HIB PDB:3IM1 PDB:3IM2
            PDBsum:3HIB PDBsum:3IM1 PDBsum:3IM2 ProteinModelPortal:P32639
            SMR:P32639 DIP:DIP-850N IntAct:P32639 MINT:MINT-606933
            STRING:P32639 PaxDb:P32639 EnsemblFungi:YER172C GeneID:856919
            KEGG:sce:YER172C CYGD:YER172c OMA:RDTHESS EvolutionaryTrace:P32639
            NextBio:983377 Genevestigator:P32639 GermOnline:YER172C
            GO:GO:0000388 Uniprot:P32639
        Length = 2163

 Score = 1141 (406.7 bits), Expect = 2.2e-221, Sum P(5) = 2.2e-221
 Identities = 241/544 (44%), Positives = 335/544 (61%)

Query:   933 KTARAIRDMCLEKDTLGQFLREGS-------ASMEVLRTEADQVKNGELRDLLPYGFAIH 985
             K  +A+ D C EK  L + + EG+       +  E  RT A  +KN    + + +    +
Sbjct:   717 KKLKAMNDACYEK-VL-ESINEGNQIIVFVHSRKETSRT-ATWLKNKFAEENITHKLTKN 773

Query:   986 HAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVVDRTLVEDLFADRHIQVLV 1045
              AG  ++ +T   ++  D  ++ L+ +     G +    T  DR+L EDLFAD  +QVLV
Sbjct:   774 DAGSKQILKTEAANVL-DPSLRKLIESGI---GTHHAGLTRSDRSLSEDLFADGLLQVLV 829

Query:  1046 STATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQMLGRAGRPQYDTKGEGVLI 1105
              TATLAWGVNLPAHTVIIKGT +Y+PEKG W +L   DVLQMLGRAGRP+YDT GEG++I
Sbjct:   830 CTATLAWGVNLPAHTVIIKGTDVYSPEKGSWEQLSPQDVLQMLGRAGRPRYDTFGEGIII 889

Query:  1106 TNHSELQYYLSLLNHQLPVESQMISKLPDMLNAEIVLGTVQNLKDAVTWLGYTYLYIRML 1165
             T+ S +QYYLS+LN QLP+ESQ +SKL D LNAE+V G ++   DAV WL YTYLY+RML
Sbjct:   890 TDQSNVQYYLSVLNQQLPIESQFVSKLVDNLNAEVVAGNIKCRNDAVNWLAYTYLYVRML 949

Query:  1166 RAPNLYGISHDALKEDPLLECHRADLIHTAALHLERSGLIKYDRKSGHMQVTELGRIASH 1225
              +P LY +    +  D  L+  R  L+H+A   L+   L+ YD ++  ++ T+LG IAS 
Sbjct:   950 ASPMLYKVPD--ISSDGQLKKFRESLVHSALCILKEQELVLYDAENDVIEATDLGNIASS 1007

Query:  1226 YYCTHETMATYNQLLKPTLSEIELFRVFSLSGEFRHITVRXXXXXXXXXXXXRAPIPIKE 1285
             +Y  H +M  YN+ L    ++I+LFR+FS+S EF++++VR            +APIPI+E
Sbjct:  1008 FYINHASMDVYNRELDEHTTQIDLFRIFSMSEEFKYVSVRYEEKRELKQLLEKAPIPIRE 1067

Query:  1286 STDEPSAKVNILLQAYISQLKLEGFALMSDMVFVTQSAARLMRAIFEIVLYRGWAQLADK 1345
               D+P AKVN+LLQ+Y SQLK EGFAL SD+VF+ Q+A RL+RA+FEI L RGW      
Sbjct:  1068 DIDDPLAKVNVLLQSYFSQLKFEGFALNSDIVFIHQNAGRLLRAMFEICLKRGWGHPTRM 1127

Query:  1346 ALSLCKMVDRRMWQSMSPLRQFRXXXXXXXXXXXXXNFPWERLYDLG-PNEIGELIRVPK 1404
              L+LCK    +MW +  PLRQF+               PW     L  P E+G  IR  K
Sbjct:  1128 LLNLCKSATTKMWPTNCPLRQFKTCPVEVIKRLEASTVPWGDYLQLETPAEVGRAIRSEK 1187

Query:  1405 LGKTIHKYVHQFPKLELATHIQPITRSTLRVELTISPDFQWDEKLHGGSEGFWILVEDVD 1464
              GK ++  + +FPK+ +  + QPITRS +R  + I  D+ WD  +HG  E F +++ED D
Sbjct:  1188 YGKQVYDLLKRFPKMSVTCNAQPITRSVMRFNIEIIADWIWDMNVHGSLEPFLLMLEDTD 1247

Query:  1465 SEAI 1468
              ++I
Sbjct:  1248 GDSI 1251

 Score = 597 (215.2 bits), Expect = 1.8e-126, Sum P(5) = 1.8e-126
 Identities = 117/214 (54%), Positives = 155/214 (72%)

Query:   815 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 874
             DEIHLLHD+RGPVLE+++ART    +  QE  R++GLSATLPNY+DV   LR+ P+ GLF
Sbjct:   634 DEIHLLHDDRGPVLESIVARTFWASKYGQEYPRIIGLSATLPNYEDVGRFLRV-PKEGLF 692

Query:   875 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGR-NQLLVFVHSRKETGK 933
             YFD+SFRP  L QQ+ G+ E+ +LK+ + MND  YEKV+E     NQ++VFVHSRKET +
Sbjct:   693 YFDSSFRPCPLSQQFCGIKERNSLKKLKAMNDACYEKVLESINEGNQIIVFVHSRKETSR 752

Query:   934 TARAIRDMCLEKDTLGQFLREGSASMEVLRTEADQVKNGELRDLLPYGFAIHHAGMTRVD 993
             TA  +++   E++   +  +  + S ++L+TEA  V +  LR L+  G   HHAG+TR D
Sbjct:   753 TATWLKNKFAEENITHKLTKNDAGSKQILKTEAANVLDPSLRKLIESGIGTHHAGLTRSD 812

Query:   994 RTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
             R+L EDLFAD  +QVLV TATLAWGVNLPAHTV+
Sbjct:   813 RSLSEDLFADGLLQVLVCTATLAWGVNLPAHTVI 846

 Score = 379 (138.5 bits), Expect = 2.2e-221, Sum P(5) = 2.2e-221
 Identities = 77/217 (35%), Positives = 122/217 (56%)

Query:  1460 VEDVDSEAIRLIQACVDVLSSNGWLSPAVAAMEVAQMITQAMWSKDSYLKQLPHFNADII 1519
             ++D+  + + LI   VD+LS+NG+L+ A  AM++AQM+ Q +W  D+ L+Q+PHFN  I+
Sbjct:  1947 LKDILEKVVPLINVVVDILSANGYLN-ATTAMDLAQMLIQGVWDVDNPLRQIPHFNNKIL 2005

Query:  1520 KRCTEKGVETVFDIMXXXXXXXXXXXXXXXXXXADVARFCNRYPNIELSYEVLNKDRIXX 1579
             ++C E  VETV+DIM                  A VA F N YPN+EL+Y + N D +  
Sbjct:  2006 EKCKEINVETVYDIMALEDEERDEILTLTDSQLAQVAAFVNNYPNVELTYSLNNSDSLIS 2065

Query:  1580 XXXXXXXXXLDREDEVTG-PVIAPFYPQKREEGWWVVIGDPKTNSLLSIKRLTLQQKAK- 1637
                      L R+ E     V +  YP  + E WW+V+G+     L +IK++TL ++ + 
Sbjct:  2066 GVKQKITIQLTRDVEPENLQVTSEKYPFDKLESWWLVLGEVSKKELYAIKKVTLNKETQQ 2125

Query:  1638 IKLDFVAPNPGHHSYALYFMSDAYLGCDQEYKFSIDV 1674
              +L+F  P  G H+  ++ + D+YL  D+E  F I+V
Sbjct:  2126 YELEFDTPTSGKHNLTIWCVCDSYLDADKELSFEINV 2162

 Score = 362 (132.5 bits), Expect = 2.2e-221, Sum P(5) = 2.2e-221
 Identities = 101/298 (33%), Positives = 158/298 (53%)

Query:   266 IDAYWLQRRL-SKI-YDDAMVSQAKAGEVLNILKSAGDDRDA-ENQLVLLLGYDCFDFIK 322
             ID ++LQR+L S++ Y D  V Q  + ++LN +++   +  A E +LV LL ++     +
Sbjct:   288 IDEFFLQRKLRSELGYKDTSVIQDLSEKILNDIETLEHNPVALEQKLVDLLKFENISLAE 347

Query:   323 MLKKYRQMILYCTLLASSQSESERQKLRDTMSEDPALAKILRQLDTGKNEDGDAN-DSAD 381
              + K R  I +   LA S +E+E   L + M     L  ++ Q    +        DS D
Sbjct:   348 FILKNRSTIFWGIRLAKS-TENEIPNLIEKMVAK-GLNDLVEQYKFRETTHSKRELDSGD 405

Query:   382 ARQSTSIRHQMXXXXXXXXXXXXXTRQVLDLEDLQFSSGSHFMSNKRCELPDGSFRKQRK 441
              +  +S                     V+DLE ++F   S  M+  +  LP+GSF++ + 
Sbjct:   406 DQPQSS-------EAKRTKFSNPAIPPVIDLEKIKFDESSKLMTVTKVSLPEGSFKRVKP 458

Query:   442 GYEEVHVPALKPKPMGPDETLVPIDKLPRYVQHAFEDFKT--LNRIQSRLCKSALESDEN 499
              Y+E+H+PA   KP+  D  L  I  LP + Q AF   +T  LN IQS++  +A E D N
Sbjct:   459 QYDEIHIPA-PSKPV-IDYELKEITSLPDWCQEAFPSSETTSLNPIQSKVFHAAFEGDSN 516

Query:   500 LLLCAPTGAGKTNVALLCMLQEIGKHINADGT-INADEFKIIYVAPMRSLVQEMVGNF 556
             +L+CAPTG+GKTN+ALL +L+ +  H N     +N   FKI+Y+AP+++LVQE V  F
Sbjct:   517 MLICAPTGSGKTNIALLTVLKALSHHYNPKTKKLNLSAFKIVYIAPLKALVQEQVREF 574

 Score = 321 (118.1 bits), Expect = 2.2e-221, Sum P(5) = 2.2e-221
 Identities = 62/110 (56%), Positives = 82/110 (74%)

Query:   559 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 618
             DEIHLLHD+RGPVLE+++ART    +  QE  R++GLSATLPNY+DV   LR+ P+ GLF
Sbjct:   634 DEIHLLHDDRGPVLESIVARTFWASKYGQEYPRIIGLSATLPNYEDVGRFLRV-PKEGLF 692

Query:   619 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGR-NQLLV 667
             YFD+SFRP  L QQ+ G+ E+ +LK+ + MND  YEKV+E     NQ++V
Sbjct:   693 YFDSSFRPCPLSQQFCGIKERNSLKKLKAMNDACYEKVLESINEGNQIIV 742

 Score = 292 (107.8 bits), Expect = 1.3e-118, Sum P(4) = 1.3e-118
 Identities = 105/414 (25%), Positives = 189/414 (45%)

Query:  1028 DRTLVEDLFADRHIQVL-VSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQ 1086
             D  +V+ L+    + VL +S    A+        VII GT +Y+  + +++     ++L+
Sbjct:  1648 DERIVKRLYEYGAVSVLLISKDCSAFACK--TDEVIILGTNLYDGAEHKYMPYTINELLE 1705

Query:  1087 MLGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMISKLPDMLNAEIVLGTVQ 1146
             M+G A        G+ +++T+H+   YY   L   LP ES +   + D LN EI    +Q
Sbjct:  1706 MVGLASGND-SMAGKVLILTSHNMKAYYKKFLIEPLPTESYLQYIIHDTLNNEIANSIIQ 1764

Query:  1147 NLKDAVTWLGYTYLYIRMLRAPNLYGIS----HD-ALKEDPLLECHRADLIHTAALHLER 1201
             + +D V W  Y+Y Y R+   P+ YG+     H  ++    L+E    DL+ ++ + ++ 
Sbjct:  1765 SKQDCVDWFTYSYFYRRIHVNPSYYGVRDTSPHGISVFLSNLVETCLNDLVESSFIEIDD 1824

Query:  1202 SGL-IKYDRKSGHMQVTEL------GRIASHYYCTHETMATYNQLLKPTLSEIELFRVFS 1254
             +   +  +   G  + TE+      G IASHY  +  T+ ++   L  T +   +  V S
Sbjct:  1825 TEAEVTAEVNGGDDEATEIISTLSNGLIASHYGVSFFTIQSFVSSLSNTSTLKNMLYVLS 1884

Query:  1255 LSGEFRHITVRXXXXXXXXXXXXRAPIPIKESTDEPSA--KVNILLQAYISQLKLEGFAL 1312
              + EF  + +R            R P+   E T   S   KV +LLQAY S+L+L     
Sbjct:  1885 TAVEFESVPLRKGDRALLVKLSKRLPLRFPEHTSSGSVSFKVFLLLQAYFSRLELP-VDF 1943

Query:  1313 MSDMVFVTQSAARLMRAIFEIVLYRGWAQLADKALSLCKMVDRRMWQSMSPLRQFRXXXX 1372
              +D+  + +    L+  + +I+   G+   A  A+ L +M+ + +W   +PLRQ      
Sbjct:  1944 QNDLKDILEKVVPLINVVVDILSANGYLN-ATTAMDLAQMLIQGVWDVDNPLRQIPHFNN 2002

Query:  1373 XXXXXXXXXNFPWERLYD---LGPNEIGELIRVP--KLGKTIHKYVHQFPKLEL 1421
                      N   E +YD   L   E  E++ +   +L + +  +V+ +P +EL
Sbjct:  2003 KILEKCKEINV--ETVYDIMALEDEERDEILTLTDSQLAQ-VAAFVNNYPNVEL 2053

 Score = 139 (54.0 bits), Expect = 5.7e-113, Sum P(6) = 5.7e-113
 Identities = 29/102 (28%), Positives = 54/102 (52%)

Query:   668 STLRVELTISPDFQWDEKLHGGSEGFWILVEDVDSEVVLHHEYFLLKSRYATDDHVVKFF 727
             S +R  + I  D+ WD  +HG  E F +++ED D + +L+++   +       +  + F 
Sbjct:  1214 SVMRFNIEIIADWIWDMNVHGSLEPFLLMLEDTDGDSILYYDVLFITPDIVGHEFTLSFT 1273

Query:   728 VPVFEP----LPPQYFLRIVSDRWIGAETILPVSF---RLPR 762
               + +     LPP +FL ++S+ W  +E  +PVSF   +LP+
Sbjct:  1274 YELKQHNQNNLPPNFFLTLISENWWHSEFEIPVSFNGFKLPK 1315

 Score = 132 (51.5 bits), Expect = 2.2e-221, Sum P(5) = 2.2e-221
 Identities = 50/181 (27%), Positives = 78/181 (43%)

Query:    11 YEYKANSNLVLQADVRLI---ERRSRDEATGEVCSLVGKLEGTRMGDRFMRTKPIKAEER 67
             Y Y   SN VL+ D R +   +   RD    +  S+ G++    MG           +E 
Sbjct:    17 YRYDEMSNKVLKVDKRFMNTSQNPQRDAEISQPKSMSGRISAKDMGQGLCNNINKGLKEN 76

Query:    68 KVKRQKRDEAQYDFTRMKGATLLSEGVDEMVGIIYRPKTQETRQTYEVLLSFIQEALG-D 126
              V  +K  ++       +  T+L+   D    + Y PK     +TYE +L ++ E LG D
Sbjct:    77 DVAVEKTGKSASLKKIQQHNTILNSSSD--FRLHYYPKDPSNVETYEQILQWVTEVLGND 134

Query:   127 QPRDILCGAADEVLTVLK-NDRMXXXXXXXXTENL---LG-SLAEERFALLVNLGKKITD 181
              P D++ G AD  +  LK N+           E +   LG ++   +F  LV L K ITD
Sbjct:   135 IPHDLIIGTADIFIRQLKENEENEDGNIEERKEKIQHELGINIDSLKFNELVKLMKNITD 194

Query:   182 F 182
             +
Sbjct:   195 Y 195

 Score = 130 (50.8 bits), Expect = 4.7e-167, Sum P(4) = 4.7e-167
 Identities = 25/53 (47%), Positives = 36/53 (67%)

Query:   761 PRGAGKTNVALLCMLQEIGKHINADGT-INADEFKIIYVAPMRSLVQEMVGNF 812
             P G+GKTN+ALL +L+ +  H N     +N   FKI+Y+AP+++LVQE V  F
Sbjct:   522 PTGSGKTNIALLTVLKALSHHYNPKTKKLNLSAFKIVYIAPLKALVQEQVREF 574

 Score = 106 (42.4 bits), Expect = 5.7e-113, Sum P(6) = 5.7e-113
 Identities = 52/200 (26%), Positives = 86/200 (43%)

Query:   815 DEIH-LLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGL 873
             D+ H +     G V E LI+R I      ++ +R V LS  L N +D      +  ++ +
Sbjct:  1474 DDAHEISQGVYGAVYETLISRMIFIATQLEKKIRFVCLSNCLANARDFGEWAGMT-KSNI 1532

Query:   874 FYFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAG-RNQLLVFVHSRKETG 932
             + F  S R   LE       + + +     M  + +E     AG RN   VF+ SRK+  
Sbjct:  1533 YNFSPSERIEPLEINIQSFKDVEHISFNFSMLQMAFEASAAAAGNRNSSSVFLPSRKDCM 1592

Query:   933 KTARAIRDM--CLEKDTLGQFLREGSASMEVLRTEADQVKNGELRDLLPYGFAIHHAGMT 990
             + A A       +E D L   + E     E +    +++ +G LR  L +G  I + GM 
Sbjct:  1593 EVASAFMKFSKAIEWDMLN--VEE-----EQIVPYIEKLTDGHLRAPLKHGVGILYKGMA 1645

Query:   991 RVDRTLVEDLFADRHIQVLV 1010
               D  +V+ L+    + VL+
Sbjct:  1646 SNDERIVKRLYEYGAVSVLL 1665

 Score = 80 (33.2 bits), Expect = 4.1e-46, Sum P(4) = 4.1e-46
 Identities = 21/59 (35%), Positives = 36/59 (61%)

Query:   478 DFKTLNRIQSRLCKSALESDENLLLCAPTGAGKTNVALLCML----QEIGK--HINADG 530
             +FKT N+IQS++ +S   S++++ + +  G GKT +A L +L    Q  G+  +IN  G
Sbjct:  1344 EFKTFNKIQSQVFESLYNSNDSVFVGSGKGTGKTAMAELALLNHWRQNKGRAVYINPSG 1402

 Score = 72 (30.4 bits), Expect = 1.4e-95, Sum P(4) = 1.4e-95
 Identities = 20/71 (28%), Positives = 32/71 (45%)

Query:  1454 EGFWILVEDV---DSEAIRLIQACVDVLSSNGWLSPAVAAMEVAQMITQAMWSKDSYLKQ 1510
             EGF  L  D+      A RL++A  ++    GW  P    + + +  T  MW  +  L+Q
Sbjct:  1090 EGF-ALNSDIVFIHQNAGRLLRAMFEICLKRGWGHPTRMLLNLCKSATTKMWPTNCPLRQ 1148

Query:  1511 LPHFNADIIKR 1521
                   ++IKR
Sbjct:  1149 FKTCPVEVIKR 1159

 Score = 54 (24.1 bits), Expect = 1.5e-107, Sum P(6) = 1.5e-107
 Identities = 17/55 (30%), Positives = 26/55 (47%)

Query:   883 VALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQLLVFVHSRKETGKTARA 937
             +++    +G  +   +  F+  N I   +V E    +   VFV S K TGKTA A
Sbjct:  1327 ISISTSELGNDDFSEVFEFKTFNKI-QSQVFESLYNSNDSVFVGSGKGTGKTAMA 1380

 Score = 47 (21.6 bits), Expect = 2.4e-96, Sum P(6) = 2.4e-96
 Identities = 9/27 (33%), Positives = 18/27 (66%)

Query:   919 NQLLVFVHSRKETGKTARAIRDMCLEK 945
             N  +VF+H  +  G+  RA+ ++CL++
Sbjct:  1095 NSDIVFIH--QNAGRLLRAMFEICLKR 1119

 Score = 45 (20.9 bits), Expect = 4.4e-69, Sum P(4) = 4.4e-69
 Identities = 20/71 (28%), Positives = 35/71 (49%)

Query:  1393 PN--EIGELIRVPKLGKTIHKYVHQFPKLELATHIQPIT-RSTLRVELTISPDFQWDEKL 1449
             PN  ++G  +RVPK G  +  +   F    L+     I  R++L+ +L    D  +++ L
Sbjct:   675 PNYEDVGRFLRVPKEG--LFYFDSSFRPCPLSQQFCGIKERNSLK-KLKAMNDACYEKVL 731

Query:  1450 HGGSEGFWILV 1460
                +EG  I+V
Sbjct:   732 ESINEGNQIIV 742

 Score = 39 (18.8 bits), Expect = 1.4e-35, Sum P(4) = 1.4e-35
 Identities = 9/31 (29%), Positives = 17/31 (54%)

Query:  1008 VLVSTATLAWGVNLPAHTVVD-RTLVEDLFA 1037
             +L + +T+ WG+ L   T  +   L+E + A
Sbjct:   349 ILKNRSTIFWGIRLAKSTENEIPNLIEKMVA 379

 Score = 38 (18.4 bits), Expect = 1.8e-126, Sum P(5) = 1.8e-126
 Identities = 10/34 (29%), Positives = 15/34 (44%)

Query:  1314 SDMVFVTQSAARLMRAIFEIVLYRGWAQLADKAL 1347
             +D VFV         A+ E+ L   W Q   +A+
Sbjct:  1363 NDSVFVGSGKGTGKTAMAELALLNHWRQNKGRAV 1396

 Score = 37 (18.1 bits), Expect = 2.2e-35, Sum P(4) = 2.2e-35
 Identities = 6/18 (33%), Positives = 11/18 (61%)

Query:  1043 VLVSTATLAWGVNLPAHT 1060
             +L + +T+ WG+ L   T
Sbjct:   349 ILKNRSTIFWGIRLAKST 366


>UNIPROTKB|F1NTD6 [details] [associations]
            symbol:ascc3 "Activating signal cointegrator 1 complex
            subunit 3" species:9031 "Gallus gallus" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0006307 "DNA dealkylation involved in
            DNA repair" evidence=ISS] [GO:0008283 "cell proliferation"
            evidence=ISS] [GO:0032508 "DNA duplex unwinding" evidence=ISS]
            [GO:0043140 "ATP-dependent 3'-5' DNA helicase activity"
            evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00382 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005794 GO:GO:0006355 GO:GO:0006307 GO:GO:0008283
            GO:GO:0006351 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 CTD:10973 KO:K01529 GO:GO:0043140
            InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
            EMBL:AADN02002229 EMBL:AADN02002230 EMBL:AADN02002231
            EMBL:AADN02002232 EMBL:AADN02002233 EMBL:AADN02002234
            IPI:IPI00590520 RefSeq:XP_419816.1 UniGene:Gga.31679
            ProteinModelPortal:F1NTD6 PRIDE:F1NTD6 GeneID:421790
            KEGG:gga:421790 Uniprot:F1NTD6
        Length = 2211

 Score = 1018 (363.4 bits), Expect = 2.3e-199, Sum P(6) = 2.3e-199
 Identities = 198/443 (44%), Positives = 288/443 (65%)

Query:  1028 DRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQM 1087
             DR+LVE+LF++ HI+VLV TATLAWGVNLPAH V+IKGTQIY  ++G +V+LG LDV+Q+
Sbjct:   799 DRSLVENLFSNGHIKVLVCTATLAWGVNLPAHAVVIKGTQIYAAKRGSFVDLGILDVMQI 858

Query:  1088 LGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMISKLPDMLNAEIVLGTVQN 1147
              GRAGRPQ+D  GEG++IT H +L +YL+LL  Q P+ESQ +  L D LNAEI LGTV N
Sbjct:   859 FGRAGRPQFDKFGEGIIITTHDKLSHYLTLLTQQNPIESQFLESLADNLNAEIALGTVTN 918

Query:  1148 LKDAVTWLGYTYLYIRMLRAPNLYGISHDALKEDPLLECHRADLIHTAALHLERSGLIKY 1207
             +++AV W+ YTYLY+RM   P +YGISH A + DP LE HR  L+      L+++ +I++
Sbjct:   919 VEEAVKWISYTYLYVRMRANPLVYGISHKAYQMDPGLEKHREQLVIEVGRKLDKARMIRF 978

Query:  1208 DRKSGHMQVTELGRIASHYYCTHETMATYNQLLKPTLSEIELFRVFSLSGEFRHITVRXX 1267
             + ++G    T+LGR ASHYY  + T+ T+N+L     +E ++  + S + EF  I VR  
Sbjct:   979 EERTGFFSSTDLGRTASHYYIKYNTIETFNELFDAHKTEGDILAIVSKAEEFEQIKVREE 1038

Query:  1268 XXXXXXXXXXR-APIPIKESTDEPSAKVNILLQAYISQLKLEGFALMSDMVFVTQSAARL 1326
                           +P     +    K+NILLQ YIS+ +L+ F+L+SD  +V Q+AAR+
Sbjct:  1039 EIEELDTLLNDFCELPAPGGVENNYGKINILLQTYISRGELDSFSLISDSAYVAQNAARI 1098

Query:  1327 MRAIFEIVLYRGWAQLADKALSLCKMVDRRMWQSMSPLRQFRXXXXXXXXXXXXXNFPWE 1386
             +RA+FEI L + W  +  + L+L K++D+R+W  +SPLRQF              N   +
Sbjct:  1099 VRALFEIALRKRWPAMTYRLLNLSKVIDKRLWGWVSPLRQFSVLPPSVLSKLEEKNLTVD 1158

Query:  1387 RLYDLGPNEIGELIRVPKLGKTIHKYVHQFPKLELATHIQPITRSTLRVELTISPDFQWD 1446
             ++ D+  +EIG ++   K+G  + + VHQ P + +   IQPITR+ LRV L I+PDF W+
Sbjct:  1159 KMKDMRKDEIGHMLHHVKIGLKVKQCVHQIPSIAMEATIQPITRTVLRVRLNITPDFTWN 1218

Query:  1447 EKLHGG-SEGFWILVEDVDSEAI 1468
             +++HG   E +WI VED  ++ I
Sbjct:  1219 DQVHGTVGEPWWIWVEDPTNDHI 1241

 Score = 567 (204.7 bits), Expect = 2.3e-199, Sum P(6) = 2.3e-199
 Identities = 109/215 (50%), Positives = 153/215 (71%)

Query:   815 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 874
             DE+HLLH++RGPVLE+++ART+R +E+TQ  +R++GLSATLPNY DVAT L + P  GLF
Sbjct:   620 DEVHLLHEDRGPVLESIVARTLRQVESTQSMIRILGLSATLPNYLDVATFLHVNPYIGLF 679

Query:   875 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEH--AGRNQLLVFVHSRKETG 932
             YFD+ FRPV L Q +IG+     +++   M+++ YE V++   AG +Q++VFVH+R  T 
Sbjct:   680 YFDSRFRPVPLGQTFIGIKTTNKVQQLNHMDEVCYENVLKQIMAG-HQVMVFVHARNATV 738

Query:   933 KTARAIRDMCLEKDTLGQFLREGSASMEVLRTEADQVKNGELRDLLPYGFAIHHAGMTRV 992
             +TA A+R+       +  FL    +       +  + +N +LR+L P GF+IHHAGM R 
Sbjct:   739 RTAMALREKAKNNGHICHFLSPQGSDYGQAEKQVQRSRNKQLRELFPDGFSIHHAGMLRQ 798

Query:   993 DRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
             DR+LVE+LF++ HI+VLV TATLAWGVNLPAH VV
Sbjct:   799 DRSLVENLFSNGHIKVLVCTATLAWGVNLPAHAVV 833

 Score = 525 (189.9 bits), Expect = 8.5e-171, Sum P(9) = 8.5e-171
 Identities = 121/352 (34%), Positives = 190/352 (53%)

Query:  1014 TLAWGVNLPAHTVV---DRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYN 1070
             TLA+G+ +  H  +   DR  VE+LF +  IQVL++T+TLAWGVN PAH VI+KGT+ Y+
Sbjct:  1620 TLAFGIGMH-HAGLHERDRKTVEELFVNCKIQVLIATSTLAWGVNFPAHLVIVKGTEYYD 1678

Query:  1071 PEKGRWVELGALDVLQMLGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMIS 1130
              +  R+V+    DVLQM+GRAGRPQ+D +G+ V++ +  +  +Y   L    PVES ++ 
Sbjct:  1679 GKTRRYVDYPITDVLQMMGRAGRPQFDDQGKAVILVHDIKKDFYKKFLYEPFPVESSLLD 1738

Query:  1131 KLPDMLNAEIVLGTVQNLKDAVTWLGYTYLYIRMLRAP---NLYGISHDALKEDPLLECH 1187
              L D LNAEI  GT+ + +DA+ ++ +TY + R++  P   NL  +SHD + +      +
Sbjct:  1739 VLADHLNAEIAAGTITSKQDAMDYITWTYFFRRLIMNPTYYNLDNVSHDTMNK------Y 1792

Query:  1188 RADLIHTAALHLERSGLIKYDRKSGHMQVTELGRIASHYYCTHETMATYNQLLKPTLSEI 1247
              + L+  +   LE S  I+    +  ++    GRIAS+YY  H T+  +   LKP  S  
Sbjct:  1793 LSSLVEKSLFDLECSYCIEIGEDNRTIEPLTYGRIASYYYLKHPTIGMFKDQLKPESSVE 1852

Query:  1248 ELFRVFSLSGEFRHITVRXXXXXXXXXXXXRAPIPIK-ESTDEPSAKVNILLQAYISQLK 1306
             EL  + + + E+  + VR              PI +   S D    K ++LLQA+ S   
Sbjct:  1853 ELLLILTNADEYTDLPVRHNEDQMNSELAKHLPIEVNPHSFDSSHTKTHLLLQAHFSHAI 1912

Query:  1307 LEGFALMSDMVFVTQSAARLMRAIFEIVLYRGWAQLADKALSLCKMVDRRMW 1358
             L      +D   V   A R+ +A+ ++  + GW   A    +L +MV +  W
Sbjct:  1913 LPCPDYATDTKTVLDQAIRICQAMLDVTAHHGWLVAALNITNLVQMVVQGRW 1964

 Score = 373 (136.4 bits), Expect = 8.5e-171, Sum P(9) = 8.5e-171
 Identities = 91/227 (40%), Positives = 130/227 (57%)

Query:   802 RSLVQEMVGNFGKDEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDV 861
             RS VQ+ V     DEIHLL DERGPVLE +++RT      T++ VR+VGLS  L N +D+
Sbjct:  1450 RSYVQK-VSILIIDEIHLLGDERGPVLEVIVSRTNFISSHTEKPVRVVGLSTALANARDL 1508

Query:   862 ATLLRIKPETGLFYFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQL 921
             A  L I  + GLF F  S RPV LE    G   +    R   MN   ++ +  H+    +
Sbjct:  1509 ADWLNIN-QMGLFNFRPSVRPVPLEVHIQGFPGQHYCPRMARMNKPAFQAIRSHSPAKPV 1567

Query:   922 LVFVHSRKETGKTARAIRDMCLEKDTLGQFLREGSASM-EVLRTEADQVKNGELRDLLPY 980
             L+FV SR++T  T+  +      +D   Q+L+     M +++ T    V++  L+  L +
Sbjct:  1568 LIFVSSRRQTRLTSLDLIAFLATEDDPKQWLKMDEREMNDIIGT----VRDSNLKLTLAF 1623

Query:   981 GFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
             G  +HHAG+   DR  VE+LF +  IQVL++T+TLAWGVN PAH V+
Sbjct:  1624 GIGMHHAGLHERDRKTVEELFVNCKIQVLIATSTLAWGVNFPAHLVI 1670

 Score = 316 (116.3 bits), Expect = 2.3e-199, Sum P(6) = 2.3e-199
 Identities = 82/232 (35%), Positives = 124/232 (53%)

Query:   341 QSESERQKLRDTMSEDPALAKILRQLDTGKNEDGDANDSA----DARQSTSIRHQMXXXX 396
             QSE E+  ++    E+   A+  R+   G  EDG+ +       D ++   ++ ++    
Sbjct:   337 QSEQEKLLMKQYRREEKRNAR--REKQAG--EDGEVSGEGLLCFDPKE-LRLQRELALLN 391

Query:   397 XXXXXXXXXTRQVLDLEDLQFS----------SGSHFMSNKRCELPDGSFRKQRKGYEEV 446
                       R+V DLE + +             S F+   +  LP+   R+  K YEEV
Sbjct:   392 ARSVPILGRQREV-DLERIHYPHVYDSRAEAMKTSAFIGGAKVFLPESVQRENNKMYEEV 450

Query:   447 HVPALKPKPMGPDETLVPIDKLPRYVQHAFEDFKTLNRIQSRLCKSALESDENLLLCAPT 506
              +P  +P P+G +E +V I  L    Q AF+  K LNRIQS + ++A  ++EN+L+CAPT
Sbjct:   451 KIPHSEPMPIGIEEKIVYIKDLDEIGQLAFKGMKRLNRIQSIVFETAYNTNENMLICAPT 510

Query:   507 GAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNFGK 558
             GAGKTN+A+L +L EI +H+   G I  DEFKI+YVAPM++L  EM   F K
Sbjct:   511 GAGKTNIAMLTVLHEIRQHVQ-HGVIKKDEFKIVYVAPMKALAAEMTNYFSK 561

 Score = 308 (113.5 bits), Expect = 8.5e-171, Sum P(9) = 8.5e-171
 Identities = 57/111 (51%), Positives = 84/111 (75%)

Query:   559 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 618
             DE+HLLH++RGPVLE+++ART+R +E+TQ  +R++GLSATLPNY DVAT L + P  GLF
Sbjct:   620 DEVHLLHEDRGPVLESIVARTLRQVESTQSMIRILGLSATLPNYLDVATFLHVNPYIGLF 679

Query:   619 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEH--AGRNQLLV 667
             YFD+ FRPV L Q +IG+     +++   M+++ YE V++   AG +Q++V
Sbjct:   680 YFDSRFRPVPLGQTFIGIKTTNKVQQLNHMDEVCYENVLKQIMAG-HQVMV 729

 Score = 235 (87.8 bits), Expect = 8.5e-171, Sum P(9) = 8.5e-171
 Identities = 42/95 (44%), Positives = 67/95 (70%)

Query:   668 STLRVELTISPDFQWDEKLHGG-SEGFWILVEDVDSEVVLHHEYFLL-KSRYATDD-HVV 724
             + LRV L I+PDF W++++HG   E +WI VED  ++ + H EYF++ K +  T +  ++
Sbjct:  1203 TVLRVRLNITPDFTWNDQVHGTVGEPWWIWVEDPTNDHIYHSEYFIIQKKQVITKEPQLL 1262

Query:   725 KFFVPVFEPLPPQYFLRIVSDRWIGAETILPVSFR 759
              F +P+FEPLP QY++R VSDRW+GAE +  ++F+
Sbjct:  1263 VFTIPIFEPLPSQYYIRAVSDRWLGAEAVCIINFQ 1297

 Score = 191 (72.3 bits), Expect = 2.5e-103, Sum P(6) = 2.5e-103
 Identities = 50/122 (40%), Positives = 67/122 (54%)

Query:   546 RSLVQEMVGNFGKDEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDV 605
             RS VQ+ V     DEIHLL DERGPVLE +++RT      T++ VR+VGLS  L N +D+
Sbjct:  1450 RSYVQK-VSILIIDEIHLLGDERGPVLEVIVSRTNFISSHTEKPVRVVGLSTALANARDL 1508

Query:   606 ATLLRIKPETGLFYFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQL 665
             A  L I  + GLF F  S RPV LE    G   +    R   MN   ++ +  H+    +
Sbjct:  1509 ADWLNIN-QMGLFNFRPSVRPVPLEVHIQGFPGQHYCPRMARMNKPAFQAIRSHSPAKPV 1567

Query:   666 LV 667
             L+
Sbjct:  1568 LI 1569

 Score = 154 (59.3 bits), Expect = 2.2e-182, Sum P(6) = 2.2e-182
 Identities = 30/54 (55%), Positives = 38/54 (70%)

Query:   761 PRGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNFGK 814
             P GAGKTN+A+L +L EI +H+   G I  DEFKI+YVAPM++L  EM   F K
Sbjct:   509 PTGAGKTNIAMLTVLHEIRQHVQ-HGVIKKDEFKIVYVAPMKALAAEMTNYFSK 561

 Score = 153 (58.9 bits), Expect = 2.3e-199, Sum P(6) = 2.3e-199
 Identities = 27/90 (30%), Positives = 55/90 (61%)

Query:  1600 IAPFYPQKREEGWWVVIGDPKTNSLLSIKRLT-LQQKAKIKLDFVAPN-PGHHSYALYFM 1657
             +AP +P+ ++EGW++++G+     L+++KR   ++ +  + + F  P  PG   Y LY M
Sbjct:  2112 VAPRFPKVKDEGWFLILGEVDKKELIALKRTGYVRNRNTVSVAFYTPETPGKCIYTLYLM 2171

Query:  1658 SDAYLGCDQEYKFSIDVSEYYSGGESDSDV 1687
             SD+YLG DQ+Y   +++    +  ++ ++V
Sbjct:  2172 SDSYLGMDQQYDIYLNIIPTSTSAQATTEV 2201

 Score = 105 (42.0 bits), Expect = 2.5e-100, Sum P(6) = 2.5e-100
 Identities = 31/94 (32%), Positives = 52/94 (55%)

Query:   463 VPIDKL--PRY-VQHAFEDFKTLNRIQSRLCKSALESDENLLLCAPTGAGKTNVALLCML 519
             +P+  L  P Y V + F  F   N IQ+++  +   +D N+LL APTG+GKT  A L + 
Sbjct:  1317 LPVTALGHPEYEVLYKFTHF---NPIQTQIFHTLYHTDCNVLLGAPTGSGKTVAAELAIF 1373

Query:   520 QEIGKHINADGTINADEFKIIYVAPMRSLVQEMV 553
             +   K+  +         K +Y+AP+++LV+E +
Sbjct:  1374 RVFNKYPTS---------KAVYIAPLKALVRERI 1398

 Score = 98 (39.6 bits), Expect = 2.3e-199, Sum P(6) = 2.3e-199
 Identities = 19/48 (39%), Positives = 29/48 (60%)

Query:  1466 EAIRLIQACVDVLSSNGWLSPAVAAMEVAQMITQAMWSKDSYLKQLPH 1513
             +AIR+ QA +DV + +GWL  A+    + QM+ Q  W  DS L  +P+
Sbjct:  1928 QAIRICQAMLDVTAHHGWLVAALNITNLVQMVVQGRWIHDSSLLTVPN 1975

 Score = 85 (35.0 bits), Expect = 7.7e-81, Sum P(4) = 7.7e-81
 Identities = 41/210 (19%), Positives = 77/210 (36%)

Query:  1463 VDSEAIRLIQACVDVLSSNGWLSPAVAAMEVAQMITQAMWSKDSYLKQLPHFNADIIKRC 1522
             V   A R+++A  ++     W +     + ++++I + +W   S L+Q       ++ + 
Sbjct:  1091 VAQNAARIVRALFEIALRKRWPAMTYRLLNLSKVIDKRLWGWVSPLRQFSVLPPSVLSKL 1150

Query:  1523 TEKGVETVFDIMXXXXXXXXXXXXXXXXXXADVARFCNRYPNIELSYEVLNKDRIXXXXX 1582
              EK + TV D M                    V +  ++ P+I +   +    R      
Sbjct:  1151 EEKNL-TV-DKMKDMRKDEIGHMLHHVKIGLKVKQCVHQIPSIAMEATIQPITRTVLRVR 1208

Query:  1583 XXXXXXLDREDEVTGPVIAPFYPQKREEGWWVVIGDPKTNSLLSIKRLTLQQKAKIK--- 1639
                       D+V G V  P         WW+ + DP  + +   +   +Q+K  I    
Sbjct:  1209 LNITPDFTWNDQVHGTVGEP---------WWIWVEDPTNDHIYHSEYFIIQKKQVITKEP 1259

Query:  1640 --LDFVAP--NPGHHSYALYFMSDAYLGCD 1665
               L F  P   P    Y +  +SD +LG +
Sbjct:  1260 QLLVFTIPIFEPLPSQYYIRAVSDRWLGAE 1289

 Score = 60 (26.2 bits), Expect = 8.5e-171, Sum P(9) = 8.5e-171
 Identities = 15/49 (30%), Positives = 27/49 (55%)

Query:   761 PRGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMV 809
             P G+GKT  A L + +   K+  +         K +Y+AP+++LV+E +
Sbjct:  1359 PTGSGKTVAAELAIFRVFNKYPTS---------KAVYIAPLKALVRERI 1398

 Score = 56 (24.8 bits), Expect = 2.3e-199, Sum P(6) = 2.3e-199
 Identities = 20/61 (32%), Positives = 38/61 (62%)

Query:   291 EVLNILKSAGDDRDAENQLVLLLGYDCFDFIKMLKKYRQMILYCTLLASSQSESERQKLR 350
             E+L   KS GD+   +N+L  LLG + F+ I+ L + R +I+  +L  + Q++++ Q L+
Sbjct:   261 EMLASPKS-GDE--LQNELFELLGPEGFELIEKLLQNRSVIVERSL--TCQNDNKFQTLQ 315

Query:   351 D 351
             +
Sbjct:   316 E 316

 Score = 39 (18.8 bits), Expect = 3.5e-92, Sum P(6) = 3.5e-92
 Identities = 7/28 (25%), Positives = 15/28 (53%)

Query:  1419 LELATHIQPITRSTLRVELTISPDFQWD 1446
             +EL   + P  R+  + +L ++   +WD
Sbjct:  1414 VELTGDVTPDMRAIAQADLIVTTPEKWD 1441

 Score = 37 (18.1 bits), Expect = 1.0e-08, Sum P(3) = 1.0e-08
 Identities = 9/36 (25%), Positives = 19/36 (52%)

Query:   269 YWLQRRLSKIYDDAMVSQAKAGEVLNILKSAGDDRD 304
             Y+L+     ++ D +  ++   E+L IL +A +  D
Sbjct:  1831 YYLKHPTIGMFKDQLKPESSVEELLLILTNADEYTD 1866


>UNIPROTKB|H9L1I6 [details] [associations]
            symbol:SNRNP200 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] InterPro:IPR011545 Pfam:PF00270
            GO:GO:0005524 GO:GO:0003676 GeneTree:ENSGT00640000091272
            GO:GO:0008026 EMBL:AADN02044729 EMBL:AADN02044730
            Ensembl:ENSGALT00000035544 Uniprot:H9L1I6
        Length = 571

 Score = 1691 (600.3 bits), Expect = 2.8e-198, Sum P(2) = 2.8e-198
 Identities = 341/561 (60%), Positives = 411/561 (73%)

Query:     1 MADAAARQLQYEYKANSNLVLQADVRLIERRSRDEATGEVCSLVGKLEGTRMGDRFMRTK 60
             MAD  AR LQYEYKANSNLVLQAD  LI+R  RDE TGEV SLVGKLEGTRMGD+  RTK
Sbjct:     1 MADVTARSLQYEYKANSNLVLQADRSLIDRTRRDEPTGEVLSLVGKLEGTRMGDKAQRTK 60

Query:    61 PIKAEERKVKRQKRDEAQYDFTRMKGATLLSEGVDEMVGIIYRPKTQETRQTYEVLLSFI 120
             P   EER+ KR+KRDE ++D   MKG TLLSEG+DEMVGIIY+PKT+ TR+TYEVLLSFI
Sbjct:    61 PQMQEERRAKRRKRDEDRHDINTMKGYTLLSEGIDEMVGIIYKPKTKVTRETYEVLLSFI 120

Query:   121 QEALGDQPRDILCGAADEVLTVLKNDRMXXXXXXXXTENLLGSLAEERFALLVNLGKKIT 180
             Q ALGDQPRDILCGAADEVL VLKN+++         + LLG   + R+ +LVNLGKKIT
Sbjct:   121 QAALGDQPRDILCGAADEVLAVLKNEKLRDKERRKEIDLLLGQTDDTRYHVLVNLGKKIT 180

Query:   181 DFGAEQKSTTAEENIDDTYGINVQFXXXXXXXXXXTFXXXXXXXXXXXXXXXXXXNTAIH 240
             D+G +++    ++NID+TYG+NVQF           +                       
Sbjct:   181 DYGGDKEIQNMDDNIDETYGVNVQFESDEEEGDEDIYGEVRDEASDDDMEGDEAVVRCTL 240

Query:   241 AENL-AGGEDAEGTGRKKDKSLHPLDIDAYWLQRRLSKIYDDAMVSQAKAGEVLNILKSA 299
             + NL A GE    + +KKD  LHP DIDA+WLQR+LS+ YDDA+VSQ KA EVL ILK+A
Sbjct:   241 SANLVASGELM--SSKKKD--LHPRDIDAFWLQRQLSRFYDDAIVSQKKADEVLEILKTA 296

Query:   300 GDDRDAENQLVLLLGYDCFDFIKMLKKYRQMILYCTLLASSQSESERQKLRDTMSEDPAL 359
              DDR+ ENQLVLLLG++ FDFIK+L+++R MILYCTLLAS+QSE+E++++   M  DP L
Sbjct:   297 SDDRECENQLVLLLGFNTFDFIKVLRQHRMMILYCTLLASAQSEAEKERIMGKMEADPEL 356

Query:   360 AKILRQLDTGKNED--GDANDSADARQSTSIRHQMXXXXXXXXXXXXXTRQVLDLEDLQF 417
             +K L QL   + ED   +     +  + + +   +              RQVLDLEDL F
Sbjct:   357 SKFLYQLHETEKEDLIREERSRRERVRQSRMDTDLETMDLDQGGEALAPRQVLDLEDLVF 416

Query:   418 SSGSHFMSNKRCELPDGSFRKQRKGYEEVHVPALKPKPMGPDETLVPIDKLPRYVQHAFE 477
             + GSHFM+NKRC+LPDGSFR+QRKGYEEVHVPALKPKP G +E LV ++KLP+Y Q  FE
Sbjct:   417 AQGSHFMANKRCQLPDGSFRRQRKGYEEVHVPALKPKPFGSEEQLVSVEKLPKYAQAGFE 476

Query:   478 DFKTLNRIQSRLCKSALESDENLLLCAPTGAGKTNVALLCMLQEIGKHINADGTINADEF 537
              FKTLNRIQS+L ++ALESDENLLLCAPTGAGKTNVAL+CML+EIGKHIN DGTIN DEF
Sbjct:   477 GFKTLNRIQSKLYRAALESDENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDEF 536

Query:   538 KIIYVAPMRSLVQEMVGNFGK 558
             KIIY+APMRSLVQEMVG+FGK
Sbjct:   537 KIIYIAPMRSLVQEMVGSFGK 557

 Score = 251 (93.4 bits), Expect = 2.8e-198, Sum P(2) = 2.8e-198
 Identities = 47/54 (87%), Positives = 51/54 (94%)

Query:   761 PRGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNFGK 814
             P GAGKTNVAL+CML+EIGKHIN DGTIN DEFKIIY+APMRSLVQEMVG+FGK
Sbjct:   504 PTGAGKTNVALMCMLREIGKHINMDGTINVDEFKIIYIAPMRSLVQEMVGSFGK 557


>UNIPROTKB|E1BNG3 [details] [associations]
            symbol:ascc3 "Activating signal cointegrator 1 complex
            subunit 3" species:9913 "Bos taurus" [GO:0043140 "ATP-dependent
            3'-5' DNA helicase activity" evidence=ISS] [GO:0032508 "DNA duplex
            unwinding" evidence=ISS] [GO:0008283 "cell proliferation"
            evidence=ISS] [GO:0006307 "DNA dealkylation involved in DNA repair"
            evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0005794
            "Golgi apparatus" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00382 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005794 GO:GO:0006355 GO:GO:0006307 GO:GO:0008283
            GO:GO:0006351 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 EMBL:DAAA02026160 EMBL:DAAA02026161
            EMBL:DAAA02026162 EMBL:DAAA02026163 EMBL:DAAA02026164
            EMBL:DAAA02026165 EMBL:DAAA02026166 EMBL:DAAA02026167
            EMBL:DAAA02026168 EMBL:DAAA02026169 EMBL:DAAA02026170
            EMBL:DAAA02026171 EMBL:DAAA02026172 EMBL:DAAA02026173
            EMBL:DAAA02026174 EMBL:DAAA02026175 EMBL:DAAA02026176
            EMBL:DAAA02026177 EMBL:DAAA02026178 EMBL:DAAA02026179
            EMBL:DAAA02026180 EMBL:DAAA02026181 EMBL:DAAA02026182
            EMBL:DAAA02026183 EMBL:DAAA02026184 EMBL:DAAA02026185
            EMBL:DAAA02026186 EMBL:DAAA02026187 EMBL:DAAA02026188
            EMBL:DAAA02026189 EMBL:DAAA02026190 EMBL:DAAA02026191
            EMBL:DAAA02026192 EMBL:DAAA02026193 EMBL:DAAA02026194
            EMBL:DAAA02026195 EMBL:DAAA02026196 EMBL:DAAA02026197
            EMBL:DAAA02026198 EMBL:DAAA02026199 IPI:IPI00689177
            RefSeq:NP_001193047.1 UniGene:Bt.26262 PRIDE:E1BNG3
            Ensembl:ENSBTAT00000027294 GeneID:538416 KEGG:bta:538416 CTD:10973
            GeneTree:ENSGT00700000104562 KO:K01529 OMA:FPGKHYC NextBio:20877349
            GO:GO:0043140 InterPro:IPR004179 Pfam:PF02889 SMART:SM00611
            SMART:SM00973 Uniprot:E1BNG3
        Length = 2201

 Score = 1016 (362.7 bits), Expect = 1.4e-197, Sum P(6) = 1.4e-197
 Identities = 199/443 (44%), Positives = 285/443 (64%)

Query:  1028 DRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQM 1087
             DR LVE LF++ HI+VLV TATLAWGVNLPAH VIIKGTQIY  ++G +V+LG LDV+Q+
Sbjct:   790 DRNLVESLFSNGHIKVLVCTATLAWGVNLPAHAVIIKGTQIYAAKRGSFVDLGILDVMQI 849

Query:  1088 LGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMISKLPDMLNAEIVLGTVQN 1147
              GRAGRPQ+D  GEG++IT H +L +YLSLL  Q P+ESQ +  L D LNAEI LGTV N
Sbjct:   850 FGRAGRPQFDKFGEGIIITTHDKLSHYLSLLTQQNPIESQFLESLADNLNAEIALGTVTN 909

Query:  1148 LKDAVTWLGYTYLYIRMLRAPNLYGISHDALKEDPLLECHRADLIHTAALHLERSGLIKY 1207
             +++AV W+ YTYLY+RM   P +YGISH A + DP L  HR  L+      L+++ +I++
Sbjct:   910 VEEAVKWISYTYLYVRMRANPLVYGISHKAYQIDPTLAKHREQLVIEVGRKLDKARMIRF 969

Query:  1208 DRKSGHMQVTELGRIASHYYCTHETMATYNQLLKPTLSEIELFRVFSLSGEFRHITVRXX 1267
             + ++G+   T+LGR ASHYY  + T+ T+N+L     +E ++F + S + EF  I VR  
Sbjct:   970 EERTGYFSSTDLGRTASHYYIKYNTIETFNELFDAHKTESDIFAIVSKAEEFDQIKVREE 1029

Query:  1268 XXXXXXXXXXR-APIPIKESTDEPSAKVNILLQAYISQLKLEGFALMSDMVFVTQSAARL 1326
                           +      +    K+NILLQ YIS+ +++ F+L+SD  +V Q+AAR+
Sbjct:  1030 EIEELDTLLSNFCELSAPGGVENSYGKINILLQTYISRGEVDSFSLISDSAYVAQNAARI 1089

Query:  1327 MRAIFEIVLYRGWAQLADKALSLCKMVDRRMWQSMSPLRQFRXXXXXXXXXXXXXNFPWE 1386
             +RA+FEI L + W  +  + L+L K++D+R+W   SPLRQF              N   +
Sbjct:  1090 VRALFEIALRKRWPAMTYRLLNLSKVIDKRLWGWTSPLRQFSVLPPHILTRLEEKNLTVD 1149

Query:  1387 RLYDLGPNEIGELIRVPKLGKTIHKYVHQFPKLELATHIQPITRSTLRVELTISPDFQWD 1446
             +L D+  +EIG ++    +G  + + VHQ P + +   IQPITR+ LRV L+ISPDF W+
Sbjct:  1150 KLKDMRKDEIGHILHHVNIGLKVKQCVHQIPSVTMEASIQPITRTVLRVTLSISPDFSWN 1209

Query:  1447 EKLHGG-SEGFWILVEDVDSEAI 1468
             +++HG   E +WI VED  ++ I
Sbjct:  1210 DQVHGTVGEPWWIWVEDPTNDHI 1232

 Score = 538 (194.4 bits), Expect = 1.4e-197, Sum P(6) = 1.4e-197
 Identities = 103/215 (47%), Positives = 148/215 (68%)

Query:   815 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 874
             DE+HLLH++RGPVLE+++ART+R +E+TQ  +R++GLSATLPNY DVAT L + P  GLF
Sbjct:   611 DEVHLLHEDRGPVLESIVARTLRQVESTQSMIRILGLSATLPNYLDVATFLHVNPCIGLF 670

Query:   875 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEH--AGRNQLLVFVHSRKETG 932
             +FD  FRPV L Q ++G+     +++   M+++ YE V++   AG +Q++VFVH+R  T 
Sbjct:   671 FFDGRFRPVPLGQTFLGIKSANKVQQLNNMDEVCYESVLKQVKAG-HQVMVFVHARNATV 729

Query:   933 KTARAIRDMCLEKDTLGQFLREGSASMEVLRTEADQVKNGELRDLLPYGFAIHHAGMTRV 992
             +TA ++ +       +  FL            +  + +N ++R+L P GF+IHHAGM R 
Sbjct:   730 RTAMSLIERAKNNGQICYFLPTQGPEYGHAEKQVQKSRNRQVRELFPDGFSIHHAGMLRQ 789

Query:   993 DRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
             DR LVE LF++ HI+VLV TATLAWGVNLPAH V+
Sbjct:   790 DRNLVESLFSNGHIKVLVCTATLAWGVNLPAHAVI 824

 Score = 534 (193.0 bits), Expect = 1.1e-166, Sum P(8) = 1.1e-166
 Identities = 123/358 (34%), Positives = 197/358 (55%)

Query:  1014 TLAWGVNLPAHTVV---DRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYN 1070
             TLA+G+ +  H  +   DR  VE+LF +  IQVL++T+TLAWGVN PAH VIIKGT+ Y+
Sbjct:  1611 TLAFGIGMH-HAGLHERDRKTVEELFVNCKIQVLIATSTLAWGVNFPAHLVIIKGTEYYD 1669

Query:  1071 PEKGRWVELGALDVLQMLGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMIS 1130
              +  R+V+    DVLQM+GRAGRPQ+D +G+ V++ +  +  +Y   L    PVES ++ 
Sbjct:  1670 GKTRRYVDFPITDVLQMMGRAGRPQFDDQGKAVILVHDIKKDFYKKFLYEPFPVESSLLG 1729

Query:  1131 KLPDMLNAEIVLGTVQNLKDAVTWLGYTYLYIRMLRAPNLYG---ISHDALKEDPLLECH 1187
              L D LNAEI  GT+ + +DA+ ++ +TY + R++  P+ Y    +SHD++ +       
Sbjct:  1730 VLSDHLNAEIAGGTITSKQDAMDYITWTYFFRRLIMNPSYYNLSDVSHDSVNK------F 1783

Query:  1188 RADLIHTAALHLERSGLIKYDRKSGHMQVTELGRIASHYYCTHETMATYNQLLKPTLSEI 1247
              ++L+  + + LE S  I+    +  ++    GRIAS+YY  H+T+  + + LKP     
Sbjct:  1784 LSNLVEKSLVELEHSYCIEIGEDNRSIEPLTYGRIASYYYLKHQTVKMFKERLKPECGTE 1843

Query:  1248 ELFRVFSLSGEFRHITVRXXXXXXXXXXXXRAPIPIK-ESTDEPSAKVNILLQAYISQLK 1306
             EL  + S + E+  + VR              P+     S D P  K ++LLQA++S+  
Sbjct:  1844 ELLSILSDAEEYTDLPVRHNEDHMNSELAKCLPLESNPHSFDSPHTKAHLLLQAHLSRTM 1903

Query:  1307 LEGFALMSDMVFVTQSAARLMRAIFEIVLYRGWAQLADKALSLCKMVDRRMWQSMSPL 1364
             L      +D   V   A R+ +A+ ++  ++GW        SL +MV +  W   S L
Sbjct:  1904 LPCPDYDTDTKTVLDQALRVCQAMLDVAAHQGWLVTVLNITSLVQMVIQGRWLKDSSL 1961

 Score = 373 (136.4 bits), Expect = 1.1e-166, Sum P(8) = 1.1e-166
 Identities = 88/215 (40%), Positives = 126/215 (58%)

Query:   815 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 874
             DEIHLL +ERGPVLE +++RT      T++ VR+VGLS  L N +D+A  L I+ + GLF
Sbjct:  1453 DEIHLLGEERGPVLEVIVSRTNFISSHTEKPVRIVGLSTALANARDLADWLNIR-QMGLF 1511

Query:   875 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQLLVFVHSRKETGKT 934
              F  S RPV LE    G   +    R   MN   ++ +  H+    +L+FV SR++T  T
Sbjct:  1512 NFRPSVRPVPLEVHIQGFPGQHYCPRMASMNKPTFQAIRSHSPAKPVLIFVSSRRQTRLT 1571

Query:   935 A-RAIRDMCLEKDTLGQFLREGSASME-VLRTEADQVKNGELRDLLPYGFAIHHAGMTRV 992
             A   I  +  E+D   Q+L      ME ++ T    +++  L+  L +G  +HHAG+   
Sbjct:  1572 ALELIAFLATEEDPK-QWLNMDEREMENIIGT----IRDSNLKLTLAFGIGMHHAGLHER 1626

Query:   993 DRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
             DR  VE+LF +  IQVL++T+TLAWGVN PAH V+
Sbjct:  1627 DRKTVEELFVNCKIQVLIATSTLAWGVNFPAHLVI 1661

 Score = 325 (119.5 bits), Expect = 1.4e-197, Sum P(6) = 1.4e-197
 Identities = 82/229 (35%), Positives = 125/229 (54%)

Query:   341 QSESERQKLRDTMSEDPALAKILRQLDTGKNEDGDANDSADARQSTSIR-HQMXXXXXXX 399
             QSE E+Q ++    E+  +A+  R+   G  EDG+A +         +R H+        
Sbjct:   329 QSEQEKQLMKQYRREEKRIAR--REKKAG--EDGEATEGLLCFDPKELRIHREQALMNAR 384

Query:   400 XXXXXXTRQVLDLEDLQF-----SSG-----SHFMSNKRCELPDGSFRKQRKGYEEVHVP 449
                    ++  D+E +++     S       S F++  +  LP+G  R+  K YEEV +P
Sbjct:   385 NVPILSRQRDTDVEKIRYPHVYDSQAEAMRTSAFIAGAKMILPEGIQRENNKIYEEVKIP 444

Query:   450 ALKPKPMGPDETLVPIDKLPRYVQHAFEDFKTLNRIQSRLCKSALESDENLLLCAPTGAG 509
               +P P+G +E  V I  L    Q AF+  + LNRIQS + ++A  ++EN+L+CAPTGAG
Sbjct:   445 YTEPMPIGFEEKPVYIQDLDEIGQLAFKGMRRLNRIQSIVFETAYNTNENMLICAPTGAG 504

Query:   510 KTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNFGK 558
             KTN+A+L +L EI +H    G I  +EFKI+YVAPM++L  EM   F K
Sbjct:   505 KTNIAMLTVLHEIRQHFQ-QGVIKKNEFKIVYVAPMKALAAEMTNYFSK 552

 Score = 300 (110.7 bits), Expect = 1.1e-166, Sum P(8) = 1.1e-166
 Identities = 55/111 (49%), Positives = 83/111 (74%)

Query:   559 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 618
             DE+HLLH++RGPVLE+++ART+R +E+TQ  +R++GLSATLPNY DVAT L + P  GLF
Sbjct:   611 DEVHLLHEDRGPVLESIVARTLRQVESTQSMIRILGLSATLPNYLDVATFLHVNPCIGLF 670

Query:   619 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEH--AGRNQLLV 667
             +FD  FRPV L Q ++G+     +++   M+++ YE V++   AG +Q++V
Sbjct:   671 FFDGRFRPVPLGQTFLGIKSANKVQQLNNMDEVCYESVLKQVKAG-HQVMV 720

 Score = 239 (89.2 bits), Expect = 1.1e-166, Sum P(8) = 1.1e-166
 Identities = 44/95 (46%), Positives = 68/95 (71%)

Query:   668 STLRVELTISPDFQWDEKLHGG-SEGFWILVEDVDSEVVLHHEYFL-LKSRYATDD-HVV 724
             + LRV L+ISPDF W++++HG   E +WI VED  ++ + H EYFL LK +  + +  ++
Sbjct:  1194 TVLRVTLSISPDFSWNDQVHGTVGEPWWIWVEDPTNDHIYHSEYFLVLKKQVISKEAQLL 1253

Query:   725 KFFVPVFEPLPPQYFLRIVSDRWIGAETILPVSFR 759
              F +P+FEPLP QY++R VSDRW+GAE +  ++F+
Sbjct:  1254 VFTIPIFEPLPSQYYIRAVSDRWLGAEAVCIINFQ 1288

 Score = 188 (71.2 bits), Expect = 9.9e-100, Sum P(5) = 9.9e-100
 Identities = 44/109 (40%), Positives = 62/109 (56%)

Query:   559 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 618
             DEIHLL +ERGPVLE +++RT      T++ VR+VGLS  L N +D+A  L I+ + GLF
Sbjct:  1453 DEIHLLGEERGPVLEVIVSRTNFISSHTEKPVRIVGLSTALANARDLADWLNIR-QMGLF 1511

Query:   619 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQLLV 667
              F  S RPV LE    G   +    R   MN   ++ +  H+    +L+
Sbjct:  1512 NFRPSVRPVPLEVHIQGFPGQHYCPRMASMNKPTFQAIRSHSPAKPVLI 1560

 Score = 164 (62.8 bits), Expect = 1.4e-197, Sum P(6) = 1.4e-197
 Identities = 28/87 (32%), Positives = 52/87 (59%)

Query:  1600 IAPFYPQKREEGWWVVIGDPKTNSLLSIKRLT-LQQKAKIKLDFVAPN-PGHHSYALYFM 1657
             + P +P+ ++EGW++++G+     L+++KR+  ++    + + F  P  PG + Y LYFM
Sbjct:  2103 VTPRFPKSKDEGWFLILGEVDKRELIALKRVGYVRSHHMVSISFYTPEVPGRYIYTLYFM 2162

Query:  1658 SDAYLGCDQEYKFSIDVSEYYSGGESD 1684
             SD YLG DQ+Y   + V+      ++D
Sbjct:  2163 SDCYLGLDQQYDIHLHVTPASISAQAD 2189

 Score = 147 (56.8 bits), Expect = 6.3e-179, Sum P(6) = 6.3e-179
 Identities = 29/54 (53%), Positives = 37/54 (68%)

Query:   761 PRGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNFGK 814
             P GAGKTN+A+L +L EI +H    G I  +EFKI+YVAPM++L  EM   F K
Sbjct:   500 PTGAGKTNIAMLTVLHEIRQHFQ-QGVIKKNEFKIVYVAPMKALAAEMTNYFSK 552

 Score = 108 (43.1 bits), Expect = 2.1e-96, Sum P(5) = 2.1e-96
 Identities = 27/94 (28%), Positives = 51/94 (54%)

Query:   463 VPIDKLPRYVQHAFEDFKTLNRIQSRLCKSALESDENLLLCAPTGAGKTNVALLCMLQEI 522
             +P+  L      A  +F   N +Q+++  +   +D N+LL APTG+GKT  A L + +  
Sbjct:  1308 LPVTALGCEAYEALYNFSHFNPVQTQIFHTLYHTDCNVLLGAPTGSGKTVAAELAIFRVF 1367

Query:   523 GKHINADGTINADEFKIIYVAPMRSLVQEMVGNF 556
              K+  +         K +Y+AP+++LV+E + ++
Sbjct:  1368 NKYPTS---------KAVYIAPLKALVRERMDDW 1392

 Score = 103 (41.3 bits), Expect = 1.4e-197, Sum P(6) = 1.4e-197
 Identities = 19/48 (39%), Positives = 28/48 (58%)

Query:  1466 EAIRLIQACVDVLSSNGWLSPAVAAMEVAQMITQAMWSKDSYLKQLPH 1513
             +A+R+ QA +DV +  GWL   +    + QM+ Q  W KDS L  +PH
Sbjct:  1919 QALRVCQAMLDVAAHQGWLVTVLNITSLVQMVIQGRWLKDSSLLTIPH 1966

 Score = 91 (37.1 bits), Expect = 4.1e-78, Sum P(4) = 4.1e-78
 Identities = 41/211 (19%), Positives = 81/211 (38%)

Query:  1463 VDSEAIRLIQACVDVLSSNGWLSPAVAAMEVAQMITQAMWSKDSYLKQLPHFNADIIKRC 1522
             V   A R+++A  ++     W +     + ++++I + +W   S L+Q       I+ R 
Sbjct:  1082 VAQNAARIVRALFEIALRKRWPAMTYRLLNLSKVIDKRLWGWTSPLRQFSVLPPHILTRL 1141

Query:  1523 TEKGVETVFDIMXXXXXXXXXXXXXXXXXXADVARFCNRYPNIELSYEVLNKDRIXXXXX 1582
              EK + TV D +                    V +  ++ P++ +   +    R      
Sbjct:  1142 EEKNL-TV-DKLKDMRKDEIGHILHHVNIGLKVKQCVHQIPSVTMEASIQPITRTVLRVT 1199

Query:  1583 XXXXXXLDREDEVTGPVIAPFYPQKREEGWWVVIGDPKTNSL------LSIKRLTLQQKA 1636
                       D+V G V  P         WW+ + DP  + +      L +K+  + ++A
Sbjct:  1200 LSISPDFSWNDQVHGTVGEP---------WWIWVEDPTNDHIYHSEYFLVLKKQVISKEA 1250

Query:  1637 KIKLDFVAP--NPGHHSYALYFMSDAYLGCD 1665
             ++ L F  P   P    Y +  +SD +LG +
Sbjct:  1251 QL-LVFTIPIFEPLPSQYYIRAVSDRWLGAE 1280

 Score = 59 (25.8 bits), Expect = 1.1e-166, Sum P(8) = 1.1e-166
 Identities = 15/52 (28%), Positives = 29/52 (55%)

Query:   761 PRGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNF 812
             P G+GKT  A L + +   K+  +         K +Y+AP+++LV+E + ++
Sbjct:  1350 PTGSGKTVAAELAIFRVFNKYPTS---------KAVYIAPLKALVRERMDDW 1392

 Score = 45 (20.9 bits), Expect = 1.4e-197, Sum P(6) = 1.4e-197
 Identities = 19/61 (31%), Positives = 35/61 (57%)

Query:   291 EVLNILKSAGDDRDAENQLVLLLGYDCFDFIKMLKKYRQMILYCTLLASSQSESERQKLR 350
             ++L  +KS GD+   +++L  LLG D  + I+ L + R  I+   L  +S ++ + Q L+
Sbjct:   253 DMLASVKS-GDE--LQDELFELLGPDGLELIEKLLQNRVTIVDRFL--NSSNDHKLQALQ 307

Query:   351 D 351
             D
Sbjct:   308 D 308

 Score = 44 (20.5 bits), Expect = 7.7e-10, Sum P(4) = 7.7e-10
 Identities = 12/51 (23%), Positives = 26/51 (50%)

Query:   258 DKSLHPLDIDA----YWLQRRLSKIYDDAMVSQAKAGEVLNILKSAGDDRD 304
             ++S+ PL        Y+L+ +  K++ + +  +    E+L+IL  A +  D
Sbjct:  1807 NRSIEPLTYGRIASYYYLKHQTVKMFKERLKPECGTEELLSILSDAEEYTD 1857

 Score = 41 (19.5 bits), Expect = 1.1e-90, Sum P(6) = 1.1e-90
 Identities = 7/28 (25%), Positives = 15/28 (53%)

Query:  1419 LELATHIQPITRSTLRVELTISPDFQWD 1446
             +EL   + P  +S  + +L ++   +WD
Sbjct:  1405 IELTGDVTPDMKSIAKADLIVTTPEKWD 1432

 Score = 37 (18.1 bits), Expect = 4.3e-178, Sum P(6) = 4.3e-178
 Identities = 7/12 (58%), Positives = 8/12 (66%)

Query:   483 NRIQSRLCKSAL 494
             NRI S  CK +L
Sbjct:   135 NRITSHFCKDSL 146

 Score = 37 (18.1 bits), Expect = 6.6e-56, Sum P(3) = 6.6e-56
 Identities = 9/37 (24%), Positives = 18/37 (48%)

Query:   158 ENLLGSLAEERFALLVNLGKKITDFGAEQKST-TAEE 193
             EN++G++ +    L +  G  +   G  ++   T EE
Sbjct:  1597 ENIIGTIRDSNLKLTLAFGIGMHHAGLHERDRKTVEE 1633


>UNIPROTKB|F6Y2F0 [details] [associations]
            symbol:ASCC3 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
            InterPro:IPR003593 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00382 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            CTD:10973 GeneTree:ENSGT00700000104562 KO:K01529 InterPro:IPR004179
            Pfam:PF02889 SMART:SM00611 SMART:SM00973 GO:GO:0008026
            Ensembl:ENSCAFT00000005717 EMBL:AAEX03008562 RefSeq:XP_854167.1
            ProteinModelPortal:F6Y2F0 GeneID:475008 KEGG:cfa:475008 OMA:XAVYIAP
            Uniprot:F6Y2F0
        Length = 2202

 Score = 1005 (358.8 bits), Expect = 1.8e-197, Sum P(6) = 1.8e-197
 Identities = 196/443 (44%), Positives = 284/443 (64%)

Query:  1028 DRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQM 1087
             DR LVE+LF++ HI+VLV TATLAWGVNLPAH VIIKGTQIY  ++G +V+LG LDV+Q+
Sbjct:   790 DRNLVENLFSNGHIKVLVCTATLAWGVNLPAHAVIIKGTQIYAAKRGSFVDLGILDVMQI 849

Query:  1088 LGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMISKLPDMLNAEIVLGTVQN 1147
              GRAGRPQ+D  GEG++IT H +L +YL+LL  Q P+ESQ +  L D LNAEI LGTV N
Sbjct:   850 FGRAGRPQFDRFGEGIIITTHDKLSHYLTLLTQQNPIESQFLESLADNLNAEIALGTVTN 909

Query:  1148 LKDAVTWLGYTYLYIRMLRAPNLYGISHDALKEDPLLECHRADLIHTAALHLERSGLIKY 1207
             +++AV W+ YTYLY+RM   P +YGISH A + DP L  HR  L+      L+++ +I++
Sbjct:   910 VEEAVKWISYTYLYVRMRANPLVYGISHKAYQVDPTLAKHREQLVIEVGRKLDKARMIRF 969

Query:  1208 DRKSGHMQVTELGRIASHYYCTHETMATYNQLLKPTLSEIELFRVFSLSGEFRHITVRXX 1267
             + ++G+   T+LGR ASHYY  + T+ T+N+      +E ++F + S + EF  I VR  
Sbjct:   970 EERTGYFSSTDLGRTASHYYIKYNTIETFNEFFDAHKTESDIFAIVSKAEEFDQIKVREE 1029

Query:  1268 XXXXXXXXXXR-APIPIKESTDEPSAKVNILLQAYISQLKLEGFALMSDMVFVTQSAARL 1326
                           +      +    K+NILLQ YIS+ +++ F+L+SD  +V Q+AAR+
Sbjct:  1030 EIEELDALLNNFCELAAPGGVENSYGKINILLQTYISRGEMDSFSLISDSAYVAQNAARI 1089

Query:  1327 MRAIFEIVLYRGWAQLADKALSLCKMVDRRMWQSMSPLRQFRXXXXXXXXXXXXXNFPWE 1386
             +RA+FEI L + W  +  + L+L K++D+R+W   SPLRQF              N   +
Sbjct:  1090 VRALFEIALRKRWPAMTYRLLNLSKVIDKRLWGWASPLRQFSVLPPHILTRLEEKNLTVD 1149

Query:  1387 RLYDLGPNEIGELIRVPKLGKTIHKYVHQFPKLELATHIQPITRSTLRVELTISPDFQWD 1446
             +L D+  +EIG ++    +G  + + VHQ P + +   IQPITR+ LRV L+I PDF W+
Sbjct:  1150 KLKDMRKDEIGHMLHHVNIGLKVKQCVHQIPSVTMEASIQPITRTVLRVTLSICPDFTWN 1209

Query:  1447 EKLHGG-SEGFWILVEDVDSEAI 1468
             +++HG   E +WI VED  ++ I
Sbjct:  1210 DQVHGTVGEPWWIWVEDPTNDHI 1232

 Score = 548 (198.0 bits), Expect = 1.8e-197, Sum P(6) = 1.8e-197
 Identities = 105/215 (48%), Positives = 150/215 (69%)

Query:   815 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 874
             DE+HLLH++RGPVLE+++ART+R +E+TQ  +R++GLSATLPNY DVAT L + P  GLF
Sbjct:   611 DEVHLLHEDRGPVLESIVARTLRQVESTQSMIRILGLSATLPNYLDVATFLHVNPCIGLF 670

Query:   875 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEH--AGRNQLLVFVHSRKETG 932
             YFD  FRPV L Q ++GV     +++   M+++ YE V++   AG +Q++VFVH+R  T 
Sbjct:   671 YFDGRFRPVPLGQTFLGVKSANKVQQLNNMDEVCYESVLKQVKAG-HQVMVFVHARNATV 729

Query:   933 KTARAIRDMCLEKDTLGQFLREGSASMEVLRTEADQVKNGELRDLLPYGFAIHHAGMTRV 992
             +TA ++ +       +  FL    +       +  + +N ++R+L P GF+IHHAGM R 
Sbjct:   730 RTAMSLIERAKNSGQISCFLPSQGSEYGHAEKQVQKSRNKQVRELFPDGFSIHHAGMLRQ 789

Query:   993 DRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
             DR LVE+LF++ HI+VLV TATLAWGVNLPAH V+
Sbjct:   790 DRNLVENLFSNGHIKVLVCTATLAWGVNLPAHAVI 824

 Score = 529 (191.3 bits), Expect = 1.3e-165, Sum P(8) = 1.3e-165
 Identities = 122/358 (34%), Positives = 196/358 (54%)

Query:  1014 TLAWGVNLPAHTVV---DRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYN 1070
             TLA+G+ +  H  +   DR  VE+LF +  +QVL++T+TLAWGVN PAH VIIKGT+ Y+
Sbjct:  1611 TLAFGIGMH-HAGLHERDRKTVEELFVNCKVQVLIATSTLAWGVNFPAHLVIIKGTEYYD 1669

Query:  1071 PEKGRWVELGALDVLQMLGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMIS 1130
              +  R+V+    DVLQM+GRAGRPQ+D +G+ V++ +  +  +Y   L    PVES ++ 
Sbjct:  1670 GKTRRYVDFPITDVLQMMGRAGRPQFDDQGKAVILVHDIKKDFYKKFLYEPFPVESSLLG 1729

Query:  1131 KLPDMLNAEIVLGTVQNLKDAVTWLGYTYLYIRMLRAPNLYG---ISHDALKEDPLLECH 1187
              L D LNAEI  GT+ + +DA+ ++ +TY + R++  P+ Y    +SHD++ +       
Sbjct:  1730 VLSDHLNAEIAGGTITSKQDAMDYITWTYFFRRLIMNPSYYNLSDVSHDSVNK------F 1783

Query:  1188 RADLIHTAALHLERSGLIKYDRKSGHMQVTELGRIASHYYCTHETMATYNQLLKPTLSEI 1247
              + L+  + + LE S  I+    +  ++    GRIAS+YY  H+T+  + + LKP     
Sbjct:  1784 LSSLVEKSLVELEHSYCIEIGEDNRSIEPLTYGRIASYYYLKHQTVKMFKERLKPECGTE 1843

Query:  1248 ELFRVFSLSGEFRHITVRXXXXXXXXXXXXRAPIPIK-ESTDEPSAKVNILLQAYISQLK 1306
             EL  + S + E+  + VR              P+     S D P  K ++LLQA++S+  
Sbjct:  1844 ELLSILSDAEEYTDLPVRHNEDHMNSELAKCLPLESNPHSFDSPHTKAHLLLQAHLSRTM 1903

Query:  1307 LEGFALMSDMVFVTQSAARLMRAIFEIVLYRGWAQLADKALSLCKMVDRRMWQSMSPL 1364
             L      +D   V   A R+ +A+ ++   +GW   A    +L +MV +  W   S L
Sbjct:  1904 LPCPDYDTDTKTVLDQALRVCQAMLDVAANQGWLVTALNITNLVQMVIQGRWLKDSSL 1961

 Score = 367 (134.2 bits), Expect = 1.3e-165, Sum P(8) = 1.3e-165
 Identities = 87/215 (40%), Positives = 125/215 (58%)

Query:   815 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 874
             DEIHLL +ERGPVLE +++RT      T++ VR+VGLS  L N +D+A  L I  + GLF
Sbjct:  1453 DEIHLLGEERGPVLEVIVSRTNFISSHTEKPVRIVGLSTALANARDLADWLNIH-QMGLF 1511

Query:   875 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQLLVFVHSRKETGKT 934
              F  S RPV LE    G   +    R   MN   ++ +  H+    +L+FV SR++T  T
Sbjct:  1512 NFRPSVRPVPLEVHIQGFPGQHYCPRMASMNKPTFQAIRSHSPAKPVLIFVSSRRQTRLT 1571

Query:   935 A-RAIRDMCLEKDTLGQFLREGSASME-VLRTEADQVKNGELRDLLPYGFAIHHAGMTRV 992
             A   I  +  E+D   Q+L      ME ++ T    +++  L+  L +G  +HHAG+   
Sbjct:  1572 ALELIAFLATEEDPK-QWLNMDEREMENIIGT----LRDSNLKLTLAFGIGMHHAGLHER 1626

Query:   993 DRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
             DR  VE+LF +  +QVL++T+TLAWGVN PAH V+
Sbjct:  1627 DRKTVEELFVNCKVQVLIATSTLAWGVNFPAHLVI 1661

 Score = 327 (120.2 bits), Expect = 1.8e-197, Sum P(6) = 1.8e-197
 Identities = 84/229 (36%), Positives = 124/229 (54%)

Query:   341 QSESERQKLRDTMSEDPALAKILRQLDTGKNEDGDANDSADARQSTSIRHQMXXXXXXXX 400
             QSE E+Q ++    E+  +A+  R+   G  EDGD  +         +R Q         
Sbjct:   329 QSEQEKQLMKQYRREEKRIAR--RERKAG--EDGDIAEGLMCFDPKELRIQREQALLNAR 384

Query:   401 XXXXXTRQV-LDLEDLQF-----SSG-----SHFMSNKRCELPDGSFRKQRKGYEEVHVP 449
                  +RQ   D+E +++     S       S F++  +  LP+G  R+  K YEEV +P
Sbjct:   385 SVPILSRQRDTDVEKIRYPHVYDSQAEAMRTSAFIAGAKMILPEGIQRENNKMYEEVKIP 444

Query:   450 ALKPKPMGPDETLVPIDKLPRYVQHAFEDFKTLNRIQSRLCKSALESDENLLLCAPTGAG 509
               +P P+G +E  V I  L    Q AF+  + LNRIQS + ++A  ++EN+L+CAPTGAG
Sbjct:   445 YSEPMPIGFEEKPVYIQDLDEIGQLAFKGMRRLNRIQSIVFETAYNTNENMLICAPTGAG 504

Query:   510 KTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNFGK 558
             KTN+A+L +L EI +H    G I  +EFKI+YVAPM++L  EM   F K
Sbjct:   505 KTNIAMLTVLHEIRQHFQ-QGVIKKNEFKIVYVAPMKALAAEMTNYFSK 552

 Score = 305 (112.4 bits), Expect = 1.3e-165, Sum P(8) = 1.3e-165
 Identities = 57/111 (51%), Positives = 83/111 (74%)

Query:   559 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 618
             DE+HLLH++RGPVLE+++ART+R +E+TQ  +R++GLSATLPNY DVAT L + P  GLF
Sbjct:   611 DEVHLLHEDRGPVLESIVARTLRQVESTQSMIRILGLSATLPNYLDVATFLHVNPCIGLF 670

Query:   619 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEH--AGRNQLLV 667
             YFD  FRPV L Q ++GV     +++   M+++ YE V++   AG +Q++V
Sbjct:   671 YFDGRFRPVPLGQTFLGVKSANKVQQLNNMDEVCYESVLKQVKAG-HQVMV 720

 Score = 233 (87.1 bits), Expect = 1.3e-165, Sum P(8) = 1.3e-165
 Identities = 43/95 (45%), Positives = 67/95 (70%)

Query:   668 STLRVELTISPDFQWDEKLHGG-SEGFWILVEDVDSEVVLHHEYFL-LKSRYATDD-HVV 724
             + LRV L+I PDF W++++HG   E +WI VED  ++ + H EYFL LK +  + +  ++
Sbjct:  1194 TVLRVTLSICPDFTWNDQVHGTVGEPWWIWVEDPTNDHIYHSEYFLVLKKQVISKEAQLL 1253

Query:   725 KFFVPVFEPLPPQYFLRIVSDRWIGAETILPVSFR 759
              F +P+FEPLP QY++R VSDRW+GAE +  ++F+
Sbjct:  1254 VFTIPIFEPLPSQYYIRAVSDRWLGAEAVCIINFQ 1288

 Score = 185 (70.2 bits), Expect = 4.4e-99, Sum P(5) = 4.4e-99
 Identities = 44/109 (40%), Positives = 61/109 (55%)

Query:   559 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 618
             DEIHLL +ERGPVLE +++RT      T++ VR+VGLS  L N +D+A  L I  + GLF
Sbjct:  1453 DEIHLLGEERGPVLEVIVSRTNFISSHTEKPVRIVGLSTALANARDLADWLNIH-QMGLF 1511

Query:   619 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQLLV 667
              F  S RPV LE    G   +    R   MN   ++ +  H+    +L+
Sbjct:  1512 NFRPSVRPVPLEVHIQGFPGQHYCPRMASMNKPTFQAIRSHSPAKPVLI 1560

 Score = 160 (61.4 bits), Expect = 1.8e-197, Sum P(6) = 1.8e-197
 Identities = 28/92 (30%), Positives = 54/92 (58%)

Query:  1600 IAPFYPQKREEGWWVVIGDPKTNSLLSIKRLT-LQQKAKIKLDFVAPN-PGHHSYALYFM 1657
             + P +P+ ++EGW++++G+     L+++KR+  ++    + + F  P  PG + Y LY M
Sbjct:  2103 VTPRFPKLKDEGWFLILGEVDKRELIALKRVGYVRNHHVVSISFYTPELPGRYIYTLYLM 2162

Query:  1658 SDAYLGCDQEYKFSIDVSEYYSGGESDSDVEK 1689
             SD YLG DQ+Y   + V+E     + + +V +
Sbjct:  2163 SDCYLGLDQQYDLHLHVTEASVSAQVNEEVSE 2194

 Score = 147 (56.8 bits), Expect = 1.4e-178, Sum P(6) = 1.4e-178
 Identities = 29/54 (53%), Positives = 37/54 (68%)

Query:   761 PRGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNFGK 814
             P GAGKTN+A+L +L EI +H    G I  +EFKI+YVAPM++L  EM   F K
Sbjct:   500 PTGAGKTNIAMLTVLHEIRQHFQ-QGVIKKNEFKIVYVAPMKALAAEMTNYFSK 552

 Score = 109 (43.4 bits), Expect = 2.5e-95, Sum P(5) = 2.5e-95
 Identities = 28/94 (29%), Positives = 51/94 (54%)

Query:   463 VPIDKLPRYVQHAFEDFKTLNRIQSRLCKSALESDENLLLCAPTGAGKTNVALLCMLQEI 522
             +PI  L      A  +F   N +Q+++  +   +D N+LL APTG+GKT  A L + +  
Sbjct:  1308 LPITALGCEAYEALYNFSHFNPVQTQIFHTLYHTDCNVLLGAPTGSGKTVAAELAIFRVF 1367

Query:   523 GKHINADGTINADEFKIIYVAPMRSLVQEMVGNF 556
              K+  +         K +Y+AP+++LV+E + ++
Sbjct:  1368 NKYPTS---------KAVYIAPLKALVRERMDDW 1392

 Score = 103 (41.3 bits), Expect = 1.8e-197, Sum P(6) = 1.8e-197
 Identities = 19/48 (39%), Positives = 30/48 (62%)

Query:  1466 EAIRLIQACVDVLSSNGWLSPAVAAMEVAQMITQAMWSKDSYLKQLPH 1513
             +A+R+ QA +DV ++ GWL  A+    + QM+ Q  W KDS L  +P+
Sbjct:  1919 QALRVCQAMLDVAANQGWLVTALNITNLVQMVIQGRWLKDSSLLSIPN 1966

 Score = 88 (36.0 bits), Expect = 1.6e-79, Sum P(4) = 1.6e-79
 Identities = 43/225 (19%), Positives = 87/225 (38%)

Query:  1451 GGSEGFWILVED--VDSEAIRLIQACVDVLSSNGWLSPAVAAMEVAQMITQAMWSKDSYL 1508
             G  + F ++ +   V   A R+++A  ++     W +     + ++++I + +W   S L
Sbjct:  1068 GEMDSFSLISDSAYVAQNAARIVRALFEIALRKRWPAMTYRLLNLSKVIDKRLWGWASPL 1127

Query:  1509 KQLPHFNADIIKRCTEKGVETVFDIMXXXXXXXXXXXXXXXXXXADVARFCNRYPNIELS 1568
             +Q       I+ R  EK + TV D +                    V +  ++ P++ + 
Sbjct:  1128 RQFSVLPPHILTRLEEKNL-TV-DKLKDMRKDEIGHMLHHVNIGLKVKQCVHQIPSVTME 1185

Query:  1569 YEVLNKDRIXXXXXXXXXXXLDREDEVTGPVIAPFYPQKREEGWWVVIGDPKTNSL---- 1624
               +    R                D+V G V  P         WW+ + DP  + +    
Sbjct:  1186 ASIQPITRTVLRVTLSICPDFTWNDQVHGTVGEP---------WWIWVEDPTNDHIYHSE 1236

Query:  1625 --LSIKRLTLQQKAKIKLDFVAP--NPGHHSYALYFMSDAYLGCD 1665
               L +K+  + ++A++ L F  P   P    Y +  +SD +LG +
Sbjct:  1237 YFLVLKKQVISKEAQL-LVFTIPIFEPLPSQYYIRAVSDRWLGAE 1280

 Score = 59 (25.8 bits), Expect = 1.3e-165, Sum P(8) = 1.3e-165
 Identities = 15/52 (28%), Positives = 29/52 (55%)

Query:   761 PRGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNF 812
             P G+GKT  A L + +   K+  +         K +Y+AP+++LV+E + ++
Sbjct:  1350 PTGSGKTVAAELAIFRVFNKYPTS---------KAVYIAPLKALVRERMDDW 1392

 Score = 49 (22.3 bits), Expect = 1.8e-197, Sum P(6) = 1.8e-197
 Identities = 20/61 (32%), Positives = 35/61 (57%)

Query:   291 EVLNILKSAGDDRDAENQLVLLLGYDCFDFIKMLKKYRQMILYCTLLASSQSESERQKLR 350
             ++L  +KS GD+   +N+L  LLG D  + I+ L + R  I+   L  +S ++ + Q L+
Sbjct:   253 DMLASVKS-GDE--LQNELFELLGPDGLELIEKLLQNRITIVDRFL--NSSNDHKLQALQ 307

Query:   351 D 351
             D
Sbjct:   308 D 308

 Score = 44 (20.5 bits), Expect = 1.2e-09, Sum P(4) = 1.2e-09
 Identities = 12/51 (23%), Positives = 26/51 (50%)

Query:   258 DKSLHPLDIDA----YWLQRRLSKIYDDAMVSQAKAGEVLNILKSAGDDRD 304
             ++S+ PL        Y+L+ +  K++ + +  +    E+L+IL  A +  D
Sbjct:  1807 NRSIEPLTYGRIASYYYLKHQTVKMFKERLKPECGTEELLSILSDAEEYTD 1857

 Score = 41 (19.5 bits), Expect = 5.6e-92, Sum P(6) = 5.6e-92
 Identities = 7/28 (25%), Positives = 15/28 (53%)

Query:  1419 LELATHIQPITRSTLRVELTISPDFQWD 1446
             +EL   + P  +S  + +L ++   +WD
Sbjct:  1405 IELTGDVTPDMKSIAKADLIVTTPEKWD 1432

 Score = 39 (18.8 bits), Expect = 3.7e-55, Sum P(3) = 3.7e-55
 Identities = 10/37 (27%), Positives = 18/37 (48%)

Query:   158 ENLLGSLAEERFALLVNLGKKITDFGAEQKST-TAEE 193
             EN++G+L +    L +  G  +   G  ++   T EE
Sbjct:  1597 ENIIGTLRDSNLKLTLAFGIGMHHAGLHERDRKTVEE 1633

 Score = 38 (18.4 bits), Expect = 1.9e-177, Sum P(6) = 1.9e-177
 Identities = 10/36 (27%), Positives = 18/36 (50%)

Query:   335 TLLASSQSESERQKLRDTMSEDPALAKILRQLDTGK 370
             T L     +SE Q + + +++    AK +  +D GK
Sbjct:    52 TFLNEKLEKSEIQSVNEDLNDILQAAKQIVGIDNGK 87


>GENEDB_PFALCIPARUM|PFD1060w [details] [associations]
            symbol:PFD1060w "u5 small nuclear
            ribonucleoprotein-specific protein, putative" species:5833
            "Plasmodium falciparum" [GO:0005681 "spliceosomal complex"
            evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00382 SMART:SM00490 GO:GO:0005524 GO:GO:0005681
            GO:GO:0003676 EMBL:AL844503 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889 SMART:SM00611
            SMART:SM00973 HOGENOM:HOG000157749 GO:GO:0004004 KO:K01509
            RefSeq:XP_001351528.1 ProteinModelPortal:Q8IFP1 IntAct:Q8IFP1
            MINT:MINT-1569750 PRIDE:Q8IFP1 EnsemblProtists:PFD1060w:mRNA
            GeneID:812456 KEGG:pfa:PFD1060w EuPathDB:PlasmoDB:PF3D7_0422500
            ProtClustDB:CLSZ2515128 Uniprot:Q8IFP1
        Length = 2874

 Score = 609 (219.4 bits), Expect = 1.9e-184, Sum P(8) = 1.9e-184
 Identities = 110/190 (57%), Positives = 150/190 (78%)

Query:   838 NIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLFYFDNSFRPVALEQQYIGVTEKKA 897
             +I   ++ +RLVGLSATLPNY+DV   LR   E G+FYFD+SFRPV +EQ YIG+ EKK 
Sbjct:   959 HISIRRKKIRLVGLSATLPNYEDVGIFLRAHIERGIFYFDHSFRPVQIEQHYIGIKEKKG 1018

Query:   898 LKRFQVMNDIVYEKVMEHAGRNQLLVFVHSRKETGKTARAIRDMCLEKDTLGQFLREGSA 957
             +K++ +MN++ YEKV+E AG+NQ+L+FVHSRKET +T++ + D  ++ D L +FL +   
Sbjct:  1019 IKKYALMNELTYEKVLEEAGKNQILIFVHSRKETYRTSKLLIDRFMKSDNLSKFLIDKKI 1078

Query:   958 SMEVLRTEADQVKNGELRDLLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAW 1017
             S E+L +E + V N EL+++LP+GF IHHAG+ R+DR LVEDLF+DRHIQVLV T+TLAW
Sbjct:  1079 SSEILLSEKEHVINEELKEILPFGFGIHHAGLKRLDRKLVEDLFSDRHIQVLVCTSTLAW 1138

Query:  1018 GVNLPAHTVV 1027
             G+NLPAHTV+
Sbjct:  1139 GINLPAHTVI 1148

 Score = 536 (193.7 bits), Expect = 5.9e-197, Sum P(9) = 5.9e-197
 Identities = 104/279 (37%), Positives = 167/279 (59%)

Query:  1190 DLIHTAALHLERSGLIKYDRKSGHMQVTELGRIASHYYCTHETMATYNQLLKPTLSEIEL 1249
             +++++  L LE+  LIKY++K   +  T +G+I+S+YY  ++++  YN+ L    +EI+L
Sbjct:  1353 NILYSCFLILEKYDLIKYNKKLNTVSSTYIGKISSYYYVDYKSIDIYNKKLNKYTNEIDL 1412

Query:  1250 FRVFSLSGEFRHITVRXXXXXXXXXXXXRAPIPIKESTDEPSAKVNILLQAYISQLKLEG 1309
              ++F++S EF++I +R            + PIP+KES + P  K+NILLQ Y+S + L G
Sbjct:  1413 LKIFTMSNEFKNIFIRDEEKTELSIIMEKLPIPVKESINIPYTKINILLQLYLSNIILNG 1472

Query:  1310 FALMSDMVFVTQSAARLMRAIFEIVLYRGWAQLADKALSLCKMVDRRMWQSMSPLRQFRX 1369
             + + +DMV++ Q+A R+ R+ FEI L +    L    L  CKM++RRMW +M+PLRQF  
Sbjct:  1473 YIINADMVYIHQNALRIFRSFFEISLKKNSYNLIKLTLKFCKMIERRMWSTMTPLRQFGL 1532

Query:  1370 XXXXXXXXXXXXNFPWERLYDLGPNEIGELIRVPKLGKTIHKYVHQFPKLELATHIQPIT 1429
                         N  ++    +  NE   + +  K+ K I+K VH FPKLEL  +IQPI 
Sbjct:  1533 LSTELIRIIEKKNITFKNYLTMNLNEYITIFKNKKIAKNIYKLVHHFPKLELNAYIQPIN 1592

Query:  1430 RSTLRVELTISPDFQWDEKLHGGSEGFWILVEDVDSEAI 1468
                L+V+L I+PDF ++ K HG    FW+ V D+ +E+I
Sbjct:  1593 HKILKVDLNIAPDFIYNPKYHGYFMLFWVFVFDISNESI 1631

 Score = 501 (181.4 bits), Expect = 5.9e-197, Sum P(9) = 5.9e-197
 Identities = 98/195 (50%), Positives = 141/195 (72%)

Query:   992 VDRTLVED-LFADR-HI--QVLVSTATLAWGVNLPAHTVVDRTLVEDLFADRHIQVLVST 1047
             +D+ +  + L +++ H+  + L       +G++      +DR LVEDLF+DRHIQVLV T
Sbjct:  1074 IDKKISSEILLSEKEHVINEELKEILPFGFGIHHAGLKRLDRKLVEDLFSDRHIQVLVCT 1133

Query:  1048 ATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQMLGRAGRPQYDTKGEGVLITN 1107
             +TLAWG+NLPAHTVIIKGT +YN   G + EL ++DVLQM+GR+GRPQYD  G+ ++IT+
Sbjct:  1134 STLAWGINLPAHTVIIKGTSVYNINIGDFDELSSMDVLQMVGRSGRPQYDKSGKAIIITD 1193

Query:  1108 HSELQYYLSLLNHQLPVESQMISKLPDMLNAEIVLGTVQNLKDAVTWLGYTYLYIRMLRA 1167
             H  LQ YLSL N QL +ES ++  + +++NAEIVL  +QN+ DA+ WL +TY+YIRML+ 
Sbjct:  1194 HKNLQLYLSLNNEQLFIESTLLHNIVNIINAEIVLKNIQNMDDAMNWLEHTYMYIRMLKC 1253

Query:  1168 PNLYGI---SHDALK 1179
             P+LYG+   S+D +K
Sbjct:  1254 PSLYGVIINSNDKIK 1268

 Score = 334 (122.6 bits), Expect = 5.9e-197, Sum P(9) = 5.9e-197
 Identities = 77/217 (35%), Positives = 123/217 (56%)

Query:  1466 EAIRLIQACVDVLSSNGWLSPAVAAMEVAQMITQAMWSKD-SYLKQLPHFNADIIKRCTE 1524
             +A +LI + +DV+SSN  L+  +  MEV+QM+TQ+M S D S L QLPHF+  +IK+  +
Sbjct:  2658 KAYKLINSLIDVISSNNILNFCLFVMEVSQMLTQSMKSTDQSNLYQLPHFDEHLIKKAND 2717

Query:  1525 KGVETVFDIMXXXXX-XXXXXXXXXXXXXADVARFCNRYPNIELSYEV-LNKD-RIXXXX 1581
               +  V+D++                   +++A  CN +P IE+ YE+ L+K  ++    
Sbjct:  2718 LEILDVYDLINAEDEPRDILLKHLNEKQRSEIANVCNIFPIIEVQYEIDLDKSYKVNEIA 2777

Query:  1582 XXXXXXXLDREDEVTGPVIAPFYPQKREEGWWVVIGDPKTNSLLSIKRLTLQQKAK-IKL 1640
                     D  D+      + + P ++EE WW+VIG  K N LLSIK+L+L +    IK+
Sbjct:  2778 QLNLTIERDLTDDAVIFAHSLYLPFEKEEMWWIVIGIKKMNLLLSIKKLSLLKSVNNIKI 2837

Query:  1641 DFVAPN-PGHHSYALYFMSDAYLGCDQEYKFSIDVSE 1676
             +F  P+ P  +   +Y ++D Y+GCDQEY+F I+V E
Sbjct:  2838 NFELPDKPNTYDVVIYVINDCYVGCDQEYEFKINVEE 2874

 Score = 280 (103.6 bits), Expect = 5.9e-197, Sum P(9) = 5.9e-197
 Identities = 55/126 (43%), Positives = 84/126 (66%)

Query:   582 NIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLFYFDNSFRPVALEQQYIGVTEKKA 641
             +I   ++ +RLVGLSATLPNY+DV   LR   E G+FYFD+SFRPV +EQ YIG+ EKK 
Sbjct:   959 HISIRRKKIRLVGLSATLPNYEDVGIFLRAHIERGIFYFDHSFRPVQIEQHYIGIKEKKG 1018

Query:   642 LKRFQVMNDIVYEKVMEHAGRNQLLVST-LRVELTISPDFQWDEKLHGGSEGFWILVEDV 700
             +K++ +MN++ YEKV+E AG+NQ+L+    R E   +     D  +   +   +++ + +
Sbjct:  1019 IKKYALMNELTYEKVLEEAGKNQILIFVHSRKETYRTSKLLIDRFMKSDNLSKFLIDKKI 1078

Query:   701 DSEVVL 706
              SE++L
Sbjct:  1079 SSEILL 1084

 Score = 275 (101.9 bits), Expect = 2.9e-157, Sum P(8) = 2.9e-157
 Identities = 68/240 (28%), Positives = 126/240 (52%)

Query:  1025 TVVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDV 1084
             T +++ +VE LF  + IQ+L+ +    + +N+ A+ VII  T I +    +  +    ++
Sbjct:  2315 TEIEKKIVEILFDKKTIQILIVSYDYIYSLNVYANNVIILDTIITHFHNNKEEDYSIQNI 2374

Query:  1085 LQMLGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMISKLPDMLNAEIVLGT 1144
             L+M+  AGR   DTK    + T  ++ +YY + +   L VES +   LP+ LN EIV+ T
Sbjct:  2375 LEMISYAGRQNEDTKAFVYIYTYITKKEYYKNFIYEPLTVESNIEDNLPNFLNNEIVMST 2434

Query:  1145 VQNLKDAVTWLGYTYLYIRMLRAPNLYGISHDALKEDPLLECHRADLIHTAALHLERSGL 1204
             ++N +DA+ WL +++ Y R+ + PN YG+    +  + + + + ++LI      L  +  
Sbjct:  2435 IENYQDAIDWLTWSFFYRRIKKNPNYYGLK--GISNEHISD-YLSELIENNMEILSFANC 2491

Query:  1205 IKYDRKSGHMQVTELGRIASHYYCTHETMATYNQ--LLKPTLSEIELFRVFSLSGEFRHI 1262
             I  + ++  ++   LG I+S Y   +  +  +NQ  L   TL +  +F +  LS  F  I
Sbjct:  2492 INIEEQTMDIKPCNLGIISSFYNLDYHIIHFFNQYVLSLKTLKKSRIFEIICLSNIFNDI 2551

 Score = 220 (82.5 bits), Expect = 5.9e-197, Sum P(9) = 5.9e-197
 Identities = 45/103 (43%), Positives = 67/103 (65%)

Query:   458 PDET-LVPIDKLPRYVQHAFE--DFKTLNRIQSRLCKSALES-DENLLLCAPTGAGKTNV 513
             P+E  L+ I++LP +    F   +   LN IQS++   A    +EN+L+CAPTG+GKTN+
Sbjct:   688 PEEIKLIHINELPEWTHEVFSCVNITKLNPIQSKVYDVAFNKYEENMLICAPTGSGKTNI 747

Query:   514 ALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNF 556
             ALLC+L  I  +    G IN  +FKI+Y++PM++LV E V +F
Sbjct:   748 ALLCILNVINSYRLTSGNINRKDFKIVYISPMKALVNEQVQSF 790

 Score = 193 (73.0 bits), Expect = 5.9e-197, Sum P(9) = 5.9e-197
 Identities = 65/223 (29%), Positives = 115/223 (51%)

Query:     1 MADAAARQLQYEYKANSNLVLQADVRLIERRSRDEATGEVCSLVGKLEGTRMGDRFMRTK 60
             MA+   +  ++EY+ NSNLVLQ +  +   +   E TGE  SLVG+L+  +MGD+   + 
Sbjct:     1 MAEEYEKFKRFEYRMNSNLVLQREGPISNTK---EPTGESESLVGRLK-YKMGDKVEYSN 56

Query:    61 PIKA--------EERKVKRQKR----DEAQYDFT-----RMKGATLLSEGVDEMVGIIYR 103
               K         +E  + R KR    D+ +Y+       R K  ++L+  ++++   +Y+
Sbjct:    57 KNKKNIMLVQDNKEMAINRNKRKDIFDDDKYNRRSNKKIRHKEKSVLNVNIEDI--FLYK 114

Query:   104 PKTQETRQTYEVLLSFIQEALGDQPRDILCGAADEVLTVLKNDRMXXXXXXXXTENLLGS 163
             P T+ T + Y  L+S I+  LGD   DI+  A +E+L +LKN+ +         E+ L  
Sbjct:   115 PTTKYTEEIYTKLMSKIRFLLGDNTGDIINSACNEILYILKNEELNNEEKKKQVESELEI 174

Query:   164 -LAEERFALLVNLGKKITDFGAEQKSTTAEENIDDTYGINVQF 205
              + ++ F  + NL K+I DF  +++     E +++  G+ V F
Sbjct:   175 YINDDIFIEINNLSKEIYDFNKQEEG----EYVENDEGVAVIF 213

 Score = 186 (70.5 bits), Expect = 5.9e-197, Sum P(9) = 5.9e-197
 Identities = 44/123 (35%), Positives = 72/123 (58%)

Query:   249 DAEGTGRKKDKSLHPLDIDAYWLQRRLSKIYDDAMVSQAKAGEVLNILKSAGDDRDAENQ 308
             D E    + +  L+   ID++WLQR L+KI+ D  +   K  EVLN+L +  D +++EN+
Sbjct:   351 DEENKNVQDNDELNINVIDSHWLQRELNKIFPDPSLCLDKEKEVLNVL-NIYDIQESENK 409

Query:   309 LVLLLGYDCFDFIKMLKKYRQMILYCTLLASSQSESERQKLRDTMSEDPALAKILRQLDT 368
             L+ +L Y+ F   ++L K R  I YCTLL  +Q+E E+++++  M +      IL +L  
Sbjct:   410 LMHILKYENFHIARVLIKNRWKIYYCTLLGQAQTEEEKEEIKKEMKKTEEGQDILDELCN 469

Query:   369 GKN 371
              KN
Sbjct:   470 FKN 472

 Score = 144 (55.7 bits), Expect = 1.6e-176, Sum P(8) = 1.6e-176
 Identities = 26/52 (50%), Positives = 37/52 (71%)

Query:   761 PRGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNF 812
             P G+GKTN+ALLC+L  I  +    G IN  +FKI+Y++PM++LV E V +F
Sbjct:   739 PTGSGKTNIALLCILNVINSYRLTSGNINRKDFKIVYISPMKALVNEQVQSF 790

 Score = 124 (48.7 bits), Expect = 2.2e-108, Sum P(10) = 2.2e-108
 Identities = 22/51 (43%), Positives = 33/51 (64%)

Query:   670 LRVELTISPDFQWDEKLHGGSEGFWILVEDVDSEVVLHHEYFLLKSRYATD 720
             L+V+L I+PDF ++ K HG    FW+ V D+ +E +LH++ F LK  Y  D
Sbjct:  1596 LKVDLNIAPDFIYNPKYHGYFMLFWVFVFDISNESILHYDLFTLKKNYKND 1646

 Score = 84 (34.6 bits), Expect = 8.6e-105, Sum P(10) = 8.6e-105
 Identities = 17/61 (27%), Positives = 33/61 (54%)

Query:   967 DQVKNGELRDLLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTV 1026
             D + +  LR  +  G    H  MT +++ +VE LF  + IQ+L+ +    + +N+ A+ V
Sbjct:  2292 DYINDKMLRQFMKKGICYLHNNMTEIEKKIVEILFDKKTIQILIVSYDYIYSLNVYANNV 2351

Query:  1027 V 1027
             +
Sbjct:  2352 I 2352

 Score = 82 (33.9 bits), Expect = 2.0e-124, Sum P(10) = 2.0e-124
 Identities = 13/35 (37%), Positives = 24/35 (68%)

Query:   720 DDHVVKFFVPVFEPLPPQYFLRIVSDRWIGAETIL 754
             DDHV+ FF+P+ +   P Y ++++SD+W+  E  +
Sbjct:  1671 DDHVLTFFLPINDN--PFYIVKVISDKWLECEATI 1703

 Score = 75 (31.5 bits), Expect = 5.9e-197, Sum P(9) = 5.9e-197
 Identities = 16/28 (57%), Positives = 22/28 (78%)

Query:   559 DEIHLLHDERGPVLEALIARTIRNIEAT 586
             DEIHLL++ RG VLE++IAR  R ++ T
Sbjct:   850 DEIHLLNEMRGNVLESIIARINRYMDNT 877

 Score = 75 (31.5 bits), Expect = 1.9e-184, Sum P(8) = 1.9e-184
 Identities = 16/28 (57%), Positives = 22/28 (78%)

Query:   815 DEIHLLHDERGPVLEALIARTIRNIEAT 842
             DEIHLL++ RG VLE++IAR  R ++ T
Sbjct:   850 DEIHLLNEMRGNVLESIIARINRYMDNT 877

 Score = 63 (27.2 bits), Expect = 5.9e-197, Sum P(9) = 5.9e-197
 Identities = 16/48 (33%), Positives = 24/48 (50%)

Query:   410 LDLEDLQFSS-GSHFMSNKRCELPDGSFRKQRKGYEEVHVPALKPKPM 456
             +DLE L+          NK   LP  S R +RK Y+E+ + ++K   M
Sbjct:   624 IDLEKLETKEKNKDIFFNKEVILPPESKRIERKEYDEIIISSMKDNKM 671

 Score = 53 (23.7 bits), Expect = 4.1e-183, Sum P(9) = 4.1e-183
 Identities = 9/23 (39%), Positives = 16/23 (69%)

Query:   369 GKNEDGDANDSADARQSTSIRHQ 391
             G+NEDGD N++ +   + S+R +
Sbjct:   292 GENEDGDDNNNNNNNNNNSVRRK 314

 Score = 53 (23.7 bits), Expect = 9.1e-116, Sum P(9) = 9.1e-116
 Identities = 13/66 (19%), Positives = 34/66 (51%)

Query:  1463 VDSEAIRLIQACVDV-LSSNGWLSPAVAAMEVAQMITQAMWSKDSYLKQLPHFNADIIKR 1521
             +   A+R+ ++  ++ L  N + +     ++  +MI + MWS  + L+Q    + ++I+ 
Sbjct:  1482 IHQNALRIFRSFFEISLKKNSY-NLIKLTLKFCKMIERRMWSTMTPLRQFGLLSTELIRI 1540

Query:  1522 CTEKGV 1527
               +K +
Sbjct:  1541 IEKKNI 1546

 Score = 41 (19.5 bits), Expect = 2.0e-124, Sum P(10) = 2.0e-124
 Identities = 7/22 (31%), Positives = 14/22 (63%)

Query:   791 DEFKIIYVAPMRSLVQEMVGNF 812
             D  KI+Y+AP+  ++ +   N+
Sbjct:  1831 DLIKIVYIAPLDDVIIKTFKNW 1852

 Score = 41 (19.5 bits), Expect = 7.5e-76, Sum P(6) = 7.5e-76
 Identities = 7/22 (31%), Positives = 14/22 (63%)

Query:   535 DEFKIIYVAPMRSLVQEMVGNF 556
             D  KI+Y+AP+  ++ +   N+
Sbjct:  1831 DLIKIVYIAPLDDVIIKTFKNW 1852

 Score = 40 (19.1 bits), Expect = 7.8e-165, Sum P(7) = 7.8e-165
 Identities = 12/45 (26%), Positives = 22/45 (48%)

Query:    16 NSNLVLQADVRLIERRSRDEATGEVCSLVGKLEGTRMGDRFMRTK 60
             N  ++L  + + IER+  DE       ++  ++  +M D   RTK
Sbjct:   641 NKEVILPPESKRIERKEYDEI------IISSMKDNKM-DGMKRTK 678

 Score = 39 (18.8 bits), Expect = 1.0e-103, Sum P(6) = 1.0e-103
 Identities = 7/20 (35%), Positives = 13/20 (65%)

Query:  1097 DTKGEGVLITNHSELQYYLS 1116
             D K +G+  T ++++ YY S
Sbjct:   668 DNKMDGMKRTKNNKMNYYTS 687

 Score = 37 (18.1 bits), Expect = 4.6e-166, Sum P(9) = 4.6e-166
 Identities = 8/26 (30%), Positives = 13/26 (50%)

Query:  1612 WWVVIGDPKTNSLLSIKRLTLQQKAK 1637
             +WV + D    S+L     TL++  K
Sbjct:  1619 FWVFVFDISNESILHYDLFTLKKNYK 1644

 Score = 37 (18.1 bits), Expect = 1.4e-96, Sum P(8) = 1.4e-96
 Identities = 6/16 (37%), Positives = 10/16 (62%)

Query:   712 LLKSRYATDDHVVKFF 727
             ++ S Y  D H++ FF
Sbjct:  2508 IISSFYNLDYHIIHFF 2523


>UNIPROTKB|Q8IFP1 [details] [associations]
            symbol:PFD1060w "U5 small nuclear
            ribonucleoprotein-specific protein, putative" species:36329
            "Plasmodium falciparum 3D7" [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISS] [GO:0005681 "spliceosomal complex"
            evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00382 SMART:SM00490 GO:GO:0005524 GO:GO:0005681
            GO:GO:0003676 EMBL:AL844503 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889 SMART:SM00611
            SMART:SM00973 HOGENOM:HOG000157749 GO:GO:0004004 KO:K01509
            RefSeq:XP_001351528.1 ProteinModelPortal:Q8IFP1 IntAct:Q8IFP1
            MINT:MINT-1569750 PRIDE:Q8IFP1 EnsemblProtists:PFD1060w:mRNA
            GeneID:812456 KEGG:pfa:PFD1060w EuPathDB:PlasmoDB:PF3D7_0422500
            ProtClustDB:CLSZ2515128 Uniprot:Q8IFP1
        Length = 2874

 Score = 609 (219.4 bits), Expect = 1.9e-184, Sum P(8) = 1.9e-184
 Identities = 110/190 (57%), Positives = 150/190 (78%)

Query:   838 NIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLFYFDNSFRPVALEQQYIGVTEKKA 897
             +I   ++ +RLVGLSATLPNY+DV   LR   E G+FYFD+SFRPV +EQ YIG+ EKK 
Sbjct:   959 HISIRRKKIRLVGLSATLPNYEDVGIFLRAHIERGIFYFDHSFRPVQIEQHYIGIKEKKG 1018

Query:   898 LKRFQVMNDIVYEKVMEHAGRNQLLVFVHSRKETGKTARAIRDMCLEKDTLGQFLREGSA 957
             +K++ +MN++ YEKV+E AG+NQ+L+FVHSRKET +T++ + D  ++ D L +FL +   
Sbjct:  1019 IKKYALMNELTYEKVLEEAGKNQILIFVHSRKETYRTSKLLIDRFMKSDNLSKFLIDKKI 1078

Query:   958 SMEVLRTEADQVKNGELRDLLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAW 1017
             S E+L +E + V N EL+++LP+GF IHHAG+ R+DR LVEDLF+DRHIQVLV T+TLAW
Sbjct:  1079 SSEILLSEKEHVINEELKEILPFGFGIHHAGLKRLDRKLVEDLFSDRHIQVLVCTSTLAW 1138

Query:  1018 GVNLPAHTVV 1027
             G+NLPAHTV+
Sbjct:  1139 GINLPAHTVI 1148

 Score = 536 (193.7 bits), Expect = 5.9e-197, Sum P(9) = 5.9e-197
 Identities = 104/279 (37%), Positives = 167/279 (59%)

Query:  1190 DLIHTAALHLERSGLIKYDRKSGHMQVTELGRIASHYYCTHETMATYNQLLKPTLSEIEL 1249
             +++++  L LE+  LIKY++K   +  T +G+I+S+YY  ++++  YN+ L    +EI+L
Sbjct:  1353 NILYSCFLILEKYDLIKYNKKLNTVSSTYIGKISSYYYVDYKSIDIYNKKLNKYTNEIDL 1412

Query:  1250 FRVFSLSGEFRHITVRXXXXXXXXXXXXRAPIPIKESTDEPSAKVNILLQAYISQLKLEG 1309
              ++F++S EF++I +R            + PIP+KES + P  K+NILLQ Y+S + L G
Sbjct:  1413 LKIFTMSNEFKNIFIRDEEKTELSIIMEKLPIPVKESINIPYTKINILLQLYLSNIILNG 1472

Query:  1310 FALMSDMVFVTQSAARLMRAIFEIVLYRGWAQLADKALSLCKMVDRRMWQSMSPLRQFRX 1369
             + + +DMV++ Q+A R+ R+ FEI L +    L    L  CKM++RRMW +M+PLRQF  
Sbjct:  1473 YIINADMVYIHQNALRIFRSFFEISLKKNSYNLIKLTLKFCKMIERRMWSTMTPLRQFGL 1532

Query:  1370 XXXXXXXXXXXXNFPWERLYDLGPNEIGELIRVPKLGKTIHKYVHQFPKLELATHIQPIT 1429
                         N  ++    +  NE   + +  K+ K I+K VH FPKLEL  +IQPI 
Sbjct:  1533 LSTELIRIIEKKNITFKNYLTMNLNEYITIFKNKKIAKNIYKLVHHFPKLELNAYIQPIN 1592

Query:  1430 RSTLRVELTISPDFQWDEKLHGGSEGFWILVEDVDSEAI 1468
                L+V+L I+PDF ++ K HG    FW+ V D+ +E+I
Sbjct:  1593 HKILKVDLNIAPDFIYNPKYHGYFMLFWVFVFDISNESI 1631

 Score = 501 (181.4 bits), Expect = 5.9e-197, Sum P(9) = 5.9e-197
 Identities = 98/195 (50%), Positives = 141/195 (72%)

Query:   992 VDRTLVED-LFADR-HI--QVLVSTATLAWGVNLPAHTVVDRTLVEDLFADRHIQVLVST 1047
             +D+ +  + L +++ H+  + L       +G++      +DR LVEDLF+DRHIQVLV T
Sbjct:  1074 IDKKISSEILLSEKEHVINEELKEILPFGFGIHHAGLKRLDRKLVEDLFSDRHIQVLVCT 1133

Query:  1048 ATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQMLGRAGRPQYDTKGEGVLITN 1107
             +TLAWG+NLPAHTVIIKGT +YN   G + EL ++DVLQM+GR+GRPQYD  G+ ++IT+
Sbjct:  1134 STLAWGINLPAHTVIIKGTSVYNINIGDFDELSSMDVLQMVGRSGRPQYDKSGKAIIITD 1193

Query:  1108 HSELQYYLSLLNHQLPVESQMISKLPDMLNAEIVLGTVQNLKDAVTWLGYTYLYIRMLRA 1167
             H  LQ YLSL N QL +ES ++  + +++NAEIVL  +QN+ DA+ WL +TY+YIRML+ 
Sbjct:  1194 HKNLQLYLSLNNEQLFIESTLLHNIVNIINAEIVLKNIQNMDDAMNWLEHTYMYIRMLKC 1253

Query:  1168 PNLYGI---SHDALK 1179
             P+LYG+   S+D +K
Sbjct:  1254 PSLYGVIINSNDKIK 1268

 Score = 334 (122.6 bits), Expect = 5.9e-197, Sum P(9) = 5.9e-197
 Identities = 77/217 (35%), Positives = 123/217 (56%)

Query:  1466 EAIRLIQACVDVLSSNGWLSPAVAAMEVAQMITQAMWSKD-SYLKQLPHFNADIIKRCTE 1524
             +A +LI + +DV+SSN  L+  +  MEV+QM+TQ+M S D S L QLPHF+  +IK+  +
Sbjct:  2658 KAYKLINSLIDVISSNNILNFCLFVMEVSQMLTQSMKSTDQSNLYQLPHFDEHLIKKAND 2717

Query:  1525 KGVETVFDIMXXXXX-XXXXXXXXXXXXXADVARFCNRYPNIELSYEV-LNKD-RIXXXX 1581
               +  V+D++                   +++A  CN +P IE+ YE+ L+K  ++    
Sbjct:  2718 LEILDVYDLINAEDEPRDILLKHLNEKQRSEIANVCNIFPIIEVQYEIDLDKSYKVNEIA 2777

Query:  1582 XXXXXXXLDREDEVTGPVIAPFYPQKREEGWWVVIGDPKTNSLLSIKRLTLQQKAK-IKL 1640
                     D  D+      + + P ++EE WW+VIG  K N LLSIK+L+L +    IK+
Sbjct:  2778 QLNLTIERDLTDDAVIFAHSLYLPFEKEEMWWIVIGIKKMNLLLSIKKLSLLKSVNNIKI 2837

Query:  1641 DFVAPN-PGHHSYALYFMSDAYLGCDQEYKFSIDVSE 1676
             +F  P+ P  +   +Y ++D Y+GCDQEY+F I+V E
Sbjct:  2838 NFELPDKPNTYDVVIYVINDCYVGCDQEYEFKINVEE 2874

 Score = 280 (103.6 bits), Expect = 5.9e-197, Sum P(9) = 5.9e-197
 Identities = 55/126 (43%), Positives = 84/126 (66%)

Query:   582 NIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLFYFDNSFRPVALEQQYIGVTEKKA 641
             +I   ++ +RLVGLSATLPNY+DV   LR   E G+FYFD+SFRPV +EQ YIG+ EKK 
Sbjct:   959 HISIRRKKIRLVGLSATLPNYEDVGIFLRAHIERGIFYFDHSFRPVQIEQHYIGIKEKKG 1018

Query:   642 LKRFQVMNDIVYEKVMEHAGRNQLLVST-LRVELTISPDFQWDEKLHGGSEGFWILVEDV 700
             +K++ +MN++ YEKV+E AG+NQ+L+    R E   +     D  +   +   +++ + +
Sbjct:  1019 IKKYALMNELTYEKVLEEAGKNQILIFVHSRKETYRTSKLLIDRFMKSDNLSKFLIDKKI 1078

Query:   701 DSEVVL 706
              SE++L
Sbjct:  1079 SSEILL 1084

 Score = 275 (101.9 bits), Expect = 2.9e-157, Sum P(8) = 2.9e-157
 Identities = 68/240 (28%), Positives = 126/240 (52%)

Query:  1025 TVVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDV 1084
             T +++ +VE LF  + IQ+L+ +    + +N+ A+ VII  T I +    +  +    ++
Sbjct:  2315 TEIEKKIVEILFDKKTIQILIVSYDYIYSLNVYANNVIILDTIITHFHNNKEEDYSIQNI 2374

Query:  1085 LQMLGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMISKLPDMLNAEIVLGT 1144
             L+M+  AGR   DTK    + T  ++ +YY + +   L VES +   LP+ LN EIV+ T
Sbjct:  2375 LEMISYAGRQNEDTKAFVYIYTYITKKEYYKNFIYEPLTVESNIEDNLPNFLNNEIVMST 2434

Query:  1145 VQNLKDAVTWLGYTYLYIRMLRAPNLYGISHDALKEDPLLECHRADLIHTAALHLERSGL 1204
             ++N +DA+ WL +++ Y R+ + PN YG+    +  + + + + ++LI      L  +  
Sbjct:  2435 IENYQDAIDWLTWSFFYRRIKKNPNYYGLK--GISNEHISD-YLSELIENNMEILSFANC 2491

Query:  1205 IKYDRKSGHMQVTELGRIASHYYCTHETMATYNQ--LLKPTLSEIELFRVFSLSGEFRHI 1262
             I  + ++  ++   LG I+S Y   +  +  +NQ  L   TL +  +F +  LS  F  I
Sbjct:  2492 INIEEQTMDIKPCNLGIISSFYNLDYHIIHFFNQYVLSLKTLKKSRIFEIICLSNIFNDI 2551

 Score = 220 (82.5 bits), Expect = 5.9e-197, Sum P(9) = 5.9e-197
 Identities = 45/103 (43%), Positives = 67/103 (65%)

Query:   458 PDET-LVPIDKLPRYVQHAFE--DFKTLNRIQSRLCKSALES-DENLLLCAPTGAGKTNV 513
             P+E  L+ I++LP +    F   +   LN IQS++   A    +EN+L+CAPTG+GKTN+
Sbjct:   688 PEEIKLIHINELPEWTHEVFSCVNITKLNPIQSKVYDVAFNKYEENMLICAPTGSGKTNI 747

Query:   514 ALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNF 556
             ALLC+L  I  +    G IN  +FKI+Y++PM++LV E V +F
Sbjct:   748 ALLCILNVINSYRLTSGNINRKDFKIVYISPMKALVNEQVQSF 790

 Score = 193 (73.0 bits), Expect = 5.9e-197, Sum P(9) = 5.9e-197
 Identities = 65/223 (29%), Positives = 115/223 (51%)

Query:     1 MADAAARQLQYEYKANSNLVLQADVRLIERRSRDEATGEVCSLVGKLEGTRMGDRFMRTK 60
             MA+   +  ++EY+ NSNLVLQ +  +   +   E TGE  SLVG+L+  +MGD+   + 
Sbjct:     1 MAEEYEKFKRFEYRMNSNLVLQREGPISNTK---EPTGESESLVGRLK-YKMGDKVEYSN 56

Query:    61 PIKA--------EERKVKRQKR----DEAQYDFT-----RMKGATLLSEGVDEMVGIIYR 103
               K         +E  + R KR    D+ +Y+       R K  ++L+  ++++   +Y+
Sbjct:    57 KNKKNIMLVQDNKEMAINRNKRKDIFDDDKYNRRSNKKIRHKEKSVLNVNIEDI--FLYK 114

Query:   104 PKTQETRQTYEVLLSFIQEALGDQPRDILCGAADEVLTVLKNDRMXXXXXXXXTENLLGS 163
             P T+ T + Y  L+S I+  LGD   DI+  A +E+L +LKN+ +         E+ L  
Sbjct:   115 PTTKYTEEIYTKLMSKIRFLLGDNTGDIINSACNEILYILKNEELNNEEKKKQVESELEI 174

Query:   164 -LAEERFALLVNLGKKITDFGAEQKSTTAEENIDDTYGINVQF 205
              + ++ F  + NL K+I DF  +++     E +++  G+ V F
Sbjct:   175 YINDDIFIEINNLSKEIYDFNKQEEG----EYVENDEGVAVIF 213

 Score = 186 (70.5 bits), Expect = 5.9e-197, Sum P(9) = 5.9e-197
 Identities = 44/123 (35%), Positives = 72/123 (58%)

Query:   249 DAEGTGRKKDKSLHPLDIDAYWLQRRLSKIYDDAMVSQAKAGEVLNILKSAGDDRDAENQ 308
             D E    + +  L+   ID++WLQR L+KI+ D  +   K  EVLN+L +  D +++EN+
Sbjct:   351 DEENKNVQDNDELNINVIDSHWLQRELNKIFPDPSLCLDKEKEVLNVL-NIYDIQESENK 409

Query:   309 LVLLLGYDCFDFIKMLKKYRQMILYCTLLASSQSESERQKLRDTMSEDPALAKILRQLDT 368
             L+ +L Y+ F   ++L K R  I YCTLL  +Q+E E+++++  M +      IL +L  
Sbjct:   410 LMHILKYENFHIARVLIKNRWKIYYCTLLGQAQTEEEKEEIKKEMKKTEEGQDILDELCN 469

Query:   369 GKN 371
              KN
Sbjct:   470 FKN 472

 Score = 144 (55.7 bits), Expect = 1.6e-176, Sum P(8) = 1.6e-176
 Identities = 26/52 (50%), Positives = 37/52 (71%)

Query:   761 PRGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNF 812
             P G+GKTN+ALLC+L  I  +    G IN  +FKI+Y++PM++LV E V +F
Sbjct:   739 PTGSGKTNIALLCILNVINSYRLTSGNINRKDFKIVYISPMKALVNEQVQSF 790

 Score = 124 (48.7 bits), Expect = 2.2e-108, Sum P(10) = 2.2e-108
 Identities = 22/51 (43%), Positives = 33/51 (64%)

Query:   670 LRVELTISPDFQWDEKLHGGSEGFWILVEDVDSEVVLHHEYFLLKSRYATD 720
             L+V+L I+PDF ++ K HG    FW+ V D+ +E +LH++ F LK  Y  D
Sbjct:  1596 LKVDLNIAPDFIYNPKYHGYFMLFWVFVFDISNESILHYDLFTLKKNYKND 1646

 Score = 84 (34.6 bits), Expect = 8.6e-105, Sum P(10) = 8.6e-105
 Identities = 17/61 (27%), Positives = 33/61 (54%)

Query:   967 DQVKNGELRDLLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTV 1026
             D + +  LR  +  G    H  MT +++ +VE LF  + IQ+L+ +    + +N+ A+ V
Sbjct:  2292 DYINDKMLRQFMKKGICYLHNNMTEIEKKIVEILFDKKTIQILIVSYDYIYSLNVYANNV 2351

Query:  1027 V 1027
             +
Sbjct:  2352 I 2352

 Score = 82 (33.9 bits), Expect = 2.0e-124, Sum P(10) = 2.0e-124
 Identities = 13/35 (37%), Positives = 24/35 (68%)

Query:   720 DDHVVKFFVPVFEPLPPQYFLRIVSDRWIGAETIL 754
             DDHV+ FF+P+ +   P Y ++++SD+W+  E  +
Sbjct:  1671 DDHVLTFFLPINDN--PFYIVKVISDKWLECEATI 1703

 Score = 75 (31.5 bits), Expect = 5.9e-197, Sum P(9) = 5.9e-197
 Identities = 16/28 (57%), Positives = 22/28 (78%)

Query:   559 DEIHLLHDERGPVLEALIARTIRNIEAT 586
             DEIHLL++ RG VLE++IAR  R ++ T
Sbjct:   850 DEIHLLNEMRGNVLESIIARINRYMDNT 877

 Score = 75 (31.5 bits), Expect = 1.9e-184, Sum P(8) = 1.9e-184
 Identities = 16/28 (57%), Positives = 22/28 (78%)

Query:   815 DEIHLLHDERGPVLEALIARTIRNIEAT 842
             DEIHLL++ RG VLE++IAR  R ++ T
Sbjct:   850 DEIHLLNEMRGNVLESIIARINRYMDNT 877

 Score = 63 (27.2 bits), Expect = 5.9e-197, Sum P(9) = 5.9e-197
 Identities = 16/48 (33%), Positives = 24/48 (50%)

Query:   410 LDLEDLQFSS-GSHFMSNKRCELPDGSFRKQRKGYEEVHVPALKPKPM 456
             +DLE L+          NK   LP  S R +RK Y+E+ + ++K   M
Sbjct:   624 IDLEKLETKEKNKDIFFNKEVILPPESKRIERKEYDEIIISSMKDNKM 671

 Score = 53 (23.7 bits), Expect = 4.1e-183, Sum P(9) = 4.1e-183
 Identities = 9/23 (39%), Positives = 16/23 (69%)

Query:   369 GKNEDGDANDSADARQSTSIRHQ 391
             G+NEDGD N++ +   + S+R +
Sbjct:   292 GENEDGDDNNNNNNNNNNSVRRK 314

 Score = 53 (23.7 bits), Expect = 9.1e-116, Sum P(9) = 9.1e-116
 Identities = 13/66 (19%), Positives = 34/66 (51%)

Query:  1463 VDSEAIRLIQACVDV-LSSNGWLSPAVAAMEVAQMITQAMWSKDSYLKQLPHFNADIIKR 1521
             +   A+R+ ++  ++ L  N + +     ++  +MI + MWS  + L+Q    + ++I+ 
Sbjct:  1482 IHQNALRIFRSFFEISLKKNSY-NLIKLTLKFCKMIERRMWSTMTPLRQFGLLSTELIRI 1540

Query:  1522 CTEKGV 1527
               +K +
Sbjct:  1541 IEKKNI 1546

 Score = 41 (19.5 bits), Expect = 2.0e-124, Sum P(10) = 2.0e-124
 Identities = 7/22 (31%), Positives = 14/22 (63%)

Query:   791 DEFKIIYVAPMRSLVQEMVGNF 812
             D  KI+Y+AP+  ++ +   N+
Sbjct:  1831 DLIKIVYIAPLDDVIIKTFKNW 1852

 Score = 41 (19.5 bits), Expect = 7.5e-76, Sum P(6) = 7.5e-76
 Identities = 7/22 (31%), Positives = 14/22 (63%)

Query:   535 DEFKIIYVAPMRSLVQEMVGNF 556
             D  KI+Y+AP+  ++ +   N+
Sbjct:  1831 DLIKIVYIAPLDDVIIKTFKNW 1852

 Score = 40 (19.1 bits), Expect = 7.8e-165, Sum P(7) = 7.8e-165
 Identities = 12/45 (26%), Positives = 22/45 (48%)

Query:    16 NSNLVLQADVRLIERRSRDEATGEVCSLVGKLEGTRMGDRFMRTK 60
             N  ++L  + + IER+  DE       ++  ++  +M D   RTK
Sbjct:   641 NKEVILPPESKRIERKEYDEI------IISSMKDNKM-DGMKRTK 678

 Score = 39 (18.8 bits), Expect = 1.0e-103, Sum P(6) = 1.0e-103
 Identities = 7/20 (35%), Positives = 13/20 (65%)

Query:  1097 DTKGEGVLITNHSELQYYLS 1116
             D K +G+  T ++++ YY S
Sbjct:   668 DNKMDGMKRTKNNKMNYYTS 687

 Score = 37 (18.1 bits), Expect = 4.6e-166, Sum P(9) = 4.6e-166
 Identities = 8/26 (30%), Positives = 13/26 (50%)

Query:  1612 WWVVIGDPKTNSLLSIKRLTLQQKAK 1637
             +WV + D    S+L     TL++  K
Sbjct:  1619 FWVFVFDISNESILHYDLFTLKKNYK 1644

 Score = 37 (18.1 bits), Expect = 1.4e-96, Sum P(8) = 1.4e-96
 Identities = 6/16 (37%), Positives = 10/16 (62%)

Query:   712 LLKSRYATDDHVVKFF 727
             ++ S Y  D H++ FF
Sbjct:  2508 IISSFYNLDYHIIHFF 2523


>UNIPROTKB|Q8N3C0 [details] [associations]
            symbol:ASCC3 "Activating signal cointegrator 1 complex
            subunit 3" species:9606 "Homo sapiens" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0043140
            "ATP-dependent 3'-5' DNA helicase activity" evidence=IDA]
            [GO:0005634 "nucleus" evidence=TAS] [GO:0006307 "DNA dealkylation
            involved in DNA repair" evidence=IDA] [GO:0032508 "DNA duplex
            unwinding" evidence=IDA] [GO:0008283 "cell proliferation"
            evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005622 "intracellular" evidence=IDA] InterPro:IPR001650
            InterPro:IPR003593 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00382 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0006307
            GO:GO:0008283 EMBL:CH471051 GO:GO:0006351 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 CTD:10973
            KO:K01529 OMA:FPGKHYC GO:GO:0043140 InterPro:IPR004179 Pfam:PF02889
            SMART:SM00611 SMART:SM00973 EMBL:AL834463 EMBL:AK315197
            EMBL:AL591585 EMBL:AL121965 EMBL:AL133338 EMBL:AL356122 EMBL:Z86062
            EMBL:BC050681 EMBL:BC125211 EMBL:BC125212 EMBL:BC026066
            EMBL:AY013288 EMBL:AJ223948 IPI:IPI00430472 RefSeq:NP_006819.2
            RefSeq:NP_071374.1 UniGene:Hs.486031 ProteinModelPortal:Q8N3C0
            SMR:Q8N3C0 IntAct:Q8N3C0 MINT:MINT-1183138 STRING:Q8N3C0
            PhosphoSite:Q8N3C0 DMDM:158518649 PaxDb:Q8N3C0 PRIDE:Q8N3C0
            DNASU:10973 Ensembl:ENST00000369143 Ensembl:ENST00000369162
            Ensembl:ENST00000522650 GeneID:10973 KEGG:hsa:10973 UCSC:uc003pqk.3
            GeneCards:GC06M100956 H-InvDB:HIX0021958 HGNC:HGNC:18697
            HPA:HPA031608 HPA:HPA031609 HPA:HPA031610 MIM:614217
            neXtProt:NX_Q8N3C0 PharmGKB:PA134890913 eggNOG:COG1204
            HOGENOM:HOG000152625 HOVERGEN:HBG051896 InParanoid:Q8N3C0
            PhylomeDB:Q8N3C0 ChiTaRS:ASCC3 GenomeRNAi:10973 NextBio:41694
            ArrayExpress:Q8N3C0 Bgee:Q8N3C0 CleanEx:HS_ASCC3
            Genevestigator:Q8N3C0 GermOnline:ENSG00000112249 Uniprot:Q8N3C0
        Length = 2202

 Score = 986 (352.1 bits), Expect = 6.6e-191, Sum P(5) = 6.6e-191
 Identities = 194/443 (43%), Positives = 282/443 (63%)

Query:  1028 DRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQM 1087
             DR LVE+LF++ HI+VLV TATLAWGVNLPAH VIIKGTQIY  ++G +V+LG LDV+Q+
Sbjct:   790 DRNLVENLFSNGHIKVLVCTATLAWGVNLPAHAVIIKGTQIYAAKRGSFVDLGILDVMQI 849

Query:  1088 LGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMISKLPDMLNAEIVLGTVQN 1147
              GRAGRPQ+D  GEG++IT H +L +YL+LL  + P+ESQ +  L D LNAEI LGTV N
Sbjct:   850 FGRAGRPQFDKFGEGIIITTHDKLSHYLTLLTQRNPIESQFLESLADNLNAEIALGTVTN 909

Query:  1148 LKDAVTWLGYTYLYIRMLRAPNLYGISHDALKEDPLLECHRADLIHTAALHLERSGLIKY 1207
             +++AV W+ YTYLY+RM   P  YGISH A + DP L  HR  L+      L+++ +I++
Sbjct:   910 VEEAVKWISYTYLYVRMRANPLAYGISHKAYQIDPTLRKHREQLVIEVGRKLDKAQMIRF 969

Query:  1208 DRKSGHMQVTELGRIASHYYCTHETMATYNQLLKPTLSEIELFRVFSLSGEFRHITVRXX 1267
             + ++G+   T+LGR ASHYY  + T+ T+N+L     +E ++F + S + EF  I VR  
Sbjct:   970 EERTGYFSSTDLGRTASHYYIKYNTIETFNELFDAHKTEGDIFAIVSKAEEFDQIKVREE 1029

Query:  1268 XXXXXXXXXXR-APIPIKESTDEPSAKVNILLQAYISQLKLEGFALMSDMVFVTQSAARL 1326
                           +      +    K+NILLQ YIS+ +++ F+L+SD  +V Q+AAR+
Sbjct:  1030 EIEELDTLLSNFCELSTPGGVENSYGKINILLQTYISRGEMDSFSLISDSAYVAQNAARI 1089

Query:  1327 MRAIFEIVLYRGWAQLADKALSLCKMVDRRMWQSMSPLRQFRXXXXXXXXXXXXXNFPWE 1386
             +RA+FEI L + W  +  + L+L K++D+R+W   SPLRQF                  +
Sbjct:  1090 VRALFEIALRKRWPTMTYRLLNLSKVIDKRLWGWASPLRQFSILPPHILTRLEEKKLTVD 1149

Query:  1387 RLYDLGPNEIGELIRVPKLGKTIHKYVHQFPKLELATHIQPITRSTLRVELTISPDFQWD 1446
             +L D+  +EIG ++    +G  + + VHQ P + +   IQPITR+ LRV L+I  DF W+
Sbjct:  1150 KLKDMRKDEIGHILHHVNIGLKVKQCVHQIPSVMMEASIQPITRTVLRVTLSIYADFTWN 1209

Query:  1447 EKLHGG-SEGFWILVEDVDSEAI 1468
             +++HG   E +WI VED  ++ I
Sbjct:  1210 DQVHGTVGEPWWIWVEDPTNDHI 1232

 Score = 532 (192.3 bits), Expect = 6.6e-191, Sum P(5) = 6.6e-191
 Identities = 102/215 (47%), Positives = 149/215 (69%)

Query:   815 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 874
             DE+HLLH++RGPVLE+++ART+R +E+TQ  +R++GLSATLPNY DVAT L + P  GLF
Sbjct:   611 DEVHLLHEDRGPVLESIVARTLRQVESTQSMIRILGLSATLPNYLDVATFLHVNPYIGLF 670

Query:   875 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEH--AGRNQLLVFVHSRKETG 932
             +FD  FRPV L Q ++G+     +++   M+++ YE V++   AG +Q++VFVH+R  T 
Sbjct:   671 FFDGRFRPVPLGQTFLGIKCANKMQQLNNMDEVCYENVLKQVKAG-HQVMVFVHARNATV 729

Query:   933 KTARAIRDMCLEKDTLGQFLREGSASMEVLRTEADQVKNGELRDLLPYGFAIHHAGMTRV 992
             +TA ++ +       +  F         +   +  + +N ++R+L P GF+IHHAGM R 
Sbjct:   730 RTAMSLIERAKNCGHIPFFFPTQGHDYVLAEKQVQRSRNKQVRELFPDGFSIHHAGMLRQ 789

Query:   993 DRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
             DR LVE+LF++ HI+VLV TATLAWGVNLPAH V+
Sbjct:   790 DRNLVENLFSNGHIKVLVCTATLAWGVNLPAHAVI 824

 Score = 529 (191.3 bits), Expect = 7.4e-145, Sum P(6) = 7.4e-145
 Identities = 126/358 (35%), Positives = 196/358 (54%)

Query:  1014 TLAWGVNLPAHTVV---DRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYN 1070
             TLA+G+ +  H  +   DR  VE+LF +  +QVL++T+TLAWGVN PAH VIIKGT+ Y+
Sbjct:  1611 TLAFGIGMH-HAGLHERDRKTVEELFVNCKVQVLIATSTLAWGVNFPAHLVIIKGTEYYD 1669

Query:  1071 PEKGRWVELGALDVLQMLGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMIS 1130
              +  R+V+    DVLQM+GRAGRPQ+D +G+ V++ +  +  +Y   L    PVES ++ 
Sbjct:  1670 GKTRRYVDFPITDVLQMMGRAGRPQFDDQGKAVILVHDIKKDFYKKFLYEPFPVESSLLG 1729

Query:  1131 KLPDMLNAEIVLGTVQNLKDAVTWLGYTYLYIRMLRAPNLYG---ISHDALKEDPLLECH 1187
              L D LNAEI  GT+ + +DA+ ++ +TY + R++  P+ Y    +SHD++ +   L  H
Sbjct:  1730 VLSDHLNAEIAGGTITSKQDALDYITWTYFFRRLIMNPSYYNLGDVSHDSVNK--FLS-H 1786

Query:  1188 RADLIHTAALHLERSGLIKYDRKSGHMQVTELGRIASHYYCTHETMATYNQLLKPTLSEI 1247
                LI  + + LE S  I+    +  ++    GRIAS+YY  H+T+  +   LKP  S  
Sbjct:  1787 ---LIEKSLIELELSYCIEIGEDNRSIEPLTYGRIASYYYLKHQTVKMFKDRLKPECSTE 1843

Query:  1248 ELFRVFSLSGEFRHITVRXXXXXXXXXXXXRAPIPIK-ESTDEPSAKVNILLQAYISQLK 1306
             EL  + S + E+  + VR              PI     S D P  K ++LLQA++S+  
Sbjct:  1844 ELLSILSDAEEYTDLPVRHNEDHMNSELAKCLPIESNPHSFDSPHTKAHLLLQAHLSRAM 1903

Query:  1307 LEGFALMSDMVFVTQSAARLMRAIFEIVLYRGWAQLADKALSLCKMVDRRMWQSMSPL 1364
             L      +D   V   A R+ +A+ ++   +GW        +L +MV +  W   S L
Sbjct:  1904 LPCPDYDTDTKTVLDQALRVCQAMLDVAANQGWLVTVLNITNLIQMVIQGRWLKDSSL 1961

 Score = 377 (137.8 bits), Expect = 7.4e-145, Sum P(6) = 7.4e-145
 Identities = 89/215 (41%), Positives = 126/215 (58%)

Query:   815 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 874
             DEIHLL +ERGPVLE +++RT      T++ VR+VGLS  L N +D+A  L IK + GLF
Sbjct:  1453 DEIHLLGEERGPVLEVIVSRTNFISSHTEKPVRIVGLSTALANARDLADWLNIK-QMGLF 1511

Query:   875 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQLLVFVHSRKETGKT 934
              F  S RPV LE    G   +    R   MN   ++ +  H+    +L+FV SR++T  T
Sbjct:  1512 NFRPSVRPVPLEVHIQGFPGQHYCPRMASMNKPAFQAIRSHSPAKPVLIFVSSRRQTRLT 1571

Query:   935 A-RAIRDMCLEKDTLGQFLREGSASME-VLRTEADQVKNGELRDLLPYGFAIHHAGMTRV 992
             A   I  +  E+D   Q+L      ME ++ T    V++  L+  L +G  +HHAG+   
Sbjct:  1572 ALELIAFLATEEDPK-QWLNMDEREMENIIAT----VRDSNLKLTLAFGIGMHHAGLHER 1626

Query:   993 DRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
             DR  VE+LF +  +QVL++T+TLAWGVN PAH V+
Sbjct:  1627 DRKTVEELFVNCKVQVLIATSTLAWGVNFPAHLVI 1661

 Score = 310 (114.2 bits), Expect = 6.6e-191, Sum P(5) = 6.6e-191
 Identities = 80/229 (34%), Positives = 121/229 (52%)

Query:   341 QSESERQKLRDTMSEDPALAKILRQLDTGKNEDGDANDSADARQSTSIRHQMXXXXXXXX 400
             QSE E+Q ++    E+  +A+  R+   G  ED + ++         +R Q         
Sbjct:   329 QSEQEKQLMKQYRREEKRIAR--REKKAG--EDLEVSEGLMCFDPKELRIQREQALLNAR 384

Query:   401 XXXXXTRQV-LDLEDLQFS----------SGSHFMSNKRCELPDGSFRKQRKGYEEVHVP 449
                  +RQ   D+E + +             S F++  +  LP+G  R+  K YEEV +P
Sbjct:   385 SVPILSRQRDADVEKIHYPHVYDSQAEAMKTSAFIAGAKMILPEGIQRENNKLYEEVRIP 444

Query:   450 ALKPKPMGPDETLVPIDKLPRYVQHAFEDFKTLNRIQSRLCKSALESDENLLLCAPTGAG 509
               +P P+  +E  V I  L    Q AF+  K LNRIQS + ++A  ++EN+L+CAPTGAG
Sbjct:   445 YSEPMPLSFEEKPVYIQDLDEIGQLAFKGMKRLNRIQSIVFETAYNTNENMLICAPTGAG 504

Query:   510 KTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNFGK 558
             KTN+A+L +L EI +H    G I  +EFKI+YVAPM++L  EM   F +
Sbjct:   505 KTNIAMLTVLHEIRQHFQ-QGVIKKNEFKIVYVAPMKALAAEMTDYFSR 552

 Score = 299 (110.3 bits), Expect = 1.9e-166, Sum P(5) = 1.9e-166
 Identities = 55/111 (49%), Positives = 83/111 (74%)

Query:   559 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 618
             DE+HLLH++RGPVLE+++ART+R +E+TQ  +R++GLSATLPNY DVAT L + P  GLF
Sbjct:   611 DEVHLLHEDRGPVLESIVARTLRQVESTQSMIRILGLSATLPNYLDVATFLHVNPYIGLF 670

Query:   619 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEH--AGRNQLLV 667
             +FD  FRPV L Q ++G+     +++   M+++ YE V++   AG +Q++V
Sbjct:   671 FFDGRFRPVPLGQTFLGIKCANKMQQLNNMDEVCYENVLKQVKAG-HQVMV 720

 Score = 230 (86.0 bits), Expect = 1.2e-137, Sum P(6) = 1.2e-137
 Identities = 49/121 (40%), Positives = 76/121 (62%)

Query:   642 LKRFQVMNDIVYEKVMEHAGRNQLLVSTLRVELTISPDFQWDEKLHGG-SEGFWILVEDV 700
             LK  Q ++ I    VM  A    +  + LRV L+I  DF W++++HG   E +WI VED 
Sbjct:  1170 LKVKQCVHQI--PSVMMEASIQPITRTVLRVTLSIYADFTWNDQVHGTVGEPWWIWVEDP 1227

Query:   701 DSEVVLHHEYFL-LKSRYATDD-HVVKFFVPVFEPLPPQYFLRIVSDRWIGAETILPVSF 758
              ++ + H EYFL LK +  + +  ++ F +P+FEPLP QY++R VSDRW+GAE +  ++F
Sbjct:  1228 TNDHIYHSEYFLALKKQVISKEAQLLVFTIPIFEPLPSQYYIRAVSDRWLGAEAVCIINF 1287

Query:   759 R 759
             +
Sbjct:  1288 Q 1288

 Score = 191 (72.3 bits), Expect = 2.3e-98, Sum P(4) = 2.3e-98
 Identities = 45/109 (41%), Positives = 62/109 (56%)

Query:   559 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 618
             DEIHLL +ERGPVLE +++RT      T++ VR+VGLS  L N +D+A  L IK + GLF
Sbjct:  1453 DEIHLLGEERGPVLEVIVSRTNFISSHTEKPVRIVGLSTALANARDLADWLNIK-QMGLF 1511

Query:   619 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQLLV 667
              F  S RPV LE    G   +    R   MN   ++ +  H+    +L+
Sbjct:  1512 NFRPSVRPVPLEVHIQGFPGQHYCPRMASMNKPAFQAIRSHSPAKPVLI 1560

 Score = 163 (62.4 bits), Expect = 6.6e-191, Sum P(5) = 6.6e-191
 Identities = 28/79 (35%), Positives = 50/79 (63%)

Query:  1600 IAPFYPQKREEGWWVVIGDPKTNSLLSIKRLTLQQKAKI-KLDFVAPN-PGHHSYALYFM 1657
             + P +P+ ++EGW++++G+     L+++KR+   +   +  L F  P  PG + Y LYFM
Sbjct:  2103 VTPRFPKSKDEGWFLILGEVDKRELIALKRVGYIRNHHVASLSFYTPEIPGRYIYTLYFM 2162

Query:  1658 SDAYLGCDQEYKFSIDVSE 1676
             SD YLG DQ+Y   ++V++
Sbjct:  2163 SDCYLGLDQQYDIYLNVTQ 2181

 Score = 143 (55.4 bits), Expect = 4.3e-173, Sum P(6) = 4.3e-173
 Identities = 28/54 (51%), Positives = 37/54 (68%)

Query:   761 PRGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNFGK 814
             P GAGKTN+A+L +L EI +H    G I  +EFKI+YVAPM++L  EM   F +
Sbjct:   500 PTGAGKTNIAMLTVLHEIRQHFQ-QGVIKKNEFKIVYVAPMKALAAEMTDYFSR 552

 Score = 109 (43.4 bits), Expect = 8.6e-97, Sum P(4) = 8.6e-97
 Identities = 28/94 (29%), Positives = 51/94 (54%)

Query:   463 VPIDKLPRYVQHAFEDFKTLNRIQSRLCKSALESDENLLLCAPTGAGKTNVALLCMLQEI 522
             +PI  L      A  +F   N +Q+++  +   +D N+LL APTG+GKT  A L + +  
Sbjct:  1308 LPITALGCKAYEALYNFSHFNPVQTQIFHTLYHTDCNVLLGAPTGSGKTVAAELAIFRVF 1367

Query:   523 GKHINADGTINADEFKIIYVAPMRSLVQEMVGNF 556
              K+  +         K +Y+AP+++LV+E + ++
Sbjct:  1368 NKYPTS---------KAVYIAPLKALVRERMDDW 1392

 Score = 99 (39.9 bits), Expect = 6.6e-191, Sum P(5) = 6.6e-191
 Identities = 19/48 (39%), Positives = 29/48 (60%)

Query:  1466 EAIRLIQACVDVLSSNGWLSPAVAAMEVAQMITQAMWSKDSYLKQLPH 1513
             +A+R+ QA +DV ++ GWL   +    + QM+ Q  W KDS L  LP+
Sbjct:  1919 QALRVCQAMLDVAANQGWLVTVLNITNLIQMVIQGRWLKDSSLLTLPN 1966

 Score = 91 (37.1 bits), Expect = 1.2e-76, Sum P(3) = 1.2e-76
 Identities = 43/225 (19%), Positives = 88/225 (39%)

Query:  1451 GGSEGFWILVED--VDSEAIRLIQACVDVLSSNGWLSPAVAAMEVAQMITQAMWSKDSYL 1508
             G  + F ++ +   V   A R+++A  ++     W +     + ++++I + +W   S L
Sbjct:  1068 GEMDSFSLISDSAYVAQNAARIVRALFEIALRKRWPTMTYRLLNLSKVIDKRLWGWASPL 1127

Query:  1509 KQLPHFNADIIKRCTEKGVETVFDIMXXXXXXXXXXXXXXXXXXADVARFCNRYPNIELS 1568
             +Q       I+ R  EK + TV D +                    V +  ++ P++ + 
Sbjct:  1128 RQFSILPPHILTRLEEKKL-TV-DKLKDMRKDEIGHILHHVNIGLKVKQCVHQIPSVMME 1185

Query:  1569 YEVLNKDRIXXXXXXXXXXXLDREDEVTGPVIAPFYPQKREEGWWVVIGDPKTNSL---- 1624
               +    R                D+V G V  P         WW+ + DP  + +    
Sbjct:  1186 ASIQPITRTVLRVTLSIYADFTWNDQVHGTVGEP---------WWIWVEDPTNDHIYHSE 1236

Query:  1625 --LSIKRLTLQQKAKIKLDFVAP--NPGHHSYALYFMSDAYLGCD 1665
               L++K+  + ++A++ L F  P   P    Y +  +SD +LG +
Sbjct:  1237 YFLALKKQVISKEAQL-LVFTIPIFEPLPSQYYIRAVSDRWLGAE 1280

 Score = 59 (25.8 bits), Expect = 7.4e-145, Sum P(6) = 7.4e-145
 Identities = 15/52 (28%), Positives = 29/52 (55%)

Query:   761 PRGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNF 812
             P G+GKT  A L + +   K+  +         K +Y+AP+++LV+E + ++
Sbjct:  1350 PTGSGKTVAAELAIFRVFNKYPTS---------KAVYIAPLKALVRERMDDW 1392

 Score = 50 (22.7 bits), Expect = 3.7e-11, Sum P(3) = 3.7e-11
 Identities = 13/51 (25%), Positives = 26/51 (50%)

Query:   258 DKSLHPLDIDA----YWLQRRLSKIYDDAMVSQAKAGEVLNILKSAGDDRD 304
             ++S+ PL        Y+L+ +  K++ D +  +    E+L+IL  A +  D
Sbjct:  1807 NRSIEPLTYGRIASYYYLKHQTVKMFKDRLKPECSTEELLSILSDAEEYTD 1857

 Score = 43 (20.2 bits), Expect = 4.4e-58, Sum P(4) = 4.4e-58
 Identities = 13/31 (41%), Positives = 16/31 (51%)

Query:   661 GRNQLLVSTLRVELTISPDFQWDEKLHGGSE 691
             G N+L VSTL  +     D +W  KLH   E
Sbjct:  2052 GHNELSVSTLTADKR--DDNKWI-KLHADQE 2079

 Score = 41 (19.5 bits), Expect = 3.7e-88, Sum P(5) = 3.7e-88
 Identities = 7/28 (25%), Positives = 15/28 (53%)

Query:  1419 LELATHIQPITRSTLRVELTISPDFQWD 1446
             +EL   + P  +S  + +L ++   +WD
Sbjct:  1405 IELTGDVTPDMKSIAKADLIVTTPEKWD 1432

 Score = 40 (19.1 bits), Expect = 4.3e-173, Sum P(6) = 4.3e-173
 Identities = 12/43 (27%), Positives = 20/43 (46%)

Query:   625 RPVALEQ-QYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQLL 666
             +PV ++    IG    K +KR   +  IV+E    +   N L+
Sbjct:   456 KPVYIQDLDEIGQLAFKGMKRLNRIQSIVFETAY-NTNENMLI 497

 Score = 40 (19.1 bits), Expect = 2.2e-111, Sum P(4) = 2.2e-111
 Identities = 12/43 (27%), Positives = 20/43 (46%)

Query:   881 RPVALEQ-QYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQLL 922
             +PV ++    IG    K +KR   +  IV+E    +   N L+
Sbjct:   456 KPVYIQDLDEIGQLAFKGMKRLNRIQSIVFETAY-NTNENMLI 497


>DICTYBASE|DDB_G0290389 [details] [associations]
            symbol:ascc3 "activating signal cointegrator 1
            complex subunit" species:44689 "Dictyostelium discoideum"
            [GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0008150 "biological_process" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00382 SMART:SM00490 dictyBase:DDB_G0290389 GO:GO:0005524
            GO:GO:0006355 GO:GO:0006351 GenomeReviews:CM000154_GR GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 OMA:FPGKHYC
            InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
            eggNOG:COG1204 GO:GO:0008026 EMBL:AAFI02000163 RefSeq:XP_635715.1
            ProteinModelPortal:Q54G57 EnsemblProtists:DDB0233132 GeneID:8627633
            KEGG:ddi:DDB_G0290389 InParanoid:Q54G57 KO:K15271
            ProtClustDB:CLSZ2429672 Uniprot:Q54G57
        Length = 2195

 Score = 982 (350.7 bits), Expect = 4.8e-186, Sum P(6) = 4.8e-186
 Identities = 192/441 (43%), Positives = 283/441 (64%)

Query:  1028 DRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQM 1087
             DR +VE  FA+  I+VLV TATLAWGVNLPAHTVIIKGTQ+YN + G +++LG  DV+Q+
Sbjct:   792 DRNVVEKYFANGTIKVLVCTATLAWGVNLPAHTVIIKGTQVYNAKNGGFMDLGISDVMQI 851

Query:  1088 LGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMISKLPDMLNAEIVLGTVQN 1147
              GRAGRPQ+DT GEG L+T+  +L +YLSL++  +P+ES+ I+ L D LNAEIVLGTV N
Sbjct:   852 FGRAGRPQFDTSGEGFLLTSKDKLDHYLSLMSSSMPIESKFITNLEDHLNAEIVLGTVSN 911

Query:  1148 LKDAVTWLGYTYLYIRMLRAPNLYGISHDALKEDPLLECHRADLIHTAALHLERSGLIKY 1207
             + +AV WL YTYL+IRML+ P +YGI      +DP LE  + ++I  AA  LE+  + ++
Sbjct:   912 VNEAVNWLSYTYLFIRMLQNPLVYGIPSSQRSKDPQLEEFKREIIIRAAKKLEQCKMTRF 971

Query:  1208 DRKSGHMQVTELGRIASHYYCTHETMATYNQLLKPTLSEIELFRVFSLSGEFRHITVRXX 1267
             D +S ++ +TELGRIASHYY  H ++ T+N++L   L + ++  + S S EF +IT+R  
Sbjct:   972 DEQSENLGMTELGRIASHYYIKHPSIETFNEMLNDQLGQDQVLNILSNSSEFENITLREE 1031

Query:  1268 XXXXXXXXXXRAPIPIKESTDEPSAKVNILLQAYISQLKLEGFALMSDMVFVTQSAARLM 1327
                                 D  S KV  LLQA+ S+  ++GF+L+SD  +  Q+++R++
Sbjct:  1032 ESTELDKLAENQCYYELTVLDSHS-KVKCLLQAFFSRANIDGFSLVSDSNYTVQNSSRIL 1090

Query:  1328 RAIFEIVLYRGWAQLADKALSLCKMVDRRMWQSMSPLRQFRXXXXXXXXXXXXXNFPWER 1387
             R +FEI L +GW  ++   L LCKMVD ++W   SPLRQ +             ++  ER
Sbjct:  1091 RGLFEISLKKGWCTVSKTILDLCKMVDHQLWHFESPLRQAKVLSLDTIRKIEERDWTPER 1150

Query:  1388 LYDLGPNEIGELIRVPKLGKTIHKYVHQFPKLELATHIQPITRSTLRVELTISPDFQWDE 1447
             + D+   E+  ++    + KT  K   QFP+L+    +QPIT + +R+ +T+ P F W++
Sbjct:  1151 ICDMEIGELSFVLGNQLIAKTTRKIAQQFPQLDFEIQVQPITANIIRINMTLIPMFSWND 1210

Query:  1448 KLHGGSEGFWILVEDVDSEAI 1468
             K+HG S+ FWI V+D +S+ I
Sbjct:  1211 KMHGDSQPFWIWVQDNESQYI 1231

 Score = 529 (191.3 bits), Expect = 4.8e-186, Sum P(6) = 4.8e-186
 Identities = 109/215 (50%), Positives = 151/215 (70%)

Query:   815 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 874
             DEIHLLH+ERGPVLE ++ART+R +E TQE +R+VGLSATLPNYKDVA  +R  P +G  
Sbjct:   617 DEIHLLHEERGPVLECIVARTLRQVETTQEMIRIVGLSATLPNYKDVARFIRA-PASGTH 675

Query:   875 YFDNSFRPVALEQQYIGVTEKKALKRFQV-MNDIVYEKVMEHAGR-NQLLVFVHSRKETG 932
             +FD+S+RPV L Q +IGV + + +   +  MN + YE++ +     +Q+++FVHSRK+T 
Sbjct:   676 FFDSSYRPVPLTQNFIGVKDNQGIMVMKNNMNQLCYERLEKSLKEGHQVMIFVHSRKDTV 735

Query:   933 KTARAIRDMCLEKDTLGQFLREGSASMEVLRTEADQVKNGELRDLLPYGFAIHHAGMTRV 992
             K+A  + DM  EK    +F  E   S    + E ++VK+ E+R L  +G ++HHAG+ R 
Sbjct:   736 KSAEILSDMAKEKHF--RFSNE-EPSFGA-KKEFEKVKSKEIRSLFQHGISVHHAGLLRS 791

Query:   993 DRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
             DR +VE  FA+  I+VLV TATLAWGVNLPAHTV+
Sbjct:   792 DRNVVEKYFANGTIKVLVCTATLAWGVNLPAHTVI 826

 Score = 500 (181.1 bits), Expect = 3.3e-126, Sum P(6) = 3.3e-126
 Identities = 118/355 (33%), Positives = 202/355 (56%)

Query:  1014 TLAWGVNLPAHTVV---DRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYN 1070
             TL++G+ +  H  +   DRT+VE LF +  IQ+L+ST+TLAWGVNLPAH VIIKGT+ ++
Sbjct:  1610 TLSFGIGMH-HAGLNDGDRTIVESLFGENKIQILISTSTLAWGVNLPAHLVIIKGTEYFD 1668

Query:  1071 PEKGRWVELGALDVLQMLGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMIS 1130
              +  R+V+    DVLQM+GRAGRPQ+D +G+ +++ +  + Q+Y   L    PVES +  
Sbjct:  1669 GKTKRYVDFPLTDVLQMIGRAGRPQFDKEGKAMVMVHEPKKQFYKKFLYDPFPVESHLKD 1728

Query:  1131 KLPDMLNAEIVLGTVQNLKDAVTWLGYTYLYIRMLRAPNLYGISHDALKEDPLLECHRAD 1190
              L D LNAEIV GT+Q+ + A+ +L  T+ + R++ +P+ YG+  ++++    +  + +D
Sbjct:  1729 FLHDHLNAEIVSGTIQSKQGAINYLVNTFFFRRLVVSPSYYGLEDNSVEA---VNQYLSD 1785

Query:  1191 LIHTAALHLERSGLIKYDRKSGHMQVTELGRIASHYYCTHETMATYNQLLKPTLSEIE-L 1249
             L+ +    LE+S  I+ +     + ++ +G+IAS YY  ++T+  ++  +K   S+I+ L
Sbjct:  1786 LLDSTLADLEQSSCIEINEYDEIIPMS-MGKIASFYYLNYKTVQNFSDNIKRD-SDIKTL 1843

Query:  1250 FRVFSLSGEFRHITVRXXXXXXXXXXXXRAPIPIKESTDEPSAKVNILLQAYISQLKLEG 1309
              RV S + E+    VR              PI I    D  + KV++LLQA+  +  L  
Sbjct:  1844 LRVLSDAAEYSEFPVRHNEEILNQELNENLPIKIGNYEDSHT-KVHLLLQAHFQRCPLPI 1902

Query:  1310 FALMSDMVFVTQSAARLMRAIFEIVLYRGWAQLADKALSLCKMVDRRMWQSMSPL 1364
                 +D         R+++A+ ++    G+   A + + L +M+ +  W   S L
Sbjct:  1903 TDFTTDTKSALDQGIRILQAMIDVSFEYGYFATAIQVIRLLQMLVQGRWDYDSSL 1957

 Score = 362 (132.5 bits), Expect = 3.3e-126, Sum P(6) = 3.3e-126
 Identities = 84/214 (39%), Positives = 128/214 (59%)

Query:   815 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 874
             DEIHL+ + RGP+LE +++R     + T  ++R+VGLS  + N  D++  + I    GLF
Sbjct:  1453 DEIHLIGELRGPILEVIVSRMKLISKQTGVNIRVVGLSTAMANAIDLSEWMGID-RVGLF 1511

Query:   875 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQLLVFVHSRKETGKT 934
              F  S RPV +E    G   K    R Q MN   +  +  ++ +  +L+FV SR++T  T
Sbjct:  1512 NFRPSCRPVPIEVHIQGFQGKNYCPRMQTMNKPSFAAIATYSPKKPVLIFVSSRRQTRLT 1571

Query:   935 AR-AIRDMCLEKDTLGQFLREGSASMEVLRTEADQVKNGELRDLLPYGFAIHHAGMTRVD 993
             A   I  + ++ D L Q++++G    ++  T A +VK+  LR  L +G  +HHAG+   D
Sbjct:  1572 ALDLISYLVVDNDPL-QWIQKG---FDIEPTLA-RVKDQHLRHTLSFGIGMHHAGLNDGD 1626

Query:   994 RTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
             RT+VE LF +  IQ+L+ST+TLAWGVNLPAH V+
Sbjct:  1627 RTIVESLFGENKIQILISTSTLAWGVNLPAHLVI 1660

 Score = 314 (115.6 bits), Expect = 4.8e-186, Sum P(6) = 4.8e-186
 Identities = 98/343 (28%), Positives = 164/343 (47%)

Query:   270 WLQRRLSKIYDDAMV-SQAKAGEVLNILKSAGDDRDAENQLVLLLGYDCFDFIKMLKKYR 328
             WL+   S I     + S+     +++ LK+  +    E  ++ LLG+D  + I  + KYR
Sbjct:   274 WLREECSVISIGLGIPSEEIYNTIMSFLKNKKET--IEEDMIGLLGFDHLELIADIIKYR 331

Query:   329 QMILYCTLLASSQSESERQKLRDTMSEDPALAKILRQLDTGKNEDGDANDSADARQSTSI 388
               IL  ++++  ++ +    L     +     K  +  D    +D       D +Q    
Sbjct:   332 DSILG-SVVSGYRASNHSGPLNHFSIQ----TKDEKDFDKQLKKDDKKRYKNDQQQQQQQ 386

Query:   389 RHQMXXXXXXXXXXXXXTRQVLDLEDLQFSSGSHFMS---NKRCELPDGSFRKQRKGYEE 445
             ++Q               +  +     +F+ G   +      +  LP G+ R ++  + E
Sbjct:   387 QYQEEQIKFIDHSQQSFEQPTI-YNQKEFTGGDVCIDLPYGGKIALPKGTVRTEKTTHTE 445

Query:   446 VHVPALKPKPMGPDETLVPI-DKLPRYVQHAFEDFKTLNRIQSRLCKSALESDENLLLCA 504
             V VP    KP   +E L+ I + +    + AF   K LNRIQSR+ +SA +S+EN+L+ A
Sbjct:   446 VMVPYSLAKPFADNEKLIEIGESIAEISRAAFGSIKKLNRIQSRVFESAYKSNENILISA 505

Query:   505 PTGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNFGKDEIHLL 564
             PTGAGKTN+ALL +L EI  +IN  G ++ D FKIIY+AP+++L  EMV  F     +L 
Sbjct:   506 PTGAGKTNIALLTILHEIESNINPYGYLDKDNFKIIYIAPLKALASEMVEKFSNSLKYL- 564

Query:   565 HDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVAT 607
                 G V + L      +++ TQ++++   +  T P   DV T
Sbjct:   565 ----GIVSKELTG----DMQLTQKELKETQIIVTTPEKWDVIT 599

 Score = 289 (106.8 bits), Expect = 1.9e-132, Sum P(5) = 1.9e-132
 Identities = 55/99 (55%), Positives = 75/99 (75%)

Query:   559 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 618
             DEIHLLH+ERGPVLE ++ART+R +E TQE +R+VGLSATLPNYKDVA  +R  P +G  
Sbjct:   617 DEIHLLHEERGPVLECIVARTLRQVETTQEMIRIVGLSATLPNYKDVARFIRA-PASGTH 675

Query:   619 YFDNSFRPVALEQQYIGVTEKKALKRFQV-MNDIVYEKV 656
             +FD+S+RPV L Q +IGV + + +   +  MN + YE++
Sbjct:   676 FFDSSYRPVPLTQNFIGVKDNQGIMVMKNNMNQLCYERL 714

 Score = 232 (86.7 bits), Expect = 3.3e-126, Sum P(6) = 3.3e-126
 Identities = 51/146 (34%), Positives = 84/146 (57%)

Query:   665 LLVSTLRVELTISPDFQWDEKLHGGSEGFWILVEDVDSEVVLHHEYFLL-KSRY-ATDDH 722
             +  + +R+ +T+ P F W++K+HG S+ FWI V+D +S+ + H EYF+L K  Y  T+  
Sbjct:  1191 ITANIIRINMTLIPMFSWNDKMHGDSQPFWIWVQDNESQYIFHSEYFMLTKKIYNQTEPI 1250

Query:   723 VVKFFVPVFEPLPPQYFLRIVSDRWIGAETILPVSFR---LPRGAGKTNVALLCMLQEIG 779
              +   +P+  P+P Q+FL  +SDRW+G+E I  +SFR   LP+     N  LL  LQ + 
Sbjct:  1251 TLTCIIPLPNPMPSQFFLHYISDRWLGSEGIREISFRHLVLPQQDRVVNTELLD-LQPLP 1309

Query:   780 KHINADGTINADEFKIIYVAPMRSLV 805
             K    +    +  FK  +  P+++ V
Sbjct:  1310 KEALKNKDFES-LFKFSHFNPIQTQV 1334

 Score = 162 (62.1 bits), Expect = 3.7e-119, Sum P(5) = 3.7e-119
 Identities = 45/123 (36%), Positives = 67/123 (54%)

Query:   741 RIVSDRWIGAETILPVSFRLPRGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAP 800
             R+    +   E IL +S   P GAGKTN+ALL +L EI  +IN  G ++ D FKIIY+AP
Sbjct:   489 RVFESAYKSNENIL-IS--APTGAGKTNIALLTILHEIESNINPYGYLDKDNFKIIYIAP 545

Query:   801 MRSLVQEMVGNFGKDEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKD 860
             +++L  EMV  F     +L     G V + L      +++ TQ++++   +  T P   D
Sbjct:   546 LKALASEMVEKFSNSLKYL-----GIVSKELTG----DMQLTQKELKETQIIVTTPEKWD 596

Query:   861 VAT 863
             V T
Sbjct:   597 VIT 599

 Score = 150 (57.9 bits), Expect = 2.5e-61, Sum P(6) = 2.5e-61
 Identities = 36/109 (33%), Positives = 58/109 (53%)

Query:   559 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 618
             DEIHL+ + RGP+LE +++R     + T  ++R+VGLS  + N  D++  + I    GLF
Sbjct:  1453 DEIHLIGELRGPILEVIVSRMKLISKQTGVNIRVVGLSTAMANAIDLSEWMGID-RVGLF 1511

Query:   619 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQLLV 667
              F  S RPV +E    G   K    R Q MN   +  +  ++ +  +L+
Sbjct:  1512 NFRPSCRPVPIEVHIQGFQGKNYCPRMQTMNKPSFAAIATYSPKKPVLI 1560

 Score = 110 (43.8 bits), Expect = 4.8e-186, Sum P(6) = 4.8e-186
 Identities = 20/52 (38%), Positives = 30/52 (57%)

Query:  1466 EAIRLIQACVDVLSSNGWLSPAVAAMEVAQMITQAMWSKDSYLKQLPHFNAD 1517
             + IR++QA +DV    G+ + A+  + + QM+ Q  W  DS L  LPH N D
Sbjct:  1915 QGIRILQAMIDVSFEYGYFATAIQVIRLLQMLVQGRWDYDSSLMTLPHINKD 1966

 Score = 97 (39.2 bits), Expect = 4.8e-186, Sum P(6) = 4.8e-186
 Identities = 22/81 (27%), Positives = 37/81 (45%)

Query:  1597 GPVIAPFYPQKREEGWWVVIGDPKTNSLLSIKRLTLQQKAKIKLDFVAPNPGHHS---YA 1653
             G   AP Y + ++EGW +V+ D K   ++  KR+       +  +F  P     S   Y 
Sbjct:  2088 GHAFAPLYSKDKDEGWIMVLTDEK-EQMIGFKRVPQMISNSVTANFKIPKAPFQSSTNYN 2146

Query:  1654 LYFMSDAYLGCDQEYKFSIDV 1674
             +   SD Y+G D  + F + +
Sbjct:  2147 VKLYSDTYMGLDYFHTFQVPI 2167

 Score = 95 (38.5 bits), Expect = 2.7e-83, Sum P(6) = 2.7e-83
 Identities = 24/78 (30%), Positives = 45/78 (57%)

Query:   479 FKTLNRIQSRLCKSALESDENLLLCAPTGAGKTNVALLCMLQEIGKHINADGTINADEFK 538
             F   N IQ+++  +   ++ N+LL +PTG+GKT  A L M +     +  D        K
Sbjct:  1324 FSHFNPIQTQVFHTLYYTNNNVLLGSPTGSGKTICAELAMFK-----VFRD----EPHMK 1374

Query:   539 IIYVAPMRSLVQEMVGNF 556
             ++Y+AP+++LV+E + ++
Sbjct:  1375 VVYIAPLKALVRERMNDW 1392

 Score = 72 (30.4 bits), Expect = 4.8e-80, Sum P(5) = 4.8e-80
 Identities = 16/75 (21%), Positives = 38/75 (50%)

Query:  1454 EGFWILVEDVD---SEAIRLIQACVDVLSSNGWLSPAVAAMEVAQMITQAMWSKDSYLKQ 1510
             +GF  LV D +     + R+++   ++    GW + +   +++ +M+   +W  +S L+Q
Sbjct:  1071 DGF-SLVSDSNYTVQNSSRILRGLFEISLKKGWCTVSKTILDLCKMVDHQLWHFESPLRQ 1129

Query:  1511 LPHFNADIIKRCTEK 1525
                 + D I++  E+
Sbjct:  1130 AKVLSLDTIRKIEER 1144

 Score = 60 (26.2 bits), Expect = 2.7e-108, Sum P(6) = 2.7e-108
 Identities = 16/52 (30%), Positives = 29/52 (55%)

Query:   761 PRGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNF 812
             P G+GKT  A L M +     +  D        K++Y+AP+++LV+E + ++
Sbjct:  1350 PTGSGKTICAELAMFK-----VFRD----EPHMKVVYIAPLKALVRERMNDW 1392

 Score = 55 (24.4 bits), Expect = 4.8e-186, Sum P(6) = 4.8e-186
 Identities = 21/88 (23%), Positives = 38/88 (43%)

Query:    62 IKAEERKVKRQKRDEAQYDFTRM--KGATLLSEGVDEMVGIIYRPKTQETRQTYEVLLSF 119
             + A  +++ + KR+E + +  R+  KG    S   D       + K +E RQ +      
Sbjct:    33 VVARNKEIMK-KRNEKKKEKDRIIEKGQLTWSYFSDSKQN---KEKEKENRQIFNKFKEI 88

Query:   120 IQEALGDQ--PRDILCGAADEVLTVLKN 145
             + E +GD   P D +  A  E   ++ N
Sbjct:    89 VLEMIGDDEIPSDEIASAVYETFMIVAN 116

 Score = 47 (21.6 bits), Expect = 9.5e-174, Sum P(5) = 9.5e-174
 Identities = 8/21 (38%), Positives = 14/21 (66%)

Query:  1645 PNPGHHSYALYFMSDAYLGCD 1665
             PNP    + L+++SD +LG +
Sbjct:  1259 PNPMPSQFFLHYISDRWLGSE 1279

 Score = 38 (18.4 bits), Expect = 1.7e-97, Sum P(6) = 1.7e-97
 Identities = 7/33 (21%), Positives = 19/33 (57%)

Query:   269 YWLQRRLSKIYDDAMVSQAKAGEVLNILKSAGD 301
             Y+++    + +++ +  Q    +VLNIL ++ +
Sbjct:   990 YYIKHPSIETFNEMLNDQLGQDQVLNILSNSSE 1022

 Score = 38 (18.4 bits), Expect = 2.4e-73, Sum P(5) = 2.4e-73
 Identities = 13/28 (46%), Positives = 16/28 (57%)

Query:   952 LREGSASMEVLRTEADQVKNGELRDLLP 979
             +RE S    VL  + D+V N EL DL P
Sbjct:  1281 IREISFRHLVL-PQQDRVVNTELLDLQP 1307

 Score = 37 (18.1 bits), Expect = 4.9e-157, Sum P(6) = 4.9e-157
 Identities = 6/20 (30%), Positives = 13/20 (65%)

Query:   803 SLVQEMVGNFGKDEIHLLHD 822
             ++ ++M+G  G D + L+ D
Sbjct:   307 TIEEDMIGLLGFDHLELIAD 326

 Score = 37 (18.1 bits), Expect = 1.1e-155, Sum P(5) = 1.1e-155
 Identities = 6/18 (33%), Positives = 12/18 (66%)

Query:     6 ARQLQYEYKANSNLVLQA 23
             +R  +  YK+N N+++ A
Sbjct:   488 SRVFESAYKSNENILISA 505


>FB|FBgn0038344 [details] [associations]
            symbol:CG5205 species:7227 "Drosophila melanogaster"
            [GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004386
            "helicase activity" evidence=ISS] [GO:0005682 "U5 snRNP"
            evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
            evidence=ISS] [GO:0030532 "small nuclear ribonucleoprotein complex"
            evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] InterPro:IPR001650
            InterPro:IPR003593 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00382 SMART:SM00490 EMBL:AE014297
            GO:GO:0005524 GO:GO:0006200 GO:GO:0005682 GO:GO:0003676
            GO:GO:0004386 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GeneTree:ENSGT00700000104562 KO:K01529 OMA:FPGKHYC
            InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
            GO:GO:0008026 GO:GO:0016779 FlyBase:FBgn0038344 RefSeq:NP_650472.2
            UniGene:Dm.1213 ProteinModelPortal:Q9VF56 SMR:Q9VF56
            EnsemblMetazoa:FBtr0083147 GeneID:41891 KEGG:dme:Dmel_CG5205
            UCSC:CG5205-RA InParanoid:Q9VF56 PhylomeDB:Q9VF56 GenomeRNAi:41891
            NextBio:826131 ArrayExpress:Q9VF56 Bgee:Q9VF56 Uniprot:Q9VF56
        Length = 2183

 Score = 921 (329.3 bits), Expect = 1.3e-183, Sum P(7) = 1.3e-183
 Identities = 182/444 (40%), Positives = 279/444 (62%)

Query:  1028 DRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQM 1087
             DR +VE  F + HI VLV TATLAWGVNLPAH VII+GT IY+ + G +V+LG LDVLQ+
Sbjct:   800 DRQMVEKYFVEGHISVLVCTATLAWGVNLPAHAVIIRGTDIYDAKHGSFVDLGILDVLQI 859

Query:  1088 LGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMISKLPDMLNAEIVLGTVQN 1147
              GRAGRPQ+D  G G +IT++ +L +YLSLL +Q P+ES  ++ L D LNAEI LGT+ N
Sbjct:   860 FGRAGRPQFDKSGVGTIITSYDKLNHYLSLLTNQFPIESNFVNCLADNLNAEIGLGTITN 919

Query:  1148 LKDAVTWLGYTYLYIRMLRAPNLYGISHDALKEDPLLECHRADLIHTAALHLERSGLIKY 1207
             + +A+ WL YTYL++RM   P++YGI +  L++DP LE  R  LI +AA+ L+++ ++++
Sbjct:   920 VDEAIEWLSYTYLFVRMRINPHVYGIEYSELEKDPTLEARRRALIMSAAMSLDKARMMRF 979

Query:  1208 DRKSGHMQVTELGRIASHYYCTHETMATYNQLLKPTLSEIELFRVFSLSGEFRHITVRXX 1267
             ++++  M +T+LGR AS++Y  ++T+ T+N+L+KP +++ E+  + S + EF+ + VR  
Sbjct:   980 NQRTMDMNITDLGRTASYFYIKYDTVETFNELMKPFMTQAEILAMISQAQEFQQLKVRDD 1039

Query:  1268 XXXXXXXXXXRAPIPIKE--STDEPSAKVNILLQAYISQLKLEGFALMSDMVFVTQSAAR 1325
                        A   IK    ++    KVNIL+Q Y+S   ++ F+L SDM ++T +  R
Sbjct:  1040 EMEELDELK-NAYCKIKPYGGSENVHGKVNILIQTYLSNGYVKSFSLSSDMSYITTNIGR 1098

Query:  1326 LMRAIFEIVLYRGWAQLADKALSLCKMVDRRMWQSMSPLRQFRXXXXXXXXXXXXXNFPW 1385
             + RA+F IVL +  A L+   L LCKM +RR W     L+QF                  
Sbjct:  1099 ISRALFSIVLRQNNAVLSGNMLQLCKMFERRQWDFDCHLKQFPTINAETIDKLERRGLSV 1158

Query:  1386 ERLYDLGPNEIGELIRVPKLGKTIHKYVHQFPKLELATHIQPITRSTLRVELTISPDFQW 1445
              RL D+   E+ E +R       + +  H+ P LE+   +QPITR+ LR+++ I P F W
Sbjct:  1159 YRLRDMEHRELKEWLRSNTYADLVIRSAHELPLLEVEASLQPITRTVLRIKVDIWPSFTW 1218

Query:  1446 DEKLHGGS-EGFWILVEDVDSEAI 1468
             ++++HG + + FW+ +ED +S  I
Sbjct:  1219 NDRVHGKTCQSFWLWIEDPESNYI 1242

 Score = 550 (198.7 bits), Expect = 1.3e-183, Sum P(7) = 1.3e-183
 Identities = 109/227 (48%), Positives = 152/227 (66%)

Query:   815 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 874
             DE+HLLH ERGPV+EAL+ART+R +E++Q  +R+VGLSATLPNY DVA  LR+ P  GLF
Sbjct:   621 DEVHLLHGERGPVVEALVARTLRLVESSQSMIRIVGLSATLPNYIDVAHFLRVNPMKGLF 680

Query:   875 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGR-NQLLVFVHSRKETGK 933
             YFD+ FRPV L+  ++G+   K L++   M+   Y+K +E     +Q++VFVH+R  T +
Sbjct:   681 YFDSRFRPVPLDTNFVGIKSVKQLQQIADMDQCCYQKCVEMVQEGHQIMVFVHARNATVR 740

Query:   934 TARAIRDMCLEKDTLGQFLREGSASMEVLRTEADQVKNGELRDLLPYGFAIHHAGMTRVD 993
             TA  IR++  + +T   FL + SA+  +      + +N +L +L   G A+HHAGM R D
Sbjct:   741 TANVIRELAQQNNTSALFLPKDSAAHGLATRSIQRSRNKQLVELFSCGLAMHHAGMLRAD 800

Query:   994 RTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVVDRTLVEDLFADRH 1040
             R +VE  F + HI VLV TATLAWGVNLPAH V+ R    D++  +H
Sbjct:   801 RQMVEKYFVEGHISVLVCTATLAWGVNLPAHAVIIRGT--DIYDAKH 845

 Score = 495 (179.3 bits), Expect = 3.8e-135, Sum P(7) = 3.8e-135
 Identities = 118/348 (33%), Positives = 191/348 (54%)

Query:  1015 LAWGVNLPAHTVV---DRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNP 1071
             LA+G+ L  H  +   DR  VE+LF +R IQ+LV+TATLAWGVNLPAH V+IKGT+ ++ 
Sbjct:  1623 LAFGIGLH-HAGLQEQDRKCVEELFLNRKIQILVATATLAWGVNLPAHLVVIKGTEYFDG 1681

Query:  1072 EKGRWVELGALDVLQMLGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMISK 1131
             +  ++V++   DVLQM+GRAGRPQ+D +G  V++ +  +  +Y   L    PVES ++  
Sbjct:  1682 KVKKYVDMPITDVLQMMGRAGRPQFDNEGVAVVLVHDEKKNFYKKFLYDPFPVESSLLGV 1741

Query:  1132 LPDMLNAEIVLGTVQNLKDAVTWLGYTYLYIRMLRAPNLYGISHDALKEDPLLECHRADL 1191
             LP+ +NAEIV GTVQ+ + A+ +L +TY + R+LR P+ Y +  D   E+  +    ++L
Sbjct:  1742 LPEHINAEIVAGTVQSKQAALDYLTWTYFFRRLLRNPSYYQLQ-DIEPEN--VNNFMSNL 1798

Query:  1192 IHTAALHLERSGLIKYDRKSGHMQVTELGRIASHYYCTHETMATYNQLLKPTLSEIELFR 1251
             +      L  +  +    + G +  T LGRI+S+YY ++ TM  + + L+P ++  ++  
Sbjct:  1799 VERVVYELSAAACLV--ERDGCLIPTFLGRISSYYYLSYRTMKHFLEDLQPGMNTKKVLL 1856

Query:  1252 VFSLSGEFRHITVRXXXXXXXXXXXXRAPI-PIKESTDEPSAKVNILLQAYISQLKLEGF 1310
               + S EF  + VR             +   P   S D    K  +LLQA+ ++  L   
Sbjct:  1857 AIADSYEFDQLPVRHNEDKHNEEMAEVSRFRPPSSSWDSSYTKTFLLLQAHFARQSLPNS 1916

Query:  1311 ALMSDMVFVTQSAARLMRAIFEIVLYRGWAQLADKALSLCKMVDRRMW 1358
               ++D      +A R+M+A+ +    RGW         L + V +  W
Sbjct:  1917 DYLTDTKSALDNATRVMQAMVDYTAERGWLSTTLVVQQLMQSVIQARW 1964

 Score = 358 (131.1 bits), Expect = 4.7e-133, Sum P(9) = 4.7e-133
 Identities = 83/213 (38%), Positives = 119/213 (55%)

Query:   815 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 874
             DEIHLL ++RGPV+E +++RT      T   +R+VGLS  L N +D+A  L I  + GL+
Sbjct:  1464 DEIHLLGEDRGPVIEVIVSRTNFISSHTGRAIRIVGLSTALANAQDLANWLGIN-KMGLY 1522

Query:   875 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQLLVFVHSRKETGKT 934
              F  S RPV L+    G   K    R   MN   ++ +  ++     +VFV SR++T  T
Sbjct:  1523 NFKPSVRPVPLQVHINGFPGKHYCPRMATMNRPTFQAIRTYSPCEPTIVFVSSRRQTRLT 1582

Query:   935 ARAIRDMCLEKDTLGQFLREGSASMEVLRTEADQVKNGELRDLLPYGFAIHHAGMTRVDR 994
             A  +      +    QFL      +E++      ++   L+  L +G  +HHAG+   DR
Sbjct:  1583 ALDLITFVAGESNPKQFLHIPEDEIELI---LQNIREQNLKFCLAFGIGLHHAGLQEQDR 1639

Query:   995 TLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
               VE+LF +R IQ+LV+TATLAWGVNLPAH VV
Sbjct:  1640 KCVEELFLNRKIQILVATATLAWGVNLPAHLVV 1672

 Score = 317 (116.6 bits), Expect = 1.3e-183, Sum P(7) = 1.3e-183
 Identities = 77/196 (39%), Positives = 108/196 (55%)

Query:   414 DLQFSSGSH--FMSNKRCELPDGSFRKQRKGYEEVHVPALKPKPMGPDETLVPIDKLPRY 471
             D Q  +  H  F+   R  LPD + R   K +EEV +PA +P P+      V I++L   
Sbjct:   417 DSQLLAKQHAGFIGGSRITLPDNAQRIDNKQWEEVKIPASEPPPLSVGNKRVQIEELDDV 476

Query:   472 VQHAFEDFKTLNRIQSRLCKSALESDENLLLCAPTGAGKTNVALLCMLQEIGKHINADGT 531
              + AF + K LNRIQS +   A  S+EN+L+CAPTGAGKTNVA+L ++  I  H+   G 
Sbjct:   477 GRLAFANCKELNRIQSVVFPVAYHSNENMLVCAPTGAGKTNVAMLSIVHTIRCHLE-QGV 535

Query:   532 INADEFKIIYVAPMRSLVQEMVGNFGKDEIHLLHDERGPVLEALIARTIRNIEATQEDVR 591
             IN DEFKI+Y+APM++L  EMV NF K         R   L+  +     +I+ T+ ++ 
Sbjct:   536 INRDEFKIVYIAPMKALAAEMVDNFSK---------RLKSLQIAVRELTGDIQLTKAEMA 586

Query:   592 LVGLSATLPNYKDVAT 607
                +  T P   DV T
Sbjct:   587 ATQILVTTPEKWDVVT 602

 Score = 300 (110.7 bits), Expect = 2.7e-131, Sum P(9) = 2.7e-131
 Identities = 57/110 (51%), Positives = 80/110 (72%)

Query:   559 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 618
             DE+HLLH ERGPV+EAL+ART+R +E++Q  +R+VGLSATLPNY DVA  LR+ P  GLF
Sbjct:   621 DEVHLLHGERGPVVEALVARTLRLVESSQSMIRIVGLSATLPNYIDVAHFLRVNPMKGLF 680

Query:   619 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGR-NQLLV 667
             YFD+ FRPV L+  ++G+   K L++   M+   Y+K +E     +Q++V
Sbjct:   681 YFDSRFRPVPLDTNFVGIKSVKQLQQIADMDQCCYQKCVEMVQEGHQIMV 730

 Score = 199 (75.1 bits), Expect = 4.7e-133, Sum P(9) = 4.7e-133
 Identities = 33/95 (34%), Positives = 60/95 (63%)

Query:   668 STLRVELTISPDFQWDEKLHGGS-EGFWILVEDVDSEVVLHHEYFLLKSRYATDDHVVKF 726
             + LR+++ I P F W++++HG + + FW+ +ED +S  + H E F +  +        + 
Sbjct:  1204 TVLRIKVDIWPSFTWNDRVHGKTCQSFWLWIEDPESNYIYHSELFQVTRKLVMSGQSQQL 1263

Query:   727 F--VPVFEPLPPQYFLRIVSDRWIGAETILPVSFR 759
                +P+ EPLPPQY++R+ SD W+G+ T +P+SF+
Sbjct:  1264 VMTIPLKEPLPPQYYIRVSSDNWLGSTTCIPLSFQ 1298

 Score = 164 (62.8 bits), Expect = 1.4e-114, Sum P(6) = 1.4e-114
 Identities = 40/103 (38%), Positives = 56/103 (54%)

Query:   761 PRGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNFGKDEIHLL 820
             P GAGKTNVA+L ++  I  H+   G IN DEFKI+Y+APM++L  EMV NF K      
Sbjct:   510 PTGAGKTNVAMLSIVHTIRCHLE-QGVINRDEFKIVYIAPMKALAAEMVDNFSK------ 562

Query:   821 HDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVAT 863
                R   L+  +     +I+ T+ ++    +  T P   DV T
Sbjct:   563 ---RLKSLQIAVRELTGDIQLTKAEMAATQILVTTPEKWDVVT 602

 Score = 160 (61.4 bits), Expect = 1.0e-74, Sum P(7) = 1.0e-74
 Identities = 38/102 (37%), Positives = 56/102 (54%)

Query:   559 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 618
             DEIHLL ++RGPV+E +++RT      T   +R+VGLS  L N +D+A  L I  + GL+
Sbjct:  1464 DEIHLLGEDRGPVIEVIVSRTNFISSHTGRAIRIVGLSTALANAQDLANWLGIN-KMGLY 1522

Query:   619 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHA 660
              F  S RPV L+    G   K    R   MN   ++ +  ++
Sbjct:  1523 NFKPSVRPVPLQVHINGFPGKHYCPRMATMNRPTFQAIRTYS 1564

 Score = 129 (50.5 bits), Expect = 1.3e-183, Sum P(7) = 1.3e-183
 Identities = 25/78 (32%), Positives = 44/78 (56%)

Query:  1599 VIAPFYPQKREEGWWVVIGDPKTNSLLSIKRLTLQ-QKAKIKLDFVA-PNPGHHSYALYF 1656
             V  P YP+ + E W++ +G    + LL++KR++++ Q+   ++ F A P  G     LY 
Sbjct:  2100 VHCPKYPKPKNEAWFLTLGSQANDELLAMKRVSIRGQRCTNRISFQATPRLGRLQLTLYL 2159

Query:  1657 MSDAYLGCDQEYKFSIDV 1674
             MSD  +G DQ+Y    ++
Sbjct:  2160 MSDCLMGFDQQYDLQFEI 2177

 Score = 128 (50.1 bits), Expect = 3.2e-95, Sum P(7) = 3.2e-95
 Identities = 32/112 (28%), Positives = 60/112 (53%)

Query:   445 EVHVPALKPKPMGPDETLVPIDKLPRYVQHAFEDFKTLNRIQSRLCKSALESDENLLLCA 504
             E H P  +  P+ P    +P+  L   V  +   F   N IQ+++      +D N+LL A
Sbjct:  1304 EHHPPLTELLPLRP----LPVSCLKNVVYESLYKFTHFNPIQTQIFHCLYHTDNNVLLGA 1359

Query:   505 PTGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNF 556
             PTG+GKT VA + + + + ++          + K++Y+AP+++LV+E + ++
Sbjct:  1360 PTGSGKTIVAEIAIFRALNQN---------PKCKVVYIAPLKALVKERIADW 1402

 Score = 93 (37.8 bits), Expect = 1.3e-183, Sum P(7) = 1.3e-183
 Identities = 19/51 (37%), Positives = 26/51 (50%)

Query:  1467 AIRLIQACVDVLSSNGWLSPAVAAMEVAQMITQAMWSKDSYLKQLPHFNAD 1517
             A R++QA VD  +  GWLS  +   ++ Q + QA W   S    LP  N D
Sbjct:  1929 ATRVMQAMVDYTAERGWLSTTLVVQQLMQSVIQARWFDGSEFLTLPGVNED 1979

 Score = 67 (28.6 bits), Expect = 8.4e-86, Sum P(6) = 8.4e-86
 Identities = 11/37 (29%), Positives = 21/37 (56%)

Query:  1491 MEVAQMITQAMWSKDSYLKQLPHFNADIIKRCTEKGV 1527
             +++ +M  +  W  D +LKQ P  NA+ I +   +G+
Sbjct:  1120 LQLCKMFERRQWDFDCHLKQFPTINAETIDKLERRGL 1156

 Score = 66 (28.3 bits), Expect = 4.7e-133, Sum P(9) = 4.7e-133
 Identities = 14/52 (26%), Positives = 32/52 (61%)

Query:   761 PRGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNF 812
             P G+GKT VA + + + + ++          + K++Y+AP+++LV+E + ++
Sbjct:  1360 PTGSGKTIVAEIAIFRALNQN---------PKCKVVYIAPLKALVKERIADW 1402

 Score = 56 (24.8 bits), Expect = 1.3e-183, Sum P(7) = 1.3e-183
 Identities = 14/56 (25%), Positives = 32/56 (57%)

Query:   276 SKIYDDAMVSQAKAGEVLNILKSAGDDRDAENQLVLLLGYDCFDFIKMLKKYRQMI 331
             +K+ D+ ++   + G++L   +S+      +N+L+ +LG+D F+ ++ L   R  I
Sbjct:   234 AKLDDEHLI--IRVGDILGSQRSS---EVLQNELMEILGFDYFELVEKLLMERDKI 284

 Score = 49 (22.3 bits), Expect = 1.3e-183, Sum P(7) = 1.3e-183
 Identities = 16/52 (30%), Positives = 27/52 (51%)

Query:   341 QSESERQKLRDTMSEDPALAKILRQLDTGKNEDGDANDS-ADARQSTSIRHQ 391
             QS  E+Q  +    E+  L +I+R +   + ED D N + A + Q   ++HQ
Sbjct:   328 QSAQEKQLSKMQRREEKKLQRIMRSIKDEEAED-DPNCAVAVSVQQLRMQHQ 378


>UNIPROTKB|E2QVY0 [details] [associations]
            symbol:ASCC3 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0043140 "ATP-dependent 3'-5' DNA helicase
            activity" evidence=IEA] [GO:0008283 "cell proliferation"
            evidence=IEA] [GO:0006307 "DNA dealkylation involved in DNA repair"
            evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00382 SMART:SM00490 GO:GO:0005524 GO:GO:0005794
            GO:GO:0006307 GO:GO:0008283 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0043140 InterPro:IPR004179
            Pfam:PF02889 SMART:SM00611 SMART:SM00973 Ensembl:ENSCAFT00000005717
            Uniprot:E2QVY0
        Length = 1925

 Score = 1005 (358.8 bits), Expect = 1.1e-179, Sum P(4) = 1.1e-179
 Identities = 196/443 (44%), Positives = 284/443 (64%)

Query:  1028 DRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQM 1087
             DR LVE+LF++ HI+VLV TATLAWGVNLPAH VIIKGTQIY  ++G +V+LG LDV+Q+
Sbjct:   790 DRNLVENLFSNGHIKVLVCTATLAWGVNLPAHAVIIKGTQIYAAKRGSFVDLGILDVMQI 849

Query:  1088 LGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMISKLPDMLNAEIVLGTVQN 1147
              GRAGRPQ+D  GEG++IT H +L +YL+LL  Q P+ESQ +  L D LNAEI LGTV N
Sbjct:   850 FGRAGRPQFDRFGEGIIITTHDKLSHYLTLLTQQNPIESQFLESLADNLNAEIALGTVTN 909

Query:  1148 LKDAVTWLGYTYLYIRMLRAPNLYGISHDALKEDPLLECHRADLIHTAALHLERSGLIKY 1207
             +++AV W+ YTYLY+RM   P +YGISH A + DP L  HR  L+      L+++ +I++
Sbjct:   910 VEEAVKWISYTYLYVRMRANPLVYGISHKAYQVDPTLAKHREQLVIEVGRKLDKARMIRF 969

Query:  1208 DRKSGHMQVTELGRIASHYYCTHETMATYNQLLKPTLSEIELFRVFSLSGEFRHITVRXX 1267
             + ++G+   T+LGR ASHYY  + T+ T+N+      +E ++F + S + EF  I VR  
Sbjct:   970 EERTGYFSSTDLGRTASHYYIKYNTIETFNEFFDAHKTESDIFAIVSKAEEFDQIKVREE 1029

Query:  1268 XXXXXXXXXXR-APIPIKESTDEPSAKVNILLQAYISQLKLEGFALMSDMVFVTQSAARL 1326
                           +      +    K+NILLQ YIS+ +++ F+L+SD  +V Q+AAR+
Sbjct:  1030 EIEELDALLNNFCELAAPGGVENSYGKINILLQTYISRGEMDSFSLISDSAYVAQNAARI 1089

Query:  1327 MRAIFEIVLYRGWAQLADKALSLCKMVDRRMWQSMSPLRQFRXXXXXXXXXXXXXNFPWE 1386
             +RA+FEI L + W  +  + L+L K++D+R+W   SPLRQF              N   +
Sbjct:  1090 VRALFEIALRKRWPAMTYRLLNLSKVIDKRLWGWASPLRQFSVLPPHILTRLEEKNLTVD 1149

Query:  1387 RLYDLGPNEIGELIRVPKLGKTIHKYVHQFPKLELATHIQPITRSTLRVELTISPDFQWD 1446
             +L D+  +EIG ++    +G  + + VHQ P + +   IQPITR+ LRV L+I PDF W+
Sbjct:  1150 KLKDMRKDEIGHMLHHVNIGLKVKQCVHQIPSVTMEASIQPITRTVLRVTLSICPDFTWN 1209

Query:  1447 EKLHGG-SEGFWILVEDVDSEAI 1468
             +++HG   E +WI VED  ++ I
Sbjct:  1210 DQVHGTVGEPWWIWVEDPTNDHI 1232

 Score = 548 (198.0 bits), Expect = 1.1e-179, Sum P(4) = 1.1e-179
 Identities = 105/215 (48%), Positives = 150/215 (69%)

Query:   815 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 874
             DE+HLLH++RGPVLE+++ART+R +E+TQ  +R++GLSATLPNY DVAT L + P  GLF
Sbjct:   611 DEVHLLHEDRGPVLESIVARTLRQVESTQSMIRILGLSATLPNYLDVATFLHVNPCIGLF 670

Query:   875 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEH--AGRNQLLVFVHSRKETG 932
             YFD  FRPV L Q ++GV     +++   M+++ YE V++   AG +Q++VFVH+R  T 
Sbjct:   671 YFDGRFRPVPLGQTFLGVKSANKVQQLNNMDEVCYESVLKQVKAG-HQVMVFVHARNATV 729

Query:   933 KTARAIRDMCLEKDTLGQFLREGSASMEVLRTEADQVKNGELRDLLPYGFAIHHAGMTRV 992
             +TA ++ +       +  FL    +       +  + +N ++R+L P GF+IHHAGM R 
Sbjct:   730 RTAMSLIERAKNSGQISCFLPSQGSEYGHAEKQVQKSRNKQVRELFPDGFSIHHAGMLRQ 789

Query:   993 DRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
             DR LVE+LF++ HI+VLV TATLAWGVNLPAH V+
Sbjct:   790 DRNLVENLFSNGHIKVLVCTATLAWGVNLPAHAVI 824

 Score = 488 (176.8 bits), Expect = 9.3e-122, Sum P(4) = 9.3e-122
 Identities = 108/301 (35%), Positives = 172/301 (57%)

Query:  1014 TLAWGVNLPAHTVV---DRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYN 1070
             TLA+G+ +  H  +   DR  VE+LF +  +QVL++T+TLAWGVN PAH VIIKGT+ Y+
Sbjct:  1611 TLAFGIGMH-HAGLHERDRKTVEELFVNCKVQVLIATSTLAWGVNFPAHLVIIKGTEYYD 1669

Query:  1071 PEKGRWVELGALDVLQMLGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMIS 1130
              +  R+V+    DVLQM+GRAGRPQ+D +G+ V++ +  +  +Y   L    PVES ++ 
Sbjct:  1670 GKTRRYVDFPITDVLQMMGRAGRPQFDDQGKAVILVHDIKKDFYKKFLYEPFPVESSLLG 1729

Query:  1131 KLPDMLNAEIVLGTVQNLKDAVTWLGYTYLYIRMLRAPNLYG---ISHDALKEDPLLECH 1187
              L D LNAEI  GT+ + +DA+ ++ +TY + R++  P+ Y    +SHD++ +       
Sbjct:  1730 VLSDHLNAEIAGGTITSKQDAMDYITWTYFFRRLIMNPSYYNLSDVSHDSVNK------F 1783

Query:  1188 RADLIHTAALHLERSGLIKYDRKSGHMQVTELGRIASHYYCTHETMATYNQLLKPTLSEI 1247
              + L+  + + LE S  I+    +  ++    GRIAS+YY  H+T+  + + LKP     
Sbjct:  1784 LSSLVEKSLVELEHSYCIEIGEDNRSIEPLTYGRIASYYYLKHQTVKMFKERLKPECGTE 1843

Query:  1248 ELFRVFSLSGEFRHITVRXXXXXXXXXXXXRAPIPIK-ESTDEPSAKVNILLQAYISQLK 1306
             EL  + S + E+  + VR              P+     S D P  K ++LLQA++S+  
Sbjct:  1844 ELLSILSDAEEYTDLPVRHNEDHMNSELAKCLPLESNPHSFDSPHTKAHLLLQAHLSRTM 1903

Query:  1307 L 1307
             L
Sbjct:  1904 L 1904

 Score = 367 (134.2 bits), Expect = 5.3e-103, Sum P(6) = 5.3e-103
 Identities = 87/215 (40%), Positives = 125/215 (58%)

Query:   815 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 874
             DEIHLL +ERGPVLE +++RT      T++ VR+VGLS  L N +D+A  L I  + GLF
Sbjct:  1453 DEIHLLGEERGPVLEVIVSRTNFISSHTEKPVRIVGLSTALANARDLADWLNIH-QMGLF 1511

Query:   875 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQLLVFVHSRKETGKT 934
              F  S RPV LE    G   +    R   MN   ++ +  H+    +L+FV SR++T  T
Sbjct:  1512 NFRPSVRPVPLEVHIQGFPGQHYCPRMASMNKPTFQAIRSHSPAKPVLIFVSSRRQTRLT 1571

Query:   935 A-RAIRDMCLEKDTLGQFLREGSASME-VLRTEADQVKNGELRDLLPYGFAIHHAGMTRV 992
             A   I  +  E+D   Q+L      ME ++ T    +++  L+  L +G  +HHAG+   
Sbjct:  1572 ALELIAFLATEEDPK-QWLNMDEREMENIIGT----LRDSNLKLTLAFGIGMHHAGLHER 1626

Query:   993 DRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
             DR  VE+LF +  +QVL++T+TLAWGVN PAH V+
Sbjct:  1627 DRKTVEELFVNCKVQVLIATSTLAWGVNFPAHLVI 1661

 Score = 327 (120.2 bits), Expect = 1.1e-179, Sum P(4) = 1.1e-179
 Identities = 84/229 (36%), Positives = 124/229 (54%)

Query:   341 QSESERQKLRDTMSEDPALAKILRQLDTGKNEDGDANDSADARQSTSIRHQMXXXXXXXX 400
             QSE E+Q ++    E+  +A+  R+   G  EDGD  +         +R Q         
Sbjct:   329 QSEQEKQLMKQYRREEKRIAR--RERKAG--EDGDIAEGLMCFDPKELRIQREQALLNAR 384

Query:   401 XXXXXTRQV-LDLEDLQF-----SSG-----SHFMSNKRCELPDGSFRKQRKGYEEVHVP 449
                  +RQ   D+E +++     S       S F++  +  LP+G  R+  K YEEV +P
Sbjct:   385 SVPILSRQRDTDVEKIRYPHVYDSQAEAMRTSAFIAGAKMILPEGIQRENNKMYEEVKIP 444

Query:   450 ALKPKPMGPDETLVPIDKLPRYVQHAFEDFKTLNRIQSRLCKSALESDENLLLCAPTGAG 509
               +P P+G +E  V I  L    Q AF+  + LNRIQS + ++A  ++EN+L+CAPTGAG
Sbjct:   445 YSEPMPIGFEEKPVYIQDLDEIGQLAFKGMRRLNRIQSIVFETAYNTNENMLICAPTGAG 504

Query:   510 KTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNFGK 558
             KTN+A+L +L EI +H    G I  +EFKI+YVAPM++L  EM   F K
Sbjct:   505 KTNIAMLTVLHEIRQHFQ-QGVIKKNEFKIVYVAPMKALAAEMTNYFSK 552

 Score = 305 (112.4 bits), Expect = 4.1e-154, Sum P(4) = 4.1e-154
 Identities = 57/111 (51%), Positives = 83/111 (74%)

Query:   559 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 618
             DE+HLLH++RGPVLE+++ART+R +E+TQ  +R++GLSATLPNY DVAT L + P  GLF
Sbjct:   611 DEVHLLHEDRGPVLESIVARTLRQVESTQSMIRILGLSATLPNYLDVATFLHVNPCIGLF 670

Query:   619 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEH--AGRNQLLV 667
             YFD  FRPV L Q ++GV     +++   M+++ YE V++   AG +Q++V
Sbjct:   671 YFDGRFRPVPLGQTFLGVKSANKVQQLNNMDEVCYESVLKQVKAG-HQVMV 720

 Score = 233 (87.1 bits), Expect = 2.5e-116, Sum P(6) = 2.5e-116
 Identities = 43/95 (45%), Positives = 67/95 (70%)

Query:   668 STLRVELTISPDFQWDEKLHGG-SEGFWILVEDVDSEVVLHHEYFL-LKSRYATDD-HVV 724
             + LRV L+I PDF W++++HG   E +WI VED  ++ + H EYFL LK +  + +  ++
Sbjct:  1194 TVLRVTLSICPDFTWNDQVHGTVGEPWWIWVEDPTNDHIYHSEYFLVLKKQVISKEAQLL 1253

Query:   725 KFFVPVFEPLPPQYFLRIVSDRWIGAETILPVSFR 759
              F +P+FEPLP QY++R VSDRW+GAE +  ++F+
Sbjct:  1254 VFTIPIFEPLPSQYYIRAVSDRWLGAEAVCIINFQ 1288

 Score = 185 (70.2 bits), Expect = 1.8e-83, Sum P(4) = 1.8e-83
 Identities = 44/109 (40%), Positives = 61/109 (55%)

Query:   559 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 618
             DEIHLL +ERGPVLE +++RT      T++ VR+VGLS  L N +D+A  L I  + GLF
Sbjct:  1453 DEIHLLGEERGPVLEVIVSRTNFISSHTEKPVRIVGLSTALANARDLADWLNIH-QMGLF 1511

Query:   619 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQLLV 667
              F  S RPV LE    G   +    R   MN   ++ +  H+    +L+
Sbjct:  1512 NFRPSVRPVPLEVHIQGFPGQHYCPRMASMNKPTFQAIRSHSPAKPVLI 1560

 Score = 147 (56.8 bits), Expect = 9.8e-161, Sum P(4) = 9.8e-161
 Identities = 29/54 (53%), Positives = 37/54 (68%)

Query:   761 PRGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNFGK 814
             P GAGKTN+A+L +L EI +H    G I  +EFKI+YVAPM++L  EM   F K
Sbjct:   500 PTGAGKTNIAMLTVLHEIRQHFQ-QGVIKKNEFKIVYVAPMKALAAEMTNYFSK 552

 Score = 109 (43.4 bits), Expect = 9.9e-61, Sum P(4) = 9.9e-61
 Identities = 28/94 (29%), Positives = 51/94 (54%)

Query:   463 VPIDKLPRYVQHAFEDFKTLNRIQSRLCKSALESDENLLLCAPTGAGKTNVALLCMLQEI 522
             +PI  L      A  +F   N +Q+++  +   +D N+LL APTG+GKT  A L + +  
Sbjct:  1308 LPITALGCEAYEALYNFSHFNPVQTQIFHTLYHTDCNVLLGAPTGSGKTVAAELAIFRVF 1367

Query:   523 GKHINADGTINADEFKIIYVAPMRSLVQEMVGNF 556
              K+  +         K +Y+AP+++LV+E + ++
Sbjct:  1368 NKYPTS---------KAVYIAPLKALVRERMDDW 1392

 Score = 88 (36.0 bits), Expect = 7.2e-80, Sum P(4) = 7.2e-80
 Identities = 43/225 (19%), Positives = 87/225 (38%)

Query:  1451 GGSEGFWILVED--VDSEAIRLIQACVDVLSSNGWLSPAVAAMEVAQMITQAMWSKDSYL 1508
             G  + F ++ +   V   A R+++A  ++     W +     + ++++I + +W   S L
Sbjct:  1068 GEMDSFSLISDSAYVAQNAARIVRALFEIALRKRWPAMTYRLLNLSKVIDKRLWGWASPL 1127

Query:  1509 KQLPHFNADIIKRCTEKGVETVFDIMXXXXXXXXXXXXXXXXXXADVARFCNRYPNIELS 1568
             +Q       I+ R  EK + TV D +                    V +  ++ P++ + 
Sbjct:  1128 RQFSVLPPHILTRLEEKNL-TV-DKLKDMRKDEIGHMLHHVNIGLKVKQCVHQIPSVTME 1185

Query:  1569 YEVLNKDRIXXXXXXXXXXXLDREDEVTGPVIAPFYPQKREEGWWVVIGDPKTNSL---- 1624
               +    R                D+V G V  P         WW+ + DP  + +    
Sbjct:  1186 ASIQPITRTVLRVTLSICPDFTWNDQVHGTVGEP---------WWIWVEDPTNDHIYHSE 1236

Query:  1625 --LSIKRLTLQQKAKIKLDFVAP--NPGHHSYALYFMSDAYLGCD 1665
               L +K+  + ++A++ L F  P   P    Y +  +SD +LG +
Sbjct:  1237 YFLVLKKQVISKEAQL-LVFTIPIFEPLPSQYYIRAVSDRWLGAE 1280

 Score = 59 (25.8 bits), Expect = 2.5e-116, Sum P(6) = 2.5e-116
 Identities = 15/52 (28%), Positives = 29/52 (55%)

Query:   761 PRGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNF 812
             P G+GKT  A L + +   K+  +         K +Y+AP+++LV+E + ++
Sbjct:  1350 PTGSGKTVAAELAIFRVFNKYPTS---------KAVYIAPLKALVRERMDDW 1392

 Score = 49 (22.3 bits), Expect = 1.1e-179, Sum P(4) = 1.1e-179
 Identities = 20/61 (32%), Positives = 35/61 (57%)

Query:   291 EVLNILKSAGDDRDAENQLVLLLGYDCFDFIKMLKKYRQMILYCTLLASSQSESERQKLR 350
             ++L  +KS GD+   +N+L  LLG D  + I+ L + R  I+   L  +S ++ + Q L+
Sbjct:   253 DMLASVKS-GDE--LQNELFELLGPDGLELIEKLLQNRITIVDRFL--NSSNDHKLQALQ 307

Query:   351 D 351
             D
Sbjct:   308 D 308

 Score = 41 (19.5 bits), Expect = 5.8e-75, Sum P(4) = 5.8e-75
 Identities = 7/28 (25%), Positives = 15/28 (53%)

Query:  1419 LELATHIQPITRSTLRVELTISPDFQWD 1446
             +EL   + P  +S  + +L ++   +WD
Sbjct:  1405 IELTGDVTPDMKSIAKADLIVTTPEKWD 1432

 Score = 39 (18.8 bits), Expect = 7.0e-40, Sum P(2) = 7.0e-40
 Identities = 10/37 (27%), Positives = 18/37 (48%)

Query:   158 ENLLGSLAEERFALLVNLGKKITDFGAEQKST-TAEE 193
             EN++G+L +    L +  G  +   G  ++   T EE
Sbjct:  1597 ENIIGTLRDSNLKLTLAFGIGMHHAGLHERDRKTVEE 1633

 Score = 38 (18.4 bits), Expect = 1.4e-159, Sum P(4) = 1.4e-159
 Identities = 10/36 (27%), Positives = 18/36 (50%)

Query:   335 TLLASSQSESERQKLRDTMSEDPALAKILRQLDTGK 370
             T L     +SE Q + + +++    AK +  +D GK
Sbjct:    52 TFLNEKLEKSEIQSVNEDLNDILQAAKQIVGIDNGK 87


>UNIPROTKB|H9KZ72 [details] [associations]
            symbol:SNRNP200 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] InterPro:IPR011545 Pfam:PF00270
            GO:GO:0005524 GO:GO:0003676 GeneTree:ENSGT00640000091272
            GO:GO:0008026 EMBL:AADN02044729 EMBL:AADN02044730
            Ensembl:ENSGALT00000005505 Uniprot:H9KZ72
        Length = 613

 Score = 1575 (559.5 bits), Expect = 3.5e-176, Sum P(3) = 3.5e-176
 Identities = 319/536 (59%), Positives = 387/536 (72%)

Query:     1 MADAAARQLQYEYKANSNLVLQADVRLIERRSRDEATGEVCSLVGKLEGTRMGDRFMRTK 60
             MAD  AR LQYEYKANSNLVLQAD  LI+R  RDE TGEV SLVGKLEGTRMGD+  RTK
Sbjct:     1 MADVTARSLQYEYKANSNLVLQADRSLIDRTRRDEPTGEVLSLVGKLEGTRMGDKAQRTK 60

Query:    61 PIKAEERKVKRQKRDEAQYDFTRMKGATLLSEGVDEMVGIIYRPKTQETRQTYEVLLSFI 120
             P   EER+ KR+KRDE ++D   MKG TLLSEG+DEMVGIIY+PKT+ TR+TYEVLLSFI
Sbjct:    61 PQMQEERRAKRRKRDEDRHDINTMKGYTLLSEGIDEMVGIIYKPKTKVTRETYEVLLSFI 120

Query:   121 QEALGDQPRDILCGAADEVLTVLKNDRMXXXXXXXXTENLLGSLAEERFALLVNLGKKIT 180
             Q ALGDQPRDILCGAADEVL VLKN+++         + LLG   + R+ +LVNLGKKIT
Sbjct:   121 QAALGDQPRDILCGAADEVLAVLKNEKLRDKERRKEIDLLLGQTDDTRYHVLVNLGKKIT 180

Query:   181 DFGAEQKSTTAEENIDDTYGINVQFXXXXXXXXXXTFXXXXXXXXXXXXXXXXXXNTAIH 240
             D+G +++    ++NID+TYG+NVQF           +                       
Sbjct:   181 DYGGDKEIQNMDDNIDETYGVNVQFESDEEEGDEDIYGEVRDEASDDDMEGDEAVVRCTL 240

Query:   241 AENL-AGGEDAEGTGRKKDKSLHPLDIDAYWLQRRLSKIYDDAMVSQAKAGEVLNILKSA 299
             + NL A GE    + +KKD  LHP DIDA+WLQR+LS+ YDDA+VSQ KA EVL ILK+A
Sbjct:   241 SANLVASGELM--SSKKKD--LHPRDIDAFWLQRQLSRFYDDAIVSQKKADEVLEILKTA 296

Query:   300 GDDRDAENQLVLLLGYDCFDFIKMLKKYRQMILYCTLLASSQSESERQKLRDTMSEDPAL 359
              DDR+ ENQLVLLLG++ FDFIK+L+++R MILYCTLLAS+QSE+E++++   M  DP L
Sbjct:   297 SDDRECENQLVLLLGFNTFDFIKVLRQHRMMILYCTLLASAQSEAEKERIMGKMEADPEL 356

Query:   360 AKILRQLDTGKNED--GDANDSADARQSTSIRHQMXXXXXXXXXXXXXTRQVLDLEDLQF 417
             +K L QL   + ED   +     +  + + +   +              RQVLDLEDL F
Sbjct:   357 SKFLYQLHETEKEDLIREERSRRERVRQSRMDTDLETMDLDQGGEALAPRQVLDLEDLVF 416

Query:   418 SSGSHFMSNKRCELPDGSFRKQRKGYEEVHVPALKPKPMGPDETLVPIDKLPRYVQHAFE 477
             + GSHFM+NKRC+LPDGSFR+QRKGYEEVHVPALKPKP G +E LV ++KLP+Y Q  FE
Sbjct:   417 AQGSHFMANKRCQLPDGSFRRQRKGYEEVHVPALKPKPFGSEEQLVSVEKLPKYAQAGFE 476

Query:   478 DFKTLNRIQSRLCKSALESDENLLLCAPTGAGKTNVALLCMLQEIGKHINADGTIN 533
              FKTLNRIQS+L ++ALESDENLLLCAPTGAGKTNVAL+CML+EIGKHIN DGTIN
Sbjct:   477 GFKTLNRIQSKLYRAALESDENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTIN 532

 Score = 135 (52.6 bits), Expect = 3.5e-176, Sum P(3) = 3.5e-176
 Identities = 25/29 (86%), Positives = 27/29 (93%)

Query:   761 PRGAGKTNVALLCMLQEIGKHINADGTIN 789
             P GAGKTNVAL+CML+EIGKHIN DGTIN
Sbjct:   504 PTGAGKTNVALMCMLREIGKHINMDGTIN 532

 Score = 39 (18.8 bits), Expect = 3.5e-176, Sum P(3) = 3.5e-176
 Identities = 5/13 (38%), Positives = 9/13 (69%)

Query:  1219 LGRIASHYYCTHE 1231
             + R+  + +CTHE
Sbjct:   531 INRVQDYLHCTHE 543


>MGI|MGI:1925237 [details] [associations]
            symbol:Ascc3 "activating signal cointegrator 1 complex
            subunit 3" species:10090 "Mus musculus" [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006200
            "ATP catabolic process" evidence=ISO] [GO:0006281 "DNA repair"
            evidence=IEA] [GO:0006307 "DNA dealkylation involved in DNA repair"
            evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0006974 "response to DNA damage
            stimulus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0008283 "cell proliferation"
            evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
            [GO:0032508 "DNA duplex unwinding" evidence=ISO] [GO:0043140
            "ATP-dependent 3'-5' DNA helicase activity" evidence=ISO]
            InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00382
            SMART:SM00490 MGI:MGI:1925237 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005794 GO:GO:0006355 GO:GO:0006307 GO:GO:0008283
            GO:GO:0006351 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 CTD:10973 GeneTree:ENSGT00700000104562 KO:K01529
            OMA:FPGKHYC GO:GO:0043140 InterPro:IPR004179 Pfam:PF02889
            SMART:SM00611 SMART:SM00973 EMBL:AC137877 EMBL:AC153529
            EMBL:AC159114 EMBL:BC032189 EMBL:BC059917 EMBL:AK021027
            EMBL:AK052745 IPI:IPI00553687 RefSeq:NP_932124.2 UniGene:Mm.222497
            PRIDE:E9PZJ8 Ensembl:ENSMUST00000035606 GeneID:77987 KEGG:mmu:77987
            HOGENOM:HOG000157749 NextBio:347945 Bgee:E9PZJ8 Uniprot:E9PZJ8
        Length = 2198

 Score = 1005 (358.8 bits), Expect = 6.3e-170, Sum P(7) = 6.3e-170
 Identities = 211/526 (40%), Positives = 315/526 (59%)

Query:   951 FLREGSASMEVLRTEADQVKN-GELRDLLP-----YGFAIHHAGMTRVDRTLVEDLFADR 1004
             F+   +A++    +  ++ KN G++   LP     YG A+     +R  +  V +LF+D 
Sbjct:   722 FVHARNATVRTAMSLIERAKNSGQISCFLPTEGPEYGHALKQVQKSRNKQ--VRELFSD- 778

Query:  1005 HIQVLVSTATLAWGVNLPAHTVVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIK 1064
                         + ++       DR LVE+LF++ HI+VLV TATLAWGVNLPAH V+IK
Sbjct:   779 -----------GFSIHHAGMLRQDRNLVENLFSNGHIKVLVCTATLAWGVNLPAHAVVIK 827

Query:  1065 GTQIYNPEKGRWVELGALDVLQMLGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPV 1124
             GTQIY  ++G +V+LG LDV+Q+ GRAGRPQ+D  GEG++IT H +L +YLSLL  Q P+
Sbjct:   828 GTQIYAAKRGSFVDLGILDVMQIFGRAGRPQFDKFGEGIIITTHDKLSHYLSLLTQQNPI 887

Query:  1125 ESQMISKLPDMLNAEIVLGTVQNLKDAVTWLGYTYLYIRMLRAPNLYGISHDALKEDPLL 1184
             ESQ +  L D LNAEI LGTV N+++AV W+ YTYLY+RM   P  YGISH A + DP L
Sbjct:   888 ESQFLESLADNLNAEIALGTVTNVEEAVRWMSYTYLYVRMRANPLAYGISHKAYQIDPTL 947

Query:  1185 ECHRADLIHTAALHLERSGLIKYDRKSGHMQVTELGRIASHYYCTHETMATYNQLLKPTL 1244
               HR  L+      L+++ +I+++ ++G+   T+LGR ASH+Y  + T+ T+N+L     
Sbjct:   948 RKHREQLLIEVGQKLDKAKMIRFEERTGYFSSTDLGRTASHFYIKYNTIETFNELFDAHK 1007

Query:  1245 SEIELFRVFSLSGEFRHITVRXXXXXXXXXXXXR-APIPIKESTDEPSAKVNILLQAYIS 1303
             +E ++F + S + EF  I VR                +      +    K+NILLQ YIS
Sbjct:  1008 TEGDIFAIVSKAEEFDQIKVREEEIEELDALLNNFCELSAPGGVENSYGKINILLQTYIS 1067

Query:  1304 QLKLEGFALMSDMVFVTQSAARLMRAIFEIVLYRGWAQLADKALSLCKMVDRRMWQSMSP 1363
             + +++ F+L+SD  +V Q+AAR++RA+FEI L + W  +  + L+L K++D+R+W   SP
Sbjct:  1068 RGEMDSFSLISDSAYVAQNAARIVRALFEIALRKRWPTMTYRLLNLSKVIDKRLWGWASP 1127

Query:  1364 LRQFRXXXXXXXXXXXXXNFPWERLYDLGPNEIGELIRVPKLGKTIHKYVHQFPKLELAT 1423
             LRQF              N   ++L D+  +EIG ++    +G  + + VHQ P + +  
Sbjct:  1128 LRQFSVLPPHILTRLEEKNLTVDKLKDMRKDEIGHILHHVNIGLKVKQCVHQIPSVTMEA 1187

Query:  1424 HIQPITRSTLRVELTISPDFQWDEKLHGG-SEGFWILVEDVDSEAI 1468
              IQPITR+ LRV L I PDF W++++HG   E +WI VED  ++ I
Sbjct:  1188 SIQPITRTVLRVSLNIHPDFSWNDQVHGTVGEPWWIWVEDPTNDHI 1233

 Score = 545 (196.9 bits), Expect = 4.6e-134, Sum P(5) = 4.6e-134
 Identities = 107/216 (49%), Positives = 152/216 (70%)

Query:   815 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 874
             DE+HLLH++RGPVLE+++ART+R +E+TQ  +R++GLSATLPNY DVAT L + P  GLF
Sbjct:   612 DEVHLLHEDRGPVLESIVARTLRQVESTQSMIRILGLSATLPNYLDVATFLHVNPYIGLF 671

Query:   875 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEH--AGRNQLLVFVHSRKETG 932
             YFD  FRPV L Q ++G+     +++   M+++ YE V++   AG +Q++VFVH+R  T 
Sbjct:   672 YFDGRFRPVPLGQTFLGIKSTNKMQQLNNMDEVCYESVLKQVKAG-HQVMVFVHARNATV 730

Query:   933 KTARAIRDMCLEKDTLGQFL-REGSASMEVLRTEADQVKNGELRDLLPYGFAIHHAGMTR 991
             +TA ++ +       +  FL  EG      L+ +  + +N ++R+L   GF+IHHAGM R
Sbjct:   731 RTAMSLIERAKNSGQISCFLPTEGPEYGHALK-QVQKSRNKQVRELFSDGFSIHHAGMLR 789

Query:   992 VDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
              DR LVE+LF++ HI+VLV TATLAWGVNLPAH VV
Sbjct:   790 QDRNLVENLFSNGHIKVLVCTATLAWGVNLPAHAVV 825

 Score = 523 (189.2 bits), Expect = 4.2e-164, Sum P(8) = 4.2e-164
 Identities = 122/355 (34%), Positives = 194/355 (54%)

Query:  1014 TLAWGVNLPAHTVV---DRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYN 1070
             TLA+G+ +  H  +   DR  VE+LF +  +QVL++T+TLAWGVN PAH VIIKGT+ Y+
Sbjct:  1612 TLAFGIGMH-HAGLHERDRKTVEELFVNCKVQVLIATSTLAWGVNFPAHLVIIKGTEYYD 1670

Query:  1071 PEKGRWVELGALDVLQMLGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMIS 1130
              +  R+V+    DVLQM+GRAGRPQ+D +G+ V++ +  +  +Y   L    PVES ++ 
Sbjct:  1671 GKTRRYVDFPITDVLQMMGRAGRPQFDDQGKAVILVHDIKKDFYKKFLYEPFPVESSLLG 1730

Query:  1131 KLPDMLNAEIVLGTVQNLKDAVTWLGYTYLYIRMLRAPNLYGISHDALKEDPLLECHRAD 1190
              L D LNAEI  GT+ + +DA+ ++ +TY + R++  P+ Y +    + +D + +   + 
Sbjct:  1731 VLSDHLNAEIAGGTITSKQDAMDYITWTYFFRRLIMNPSYYSLGD--VSQDSINK-FLSH 1787

Query:  1191 LIHTAALHLERSGLIKYDRKSGHMQVTELGRIASHYYCTHETMATYNQLLKPTLSEIELF 1250
             LI  + + LE S  I+    +  ++    GRIAS+YY  H+T+  +   LKP  S  EL 
Sbjct:  1788 LIGQSLVELELSHCIEVGEDNRTIEPLTCGRIASYYYLKHKTVKMFKDRLKPECSTEELL 1847

Query:  1251 RVFSLSGEFRHITVRXXXXXXXXXXXXRAPIPIK-ESTDEPSAKVNILLQAYISQLKLEG 1309
              + S + E+  + VR              PI +   S D P  K ++LLQA++S+  L  
Sbjct:  1848 SILSDAEEYTDLPVRHNEDHTNNELAKCLPIELNPHSFDSPHTKAHLLLQAHLSRAMLPC 1907

Query:  1310 FALMSDMVFVTQSAARLMRAIFEIVLYRGWAQLADKALSLCKMVDRRMWQSMSPL 1364
                 +D   V   A R+ +A+ ++   +GW         L +MV +  W   S L
Sbjct:  1908 PDYDTDTKTVLDQALRVCQAMLDVAASQGWLVTVLNITHLIQMVIQGRWLKDSSL 1962

 Score = 377 (137.8 bits), Expect = 4.2e-164, Sum P(8) = 4.2e-164
 Identities = 93/228 (40%), Positives = 132/228 (57%)

Query:   802 RSLVQEMVGNFGKDEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDV 861
             RS VQ+ V     DEIHLL +ERGPVLE +++RT      T++ VR+VGLS  L N +D+
Sbjct:  1442 RSYVQQ-VNILIIDEIHLLGEERGPVLEVIVSRTNFISSHTEKPVRIVGLSTALANARDL 1500

Query:   862 ATLLRIKPETGLFYFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQL 921
             A  L IK + GLF F  S RPV LE    G   +    R   MN   ++ +  H+    +
Sbjct:  1501 ADWLNIK-QMGLFNFRPSVRPVPLEVHIQGFPGQHYCPRMASMNKPAFQAIRSHSPAKPV 1559

Query:   922 LVFVHSRKETGKTA-RAIRDMCLEKDTLGQFLREGSASME-VLRTEADQVKNGELRDLLP 979
             L+FV SR++T  TA   I  +  E+D   Q+L      M+ ++ T    V++  L+  L 
Sbjct:  1560 LIFVSSRRQTRLTALELIAFLATEEDPK-QWLNMDEQEMDNIIGT----VRDSNLKLTLA 1614

Query:   980 YGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
             +G  +HHAG+   DR  VE+LF +  +QVL++T+TLAWGVN PAH V+
Sbjct:  1615 FGIGMHHAGLHERDRKTVEELFVNCKVQVLIATSTLAWGVNFPAHLVI 1662

 Score = 311 (114.5 bits), Expect = 6.3e-170, Sum P(7) = 6.3e-170
 Identities = 82/230 (35%), Positives = 124/230 (53%)

Query:   341 QSESERQKLRDTMSEDPALAKILRQLDTGKNEDGDAN-DSADARQSTSIRHQMXXXXXXX 399
             QSE E+Q ++    E+  +A+  R+   G  EDG+ + +         +R Q        
Sbjct:   329 QSEQEKQLMKQYRREEKRIAR--REKKAG--EDGEVSGEGVLPFDPKELRIQREHALLNA 384

Query:   400 XXXXXXTRQV-LDLEDLQFS----------SGSHFMSNKRCELPDGSFRKQRKGYEEVHV 448
                    RQ  ++ E +++             S F++  +  LP+G  R+  K YEEV +
Sbjct:   385 RNAPILGRQRDVEFEKIRYPHVYDSQAQARETSAFIAGAKMILPEGIQRENTKLYEEVRI 444

Query:   449 PALKPKPMGPDETLVPIDKLPRYVQHAFEDFKTLNRIQSRLCKSALESDENLLLCAPTGA 508
             P  +P P+G +E  V I  L    Q AF+  K LNRIQS + ++A  ++EN+L+CAPTGA
Sbjct:   445 PYGEPMPVGFEEKPVYIKDLDEVGQLAFKGMKRLNRIQSIVFETAYNTNENMLICAPTGA 504

Query:   509 GKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNFGK 558
             GKTN+A+L +L EI +H +  G I  +EFKI+YVAPM++L  EM   F K
Sbjct:   505 GKTNIAMLTILHEIRQHFH-QGVIKKNEFKIVYVAPMKALAAEMTNYFSK 553

 Score = 307 (113.1 bits), Expect = 6.3e-170, Sum P(7) = 6.3e-170
 Identities = 56/111 (50%), Positives = 83/111 (74%)

Query:   559 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 618
             DE+HLLH++RGPVLE+++ART+R +E+TQ  +R++GLSATLPNY DVAT L + P  GLF
Sbjct:   612 DEVHLLHEDRGPVLESIVARTLRQVESTQSMIRILGLSATLPNYLDVATFLHVNPYIGLF 671

Query:   619 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEH--AGRNQLLV 667
             YFD  FRPV L Q ++G+     +++   M+++ YE V++   AG +Q++V
Sbjct:   672 YFDGRFRPVPLGQTFLGIKSTNKMQQLNNMDEVCYESVLKQVKAG-HQVMV 721

 Score = 233 (87.1 bits), Expect = 4.2e-164, Sum P(8) = 4.2e-164
 Identities = 43/95 (45%), Positives = 65/95 (68%)

Query:   668 STLRVELTISPDFQWDEKLHGG-SEGFWILVEDVDSEVVLHHEYFL-LKSRYATDD-HVV 724
             + LRV L I PDF W++++HG   E +WI VED  ++ + H EYFL LK +    +  ++
Sbjct:  1195 TVLRVSLNIHPDFSWNDQVHGTVGEPWWIWVEDPTNDHIYHSEYFLALKKQVINKEAQLL 1254

Query:   725 KFFVPVFEPLPPQYFLRIVSDRWIGAETILPVSFR 759
              F +P+FEPLP QY++R VSDRW+GAE +  ++F+
Sbjct:  1255 VFTIPIFEPLPSQYYIRAVSDRWLGAEAVCIINFQ 1289

 Score = 195 (73.7 bits), Expect = 2.2e-97, Sum P(5) = 2.2e-97
 Identities = 50/122 (40%), Positives = 68/122 (55%)

Query:   546 RSLVQEMVGNFGKDEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDV 605
             RS VQ+ V     DEIHLL +ERGPVLE +++RT      T++ VR+VGLS  L N +D+
Sbjct:  1442 RSYVQQ-VNILIIDEIHLLGEERGPVLEVIVSRTNFISSHTEKPVRIVGLSTALANARDL 1500

Query:   606 ATLLRIKPETGLFYFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQL 665
             A  L IK + GLF F  S RPV LE    G   +    R   MN   ++ +  H+    +
Sbjct:  1501 ADWLNIK-QMGLFNFRPSVRPVPLEVHIQGFPGQHYCPRMASMNKPAFQAIRSHSPAKPV 1559

Query:   666 LV 667
             L+
Sbjct:  1560 LI 1561

 Score = 150 (57.9 bits), Expect = 6.3e-170, Sum P(7) = 6.3e-170
 Identities = 29/90 (32%), Positives = 53/90 (58%)

Query:  1600 IAPFYPQKREEGWWVVIGDPKTNSLLSIKRLT-LQQKAKIKLDFVAPN-PGHHSYALYFM 1657
             + P +P+ ++EGW++++G+     L+++KR+  ++      + F  P  PG + + LY M
Sbjct:  2104 VTPRFPKLKDEGWFLILGEVDKRELMAVKRVGFVRTHHDASISFFTPETPGRYIFTLYLM 2163

Query:  1658 SDAYLGCDQEYKFSIDVSEYYSGGESDSDV 1687
             SD YLG DQ+Y   ++V +  +    DSDV
Sbjct:  2164 SDCYLGLDQQYDIYLNVIKA-NISTKDSDV 2192

 Score = 148 (57.2 bits), Expect = 5.6e-125, Sum P(6) = 5.6e-125
 Identities = 29/54 (53%), Positives = 38/54 (70%)

Query:   761 PRGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNFGK 814
             P GAGKTN+A+L +L EI +H +  G I  +EFKI+YVAPM++L  EM   F K
Sbjct:   501 PTGAGKTNIAMLTILHEIRQHFH-QGVIKKNEFKIVYVAPMKALAAEMTNYFSK 553

 Score = 109 (43.4 bits), Expect = 2.7e-95, Sum P(5) = 2.7e-95
 Identities = 28/94 (29%), Positives = 51/94 (54%)

Query:   463 VPIDKLPRYVQHAFEDFKTLNRIQSRLCKSALESDENLLLCAPTGAGKTNVALLCMLQEI 522
             +PI  L      A  +F   N +Q+++  +   +D N+LL APTG+GKT  A L + +  
Sbjct:  1309 LPITALGCKAYEALYNFSHFNPVQTQIFHTLYHTDCNVLLGAPTGSGKTVAAELAIFRVF 1368

Query:   523 GKHINADGTINADEFKIIYVAPMRSLVQEMVGNF 556
              K+  +         K +Y+AP+++LV+E + ++
Sbjct:  1369 NKYPTS---------KAVYIAPLKALVRERMDDW 1393

 Score = 100 (40.3 bits), Expect = 6.3e-170, Sum P(7) = 6.3e-170
 Identities = 19/48 (39%), Positives = 29/48 (60%)

Query:  1466 EAIRLIQACVDVLSSNGWLSPAVAAMEVAQMITQAMWSKDSYLKQLPH 1513
             +A+R+ QA +DV +S GWL   +    + QM+ Q  W KDS L  +P+
Sbjct:  1920 QALRVCQAMLDVAASQGWLVTVLNITHLIQMVIQGRWLKDSSLLTIPN 1967

 Score = 92 (37.4 bits), Expect = 1.5e-78, Sum P(4) = 1.5e-78
 Identities = 43/225 (19%), Positives = 88/225 (39%)

Query:  1451 GGSEGFWILVED--VDSEAIRLIQACVDVLSSNGWLSPAVAAMEVAQMITQAMWSKDSYL 1508
             G  + F ++ +   V   A R+++A  ++     W +     + ++++I + +W   S L
Sbjct:  1069 GEMDSFSLISDSAYVAQNAARIVRALFEIALRKRWPTMTYRLLNLSKVIDKRLWGWASPL 1128

Query:  1509 KQLPHFNADIIKRCTEKGVETVFDIMXXXXXXXXXXXXXXXXXXADVARFCNRYPNIELS 1568
             +Q       I+ R  EK + TV D +                    V +  ++ P++ + 
Sbjct:  1129 RQFSVLPPHILTRLEEKNL-TV-DKLKDMRKDEIGHILHHVNIGLKVKQCVHQIPSVTME 1186

Query:  1569 YEVLNKDRIXXXXXXXXXXXLDREDEVTGPVIAPFYPQKREEGWWVVIGDPKTNSL---- 1624
               +    R                D+V G V  P         WW+ + DP  + +    
Sbjct:  1187 ASIQPITRTVLRVSLNIHPDFSWNDQVHGTVGEP---------WWIWVEDPTNDHIYHSE 1237

Query:  1625 --LSIKRLTLQQKAKIKLDFVAP--NPGHHSYALYFMSDAYLGCD 1665
               L++K+  + ++A++ L F  P   P    Y +  +SD +LG +
Sbjct:  1238 YFLALKKQVINKEAQL-LVFTIPIFEPLPSQYYIRAVSDRWLGAE 1281

 Score = 59 (25.8 bits), Expect = 4.2e-164, Sum P(8) = 4.2e-164
 Identities = 15/52 (28%), Positives = 29/52 (55%)

Query:   761 PRGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNF 812
             P G+GKT  A L + +   K+  +         K +Y+AP+++LV+E + ++
Sbjct:  1351 PTGSGKTVAAELAIFRVFNKYPTS---------KAVYIAPLKALVRERMDDW 1393

 Score = 55 (24.4 bits), Expect = 6.3e-170, Sum P(7) = 6.3e-170
 Identities = 26/97 (26%), Positives = 49/97 (50%)

Query:   256 KKDKSLHPLDIDAYWLQRRLSKIYDDAMVSQAKAGEVLNILKSAGDDRDAENQLVLLLGY 315
             K + SL   +++ Y L   L ++ + A V       + ++L SA    + +++L  LLG 
Sbjct:   217 KTNGSLLWCEVEKY-LNATLKEMTEAARVEDLCC-TLYDMLASAKSGDELQDELFELLGP 274

Query:   316 DCFDFIKMLKKYRQMILYCTLLASSQSESERQKLRDT 352
             +  D I+ L + R  I+   L  +S S+ + Q L+D+
Sbjct:   275 EGLDLIEKLLQNRITIVDRFL--NSSSDHKFQVLQDS 309

 Score = 50 (22.7 bits), Expect = 6.3e-10, Sum P(3) = 6.3e-10
 Identities = 10/36 (27%), Positives = 20/36 (55%)

Query:   269 YWLQRRLSKIYDDAMVSQAKAGEVLNILKSAGDDRD 304
             Y+L+ +  K++ D +  +    E+L+IL  A +  D
Sbjct:  1823 YYLKHKTVKMFKDRLKPECSTEELLSILSDAEEYTD 1858

 Score = 41 (19.5 bits), Expect = 6.3e-170, Sum P(7) = 6.3e-170
 Identities = 7/28 (25%), Positives = 15/28 (53%)

Query:  1419 LELATHIQPITRSTLRVELTISPDFQWD 1446
             +EL   + P  +S  + +L ++   +WD
Sbjct:  1406 IELTGDVTPDMKSIAKADLIVTTPEKWD 1433

 Score = 40 (19.1 bits), Expect = 0.00019, Sum P(3) = 0.00019
 Identities = 8/37 (21%), Positives = 19/37 (51%)

Query:   459 DETLVPIDKLPRYVQHAFEDFKTLNRIQSRLCKSALE 495
             D +L+ I  + ++  H F  +K   +     C++++E
Sbjct:  1959 DSSLLTIPNIEQHHLHLFRKWKPPVKSSHAKCRTSIE 1995


>RGD|1307995 [details] [associations]
            symbol:Ascc3 "activating signal cointegrator 1 complex subunit
            3" species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0006307 "DNA dealkylation involved in DNA repair"
            evidence=ISS] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0008283 "cell proliferation"
            evidence=ISS] [GO:0032508 "DNA duplex unwinding" evidence=ISS]
            [GO:0043140 "ATP-dependent 3'-5' DNA helicase activity"
            evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00382 SMART:SM00490 RGD:1307995 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005794 GO:GO:0006355 GO:GO:0006307 GO:GO:0008283
            GO:GO:0006351 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0043140 InterPro:IPR004179 Pfam:PF02889
            SMART:SM00611 SMART:SM00973 IPI:IPI01016410 UniGene:Rn.24209
            Ensembl:ENSRNOT00000057016 UCSC:RGD:1307995
            GeneTree:ENSGT00640000091272 ArrayExpress:F1LPQ2 Uniprot:F1LPQ2
        Length = 2197

 Score = 1010 (360.6 bits), Expect = 1.2e-169, Sum P(7) = 1.2e-169
 Identities = 213/526 (40%), Positives = 315/526 (59%)

Query:   951 FLREGSASMEVLRTEADQVKN-GELRDLLP-----YGFAIHHAGMTRVDRTLVEDLFADR 1004
             F+   +A++    +  ++ KN G++   LP     YG A+     +R  +  V +LF+D 
Sbjct:   722 FVHARNATVRTAMSLIERAKNSGQISCFLPTQGPEYGHALKQVQKSRNKQ--VRELFSD- 778

Query:  1005 HIQVLVSTATLAWGVNLPAHTVVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIK 1064
                         + ++       DR LVE+LF++ HI+VLV TATLAWGVNLPAH VIIK
Sbjct:   779 -----------GFSIHHAGMLRQDRNLVENLFSNGHIKVLVCTATLAWGVNLPAHAVIIK 827

Query:  1065 GTQIYNPEKGRWVELGALDVLQMLGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPV 1124
             GTQIY  ++G +V+LG LDV+Q+ GRAGRPQ+D  GEG++IT H +L +YLSLL  Q P+
Sbjct:   828 GTQIYAAKRGSFVDLGILDVMQIFGRAGRPQFDKFGEGIIITTHDKLSHYLSLLTQQNPI 887

Query:  1125 ESQMISKLPDMLNAEIVLGTVQNLKDAVTWLGYTYLYIRMLRAPNLYGISHDALKEDPLL 1184
             ESQ +  L D LNAEI LGTV N+++AV W+ YTYLY+RM   P  YGISH A + DP L
Sbjct:   888 ESQFLESLADNLNAEIALGTVTNVEEAVKWMSYTYLYVRMRANPLAYGISHKAYQMDPTL 947

Query:  1185 ECHRADLIHTAALHLERSGLIKYDRKSGHMQVTELGRIASHYYCTHETMATYNQLLKPTL 1244
               HR  L+      L+++ +I+++ ++G+   T+LGR ASHYY  + T+ T+N+L     
Sbjct:   948 RKHREQLLIEVGQKLDKARMIRFEERTGYFSSTDLGRTASHYYIKYNTIETFNELFDAHK 1007

Query:  1245 SEIELFRVFSLSGEFRHITVRXXXXXXXXXXXXR-APIPIKESTDEPSAKVNILLQAYIS 1303
             +E ++F + S + EF  I VR                +      +    K+NILLQ YIS
Sbjct:  1008 TEGDIFAIVSKAEEFDQIKVREEEIEELDALLNNFCELSAPGGVENSYGKINILLQTYIS 1067

Query:  1304 QLKLEGFALMSDMVFVTQSAARLMRAIFEIVLYRGWAQLADKALSLCKMVDRRMWQSMSP 1363
             + +++ F+L+SD  +V Q+AAR++RA+FEI L + W  +  + L+L K++D+R+W   SP
Sbjct:  1068 RGEMDSFSLISDSAYVAQNAARIVRALFEIALRKRWPTMTYRLLNLSKVIDKRLWGWASP 1127

Query:  1364 LRQFRXXXXXXXXXXXXXNFPWERLYDLGPNEIGELIRVPKLGKTIHKYVHQFPKLELAT 1423
             LRQF              N   ++L D+  +EIG ++    +G  + + VHQ P + +  
Sbjct:  1128 LRQFSVLPPHILTRLEEKNLTVDKLKDMRKDEIGHILHHVNIGLKVKQCVHQIPSVTMEA 1187

Query:  1424 HIQPITRSTLRVELTISPDFQWDEKLHGG-SEGFWILVEDVDSEAI 1468
              IQPITR+ LRV L I PDF W++++HG   E +WI VED  ++ I
Sbjct:  1188 SIQPITRTVLRVSLNIYPDFSWNDQVHGTVGEPWWIWVEDPTNDHI 1233

 Score = 541 (195.5 bits), Expect = 8.6e-133, Sum P(5) = 8.6e-133
 Identities = 105/216 (48%), Positives = 152/216 (70%)

Query:   815 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 874
             DE+HLLH++RGPVLE+++ART+R +E+TQ  +R++GLSATLPNY DVAT L + P  GLF
Sbjct:   612 DEVHLLHEDRGPVLESIVARTLRQVESTQSMIRILGLSATLPNYLDVATFLHVNPYIGLF 671

Query:   875 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEH--AGRNQLLVFVHSRKETG 932
             YFD  FRPV L Q ++G+     +++   M+++ YE V++   AG +Q++VFVH+R  T 
Sbjct:   672 YFDGRFRPVPLGQTFLGIKSANKMQQLNNMDEVCYESVLKQVKAG-HQVMVFVHARNATV 730

Query:   933 KTARAIRDMCLEKDTLGQFL-REGSASMEVLRTEADQVKNGELRDLLPYGFAIHHAGMTR 991
             +TA ++ +       +  FL  +G      L+ +  + +N ++R+L   GF+IHHAGM R
Sbjct:   731 RTAMSLIERAKNSGQISCFLPTQGPEYGHALK-QVQKSRNKQVRELFSDGFSIHHAGMLR 789

Query:   992 VDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
              DR LVE+LF++ HI+VLV TATLAWGVNLPAH V+
Sbjct:   790 QDRNLVENLFSNGHIKVLVCTATLAWGVNLPAHAVI 825

 Score = 524 (189.5 bits), Expect = 6.5e-159, Sum P(8) = 6.5e-159
 Identities = 122/355 (34%), Positives = 194/355 (54%)

Query:  1014 TLAWGVNLPAHTVV---DRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYN 1070
             TLA+G+ +  H  +   DR  VE+LF +  +QVL++T+TLAWGVN PAH VIIKGT+ Y+
Sbjct:  1611 TLAFGIGMH-HAGLHERDRKTVEELFVNCKVQVLIATSTLAWGVNFPAHLVIIKGTEYYD 1669

Query:  1071 PEKGRWVELGALDVLQMLGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMIS 1130
              +  R+V+    DVLQM+GRAGRPQ+D +G+ V++ +  +  +Y   L    PVES ++ 
Sbjct:  1670 GKTRRYVDFPITDVLQMMGRAGRPQFDDQGKAVILVHDIKKDFYKKFLYEPFPVESSLLG 1729

Query:  1131 KLPDMLNAEIVLGTVQNLKDAVTWLGYTYLYIRMLRAPNLYGISHDALKEDPLLECHRAD 1190
              L D LNAEI  GT+ + +DA+ ++ +TY + R++  P+ Y +    + +D + +   + 
Sbjct:  1730 VLSDHLNAEIAGGTITSKQDALDYITWTYFFRRLIMNPSYYNLGD--VSQDAINK-FLSH 1786

Query:  1191 LIHTAALHLERSGLIKYDRKSGHMQVTELGRIASHYYCTHETMATYNQLLKPTLSEIELF 1250
             LI  + + LE S  I+    +  ++    GRIAS+YY  H+T+  +   LKP  S  EL 
Sbjct:  1787 LIGQSLVELELSHCIEVGEDNRSIEPLTCGRIASYYYLKHKTVKMFKDRLKPECSTEELL 1846

Query:  1251 RVFSLSGEFRHITVRXXXXXXXXXXXXRAPIPIK-ESTDEPSAKVNILLQAYISQLKLEG 1309
              + S + E+  + VR              PI +   S D P  K ++LLQA++S+  L  
Sbjct:  1847 SILSDAEEYTDLPVRHNEDHTNNELAKCLPIELNPHSFDSPHTKAHLLLQAHLSRAMLPC 1906

Query:  1310 FALMSDMVFVTQSAARLMRAIFEIVLYRGWAQLADKALSLCKMVDRRMWQSMSPL 1364
                 +D   V   A R+ +A+ ++   +GW         L +MV +  W   S L
Sbjct:  1907 PDYDTDTKTVLDQALRVCQAMLDVAASQGWLVTTLNITHLIQMVIQGRWLKDSSL 1961

 Score = 336 (123.3 bits), Expect = 6.5e-159, Sum P(8) = 6.5e-159
 Identities = 87/227 (38%), Positives = 122/227 (53%)

Query:   802 RSLVQEMVGNFGKDEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDV 861
             RS VQ+ V     DEIHLL +ERGPVLE +++RT      T++ VR+VGLS  L N +D+
Sbjct:  1442 RSYVQQ-VNILIIDEIHLLGEERGPVLEVIVSRTNFISSHTEKPVRIVGLSTALANARDL 1500

Query:   862 ATLLRIKPETGLFYFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQL 921
             A  L IK + GLF F  S RPV LE    G   +    R   MN   +++   H      
Sbjct:  1501 ADWLNIK-QMGLFNFRPSVRPVPLEVHIQGFPGQHYCPRMASMNKPAFQESHTHCPDRPC 1559

Query:   922 LVFVHSRKETGKTARAIRDMCLEKDTLGQFLREGSASME-VLRTEADQVKNGELRDLLPY 980
             L+       +      I  +  E+D   Q+L      ME ++ T    V++  L+  L +
Sbjct:  1560 LLLPERMLSSMTKLELIAFLATEEDPK-QWLNMDEQEMENIIAT----VRDSNLKLTLAF 1614

Query:   981 GFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
             G  +HHAG+   DR  VE+LF +  +QVL++T+TLAWGVN PAH V+
Sbjct:  1615 GIGMHHAGLHERDRKTVEELFVNCKVQVLIATSTLAWGVNFPAHLVI 1661

 Score = 311 (114.5 bits), Expect = 1.2e-169, Sum P(7) = 1.2e-169
 Identities = 82/230 (35%), Positives = 124/230 (53%)

Query:   341 QSESERQKLRDTMSEDPALAKILRQLDTGKNEDGDANDSA----DARQSTSIR-HQMXXX 395
             QSE E+Q ++    E+  +A+  R+   G  EDG+ +       D ++    R H +   
Sbjct:   329 QSEQEKQLMKQYRREEKRIAR--REKKAG--EDGEVSGEGLLPFDPKELRLQREHALLNA 384

Query:   396 XXXXXXXXXXTRQVLDLE-----DLQFSSG--SHFMSNKRCELPDGSFRKQRKGYEEVHV 448
                         +V  +      D Q ++   S F++  +  LP+G  R+  K YEEV +
Sbjct:   385 RSAPILGRQRDTEVEKIRYPHVYDSQAAARETSAFIAGAKMILPEGIQRENTKLYEEVRI 444

Query:   449 PALKPKPMGPDETLVPIDKLPRYVQHAFEDFKTLNRIQSRLCKSALESDENLLLCAPTGA 508
             P  +P P+G +E  V I  L    Q AF+  K LNRIQS +  +A  ++EN+L+CAPTGA
Sbjct:   445 PYSEPMPVGFEEKPVYIQDLDEVGQLAFKGMKRLNRIQSIVFDTAYNTNENMLICAPTGA 504

Query:   509 GKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNFGK 558
             GKTN+A+L +L EI +H +  G +  +EFKI+YVAPM++L  EM   F K
Sbjct:   505 GKTNIAMLTVLHEIRQHFH-QGVLKKNEFKIVYVAPMKALAAEMTNYFSK 553

 Score = 307 (113.1 bits), Expect = 1.2e-169, Sum P(7) = 1.2e-169
 Identities = 56/111 (50%), Positives = 83/111 (74%)

Query:   559 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 618
             DE+HLLH++RGPVLE+++ART+R +E+TQ  +R++GLSATLPNY DVAT L + P  GLF
Sbjct:   612 DEVHLLHEDRGPVLESIVARTLRQVESTQSMIRILGLSATLPNYLDVATFLHVNPYIGLF 671

Query:   619 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEH--AGRNQLLV 667
             YFD  FRPV L Q ++G+     +++   M+++ YE V++   AG +Q++V
Sbjct:   672 YFDGRFRPVPLGQTFLGIKSANKMQQLNNMDEVCYESVLKQVKAG-HQVMV 721

 Score = 232 (86.7 bits), Expect = 6.5e-159, Sum P(8) = 6.5e-159
 Identities = 43/95 (45%), Positives = 65/95 (68%)

Query:   668 STLRVELTISPDFQWDEKLHGG-SEGFWILVEDVDSEVVLHHEYFL-LKSRYATDD-HVV 724
             + LRV L I PDF W++++HG   E +WI VED  ++ + H EYFL LK +    +  ++
Sbjct:  1195 TVLRVSLNIYPDFSWNDQVHGTVGEPWWIWVEDPTNDHIYHSEYFLALKKQVINKEAQLL 1254

Query:   725 KFFVPVFEPLPPQYFLRIVSDRWIGAETILPVSFR 759
              F +P+FEPLP QY++R VSDRW+GAE +  ++F+
Sbjct:  1255 VFTIPIFEPLPSQYYIRAVSDRWLGAEAVCIINFQ 1289

 Score = 185 (70.2 bits), Expect = 1.6e-95, Sum P(5) = 1.6e-95
 Identities = 49/114 (42%), Positives = 64/114 (56%)

Query:   546 RSLVQEMVGNFGKDEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDV 605
             RS VQ+ V     DEIHLL +ERGPVLE +++RT      T++ VR+VGLS  L N +D+
Sbjct:  1442 RSYVQQ-VNILIIDEIHLLGEERGPVLEVIVSRTNFISSHTEKPVRIVGLSTALANARDL 1500

Query:   606 ATLLRIKPETGLFYFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEH 659
             A  L IK + GLF F  S RPV LE    G   +    R   MN   +++   H
Sbjct:  1501 ADWLNIK-QMGLFNFRPSVRPVPLEVHIQGFPGQHYCPRMASMNKPAFQESHTH 1553

 Score = 149 (57.5 bits), Expect = 1.2e-169, Sum P(7) = 1.2e-169
 Identities = 25/79 (31%), Positives = 50/79 (63%)

Query:  1600 IAPFYPQKREEGWWVVIGDPKTNSLLSIKRLT-LQQKAKIKLDFVAPN-PGHHSYALYFM 1657
             + P +P+ ++EGW++++G+     L+++KR+  ++   +  + F  P  PG + + LY M
Sbjct:  2103 VTPRFPKLKDEGWFLILGEVDKRELVAVKRVGFVRTHHEASISFFTPEAPGRYIFTLYLM 2162

Query:  1658 SDAYLGCDQEYKFSIDVSE 1676
             SD YLG DQ+Y   ++V++
Sbjct:  2163 SDCYLGLDQQYDIFLNVTK 2181

 Score = 146 (56.5 bits), Expect = 1.8e-124, Sum P(6) = 1.8e-124
 Identities = 28/54 (51%), Positives = 38/54 (70%)

Query:   761 PRGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNFGK 814
             P GAGKTN+A+L +L EI +H +  G +  +EFKI+YVAPM++L  EM   F K
Sbjct:   501 PTGAGKTNIAMLTVLHEIRQHFH-QGVLKKNEFKIVYVAPMKALAAEMTNYFSK 553

 Score = 108 (43.1 bits), Expect = 4.2e-90, Sum P(5) = 4.2e-90
 Identities = 27/94 (28%), Positives = 51/94 (54%)

Query:   463 VPIDKLPRYVQHAFEDFKTLNRIQSRLCKSALESDENLLLCAPTGAGKTNVALLCMLQEI 522
             +P+  L      A  +F   N +Q+++  +   +D N+LL APTG+GKT  A L + +  
Sbjct:  1309 LPVTALGCKAYEALYNFSHFNPVQTQIFHTLYHTDCNVLLGAPTGSGKTVAAELAIFRVF 1368

Query:   523 GKHINADGTINADEFKIIYVAPMRSLVQEMVGNF 556
              K+  +         K +Y+AP+++LV+E + ++
Sbjct:  1369 NKYPTS---------KAVYIAPLKALVRERMDDW 1393

 Score = 100 (40.3 bits), Expect = 1.2e-169, Sum P(7) = 1.2e-169
 Identities = 19/48 (39%), Positives = 29/48 (60%)

Query:  1466 EAIRLIQACVDVLSSNGWLSPAVAAMEVAQMITQAMWSKDSYLKQLPH 1513
             +A+R+ QA +DV +S GWL   +    + QM+ Q  W KDS L  +P+
Sbjct:  1919 QALRVCQAMLDVAASQGWLVTTLNITHLIQMVIQGRWLKDSSLLTIPN 1966

 Score = 92 (37.4 bits), Expect = 2.7e-77, Sum P(4) = 2.7e-77
 Identities = 43/225 (19%), Positives = 88/225 (39%)

Query:  1451 GGSEGFWILVED--VDSEAIRLIQACVDVLSSNGWLSPAVAAMEVAQMITQAMWSKDSYL 1508
             G  + F ++ +   V   A R+++A  ++     W +     + ++++I + +W   S L
Sbjct:  1069 GEMDSFSLISDSAYVAQNAARIVRALFEIALRKRWPTMTYRLLNLSKVIDKRLWGWASPL 1128

Query:  1509 KQLPHFNADIIKRCTEKGVETVFDIMXXXXXXXXXXXXXXXXXXADVARFCNRYPNIELS 1568
             +Q       I+ R  EK + TV D +                    V +  ++ P++ + 
Sbjct:  1129 RQFSVLPPHILTRLEEKNL-TV-DKLKDMRKDEIGHILHHVNIGLKVKQCVHQIPSVTME 1186

Query:  1569 YEVLNKDRIXXXXXXXXXXXLDREDEVTGPVIAPFYPQKREEGWWVVIGDPKTNSL---- 1624
               +    R                D+V G V  P         WW+ + DP  + +    
Sbjct:  1187 ASIQPITRTVLRVSLNIYPDFSWNDQVHGTVGEP---------WWIWVEDPTNDHIYHSE 1237

Query:  1625 --LSIKRLTLQQKAKIKLDFVAP--NPGHHSYALYFMSDAYLGCD 1665
               L++K+  + ++A++ L F  P   P    Y +  +SD +LG +
Sbjct:  1238 YFLALKKQVINKEAQL-LVFTIPIFEPLPSQYYIRAVSDRWLGAE 1281

 Score = 59 (25.8 bits), Expect = 6.5e-159, Sum P(8) = 6.5e-159
 Identities = 15/52 (28%), Positives = 29/52 (55%)

Query:   761 PRGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNF 812
             P G+GKT  A L + +   K+  +         K +Y+AP+++LV+E + ++
Sbjct:  1351 PTGSGKTVAAELAIFRVFNKYPTS---------KAVYIAPLKALVRERMDDW 1393

 Score = 51 (23.0 bits), Expect = 6.3e-10, Sum P(3) = 6.3e-10
 Identities = 13/51 (25%), Positives = 26/51 (50%)

Query:   258 DKSLHPLDIDA----YWLQRRLSKIYDDAMVSQAKAGEVLNILKSAGDDRD 304
             ++S+ PL        Y+L+ +  K++ D +  +    E+L+IL  A +  D
Sbjct:  1807 NRSIEPLTCGRIASYYYLKHKTVKMFKDRLKPECSTEELLSILSDAEEYTD 1857

 Score = 47 (21.6 bits), Expect = 1.2e-169, Sum P(7) = 1.2e-169
 Identities = 25/96 (26%), Positives = 46/96 (47%)

Query:   256 KKDKSLHPLDIDAYWLQRRLSKIYDDAMVSQAKAGEVLNILKSAGDDRDAENQLVLLLGY 315
             K + SL   +++ Y L   L ++ +   V       + ++L SA    + +++L  LLG 
Sbjct:   217 KSNGSLLWCEVEKY-LNATLKEMTEAPRVEDLCC-TLYDMLASAKSGDELQDELFELLGP 274

Query:   316 DCFDFIKMLKKYRQMILYCTLLASSQSESERQKLRD 351
                D I+ L + R  I+   L  +S S+ + Q L+D
Sbjct:   275 GGLDLIEKLLQNRITIVDRFL--NSSSDHKFQVLQD 308

 Score = 41 (19.5 bits), Expect = 1.2e-169, Sum P(7) = 1.2e-169
 Identities = 7/28 (25%), Positives = 15/28 (53%)

Query:  1419 LELATHIQPITRSTLRVELTISPDFQWD 1446
             +EL   + P  +S  + +L ++   +WD
Sbjct:  1406 IELTGDVTPDMKSIAKADLIVTTPEKWD 1433

 Score = 37 (18.1 bits), Expect = 4.8e-44, Sum P(5) = 4.8e-44
 Identities = 27/90 (30%), Positives = 39/90 (43%)

Query:   647 VMNDIVYEKVMEHAGRNQL--LVSTLRV-ELTISPDFQWDEKLHGGSE-GFWILVEDVDS 702
             V + +V EK ++ A   Q    +S L V  + IS    WD+ + G +E     L  D   
Sbjct:  2009 VFSSMV-EKELQPAKTKQAWNFLSHLPVINVGISVKGSWDDSVEGHNELSISTLTADKRD 2067

Query:   703 E---VVLH--HEYFLLKS--RYATDDHVVK 725
             E   + LH   +Y L  S  R   + H VK
Sbjct:  2068 ENTWIKLHADQQYVLQVSLQRVHFEFHKVK 2097


>UNIPROTKB|G4N5J1 [details] [associations]
            symbol:MGG_06124 "Activating signal cointegrator 1 complex
            subunit 3" species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] [GO:0043581 "mycelium development" evidence=IEP]
            InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00382
            SMART:SM00490 GO:GO:0005524 EMBL:CM001233 GO:GO:0003676
            GO:GO:0043581 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            KO:K01529 InterPro:IPR004179 Pfam:PF02889 SMART:SM00611
            SMART:SM00973 GO:GO:0008026 RefSeq:XP_003711991.1
            ProteinModelPortal:G4N5J1 EnsemblFungi:MGG_06124T0 GeneID:2684274
            KEGG:mgr:MGG_06124 Uniprot:G4N5J1
        Length = 1998

 Score = 886 (316.9 bits), Expect = 4.3e-168, Sum P(5) = 4.3e-168
 Identities = 181/454 (39%), Positives = 272/454 (59%)

Query:  1018 GVNLPAHTVVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWV 1077
             G++    T  DR L+E LFA+  ++VL  TATLAWGVNLPA  V+IKGTQ+Y+ ++G++V
Sbjct:   606 GIHHAGMTRSDRNLMERLFAEGVLKVLCCTATLAWGVNLPAAAVVIKGTQVYSAQEGKFV 665

Query:  1078 ELGALDVLQMLGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMISKLPDMLN 1137
             +LG LDVLQ+ GRAGRPQ++  G G++ T   +L +YL+ +  QLP+ES+  SKL D LN
Sbjct:   666 DLGILDVLQIFGRAGRPQFEDTGIGMICTTADKLSHYLTAVTDQLPIESRFSSKLVDNLN 725

Query:  1138 AEIVLGTVQNLKDAVTWLGYTYLYIRMLRAPNLYGISHDALKEDPLLECHRADLIHTAAL 1197
             AEI LGTV ++ +AV W+GY+YLY+RM + P  YGIS    +EDP L   R  L   AA 
Sbjct:   726 AEIALGTVTSIPEAVQWIGYSYLYVRMRKNPMAYGISWAEFEEDPELVQRRRTLAIQAAR 785

Query:  1198 HLERSGLIKYDRKSGHMQVTELGRIASHYYCTHETMATYNQLLKPTLSEIELFRVFSLSG 1257
              L+   ++ ++  +  ++  ++GRIAS YY  H ++  +N ++ P  +E ++ ++ ++SG
Sbjct:   786 TLQECQMVIFNETTEELRSKDIGRIASQYYILHTSIQVFNTMMSPYATEADVLKMIAMSG 845

Query:  1258 EFRHITVRXXXXXXXXXXX-XRAPIP--IKESTDEPSAKVNILLQAYISQLKLEGFALMS 1314
             EF +I  R             RA +P  +    D P AK NILLQAYIS+++ E FAL +
Sbjct:   846 EFDNIQSRDSEAKELTRMKDSRAAVPCDVAGGIDTPQAKTNILLQAYISKVQPEDFALGN 905

Query:  1315 DMVFVTQSAARLMRAIFEIVLYRGWAQLADKALSLCKMVDRRMWQSMSPLRQFRXXXXXX 1374
             D+ +V Q A R+ RAIF I L R W       L+L K +++R+W    PL QF       
Sbjct:   906 DLNYVAQQAGRICRAIFMIALNRRWGHQCLVLLTLAKSIEKRVWPFQHPLHQFELPKPIL 965

Query:  1375 XXXXXXXNFPWERLYDLGPNEIGELIRVPKLGKTIHKYVHQFPKLELATHIQPITRSTLR 1434
                    +   E + D+   EIG L+     G  +   +  FP + +   I P+ R  LR
Sbjct:   966 NQLDAKDSLSVEAMRDMEAAEIGALVHNHGAGTKLANMISNFPTVSVEAEIAPLNRDVLR 1025

Query:  1435 VELTISPDFQWDEKLHGGSEGFWILVEDVDSEAI 1468
             + L I+PDF+W+++LHG SE ++I V++ ++  I
Sbjct:  1026 IRLFITPDFRWNDRLHGTSESYYIWVDNSETSEI 1059

 Score = 516 (186.7 bits), Expect = 4.3e-168, Sum P(5) = 4.3e-168
 Identities = 107/215 (49%), Positives = 147/215 (68%)

Query:   815 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 874
             DE+H+LHDERG VLE+L+ART R +E+TQ  +R+VGLSATLPN+ DVA  L++    GLF
Sbjct:   436 DEVHMLHDERGAVLESLVARTERQVESTQSLIRIVGLSATLPNFIDVADFLKVNRMQGLF 495

Query:   875 YFDNSFRPVALEQQYIGVTEKKALKRFQV-MNDIVYEKVMEHAGRN-QLLVFVHSRKETG 932
             YFD SFRPV LEQ +IGV  K   K+ +  ++++ ++KV E   ++ Q++VFVHSR++T 
Sbjct:   496 YFDASFRPVPLEQHFIGVKGKAGTKQSRENLDEVAFDKVREMLEKDHQVMVFVHSRRDTL 555

Query:   933 KTARAIRDMCLEKDTLGQFLREGSASMEVLRTEADQVKNGELRDLLPYGFAIHHAGMTRV 992
             +TA+ + +  +++  L  F        +    +    K  ELRDL+P G  IHHAGMTR 
Sbjct:   556 QTAKMLHERAVDQACLDLFDPSMHPKYDAAIRDMKTCKARELRDLVPKGMGIHHAGMTRS 615

Query:   993 DRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
             DR L+E LFA+  ++VL  TATLAWGVNLPA  VV
Sbjct:   616 DRNLMERLFAEGVLKVLCCTATLAWGVNLPAAAVV 650

 Score = 422 (153.6 bits), Expect = 2.2e-141, Sum P(7) = 2.2e-141
 Identities = 123/439 (28%), Positives = 214/439 (48%)

Query:  1015 LAWGVNLPAHTVV--DRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPE 1072
             +++G+ L    +V  DR L E+LF +  IQ+LV+T+TLAWGVNLPAH V++KGTQ Y+ +
Sbjct:  1439 ISFGIGLHHAGLVESDRQLAEELFLNNKIQILVATSTLAWGVNLPAHLVVVKGTQFYDAK 1498

Query:  1073 KGRWVELGALDVLQMLGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMISKL 1132
                + ++   DVLQMLGRAGRPQ+D  G   + T  S+  +Y   L+   PVES + + L
Sbjct:  1499 IEGYKDMDLTDVLQMLGRAGRPQFDNSGVARIFTQDSKKDFYKHFLHTGFPVESSLHTVL 1558

Query:  1133 PDMLNAEIVLGTVQNLKDAVTWLGYTYLYIRMLRAPNLYGISHDALKEDPLLECHRAD-- 1190
              + L AEI   T+   +DA+ +L +T+ + R+ + P+ YG+     ++  +     A+  
Sbjct:  1559 DNHLCAEISAETIITKQDALDYLTWTFFFRRLHKNPSYYGLEIPVEEQTSIAAQQAANDY 1618

Query:  1191 ---LIHTAALHLERSGLIKYDRKSGHMQVTELGRIASHYYCTHETMATYNQLLKPTLSEI 1247
                +I ++   L  S  ++    +G +  T LG+I S+YY +H+T+ +  +  K   +  
Sbjct:  1619 IISMIDSSLDELATSKCVEV-YPNGDVDPTPLGKIMSYYYLSHKTIRSLVKNAKAGATFA 1677

Query:  1248 ELFRVFSLSGEFRHITVRXXXXXXXXXXXXRAPIP--IKESTD--EPSAKVNILLQAYIS 1303
             ++      + E+  + VR              PI   +  S    +P  K  +LLQA++S
Sbjct:  1678 DVLSWMCRAIEYDELPVRHNEDLINIELSKALPIATDLFGSLPMWDPHVKAFLLLQAHMS 1737

Query:  1304 QLKLEGFALMSDMVFVTQSAARLMRAIFEIVLYRGWAQLADKALSLCKMVDRRMWQSMSP 1363
             ++ L     + D   V   A R+++A  +++   G      + + L + +    W + SP
Sbjct:  1738 RIPLPITDYVGDQTSVLDQAIRIIQASIDVLTELGHLSSCLEMIKLLQCIKSARWPTDSP 1797

Query:  1364 LRQFRXXX-XXXXXXXXXXNFPWERLYDLGPNEIGELIR---VPKLGKT-IHKYVHQFPK 1418
             L                  +    +L  L   ++G  I+   VP   +    K V   P 
Sbjct:  1798 LAILPGLEPESLATKGNKGSVTLGKLASLPNKQLGSAIKELGVPASQQNKFQKAVSMLP- 1856

Query:  1419 LELATHIQPITRSTLRVEL 1437
              +L+  ++ IT ++L V L
Sbjct:  1857 -DLSVKVEDITAASLSVVL 1874

 Score = 375 (137.1 bits), Expect = 2.2e-141, Sum P(7) = 2.2e-141
 Identities = 85/214 (39%), Positives = 125/214 (58%)

Query:   815 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 874
             DEIHLL  +RGP+LE +++R      +T+  VRL+G+S    N  D+   L +K   GLF
Sbjct:  1280 DEIHLLAGDRGPILEIIVSRMNYIAASTKNSVRLLGMSTACANATDLGNWLGVKE--GLF 1337

Query:   875 YFDNSFRPVALEQQYIGVTEKKAL-KRFQVMNDIVYEKVMEHAGRNQLLVFVHSRKETGK 933
              F +S RPV LE    G  E +      Q MN   +  V  H+    ++VFV SR++T  
Sbjct:  1338 NFRHSVRPVPLELYIDGFPEVRGFCPLMQSMNRPTFLAVKNHSPTKPVIVFVPSRRQTRL 1397

Query:   934 TARAIRDMCLEKDTLGQFLREGSASMEVLRTEADQVKNGELRDLLPYGFAIHHAGMTRVD 993
             TA+ + +MC  +D   +FL      +++  T   +VK+  L++ + +G  +HHAG+   D
Sbjct:  1398 TAKDLINMCGMEDNPRRFLNMDEDDLQLNLT---RVKDDALKEAISFGIGLHHAGLVESD 1454

Query:   994 RTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
             R L E+LF +  IQ+LV+T+TLAWGVNLPAH VV
Sbjct:  1455 RQLAEELFLNNKIQILVATSTLAWGVNLPAHLVV 1488

 Score = 290 (107.1 bits), Expect = 2.1e-144, Sum P(5) = 2.1e-144
 Identities = 58/111 (52%), Positives = 82/111 (73%)

Query:   559 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 618
             DE+H+LHDERG VLE+L+ART R +E+TQ  +R+VGLSATLPN+ DVA  L++    GLF
Sbjct:   436 DEVHMLHDERGAVLESLVARTERQVESTQSLIRIVGLSATLPNFIDVADFLKVNRMQGLF 495

Query:   619 YFDNSFRPVALEQQYIGVTEKKALKRFQV-MNDIVYEKVMEHAGRN-QLLV 667
             YFD SFRPV LEQ +IGV  K   K+ +  ++++ ++KV E   ++ Q++V
Sbjct:   496 YFDASFRPVPLEQHFIGVKGKAGTKQSRENLDEVAFDKVREMLEKDHQVMV 546

 Score = 275 (101.9 bits), Expect = 4.3e-168, Sum P(5) = 4.3e-168
 Identities = 61/152 (40%), Positives = 93/152 (61%)

Query:   417 FSSGSHFM-SNKRCELPDGSFRKQRKGYEEVHVPALKPKPMGPDETLVPIDKLPRYVQHA 475
             FS+G+    + KR  LP GS R +   YEE  +PA KP  + P +TLV I  L    +  
Sbjct:   226 FSAGNSLNHAGKRYALPVGSQRLEFPKYEEYFIPAGKPGGLWPGQTLVKISDLDGLCRRT 285

Query:   476 FEDFKTLNRIQSRLCKSALESDENLLLCAPTGAGKTNVALLCMLQEIGKHIN-------- 527
             F+ ++TLNR+QS +   A +++EN+L+CAPTGAGKT+ A+L +L  IG+++         
Sbjct:   286 FKGYQTLNRMQSLVYPIAYKTNENMLVCAPTGAGKTDAAMLTILHAIGQYVTPNPLQNTT 345

Query:   528 -ADGTINADEFKIIYVAPMRSLVQEMVGNFGK 558
               D  ++ ++FKI+YVAPM++L  E+    GK
Sbjct:   346 ATDFAVHTEDFKIVYVAPMKALAAEITEKLGK 377

 Score = 269 (99.8 bits), Expect = 2.2e-141, Sum P(7) = 2.2e-141
 Identities = 44/90 (48%), Positives = 68/90 (75%)

Query:   670 LRVELTISPDFQWDEKLHGGSEGFWILVEDVDSEVVLHHEYFLLKSRYATDDHVVKFFVP 729
             LR+ L I+PDF+W+++LHG SE ++I V++ ++  + HHE+F+L  R   DDH + F +P
Sbjct:  1024 LRIRLFITPDFRWNDRLHGTSESYYIWVDNSETSEIYHHEFFILSRRKLYDDHELNFTIP 1083

Query:   730 VFEPLPPQYFLRIVSDRWIGAETILPVSFR 759
             + +PLP Q ++R VSDRW+GAET+ PVSF+
Sbjct:  1084 LSDPLPTQIYVRAVSDRWLGAETVTPVSFQ 1113

 Score = 155 (59.6 bits), Expect = 2.6e-39, Sum P(4) = 2.6e-39
 Identities = 40/110 (36%), Positives = 57/110 (51%)

Query:   559 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 618
             DEIHLL  +RGP+LE +++R      +T+  VRL+G+S    N  D+   L +K   GLF
Sbjct:  1280 DEIHLLAGDRGPILEIIVSRMNYIAASTKNSVRLLGMSTACANATDLGNWLGVKE--GLF 1337

Query:   619 YFDNSFRPVALEQQYIGVTEKKAL-KRFQVMNDIVYEKVMEHAGRNQLLV 667
              F +S RPV LE    G  E +      Q MN   +  V  H+    ++V
Sbjct:  1338 NFRHSVRPVPLELYIDGFPEVRGFCPLMQSMNRPTFLAVKNHSPTKPVIV 1387

 Score = 147 (56.8 bits), Expect = 4.3e-168, Sum P(5) = 4.3e-168
 Identities = 44/168 (26%), Positives = 75/168 (44%)

Query:  1466 EAIRLIQACVDVLSSNGWLSPAVAAMEVAQMITQAMWSKDSYLKQLPHFNADIIKRCTEK 1525
             +AIR+IQA +DVL+  G LS  +  +++ Q I  A W  DS L  LP    + +     K
Sbjct:  1756 QAIRIIQASIDVLTELGHLSSCLEMIKLLQCIKSARWPTDSPLAILPGLEPESLATKGNK 1815

Query:  1526 GVETVFDIMXXXXXXXXXXXXXXXXXXADVARF---CNRYPNIELSYEVLNKDRIXXXXX 1582
             G  T+  +                   +   +F    +  P++ +  E +    +     
Sbjct:  1816 GSVTLGKLASLPNKQLGSAIKELGVPASQQNKFQKAVSMLPDLSVKVEDITAASLSVVLR 1875

Query:  1583 XXXXXXLDREDEVTGPVIAPFYPQKREEGWWVVIGDPKTNSLLSIKRL 1630
                   +DRE  V     AP YP+ + EGW V++GD  T+ ++++KR+
Sbjct:  1876 RANPL-VDREARV----YAPKYPKPQTEGWLVLVGDIATDDVVAVKRV 1918

 Score = 114 (45.2 bits), Expect = 3.3e-151, Sum P(5) = 3.3e-151
 Identities = 24/63 (38%), Positives = 38/63 (60%)

Query:   761 PRGAGKTNVALLCMLQEIGKHIN---------ADGTINADEFKIIYVAPMRSLVQEMVGN 811
             P GAGKT+ A+L +L  IG+++           D  ++ ++FKI+YVAPM++L  E+   
Sbjct:   315 PTGAGKTDAAMLTILHAIGQYVTPNPLQNTTATDFAVHTEDFKIVYVAPMKALAAEITEK 374

Query:   812 FGK 814
              GK
Sbjct:   375 LGK 377

 Score = 108 (43.1 bits), Expect = 3.8e-45, Sum P(4) = 3.8e-45
 Identities = 30/97 (30%), Positives = 55/97 (56%)

Query:   463 VPIDKLPRYV-QHAF-EDFKTLNRIQSRLCKSALESDENLLLCAPTGAGKTNVALLCMLQ 520
             +PI  L   + +H + + F+  N +Q+++  +   +  N+LL +PTG+GKT  A L M  
Sbjct:  1133 LPIGALKNPILEHVYAQRFQYFNPMQTQIFHTLYHTPANVLLGSPTGSGKTVAAELAMWW 1192

Query:   521 EIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNFG 557
                +     G+      K++Y+APM++LV+E V ++G
Sbjct:  1193 AFRER---PGS------KVVYIAPMKALVRERVKDWG 1220

 Score = 67 (28.6 bits), Expect = 2.2e-141, Sum P(7) = 2.2e-141
 Identities = 19/53 (35%), Positives = 30/53 (56%)

Query:   761 PRGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNFG 813
             P G+GKT  A L M     +     G+      K++Y+APM++LV+E V ++G
Sbjct:  1177 PTGSGKTVAAELAMWWAFRER---PGS------KVVYIAPMKALVRERVKDWG 1220

 Score = 56 (24.8 bits), Expect = 4.3e-168, Sum P(5) = 4.3e-168
 Identities = 13/64 (20%), Positives = 31/64 (48%)

Query:   270 WLQRRLSKIYD--DAMVSQAKAGEVLNILKSAGDDRDAENQLVLLLGYDCFDFIKMLKKY 327
             WL ++  ++      + S     ++   L S+  + + ++ L  L+G+D  DF+  L  +
Sbjct:   102 WLTKKCDEVASRKSGLSSNHLQDQISTFLDSSRSEDELQSSLTDLIGFDDLDFVIDLISH 161

Query:   328 RQMI 331
             R+ +
Sbjct:   162 RKEV 165

 Score = 44 (20.5 bits), Expect = 5.3e-67, Sum P(4) = 5.3e-67
 Identities = 20/115 (17%), Positives = 42/115 (36%)

Query:  1463 VDSEAIRLIQACVDVLSSNGWLSPAVAAMEVAQMITQAMWSKDSYLKQLPHFNADIIKRC 1522
             V  +A R+ +A   +  +  W    +  + +A+ I + +W     L Q       I+ + 
Sbjct:   910 VAQQAGRICRAIFMIALNRRWGHQCLVLLTLAKSIEKRVWPFQHPLHQF-ELPKPILNQL 968

Query:  1523 TEKGVETVFDIMXXXXXXXXXXXXXXXXXXADVARFCNRYPNIELSYEV--LNKD 1575
               K   +V + M                    +A   + +P + +  E+  LN+D
Sbjct:   969 DAKDSLSV-EAMRDMEAAEIGALVHNHGAGTKLANMISNFPTVSVEAEIAPLNRD 1022

 Score = 44 (20.5 bits), Expect = 0.00029, Sum P(2) = 0.00029
 Identities = 14/48 (29%), Positives = 22/48 (45%)

Query:   264 LDIDAYWLQRRLSKIYDDAMVSQAKAGEVLNILKSAGDDRDAENQLVL 311
             L++D   LQ  L+++ DDA+      G  L+       DR    +L L
Sbjct:  1416 LNMDEDDLQLNLTRVKDDALKEAISFGIGLHHAGLVESDRQLAEELFL 1463


>POMBASE|SPBC13G1.10c [details] [associations]
            symbol:mug81 "ATP-dependent RNA helicase Slh1
            (predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISS]
            [GO:0005829 "cytosol" evidence=IDA] [GO:2000765 "regulation of
            cytoplasmic translation" evidence=ISS] InterPro:IPR001650
            InterPro:IPR003593 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00382 SMART:SM00490 PomBase:SPBC13G1.10c
            GO:GO:0005829 GO:GO:0005524 GO:GO:0007126 GO:GO:2000765
            EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K01529
            InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
            eggNOG:COG1204 HOGENOM:HOG000157749 GO:GO:0004004 PIR:T39411
            RefSeq:NP_596560.1 ProteinModelPortal:O60072 PRIDE:O60072
            EnsemblFungi:SPBC13G1.10c.1 GeneID:2539673 KEGG:spo:SPBC13G1.10c
            OMA:RKPTGEG OrthoDB:EOG4H75KM NextBio:20800827 Uniprot:O60072
        Length = 1935

 Score = 966 (345.1 bits), Expect = 6.3e-163, Sum P(5) = 6.3e-163
 Identities = 193/437 (44%), Positives = 277/437 (63%)

Query:  1028 DRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQM 1087
             DR L E LF+   +++L  TATLAWGVNLPA+ V+IKGTQ+Y+P+KG +V+LG LDVLQ+
Sbjct:   599 DRHLTERLFSMGILKILCCTATLAWGVNLPAYAVLIKGTQLYDPQKGSFVDLGVLDVLQI 658

Query:  1088 LGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMISKLPDMLNAEIVLGTVQN 1147
              GRAGRPQ+++     +IT H +L +Y+S++  Q P+ES+   +L D LNAE+ LGTV N
Sbjct:   659 FGRAGRPQFESSAVAYIITTHDKLSHYISVVTQQSPIESRFTDRLVDNLNAEVSLGTVTN 718

Query:  1148 LKDAVTWLGYTYLYIRMLRAPNLYGISHDALKEDPLLECHRADLIHTAALHLERSGLIKY 1207
             + +AV+WLGYTYLYIRM R P +YGI++D L EDPLL   R +L+  AA  L  + +I Y
Sbjct:   719 IDEAVSWLGYTYLYIRMRRNPLVYGIAYDELVEDPLLGSKRRELVSVAAGRLADNQMIVY 778

Query:  1208 DRKSGHMQVTELGRIASHYYCTHETMATYNQLLKPTLSEIELFRVFSLSGEFRHITVRXX 1267
             ++K+G++   +LGRIAS+YY  ++T++T N LLK  +SE ++  + S   EF  I  R  
Sbjct:   779 NKKNGYLIPKDLGRIASNYYINYQTVSTLNNLLKSKMSEADIIALLSQCSEFSQIKSREN 838

Query:  1268 XXXXXXXXXXRA-PIPIKESTDEPSAKVNILLQAYISQLKLEGFALMSDMVFVTQSAARL 1326
                        + P  +++S    S KVN++LQ+YIS+  +E F L SD  +V Q+A R+
Sbjct:   839 EHRELESLMENSSPCQLRDSISNTSGKVNVILQSYISRAHVEDFTLTSDTNYVAQNAGRI 898

Query:  1327 MRAIFEIVLYRGWAQLADKALSLCKMVDRRMWQSMSPLRQFRXXXXXXXXXXXX-XNFPW 1385
              RA+FEI + R WA  A   LSL K +DRR W    PL QF               +   
Sbjct:   899 TRALFEIAMSRTWAS-AFTILSLNKSIDRRQWSFEHPLLQFDLPHDLAVKVENQCGSLSL 957

Query:  1386 ERLYDLGPNEIGELIRVPKLGKTIHKYVHQFPKLELATHIQPITRSTLRVELTISPDFQW 1445
             E L D+   E+G+LI   K+G T+ K++ + P L +   + P+T++ LR+ L I+P+F W
Sbjct:   958 EELSDMSTGELGDLIHNRKMGPTVKKFISKLPLLNINVDLLPLTKNVLRLVLNITPNFNW 1017

Query:  1446 DEKLHGGSEGFWILVED 1462
             D + HG S+ FWI VED
Sbjct:  1018 DMRYHGNSQMFWIFVED 1034

 Score = 446 (162.1 bits), Expect = 6.3e-163, Sum P(5) = 6.3e-163
 Identities = 90/214 (42%), Positives = 135/214 (63%)

Query:   815 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 874
             DE+H+LHDERG V+E+L+ART R +E +Q+ +R+VGLSATLPNY DVA  L +    GLF
Sbjct:   421 DEVHMLHDERGAVIESLVARTQRLVETSQQMIRIVGLSATLPNYLDVADFLGVNRYKGLF 480

Query:   875 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGR-NQLLVFVHSRKETGK 933
             YF ++FRP  +EQ +IG      +    + ++  ++KV++     +Q+++FVHSRKET  
Sbjct:   481 YFSSAFRPCPIEQHFIGAKGSPKIVNSNI-DEACFDKVLKLIQEGHQVMIFVHSRKETIN 539

Query:   934 TARAIRDMCLEKDTLGQFLREGSASMEVLRTEADQVKNGELRDLLPYGFAIHHAGMTRVD 993
             +A+ +R+    +               + + +  + KN EL++L  Y   IH+AGM R D
Sbjct:   540 SAKKLREQFFHEGEADLLDNSQHEKYSLAQRDVSKSKNKELKELFKYSMGIHNAGMLRSD 599

Query:   994 RTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
             R L E LF+   +++L  TATLAWGVNLPA+ V+
Sbjct:   600 RHLTERLFSMGILKILCCTATLAWGVNLPAYAVL 633

 Score = 419 (152.6 bits), Expect = 9.0e-131, Sum P(6) = 9.0e-131
 Identities = 126/457 (27%), Positives = 216/457 (47%)

Query:  1028 DRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQM 1087
             DR + E+LF +  +Q+L++T+TLAWGVN PAH VI+KGT+ Y+ + G + ++   DVLQM
Sbjct:  1434 DRKISEELFVNNKVQILIATSTLAWGVNTPAHLVIVKGTEYYDAKIGGYKDMDLTDVLQM 1493

Query:  1088 LGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMISKLPDMLNAEIVLGTVQN 1147
             LGRAGRPQ+D  G   +     +  +Y   L+   PVES +   L + LNAEI  GT+  
Sbjct:  1494 LGRAGRPQFDNSGVARIFVQDIKKSFYKHFLHSGFPVESYLHKVLDNHLNAEIATGTIDC 1553

Query:  1148 LKDAVTWLGYTYLYIRMLRAPNLYGISHDALKEDPLLECHRADLIHTAALHLERSGLIKY 1207
             ++ A+ +L  TY Y R+ + P  YG   D  K    ++ + + L+ TA   LE+S  I Y
Sbjct:  1554 IQGAMDFLTCTYFYRRVHQNPVYYGADGDDQKS---IDTYLSKLVVTAFNELEKSACI-Y 1609

Query:  1208 DRKSGHMQVTELGRIASHYYCTHETMATYNQLLKPTLSEIEL-FRVFSLSGEFRHITVRX 1266
                      T LGRI S+YY  H T+  + Q +    +E +L  ++ + + EF  + +R 
Sbjct:  1610 RVNEETYAPTTLGRIVSYYYLFHTTIRNFVQKITEN-AEFDLALQLLAEASEFDDLAIRH 1668

Query:  1267 XXXXXXXXXXXRAPIP---IKESTDEPSAKVNILLQAYISQLKLEGFALMSDMVFVTQSA 1323
                                +     +   K  IL QA++++LKL     ++D   V    
Sbjct:  1669 NEDLINIEINKSLKYSAACLNLPMVDAHVKAFILTQAHMARLKLPVDDYVTDTSTVLDQV 1728

Query:  1324 ARLMRAIFEIVLYRGWAQLADKALSLCKMVDR-----RMWQSMSPLRQFRXXXXXXXXXX 1378
              R++++  ++    G++ +  + +SL + + +      ++++  P               
Sbjct:  1729 IRIIQSYIDVSAELGYSHVCLQYISLMQCLKQACYPSEIYRASLPGLNASSEKEARDYLN 1788

Query:  1379 XXXNFPWERLYDLGPNEIGELIRVPKLGKTIHKYVHQFPKLELATHIQPITRSTL---RV 1435
                    + LY +  N+   +  +  L  ++  Y    PK+ +        +  L   R+
Sbjct:  1789 KFAGNKTDELYQMLCND-PNVFDIESLVNSLISY----PKMNIEVSQSSSDKLLLYLRRL 1843

Query:  1436 ELTISPDFQWDEKLHGG--SEGFWILVEDVDSEAIRL 1470
                ++PDF     L     SEGF++L+  +DSE   L
Sbjct:  1844 NQPLNPDFYIFAPLFPKPQSEGFFVLI--IDSETQEL 1878

 Score = 383 (139.9 bits), Expect = 9.0e-131, Sum P(6) = 9.0e-131
 Identities = 87/226 (38%), Positives = 131/226 (57%)

Query:   802 RSLVQEMVGNFGKDEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDV 861
             R  VQ+ V     DEIHLL  +RGPVLE +++R       T + VR++GLS  + N  D+
Sbjct:  1249 RKYVQD-VSLIILDEIHLLGSDRGPVLEMIVSRMNYVASQTNKKVRVLGLSTAVANANDL 1307

Query:   862 ATLLRIKPETGLFYFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQL 921
             A  L I+   GLF F +S RPV LE    G   +    R   MN   ++ +  H+    +
Sbjct:  1308 ANWLNIRD--GLFNFRHSVRPVPLEIYIDGFPGRAYCPRMMSMNKPAFQAIKTHSPTQPV 1365

Query:   922 LVFVHSRKETGKTARAIRDMCLEKDTLGQFLREGSASMEVLRTEADQVKNGELRDLLPYG 981
             L+FV SR++T  TA+ +   C  +D   +FL      +E++ +E   V++  L+  LP+G
Sbjct:  1366 LIFVSSRRQTRLTAKDLIAFCGLEDNPRRFLYMDEEELEMIVSE---VEDKSLKLALPFG 1422

Query:   982 FAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
              A+HHAG+T  DR + E+LF +  +Q+L++T+TLAWGVN PAH V+
Sbjct:  1423 IALHHAGLTENDRKISEELFVNNKVQILIATSTLAWGVNTPAHLVI 1468

 Score = 262 (97.3 bits), Expect = 6.3e-163, Sum P(5) = 6.3e-163
 Identities = 63/166 (37%), Positives = 96/166 (57%)

Query:   407 RQVLDLEDLQFSSGSHFMSN------KRCELPDGSFRKQRKGYEEVHVPALKPKPMGPDE 460
             +QV ++E      G   + N      K+  LP GS R+  + YEE+ VP  +  P    E
Sbjct:   197 QQVFEVEKYPHVYGDKRLGNTISVIGKKFALPAGSEREDYQKYEEIIVPHAQRAPQMQGE 256

Query:   461 TLVPIDKLPRYVQHAFEDFKTLNRIQSRLCKSALESDENLLLCAPTGAGKTNVALLCMLQ 520
              L+ I  +    +  F  ++TLNRIQS +   A +++EN+L+CAPTGAGKT+VALL MLQ
Sbjct:   257 KLLEISSMDILCRKTFLSYQTLNRIQSLVYPIAYKTNENMLICAPTGAGKTDVALLAMLQ 316

Query:   521 EIGKHINA----DGT----INADEFKIIYVAPMRSLVQEMVGNFGK 558
              I  ++ +    D +    ++ D+FKI+Y+APM++L  E+V   GK
Sbjct:   317 TISNYVESMNLMDESEPLDVHRDDFKIVYIAPMKALAAEVVEKMGK 362

 Score = 251 (93.4 bits), Expect = 1.8e-142, Sum P(5) = 1.8e-142
 Identities = 47/100 (47%), Positives = 70/100 (70%)

Query:   559 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 618
             DE+H+LHDERG V+E+L+ART R +E +Q+ +R+VGLSATLPNY DVA  L +    GLF
Sbjct:   421 DEVHMLHDERGAVIESLVARTQRLVETSQQMIRIVGLSATLPNYLDVADFLGVNRYKGLF 480

Query:   619 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVME 658
             YF ++FRP  +EQ +IG      +    + ++  ++KV++
Sbjct:   481 YFSSAFRPCPIEQHFIGAKGSPKIVNSNI-DEACFDKVLK 519

 Score = 248 (92.4 bits), Expect = 9.0e-131, Sum P(6) = 9.0e-131
 Identities = 44/93 (47%), Positives = 61/93 (65%)

Query:   665 LLVSTLRVELTISPDFQWDEKLHGGSEGFWILVEDVDSEVVLHHEYFLLKSRYATDDHVV 724
             L  + LR+ L I+P+F WD + HG S+ FWI VED +   +LHHE  LL  R  +  H++
Sbjct:  1000 LTKNVLRLVLNITPNFNWDMRYHGNSQMFWIFVEDSNGLEILHHEQLLLNKRNVSTSHLL 1059

Query:   725 KFFVPVFEPLPPQYFLRIVSDRWIGAETILPVS 757
              F +PV  PLP Q ++  VSD+W+GAET+ PVS
Sbjct:  1060 SFTIPVSNPLPSQLYIIAVSDKWLGAETVTPVS 1092

 Score = 168 (64.2 bits), Expect = 2.3e-33, Sum P(4) = 2.3e-33
 Identities = 44/122 (36%), Positives = 63/122 (51%)

Query:   546 RSLVQEMVGNFGKDEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDV 605
             R  VQ+ V     DEIHLL  +RGPVLE +++R       T + VR++GLS  + N  D+
Sbjct:  1249 RKYVQD-VSLIILDEIHLLGSDRGPVLEMIVSRMNYVASQTNKKVRVLGLSTAVANANDL 1307

Query:   606 ATLLRIKPETGLFYFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQL 665
             A  L I+   GLF F +S RPV LE    G   +    R   MN   ++ +  H+    +
Sbjct:  1308 ANWLNIRD--GLFNFRHSVRPVPLEIYIDGFPGRAYCPRMMSMNKPAFQAIKTHSPTQPV 1365

Query:   666 LV 667
             L+
Sbjct:  1366 LI 1367

 Score = 127 (49.8 bits), Expect = 9.1e-149, Sum P(5) = 9.1e-149
 Identities = 28/62 (45%), Positives = 41/62 (66%)

Query:   761 PRGAGKTNVALLCMLQEIGKHINA----DGT----INADEFKIIYVAPMRSLVQEMVGNF 812
             P GAGKT+VALL MLQ I  ++ +    D +    ++ D+FKI+Y+APM++L  E+V   
Sbjct:   301 PTGAGKTDVALLAMLQTISNYVESMNLMDESEPLDVHRDDFKIVYIAPMKALAAEVVEKM 360

Query:   813 GK 814
             GK
Sbjct:   361 GK 362

 Score = 110 (43.8 bits), Expect = 6.6e-41, Sum P(4) = 6.6e-41
 Identities = 32/107 (29%), Positives = 56/107 (52%)

Query:   479 FKTLNRIQSRLCKSALESDENLLLCAPTGAGKTNVALLCMLQEIGKHINADGTINADEFK 538
             F   N +Q++   +   +D N+ + APTG+GKT  A L   + +  H       N  + K
Sbjct:  1132 FSFFNAVQTQFFHTIYHTDTNIFVGAPTGSGKTMAAELATWRAL--H-------NYPKSK 1182

Query:   539 IIYVAPMRSLVQEMVGNFGKDEIHLLHDERGPVLEALIARTIRNIEA 585
             ++Y+APM++LV+E V ++G    H L +  G  +  L   T  +++A
Sbjct:  1183 VVYIAPMKALVKERVKDWG----HRLVEPMGISMIELTGDTNPDVKA 1225

 Score = 104 (41.7 bits), Expect = 6.3e-163, Sum P(5) = 6.3e-163
 Identities = 37/167 (22%), Positives = 68/167 (40%)

Query:  1466 EAIRLIQACVDVLSSNGWLSPAVAAMEVAQMITQAMWSKDSYLKQLPHFNADIIKRCTEK 1525
             + IR+IQ+ +DV +  G+    +  + + Q + QA +  + Y   LP  NA      +EK
Sbjct:  1727 QVIRIIQSYIDVSAELGYSHVCLQYISLMQCLKQACYPSEIYRASLPGLNAS-----SEK 1781

Query:  1526 GVETVFDIMXXXXXXXXXXXXXXXXXXADVARFCNRYPNIELSYEVLNKDRIXXXXXXXX 1585
                   +                     D+    N      +SY  +N + +        
Sbjct:  1782 EARDYLNKFAGNKTDELYQMLCNDPNVFDIESLVNSL----ISYPKMNIE-VSQSSSDKL 1836

Query:  1586 XXXLDREDEVTGP---VIAPFYPQKREEGWWVVIGDPKTNSLLSIKR 1629
                L R ++   P   + AP +P+ + EG++V+I D +T  L +I+R
Sbjct:  1837 LLYLRRLNQPLNPDFYIFAPLFPKPQSEGFFVLIIDSETQELFAIRR 1883

 Score = 73 (30.8 bits), Expect = 5.5e-65, Sum P(6) = 5.5e-65
 Identities = 25/81 (30%), Positives = 42/81 (51%)

Query:   761 PRGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNFGKDEIHLL 820
             P G+GKT  A L   + +  H       N  + K++Y+APM++LV+E V ++G    H L
Sbjct:  1158 PTGSGKTMAAELATWRAL--H-------NYPKSKVVYIAPMKALVKERVKDWG----HRL 1204

Query:   821 HDERGPVLEALIARTIRNIEA 841
              +  G  +  L   T  +++A
Sbjct:  1205 VEPMGISMIELTGDTNPDVKA 1225

 Score = 59 (25.8 bits), Expect = 2.8e-37, Sum P(4) = 2.8e-37
 Identities = 24/99 (24%), Positives = 51/99 (51%)

Query:   647 VMNDIV-YEKV---MEHAGRNQLLVSTLRVELTISPDFQWDEKLHGG--SEGFWILVEDV 700
             ++N ++ Y K+   +  +  ++LL+   R+   ++PDF     L     SEGF++L+  +
Sbjct:  1814 LVNSLISYPKMNIEVSQSSSDKLLLYLRRLNQPLNPDFYIFAPLFPKPQSEGFFVLI--I 1871

Query:   701 DSEVVLHHEYFLLK-SRYA--TDDHVVKFFVPVFEPLPP 736
             DSE     E F ++ + +A   +D  ++  + +   +PP
Sbjct:  1872 DSET---QELFAIRRASFAGRRNDDSIRLSLRISMDIPP 1907

 Score = 47 (21.6 bits), Expect = 3.4e-55, Sum P(4) = 3.4e-55
 Identities = 20/99 (20%), Positives = 42/99 (42%)

Query:   267 DAYWLQRRLSKIYDDAMVSQAKAGEVLNILKSAGDDRDAENQLVLLLGYDCFDFIKMLKK 326
             + Y + + L +I  +  ++      + N+LKS   + D    ++ LL   C +F ++  +
Sbjct:   782 NGYLIPKDLGRIASNYYINYQTVSTLNNLLKSKMSEAD----IIALLS-QCSEFSQIKSR 836

Query:   327 YRQMILYCTLLASSQSESERQKLRDTMSEDPALAKILRQ 365
               +       L S    S   +LRD++S       ++ Q
Sbjct:   837 ENEH----RELESLMENSSPCQLRDSISNTSGKVNVILQ 871

 Score = 41 (19.5 bits), Expect = 6.3e-163, Sum P(5) = 6.3e-163
 Identities = 16/58 (27%), Positives = 24/58 (41%)

Query:   267 DAYWLQRRLSKIYDDAMVS-QAKA--GEVLNILKSAGDDRDAENQLVLLLGYDCFDFI 321
             D  WLQ   ++I   +     A      V+  LK+  D    +  L+ L+G D  D I
Sbjct:    71 DLTWLQNCCNEISQSSSTELDASVLFEAVIMSLKATEDQCAIQEDLLNLVGLDHIDLI 128

 Score = 37 (18.1 bits), Expect = 2.4e-139, Sum P(5) = 2.4e-139
 Identities = 8/25 (32%), Positives = 14/25 (56%)

Query:   585 ATQEDVRLVGLSATLPNYKDVATLL 609
             A + DV L+ +  T+ NY +   L+
Sbjct:   304 AGKTDVALLAMLQTISNYVESMNLM 328

 Score = 37 (18.1 bits), Expect = 4.2e-97, Sum P(4) = 4.2e-97
 Identities = 8/25 (32%), Positives = 14/25 (56%)

Query:   841 ATQEDVRLVGLSATLPNYKDVATLL 865
             A + DV L+ +  T+ NY +   L+
Sbjct:   304 AGKTDVALLAMLQTISNYVESMNLM 328


>WB|WBGene00013189 [details] [associations]
            symbol:Y54E2A.4 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00382 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 OMA:FPGKHYC
            InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
            eggNOG:COG1204 HOGENOM:HOG000157749 GeneTree:ENSGT00640000091272
            GO:GO:0008026 EMBL:AL032646 RefSeq:NP_497060.2
            ProteinModelPortal:Q9XWI1 SMR:Q9XWI1 PaxDb:Q9XWI1
            EnsemblMetazoa:Y54E2A.4 GeneID:190256 KEGG:cel:CELE_Y54E2A.4
            UCSC:Y54E2A.4 CTD:190256 WormBase:Y54E2A.4 Uniprot:Q9XWI1
        Length = 2017

 Score = 802 (287.4 bits), Expect = 9.9e-158, Sum P(6) = 9.9e-158
 Identities = 166/457 (36%), Positives = 273/457 (59%)

Query:  1028 DRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQM 1087
             DR L+E  FA+ H+ VL  TATLAWGVNLPAH V+IKGT +++ EKG + +LG LDV Q+
Sbjct:   630 DRILMERCFAEGHVSVLFCTATLAWGVNLPAHAVVIKGTDVFDAEKGVFTDLGVLDVQQI 689

Query:  1088 LGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMISKLPDMLNAEIVLGTVQN 1147
              GRAGRPQ++ +G G++IT   ++  YL++L HQ P+ESQ  ++L D LNAE+ LGTV  
Sbjct:   690 FGRAGRPQFENEGHGIIITTRDKIDKYLTMLVHQNPIESQFYARLHDNLNAEVALGTVST 749

Query:  1148 LKDAVTWLGYTYLYIRMLRAPNLYGISHDALKEDPLLECHRADLIHTAALHLERSGLIKY 1207
             + + V WL YTY+Y R L+ P  YGI+++A++ DP L  H  ++I  AA+ L+++ +I++
Sbjct:   750 VDEGVEWLTYTYMYTRALKNPMAYGIAYNAIERDPNLRDHFGNVIREAAMQLDQNKMIRF 809

Query:  1208 DRKSGHMQVTELGRIASHYYCTHETMATYNQLLK----PT-----LSEIELFRVFSLSGE 1258
             D  + ++  T+LGRIAS++Y  +ET+   N+  K    P      + +  +  + S+S E
Sbjct:   810 DMATEYLNSTDLGRIASNFYVKYETIQLLNEAEKGVGLPVTFTSFMPDDMVIGLISMSTE 869

Query:  1259 FRHITVRXXXXXXXXXXXXRA-PIPIKES-TDEPSAKVNILLQAYISQLKLEGFALMSDM 1316
             F ++  R                + ++       + KVN+LLQ+ IS+      ALMS+ 
Sbjct:   870 FANLKCREEEIGDLEELMSYGCMMNVRGGGLASVAGKVNVLLQSLISRTSTRNSALMSEQ 929

Query:  1317 VFVTQSAARLMRAIFEIVLYRGWAQLADKALSLCKMVDRRMWQSMSPLRQFRXXXXXXXX 1376
             ++V Q+A RL RA+FE+VL  GW+Q A+  L + K V+++MW +   LRQF         
Sbjct:   930 LYVQQNAGRLCRAMFEMVLKNGWSQAANAFLGIAKCVEKQMWMNQCALRQFIQIINIPIT 989

Query:  1377 XXXXXNFPWER---LYDLGPNEIGELIRVPKLGKTIHKYVHQFPKLELATHIQPITRSTL 1433
                       R   L +L   ++G +      G  ++ Y+   P++++    +PIT + +
Sbjct:   990 WIEKIERKKARESDLLELSAKDLGYMFSCD--GDRLYTYLRYLPRMDVQAKFKPITYTIV 1047

Query:  1434 RVELTISPDFQWDEKLHG--GSEGFWILVEDVDSEAI 1468
             +VE+T++P F W++++HG  G + F++++E+++   I
Sbjct:  1048 QVEVTLTPTFIWNDQIHGKSGQQSFYLVLENLNENLI 1084

 Score = 498 (180.4 bits), Expect = 9.9e-158, Sum P(6) = 9.9e-158
 Identities = 105/221 (47%), Positives = 144/221 (65%)

Query:   815 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 874
             DE+HLLHDERGPV+E L+ART+R +E +Q  +R+VGLSATLPN+ DVA  LR+ P  GLF
Sbjct:   447 DEVHLLHDERGPVIETLVARTLRQVEMSQSGIRIVGLSATLPNFIDVARFLRVNPYKGLF 506

Query:   875 YFDNSFRPVALEQQYIGVTEKKALK-RFQVMNDIVYEKVMEHAGR-NQLLVFVHSRKETG 932
             +FD  FRPV L Q++IG  +    +    +M+++ Y++V++   R +Q+LVFVH+R  T 
Sbjct:   507 FFDGRFRPVPLTQKFIGTRKAGNFRDNLTLMDNVCYDEVVDFVKRGHQVLVFVHTRNGTA 566

Query:   933 KTARAIRDMCLEKDTLGQ---FLREGSASMEVLRTE-ADQV-KN-GELRDLLPYGFAIHH 986
             K   A    C     LGQ   FL +  AS + ++ + A  + +N  ++  L   G  IHH
Sbjct:   567 KLGEAF---CARASVLGQMDLFLPKDRASSKYIQADKAINICRNRAQISPLFQRGMGIHH 623

Query:   987 AGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
             AG+ R DR L+E  FA+ H+ VL  TATLAWGVNLPAH VV
Sbjct:   624 AGLCRQDRILMERCFAEGHVSVLFCTATLAWGVNLPAHAVV 664

 Score = 484 (175.4 bits), Expect = 3.1e-119, Sum P(5) = 3.1e-119
 Identities = 119/374 (31%), Positives = 188/374 (50%)

Query:   992 VDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVVDRTLVEDLFADRHIQVLVSTATLA 1051
             +D   +EDL A    + L  T     G++    +  +R +VE LF ++ IQVL++TATLA
Sbjct:  1447 MDMLELEDLMAAIKDENLKLTLPFGIGMHHAGLSAHERAIVEQLFIEKKIQVLIATATLA 1506

Query:  1052 WGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQMLGRAGRPQYDTKGEGVLITNHSEL 1111
             WG+N PAH VI+KGT+ ++ +KG++V+    DVLQM+GRAGRPQ+D     V+    ++ 
Sbjct:  1507 WGINCPAHLVIVKGTEYFDGKKGKYVDFPVTDVLQMMGRAGRPQFDDSAVAVIYVQDAKK 1566

Query:  1112 QYYLSLLNHQLPVESQMISKLPDMLNAEIVLGTVQNLKDAVTWLGYTYLYIRMLRAPNLY 1171
              +Y   L    PVES ++  LP+ +NAEI  GT+ + +  V +L  TYLY R+   PN Y
Sbjct:  1567 TFYKKFLYEPFPVESSLLPVLPNHVNAEISAGTIDSKQAIVEYLSKTYLYRRLFANPNYY 1626

Query:  1172 GISHDALKEDPLLECHRADLIHTAALHLERSGLIKYDRKSGHMQVTELGRIASHYYCTHE 1231
             G+  D+  E+ +L+     ++  +   L  S  I  D +   ++ T  GRIAS YY  HE
Sbjct:  1627 GLEEDS--EEAMLK-FITKIVDDSVAELLASECIHVDSEQDVIKPTPCGRIASVYYLQHE 1683

Query:  1232 TMATYNQLLKPTLSEIELFRVFSLSGEFRHITVRXXXXXXXXXXXXRAPIPIKESTDEPS 1291
             T+    + L    S   + ++ +   E+  I VR            +  I    S    S
Sbjct:  1684 TVRFLVKSLHSGCSVENMLKILTDVPEYAEIPVRHNEDLINTELQKKLRIRFSTSVMGTS 1743

Query:  1292 A-KVNILLQAYISQLKLEGFALMSDMVFVTQSAARLMRAIFEIVLYRGWAQLADKALSLC 1350
             A K ++L QA+  +  L      +D+  V     R+++A+ E+   + W       + L 
Sbjct:  1744 ACKAHLLFQAHFMRTVLPT-DYRTDLKSVLDQCIRILQAMREMARLKNWLSATMNIILLQ 1802

Query:  1351 KMVDRRMWQSMSPL 1364
             +M     W    PL
Sbjct:  1803 QMCHSARWHDDHPL 1816

 Score = 366 (133.9 bits), Expect = 1.0e-98, Sum P(8) = 1.0e-98
 Identities = 85/222 (38%), Positives = 126/222 (56%)

Query:   809 VGNFGKDEIHLLHDERGPVLEALIART---IRNIEATQEDVRLVGLSATLPNYKDVATLL 865
             VG    DE+HLL  +RG VLEA+++R     R    T+E VRL+GLS  L N  DVA  L
Sbjct:  1300 VGLIVLDEVHLLGVDRGAVLEAIVSRLKMITRRSHVTEEPVRLLGLSTALANAGDVAEWL 1359

Query:   866 RIKPETGLFYFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQLLVFV 925
              I P+   + F  S RPV +     G   +    R  +MN   Y+ ++ ++ R  +L+FV
Sbjct:  1360 GI-PDEACYNFRPSVRPVPISVHIQGFPGQHYCPRMGLMNKPAYKAILTYSPRKPVLIFV 1418

Query:   926 HSRKETGKTARAIRDMCLEKDTLGQFLREGSASMEVLRTEADQVKNGELRDLLPYGFAIH 985
              SR++T  TA A  ++ +      Q+L      +E L      +K+  L+  LP+G  +H
Sbjct:  1419 SSRRQTRLTALAFVNLLIADHNPKQWLNMDMLELEDLMAA---IKDENLKLTLPFGIGMH 1475

Query:   986 HAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
             HAG++  +R +VE LF ++ IQVL++TATLAWG+N PAH V+
Sbjct:  1476 HAGLSAHERAIVEQLFIEKKIQVLIATATLAWGINCPAHLVI 1517

 Score = 296 (109.3 bits), Expect = 1.3e-136, Sum P(6) = 1.3e-136
 Identities = 56/111 (50%), Positives = 81/111 (72%)

Query:   559 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 618
             DE+HLLHDERGPV+E L+ART+R +E +Q  +R+VGLSATLPN+ DVA  LR+ P  GLF
Sbjct:   447 DEVHLLHDERGPVIETLVARTLRQVEMSQSGIRIVGLSATLPNFIDVARFLRVNPYKGLF 506

Query:   619 YFDNSFRPVALEQQYIGVTEKKALK-RFQVMNDIVYEKVMEHAGR-NQLLV 667
             +FD  FRPV L Q++IG  +    +    +M+++ Y++V++   R +Q+LV
Sbjct:   507 FFDGRFRPVPLTQKFIGTRKAGNFRDNLTLMDNVCYDEVVDFVKRGHQVLV 557

 Score = 270 (100.1 bits), Expect = 9.9e-158, Sum P(6) = 9.9e-158
 Identities = 63/150 (42%), Positives = 90/150 (60%)

Query:   414 DLQFSSGSHFM---SNKRCELPDGSFRKQRKGYEEVHVPALKPKPMGPDETL--VPIDKL 468
             D +  +  H M   +  +  LP+GS R   K +E V+VP   P   G  E +  V +  +
Sbjct:   242 DARLQNVGHTMFDINGMKFALPEGSKRDTFKTHESVYVP---PSNKGDIEKIQHVYVKDM 298

Query:   469 PRYVQHAFEDFKTLNRIQSRLCKSALESDENLLLCAPTGAGKTNVALLCMLQEIGKHINA 528
                 Q  F+ F+ LN IQS + + A ++ ENLL+CAPTGAGKTN+A+L +L  I +H N+
Sbjct:   299 DELGQKGFKGFEKLNVIQSIVFEQAYKTKENLLICAPTGAGKTNIAMLTILNTIHEHQNS 358

Query:   529 DGTINADEFKIIYVAPMRSLVQEMVGNFGK 558
              G I  D+FKIIY+APM++L  EM  +FGK
Sbjct:   359 RGDIMKDDFKIIYIAPMKALATEMTESFGK 388

 Score = 164 (62.8 bits), Expect = 2.4e-84, Sum P(5) = 2.4e-84
 Identities = 43/118 (36%), Positives = 62/118 (52%)

Query:   553 VGNFGKDEIHLLHDERGPVLEALIART---IRNIEATQEDVRLVGLSATLPNYKDVATLL 609
             VG    DE+HLL  +RG VLEA+++R     R    T+E VRL+GLS  L N  DVA  L
Sbjct:  1300 VGLIVLDEVHLLGVDRGAVLEAIVSRLKMITRRSHVTEEPVRLLGLSTALANAGDVAEWL 1359

Query:   610 RIKPETGLFYFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQLLV 667
              I P+   + F  S RPV +     G   +    R  +MN   Y+ ++ ++ R  +L+
Sbjct:  1360 GI-PDEACYNFRPSVRPVPISVHIQGFPGQHYCPRMGLMNKPAYKAILTYSPRKPVLI 1416

 Score = 158 (60.7 bits), Expect = 5.0e-146, Sum P(6) = 5.0e-146
 Identities = 30/54 (55%), Positives = 40/54 (74%)

Query:   761 PRGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNFGK 814
             P GAGKTN+A+L +L  I +H N+ G I  D+FKIIY+APM++L  EM  +FGK
Sbjct:   335 PTGAGKTNIAMLTILNTIHEHQNSRGDIMKDDFKIIYIAPMKALATEMTESFGK 388

 Score = 133 (51.9 bits), Expect = 9.9e-158, Sum P(6) = 9.9e-158
 Identities = 27/76 (35%), Positives = 43/76 (56%)

Query:  1602 PFYPQKREEGWWVVIGDPKTNSLLSIKRLTLQQKAK--IKLDFVAP-NPGHHSYALYFMS 1658
             P +P+ ++ GW +V+G+   + +L+   +T     +   KLD  AP   G+H  A+  +S
Sbjct:  1941 PQWPKPKQAGWIIVVGNVSADMILNTTTVTGSHSTRSTAKLDIRAPATKGNHELAVLILS 2000

Query:  1659 DAYLGCDQEYKFSIDV 1674
             D YLG DQEY   +DV
Sbjct:  2001 DCYLGIDQEYTLRLDV 2016

 Score = 121 (47.7 bits), Expect = 1.2e-108, Sum P(7) = 1.2e-108
 Identities = 30/113 (26%), Positives = 68/113 (60%)

Query:   670 LRVELTISPDFQWDEKLHG--GSEGFWILVEDVDSEVVLHHEYF---LLK-SRYATDDHV 723
             ++VE+T++P F W++++HG  G + F++++E+++  +++H E      +K +R  T + V
Sbjct:  1047 VQVEVTLTPTFIWNDQIHGKSGQQSFYLVLENLNENLIIHQERIGIGKMKVNRQETQNLV 1106

Query:   724 VKFFVPVFE-PLPPQYFLRIVSDRWIGAETILPVSFR---LPRGAGKTNVALL 772
               F +P+ +  L   + LR+ S+ ++  + ++P+S     LP+   K++  LL
Sbjct:  1107 --FTIPIVDCQLTNNFQLRLASEYFVTDDVVVPMSLHNCILPKSF-KSHTDLL 1156

 Score = 116 (45.9 bits), Expect = 2.7e-68, Sum P(5) = 2.7e-68
 Identities = 32/96 (33%), Positives = 53/96 (55%)

Query:   463 VPIDKLPRYVQHAFEDFKTLNRIQSRLCKSALESDENLLLCAPTGAGKTNVALLCMLQEI 522
             +PI  L      A  +F   N IQ+++     ++D++ L+ APTG+GKT  A L M + +
Sbjct:  1161 LPIKTLKNSKFEAIYNFDYFNPIQAQVFFCLYKTDKSALIGAPTGSGKTLCAELAMFRLL 1220

Query:   523 GKHINADGTINADEFKIIYVAPMRSLVQEMVGNFGK 558
               H    G       K++Y+AP++SLV+E V ++ K
Sbjct:  1221 QDH---PG------MKVVYIAPLKSLVRERVDDWKK 1247

 Score = 75 (31.5 bits), Expect = 9.9e-158, Sum P(6) = 9.9e-158
 Identities = 17/56 (30%), Positives = 28/56 (50%)

Query:  1460 VEDVDSEAIRLIQACVDVLSSNGWLSPAVAAMEVAQMITQAMWSKDSYLKQLPHFN 1515
             ++ V  + IR++QA  ++     WLS  +  + + QM   A W  D  L  LPH +
Sbjct:  1768 LKSVLDQCIRILQAMREMARLKNWLSATMNIILLQQMCHSARWHDDHPLLCLPHLS 1823

 Score = 74 (31.1 bits), Expect = 1.2e-108, Sum P(7) = 1.2e-108
 Identities = 20/54 (37%), Positives = 31/54 (57%)

Query:   761 PRGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNFGK 814
             P G+GKT  A L M + +  H    G       K++Y+AP++SLV+E V ++ K
Sbjct:  1203 PTGSGKTLCAELAMFRLLQDH---PG------MKVVYIAPLKSLVRERVDDWKK 1247

 Score = 72 (30.4 bits), Expect = 2.6e-76, Sum P(5) = 2.6e-76
 Identities = 15/48 (31%), Positives = 25/48 (52%)

Query:  1463 VDSEAIRLIQACVDVLSSNGWLSPAVAAMEVAQMITQAMWSKDSYLKQ 1510
             V   A RL +A  +++  NGW   A A + +A+ + + MW     L+Q
Sbjct:   932 VQQNAGRLCRAMFEMVLKNGWSQAANAFLGIAKCVEKQMWMNQCALRQ 979

 Score = 57 (25.1 bits), Expect = 9.9e-158, Sum P(6) = 9.9e-158
 Identities = 21/84 (25%), Positives = 41/84 (48%)

Query:   292 VLNILKSAGDDRDAENQLVLLLGYDCFDFIKMLKKYRQMILYCTLLASSQSESERQKLRD 351
             +L +L S   D D + +L+ LLG + F+    + + R  I++      SQ  ++ +  R 
Sbjct:    92 LLQMLCSTRSDMDLQGELIDLLGVELFELAGDILEKRNKIVF---EVKSQELAKVEHARQ 148

Query:   352 TMSEDPALAKILRQLD---TGKNE 372
               ++ PA+   L+ +    T +NE
Sbjct:   149 AKAK-PAVPGFLQTVSVQSTSQNE 171

 Score = 51 (23.0 bits), Expect = 2.1e-145, Sum P(6) = 2.1e-145
 Identities = 22/86 (25%), Positives = 33/86 (38%)

Query:   413 EDLQFSSGSHFMSNKRCELPDGSFRKQRKGYEEVHVPALKPKPMGPDETLVPI-DKLPRY 471
             +++Q    S F+    CE     F +     E + +P + P   G      PI D L  Y
Sbjct:    25 QEIQIRFPSEFLEWSNCEAEQEGFSEAP---EALSLPQV-PSTSGSGSIFQPIADTLLIY 80

Query:   472 VQHAFEDFKTLNRIQSRLCKSALESD 497
                 FE     N +Q  LC +  + D
Sbjct:    81 FPDTFETISQ-NLLQM-LCSTRSDMD 104

 Score = 48 (22.0 bits), Expect = 0.00078, Sum P(3) = 0.00078
 Identities = 14/62 (22%), Positives = 31/62 (50%)

Query:   481 TLNRIQ-SRLCKSALESDENLLLCAP--TGAGKTNVALLCMLQEIGKHINADGTINADEF 537
             T+N I   ++C SA   D++ LLC P  +     ++     + ++  H+  + + + D+ 
Sbjct:  1795 TMNIILLQQMCHSARWHDDHPLLCLPHLSHEDARSIGDGMTIPQLQNHLEIEKSTSLDDA 1854

Query:   538 KI 539
             K+
Sbjct:  1855 KL 1856

 Score = 39 (18.8 bits), Expect = 2.4e-48, Sum P(4) = 2.4e-48
 Identities = 9/19 (47%), Positives = 10/19 (52%)

Query:   497 DENLLLCAPTGAGKTNVAL 515
             DENL L  P G G  +  L
Sbjct:  1461 DENLKLTLPFGIGMHHAGL 1479

 Score = 38 (18.4 bits), Expect = 4.3e-97, Sum P(6) = 4.3e-97
 Identities = 9/33 (27%), Positives = 17/33 (51%)

Query:   956 SASMEVLRTEADQVKNGELRDLLPYGFAIHHAG 988
             S S E    +  + + G+L +L+ YG  ++  G
Sbjct:   865 SMSTEFANLKCREEEIGDLEELMSYGCMMNVRG 897


>ASPGD|ASPL0000044033 [details] [associations]
            symbol:AN2482 species:162425 "Emericella nidulans"
            [GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005829 "cytosol" evidence=IEA] InterPro:IPR001650
            InterPro:IPR003593 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00382 SMART:SM00490 GO:GO:0005524
            EMBL:BN001307 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 KO:K01529 OMA:FPGKHYC InterPro:IPR004179
            Pfam:PF02889 SMART:SM00611 SMART:SM00973 eggNOG:COG1204
            HOGENOM:HOG000157749 GO:GO:0008026 OrthoDB:EOG4H75KM
            EMBL:AACD01000041 RefSeq:XP_660086.1 ProteinModelPortal:Q5BAE8
            EnsemblFungi:CADANIAT00009203 GeneID:2875191 KEGG:ani:AN2482.2
            Uniprot:Q5BAE8
        Length = 2015

 Score = 899 (321.5 bits), Expect = 2.1e-153, Sum P(5) = 2.1e-153
 Identities = 180/422 (42%), Positives = 258/422 (61%)

Query:  1049 TLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQMLGRAGRPQYDTKGEGVLITNH 1108
             TLAWGVNLPA  V+IKGTQ+YNP++G++V+LG LDVLQ+ GRAGRPQ+   G G + T H
Sbjct:   617 TLAWGVNLPAAAVVIKGTQLYNPQEGKFVDLGILDVLQIFGRAGRPQFQDTGIGFICTTH 676

Query:  1109 SELQYYLSLLNHQLPVESQMISKLPDMLNAEIVLGTVQNLKDAVTWLGYTYLYIRMLRAP 1168
              +L +YLS +  Q P+ES+  S+L D LNAEI LGTV ++ + V WLGY+YL++RM R P
Sbjct:   677 DKLNHYLSAVTSQQPIESRFSSRLVDNLNAEIALGTVTSISEGVQWLGYSYLFVRMKREP 736

Query:  1169 NLYGISHDALKEDPLLECHRADLIHTAALHLERSGLIKYDRKSGHMQVTELGRIASHYYC 1228
               YGI +  L +DP L   R  LI  AAL L++S +I Y+ K+  ++  ++GRIAS YY 
Sbjct:   737 RNYGIDYTELIDDPGLVLRRRQLIIQAALVLQKSQMIIYNEKTEELRAKDVGRIASQYYV 796

Query:  1229 THETMATYNQLLKPTLSEIELFRVFSLSGEFRHITVRXXXXXXXXXXXXRA-PIPIKEST 1287
                ++  +N+L++P   E ++ R+ S+SGEF +I  R             A    ++   
Sbjct:   797 LQTSIEIFNELMRPRSGEADVLRMISMSGEFDNIQSRENESKELTRLREEAVQTEVEGGN 856

Query:  1288 DEPSAKVNILLQAYISQLKLEGFALMSDMVFVTQSAARLMRAIFEIVLYRGWAQLADKAL 1347
             D   AK NILLQ+YIS+ K+E FAL+SD  +V Q+AAR+ RA+F I L R W       L
Sbjct:   857 DSAQAKTNILLQSYISRAKIEDFALVSDTGYVAQNAARICRALFMIALNRRWGYQCQVLL 916

Query:  1348 SLCKMVDRRMWQSMSPLRQFRXXXXXXXXXXXXX-NFPWERLYDLGPNEIGELIRVPKLG 1406
             S+CK ++++MW    P RQF                   E + D+   E+G+L+   K+G
Sbjct:   917 SMCKSIEKQMWPFDHPFRQFDLPQPILRNLEEKLPTSSVESMRDMETAELGQLVHNHKMG 976

Query:  1407 KTIHKYVHQFPKLELATHIQPITRSTLRVELTISPDFQWDEKLHGGSEGFWILVEDVDSE 1466
             KT+ K +  FP L +   I P+ R  LRV L + P+F W+++ HG SE +WI VE+ ++ 
Sbjct:   977 KTLAKLLDNFPTLSVEAEIAPLNRDVLRVRLMLYPEFTWNDRHHGASESYWIWVENSETS 1036

Query:  1467 AI 1468
              I
Sbjct:  1037 EI 1038

 Score = 492 (178.3 bits), Expect = 1.4e-151, Sum P(8) = 1.4e-151
 Identities = 114/361 (31%), Positives = 188/361 (52%)

Query:  1015 LAWGVNLPAHTVV--DRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPE 1072
             L++G+ L    +V  DR L E+LFA+  IQ+LV+T+TLAWGVNLPAH V++KGTQ ++ +
Sbjct:  1418 LSFGIGLHHAGLVESDRQLAEELFANNKIQILVATSTLAWGVNLPAHLVVVKGTQFFDAK 1477

Query:  1073 KGRWVELGALDVLQMLGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMISKL 1132
                + ++   DVLQMLGRAGRPQ+D+ G   + T  S+  +Y   L+   PVES +   L
Sbjct:  1478 TEGYKDMDLTDVLQMLGRAGRPQFDSSGIARIFTQDSKKAFYKHFLHTGFPVESTLHKVL 1537

Query:  1133 PDMLNAEIVLGTVQNLKDAVTWLGYTYLYIRMLRAPNLYGIS-----HDALKEDPLLECH 1187
              + L AE+  GT+   +DA+ +L +T+ + R+ + P+ YG+      H++L+   L +  
Sbjct:  1538 DNHLGAEVSAGTIATKQDALDYLTWTFFFRRLHKNPSYYGLEISADQHNSLEAQTLAQDF 1597

Query:  1188 RADLIHTAALHLERSGLIKYDRKSGHMQVTELGRIASHYYCTHETMATYNQLLKPTLSEI 1247
               DL+  +   L  S  I +D  +G +  T  G+I S+YY  H+T+       KP  S  
Sbjct:  1598 MIDLVDKSLSELSESSCIIFDSATGEVDPTPFGKIMSYYYLAHKTIRYLLSHAKPAPSFH 1657

Query:  1248 ELFRVFSLSGEFRHITVRXXXXXXXXXXXXRAPIPIKESTD----EPSAKVNILLQAYIS 1303
             ++      + EF  + VR              P+ +    D    +P  K  +LLQAY+S
Sbjct:  1658 DVLSWMCSATEFDELPVRHNEDLINAELSRNLPLAVDPMGDLPMWDPHVKAFLLLQAYMS 1717

Query:  1304 QLKLEGFALMSDMVFVTQSAARLMRAIFEIVLYRGWAQLADKALSLCKMVDRRMWQSMSP 1363
             ++ L     + D   V   + R+++A  + +   G+       ++L + +    W +  P
Sbjct:  1718 RIDLPISDYVGDQTSVLDQSIRIIQASIDAMAELGYTAACRTFITLLQCIKSARWPTDHP 1777

Query:  1364 L 1364
             L
Sbjct:  1778 L 1778

 Score = 447 (162.4 bits), Expect = 2.1e-153, Sum P(5) = 2.1e-153
 Identities = 104/216 (48%), Positives = 134/216 (62%)

Query:   815 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 874
             DE+H+LHDERG V+E+L+ART R +E+TQ  +R+VGLSATLPNY DVA  L++    GLF
Sbjct:   430 DEVHMLHDERGAVIESLVARTQRQVESTQSLIRIVGLSATLPNYVDVADFLKVNKMAGLF 489

Query:   875 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIV-YEKVMEHAGR-NQLLVFVHSRKETG 932
             +FD+SFRPV LEQ +IGV  K   K+ +   D V +EKV +   R +Q++VFVHSRK+T 
Sbjct:   490 FFDSSFRPVPLEQHFIGVKGKPGSKQSRDNIDTVTFEKVRDMLERGHQVMVFVHSRKDTV 549

Query:   933 KTARAIRDMCLEKDTLGQF-LREGSASMEVLRTEADQVKNGELRDLLPYGFAIHHAGMTR 991
              TAR ++ M ++      F   E       LR +    +  ELRDL   GF  HHAGM+R
Sbjct:   550 LTARMLKQMAVQDGCEALFSCHEHENYSNALR-DMKHARARELRDLFASGFGTHHAGMSR 608

Query:   992 VDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
              DR L+E               TLAWGVNLPA  VV
Sbjct:   609 SDRNLMEP--------------TLAWGVNLPAAAVV 630

 Score = 384 (140.2 bits), Expect = 1.4e-151, Sum P(8) = 1.4e-151
 Identities = 86/214 (40%), Positives = 128/214 (59%)

Query:   815 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 874
             DEIHLL  +RGP+LE +++R       ++  VRL+G+S    N  D+A  L +K   GL+
Sbjct:  1259 DEIHLLGGDRGPILEIIVSRMNYIASQSKGSVRLMGMSTACANASDLANWLGVKE--GLY 1316

Query:   875 YFDNSFRPVALEQQYIGVTEKKAL-KRFQVMNDIVYEKVMEHAGRNQLLVFVHSRKETGK 933
              F +S RPV LE    G  E++      Q MN   +  +  H+    ++VFV SR++T  
Sbjct:  1317 NFRHSVRPVPLEIYIDGFPEQRGFCPLMQSMNRPTFLAIKNHSPEKPVIVFVASRRQTRL 1376

Query:   934 TARAIRDMCLEKDTLGQFLREGSASMEVLRTEADQVKNGELRDLLPYGFAIHHAGMTRVD 993
             TA+ + + C  +D   +F+R    S + L+   ++VK+  LR+ L +G  +HHAG+   D
Sbjct:  1377 TAKDLINFCGMEDNPRRFVR---MSEDDLQLNLERVKDDALREALSFGIGLHHAGLVESD 1433

Query:   994 RTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
             R L E+LFA+  IQ+LV+T+TLAWGVNLPAH VV
Sbjct:  1434 RQLAEELFANNKIQILVATSTLAWGVNLPAHLVV 1467

 Score = 291 (107.5 bits), Expect = 1.4e-151, Sum P(8) = 1.4e-151
 Identities = 60/111 (54%), Positives = 81/111 (72%)

Query:   559 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 618
             DE+H+LHDERG V+E+L+ART R +E+TQ  +R+VGLSATLPNY DVA  L++    GLF
Sbjct:   430 DEVHMLHDERGAVIESLVARTQRQVESTQSLIRIVGLSATLPNYVDVADFLKVNKMAGLF 489

Query:   619 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIV-YEKVMEHAGR-NQLLV 667
             +FD+SFRPV LEQ +IGV  K   K+ +   D V +EKV +   R +Q++V
Sbjct:   490 FFDSSFRPVPLEQHFIGVKGKPGSKQSRDNIDTVTFEKVRDMLERGHQVMV 540

 Score = 265 (98.3 bits), Expect = 1.4e-151, Sum P(8) = 1.4e-151
 Identities = 42/90 (46%), Positives = 65/90 (72%)

Query:   670 LRVELTISPDFQWDEKLHGGSEGFWILVEDVDSEVVLHHEYFLLKSRYATDDHVVKFFVP 729
             LRV L + P+F W+++ HG SE +WI VE+ ++  + HHEYF+L  +   DDH + F +P
Sbjct:  1003 LRVRLMLYPEFTWNDRHHGASESYWIWVENSETSEIYHHEYFILSRKKLYDDHELNFTIP 1062

Query:   730 VFEPLPPQYFLRIVSDRWIGAETILPVSFR 759
             + +PLP Q ++R +SDRW+GAET+ P+SF+
Sbjct:  1063 LSDPLPNQIYVRAISDRWLGAETVTPISFQ 1092

 Score = 258 (95.9 bits), Expect = 2.1e-153, Sum P(5) = 2.1e-153
 Identities = 59/144 (40%), Positives = 85/144 (59%)

Query:   424 MSNKRCELPDGSFRKQRKGYEEVHVPALKPKPMGPDETLVPIDKLPRYVQHAFEDFKTLN 483
             ++ K   LP GS +     Y EV VPA K   +G  + LVPI  +    Q  F+ +KTLN
Sbjct:   228 LNGKSYGLPLGSRQIDEPKYTEVEVPASKVGTIGQQQKLVPISSMDGLCQGTFKGYKTLN 287

Query:   484 RIQSRLCKSALESDENLLLCAPTGAGKTNVALLCMLQEIGKHI--N-------ADGTINA 534
             R+QS L   A ++ EN+L+CAPTGAGKT+ A+L +L  +GK+   N        + ++  
Sbjct:   288 RMQSLLYDVAYKTSENMLICAPTGAGKTDAAMLTILNAVGKNTVPNPAEQPGATEFSVLV 347

Query:   535 DEFKIIYVAPMRSLVQEMVGNFGK 558
             D+FKI+YVAPM++L  E+    GK
Sbjct:   348 DDFKIVYVAPMKALAAEVTEKLGK 371

 Score = 152 (58.6 bits), Expect = 5.3e-77, Sum P(5) = 5.3e-77
 Identities = 38/110 (34%), Positives = 58/110 (52%)

Query:   559 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 618
             DEIHLL  +RGP+LE +++R       ++  VRL+G+S    N  D+A  L +K   GL+
Sbjct:  1259 DEIHLLGGDRGPILEIIVSRMNYIASQSKGSVRLMGMSTACANASDLANWLGVKE--GLY 1316

Query:   619 YFDNSFRPVALEQQYIGVTEKKAL-KRFQVMNDIVYEKVMEHAGRNQLLV 667
              F +S RPV LE    G  E++      Q MN   +  +  H+    ++V
Sbjct:  1317 NFRHSVRPVPLEIYIDGFPEQRGFCPLMQSMNRPTFLAIKNHSPEKPVIV 1366

 Score = 108 (43.1 bits), Expect = 1.1e-137, Sum P(5) = 1.1e-137
 Identities = 25/63 (39%), Positives = 38/63 (60%)

Query:   761 PRGAGKTNVALLCMLQEIGKHI--N-------ADGTINADEFKIIYVAPMRSLVQEMVGN 811
             P GAGKT+ A+L +L  +GK+   N        + ++  D+FKI+YVAPM++L  E+   
Sbjct:   309 PTGAGKTDAAMLTILNAVGKNTVPNPAEQPGATEFSVLVDDFKIVYVAPMKALAAEVTEK 368

Query:   812 FGK 814
              GK
Sbjct:   369 LGK 371

 Score = 102 (41.0 bits), Expect = 6.7e-85, Sum P(5) = 6.7e-85
 Identities = 36/119 (30%), Positives = 61/119 (51%)

Query:   440 RKGYEEVHVPALKPKPMGPDETLVPIDKLPRYVQHAFEDFKTLNRIQSRLCKSALESDEN 499
             R   E V+   L+ +P+ P   L    K P   +   + F+  N +Q++L      +  N
Sbjct:  1096 RPDTESVYTDLLELQPL-PISAL----KNPILEELYGQRFQYFNPMQTQLFHVLYHTAAN 1150

Query:   500 LLLCAPTGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNFGK 558
             +LL +PTG+GKT  A L M     +     G+      K++Y+APM++LV+E V ++G+
Sbjct:  1151 VLLGSPTGSGKTVAAELAMWWAFRER---PGS------KVVYIAPMKALVRERVMDWGR 1200

 Score = 74 (31.1 bits), Expect = 2.1e-153, Sum P(5) = 2.1e-153
 Identities = 35/178 (19%), Positives = 73/178 (41%)

Query:  1466 EAIRLIQACVDVLSSNGWLSPAVAAMEVAQMITQAMWSKDSYLKQLPHF----NADI-IK 1520
             ++IR+IQA +D ++  G+ +     + + Q I  A W  D  L  LP      N D   K
Sbjct:  1736 QSIRIIQASIDAMAELGYTAACRTFITLLQCIKSARWPTDHPLSILPGVDPSTNTDKDSK 1795

Query:  1521 RCTEKGVETVFDIMXXXXXXXXXXXXXXXXXXADVARFCNRYPNIELSYEVLNKDRIXXX 1580
                   + ++  +                   +   +  +  P + +S   L+ +R    
Sbjct:  1796 TRLPSSLTSLTSLPHGAITTLPGKLHLPASLHSQFTKATSYLPRLAVSVP-LSSER---- 1850

Query:  1581 XXXXXXXXLDREDEVTGP---VIAPFYPQKREEGWWVVI----GDPKTNSLLSIKRLT 1631
                     L R++  + P   + AP +P+ + EG+++++     D +   LL++KR++
Sbjct:  1851 ---GLSVSLTRKNHPSNPDFRIYAPRFPKPQTEGFFLLVCASKSDGQDGDLLALKRVS 1905

 Score = 68 (29.0 bits), Expect = 1.4e-151, Sum P(8) = 1.4e-151
 Identities = 19/54 (35%), Positives = 31/54 (57%)

Query:   761 PRGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNFGK 814
             P G+GKT  A L M     +     G+      K++Y+APM++LV+E V ++G+
Sbjct:  1156 PTGSGKTVAAELAMWWAFRER---PGS------KVVYIAPMKALVRERVMDWGR 1200

 Score = 61 (26.5 bits), Expect = 2.1e-153, Sum P(5) = 2.1e-153
 Identities = 17/68 (25%), Positives = 32/68 (47%)

Query:   267 DAYWLQRRLSKIYDD--AMVSQAKAGEVLNILKSAGDDRDAENQLVLLLGYDCFDFIKML 324
             D  WLQ+R   +      +     A +++  L +   D + +  L  ++G+D  DF+  L
Sbjct:    91 DQTWLQQRCQLLASQQPGVELNEVAQQIIAALATDSGDDELQMSLAEIVGFDDLDFVIEL 150

Query:   325 KKYRQMIL 332
               +R+ IL
Sbjct:   151 IAHRKEIL 158

 Score = 52 (23.4 bits), Expect = 4.3e-59, Sum P(4) = 4.3e-59
 Identities = 23/122 (18%), Positives = 44/122 (36%)

Query:  1459 LVED---VDSEAIRLIQACVDVLSSNGWLSPAVAAMEVAQMITQAMWSKDSYLKQLPHFN 1515
             LV D   V   A R+ +A   +  +  W       + + + I + MW  D   +Q     
Sbjct:   881 LVSDTGYVAQNAARICRALFMIALNRRWGYQCQVLLSMCKSIEKQMWPFDHPFRQFD-LP 939

Query:  1516 ADIIKRCTEKGVETVFDIMXXXXXXXXXXXXXXXXXXADVARFCNRYPNIELSYEV--LN 1573
               I++   EK   +  + M                    +A+  + +P + +  E+  LN
Sbjct:   940 QPILRNLEEKLPTSSVESMRDMETAELGQLVHNHKMGKTLAKLLDNFPTLSVEAEIAPLN 999

Query:  1574 KD 1575
             +D
Sbjct:  1000 RD 1001

 Score = 47 (21.6 bits), Expect = 1.9e-91, Sum P(6) = 1.9e-91
 Identities = 23/72 (31%), Positives = 31/72 (43%)

Query:   870 ETGLFYFDNSFRPVALEQQYI-GVTEKKALKRFQVMNDIVYEKVMEHAGRNQLLVFVHSR 928
             E  ++ FD+ FR   L Q  +  + EK      + M D      ME A   QL   VH+ 
Sbjct:   923 EKQMWPFDHPFRQFDLPQPILRNLEEKLPTSSVESMRD------METAELGQL---VHNH 973

Query:   929 KETGKTARAIRD 940
             K  GKT   + D
Sbjct:   974 K-MGKTLAKLLD 984

 Score = 45 (20.9 bits), Expect = 6.3e-150, Sum P(8) = 6.3e-150
 Identities = 15/56 (26%), Positives = 26/56 (46%)

Query:    91 SEGVDEMVGIIYRPKTQETRQTYEVLLSFIQEALGDQPRDILCGAADEVLTVLKND 146
             SEG+ E+  ++  P +++  QT+  L    Q     QP   L   A +++  L  D
Sbjct:    72 SEGIYEIDDLLSPPVSEQYDQTW--LQQRCQLLASQQPGVELNEVAQQIIAALATD 125

 Score = 45 (20.9 bits), Expect = 1.3e-41, Sum P(4) = 1.3e-41
 Identities = 11/31 (35%), Positives = 19/31 (61%)

Query:   724 VKFFVPVFEPLPPQYFLRIVSDRWIGAETIL 754
             VKF  P   P+P +  +R++SD + G E ++
Sbjct:  1947 VKF--PRDIPVPQRVNVRVISDSYPGMEWVV 1975

 Score = 39 (18.8 bits), Expect = 2.0e-125, Sum P(8) = 2.0e-125
 Identities = 22/75 (29%), Positives = 35/75 (46%)

Query:   614 ETGLFYFDNSFRPVALEQQYI-GVTEKKALKRFQVMNDI----VYEKVMEHA-GRN--QL 665
             E  ++ FD+ FR   L Q  +  + EK      + M D+    + + V  H  G+   +L
Sbjct:   923 EKQMWPFDHPFRQFDLPQPILRNLEEKLPTSSVESMRDMETAELGQLVHNHKMGKTLAKL 982

Query:   666 LVS--TLRVELTISP 678
             L +  TL VE  I+P
Sbjct:   983 LDNFPTLSVEAEIAP 997


>CGD|CAL0003134 [details] [associations]
            symbol:orf19.3980 species:5476 "Candida albicans" [GO:0042788
            "polysomal ribosome" evidence=IEA] [GO:0005829 "cytosol"
            evidence=IEA] [GO:0002181 "cytoplasmic translation" evidence=IEA]
            [GO:0006417 "regulation of translation" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00382
            SMART:SM00490 CGD:CAL0003134 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K01529
            InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
            eggNOG:COG1204 GO:GO:0008026 EMBL:AACQ01000012 EMBL:AACQ01000011
            RefSeq:XP_721889.1 RefSeq:XP_722050.1 ProteinModelPortal:Q5AK41
            STRING:Q5AK41 GeneID:3636313 GeneID:3636419 KEGG:cal:CaO19.11463
            KEGG:cal:CaO19.3980 Uniprot:Q5AK41
        Length = 1929

 Score = 890 (318.4 bits), Expect = 4.6e-133, Sum P(6) = 4.6e-133
 Identities = 197/544 (36%), Positives = 294/544 (54%)

Query:   929 KETGKTARAIRDMCLEKDTLGQFLREGSASMEVLRTEADQVKNGE--LRDLLPYGFA-IH 985
             K   K AR   D  +  + L  ++ +G   M  + +  D V      +R  + YG + I 
Sbjct:   478 KAGSKLARENIDK-VSYEKLADYINQGLQVMVFVHSRKDTVNTARTFIRMAVEYGESEIF 536

Query:   986 HAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVVDRTLVEDLFADRHIQVLV 1045
             +            +       + L       +GV+       DR L E +F    I+VL 
Sbjct:   537 NCSEADSYEKYKREASNKNRSKELKELFVHGFGVHHAGMLRSDRNLTEKMFESGAIKVLC 596

Query:  1046 STATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQMLGRAGRPQYDTKGEGVLI 1105
              TATLAWGVNLPA  VI+KGTQ+Y+ + G +V+LG  DV+Q+ GRAGRPQY+  G G+L 
Sbjct:   597 CTATLAWGVNLPAAVVIVKGTQVYDSKAGGFVDLGISDVIQIFGRAGRPQYEKFGTGILC 656

Query:  1106 TNHSELQYYLSLLNHQLPVESQMISKLPDMLNAEIVLGTVQNLKDAVTWLGYTYLYIRML 1165
             T   +L +Y+SLL  Q P+ES+   KL D LNAEI LGTV N+++AV WLGYTY+ +RM 
Sbjct:   657 TTSDKLDHYVSLLTQQHPIESKFGDKLIDNLNAEISLGTVTNVEEAVQWLGYTYMMVRMK 716

Query:  1166 RAPNLYGISHDALKEDPLLECHRADLIHTAALHLERSGLIKYDRKSGHMQVTELGRIASH 1225
             + P  YGI    L+EDP L   R +++ T A  L    +I +D  S      +LGRIAS 
Sbjct:   717 QNPFAYGIDWKELQEDPSLTNRRREMVFTCAKRLHHLQMIIFDENSEAFTPKDLGRIASD 776

Query:  1226 YYCTHETMATYNQLLKPTLSEIELFRVFSLSGEFRHITVRXXXXXXXXXXXXR-APIPIK 1284
             +Y    ++  +NQ++ P  +E ++  + S+S EF  I  R              AP  + 
Sbjct:   777 FYLLSNSVEIFNQMMNPLATEADILSMISMSSEFDSIKFREEESKELKQLVEEDAPCQVA 836

Query:  1285 ESTDEPSAKVNILLQAYISQLKLEGFALMSDMVFVTQSAARLMRAIFEIVLYRGWAQLAD 1344
                D P  K NILLQA++SQ  ++  AL+SD  +V Q++AR+ R++F I + R W +L +
Sbjct:   837 GDVDSPQGKTNILLQAFVSQAHIKDSALISDSNYVAQNSARICRSLFLIAMNRRWGKLMN 896

Query:  1345 KALSLCKMVDRRMWQSMSPLRQFRXXXXXXXXXXXXXNFPWERLYDLGPNEIGELIRVPK 1404
               LSLCK +D+R+W    P+ QF              N     L D+   E+G+L+   K
Sbjct:   897 IMLSLCKSIDKRIWAFEHPMTQFELPQPVLRNIKAK-NPSMLALRDMEAGELGDLVHNFK 955

Query:  1405 LGKTIHKYVHQFPKLELATHIQPITRSTLRVELTISPDFQWDEKLHGGSEGFWILVEDVD 1464
             +G  ++K + +FP +++ + I PIT + +RV + + PDF WD+K HG ++ FW+ VE+ D
Sbjct:   956 MGSILYKLIGKFPFIDIESEIFPITTNVMRVHVDLQPDFVWDDKYHGSAQFFWLTVEESD 1015

Query:  1465 SEAI 1468
                I
Sbjct:  1016 RSEI 1019

 Score = 503 (182.1 bits), Expect = 5.1e-103, Sum P(5) = 5.1e-103
 Identities = 112/243 (46%), Positives = 153/243 (62%)

Query:   815 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 874
             DE+HLLH++RG V+E L+ART+R +E+TQ  +R+VGLSATLPNY DVA  L +    G+F
Sbjct:   398 DEVHLLHEDRGSVIETLVARTLRQVESTQSMIRVVGLSATLPNYMDVADFLGVNRSVGMF 457

Query:   875 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIV-YEKVMEHAGRN-QLLVFVHSRKETG 932
             YFD SFRPV L+QQ +GV  K   K  +   D V YEK+ ++  +  Q++VFVHSRK+T 
Sbjct:   458 YFDQSFRPVPLQQQILGVRGKAGSKLARENIDKVSYEKLADYINQGLQVMVFVHSRKDTV 517

Query:   933 KTARAIRDMCLEKDTLGQFLREGSASMEVLRTEA-DQVKNGELRDLLPYGFAIHHAGMTR 991
              TAR    M +E      F    + S E  + EA ++ ++ EL++L  +GF +HHAGM R
Sbjct:   518 NTARTFIRMAVEYGESEIFNCSEADSYEKYKREASNKNRSKELKELFVHGFGVHHAGMLR 577

Query:   992 VDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVVDR-TLVEDLFADRHIQVLVSTATL 1050
              DR L E +F    I+VL  TATLAWGVNLPA  V+ + T V D  A   + + +S    
Sbjct:   578 SDRNLTEKMFESGAIKVLCCTATLAWGVNLPAAVVIVKGTQVYDSKAGGFVDLGISDVIQ 637

Query:  1051 AWG 1053
              +G
Sbjct:   638 IFG 640

 Score = 440 (159.9 bits), Expect = 2.2e-132, Sum P(7) = 2.2e-132
 Identities = 109/357 (30%), Positives = 180/357 (50%)

Query:  1014 TLAWGVNLPAHTVV--DRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNP 1071
             +L +G+ L    +V  DR +   LF    IQ+L++T+TLAWGVNLPAH VIIKGTQ ++ 
Sbjct:  1398 SLQFGMGLHHAGLVESDRQISHKLFEQGKIQILIATSTLAWGVNLPAHLVIIKGTQFFDA 1457

Query:  1072 EKGRWVELGALDVLQMLGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMISK 1131
             +   + ++   D+LQM+GRAGRP YDT G  ++ T  S+  +Y   LN   PVES +   
Sbjct:  1458 KIEAYRDMDLTDILQMMGRAGRPAYDTSGIAIVYTKESKKVFYKHFLNLGFPVESSLHKV 1517

Query:  1132 LPDMLNAEIVLGTVQNLKDAVTWLGYTYLYIRMLRAPNLYGISHDALKEDPLLECHRADL 1191
             L + + AEI  GT+   ++A+ +L +T+LY R    P  YGI  + + +  + + + A L
Sbjct:  1518 LDNHIGAEISAGTITTRQEAMDFLTWTFLYRRAHNNPTYYGI--EDISQYGISQ-YLAKL 1574

Query:  1192 IHTAALHLERSGLIKYDRKSGHMQVTELGRIASHYYCTHETMATYNQLLKPTLSEIELFR 1251
             I +   +L  S  + Y   S  +  T    I+S+YY +H TM  +   + P     +  R
Sbjct:  1575 IDSTIENLVESKCV-YTGGSDELHATPFLEISSYYYLSHLTMRNFVNNVTPDFEFRDCLR 1633

Query:  1252 VFSLSGEFRHITVRXXXXXXXXXXXXRAPIPIKESTDE----PSAKVNILLQAYISQLKL 1307
             V   + E+  +  R                P ++   E    P  K  +L+QAY+S+++L
Sbjct:  1634 VLCQATEYNELATRHGEELINMEMSQAMRYPAEDLNCEFIWDPHVKAYLLIQAYMSRVEL 1693

Query:  1308 EGFALMSDMVFVTQSAARLMRAIFEIVLYRGWAQLADKALSLCKMVDRRMWQSMSPL 1364
                    D + V   A R+++A  +     G+ ++    + L + + +R W    P+
Sbjct:  1694 PIADYAQDTISVLDQALRILQAYIDAAAELGYFKVVMSFIQLMQCIKQRYWYDDDPV 1750

 Score = 352 (129.0 bits), Expect = 2.2e-132, Sum P(7) = 2.2e-132
 Identities = 87/228 (38%), Positives = 128/228 (56%)

Query:   802 RSLVQEMVGNFGKDEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDV 861
             R  VQ+ V     DEIHLL  +RGP+LE +++R       T++ +RL+G+S  + N  D+
Sbjct:  1228 RKFVQQ-VSLVIMDEIHLLASDRGPILEMIVSRMNYISSQTKKPIRLLGMSTAVSNAFDM 1286

Query:   862 ATLLRIKPETGLFYFDNSFRPVALEQQYI-GVTEKKAL-KRFQVMNDIVYEKVMEHAGRN 919
             A  L +K   GLF F  S RPV L Q YI G  E  A     + MN   +  + +H+   
Sbjct:  1287 AGWLGVK--NGLFNFPQSVRPVPL-QMYIDGFPENLAFCPLMKTMNKPAFMAIKQHSPNK 1343

Query:   920 QLLVFVHSRKETGKTARAIRDMCLEKDTLGQFLREGSASMEVLRTEADQVKNGELRDLLP 979
              +L+FV SR++T  TA  +  +C  +    +FL+    S + L+   + VK+  LR  L 
Sbjct:  1344 PVLIFVASRRQTRLTALDLIHLCGMESNPRRFLK---ISDDELQDILENVKDDTLRLSLQ 1400

Query:   980 YGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
             +G  +HHAG+   DR +   LF    IQ+L++T+TLAWGVNLPAH V+
Sbjct:  1401 FGMGLHHAGLVESDRQISHKLFEQGKIQILIATSTLAWGVNLPAHLVI 1448

 Score = 283 (104.7 bits), Expect = 4.6e-133, Sum P(6) = 4.6e-133
 Identities = 57/111 (51%), Positives = 78/111 (70%)

Query:   559 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 618
             DE+HLLH++RG V+E L+ART+R +E+TQ  +R+VGLSATLPNY DVA  L +    G+F
Sbjct:   398 DEVHLLHEDRGSVIETLVARTLRQVESTQSMIRVVGLSATLPNYMDVADFLGVNRSVGMF 457

Query:   619 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIV-YEKVMEHAGRN-QLLV 667
             YFD SFRPV L+QQ +GV  K   K  +   D V YEK+ ++  +  Q++V
Sbjct:   458 YFDQSFRPVPLQQQILGVRGKAGSKLARENIDKVSYEKLADYINQGLQVMV 508

 Score = 248 (92.4 bits), Expect = 2.2e-132, Sum P(7) = 2.2e-132
 Identities = 55/146 (37%), Positives = 85/146 (58%)

Query:   665 LLVSTLRVELTISPDFQWDEKLHGGSEGFWILVEDVDSEVVLHHEYFLLKSRYATDDHVV 724
             +  + +RV + + PDF WD+K HG ++ FW+ VE+ D   +LH E F+L  +     H +
Sbjct:   979 ITTNVMRVHVDLQPDFVWDDKYHGSAQFFWLTVEESDRSEILHVEKFILHKKQLHSPHEM 1038

Query:   725 KFFVPVFEPLPPQYFLRIVSDRWIGAETILPVSFR-LPRGAGKTNVALLCMLQEI---GK 780
              F +P+ +PLP Q  +R+VSD WIG+ET+  VSF+ L R + +T    L  LQ +     
Sbjct:  1039 DFMIPLSDPLPAQVVVRVVSDSWIGSETVHAVSFQHLIRPSNETIKTDLLHLQPLPVTAL 1098

Query:   781 HINAD-GTINADEFKIIYVAPMRSLV 805
             H N D   I + +FK  Y  PM+++V
Sbjct:  1099 H-NPDVEQIYSSKFK--YFNPMQTMV 1121

 Score = 237 (88.5 bits), Expect = 4.6e-133, Sum P(6) = 4.6e-133
 Identities = 55/145 (37%), Positives = 87/145 (60%)

Query:   424 MSNKRCELPDGSFRKQRKGYEEVHVPALKPKPMG--PDETLVPIDKLPRYVQHAFEDFKT 481
             ++ K+  LP G+ R     +EE+ +P  + KP     ++ LV I  L    Q  F+++K 
Sbjct:   195 ITGKKFALPQGTTRDSYATHEELVIPYPENKPNKWISEKNLVKISDLDFLCQGTFKNYKN 254

Query:   482 LNRIQSRLCKSALESDENLLLCAPTGAGKTNVALLCMLQEIGKHINA----DGTINAD-- 535
             LN++QS +   A  ++EN+L+CAPTGAGKT+VALL +L  I + +      DG ++ D  
Sbjct:   255 LNKMQSLVYPVAYNTNENMLVCAPTGAGKTDVALLTILHTINQFVTETVTEDGDVSVDID 314

Query:   536 --EFKIIYVAPMRSLVQEMVGNFGK 558
               EFKI+YVAP+++L  E+V  + K
Sbjct:   315 YDEFKIVYVAPLKALAAEIVEKYSK 339

 Score = 163 (62.4 bits), Expect = 2.9e-67, Sum P(5) = 2.9e-67
 Identities = 45/124 (36%), Positives = 66/124 (53%)

Query:   546 RSLVQEMVGNFGKDEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDV 605
             R  VQ+ V     DEIHLL  +RGP+LE +++R       T++ +RL+G+S  + N  D+
Sbjct:  1228 RKFVQQ-VSLVIMDEIHLLASDRGPILEMIVSRMNYISSQTKKPIRLLGMSTAVSNAFDM 1286

Query:   606 ATLLRIKPETGLFYFDNSFRPVALEQQYI-GVTEKKAL-KRFQVMNDIVYEKVMEHAGRN 663
             A  L +K   GLF F  S RPV L Q YI G  E  A     + MN   +  + +H+   
Sbjct:  1287 AGWLGVK--NGLFNFPQSVRPVPL-QMYIDGFPENLAFCPLMKTMNKPAFMAIKQHSPNK 1343

Query:   664 QLLV 667
              +L+
Sbjct:  1344 PVLI 1347

 Score = 118 (46.6 bits), Expect = 1.6e-95, Sum P(5) = 1.6e-95
 Identities = 27/62 (43%), Positives = 39/62 (62%)

Query:   761 PRGAGKTNVALLCMLQEIGKHINA----DGTINAD----EFKIIYVAPMRSLVQEMVGNF 812
             P GAGKT+VALL +L  I + +      DG ++ D    EFKI+YVAP+++L  E+V  +
Sbjct:   278 PTGAGKTDVALLTILHTINQFVTETVTEDGDVSVDIDYDEFKIVYVAPLKALAAEIVEKY 337

Query:   813 GK 814
              K
Sbjct:   338 SK 339

 Score = 98 (39.6 bits), Expect = 5.0e-41, Sum P(4) = 5.0e-41
 Identities = 47/190 (24%), Positives = 82/190 (43%)

Query:   463 VPIDKL--PRYVQHAFEDFKTLNRIQSRLCKSALESDENLLLCAPTGAGKTNVALLCMLQ 520
             +P+  L  P   Q     FK  N +Q+ +  S   ++ ++ + +PTG+GKT VA L +  
Sbjct:  1093 LPVTALHNPDVEQIYSSKFKYFNPMQTMVFHSLYNTNSSVFVGSPTGSGKTVVAELAIWH 1152

Query:   521 EIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNFG----KDEIHLLHDERGPVLEALI 576
                +  ++         K++Y+APM++LV+E V ++     K+  H L +  G  L  + 
Sbjct:  1153 AFNEFPSS---------KVVYIAPMKALVRERVDDWRERICKNTSHRLVELTGDSLPTIQ 1203

Query:   577 ARTIRNIEATQEDVRLVGLSATLPNYKDVATL-LRIKPETGLFYFDNS--FRPVALEQQY 633
                  +I  T  + +  G+S      K V  + L I  E  L   D       +     Y
Sbjct:  1204 EVKEADIIITTPE-KFDGISRNWQTRKFVQQVSLVIMDEIHLLASDRGPILEMIVSRMNY 1262

Query:   634 IGVTEKKALK 643
             I    KK ++
Sbjct:  1263 ISSQTKKPIR 1272

 Score = 71 (30.1 bits), Expect = 4.6e-133, Sum P(6) = 4.6e-133
 Identities = 13/47 (27%), Positives = 26/47 (55%)

Query:  1466 EAIRLIQACVDVLSSNGWLSPAVAAMEVAQMITQAMWSKDSYLKQLP 1512
             +A+R++QA +D  +  G+    ++ +++ Q I Q  W  D  +  LP
Sbjct:  1708 QALRILQAYIDAAAELGYFKVVMSFIQLMQCIKQRYWYDDDPVSALP 1754

 Score = 69 (29.3 bits), Expect = 4.6e-82, Sum P(6) = 4.6e-82
 Identities = 37/146 (25%), Positives = 61/146 (41%)

Query:   761 PRGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNFG----KDE 816
             P G+GKT VA L +     +  ++         K++Y+APM++LV+E V ++     K+ 
Sbjct:  1137 PTGSGKTVVAELAIWHAFNEFPSS---------KVVYIAPMKALVRERVDDWRERICKNT 1187

Query:   817 IHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATL-LRIKPETGLFY 875
              H L +  G  L  +      +I  T  + +  G+S      K V  + L I  E  L  
Sbjct:  1188 SHRLVELTGDSLPTIQEVKEADIIITTPE-KFDGISRNWQTRKFVQQVSLVIMDEIHLLA 1246

Query:   876 FDNS--FRPVALEQQYIGVTEKKALK 899
              D       +     YI    KK ++
Sbjct:  1247 SDRGPILEMIVSRMNYISSQTKKPIR 1272

 Score = 54 (24.1 bits), Expect = 4.6e-133, Sum P(6) = 4.6e-133
 Identities = 14/50 (28%), Positives = 26/50 (52%)

Query:  1599 VIAPFYPQKREEGWWVVIGDPKTNSLL--SIKRLTLQQKAKIKLDFVAPN 1646
             V  P +P+ + E W+V++ D +   LL  +  RL+  +K  +  D   P+
Sbjct:  1854 VYCPHFPKPQRESWFVILHDGEELHLLKRASPRLS-NKKGIVACDLDIPD 1902

 Score = 51 (23.0 bits), Expect = 4.6e-133, Sum P(6) = 4.6e-133
 Identities = 16/57 (28%), Positives = 30/57 (52%)

Query:   292 VLNILKSAGDDRDAENQLVLLLGYDCFDFI-KMLKKYRQMILYCTLLASSQSESERQ 347
             V ++L  +  D + ++ L  +LG+D FD I K+++  R    + T  +S    SE +
Sbjct:   102 VKSLLLQSPTDEELQSSLFDILGFDEFDLISKIIQNKRA---FATRESSGLMSSEER 155

 Score = 50 (22.7 bits), Expect = 1.2e-129, Sum P(5) = 1.2e-129
 Identities = 12/65 (18%), Positives = 34/65 (52%)

Query:  1612 WWVVIGDPKTNSLLSIKRLTLQQK---AKIKLDFVAP--NPGHHSYALYFMSDAYLGCDQ 1666
             +W+ + +   + +L +++  L +K   +  ++DF+ P  +P      +  +SD+++G + 
Sbjct:  1007 FWLTVEESDRSEILHVEKFILHKKQLHSPHEMDFMIPLSDPLPAQVVVRVVSDSWIGSET 1066

Query:  1667 EYKFS 1671
              +  S
Sbjct:  1067 VHAVS 1071


>SGD|S000003503 [details] [associations]
            symbol:SLH1 "Putative RNA helicase related to Ski2p"
            species:4932 "Saccharomyces cerevisiae" [GO:0051607 "defense
            response to virus" evidence=IEA] [GO:0006417 "regulation of
            translation" evidence=IEA;IGI;IMP] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0042788 "polysomal ribosome"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0002181
            "cytoplasmic translation" evidence=IGI] [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
            evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=ISS]
            InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00382
            SMART:SM00490 SGD:S000003503 GO:GO:0005524 GO:GO:0005737
            GO:GO:0006417 EMBL:BK006941 GO:GO:0003676 GO:GO:0051607
            GO:GO:0002181 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            KO:K01529 InterPro:IPR004179 Pfam:PF02889 SMART:SM00611
            SMART:SM00973 eggNOG:COG1204 HOGENOM:HOG000157749
            GeneTree:ENSGT00640000091272 GO:GO:0008026 GO:GO:0003724 KO:K02201
            RefSeq:NP_011793.3 GeneID:853194 KEGG:sce:YGR277C OMA:RKPTGEG
            OrthoDB:EOG4H75KM RefSeq:NP_011787.4 GeneID:853187 KEGG:sce:YGR271W
            EMBL:U35242 EMBL:Z73056 PIR:S64604 DIP:DIP-5563N IntAct:P53327
            MINT:MINT-516762 STRING:P53327 PaxDb:P53327 PeptideAtlas:P53327
            EnsemblFungi:YGR271W CYGD:YGR271w NextBio:973332
            Genevestigator:P53327 GermOnline:YGR271W Uniprot:P53327
        Length = 1967

 Score = 864 (309.2 bits), Expect = 7.2e-125, Sum P(5) = 7.2e-125
 Identities = 187/533 (35%), Positives = 295/533 (55%)

Query:   946 DTLGQFLREGSASMEVLRTEADQVKNGELRDLLPYGFAIHHAGMTRVD--------RTLV 997
             D L + ++ G   M  + +  + VK+   R+ +    + H   +   D        R+LV
Sbjct:   523 DKLSEMIQRGYQVMVFVHSRKETVKSA--RNFIKLAESNHEVDLFAPDPIEKDKYSRSLV 580

Query:   998 EDLFADRHIQVLVSTATLAWGVNLPAHTVVDRTLVEDLFADRHIQVLVSTATLAWGVNLP 1057
             ++   D+ ++ +       +G++       DR L E +F D  I+VL  TATLAWGVNLP
Sbjct:   581 KN--RDKDMKEIFQ---FGFGIHHAGMARSDRNLTEKMFKDGAIKVLCCTATLAWGVNLP 635

Query:  1058 AHTVIIKGTQIYNPEKGRWVELGALDVLQMLGRAGRPQYDT-KGEGVLITNHSELQYYLS 1116
             A  VIIKGTQ+Y+ +KG +++LG  DV+Q+ GR GRP + +  G G+L T++  L +Y+S
Sbjct:   636 ADCVIIKGTQVYDSKKGGFIDLGISDVIQIFGRGGRPGFGSANGTGILCTSNDRLDHYVS 695

Query:  1117 LLNHQLPVESQMISKLPDMLNAEIVLGTVQNLKDAVTWLGYTYLYIRMLRAPNLYGISHD 1176
             L+  Q P+ES+  SKL D LNAEI LG+V N+ +A+ WLGYTY+++RM + P  YGI  +
Sbjct:   696 LITQQHPIESRFGSKLVDNLNAEISLGSVTNVDEAIEWLGYTYMFVRMRKNPFTYGIDWE 755

Query:  1177 ALKEDPLLECHRADLIHTAALHLERSGLIKYDRKSGHMQVTELGRIASHYYCTHETMATY 1236
              +  DP L   R  +I  AA  L    +I +D  S H    +LGR++S +Y  +E++  +
Sbjct:   756 EIANDPQLYERRRKMIVVAARRLHALQMIVFDEVSMHFIAKDLGRVSSDFYLLNESVEIF 815

Query:  1237 NQLLKPTLSEIELFRVFSLSGEFRHITVRXXXXXXXXXXXXRA-PIPIKESTDEPSAKVN 1295
             NQ+  P  +E ++  + S+S EF  I  R             +    I    D P  K N
Sbjct:   816 NQMCDPRATEADVLSMISMSSEFDGIKFREEESKELKRLSDESVECQIGSQLDTPQGKAN 875

Query:  1296 ILLQAYISQLKLEGFALMSDMVFVTQSAARLMRAIFEIVLYRGWAQLADKALSLCKMVDR 1355
             +LLQAYISQ ++   AL SD  +V Q++ R+ RA+F I + R W + ++  L++CK +++
Sbjct:   876 VLLQAYISQTRIFDSALSSDSNYVAQNSVRICRALFLIGVNRRWGKFSNVMLNICKSIEK 935

Query:  1356 RMWQSMSPLRQFRXXXXXXXXXXXXXNFPWERLYDLGPNEIGELIRVPKLGKTIHKYVHQ 1415
             R+W    PL QF                  E L +L  +E+GEL+   K G  ++K + +
Sbjct:   936 RLWAFDHPLCQFDLPENIIRRIRDTKP-SMEHLLELEADELGELVHNKKAGSRLYKILSR 994

Query:  1416 FPKLELATHIQPITRSTLRVELTISPDFQWDEKLHGGSEGFWILVEDVDSEAI 1468
             FPK+ +   I PIT + +R+ + + PDF WD ++HG ++ FW+ VE+ D   I
Sbjct:   995 FPKINIEAEIFPITTNVMRIHIALGPDFVWDSRIHGDAQFFWVFVEESDKSQI 1047

 Score = 472 (171.2 bits), Expect = 2.6e-98, Sum P(5) = 2.6e-98
 Identities = 102/225 (45%), Positives = 143/225 (63%)

Query:   815 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 874
             DE+HLLH++RG V+E L+ART+R +E++Q  +R++GLSATLPN+ DVA  L +  + G+F
Sbjct:   427 DEVHLLHEDRGSVIETLVARTLRQVESSQSMIRIIGLSATLPNFMDVADFLGVNRQIGMF 486

Query:   875 YFDNSFRPVALEQQYIGVTEKKALKRFQVMND-IVYEKVMEHAGRN-QLLVFVHSRKETG 932
             YFD SFRP  LEQQ +G   K   ++ +   D + Y+K+ E   R  Q++VFVHSRKET 
Sbjct:   487 YFDQSFRPKPLEQQLLGCRGKAGSRQSKENIDKVAYDKLSEMIQRGYQVMVFVHSRKETV 546

Query:   933 KTARAIRDMCLEKDTLGQFLREGSASMEVLRTEADQVKNGE--LRDLLPYGFAIHHAGMT 990
             K+AR    +      +  F  +    +E  +     VKN +  ++++  +GF IHHAGM 
Sbjct:   547 KSARNFIKLAESNHEVDLFAPD---PIEKDKYSRSLVKNRDKDMKEIFQFGFGIHHAGMA 603

Query:   991 RVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVVDR-TLVED 1034
             R DR L E +F D  I+VL  TATLAWGVNLPA  V+ + T V D
Sbjct:   604 RSDRNLTEKMFKDGAIKVLCCTATLAWGVNLPADCVIIKGTQVYD 648

 Score = 433 (157.5 bits), Expect = 2.6e-98, Sum P(5) = 2.6e-98
 Identities = 122/401 (30%), Positives = 197/401 (49%)

Query:   984 IHHAGMTRVDRTLVEDLFADRHIQVLVSTAT-------LAWGVNLPAHTVV--DRTLVED 1034
             IH  GM    R  + ++  +  +Q  +S  T       L +G+ L    +V  DR++   
Sbjct:  1390 IHLCGMEDNPRRFL-NIDDEEELQYYLSQVTDDTLKLSLQFGIGLHHAGLVQKDRSISHQ 1448

Query:  1035 LFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQMLGRAGRP 1094
             LF    IQ+L++T+TLAWGVNLPAH VIIKGTQ ++ +   + ++   D+LQM+GRAGRP
Sbjct:  1449 LFQKNKIQILIATSTLAWGVNLPAHLVIIKGTQFFDAKIEGYRDMDLTDILQMMGRAGRP 1508

Query:  1095 QYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMISKLPDMLNAEIVLGTVQNLKDAVTW 1154
              YDT G  ++ T  S+  +Y   LN   PVES +   L D L AEI  G++ N ++A+ +
Sbjct:  1509 AYDTTGTAIVYTKESKKMFYKHFLNVGFPVESSLHKVLDDHLGAEITSGSITNKQEALDF 1568

Query:  1155 LGYTYLYIRMLRAPNLYGISHDALKEDPLLECHRADLIHTAALHLERSGLIKYDRKSGHM 1214
             L +T+L+ R    P  YGI  D      + E H + LI +   +L  S  +        +
Sbjct:  1569 LSWTFLFRRAHHNPTYYGIEDDTSTAG-VSE-HLSSLIDSTLENLRESQCVLLH--GDDI 1624

Query:  1215 QVTELGRIASHYYCTHETMATYNQLLKPTLSEI---ELFRVFSLSGEFRHITVRXXXXXX 1271
               T    I+S+YY +H T+    QLLK         E+ R  SL+ E+  + VR      
Sbjct:  1625 VATPFLSISSYYYISHLTI---RQLLKQIHDHATFQEVLRWLSLAVEYNELPVRGGEIIM 1681

Query:  1272 XXXXXXRAPIPIKES-TDE-------PSAKVNILLQAYISQLKLEGFALMSDMVFVTQSA 1323
                   ++   ++ + TDE       P  K  +LLQA++S++ L     + D V V   +
Sbjct:  1682 NEEMSQQSRYSVESTFTDEFELPMWDPHVKTFLLLQAHLSRVDLPIADYIQDTVSVLDQS 1741

Query:  1324 ARLMRAIFEIVLYRGWAQLADKALSLCKMVDRRMWQSMSPL 1364
              R+++A  ++    G+       + + + + +  W    P+
Sbjct:  1742 LRILQAYIDVASELGYFHTVLTMIKMMQCIKQGYWYEDDPV 1782

 Score = 354 (129.7 bits), Expect = 3.8e-70, Sum P(6) = 3.8e-70
 Identities = 84/227 (37%), Positives = 128/227 (56%)

Query:   802 RSLVQEMVGNFGKDEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDV 861
             R  VQ+ V     DEIHLL  +RGP+LE +++R       T++ VRL+G+S  + N  D+
Sbjct:  1254 RKFVQD-VSLIIMDEIHLLASDRGPILEMIVSRMNYISSQTKQPVRLLGMSTAVSNAYDM 1312

Query:   862 ATLLRIKPETGLFYFDNSFRPVALEQQYIGVTEKKAL-KRFQVMNDIVYEKVMEHAGRNQ 920
             A  L +K + GL+ F +S RPV L+    G  +  A     + MN  V+  + +H+    
Sbjct:  1313 AGWLGVK-DHGLYNFPSSVRPVPLKMYIDGFPDNLAFCPLMKTMNKPVFMAIKQHSPDKP 1371

Query:   921 LLVFVHSRKETGKTARAIRDMCLEKDTLGQFLREGSASMEVLRTEADQVKNGELRDLLPY 980
              L+FV SR++T  TA  +  +C  +D   +FL       E L+    QV +  L+  L +
Sbjct:  1372 ALIFVASRRQTRLTALDLIHLCGMEDNPRRFLNIDDE--EELQYYLSQVTDDTLKLSLQF 1429

Query:   981 GFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
             G  +HHAG+ + DR++   LF    IQ+L++T+TLAWGVNLPAH V+
Sbjct:  1430 GIGLHHAGLVQKDRSISHQLFQKNKIQILIATSTLAWGVNLPAHLVI 1476

 Score = 268 (99.4 bits), Expect = 7.2e-125, Sum P(5) = 7.2e-125
 Identities = 52/111 (46%), Positives = 77/111 (69%)

Query:   559 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 618
             DE+HLLH++RG V+E L+ART+R +E++Q  +R++GLSATLPN+ DVA  L +  + G+F
Sbjct:   427 DEVHLLHEDRGSVIETLVARTLRQVESSQSMIRIIGLSATLPNFMDVADFLGVNRQIGMF 486

Query:   619 YFDNSFRPVALEQQYIGVTEKKALKRFQVMND-IVYEKVMEHAGRN-QLLV 667
             YFD SFRP  LEQQ +G   K   ++ +   D + Y+K+ E   R  Q++V
Sbjct:   487 YFDQSFRPKPLEQQLLGCRGKAGSRQSKENIDKVAYDKLSEMIQRGYQVMV 537

 Score = 247 (92.0 bits), Expect = 1.1e-74, Sum P(5) = 1.1e-74
 Identities = 55/180 (30%), Positives = 97/180 (53%)

Query:   629 LEQQYIG--VTEKKALKR-FQVMNDIVYEKVMEHAGRNQLLVSTLRVELTISPDFQWDEK 685
             LE   +G  V  KKA  R +++++   + K+   A    +  + +R+ + + PDF WD +
Sbjct:   970 LEADELGELVHNKKAGSRLYKILSR--FPKINIEAEIFPITTNVMRIHIALGPDFVWDSR 1027

Query:   686 LHGGSEGFWILVEDVDSEVVLHHEYFLLKSRYATDDHVVKFFVPVFEPLPPQYFLRIVSD 745
             +HG ++ FW+ VE+ D   +LH E F+L  R   + H + F +P+ +PLPPQ  +++VSD
Sbjct:  1028 IHGDAQFFWVFVEESDKSQILHFEKFILNRRQLNNQHEMDFMIPLSDPLPPQVVVKVVSD 1087

Query:   746 RWIGAETILPVSFR-LPRGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSL 804
              WIG E+   +SF+ L R   +T    L  L+ +      +  I +  +   Y  PM+++
Sbjct:  1088 TWIGCESTHAISFQHLIRPFNETLQTKLLKLRPLPTSALQNPLIESI-YPFKYFNPMQTM 1146

 Score = 211 (79.3 bits), Expect = 7.2e-125, Sum P(5) = 7.2e-125
 Identities = 51/140 (36%), Positives = 85/140 (60%)

Query:   425 SNKRCELPDGSFRKQRKGYEEVHVPAL-KPKPMGPDET-LVPIDKLPRYVQHAFEDFKTL 482
             + ++  LP G+ R     +EE+ +PA  +        T L+ I  L  + +  F  ++TL
Sbjct:   230 AGQKFTLPVGTTRMSYNTHEEIIIPAADQASNKNYLYTKLLKISDLDHFCKTVFP-YETL 288

Query:   483 NRIQSRLCKSALESDENLLLCAPTGAGKTNVALLCMLQEIGKH--INADGTINA--DEFK 538
             N+IQS +   A +++EN+L+CAPTGAGKT++ALL ++  I +   +N +  I+   D+FK
Sbjct:   289 NQIQSLVYPVAYKTNENMLICAPTGAGKTDIALLTIINTIKQFSVVNGENEIDIQYDDFK 348

Query:   539 IIYVAPMRSLVQEMVGNFGK 558
             +IYVAP+++L  E+V  F K
Sbjct:   349 VIYVAPLKALAAEIVDKFSK 368

 Score = 162 (62.1 bits), Expect = 8.0e-66, Sum P(5) = 8.0e-66
 Identities = 42/123 (34%), Positives = 66/123 (53%)

Query:   546 RSLVQEMVGNFGKDEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDV 605
             R  VQ+ V     DEIHLL  +RGP+LE +++R       T++ VRL+G+S  + N  D+
Sbjct:  1254 RKFVQD-VSLIIMDEIHLLASDRGPILEMIVSRMNYISSQTKQPVRLLGMSTAVSNAYDM 1312

Query:   606 ATLLRIKPETGLFYFDNSFRPVALEQQYIGVTEKKAL-KRFQVMNDIVYEKVMEHAGRNQ 664
             A  L +K + GL+ F +S RPV L+    G  +  A     + MN  V+  + +H+    
Sbjct:  1313 AGWLGVK-DHGLYNFPSSVRPVPLKMYIDGFPDNLAFCPLMKTMNKPVFMAIKQHSPDKP 1371

Query:   665 LLV 667
              L+
Sbjct:  1372 ALI 1374

 Score = 119 (46.9 bits), Expect = 1.0e-88, Sum P(5) = 1.0e-88
 Identities = 25/58 (43%), Positives = 39/58 (67%)

Query:   761 PRGAGKTNVALLCMLQEIGKH--INADGTINA--DEFKIIYVAPMRSLVQEMVGNFGK 814
             P GAGKT++ALL ++  I +   +N +  I+   D+FK+IYVAP+++L  E+V  F K
Sbjct:   311 PTGAGKTDIALLTIINTIKQFSVVNGENEIDIQYDDFKVIYVAPLKALAAEIVDKFSK 368

 Score = 98 (39.6 bits), Expect = 3.8e-54, Sum P(5) = 3.8e-54
 Identities = 30/96 (31%), Positives = 50/96 (52%)

Query:   463 VPIDKLPRYVQHAFEDFKTLNRIQSRLCKSALESDENLLLCAPTGAGKTNVALLCMLQEI 522
             +P   L   +  +   FK  N +Q+    +   ++EN  + +PTG+GKT VA L +    
Sbjct:  1121 LPTSALQNPLIESIYPFKYFNPMQTMTFYTLYNTNENAFVGSPTGSGKTIVAELAIW--- 1177

Query:   523 GKHINADGTINADEFKIIYVAPMRSLVQEMVGNFGK 558
                 +A  T      KI+Y+APM++LV+E V ++ K
Sbjct:  1178 ----HAFKTFPGK--KIVYIAPMKALVRERVDDWRK 1207

 Score = 79 (32.9 bits), Expect = 7.2e-125, Sum P(5) = 7.2e-125
 Identities = 19/63 (30%), Positives = 33/63 (52%)

Query:  1466 EAIRLIQACVDVLSSNGWLSPAVAAMEVAQMITQAMWSKDSYLKQLPHFNADIIKRCT-- 1523
             +++R++QA +DV S  G+    +  +++ Q I Q  W +D  +  LP      IK  T  
Sbjct:  1740 QSLRILQAYIDVASELGYFHTVLTMIKMMQCIKQGYWYEDDPVSVLPGLQLRRIKDYTFS 1799

Query:  1524 EKG 1526
             E+G
Sbjct:  1800 EQG 1802

 Score = 66 (28.3 bits), Expect = 7.7e-79, Sum P(6) = 7.7e-79
 Identities = 21/54 (38%), Positives = 31/54 (57%)

Query:   761 PRGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNFGK 814
             P G+GKT VA L +        +A  T      KI+Y+APM++LV+E V ++ K
Sbjct:  1163 PTGSGKTIVAELAIW-------HAFKTFPGK--KIVYIAPMKALVRERVDDWRK 1207

 Score = 58 (25.5 bits), Expect = 1.1e-122, Sum P(5) = 1.1e-122
 Identities = 13/65 (20%), Positives = 33/65 (50%)

Query:  1612 WWVVIGDPKTNSLLSIKRLTLQQKA---KIKLDFVAP--NPGHHSYALYFMSDAYLGCDQ 1666
             +WV + +   + +L  ++  L ++    + ++DF+ P  +P      +  +SD ++GC+ 
Sbjct:  1035 FWVFVEESDKSQILHFEKFILNRRQLNNQHEMDFMIPLSDPLPPQVVVKVVSDTWIGCES 1094

Query:  1667 EYKFS 1671
              +  S
Sbjct:  1095 THAIS 1099

 Score = 52 (23.4 bits), Expect = 1.1e-58, Sum P(5) = 1.1e-58
 Identities = 15/42 (35%), Positives = 21/42 (50%)

Query:  1075 RWVELGALDVLQMLGRAGRPQYDTKGEGVLITNHSELQYYLS 1116
             R   L ALD++ + G    P+       + I +  ELQYYLS
Sbjct:  1380 RQTRLTALDLIHLCGMEDNPR-----RFLNIDDEEELQYYLS 1416

 Score = 47 (21.6 bits), Expect = 7.2e-125, Sum P(5) = 7.2e-125
 Identities = 13/68 (19%), Positives = 36/68 (52%)

Query:   267 DAYWLQRRLSKIYDDAMVSQAKAGEVLNILKSA--GDDRDAENQLVLLLGYDCFDFIKML 324
             +A  + +++ K+ ++A  + +    +  +L+       ++ E +L+  LG    D + +L
Sbjct:    93 NAVAVYKKIGKLINEAETTLSSNVLLETVLQMVYKHQKQELEKELLDFLGTGNIDLVSLL 152

Query:   325 KKYRQMIL 332
              ++R+MI+
Sbjct:   153 LQHRRMIV 160

 Score = 39 (18.8 bits), Expect = 4.9e-124, Sum P(5) = 4.9e-124
 Identities = 7/34 (20%), Positives = 19/34 (55%)

Query:    12 EYKANSNLVLQADVRLIERRSRDEATGEVCSLVG 45
             E   +SN++L+  ++++ +  + E   E+   +G
Sbjct:   109 ETTLSSNVLLETVLQMVYKHQKQELEKELLDFLG 142

 Score = 38 (18.4 bits), Expect = 1.0e-56, Sum P(5) = 1.0e-56
 Identities = 8/14 (57%), Positives = 10/14 (71%)

Query:   486 QSRLCKSALESDEN 499
             Q+R+  SAL SD N
Sbjct:   884 QTRIFDSALSSDSN 897


>GENEDB_PFALCIPARUM|PF14_0370 [details] [associations]
            symbol:PF14_0370 "RNA helicase, putative"
            species:5833 "Plasmodium falciparum" [GO:0004004 "ATP-dependent RNA
            helicase activity" evidence=ISS] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00382
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014187
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179
            Pfam:PF02889 SMART:SM00973 GO:GO:0004004 KO:K01509
            RefSeq:XP_001348544.1 ProteinModelPortal:Q8IL78
            EnsemblProtists:PF14_0370:mRNA GeneID:811952 KEGG:pfa:PF14_0370
            EuPathDB:PlasmoDB:PF3D7_1439100 HOGENOM:HOG000282165 OMA:GVAIHHA
            ProtClustDB:CLSZ2433245 Uniprot:Q8IL78
        Length = 2472

 Score = 506 (183.2 bits), Expect = 3.0e-94, Sum P(7) = 3.0e-94
 Identities = 107/309 (34%), Positives = 180/309 (58%)

Query:  1028 DRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQM 1087
             D+ LVE LF  +   VL  T+TLAWGVNLP HTVIIKGT  ++ E G+  ++  LD+ Q+
Sbjct:   767 DKILVESLFKKKVFNVLCCTSTLAWGVNLPVHTVIIKGTNYFSSESGKLEDMDILDINQI 826

Query:  1088 LGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMISKLPDMLNAEIVLGTVQN 1147
              GR GRPQY++ G  +LIT  ++L  Y+ LL +   +ES  +  + + LNAEI +GT++N
Sbjct:   827 FGRCGRPQYESHGHAILITERTKLYKYIKLLTNNTVIESNFLKNIENHLNAEISIGTIKN 886

Query:  1148 LKDAVTWLGYTYLYIRMLRAPNLYGISHDALKEDPLLECHRADLIHTAALHLERSGLIKY 1207
             ++D + WL YTYL+IRM + P LY +    +  D  L   R D+I  A  +L  + L++ 
Sbjct:   887 IEDGIKWLEYTYLFIRMKKNPYLYDVD---INNDLNLYNKRKDIIMKAIQNLSENKLVRR 943

Query:  1208 DRKSGHMQVTELGRIASHYYCTHETMATYNQLLKPTLSEIELFRVFSLSGEFRHITVRXX 1267
                +     T  G+IA+ YY  ++T+  + + ++   + IE+ +V S + EF +I +R  
Sbjct:   944 VLLTNDFIGTFYGQIAAKYYVDYKTIGMFAENVQNN-NYIEIIQVISKAKEFENIQIRNE 1002

Query:  1268 XXXXXXXXXXRAPIPIKESTDEP-SAKVNILLQAYISQLKLEGFALMSDMVFVTQSAARL 1326
                       +  I  KE  DE  +  + IL++ Y+ +L++  F+++ ++ ++ Q+  R+
Sbjct:  1003 DMKDFLYLKDKCDI--KEEYDESKNMTLRILIEVYLRRLQINNFSIICEINYIVQNIIRI 1060

Query:  1327 MRAIFEIVL 1335
             + A ++I L
Sbjct:  1061 LYAYYDICL 1069

 Score = 370 (135.3 bits), Expect = 3.0e-94, Sum P(7) = 3.0e-94
 Identities = 75/214 (35%), Positives = 126/214 (58%)

Query:   815 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 874
             DE+HLL+ +RG V+E +++R ++  E +Q   R++ +SATLPNYKDV   L+++ +   +
Sbjct:   590 DEVHLLNTDRGDVIETIVSRFLQYSETSQSIRRIMAMSATLPNYKDVRDFLKVENDM-CY 648

Query:   875 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRN-QLLVFVHSRKETGK 933
             YF+  +R + L++   G+ E+   K +   N   Y +++    ++ Q ++FV SR ET K
Sbjct:   649 YFNEKYRSIQLDKTLYGIHEENNNKLYIAKNIYTYNEIINSLKKDKQCIIFVCSRNETNK 708

Query:   934 TARAIRDMCLEKDTLGQFLREGSASMEVLRTEADQVKNGELRDLLPYGFAIHHAGMTRVD 993
             T   + +  L+ + +  F+       ++ + +  +  N  ++    YG  IHHAGM+R D
Sbjct:   709 TIEFLINHALKNNEIEYFVNNVYTDNDI-KKKIKKSNNLYIKQFYEYGCTIHHAGMSRSD 767

Query:   994 RTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
             + LVE LF  +   VL  T+TLAWGVNLP HTV+
Sbjct:   768 KILVESLFKKKVFNVLCCTSTLAWGVNLPVHTVI 801

 Score = 314 (115.6 bits), Expect = 2.2e-69, Sum P(9) = 2.2e-69
 Identities = 78/277 (28%), Positives = 145/277 (52%)

Query:   976 DLLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVST---ATLAWGVNLPAHTVV---DR 1029
             ++  Y    +++ ++  +R  V ++    ++ ++ +      L +G+ +  H  +   D+
Sbjct:  1769 EIYDYNLLFNNSKLSEEERKNVANILFQNYLNLIENEHLKEILKYGIGIH-HAGLNENDK 1827

Query:  1030 TLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQMLG 1089
             T+VE LF ++ IQ+L+ T+TLAWG+NLPA+ VIIKG + Y+ +  ++ ++   D+LQM+G
Sbjct:  1828 TIVEYLFLNKIIQILICTSTLAWGINLPAYLVIIKGNEFYDAKTKKYKDIPYTDLLQMIG 1887

Query:  1090 RAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMISKLPDMLNAEIVLGTVQNLK 1149
             RAGRPQ+D K   +L+          + L H + +ES ++    + +NAEI    + N +
Sbjct:  1888 RAGRPQFDDKALAILLVQEKRKNAIKNFLYHPMNIESNIMENFNEHINAEICSNVINNKE 1947

Query:  1150 DAVTWLGYTYLYIRMLRAPNLY--GISHDALKEDPLLECHRADLIHTAALHLERSGLIKY 1207
             D   +L  +Y + R+   P+ Y   + +    E+  L  H   +I+     +  +G IK+
Sbjct:  1948 DIFNYLTKSYYFKRLFSNPSYYIKEVQYVQFFENSKLSTHAKKIIYDHLNDVIENG-IKF 2006

Query:  1208 DRKSGHMQV-----------TELGRIASHYYCTHETM 1233
               ++  ++V           T LG IAS YY   ET+
Sbjct:  2007 LVQNKCLEVVQENYVLNYYATPLGHIASMYYIKCETV 2043

 Score = 185 (70.2 bits), Expect = 2.2e-69, Sum P(9) = 2.2e-69
 Identities = 50/140 (35%), Positives = 77/140 (55%)

Query:   815 DEIHLLHDE-RGPVLEALIARTIRNIE-ATQEDVRLVGLSATLPNYKDVATLLRIKPETG 872
             DEIHLL  E RG V+E L+ R  +N++    + +RL+GL+  + +  D+   L +K E  
Sbjct:  1497 DEIHLLGQENRGGVIEILVNR-FKNMQNELNKKIRLIGLTTVITSVDDLILWLDVK-ENY 1554

Query:   873 LFYFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQLLVFVHSRKETG 932
             LF F +S R V  +   +G T+K    R  VMN  V++ + ++A    +L+FV SR++T 
Sbjct:  1555 LFNFPSSCRIVPCKTHILGFTQKAYCNRMSVMNKNVFDAINQYAQTKNVLIFVSSRRQTR 1614

Query:   933 KTARAIRDMCLEKDTLGQFL 952
              TA  I  + L    L  FL
Sbjct:  1615 LTAYDIISLNLSSHNLN-FL 1633

 Score = 179 (68.1 bits), Expect = 1.8e-74, Sum P(7) = 1.8e-74
 Identities = 33/99 (33%), Positives = 62/99 (62%)

Query:   559 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 618
             DE+HLL+ +RG V+E +++R ++  E +Q   R++ +SATLPNYKDV   L+++ +   +
Sbjct:   590 DEVHLLNTDRGDVIETIVSRFLQYSETSQSIRRIMAMSATLPNYKDVRDFLKVENDM-CY 648

Query:   619 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVM 657
             YF+  +R + L++   G+ E+   K +   N   Y +++
Sbjct:   649 YFNEKYRSIQLDKTLYGIHEENNNKLYIAKNIYTYNEII 687

 Score = 179 (68.1 bits), Expect = 6.0e-55, Sum P(9) = 6.0e-55
 Identities = 30/59 (50%), Positives = 46/59 (77%)

Query:   969 VKNGELRDLLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
             ++N  L+++L YG  IHHAG+   D+T+VE LF ++ IQ+L+ T+TLAWG+NLPA+ V+
Sbjct:  1802 IENEHLKEILKYGIGIHHAGLNENDKTIVEYLFLNKIIQILICTSTLAWGINLPAYLVI 1860

 Score = 155 (59.6 bits), Expect = 3.0e-94, Sum P(7) = 3.0e-94
 Identities = 31/61 (50%), Positives = 46/61 (75%)

Query:   462 LVPIDKLPRYVQHAFEDFKTLNRIQSRLCKSALESDENLLLCAPTGAGKTNVALLCMLQE 521
             LV ++ LP + ++ F DF+  N +QS++  SA  S++NLL+CAPTG GKTN+ALL +LQ+
Sbjct:   321 LVSVNVLPFWHKYIF-DFEYFNYVQSKVFNSAFRSNKNLLVCAPTGCGKTNIALLVILQQ 379

Query:   522 I 522
             I
Sbjct:   380 I 380

 Score = 149 (57.5 bits), Expect = 1.8e-49, Sum P(7) = 1.8e-49
 Identities = 38/111 (34%), Positives = 62/111 (55%)

Query:   559 DEIHLLHDE-RGPVLEALIARTIRNIE-ATQEDVRLVGLSATLPNYKDVATLLRIKPETG 616
             DEIHLL  E RG V+E L+ R  +N++    + +RL+GL+  + +  D+   L +K E  
Sbjct:  1497 DEIHLLGQENRGGVIEILVNR-FKNMQNELNKKIRLIGLTTVITSVDDLILWLDVK-ENY 1554

Query:   617 LFYFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQLLV 667
             LF F +S R V  +   +G T+K    R  VMN  V++ + ++A    +L+
Sbjct:  1555 LFNFPSSCRIVPCKTHILGFTQKAYCNRMSVMNKNVFDAINQYAQTKNVLI 1605

 Score = 139 (54.0 bits), Expect = 3.3e-47, Sum P(6) = 3.3e-47
 Identities = 34/97 (35%), Positives = 56/97 (57%)

Query:   455 PMGPDETLVPIDKLPRYVQHAFEDFKTLNRIQSRLCKSALESDENLLLCAPTGAGKTNVA 514
             P+ P  T V    +P Y++  F  FK  N IQ+++  +   +DEN+LL APTG+GKT + 
Sbjct:  1348 PLTPLSTNVL--NIPNYIK--FFSFKYFNPIQTQMFHATFHTDENILLGAPTGSGKTVIG 1403

Query:   515 LLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQE 551
              LC+L+ +   +  +G       K +Y+ PM+++V E
Sbjct:  1404 ELCILRNL---LRCEGQ------KSVYICPMKAIVNE 1431

 Score = 88 (36.0 bits), Expect = 3.0e-94, Sum P(7) = 3.0e-94
 Identities = 19/32 (59%), Positives = 23/32 (71%)

Query:   527 NADGTINADEFKIIYVAPMRSLVQEMVGNFGK 558
             N  G IN+ EFKIIY+APM+SLV E+   F K
Sbjct:   495 NYCGYINSKEFKIIYIAPMKSLVFEITNLFRK 526

 Score = 88 (36.0 bits), Expect = 3.0e-94, Sum P(7) = 3.0e-94
 Identities = 19/32 (59%), Positives = 23/32 (71%)

Query:   783 NADGTINADEFKIIYVAPMRSLVQEMVGNFGK 814
             N  G IN+ EFKIIY+APM+SLV E+   F K
Sbjct:   495 NYCGYINSKEFKIIYIAPMKSLVFEITNLFRK 526

 Score = 70 (29.7 bits), Expect = 3.0e-94, Sum P(7) = 3.0e-94
 Identities = 14/59 (23%), Positives = 29/59 (49%)

Query:  1612 WWVVIGDPKTNSLLSIKRLTLQQKAKIK-LDFVAPN--PGHHSYALYFMSDAYLGCDQE 1667
             W+ ++ D + +  +SIKR       K+  + F   +   G +++ +Y  +D Y G + E
Sbjct:  2406 WFAILHDTEQDESISIKRFNNNNLKKVSVISFTLEDMEKGKYNFVIYIHNDTYYGIEHE 2464

 Score = 70 (29.7 bits), Expect = 2.2e-69, Sum P(9) = 2.2e-69
 Identities = 26/86 (30%), Positives = 41/86 (47%)

Query:   724 VKFF-VPVFEPLPPQYF-LRIVSDRWIGAETILPVSFRLPRGAGKTNVALLCMLQEIGKH 781
             +KFF    F P+  Q F     +D     E IL      P G+GKT +  LC+L+ +   
Sbjct:  1363 IKFFSFKYFNPIQTQMFHATFHTD-----ENIL---LGAPTGSGKTVIGELCILRNL--- 1411

Query:   782 INADGTINADEFKIIYVAPMRSLVQE 807
             +  +G       K +Y+ PM+++V E
Sbjct:  1412 LRCEGQ------KSVYICPMKAIVNE 1431

 Score = 68 (29.0 bits), Expect = 3.0e-94, Sum P(7) = 3.0e-94
 Identities = 19/80 (23%), Positives = 38/80 (47%)

Query:  1382 NFPWERLYDLGPNEIGELIRVPKLGKTIHKYVHQFPKLELATHIQPITRSTLRVELTIS- 1440
             N  +E +  L   E+   +R       I  Y +  P L++  +IQPIT++ +++ L +  
Sbjct:  1191 NLTYESIEHLSKKELLFFMRNEIYTNQILYYRNIIPNLDIDGYIQPITQTIMKINLNVKL 1250

Query:  1441 PDFQWDEKLHGGSEGFWILV 1460
              +  W ++ +   E F I +
Sbjct:  1251 TNTIWSDQWNDIIENFHIFL 1270

 Score = 67 (28.6 bits), Expect = 4.4e-69, Sum P(9) = 4.4e-69
 Identities = 18/78 (23%), Positives = 37/78 (47%)

Query:   670 LRVELTISPDFQWDEKLHGGSEGFWILVEDVDSEVVLHHEYFLLKSRYATDDHVVKFFVP 729
             L V+LT   +  W ++ +   E F I + +  +  +L+ + F +  +     H + F  P
Sbjct:  1246 LNVKLT---NTIWSDQWNDIIENFHIFLLNTLNNDILYFQKFSIHKKDRKKIHDISFEFP 1302

Query:   730 VFEPLPPQYFLRIVSDRW 747
             +   +PPQ  ++ +S  W
Sbjct:  1303 LSNQIPPQITVQFLSMNW 1320

 Score = 64 (27.6 bits), Expect = 7.4e-85, Sum P(7) = 7.4e-85
 Identities = 12/18 (66%), Positives = 15/18 (83%)

Query:   761 PRGAGKTNVALLCMLQEI 778
             P G GKTN+ALL +LQ+I
Sbjct:   363 PTGCGKTNIALLVILQQI 380

 Score = 56 (24.8 bits), Expect = 2.2e-69, Sum P(9) = 2.2e-69
 Identities = 24/107 (22%), Positives = 43/107 (40%)

Query:  1230 HETMAT-YNQLLKPTLSEIELFRVFSLSGEFRHITVRXXXXXXXXXXXXRAPIPIKESTD 1288
             ++ M T +  L   +L   ++F +   + EF  I +R            R  IP+    +
Sbjct:  2132 NDNMQTDFCTLKNDSLEFYDIFELVVQAKEFDDIPLRHNEDKYNVKL--RNQIPLDIDMN 2189

Query:  1289 EPSAKVNILLQAYISQLKLEGFALMSDMVFVTQSAARLMRAIFEIVL 1335
              P+ K  +LL +   +   E      D+  V    AR++ A  +I L
Sbjct:  2190 MPNVKTYLLLLSRFYECTYETVDYHIDLKLVMDQIARVINAFIDICL 2236

 Score = 48 (22.0 bits), Expect = 5.6e-92, Sum P(7) = 5.6e-92
 Identities = 22/78 (28%), Positives = 35/78 (44%)

Query:  1619 PKTNSLLSIKRLTLQQKAKIK-LDFVAPNP-----GHHSYALYFMSDAYLGCDQEYK-FS 1671
             P TNSL  IK +T  Q  K+K LD    N        + Y+L       +    +   F+
Sbjct:  2260 PNTNSLYIIKDITEYQIYKLKQLDIYNINQLIKFDKSYLYSLNIFDITQINFILQLPVFN 2319

Query:  1672 IDVSEYYSGGESDSDVEK 1689
             ++V  +Y    S+++ EK
Sbjct:  2320 MNVKLFYKDIHSENENEK 2337

 Score = 46 (21.3 bits), Expect = 3.0e-94, Sum P(7) = 3.0e-94
 Identities = 15/36 (41%), Positives = 18/36 (50%)

Query:   306 ENQLVLLLGYDCFDFIKMLKKYRQMILYCTLLASSQ 341
             EN LV LLG    DFI  + K ++ I     L S Q
Sbjct:   186 ENSLVDLLGDRFLDFIIQIIKNKEQIEKDIKLLSKQ 221

 Score = 41 (19.5 bits), Expect = 2.4e-84, Sum P(7) = 2.4e-84
 Identities = 16/65 (24%), Positives = 33/65 (50%)

Query:   532 INADE-FKIIYVAPMRSLVQEMVG-NFGKDEI-HLLHDERGPVLEALIARTIRNIEATQE 588
             IN +   K IY+  +  L+ E++     ++ + + L D  G      I + I+N E  ++
Sbjct:   154 INKNNTMKKIYINEINELLIEIIYITLTRENLENSLVDLLGDRFLDFIIQIIKNKEQIEK 213

Query:   589 DVRLV 593
             D++L+
Sbjct:   214 DIKLL 218

 Score = 41 (19.5 bits), Expect = 4.9e-45, Sum P(4) = 4.9e-45
 Identities = 16/65 (24%), Positives = 33/65 (50%)

Query:   788 INADE-FKIIYVAPMRSLVQEMVG-NFGKDEI-HLLHDERGPVLEALIARTIRNIEATQE 844
             IN +   K IY+  +  L+ E++     ++ + + L D  G      I + I+N E  ++
Sbjct:   154 INKNNTMKKIYINEINELLIEIIYITLTRENLENSLVDLLGDRFLDFIIQIIKNKEQIEK 213

Query:   845 DVRLV 849
             D++L+
Sbjct:   214 DIKLL 218

 Score = 39 (18.8 bits), Expect = 1.1e-67, Sum P(9) = 1.1e-67
 Identities = 11/31 (35%), Positives = 18/31 (58%)

Query:  1217 TELGRIASHYYCTHETMATYNQLLKPTLSEI 1247
             T L  ++  Y CT+ET+  Y+  LK  + +I
Sbjct:  2195 TYLLLLSRFYECTYETV-DYHIDLKLVMDQI 2224

 Score = 38 (18.4 bits), Expect = 5.2e-23, Sum P(6) = 5.2e-23
 Identities = 11/47 (23%), Positives = 24/47 (51%)

Query:   898 LKRFQVMNDIVYEKVMEHAGRNQLLVFVHSRKETGKTARAIRDMCLE 944
             LK+  V++  + +  ME  G+   ++++H+    G       D+C+E
Sbjct:  2429 LKKVSVISFTLED--MEK-GKYNFVIYIHNDTYYGIEHEVHIDLCIE 2472

 Score = 37 (18.1 bits), Expect = 7.6e-91, Sum P(7) = 7.6e-91
 Identities = 5/13 (38%), Positives = 10/13 (76%)

Query:  1667 EYKFSIDVSEYYS 1679
             ++K+S  ++ YYS
Sbjct:  2368 QHKYSFKINSYYS 2380


>UNIPROTKB|Q8IL78 [details] [associations]
            symbol:PF14_0370 "DEAD/DEAH box helicase, putative"
            species:36329 "Plasmodium falciparum 3D7" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR001650 InterPro:IPR003593
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00382 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            EMBL:AE014187 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR004179 Pfam:PF02889 SMART:SM00973 GO:GO:0004004
            KO:K01509 RefSeq:XP_001348544.1 ProteinModelPortal:Q8IL78
            EnsemblProtists:PF14_0370:mRNA GeneID:811952 KEGG:pfa:PF14_0370
            EuPathDB:PlasmoDB:PF3D7_1439100 HOGENOM:HOG000282165 OMA:GVAIHHA
            ProtClustDB:CLSZ2433245 Uniprot:Q8IL78
        Length = 2472

 Score = 506 (183.2 bits), Expect = 3.0e-94, Sum P(7) = 3.0e-94
 Identities = 107/309 (34%), Positives = 180/309 (58%)

Query:  1028 DRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQM 1087
             D+ LVE LF  +   VL  T+TLAWGVNLP HTVIIKGT  ++ E G+  ++  LD+ Q+
Sbjct:   767 DKILVESLFKKKVFNVLCCTSTLAWGVNLPVHTVIIKGTNYFSSESGKLEDMDILDINQI 826

Query:  1088 LGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMISKLPDMLNAEIVLGTVQN 1147
              GR GRPQY++ G  +LIT  ++L  Y+ LL +   +ES  +  + + LNAEI +GT++N
Sbjct:   827 FGRCGRPQYESHGHAILITERTKLYKYIKLLTNNTVIESNFLKNIENHLNAEISIGTIKN 886

Query:  1148 LKDAVTWLGYTYLYIRMLRAPNLYGISHDALKEDPLLECHRADLIHTAALHLERSGLIKY 1207
             ++D + WL YTYL+IRM + P LY +    +  D  L   R D+I  A  +L  + L++ 
Sbjct:   887 IEDGIKWLEYTYLFIRMKKNPYLYDVD---INNDLNLYNKRKDIIMKAIQNLSENKLVRR 943

Query:  1208 DRKSGHMQVTELGRIASHYYCTHETMATYNQLLKPTLSEIELFRVFSLSGEFRHITVRXX 1267
                +     T  G+IA+ YY  ++T+  + + ++   + IE+ +V S + EF +I +R  
Sbjct:   944 VLLTNDFIGTFYGQIAAKYYVDYKTIGMFAENVQNN-NYIEIIQVISKAKEFENIQIRNE 1002

Query:  1268 XXXXXXXXXXRAPIPIKESTDEP-SAKVNILLQAYISQLKLEGFALMSDMVFVTQSAARL 1326
                       +  I  KE  DE  +  + IL++ Y+ +L++  F+++ ++ ++ Q+  R+
Sbjct:  1003 DMKDFLYLKDKCDI--KEEYDESKNMTLRILIEVYLRRLQINNFSIICEINYIVQNIIRI 1060

Query:  1327 MRAIFEIVL 1335
             + A ++I L
Sbjct:  1061 LYAYYDICL 1069

 Score = 370 (135.3 bits), Expect = 3.0e-94, Sum P(7) = 3.0e-94
 Identities = 75/214 (35%), Positives = 126/214 (58%)

Query:   815 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 874
             DE+HLL+ +RG V+E +++R ++  E +Q   R++ +SATLPNYKDV   L+++ +   +
Sbjct:   590 DEVHLLNTDRGDVIETIVSRFLQYSETSQSIRRIMAMSATLPNYKDVRDFLKVENDM-CY 648

Query:   875 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRN-QLLVFVHSRKETGK 933
             YF+  +R + L++   G+ E+   K +   N   Y +++    ++ Q ++FV SR ET K
Sbjct:   649 YFNEKYRSIQLDKTLYGIHEENNNKLYIAKNIYTYNEIINSLKKDKQCIIFVCSRNETNK 708

Query:   934 TARAIRDMCLEKDTLGQFLREGSASMEVLRTEADQVKNGELRDLLPYGFAIHHAGMTRVD 993
             T   + +  L+ + +  F+       ++ + +  +  N  ++    YG  IHHAGM+R D
Sbjct:   709 TIEFLINHALKNNEIEYFVNNVYTDNDI-KKKIKKSNNLYIKQFYEYGCTIHHAGMSRSD 767

Query:   994 RTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
             + LVE LF  +   VL  T+TLAWGVNLP HTV+
Sbjct:   768 KILVESLFKKKVFNVLCCTSTLAWGVNLPVHTVI 801

 Score = 314 (115.6 bits), Expect = 2.2e-69, Sum P(9) = 2.2e-69
 Identities = 78/277 (28%), Positives = 145/277 (52%)

Query:   976 DLLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVST---ATLAWGVNLPAHTVV---DR 1029
             ++  Y    +++ ++  +R  V ++    ++ ++ +      L +G+ +  H  +   D+
Sbjct:  1769 EIYDYNLLFNNSKLSEEERKNVANILFQNYLNLIENEHLKEILKYGIGIH-HAGLNENDK 1827

Query:  1030 TLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQMLG 1089
             T+VE LF ++ IQ+L+ T+TLAWG+NLPA+ VIIKG + Y+ +  ++ ++   D+LQM+G
Sbjct:  1828 TIVEYLFLNKIIQILICTSTLAWGINLPAYLVIIKGNEFYDAKTKKYKDIPYTDLLQMIG 1887

Query:  1090 RAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMISKLPDMLNAEIVLGTVQNLK 1149
             RAGRPQ+D K   +L+          + L H + +ES ++    + +NAEI    + N +
Sbjct:  1888 RAGRPQFDDKALAILLVQEKRKNAIKNFLYHPMNIESNIMENFNEHINAEICSNVINNKE 1947

Query:  1150 DAVTWLGYTYLYIRMLRAPNLY--GISHDALKEDPLLECHRADLIHTAALHLERSGLIKY 1207
             D   +L  +Y + R+   P+ Y   + +    E+  L  H   +I+     +  +G IK+
Sbjct:  1948 DIFNYLTKSYYFKRLFSNPSYYIKEVQYVQFFENSKLSTHAKKIIYDHLNDVIENG-IKF 2006

Query:  1208 DRKSGHMQV-----------TELGRIASHYYCTHETM 1233
               ++  ++V           T LG IAS YY   ET+
Sbjct:  2007 LVQNKCLEVVQENYVLNYYATPLGHIASMYYIKCETV 2043

 Score = 185 (70.2 bits), Expect = 2.2e-69, Sum P(9) = 2.2e-69
 Identities = 50/140 (35%), Positives = 77/140 (55%)

Query:   815 DEIHLLHDE-RGPVLEALIARTIRNIE-ATQEDVRLVGLSATLPNYKDVATLLRIKPETG 872
             DEIHLL  E RG V+E L+ R  +N++    + +RL+GL+  + +  D+   L +K E  
Sbjct:  1497 DEIHLLGQENRGGVIEILVNR-FKNMQNELNKKIRLIGLTTVITSVDDLILWLDVK-ENY 1554

Query:   873 LFYFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQLLVFVHSRKETG 932
             LF F +S R V  +   +G T+K    R  VMN  V++ + ++A    +L+FV SR++T 
Sbjct:  1555 LFNFPSSCRIVPCKTHILGFTQKAYCNRMSVMNKNVFDAINQYAQTKNVLIFVSSRRQTR 1614

Query:   933 KTARAIRDMCLEKDTLGQFL 952
              TA  I  + L    L  FL
Sbjct:  1615 LTAYDIISLNLSSHNLN-FL 1633

 Score = 179 (68.1 bits), Expect = 1.8e-74, Sum P(7) = 1.8e-74
 Identities = 33/99 (33%), Positives = 62/99 (62%)

Query:   559 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 618
             DE+HLL+ +RG V+E +++R ++  E +Q   R++ +SATLPNYKDV   L+++ +   +
Sbjct:   590 DEVHLLNTDRGDVIETIVSRFLQYSETSQSIRRIMAMSATLPNYKDVRDFLKVENDM-CY 648

Query:   619 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVM 657
             YF+  +R + L++   G+ E+   K +   N   Y +++
Sbjct:   649 YFNEKYRSIQLDKTLYGIHEENNNKLYIAKNIYTYNEII 687

 Score = 179 (68.1 bits), Expect = 6.0e-55, Sum P(9) = 6.0e-55
 Identities = 30/59 (50%), Positives = 46/59 (77%)

Query:   969 VKNGELRDLLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
             ++N  L+++L YG  IHHAG+   D+T+VE LF ++ IQ+L+ T+TLAWG+NLPA+ V+
Sbjct:  1802 IENEHLKEILKYGIGIHHAGLNENDKTIVEYLFLNKIIQILICTSTLAWGINLPAYLVI 1860

 Score = 155 (59.6 bits), Expect = 3.0e-94, Sum P(7) = 3.0e-94
 Identities = 31/61 (50%), Positives = 46/61 (75%)

Query:   462 LVPIDKLPRYVQHAFEDFKTLNRIQSRLCKSALESDENLLLCAPTGAGKTNVALLCMLQE 521
             LV ++ LP + ++ F DF+  N +QS++  SA  S++NLL+CAPTG GKTN+ALL +LQ+
Sbjct:   321 LVSVNVLPFWHKYIF-DFEYFNYVQSKVFNSAFRSNKNLLVCAPTGCGKTNIALLVILQQ 379

Query:   522 I 522
             I
Sbjct:   380 I 380

 Score = 149 (57.5 bits), Expect = 1.8e-49, Sum P(7) = 1.8e-49
 Identities = 38/111 (34%), Positives = 62/111 (55%)

Query:   559 DEIHLLHDE-RGPVLEALIARTIRNIE-ATQEDVRLVGLSATLPNYKDVATLLRIKPETG 616
             DEIHLL  E RG V+E L+ R  +N++    + +RL+GL+  + +  D+   L +K E  
Sbjct:  1497 DEIHLLGQENRGGVIEILVNR-FKNMQNELNKKIRLIGLTTVITSVDDLILWLDVK-ENY 1554

Query:   617 LFYFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQLLV 667
             LF F +S R V  +   +G T+K    R  VMN  V++ + ++A    +L+
Sbjct:  1555 LFNFPSSCRIVPCKTHILGFTQKAYCNRMSVMNKNVFDAINQYAQTKNVLI 1605

 Score = 139 (54.0 bits), Expect = 3.3e-47, Sum P(6) = 3.3e-47
 Identities = 34/97 (35%), Positives = 56/97 (57%)

Query:   455 PMGPDETLVPIDKLPRYVQHAFEDFKTLNRIQSRLCKSALESDENLLLCAPTGAGKTNVA 514
             P+ P  T V    +P Y++  F  FK  N IQ+++  +   +DEN+LL APTG+GKT + 
Sbjct:  1348 PLTPLSTNVL--NIPNYIK--FFSFKYFNPIQTQMFHATFHTDENILLGAPTGSGKTVIG 1403

Query:   515 LLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQE 551
              LC+L+ +   +  +G       K +Y+ PM+++V E
Sbjct:  1404 ELCILRNL---LRCEGQ------KSVYICPMKAIVNE 1431

 Score = 88 (36.0 bits), Expect = 3.0e-94, Sum P(7) = 3.0e-94
 Identities = 19/32 (59%), Positives = 23/32 (71%)

Query:   527 NADGTINADEFKIIYVAPMRSLVQEMVGNFGK 558
             N  G IN+ EFKIIY+APM+SLV E+   F K
Sbjct:   495 NYCGYINSKEFKIIYIAPMKSLVFEITNLFRK 526

 Score = 88 (36.0 bits), Expect = 3.0e-94, Sum P(7) = 3.0e-94
 Identities = 19/32 (59%), Positives = 23/32 (71%)

Query:   783 NADGTINADEFKIIYVAPMRSLVQEMVGNFGK 814
             N  G IN+ EFKIIY+APM+SLV E+   F K
Sbjct:   495 NYCGYINSKEFKIIYIAPMKSLVFEITNLFRK 526

 Score = 70 (29.7 bits), Expect = 3.0e-94, Sum P(7) = 3.0e-94
 Identities = 14/59 (23%), Positives = 29/59 (49%)

Query:  1612 WWVVIGDPKTNSLLSIKRLTLQQKAKIK-LDFVAPN--PGHHSYALYFMSDAYLGCDQE 1667
             W+ ++ D + +  +SIKR       K+  + F   +   G +++ +Y  +D Y G + E
Sbjct:  2406 WFAILHDTEQDESISIKRFNNNNLKKVSVISFTLEDMEKGKYNFVIYIHNDTYYGIEHE 2464

 Score = 70 (29.7 bits), Expect = 2.2e-69, Sum P(9) = 2.2e-69
 Identities = 26/86 (30%), Positives = 41/86 (47%)

Query:   724 VKFF-VPVFEPLPPQYF-LRIVSDRWIGAETILPVSFRLPRGAGKTNVALLCMLQEIGKH 781
             +KFF    F P+  Q F     +D     E IL      P G+GKT +  LC+L+ +   
Sbjct:  1363 IKFFSFKYFNPIQTQMFHATFHTD-----ENIL---LGAPTGSGKTVIGELCILRNL--- 1411

Query:   782 INADGTINADEFKIIYVAPMRSLVQE 807
             +  +G       K +Y+ PM+++V E
Sbjct:  1412 LRCEGQ------KSVYICPMKAIVNE 1431

 Score = 68 (29.0 bits), Expect = 3.0e-94, Sum P(7) = 3.0e-94
 Identities = 19/80 (23%), Positives = 38/80 (47%)

Query:  1382 NFPWERLYDLGPNEIGELIRVPKLGKTIHKYVHQFPKLELATHIQPITRSTLRVELTIS- 1440
             N  +E +  L   E+   +R       I  Y +  P L++  +IQPIT++ +++ L +  
Sbjct:  1191 NLTYESIEHLSKKELLFFMRNEIYTNQILYYRNIIPNLDIDGYIQPITQTIMKINLNVKL 1250

Query:  1441 PDFQWDEKLHGGSEGFWILV 1460
              +  W ++ +   E F I +
Sbjct:  1251 TNTIWSDQWNDIIENFHIFL 1270

 Score = 67 (28.6 bits), Expect = 4.4e-69, Sum P(9) = 4.4e-69
 Identities = 18/78 (23%), Positives = 37/78 (47%)

Query:   670 LRVELTISPDFQWDEKLHGGSEGFWILVEDVDSEVVLHHEYFLLKSRYATDDHVVKFFVP 729
             L V+LT   +  W ++ +   E F I + +  +  +L+ + F +  +     H + F  P
Sbjct:  1246 LNVKLT---NTIWSDQWNDIIENFHIFLLNTLNNDILYFQKFSIHKKDRKKIHDISFEFP 1302

Query:   730 VFEPLPPQYFLRIVSDRW 747
             +   +PPQ  ++ +S  W
Sbjct:  1303 LSNQIPPQITVQFLSMNW 1320

 Score = 64 (27.6 bits), Expect = 7.4e-85, Sum P(7) = 7.4e-85
 Identities = 12/18 (66%), Positives = 15/18 (83%)

Query:   761 PRGAGKTNVALLCMLQEI 778
             P G GKTN+ALL +LQ+I
Sbjct:   363 PTGCGKTNIALLVILQQI 380

 Score = 56 (24.8 bits), Expect = 2.2e-69, Sum P(9) = 2.2e-69
 Identities = 24/107 (22%), Positives = 43/107 (40%)

Query:  1230 HETMAT-YNQLLKPTLSEIELFRVFSLSGEFRHITVRXXXXXXXXXXXXRAPIPIKESTD 1288
             ++ M T +  L   +L   ++F +   + EF  I +R            R  IP+    +
Sbjct:  2132 NDNMQTDFCTLKNDSLEFYDIFELVVQAKEFDDIPLRHNEDKYNVKL--RNQIPLDIDMN 2189

Query:  1289 EPSAKVNILLQAYISQLKLEGFALMSDMVFVTQSAARLMRAIFEIVL 1335
              P+ K  +LL +   +   E      D+  V    AR++ A  +I L
Sbjct:  2190 MPNVKTYLLLLSRFYECTYETVDYHIDLKLVMDQIARVINAFIDICL 2236

 Score = 48 (22.0 bits), Expect = 5.6e-92, Sum P(7) = 5.6e-92
 Identities = 22/78 (28%), Positives = 35/78 (44%)

Query:  1619 PKTNSLLSIKRLTLQQKAKIK-LDFVAPNP-----GHHSYALYFMSDAYLGCDQEYK-FS 1671
             P TNSL  IK +T  Q  K+K LD    N        + Y+L       +    +   F+
Sbjct:  2260 PNTNSLYIIKDITEYQIYKLKQLDIYNINQLIKFDKSYLYSLNIFDITQINFILQLPVFN 2319

Query:  1672 IDVSEYYSGGESDSDVEK 1689
             ++V  +Y    S+++ EK
Sbjct:  2320 MNVKLFYKDIHSENENEK 2337

 Score = 46 (21.3 bits), Expect = 3.0e-94, Sum P(7) = 3.0e-94
 Identities = 15/36 (41%), Positives = 18/36 (50%)

Query:   306 ENQLVLLLGYDCFDFIKMLKKYRQMILYCTLLASSQ 341
             EN LV LLG    DFI  + K ++ I     L S Q
Sbjct:   186 ENSLVDLLGDRFLDFIIQIIKNKEQIEKDIKLLSKQ 221

 Score = 41 (19.5 bits), Expect = 2.4e-84, Sum P(7) = 2.4e-84
 Identities = 16/65 (24%), Positives = 33/65 (50%)

Query:   532 INADE-FKIIYVAPMRSLVQEMVG-NFGKDEI-HLLHDERGPVLEALIARTIRNIEATQE 588
             IN +   K IY+  +  L+ E++     ++ + + L D  G      I + I+N E  ++
Sbjct:   154 INKNNTMKKIYINEINELLIEIIYITLTRENLENSLVDLLGDRFLDFIIQIIKNKEQIEK 213

Query:   589 DVRLV 593
             D++L+
Sbjct:   214 DIKLL 218

 Score = 41 (19.5 bits), Expect = 4.9e-45, Sum P(4) = 4.9e-45
 Identities = 16/65 (24%), Positives = 33/65 (50%)

Query:   788 INADE-FKIIYVAPMRSLVQEMVG-NFGKDEI-HLLHDERGPVLEALIARTIRNIEATQE 844
             IN +   K IY+  +  L+ E++     ++ + + L D  G      I + I+N E  ++
Sbjct:   154 INKNNTMKKIYINEINELLIEIIYITLTRENLENSLVDLLGDRFLDFIIQIIKNKEQIEK 213

Query:   845 DVRLV 849
             D++L+
Sbjct:   214 DIKLL 218

 Score = 39 (18.8 bits), Expect = 1.1e-67, Sum P(9) = 1.1e-67
 Identities = 11/31 (35%), Positives = 18/31 (58%)

Query:  1217 TELGRIASHYYCTHETMATYNQLLKPTLSEI 1247
             T L  ++  Y CT+ET+  Y+  LK  + +I
Sbjct:  2195 TYLLLLSRFYECTYETV-DYHIDLKLVMDQI 2224

 Score = 38 (18.4 bits), Expect = 5.2e-23, Sum P(6) = 5.2e-23
 Identities = 11/47 (23%), Positives = 24/47 (51%)

Query:   898 LKRFQVMNDIVYEKVMEHAGRNQLLVFVHSRKETGKTARAIRDMCLE 944
             LK+  V++  + +  ME  G+   ++++H+    G       D+C+E
Sbjct:  2429 LKKVSVISFTLED--MEK-GKYNFVIYIHNDTYYGIEHEVHIDLCIE 2472

 Score = 37 (18.1 bits), Expect = 7.6e-91, Sum P(7) = 7.6e-91
 Identities = 5/13 (38%), Positives = 10/13 (76%)

Query:  1667 EYKFSIDVSEYYS 1679
             ++K+S  ++ YYS
Sbjct:  2368 QHKYSFKINSYYS 2380


>UNIPROTKB|F1SU36 [details] [associations]
            symbol:SNRNP200 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] InterPro:IPR001650 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            GO:GO:0004386 InterPro:IPR004179 Pfam:PF02889 SMART:SM00611
            SMART:SM00973 GeneTree:ENSGT00640000091272 EMBL:CU896688
            Ensembl:ENSSSCT00000008906 OMA:QSSKKEF Uniprot:F1SU36
        Length = 553

 Score = 825 (295.5 bits), Expect = 3.1e-90, Sum P(2) = 3.1e-90
 Identities = 157/224 (70%), Positives = 180/224 (80%)

Query:  1461 EDVDSEAIRLIQACVDVLSSNGWLSPAVAAMEVAQMITQAMWSKDSYLKQLPHFNADIIK 1520
             E++ S+AIRLIQACVDVLSSNGWLSPA+AAME+AQM+TQAMWSKDSYLKQLPHF ++ IK
Sbjct:   330 EEILSKAIRLIQACVDVLSSNGWLSPALAAMELAQMVTQAMWSKDSYLKQLPHFTSEHIK 389

Query:  1521 RCTEKGVETVFDIMXXXXXXXXXXXXXXXXXXADVARFCNRYPNIELSYEVLNKDRIXXX 1580
             RCT+KGVE+VFDIM                  ADVARFCNRYPNIELSYEV++KD I   
Sbjct:   390 RCTDKGVESVFDIMEMEDEERNALLQLSDSQIADVARFCNRYPNIELSYEVVDKDSIRSG 449

Query:  1581 XXXXXXXXLDREDEVTGPVIAPFYPQKREEGWWVVIGDPKTNSLLSIKRLTLQQKAKIKL 1640
                     L+RE+EVTGPVIAP +PQKREEGWWVVIGD K+NSL+SIKRLTLQQKAK+KL
Sbjct:   450 GPVVVLVQLEREEEVTGPVIAPLFPQKREEGWWVVIGDAKSNSLISIKRLTLQQKAKVKL 509

Query:  1641 DFVAPNPGHHSYALYFMSDAYLGCDQEYKFSIDVSEYYSGGESD 1684
             DFVAP  G H+Y LYFMSDAY+GCDQEYKFS+DV E  +  +SD
Sbjct:   510 DFVAPATGAHNYTLYFMSDAYMGCDQEYKFSVDVKEAETDSDSD 553

 Score = 497 (180.0 bits), Expect = 4.4e-55, Sum P(2) = 4.4e-55
 Identities = 133/462 (28%), Positives = 231/462 (50%)

Query:  1027 VDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQ 1086
             ++R LVE LF+   IQV+V++ +L WG+N+ AH VII  TQ YN +   +V+    DVLQ
Sbjct:    44 MERRLVEQLFSSGAIQVVVASRSLCWGMNVAAHLVIIMDTQYYNGKIHAYVDYPIYDVLQ 103

Query:  1087 MLGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMISKLPDMLNAEIVLGTVQ 1146
             M+GRA RP  D +G  V++   S+  ++   L   LPVES +   + D  NAEIV  T++
Sbjct:   104 MVGRANRPLQDDEGRCVIMCQGSKKDFFKKFLYEPLPVESHLDHCMHDHFNAEIVTKTIE 163

Query:  1147 NLKDAVTWLGYTYLYIRMLRAPNLY---GISHDALKEDPLLECHRADLIHTAALHLERSG 1203
             N +DAV +L +T+LY RM + PN Y   GISH  L +      H ++L+      LE+S 
Sbjct:   164 NKQDAVDYLTWTFLYRRMTQNPNYYNLQGISHRHLSD------HLSELVEQTLSDLEQSK 217

Query:  1204 LIKYDRKSGHMQVTELGRIASHYYCTHETMATYNQLLKPTLSEIELFRVFSLSGEFRHIT 1263
              I  + +   +    LG IA++YY  + T+  ++  L        L  + S + E+ +I 
Sbjct:   218 CISIEDEMD-VAPLNLGMIAAYYYINYTTIELFSMSLNAKTKVRGLIEIISNAAEYENIP 276

Query:  1264 VRXXXXXXXXXXXXRAPIPIKEST-DEPSAKVNILLQAYISQLKLEGFALMSDMVFVTQS 1322
             +R            + P  +     ++P  K N+LLQA++S+++L    L SD   +   
Sbjct:   277 IRHHEDNLLRQLAQKVPHKLNNPKFNDPHVKTNLLLQAHLSRMQLSA-ELQSDTEEILSK 335

Query:  1323 AARLMRAIFEIVLYRGWAQLADKALSLCKMVDRRMWQSMSPLRQFRXXXXXXXXXXXXXN 1382
             A RL++A  +++   GW   A  A+ L +MV + MW   S L+Q                
Sbjct:   336 AIRLIQACVDVLSSNGWLSPALAAMELAQMVTQAMWSKDSYLKQLPHFTSEHIKRCTDKG 395

Query:  1383 FPWERLYDLGPNEIGELIRVPKLGKT----IHKYVHQFPKLELATHIQPITRSTLRV--E 1436
                E ++D+   E  E   + +L  +    + ++ +++P +EL+  +  + + ++R    
Sbjct:   396 V--ESVFDIMEMEDEERNALLQLSDSQIADVARFCNRYPNIELSYEV--VDKDSIRSGGP 451

Query:  1437 LTISPDFQWDEKLHGG----------SEGFWILVEDVDSEAI 1468
             + +    + +E++ G            EG+W+++ D  S ++
Sbjct:   452 VVVLVQLEREEEVTGPVIAPLFPQKREEGWWVVIGDAKSNSL 493

 Score = 116 (45.9 bits), Expect = 3.1e-90, Sum P(2) = 3.1e-90
 Identities = 22/61 (36%), Positives = 40/61 (65%)

Query:   967 DQVKNGELRDLLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTV 1026
             +++ +  L++ L  G    H G++ ++R LVE LF+   IQV+V++ +L WG+N+ AH V
Sbjct:    19 EKLGDSTLKETLLNGVGYLHEGLSPMERRLVEQLFSSGAIQVVVASRSLCWGMNVAAHLV 78

Query:  1027 V 1027
             +
Sbjct:    79 I 79


>UNIPROTKB|H9L351 [details] [associations]
            symbol:H9L351 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] InterPro:IPR001650 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            GO:GO:0004386 GeneTree:ENSGT00640000091272 EMBL:AADN02064073
            EMBL:AADN02064074 Ensembl:ENSGALT00000021750
            Ensembl:ENSGALT00000036125 Uniprot:H9L351
        Length = 254

 Score = 903 (322.9 bits), Expect = 1.6e-89, P = 1.6e-89
 Identities = 169/205 (82%), Positives = 187/205 (91%)

Query:  1025 TVVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDV 1084
             T VDRTLVEDLFAD+HIQVLVSTATLAWGVNLPAHTVIIKGTQ+Y+PEKGRW ELGALD+
Sbjct:    50 TRVDRTLVEDLFADKHIQVLVSTATLAWGVNLPAHTVIIKGTQVYSPEKGRWTELGALDI 109

Query:  1085 LQMLGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMISKLPDMLNAEIVLGT 1144
             LQMLGRAGRPQYDTKGEG+LIT+H ELQYYLSLLN QLP+ESQM+SKLPDMLNAE VLG 
Sbjct:   110 LQMLGRAGRPQYDTKGEGILITSHGELQYYLSLLNQQLPIESQMVSKLPDMLNAETVLGN 169

Query:  1145 VQNLKDAVTWLGYTYLYIRMLRAPNLYGISHDALKEDPLLECHRADLIHTAALHLERSGL 1204
             VQN KDAV WLGYTYLYIRMLR+P LYGISHD LK DPLL+  R DL+HTAAL L+++ L
Sbjct:   170 VQNAKDAVNWLGYTYLYIRMLRSPTLYGISHDDLKGDPLLDQRRLDLVHTAALMLDKNNL 229

Query:  1205 IKYDRKSGHMQVTELGRIASHYYCT 1229
             +KYD+K+G+ QVTELGRIASHYY T
Sbjct:   230 VKYDKKTGNFQVTELGRIASHYYIT 254

 Score = 407 (148.3 bits), Expect = 1.7e-36, P = 1.7e-36
 Identities = 79/87 (90%), Positives = 83/87 (95%)

Query:   941 MCLEKDTLGQFLREGSASMEVLRTEADQVKNGELRDLLPYGFAIHHAGMTRVDRTLVEDL 1000
             MCLEKDTLG FLREGSAS EVLRTEA+Q KN EL+DLLPYGFAIHHAGMTRVDRTLVEDL
Sbjct:     1 MCLEKDTLGLFLREGSASTEVLRTEAEQCKNLELKDLLPYGFAIHHAGMTRVDRTLVEDL 60

Query:  1001 FADRHIQVLVSTATLAWGVNLPAHTVV 1027
             FAD+HIQVLVSTATLAWGVNLPAHTV+
Sbjct:    61 FADKHIQVLVSTATLAWGVNLPAHTVI 87


>RGD|1584010 [details] [associations]
            symbol:Hfm1 "HFM1, ATP-dependent DNA helicase homolog (S.
            cerevisiae)" species:10116 "Rattus norvegicus" [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00490 RGD:1584010 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            InterPro:IPR004179 Pfam:PF02889 SMART:SM00973 GO:GO:0008026
            GeneTree:ENSGT00550000074822 IPI:IPI00766186
            Ensembl:ENSRNOT00000033794 UCSC:RGD:1584010 Uniprot:F1LWY1
        Length = 954

 Score = 427 (155.4 bits), Expect = 7.9e-68, Sum P(3) = 7.9e-68
 Identities = 144/490 (29%), Positives = 233/490 (47%)

Query:  1014 TLAWGVNL--PAHTVVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNP 1071
             TL +GV        + DR LVE+LF    + VL +T+TLA GVNLPAH V+IK T  Y  
Sbjct:   308 TLVYGVGYHHAGMELSDRKLVEELFTSGDLPVLFTTSTLAMGVNLPAHLVVIKSTMHYTG 367

Query:  1072 EKGRWVELGALDVLQMLGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMISK 1131
               G + E    D+LQM+GRAGRPQ+DT    V++T  S  + Y+ +L     VES +   
Sbjct:   368 --GAFEEYSETDILQMIGRAGRPQFDTTATAVIMTRLSTREKYVQMLACNDTVESSLHRH 425

Query:  1132 LPDMLNAEIVLGTVQNLKDAVTWLGYTYLYIRMLRAPNLYGISHDALKEDPLLECHRADL 1191
             L + LNAEIVL T+ ++  A+ W+  T LYIR L+ P+ YG     L +D + E    +L
Sbjct:   426 LIEHLNAEIVLHTITDVSIALDWIRSTLLYIRALKNPSHYGFI-SGLNKDGI-EAKLQEL 483

Query:  1192 IHTAALHLERSGLIKYDRKSGHMQVTELGRIASHYYCTHETMATYNQLL-KPTLSEIELF 1250
                    L    LIK D    + + TE GR+ + YY T ET+  +  +  K TLS+  L 
Sbjct:   484 CLKNLKDLSSLDLIKMDEDL-NFRSTEAGRLMAWYYITFETVKKFCAISGKETLSD--LI 540

Query:  1251 RVFSLSGEFRHITVRXXXXXXXXXXXX---RAPI--PIKESTDEPSAKVNILLQAYISQL 1305
              + S   EF  + +R               R  I  P++        KVN L+QA +  +
Sbjct:   541 SMISSCSEFLDVQLRISEKRTLNTLNKDPNRITIRFPMEGRIKTREMKVNCLIQAQLGCI 600

Query:  1306 KLEGFALMSDMVFVTQSAARLMRAIFEIVLYRG--WAQLADKALSLCKMVDRRMWQSMSP 1363
              ++ FAL  D   + ++ +R+ + + + V  +   +A L +  + L K    ++W++   
Sbjct:   601 PIQDFALTQDTSKIFRNGSRIAKWLSDFVTAQEQKFAVLLNSVI-LAKCFKCKLWENSQH 659

Query:  1364 L-RQFRXXXXXXXXXXXXXNFP-WERLYDLGPNEIGELI--RVPKLGKTIHKYVHQFPKL 1419
             + +Q                   ++++ +    E+ ELI  R P  G  I + V   PK 
Sbjct:   660 VSKQLDKIGISLSNTMVNAGLTSFKKIEEANAREL-ELILNRHPPFGTQIKEAVMYLPKY 718

Query:  1420 EL-ATHIQPITRSTLRVELTIS-PDFQWDEKLHGGSEGFW--ILVEDVDSEAIRLIQACV 1475
             EL A  I   + +   + +TI   +F+  +      +  +  +++ D D++ +   +   
Sbjct:   719 ELEAEQIARYSDTKAEILVTIILRNFEQLQTKRTAPDFHYATLIIGDADNQVVCKHKIMD 778

Query:  1476 DVLSSNG-WL 1484
              VL  +G W+
Sbjct:   779 SVLLKSGNWV 788

 Score = 300 (110.7 bits), Expect = 7.9e-68, Sum P(3) = 7.9e-68
 Identities = 86/238 (36%), Positives = 128/238 (53%)

Query:   803 SLVQEMVGNFGKDEIHLLHDE-RGPVLEALIAR--TIRNIEATQED-----VRLVGLSAT 854
             S +Q +V  F  DE+H++ DE RGP LE +++R  T++++  T E+     VR V +SAT
Sbjct:   131 SFIQ-LVRLFLIDEVHVIKDENRGPTLEVVVSRMKTVQSLSKTLENASPAPVRFVAVSAT 189

Query:   855 LPNYKDVATLLRI--KPETGLFYFDNSFRPVALEQQYIGVTEKKALKRFQ---VMNDIVY 909
             +PN +D+A  L    +P   L   D S RPV L++  +G         F+    +N  VY
Sbjct:   190 IPNAEDIAEWLSDGERPAVCL-KMDESHRPVKLQKVVLGFPSSSNQTEFKFDLALNYKVY 248

Query:   910 EKVMEHAGRNQLLVFVHSRKETGKTARAIRDMCLEKDTLGQFLREGSASMEVLRTEADQV 969
               +  ++ +   LVF  +RK   + A       L KD   +F+      +  L+  A  +
Sbjct:   249 SVIRTYSDQKPTLVFCATRKGVQQAASV-----LVKDA--KFIITVEQKLR-LQKSAYSI 300

Query:   970 KNGELRDLLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
             ++ +L+D L YG   HHAGM   DR LVE+LF    + VL +T+TLA GVNLPAH VV
Sbjct:   301 RDSKLKDTLVYGVGYHHAGMELSDRKLVEELFTSGDLPVLFTTSTLAMGVNLPAHLVV 358

 Score = 142 (55.0 bits), Expect = 2.7e-51, Sum P(3) = 2.7e-51
 Identities = 54/189 (28%), Positives = 88/189 (46%)

Query:   547 SLVQEMVGNFGKDEIHLLHDE-RGPVLEALIAR--TIRNIEATQED-----VRLVGLSAT 598
             S +Q +V  F  DE+H++ DE RGP LE +++R  T++++  T E+     VR V +SAT
Sbjct:   131 SFIQ-LVRLFLIDEVHVIKDENRGPTLEVVVSRMKTVQSLSKTLENASPAPVRFVAVSAT 189

Query:   599 LPNYKDVATLLRI--KPETGLFYFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKV 656
             +PN +D+A  L    +P   L   D S RPV L++  +G         F+   D+     
Sbjct:   190 IPNAEDIAEWLSDGERPAVCL-KMDESHRPVKLQKVVLGFPSSSNQTEFKF--DLAL--- 243

Query:   657 MEHAGRNQLLVSTLRVELTISPDFQWDEKLHGGSEGFWILVEDVDSEVVLHHEYFLLKSR 716
                   N  + S +R      P   +     G  +   +LV+D    + +  +  L KS 
Sbjct:   244 ------NYKVYSVIRTYSDQKPTLVFCATRKGVQQAASVLVKDAKFIITVEQKLRLQKSA 297

Query:   717 YATDDHVVK 725
             Y+  D  +K
Sbjct:   298 YSIRDSKLK 306

 Score = 107 (42.7 bits), Expect = 7.9e-68, Sum P(3) = 7.9e-68
 Identities = 24/76 (31%), Positives = 43/76 (56%)

Query:   476 FEDFKTLNRIQSRLCKSALESDENLLLCAPTGAGKTNVALLCMLQEIGKHINADGTINAD 535
             F++F   N IQS+     L +D N ++CAPTG+GKT V  L + + +      +  +   
Sbjct:     6 FKEFPYFNYIQSKAFDDLLYTDRNFVICAPTGSGKTVVFELAITRLL-----MEAPLPWL 60

Query:   536 EFKIIYVAPMRSLVQE 551
               K++Y+AP+++L  +
Sbjct:    61 NMKVVYMAPIKALCSQ 76

 Score = 44 (20.5 bits), Expect = 3.1e-61, Sum P(3) = 3.1e-61
 Identities = 12/47 (25%), Positives = 25/47 (53%)

Query:   761 PRGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQE 807
             P G+GKT V  L + + +      +  +     K++Y+AP+++L  +
Sbjct:    35 PTGSGKTVVFELAITRLL-----MEAPLPWLNMKVVYMAPIKALCSQ 76

 Score = 43 (20.2 bits), Expect = 5.6e-41, Sum P(3) = 5.6e-41
 Identities = 7/29 (24%), Positives = 17/29 (58%)

Query:  1019 VNLPAHTVVDRTLVEDLFADRHIQVLVST 1047
             + L    +   T+++DLF  +H  ++++T
Sbjct:    88 IGLTCKELTGDTVMDDLFEIQHANIIMTT 116

 Score = 41 (19.5 bits), Expect = 9.1e-41, Sum P(3) = 9.1e-41
 Identities = 6/18 (33%), Positives = 14/18 (77%)

Query:   995 TLVEDLFADRHIQVLVST 1012
             T+++DLF  +H  ++++T
Sbjct:    99 TVMDDLFEIQHANIIMTT 116


>UNIPROTKB|B4E0P5 [details] [associations]
            symbol:SNRNP200 "U5 small nuclear ribonucleoprotein 200 kDa
            helicase" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0030529
            "ribonucleoprotein complex" evidence=IEA] InterPro:IPR001650
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            GO:GO:0030529 GO:GO:0004386 InterPro:IPR004179 Pfam:PF02889
            SMART:SM00611 SMART:SM00973 EMBL:AC021188 UniGene:Hs.246112
            HGNC:HGNC:30859 ChiTaRS:SNRNP200 EMBL:AK303465 IPI:IPI00927472
            SMR:B4E0P5 STRING:B4E0P5 Ensembl:ENST00000429650
            HOGENOM:HOG000031250 HOVERGEN:HBG078981 Uniprot:B4E0P5
        Length = 595

 Score = 499 (180.7 bits), Expect = 2.6e-67, Sum P(2) = 2.6e-67
 Identities = 98/148 (66%), Positives = 113/148 (76%)

Query:  1461 EDVDSEAIRLIQACVDVLSSNGWLSPAVAAMEVAQMITQAMWSKDSYLKQLPHFNADIIK 1520
             E++ S+AIRLIQACVDVLSSNGWLSPA+AAME+AQM+TQAMWSKDSYLKQLPHF ++ IK
Sbjct:   440 EEILSKAIRLIQACVDVLSSNGWLSPALAAMELAQMVTQAMWSKDSYLKQLPHFTSEHIK 499

Query:  1521 RCTEKGVETVFDIMXXXXXXXXXXXXXXXXXXADVARFCNRYPNIELSYEVLNKDRIXXX 1580
             RCT+KGVE+VFDIM                  ADVARFCNRYPNIELSYEV++KD I   
Sbjct:   500 RCTDKGVESVFDIMEMEDEERNALLQLTDSQIADVARFCNRYPNIELSYEVVDKDSIRSG 559

Query:  1581 XXXXXXXXLDREDEVTGPVIAPFYPQKR 1608
                     L+RE+EVTGPVIAP +PQ R
Sbjct:   560 GPVVVLVQLEREEEVTGPVIAPLFPQFR 587

 Score = 481 (174.4 bits), Expect = 2.2e-65, Sum P(2) = 2.2e-65
 Identities = 125/416 (30%), Positives = 211/416 (50%)

Query:  1027 VDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQ 1086
             ++R LVE LF+   IQV+V++ +L WG+N+ AH VII  TQ YN +   +V+    DVLQ
Sbjct:   154 MERRLVEQLFSSGAIQVVVASRSLCWGMNVAAHLVIIMDTQYYNGKIHAYVDYPIYDVLQ 213

Query:  1087 MLGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMISKLPDMLNAEIVLGTVQ 1146
             M+G A RP  D +G  V++   S+  ++   L   LPVES +   + D  NAEIV  T++
Sbjct:   214 MVGHANRPLQDDEGRCVIMCQGSKKDFFKKFLYEPLPVESHLDHCMHDHFNAEIVTKTIE 273

Query:  1147 NLKDAVTWLGYTYLYIRMLRAPNLY---GISHDALKEDPLLECHRADLIHTAALHLERSG 1203
             N +DAV +L +T+LY RM + PN Y   GISH  L +      H ++L+      LE+S 
Sbjct:   274 NKQDAVDYLTWTFLYRRMTQNPNYYNLQGISHRHLSD------HLSELVEQTLSDLEQSK 327

Query:  1204 LIKYDRKSGHMQVTELGRIASHYYCTHETMATYNQLLKPTLSEIELFRVFSLSGEFRHIT 1263
              I  + +   +    LG IA++YY  + T+  ++  L        L  + S + E+ +I 
Sbjct:   328 CISIEDEMD-VAPLNLGMIAAYYYINYTTIELFSMSLNAKTKVRGLIEIISNAAEYENIP 386

Query:  1264 VRXXXXXXXXXXXXRAPIPIKEST-DEPSAKVNILLQAYISQLKLEGFALMSDMVFVTQS 1322
             +R            + P  +     ++P  K N+LLQA++S+++L    L SD   +   
Sbjct:   387 IRHHEDNLLRQLAQKVPHKLNNPKFNDPHVKTNLLLQAHLSRMQLSA-ELQSDTEEILSK 445

Query:  1323 AARLMRAIFEIVLYRGWAQLADKALSLCKMVDRRMWQSMSPLRQFRXXXXXXXXXXXXXN 1382
             A RL++A  +++   GW   A  A+ L +MV + MW   S L+Q                
Sbjct:   446 AIRLIQACVDVLSSNGWLSPALAAMELAQMVTQAMWSKDSYLKQLPHFTSEHIKRCTDKG 505

Query:  1383 FPWERLYDLGPNEIGELIRVPKLGKT----IHKYVHQFPKLELATHIQPITRSTLR 1434
                E ++D+   E  E   + +L  +    + ++ +++P +EL+  +  + + ++R
Sbjct:   506 V--ESVFDIMEMEDEERNALLQLTDSQIADVARFCNRYPNIELSYEV--VDKDSIR 557

 Score = 230 (86.0 bits), Expect = 2.6e-67, Sum P(2) = 2.6e-67
 Identities = 61/185 (32%), Positives = 95/185 (51%)

Query:   843 QEDVRLVGLSATLPNYKDVATLLRIKPETGLFYFDNSFRPVALEQQYIGVTEKKALKRFQ 902
             +  +R+V LS++L N KDVA  L     T  F F  + RPV LE    G        R  
Sbjct:     9 ERPIRIVALSSSLSNAKDVAHWLGCSA-TSTFNFHPNVRPVPLELHIQGFNISHTQTRLL 67

Query:   903 VMNDIVYEKVMEHAGRNQLLVFVHSRKETGKTARAIRDMCLEKDTLGQFLREGSASMEVL 962
              M   VY  + +H+ +  ++VFV SRK+T  TA  I   C       +FL     + + L
Sbjct:    68 SMAKPVYHAITKHSPKKPVIVFVPSRKQTRLTAIDILTTCAADIQRQRFLH---CTEKDL 124

Query:   963 RTEADQVKNGELRDLLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLP 1022
                 +++ +  L++ L  G    H G++ ++R LVE LF+   IQV+V++ +L WG+N+ 
Sbjct:   125 IPYLEKLSDSTLKETLLNGVGYLHEGLSPMERRLVEQLFSSGAIQVVVASRSLCWGMNVA 184

Query:  1023 AHTVV 1027
             AH V+
Sbjct:   185 AHLVI 189

 Score = 93 (37.8 bits), Expect = 7.0e-53, Sum P(2) = 7.0e-53
 Identities = 26/81 (32%), Positives = 38/81 (46%)

Query:   587 QEDVRLVGLSATLPNYKDVATLLRIKPETGLFYFDNSFRPVALEQQYIGVTEKKALKRFQ 646
             +  +R+V LS++L N KDVA  L     T  F F  + RPV LE    G        R  
Sbjct:     9 ERPIRIVALSSSLSNAKDVAHWLGCSA-TSTFNFHPNVRPVPLELHIQGFNISHTQTRLL 67

Query:   647 VMNDIVYEKVMEHAGRNQLLV 667
              M   VY  + +H+ +  ++V
Sbjct:    68 SMAKPVYHAITKHSPKKPVIV 88

 Score = 39 (18.8 bits), Expect = 6.4e-14, Sum P(2) = 6.4e-14
 Identities = 7/18 (38%), Positives = 11/18 (61%)

Query:  1513 HFNADIIKRCTEKGVETV 1530
             HFNA+I+ +  E   + V
Sbjct:   262 HFNAEIVTKTIENKQDAV 279

 Score = 37 (18.1 bits), Expect = 5.4e-47, Sum P(2) = 5.4e-47
 Identities = 6/13 (46%), Positives = 8/13 (61%)

Query:  1144 TVQNLKDAVTWLG 1156
             ++ N KD   WLG
Sbjct:    20 SLSNAKDVAHWLG 32


>UNIPROTKB|A2PYH4 [details] [associations]
            symbol:HFM1 "Probable ATP-dependent DNA helicase HFM1"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179
            Pfam:PF02889 SMART:SM00973 eggNOG:COG1204 GO:GO:0008026 KO:K15271
            EMBL:AB204867 EMBL:AK094079 EMBL:BX323048 EMBL:AC098691
            IPI:IPI00374013 IPI:IPI00852603 RefSeq:NP_001017975.3
            UniGene:Hs.454818 ProteinModelPortal:A2PYH4 SMR:A2PYH4
            STRING:A2PYH4 PhosphoSite:A2PYH4 PaxDb:A2PYH4 PRIDE:A2PYH4
            Ensembl:ENST00000294696 Ensembl:ENST00000370425 GeneID:164045
            KEGG:hsa:164045 UCSC:uc001doa.4 CTD:164045 GeneCards:GC01M091726
            HGNC:HGNC:20193 HPA:HPA035557 neXtProt:NX_A2PYH4
            PharmGKB:PA142671690 HOGENOM:HOG000293238 HOVERGEN:HBG103774
            InParanoid:A2PYH4 OMA:EADEMKS OrthoDB:EOG44XJHC ChiTaRS:HFM1
            GenomeRNAi:164045 NextBio:88429 ArrayExpress:A2PYH4 Bgee:A2PYH4
            CleanEx:HS_HFM1 Genevestigator:A2PYH4 Uniprot:A2PYH4
        Length = 1435

 Score = 431 (156.8 bits), Expect = 8.5e-65, Sum P(3) = 8.5e-65
 Identities = 146/475 (30%), Positives = 230/475 (48%)

Query:  1028 DRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQM 1087
             DR +VE  F    + VL +T+TLA GVNLPAH V+IK T  Y    G + E    D+LQM
Sbjct:   594 DRKVVEGAFTVGDLPVLFTTSTLAMGVNLPAHLVVIKSTMHY--AGGLFEEYSETDILQM 651

Query:  1088 LGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMISKLPDMLNAEIVLGTVQN 1147
             +GRAGRPQ+DT    V++T  S    Y+ +L  +  VES +   L + LNAEIVL T+ +
Sbjct:   652 IGRAGRPQFDTTATAVIMTRLSTRDKYIQMLACRDTVESSLHRHLIEHLNAEIVLHTITD 711

Query:  1148 LKDAVTWLGYTYLYIRMLRAPNLYGISHDALKEDPLLECHRADLIHTAALHLERSGLIKY 1207
             +  AV W+  T LYIR L+ P+ YG +   L +D + E    +L       L    LIK 
Sbjct:   712 VNIAVEWIRSTLLYIRALKNPSHYGFA-SGLNKDGI-EAKLQELCLKNLNDLSSLDLIKM 769

Query:  1208 DRKSGHMQVTELGRIASHYYCTHETMATYNQLL-KPTLSEIELFRVFSLSGEFRHITVRX 1266
             D +  + + TE GR+ + YY T ET+  +  +  K TLS+  L  + +   EF  I +R 
Sbjct:   770 D-EGVNFKPTEAGRLMAWYYITFETVKKFYTISGKETLSD--LVTLIAGCKEFLDIQLRI 826

Query:  1267 XXXXXXXXXXX---RAPI--PIKESTDEPSAKVNILLQAYISQLKLEGFALMSDMVFVTQ 1321
                           R  I  P++        KVN L+QA +  + ++ FAL  D   + +
Sbjct:   827 NEKKTLNTLNKDPNRITIRFPMEGRIKTREMKVNCLIQAQLGCIPIQDFALTQDTAKIFR 886

Query:  1322 SAARLMRAIFEIVLY--RGWAQLADKALSLCKMVDRRMWQ-SMSPLRQFRXXXXXXXXXX 1378
               +R+ R + + V    + +A L + +L L K    ++W+ S+   +Q            
Sbjct:   887 HGSRITRWLSDFVAAQEKKFAVLLN-SLILAKCFRCKLWENSLHVSKQLEKIGITLSNAI 945

Query:  1379 XXXNFP-WERLYDLGPNEIGELI--RVPKLGKTIHKYVHQFPKLELATHIQPITR---ST 1432
                    ++++ +    E+ ELI  R P  G  I + V   PK EL   ++ ITR   +T
Sbjct:   946 VNAGLTSFKKIEETDAREL-ELILNRHPPFGTQIKETVMYLPKYELK--VEQITRYSDTT 1002

Query:  1433 LRVELT-ISPDFQWDEKLHGGSEGFWI--LVEDVDSEAIRLIQACVDVLSSNG-W 1483
               + +T I  +F+  +     S+  ++  ++ D D++ + L +    VL   G W
Sbjct:  1003 AEILVTVILRNFEQLQTKRTASDSHYVTLIIGDADNQVVYLHKITDSVLLKAGSW 1057

 Score = 269 (99.8 bits), Expect = 8.5e-65, Sum P(3) = 8.5e-65
 Identities = 84/239 (35%), Positives = 129/239 (53%)

Query:   803 SLVQEMVGNFGKDEIHLLHDE-RGPVLEALIAR--TIRNIEATQED------VRLVGLSA 853
             SLVQ +V  F  DE+H++ DE RGP LE +++R  T++++  T ++      +R V +SA
Sbjct:   400 SLVQ-LVRLFLIDEVHIVKDENRGPTLEVVVSRMKTVQSVSQTLKNTSTAIPMRFVAVSA 458

Query:   854 TLPNYKDVATLLRI--KPETGLFYFDNSFRPVALEQQYIGV--TEKKALKRFQV-MNDIV 908
             T+PN +D+A  L    +P   L   D S RPV L++  +G   +  +   +F + +N  +
Sbjct:   459 TIPNAEDIAEWLSDGERPAVCL-KMDESHRPVKLQKVVLGFPCSSNQTEFKFDLTLNYKI 517

Query:   909 YEKVMEHAGRNQLLVFVHSRKETGKTARAIRDMCLEKDTLGQFLREGSASMEVLRTEADQ 968
                +  ++ +   LVF  +RK   + A       L KD   +F+         L+  A  
Sbjct:   518 ASVIQMYSDQKPTLVFCATRKGVQQAASV-----LVKDA--KFIMTVEQKQR-LQKYAYS 569

Query:   969 VKNGELRDLLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
             V++ +LRD+L  G A HHAGM   DR +VE  F    + VL +T+TLA GVNLPAH VV
Sbjct:   570 VRDSKLRDILKDGAAYHHAGMELSDRKVVEGAFTVGDLPVLFTTSTLAMGVNLPAHLVV 628

 Score = 129 (50.5 bits), Expect = 3.7e-50, Sum P(3) = 3.7e-50
 Identities = 38/100 (38%), Positives = 60/100 (60%)

Query:   547 SLVQEMVGNFGKDEIHLLHDE-RGPVLEALIAR--TIRNIEATQED------VRLVGLSA 597
             SLVQ +V  F  DE+H++ DE RGP LE +++R  T++++  T ++      +R V +SA
Sbjct:   400 SLVQ-LVRLFLIDEVHIVKDENRGPTLEVVVSRMKTVQSVSQTLKNTSTAIPMRFVAVSA 458

Query:   598 TLPNYKDVATLLRI--KPETGLFYFDNSFRPVALEQQYIG 635
             T+PN +D+A  L    +P   L   D S RPV L++  +G
Sbjct:   459 TIPNAEDIAEWLSDGERPAVCL-KMDESHRPVKLQKVVLG 497

 Score = 115 (45.5 bits), Expect = 8.5e-65, Sum P(3) = 8.5e-65
 Identities = 30/94 (31%), Positives = 52/94 (55%)

Query:   461 TLVPIDKLPRYVQHAFEDFKTLNRIQSRLCKSALESDENLLLCAPTGAGKTNV---ALLC 517
             +L  + ++P   +  F++F   N IQS+     L +D N ++CAPTG+GKT V   A+  
Sbjct:   260 SLKAVTEIPAKFRSIFKEFPYFNYIQSKAFDDLLYTDRNFVICAPTGSGKTVVFELAITR 319

Query:   518 MLQEIGKHINADGTINADEFKIIYVAPMRSLVQE 551
             +L E+         +N    KI+Y+AP+++L  +
Sbjct:   320 LLMEVPLP-----WLN---IKIVYMAPIKALCSQ 345

 Score = 43 (20.2 bits), Expect = 2.9e-57, Sum P(3) = 2.9e-57
 Identities = 16/50 (32%), Positives = 27/50 (54%)

Query:   761 PRGAGKTNV---ALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQE 807
             P G+GKT V   A+  +L E+         +N    KI+Y+AP+++L  +
Sbjct:   304 PTGSGKTVVFELAITRLLMEVPLP-----WLN---IKIVYMAPIKALCSQ 345

 Score = 42 (19.8 bits), Expect = 4.4e-41, Sum P(3) = 4.4e-41
 Identities = 7/29 (24%), Positives = 17/29 (58%)

Query:  1019 VNLPAHTVVDRTLVEDLFADRHIQVLVST 1047
             + L    +   T+++DLF  +H  ++++T
Sbjct:   357 IGLNCKELTGDTVMDDLFEIQHAHIIMTT 385

 Score = 41 (19.5 bits), Expect = 5.6e-41, Sum P(3) = 5.6e-41
 Identities = 6/18 (33%), Positives = 14/18 (77%)

Query:   995 TLVEDLFADRHIQVLVST 1012
             T+++DLF  +H  ++++T
Sbjct:   368 TVMDDLFEIQHAHIIMTT 385

 Score = 38 (18.4 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
 Identities = 6/12 (50%), Positives = 11/12 (91%)

Query:   696 LVEDVDSEVVLH 707
             L+E +++E+VLH
Sbjct:   696 LIEHLNAEIVLH 707


>TAIR|locus:2089144 [details] [associations]
            symbol:RCK "ROCK-N-ROLLERS" species:3702 "Arabidopsis
            thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0017111
            "nucleoside-triphosphatase activity" evidence=IEA] [GO:0003678 "DNA
            helicase activity" evidence=ISS] [GO:0007131 "reciprocal meiotic
            recombination" evidence=RCA;IMP] [GO:0051026 "chiasma assembly"
            evidence=IMP] [GO:0000911 "cytokinesis by cell plate formation"
            evidence=RCA] [GO:0006302 "double-strand break repair"
            evidence=RCA] [GO:0006312 "mitotic recombination" evidence=RCA]
            [GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0007067
            "mitosis" evidence=RCA] [GO:0007129 "synapsis" evidence=RCA]
            [GO:0010564 "regulation of cell cycle process" evidence=RCA]
            [GO:0042138 "meiotic DNA double-strand break formation"
            evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
            evidence=RCA] InterPro:IPR001650 InterPro:IPR003593
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00382 SMART:SM00490 GO:GO:0005524 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0003678 InterPro:IPR004179
            Pfam:PF02889 SMART:SM00973 eggNOG:COG1204 GO:GO:0007131
            GO:GO:0008026 GO:GO:0051026 KO:K15271 EMBL:AY822649 EMBL:AY960701
            IPI:IPI00517826 RefSeq:NP_189410.2 UniGene:At.53523
            ProteinModelPortal:Q5D892 SMR:Q5D892 STRING:Q5D892 PRIDE:Q5D892
            EnsemblPlants:AT3G27730.1 GeneID:822395 KEGG:ath:AT3G27730
            TAIR:At3g27730 HOGENOM:HOG000029933 InParanoid:Q5D892 OMA:IMTRRET
            PhylomeDB:Q5D892 ProtClustDB:CLSN2699173 Genevestigator:Q5D892
            Uniprot:Q5D892
        Length = 1133

 Score = 358 (131.1 bits), Expect = 4.4e-64, Sum P(3) = 4.4e-64
 Identities = 83/206 (40%), Positives = 119/206 (57%)

Query:  1028 DRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQM 1087
             DR+LVE LF +  IQV+ +T TLA G+NLPAHTV+IK TQ +N EKG ++E     +LQM
Sbjct:   348 DRSLVEGLFLNGDIQVICTTNTLAHGINLPAHTVVIKSTQHFNKEKGHYMEYDRSTLLQM 407

Query:  1088 LGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMISKLPDMLNAEIVLGTVQN 1147
              GRAGRP +D  G  +++T    +  Y +LLN    VESQ++  L + L AEIV  T+ +
Sbjct:   408 SGRAGRPPFDDTGMVIIMTRRETVHLYENLLNGCEVVESQLLPCLIEHLTAEIVQLTISD 467

Query:  1148 LKDAVTWLGYTYLYIRMLRAPNLYGISHDALKEDPLLECHRADLIHTAALHLERSGLIKY 1207
             +  A+ W+  +YLY+RM + P  Y I     K+   +E H  +L       L +  +I  
Sbjct:   468 ITRAIEWMKCSYLYVRMKKNPENYAIKKGIPKDR--VEKHLQELCLQKINELSQYQMIWT 525

Query:  1208 DRKSGHMQVTELGRIASHYYCTHETM 1233
             D     ++  E GR+ + YY   ETM
Sbjct:   526 DTDGFVLKPEEPGRLMTKYYLKFETM 551

 Score = 301 (111.0 bits), Expect = 4.4e-64, Sum P(3) = 4.4e-64
 Identities = 74/220 (33%), Positives = 120/220 (54%)

Query:   815 DEIHLLHDERGPVLEALIART---IRNIE---ATQEDVRLVGLSATLPNYKDVATLLRIK 868
             DE+HLL+D RG  LEA+++R      N E   +T   VRL+ +SAT+PN +D+A  L++ 
Sbjct:   165 DEVHLLNDPRGAALEAIVSRLKILSSNHELRSSTLASVRLLAVSATIPNIEDLAEWLKV- 223

Query:   869 PETGLFYFDNSFRPVALEQQYIGVTEKKALKRFQV-MNDIVYEKVMEHAGRNQLLVFVHS 927
             P  G+  F    RPV L  +  G    K    F+  + + +Y+ +M+++     LVF  +
Sbjct:   224 PTAGIKRFGEEMRPVKLTTKVFGYAAAKNDFLFEKRLQNYIYDILMQYSKGKSALVFCST 283

Query:   928 RKETGKTARAIRDMCLEKDTLGQFLREGSASMEVLRTEADQVKNGELRDLLPYGFAIHHA 987
             RK   + A+ +    +       F++     +E LR  +    + +++  +  G   H+ 
Sbjct:   284 RKGAQEAAQKLAQTAMTYGYSNPFIKSRE-QLERLREASPMCSDKQMQSYILQGVGYHNG 342

Query:   988 GMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
             G+ + DR+LVE LF +  IQV+ +T TLA G+NLPAHTVV
Sbjct:   343 GLCQKDRSLVEGLFLNGDIQVICTTNTLAHGINLPAHTVV 382

 Score = 156 (60.0 bits), Expect = 6.4e-49, Sum P(3) = 6.4e-49
 Identities = 41/121 (33%), Positives = 69/121 (57%)

Query:   559 DEIHLLHDERGPVLEALIART---IRNIE---ATQEDVRLVGLSATLPNYKDVATLLRIK 612
             DE+HLL+D RG  LEA+++R      N E   +T   VRL+ +SAT+PN +D+A  L++ 
Sbjct:   165 DEVHLLNDPRGAALEAIVSRLKILSSNHELRSSTLASVRLLAVSATIPNIEDLAEWLKV- 223

Query:   613 PETGLFYFDNSFRPVALEQQYIGVTEKKALKRFQV-MNDIVYEKVMEHA-GRNQLLVSTL 670
             P  G+  F    RPV L  +  G    K    F+  + + +Y+ +M+++ G++ L+  + 
Sbjct:   224 PTAGIKRFGEEMRPVKLTTKVFGYAAAKNDFLFEKRLQNYIYDILMQYSKGKSALVFCST 283

Query:   671 R 671
             R
Sbjct:   284 R 284

 Score = 147 (56.8 bits), Expect = 4.4e-64, Sum P(3) = 4.4e-64
 Identities = 34/100 (34%), Positives = 59/100 (59%)

Query:   461 TLVPIDKLPRYVQHAFEDFKTLNRIQSRLCKSALESDENLLLCAPTGAGKTNVALLCMLQ 520
             TL  +  LP   + AF  F+  N +QS        SD N+++ APTG+GKT +  LC+L+
Sbjct:     5 TLKSVSDLPGNFRSAFS-FRYFNSLQSECFPLCFHSDINMIISAPTGSGKTVLFELCILR 63

Query:   521 EIGKHINADGT-INAD-EFKIIYVAPMRSLVQEMVGNFGK 558
                K I+ +G+ ++A    K +Y++P ++LVQE + ++ +
Sbjct:    64 LFSKSISKEGSFLHAKGALKTVYISPSKALVQEKLRDWNQ 103

 Score = 88 (36.0 bits), Expect = 6.6e-58, Sum P(3) = 6.6e-58
 Identities = 19/56 (33%), Positives = 37/56 (66%)

Query:   761 PRGAGKTNVALLCMLQEIGKHINADGT-INAD-EFKIIYVAPMRSLVQEMVGNFGK 814
             P G+GKT +  LC+L+   K I+ +G+ ++A    K +Y++P ++LVQE + ++ +
Sbjct:    48 PTGSGKTVLFELCILRLFSKSISKEGSFLHAKGALKTVYISPSKALVQEKLRDWNQ 103

 Score = 38 (18.4 bits), Expect = 0.00034, Sum P(2) = 0.00034
 Identities = 23/108 (21%), Positives = 42/108 (38%)

Query:  1141 VLGTVQNLKDAVTWLGYTYLYIRM----LRAPNLYG--ISHDALKEDPLLECHRADLIHT 1194
             V  T+ N++D   WL      I+     +R   L      + A K D L E    + I+ 
Sbjct:   207 VSATIPNIEDLAEWLKVPTAGIKRFGEEMRPVKLTTKVFGYAAAKNDFLFEKRLQNYIYD 266

Query:  1195 AALHLER--SGLIKYDRKSGHMQVTE-LGRIASHYYCTHETMATYNQL 1239
               +   +  S L+    + G  +  + L + A  Y  ++  + +  QL
Sbjct:   267 ILMQYSKGKSALVFCSTRKGAQEAAQKLAQTAMTYGYSNPFIKSREQL 314

 Score = 37 (18.1 bits), Expect = 1.8e-26, Sum P(2) = 1.8e-26
 Identities = 8/35 (22%), Positives = 17/35 (48%)

Query:   318 FDFIKMLKKYRQMILYCTLLASSQSESERQKLRDT 352
             +D +    K +  +++C+    +Q  +  QKL  T
Sbjct:   265 YDILMQYSKGKSALVFCSTRKGAQEAA--QKLAQT 297

 Score = 37 (18.1 bits), Expect = 5.9e-15, Sum P(3) = 5.9e-15
 Identities = 7/30 (23%), Positives = 17/30 (56%)

Query:   800 PMRSLVQEMVGNFGKDEIHLLHDERGPVLE 829
             P  ++V +   +F K++ H +  +R  +L+
Sbjct:   377 PAHTVVIKSTQHFNKEKGHYMEYDRSTLLQ 406


>UNIPROTKB|F1MFR1 [details] [associations]
            symbol:HFM1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889
            SMART:SM00973 GO:GO:0008026 OMA:EADEMKS
            GeneTree:ENSGT00550000074822 EMBL:DAAA02007913 EMBL:DAAA02007914
            EMBL:DAAA02007915 EMBL:DAAA02007916 IPI:IPI00839892
            Ensembl:ENSBTAT00000027789 Uniprot:F1MFR1
        Length = 1438

 Score = 426 (155.0 bits), Expect = 6.7e-63, Sum P(4) = 6.7e-63
 Identities = 139/458 (30%), Positives = 219/458 (47%)

Query:  1028 DRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQM 1087
             DR +VE  F    I VL +T+TLA GVNLPAH V+IK T  Y    G + E    D+LQM
Sbjct:   597 DRKVVEGAFTVGDIPVLFTTSTLAMGVNLPAHLVVIKSTMHY--AGGMFEEYSETDILQM 654

Query:  1088 LGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMISKLPDMLNAEIVLGTVQN 1147
             +GRAGRPQ+DT    V++T  S  + Y+ +L     +ES +   L + LNAEIVL T+ N
Sbjct:   655 IGRAGRPQFDTTATAVIMTRLSTKEKYIQMLACSDTIESSLHRHLIEHLNAEIVLHTITN 714

Query:  1148 LKDAVTWLGYTYLYIRMLRAPNLYGISHDALKEDPLLECHRADLIHTAALHLERSGLIKY 1207
             +  A+ W+  T LYIR L+ P+ YG +   L +D + E    +L       L    LIK 
Sbjct:   715 VNIALEWIRSTLLYIRALKNPSHYGFA-SGLNKDGI-ESKLQELCLKNLNDLSSLNLIKM 772

Query:  1208 DRKSGHMQVTELGRIASHYYCTHETMATYNQLL-KPTLSEIELFRVFSLSGEFRHITVRX 1266
             D    + + TE GR+ + YY T ET+  +  +  K TLS+  L  + +   EF  + +R 
Sbjct:   773 DEDI-NFKPTEAGRLMAWYYITFETVKKFCTMSGKETLSD--LVTMIASCKEFLDVQLRI 829

Query:  1267 XXXXXXXXXXX---RAPI--PIKESTDEPSAKVNILLQAYISQLKLEGFALMSDMVFVTQ 1321
                           R  I  P++        KVN L+QA +  + ++ FAL  D   + +
Sbjct:   830 NEKKALNTLNKDPNRTTIRFPMEGRIKTREMKVNCLIQAQLGCIPVQDFALTQDTAKIFR 889

Query:  1322 SAARLMRAIFEIVLYRGWAQLADKALSLCKMVDRRMWQSMSP--LRQFRXXXXXXXXXXX 1379
             + +R+ R + + V  +    +   +L L K    ++W++ SP   +Q             
Sbjct:   890 NGSRITRWLSDFVATQEKFAVLLNSLILAKCFRCKLWEN-SPHVSKQLEKIGITLSNAMV 948

Query:  1380 XXNFP-WERLYDLGPNEIGELI--RVPKLGKTIHKYVHQFPKLELATHIQPITR-STLRV 1435
                   ++++ +    E+ ELI  R P  G  I + V   PK EL   ++ ITR S    
Sbjct:   949 NAGLTSFKKIEETDAREL-ELILNRHPPFGTQIKETVMYLPKYEL--EVEQITRYSDTMA 1005

Query:  1436 ELTISPDFQWDEKLH-----GGSEGFWILVEDVDSEAI 1468
             E+ ++   +  E+L        S    +++ D D++ +
Sbjct:  1006 EILVTVILRNFEQLQTKRTASNSHYVTLIIGDADNQLV 1043

 Score = 250 (93.1 bits), Expect = 6.7e-63, Sum P(4) = 6.7e-63
 Identities = 80/239 (33%), Positives = 121/239 (50%)

Query:   803 SLVQEMVGNFGKDEIHLLHDE-RGPVLEALIAR--TIRNIEATQED------VRLVGLSA 853
             SLV  +V  F  DE+H++ DE RGP LE +++R  T++ +    E+      +R V +SA
Sbjct:   402 SLVH-LVRLFLIDEVHVVKDENRGPTLEVVVSRMKTVQILSPAVENTNSIIPMRFVAVSA 460

Query:   854 TLPNYKDVATLLRIKPETGL-FYFDNSFRPVALEQQYIGVTEKKALKRFQ---VMNDIVY 909
             T+PN +D+A  L     + +    D   RPV L +  +G         F+    +N  + 
Sbjct:   461 TIPNAEDIAEWLSDGERSAVCLKMDERHRPVKLRKVVLGFPSSDNQTEFKFDLTLNYKIA 520

Query:   910 EKVMEHAGRNQLLVFVHSRKETGKTARAIRDMCLEKDTLGQFLREGSASMEVLRTEADQV 969
               +  ++ +   LVF  +RK   + A       L KD   +F+        + +  A  +
Sbjct:   521 SIIQTYSDQKPTLVFCATRKGVQQAASV-----LVKDA--KFIMTVEQKQRLQKC-AYSI 572

Query:   970 KNGELR-DLLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
             K+ +LR D+L +G A HHAGM   DR +VE  F    I VL +T+TLA GVNLPAH VV
Sbjct:   573 KDSKLRVDILIHGVAYHHAGMELSDRKVVEGAFTVGDIPVLFTTSTLAMGVNLPAHLVV 631

 Score = 130 (50.8 bits), Expect = 6.7e-63, Sum P(4) = 6.7e-63
 Identities = 47/204 (23%), Positives = 92/204 (45%)

Query:   358 ALAKILRQLDTGKNEDGDANDSADARQST-SIRHQMXXXXXXXXXXXXXTRQVLDLEDLQ 416
             A  K L ++    +EDG +NDSA+   +T S++                ++Q     D  
Sbjct:   161 AFRKRLFKISDNIHEDGYSNDSANLDSNTGSVKIVQTEVNKGKSWKDSNSKQKPQYSDCN 220

Query:   417 FSSGSHFMSNKRCELPDGSFRKQRKGY-EEVH-VPALKPKPMGPDETLVPIDKLPRYVQH 474
               + +  +     E+ +G  +        + H V  +  K +   ++L  + ++P   + 
Sbjct:   221 ILTATDTLFAS--EIREGIIKAPLFPVASQPHTVQGVTEKSL---DSLKAVTEIPAKFRS 275

Query:   475 AFEDFKTLNRIQSRLCKSALESDENLLLCAPTGAGKTNVALLCMLQEIGKHINADGTINA 534
              F++F   N IQS+     L +D N ++CAPTG+GKT V  L + + +      +  +  
Sbjct:   276 IFKEFPYFNYIQSKAFDDLLYTDRNFVICAPTGSGKTVVFELAITRLL-----MEVPLPW 330

Query:   535 DEFKIIYVAPMRSLVQEMVGNFGK 558
                KI+Y+AP+++L  +   ++ K
Sbjct:   331 SNIKIVYMAPIKALCSQRFDDWKK 354

 Score = 112 (44.5 bits), Expect = 1.4e-48, Sum P(4) = 1.4e-48
 Identities = 56/226 (24%), Positives = 99/226 (43%)

Query:   547 SLVQEMVGNFGKDEIHLLHDE-RGPVLEALIAR--TIRNIEATQED------VRLVGLSA 597
             SLV  +V  F  DE+H++ DE RGP LE +++R  T++ +    E+      +R V +SA
Sbjct:   402 SLVH-LVRLFLIDEVHVVKDENRGPTLEVVVSRMKTVQILSPAVENTNSIIPMRFVAVSA 460

Query:   598 TLPNYKDVATLLRIKPETGL-FYFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKV 656
             T+PN +D+A  L     + +    D   RPV L +  +G         F+   D+     
Sbjct:   461 TIPNAEDIAEWLSDGERSAVCLKMDERHRPVKLRKVVLGFPSSDNQTEFKF--DLTL--- 515

Query:   657 MEHAGRNQLLVSTLRVELTISPDFQWDEKLHGGSEGFWILVEDVDSEVVLHHEYFLLKSR 716
                   N  + S ++      P   +     G  +   +LV+D    + +  +  L K  
Sbjct:   516 ------NYKIASIIQTYSDQKPTLVFCATRKGVQQAASVLVKDAKFIMTVEQKQRLQKCA 569

Query:   717 YATDDHVVKFFVPVFEPLPPQYFLRIVSDRWI--GAETI--LPVSF 758
             Y+  D  ++  + +   +   +    +SDR +  GA T+  +PV F
Sbjct:   570 YSIKDSKLRVDI-LIHGVAYHHAGMELSDRKVVEGAFTVGDIPVLF 614

 Score = 48 (22.0 bits), Expect = 2.2e-54, Sum P(4) = 2.2e-54
 Identities = 14/54 (25%), Positives = 28/54 (51%)

Query:   761 PRGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNFGK 814
             P G+GKT V  L + + +      +  +     KI+Y+AP+++L  +   ++ K
Sbjct:   306 PTGSGKTVVFELAITRLL-----MEVPLPWSNIKIVYMAPIKALCSQRFDDWKK 354

 Score = 43 (20.2 bits), Expect = 2.0e-41, Sum P(4) = 2.0e-41
 Identities = 17/63 (26%), Positives = 31/63 (49%)

Query:   995 TLVEDLFADRHIQVLVSTA------TLAWGVNLPAHTV----VDRT-LVEDLFADRHIQV 1043
             T+++DLF  +H  ++++T       T  W  N   H V    +D   +V+D      ++V
Sbjct:   370 TVMDDLFEIQHAHIIMTTPEKWDSMTRKWRDNSLVHLVRLFLIDEVHVVKDENRGPTLEV 429

Query:  1044 LVS 1046
             +VS
Sbjct:   430 VVS 432

 Score = 42 (19.8 bits), Expect = 2.5e-41, Sum P(4) = 2.5e-41
 Identities = 7/29 (24%), Positives = 17/29 (58%)

Query:  1019 VNLPAHTVVDRTLVEDLFADRHIQVLVST 1047
             + L    +   T+++DLF  +H  ++++T
Sbjct:   359 IGLNCKELTGDTVMDDLFEIQHAHIIMTT 387

 Score = 41 (19.5 bits), Expect = 6.7e-63, Sum P(4) = 6.7e-63
 Identities = 9/28 (32%), Positives = 17/28 (60%)

Query:  1653 ALYFMSDAYLGCDQEYKFSIDVSEYYSG 1680
             ++  +S  Y+G D + KF++    +YSG
Sbjct:  1075 SINLISSEYVGLDIQRKFTV----FYSG 1098


>UNIPROTKB|F1S4E9 [details] [associations]
            symbol:HFM1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889
            SMART:SM00973 GO:GO:0008026 OMA:EADEMKS
            GeneTree:ENSGT00550000074822 EMBL:CU179709
            Ensembl:ENSSSCT00000007570 Uniprot:F1S4E9
        Length = 1438

 Score = 416 (151.5 bits), Expect = 1.3e-61, Sum P(4) = 1.3e-61
 Identities = 140/471 (29%), Positives = 223/471 (47%)

Query:  1028 DRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQM 1087
             DR +VE  F    + VL +T+TLA GVNLPAH V+IK T  Y    G + E    D+LQM
Sbjct:   596 DRKVVEGAFTVGDLPVLFTTSTLAMGVNLPAHLVVIKSTMHY--AGGMFEEYSETDILQM 653

Query:  1088 LGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMISKLPDMLNAEIVLGTVQN 1147
             +GRAGRPQ+DT    V++T  S  + Y+ +L     VES +   L + LNAEIVL T+ +
Sbjct:   654 IGRAGRPQFDTTATAVIMTRLSTKEKYIQMLACSDTVESSLHRHLIEHLNAEIVLHTITD 713

Query:  1148 LKDAVTWLGYTYLYIRMLRAPNLYGISHDALKEDPLLECHRADLIHTAALHLERSGLIKY 1207
             +  A+ W+  T LYIR L+ P+ YG +   L +D + E    +L       L    LIK 
Sbjct:   714 VNIALEWIRSTLLYIRALKNPSHYGFA-SGLNKDGI-ESKLQELCLKNLNDLSSLDLIKM 771

Query:  1208 DRKSGHMQVTELGRIASHYYCTHETMATYNQLL-KPTLSEIELFRVFSLSGEFRHITVRX 1266
             D    + + TE GR+ + YY T ET+  +  +  K TLS+  L  + +   EF  + +R 
Sbjct:   772 DEDI-NFKPTEAGRLMAWYYVTFETVKKFCTISGKETLSD--LVTMIASCKEFLDVQLRI 828

Query:  1267 XXXXXXXXXXX---RAPI--PIKESTDEPSAKVNILLQAYISQLKLEGFALMSDMVFVTQ 1321
                           R  I  P++        KVN L+QA +  + ++ FAL  D   + +
Sbjct:   829 NEKKTLNTLNKDPNRITIRFPMEGKIKTREMKVNCLIQAQLGCIPIQDFALTQDTSKIFR 888

Query:  1322 SAARLMRAIFEIVLYRGWAQLADKALSLCKMVDRRMWQ-SMSPLRQFRXXXXXXXXXXXX 1380
             + +R+ R + + V  +    +   +L L K    ++W+ S+   +Q              
Sbjct:   889 NGSRITRWLSDFVAVQEKFAVLLNSLILAKCFRCKLWENSLHVSKQLEKIGITLSNAMVN 948

Query:  1381 XNFP-WERLYDLGPNEIGELI--RVPKLGKTIHKYVHQFPKLELATH-IQPITRSTLRVE 1436
                  ++++ +    E+ ELI  R P  G  I + V   PK EL    I   + +T  V 
Sbjct:   949 AGLTSFKKIEETDAREL-ELILNRHPPFGTQIKETVMCLPKYELEVEQIARYSDTTAEVL 1007

Query:  1437 LT-ISPDFQWDEKLHGGSEGFWI--LVEDVDSEAIRLIQACVDVLSSNG-W 1483
             +T I  +F+  +      +  ++  ++ D D++ I   +    VL  +G W
Sbjct:  1008 VTVILRNFEPLQTKRTAPDSHYVTLIIGDADNQLIFKHKIMDSVLLKSGNW 1058

 Score = 260 (96.6 bits), Expect = 1.3e-61, Sum P(4) = 1.3e-61
 Identities = 81/238 (34%), Positives = 125/238 (52%)

Query:   803 SLVQEMVGNFGKDEIHLLHDE-RGPVLEALIAR--TIRNIEATQED------VRLVGLSA 853
             SLVQ +V  F  DE+H++ DE RGP LE +++R  T++ +    E+      +R V +SA
Sbjct:   402 SLVQ-LVRLFLIDEVHVVKDENRGPTLEVVVSRMKTVQFLSHAVENPRNIIPMRFVAVSA 460

Query:   854 TLPNYKDVATLLRIKPETGL-FYFDNSFRPVALEQQYIGV--TEKKALKRFQV-MNDIVY 909
             T+PN +D+A  L     + +    D   RPV L +  +G   +  +   +F + +N  + 
Sbjct:   461 TIPNAEDIAEWLSDGERSAICLKMDEKHRPVKLRKVVLGFPCSNNQTEFKFDLTLNYKIA 520

Query:   910 EKVMEHAGRNQLLVFVHSRKETGKTARAIRDMCLEKDTLGQFLREGSASMEVLRTEADQV 969
               V  ++ +   LVF  +RK   + A       L KD   +F+        + +  A  +
Sbjct:   521 SVVQTYSDQKPTLVFCATRKGVQQAASI-----LVKDA--KFIMTVEQKQRLHKC-AYSI 572

Query:   970 KNGELRDLLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
             ++ +LRDLL +G A HHAGM   DR +VE  F    + VL +T+TLA GVNLPAH VV
Sbjct:   573 RDSKLRDLLIHGVAYHHAGMELSDRKVVEGAFTVGDLPVLFTTSTLAMGVNLPAHLVV 630

 Score = 121 (47.7 bits), Expect = 1.3e-61, Sum P(4) = 1.3e-61
 Identities = 28/95 (29%), Positives = 53/95 (55%)

Query:   460 ETLVPIDKLPRYVQHAFEDFKTLNRIQSRLCKSALESDENLLLCAPTGAGKT---NVALL 516
             ++L  + ++P   +  F++F   N IQS+     L +D N+++CAPTG+GKT    +A+ 
Sbjct:   261 DSLKAVTEIPAKFRSVFKEFPYFNYIQSKAFDDLLYTDRNVVVCAPTGSGKTVMFELAIT 320

Query:   517 CMLQEIGKHINADGTINADEFKIIYVAPMRSLVQE 551
              +L E+         +     KI+Y+AP+++L  +
Sbjct:   321 RLLMEV--------PLPWSNIKIVYMAPIKALCSQ 347

 Score = 117 (46.2 bits), Expect = 9.3e-47, Sum P(4) = 9.3e-47
 Identities = 35/99 (35%), Positives = 55/99 (55%)

Query:   547 SLVQEMVGNFGKDEIHLLHDE-RGPVLEALIAR--TIRNIEATQED------VRLVGLSA 597
             SLVQ +V  F  DE+H++ DE RGP LE +++R  T++ +    E+      +R V +SA
Sbjct:   402 SLVQ-LVRLFLIDEVHVVKDENRGPTLEVVVSRMKTVQFLSHAVENPRNIIPMRFVAVSA 460

Query:   598 TLPNYKDVATLLRIKPETGL-FYFDNSFRPVALEQQYIG 635
             T+PN +D+A  L     + +    D   RPV L +  +G
Sbjct:   461 TIPNAEDIAEWLSDGERSAICLKMDEKHRPVKLRKVVLG 499

 Score = 46 (21.3 bits), Expect = 8.3e-54, Sum P(4) = 8.3e-54
 Identities = 14/50 (28%), Positives = 26/50 (52%)

Query:   761 PRGAGKT---NVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQE 807
             P G+GKT    +A+  +L E+         +     KI+Y+AP+++L  +
Sbjct:   306 PTGSGKTVMFELAITRLLMEV--------PLPWSNIKIVYMAPIKALCSQ 347

 Score = 42 (19.8 bits), Expect = 5.3e-39, Sum P(4) = 5.3e-39
 Identities = 7/29 (24%), Positives = 17/29 (58%)

Query:  1019 VNLPAHTVVDRTLVEDLFADRHIQVLVST 1047
             + L    +   T+++DLF  +H  ++++T
Sbjct:   359 IGLNCKELTGDTVMDDLFEIQHAHIIMTT 387

 Score = 41 (19.5 bits), Expect = 6.7e-39, Sum P(4) = 6.7e-39
 Identities = 6/18 (33%), Positives = 14/18 (77%)

Query:   995 TLVEDLFADRHIQVLVST 1012
             T+++DLF  +H  ++++T
Sbjct:   370 TVMDDLFEIQHAHIIMTT 387

 Score = 38 (18.4 bits), Expect = 1.3e-61, Sum P(4) = 1.3e-61
 Identities = 8/20 (40%), Positives = 11/20 (55%)

Query:  1665 DQEYKFSIDVSEYYSGGESD 1684
             + EYK   D S Y+   E+D
Sbjct:  1406 NSEYKKQPDFSRYHLDDEAD 1425

 Score = 38 (18.4 bits), Expect = 3.7e-07, Sum P(4) = 3.7e-07
 Identities = 6/12 (50%), Positives = 11/12 (91%)

Query:   696 LVEDVDSEVVLH 707
             L+E +++E+VLH
Sbjct:   698 LIEHLNAEIVLH 709

 Score = 37 (18.1 bits), Expect = 1.7e-61, Sum P(4) = 1.7e-61
 Identities = 6/20 (30%), Positives = 13/20 (65%)

Query:  1653 ALYFMSDAYLGCDQEYKFSI 1672
             ++  +S  Y+G D + KF++
Sbjct:  1074 SINLISSEYVGLDIQQKFTV 1093


>UNIPROTKB|E2RA34 [details] [associations]
            symbol:HFM1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889
            SMART:SM00973 GO:GO:0008026 KO:K15271 CTD:164045
            GeneTree:ENSGT00550000074822 EMBL:AAEX03004823 RefSeq:XP_537081.3
            Ensembl:ENSCAFT00000032148 GeneID:479956 KEGG:cfa:479956
            Uniprot:E2RA34
        Length = 1437

 Score = 412 (150.1 bits), Expect = 1.7e-61, Sum P(4) = 1.7e-61
 Identities = 130/425 (30%), Positives = 208/425 (48%)

Query:  1028 DRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQM 1087
             DR +VE  F    + VL +T+TLA GVNLPAH V+IK T  Y    G + E    D+LQM
Sbjct:   595 DRKVVEGAFTVGDLPVLFTTSTLAMGVNLPAHLVVIKSTMHY--AGGMFEEYSETDILQM 652

Query:  1088 LGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMISKLPDMLNAEIVLGTVQN 1147
             +GRAGRPQ+DT    V++T  S  + Y+ +L     VES +   L + LNAEIVL T+ +
Sbjct:   653 IGRAGRPQFDTTATAVIMTRLSTKEKYIQMLACSDTVESSLHRHLIEHLNAEIVLHTITD 712

Query:  1148 LKDAVTWLGYTYLYIRMLRAPNLYGISHDALKEDPLLECHRADLIHTAALH-LERSGLIK 1206
             +  A+ W+  T LYIR L+ P+ YG +   L +D + E    +L     LH L    LI+
Sbjct:   713 VNIALEWIRSTLLYIRALKNPSHYGFA-SGLNKDGI-EAKLQELC-LKNLHDLSSLDLIR 769

Query:  1207 YDRKSGHMQVTELGRIASHYYCTHETMATYNQLL-KPTLSEIELFRVFSLSGEFRHITVR 1265
              D +  + + TE GR+ + YY T ET+  +  +  K TL  ++L  + S   EF  + +R
Sbjct:   770 MD-EDVNFKPTEAGRLMAWYYITFETVKKFCTISGKETL--LDLVTMISSCKEFVDVQLR 826

Query:  1266 XXXXXXXXXXXX---RAPI--PIKESTDEPSAKVNILLQAYISQLKLEGFALMSDMVFVT 1320
                            R  I  P++        K+N L+QA +  + ++ FAL  D+  + 
Sbjct:   827 INEKKILNTLNKDPNRVTIRFPMEGRIKTREMKINCLIQAQLGCIPIQDFALTQDISKIF 886

Query:  1321 QSAARLMRAIFEIVLYRGWAQLADKALSLCKMVDRRMWQ-SMSPLRQFRXXXXXXXXXXX 1379
             ++ +R+ R + + V  +    +   +L L K    ++W+ S+   +Q             
Sbjct:   887 RNGSRITRWLSDFVAVQEKFAILLNSLILAKCFRCKLWENSLHVSKQLEKIGITLSNAMV 946

Query:  1380 XXNFP-WERLYDLGPNEIGELI--RVPKLGKTIHKYVHQFPKLELATHIQPITR-STLRV 1435
                   ++++ +    E+ ELI  R P  G  I + V   PK E+   ++ I R S    
Sbjct:   947 NAGLTSFKKIEETDAREL-ELILNRHPPFGTQIKETVMYLPKYEV--EVEQIARYSDTMA 1003

Query:  1436 ELTIS 1440
             E+ ++
Sbjct:  1004 EILVT 1008

 Score = 265 (98.3 bits), Expect = 1.7e-61, Sum P(4) = 1.7e-61
 Identities = 82/238 (34%), Positives = 126/238 (52%)

Query:   803 SLVQEMVGNFGKDEIHLLHDE-RGPVLEALIAR--TIRNIEATQED-----VRLVGLSAT 854
             SLVQ +V  F  DE+H++ DE RGP LE +++R  T++++    E+     +R V +SAT
Sbjct:   402 SLVQ-LVRLFLIDEVHVVKDENRGPTLEVVVSRMKTVQSLSPPSENSTVIPMRFVAVSAT 460

Query:   855 LPNYKDVATLLRI--KPETGLFYFDNSFRPVALEQQYIGV---TEKKALKRFQVMNDIVY 909
             +PN +D+A  L    +P   L   D   RPV L++  +G    + +   K    +N  + 
Sbjct:   461 IPNAEDIAEWLSDGERPAVCL-KMDEKHRPVKLQKVVLGFPCGSNQTEFKFDLTLNYKIA 519

Query:   910 EKVMEHAGRNQLLVFVHSRKETGKTARAIRDMCLEKDTLGQFLREGSASMEVLRTEADQV 969
               +  ++ +   LVF  +RK   + A       L KD   +F+         L+  A  +
Sbjct:   520 GVIRTYSDQKPTLVFCATRKGVQQAASV-----LVKDA--KFIMAVEQKQR-LQKYAYSI 571

Query:   970 KNGELRDLLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
             ++ +LRD+L +G A HHAGM   DR +VE  F    + VL +T+TLA GVNLPAH VV
Sbjct:   572 RDSKLRDILIHGVAYHHAGMELSDRKVVEGAFTVGDLPVLFTTSTLAMGVNLPAHLVV 629

 Score = 125 (49.1 bits), Expect = 6.0e-47, Sum P(4) = 6.0e-47
 Identities = 37/99 (37%), Positives = 58/99 (58%)

Query:   547 SLVQEMVGNFGKDEIHLLHDE-RGPVLEALIAR--TIRNIEATQED-----VRLVGLSAT 598
             SLVQ +V  F  DE+H++ DE RGP LE +++R  T++++    E+     +R V +SAT
Sbjct:   402 SLVQ-LVRLFLIDEVHVVKDENRGPTLEVVVSRMKTVQSLSPPSENSTVIPMRFVAVSAT 460

Query:   599 LPNYKDVATLLRI--KPETGLFYFDNSFRPVALEQQYIG 635
             +PN +D+A  L    +P   L   D   RPV L++  +G
Sbjct:   461 IPNAEDIAEWLSDGERPAVCL-KMDEKHRPVKLQKVVLG 498

 Score = 120 (47.3 bits), Expect = 1.7e-61, Sum P(4) = 1.7e-61
 Identities = 27/92 (29%), Positives = 51/92 (55%)

Query:   460 ETLVPIDKLPRYVQHAFEDFKTLNRIQSRLCKSALESDENLLLCAPTGAGKTNVALLCML 519
             ++L  + ++P   +  F++F   N IQS+     L +D N ++CAPTG+GKT V  L + 
Sbjct:   261 DSLKAVTEIPAKFRSIFKEFPYFNYIQSKAFDDLLYTDRNFVICAPTGSGKTVVFELAIT 320

Query:   520 QEIGKHINADGTINADEFKIIYVAPMRSLVQE 551
             + +      +  +     KI+Y+AP+++L  +
Sbjct:   321 RLL-----MEVPLPWSNIKIVYMAPIKALCSQ 347

 Score = 46 (21.3 bits), Expect = 8.6e-54, Sum P(4) = 8.6e-54
 Identities = 13/47 (27%), Positives = 25/47 (53%)

Query:   761 PRGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQE 807
             P G+GKT V  L + + +      +  +     KI+Y+AP+++L  +
Sbjct:   306 PTGSGKTVVFELAITRLL-----MEVPLPWSNIKIVYMAPIKALCSQ 347

 Score = 42 (19.8 bits), Expect = 2.3e-38, Sum P(4) = 2.3e-38
 Identities = 7/29 (24%), Positives = 17/29 (58%)

Query:  1019 VNLPAHTVVDRTLVEDLFADRHIQVLVST 1047
             + L    +   T+++DLF  +H  ++++T
Sbjct:   359 IGLNCKELTGDTVMDDLFEIQHAHIIMTT 387

 Score = 41 (19.5 bits), Expect = 2.9e-38, Sum P(4) = 2.9e-38
 Identities = 6/18 (33%), Positives = 14/18 (77%)

Query:   995 TLVEDLFADRHIQVLVST 1012
             T+++DLF  +H  ++++T
Sbjct:   370 TVMDDLFEIQHAHIIMTT 387

 Score = 38 (18.4 bits), Expect = 4.3e-07, Sum P(5) = 4.3e-07
 Identities = 6/12 (50%), Positives = 11/12 (91%)

Query:   696 LVEDVDSEVVLH 707
             L+E +++E+VLH
Sbjct:   697 LIEHLNAEIVLH 708

 Score = 37 (18.1 bits), Expect = 1.7e-61, Sum P(4) = 1.7e-61
 Identities = 8/20 (40%), Positives = 11/20 (55%)

Query:  1665 DQEYKFSIDVSEYYSGGESD 1684
             + E K  ID S Y+   E+D
Sbjct:  1405 NNECKEEIDFSRYHPDDEAD 1424

 Score = 37 (18.1 bits), Expect = 1.7e-61, Sum P(4) = 1.7e-61
 Identities = 6/20 (30%), Positives = 13/20 (65%)

Query:  1653 ALYFMSDAYLGCDQEYKFSI 1672
             ++  +S  Y+G D + KF++
Sbjct:  1073 SINLISSEYVGLDIQQKFTV 1092

 Score = 37 (18.1 bits), Expect = 3.7e-22, Sum P(4) = 3.7e-22
 Identities = 7/15 (46%), Positives = 10/15 (66%)

Query:  1520 KRCTEKGVETVFDIM 1534
             K CT  G ET+ D++
Sbjct:   797 KFCTISGKETLLDLV 811


>UNIPROTKB|E2R5U9 [details] [associations]
            symbol:HFM1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889
            SMART:SM00973 GO:GO:0008026 OMA:EADEMKS
            GeneTree:ENSGT00550000074822 EMBL:AAEX03004823
            Ensembl:ENSCAFT00000035369 Uniprot:E2R5U9
        Length = 1466

 Score = 412 (150.1 bits), Expect = 2.0e-61, Sum P(4) = 2.0e-61
 Identities = 130/425 (30%), Positives = 208/425 (48%)

Query:  1028 DRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQM 1087
             DR +VE  F    + VL +T+TLA GVNLPAH V+IK T  Y    G + E    D+LQM
Sbjct:   595 DRKVVEGAFTVGDLPVLFTTSTLAMGVNLPAHLVVIKSTMHY--AGGMFEEYSETDILQM 652

Query:  1088 LGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMISKLPDMLNAEIVLGTVQN 1147
             +GRAGRPQ+DT    V++T  S  + Y+ +L     VES +   L + LNAEIVL T+ +
Sbjct:   653 IGRAGRPQFDTTATAVIMTRLSTKEKYIQMLACSDTVESSLHRHLIEHLNAEIVLHTITD 712

Query:  1148 LKDAVTWLGYTYLYIRMLRAPNLYGISHDALKEDPLLECHRADLIHTAALH-LERSGLIK 1206
             +  A+ W+  T LYIR L+ P+ YG +   L +D + E    +L     LH L    LI+
Sbjct:   713 VNIALEWIRSTLLYIRALKNPSHYGFA-SGLNKDGI-EAKLQELC-LKNLHDLSSLDLIR 769

Query:  1207 YDRKSGHMQVTELGRIASHYYCTHETMATYNQLL-KPTLSEIELFRVFSLSGEFRHITVR 1265
              D +  + + TE GR+ + YY T ET+  +  +  K TL  ++L  + S   EF  + +R
Sbjct:   770 MD-EDVNFKPTEAGRLMAWYYITFETVKKFCTISGKETL--LDLVTMISSCKEFVDVQLR 826

Query:  1266 XXXXXXXXXXXX---RAPI--PIKESTDEPSAKVNILLQAYISQLKLEGFALMSDMVFVT 1320
                            R  I  P++        K+N L+QA +  + ++ FAL  D+  + 
Sbjct:   827 INEKKILNTLNKDPNRVTIRFPMEGRIKTREMKINCLIQAQLGCIPIQDFALTQDISKIF 886

Query:  1321 QSAARLMRAIFEIVLYRGWAQLADKALSLCKMVDRRMWQ-SMSPLRQFRXXXXXXXXXXX 1379
             ++ +R+ R + + V  +    +   +L L K    ++W+ S+   +Q             
Sbjct:   887 RNGSRITRWLSDFVAVQEKFAILLNSLILAKCFRCKLWENSLHVSKQLEKIGITLSNAMV 946

Query:  1380 XXNFP-WERLYDLGPNEIGELI--RVPKLGKTIHKYVHQFPKLELATHIQPITR-STLRV 1435
                   ++++ +    E+ ELI  R P  G  I + V   PK E+   ++ I R S    
Sbjct:   947 NAGLTSFKKIEETDAREL-ELILNRHPPFGTQIKETVMYLPKYEV--EVEQIARYSDTMA 1003

Query:  1436 ELTIS 1440
             E+ ++
Sbjct:  1004 EILVT 1008

 Score = 265 (98.3 bits), Expect = 2.0e-61, Sum P(4) = 2.0e-61
 Identities = 82/238 (34%), Positives = 126/238 (52%)

Query:   803 SLVQEMVGNFGKDEIHLLHDE-RGPVLEALIAR--TIRNIEATQED-----VRLVGLSAT 854
             SLVQ +V  F  DE+H++ DE RGP LE +++R  T++++    E+     +R V +SAT
Sbjct:   402 SLVQ-LVRLFLIDEVHVVKDENRGPTLEVVVSRMKTVQSLSPPSENSTVIPMRFVAVSAT 460

Query:   855 LPNYKDVATLLRI--KPETGLFYFDNSFRPVALEQQYIGV---TEKKALKRFQVMNDIVY 909
             +PN +D+A  L    +P   L   D   RPV L++  +G    + +   K    +N  + 
Sbjct:   461 IPNAEDIAEWLSDGERPAVCL-KMDEKHRPVKLQKVVLGFPCGSNQTEFKFDLTLNYKIA 519

Query:   910 EKVMEHAGRNQLLVFVHSRKETGKTARAIRDMCLEKDTLGQFLREGSASMEVLRTEADQV 969
               +  ++ +   LVF  +RK   + A       L KD   +F+         L+  A  +
Sbjct:   520 GVIRTYSDQKPTLVFCATRKGVQQAASV-----LVKDA--KFIMAVEQKQR-LQKYAYSI 571

Query:   970 KNGELRDLLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
             ++ +LRD+L +G A HHAGM   DR +VE  F    + VL +T+TLA GVNLPAH VV
Sbjct:   572 RDSKLRDILIHGVAYHHAGMELSDRKVVEGAFTVGDLPVLFTTSTLAMGVNLPAHLVV 629

 Score = 125 (49.1 bits), Expect = 6.8e-47, Sum P(4) = 6.8e-47
 Identities = 37/99 (37%), Positives = 58/99 (58%)

Query:   547 SLVQEMVGNFGKDEIHLLHDE-RGPVLEALIAR--TIRNIEATQED-----VRLVGLSAT 598
             SLVQ +V  F  DE+H++ DE RGP LE +++R  T++++    E+     +R V +SAT
Sbjct:   402 SLVQ-LVRLFLIDEVHVVKDENRGPTLEVVVSRMKTVQSLSPPSENSTVIPMRFVAVSAT 460

Query:   599 LPNYKDVATLLRI--KPETGLFYFDNSFRPVALEQQYIG 635
             +PN +D+A  L    +P   L   D   RPV L++  +G
Sbjct:   461 IPNAEDIAEWLSDGERPAVCL-KMDEKHRPVKLQKVVLG 498

 Score = 120 (47.3 bits), Expect = 2.0e-61, Sum P(4) = 2.0e-61
 Identities = 27/92 (29%), Positives = 51/92 (55%)

Query:   460 ETLVPIDKLPRYVQHAFEDFKTLNRIQSRLCKSALESDENLLLCAPTGAGKTNVALLCML 519
             ++L  + ++P   +  F++F   N IQS+     L +D N ++CAPTG+GKT V  L + 
Sbjct:   261 DSLKAVTEIPAKFRSIFKEFPYFNYIQSKAFDDLLYTDRNFVICAPTGSGKTVVFELAIT 320

Query:   520 QEIGKHINADGTINADEFKIIYVAPMRSLVQE 551
             + +      +  +     KI+Y+AP+++L  +
Sbjct:   321 RLL-----MEVPLPWSNIKIVYMAPIKALCSQ 347

 Score = 46 (21.3 bits), Expect = 9.8e-54, Sum P(4) = 9.8e-54
 Identities = 13/47 (27%), Positives = 25/47 (53%)

Query:   761 PRGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQE 807
             P G+GKT V  L + + +      +  +     KI+Y+AP+++L  +
Sbjct:   306 PTGSGKTVVFELAITRLL-----MEVPLPWSNIKIVYMAPIKALCSQ 347

 Score = 42 (19.8 bits), Expect = 2.6e-38, Sum P(4) = 2.6e-38
 Identities = 7/29 (24%), Positives = 17/29 (58%)

Query:  1019 VNLPAHTVVDRTLVEDLFADRHIQVLVST 1047
             + L    +   T+++DLF  +H  ++++T
Sbjct:   359 IGLNCKELTGDTVMDDLFEIQHAHIIMTT 387

 Score = 41 (19.5 bits), Expect = 3.3e-38, Sum P(4) = 3.3e-38
 Identities = 6/18 (33%), Positives = 14/18 (77%)

Query:   995 TLVEDLFADRHIQVLVST 1012
             T+++DLF  +H  ++++T
Sbjct:   370 TVMDDLFEIQHAHIIMTT 387

 Score = 38 (18.4 bits), Expect = 4.7e-07, Sum P(5) = 4.7e-07
 Identities = 6/12 (50%), Positives = 11/12 (91%)

Query:   696 LVEDVDSEVVLH 707
             L+E +++E+VLH
Sbjct:   697 LIEHLNAEIVLH 708

 Score = 37 (18.1 bits), Expect = 2.0e-61, Sum P(4) = 2.0e-61
 Identities = 6/20 (30%), Positives = 13/20 (65%)

Query:  1653 ALYFMSDAYLGCDQEYKFSI 1672
             ++  +S  Y+G D + KF++
Sbjct:  1073 SINLISSEYVGLDIQQKFTV 1092

 Score = 37 (18.1 bits), Expect = 4.1e-22, Sum P(4) = 4.1e-22
 Identities = 7/15 (46%), Positives = 10/15 (66%)

Query:  1520 KRCTEKGVETVFDIM 1534
             K CT  G ET+ D++
Sbjct:   797 KFCTISGKETLLDLV 811


>UNIPROTKB|A6NGI5 [details] [associations]
            symbol:HFM1 "Probable ATP-dependent DNA helicase HFM1"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889 SMART:SM00973
            GO:GO:0008026 EMBL:BX323048 EMBL:AC098691 HGNC:HGNC:20193
            HOGENOM:HOG000293238 HOVERGEN:HBG103774 ChiTaRS:HFM1
            IPI:IPI00852573 ProteinModelPortal:A6NGI5 STRING:A6NGI5
            Ensembl:ENST00000370424 ArrayExpress:A6NGI5 Bgee:A6NGI5
            Uniprot:A6NGI5
        Length = 1114

 Score = 431 (156.8 bits), Expect = 1.5e-57, Sum P(3) = 1.5e-57
 Identities = 146/475 (30%), Positives = 230/475 (48%)

Query:  1028 DRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQM 1087
             DR +VE  F    + VL +T+TLA GVNLPAH V+IK T  Y    G + E    D+LQM
Sbjct:   273 DRKVVEGAFTVGDLPVLFTTSTLAMGVNLPAHLVVIKSTMHY--AGGLFEEYSETDILQM 330

Query:  1088 LGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMISKLPDMLNAEIVLGTVQN 1147
             +GRAGRPQ+DT    V++T  S    Y+ +L  +  VES +   L + LNAEIVL T+ +
Sbjct:   331 IGRAGRPQFDTTATAVIMTRLSTRDKYIQMLACRDTVESSLHRHLIEHLNAEIVLHTITD 390

Query:  1148 LKDAVTWLGYTYLYIRMLRAPNLYGISHDALKEDPLLECHRADLIHTAALHLERSGLIKY 1207
             +  AV W+  T LYIR L+ P+ YG +   L +D + E    +L       L    LIK 
Sbjct:   391 VNIAVEWIRSTLLYIRALKNPSHYGFA-SGLNKDGI-EAKLQELCLKNLNDLSSLDLIKM 448

Query:  1208 DRKSGHMQVTELGRIASHYYCTHETMATYNQLL-KPTLSEIELFRVFSLSGEFRHITVRX 1266
             D +  + + TE GR+ + YY T ET+  +  +  K TLS+  L  + +   EF  I +R 
Sbjct:   449 D-EGVNFKPTEAGRLMAWYYITFETVKKFYTISGKETLSD--LVTLIAGCKEFLDIQLRI 505

Query:  1267 XXXXXXXXXXX---RAPI--PIKESTDEPSAKVNILLQAYISQLKLEGFALMSDMVFVTQ 1321
                           R  I  P++        KVN L+QA +  + ++ FAL  D   + +
Sbjct:   506 NEKKTLNTLNKDPNRITIRFPMEGRIKTREMKVNCLIQAQLGCIPIQDFALTQDTAKIFR 565

Query:  1322 SAARLMRAIFEIVLY--RGWAQLADKALSLCKMVDRRMWQ-SMSPLRQFRXXXXXXXXXX 1378
               +R+ R + + V    + +A L + +L L K    ++W+ S+   +Q            
Sbjct:   566 HGSRITRWLSDFVAAQEKKFAVLLN-SLILAKCFRCKLWENSLHVSKQLEKIGITLSNAI 624

Query:  1379 XXXNFP-WERLYDLGPNEIGELI--RVPKLGKTIHKYVHQFPKLELATHIQPITR---ST 1432
                    ++++ +    E+ ELI  R P  G  I + V   PK EL   ++ ITR   +T
Sbjct:   625 VNAGLTSFKKIEETDAREL-ELILNRHPPFGTQIKETVMYLPKYELK--VEQITRYSDTT 681

Query:  1433 LRVELT-ISPDFQWDEKLHGGSEGFWI--LVEDVDSEAIRLIQACVDVLSSNG-W 1483
               + +T I  +F+  +     S+  ++  ++ D D++ + L +    VL   G W
Sbjct:   682 AEILVTVILRNFEQLQTKRTASDSHYVTLIIGDADNQVVYLHKITDSVLLKAGSW 736

 Score = 269 (99.8 bits), Expect = 1.5e-57, Sum P(3) = 1.5e-57
 Identities = 84/239 (35%), Positives = 129/239 (53%)

Query:   803 SLVQEMVGNFGKDEIHLLHDE-RGPVLEALIAR--TIRNIEATQED------VRLVGLSA 853
             SLVQ +V  F  DE+H++ DE RGP LE +++R  T++++  T ++      +R V +SA
Sbjct:    79 SLVQ-LVRLFLIDEVHIVKDENRGPTLEVVVSRMKTVQSVSQTLKNTSTAIPMRFVAVSA 137

Query:   854 TLPNYKDVATLLRI--KPETGLFYFDNSFRPVALEQQYIGV--TEKKALKRFQV-MNDIV 908
             T+PN +D+A  L    +P   L   D S RPV L++  +G   +  +   +F + +N  +
Sbjct:   138 TIPNAEDIAEWLSDGERPAVCL-KMDESHRPVKLQKVVLGFPCSSNQTEFKFDLTLNYKI 196

Query:   909 YEKVMEHAGRNQLLVFVHSRKETGKTARAIRDMCLEKDTLGQFLREGSASMEVLRTEADQ 968
                +  ++ +   LVF  +RK   + A       L KD   +F+         L+  A  
Sbjct:   197 ASVIQMYSDQKPTLVFCATRKGVQQAASV-----LVKDA--KFIMTVEQKQR-LQKYAYS 248

Query:   969 VKNGELRDLLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
             V++ +LRD+L  G A HHAGM   DR +VE  F    + VL +T+TLA GVNLPAH VV
Sbjct:   249 VRDSKLRDILKDGAAYHHAGMELSDRKVVEGAFTVGDLPVLFTTSTLAMGVNLPAHLVV 307

 Score = 129 (50.5 bits), Expect = 6.1e-43, Sum P(3) = 6.1e-43
 Identities = 38/100 (38%), Positives = 60/100 (60%)

Query:   547 SLVQEMVGNFGKDEIHLLHDE-RGPVLEALIAR--TIRNIEATQED------VRLVGLSA 597
             SLVQ +V  F  DE+H++ DE RGP LE +++R  T++++  T ++      +R V +SA
Sbjct:    79 SLVQ-LVRLFLIDEVHIVKDENRGPTLEVVVSRMKTVQSVSQTLKNTSTAIPMRFVAVSA 137

Query:   598 TLPNYKDVATLLRI--KPETGLFYFDNSFRPVALEQQYIG 635
             T+PN +D+A  L    +P   L   D S RPV L++  +G
Sbjct:   138 TIPNAEDIAEWLSDGERPAVCL-KMDESHRPVKLQKVVLG 176

 Score = 42 (19.8 bits), Expect = 6.9e-34, Sum P(3) = 6.9e-34
 Identities = 7/29 (24%), Positives = 17/29 (58%)

Query:  1019 VNLPAHTVVDRTLVEDLFADRHIQVLVST 1047
             + L    +   T+++DLF  +H  ++++T
Sbjct:    36 IGLNCKELTGDTVMDDLFEIQHAHIIMTT 64

 Score = 41 (19.5 bits), Expect = 8.7e-34, Sum P(3) = 8.7e-34
 Identities = 6/18 (33%), Positives = 14/18 (77%)

Query:   995 TLVEDLFADRHIQVLVST 1012
             T+++DLF  +H  ++++T
Sbjct:    47 TVMDDLFEIQHAHIIMTT 64

 Score = 40 (19.1 bits), Expect = 1.5e-57, Sum P(3) = 1.5e-57
 Identities = 6/14 (42%), Positives = 12/14 (85%)

Query:   538 KIIYVAPMRSLVQE 551
             KI+Y+AP+++L  +
Sbjct:    11 KIVYMAPIKALCSQ 24

 Score = 40 (19.1 bits), Expect = 1.5e-57, Sum P(3) = 1.5e-57
 Identities = 6/14 (42%), Positives = 12/14 (85%)

Query:   794 KIIYVAPMRSLVQE 807
             KI+Y+AP+++L  +
Sbjct:    11 KIVYMAPIKALCSQ 24


>ZFIN|ZDB-GENE-061207-43 [details] [associations]
            symbol:hfm1 "HFM1, ATP-dependent DNA helicase
            homolog (S. cerevisiae)" species:7955 "Danio rerio" [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 ZFIN:ZDB-GENE-061207-43 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179
            Pfam:PF02889 SMART:SM00973 GO:GO:0008026
            GeneTree:ENSGT00550000074822 EMBL:BX927353 EMBL:CABZ01046504
            IPI:IPI00897259 ProteinModelPortal:F1QWJ0
            Ensembl:ENSDART00000099851 Bgee:F1QWJ0 Uniprot:F1QWJ0
        Length = 1049

 Score = 400 (145.9 bits), Expect = 1.7e-57, Sum P(4) = 1.7e-57
 Identities = 123/428 (28%), Positives = 203/428 (47%)

Query:  1026 VVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVL 1085
             V DR + E+ F    + VL +T+TLA GVN+PAH V+IK T  Y    G   E    D+L
Sbjct:   322 VSDRKITENAFTVGDLPVLFTTSTLAMGVNMPAHLVVIKSTMHY--VGGACEEYSEADLL 379

Query:  1086 QMLGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMISKLPDMLNAEIVLGTV 1145
             QM+GRAGRPQ+DT    V++T       Y+  L+    +ES + + L + LNAEIVL T+
Sbjct:   380 QMIGRAGRPQFDTTATAVIMTRPQTKDKYMHFLSGLDCIESSLHTNLVEHLNAEIVLHTI 439

Query:  1146 QNLKDAVTWLGYTYLYIRMLRAPNLYGISHDALKEDPLLECHRADLIHTAALHLERSGLI 1205
              ++  A+ W+  T+LYIR L+ P  YG   +  K    +E    +L       L    LI
Sbjct:   440 SDVNMALDWIRSTFLYIRALKNPKHYGFPPEVDKCG--IETKLQELCLKNLNSLASFNLI 497

Query:  1206 KYDRKSGHMQVTELGRIASHYYCTHETMATYNQLLKPTLSEIELFRVFSLSGEFRHITVR 1265
               D    +++ TE G++ + Y    +T+  ++ ++  T +  EL  + S + EF  + +R
Sbjct:   498 TMDEDI-NIKPTETGKLMARYCVAFDTVKQFS-MVTGTETLPELIEMISKAKEFSDMQLR 555

Query:  1266 XXXXXXXXXXXX---RAPI--PIKESTDEPSAKVNILLQAYISQLKLEGFALMSDMVFVT 1320
                            R  I  PI+        KVN L+QA +  + ++ F L+ D   + 
Sbjct:   556 VNERKTLNTLNKDKNRTTIRFPIEGKIKSNDMKVNCLIQAQLGCIPIQEFGLIQDTGKIF 615

Query:  1321 QSAARLMRAIFEIVLYRGWAQLADK--ALSLCKMVDRRMWQSMSPL--RQFRXXXXXXXX 1376
             ++A R+ R + E + +   +  A +  AL L K    ++W++ SP   +Q          
Sbjct:   616 RNAVRVSRYLTEFLCHHSKSNFAAQLNALILAKCFRAKLWEN-SPYISKQLERIGLSLAT 674

Query:  1377 XXXXXNFP-WERLYDLGPNEIGELI--RVPKLGKTIHKYVHQFPKLELATHIQP-ITRST 1432
                      + ++    P E+ ELI  R P  G  I + + + P+ E++    P  + ST
Sbjct:   675 ALVNAGLTTFSKIEQTSPREL-ELIVNRHPPFGNQIKEAISKLPRCEVSLEQIPRYSPST 733

Query:  1433 LRVELTIS 1440
               +  T++
Sbjct:   734 AEIVFTVN 741

 Score = 237 (88.5 bits), Expect = 1.7e-57, Sum P(4) = 1.7e-57
 Identities = 75/227 (33%), Positives = 117/227 (51%)

Query:   815 DEIHLLHDE-RGPVLEALIAR--TIR------NIEATQEDVRLVGLSATLPNYKDVATLL 865
             DE+H++ D+ RG  LE +++R  T+       N E+ +  VR V +SAT+PN +DV+  L
Sbjct:   142 DEVHVVKDKTRGATLEVVVSRMKTMHFYRQAINPES-KASVRFVAVSATIPNIQDVSEWL 200

Query:   866 RIK--PETGLFYFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEK---VMEHAGRNQ 920
               +  P T L   D S RPV L +  +G         F+    + Y+    +  ++ +  
Sbjct:   201 SDESGPATCL-EMDESHRPVKLRKVVLGFPCGSNQNEFKFDLSLNYKLANIIQTYSDQKP 259

Query:   921 LLVFVHSRKETGKTARAIRDMCLEKDTLGQFLREGSASMEVLRTEADQVKNGELRDLLPY 980
              LVF  +RK   ++A       L KD   +F+        +++  A+ + + +LRDL  Y
Sbjct:   260 TLVFCSTRKGVQQSASV-----LAKDA--RFIMSIDHKQRLVKY-ANSLLDAKLRDLFVY 311

Query:   981 GFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
             G   HHAGM   DR + E+ F    + VL +T+TLA GVN+PAH VV
Sbjct:   312 GIGYHHAGMDVSDRKITENAFTVGDLPVLFTTSTLAMGVNMPAHLVV 358

 Score = 106 (42.4 bits), Expect = 1.7e-57, Sum P(4) = 1.7e-57
 Identities = 25/81 (30%), Positives = 46/81 (56%)

Query:   476 FEDFKTLNRIQSRLCKSALESDENLLLCAPTGAGKTNVALLCMLQEIGKHINADGTINAD 535
             F+DF   N +QS+     L S++N + CAPTG+GKT +  L +++ +   I A    +  
Sbjct:     6 FKDFPYFNYVQSQALDDVLYSNKNFVACAPTGSGKTVLFELAIVRLL---IEASEPWH-- 60

Query:   536 EFKIIYVAPMRSLVQEMVGNF 556
               + +Y+AP+++L  +   N+
Sbjct:    61 NVRAVYMAPIKALCSQQYDNW 81

 Score = 101 (40.6 bits), Expect = 2.1e-43, Sum P(4) = 2.1e-43
 Identities = 33/88 (37%), Positives = 50/88 (56%)

Query:   559 DEIHLLHDE-RGPVLEALIAR--TIR------NIEATQEDVRLVGLSATLPNYKDVATLL 609
             DE+H++ D+ RG  LE +++R  T+       N E+ +  VR V +SAT+PN +DV+  L
Sbjct:   142 DEVHVVKDKTRGATLEVVVSRMKTMHFYRQAINPES-KASVRFVAVSATIPNIQDVSEWL 200

Query:   610 RIK--PETGLFYFDNSFRPVALEQQYIG 635
               +  P T L   D S RPV L +  +G
Sbjct:   201 SDESGPATCL-EMDESHRPVKLRKVVLG 227

 Score = 44 (20.5 bits), Expect = 1.7e-57, Sum P(4) = 1.7e-57
 Identities = 17/70 (24%), Positives = 31/70 (44%)

Query:  1614 VVIGDPKTNSLLSIK---RLTLQQKAKIKLDFVAPNPGHHSYALYFMSDAYLGCDQEYKF 1670
             +++GD     +   K    L L+  +  K   V  +P     +++ +S  Y+G D +   
Sbjct:   762 LIVGDCDNKVVFQQKISDTLLLKSGSWSKRIEVTRSPKGEELSIHLISSEYVGLDIQQ-- 819

Query:  1671 SIDVSEYYSG 1680
               D S +YSG
Sbjct:   820 --DYSAHYSG 827

 Score = 43 (20.2 bits), Expect = 5.7e-51, Sum P(4) = 5.7e-51
 Identities = 13/52 (25%), Positives = 28/52 (53%)

Query:   761 PRGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNF 812
             P G+GKT +  L +++ +   I A    +    + +Y+AP+++L  +   N+
Sbjct:    35 PTGSGKTVLFELAIVRLL---IEASEPWH--NVRAVYMAPIKALCSQQYDNW 81

 Score = 39 (18.8 bits), Expect = 2.4e-05, Sum P(4) = 2.4e-05
 Identities = 7/12 (58%), Positives = 11/12 (91%)

Query:   696 LVEDVDSEVVLH 707
             LVE +++E+VLH
Sbjct:   426 LVEHLNAEIVLH 437

 Score = 37 (18.1 bits), Expect = 2.4e-50, Sum P(4) = 2.4e-50
 Identities = 9/28 (32%), Positives = 13/28 (46%)

Query:   174 NLGKKITDFGAEQKSTTAEENIDDTYGI 201
             N  +K    G + K  T +  IDD + I
Sbjct:    80 NWKQKFGPLGLKCKELTGDTEIDDFFEI 107


>SGD|S000003220 [details] [associations]
            symbol:HFM1 "Meiosis specific DNA helicase" species:4932
            "Saccharomyces cerevisiae" [GO:0017111 "nucleoside-triphosphatase
            activity" evidence=IEA] [GO:0007129 "synapsis" evidence=IGI;IMP]
            [GO:0003678 "DNA helicase activity" evidence=IDA] [GO:0007126
            "meiosis" evidence=IDA] [GO:0005634 "nucleus" evidence=IEA;IDA]
            [GO:0007131 "reciprocal meiotic recombination" evidence=IMP]
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0006268 "DNA unwinding involved in
            replication" evidence=IDA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00382 SMART:SM00490 SGD:S000003220 GO:GO:0005524
            GO:GO:0005634 EMBL:BK006941 GO:GO:0046872 GO:GO:0003677 EMBL:X94357
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
            InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
            eggNOG:COG1204 GO:GO:0007131 GO:GO:0008026 GO:GO:0007129
            GO:GO:0006268 KO:K15271 EMBL:Z72773 EMBL:U22156 RefSeq:NP_011263.2
            ProteinModelPortal:P51979 SMR:P51979 DIP:DIP-2604N IntAct:P51979
            MINT:MINT-426642 STRING:P51979 PaxDb:P51979 PeptideAtlas:P51979
            EnsemblFungi:YGL251C GeneID:852641 KEGG:sce:YGL251C CYGD:YGL251c
            GeneTree:ENSGT00550000074822 HOGENOM:HOG000093662 OMA:GNYECNH
            OrthoDB:EOG4WWVSR NextBio:971894 Genevestigator:P51979
            GermOnline:YGL251C Uniprot:P51979
        Length = 1187

 Score = 306 (112.8 bits), Expect = 1.1e-50, Sum P(3) = 1.1e-50
 Identities = 111/366 (30%), Positives = 181/366 (49%)

Query:  1028 DRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQM 1087
             DRT VE  F    I +L ST+TLA GVNLPA+ VIIKGT+ +N  + +  E   LDVLQM
Sbjct:   432 DRTAVEKEFLAGSINILCSTSTLAVGVNLPAYLVIIKGTKSWNSSEIQ--EYSDLDVLQM 489

Query:  1088 LGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMISKLPDMLNAEIVLGTVQN 1147
             +GRAGRPQ++T G  V++T+    Q Y +L++    +ES +   L + L AE  L TV +
Sbjct:   490 IGRAGRPQFETHGCAVIMTDSKMKQTYENLIHGTDVLESSLHLNLIEHLAAETSLETVYS 549

Query:  1148 LKDAVTWLGYTYLYIRMLRAPNLYG-----ISHDALKEDPLLE-CHRADLIHTAALHLER 1201
             ++ AV WL  T+ Y+R  + P  Y      +S  ++++  + + C    L+ T    L +
Sbjct:   550 IETAVNWLRNTFFYVRFGKNPAAYQEVNRYVSFHSVEDSQINQFCQY--LLDT----LVK 603

Query:  1202 SGLIKYDRKSGHMQVTELGRIASHYYCTHETMATYNQLLKPTLSEIELFRVFSLSGEFRH 1261
               +I  D  +G  + T  G   + +Y + E+M  +    K  LS   +  + + S EF  
Sbjct:   604 VKII--DISNGEYKSTAYGNAMTRHYISFESMKQFINA-KKFLSLQGILNLLATSEEFSV 660

Query:  1262 ITVRXXXXXXXXXXXXRAPI---PI----KEST--DEPSAKVNILLQAYISQLKL---EG 1309
             + VR             +P+   P     K+S   D  S KV++L+Q  +  L+    EG
Sbjct:   661 MRVRHNEKKLFKEINL-SPLLKYPFLTEKKQSQIIDRVSQKVSLLIQYELGGLEFPSYEG 719

Query:  1310 FA-----LMSDMVFVTQSAARLMRAIFEIVLYRGWAQLADKALSLCKMVDRRMWQSMSP- 1363
              +     L+ D   V +   RL++ + +  + +         L L + ++   W++ +P 
Sbjct:   720 ASKLHQTLVQDKFLVFRHCFRLLKCMVDTFIEKSDGTSLKNTLFLLRSLNGHCWEN-TPM 778

Query:  1364 -LRQFR 1368
              LRQ +
Sbjct:   779 VLRQLK 784

 Score = 239 (89.2 bits), Expect = 1.1e-50, Sum P(3) = 1.1e-50
 Identities = 69/217 (31%), Positives = 109/217 (50%)

Query:   815 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPE--TG 872
             DEIH + ++RG  LE ++ R    +    +++R V LSAT+PN +D+A  L+   E    
Sbjct:   268 DEIHTIKEKRGASLEVILTR----MNTMCQNIRFVALSATVPNIEDLALWLKTNNELPAN 323

Query:   873 LFYFDNSFRPVALEQQYIGVTE--KKALKRFQVMNDIVYEKVMEHAGRNQLLVFVHSRKE 930
             +  FD S+R V L +   G +   K   ++  + N  + E + +HA    +L+F  +R  
Sbjct:   324 ILSFDESYRQVQLTKFVYGYSFNCKNDFQKDAIYNSKLIEIIEKHADNRPVLIFCPTRAS 383

Query:   931 TGKTARAIRDMCLEKDTLGQFLREGSASMEVLRTEADQVKNGELRDLLPYGFAIHHAGMT 990
             T  TA+ +         L   +   S         +D++ N    + +  G A HHAG++
Sbjct:   384 TISTAKFL---------LNNHIFSKSKK-RCNHNPSDKILN----ECMQQGIAFHHAGIS 429

Query:   991 RVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
               DRT VE  F    I +L ST+TLA GVNLPA+ V+
Sbjct:   430 LEDRTAVEKEFLAGSINILCSTSTLAVGVNLPAYLVI 466

 Score = 136 (52.9 bits), Expect = 1.1e-50, Sum P(3) = 1.1e-50
 Identities = 38/96 (39%), Positives = 56/96 (58%)

Query:   468 LPRYVQHAFEDFKTLNRIQSRLCKSALESDENLLLCAPTGAGKTNVALLCMLQEIGKHIN 527
             LP   +  F+ F   N++QS    S  ES+EN ++ +PTG+GKT +  L +L+ I K  N
Sbjct:   126 LPDSFRGVFK-FTEFNKMQSEAFPSIYESNENCIISSPTGSGKTVLFELAILRLI-KETN 183

Query:   528 ADGTINADEFKIIYVAPMRSLVQEMVGNFGKDEIHL 563
             +D T N    KIIY+AP +SL  EM  N+    ++L
Sbjct:   184 SD-TNNT---KIIYIAPTKSLCYEMYKNWFPSFVNL 215

 Score = 135 (52.6 bits), Expect = 7.4e-40, Sum P(3) = 7.4e-40
 Identities = 47/174 (27%), Positives = 80/174 (45%)

Query:   559 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPE--TG 616
             DEIH + ++RG  LE ++ R    +    +++R V LSAT+PN +D+A  L+   E    
Sbjct:   268 DEIHTIKEKRGASLEVILTR----MNTMCQNIRFVALSATVPNIEDLALWLKTNNELPAN 323

Query:   617 LFYFDNSFRPVALEQQYIGVTE--KKALKRFQVMNDIVYEKVMEHAGRNQLLV------S 668
             +  FD S+R V L +   G +   K   ++  + N  + E + +HA    +L+      S
Sbjct:   324 ILSFDESYRQVQLTKFVYGYSFNCKNDFQKDAIYNSKLIEIIEKHADNRPVLIFCPTRAS 383

Query:   669 TLRVE--LTISPDFQWDEKLHGGSEGFWILVEDVDSEVVLHHEYFLLKSRYATD 720
             T+     L  +  F   +K    +    IL E +   +  HH    L+ R A +
Sbjct:   384 TISTAKFLLNNHIFSKSKKRCNHNPSDKILNECMQQGIAFHHAGISLEDRTAVE 437

 Score = 83 (34.3 bits), Expect = 3.6e-45, Sum P(3) = 3.6e-45
 Identities = 25/59 (42%), Positives = 35/59 (59%)

Query:   761 PRGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNFGKDEIHL 819
             P G+GKT +  L +L+ I K  N+D T N    KIIY+AP +SL  EM  N+    ++L
Sbjct:   162 PTGSGKTVLFELAILRLI-KETNSD-TNNT---KIIYIAPTKSLCYEMYKNWFPSFVNL 215


>UNIPROTKB|G4N3Z7 [details] [associations]
            symbol:MGG_05900 "Uncharacterized protein" species:242507
            "Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            InterPro:IPR001650 InterPro:IPR003583 InterPro:IPR003593
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00278 SMART:SM00382 SMART:SM00490 GO:GO:0005524
            EMBL:CM001233 GO:GO:0003677 GO:GO:0006281 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889
            SMART:SM00973 GO:GO:0008026 KO:K15271 RefSeq:XP_003711726.1
            ProteinModelPortal:G4N3Z7 EnsemblFungi:MGG_05900T0 GeneID:2684075
            KEGG:mgr:MGG_05900 Uniprot:G4N3Z7
        Length = 1508

 Score = 302 (111.4 bits), Expect = 1.1e-48, Sum P(3) = 1.1e-48
 Identities = 115/426 (26%), Positives = 192/426 (45%)

Query:  1028 DRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQM 1087
             DR  VE  + +  + V+  T+TL+ GVNLP HTVI+KGT  +  + G+ +E   L+V+QM
Sbjct:   555 DRLAVEKAYLEGKLHVICCTSTLSVGVNLPCHTVILKGTMGF--QDGKLLEYSDLEVVQM 612

Query:  1088 LGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMISKLPDMLNAEIVLGTVQN 1147
             LGRAGRPQ+D     +++T       Y ++ +    +ES +   L   LN+EI LGT+++
Sbjct:   613 LGRAGRPQFDNSAVAIILTRSETKARYEAMASGTQVLESTLHHNLIHHLNSEICLGTIRS 672

Query:  1148 LKDAVTWLGYTYLYIRMLRAPNLYGISHDALKEDPLLECHRADLIHTAALHL-ERSGLIK 1206
             L  A  WL  T+L +R+   P+ Y I   +   + L      D +    ++L + + LI+
Sbjct:   673 LDSAKEWLKSTFLGVRLHANPSHYKIDSQSPNGEKLHVGRSIDDMCEREINLLQEAKLIR 732

Query:  1207 YDRKSGHMQVTELGRIASHYYCTHETMATYNQLLKPTLSEI-ELFRVFSLSGEFRHITV- 1264
             +D     ++ T  GR  S Y    ETM     +  PT ++I ++    + + EF+ + + 
Sbjct:   733 FDNNV--LECTTAGRSMSEYMIRFETMKMILDM--PTGTKIHDILMTLAKAEEFKDLRIK 788

Query:  1265 ---RXXXXXXXXXXXXRAPIPIKESTDEPSAKVNILLQAYIS-----QLKLEGFALMSDM 1316
                R            R  +  K+ T E   KV I++Q  +        K +  + +S  
Sbjct:   789 SNERALYRTLNESPFIRYQVRAKDIT-EAWHKVFIIVQLDLGGGDFPSPKSDTSSSVSKN 847

Query:  1317 VF-VT--QSAAR---LMRAIFEIVLYRGWAQLADKALSLCKMVDRRMWQSM-SPLRQFRX 1369
              F +T  Q + R   L+R + +       ++  + AL L + ++   W+ + S L Q   
Sbjct:   848 HFNITKRQVSDRMKWLLRCVIDCKGAERDSETVNNALELLRSINAGGWEGLPSQLLQVPG 907

Query:  1370 X---XXXXXXXXXXXNFPWERLYDLGPNEIGELIRVPKLGKTIHKYVHQFPKLELATHIQ 1426
                            N    R  D    E   L R P  GK +   +  FPKL L   + 
Sbjct:   908 IGPVSMRKLTTHGITNMASLREADYMAIE-NILTRKPPFGKNLMDTMKTFPKLGLELSLS 966

Query:  1427 PITRST 1432
               + S+
Sbjct:   967 EASNSS 972

 Score = 242 (90.2 bits), Expect = 1.1e-48, Sum P(3) = 1.1e-48
 Identities = 71/220 (32%), Positives = 111/220 (50%)

Query:   815 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLL-RIKPETG- 872
             DE+H L D RG  LE LI R    ++    ++R+V LSAT+PN +DVA  L R   +   
Sbjct:   383 DEVHFLKDTRGATLEVLICR----MKTQVSNIRVVALSATVPNSEDVAKWLGRGNTDNHQ 438

Query:   873 ---LFYFDNSFRPVALEQQYIGVTEKKALKRFQVMNDI-VYEKVMEHAGRNQLLVFVHSR 928
                L  F   FRPV L++   G+       +F+   D  + E +  H+ +  ++VF  +R
Sbjct:   439 PARLETFGEEFRPVRLQKHVYGLHCSGNAFQFEPQLDTKLCEVITTHSQKKPIIVFCFTR 498

Query:   929 KETGKTARAIRDMCLEK-DTLGQFLREGSASMEVLRTEADQVKNGELRDLLPYGFAIHHA 987
             K    TA+ +  + +   D    +   G  +M+V         N  L+ ++  G A HHA
Sbjct:   499 KSCELTAKKLSQLWISMADDKKPWPGPGQ-NMKVT--------NDGLQQVMQQGVAFHHA 549

Query:   988 GMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
             G+ + DR  VE  + +  + V+  T+TL+ GVNLP HTV+
Sbjct:   550 GLEQQDRLAVEKAYLEGKLHVICCTSTLSVGVNLPCHTVI 589

 Score = 123 (48.4 bits), Expect = 2.8e-36, Sum P(3) = 2.8e-36
 Identities = 38/115 (33%), Positives = 58/115 (50%)

Query:   559 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLL-RIKPETG- 616
             DE+H L D RG  LE LI R    ++    ++R+V LSAT+PN +DVA  L R   +   
Sbjct:   383 DEVHFLKDTRGATLEVLICR----MKTQVSNIRVVALSATVPNSEDVAKWLGRGNTDNHQ 438

Query:   617 ---LFYFDNSFRPVALEQQYIGVTEKKALKRFQVMNDI-VYEKVMEHAGRNQLLV 667
                L  F   FRPV L++   G+       +F+   D  + E +  H+ +  ++V
Sbjct:   439 PARLETFGEEFRPVRLQKHVYGLHCSGNAFQFEPQLDTKLCEVITTHSQKKPIIV 493

 Score = 122 (48.0 bits), Expect = 1.1e-48, Sum P(3) = 1.1e-48
 Identities = 32/100 (32%), Positives = 55/100 (55%)

Query:   464 PIDKLPRYVQHAFEDFKTLNRIQSRLCKSALESDENLLLCAPTGAGKTNVALLCMLQEIG 523
             P D LP  ++  F  F+  N +QS+   S  ++++N+++ APTG+GKT +  L + + + 
Sbjct:   237 PRDVLPDRLRVVFP-FELFNAVQSKSFASVYKTNDNVVVSAPTGSGKTAIFELAICKLLS 295

Query:   524 KHINADGTINADEFKIIYVAPMRSLVQEMVGNFGKDEIHL 563
             +  N D       FK+IYVAP ++L  E   ++     HL
Sbjct:   296 Q--NTD-----QNFKVIYVAPTKALCSERARDWESKFRHL 328

 Score = 66 (28.3 bits), Expect = 7.7e-43, Sum P(3) = 7.7e-43
 Identities = 19/59 (32%), Positives = 30/59 (50%)

Query:   761 PRGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNFGKDEIHL 819
             P G+GKT +  L + + + +  N D       FK+IYVAP ++L  E   ++     HL
Sbjct:   277 PTGSGKTAIFELAICKLLSQ--NTD-----QNFKVIYVAPTKALCSERARDWESKFRHL 328


>UNIPROTKB|I3LT20 [details] [associations]
            symbol:LOC100525691 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR011545
            Pfam:PF00270 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889
            GeneTree:ENSGT00640000091272 GO:GO:0008026 EMBL:CU896688
            Ensembl:ENSSSCT00000023488 Uniprot:I3LT20
        Length = 354

 Score = 422 (153.6 bits), Expect = 1.4e-48, Sum P(3) = 1.4e-48
 Identities = 73/92 (79%), Positives = 85/92 (92%)

Query:   668 STLRVELTISPDFQWDEKLHGGSEGFWILVEDVDSEVVLHHEYFLLKSRYATDDHVVKFF 727
             STL+VELTI+PDFQWDEK+HG SE FWILVEDVDSEV+LHHEYFLLK++YA D+H++ FF
Sbjct:    30 STLKVELTITPDFQWDEKVHGSSEAFWILVEDVDSEVILHHEYFLLKAKYAQDEHLITFF 89

Query:   728 VPVFEPLPPQYFLRIVSDRWIGAETILPVSFR 759
             VPVFEPLPPQYF+R+VSDRW+  ET LPVSFR
Sbjct:    90 VPVFEPLPPQYFIRVVSDRWLSCETQLPVSFR 121

 Score = 309 (113.8 bits), Expect = 4.7e-26, P = 4.7e-26
 Identities = 55/67 (82%), Positives = 62/67 (92%)

Query:  1402 VPKLGKTIHKYVHQFPKLELATHIQPITRSTLRVELTISPDFQWDEKLHGGSEGFWILVE 1461
             +PK+GKTIHKYVH FPKLEL+ H+QPITRSTL+VELTI+PDFQWDEK+HG SE FWILVE
Sbjct:     1 MPKMGKTIHKYVHLFPKLELSVHLQPITRSTLKVELTITPDFQWDEKVHGSSEAFWILVE 60

Query:  1462 DVDSEAI 1468
             DVDSE I
Sbjct:    61 DVDSEVI 67

 Score = 107 (42.7 bits), Expect = 1.4e-48, Sum P(3) = 1.4e-48
 Identities = 28/62 (45%), Positives = 39/62 (62%)

Query:   802 RSLVQEMVGNFGKDEIHLLHDERGPVLEALIARTIRNIEATQE-DVRLVGLSATLPNYKD 860
             R  VQ  +  F  DE+HL+  E GPVLE + +R +R I +  E  +R+V LS++L N KD
Sbjct:   276 RKNVQN-INLFVVDEVHLIGGENGPVLEVICSR-MRYISSQIERPIRIVALSSSLSNAKD 333

Query:   861 VA 862
             VA
Sbjct:   334 VA 335

 Score = 107 (42.7 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
 Identities = 28/62 (45%), Positives = 39/62 (62%)

Query:   546 RSLVQEMVGNFGKDEIHLLHDERGPVLEALIARTIRNIEATQE-DVRLVGLSATLPNYKD 604
             R  VQ  +  F  DE+HL+  E GPVLE + +R +R I +  E  +R+V LS++L N KD
Sbjct:   276 RKNVQN-INLFVVDEVHLIGGENGPVLEVICSR-MRYISSQIERPIRIVALSSSLSNAKD 333

Query:   605 VA 606
             VA
Sbjct:   334 VA 335

 Score = 97 (39.2 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
 Identities = 30/107 (28%), Positives = 54/107 (50%)

Query:   453 PKPMGPDETLVPIDKLPRYV--QHAFED-----FKTLNRIQSRLCKSALESDENLLLCAP 505
             P+   P   L+ +  LP       AFE      F   N IQ+++  +   SD+N+ + AP
Sbjct:   126 PEKYPPPTELLDLQPLPVSALRNSAFESLYQDKFPFFNPIQTQVFNTVYNSDDNVFVGAP 185

Query:   506 TGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEM 552
             TG+GKT  A   +L+ + +  N++G       + +Y+ PM +L +++
Sbjct:   186 TGSGKTICAEFAILRMLLQ--NSEG-------RCVYITPMEALAEQV 223

 Score = 48 (22.0 bits), Expect = 1.4e-48, Sum P(3) = 1.4e-48
 Identities = 13/48 (27%), Positives = 27/48 (56%)

Query:   761 PRGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEM 808
             P G+GKT  A   +L+ + +  N++G       + +Y+ PM +L +++
Sbjct:   185 PTGSGKTICAEFAILRMLLQ--NSEG-------RCVYITPMEALAEQV 223


>RGD|1561120 [details] [associations]
            symbol:Snrnp200 "small nuclear ribonucleoprotein 200 (U5)"
            species:10116 "Rattus norvegicus" [GO:0000398 "mRNA splicing, via
            spliceosome" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
            [GO:0005681 "spliceosomal complex" evidence=ISO] [GO:0005682 "U5
            snRNP" evidence=ISO] [GO:0008026 "ATP-dependent helicase activity"
            evidence=ISO] [GO:0071013 "catalytic step 2 spliceosome"
            evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] RGD:1561120
            GO:GO:0008380 GO:GO:0005682 GO:GO:0071013 InterPro:IPR004179
            Pfam:PF02889 eggNOG:COG1204 HOGENOM:HOG000157749 GO:GO:0008026
            IPI:IPI00562876 EMBL:BC099211 UniGene:Rn.76239
            ProteinModelPortal:Q4KLH1 SMR:Q4KLH1 IntAct:Q4KLH1 STRING:Q4KLH1
            UCSC:RGD:1561120 InParanoid:Q4KLH1 ArrayExpress:Q4KLH1
            Genevestigator:Q4KLH1 Uniprot:Q4KLH1
        Length = 151

 Score = 514 (186.0 bits), Expect = 6.7e-48, P = 6.7e-48
 Identities = 96/132 (72%), Positives = 109/132 (82%)

Query:  1553 ADVARFCNRYPNIELSYEVLNKDRIXXXXXXXXXXXLDREDEVTGPVIAPFYPQKREEGW 1612
             ADVARFCNRYPNIELSYEV++KD I           L+RE+EVTGPVIAP +PQKREEGW
Sbjct:    20 ADVARFCNRYPNIELSYEVVDKDSIRSGGPVVVLVQLEREEEVTGPVIAPLFPQKREEGW 79

Query:  1613 WVVIGDPKTNSLLSIKRLTLQQKAKIKLDFVAPNPGHHSYALYFMSDAYLGCDQEYKFSI 1672
             WVVIGD K+NSL+SIKRLTLQQKAK+KLDFVAP  G H+Y LYFMSDAY+GCDQEYKFS+
Sbjct:    80 WVVIGDAKSNSLISIKRLTLQQKAKVKLDFVAPATGGHNYTLYFMSDAYMGCDQEYKFSV 139

Query:  1673 DVSEYYSGGESD 1684
             DV E  +  +SD
Sbjct:   140 DVKEAETDSDSD 151


>UNIPROTKB|I3LAH4 [details] [associations]
            symbol:I3LAH4 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] InterPro:IPR001650 Pfam:PF00271
            GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
            GeneTree:ENSGT00640000091272 EMBL:CU104757
            Ensembl:ENSSSCT00000025204 OMA:FMKEGSA Uniprot:I3LAH4
        Length = 197

 Score = 430 (156.4 bits), Expect = 6.0e-39, P = 6.0e-39
 Identities = 86/184 (46%), Positives = 120/184 (65%)

Query:   846 VRLVGLSATLPNYKDVATLLRIKPETGLFYFDNSFRPVALEQQYIGVTEKKALKRFQVMN 905
             +R++GLSATLPNY DVAT L + P  GLFYFD  FRPV L Q ++GV     +++   M+
Sbjct:     2 IRILGLSATLPNYLDVATFLHVNPCIGLFYFDGRFRPVPLGQTFLGVKSANKVQQLNNMD 61

Query:   906 DIVYEKVMEH--AGRNQLLVFVHSRKETGKTARAIRDMCLEKDTLGQFLREGSASMEVLR 963
             ++ YE V++   AG +Q++VFVH+R  T +TA ++ +       +  FL           
Sbjct:    62 EVCYESVLKQVKAG-HQVMVFVHARNATVRTAMSLIERAKNNGQISYFLPTQGPEYGHAE 120

Query:   964 TEADQVKNGELRDLLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPA 1023
              +  + +N ++R+L P GF+IHHAGM R DR LVE LF++ HI+VLV TATLAWGVNLPA
Sbjct:   121 KQVQKSRNKQVRELFPDGFSIHHAGMLRQDRNLVESLFSNGHIKVLVCTATLAWGVNLPA 180

Query:  1024 HTVV 1027
             H V+
Sbjct:   181 HAVI 184

 Score = 189 (71.6 bits), Expect = 1.1e-25, Sum P(2) = 1.1e-25
 Identities = 38/80 (47%), Positives = 55/80 (68%)

Query:   590 VRLVGLSATLPNYKDVATLLRIKPETGLFYFDNSFRPVALEQQYIGVTEKKALKRFQVMN 649
             +R++GLSATLPNY DVAT L + P  GLFYFD  FRPV L Q ++GV     +++   M+
Sbjct:     2 IRILGLSATLPNYLDVATFLHVNPCIGLFYFDGRFRPVPLGQTFLGVKSANKVQQLNNMD 61

Query:   650 DIVYEKVMEH--AGRNQLLV 667
             ++ YE V++   AG +Q++V
Sbjct:    62 EVCYESVLKQVKAG-HQVMV 80

 Score = 147 (56.8 bits), Expect = 1.1e-25, Sum P(2) = 1.1e-25
 Identities = 29/37 (78%), Positives = 32/37 (86%)

Query:  1028 DRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIK 1064
             DR LVE LF++ HI+VLV TATLAWGVNLPAH VIIK
Sbjct:   150 DRNLVESLFSNGHIKVLVCTATLAWGVNLPAHAVIIK 186


>ASPGD|ASPL0000030426 [details] [associations]
            symbol:AN5514 species:162425 "Emericella nidulans"
            [GO:0005634 "nucleus" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003678 "DNA helicase activity" evidence=IEA] [GO:0007129
            "synapsis" evidence=IEA] [GO:0007131 "reciprocal meiotic
            recombination" evidence=IEA] [GO:0006268 "DNA unwinding involved in
            replication" evidence=IEA] InterPro:IPR011545 Pfam:PF00270
            GO:GO:0005524 GO:GO:0003676 EMBL:BN001305 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 InterPro:IPR004179 Pfam:PF02889
            SMART:SM00973 eggNOG:COG1204 EMBL:AACD01000094 GO:GO:0008026
            KO:K15271 OrthoDB:EOG4WWVSR RefSeq:XP_663118.1
            ProteinModelPortal:Q5B1R6 EnsemblFungi:CADANIAT00003572
            GeneID:2871792 KEGG:ani:AN5514.2 HOGENOM:HOG000216651
            Uniprot:Q5B1R6
        Length = 1385

 Score = 245 (91.3 bits), Expect = 5.2e-35, Sum P(3) = 5.2e-35
 Identities = 95/381 (24%), Positives = 160/381 (41%)

Query:  1078 ELGALDVLQMLGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMISKLPDMLN 1137
             E   L+V+QMLGRAGRPQ+D     V++T    + +Y  L++    VES +   L + LN
Sbjct:   571 EYSDLEVMQMLGRAGRPQFDDSATAVILTRKERVSHYERLVSGSESVESSLHLNLIEHLN 630

Query:  1138 AEIVLGTVQNLKDAVTWLGYTYLYIRMLRAPNLYGISHDALKEDPLLECHRADLIHTAAL 1197
             AEI LG +++ + A +WL  T+L +R+ R P  Y +   A + D   E  R        L
Sbjct:   631 AEIGLGNIKSTESAASWLAGTFLSVRLRRNPTHYRLKEGANRNDTN-EMLRHICEKDIKL 689

Query:  1198 HLERSGLIKYDRKSGHMQVTELGRIASHYYCTHETMATYNQLLKPTLSEIELFRVFSLSG 1257
              L+   L+  D +S  ++ T  G   S Y   +ETM T  ++ KP     ++  +   + 
Sbjct:   690 -LQEYALV--DTES--LKSTPFGYAMSRYSIRYETMKTLIKM-KPKSDIAQILAIICQAE 743

Query:  1258 EFRHITVRXXXXXXXXXXXXRAPI--PIKESTDEPSAKVNILLQAYIS--------QLKL 1307
             EFR I  +               I  PI+     P+ K+++L+Q+ +         Q + 
Sbjct:   744 EFRDIRFKAGEKLLYKEINRSKDIRFPIEVDIVLPAHKISLLIQSELGAVEFPSGEQFQK 803

Query:  1308 EGFALMSDMVFVTQSAARLMRAIFEIVLYRGWAQLADKALSLCKMVDRRMWQSMSPLRQF 1367
               F    +   V     R++R I +   +   +     AL L + +  R+W   SP +  
Sbjct:   804 HRFTFQQEKSTVFAHVNRVIRCIIDCQAHLKDSVTLCNALGLARSLAARVWDH-SPFQMK 862

Query:  1368 RXXXXXXXXXXXXXNFPWERLYDLG---PNEIG-ELIRVPKLGKTIHKYVHQFPKLELAT 1423
             +                 + +  L    P+ I   L +    G  + K++  FPKL ++ 
Sbjct:   863 QIEKLNATAVRKLVAHGIDSIVALEKSKPHLIDIALSKNQAFGTRLQKHLANFPKLRVSV 922

Query:  1424 -------HIQPITRSTLRVEL 1437
                    H  P  R   + E+
Sbjct:   923 KMTGKDIHPGPFVRVNFKAEI 943

 Score = 170 (64.9 bits), Expect = 5.2e-35, Sum P(3) = 5.2e-35
 Identities = 55/201 (27%), Positives = 96/201 (47%)

Query:   815 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 874
             DE+H L + RG  LEA+++R    +++   +VR V LSAT+PN +D+AT L     +   
Sbjct:   379 DEVHTLKEARGATLEAVVSR----MKSIGSNVRFVALSATIPNSEDIATWLGRNATSQHV 434

Query:   875 -----YFDNSFRPVALEQQYIGVTEKKALKRF-QVMNDIVYEKVMEHAGRNQLLVFVHSR 928
                  +F   FRPV L++   G         F +++N  +   +  H+ +  +++F  +R
Sbjct:   435 PAHREHFGEEFRPVKLQKFVYGYHFSGNNFAFDKLLNSNI---IGTHSAKKPIMIFCSTR 491

Query:   929 KETGKTARAIRDMCLEKDTLGQFLREGSASMEVLRTEADQVKNGELRDLLPYGFAIHHAG 988
               T  TA+ +  +      L +  +  +  + V        K+ +L+     G A HHAG
Sbjct:   492 NSTVSTAKELARLWSMSSRLVRMWKGPNKPLPV--------KHADLKVTTAAGVAFHHAG 543

Query:   989 MTRVDRTLVEDLFADRHIQVL 1009
             +   DR LVE+ +    I V+
Sbjct:   544 LETEDRHLVENGYLQGKISVI 564

 Score = 120 (47.3 bits), Expect = 5.2e-35, Sum P(3) = 5.2e-35
 Identities = 32/103 (31%), Positives = 58/103 (56%)

Query:   462 LVPIDKLPRYVQHAFEDFKTLNRIQSRLCKSALESDENLLLCAPTGAGKTNVALLCMLQE 521
             L+ + +LP   +  F +F   N +QS+   +  +SD+N+++ APTG+GKT V  L + + 
Sbjct:   231 LLSVRELPDNYRPLF-NFPVFNAVQSKCFHAIYKSDDNVVIAAPTGSGKTVVMELAICRL 289

Query:   522 IGKHINADGTINADEFKIIYVAPMRSLVQEMVGNFGKDEIHLL 564
             +  +I  D      +FK++Y AP +SL  E   ++ + + H L
Sbjct:   290 L--NIRKD-----KKFKVVYQAPTKSLCSERFRDWNQ-KFHAL 324

 Score = 115 (45.5 bits), Expect = 2.6e-29, Sum P(3) = 2.6e-29
 Identities = 30/82 (36%), Positives = 46/82 (56%)

Query:   559 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 618
             DE+H L + RG  LEA+++R    +++   +VR V LSAT+PN +D+AT L     +   
Sbjct:   379 DEVHTLKEARGATLEAVVSR----MKSIGSNVRFVALSATIPNSEDIATWLGRNATSQHV 434

Query:   619 -----YFDNSFRPVALEQQYIG 635
                  +F   FRPV L++   G
Sbjct:   435 PAHREHFGEEFRPVKLQKFVYG 456

 Score = 65 (27.9 bits), Expect = 2.6e-29, Sum P(3) = 2.6e-29
 Identities = 31/110 (28%), Positives = 52/110 (47%)

Query:   712 LLKSRYATDDHVVKFFVPVFEPLPPQYFLRIV-SDRWIGAETILPVSFRLPRGAGKTNVA 770
             LL  R   D++   F  PVF  +  + F  I  SD     + ++  +   P G+GKT V 
Sbjct:   231 LLSVRELPDNYRPLFNFPVFNAVQSKCFHAIYKSD-----DNVVIAA---PTGSGKTVVM 282

Query:   771 LLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNFGKDEIHLL 820
              L + + +  +I  D      +FK++Y AP +SL  E   ++ + + H L
Sbjct:   283 ELAICRLL--NIRKD-----KKFKVVYQAPTKSLCSERFRDWNQ-KFHAL 324

 Score = 58 (25.5 bits), Expect = 1.7e-15, Sum P(3) = 1.7e-15
 Identities = 12/87 (13%), Positives = 35/87 (40%)

Query:  1490 AMEVAQMITQAMWSKDSY-LKQLPHFNADIIKRCTEKGVETVFDIMXXXXXXXXXXXXXX 1548
             A+ +A+ +   +W    + +KQ+   NA  +++    G++++  +               
Sbjct:   842 ALGLARSLAARVWDHSPFQMKQIEKLNATAVRKLVAHGIDSIVALEKSKPHLIDIALSKN 901

Query:  1549 XXXXADVARFCNRYPNIELSYEVLNKD 1575
                   + +    +P + +S ++  KD
Sbjct:   902 QAFGTRLQKHLANFPKLRVSVKMTGKD 928

 Score = 44 (20.5 bits), Expect = 1.8e-09, Sum P(4) = 1.8e-09
 Identities = 20/80 (25%), Positives = 31/80 (38%)

Query:  1130 SKLPDMLNAEIVLGTVQNLKDAVTWLGYTYLYIRMLRAPNL-YGISHDALKEDPL--LEC 1186
             +K P M+       TV   K+       +   +RM + PN    + H  LK      +  
Sbjct:   480 AKKPIMIFCSTRNSTVSTAKELARLWSMSSRLVRMWKGPNKPLPVKHADLKVTTAAGVAF 539

Query:  1187 HRADLIHTAALHLERSGLIK 1206
             H A L  T   HL  +G ++
Sbjct:   540 HHAGL-ETEDRHLVENGYLQ 558

 Score = 43 (20.2 bits), Expect = 5.6e-14, Sum P(3) = 5.6e-14
 Identities = 23/120 (19%), Positives = 50/120 (41%)

Query:  1104 LITNHSELQYYLSLLNHQLPVE-SQMISKLPDMLNAEIVLGTVQNLKDAVTWLGYTYLYI 1162
             ++ N+SE +   +  +  +  E S+++S  P    A    G  Q++K     +  +   +
Sbjct:  1096 MVRNNSEERLIDNWGDDDVEFEPSELVSAAPLQKKASKNKGDSQDVKIGHCEITMSSFNV 1155

Query:  1163 RMLRAPNLYGISHDALKEDPLLECHRADLIHTAALHLERSGLIKYDRKSGHM-QVTELGR 1221
             R  ++   +    + L   P +   ++D  H+ A    +S L     K G    VT++ +
Sbjct:  1156 RAKQSRCKHLCCREGLSSPPKVTKKKSDNAHSEAAEFSQSRLTGNIAKKGTKPMVTDIAK 1215

 Score = 42 (19.8 bits), Expect = 2.9e-09, Sum P(4) = 2.9e-09
 Identities = 15/46 (32%), Positives = 21/46 (45%)

Query:   646 QVMNDIVYEKVMEHAGRNQLLVSTLRVELTISPDFQWDEKLHGGSE 691
             Q  +D+   +++  AGR Q   S   V LT        E+L  GSE
Sbjct:   570 QEYSDLEVMQMLGRAGRPQFDDSATAVILTRKERVSHYERLVSGSE 615

 Score = 39 (18.8 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
 Identities = 13/48 (27%), Positives = 20/48 (41%)

Query:   931 TGKTARAIRDMCLEKDTLGQFLREGSASMEVL--RTEADQVKNGELRD 976
             TGKT    R+  LE   + +     S   EV   RT  +   + +L +
Sbjct:   170 TGKTDAIFRNRDLEAQKMTEIFHPQSTDREVQHDRTSTNPATSHDLAE 217


>UNIPROTKB|F1RYR3 [details] [associations]
            symbol:LOC100517018 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR011545
            Pfam:PF00270 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GeneTree:ENSGT00700000104562
            InterPro:IPR004179 Pfam:PF02889 SMART:SM00973 GO:GO:0008026
            EMBL:CU104757 Ensembl:ENSSSCT00000004816 Uniprot:F1RYR3
        Length = 391

 Score = 324 (119.1 bits), Expect = 1.2e-27, P = 1.2e-27
 Identities = 63/163 (38%), Positives = 100/163 (61%)

Query:  1307 LEGFALMSDMVFVTQSAARLMRAIFEIVLYRGWAQLADKALSLCKMVDRRMWQSMSPLRQ 1366
             ++ F+L+SD  +V Q+AAR++RA+FEI L + W  +  + L+L K++D+R+W   SPLRQ
Sbjct:     1 MDSFSLISDSAYVAQNAARIVRALFEIALRKRWPAMTYRLLNLSKVIDKRLWGWTSPLRQ 60

Query:  1367 FRXXXXXXXXXXXXXNFPWERLYDLGPNEIGELIRVPKLGKTIHKYVHQFPKLELATHIQ 1426
             F              N   ++L D+  +EIG ++    +G  + + VHQ P + +   IQ
Sbjct:    61 FSVLPPHILTRLEEKNLTVDKLKDMRKDEIGHILHHVNIGLKVKQCVHQIPSVTMEASIQ 120

Query:  1427 PITRSTLRVELTISPDFQWDEKLHGG-SEGFWILVEDVDSEAI 1468
             PITR+ LRV L+I PDF W++++HG   E +WI VED  ++ I
Sbjct:   121 PITRTVLRVTLSICPDFTWNDQVHGTVGEPWWIWVEDPTNDHI 163

 Score = 233 (87.1 bits), Expect = 1.7e-17, Sum P(3) = 1.7e-17
 Identities = 43/95 (45%), Positives = 67/95 (70%)

Query:   668 STLRVELTISPDFQWDEKLHGG-SEGFWILVEDVDSEVVLHHEYFL-LKSRYATDD-HVV 724
             + LRV L+I PDF W++++HG   E +WI VED  ++ + H EYFL LK +  + +  ++
Sbjct:   125 TVLRVTLSICPDFTWNDQVHGTVGEPWWIWVEDPTNDHIYHSEYFLVLKKQVISKEAQLL 184

Query:   725 KFFVPVFEPLPPQYFLRIVSDRWIGAETILPVSFR 759
              F +P+FEPLP QY++R VSDRW+GAE +  ++F+
Sbjct:   185 VFTIPIFEPLPSQYYIRAVSDRWLGAEAVCIINFQ 219

 Score = 59 (25.8 bits), Expect = 1.7e-17, Sum P(3) = 1.7e-17
 Identities = 15/52 (28%), Positives = 29/52 (55%)

Query:   761 PRGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNF 812
             P G+GKT  A L + +   K+  +         K +Y+AP+++LV+E + ++
Sbjct:   281 PTGSGKTVAAELAIFRVFNKYPTS---------KAVYIAPLKALVRERMDDW 323

 Score = 41 (19.5 bits), Expect = 1.7e-17, Sum P(3) = 1.7e-17
 Identities = 7/28 (25%), Positives = 15/28 (53%)

Query:  1419 LELATHIQPITRSTLRVELTISPDFQWD 1446
             +EL   + P  +S  + +L ++   +WD
Sbjct:   336 IELTGDVTPDMKSIAKADLIVTTPEKWD 363


>UNIPROTKB|I3LAA7 [details] [associations]
            symbol:I3LAA7 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] InterPro:IPR011545 Pfam:PF00270
            GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192
            GeneTree:ENSGT00700000104562 GO:GO:0008026
            Ensembl:ENSSSCT00000023674 OMA:ENDQDET Uniprot:I3LAA7
        Length = 268

 Score = 293 (108.2 bits), Expect = 2.4e-24, P = 2.4e-24
 Identities = 74/196 (37%), Positives = 109/196 (55%)

Query:   815 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 874
             DEIHLL +ERGPVLE +++RT      T++ VR+VGLS  L N +D+A  L I+ + GLF
Sbjct:    65 DEIHLLGEERGPVLEVIVSRTNFISSHTEKPVRIVGLSTALANARDLADWLNIR-QMGLF 123

Query:   875 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQLLVFVHSRKETGKT 934
              F  S RPV LE    G   +    R   MN   ++ +  H+    +L+FV SR++T  T
Sbjct:   124 NFRPSVRPVPLEVHIQGFPGQHYCPRMASMNKPTFQAIRSHSPAKPVLIFVSSRRQTRLT 183

Query:   935 A-RAIRDMCLEKDTLGQFLREGSASME-VLRTEADQVKNGELRDLLPYGFAIHHAGMTRV 992
             A   I  +  E+D   Q+L      ME ++ T    +++  L+  L +G  +HHAG+   
Sbjct:   184 ALELIAFLATEEDPK-QWLNMDEREMENIIGT----IRDSNLKLTLAFGIGMHHAGLHER 238

Query:   993 DRTLVEDLFADRHIQV 1008
             DR  VE+LF +  +QV
Sbjct:   239 DRKTVEELFVNCKVQV 254

 Score = 188 (71.2 bits), Expect = 7.2e-13, Sum P(2) = 7.2e-13
 Identities = 44/109 (40%), Positives = 62/109 (56%)

Query:   559 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 618
             DEIHLL +ERGPVLE +++RT      T++ VR+VGLS  L N +D+A  L I+ + GLF
Sbjct:    65 DEIHLLGEERGPVLEVIVSRTNFISSHTEKPVRIVGLSTALANARDLADWLNIR-QMGLF 123

Query:   619 YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQLLV 667
              F  S RPV LE    G   +    R   MN   ++ +  H+    +L+
Sbjct:   124 NFRPSVRPVPLEVHIQGFPGQHYCPRMASMNKPTFQAIRSHSPAKPVLI 172

 Score = 46 (21.3 bits), Expect = 7.2e-13, Sum P(2) = 7.2e-13
 Identities = 13/33 (39%), Positives = 20/33 (60%)

Query:  1014 TLAWGVNLPAHTVV---DRTLVEDLFADRHIQV 1043
             TLA+G+ +  H  +   DR  VE+LF +  +QV
Sbjct:   223 TLAFGIGMH-HAGLHERDRKTVEELFVNCKVQV 254


>UNIPROTKB|I3LVA7 [details] [associations]
            symbol:I3LVA7 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] InterPro:IPR011545 Pfam:PF00270
            GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192
            GeneTree:ENSGT00700000104562 GO:GO:0008026 EMBL:CU468078
            Ensembl:ENSSSCT00000024341 Uniprot:I3LVA7
        Length = 119

 Score = 276 (102.2 bits), Expect = 1.5e-22, P = 1.5e-22
 Identities = 49/78 (62%), Positives = 64/78 (82%)

Query:   559 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 618
             DE+HLLH++RGPVLE+++ART+R +E+TQ  +R++GLSATLPNY DVAT L + P  GLF
Sbjct:    32 DEVHLLHEDRGPVLESIVARTLRQVESTQSMIRILGLSATLPNYLDVATFLHVNPCIGLF 91

Query:   619 YFDNSFRPVALEQQYIGV 636
             YFD  FRPV L Q ++GV
Sbjct:    92 YFDGRFRPVPLGQTFLGV 109

 Score = 276 (102.2 bits), Expect = 1.5e-22, P = 1.5e-22
 Identities = 49/78 (62%), Positives = 64/78 (82%)

Query:   815 DEIHLLHDERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF 874
             DE+HLLH++RGPVLE+++ART+R +E+TQ  +R++GLSATLPNY DVAT L + P  GLF
Sbjct:    32 DEVHLLHEDRGPVLESIVARTLRQVESTQSMIRILGLSATLPNYLDVATFLHVNPCIGLF 91

Query:   875 YFDNSFRPVALEQQYIGV 892
             YFD  FRPV L Q ++GV
Sbjct:    92 YFDGRFRPVPLGQTFLGV 109


>WB|WBGene00021905 [details] [associations]
            symbol:helq-1 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0000712 "resolution of meiotic
            recombination intermediates" evidence=IGI] [GO:0051117 "ATPase
            binding" evidence=IPI] [GO:0017116 "single-stranded DNA-dependent
            ATP-dependent DNA helicase activity" evidence=IDA]
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GeneTree:ENSGT00640000091272 GO:GO:0000712 GO:GO:0017116
            OMA:SRPLENC EMBL:FO080183 RefSeq:NP_001022911.1
            ProteinModelPortal:H2KY86 SMR:H2KY86 EnsemblMetazoa:Y55B1AL.3a
            GeneID:175210 KEGG:cel:CELE_Y55B1AL.3 CTD:175210
            WormBase:Y55B1AL.3a Uniprot:H2KY86
        Length = 923

 Score = 174 (66.3 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
 Identities = 69/239 (28%), Positives = 114/239 (47%)

Query:   807 EMVGNFGKDEIHLLHDE-RGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLL 865
             + VG    DE+H++ D  RG +LE L+A+ +   + T +   +VG+SATLPN  D+   L
Sbjct:   287 DRVGMVVVDELHMIGDGGRGAILEQLLAKFL--YKGTGQ---IVGMSATLPNIDDLKFAL 341

Query:   866 RIKPETGLFYFDNSFRPVAL-EQQYIGVTEKKALKRFQV-------MNDI-------VYE 910
             R       F +  +FRPV L E   IG T  +  +   +        N++       + +
Sbjct:   342 RA------FVYSTNFRPVELTEFVKIGQTMHQVSENGDLNPAGDLPTNNLKSTDPDGICQ 395

Query:   911 KVMEHAGRNQLLVFVHSRKETGKTARAIRDMCLEKDTLGQFLR-EGSASME-VLRTEADQ 968
              + +   +N  ++F  ++K     A  I         + Q  R E  A ++  L    D+
Sbjct:   396 LLAKLIPKNSAVIFCPNKKNCENVAVLIAKTLPAH--IRQAKRAESDAFLQSYLSDNDDE 453

Query:   969 VKNGELRDLLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
               +  L+  +  G A HH+G+T+ +R  VE  F +  I V+ +T+TLA GVNLP   V+
Sbjct:   454 RMDAVLKQCILSGVAYHHSGLTQDERKCVEAAFMEGLIYVVCATSTLAAGVNLPVRRVI 512

 Score = 163 (62.4 bits), Expect = 3.0e-17, Sum P(3) = 3.0e-17
 Identities = 49/139 (35%), Positives = 72/139 (51%)

Query:  1028 DRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQM 1087
             +R  VE  F +  I V+ +T+TLA GVNLP   VIIK      P  GR   LG    LQM
Sbjct:   478 ERKCVEAAFMEGLIYVVCATSTLAAGVNLPVRRVIIKA-----PMVGR-ERLGKAQYLQM 531

Query:  1088 LGRAGRPQYDTKGEGVLITNHSELQ-YYLSLLNHQLPVESQMISKLPDM----LNAEIVL 1142
              GRAGR  +DTKG+ + I    E + ++  +L   +P     +S    M    L+  +VL
Sbjct:   532 AGRAGRAGFDTKGDCITIIKAGEEERWFREMLKSDIPRCMSSLSSEESMGSFILDC-VVL 590

Query:  1143 GTVQNLKDAVTWLGYTYLY 1161
                +N+++ +T + Y+  Y
Sbjct:   591 KLAENIEEIMTAVRYSLFY 609

 Score = 105 (42.0 bits), Expect = 3.0e-17, Sum P(3) = 3.0e-17
 Identities = 34/89 (38%), Positives = 49/89 (55%)

Query:   551 EMVGNFGKDEIHLLHDE-RGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLL 609
             + VG    DE+H++ D  RG +LE L+A+ +   + T +   +VG+SATLPN  D+   L
Sbjct:   287 DRVGMVVVDELHMIGDGGRGAILEQLLAKFL--YKGTGQ---IVGMSATLPNIDDLKFAL 341

Query:   610 RIKPETGLFYFDNSFRPVAL-EQQYIGVT 637
             R       F +  +FRPV L E   IG T
Sbjct:   342 RA------FVYSTNFRPVELTEFVKIGQT 364

 Score = 91 (37.1 bits), Expect = 3.0e-17, Sum P(3) = 3.0e-17
 Identities = 33/102 (32%), Positives = 43/102 (42%)

Query:   426 NKRCELPDGSFRKQRKGYEEVHVPALKPKPMGPDETLV--PIDKLPRYVQHAFEDFKTLN 483
             N   E  D  F    +  E+V +    P P    ETL   P   LP      +   K L+
Sbjct:   108 NNESENDDDPFGLSFRN-EQVLMSKCAPAPEKRPETLTLDPSKCLPERDMEMYRKIKKLD 166

Query:   484 RI----QSRLCKSALESDENLLLCAPTGAGKTNVALLCMLQE 521
             +     Q  L    L   EN +L  PTGAGKT +A + ML+E
Sbjct:   167 KFYDWQQECLSDKRLLDGENCILSLPTGAGKTLIAEVLMLRE 208

 Score = 52 (23.4 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
 Identities = 11/18 (61%), Positives = 14/18 (77%)

Query:   760 LPRGAGKTNVALLCMLQE 777
             LP GAGKT +A + ML+E
Sbjct:   191 LPTGAGKTLIAEVLMLRE 208

 Score = 38 (18.4 bits), Expect = 7.6e-12, Sum P(3) = 7.6e-12
 Identities = 9/17 (52%), Positives = 11/17 (64%)

Query:   482 LNRIQSRLCKSA-LESD 497
             +NR   R CKSA +E D
Sbjct:     1 MNRTPIRRCKSAEIEED 17


>UNIPROTKB|E9PT19 [details] [associations]
            symbol:Helq "Protein Helq" species:10116 "Rattus
            norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 RGD:1560216
            GO:GO:0005524 GO:GO:0005730 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GeneTree:ENSGT00640000091272
            GO:GO:0008026 IPI:IPI00958253 Ensembl:ENSRNOT00000002974
            ArrayExpress:E9PT19 Uniprot:E9PT19
        Length = 879

 Score = 179 (68.1 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
 Identities = 70/266 (26%), Positives = 126/266 (47%)

Query:   815 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGL 873
             DE+H++ +  RG  LE  +A+ +   + TQ    ++G+SATL N +D+   L+ +  T  
Sbjct:   418 DELHMIGEGSRGATLEMTLAKVLYTSKTTQ----IIGMSATLNNVEDLQAFLKAEYYTSQ 473

Query:   874 FY-FD-NSFRPV-----ALEQQYI-GVTEKKALK-RF-----QVMNDIVYEKVMEHAGRN 919
             F   +   F  V      ++ + + G+T  + L  ++     +V  D +   V E     
Sbjct:   474 FRPVELKEFLKVNDTIYEVDSRAVDGMTFSRLLNYKYSDALKKVDPDRLVALVTEVIPNY 533

Query:   920 QLLVFVHSRKETGKTARAIRDMCLEKDTLGQFLREGSASMEVLRTEADQVKNGELRDLLP 979
               LVF  S+K     A  +    L +D L     E    ++ LR          L+  +P
Sbjct:   534 SCLVFCPSKKNCENVAEMLCKF-LSRDYLNHREEEKGELIKSLRNVGHGKVCPVLKRTIP 592

Query:   980 YGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVVDRT-LVEDLFAD 1038
             +G A HH+G+T  +R L+E+ ++   + +   T+TLA GVNLPA  V+ R   V + F  
Sbjct:   593 FGVAYHHSGLTSDERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILRAPYVANTFLK 652

Query:  1039 RH-IQVLVSTATLAWGVNLPAHTVII 1063
             R+  + ++  A  A G++    ++++
Sbjct:   653 RNQYKQMIGRAGRA-GIDTAGESILL 677

 Score = 157 (60.3 bits), Expect = 2.7e-16, Sum P(4) = 2.7e-16
 Identities = 68/238 (28%), Positives = 110/238 (46%)

Query:   996 LVEDLFADRHIQVL-VSTATLAWGV--NLPAHTVVDRTLVEDLFADRHIQVLVSTATLAW 1052
             L++ L    H +V  V   T+ +GV  +    T  +R L+E+ ++   + +   T+TLA 
Sbjct:   571 LIKSLRNVGHGKVCPVLKRTIPFGVAYHHSGLTSDERKLLEEAYSTGVLCLFTCTSTLAA 630

Query:  1053 GVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQMLGRAGRPQYDTKGEGVLITNHSELQ 1112
             GVNLPA  VI++   + N        L      QM+GRAGR   DT GE +L+    + Q
Sbjct:   631 GVNLPARRVILRAPYVAN------TFLKRNQYKQMIGRAGRAGIDTAGESILLLQEKDKQ 684

Query:  1113 YYLSLLNHQLP-VESQMISKLPDMLNAEIVLGTVQNLKDAVTWLGYTYLYIRMLRAPNLY 1171
               L L+N  L    S ++ +    + + + L  +  LK A + LG  Y ++       L+
Sbjct:   685 QVLGLINGPLEDCHSHLVEEFTKGIQS-LFLSLI-GLKIAES-LGDIYQFMN----GTLF 737

Query:  1172 GISHDAL-KEDPLLECHRADLIHTAAL-HLERSGLIKYDRKSG------HMQVTELGR 1221
             G+    L +E  L E      +   AL HL   GL++ D          H ++T+LG+
Sbjct:   738 GVQQKTLLREKSLWE------VTVGALEHLTEKGLLQKDSHGSPEESRCHFRITKLGQ 789

 Score = 106 (42.4 bits), Expect = 2.7e-16, Sum P(4) = 2.7e-16
 Identities = 34/112 (30%), Positives = 58/112 (51%)

Query:   532 INADEFKIIYVAPMR---SLVQEMV--GNFGK------DEIHLLHD-ERGPVLEALIART 579
             I   E K +Y+A +    SLV  ++  G  G       DE+H++ +  RG  LE  +A+ 
Sbjct:   380 IKRREKKSLYIATIEKGHSLVNALIETGRMGTLGLVVVDELHMIGEGSRGATLEMTLAKV 439

Query:   580 IRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLFYFDNSFRPVALEQ 631
             +   + TQ    ++G+SATL N +D+   L+ +      Y+ + FRPV L++
Sbjct:   440 LYTSKTTQ----IIGMSATLNNVEDLQAFLKAE------YYTSQFRPVELKE 481

 Score = 94 (38.1 bits), Expect = 2.7e-16, Sum P(4) = 2.7e-16
 Identities = 30/107 (28%), Positives = 47/107 (43%)

Query:   421 SHFMSNKRCELPDGSFRKQ-RKGYEEVHVPALKPKPMGPDETLVPIDKLPRYVQHAFEDF 479
             S    N R + P     KQ R+      +   +     P + L P   LP  V+  +   
Sbjct:   226 SAMTGNARAQTPAFPRSKQLRETLLSEEISVARKAIESPSDDLGPFYSLPSKVRDLYAQL 285

Query:   480 KTLNRI----QSRLCKSALESDENLLLCAPTGAGKTNVALLCMLQEI 522
             K + R+     + L  S+++  +NL+   PT  GKT VA + MLQE+
Sbjct:   286 KGIKRLYDWQHTCLTLSSVQERKNLIYSLPTSGGKTLVAEILMLQEL 332

 Score = 52 (23.4 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
 Identities = 11/21 (52%), Positives = 14/21 (66%)

Query:   758 FRLPRGAGKTNVALLCMLQEI 778
             + LP   GKT VA + MLQE+
Sbjct:   312 YSLPTSGGKTLVAEILMLQEL 332

 Score = 38 (18.4 bits), Expect = 2.7e-16, Sum P(4) = 2.7e-16
 Identities = 7/13 (53%), Positives = 9/13 (69%)

Query:   642 LKRFQVMNDIVYE 654
             LK F  +ND +YE
Sbjct:   479 LKEFLKVNDTIYE 491


>UNIPROTKB|I3L8F4 [details] [associations]
            symbol:I3L8F4 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] InterPro:IPR011545 Pfam:PF00270
            GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192
            GeneTree:ENSGT00700000104562 GO:GO:0008026 EMBL:CU468078
            Ensembl:ENSSSCT00000025178 OMA:CCILEIY Uniprot:I3L8F4
        Length = 115

 Score = 217 (81.4 bits), Expect = 2.9e-16, P = 2.9e-16
 Identities = 42/79 (53%), Positives = 58/79 (73%)

Query:   480 KTLNRIQSRLCKSALESDENLLLCAPTGAGKTNVALLCMLQEIGKHINADGTINADEFKI 539
             + LNRIQS + ++A  ++EN+L+CAPTGAGKTN+A+L +L EI +H    G I  +EFKI
Sbjct:     2 RRLNRIQSIVFETAYNTNENMLICAPTGAGKTNIAMLTVLHEIRQHFQ-QGVIKKNEFKI 60

Query:   540 IYVAPMRSLVQEMVGNFGK 558
             +YVAPM++L  EM   F K
Sbjct:    61 VYVAPMKALAAEMTNYFSK 79

 Score = 147 (56.8 bits), Expect = 8.1e-09, P = 8.1e-09
 Identities = 29/54 (53%), Positives = 37/54 (68%)

Query:   761 PRGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNFGK 814
             P GAGKTN+A+L +L EI +H    G I  +EFKI+YVAPM++L  EM   F K
Sbjct:    27 PTGAGKTNIAMLTVLHEIRQHFQ-QGVIKKNEFKIVYVAPMKALAAEMTNYFSK 79


>RGD|1309795 [details] [associations]
            symbol:Polq "polymerase (DNA directed), theta" species:10116
            "Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0003887 "DNA-directed DNA polymerase activity"
            evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0006260 "DNA replication" evidence=IEA] [GO:0006281 "DNA
            repair" evidence=ISO] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0043142 "single-stranded DNA-dependent ATPase
            activity" evidence=ISO] InterPro:IPR001098 InterPro:IPR001650
            InterPro:IPR002298 InterPro:IPR011545 InterPro:IPR012337
            InterPro:IPR019760 Pfam:PF00270 Pfam:PF00271 Pfam:PF00476
            PRINTS:PR00868 PROSITE:PS00447 PROSITE:PS51194 SMART:SM00482
            SMART:SM00490 RGD:1309795 GO:GO:0005524 GO:GO:0003677 GO:GO:0006260
            SUPFAM:SSF53098 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 GO:GO:0003887 OMA:CFSDESI IPI:IPI00362354
            Ensembl:ENSRNOT00000034841 UCSC:RGD:1309795 Uniprot:D4ABI8
        Length = 2540

 Score = 179 (68.1 bits), Expect = 2.7e-15, Sum P(4) = 2.7e-15
 Identities = 56/156 (35%), Positives = 82/156 (52%)

Query:  1014 TLAWGVNL--PAHTVVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNP 1071
             T+ WGV       T  +R ++E  F    I+VL +T+TL+ GVNLPA  VII+ T ++  
Sbjct:   409 TVPWGVAFHHAGLTFEERDIIEGAFRQGLIRVLAATSTLSSGVNLPARRVIIR-TPVFGG 467

Query:  1072 EKGRWVELGALDVLQMLGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQL-PVESQMIS 1130
             +      L  L   QM+GRAGR   DT GE +L+  +SE    ++LL   L PV S + S
Sbjct:   468 QP-----LDILTYKQMVGRAGRKGVDTMGESILVCKNSEKSKGIALLQGSLEPVHSCLQS 522

Query:  1131 K---LPDMLNA--EIVL-GTVQNLKDAVTWLGYTYL 1160
             +      M+ A  EI++ G     +D  T+   T+L
Sbjct:   523 QGEVTSTMIRAILEIIVSGVASTSQDMQTYAACTFL 558

 Score = 145 (56.1 bits), Expect = 5.0e-06, Sum P(4) = 5.0e-06
 Identities = 64/214 (29%), Positives = 107/214 (50%)

Query:   836 IRNIEATQEDVRLVG--LSATL--PNYKDVATLLRIKPETGLFYFDNSFRPVALEQQYIG 891
             I  + AT  +++LV   L+A L   +++ V  L  IK   G   +D+S +   L +++  
Sbjct:   262 IVGMSATLPNLQLVASWLNAELYHTDFRPVPLLESIK--VGNSIYDSSMK---LVREFQP 316

Query:   892 VTEKKALKRFQVMNDIVYEKVMEHAGRNQLLVFVHSRKETGKTARAI-RDMC-LEKDTLG 949
             + + K  +   V   + YE V ++   + +LVF  S+K   K A  I R+   L     G
Sbjct:   317 LLQVKGDEDHIV--SLCYETVRDN---HSVLVFCPSKKWCEKVADIIAREFYNLHHQPEG 371

Query:   950 QFLREGSASMEVLRTEA-----DQVKNGE------LRDLLPYGFAIHHAGMTRVDRTLVE 998
               ++       +L  ++     DQ+K         L++ +P+G A HHAG+T  +R ++E
Sbjct:   372 -LVKSSEFPPVILDQKSLLEVIDQLKRSPSGLDSVLKNTVPWGVAFHHAGLTFEERDIIE 430

Query:   999 DLFADRHIQVLVSTATLAWGVNLPAHTVVDRTLV 1032
               F    I+VL +T+TL+ GVNLPA  V+ RT V
Sbjct:   431 GAFRQGLIRVLAATSTLSSGVNLPARRVIIRTPV 464

 Score = 103 (41.3 bits), Expect = 2.7e-15, Sum P(4) = 2.7e-15
 Identities = 53/159 (33%), Positives = 79/159 (49%)

Query:   807 EMVGNFGKDEIHLLHDE-RGPVLEALIARTI---RNIEATQED--------VRLVGLSAT 854
             +++G    DE+H+L D  RG +LE L+ +     R   + Q D        V++VG+SAT
Sbjct:   209 DLLGTVVVDELHMLGDSHRGYLLELLLTKVCFVTRKSASCQADSASALACAVQIVGMSAT 268

Query:   855 LPNYKDVATLLRIKPETGLFYFDNSFRPVAL-EQQYIGVT----EKKALKRFQ----VMN 905
             LPN + VA+ L  +    L++ D  FRPV L E   +G +      K ++ FQ    V  
Sbjct:   269 LPNLQLVASWLNAE----LYHTD--FRPVPLLESIKVGNSIYDSSMKLVREFQPLLQVKG 322

Query:   906 D---IV---YEKVMEHAGRNQLLVFVHSRKETGKTARAI 938
             D   IV   YE V ++   + +LVF  S+K   K A  I
Sbjct:   323 DEDHIVSLCYETVRDN---HSVLVFCPSKKWCEKVADII 358

 Score = 101 (40.6 bits), Expect = 4.3e-15, Sum P(4) = 4.3e-15
 Identities = 47/156 (30%), Positives = 76/156 (48%)

Query:   551 EMVGNFGKDEIHLLHDE-RGPVLEALIARTI---RNIEATQED--------VRLVGLSAT 598
             +++G    DE+H+L D  RG +LE L+ +     R   + Q D        V++VG+SAT
Sbjct:   209 DLLGTVVVDELHMLGDSHRGYLLELLLTKVCFVTRKSASCQADSASALACAVQIVGMSAT 268

Query:   599 LPNYKDVATLLRIKPETGLFYFDNSFRPVAL-EQQYIGVT----EKKALKRFQVMNDIVY 653
             LPN + VA+ L  +    L++ D  FRPV L E   +G +      K ++ FQ +  +  
Sbjct:   269 LPNLQLVASWLNAE----LYHTD--FRPVPLLESIKVGNSIYDSSMKLVREFQPLLQVKG 322

Query:   654 EKVMEHAGRNQLLVSTLRVE---LTISPDFQWDEKL 686
             ++  +H     L   T+R     L   P  +W EK+
Sbjct:   323 DE--DHIV--SLCYETVRDNHSVLVFCPSKKWCEKV 354

 Score = 69 (29.3 bits), Expect = 2.7e-15, Sum P(4) = 2.7e-15
 Identities = 24/68 (35%), Positives = 36/68 (52%)

Query:   459 DETLVPIDKLPRYVQHAFEDF--KTLNRIQSR--LCKSALESDENLLLCAPTGAGKTNVA 514
             D+ L+    LP+ V   + +F  K +   Q+   L    LE  +NL+  APT AGKT VA
Sbjct:    68 DQLLLANWGLPKAVLEKYHNFGVKKMFEWQAECLLLGQVLEG-KNLVYSAPTSAGKTLVA 126

Query:   515 LLCMLQEI 522
              L +L+ +
Sbjct:   127 ELLILKRV 134

 Score = 54 (24.1 bits), Expect = 2.7e-15, Sum P(4) = 2.7e-15
 Identities = 29/111 (26%), Positives = 48/111 (43%)

Query:  1433 LRVELTISPDFQWDEKLHGGSEGF------WILVE-DVDSEAIR--LIQACVDVLSSNGW 1483
             LR+   +S D +  + L+ G++ F      W ++E D   + +R    Q C  ++   G 
Sbjct:  2286 LRILAHLSRDCRLIQVLNSGADVFRSIAAEWKMIEPDAVGDNLRQQAKQICYGIIYGMGA 2345

Query:  1484 LSPAVAAMEVAQMITQAMWSKDSY---LKQLPHFNADIIKRCTEKG-VETV 1530
              S     M + +    A    DS+    K + HF  D +K C   G VET+
Sbjct:  2346 KSLG-EQMGIKE--NDAACYIDSFKSRYKGINHFMRDTVKNCRRDGFVETI 2393

 Score = 45 (20.9 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
 Identities = 12/62 (19%), Positives = 28/62 (45%)

Query:   489 LCKSALESDENLLLCAPTGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSL 548
             LC   +  + ++L+  P+      VA +   +    H   +G + + EF  + +   +SL
Sbjct:   330 LCYETVRDNHSVLVFCPSKKWCEKVADIIAREFYNLHHQPEGLVKSSEFPPV-ILDQKSL 388

Query:   549 VQ 550
             ++
Sbjct:   389 LE 390

 Score = 44 (20.5 bits), Expect = 5.0e-06, Sum P(4) = 5.0e-06
 Identities = 27/88 (30%), Positives = 38/88 (43%)

Query:  1113 YYLSLLNHQLPVESQMISKL-PDMLNA--------EIVLGTVQNLKDAVTWLGYTYLYIR 1163
             YYLSL   Q   +S+M   L P  L+A        E +   +Q   D    +  TY +I+
Sbjct:  1865 YYLSLQKEQK--QSEMSPSLAPPPLDATLTVKERMEYLQSCLQKKSDQERSV-VTYDFIQ 1921

Query:  1164 MLRAPNLY-GISHDALKEDPLLECHRAD 1190
               +   L  GIS +   EDP + C   D
Sbjct:  1922 TYKVLLLSCGISLEPSYEDPKVACWLLD 1949

 Score = 41 (19.5 bits), Expect = 1.7e-12, Sum P(4) = 1.7e-12
 Identities = 9/21 (42%), Positives = 13/21 (61%)

Query:   758 FRLPRGAGKTNVALLCMLQEI 778
             +  P  AGKT VA L +L+ +
Sbjct:   114 YSAPTSAGKTLVAELLILKRV 134


>UNIPROTKB|D4A628 [details] [associations]
            symbol:Polq "Polymerase (DNA directed), theta (Predicted),
            isoform CRA_a" species:10116 "Rattus norvegicus" [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0006260 "DNA replication" evidence=IEA] [GO:0006281 "DNA
            repair" evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0043142 "single-stranded DNA-dependent ATPase
            activity" evidence=IEA] InterPro:IPR001098 InterPro:IPR001650
            InterPro:IPR002298 InterPro:IPR011545 InterPro:IPR012337
            InterPro:IPR019760 Pfam:PF00270 Pfam:PF00271 Pfam:PF00476
            PRINTS:PR00868 PROSITE:PS00447 PROSITE:PS51194 SMART:SM00482
            SMART:SM00490 RGD:1309795 GO:GO:0005524 GO:GO:0003677 GO:GO:0006260
            GO:GO:0006281 SUPFAM:SSF53098 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GeneTree:ENSGT00640000091272 GO:GO:0008026
            GO:GO:0003887 GO:GO:0043142 CTD:10721 KO:K02349 OrthoDB:EOG42RD6C
            EMBL:CH473967 IPI:IPI00949142 RefSeq:NP_001099348.1
            UniGene:Rn.131176 Ensembl:ENSRNOT00000063995 GeneID:288079
            KEGG:rno:288079 NextBio:627549 Uniprot:D4A628
        Length = 2547

 Score = 179 (68.1 bits), Expect = 2.7e-15, Sum P(4) = 2.7e-15
 Identities = 56/156 (35%), Positives = 82/156 (52%)

Query:  1014 TLAWGVNL--PAHTVVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNP 1071
             T+ WGV       T  +R ++E  F    I+VL +T+TL+ GVNLPA  VII+ T ++  
Sbjct:   409 TVPWGVAFHHAGLTFEERDIIEGAFRQGLIRVLAATSTLSSGVNLPARRVIIR-TPVFGG 467

Query:  1072 EKGRWVELGALDVLQMLGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQL-PVESQMIS 1130
             +      L  L   QM+GRAGR   DT GE +L+  +SE    ++LL   L PV S + S
Sbjct:   468 QP-----LDILTYKQMVGRAGRKGVDTMGESILVCKNSEKSKGIALLQGSLEPVHSCLQS 522

Query:  1131 K---LPDMLNA--EIVL-GTVQNLKDAVTWLGYTYL 1160
             +      M+ A  EI++ G     +D  T+   T+L
Sbjct:   523 QGEVTSTMIRAILEIIVSGVASTSQDMQTYAACTFL 558

 Score = 145 (56.1 bits), Expect = 5.0e-06, Sum P(4) = 5.0e-06
 Identities = 64/214 (29%), Positives = 107/214 (50%)

Query:   836 IRNIEATQEDVRLVG--LSATL--PNYKDVATLLRIKPETGLFYFDNSFRPVALEQQYIG 891
             I  + AT  +++LV   L+A L   +++ V  L  IK   G   +D+S +   L +++  
Sbjct:   262 IVGMSATLPNLQLVASWLNAELYHTDFRPVPLLESIK--VGNSIYDSSMK---LVREFQP 316

Query:   892 VTEKKALKRFQVMNDIVYEKVMEHAGRNQLLVFVHSRKETGKTARAI-RDMC-LEKDTLG 949
             + + K  +   V   + YE V ++   + +LVF  S+K   K A  I R+   L     G
Sbjct:   317 LLQVKGDEDHIV--SLCYETVRDN---HSVLVFCPSKKWCEKVADIIAREFYNLHHQPEG 371

Query:   950 QFLREGSASMEVLRTEA-----DQVKNGE------LRDLLPYGFAIHHAGMTRVDRTLVE 998
               ++       +L  ++     DQ+K         L++ +P+G A HHAG+T  +R ++E
Sbjct:   372 -LVKSSEFPPVILDQKSLLEVIDQLKRSPSGLDSVLKNTVPWGVAFHHAGLTFEERDIIE 430

Query:   999 DLFADRHIQVLVSTATLAWGVNLPAHTVVDRTLV 1032
               F    I+VL +T+TL+ GVNLPA  V+ RT V
Sbjct:   431 GAFRQGLIRVLAATSTLSSGVNLPARRVIIRTPV 464

 Score = 103 (41.3 bits), Expect = 2.7e-15, Sum P(4) = 2.7e-15
 Identities = 53/159 (33%), Positives = 79/159 (49%)

Query:   807 EMVGNFGKDEIHLLHDE-RGPVLEALIARTI---RNIEATQED--------VRLVGLSAT 854
             +++G    DE+H+L D  RG +LE L+ +     R   + Q D        V++VG+SAT
Sbjct:   209 DLLGTVVVDELHMLGDSHRGYLLELLLTKVCFVTRKSASCQADSASALACAVQIVGMSAT 268

Query:   855 LPNYKDVATLLRIKPETGLFYFDNSFRPVAL-EQQYIGVT----EKKALKRFQ----VMN 905
             LPN + VA+ L  +    L++ D  FRPV L E   +G +      K ++ FQ    V  
Sbjct:   269 LPNLQLVASWLNAE----LYHTD--FRPVPLLESIKVGNSIYDSSMKLVREFQPLLQVKG 322

Query:   906 D---IV---YEKVMEHAGRNQLLVFVHSRKETGKTARAI 938
             D   IV   YE V ++   + +LVF  S+K   K A  I
Sbjct:   323 DEDHIVSLCYETVRDN---HSVLVFCPSKKWCEKVADII 358

 Score = 101 (40.6 bits), Expect = 4.3e-15, Sum P(4) = 4.3e-15
 Identities = 47/156 (30%), Positives = 76/156 (48%)

Query:   551 EMVGNFGKDEIHLLHDE-RGPVLEALIARTI---RNIEATQED--------VRLVGLSAT 598
             +++G    DE+H+L D  RG +LE L+ +     R   + Q D        V++VG+SAT
Sbjct:   209 DLLGTVVVDELHMLGDSHRGYLLELLLTKVCFVTRKSASCQADSASALACAVQIVGMSAT 268

Query:   599 LPNYKDVATLLRIKPETGLFYFDNSFRPVAL-EQQYIGVT----EKKALKRFQVMNDIVY 653
             LPN + VA+ L  +    L++ D  FRPV L E   +G +      K ++ FQ +  +  
Sbjct:   269 LPNLQLVASWLNAE----LYHTD--FRPVPLLESIKVGNSIYDSSMKLVREFQPLLQVKG 322

Query:   654 EKVMEHAGRNQLLVSTLRVE---LTISPDFQWDEKL 686
             ++  +H     L   T+R     L   P  +W EK+
Sbjct:   323 DE--DHIV--SLCYETVRDNHSVLVFCPSKKWCEKV 354

 Score = 69 (29.3 bits), Expect = 2.7e-15, Sum P(4) = 2.7e-15
 Identities = 24/68 (35%), Positives = 36/68 (52%)

Query:   459 DETLVPIDKLPRYVQHAFEDF--KTLNRIQSR--LCKSALESDENLLLCAPTGAGKTNVA 514
             D+ L+    LP+ V   + +F  K +   Q+   L    LE  +NL+  APT AGKT VA
Sbjct:    68 DQLLLANWGLPKAVLEKYHNFGVKKMFEWQAECLLLGQVLEG-KNLVYSAPTSAGKTLVA 126

Query:   515 LLCMLQEI 522
              L +L+ +
Sbjct:   127 ELLILKRV 134

 Score = 54 (24.1 bits), Expect = 2.7e-15, Sum P(4) = 2.7e-15
 Identities = 29/111 (26%), Positives = 48/111 (43%)

Query:  1433 LRVELTISPDFQWDEKLHGGSEGF------WILVE-DVDSEAIR--LIQACVDVLSSNGW 1483
             LR+   +S D +  + L+ G++ F      W ++E D   + +R    Q C  ++   G 
Sbjct:  2293 LRILAHLSRDCRLIQVLNSGADVFRSIAAEWKMIEPDAVGDNLRQQAKQICYGIIYGMGA 2352

Query:  1484 LSPAVAAMEVAQMITQAMWSKDSY---LKQLPHFNADIIKRCTEKG-VETV 1530
              S     M + +    A    DS+    K + HF  D +K C   G VET+
Sbjct:  2353 KSLG-EQMGIKE--NDAACYIDSFKSRYKGINHFMRDTVKNCRRDGFVETI 2400

 Score = 45 (20.9 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
 Identities = 12/62 (19%), Positives = 28/62 (45%)

Query:   489 LCKSALESDENLLLCAPTGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSL 548
             LC   +  + ++L+  P+      VA +   +    H   +G + + EF  + +   +SL
Sbjct:   330 LCYETVRDNHSVLVFCPSKKWCEKVADIIAREFYNLHHQPEGLVKSSEFPPV-ILDQKSL 388

Query:   549 VQ 550
             ++
Sbjct:   389 LE 390

 Score = 44 (20.5 bits), Expect = 5.0e-06, Sum P(4) = 5.0e-06
 Identities = 27/88 (30%), Positives = 38/88 (43%)

Query:  1113 YYLSLLNHQLPVESQMISKL-PDMLNA--------EIVLGTVQNLKDAVTWLGYTYLYIR 1163
             YYLSL   Q   +S+M   L P  L+A        E +   +Q   D    +  TY +I+
Sbjct:  1872 YYLSLQKEQK--QSEMSPSLAPPPLDATLTVKERMEYLQSCLQKKSDQERSV-VTYDFIQ 1928

Query:  1164 MLRAPNLY-GISHDALKEDPLLECHRAD 1190
               +   L  GIS +   EDP + C   D
Sbjct:  1929 TYKVLLLSCGISLEPSYEDPKVACWLLD 1956

 Score = 41 (19.5 bits), Expect = 1.7e-12, Sum P(4) = 1.7e-12
 Identities = 9/21 (42%), Positives = 13/21 (61%)

Query:   758 FRLPRGAGKTNVALLCMLQEI 778
             +  P  AGKT VA L +L+ +
Sbjct:   114 YSAPTSAGKTLVAELLILKRV 134


>MGI|MGI:2176740 [details] [associations]
            symbol:Helq "helicase, POLQ-like" species:10090 "Mus
            musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0006200 "ATP catabolic process" evidence=ISO]
            [GO:0006259 "DNA metabolic process" evidence=ISO] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0017116 "single-stranded
            DNA-dependent ATP-dependent DNA helicase activity" evidence=ISO]
            [GO:0017117 "single-stranded DNA-dependent ATP-dependent DNA
            helicase complex" evidence=ISO] InterPro:IPR001650
            InterPro:IPR010995 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00490 MGI:MGI:2176740 GO:GO:0005524
            GO:GO:0005730 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 eggNOG:COG1204 GeneTree:ENSGT00640000091272
            SUPFAM:SSF47794 GO:GO:0017116 CTD:113510 OMA:SRPLENC
            OrthoDB:EOG4THVSJ EMBL:BC082601 EMBL:BC109169 EMBL:BC109170
            EMBL:AK052427 EMBL:AF436846 IPI:IPI00226287 IPI:IPI00886160
            IPI:IPI00890018 RefSeq:NP_001074576.1 UniGene:Mm.21469
            ProteinModelPortal:Q2VPA6 SMR:Q2VPA6 STRING:Q2VPA6
            PhosphoSite:Q2VPA6 PRIDE:Q2VPA6 Ensembl:ENSMUST00000044684
            GeneID:191578 KEGG:mmu:191578 UCSC:uc008yhz.1 UCSC:uc012dzs.1
            HOGENOM:HOG000110747 InParanoid:Q2VPA6 NextBio:371088 Bgee:Q2VPA6
            Genevestigator:Q2VPA6 GO:GO:0017117 Uniprot:Q2VPA6
        Length = 1069

 Score = 193 (73.0 bits), Expect = 5.0e-14, Sum P(2) = 5.0e-14
 Identities = 74/266 (27%), Positives = 128/266 (48%)

Query:   815 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGL 873
             DE+H++ +  RG +LE  +A+ +   + TQ    ++G+SATL N +D+   L+ +  T  
Sbjct:   422 DELHMIGEGSRGAILEMTLAKVLYTSKTTQ----IIGMSATLNNVEDLQAFLKAEYYTSQ 477

Query:   874 FY-FD-NSFRPV-----ALEQQYI-GVTEKKAL--KRFQVMN----DIVYEKVMEHAGRN 919
             F   +   F  V      ++ Q   G+T  + L  K  + +     D +   V E     
Sbjct:   478 FRPVELKEFLKVNDTIYEVDSQAADGMTFSRLLSYKYSEALKKMDPDRLVALVTEVIPNY 537

Query:   920 QLLVFVHSRKETGKTARAIRDMCLEKDTLGQFLREGSASMEVLRTEADQVKNGELRDLLP 979
               LVF  S+K     A  +    L KD L    +E    ++ LR   +      L+  +P
Sbjct:   538 SCLVFCPSKKNCENVAEMLCKF-LSKDYLNHREKEKCEVIKSLRNIGNGKVCPVLKRTVP 596

Query:   980 YGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVVDRT-LVEDLFAD 1038
             +G A HH+G+T  +R L+E+ ++   + +L  T+TLA GVNLPA  V+ R   V + F  
Sbjct:   597 FGIAYHHSGLTSEERKLLEEAYSTGVLCLLTCTSTLAAGVNLPARRVILRAPYVANTFLK 656

Query:  1039 RH-IQVLVSTATLAWGVNLPAHTVII 1063
             R+  + +V  A  A G++    ++++
Sbjct:   657 RNQYKQMVGRAGRA-GIDTAGESILL 681

 Score = 156 (60.0 bits), Expect = 1.1e-14, Sum P(4) = 1.1e-14
 Identities = 61/205 (29%), Positives = 97/205 (47%)

Query:  1025 TVVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDV 1084
             T  +R L+E+ ++   + +L  T+TLA GVNLPA  VI++   + N        L     
Sbjct:   607 TSEERKLLEEAYSTGVLCLLTCTSTLAAGVNLPARRVILRAPYVAN------TFLKRNQY 660

Query:  1085 LQMLGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVE-SQMISKLPDMLNAEIVLG 1143
              QM+GRAGR   DT GE +L+    + Q  L L++  L    S ++ +    + A + L 
Sbjct:   661 KQMVGRAGRAGIDTAGESILLLQEKDKQQVLELISGPLETCCSHLVEEFTKGIQA-LFLS 719

Query:  1144 TVQNLKDAVTWLGYTYLYIRMLRAPNLYGISHDAL-KEDPLLECHRADLIHTAALHLERS 1202
              +  LK A + LG  Y ++    +   +G+    L KE  L E    D +     HL   
Sbjct:   720 LI-GLKIAAS-LGDIYQFM----SGTFFGVQQKILLKEKSLWEI-TVDALE----HLTEK 768

Query:  1203 GLIKYDR---KSG---HMQVTELGR 1221
             GL++ D      G   H ++T+LG+
Sbjct:   769 GLLQKDSCGDNEGLECHFRITKLGQ 793

 Score = 103 (41.3 bits), Expect = 1.1e-14, Sum P(4) = 1.1e-14
 Identities = 24/74 (32%), Positives = 44/74 (59%)

Query:   559 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGL 617
             DE+H++ +  RG +LE  +A+ +   + TQ    ++G+SATL N +D+   L+ +     
Sbjct:   422 DELHMIGEGSRGAILEMTLAKVLYTSKTTQ----IIGMSATLNNVEDLQAFLKAE----- 472

Query:   618 FYFDNSFRPVALEQ 631
              Y+ + FRPV L++
Sbjct:   473 -YYTSQFRPVELKE 485

 Score = 86 (35.3 bits), Expect = 1.1e-14, Sum P(4) = 1.1e-14
 Identities = 28/107 (26%), Positives = 45/107 (42%)

Query:   421 SHFMSNKRCELPDGSFRKQ-RKGYEEVHVPALKPKPMGPDETLVPIDKLPRYVQHAFEDF 479
             S    N R + P     K  R+      +   K     P + L P   LP  V+  +   
Sbjct:   230 STMAGNARAQTPAFPRSKHLREALLSEEISVAKKAIESPSDDLGPFYSLPSKVRDLYVQL 289

Query:   480 KTLNRIQS--RLCKS--ALESDENLLLCAPTGAGKTNVALLCMLQEI 522
             K + ++      C +  +++  +NL+   PT  GKT VA + MLQE+
Sbjct:   290 KGIKKLYDWQHTCLTLRSVQERKNLIYSLPTSGGKTLVAEILMLQEL 336

 Score = 52 (23.4 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
 Identities = 11/21 (52%), Positives = 14/21 (66%)

Query:   758 FRLPRGAGKTNVALLCMLQEI 778
             + LP   GKT VA + MLQE+
Sbjct:   316 YSLPTSGGKTLVAEILMLQEL 336

 Score = 38 (18.4 bits), Expect = 1.1e-14, Sum P(4) = 1.1e-14
 Identities = 7/13 (53%), Positives = 9/13 (69%)

Query:   642 LKRFQVMNDIVYE 654
             LK F  +ND +YE
Sbjct:   483 LKEFLKVNDTIYE 495


>UNIPROTKB|F1PXD9 [details] [associations]
            symbol:POLQ "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GeneTree:ENSGT00640000091272
            GO:GO:0008026 EMBL:AAEX03017021 Ensembl:ENSCAFT00000018256
            OMA:NECHITF Uniprot:F1PXD9
        Length = 1835

 Score = 187 (70.9 bits), Expect = 1.3e-14, Sum P(4) = 1.3e-14
 Identities = 71/245 (28%), Positives = 113/245 (46%)

Query:  1014 TLAWGVNL--PAHTVVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNP 1071
             T+ WGV       T  +R ++E  F    I+VL +T+TL+ GVNLPA  VII+ T I+  
Sbjct:   317 TIPWGVAFHHAGLTFEERDIIEGAFRQGQIRVLAATSTLSSGVNLPARRVIIR-TPIFGG 375

Query:  1072 EKGRWVELGALDVLQMLGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQL-PVESQMIS 1130
             +      L  L   QM+GRAGR   DT GE +L+  +SE    ++LL   L PV S +  
Sbjct:   376 QP-----LDILTYKQMVGRAGRKGVDTVGESILVCKNSEKSKGIALLQGSLKPVRSCLQR 430

Query:  1131 KLPDMLNAEIVLGTVQNLKDAVTWLGY---TYLYIRMLRAPNLYGISHDALKEDPLLECH 1187
             +  + + A ++   ++ +   V        TY     L A         ++KE  L    
Sbjct:   431 QKGEEVTASMIRAILEIIVGGVASTSQDMQTYASCTFLAA---------SMKEGKLGSQK 481

Query:  1188 RADLIHTAALHLERSGLIKYDRKSGHMQVTELG--RIASHYYCTHETMATYNQLLKPTLS 1245
               D +   A+       + +  ++  +Q+TE G     + Y+ TH   AT +  L PT  
Sbjct:   482 NQDCVQLGAIE----ACVMWLLENEFIQITETGDGTEGTVYHPTHLGSATLSSSLSPT-D 536

Query:  1246 EIELF 1250
              +++F
Sbjct:   537 TLDIF 541

 Score = 145 (56.1 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
 Identities = 65/228 (28%), Positives = 107/228 (46%)

Query:   836 IRNIEATQEDVRLVG--LSATL--PNYKDVATLLRIKPETGLFYFDNSFRPVALEQQYIG 891
             I  + AT  ++ +V   L+A L   N++ V  L  +K   G   +D+S + V   Q  + 
Sbjct:   170 IVGMSATLPNLEIVASWLNAELYHTNFRPVPLLESVK--IGNSIYDSSMKLVREFQPNLQ 227

Query:   892 VTEKKALKRFQVMNDIVYEKVMEHAGRNQLLVFVHSRKETGKTARAIRDMC----LEKDT 947
             V   +      V++ + YE + ++   + +L+F  S+K   K A  I   C    L    
Sbjct:   228 VKGDED----HVVS-LCYETICDN---HSVLIFCPSKKWCEKLADIIA--CEFYNLHHQA 277

Query:   948 LGQFLREGSASMEVLRTEA-----DQVKNGE------LRDLLPYGFAIHHAGMTRVDRTL 996
              G  +R       VL  +      DQ+K         L+  +P+G A HHAG+T  +R +
Sbjct:   278 TG-LVRSSELPPVVLEQKGLLEVMDQLKRSPSGLDSVLQKTIPWGVAFHHAGLTFEERDI 336

Query:   997 VEDLFADRHIQVLVSTATLAWGVNLPAHTVVDRTLVEDLFADRHIQVL 1044
             +E  F    I+VL +T+TL+ GVNLPA  V+ RT    +F  + + +L
Sbjct:   337 IEGAFRQGQIRVLAATSTLSSGVNLPARRVIIRT---PIFGGQPLDIL 381

 Score = 96 (38.9 bits), Expect = 1.3e-14, Sum P(4) = 1.3e-14
 Identities = 51/159 (32%), Positives = 78/159 (49%)

Query:   807 EMVGNFGKDEIHLLHDE-RGPVLEALIART--IRNIEAT-QED--------VRLVGLSAT 854
             +++G    DE+H+L D  RG +LE L+ +   I +  A+ Q D        V++VG+SAT
Sbjct:   117 DLLGMVVVDELHMLGDSHRGYLLELLLTKICYITHKSASCQADLASPLSNAVQIVGMSAT 176

Query:   855 LPNYKDVATLLRIKPETGLFYFDNSFRPVAL-EQQYIGVT----EKKALKRFQ----VMN 905
             LPN + VA+ L  +      Y  N FRPV L E   IG +      K ++ FQ    V  
Sbjct:   177 LPNLEIVASWLNAE-----LYHTN-FRPVPLLESVKIGNSIYDSSMKLVREFQPNLQVKG 230

Query:   906 D------IVYEKVMEHAGRNQLLVFVHSRKETGKTARAI 938
             D      + YE + ++   + +L+F  S+K   K A  I
Sbjct:   231 DEDHVVSLCYETICDN---HSVLIFCPSKKWCEKLADII 266

 Score = 91 (37.1 bits), Expect = 4.0e-14, Sum P(4) = 4.0e-14
 Identities = 37/98 (37%), Positives = 53/98 (54%)

Query:   551 EMVGNFGKDEIHLLHDE-RGPVLEALIART--IRNIEAT-QED--------VRLVGLSAT 598
             +++G    DE+H+L D  RG +LE L+ +   I +  A+ Q D        V++VG+SAT
Sbjct:   117 DLLGMVVVDELHMLGDSHRGYLLELLLTKICYITHKSASCQADLASPLSNAVQIVGMSAT 176

Query:   599 LPNYKDVATLLRIKPETGLFYFDNSFRPVAL-EQQYIG 635
             LPN + VA+ L  +      Y  N FRPV L E   IG
Sbjct:   177 LPNLEIVASWLNAE-----LYHTN-FRPVPLLESVKIG 208

 Score = 65 (27.9 bits), Expect = 1.3e-14, Sum P(4) = 1.3e-14
 Identities = 17/34 (50%), Positives = 21/34 (61%)

Query:   489 LCKSALESDENLLLCAPTGAGKTNVALLCMLQEI 522
             L    LE  +NL+  APT AGKT VA L ML+ +
Sbjct:    10 LLGQVLEG-KNLVYSAPTSAGKTLVAELLMLKRV 42

 Score = 45 (20.9 bits), Expect = 1.3e-12, Sum P(4) = 1.3e-12
 Identities = 10/21 (47%), Positives = 13/21 (61%)

Query:   758 FRLPRGAGKTNVALLCMLQEI 778
             +  P  AGKT VA L ML+ +
Sbjct:    22 YSAPTSAGKTLVAELLMLKRV 42

 Score = 44 (20.5 bits), Expect = 1.3e-14, Sum P(4) = 1.3e-14
 Identities = 10/20 (50%), Positives = 15/20 (75%)

Query:  1619 PKTNSLLSIKRLTLQQKAKI 1638
             P+TN   S KRLTL++K+ +
Sbjct:   834 PQTNG--SCKRLTLKKKSNL 851


>UNIPROTKB|O75417 [details] [associations]
            symbol:POLQ "DNA polymerase theta" species:9606 "Homo
            sapiens" [GO:0006260 "DNA replication" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
            [GO:0003887 "DNA-directed DNA polymerase activity" evidence=IDA]
            [GO:0043142 "single-stranded DNA-dependent ATPase activity"
            evidence=IDA] [GO:0003684 "damaged DNA binding" evidence=TAS]
            [GO:0005654 "nucleoplasm" evidence=TAS] InterPro:IPR001098
            InterPro:IPR001650 InterPro:IPR002298 InterPro:IPR011545
            InterPro:IPR012337 InterPro:IPR019760 Pfam:PF00270 Pfam:PF00271
            Pfam:PF00476 PRINTS:PR00868 PROSITE:PS00447 PROSITE:PS51194
            SMART:SM00482 SMART:SM00490 GO:GO:0005524 GO:GO:0005654
            GO:GO:0003684 GO:GO:0006260 GO:GO:0006281 SUPFAM:SSF53098
            EMBL:AC069239 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            eggNOG:COG1204 GO:GO:0008026 GO:GO:0003887 GO:GO:0043142
            EMBL:AF052573 EMBL:AY338826 EMBL:AC079841 EMBL:AF043628
            IPI:IPI00794779 IPI:IPI01012356 RefSeq:NP_955452.3
            UniGene:Hs.241517 ProteinModelPortal:O75417 STRING:O75417
            PhosphoSite:O75417 PaxDb:O75417 PRIDE:O75417 DNASU:10721
            Ensembl:ENST00000264233 GeneID:10721 KEGG:hsa:10721 UCSC:uc003eed.3
            UCSC:uc003eee.4 CTD:10721 GeneCards:GC03M121150 H-InvDB:HIX0030706
            HGNC:HGNC:9186 HPA:HPA048931 MIM:604419 neXtProt:NX_O75417
            PharmGKB:PA33506 HOGENOM:HOG000146444 HOVERGEN:HBG005525 KO:K02349
            OrthoDB:EOG42RD6C ChEMBL:CHEMBL6025 GenomeRNAi:10721 NextBio:40701
            ArrayExpress:O75417 Bgee:O75417 CleanEx:HS_POLH CleanEx:HS_POLQ
            Genevestigator:O75417 GermOnline:ENSG00000051341 Uniprot:O75417
        Length = 2590

 Score = 179 (68.1 bits), Expect = 4.1e-14, Sum P(3) = 4.1e-14
 Identities = 60/162 (37%), Positives = 88/162 (54%)

Query:  1014 TLAWGVNL--PAHTVVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNP 1071
             T+ WGV       T  +R ++E  F    I+VL +T+TL+ GVNLPA  VII+ T I+  
Sbjct:   408 TVPWGVAFHHAGLTFEERDIIEGAFRQGLIRVLAATSTLSSGVNLPARRVIIR-TPIFG- 465

Query:  1072 EKGRWVELGALDVLQMLGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQL-PVESQMIS 1130
               GR +++  L   QM+GRAGR   DT GE +LI  +SE    ++LL   L PV S +  
Sbjct:   466 --GRPLDI--LTYKQMVGRAGRKGVDTVGESILICKNSEKSKGIALLQGSLKPVRSCLQR 521

Query:  1131 KLPD-----MLNA--EIVLGTVQNL-KDAVTWLGYTYLYIRM 1164
             +  +     M+ A  EI++G V +  +D  T+   T+L   M
Sbjct:   522 REGEEVTGSMIRAILEIIVGGVASTSQDMHTYAACTFLAASM 563

 Score = 140 (54.3 bits), Expect = 4.4e-10, Sum P(3) = 4.4e-10
 Identities = 30/71 (42%), Positives = 45/71 (63%)

Query:   974 LRDLLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVVDRTLVE 1033
             L+  +P+G A HHAG+T  +R ++E  F    I+VL +T+TL+ GVNLPA  V+ RT   
Sbjct:   405 LQKTVPWGVAFHHAGLTFEERDIIEGAFRQGLIRVLAATSTLSSGVNLPARRVIIRT--- 461

Query:  1034 DLFADRHIQVL 1044
              +F  R + +L
Sbjct:   462 PIFGGRPLDIL 472

 Score = 97 (39.2 bits), Expect = 4.1e-14, Sum P(3) = 4.1e-14
 Identities = 47/156 (30%), Positives = 75/156 (48%)

Query:   551 EMVGNFGKDEIHLLHDE-RGPVLEALIARTI---RNIEATQED--------VRLVGLSAT 598
             +++G    DE+H+L D  RG +LE L+ +     R   + Q D        V++VG+SAT
Sbjct:   208 DLLGMVVVDELHMLGDSHRGYLLELLLTKICYITRKSASCQADLASSLSNAVQIVGMSAT 267

Query:   599 LPNYKDVATLLRIKPETGLFYFDNSFRPVAL-EQQYIGVT----EKKALKRFQVMNDIVY 653
             LPN + VA+ L  +    L++ D  FRPV L E   +G +      K ++ F+ M  +  
Sbjct:   268 LPNLELVASWLNAE----LYHTD--FRPVPLLESVKVGNSIYDSSMKLVREFEPMLQVKG 321

Query:   654 EKVMEHAGRNQLLVSTL---RVELTISPDFQWDEKL 686
             ++  +H     L   T+      L   P  +W EKL
Sbjct:   322 DE--DHVV--SLCYETICDNHSVLLFCPSKKWCEKL 353

 Score = 96 (38.9 bits), Expect = 5.1e-14, Sum P(3) = 5.1e-14
 Identities = 49/159 (30%), Positives = 78/159 (49%)

Query:   807 EMVGNFGKDEIHLLHDE-RGPVLEALIARTI---RNIEATQED--------VRLVGLSAT 854
             +++G    DE+H+L D  RG +LE L+ +     R   + Q D        V++VG+SAT
Sbjct:   208 DLLGMVVVDELHMLGDSHRGYLLELLLTKICYITRKSASCQADLASSLSNAVQIVGMSAT 267

Query:   855 LPNYKDVATLLRIKPETGLFYFDNSFRPVAL-EQQYIGVT----EKKALKRF----QVMN 905
             LPN + VA+ L  +    L++ D  FRPV L E   +G +      K ++ F    QV  
Sbjct:   268 LPNLELVASWLNAE----LYHTD--FRPVPLLESVKVGNSIYDSSMKLVREFEPMLQVKG 321

Query:   906 D------IVYEKVMEHAGRNQLLVFVHSRKETGKTARAI 938
             D      + YE + ++   + +L+F  S+K   K A  I
Sbjct:   322 DEDHVVSLCYETICDN---HSVLLFCPSKKWCEKLADII 357

 Score = 67 (28.6 bits), Expect = 4.1e-14, Sum P(3) = 4.1e-14
 Identities = 24/68 (35%), Positives = 35/68 (51%)

Query:   459 DETLVPIDKLPRYVQHAFEDF--KTLNRIQSR--LCKSALESDENLLLCAPTGAGKTNVA 514
             D+ L+    LP+ V   +  F  K +   Q+   L    LE  +NL+  APT AGKT VA
Sbjct:    67 DKLLLANWGLPKAVLEKYHSFGVKKMFEWQAECLLLGQVLEG-KNLVYSAPTSAGKTLVA 125

Query:   515 LLCMLQEI 522
              L +L+ +
Sbjct:   126 ELLILKRV 133

 Score = 41 (19.5 bits), Expect = 2.2e-11, Sum P(3) = 2.2e-11
 Identities = 9/21 (42%), Positives = 13/21 (61%)

Query:   758 FRLPRGAGKTNVALLCMLQEI 778
             +  P  AGKT VA L +L+ +
Sbjct:   113 YSAPTSAGKTLVAELLILKRV 133


>UNIPROTKB|E9PSY5 [details] [associations]
            symbol:Helq "Protein Helq" species:10116 "Rattus
            norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 RGD:1560216 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            IPI:IPI01007603 Ensembl:ENSRNOT00000031633 ArrayExpress:E9PSY5
            Uniprot:E9PSY5
        Length = 805

 Score = 179 (68.1 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
 Identities = 70/266 (26%), Positives = 126/266 (47%)

Query:   815 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGL 873
             DE+H++ +  RG  LE  +A+ +   + TQ    ++G+SATL N +D+   L+ +  T  
Sbjct:   418 DELHMIGEGSRGATLEMTLAKVLYTSKTTQ----IIGMSATLNNVEDLQAFLKAEYYTSQ 473

Query:   874 FY-FD-NSFRPV-----ALEQQYI-GVTEKKALK-RF-----QVMNDIVYEKVMEHAGRN 919
             F   +   F  V      ++ + + G+T  + L  ++     +V  D +   V E     
Sbjct:   474 FRPVELKEFLKVNDTIYEVDSRAVDGMTFSRLLNYKYSDALKKVDPDRLVALVTEVIPNY 533

Query:   920 QLLVFVHSRKETGKTARAIRDMCLEKDTLGQFLREGSASMEVLRTEADQVKNGELRDLLP 979
               LVF  S+K     A  +    L +D L     E    ++ LR          L+  +P
Sbjct:   534 SCLVFCPSKKNCENVAEMLCKF-LSRDYLNHREEEKGELIKSLRNVGHGKVCPVLKRTIP 592

Query:   980 YGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVVDRT-LVEDLFAD 1038
             +G A HH+G+T  +R L+E+ ++   + +   T+TLA GVNLPA  V+ R   V + F  
Sbjct:   593 FGVAYHHSGLTSDERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILRAPYVANTFLK 652

Query:  1039 RH-IQVLVSTATLAWGVNLPAHTVII 1063
             R+  + ++  A  A G++    ++++
Sbjct:   653 RNQYKQMIGRAGRA-GIDTAGESILL 677

 Score = 134 (52.2 bits), Expect = 4.6e-14, Sum P(4) = 4.6e-14
 Identities = 43/130 (33%), Positives = 65/130 (50%)

Query:   996 LVEDLFADRHIQVL-VSTATLAWGV--NLPAHTVVDRTLVEDLFADRHIQVLVSTATLAW 1052
             L++ L    H +V  V   T+ +GV  +    T  +R L+E+ ++   + +   T+TLA 
Sbjct:   571 LIKSLRNVGHGKVCPVLKRTIPFGVAYHHSGLTSDERKLLEEAYSTGVLCLFTCTSTLAA 630

Query:  1053 GVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQMLGRAGRPQYDTKGEGVLITNHSELQ 1112
             GVNLPA  VI++   + N        L      QM+GRAGR   DT GE +L+    + Q
Sbjct:   631 GVNLPARRVILRAPYVAN------TFLKRNQYKQMIGRAGRAGIDTAGESILLLQEKDKQ 684

Query:  1113 YYLSLLNHQL 1122
               L L+N  L
Sbjct:   685 QVLGLINGPL 694

 Score = 106 (42.4 bits), Expect = 4.6e-14, Sum P(4) = 4.6e-14
 Identities = 34/112 (30%), Positives = 58/112 (51%)

Query:   532 INADEFKIIYVAPMR---SLVQEMV--GNFGK------DEIHLLHD-ERGPVLEALIART 579
             I   E K +Y+A +    SLV  ++  G  G       DE+H++ +  RG  LE  +A+ 
Sbjct:   380 IKRREKKSLYIATIEKGHSLVNALIETGRMGTLGLVVVDELHMIGEGSRGATLEMTLAKV 439

Query:   580 IRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLFYFDNSFRPVALEQ 631
             +   + TQ    ++G+SATL N +D+   L+ +      Y+ + FRPV L++
Sbjct:   440 LYTSKTTQ----IIGMSATLNNVEDLQAFLKAE------YYTSQFRPVELKE 481

 Score = 94 (38.1 bits), Expect = 4.6e-14, Sum P(4) = 4.6e-14
 Identities = 30/107 (28%), Positives = 47/107 (43%)

Query:   421 SHFMSNKRCELPDGSFRKQ-RKGYEEVHVPALKPKPMGPDETLVPIDKLPRYVQHAFEDF 479
             S    N R + P     KQ R+      +   +     P + L P   LP  V+  +   
Sbjct:   226 SAMTGNARAQTPAFPRSKQLRETLLSEEISVARKAIESPSDDLGPFYSLPSKVRDLYAQL 285

Query:   480 KTLNRI----QSRLCKSALESDENLLLCAPTGAGKTNVALLCMLQEI 522
             K + R+     + L  S+++  +NL+   PT  GKT VA + MLQE+
Sbjct:   286 KGIKRLYDWQHTCLTLSSVQERKNLIYSLPTSGGKTLVAEILMLQEL 332

 Score = 52 (23.4 bits), Expect = 0.00013, Sum P(2) = 0.00013
 Identities = 11/21 (52%), Positives = 14/21 (66%)

Query:   758 FRLPRGAGKTNVALLCMLQEI 778
             + LP   GKT VA + MLQE+
Sbjct:   312 YSLPTSGGKTLVAEILMLQEL 332

 Score = 38 (18.4 bits), Expect = 4.6e-14, Sum P(4) = 4.6e-14
 Identities = 7/13 (53%), Positives = 9/13 (69%)

Query:   642 LKRFQVMNDIVYE 654
             LK F  +ND +YE
Sbjct:   479 LKEFLKVNDTIYE 491


>UNIPROTKB|F1RVE2 [details] [associations]
            symbol:HELQ "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR010995
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005730 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GeneTree:ENSGT00640000091272 SUPFAM:SSF47794 GO:GO:0008026
            OMA:SRPLENC EMBL:CU467102 EMBL:CU468150 Ensembl:ENSSSCT00000010115
            Uniprot:F1RVE2
        Length = 1103

 Score = 174 (66.3 bits), Expect = 5.5e-12, Sum P(2) = 5.5e-12
 Identities = 76/285 (26%), Positives = 135/285 (47%)

Query:   801 MRSLVQE-MVGNFGK---DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATL 855
             + SL++   +G  G    DE+H++ +  RG  LE  +A+ +   + TQ    +VG+SATL
Sbjct:   447 VNSLIETGRIGGLGLVVVDELHMIGEGSRGATLEMTLAKILYTSKTTQ----IVGMSATL 502

Query:   856 PNYKDVATLLRIKPETGLF-------YF--DNSFRPVALEQQYIGVTEKKAL--KRFQVM 904
              N +D+   LR +  +  F       Y   +++   V  + +  G+T  + L  K    +
Sbjct:   503 NNVEDLQAFLRAEYYSSWFRPVELKEYLKINDTIYEVDSKAEN-GMTFSRLLNYKYSDTL 561

Query:   905 N----DIVYEKVMEHAGRNQLLVFVHSRKETGKTARAIRDMCLEKDTLGQFLREGSASME 960
                  D +   V E    +  LVF  ++K     A  I  + L K+ L    +E    ++
Sbjct:   562 KKLDPDHLVALVTEVIPNHSCLVFCPTKKNCENVAEMICKI-LSKEYLKHREKEKHELLK 620

Query:   961 VLRTEADQVKNGELRDLLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVN 1020
              L+  +       L+  +P+G A HH+G+T  +R L+E+  +   + +L  T+TLA GVN
Sbjct:   621 NLKAISGGSVCPVLKHTIPFGVAYHHSGLTNDERKLLEEAHSAGVLCLLTCTSTLAAGVN 680

Query:  1021 LPAHTVVDRT-LVEDLFADRH-IQVLVSTATLAWGVNLPAHTVII 1063
             LPA  V+ R   V   F  R+  + ++  A  A G++    +++I
Sbjct:   681 LPAQRVILRAPYVAKEFLKRNQYKQMIGRAGRA-GIDSVGESILI 724

 Score = 131 (51.2 bits), Expect = 1.4e-13, Sum P(3) = 1.4e-13
 Identities = 55/198 (27%), Positives = 94/198 (47%)

Query:  1028 DRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQM 1087
             +R L+E+  +   + +L  T+TLA GVNLPA  VI++   +      R          QM
Sbjct:   653 ERKLLEEAHSAGVLCLLTCTSTLAAGVNLPAQRVILRAPYVAKEFLKR------NQYKQM 706

Query:  1088 LGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLP-VESQMISKLPDMLNAEIVLGTVQ 1146
             +GRAGR   D+ GE +LI    + Q  L L++  L    S+++ +    +   + L  + 
Sbjct:   707 IGRAGRAGIDSVGESILIFQEKDKQQVLELISRPLENCYSRLVQEFTKGIQT-LFLSLI- 764

Query:  1147 NLKDAVTWLGYTYLYIRMLRAPNLYGISHDAL-KEDPLLECHRADLIH-TAALHLERSGL 1204
              LK A T LG  Y ++    +   +G+    L KE  L E     L + T    L++  +
Sbjct:   765 GLKIATT-LGDIYHFM----SGTFFGVQQKILLKEKSLWEITVESLRYLTEKGLLQKDTV 819

Query:  1205 IKYDRKSGH-MQVTELGR 1221
             +  + +  +  ++T+LGR
Sbjct:   820 LGSEEEFQYSFRITKLGR 837

 Score = 110 (43.8 bits), Expect = 1.4e-13, Sum P(3) = 1.4e-13
 Identities = 37/119 (31%), Positives = 62/119 (52%)

Query:   532 INADEFKIIYVAPMR---SLVQEMV--GNFGK------DEIHLLHD-ERGPVLEALIART 579
             I   E K +Y+A +    SLV  ++  G  G       DE+H++ +  RG  LE  +A+ 
Sbjct:   427 IKRREKKSLYIATIEKGHSLVNSLIETGRIGGLGLVVVDELHMIGEGSRGATLEMTLAKI 486

Query:   580 IRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLFYFDNSFRPVALEQQYIGVTE 638
             +   + TQ    +VG+SATL N +D+   LR +      Y+ + FRPV L++ Y+ + +
Sbjct:   487 LYTSKTTQ----IVGMSATLNNVEDLQAFLRAE------YYSSWFRPVELKE-YLKIND 534

 Score = 86 (35.3 bits), Expect = 1.4e-13, Sum P(3) = 1.4e-13
 Identities = 26/83 (31%), Positives = 43/83 (51%)

Query:   444 EEVHVPALKPKPMGPDETLVPIDKLPRYVQHAFEDFKTLNRIQS--RLCKS--ALESDEN 499
             EE++V A K      D+ L P   LP  V+  +  F+ + ++      C +  +++  +N
Sbjct:   299 EEINV-AKKTIASSSDD-LGPFYSLPSKVRDLYAQFRGIEKLYEWQHTCLTLKSVQERKN 356

Query:   500 LLLCAPTGAGKTNVALLCMLQEI 522
             L+   PT  GKT VA + MLQE+
Sbjct:   357 LIYSLPTSGGKTLVAEILMLQEL 379

 Score = 52 (23.4 bits), Expect = 0.00055, Sum P(2) = 0.00055
 Identities = 11/21 (52%), Positives = 14/21 (66%)

Query:   758 FRLPRGAGKTNVALLCMLQEI 778
             + LP   GKT VA + MLQE+
Sbjct:   359 YSLPTSGGKTLVAEILMLQEL 379


>UNIPROTKB|E2RST3 [details] [associations]
            symbol:HELQ "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GeneTree:ENSGT00640000091272
            GO:GO:0008026 OMA:SRPLENC EMBL:AAEX03016730
            Ensembl:ENSCAFT00000014486 Uniprot:E2RST3
        Length = 1106

 Score = 165 (63.1 bits), Expect = 5.8e-12, Sum P(2) = 5.8e-12
 Identities = 73/271 (26%), Positives = 128/271 (47%)

Query:   815 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGL 873
             DE+H++ +  RG +LE  +A+ +   + TQ    ++G+SATL N +D+   L+ +  T  
Sbjct:   469 DELHMIGEGSRGAILEMTLAKVLYTSKTTQ----IIGMSATLTNVEDLQKFLQAEYYTSQ 524

Query:   874 F-------YF--DNSFRPVALEQQYIGVTEKKALK-----RFQVMN-DIVYEKVMEHAGR 918
             F       Y   +++   V  + +  G+T  + L        + M+ D +     E    
Sbjct:   525 FRPVELKEYLKINDAIYEVDSKAEN-GMTFSRLLNCQYSDTLKKMDPDHLVALATEVIPN 583

Query:   919 NQLLVFVHSRKETGKTARAIRDMCLEKDTLGQFLREGSASMEVLRTEADQVKNGELRDLL 978
             +  LVF  ++K     A  I    L K  L    RE     EV++     + +G L  +L
Sbjct:   584 HSCLVFCPTKKNCENVAEMICRF-LSKQYLKH--RE-KEKHEVIKN-LKNISSGNLCPIL 638

Query:   979 ----PYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVVDRT-LVE 1033
                 P+G A HH+G+T  +R L+E+ ++   + +   T+TLA GVNLPA  V+ R   V 
Sbjct:   639 KRTIPFGVAYHHSGLTSDERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILRAPYVA 698

Query:  1034 DLFADRH-IQVLVSTATLAWGVNLPAHTVII 1063
               F  R+  + ++  A  A G++    +++I
Sbjct:   699 KEFLKRNQYKQMIGRAGRA-GIDSIGESILI 728

 Score = 125 (49.1 bits), Expect = 2.3e-13, Sum P(3) = 2.3e-13
 Identities = 43/160 (26%), Positives = 79/160 (49%)

Query:  1028 DRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQM 1087
             +R L+E+ ++   + +   T+TLA GVNLPA  VI++   +      R          QM
Sbjct:   657 ERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILRAPYVAKEFLKR------NQYKQM 710

Query:  1088 LGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLP-VESQMISK----LPDMLNAEIVL 1142
             +GRAGR   D+ GE +LI    + Q  L L++  L    S ++ +    +  +  + I L
Sbjct:   711 IGRAGRAGIDSIGESILILQEKDKQQVLELISRPLENCYSHLVQEFTKGIQTLFLSLIGL 770

Query:  1143 GTVQNLKDAVTWLGYTYLYIR---MLRAPNLYGISHDALK 1179
                 NL D   ++  T+  ++   +L+  +L+ I+ ++L+
Sbjct:   771 KIATNLDDIYHFMCGTFFGVQQKILLQEKSLWDITIESLR 810

 Score = 105 (42.0 bits), Expect = 2.3e-13, Sum P(3) = 2.3e-13
 Identities = 25/81 (30%), Positives = 48/81 (59%)

Query:   559 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGL 617
             DE+H++ +  RG +LE  +A+ +   + TQ    ++G+SATL N +D+   L+ +     
Sbjct:   469 DELHMIGEGSRGAILEMTLAKVLYTSKTTQ----IIGMSATLTNVEDLQKFLQAE----- 519

Query:   618 FYFDNSFRPVALEQQYIGVTE 638
              Y+ + FRPV L++ Y+ + +
Sbjct:   520 -YYTSQFRPVELKE-YLKIND 538

 Score = 95 (38.5 bits), Expect = 2.3e-13, Sum P(3) = 2.3e-13
 Identities = 34/109 (31%), Positives = 53/109 (48%)

Query:   421 SHFMSNKRCELPDGSFRKQRKGY---EEVHVPALKPKPMGPDETLVPIDKLPRYVQHAFE 477
             S    N + + P  S  KQ K     EE++V A K      D+ L P   LP  V+  + 
Sbjct:   277 SAMTGNAKAQTPVFSRTKQLKETLLSEEINV-AKKAIESSSDD-LGPFYSLPTKVRDLYV 334

Query:   478 DFKTLNRI----QSRLCKSALESDENLLLCAPTGAGKTNVALLCMLQEI 522
              FK + ++     + L  ++++  +NL+   PT  GKT VA + MLQE+
Sbjct:   335 QFKGIEKLYEWQHTCLTLNSVQERKNLIYSLPTSGGKTLVAEILMLQEL 383


>UNIPROTKB|E3W980 [details] [associations]
            symbol:HELQ "Helicase POLQ-like" species:9606 "Homo
            sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
            Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005730 GO:GO:0003676 GO:GO:0004386 EMBL:AC096768
            HGNC:HGNC:18536 IPI:IPI00965172 ProteinModelPortal:E3W980
            SMR:E3W980 Ensembl:ENST00000510985 UCSC:uc010ikb.3
            ArrayExpress:E3W980 Bgee:E3W980 Uniprot:E3W980
        Length = 1034

 Score = 180 (68.4 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
 Identities = 89/328 (27%), Positives = 151/328 (46%)

Query:   758 FRLPRGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNFGKDEI 817
             + LP   GKT VA + MLQE+            D   ++ + P  ++VQE        ++
Sbjct:   357 YSLPTSGGKTLVAEILMLQELL-------CCRKD---VLMILPYVAIVQE--------KL 398

Query:   818 HLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLF-- 874
             H++ +  RG  LE  +A+ +   + TQ    ++G+SATL N +D+   L+ +  T  F  
Sbjct:   399 HMIGEGSRGATLEMTLAKILYTSKTTQ----IIGMSATLNNVEDLQKFLQAEYYTSQFRP 454

Query:   875 -----YF--DNSFRPVALEQQYIGVTEKKALK-----RFQVMN-DIVYEKVMEHAGRNQL 921
                  Y   +++   V  + +  G+T  + L        + M+ D +   V E       
Sbjct:   455 VELKEYLKINDTIYEVDSKAEN-GMTFSRLLNYKYSDTLKKMDPDHLVALVTEVIPNYSC 513

Query:   922 LVFVHSRKETGKTARAIRDMCLEKDTLGQFLREGSASMEVLRTEADQVKNGELRDLL--- 978
             LVF  S+K     A  I    L K+ L    +E     EV++     + NG L  +L   
Sbjct:   514 LVFCPSKKNCENVAEMICKF-LSKEYLKHKEKE---KCEVIKN-LKNIGNGNLCPVLKRT 568

Query:   979 -PYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVVDRT-LVEDLF 1036
              P+G A HH+G+T  +R L+E+ ++   + +   T+TLA GVNLPA  V+ R   V   F
Sbjct:   569 IPFGVAYHHSGLTSDERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILRAPYVAKEF 628

Query:  1037 ADRH-IQVLVSTATLAWGVNLPAHTVII 1063
               R+  + ++  A  A G++    +++I
Sbjct:   629 LKRNQYKQMIGRAGRA-GIDTIGESILI 655

 Score = 130 (50.8 bits), Expect = 1.8e-12, Sum P(3) = 1.8e-12
 Identities = 44/160 (27%), Positives = 78/160 (48%)

Query:  1028 DRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQM 1087
             +R L+E+ ++   + +   T+TLA GVNLPA  VI++   +      R          QM
Sbjct:   584 ERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILRAPYVAKEFLKR------NQYKQM 637

Query:  1088 LGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLP-VESQMISK----LPDMLNAEIVL 1142
             +GRAGR   DT GE +LI    + Q  L L+   L    S ++ +    +  +  + I L
Sbjct:   638 IGRAGRAGIDTIGESILILQEKDKQQVLELITKPLENCYSHLVQEFTKGIQTLFLSLIGL 697

Query:  1143 GTVQNLKDAVTWLGYTYLYIR---MLRAPNLYGISHDALK 1179
                 NL D   ++  T+  ++   +L+  +L+ I+ ++L+
Sbjct:   698 KIATNLDDIYHFMNGTFFGVQQKVLLKEKSLWEITVESLR 737

 Score = 93 (37.8 bits), Expect = 1.8e-12, Sum P(3) = 1.8e-12
 Identities = 23/82 (28%), Positives = 48/82 (58%)

Query:   558 KDEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETG 616
             ++++H++ +  RG  LE  +A+ +   + TQ    ++G+SATL N +D+   L+ +    
Sbjct:   395 QEKLHMIGEGSRGATLEMTLAKILYTSKTTQ----IIGMSATLNNVEDLQKFLQAE---- 446

Query:   617 LFYFDNSFRPVALEQQYIGVTE 638
               Y+ + FRPV L++ Y+ + +
Sbjct:   447 --YYTSQFRPVELKE-YLKIND 465

 Score = 92 (37.4 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
 Identities = 32/104 (30%), Positives = 52/104 (50%)

Query:   426 NKRCELPDGSFRKQRKGY---EEVHVPALKPKPMGPDETLVPIDKLPRYVQHAFEDFKTL 482
             N + + P  S  KQ K     EE++V A K      ++ L P   LP  V+  +  FK +
Sbjct:   276 NAKAQTPIFSRSKQLKDTLLSEEINV-AKKTVESSSND-LGPFYSLPSKVRDLYAQFKGI 333

Query:   483 NRI----QSRLCKSALESDENLLLCAPTGAGKTNVALLCMLQEI 522
              ++     + L  ++++  +NL+   PT  GKT VA + MLQE+
Sbjct:   334 EKLYEWQHTCLTLNSVQERKNLIYSLPTSGGKTLVAEILMLQEL 377


>UNIPROTKB|Q8TDG4 [details] [associations]
            symbol:HELQ "Helicase POLQ-like" species:9606 "Homo
            sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00490 EMBL:AF436845 GO:GO:0005524
            GO:GO:0005730 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 eggNOG:COG1204 GO:GO:0008026 EMBL:AK128665
            EMBL:AC096768 EMBL:BC015428 EMBL:BC095473 EMBL:AL512702
            IPI:IPI00152527 IPI:IPI00647582 IPI:IPI00807650 IPI:IPI00889496
            RefSeq:NP_598375.2 UniGene:Hs.480101 ProteinModelPortal:Q8TDG4
            SMR:Q8TDG4 IntAct:Q8TDG4 STRING:Q8TDG4 PhosphoSite:Q8TDG4
            DMDM:296434521 PaxDb:Q8TDG4 PRIDE:Q8TDG4 DNASU:113510
            Ensembl:ENST00000295488 GeneID:113510 KEGG:hsa:113510
            UCSC:uc003hom.3 UCSC:uc003hoo.1 UCSC:uc003hop.1 CTD:113510
            GeneCards:GC04M084328 HGNC:HGNC:18536 HPA:HPA036853 MIM:606769
            neXtProt:NX_Q8TDG4 PharmGKB:PA164720529 InParanoid:Q8TDG4
            OMA:SRPLENC OrthoDB:EOG4THVSJ PhylomeDB:Q8TDG4 GenomeRNAi:113510
            NextBio:78853 ArrayExpress:Q8TDG4 Bgee:Q8TDG4 Genevestigator:Q8TDG4
            Uniprot:Q8TDG4
        Length = 1101

 Score = 170 (64.9 bits), Expect = 3.5e-12, Sum P(2) = 3.5e-12
 Identities = 75/271 (27%), Positives = 128/271 (47%)

Query:   815 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGL 873
             DE+H++ +  RG  LE  +A+ +   + TQ    ++G+SATL N +D+   L+ +  T  
Sbjct:   463 DELHMIGEGSRGATLEMTLAKILYTSKTTQ----IIGMSATLNNVEDLQKFLQAEYYTSQ 518

Query:   874 F-------YF--DNSFRPVALEQQYIGVTEKKALK-----RFQVMN-DIVYEKVMEHAGR 918
             F       Y   +++   V  + +  G+T  + L        + M+ D +   V E    
Sbjct:   519 FRPVELKEYLKINDTIYEVDSKAEN-GMTFSRLLNYKYSDTLKKMDPDHLVALVTEVIPN 577

Query:   919 NQLLVFVHSRKETGKTARAIRDMCLEKDTLGQFLREGSASMEVLRTEADQVKNGELRDLL 978
                LVF  S+K     A  I    L K+ L    +E     EV++     + NG L  +L
Sbjct:   578 YSCLVFCPSKKNCENVAEMICKF-LSKEYLKHKEKE---KCEVIKN-LKNIGNGNLCPVL 632

Query:   979 ----PYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVVDRT-LVE 1033
                 P+G A HH+G+T  +R L+E+ ++   + +   T+TLA GVNLPA  V+ R   V 
Sbjct:   633 KRTIPFGVAYHHSGLTSDERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILRAPYVA 692

Query:  1034 DLFADRH-IQVLVSTATLAWGVNLPAHTVII 1063
               F  R+  + ++  A  A G++    +++I
Sbjct:   693 KEFLKRNQYKQMIGRAGRA-GIDTIGESILI 722

 Score = 130 (50.8 bits), Expect = 4.4e-13, Sum P(3) = 4.4e-13
 Identities = 44/160 (27%), Positives = 78/160 (48%)

Query:  1028 DRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQM 1087
             +R L+E+ ++   + +   T+TLA GVNLPA  VI++   +      R          QM
Sbjct:   651 ERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILRAPYVAKEFLKR------NQYKQM 704

Query:  1088 LGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLP-VESQMISK----LPDMLNAEIVL 1142
             +GRAGR   DT GE +LI    + Q  L L+   L    S ++ +    +  +  + I L
Sbjct:   705 IGRAGRAGIDTIGESILILQEKDKQQVLELITKPLENCYSHLVQEFTKGIQTLFLSLIGL 764

Query:  1143 GTVQNLKDAVTWLGYTYLYIR---MLRAPNLYGISHDALK 1179
                 NL D   ++  T+  ++   +L+  +L+ I+ ++L+
Sbjct:   765 KIATNLDDIYHFMNGTFFGVQQKVLLKEKSLWEITVESLR 804

 Score = 100 (40.3 bits), Expect = 4.4e-13, Sum P(3) = 4.4e-13
 Identities = 25/81 (30%), Positives = 47/81 (58%)

Query:   559 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGL 617
             DE+H++ +  RG  LE  +A+ +   + TQ    ++G+SATL N +D+   L+ +     
Sbjct:   463 DELHMIGEGSRGATLEMTLAKILYTSKTTQ----IIGMSATLNNVEDLQKFLQAE----- 513

Query:   618 FYFDNSFRPVALEQQYIGVTE 638
              Y+ + FRPV L++ Y+ + +
Sbjct:   514 -YYTSQFRPVELKE-YLKIND 532

 Score = 92 (37.4 bits), Expect = 4.4e-13, Sum P(3) = 4.4e-13
 Identities = 32/104 (30%), Positives = 52/104 (50%)

Query:   426 NKRCELPDGSFRKQRKGY---EEVHVPALKPKPMGPDETLVPIDKLPRYVQHAFEDFKTL 482
             N + + P  S  KQ K     EE++V A K      ++ L P   LP  V+  +  FK +
Sbjct:   276 NAKAQTPIFSRSKQLKDTLLSEEINV-AKKTVESSSND-LGPFYSLPSKVRDLYAQFKGI 333

Query:   483 NRI----QSRLCKSALESDENLLLCAPTGAGKTNVALLCMLQEI 522
              ++     + L  ++++  +NL+   PT  GKT VA + MLQE+
Sbjct:   334 EKLYEWQHTCLTLNSVQERKNLIYSLPTSGGKTLVAEILMLQEL 377

 Score = 52 (23.4 bits), Expect = 0.00070, Sum P(2) = 0.00070
 Identities = 11/21 (52%), Positives = 14/21 (66%)

Query:   758 FRLPRGAGKTNVALLCMLQEI 778
             + LP   GKT VA + MLQE+
Sbjct:   357 YSLPTSGGKTLVAEILMLQEL 377


>UNIPROTKB|F1NYH9 [details] [associations]
            symbol:HELQ "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR010995
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005730 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GeneTree:ENSGT00640000091272 SUPFAM:SSF47794 GO:GO:0008026
            OMA:SRPLENC EMBL:AADN02009041 IPI:IPI00596471
            Ensembl:ENSGALT00000018274 Uniprot:F1NYH9
        Length = 995

 Score = 159 (61.0 bits), Expect = 5.4e-10, Sum P(2) = 5.4e-10
 Identities = 70/290 (24%), Positives = 129/290 (44%)

Query:   799 APMRSLVQ-EMVGNFGK---DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSA 853
             A + SL++ + + + G    DE+H++ +  RG VLE  +A+ +       ++  +VG+SA
Sbjct:   350 ALVNSLIETDRIDDLGLVVVDELHMIGEGSRGAVLEMTLAKILY----ASKNTHVVGMSA 405

Query:   854 TLPNYKDVATLLRIKPETGLFYFDNSFRPVALEQQYIGVTEK-------KALKRFQVMN- 905
             TL N  D+   L+ +  T  F        + +      V  K         L  F+  + 
Sbjct:   406 TLNNVGDLQKFLQAEYYTKNFRPVELKEYIKIRDTIYEVDSKAENGFTFSRLLNFKYSSS 465

Query:   906 ------DIVYEKVMEHAGRNQLLVFVHSRKETGKTARAIRDMCLEKDTLGQFLREGSASM 959
                   D +   V E   +   L+F  ++K     A  +    L K+      RE     
Sbjct:   466 LEKADPDHIVALVTEVIPKYSCLIFCPTKKNCENVATMVCKY-LNKEFRAH--RE-KEKQ 521

Query:   960 EVLRTEADQVKNGE----LRDLLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATL 1015
             ++++   D + NG     LR  +P+G A HH+G+T  +R  +E+ ++   + +L  TATL
Sbjct:   522 DLIKNLKD-IGNGSICPVLRQTIPFGVAYHHSGLTNDERKSIEEAYSRGVLCLLACTATL 580

Query:  1016 AWGVNLPAHTVVDRT--LVEDLFADRHIQVLVSTATLAWGVNLPAHTVII 1063
             A GVNLPA  V+ R   +  +       + ++  A  A G++    ++++
Sbjct:   581 AAGVNLPARRVILRAPYVASEFLKKNQYKQMIGRAGRA-GIDNAGESILV 629

 Score = 143 (55.4 bits), Expect = 4.5e-13, Sum P(3) = 4.5e-13
 Identities = 57/196 (29%), Positives = 92/196 (46%)

Query:  1028 DRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQM 1087
             +R  +E+ ++   + +L  TATLA GVNLPA  VI++   + +        L      QM
Sbjct:   558 ERKSIEEAYSRGVLCLLACTATLAAGVNLPARRVILRAPYVASEF------LKKNQYKQM 611

Query:  1088 LGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMISKLPDMLNA-EIVLGTVQ 1146
             +GRAGR   D  GE +L+    +      L+    P+E+   + LP++    + +L ++ 
Sbjct:   612 IGRAGRAGIDNAGESILVVQEKDKHLVRDLITS--PLENCYSNLLPEITKGMQYLLLSLV 669

Query:  1147 NLKDAVTWLGYTYLYIRMLRAPNLYGISHDAL-KEDPLLECHRADLIHTAALHLERSGLI 1205
              LK AVT      +Y  M     L G+    L KE  L E  R +L +     L +  ++
Sbjct:   670 GLKIAVT---QEEVYSFMCHT--LLGVQQQLLLKEKSLSEIVRDELENLIEKGLLKGKIM 724

Query:  1206 KYDRKSGHMQVTELGR 1221
               + KS  + VT LG+
Sbjct:   725 DQNSKST-LTVTLLGK 739

 Score = 96 (38.9 bits), Expect = 4.5e-13, Sum P(3) = 4.5e-13
 Identities = 30/101 (29%), Positives = 56/101 (55%)

Query:   543 APMRSLVQ-EMVGNFGK---DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSA 597
             A + SL++ + + + G    DE+H++ +  RG VLE  +A+ +       ++  +VG+SA
Sbjct:   350 ALVNSLIETDRIDDLGLVVVDELHMIGEGSRGAVLEMTLAKILY----ASKNTHVVGMSA 405

Query:   598 TLPNYKDVATLLRIKPETGLFYFDNSFRPVALEQQYIGVTE 638
             TL N  D+   L+ +      Y+  +FRPV L++ YI + +
Sbjct:   406 TLNNVGDLQKFLQAE------YYTKNFRPVELKE-YIKIRD 439

 Score = 81 (33.6 bits), Expect = 4.5e-13, Sum P(3) = 4.5e-13
 Identities = 33/105 (31%), Positives = 48/105 (45%)

Query:   426 NKRCELPDGSFRKQRKGY---EEVHVPALKPKPMGPDE-TLVPIDKLPRYVQHAFEDFK- 480
             N + + P  S  KQ K     EE+ V     + +G     + P   LP  V+H    F+ 
Sbjct:   183 NAKAQTPKVSKTKQLKEAILSEEISVAR---ETIGSSSFDIGPFYGLPSKVKHLLRQFRG 239

Query:   481 --TLNRIQSR-LCKSALESDENLLLCAPTGAGKTNVALLCMLQEI 522
               TL   Q   L   +L+  +NL+   PT  GKT VA + +LQE+
Sbjct:   240 IETLYEWQHDCLTLKSLQQRKNLIYSLPTSGGKTLVAEILILQEL 284

 Score = 48 (22.0 bits), Expect = 0.00029, Sum P(3) = 0.00029
 Identities = 10/21 (47%), Positives = 14/21 (66%)

Query:   758 FRLPRGAGKTNVALLCMLQEI 778
             + LP   GKT VA + +LQE+
Sbjct:   264 YSLPTSGGKTLVAEILILQEL 284

 Score = 41 (19.5 bits), Expect = 4.9e-09, Sum P(3) = 4.9e-09
 Identities = 15/50 (30%), Positives = 23/50 (46%)

Query:   104 PKTQETRQTYEVLLS----FIQEALGDQPRDI--LCGAADEVLTVLKNDR 147
             PK  +T+Q  E +LS      +E +G    DI    G   +V  +L+  R
Sbjct:   189 PKVSKTKQLKEAILSEEISVARETIGSSSFDIGPFYGLPSKVKHLLRQFR 238


>UNIPROTKB|J9P160 [details] [associations]
            symbol:HELQ "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GeneTree:ENSGT00640000091272
            GO:GO:0008026 CTD:113510 EMBL:AAEX03016730 RefSeq:XP_544959.2
            Ensembl:ENSCAFT00000044378 GeneID:487837 KEGG:cfa:487837
            Uniprot:J9P160
        Length = 1072

 Score = 165 (63.1 bits), Expect = 3.3e-11, Sum P(3) = 3.3e-11
 Identities = 73/271 (26%), Positives = 128/271 (47%)

Query:   815 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGL 873
             DE+H++ +  RG +LE  +A+ +   + TQ    ++G+SATL N +D+   L+ +  T  
Sbjct:   435 DELHMIGEGSRGAILEMTLAKVLYTSKTTQ----IIGMSATLTNVEDLQKFLQAEYYTSQ 490

Query:   874 F-------YF--DNSFRPVALEQQYIGVTEKKALK-----RFQVMN-DIVYEKVMEHAGR 918
             F       Y   +++   V  + +  G+T  + L        + M+ D +     E    
Sbjct:   491 FRPVELKEYLKINDAIYEVDSKAEN-GMTFSRLLNCQYSDTLKKMDPDHLVALATEVIPN 549

Query:   919 NQLLVFVHSRKETGKTARAIRDMCLEKDTLGQFLREGSASMEVLRTEADQVKNGELRDLL 978
             +  LVF  ++K     A  I    L K  L    RE     EV++     + +G L  +L
Sbjct:   550 HSCLVFCPTKKNCENVAEMICRF-LSKQYLKH--RE-KEKHEVIKN-LKNISSGNLCPIL 604

Query:   979 ----PYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVVDRT-LVE 1033
                 P+G A HH+G+T  +R L+E+ ++   + +   T+TLA GVNLPA  V+ R   V 
Sbjct:   605 KRTIPFGVAYHHSGLTSDERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILRAPYVA 664

Query:  1034 DLFADRH-IQVLVSTATLAWGVNLPAHTVII 1063
               F  R+  + ++  A  A G++    +++I
Sbjct:   665 KEFLKRNQYKQMIGRAGRA-GIDSIGESILI 694

 Score = 125 (49.1 bits), Expect = 6.1e-13, Sum P(4) = 6.1e-13
 Identities = 43/160 (26%), Positives = 79/160 (49%)

Query:  1028 DRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQM 1087
             +R L+E+ ++   + +   T+TLA GVNLPA  VI++   +      R          QM
Sbjct:   623 ERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILRAPYVAKEFLKR------NQYKQM 676

Query:  1088 LGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLP-VESQMISK----LPDMLNAEIVL 1142
             +GRAGR   D+ GE +LI    + Q  L L++  L    S ++ +    +  +  + I L
Sbjct:   677 IGRAGRAGIDSIGESILILQEKDKQQVLELISRPLENCYSHLVQEFTKGIQTLFLSLIGL 736

Query:  1143 GTVQNLKDAVTWLGYTYLYIR---MLRAPNLYGISHDALK 1179
                 NL D   ++  T+  ++   +L+  +L+ I+ ++L+
Sbjct:   737 KIATNLDDIYHFMCGTFFGVQQKILLQEKSLWDITIESLR 776

 Score = 105 (42.0 bits), Expect = 6.1e-13, Sum P(4) = 6.1e-13
 Identities = 25/81 (30%), Positives = 48/81 (59%)

Query:   559 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGL 617
             DE+H++ +  RG +LE  +A+ +   + TQ    ++G+SATL N +D+   L+ +     
Sbjct:   435 DELHMIGEGSRGAILEMTLAKVLYTSKTTQ----IIGMSATLTNVEDLQKFLQAE----- 485

Query:   618 FYFDNSFRPVALEQQYIGVTE 638
              Y+ + FRPV L++ Y+ + +
Sbjct:   486 -YYTSQFRPVELKE-YLKIND 504

 Score = 95 (38.5 bits), Expect = 6.1e-13, Sum P(4) = 6.1e-13
 Identities = 34/109 (31%), Positives = 53/109 (48%)

Query:   421 SHFMSNKRCELPDGSFRKQRKGY---EEVHVPALKPKPMGPDETLVPIDKLPRYVQHAFE 477
             S    N + + P  S  KQ K     EE++V A K      D+ L P   LP  V+  + 
Sbjct:   243 SAMTGNAKAQTPVFSRTKQLKETLLSEEINV-AKKAIESSSDD-LGPFYSLPTKVRDLYV 300

Query:   478 DFKTLNRI----QSRLCKSALESDENLLLCAPTGAGKTNVALLCMLQEI 522
              FK + ++     + L  ++++  +NL+   PT  GKT VA + MLQE+
Sbjct:   301 QFKGIEKLYEWQHTCLTLNSVQERKNLIYSLPTSGGKTLVAEILMLQEL 349

 Score = 42 (19.8 bits), Expect = 6.1e-13, Sum P(4) = 6.1e-13
 Identities = 12/54 (22%), Positives = 27/54 (50%)

Query:    45 GKLEGTRMGDRFMRTKPIKAEERKVKRQKRDEAQY-DFTRMKGATLLSEGVDEM 97
             G+L+ T +G R  +T  ++ E    +    +E  + D+      + L++ VD++
Sbjct:    45 GELKETVVGSRREKTVEVEVEVEPAQNNDSEEDMFGDYDSFAENSFLAQ-VDDL 97


>ZFIN|ZDB-GENE-040724-232 [details] [associations]
            symbol:si:rp71-1p14.5 "si:rp71-1p14.5" species:7955
            "Danio rerio" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0006260 "DNA
            replication" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
            activity" evidence=IEA] InterPro:IPR001098 InterPro:IPR001650
            InterPro:IPR002298 InterPro:IPR011545 InterPro:IPR012337
            InterPro:IPR019760 Pfam:PF00270 Pfam:PF00271 Pfam:PF00476
            PRINTS:PR00868 PROSITE:PS00447 PROSITE:PS51194 SMART:SM00482
            SMART:SM00490 ZFIN:ZDB-GENE-040724-232 GO:GO:0005524 GO:GO:0003677
            GO:GO:0006260 SUPFAM:SSF53098 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GeneTree:ENSGT00640000091272 GO:GO:0008026
            InterPro:IPR014014 PROSITE:PS51195 GO:GO:0003887 EMBL:CU928848
            EMBL:CU695000 IPI:IPI00492363 Ensembl:ENSDART00000065556
            Uniprot:F1Q4P4
        Length = 2576

 Score = 185 (70.2 bits), Expect = 1.6e-12, Sum P(3) = 1.6e-12
 Identities = 62/202 (30%), Positives = 100/202 (49%)

Query:  1014 TLAWGVNL--PAHTVVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNP 1071
             T+ WGV       T  +R ++E  F   +I+VL +T+TL+ GVNLPA  VII+ T ++N 
Sbjct:   611 TVPWGVAFHHAGLTFDERDILEGAFRQGYIRVLAATSTLSSGVNLPARRVIIR-TPVFN- 668

Query:  1072 EKGRWVELGALDVLQMLGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQL-PVESQMIS 1130
               G  +++  L   QM+GRAGR   DT GE VL+   +E    +SL+   L P+ S ++ 
Sbjct:   669 --GHLLDI--LTYKQMVGRAGRKGVDTIGESVLVCKEAERAKGMSLIQGSLKPISSCLVK 724

Query:  1131 K-----LPDMLNA--EIVLGTVQNLKDAVTWLGYTYLYIRMLRAPNLY--GISHDALKED 1181
             +        ML A  EI++G V +    V       L    + A  ++  G   +A  + 
Sbjct:   725 REGEGVTTSMLRAILEIIVGGVASSPQDVRMYAACTLLAASIAAEEVHQDGSESEARNKG 784

Query:  1182 PLLECHRADLIHTAALHLERSG 1203
              +  C    L+    +H+++ G
Sbjct:   785 AIEACIEW-LMDNEFIHIQKEG 805

 Score = 149 (57.5 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
 Identities = 82/299 (27%), Positives = 139/299 (46%)

Query:   763 GAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNFGKDEI-HLLH 821
             G    +VA+ C +++    +N    I  D+  ++    +  L   MVG+ G+  +  LL 
Sbjct:   387 GFSALDVAV-CTIEKANGLVNR--LIEEDKLDLLGTVVVDEL--HMVGDSGRGYLLELLL 441

Query:   822 DERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLL-------RIKP----- 869
              +   + +    R   + ++T   V+++G+SATLPN   +A  L         +P     
Sbjct:   442 TKIRYIAQKTATRN--SGQSTSTGVQIIGMSATLPNLDLLARWLSAELYSTNYRPVPLME 499

Query:   870 --ETGLFYFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQLLVFVHS 927
               + G   +D S     L +Q+      K      V   + +E V +  G + LL F  S
Sbjct:   500 WVKIGTNIYDGSLN---LVRQFTPALPIKGDDDHIV--SLCFETVQD--GHSALL-FCPS 551

Query:   928 RKETGKTARAI-RDMC------LEKDTLGQFL---REGSASM--EVLRTEA--DQVKNGE 973
             +    K A +I R+        ++  + GQ +   +EG   +  ++ RT A  D V    
Sbjct:   552 KNWCEKLADSIGREFYNLHHKEMQSGSGGQSISLNQEGLLDVLAQLKRTPAGLDHV---- 607

Query:   974 LRDLLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVVDRTLV 1032
             L+  +P+G A HHAG+T  +R ++E  F   +I+VL +T+TL+ GVNLPA  V+ RT V
Sbjct:   608 LQRTVPWGVAFHHAGLTFDERDILEGAFRQGYIRVLAATSTLSSGVNLPARRVIIRTPV 666

 Score = 84 (34.6 bits), Expect = 1.6e-12, Sum P(3) = 1.6e-12
 Identities = 27/89 (30%), Positives = 47/89 (52%)

Query:   551 EMVGNFGKDEIHLLHDE-RGPVLEALIAR--------TIRNI-EATQEDVRLVGLSATLP 600
             +++G    DE+H++ D  RG +LE L+ +          RN  ++T   V+++G+SATLP
Sbjct:   415 DLLGTVVVDELHMVGDSGRGYLLELLLTKIRYIAQKTATRNSGQSTSTGVQIIGMSATLP 474

Query:   601 NYKDVATLLRIKPETGLFYFDNSFRPVAL 629
             N   +A  L  +       +  ++RPV L
Sbjct:   475 NLDLLARWLSAE------LYSTNYRPVPL 497

 Score = 58 (25.5 bits), Expect = 1.6e-12, Sum P(3) = 1.6e-12
 Identities = 12/25 (48%), Positives = 18/25 (72%)

Query:   498 ENLLLCAPTGAGKTNVALLCMLQEI 522
             +NL+  APT AGKT V+ L +L+ +
Sbjct:   316 QNLVYSAPTSAGKTLVSELLILKRV 340

 Score = 38 (18.4 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
 Identities = 8/21 (38%), Positives = 13/21 (61%)

Query:   758 FRLPRGAGKTNVALLCMLQEI 778
             +  P  AGKT V+ L +L+ +
Sbjct:   320 YSAPTSAGKTLVSELLILKRV 340


>WB|WBGene00020964 [details] [associations]
            symbol:polq-1 species:6239 "Caenorhabditis elegans"
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003887 "DNA-directed
            DNA polymerase activity" evidence=IEA] [GO:0006260 "DNA
            replication" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] InterPro:IPR001098
            InterPro:IPR001650 InterPro:IPR002298 InterPro:IPR011545
            InterPro:IPR019760 Pfam:PF00270 Pfam:PF00271 Pfam:PF00476
            PRINTS:PR00868 PROSITE:PS00447 PROSITE:PS51194 SMART:SM00482
            SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0006260
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1204
            GeneTree:ENSGT00640000091272 GO:GO:0008026 GO:GO:0003887 KO:K02349
            EMBL:FO081687 EMBL:FO081686 RefSeq:NP_498250.3
            ProteinModelPortal:A0FLQ6 PaxDb:A0FLQ6 EnsemblMetazoa:W03A3.2
            GeneID:175810 KEGG:cel:CELE_W03A3.2 UCSC:W03A3.2 CTD:175810
            WormBase:W03A3.2 InParanoid:A0FLQ6 OMA:EASIPEI NextBio:889766
            Uniprot:A0FLQ6
        Length = 1661

 Score = 228 (85.3 bits), Expect = 1.9e-12, Sum P(4) = 1.9e-12
 Identities = 68/233 (29%), Positives = 121/233 (51%)

Query:   807 EMVGNFGKDEIHLLHDE-RGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLL 865
             E +G    DE+H++ D  RG  +E ++++ +   ++  E VR++G+SAT+P    +   L
Sbjct:   141 EEIGMIVVDEMHMVFDSSRGAHIEHMLSKVLLWNQSALEKVRIIGMSATIPELYRIGKWL 200

Query:   866 RIKPETGLFYFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVM----EHAGRN-Q 920
                   G   F+  FRP+ L+   +  +E +     +V+ +   + ++    E   RN Q
Sbjct:   201 -----DGAKVFEARFRPIVLQNHIVIGSELRKSGDNKVLREFSEDPLILLTEESFRRNSQ 255

Query:   921 LLVFVHSRKETGKTARAIRDMCLE----KDTLGQFLREGSASMEVLR--TEADQVKNGEL 974
              LV + S+ +  KTA  I     E      +L + L+E +  +  ++   E +  K+  +
Sbjct:   256 TLVMISSKLDAEKTALNIASRFHEINKTDSSLLEILKERANGLLFIKHGLERNGCKDRNV 315

Query:   975 RDLLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
                L +G A HHAG+T  +R  +E  F +++I +LV+T+TLA GVNLPA  V+
Sbjct:   316 MSTLAWGVAYHHAGLTMEERECIELGFREKNIVILVATSTLASGVNLPAERVL 368

 Score = 162 (62.1 bits), Expect = 3.1e-11, Sum P(5) = 3.1e-11
 Identities = 44/124 (35%), Positives = 72/124 (58%)

Query:  1013 ATLAWGV--NLPAHTVVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYN 1070
             +TLAWGV  +    T+ +R  +E  F +++I +LV+T+TLA GVNLPA  V+IK  Q   
Sbjct:   317 STLAWGVAYHHAGLTMEERECIELGFREKNIVILVATSTLASGVNLPAERVLIKA-QPRG 375

Query:  1071 PEKGRWVELGALDVLQMLGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMIS 1130
             P       L +L+  QM+GRAGR  + T+GE  L+    +    L ++  + P++  +++
Sbjct:   376 PSA-----LTSLNYRQMVGRAGRTGHATRGETYLLIKKCDRDAVLKII--ETPIDQGVLT 428

Query:  1131 KLPD 1134
             +  D
Sbjct:   429 RKRD 432

 Score = 101 (40.6 bits), Expect = 3.1e-11, Sum P(5) = 3.1e-11
 Identities = 24/85 (28%), Positives = 45/85 (52%)

Query:   551 EMVGNFGKDEIHLLHDE-RGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLL 609
             E +G    DE+H++ D  RG  +E ++++ +   ++  E VR++G+SAT+P    +   L
Sbjct:   141 EEIGMIVVDEMHMVFDSSRGAHIEHMLSKVLLWNQSALEKVRIIGMSATIPELYRIGKWL 200

Query:   610 RIKPETGLFYFDNSFRPVALEQQYI 634
                   G   F+  FRP+ L+   +
Sbjct:   201 -----DGAKVFEARFRPIVLQNHIV 220

 Score = 55 (24.4 bits), Expect = 1.9e-12, Sum P(4) = 1.9e-12
 Identities = 16/44 (36%), Positives = 25/44 (56%)

Query:   474 HAFEDFKTLNRIQSRLCKSALE-SDENLLLCAPTGAGKTNVALL 516
             +A ++ K L   Q  +   A +  D++L+  APT AGK+ VA L
Sbjct:    20 YAEQNIKALFDWQIDVLNEARQFEDQHLIFSAPTSAGKSIVAEL 63

 Score = 42 (19.8 bits), Expect = 1.9e-12, Sum P(4) = 1.9e-12
 Identities = 10/30 (33%), Positives = 16/30 (53%)

Query:  1623 SLLSIKRLTLQQKAKIKLDFVAPNPGHHSY 1652
             SL  + R++++   K+   F A  PG  SY
Sbjct:  1507 SLSELTRMSIEDAEKMLKAFFAMFPGVRSY 1536

 Score = 42 (19.8 bits), Expect = 1.9e-12, Sum P(4) = 1.9e-12
 Identities = 15/49 (30%), Positives = 18/49 (36%)

Query:  1175 HDALKEDPLLECHRADLIHTAALHLERSGLIKYDRKSGHMQVTELGRIA 1223
             HD  K   L       L   A   L R+  I  D     +  T+LGR A
Sbjct:   458 HDLCKL-LLFNSENLQLSDIAIEMLLRNSFISQDENDDQLSPTQLGRAA 505


>ZFIN|ZDB-GENE-060503-421 [details] [associations]
            symbol:helq "helicase, POLQ-like" species:7955
            "Danio rerio" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR010995 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
            ZFIN:ZDB-GENE-060503-421 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GeneTree:ENSGT00640000091272 SUPFAM:SSF47794 GO:GO:0008026
            EMBL:BX649525 CTD:113510 IPI:IPI00799443 RefSeq:XP_691411.3
            UniGene:Dr.86132 Ensembl:ENSDART00000109412 GeneID:562952
            KEGG:dre:562952 NextBio:20884669 Uniprot:F1Q4P2
        Length = 1010

 Score = 204 (76.9 bits), Expect = 4.7e-12, Sum P(2) = 4.7e-12
 Identities = 78/294 (26%), Positives = 137/294 (46%)

Query:   801 MRSLVQ-EMVGNFGK---DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATL 855
             + SL++ + + N G    DE+H+L D  RG +LE  +++ +   ++TQ    ++G+SATL
Sbjct:   366 VNSLIENDRLDNIGLVVVDELHMLGDGSRGAILEMTLSKILYMSKSTQ----VIGMSATL 421

Query:   856 PNYKDVATLLRIKPETGLFYFDNSFRPVALEQQYIGVTEKK-ALKRFQVMNDIVYEKVME 914
              N KD+ + LR +  T  F        V ++     V  K+ A   F  + +  Y   M+
Sbjct:   422 GNVKDLQSFLRAENYTNNFRPVELKEYVKIKDSIYEVDPKEEACFTFSRLLNFKYSSGMQ 481

Query:   915 HAGRNQLLVF---VHSRKE------TGKTARAIRDMCLEKDTLGQFLREGSASMEVLRTE 965
                 + ++     V  ++       T K    +  M   K    +F++   A   +L  E
Sbjct:   482 KMDPDHIIALATEVIPQQSCLIFCATKKNCENLAGMIC-KYLNKEFIKHKEAEKAILLGE 540

Query:   966 ADQVKNGELRDLL----PYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNL 1021
                  NG L  +L    P+G A HH+G+T  +R LVE+ ++   + +L  T+TLA G+NL
Sbjct:   541 LKSSGNGSLCPVLQKTIPFGLAYHHSGLTSDERKLVEEAYSSGVLCLLTCTSTLAAGINL 600

Query:  1022 PAHTVVDRT--LVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEK 1073
             PA  V+ R+  +  D       + +V  A  A G++    +++I   +  N  K
Sbjct:   601 PARRVILRSPYVAADFLKRSQYKQMVGRAGRA-GIDAMGESILILQDKDINTAK 653

 Score = 116 (45.9 bits), Expect = 1.6e-09, Sum P(3) = 1.6e-09
 Identities = 55/193 (28%), Positives = 90/193 (46%)

Query:  1028 DRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQM 1087
             +R LVE+ ++   + +L  T+TLA G+NLPA  VI++   +      R          QM
Sbjct:   572 ERKLVEEAYSSGVLCLLTCTSTLAAGINLPARRVILRSPYVAADFLKR------SQYKQM 625

Query:  1088 LGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMISKLPD----MLNAEI-VL 1142
             +GRAGR   D  GE +LI    ++     LL    P+E    + L D    +L+  + ++
Sbjct:   626 VGRAGRAGIDAMGESILILQDKDINTAKKLLC--APMEKCYSNLLHDGGRGLLSLILSLI 683

Query:  1143 G-----TVQNLKDAV--TWLGYTYLYIRMLRAP-NLYGISHDALKEDPLLECHRADLIHT 1194
             G     TV+ +KD +  T+LG     +   ++  +L   S   LK+  L+E   +D  + 
Sbjct:   684 GLKITTTVEQVKDLMKGTFLGVQEAQVSPEKSLWDLTVESIQTLKQKNLIEVS-SDENNQ 742

Query:  1195 AALHLERSGLIKY 1207
               L + R G   Y
Sbjct:   743 NILQITRLGRATY 755

 Score = 115 (45.5 bits), Expect = 1.6e-09, Sum P(3) = 1.6e-09
 Identities = 33/99 (33%), Positives = 59/99 (59%)

Query:   545 MRSLVQ-EMVGNFGK---DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATL 599
             + SL++ + + N G    DE+H+L D  RG +LE  +++ +   ++TQ    ++G+SATL
Sbjct:   366 VNSLIENDRLDNIGLVVVDELHMLGDGSRGAILEMTLSKILYMSKSTQ----VIGMSATL 421

Query:   600 PNYKDVATLLRIKPETGLFYFDNSFRPVALEQQYIGVTE 638
              N KD+ + LR +  T      N+FRPV L++ Y+ + +
Sbjct:   422 GNVKDLQSFLRAENYT------NNFRPVELKE-YVKIKD 453

 Score = 55 (24.4 bits), Expect = 4.7e-12, Sum P(2) = 4.7e-12
 Identities = 18/65 (27%), Positives = 30/65 (46%)

Query:   462 LVPIDKLPRYVQHAFEDFKTLNRIQS--RLCKS--ALESDENLLLCAPTGAGKTNVALLC 517
             L P   LP  V+      K +  +    + C S  +++   NL+   PT  GKT VA + 
Sbjct:   234 LGPFFGLPSKVKDLIFRLKGIQDLYEWQKTCLSLDSIQQRRNLIYSLPTSGGKTLVAEIL 293

Query:   518 MLQEI 522
             + +E+
Sbjct:   294 IFKEL 298

 Score = 40 (19.1 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
 Identities = 8/21 (38%), Positives = 13/21 (61%)

Query:   758 FRLPRGAGKTNVALLCMLQEI 778
             + LP   GKT VA + + +E+
Sbjct:   278 YSLPTSGGKTLVAEILIFKEL 298


>UNIPROTKB|Q10701 [details] [associations]
            symbol:helY "Probable helicase HelY" species:1773
            "Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
            [GO:0005829 "cytosol" evidence=IDA] [GO:0005886 "plasma membrane"
            evidence=IDA] InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR012961 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005829 GO:GO:0005886
            GO:GO:0005524 GO:GO:0005618 EMBL:AE000516 GenomeReviews:AE000516_GR
            GenomeReviews:AL123456_GR EMBL:BX842578 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG4581 PIR:G70767 RefSeq:NP_216608.1 RefSeq:NP_336620.1
            RefSeq:YP_006515507.1 ProteinModelPortal:Q10701 SMR:Q10701
            PRIDE:Q10701 EnsemblBacteria:EBMYCT00000003887
            EnsemblBacteria:EBMYCT00000069683 GeneID:13316898 GeneID:887736
            GeneID:924573 KEGG:mtc:MT2153 KEGG:mtu:Rv2092c KEGG:mtv:RVBD_2092c
            PATRIC:18126496 TubercuList:Rv2092c HOGENOM:HOG000245391 KO:K03727
            OMA:ANESAWQ ProtClustDB:CLSK791623 Uniprot:Q10701
        Length = 906

 Score = 124 (48.7 bits), Expect = 6.1e-12, Sum P(3) = 6.1e-12
 Identities = 34/97 (35%), Positives = 51/97 (52%)

Query:   973 ELRDLLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVVDRTLV 1032
             E R+ L  G A HHAGM    R  VE+LF    ++ + +T TLA G+N+PA TVV   LV
Sbjct:   331 EWREGLLRGLAAHHAGMLPAFRHTVEELFTAGLVKAVFATETLALGINMPARTVVLERLV 390

Query:  1033 EDLFADRHIQVLVSTATLAWG------VNLPAHTVII 1063
             +    ++H+ +     T   G      +++  H V+I
Sbjct:   391 K-FNGEQHMPLTPGEYTQLTGRAGRRGIDVEGHAVVI 426

 Score = 123 (48.4 bits), Expect = 7.8e-12, Sum P(3) = 7.8e-12
 Identities = 30/84 (35%), Positives = 49/84 (58%)

Query:  1029 RTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQML 1088
             R  VE+LF    ++ + +T TLA G+N+PA TV+++    +N E+   +  G  +  Q+ 
Sbjct:   352 RHTVEELFTAGLVKAVFATETLALGINMPARTVVLERLVKFNGEQHMPLTPG--EYTQLT 409

Query:  1089 GRAGRPQYDTKGEGVLITNHSELQ 1112
             GRAGR   D +G  V+I  H E++
Sbjct:   410 GRAGRRGIDVEGHAVVIW-HPEIE 432

 Score = 104 (41.7 bits), Expect = 6.1e-12, Sum P(3) = 6.1e-12
 Identities = 40/126 (31%), Positives = 60/126 (47%)

Query:   481 TLNRIQSRLCKSALESDENLLLCAPTGAGKTNVALLCMLQEIGKHIN-ADGTINADEFKI 539
             +L+  Q R C SALE    +L+CAPTGAGKT V       E   H+  A G+      K 
Sbjct:    17 SLDDFQQRAC-SALERGHGVLVCAPTGAGKTVVG------EFAVHLALAAGS------KC 63

Query:   540 IYVAPMRSLVQE----MVGNFGKDEIHLLHDE-----RGPVLEALIARTIRNIEATQEDV 590
              Y  P+++L  +    +   +G+D+I LL  +       PV+  +    +RN+    +  
Sbjct:    64 FYTTPLKALSNQKHTDLTARYGRDQIGLLTGDLSVNGNAPVV-VMTTEVLRNM-LYADSP 121

Query:   591 RLVGLS 596
              L GLS
Sbjct:   122 ALQGLS 127

 Score = 80 (33.2 bits), Expect = 6.1e-12, Sum P(3) = 6.1e-12
 Identities = 26/78 (33%), Positives = 43/78 (55%)

Query:   815 DEIHLLHDE-RGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLR-IKPETG 872
             DE+H L D  RGPV E +I +         +DVR+V LSAT+ N ++    ++ ++ +T 
Sbjct:   132 DEVHFLADRMRGPVWEEVILQL-------PDDVRVVSLSATVSNAEEFGGWIQTVRGDTT 184

Query:   873 LFYFDNSFRPVALEQQYI 890
             +   ++  RPV L Q  +
Sbjct:   185 VVVDEH--RPVPLWQHVL 200

 Score = 80 (33.2 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
 Identities = 26/78 (33%), Positives = 43/78 (55%)

Query:   559 DEIHLLHDE-RGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLR-IKPETG 616
             DE+H L D  RGPV E +I +         +DVR+V LSAT+ N ++    ++ ++ +T 
Sbjct:   132 DEVHFLADRMRGPVWEEVILQL-------PDDVRVVSLSATVSNAEEFGGWIQTVRGDTT 184

Query:   617 LFYFDNSFRPVALEQQYI 634
             +   ++  RPV L Q  +
Sbjct:   185 VVVDEH--RPVPLWQHVL 200


>GENEDB_PFALCIPARUM|PF13_0102 [details] [associations]
            symbol:PF13_0102 "DNAJ-like Sec63 homologue"
            species:5833 "Plasmodium falciparum" [GO:0030176 "integral to
            endoplasmic reticulum membrane" evidence=ISS] [GO:0005784 "Sec61
            translocon complex" evidence=ISS] [GO:0045047 "protein targeting to
            ER" evidence=ISS] InterPro:IPR027137 InterPro:IPR001623
            InterPro:IPR018253 Pfam:PF00226 GO:GO:0006457 GO:GO:0030176
            Gene3D:1.10.287.110 PRINTS:PR00625 SMART:SM00271 SUPFAM:SSF46565
            PROSITE:PS00636 PROSITE:PS50076 GO:GO:0005784 InterPro:IPR004179
            Pfam:PF02889 SMART:SM00973 EMBL:AL844509 HSSP:P08622 GO:GO:0045047
            KO:K09540 PANTHER:PTHR24075 RefSeq:XP_001349924.1
            ProteinModelPortal:Q8IEC8 IntAct:Q8IEC8 MINT:MINT-1606227
            PRIDE:Q8IEC8 EnsemblProtists:PF13_0102:mRNA GeneID:814078
            KEGG:pfa:PF13_0102 EuPathDB:PlasmoDB:PF3D7_1318800
            HOGENOM:HOG000280883 OMA:RIWERIG ProtClustDB:CLSZ2429140
            Uniprot:Q8IEC8
        Length = 651

 Score = 210 (79.0 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
 Identities = 53/218 (24%), Positives = 103/218 (47%)

Query:  1460 VEDVDSEAIRLIQACVDVLSSNGWLSPAVAAMEVAQMITQAMWSKDSYLKQLPHFNADII 1519
             +E +   ++ +  + +++     W   A +A+   + + QA  +K+S L Q+PHF+ +I+
Sbjct:   342 LEHILKFSLLITHSMIEISILRDWFLTAQSALTFRRCLIQAFEAKNSSLLQIPHFDENIV 401

Query:  1520 KRCTEKG---VETVFDIMXXXXXXXXXXXXXXXXXXADVARFCNRYPNIELSYEVLNKDR 1576
             +    KG   V+ V D +                   DV  FCN  P+I+++  ++ +D 
Sbjct:   402 RH-VHKGKFSVKEVLDFVHQDHENRKGLVDMNPDQILDVKSFCNTIPDIKMTAHIVVEDE 460

Query:  1577 --IXXXXXXXXXXXLDR----EDEVTGPVIAPFYPQKREEGWWVVIGDPKTNSLLSIKRL 1630
               I           +DR    E+E  G + AP++PQ + E WW++      + +L    +
Sbjct:   461 THIVKGDVASVYVQIDRSNLKENEAAGYIHAPYFPQPKFEEWWIIATYKNDDRILKYVHV 520

Query:  1631 TLQQKA-KIKLDFVAPNPGHHSYALYFMSDAYLGCDQE 1667
                +K  + KL F+    G+ S +++ + D+Y GCDQ+
Sbjct:   521 KNCEKIIEEKLQFLVDKVGNLSVSVFALCDSYFGCDQK 558

 Score = 40 (19.1 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
 Identities = 12/42 (28%), Positives = 23/42 (54%)

Query:   642 LKRFQVMNDIVYE---KVMEHAGRNQLLVSTLRVELTISPDF 680
             L   Q  +D++ E   K +EH  +  LL++   +E++I  D+
Sbjct:   324 LAHMQRRHDLLSEDLKKDLEHILKFSLLITHSMIEISILRDW 365


>UNIPROTKB|Q8IEC8 [details] [associations]
            symbol:PF13_0102 "DnaJ/SEC63 protein, putative"
            species:36329 "Plasmodium falciparum 3D7" [GO:0005784 "Sec61
            translocon complex" evidence=ISS] [GO:0030176 "integral to
            endoplasmic reticulum membrane" evidence=ISS] [GO:0045047 "protein
            targeting to ER" evidence=ISS] InterPro:IPR027137
            InterPro:IPR001623 InterPro:IPR018253 Pfam:PF00226 GO:GO:0006457
            GO:GO:0030176 Gene3D:1.10.287.110 PRINTS:PR00625 SMART:SM00271
            SUPFAM:SSF46565 PROSITE:PS00636 PROSITE:PS50076 GO:GO:0005784
            InterPro:IPR004179 Pfam:PF02889 SMART:SM00973 EMBL:AL844509
            HSSP:P08622 GO:GO:0045047 KO:K09540 PANTHER:PTHR24075
            RefSeq:XP_001349924.1 ProteinModelPortal:Q8IEC8 IntAct:Q8IEC8
            MINT:MINT-1606227 PRIDE:Q8IEC8 EnsemblProtists:PF13_0102:mRNA
            GeneID:814078 KEGG:pfa:PF13_0102 EuPathDB:PlasmoDB:PF3D7_1318800
            HOGENOM:HOG000280883 OMA:RIWERIG ProtClustDB:CLSZ2429140
            Uniprot:Q8IEC8
        Length = 651

 Score = 210 (79.0 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
 Identities = 53/218 (24%), Positives = 103/218 (47%)

Query:  1460 VEDVDSEAIRLIQACVDVLSSNGWLSPAVAAMEVAQMITQAMWSKDSYLKQLPHFNADII 1519
             +E +   ++ +  + +++     W   A +A+   + + QA  +K+S L Q+PHF+ +I+
Sbjct:   342 LEHILKFSLLITHSMIEISILRDWFLTAQSALTFRRCLIQAFEAKNSSLLQIPHFDENIV 401

Query:  1520 KRCTEKG---VETVFDIMXXXXXXXXXXXXXXXXXXADVARFCNRYPNIELSYEVLNKDR 1576
             +    KG   V+ V D +                   DV  FCN  P+I+++  ++ +D 
Sbjct:   402 RH-VHKGKFSVKEVLDFVHQDHENRKGLVDMNPDQILDVKSFCNTIPDIKMTAHIVVEDE 460

Query:  1577 --IXXXXXXXXXXXLDR----EDEVTGPVIAPFYPQKREEGWWVVIGDPKTNSLLSIKRL 1630
               I           +DR    E+E  G + AP++PQ + E WW++      + +L    +
Sbjct:   461 THIVKGDVASVYVQIDRSNLKENEAAGYIHAPYFPQPKFEEWWIIATYKNDDRILKYVHV 520

Query:  1631 TLQQKA-KIKLDFVAPNPGHHSYALYFMSDAYLGCDQE 1667
                +K  + KL F+    G+ S +++ + D+Y GCDQ+
Sbjct:   521 KNCEKIIEEKLQFLVDKVGNLSVSVFALCDSYFGCDQK 558

 Score = 40 (19.1 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
 Identities = 12/42 (28%), Positives = 23/42 (54%)

Query:   642 LKRFQVMNDIVYE---KVMEHAGRNQLLVSTLRVELTISPDF 680
             L   Q  +D++ E   K +EH  +  LL++   +E++I  D+
Sbjct:   324 LAHMQRRHDLLSEDLKKDLEHILKFSLLITHSMIEISILRDW 365


>FB|FBgn0002905 [details] [associations]
            symbol:mus308 "mutagen-sensitive 308" species:7227
            "Drosophila melanogaster" [GO:0004386 "helicase activity"
            evidence=ISS] [GO:0003887 "DNA-directed DNA polymerase activity"
            evidence=ISS;NAS] [GO:0006281 "DNA repair" evidence=NAS;TAS]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
            [GO:0006289 "nucleotide-excision repair" evidence=IMP] [GO:0006303
            "double-strand break repair via nonhomologous end joining"
            evidence=IMP] InterPro:IPR001098 InterPro:IPR001650
            InterPro:IPR002298 InterPro:IPR003583 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 Pfam:PF00476 PRINTS:PR00868
            PROSITE:PS51194 SMART:SM00278 SMART:SM00482 SMART:SM00490
            EMBL:AE014297 GO:GO:0005524 GO:GO:0003677 GO:GO:0006260
            GO:GO:0006200 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 eggNOG:COG1204 GeneTree:ENSGT00640000091272
            GO:GO:0006303 GO:GO:0006289 GO:GO:0008026 GO:GO:0003887 KO:K02349
            OMA:EASIPEI EMBL:L76559 EMBL:BT044169 PIR:T13858 RefSeq:NP_524333.1
            UniGene:Dm.23677 HSSP:P00582 SMR:O18475 STRING:O18475
            EnsemblMetazoa:FBtr0082662 GeneID:41571 KEGG:dme:Dmel_CG6019
            UCSC:CG6019-RA CTD:41571 FlyBase:FBgn0002905 InParanoid:O18475
            OrthoDB:EOG4FJ6QM GenomeRNAi:41571 NextBio:824448 Uniprot:O18475
        Length = 2059

 Score = 207 (77.9 bits), Expect = 1.9e-11, Sum P(3) = 1.9e-11
 Identities = 96/352 (27%), Positives = 166/352 (47%)

Query:   807 EMVGNFGKDEIHLLHDE-RGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLL 865
             E +G    DE+HL+ D+ RG +LE L+A+ +         ++++ +SATL N +    LL
Sbjct:   349 ETIGMVVVDEVHLISDKGRGYILELLLAKILYMSRRNGLQIQVITMSATLENVQ----LL 404

Query:   866 RIKPETGLFYFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQLLVFV 925
             +   +  L Y  N +RPVAL++  I V       R +++ D+  +KV+     N      
Sbjct:   405 QSWLDAEL-YITN-YRPVALKEM-IKVGTVIYDHRLKLVRDVAKQKVLLKGLENDSDDVA 461

Query:   926 HSRKETGKTARAIRDMCLEKDTLGQFLREGSASMEVLRTEADQVKNGELR-DLLPYGFAI 984
                 ET     ++   C  KD       + + ++ V + +++ V    LR +L P   A 
Sbjct:   462 LLCIETLLEGCSVIVFCPSKDWCENLAVQLATAIHV-QIKSETVLGQRLRTNLNPRAIA- 519

Query:   985 HHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVVDRTLVEDLFADRHIQVL 1044
                    V + L  D+       V+    T A   +    T  +R ++E  F    ++VL
Sbjct:   520 ------EVKQQL-RDIPTGLD-GVMSKAITYACAFHHAGLTTEERDIIEASFKAGALKVL 571

Query:  1045 VSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQMLGRAGRPQYDTKGEGVL 1104
             V+T+TL+ GVNLPA  V+I+ + ++    G+  ++ +L   QM+GRAGR   DT GE +L
Sbjct:   572 VATSTLSSGVNLPARRVLIR-SPLFG---GK--QMSSLTYRQMIGRAGRMGKDTLGESIL 625

Query:  1105 ITNHSELQYYLSLLNHQL-PVESQM-ISKLPDMLNA--EIVLGTVQNLKDAV 1152
             I N    +    L+  +L P+ S + +     +  A  E++   V N K+ +
Sbjct:   626 ICNEINARMGRDLVVSELQPITSCLDMDGSTHLKRALLEVISSGVANTKEDI 677

 Score = 57 (25.1 bits), Expect = 1.9e-11, Sum P(3) = 1.9e-11
 Identities = 12/24 (50%), Positives = 17/24 (70%)

Query:   499 NLLLCAPTGAGKTNVALLCMLQEI 522
             NL+  APT AGKT V+ + ML+ +
Sbjct:   251 NLVYSAPTSAGKTLVSEILMLKTV 274

 Score = 49 (22.3 bits), Expect = 1.9e-11, Sum P(3) = 1.9e-11
 Identities = 10/24 (41%), Positives = 15/24 (62%)

Query:  1182 PLLECHRADLIHTAALHLERSGLI 1205
             PL+EC +AD IH  ++    +G I
Sbjct:  1758 PLMECCQADRIHGQSITYTATGRI 1781

 Score = 42 (19.8 bits), Expect = 9.6e-11, Sum P(3) = 9.6e-11
 Identities = 16/51 (31%), Positives = 27/51 (52%)

Query:  1475 VDVLSSNGWLSPAVAAMEVAQMITQAMWSKDSYLKQLP-HFNADIIKRCTE 1524
             +D+ S N   S  V++ME++ M      S ++ L + P H NA  I  C++
Sbjct:  1359 IDLESKNE--SNGVSSMEISDM------SMENPLMKNPLHLNASHIMSCSK 1401

 Score = 39 (18.8 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
 Identities = 8/21 (38%), Positives = 13/21 (61%)

Query:   758 FRLPRGAGKTNVALLCMLQEI 778
             +  P  AGKT V+ + ML+ +
Sbjct:   254 YSAPTSAGKTLVSEILMLKTV 274


>DICTYBASE|DDB_G0279107 [details] [associations]
            symbol:DDB_G0279107 "Helicase POLQ-like"
            species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR010995
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 dictyBase:DDB_G0279107 GO:GO:0005524 GO:GO:0003676
            EMBL:AAFI02000027 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            eggNOG:COG1204 SUPFAM:SSF47794 GO:GO:0008026 RefSeq:XP_641869.1
            ProteinModelPortal:Q54X98 EnsemblProtists:DDB0205039 GeneID:8621875
            KEGG:ddi:DDB_G0279107 InParanoid:Q54X98 OMA:LTNDERE
            ProtClustDB:CLSZ2430718 Uniprot:Q54X98
        Length = 1238

 Score = 190 (71.9 bits), Expect = 5.8e-11, Sum P(2) = 5.8e-11
 Identities = 70/283 (24%), Positives = 140/283 (49%)

Query:   815 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGL 873
             DEIH++ D ERG +LE LI++ +     ++  ++++G+SAT+PN  ++    R     G 
Sbjct:   578 DEIHMIGDGERGQLLEVLISKLLY---MSKGQIQIIGMSATIPNIDNLQKWFR-----GG 629

Query:   874 FYFDNSFRPVALEQQYIGVTEK---------KALKRFQVMNDIVYEKVMEHAGRNQLLVF 924
              Y   +FRPV L + YI + +K         K+L+  +   +   +  +E   ++ +L+F
Sbjct:   630 VY-QGTFRPVPLTE-YIKIGDKLYDKENNLVKSLQGTEANENHTLQLCLEVVPKHSVLIF 687

Query:   925 VHSRKETGKTARAIRDMCLEKDTLGQFLREGSASMEVLRTEADQVKNGELRDLLPYGFAI 984
               S+  T   A  +      +  L     E    ++++ +        + + ++  G A 
Sbjct:   688 CASKLLTVSLALQLAKS-FPQAILDNRRDEREILIQLIESSNGCKVEEDFKRMIMAGVAY 746

Query:   985 HHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVVDRT--LVEDLFADRHIQ 1042
             H+A +T  +R ++E  F +R + VL +T+TL+ GVNLPA  V+ R+  +  ++   R  +
Sbjct:   747 HNADLTNDEREVIERGFKERSLLVLCATSTLSTGVNLPARRVILRSPRMGRNVLDIRSYR 806

Query:  1043 VLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVL 1085
              +V  A  A G++    ++++     + P+K + +    +D L
Sbjct:   807 QMVGRAGRA-GIDEFGESILM--CDHFAPDKAKKLLTSPMDPL 846

 Score = 139 (54.0 bits), Expect = 2.0e-11, Sum P(3) = 2.0e-11
 Identities = 43/142 (30%), Positives = 70/142 (49%)

Query:  1028 DRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQM 1087
             +R ++E  F +R + VL +T+TL+ GVNLPA  VI++     +P  GR V L      QM
Sbjct:   755 EREVIERGFKERSLLVLCATSTLSTGVNLPARRVILR-----SPRMGRNV-LDIRSYRQM 808

Query:  1088 LGRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQL-PVESQM---ISKLPDMLNAEIVLG 1143
             +GRAGR   D  GE +L+ +H        LL   + P+ S +   +     ++   I  G
Sbjct:   809 VGRAGRAGIDEFGESILMCDHFAPDKAKKLLTSPMDPLLSSINKNVESFQKIILDSICSG 868

Query:  1144 TVQNLKDAVTWLGYTYLYIRML 1165
                +    +++  YT+    +L
Sbjct:   869 IASDKFSILSFFSYTFYSTHLL 890

 Score = 107 (42.7 bits), Expect = 2.0e-11, Sum P(3) = 2.0e-11
 Identities = 37/115 (32%), Positives = 59/115 (51%)

Query:   559 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGL 617
             DEIH++ D ERG +LE LI++ +     ++  ++++G+SAT+PN  ++    R     G 
Sbjct:   578 DEIHMIGDGERGQLLEVLISKLLY---MSKGQIQIIGMSATIPNIDNLQKWFR-----GG 629

Query:   618 FYFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQLLVSTLRV 672
              Y   +FRPV L + YI + +K   K     N++V       A  N  L   L V
Sbjct:   630 VY-QGTFRPVPLTE-YIKIGDKLYDKE----NNLVKSLQGTEANENHTLQLCLEV 678

 Score = 61 (26.5 bits), Expect = 2.0e-11, Sum P(3) = 2.0e-11
 Identities = 28/92 (30%), Positives = 42/92 (45%)

Query:   437 RKQRKGYE-EVHVPALKPKPMGPD--ETLVPIDKLPRYVQHAFE--DFKTLNRIQSR-LC 490
             +KQ++  + E  +    PK +  D  E  V I  LP+ V   ++    K L   Q   L 
Sbjct:   404 QKQKEQQKIEYKIICDNPKLISNDIEECCVKIFGLPKSVGTIYKRRGMKQLYDWQKECLS 463

Query:   491 KSALESDENLLLCAPTGAGKTNVALLCMLQEI 522
              S L   ENL+   PT  GKT VA + + + +
Sbjct:   464 DSNLLLGENLIYSLPTSGGKTLVAEIILFRNL 495


>UNIPROTKB|F1NMU1 [details] [associations]
            symbol:POLQ "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0003887 "DNA-directed
            DNA polymerase activity" evidence=IEA] [GO:0006281 "DNA repair"
            evidence=IEA] [GO:0043142 "single-stranded DNA-dependent ATPase
            activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0006281 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GeneTree:ENSGT00640000091272
            GO:GO:0008026 GO:GO:0003887 GO:GO:0043142 EMBL:AADN02037908
            IPI:IPI00584654 Ensembl:ENSGALT00000024072 Uniprot:F1NMU1
        Length = 904

 Score = 180 (68.4 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
 Identities = 122/469 (26%), Positives = 198/469 (42%)

Query:   815 DEIHLLHDE-RGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYK--DVATLLRIKPET 871
             DE+H+L D  RG +LE L+ + +R I  T++  +      + P +    V  +    P  
Sbjct:   181 DELHMLGDSHRGYLLELLLTK-VRYI--TEKAAKRKTKMKS-PGFGGIQVVGMSATLPNL 236

Query:   872 GLF--YFD-----NSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQLLVF 924
             GL   + D       FRPV L++ ++ +          ++ +  ++  ++  G    +V 
Sbjct:   237 GLLASWLDAELYCTDFRPVPLKE-WVKIGNNIYDSSMNLVRE--FQPKLQLKGDEDHVVS 293

Query:   925 VHSRKETGKTARAIRDMCLEK---DTLGQFLREGSASMEVLRTEADQVKNGELRDLLPYG 981
             +    ET     ++   C  K   + L   +     S++  + E    KN  L  ++   
Sbjct:   294 LCY--ETVCDGHSVLLFCPSKNWCEKLADIIAREFYSLQ--QAEKGSAKNSSLSPVV--- 346

Query:   982 FAIHHAGMTRVDRTLVEDLFA-DRHIQVLVSTATLAWGVNL--PAHTVVDRTLVEDLFAD 1038
               +   G+  V   L   L   D  +Q      TL WGV       T  +R ++E  F  
Sbjct:   347 --VDREGIDEVLDQLRRSLSGLDSVLQ-----RTLPWGVAFHHAGLTFDERDIIEGAFRQ 399

Query:  1039 RHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQMLGRAGRPQYDT 1098
               I+VL +T+TL+ GVNLPA  VII+ T ++    G  +++  L   QM GRAGR   DT
Sbjct:   400 STIRVLAATSTLSSGVNLPARRVIIR-TPMFG---GTLLDV--LTYKQMAGRAGRKGVDT 453

Query:  1099 KGEGVLITNHSELQYYLSLLNHQL-PVESQMISK-----LPDMLNA--EIVLGTVQNLKD 1150
             +GE +L+   SE     +LL   L PV S ++ K        M  A  EI++  V N  D
Sbjct:   454 EGESILVCKPSERSKGTALLQGSLKPVRSCLLRKEGEGVASSMKRAILEIIVSGVANTPD 513

Query:  1151 AV-TWLGYTYLYIRMLRAPNLYGISHDALKEDPLLECHRADLIHTAALH-LERSGLIKYD 1208
              V T+   T L   +           D ++  P+  C  A L+    +  LER+     D
Sbjct:   514 DVQTYASCTLLASSLKDNKRENEKEQDKVQTGPIEACI-AWLLENEFIQVLERAD----D 568

Query:  1209 RKSGHMQVTELGRIA-SHYYCTHETMATYNQL---LKPTLSEIELFRVF 1253
             +K+     T LG    S      E M  ++ L   +K  + E +L  V+
Sbjct:   569 KKAKIFHPTHLGSATLSSSLSPTEAMEIFSDLQRAMKSFVLENDLHIVY 617

 Score = 63 (27.2 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
 Identities = 28/93 (30%), Positives = 44/93 (47%)

Query:   435 SFRKQRKGY-EEVHVPALKPKPMGPDETLVPIDKLPRYVQHAFEDFKTLNRIQSRL-CK- 491
             S R   KG  ++V+VP  +      D+ L+    LP+ V   +     +   + +  C  
Sbjct:    12 SLRCSAKGQCQQVNVPEDQA-----DKLLLASWGLPKAVLEKYHSLGVVQMFEWQAECLM 66

Query:   492 --SALESDENLLLCAPTGAGKTNVALLCMLQEI 522
                 LE  +NL+  APT AGKT VA L +L+ +
Sbjct:    67 LGQVLEG-KNLVYSAPTSAGKTLVAELLILKRV 98

 Score = 41 (19.5 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
 Identities = 9/21 (42%), Positives = 13/21 (61%)

Query:   758 FRLPRGAGKTNVALLCMLQEI 778
             +  P  AGKT VA L +L+ +
Sbjct:    78 YSAPTSAGKTLVAELLILKRV 98


>TAIR|locus:2125677 [details] [associations]
            symbol:AT4G32700 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase
            activity" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISM] [GO:0006260 "DNA replication"
            evidence=IEA;IGI] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0006310 "DNA recombination" evidence=IGI]
            [GO:0009640 "photomorphogenesis" evidence=IMP] [GO:0010468
            "regulation of gene expression" evidence=IGI] InterPro:IPR001098
            InterPro:IPR001650 InterPro:IPR002298 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 Pfam:PF00476 PRINTS:PR00868
            PROSITE:PS51194 SMART:SM00482 SMART:SM00490 GO:GO:0005524
            EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0006260
            GO:GO:0009640 GO:GO:0006310 GO:GO:0010468 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0003887 KO:K02349
            OMA:EASIPEI EMBL:AB192295 IPI:IPI00570534 RefSeq:NP_001078482.1
            UniGene:At.48069 ProteinModelPortal:Q588V7 SMR:Q588V7 STRING:Q588V7
            PRIDE:Q588V7 EnsemblPlants:AT4G32700.2 GeneID:829406
            KEGG:ath:AT4G32700 TAIR:At4g32700 HOGENOM:HOG000030860
            PhylomeDB:Q588V7 ProtClustDB:CLSN2698843 Genevestigator:Q588V7
            Uniprot:Q588V7
        Length = 2154

 Score = 193 (73.0 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
 Identities = 114/421 (27%), Positives = 180/421 (42%)

Query:   774 MLQEIGKHINA------DGTINAD-EFKIIYVAPMRSLVQEMV--GNFGK------DEIH 818
             +L+ +GKH+ +       GT+  D    +  +    SL+  ++  G   +      DE+H
Sbjct:   583 LLEPLGKHVRSYYGNQGGGTLPKDTSVAVCTIEKANSLINRLLEEGRLSELGIIVIDELH 642

Query:   819 LLHDE-RGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYK-DVATLLRI------KPE 870
             ++ D+ RG +LE ++ + +R            G S+   + K D A  L+I       P 
Sbjct:   643 MVGDQHRGYLLELMLTK-LRYAAGEGSSESSSGESSGTSSGKADPAHGLQIVGMSATMPN 701

Query:   871 TGLF-------YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQLLV 923
              G          +   FRPV LE+ YI V      K+ +V+  I   K  +  G++   +
Sbjct:   702 VGAVADWLQAALYQTEFRPVPLEE-YIKVGSTIYNKKMEVVRTI--PKAADMGGKDPDHI 758

Query:   924 FVHSRKETGKTARAIRDMCLEKDTLGQFLREGSASMEVLRTEADQVKNGELRDLLPYGFA 983
              V    E  +   ++   C  +       R  S  ++ +    D  +N E  D+     A
Sbjct:   759 -VELCNEVVQEGNSVLIFCSSRKGCESTARHISKLIKNVPVNVDG-ENSEFMDIRSAIDA 816

Query:   984 IHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVVDRTLVEDLFADRHIQV 1043
             +  +  + VD  L E L +     V    A L         TV +R +VE  +    ++V
Sbjct:   817 LRRSP-SGVDPVLEETLPSG----VAYHHAGL---------TVEEREIVETCYRKGLVRV 862

Query:  1044 LVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQMLGRAGRPQYDTKGEGV 1103
             L +T+TLA GVNLPA  VI +      P  GR   +      QM GRAGR   DTKG+ V
Sbjct:   863 LTATSTLAAGVNLPARRVIFR-----QPMIGRDF-IDGTRYKQMSGRAGRTGIDTKGDSV 916

Query:  1104 LITNHSELQYYLSLLNHQLP-VESQMISKLPDMLNA--EIVLG-TVQNLKDAVTWLGYTY 1159
             LI    EL+  ++LLN   P ++S +      M +A  E+V G  VQ  KD   ++  T 
Sbjct:   917 LICKPGELKRIMALLNETCPPLQSCLSEDKNGMTHAILEVVAGGIVQTAKDIHRYVRCTL 976

Query:  1160 L 1160
             L
Sbjct:   977 L 977

 Score = 58 (25.5 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
 Identities = 12/24 (50%), Positives = 17/24 (70%)

Query:   499 NLLLCAPTGAGKTNVALLCMLQEI 522
             NL+ CA T AGK+ VA + ML+ +
Sbjct:   533 NLVYCASTSAGKSFVAEVLMLRRV 556

 Score = 37 (18.1 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
 Identities = 10/33 (30%), Positives = 17/33 (51%)

Query:   596 SATLPNYKDVATLLRIKPETGLFYFDNSFRPVA 628
             S  +P+  D+   L  KPE+     +N  +PV+
Sbjct:   195 SENIPSLDDLTNPLGSKPESLARNGNNRDKPVS 227


>ZFIN|ZDB-GENE-040718-328 [details] [associations]
            symbol:sec63 "SEC63-like (S. cerevisiae)"
            species:7955 "Danio rerio" [GO:0031204 "posttranslational protein
            targeting to membrane, translocation" evidence=IEA] [GO:0008565
            "protein transporter activity" evidence=IEA] [GO:0042552
            "myelination" evidence=IMP] [GO:0030968 "endoplasmic reticulum
            unfolded protein response" evidence=IMP] InterPro:IPR027137
            InterPro:IPR001623 Pfam:PF00226 ZFIN:ZDB-GENE-040718-328
            GO:GO:0006457 Gene3D:1.10.287.110 PRINTS:PR00625 SMART:SM00271
            SUPFAM:SSF46565 PROSITE:PS50076 InterPro:IPR004179 Pfam:PF02889
            SMART:SM00611 SMART:SM00973 CTD:11231 HOGENOM:HOG000037933
            HOVERGEN:HBG057075 KO:K09540 PANTHER:PTHR24075 EMBL:BC076198
            IPI:IPI00510190 RefSeq:NP_001002588.1 UniGene:Dr.76509
            ProteinModelPortal:Q6DGY6 STRING:Q6DGY6 PRIDE:Q6DGY6 GeneID:436861
            KEGG:dre:436861 InParanoid:Q6DGY6 NextBio:20831292 Bgee:Q6DGY6
            Uniprot:Q6DGY6
        Length = 751

 Score = 156 (60.0 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
 Identities = 30/91 (32%), Positives = 57/91 (62%)

Query:  1589 LDREDEVTGPVIAPFYPQKREEGWWVVIGDPKTNSLLSIKR--LTLQQKAKIKLDFVAPN 1646
             L+ + +VT PV + F+P++++E WW+ I D K  +L+S+     TL+   +++L F AP+
Sbjct:   621 LETKSKVTHPVYSLFFPEEKQEWWWLYIADRKEQTLVSMPNHVCTLKDTEEVELKFPAPS 680

Query:  1647 P-GHHSYALYFMSDAYLGCDQEYKFSIDVSE 1676
               G++ Y++   SD+++G DQ     ++V E
Sbjct:   681 KTGNYQYSVILRSDSFMGLDQIKPLKLEVHE 711

 Score = 73 (30.8 bits), Expect = 3.6e-09, Sum P(2) = 3.6e-09
 Identities = 16/46 (34%), Positives = 27/46 (58%)

Query:  1491 MEVAQMITQAMWSKDSYLKQLPHFNADIIKRCTEKG--VETVFDIM 1534
             M+++QM+ Q +    S L QLPHF  + ++ C  K   V T+ D++
Sbjct:   365 MKLSQMVVQGLQEAKSPLLQLPHFEEEHLRYCISKKYKVRTLQDLV 410


>ASPGD|ASPL0000004985 [details] [associations]
            symbol:AN6007 species:162425 "Emericella nidulans"
            [GO:0008150 "biological_process" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
            InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
            PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 EMBL:BN001301 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 EMBL:AACD01000102 GO:GO:0008026 eggNOG:COG4581
            HOGENOM:HOG000163048 KO:K12599 OMA:TRLDETC OrthoDB:EOG4WM82R
            RefSeq:XP_663611.1 ProteinModelPortal:Q5B0C3 STRING:Q5B0C3
            EnsemblFungi:CADANIAT00007011 GeneID:2871132 KEGG:ani:AN6007.2
            Uniprot:Q5B0C3
        Length = 1293

 Score = 152 (58.6 bits), Expect = 4.1e-09, Sum P(4) = 4.1e-09
 Identities = 41/127 (32%), Positives = 68/127 (53%)

Query:   908 VYEKVMEHAGRNQLL---VFVHSRKETGKTARAI--RDMC--LEKDTLGQFLREGSASME 960
             V+ +V++H  +  LL   +FV S+K   + A ++  +D C   EK  +   + +    ++
Sbjct:   614 VWVQVVQHLRKENLLPACIFVFSKKRCEQNADSLSNQDFCNASEKSLIHITIEKSLTRLK 673

Query:   961 VLRTEADQVKNGELRDLLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVN 1020
                    Q+    LR+LL  G A+HH G+  + + +VE LFA   ++VL +T T A G+N
Sbjct:   674 QEDRTLPQILR--LRELLSRGIAVHHGGLLPIMKEIVEILFAKTLVKVLFATETFAMGLN 731

Query:  1021 LPAHTVV 1027
             LP  TVV
Sbjct:   732 LPTRTVV 738

 Score = 114 (45.2 bits), Expect = 2.7e-05, Sum P(4) = 2.7e-05
 Identities = 41/115 (35%), Positives = 61/115 (53%)

Query:   993 DRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVVDRTLVEDLFADRHIQVLVSTATLAW 1052
             DRTL + L   R  ++L     +  G  LP    + + +VE LFA   ++VL +T T A 
Sbjct:   676 DRTLPQIL---RLRELLSRGIAVHHGGLLP----IMKEIVEILFAKTLVKVLFATETFAM 728

Query:  1053 GVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQMLGRAGRPQYDTKGEGVLITN 1107
             G+NLP  TV+  G + ++  KG + +L   +  QM GRAGR   D  G  V++ N
Sbjct:   729 GLNLPTRTVVFSGFRKHDG-KG-FRDLLPGEYTQMAGRAGRRGLDNVGY-VIVVN 780

 Score = 84 (34.6 bits), Expect = 4.1e-09, Sum P(4) = 4.1e-09
 Identities = 27/83 (32%), Positives = 43/83 (51%)

Query:   559 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGL 617
             DE+H ++D ERG V E +I           E V L+ LSAT+PN ++ A+ +    +  +
Sbjct:   435 DEVHYVNDLERGVVWEEVIIML-------PEHVTLILLSATVPNTQEFASWVGRTKKKDI 487

Query:   618 FYFDNSFRPVALEQQYIGVTEKK 640
             +    + RPV LE  Y+   + K
Sbjct:   488 YVISTAKRPVPLEH-YLWAGKDK 509

 Score = 84 (34.6 bits), Expect = 4.1e-09, Sum P(4) = 4.1e-09
 Identities = 27/83 (32%), Positives = 43/83 (51%)

Query:   815 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGL 873
             DE+H ++D ERG V E +I           E V L+ LSAT+PN ++ A+ +    +  +
Sbjct:   435 DEVHYVNDLERGVVWEEVIIML-------PEHVTLILLSATVPNTQEFASWVGRTKKKDI 487

Query:   874 FYFDNSFRPVALEQQYIGVTEKK 896
             +    + RPV LE  Y+   + K
Sbjct:   488 YVISTAKRPVPLEH-YLWAGKDK 509

 Score = 53 (23.7 bits), Expect = 4.1e-09, Sum P(4) = 4.1e-09
 Identities = 20/73 (27%), Positives = 36/73 (49%)

Query:   494 LESDENLLLCAPTGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMV 553
             LE+ +++ + A T AGKT VA   +     KH+           K IY +P+++L  +  
Sbjct:   334 LENGDSVFVAAHTSAGKTVVAEYAIALA-AKHMT----------KAIYTSPIKALSNQKF 382

Query:   554 GNFGK--DEIHLL 564
              +F    D++ +L
Sbjct:   383 RDFKNTFDDVGIL 395

 Score = 42 (19.8 bits), Expect = 4.1e-09, Sum P(4) = 4.1e-09
 Identities = 30/115 (26%), Positives = 53/115 (46%)

Query:  1392 GPNEIGELIRVPKLGKTIHKYVHQFPKLE-LATHIQPI-TRS---TLRV-ELTISPDFQW 1445
             GPN + +++ + KL    H      P L      + P+ TR+   TL+V ++ I+ D + 
Sbjct:   928 GPNPVIQILEIGKLNSKRHPS-EILPFLPAFRGFLNPLPTRAADMTLKVFKIPIA-DIEC 985

Query:  1446 DE----KLHGGSEGFWILVEDVDSEAIRLIQACVDVLSSNGWLSPAVAAMEVAQM 1496
                   KL G +   W L  ++  EAIR     +  L S+ W +P    ++ A++
Sbjct:   986 VTNTIVKLSGPT---WYL--NIKKEAIRFADKELSKLCSS-WTTPVWDELDWARI 1034

 Score = 41 (19.5 bits), Expect = 6.1e-08, Sum P(4) = 6.1e-08
 Identities = 10/22 (45%), Positives = 12/22 (54%)

Query:   688 GGSEGFWILVEDVDSEVVLHHE 709
             GG E  W  V DV+ E+   HE
Sbjct:   291 GGKE--WAHVVDVNKEISNFHE 310


>UNIPROTKB|E1C0C3 [details] [associations]
            symbol:SEC63 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0008565 "protein transporter activity" evidence=IEA]
            [GO:0031204 "posttranslational protein targeting to membrane,
            translocation" evidence=IEA] InterPro:IPR027137 InterPro:IPR001623
            Pfam:PF00226 GO:GO:0006457 Gene3D:1.10.287.110 PRINTS:PR00625
            SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS50076 InterPro:IPR004179
            Pfam:PF02889 SMART:SM00611 SMART:SM00973 OMA:TIENCMK
            PANTHER:PTHR24075 GeneTree:ENSGT00390000001965 EMBL:AADN02002108
            EMBL:AADN02002106 EMBL:AADN02002107 IPI:IPI00581078
            Ensembl:ENSGALT00000024710 Uniprot:E1C0C3
        Length = 759

 Score = 171 (65.3 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
 Identities = 32/91 (35%), Positives = 56/91 (61%)

Query:  1589 LDREDEVTGPVIAPFYPQKREEGWWVVIGDPKTNSLLSIKR--LTLQQKAKIKLDFVAPN 1646
             L+ + ++T PV + F+P++++E WW+ I D K   L+ +     TL+ K +++L F AP 
Sbjct:   627 LETKSKITHPVYSLFFPEEKQEWWWLYIADRKEQMLICMPYHVCTLKDKEEVELKFPAPG 686

Query:  1647 -PGHHSYALYFMSDAYLGCDQEYKFSIDVSE 1676
              PG++ Y +Y  SD+Y+G DQ     ++V E
Sbjct:   687 KPGNYQYTVYLRSDSYMGLDQIKPLKLEVHE 717

 Score = 56 (24.8 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
 Identities = 12/31 (38%), Positives = 18/31 (58%)

Query:  1491 MEVAQMITQAMWSKDSYLKQLPHFNADIIKR 1521
             M+++QM  Q +    S L QLPH   D ++R
Sbjct:   367 MKLSQMTVQGLQQFKSPLLQLPHIEEDNLRR 397


>UNIPROTKB|J9P962 [details] [associations]
            symbol:SEC63 "Translocation protein SEC63 homolog"
            species:9615 "Canis lupus familiaris" [GO:0031204
            "posttranslational protein targeting to membrane, translocation"
            evidence=IEA] [GO:0008565 "protein transporter activity"
            evidence=IEA] InterPro:IPR027137 PANTHER:PTHR24075
            GeneTree:ENSGT00390000001965 EMBL:AAEX03008592
            Ensembl:ENSCAFT00000044784 OMA:TSPPIFR Uniprot:J9P962
        Length = 280

 Score = 165 (63.1 bits), Expect = 5.5e-09, P = 5.5e-09
 Identities = 30/91 (32%), Positives = 57/91 (62%)

Query:  1589 LDREDEVTGPVIAPFYPQKREEGWWVVIGDPKTNSLLSIKR--LTLQQKAKIKLDFVAPN 1646
             L+ + ++T PV + ++P++++E WW+ I D K  +L+S+     TL+   +++L F AP 
Sbjct:   148 LETKSKITHPVYSLYFPEEKQEWWWLYIADRKEQTLISMPYHVCTLKDTEEVELKFPAPG 207

Query:  1647 -PGHHSYALYFMSDAYLGCDQEYKFSIDVSE 1676
              PG++ Y ++  SD+Y+G DQ     ++V E
Sbjct:   208 KPGNYQYTVFLRSDSYMGLDQIKPLKLEVHE 238


>GENEDB_PFALCIPARUM|PFF0100w [details] [associations]
            symbol:PFF0100w "putative ATP dependent RNA
            helicase" species:5833 "Plasmodium falciparum" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISS]
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
            InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
            PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 EMBL:AL844505 HOGENOM:HOG000163047 KO:K12598
            InterPro:IPR025696 Pfam:PF13234 RefSeq:XP_966011.1
            ProteinModelPortal:C6KSM1 EnsemblProtists:PFF0100w:mRNA
            GeneID:3885738 KEGG:pfa:PFF0100w EuPathDB:PlasmoDB:PF3D7_0602100
            OMA:RGIVIIM ProtClustDB:CLSZ2433467 Uniprot:C6KSM1
        Length = 1350

 Score = 154 (59.3 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
 Identities = 48/153 (31%), Positives = 80/153 (52%)

Query:   887 QQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQ--LLVFVHSRKETGKTARAIRDMCLE 944
             QQ+I    KK  K    +  IV    M H+ RN   L++F  S+KE    A A+  + L 
Sbjct:   478 QQHINKYTKKMRKTTYDIEKIVQ---MCHS-RNYTPLIIFAFSKKECEVNATAMHKIDLT 533

Query:   945 KDTLGQFLREGSASMEVLRTEADQVKN-GELRDLLPY---GFAIHHAGMTRVDRTLVEDL 1000
              DT  + ++E       +R  AD  ++  +++ +LP    G  IHH G+  + + ++E +
Sbjct:   534 SDTEKEVIKE--LYENAIRILADDDRSLPQVQFILPLLLRGIGIHHGGLLPIIKEIIEIM 591

Query:  1001 FADRHIQVLVSTATLAWGVNLPAHTVVDRTLVE 1033
             F +  ++VL ST T + G+N+PA TVV  +L +
Sbjct:   592 FQESLLKVLFSTETFSMGINMPAKTVVFTSLTK 624

 Score = 66 (28.3 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
 Identities = 30/87 (34%), Positives = 43/87 (49%)

Query:   559 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLR-IKPET- 615
             DEIH + D +RG + E     TI  +      VR + LSAT+PN    A  +  IK +  
Sbjct:   367 DEIHYMRDRDRGVIWE----ETIILLPLM---VRFIFLSATIPNGIQFAEWVSSIKSQAC 419

Query:   616 GLFYFDNSFRPVALEQQYIGVTEKKAL 642
              + Y D  +RP  L Q YI  T  +++
Sbjct:   420 HIVYTD--YRPTPL-QHYIYPTSSESV 443

 Score = 60 (26.2 bits), Expect = 1.3e-08, Sum P(3) = 1.3e-08
 Identities = 19/66 (28%), Positives = 37/66 (56%)

Query:   494 LESDENLLLCAPTGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMV 553
             LE +E++L+ A T AGKT +A         ++  A G    D+ ++IY +P+++L  +  
Sbjct:   266 LERNESVLVSAHTSAGKTVIA---------EYAIALGL--RDKQRVIYTSPIKALSNQKY 314

Query:   554 GNFGKD 559
              + G++
Sbjct:   315 RDLGEE 320

 Score = 42 (19.8 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
 Identities = 6/25 (24%), Positives = 17/25 (68%)

Query:   791 DEFKIIYVAPMRSLVQEMVGNFGKD 815
             D+ ++IY +P+++L  +   + G++
Sbjct:   296 DKQRVIYTSPIKALSNQKYRDLGEE 320


>UNIPROTKB|E1B7B1 [details] [associations]
            symbol:SEC63 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0031204 "posttranslational protein targeting to
            membrane, translocation" evidence=IEA] [GO:0008565 "protein
            transporter activity" evidence=IEA] InterPro:IPR027137
            InterPro:IPR001623 Pfam:PF00226 GO:GO:0006457 Gene3D:1.10.287.110
            PRINTS:PR00625 SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS50076
            InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
            CTD:11231 KO:K09540 OMA:TIENCMK PANTHER:PTHR24075
            GeneTree:ENSGT00390000001965 EMBL:DAAA02025946 IPI:IPI00824491
            RefSeq:NP_001179744.1 UniGene:Bt.91327 ProteinModelPortal:E1B7B1
            Ensembl:ENSBTAT00000022030 GeneID:541040 KEGG:bta:541040
            NextBio:20878972 Uniprot:E1B7B1
        Length = 760

 Score = 165 (63.1 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
 Identities = 30/91 (32%), Positives = 57/91 (62%)

Query:  1589 LDREDEVTGPVIAPFYPQKREEGWWVVIGDPKTNSLLSIKR--LTLQQKAKIKLDFVAPN 1646
             L+ + ++T PV + ++P++++E WW+ I D K  +L+S+     TL+   +++L F AP 
Sbjct:   628 LETKSKITHPVYSLYFPEEKQEWWWLYIADRKEQTLISMPYHVCTLKDTEEVELKFPAPG 687

Query:  1647 -PGHHSYALYFMSDAYLGCDQEYKFSIDVSE 1676
              PG++ Y ++  SD+Y+G DQ     ++V E
Sbjct:   688 KPGNYQYTVFLRSDSYMGLDQIKPLKLEVHE 718

 Score = 58 (25.5 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
 Identities = 14/47 (29%), Positives = 26/47 (55%)

Query:  1491 MEVAQMITQAMWSKDSYLKQLPHFNADIIKRCTEKG---VETVFDIM 1534
             M+++QM  Q +    S L QLPH   D ++R +      ++T+ D++
Sbjct:   367 MKLSQMAVQGLQQFKSPLLQLPHIEEDNLRRVSNHKKFKIKTIQDLV 413


>UNIPROTKB|Q9UGP8 [details] [associations]
            symbol:SEC63 "Translocation protein SEC63 homolog"
            species:9606 "Homo sapiens" [GO:0008565 "protein transporter
            activity" evidence=IEA] [GO:0031204 "posttranslational protein
            targeting to membrane, translocation" evidence=IEA] [GO:0016021
            "integral to membrane" evidence=IEA] [GO:0005789 "endoplasmic
            reticulum membrane" evidence=IEA] [GO:0004872 "receptor activity"
            evidence=TAS] [GO:0005783 "endoplasmic reticulum" evidence=TAS]
            [GO:0006612 "protein targeting to membrane" evidence=TAS]
            InterPro:IPR027137 InterPro:IPR001623 EMBL:AF100141 Pfam:PF00226
            GO:GO:0005783 GO:GO:0016021 GO:GO:0006457 GO:GO:0005789
            GO:GO:0006612 GO:GO:0004872 Gene3D:1.10.287.110 PRINTS:PR00625
            SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS00636 PROSITE:PS50076
            InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
            TCDB:3.A.5.9.1 MIM:174050 Orphanet:2924 EMBL:AJ011779 EMBL:AL024507
            EMBL:BC023598 EMBL:BC047221 EMBL:BC048287 EMBL:AL137338
            IPI:IPI00218922 PIR:T46504 RefSeq:NP_009145.1 UniGene:Hs.26904
            ProteinModelPortal:Q9UGP8 SMR:Q9UGP8 IntAct:Q9UGP8 STRING:Q9UGP8
            PhosphoSite:Q9UGP8 DMDM:18203500 PaxDb:Q9UGP8 PeptideAtlas:Q9UGP8
            PRIDE:Q9UGP8 DNASU:11231 Ensembl:ENST00000369002 GeneID:11231
            KEGG:hsa:11231 UCSC:uc003psb.4 CTD:11231 GeneCards:GC06M108237
            HGNC:HGNC:21082 MIM:608648 neXtProt:NX_Q9UGP8 PharmGKB:PA134936990
            eggNOG:COG5407 HOGENOM:HOG000037933 HOVERGEN:HBG057075
            InParanoid:Q9UGP8 KO:K09540 OMA:TIENCMK OrthoDB:EOG48PMJQ
            PhylomeDB:Q9UGP8 ChiTaRS:sec63 GenomeRNAi:11231 NextBio:42742
            ArrayExpress:Q9UGP8 Bgee:Q9UGP8 CleanEx:HS_SEC63
            Genevestigator:Q9UGP8 GermOnline:ENSG00000025796 PANTHER:PTHR24075
            Uniprot:Q9UGP8
        Length = 760

 Score = 165 (63.1 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
 Identities = 30/91 (32%), Positives = 57/91 (62%)

Query:  1589 LDREDEVTGPVIAPFYPQKREEGWWVVIGDPKTNSLLSIKR--LTLQQKAKIKLDFVAPN 1646
             L+ + ++T PV + ++P++++E WW+ I D K  +L+S+     TL+   +++L F AP 
Sbjct:   628 LETKSKITHPVYSLYFPEEKQEWWWLYIADRKEQTLISMPYHVCTLKDTEEVELKFPAPG 687

Query:  1647 -PGHHSYALYFMSDAYLGCDQEYKFSIDVSE 1676
              PG++ Y ++  SD+Y+G DQ     ++V E
Sbjct:   688 KPGNYQYTVFLRSDSYMGLDQIKPLKLEVHE 718

 Score = 58 (25.5 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
 Identities = 14/47 (29%), Positives = 26/47 (55%)

Query:  1491 MEVAQMITQAMWSKDSYLKQLPHFNADIIKRCTEKG---VETVFDIM 1534
             M+++QM  Q +    S L QLPH   D ++R +      ++T+ D++
Sbjct:   367 MKLSQMAVQGLQQFKSPLLQLPHIEEDNLRRVSNHKKYKIKTIQDLV 413


>MGI|MGI:2155302 [details] [associations]
            symbol:Sec63 "SEC63-like (S. cerevisiae)" species:10090 "Mus
            musculus" [GO:0001889 "liver development" evidence=IGI;IMP]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0005783
            "endoplasmic reticulum" evidence=IEA] [GO:0006807 "nitrogen
            compound metabolic process" evidence=IGI] [GO:0006810 "transport"
            evidence=IEA] [GO:0010259 "multicellular organismal aging"
            evidence=IMP] [GO:0015031 "protein transport" evidence=IEA]
            [GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
            membrane" evidence=IEA] [GO:0072001 "renal system development"
            evidence=IGI] InterPro:IPR027137 InterPro:IPR001623 Pfam:PF00226
            MGI:MGI:2155302 GO:GO:0016021 GO:GO:0006457 GO:GO:0005789
            GO:GO:0015031 GO:GO:0006807 Gene3D:1.10.287.110 PRINTS:PR00625
            SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS00636 PROSITE:PS50076
            InterPro:IPR004179 Pfam:PF02889 SMART:SM00611 SMART:SM00973
            GO:GO:0072001 CTD:11231 eggNOG:COG5407 HOGENOM:HOG000037933
            HOVERGEN:HBG057075 KO:K09540 OMA:TIENCMK OrthoDB:EOG48PMJQ
            ChiTaRS:sec63 PANTHER:PTHR24075 EMBL:AY024346 EMBL:AC124998
            EMBL:BC019366 EMBL:BC031846 IPI:IPI00330857 RefSeq:NP_694695.3
            UniGene:Mm.214344 ProteinModelPortal:Q8VHE0 SMR:Q8VHE0
            STRING:Q8VHE0 PhosphoSite:Q8VHE0 PaxDb:Q8VHE0 PRIDE:Q8VHE0
            Ensembl:ENSMUST00000019937 GeneID:140740 KEGG:mmu:140740
            UCSC:uc007eyx.2 GeneTree:ENSGT00390000001965 InParanoid:Q8VHE0
            NextBio:369955 Bgee:Q8VHE0 CleanEx:MM_SEC63 Genevestigator:Q8VHE0
            GermOnline:ENSMUSG00000019802 Uniprot:Q8VHE0
        Length = 760

 Score = 165 (63.1 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
 Identities = 30/91 (32%), Positives = 57/91 (62%)

Query:  1589 LDREDEVTGPVIAPFYPQKREEGWWVVIGDPKTNSLLSIKR--LTLQQKAKIKLDFVAPN 1646
             L+ + ++T PV + ++P++++E WW+ I D K  +L+S+     TL+   +++L F AP 
Sbjct:   628 LETKSKITHPVYSLYFPEEKQEWWWLYIADRKEQTLISMPYHVCTLKDTEEVELKFPAPG 687

Query:  1647 -PGHHSYALYFMSDAYLGCDQEYKFSIDVSE 1676
              PG++ Y ++  SD+Y+G DQ     ++V E
Sbjct:   688 KPGNYQYTVFLRSDSYMGLDQIKPLKLEVHE 718

 Score = 58 (25.5 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
 Identities = 14/47 (29%), Positives = 26/47 (55%)

Query:  1491 MEVAQMITQAMWSKDSYLKQLPHFNADIIKRCTEKG---VETVFDIM 1534
             M+++QM  Q +    S L QLPH   D ++R +      ++T+ D++
Sbjct:   367 MKLSQMAVQGLQQFKSPLLQLPHIEEDNLRRVSNHKKYKIKTIQDLV 413


>POMBASE|SPAC17H9.02 [details] [associations]
            symbol:SPAC17H9.02 "TRAMP complex ATP-dependent RNA
            helicase (predicted)" species:4896 "Schizosaccharomyces pombe"
            [GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISO]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=ISO] [GO:0006364
            "rRNA processing" evidence=ISO] [GO:0016078 "tRNA catabolic
            process" evidence=ISO] [GO:0031499 "TRAMP complex" evidence=ISO]
            [GO:0043630 "ncRNA polyadenylation involved in
            polyadenylation-dependent ncRNA catabolic process" evidence=ISO]
            [GO:0071049 "nuclear retention of pre-mRNA with aberrant 3'-ends at
            the site of transcription" evidence=ISO] InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
            PROSITE:PS51194 SMART:SM00490 PomBase:SPAC17H9.02 GO:GO:0005524
            EMBL:CU329670 GO:GO:0005730 GO:GO:0003676 GO:GO:0031499
            GO:GO:0043630 GO:GO:0016078 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004 eggNOG:COG4581
            HOGENOM:HOG000163047 KO:K12598 InterPro:IPR025696 Pfam:PF13234
            OrthoDB:EOG4S1XG7 GO:GO:0071049 PIR:T37868 RefSeq:NP_593572.1
            ProteinModelPortal:O13799 STRING:O13799 EnsemblFungi:SPAC17H9.02.1
            GeneID:2542173 KEGG:spo:SPAC17H9.02 OMA:FARWISE NextBio:20803244
            Uniprot:O13799
        Length = 1030

 Score = 172 (65.6 bits), Expect = 1.8e-08, Sum P(3) = 1.8e-08
 Identities = 90/331 (27%), Positives = 151/331 (45%)

Query:   815 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLL-RI-KPET 871
             DE+H + D +RG V E  +           + +R + LSATLPN    A  +  I K   
Sbjct:   238 DEVHYMRDKDRGVVWEETLI-------LLPDAIRFIFLSATLPNALQFARWISEIHKQPC 290

Query:   872 GLFYFDNSFRPVALEQ----Q-----YIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQLL 922
              + Y D  +RP  L+     Q     Y+ V EK    +F+  N     +V++H+ R +  
Sbjct:   291 HVVYTD--YRPTPLQHFIYPQGADGIYMLVDEKN---KFKTENFKKVLEVLDHSTRQEN- 344

Query:   923 VFVHSRKETGKTARAIR--DMCLEK--DTLGQFL---REGSASMEVL-RTEADQVKNGEL 974
              +  S K+  K++   R  +M L    D +  F    +E   +     + + +  +N EL
Sbjct:   345 -YSKSSKKVKKSSSLERIINMVLSNRYDPIIVFCFSKKECEINAHQFGKLDLNDTENKEL 403

Query:   975 RDLLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVVDRTLVED 1034
                + +  AI+   ++  DR L       R  + + S      G++      + + LVE 
Sbjct:   404 VTEI-FDSAINQ--LSEEDRGL-------RQFEEMRSLLLRGIGIHHSGLLPILKELVEI 453

Query:  1035 LFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQMLGRAGRP 1094
             LF +  +++L +T T + G+N+PA TV+    Q ++    RW+  G  + +QM GRAGR 
Sbjct:   454 LFQEGLVRILFATETFSIGLNMPARTVLFTKAQKFSGNNFRWLTSG--EYMQMSGRAGRR 511

Query:  1095 QYDTKGEGVLITNHS-ELQYYLSLLNHQLPV 1124
               DTKG  ++I + S + Q    L+N Q  V
Sbjct:   512 GIDTKGLSIVILDQSIDEQAARCLMNGQADV 542

 Score = 65 (27.9 bits), Expect = 1.8e-08, Sum P(3) = 1.8e-08
 Identities = 30/110 (27%), Positives = 54/110 (49%)

Query:   454 KPMGPDE-TLVPIDK-LPRYVQHAFEDFKTLNRIQSRLCKSALESDENLLLCAPTGAGKT 511
             K + PD+   +P++K +P         F+ L+  QS   K  +E  E++L+ A T AGKT
Sbjct:    97 KVVVPDDYDYIPLNKHIPSDPPAKTYPFE-LDPFQSTAIK-CVERMESVLVSAHTSAGKT 154

Query:   512 NVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSL----VQEMVGNFG 557
              +A   + Q +            +  ++IY +P++SL     +E++  FG
Sbjct:   155 VIAEYAIAQAL-----------KNRQRVIYTSPIKSLSNQKYRELLSEFG 193

 Score = 40 (19.1 bits), Expect = 5.6e-06, Sum P(3) = 5.6e-06
 Identities = 8/24 (33%), Positives = 16/24 (66%)

Query:   794 KIIYVAPMRSL----VQEMVGNFG 813
             ++IY +P++SL     +E++  FG
Sbjct:   170 RVIYTSPIKSLSNQKYRELLSEFG 193

 Score = 37 (18.1 bits), Expect = 1.8e-08, Sum P(3) = 1.8e-08
 Identities = 8/16 (50%), Positives = 10/16 (62%)

Query:   411 DLEDLQFSSGSHFMSN 426
             D ++ QFS GS   SN
Sbjct:     7 DSKNFQFSEGSRESSN 22


>UNIPROTKB|E1BMC0 [details] [associations]
            symbol:POLQ "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0043142 "single-stranded DNA-dependent ATPase activity"
            evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0003887
            "DNA-directed DNA polymerase activity" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001098
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012337
            InterPro:IPR019760 Pfam:PF00270 Pfam:PF00271 Pfam:PF00476
            PROSITE:PS00447 PROSITE:PS51194 SMART:SM00482 SMART:SM00490
            GO:GO:0005524 GO:GO:0003677 GO:GO:0006260 GO:GO:0006281
            SUPFAM:SSF53098 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GeneTree:ENSGT00640000091272 GO:GO:0008026 GO:GO:0003887
            GO:GO:0043142 EMBL:DAAA02001581 EMBL:DAAA02001582 EMBL:DAAA02001583
            IPI:IPI00687324 Ensembl:ENSBTAT00000002501 OMA:CFSDESI
            Uniprot:E1BMC0
        Length = 2728

 Score = 175 (66.7 bits), Expect = 3.6e-08, Sum P(3) = 3.6e-08
 Identities = 101/383 (26%), Positives = 171/383 (44%)

Query:   807 EMVGNFGKDEIHLLHDE-RGPVLEALIART--IRNIEAT-QEDVRLVGLSATLPNYKDVA 862
             +++G    DE+H+L D  RG +LE L+ +   I    A+ Q D+  + LS  +      A
Sbjct:   340 DLLGMVVVDELHMLGDSHRGYLLELLLTKICYITQKSASCQADLA-IPLSNAVQIVGMSA 398

Query:   863 TLLRIKPETGLF---YFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGRN 919
             TL  ++          +   FRPV L +  I +         +++ +  ++ +++  G  
Sbjct:   399 TLPNLELVASWLNAELYHTDFRPVPLLES-IKIGNSIYDSSMKLVRE--FQPMLQVKGDE 455

Query:   920 QLLVFVHSRKETGKTARAIRDMCLEK---DTLGQFLREGSASMEVLRTEADQVKNGELRD 976
               +V +    ET +   ++   C  K   + L   +     S+         V++ EL  
Sbjct:   456 DHVVSLCY--ETVRDNHSVLLFCPSKKWCEKLADIIAREFYSLHHQAEVTGLVRSSELPP 513

Query:   977 LLPYGFAIHHAGMTRV-DRTLVEDLFADRHIQVLVSTATLAWGVNL--PAHTVVDRTLVE 1033
             ++     +   G+  V D+        D  +Q      T+ WGV       T  +R ++E
Sbjct:   514 VM-----LEQKGLLEVMDQLKRSPSGLDSVLQ-----KTVPWGVAFHHAGLTFEERDIIE 563

Query:  1034 DLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQMLGRAGR 1093
               F    I+VL +T+TL+ GVNLPA  VII+ T I++   GR +++  L   QM+GRAGR
Sbjct:   564 GAFRQGQIRVLAATSTLSSGVNLPARRVIIR-TPIFS---GRLLDI--LTYKQMVGRAGR 617

Query:  1094 PQYDT---KGEGVLITNHSELQYYLSLLNHQL-PVESQMISK-----LPDMLNA--EIVL 1142
                DT    GE +L+  +SE    ++LL   L PV S +           M+ A  EI++
Sbjct:   618 KGVDTVGNTGESILVCKNSEKSKGITLLQGSLKPVHSCLQRHEGEEVTSSMIRAILEIIV 677

Query:  1143 GTVQNL-KDAVTWLGYTYLYIRM 1164
             G V +  +D  T+   T+L   M
Sbjct:   678 GGVASTSQDIQTYASCTFLAASM 700

 Score = 71 (30.1 bits), Expect = 3.6e-08, Sum P(3) = 3.6e-08
 Identities = 41/130 (31%), Positives = 53/130 (40%)

Query:   407 RQVLDLEDLQFSSGSHFMSNKRCELPDGSFRKQRKGYEEVHVPALKPKPMGPDETLVP-- 464
             +Q     DL  SSGS F  +    L  G       G       +LK  P G  +   P  
Sbjct:   141 KQRRSASDLNSSSGSGFDGSDSPLLLSGPVLSPPPGLGR----SLKFSPKGECKQTFPDD 196

Query:   465 -IDKL-------PRYVQHAFEDF--KTLNRIQSR--LCKSALESDENLLLCAPTGAGKTN 512
              IDKL       P  V   +  F  K +   Q+   L    LE  +NL+  APT AGKT 
Sbjct:   197 QIDKLLLANWGLPTAVLEKYHSFGVKKMFEWQAECLLLGQVLEG-KNLVYSAPTSAGKTL 255

Query:   513 VALLCMLQEI 522
             VA L +L+ +
Sbjct:   256 VAELLILKRV 265

 Score = 41 (19.5 bits), Expect = 3.5e-05, Sum P(3) = 3.5e-05
 Identities = 9/21 (42%), Positives = 13/21 (61%)

Query:   758 FRLPRGAGKTNVALLCMLQEI 778
             +  P  AGKT VA L +L+ +
Sbjct:   245 YSAPTSAGKTLVAELLILKRV 265

 Score = 39 (18.8 bits), Expect = 3.6e-08, Sum P(3) = 3.6e-08
 Identities = 7/21 (33%), Positives = 12/21 (57%)

Query:  1511 LPHFNADIIKRCTEKG-VETV 1530
             + HF  + +K C   G V+T+
Sbjct:  2559 ISHFMRETVKNCKRDGFVQTI 2579


>TAIR|locus:2026001 [details] [associations]
            symbol:MTR4 "homolog of yeast MTR4" species:3702
            "Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISM;IDA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA;ISS] [GO:0016817 "hydrolase activity, acting on acid
            anhydrides" evidence=IEA] [GO:0016818 "hydrolase activity, acting
            on acid anhydrides, in phosphorus-containing anhydrides"
            evidence=IEA] [GO:0006364 "rRNA processing" evidence=IMP]
            [GO:0031125 "rRNA 3'-end processing" evidence=IMP] [GO:0000398
            "mRNA splicing, via spliceosome" evidence=RCA] [GO:0000724
            "double-strand break repair via homologous recombination"
            evidence=RCA] [GO:0000741 "karyogamy" evidence=RCA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=RCA]
            [GO:0006406 "mRNA export from nucleus" evidence=RCA] [GO:0006606
            "protein import into nucleus" evidence=RCA] [GO:0009560 "embryo sac
            egg cell differentiation" evidence=RCA] [GO:0009640
            "photomorphogenesis" evidence=RCA] [GO:0009909 "regulation of
            flower development" evidence=RCA] [GO:0010074 "maintenance of
            meristem identity" evidence=RCA] [GO:0010212 "response to ionizing
            radiation" evidence=RCA] [GO:0010388 "cullin deneddylation"
            evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
            [GO:0016571 "histone methylation" evidence=RCA] [GO:0016579
            "protein deubiquitination" evidence=RCA] [GO:0030422 "production of
            siRNA involved in RNA interference" evidence=RCA] [GO:0035196
            "production of miRNAs involved in gene silencing by miRNA"
            evidence=RCA] [GO:0043687 "post-translational protein modification"
            evidence=RCA] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=RCA] [GO:0048825 "cotyledon development"
            evidence=RCA] [GO:0051301 "cell division" evidence=RCA]
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
            InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
            PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005634 GO:GO:0003676
            EMBL:AC007258 UniGene:At.74832 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 GO:GO:0031125 eggNOG:COG4581
            HOGENOM:HOG000163047 KO:K12598 OMA:ENFQKAM InterPro:IPR025696
            Pfam:PF13234 EMBL:AK176836 IPI:IPI00536033 PIR:E96621
            RefSeq:NP_176185.1 UniGene:At.43462 ProteinModelPortal:Q9XIF2
            SMR:Q9XIF2 PaxDb:Q9XIF2 PRIDE:Q9XIF2 EnsemblPlants:AT1G59760.1
            GeneID:842269 KEGG:ath:AT1G59760 TAIR:At1g59760 InParanoid:Q9XIF2
            PhylomeDB:Q9XIF2 ProtClustDB:CLSN2679700 ArrayExpress:Q9XIF2
            Genevestigator:Q9XIF2 Uniprot:Q9XIF2
        Length = 988

 Score = 126 (49.4 bits), Expect = 5.5e-08, Sum P(3) = 5.5e-08
 Identities = 27/79 (34%), Positives = 48/79 (60%)

Query:  1029 RTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQML 1088
             + ++E LF +  I+ L +T T + G+N+PA TV+    + ++ +K RW+  G  + +QM 
Sbjct:   398 KEVIEILFQEGLIKCLFATETFSIGLNMPAKTVVFTNVRKFDGDKFRWLSSG--EYIQMS 455

Query:  1089 GRAGRPQYDTKGEGVLITN 1107
             GRAGR   D +G  +L+ +
Sbjct:   456 GRAGRRGIDKRGICILMVD 474

 Score = 117 (46.2 bits), Expect = 4.7e-07, Sum P(3) = 4.7e-07
 Identities = 32/110 (29%), Positives = 59/110 (53%)

Query:   921 LLVFVHSRKETGKTARAIRDMCLEKDTLGQFLREGSASMEVLRTEADQVKNGELRDLLPY 980
             +++F  S+KE    A  +  M L  D     +    AS   + ++ D+ K  ++ ++LP 
Sbjct:   323 VILFSFSKKECEALAMQMSKMVLNSDDEKDAVETIFASAIDMLSDDDK-KLPQVSNILPI 381

Query:   981 ---GFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
                G  +HH+G+  + + ++E LF +  I+ L +T T + G+N+PA TVV
Sbjct:   382 LKRGIGVHHSGLLPILKEVIEILFQEGLIKCLFATETFSIGLNMPAKTVV 431

 Score = 76 (31.8 bits), Expect = 5.5e-08, Sum P(3) = 5.5e-08
 Identities = 28/79 (35%), Positives = 40/79 (50%)

Query:   559 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVAT-LLRIKPET- 615
             DE+H + D ERG V E  I    +N        R V LSAT+PN K+ A  + ++  +  
Sbjct:   180 DEVHYMRDSERGVVWEESIVMAPKNS-------RFVFLSATVPNAKEFADWVAKVHQQPC 232

Query:   616 GLFYFDNSFRPVALEQQYI 634
              + Y D  +RP  L Q Y+
Sbjct:   233 HIVYTD--YRPTPL-QHYV 248

 Score = 76 (31.8 bits), Expect = 5.5e-08, Sum P(3) = 5.5e-08
 Identities = 28/79 (35%), Positives = 40/79 (50%)

Query:   815 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVAT-LLRIKPET- 871
             DE+H + D ERG V E  I    +N        R V LSAT+PN K+ A  + ++  +  
Sbjct:   180 DEVHYMRDSERGVVWEESIVMAPKNS-------RFVFLSATVPNAKEFADWVAKVHQQPC 232

Query:   872 GLFYFDNSFRPVALEQQYI 890
              + Y D  +RP  L Q Y+
Sbjct:   233 HIVYTD--YRPTPL-QHYV 248

 Score = 68 (29.0 bits), Expect = 5.5e-08, Sum P(3) = 5.5e-08
 Identities = 24/85 (28%), Positives = 44/85 (51%)

Query:   477 EDFK-TLNRIQSRLCKSALESDENLLLCAPTGAGKTNVALLCMLQEIGKHINADGTINAD 535
             +DF  TL+  QS   K  L++ E++++ A T AGKT VA   +   +            +
Sbjct:    62 KDFPFTLDSFQSEAIK-CLDNGESVMVSAHTSAGKTVVASYAIAMSL-----------KE 109

Query:   536 EFKIIYVAPMRSLVQEMVGNFGKDE 560
               ++IY +P+++L  +   +F K+E
Sbjct:   110 NQRVIYTSPIKALSNQKYRDF-KEE 133

 Score = 38 (18.4 bits), Expect = 5.3e-05, Sum P(3) = 5.3e-05
 Identities = 7/23 (30%), Positives = 16/23 (69%)

Query:   794 KIIYVAPMRSLVQEMVGNFGKDE 816
             ++IY +P+++L  +   +F K+E
Sbjct:   112 RVIYTSPIKALSNQKYRDF-KEE 133


>TAIR|locus:2090744 [details] [associations]
            symbol:AT3G28870 "AT3G28870" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002686 InterPro:IPR004179 SMART:SM00973
            InterPro:IPR013194 Pfam:PF08295 IPI:IPI00541068 RefSeq:NP_189529.1
            UniGene:At.53548 ProteinModelPortal:F4J0F5 SMR:F4J0F5
            EnsemblPlants:AT3G28870.1 GeneID:822521 KEGG:ath:AT3G28870
            ArrayExpress:F4J0F5 Uniprot:F4J0F5
        Length = 355

 Score = 159 (61.0 bits), Expect = 6.0e-08, P = 6.0e-08
 Identities = 30/47 (63%), Positives = 35/47 (74%)

Query:  1628 KRLTLQQKAKIKLDFVAPN-PGHHSYALYFMSDAYLGCDQEYKFSID 1673
             K L  + KAK+KLDF  P+ PG  SY LYFM D+YLGCDQEY FS+D
Sbjct:   297 KGLGQELKAKVKLDFTVPSEPGEKSYTLYFMCDSYLGCDQEYSFSVD 343


>POMBASE|SPCC550.03c [details] [associations]
            symbol:SPCC550.03c "Ski complex RNA helicase Ski2
            (predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
            "RNA binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
            evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730
            "nucleolus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
            [GO:0005829 "cytosol" evidence=IDA] [GO:0006402 "mRNA catabolic
            process" evidence=ISO] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0055087 "Ski complex" evidence=ISO]
            [GO:0071276 "cellular response to cadmium ion" evidence=IMP]
            [GO:0071585 "detoxification of cadmium ion" evidence=IMP]
            [GO:2000765 "regulation of cytoplasmic translation" evidence=ISO]
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
            InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
            PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 PomBase:SPCC550.03c
            GO:GO:0005829 GO:GO:0005524 GO:GO:0005730 GO:GO:2000765
            EMBL:CU329672 GO:GO:0071276 GO:GO:0071585 GO:GO:0003723
            GO:GO:0006402 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 GO:GO:0003724 eggNOG:COG4581 GO:GO:0055087 PIR:T41378
            RefSeq:NP_588095.1 ProteinModelPortal:O59801 STRING:O59801
            EnsemblFungi:SPCC550.03c.1 GeneID:2538841 KEGG:spo:SPCC550.03c
            HOGENOM:HOG000163048 KO:K12599 OMA:TRLDETC OrthoDB:EOG4WM82R
            NextBio:20800023 Uniprot:O59801
        Length = 1213

 Score = 133 (51.9 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
 Identities = 42/121 (34%), Positives = 64/121 (52%)

Query:  1029 RTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQML 1088
             + +VE LF    ++VL +T T A GVN+PA +V+  GTQ ++    R +  G  +  Q  
Sbjct:   628 KEIVEILFQRGLVKVLFATETFAMGVNMPAKSVVFSGTQKHDGRNFRDLLPG--EYTQCS 685

Query:  1089 GRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMISKLPDMLNAEIVLGTVQNL 1148
             GRAGR   D  G  V+I + SEL    SL +  +   S++IS+     N  + L  V+ L
Sbjct:   686 GRAGRRGLDVTGT-VIILSRSELPDTASLRHMIMGPSSKLISQFRLTYNMILNLLRVETL 744

Query:  1149 K 1149
             +
Sbjct:   745 R 745

 Score = 129 (50.5 bits), Expect = 2.7e-07, Sum P(3) = 2.7e-07
 Identities = 35/111 (31%), Positives = 60/111 (54%)

Query:   921 LLVFVHSRKETGKTARAI--RDMC--LEKDTLGQFLREGSASMEVLRTEADQVKNGELRD 976
             ++VFV S+K   +    +  RD+    EK  +   + +  A ++       Q+  G +R+
Sbjct:   553 VIVFVFSKKRCEEYVDTLTNRDLNNHQEKSEVHVVIEKAVARLKKEDRLLPQI--GRMRE 610

Query:   977 LLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
             +L  G A+HH G+  + + +VE LF    ++VL +T T A GVN+PA +VV
Sbjct:   611 MLSRGLAVHHGGLLPIIKEIVEILFQRGLVKVLFATETFAMGVNMPAKSVV 661

 Score = 82 (33.9 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
 Identities = 27/81 (33%), Positives = 41/81 (50%)

Query:   559 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGL 617
             DE+H ++D ERG V E +I             V L+ LSAT+PN K+ A+ +    +  +
Sbjct:   393 DEVHYVNDLERGVVWEEVIIML-------PPHVTLILLSATVPNTKEFASWVGRTKKKNI 445

Query:   618 FYFDNSFRPVALEQQYIGVTE 638
             +      RPV LE  Y+ V +
Sbjct:   446 YVISTLKRPVPLEH-YLWVKQ 465

 Score = 82 (33.9 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
 Identities = 27/81 (33%), Positives = 41/81 (50%)

Query:   815 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGL 873
             DE+H ++D ERG V E +I             V L+ LSAT+PN K+ A+ +    +  +
Sbjct:   393 DEVHYVNDLERGVVWEEVIIML-------PPHVTLILLSATVPNTKEFASWVGRTKKKNI 445

Query:   874 FYFDNSFRPVALEQQYIGVTE 894
             +      RPV LE  Y+ V +
Sbjct:   446 YVISTLKRPVPLEH-YLWVKQ 465

 Score = 55 (24.4 bits), Expect = 1.0e-07, Sum P(3) = 1.0e-07
 Identities = 26/100 (26%), Positives = 44/100 (44%)

Query:   460 ETLVPIDKLPRYVQHAFEDFK-TLNRIQSRLCKSALESDENLLLCAPTGAGKTNVA--LL 516
             ++  PI+   + V     DF   L+  Q       LE  +++ + A T AGKT VA   +
Sbjct:   258 DSSAPIENFQQLVPEMALDFPFELDNFQKEAIYH-LEMGDSVFVAAHTSAGKTVVAEYAI 316

Query:   517 CMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNF 556
              + Q   KH+           K IY +P+++L  +   +F
Sbjct:   317 ALAQ---KHMT----------KAIYTSPIKALSNQKFRDF 343


>FB|FBgn0035771 [details] [associations]
            symbol:sec63 "sec63" species:7227 "Drosophila melanogaster"
            [GO:0005047 "signal recognition particle binding" evidence=ISS]
            [GO:0005785 "signal recognition particle receptor complex"
            evidence=ISS] [GO:0008565 "protein transporter activity"
            evidence=IEA] [GO:0031204 "posttranslational protein targeting to
            membrane, translocation" evidence=IEA] [GO:0045169 "fusome"
            evidence=IDA] InterPro:IPR027137 InterPro:IPR001623
            InterPro:IPR018253 Pfam:PF00226 GO:GO:0006457 EMBL:AE014296
            Gene3D:1.10.287.110 PRINTS:PR00625 SMART:SM00271 SUPFAM:SSF46565
            PROSITE:PS00636 PROSITE:PS50076 InterPro:IPR004179 Pfam:PF02889
            SMART:SM00611 SMART:SM00973 GO:GO:0045169 HSSP:P08622 CTD:11231
            eggNOG:COG5407 KO:K09540 OMA:TIENCMK PANTHER:PTHR24075
            GeneTree:ENSGT00390000001965 EMBL:BT001562 RefSeq:NP_648111.1
            UniGene:Dm.14937 SMR:Q9VS57 MINT:MINT-762793 STRING:Q9VS57
            EnsemblMetazoa:FBtr0076847 GeneID:38819 KEGG:dme:Dmel_CG8583
            UCSC:CG8583-RA FlyBase:FBgn0035771 InParanoid:Q9VS57
            OrthoDB:EOG48W9H1 GenomeRNAi:38819 NextBio:810541 Uniprot:Q9VS57
        Length = 753

 Score = 154 (59.3 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
 Identities = 31/91 (34%), Positives = 57/91 (62%)

Query:  1589 LDREDEVTGPVIAPFYPQKREEGWWVVIGDPKTNSLLSIK-RLT-LQQKAKIKLDFVAPN 1646
             L+ +  ++  V  P++P++++E WW  I D K+ +LL+    +T L +K +I+L F AP 
Sbjct:   622 LEGKSRLSHTVHCPYFPEEKQEYWWTYICDRKSRTLLTAPYHVTNLVEKEEIQLKFTAPR 681

Query:  1647 -PGHHSYALYFMSDAYLGCDQEYKFSIDVSE 1676
              PG +++ +   SD+YLG DQ+ +  +DV +
Sbjct:   682 WPGVYTFTVCLRSDSYLGMDQQQELKLDVQK 712

 Score = 63 (27.2 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
 Identities = 36/144 (25%), Positives = 63/144 (43%)

Query:   531 TINADEFKIIYVAPMRSLVQEMVGNFGKDEIHLLHDERGPVLEALIARTIRNIEATQEDV 590
             T+  D   ++   P   LVQEMV    +  + + +  R P L ++   TI N       +
Sbjct:   320 TLERDRQFVVKKCPY--LVQEMVSCVHQ-LVMMAYARRVPRLPSI--ETIENCMKMSPMI 374

Query:   591 RLVGLSATLPNYKDVATLLRIKPETGLFYFDNSFRPVALEQQYIGVTEKKALKRFQVMND 650
              + GL      +K     L    E  L YF N  R V   QQ+  +  +++ +  + ++D
Sbjct:   375 -IQGLW----EFKSPLLQLPHLTEDHL-YFMNKKRHVKNLQQFAQLKPEESRQLLKNLSD 428

Query:   651 IVYEKVMEHAGRNQLLVSTLRVEL 674
               YE  M+  G+  L+  ++R E+
Sbjct:   429 FEYENTMKVLGKMPLIDFSIRCEV 452

 Score = 61 (26.5 bits), Expect = 2.0e-07, Sum P(3) = 2.0e-07
 Identities = 12/27 (44%), Positives = 16/27 (59%)

Query:  1491 MEVAQMITQAMWSKDSYLKQLPHFNAD 1517
             M+++ MI Q +W   S L QLPH   D
Sbjct:   368 MKMSPMIIQGLWEFKSPLLQLPHLTED 394

 Score = 58 (25.5 bits), Expect = 4.1e-07, Sum P(3) = 4.1e-07
 Identities = 35/138 (25%), Positives = 59/138 (42%)

Query:   787 TINADEFKIIYVAPMRSLVQEMVGNFGKDEIHLLHDERGPVLEALIARTIRNIEATQEDV 846
             T+  D   ++   P   LVQEMV    +  + + +  R P L ++   TI N       +
Sbjct:   320 TLERDRQFVVKKCPY--LVQEMVSCVHQ-LVMMAYARRVPRLPSI--ETIENCMKMSPMI 374

Query:   847 RLVGLSATLPNYKDVATLLRIKPETGLFYFDNSFRPVALEQQYIGVTEKKALKRFQVMND 906
              + GL      +K     L    E  L YF N  R V   QQ+  +  +++ +  + ++D
Sbjct:   375 -IQGLW----EFKSPLLQLPHLTEDHL-YFMNKKRHVKNLQQFAQLKPEESRQLLKNLSD 428

Query:   907 IVYEKVMEHAGRNQLLVF 924
               YE  M+  G+  L+ F
Sbjct:   429 FEYENTMKVLGKMPLIDF 446

 Score = 52 (23.4 bits), Expect = 1.6e-06, Sum P(3) = 1.6e-06
 Identities = 21/88 (23%), Positives = 41/88 (46%)

Query:  1291 SAKVNILLQAYISQLKLEGFALMSDMVFVTQSAARLMR----AIFEIVL--Y-RGWAQLA 1343
             S K   +L A++S++ L    L  D  FV +    L++     + ++V+  Y R   +L 
Sbjct:   300 SIKARAILHAHLSRMPLNPETLERDRQFVVKKCPYLVQEMVSCVHQLVMMAYARRVPRLP 359

Query:  1344 -----DKALSLCKMVDRRMWQSMSPLRQ 1366
                  +  + +  M+ + +W+  SPL Q
Sbjct:   360 SIETIENCMKMSPMIIQGLWEFKSPLLQ 387

 Score = 44 (20.5 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
 Identities = 14/45 (31%), Positives = 22/45 (48%)

Query:   323 MLKKYRQMILYCTLLASSQSESERQKLRDTMSEDPALAKILRQLD 367
             ML K   M+L  +L    +  S+ Q+ +    E PAL + L  L+
Sbjct:   243 MLLKRALMVLAASLEFDKRHNSQVQERQSDNDEVPALIRQLPNLN 287


>WB|WBGene00008502 [details] [associations]
            symbol:skih-2 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
            anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
            [GO:0016817 "hydrolase activity, acting on acid anhydrides"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG4581 EMBL:Z68341
            HOGENOM:HOG000163048 KO:K12599 OMA:TRLDETC
            GeneTree:ENSGT00690000102154 PIR:T20487 RefSeq:NP_502084.2
            ProteinModelPortal:Q19103 SMR:Q19103 STRING:Q19103 PaxDb:Q19103
            EnsemblMetazoa:F01G4.3 GeneID:178017 KEGG:cel:CELE_F01G4.3
            UCSC:F01G4.3 CTD:178017 WormBase:F01G4.3 InParanoid:Q19103
            NextBio:899374 Uniprot:Q19103
        Length = 1266

 Score = 149 (57.5 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
 Identities = 41/119 (34%), Positives = 64/119 (53%)

Query:   921 LLVFVHSRKETGKTARAIRDMCL----EKDTLGQFLREGSASMEVLRTEADQVKNGELRD 976
             ++VFV SRK   + A+ +  M L    EK  +  F  +    ++    E  QV    +RD
Sbjct:   565 MVVFVFSRKRCDENAQMLASMNLTTEVEKQHVRLFFSQCVQRLKGSDKELPQVLT--MRD 622

Query:   977 LLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV-DRTLVED 1034
             L   GFA+HH+G+  + + +VE LF   ++++L +T T A GVN+PA  VV D  +  D
Sbjct:   623 LCLRGFAVHHSGILPILKEVVELLFQKGYVKILFATETFAMGVNMPARCVVFDSIMKHD 681

 Score = 71 (30.1 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
 Identities = 30/94 (31%), Positives = 47/94 (50%)

Query:   559 DEIHLLH-DERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLL-RIKPETG 616
             DE+H ++ +ERG V E ++      + A    V++V LSAT+PN  + A  + RIK    
Sbjct:   405 DEVHYINNEERGHVWEEVLIM----LPA---HVKIVMLSATVPNCVEFADWVGRIKNRK- 456

Query:   617 LFYFDNSFRPVALEQ-QYIGVTEKKALKRFQVMN 649
             +       RPV LE   Y G   K     F++++
Sbjct:   457 INVISTDRRPVPLEHFLYTGQDGKTQKDLFKIID 490

 Score = 71 (30.1 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
 Identities = 30/94 (31%), Positives = 47/94 (50%)

Query:   815 DEIHLLH-DERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLL-RIKPETG 872
             DE+H ++ +ERG V E ++      + A    V++V LSAT+PN  + A  + RIK    
Sbjct:   405 DEVHYINNEERGHVWEEVLIM----LPA---HVKIVMLSATVPNCVEFADWVGRIKNRK- 456

Query:   873 LFYFDNSFRPVALEQ-QYIGVTEKKALKRFQVMN 905
             +       RPV LE   Y G   K     F++++
Sbjct:   457 INVISTDRRPVPLEHFLYTGQDGKTQKDLFKIID 490

 Score = 49 (22.3 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
 Identities = 14/28 (50%), Positives = 17/28 (60%)

Query:   487 SRLCKSALESDENLLLCAPTGAGKTNVA 514
             S LC   +E  E+L + A T AGKT VA
Sbjct:   300 SVLC---MERGESLFVAAHTSAGKTVVA 324

 Score = 39 (18.8 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
 Identities = 15/61 (24%), Positives = 27/61 (44%)

Query:   601 NYKDVATLLRIKPETGLFYFDN--SFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVME 658
             ++KD ATLL   P  G     N  S +  A   + I + E   +  F +++ +   + + 
Sbjct:   146 SFKDDATLLNTIPTIGQIVLPNHSSVKKPAETPKSINIEE---MDMFDLLDMVTSNEYII 202

Query:   659 H 659
             H
Sbjct:   203 H 203

 Score = 39 (18.8 bits), Expect = 0.00022, Sum P(2) = 0.00022
 Identities = 15/61 (24%), Positives = 27/61 (44%)

Query:   857 NYKDVATLLRIKPETGLFYFDN--SFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVME 914
             ++KD ATLL   P  G     N  S +  A   + I + E   +  F +++ +   + + 
Sbjct:   146 SFKDDATLLNTIPTIGQIVLPNHSSVKKPAETPKSINIEE---MDMFDLLDMVTSNEYII 202

Query:   915 H 915
             H
Sbjct:   203 H 203


>FB|FBgn0002899 [details] [associations]
            symbol:mus301 "mutagen-sensitive 301" species:7227
            "Drosophila melanogaster" [GO:0007294 "germarium-derived oocyte
            fate determination" evidence=IGI;IMP] [GO:0008298 "intracellular
            mRNA localization" evidence=IMP;TAS] [GO:0048477 "oogenesis"
            evidence=IGI;TAS] [GO:0009949 "polarity specification of
            anterior/posterior axis" evidence=IMP] [GO:0030717 "karyosome
            formation" evidence=IMP] [GO:0009951 "polarity specification of
            dorsal/ventral axis" evidence=IMP] [GO:0006417 "regulation of
            translation" evidence=TAS] [GO:0030532 "small nuclear
            ribonucleoprotein complex" evidence=ISS] [GO:0005682 "U5 snRNP"
            evidence=ISS] [GO:0004386 "helicase activity" evidence=ISS]
            [GO:0009994 "oocyte differentiation" evidence=NAS] [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0016321 "female meiosis chromosome segregation"
            evidence=IMP] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0009949 GO:GO:0007294 EMBL:AE014296 GO:GO:0006417
            GO:GO:0006200 GO:GO:0003676 GO:GO:0004386 GO:GO:0008298
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1204
            GeneTree:ENSGT00640000091272 GO:GO:0030717 GO:GO:0016321
            GO:GO:0008026 OMA:SRPLENC GO:GO:0009951 EMBL:BT011090
            RefSeq:NP_648178.1 UniGene:Dm.15493 SMR:Q9VSE2 IntAct:Q9VSE2
            STRING:Q9VSE2 EnsemblMetazoa:FBtr0076689 GeneID:38905
            KEGG:dme:Dmel_CG7972 UCSC:CG7972-RA CTD:38905 FlyBase:FBgn0002899
            InParanoid:Q9VSE2 OrthoDB:EOG4MKKXB GenomeRNAi:38905 NextBio:810944
            Uniprot:Q9VSE2
        Length = 1051

 Score = 152 (58.6 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
 Identities = 62/235 (26%), Positives = 106/235 (45%)

Query:   815 DEIHLLHDE-RGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGL 873
             DE+HL+ ++ RG  LEA + + +  + A   ++++VG+SAT+ N  ++++ L     T  
Sbjct:   391 DELHLIGEKGRGATLEAFLTK-VMFLNA---NIQIVGMSATIGNLSEISSFLNADVYTRG 446

Query:   874 F-------YFD--------NS----FRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVME 914
             F       Y          NS       + +  + +     +A+KR     D +   + E
Sbjct:   447 FRPVELKEYIKCGPDLLEINSAGQTLEEIFVPSRSVEYNYSEAVKRADP--DHLAGLISE 504

Query:   915 HAGRNQLLVFVHSRKETGKTARAIRDMCLEKDTLGQFLREGSASMEVLRTEADQVKNGEL 974
              A  +  LVF  SRK     A  +  + + K    +  R     +     +   + +  L
Sbjct:   505 CAPEHCCLVFCPSRKNCENVALLLSRI-VPKHKFFEHRRSEKLDLMDALDKMCGILSPVL 563

Query:   975 RDLLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVVDR 1029
                LPYG A HH+G+T  +R  +E  +    + V+  T+TLA GVNLPA  V+ R
Sbjct:   564 AKTLPYGIAYHHSGLTTDERKYIETAYRFGVVTVICCTSTLAAGVNLPAKRVIIR 618

 Score = 104 (41.7 bits), Expect = 8.7e-07, Sum P(4) = 8.7e-07
 Identities = 35/103 (33%), Positives = 49/103 (47%)

Query:  1010 VSTATLAWGV--NLPAHTVVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQ 1067
             V   TL +G+  +    T  +R  +E  +    + V+  T+TLA GVNLPA  VII+   
Sbjct:   562 VLAKTLPYGIAYHHSGLTTDERKYIETAYRFGVVTVICCTSTLAAGVNLPAKRVIIRA-- 619

Query:  1068 IYNPEKGRWVELGALDVLQMLGRAGRPQYDTKGEGVLITNHSE 1110
                P  G+   L      QM+GRAGR      GE +LI    +
Sbjct:   620 ---PYVGQEF-LTLCKYKQMVGRAGRAGLGEAGESILIAQSKD 658

 Score = 87 (35.7 bits), Expect = 8.7e-07, Sum P(4) = 8.7e-07
 Identities = 25/77 (32%), Positives = 45/77 (58%)

Query:   559 DEIHLLHDE-RGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGL 617
             DE+HL+ ++ RG  LEA + + +  + A   ++++VG+SAT+ N  ++++ L     T  
Sbjct:   391 DELHLIGEKGRGATLEAFLTK-VMFLNA---NIQIVGMSATIGNLSEISSFLNADVYT-- 444

Query:   618 FYFDNSFRPVALEQQYI 634
                   FRPV L++ YI
Sbjct:   445 ----RGFRPVELKE-YI 456

 Score = 70 (29.7 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
 Identities = 27/90 (30%), Positives = 42/90 (46%)

Query:   468 LPRYVQHAFEDFKTLNRI---QSR-LCKSALESDENLLLCAPTGAGKTNVALLCMLQEIG 523
             LP  V+    + K +N +   Q   L   A+   +NL+   PT  GKT VA + ML+E+ 
Sbjct:   247 LPDKVKKMILEHKGINSLYEWQDECLNLPAIRQRKNLIYALPTSGGKTLVAEILMLREL- 305

Query:   524 KHINADGTINADEFKIIYVAPMRSLVQEMV 553
                         E  ++++ P  S+VQE V
Sbjct:   306 ---------LCRERNVLFILPYVSIVQEKV 326

 Score = 54 (24.1 bits), Expect = 3.0e-05, Sum P(4) = 3.0e-05
 Identities = 17/52 (32%), Positives = 26/52 (50%)

Query:   758 FRLPRGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMV 809
             + LP   GKT VA + ML+E+             E  ++++ P  S+VQE V
Sbjct:   285 YALPTSGGKTLVAEILMLREL----------LCRERNVLFILPYVSIVQEKV 326

 Score = 44 (20.5 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
 Identities = 13/37 (35%), Positives = 18/37 (48%)

Query:  1292 AKVNILLQAYISQLKLEGFALMSDMVFVTQSAARLMR 1328
             A  +IL   Y S L L+  A+   + F    AARL +
Sbjct:   843 ADASILFGVYTS-LPLDSQAMFKQLGFTEAHAARLFK 878

 Score = 37 (18.1 bits), Expect = 3.0e-05, Sum P(4) = 3.0e-05
 Identities = 8/21 (38%), Positives = 12/21 (57%)

Query:   645 FQVMNDIVYEKVMEHAGRNQL 665
             F  + D V + ++EH G N L
Sbjct:   244 FYGLPDKVKKMILEHKGINSL 264


>WB|WBGene00012342 [details] [associations]
            symbol:mtr-4 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
            anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
            [GO:0016817 "hydrolase activity, acting on acid anhydrides"
            evidence=IEA] [GO:0040010 "positive regulation of growth rate"
            evidence=IMP] [GO:0009792 "embryo development ending in birth or
            egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
            [GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
            "reproduction" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
            [GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
            [GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
            [GO:0042127 "regulation of cell proliferation" evidence=IMP]
            [GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0040022
            "feminization of hermaphroditic germ-line" evidence=IMP]
            [GO:0007281 "germ cell development" evidence=IMP]
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
            InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
            PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
            GO:GO:0040010 GO:GO:0002119 GO:GO:0040011 InterPro:IPR018247
            GO:GO:0003676 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281
            GO:GO:0040020 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0040022 GO:GO:0008026 eggNOG:COG4581 EMBL:Z70271 PIR:T26282
            RefSeq:NP_501757.1 ProteinModelPortal:Q23223 SMR:Q23223
            MINT:MINT-6670291 STRING:Q23223 PaxDb:Q23223 EnsemblMetazoa:W08D2.7
            GeneID:177824 KEGG:cel:CELE_W08D2.7 CTD:177824 WormBase:W08D2.7
            GeneTree:ENSGT00690000102230 HOGENOM:HOG000163047 InParanoid:Q23223
            KO:K12598 OMA:ENFQKAM NextBio:898538 InterPro:IPR025696
            Pfam:PF13234 Uniprot:Q23223
        Length = 1026

 Score = 141 (54.7 bits), Expect = 3.5e-07, Sum P(4) = 3.5e-07
 Identities = 38/123 (30%), Positives = 64/123 (52%)

Query:   908 VYEKVMEHAGRNQLLVFVHSRKETGKTARAIRDMCLEKDTLGQFLREGSASMEVLRTEAD 967
             +   V  + G N  +VF  SRKE    A +++DM   KD     ++    S     +  D
Sbjct:   364 IIRSVASNDGLN-CIVFSFSRKECESYAISLKDMDFNKDHEKGMVKSVYESAIAQLSPED 422

Query:   968 QVKNGELRDLLPY---GFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAH 1024
             Q K  ++ ++LP    G  +HH+G+  + +  +E LF +  ++VL +T T + G+N+PA 
Sbjct:   423 Q-KLPQILNILPLLRRGIGVHHSGLMPILKETIEILFGEGLVKVLFATETFSMGLNMPAR 481

Query:  1025 TVV 1027
             TVV
Sbjct:   482 TVV 484

 Score = 123 (48.4 bits), Expect = 2.3e-05, Sum P(4) = 2.3e-05
 Identities = 35/128 (27%), Positives = 66/128 (51%)

Query:   985 HHAGMTR-VDRTLVEDLFA-DRHI-QVLVSTATLAWGVNLPAHTVVD--RTLVEDLFADR 1039
             H  GM + V  + +  L   D+ + Q+L     L  G+ +    ++   +  +E LF + 
Sbjct:   402 HEKGMVKSVYESAIAQLSPEDQKLPQILNILPLLRRGIGVHHSGLMPILKETIEILFGEG 461

Query:  1040 HIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQMLGRAGRPQYDTK 1099
              ++VL +T T + G+N+PA TV+    + ++    R++  G  + +QM GRAGR   D +
Sbjct:   462 LVKVLFATETFSMGLNMPARTVVFTSARKFDGSDNRYITSG--EYIQMAGRAGRRGKDDR 519

Query:  1100 GEGVLITN 1107
             G  +L+ +
Sbjct:   520 GTVILMVD 527

 Score = 78 (32.5 bits), Expect = 3.5e-07, Sum P(4) = 3.5e-07
 Identities = 36/121 (29%), Positives = 58/121 (47%)

Query:   776 QEIGKHINADGTINADEFKIIYVAP-MRSLV---QEMVGNFG---KDEIHLLHD-ERGPV 827
             +++G  +  D T+N D   ++     +RS++    E++   G    DEIH + D ERG V
Sbjct:   193 KDVGL-MTGDVTLNPDASCLVMTTEILRSMLYRGSEIMKEVGWVVYDEIHYMRDKERGVV 251

Query:   828 LEALIARTIRNIEATQEDVRLVGLSATLPNYKDVAT-LLRIKPE-TGLFYFDNSFRPVAL 885
              E  I    +NI+          LSAT+PN +  A  +  IK +   + Y D  +RP  L
Sbjct:   252 WEETIILMSKNIKQAF-------LSATIPNARQFAQWVASIKQQPVNVVYTD--YRPTPL 302

Query:   886 E 886
             +
Sbjct:   303 Q 303

 Score = 78 (32.5 bits), Expect = 6.4e-06, Sum P(4) = 6.4e-06
 Identities = 36/121 (29%), Positives = 58/121 (47%)

Query:   520 QEIGKHINADGTINADEFKIIYVAP-MRSLV---QEMVGNFG---KDEIHLLHD-ERGPV 571
             +++G  +  D T+N D   ++     +RS++    E++   G    DEIH + D ERG V
Sbjct:   193 KDVGL-MTGDVTLNPDASCLVMTTEILRSMLYRGSEIMKEVGWVVYDEIHYMRDKERGVV 251

Query:   572 LEALIARTIRNIEATQEDVRLVGLSATLPNYKDVAT-LLRIKPE-TGLFYFDNSFRPVAL 629
              E  I    +NI+          LSAT+PN +  A  +  IK +   + Y D  +RP  L
Sbjct:   252 WEETIILMSKNIKQAF-------LSATIPNARQFAQWVASIKQQPVNVVYTD--YRPTPL 302

Query:   630 E 630
             +
Sbjct:   303 Q 303

 Score = 51 (23.0 bits), Expect = 3.5e-07, Sum P(4) = 3.5e-07
 Identities = 18/63 (28%), Positives = 36/63 (57%)

Query:   486 QSRLCKSALESDENLLLCAPTGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPM 545
             Q+ LC   +++++++L+ A T AGKT VA       I K +        ++ ++IY +P+
Sbjct:   132 QAILC---IDNNQSVLVSAHTSAGKTVVATYA----IAKCLR-------EKQRVIYTSPI 177

Query:   546 RSL 548
             ++L
Sbjct:   178 KAL 180

 Score = 38 (18.4 bits), Expect = 6.4e-06, Sum P(4) = 6.4e-06
 Identities = 13/41 (31%), Positives = 19/41 (46%)

Query:    51 RMGDRFMRTKPIKAEERKVKRQKRDEAQYDFTRMKGATLLS 91
             R   R + T PIKA   +  R+  +E + D   M G   L+
Sbjct:   166 REKQRVIYTSPIKALSNQKYRELEEEFK-DVGLMTGDVTLN 205

 Score = 37 (18.1 bits), Expect = 3.5e-07, Sum P(4) = 3.5e-07
 Identities = 7/30 (23%), Positives = 18/30 (60%)

Query:  1283 IKESTDEPSAKVNILLQAYISQLKLEGFAL 1312
             IK +TD  +++  +     ++ +++EG A+
Sbjct:   539 IKGATDPLNSQFRLTYNMVLNLMRVEGMAV 568


>SGD|S000004390 [details] [associations]
            symbol:SKI2 "Ski complex component and putative RNA helicase"
            species:4932 "Saccharomyces cerevisiae" [GO:0003724 "RNA helicase
            activity" evidence=ISS] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
            acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0070478
            "nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic
            nonsense-mediated decay" evidence=IGI;IMP] [GO:0016817 "hydrolase
            activity, acting on acid anhydrides" evidence=IEA] [GO:0055087 "Ski
            complex" evidence=IDA;IPI] [GO:0034427 "nuclear-transcribed mRNA
            catabolic process, exonucleolytic, 3'-5'" evidence=IMP] [GO:0070481
            "nuclear-transcribed mRNA catabolic process, non-stop decay"
            evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0006417 "regulation of translation" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0051607 "defense
            response to virus" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
            PROSITE:PS51194 SMART:SM00490 SGD:S000004390 GO:GO:0005524
            GO:GO:0006417 GO:GO:0003677 EMBL:BK006945 GO:GO:0051607
            GO:GO:0003723 EMBL:U19729 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 EMBL:Z18944 EMBL:L13469 GO:GO:0008026 GO:GO:0003724
            GO:GO:0070478 GO:GO:0070481 eggNOG:COG4581 KO:K05544
            RefSeq:NP_013505.4 GeneID:851117 KEGG:sce:YLR401C
            InterPro:IPR025696 Pfam:PF13234 GO:GO:0055087 HOGENOM:HOG000163048
            KO:K12599 OMA:TRLDETC OrthoDB:EOG4WM82R PIR:S55954
            RefSeq:NP_013502.3 PDB:4A4K PDB:4A4Z PDBsum:4A4K PDBsum:4A4Z
            ProteinModelPortal:P35207 SMR:P35207 DIP:DIP-5887N IntAct:P35207
            MINT:MINT-662639 STRING:P35207 PaxDb:P35207 PeptideAtlas:P35207
            EnsemblFungi:YLR398C GeneID:851114 KEGG:sce:YLR398C CYGD:YLR398c
            GeneTree:ENSGT00690000102154 NextBio:967830 Genevestigator:P35207
            GermOnline:YLR398C Uniprot:P35207
        Length = 1287

 Score = 138 (53.6 bits), Expect = 3.9e-07, Sum P(3) = 3.9e-07
 Identities = 37/126 (29%), Positives = 66/126 (52%)

Query:   909 YEKVMEHAGRNQLL---VFVHSRKETGKTARAIR--DMC--LEKDTLGQFLREGSASMEV 961
             + +++ +  + +LL   VFV S+K   + A  +   + C   EK  +  F+ +    ++ 
Sbjct:   614 WPEIVNYLRKRELLPMVVFVFSKKRCEEYADWLEGINFCNNKEKSQIHMFIEKSITRLKK 673

Query:   962 LRTEADQVKNGELRDLLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNL 1021
                +  Q+   + R LL  G A+HH G+  + + L+E LF+   I+VL +T T A G+NL
Sbjct:   674 EDRDLPQIL--KTRSLLERGIAVHHGGLLPIVKELIEILFSKGFIKVLFATETFAMGLNL 731

Query:  1022 PAHTVV 1027
             P  TV+
Sbjct:   732 PTRTVI 737

 Score = 119 (46.9 bits), Expect = 3.4e-05, Sum P(3) = 3.4e-05
 Identities = 37/112 (33%), Positives = 60/112 (53%)

Query:  1003 DRHI-QVLVSTATLAWGVNLPAHTVVD--RTLVEDLFADRHIQVLVSTATLAWGVNLPAH 1059
             DR + Q+L + + L  G+ +    ++   + L+E LF+   I+VL +T T A G+NLP  
Sbjct:   675 DRDLPQILKTRSLLERGIAVHHGGLLPIVKELIEILFSKGFIKVLFATETFAMGLNLPTR 734

Query:  1060 TVIIKGTQIYNPEKGRWVELGALDVLQMLGRAGRPQYDTKGEGVLITNHSEL 1111
             TVI    + ++    R  EL   +  QM GRAGR   D+ G  +++  +S L
Sbjct:   735 TVIFSSIRKHDGNGLR--ELTPGEFTQMAGRAGRRGLDSTGTVIVMAYNSPL 784

 Score = 78 (32.5 bits), Expect = 3.9e-07, Sum P(3) = 3.9e-07
 Identities = 28/85 (32%), Positives = 42/85 (49%)

Query:   559 DEIHLLHDE-RGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGL 617
             DE+H ++D+ RG V E +I      I   Q  V+ + LSAT+PN  + A  +    +  +
Sbjct:   444 DEVHYVNDQDRGVVWEEVI------IMLPQH-VKFILLSATVPNTYEFANWIGRTKQKNI 496

Query:   618 FYFDNSFRPVALEQQYIGVTEKKAL 642
             +      RPV LE   I +  KK L
Sbjct:   497 YVISTPKRPVPLE---INIWAKKEL 518

 Score = 78 (32.5 bits), Expect = 3.9e-07, Sum P(3) = 3.9e-07
 Identities = 28/85 (32%), Positives = 42/85 (49%)

Query:   815 DEIHLLHDE-RGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGL 873
             DE+H ++D+ RG V E +I      I   Q  V+ + LSAT+PN  + A  +    +  +
Sbjct:   444 DEVHYVNDQDRGVVWEEVI------IMLPQH-VKFILLSATVPNTYEFANWIGRTKQKNI 496

Query:   874 FYFDNSFRPVALEQQYIGVTEKKAL 898
             +      RPV LE   I +  KK L
Sbjct:   497 YVISTPKRPVPLE---INIWAKKEL 518

 Score = 49 (22.3 bits), Expect = 3.9e-07, Sum P(3) = 3.9e-07
 Identities = 19/72 (26%), Positives = 35/72 (48%)

Query:   494 LESDENLLLCAPTGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMV 553
             LE  +++ + A T AGKT VA   +      H N          K IY +P+++L  +  
Sbjct:   341 LEQGDSVFVAAHTSAGKTVVAEYAIAMA---HRNMT--------KTIYTSPIKALSNQKF 389

Query:   554 GNFGK--DEIHL 563
              +F +  D++++
Sbjct:   390 RDFKETFDDVNI 401


>FB|FBgn0001986 [details] [associations]
            symbol:l(2)35Df "lethal (2) 35Df" species:7227 "Drosophila
            melanogaster" [GO:0004004 "ATP-dependent RNA helicase activity"
            evidence=ISS] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
            2 spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
            spliceosome" evidence=IC] [GO:0022008 "neurogenesis" evidence=IMP]
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
            InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
            PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            EMBL:AE014134 GO:GO:0022008 GO:GO:0003676 GO:GO:0000398
            GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0004004 eggNOG:COG4581 GeneTree:ENSGT00690000102230 KO:K12598
            OMA:ENFQKAM InterPro:IPR025696 Pfam:PF13234 EMBL:AF145638
            RefSeq:NP_524929.1 UniGene:Dm.1748 SMR:Q9Y134 MINT:MINT-942655
            STRING:Q9Y134 EnsemblMetazoa:FBtr0080760 GeneID:48782
            KEGG:dme:Dmel_CG4152 UCSC:CG4152-RA FlyBase:FBgn0001986
            InParanoid:Q9Y134 OrthoDB:EOG4K3JB5 GenomeRNAi:48782 NextBio:839548
            Uniprot:Q9Y134
        Length = 1055

 Score = 134 (52.2 bits), Expect = 5.2e-07, Sum P(3) = 5.2e-07
 Identities = 29/74 (39%), Positives = 45/74 (60%)

Query:  1032 VEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQMLGRA 1091
             +E LF +  I+ L +T T A G+N+PA TV+    + ++ +K RW+  G  + +QM GRA
Sbjct:   483 IEILFGEGLIKALFATETFAMGLNMPARTVLFTAPRKFDGKKFRWISSG--EYIQMAGRA 540

Query:  1092 GRPQYDTKGEGVLI 1105
             GR   D KG  +L+
Sbjct:   541 GRRGLDDKGIVILM 554

 Score = 113 (44.8 bits), Expect = 7.2e-05, Sum P(3) = 7.2e-05
 Identities = 30/74 (40%), Positives = 44/74 (59%)

Query:   958 SMEVLRTEAD----QVKNGELRDLLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTA 1013
             +M+VL TE D    QV+N  +  LL  G  IHH G+  + +  +E LF +  I+ L +T 
Sbjct:   443 AMDVL-TEEDRRLPQVEN--VLPLLRRGIGIHHGGLLPILKETIEILFGEGLIKALFATE 499

Query:  1014 TLAWGVNLPAHTVV 1027
             T A G+N+PA TV+
Sbjct:   500 TFAMGLNMPARTVL 513

 Score = 74 (31.1 bits), Expect = 5.2e-07, Sum P(3) = 5.2e-07
 Identities = 38/125 (30%), Positives = 59/125 (47%)

Query:   776 QEIGKHINADGTINADEFKIIYVAP-MRSLV---QEMVGNFGK---DEIHLLHD-ERGPV 827
             +++G  +  D TIN     +I     +R+++    E++   G    DEIH + D ERG V
Sbjct:   219 KDVGL-VTGDVTINPSASCLIMTTEILRNMLYRGSEIMREVGWVVFDEIHYMRDKERGVV 277

Query:   828 LEALIARTIRNIEATQEDVRLVGLSATLPNYKDVAT-LLRI-KPETGLFYFDNSFRPVAL 885
              E  +           ++VR V LSAT+PN +  A  +  + K    + Y D  +RP  L
Sbjct:   278 WEETLI-------LLPDNVRYVFLSATIPNARQFAEWVCHLHKQPCHVVYTD--YRPTPL 328

Query:   886 EQQYI 890
              Q YI
Sbjct:   329 -QHYI 332

 Score = 74 (31.1 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
 Identities = 38/125 (30%), Positives = 59/125 (47%)

Query:   520 QEIGKHINADGTINADEFKIIYVAP-MRSLV---QEMVGNFGK---DEIHLLHD-ERGPV 571
             +++G  +  D TIN     +I     +R+++    E++   G    DEIH + D ERG V
Sbjct:   219 KDVGL-VTGDVTINPSASCLIMTTEILRNMLYRGSEIMREVGWVVFDEIHYMRDKERGVV 277

Query:   572 LEALIARTIRNIEATQEDVRLVGLSATLPNYKDVAT-LLRI-KPETGLFYFDNSFRPVAL 629
              E  +           ++VR V LSAT+PN +  A  +  + K    + Y D  +RP  L
Sbjct:   278 WEETLI-------LLPDNVRYVFLSATIPNARQFAEWVCHLHKQPCHVVYTD--YRPTPL 328

Query:   630 EQQYI 634
              Q YI
Sbjct:   329 -QHYI 332

 Score = 53 (23.7 bits), Expect = 5.2e-07, Sum P(3) = 5.2e-07
 Identities = 23/103 (22%), Positives = 46/103 (44%)

Query:   458 PDETLVPIDKLPRYVQHAFEDFKTLNRIQSRLCKSALESDENLLLCAPTGAGKTNVALLC 517
             PD+  +P+          +       + Q+ LC   +++ +++L+ A T AGKT VA   
Sbjct:   130 PDQEYIPLKPFSGVPAKEYPFVLDPFQRQAILC---IDNSQSVLVSAHTSAGKTVVAEYA 186

Query:   518 MLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNFGKDE 560
             + + +           A + ++IY  P+++L  +    F  DE
Sbjct:   187 IAKSL-----------AAKQRVIYTTPIKALSNQKFREF-TDE 217

 Score = 47 (21.6 bits), Expect = 0.00024, Sum P(3) = 0.00024
 Identities = 11/35 (31%), Positives = 18/35 (51%)

Query:   795 IIYVAPMRSLVQEMVGNFGKDEIHLLHDERGPVLE 829
             ++Y     + +Q  +   G D IHL+ DE+G   E
Sbjct:   318 VVYTDYRPTPLQHYIFPAGGDGIHLIVDEKGQFKE 352


>MGI|MGI:1919448 [details] [associations]
            symbol:Skiv2l2 "superkiller viralicidic activity 2-like 2
            (S. cerevisiae)" species:10090 "Mus musculus" [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0000460 "maturation of 5.8S
            rRNA" evidence=ISO] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
            [GO:0006364 "rRNA processing" evidence=IEA] [GO:0006397 "mRNA
            processing" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016817
            "hydrolase activity, acting on acid anhydrides" evidence=IEA]
            [GO:0016818 "hydrolase activity, acting on acid anhydrides, in
            phosphorus-containing anhydrides" evidence=IEA] [GO:0071013
            "catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
            PROSITE:PS51194 SMART:SM00490 MGI:MGI:1919448 GO:GO:0005524
            GO:GO:0005730 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
            GO:GO:0000178 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0000460 GO:GO:0008026 eggNOG:COG4581
            GeneTree:ENSGT00690000102230 HOGENOM:HOG000163047 KO:K12598
            OMA:ENFQKAM InterPro:IPR025696 Pfam:PF13234 CTD:23517
            HOVERGEN:HBG104255 OrthoDB:EOG4D52WW ChiTaRS:SKIV2L2 EMBL:AK012158
            EMBL:BC029230 IPI:IPI00113134 RefSeq:NP_082427.1 UniGene:Mm.291029
            ProteinModelPortal:Q9CZU3 SMR:Q9CZU3 IntAct:Q9CZU3 STRING:Q9CZU3
            PhosphoSite:Q9CZU3 PaxDb:Q9CZU3 PRIDE:Q9CZU3
            Ensembl:ENSMUST00000022281 GeneID:72198 KEGG:mmu:72198
            UCSC:uc007rws.1 InParanoid:Q9CZU3 NextBio:335677 Bgee:Q9CZU3
            Genevestigator:Q9CZU3 GermOnline:ENSMUSG00000016018 Uniprot:Q9CZU3
        Length = 1040

 Score = 133 (51.9 bits), Expect = 6.3e-07, Sum P(4) = 6.3e-07
 Identities = 28/76 (36%), Positives = 46/76 (60%)

Query:  1032 VEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQMLGRA 1091
             +E LF++  I+ L +T T A G+N+PA TV+    + Y+ +  RW+  G  + +QM GRA
Sbjct:   465 IEILFSEGLIKALFATETFAMGINMPARTVLFTNARKYDGKDFRWISSG--EYIQMSGRA 522

Query:  1092 GRPQYDTKGEGVLITN 1107
             GR   D +G  +L+ +
Sbjct:   523 GRRGMDDRGIVILMVD 538

 Score = 116 (45.9 bits), Expect = 3.2e-05, Sum P(4) = 3.2e-05
 Identities = 32/122 (26%), Positives = 62/122 (50%)

Query:   908 VYEKVMEHAGRNQLLVFVHSRKETGKTARAIRDMCLEKDTLGQFLREG-SASMEVLRTEA 966
             + + +ME      +++F  S+K+    A  +  +    D   + + E  + +++ L  E 
Sbjct:   375 IVKMIMER-NFQPVIIFSFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFNNAIDCLSDED 433

Query:   967 DQVKNGE-LRDLLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHT 1025
              ++   E +  LL  G  IHH G+  + +  +E LF++  I+ L +T T A G+N+PA T
Sbjct:   434 KKLPQVEHVLPLLKRGIGIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPART 493

Query:  1026 VV 1027
             V+
Sbjct:   494 VL 495

 Score = 71 (30.1 bits), Expect = 6.3e-07, Sum P(4) = 6.3e-07
 Identities = 29/79 (36%), Positives = 38/79 (48%)

Query:   559 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVAT-LLRI-KPET 615
             DEIH + D ERG V E  I           ++V  V LSAT+PN +  A  +  + K   
Sbjct:   250 DEIHYMRDSERGVVWEETII-------LLPDNVHYVFLSATIPNARQFAEWICHLHKQPC 302

Query:   616 GLFYFDNSFRPVALEQQYI 634
              + Y D  +RP  L Q YI
Sbjct:   303 HVIYTD--YRPTPL-QHYI 318

 Score = 71 (30.1 bits), Expect = 6.3e-07, Sum P(4) = 6.3e-07
 Identities = 29/79 (36%), Positives = 38/79 (48%)

Query:   815 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVAT-LLRI-KPET 871
             DEIH + D ERG V E  I           ++V  V LSAT+PN +  A  +  + K   
Sbjct:   250 DEIHYMRDSERGVVWEETII-------LLPDNVHYVFLSATIPNARQFAEWICHLHKQPC 302

Query:   872 GLFYFDNSFRPVALEQQYI 890
              + Y D  +RP  L Q YI
Sbjct:   303 HVIYTD--YRPTPL-QHYI 318

 Score = 51 (23.0 bits), Expect = 6.3e-07, Sum P(4) = 6.3e-07
 Identities = 16/45 (35%), Positives = 24/45 (53%)

Query:  1401 RVPKLGKTIHKYVHQFPKLELATHIQPITRSTLRVELTISPDFQW 1445
             ++ KLGK I +Y+H+ PK  L   +QP     ++ E     DF W
Sbjct:   630 QLAKLGKEIEEYIHK-PKYCLP-FLQPGRLVKVKNE---GDDFGW 669

 Score = 50 (22.7 bits), Expect = 6.3e-07, Sum P(4) = 6.3e-07
 Identities = 17/53 (32%), Positives = 29/53 (54%)

Query:   459 DETLVPIDKLPRYVQHAFEDFKTLNRIQSRLCKSALESDENLLLCAPTGAGKT 511
             DE  +P+   PR  + A E    L+  Q R     +++++++L+ A T AGKT
Sbjct:   117 DEDYIPLK--PRVGKAAKEYPFILDAFQ-REAIQCVDNNQSVLVSAHTSAGKT 166

 Score = 43 (20.2 bits), Expect = 0.00031, Sum P(4) = 0.00031
 Identities = 11/35 (31%), Positives = 17/35 (48%)

Query:   539 IIYVAPMRSLVQEMVGNFGKDEIHLLHDERGPVLE 573
             +IY     + +Q  +   G D +HL+ DE G   E
Sbjct:   304 VIYTDYRPTPLQHYIFPAGGDGLHLVVDENGDFRE 338

 Score = 43 (20.2 bits), Expect = 0.00031, Sum P(4) = 0.00031
 Identities = 11/35 (31%), Positives = 17/35 (48%)

Query:   795 IIYVAPMRSLVQEMVGNFGKDEIHLLHDERGPVLE 829
             +IY     + +Q  +   G D +HL+ DE G   E
Sbjct:   304 VIYTDYRPTPLQHYIFPAGGDGLHLVVDENGDFRE 338

 Score = 40 (19.1 bits), Expect = 5.9e-06, Sum P(4) = 5.9e-06
 Identities = 15/47 (31%), Positives = 20/47 (42%)

Query:    40 VCSLVGKLEGTRMGDRFMRTKPIKAEERKVKRQKRDEAQYDFTRMKG 86
             VC+        R   R + T PIKA   +  R+  +E Q D   M G
Sbjct:   167 VCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQ-DVGLMTG 212


>CGD|CAL0003794 [details] [associations]
            symbol:orf19.1335 species:5476 "Candida albicans" [GO:0008143
            "poly(A) RNA binding" evidence=IEA] [GO:0034459 "ATP-dependent
            3'-5' RNA helicase activity" evidence=IEA] [GO:0005730 "nucleolus"
            evidence=IEA] [GO:0031499 "TRAMP complex" evidence=IEA] [GO:0034476
            "U5 snRNA 3'-end processing" evidence=IEA] [GO:0071049 "nuclear
            retention of pre-mRNA with aberrant 3'-ends at the site of
            transcription" evidence=IEA] [GO:0000467 "exonucleolytic trimming
            to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA
            transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
            [GO:0071035 "nuclear polyadenylation-dependent rRNA catabolic
            process" evidence=IEA] [GO:0043629 "ncRNA polyadenylation"
            evidence=IEA] [GO:0071051 "polyadenylation-dependent snoRNA 3'-end
            processing" evidence=IEA] [GO:0071042 "nuclear
            polyadenylation-dependent mRNA catabolic process" evidence=IEA]
            [GO:0071038 "nuclear polyadenylation-dependent tRNA catabolic
            process" evidence=IEA] [GO:0034475 "U4 snRNA 3'-end processing"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
            CGD:CAL0003794 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG4581
            EMBL:AACQ01000188 EMBL:AACQ01000187 KO:K12598 InterPro:IPR025696
            Pfam:PF13234 RefSeq:XP_711657.1 RefSeq:XP_711675.1
            RefSeq:XP_888948.1 STRING:Q59PN6 GeneID:3646717 GeneID:3646739
            GeneID:3703907 KEGG:cal:CaO19.1335 KEGG:cal:CaO19.8915
            KEGG:cal:CaO19_1335 Uniprot:Q59PN6
        Length = 1106

 Score = 127 (49.8 bits), Expect = 8.0e-07, Sum P(3) = 8.0e-07
 Identities = 33/113 (29%), Positives = 59/113 (52%)

Query:   919 NQLLVFVHSRKETGKTARAIRDMCL----EKDTLGQFLREGSASMEVLRTEADQVKNGEL 974
             N ++VF  S+++    A  +  +      E+++L Q        +     E  Q+KN  +
Sbjct:   443 NPVIVFSFSKRDCESLALKMSKLDFNTDEERNSLTQIFYNAIELLPEADRELPQIKN--I 500

Query:   975 RDLLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
               LL  G  IHH+G+  + + ++E LF +  ++VL +T T + G+N+PA TVV
Sbjct:   501 LPLLKRGIGIHHSGLLPILKEIIEILFQEGFLKVLFATETFSIGLNMPAKTVV 553

 Score = 119 (46.9 bits), Expect = 5.3e-06, Sum P(3) = 5.3e-06
 Identities = 35/116 (30%), Positives = 62/116 (53%)

Query:   989 MTRVDRTLVEDL-FADRHI-QVLVSTATLAWGVNLPAHTVVD--RTLVEDLFADRHIQVL 1044
             +T++    +E L  ADR + Q+      L  G+ +    ++   + ++E LF +  ++VL
Sbjct:   476 LTQIFYNAIELLPEADRELPQIKNILPLLKRGIGIHHSGLLPILKEIIEILFQEGFLKVL 535

Query:  1045 VSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQMLGRAGRPQYDTKG 1100
              +T T + G+N+PA TV+    + ++    RWV  G  + +QM GRAGR   D +G
Sbjct:   536 FATETFSIGLNMPAKTVVFTSVRKWDGVGFRWVSGG--EYIQMSGRAGRRGLDDRG 589

 Score = 67 (28.6 bits), Expect = 8.0e-07, Sum P(3) = 8.0e-07
 Identities = 26/92 (28%), Positives = 45/92 (48%)

Query:   458 PDETLVPIDKLPRYVQHAFEDFK-TLNRIQSRLCKSALESDENLLLCAPTGAGKTNVALL 516
             P    VPI +  R  +H    +  TL+  Q     S ++ +E++L+ A T AGKT VA  
Sbjct:   162 PSYPYVPIGEHKR--KHEARTYPFTLDPFQDTAI-SCIDRNESVLVSAHTSAGKTVVAEY 218

Query:   517 CMLQEIGKHINADGTINADEFKIIYVAPMRSL 548
              + Q +            D+ ++IY +P+++L
Sbjct:   219 AIAQSL-----------RDKQRVIYTSPIKAL 239

 Score = 66 (28.3 bits), Expect = 8.0e-07, Sum P(3) = 8.0e-07
 Identities = 37/130 (28%), Positives = 60/130 (46%)

Query:   771 LLCMLQEIGKHINADGTINADEFKIIYVAP-MRSLV---QEMVGNFGK---DEIHLLHDE 823
             L  +  ++G  +  D TIN D   ++     +RS++    E++        DE+H + D+
Sbjct:   247 LQAIFGDVGL-MTGDVTINPDAGCLVMTTEILRSMLYRGSEVMREVAWVVFDEVHYMRDK 305

Query:   824 -RGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVAT-LLRIKPET-GLFYFDNSF 880
              RG V E  I           + V  V LSAT+PN  + A  +++I  +   + Y D  F
Sbjct:   306 SRGVVWEETII-------LLPDKVHYVFLSATIPNAMEFAEWIVKIHNQPCHVVYTD--F 356

Query:   881 RPVALEQQYI 890
             RP  L Q Y+
Sbjct:   357 RPTPL-QHYL 365

 Score = 66 (28.3 bits), Expect = 9.6e-05, Sum P(3) = 9.6e-05
 Identities = 37/130 (28%), Positives = 60/130 (46%)

Query:   515 LLCMLQEIGKHINADGTINADEFKIIYVAP-MRSLV---QEMVGNFGK---DEIHLLHDE 567
             L  +  ++G  +  D TIN D   ++     +RS++    E++        DE+H + D+
Sbjct:   247 LQAIFGDVGL-MTGDVTINPDAGCLVMTTEILRSMLYRGSEVMREVAWVVFDEVHYMRDK 305

Query:   568 -RGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVAT-LLRIKPET-GLFYFDNSF 624
              RG V E  I           + V  V LSAT+PN  + A  +++I  +   + Y D  F
Sbjct:   306 SRGVVWEETII-------LLPDKVHYVFLSATIPNAMEFAEWIVKIHNQPCHVVYTD--F 356

Query:   625 RPVALEQQYI 634
             RP  L Q Y+
Sbjct:   357 RPTPL-QHYL 365

 Score = 46 (21.3 bits), Expect = 7.7e-05, Sum P(3) = 7.7e-05
 Identities = 13/51 (25%), Positives = 22/51 (43%)

Query:   539 IIYVAPMRSLVQEMVGNFGKDEIHLLHDERGPVLEALIARTIRNIEATQED 589
             ++Y     + +Q  +   G D IHL+ DE+G   E    + +  I     D
Sbjct:   351 VVYTDFRPTPLQHYLFPAGGDGIHLVVDEKGTFREENFQKAMATISDNSGD 401

 Score = 46 (21.3 bits), Expect = 7.7e-05, Sum P(3) = 7.7e-05
 Identities = 13/51 (25%), Positives = 22/51 (43%)

Query:   795 IIYVAPMRSLVQEMVGNFGKDEIHLLHDERGPVLEALIARTIRNIEATQED 845
             ++Y     + +Q  +   G D IHL+ DE+G   E    + +  I     D
Sbjct:   351 VVYTDFRPTPLQHYLFPAGGDGIHLVVDEKGTFREENFQKAMATISDNSGD 401


>SGD|S000003586 [details] [associations]
            symbol:MTR4 "ATP-dependent 3'-5' RNA helicase of the DExD/H
            family" species:4932 "Saccharomyces cerevisiae" [GO:0016491
            "oxidoreductase activity" evidence=IEA] [GO:0055114
            "oxidation-reduction process" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA;IDA] [GO:0034475 "U4 snRNA 3'-end processing"
            evidence=IMP] [GO:0000467 "exonucleolytic trimming to generate
            mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript
            (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0016075 "rRNA catabolic process" evidence=IMP] [GO:0043629
            "ncRNA polyadenylation" evidence=IDA] [GO:0071038 "nuclear
            polyadenylation-dependent tRNA catabolic process" evidence=IGI;IDA]
            [GO:0071035 "nuclear polyadenylation-dependent rRNA catabolic
            process" evidence=IMP] [GO:0071031 "nuclear mRNA surveillance of
            mRNA 3'-end processing" evidence=IGI;IMP] [GO:0071042 "nuclear
            polyadenylation-dependent mRNA catabolic process" evidence=IMP]
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006364 "rRNA
            processing" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
            [GO:0031499 "TRAMP complex" evidence=IDA;IPI] [GO:0008143 "poly(A)
            RNA binding" evidence=IDA] [GO:0034459 "ATP-dependent 3'-5' RNA
            helicase activity" evidence=IMP;IDA] [GO:0034476 "U5 snRNA 3'-end
            processing" evidence=IMP] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0016818 "hydrolase activity, acting on acid anhydrides, in
            phosphorus-containing anhydrides" evidence=IEA] [GO:0071049
            "nuclear retention of pre-mRNA with aberrant 3'-ends at the site of
            transcription" evidence=IGI] [GO:0016817 "hydrolase activity,
            acting on acid anhydrides" evidence=IEA] [GO:0071051
            "polyadenylation-dependent snoRNA 3'-end processing" evidence=IMP]
            InterPro:IPR001650 InterPro:IPR011254 InterPro:IPR011545
            InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
            SGD:S000003586 GO:GO:0005524 GO:GO:0005730 EMBL:BK006943
            GO:GO:0016491 GO:GO:0031499 GO:GO:0043629 GO:GO:0071035
            GO:GO:0071038 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            SUPFAM:SSF56821 GO:GO:0000467 GO:GO:0071042 GO:GO:0071051
            GO:GO:0008143 GO:GO:0034459 eggNOG:COG4581 GO:GO:0034475
            GO:GO:0034476 GeneTree:ENSGT00690000102230 HOGENOM:HOG000163047
            KO:K12598 OMA:ENFQKAM InterPro:IPR025696 Pfam:PF13234
            OrthoDB:EOG4S1XG7 GO:GO:0071049 EMBL:Z49325 PIR:S56822
            RefSeq:NP_012485.1 PDB:2XGJ PDB:3L9O PDBsum:2XGJ PDBsum:3L9O
            ProteinModelPortal:P47047 SMR:P47047 DIP:DIP-6394N IntAct:P47047
            MINT:MINT-620894 STRING:P47047 PaxDb:P47047 PeptideAtlas:P47047
            EnsemblFungi:YJL050W GeneID:853397 KEGG:sce:YJL050W CYGD:YJL050w
            EvolutionaryTrace:P47047 NextBio:973882 Genevestigator:P47047
            GermOnline:YJL050W Uniprot:P47047
        Length = 1073

 Score = 148 (57.2 bits), Expect = 8.4e-07, Sum P(2) = 8.4e-07
 Identities = 88/360 (24%), Positives = 152/360 (42%)

Query:   771 LLCMLQEIGKHINADGTINADEFKIIYVAP-MRSLV---QEMVGNFGK---DEIHLLHD- 822
             LL    ++G  +  D TIN D   ++     +RS++    E++        DE+H + D 
Sbjct:   212 LLAEFGDVGL-MTGDITINPDAGCLVMTTEILRSMLYRGSEVMREVAWVIFDEVHYMRDK 270

Query:   823 ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVAT-LLRIKPETGLFYFDNSFR 881
             ERG V E  I           + VR V LSAT+PN  + A  + +I  +     + N FR
Sbjct:   271 ERGVVWEETII-------LLPDKVRYVFLSATIPNAMEFAEWICKIHSQPCHIVYTN-FR 322

Query:   882 PVALEQQ---------YIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQLLVFVHSRKETG 932
             P  L+           Y+ V EK     F+  N   ++K M     NQ+    +S    G
Sbjct:   323 PTPLQHYLFPAHGDGIYLVVDEKST---FREEN---FQKAMASIS-NQIGDDPNSTDSRG 375

Query:   933 KTARAIRDMCLEKDTLGQFLR-------EGSASMEVLRTEADQVKNGELR-DLLPYGFAI 984
             K  +  +    + D  G   +       +    + V        +   L+   L +    
Sbjct:   376 KKGQTYKGGSAKGDAKGDIYKIVKMIWKKKYNPVIVFSFSKRDCEELALKMSKLDFNSDD 435

Query:   985 HHAGMTRVDRTLVEDL-FADRHI-QVLVSTATLAWGVNLPAHTVVD--RTLVEDLFADRH 1040
                 +T++    +  L   DR + Q+      L  G+ +    ++   + ++E LF +  
Sbjct:   436 EKEALTKIFNNAIALLPETDRELPQIKHILPLLRRGIGIHHSGLLPILKEVIEILFQEGF 495

Query:  1041 IQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQMLGRAGRPQYDTKG 1100
             ++VL +T T + G+N+PA TV+    + ++ ++ RWV  G  + +QM GRAGR   D +G
Sbjct:   496 LKVLFATETFSIGLNMPAKTVVFTSVRKWDGQQFRWVSGG--EYIQMSGRAGRRGLDDRG 553

 Score = 62 (26.9 bits), Expect = 8.4e-07, Sum P(2) = 8.4e-07
 Identities = 34/124 (27%), Positives = 57/124 (45%)

Query:   438 KQRKGYEEVHVPALKPKPMGPDETLVPIDKLPRYVQHAFEDFKTLNRIQSRLCKSALESD 497
             K R  ++  H  AL P     D T  PI +  R  +     F TL+  Q     S ++  
Sbjct:   112 KVRLSHQVRHQVALPPNY---DYT--PIAEHKRVNEARTYPF-TLDPFQDTAI-SCIDRG 164

Query:   498 ENLLLCAPTGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSL----VQEMV 553
             E++L+ A T AGKT VA   + Q +            ++ ++IY +P+++L     +E++
Sbjct:   165 ESVLVSAHTSAGKTVVAEYAIAQSL-----------KNKQRVIYTSPIKALSNQKYRELL 213

Query:   554 GNFG 557
               FG
Sbjct:   214 AEFG 217


>CGD|CAL0002171 [details] [associations]
            symbol:orf19.6425 species:5476 "Candida albicans" [GO:0005829
            "cytosol" evidence=IEA] [GO:0055087 "Ski complex" evidence=IEA]
            [GO:0070478 "nuclear-transcribed mRNA catabolic process, 3'-5'
            exonucleolytic nonsense-mediated decay" evidence=IEA] [GO:0070481
            "nuclear-transcribed mRNA catabolic process, non-stop decay"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
            CGD:CAL0002171 GO:GO:0005524 GO:GO:0003676 EMBL:AACQ01000073
            EMBL:AACQ01000072 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG4581 KO:K12599 RefSeq:XP_716180.1
            RefSeq:XP_716263.1 ProteinModelPortal:Q5A337 STRING:Q5A337
            GeneID:3642143 GeneID:3642220 KEGG:cal:CaO19.13783
            KEGG:cal:CaO19.6425 Uniprot:Q5A337
        Length = 1245

 Score = 140 (54.3 bits), Expect = 8.4e-07, Sum P(4) = 8.4e-07
 Identities = 34/110 (30%), Positives = 59/110 (53%)

Query:   922 LVFVHSRKETGKTARAIRDM----CLEKDTLGQFLREGSASMEVLRTEADQVKNGELRDL 977
             +VFV S+K   + A ++R +      EK  +  F+      ++    E  Q+   ++R++
Sbjct:   583 VVFVFSKKRCEEYADSLRSVDFNNAREKSEIHMFIDRAVGRLKKEDRELPQIL--KIREM 640

Query:   978 LPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
             L  G A+HH G+  + +  +E LFA   ++VL +T T A G+NLP  TV+
Sbjct:   641 LGRGIAVHHGGLLPIVKECIEILFAKSLVKVLFATETFAMGLNLPTRTVI 690

 Score = 78 (32.5 bits), Expect = 8.4e-07, Sum P(4) = 8.4e-07
 Identities = 34/119 (28%), Positives = 55/119 (46%)

Query:   559 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGL 617
             DE+H ++D +RG V E +I           + V+ + LSAT+PN  + A  +    +  +
Sbjct:   404 DEVHYVNDIDRGVVWEEVIIML-------PDHVKYILLSATVPNTFEFANWVGRTKQKDI 456

Query:   618 FYFDNSFRPVALEQQYIGVTEKKAL-------KRFQVMNDIVYEKVMEHAGRNQLLVST 669
             +      RPV LE   I V+ K  L       +RFQ      ++ ++E  G+   L ST
Sbjct:   457 YVISTPKRPVPLE---IFVSAKNQLFKVVDANRRFQENEFRKHKDLLEGGGKKNELPST 512

 Score = 75 (31.5 bits), Expect = 1.6e-06, Sum P(4) = 1.6e-06
 Identities = 39/134 (29%), Positives = 62/134 (46%)

Query:   815 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGL 873
             DE+H ++D +RG V E +I           + V+ + LSAT+PN  + A  +    +  +
Sbjct:   404 DEVHYVNDIDRGVVWEEVIIML-------PDHVKYILLSATVPNTFEFANWVGRTKQKDI 456

Query:   874 FYFDNSFRPVALEQQYIGVTEKKAL-------KRFQVMNDIVYEKVMEHAGR-NQL---L 922
             +      RPV LE   I V+ K  L       +RFQ      ++ ++E  G+ N+L    
Sbjct:   457 YVISTPKRPVPLE---IFVSAKNQLFKVVDANRRFQENEFRKHKDLLEGGGKKNELPSTT 513

Query:   923 VFVHSRKETGKTAR 936
             +   SR   G TAR
Sbjct:   514 MGSGSRGGPGGTAR 527

 Score = 47 (21.6 bits), Expect = 8.4e-07, Sum P(4) = 8.4e-07
 Identities = 18/63 (28%), Positives = 29/63 (46%)

Query:   494 LESDENLLLCAPTGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMV 553
             LE  +++ + A T AGKT VA   +      H N          K IY +P+++L  +  
Sbjct:   301 LEQGDSVFVAAHTSAGKTVVAEYAIAMA---HRNMT--------KCIYTSPIKALSNQKF 349

Query:   554 GNF 556
              +F
Sbjct:   350 RDF 352

 Score = 42 (19.8 bits), Expect = 8.4e-07, Sum P(4) = 8.4e-07
 Identities = 13/38 (34%), Positives = 19/38 (50%)

Query:  1625 LSIKRLTLQQKAKIKLDFVAPNPGHHSYALYFMSDAYL 1662
             L++++  L +K K    +V PN   H Y  Y   D YL
Sbjct:   993 LTVEKDQLLEKLKSSKAYVCPNFRQH-YVEYL--DRYL 1027


>DICTYBASE|DDB_G0275633 [details] [associations]
            symbol:DDB_G0275633 "superkiller viralicidic activity
            2-like protein" species:44689 "Dictyostelium discoideum"
            [GO:0016818 "hydrolase activity, acting on acid anhydrides, in
            phosphorus-containing anhydrides" evidence=IEA] [GO:0016817
            "hydrolase activity, acting on acid anhydrides" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0016787
            "hydrolase activity" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
            PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0275633 GO:GO:0005524
            GO:GO:0003676 EMBL:AAFI02000013 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG4581 KO:K12598 OMA:ENFQKAM
            InterPro:IPR025696 Pfam:PF13234 RefSeq:XP_643574.1
            ProteinModelPortal:Q86IE2 STRING:Q86IE2 EnsemblProtists:DDB0233453
            GeneID:8620161 KEGG:ddi:DDB_G0275633 InParanoid:Q86IE2
            ProtClustDB:CLSZ2444279 Uniprot:Q86IE2
        Length = 1128

 Score = 125 (49.1 bits), Expect = 8.6e-07, Sum P(3) = 8.6e-07
 Identities = 28/79 (35%), Positives = 47/79 (59%)

Query:  1029 RTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQML 1088
             + ++E LF   +I+ L +T T + G+N+PA TVI    + ++ E  RW+  G  + +QM 
Sbjct:   537 KEIIEILFQYGYIKALFATETFSIGLNMPAKTVIFTSVRKFDGEGMRWISGG--EYIQMS 594

Query:  1089 GRAGRPQYDTKGEGVLITN 1107
             GRAGR   D +G  +L+ +
Sbjct:   595 GRAGRRGLDERGIVILMVD 613

 Score = 115 (45.5 bits), Expect = 9.1e-06, Sum P(3) = 9.1e-06
 Identities = 43/168 (25%), Positives = 79/168 (47%)

Query:   870 ETGLFYFDNSFRPVA-LEQQYIGVTEKKALKRF---QVMNDI--VYEKVMEHAGRNQLLV 923
             E G+F  +N  + ++ L+Q  +G     + KR    +  +D   + + +ME      +++
Sbjct:   406 ENGVFREENFLKSLSNLQQPEMGGQSGASRKRGGGNKGPSDCYKIVKMIMER-NYQPVII 464

Query:   924 FVHSRKETGKTARAIRDMCL----EKDTLGQFLREGSASMEVLRTEADQVKNGELRDLLP 979
             F  S+KE    A  +  +      EK+ +         S+     +   V N  +  LL 
Sbjct:   465 FSFSKKECETYALQMSKLDFNNDDEKNAVETIFNNAIDSLSESDKQLPAVIN--ILPLLK 522

Query:   980 YGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
              G  IHHAG+  + + ++E LF   +I+ L +T T + G+N+PA TV+
Sbjct:   523 RGIGIHHAGLLPILKEIIEILFQYGYIKALFATETFSIGLNMPAKTVI 570

 Score = 83 (34.3 bits), Expect = 8.6e-07, Sum P(3) = 8.6e-07
 Identities = 40/125 (32%), Positives = 61/125 (48%)

Query:   776 QEIGKHINADGTINADEFKIIYVAP-MRSLV---QEMVGNFGK---DEIHLLHD-ERGPV 827
             Q++G  +  D TINA+   ++     +RS++    E +        DEIH L D ERG V
Sbjct:   279 QDVGL-MTGDITINANASCLVMTTEILRSMLYRGSETMREVSWVIFDEIHYLRDKERGVV 337

Query:   828 LEALIARTIRNIEATQEDVRLVGLSATLPNYKDVAT-LLRI-KPETGLFYFDNSFRPVAL 885
              E  I           + V+ V LSAT+PN ++ A  + +I K    + Y +  +RP+ L
Sbjct:   338 WEETII-------LLPDSVKFVFLSATIPNAREFAAWIAKIHKQPCHVVYTE--YRPIPL 388

Query:   886 EQQYI 890
              Q YI
Sbjct:   389 -QHYI 392

 Score = 83 (34.3 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
 Identities = 40/125 (32%), Positives = 61/125 (48%)

Query:   520 QEIGKHINADGTINADEFKIIYVAP-MRSLV---QEMVGNFGK---DEIHLLHD-ERGPV 571
             Q++G  +  D TINA+   ++     +RS++    E +        DEIH L D ERG V
Sbjct:   279 QDVGL-MTGDITINANASCLVMTTEILRSMLYRGSETMREVSWVIFDEIHYLRDKERGVV 337

Query:   572 LEALIARTIRNIEATQEDVRLVGLSATLPNYKDVAT-LLRI-KPETGLFYFDNSFRPVAL 629
              E  I           + V+ V LSAT+PN ++ A  + +I K    + Y +  +RP+ L
Sbjct:   338 WEETII-------LLPDSVKFVFLSATIPNAREFAAWIAKIHKQPCHVVYTE--YRPIPL 388

Query:   630 EQQYI 634
              Q YI
Sbjct:   389 -QHYI 392

 Score = 52 (23.4 bits), Expect = 8.6e-07, Sum P(3) = 8.6e-07
 Identities = 17/57 (29%), Positives = 31/57 (54%)

Query:   492 SALESDENLLLCAPTGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSL 548
             + +E +E++L+ A T AGKT VA   +   +      DG       ++IY +P+++L
Sbjct:   221 ACIERNESVLVSAHTSAGKTVVAEYSIATAL-----RDGQ------RVIYTSPIKAL 266

 Score = 39 (18.8 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
 Identities = 13/36 (36%), Positives = 17/36 (47%)

Query:    51 RMGDRFMRTKPIKAEERKVKRQKRDEAQYDFTRMKG 86
             R G R + T PIKA   +  R  ++  Q D   M G
Sbjct:   252 RDGQRVIYTSPIKALSNQKFRDLQETFQ-DVGLMTG 286


>UNIPROTKB|G3MYJ7 [details] [associations]
            symbol:SKIV2L2 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            GeneTree:ENSGT00690000102230 EMBL:DAAA02050346 EMBL:DAAA02050343
            EMBL:DAAA02050344 EMBL:DAAA02050345 Ensembl:ENSBTAT00000064767
            Uniprot:G3MYJ7
        Length = 605

 Score = 129 (50.5 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
 Identities = 27/76 (35%), Positives = 46/76 (60%)

Query:  1032 VEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQMLGRA 1091
             +E LF++  I+ L +T T A G+N+PA TV+    + ++ +  RW+  G  + +QM GRA
Sbjct:   465 IEILFSEGLIKALFATETFAMGINMPARTVLFTNARKFDGKDFRWISSG--EYIQMSGRA 522

Query:  1092 GRPQYDTKGEGVLITN 1107
             GR   D +G  +L+ +
Sbjct:   523 GRRGMDDRGIVILMVD 538

 Score = 119 (46.9 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
 Identities = 33/122 (27%), Positives = 62/122 (50%)

Query:   908 VYEKVMEHAGRNQLLVFVHSRKETGKTARAIRDMCLEKDTLGQFLREG-SASMEVLRTEA 966
             + + +ME      +++F  S+K+    A  +  +    D   + + E  S +++ L  E 
Sbjct:   375 IVKMIMER-NFQPVIIFSFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFSNAIDCLSDED 433

Query:   967 DQVKNGE-LRDLLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHT 1025
              ++   E +  LL  G  IHH G+  + +  +E LF++  I+ L +T T A G+N+PA T
Sbjct:   434 KKLPQVENVLPLLKRGIGIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPART 493

Query:  1026 VV 1027
             V+
Sbjct:   494 VL 495

 Score = 71 (30.1 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
 Identities = 29/79 (36%), Positives = 38/79 (48%)

Query:   559 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVAT-LLRI-KPET 615
             DEIH + D ERG V E  I           ++V  V LSAT+PN +  A  +  + K   
Sbjct:   250 DEIHYMRDSERGVVWEETII-------LLPDNVHYVFLSATIPNARQFAEWICHLHKQPC 302

Query:   616 GLFYFDNSFRPVALEQQYI 634
              + Y D  +RP  L Q YI
Sbjct:   303 HVIYTD--YRPTPL-QHYI 318

 Score = 71 (30.1 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
 Identities = 29/79 (36%), Positives = 38/79 (48%)

Query:   815 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVAT-LLRI-KPET 871
             DEIH + D ERG V E  I           ++V  V LSAT+PN +  A  +  + K   
Sbjct:   250 DEIHYMRDSERGVVWEETII-------LLPDNVHYVFLSATIPNARQFAEWICHLHKQPC 302

Query:   872 GLFYFDNSFRPVALEQQYI 890
              + Y D  +RP  L Q YI
Sbjct:   303 HVIYTD--YRPTPL-QHYI 318

 Score = 48 (22.0 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
 Identities = 17/53 (32%), Positives = 29/53 (54%)

Query:   459 DETLVPIDKLPRYVQHAFEDFKTLNRIQSRLCKSALESDENLLLCAPTGAGKT 511
             DE  +P+   PR  + A E    L+  Q R     +++++++L+ A T AGKT
Sbjct:   117 DEDYLPLK--PRVGKAAKEYPFILDAFQ-REAIQCVDNNQSVLVSAHTSAGKT 166

 Score = 43 (20.2 bits), Expect = 0.00082, Sum P(3) = 0.00081
 Identities = 11/35 (31%), Positives = 17/35 (48%)

Query:   539 IIYVAPMRSLVQEMVGNFGKDEIHLLHDERGPVLE 573
             +IY     + +Q  +   G D +HL+ DE G   E
Sbjct:   304 VIYTDYRPTPLQHYIFPAGGDGLHLVVDENGDFRE 338

 Score = 43 (20.2 bits), Expect = 0.00082, Sum P(3) = 0.00081
 Identities = 11/35 (31%), Positives = 17/35 (48%)

Query:   795 IIYVAPMRSLVQEMVGNFGKDEIHLLHDERGPVLE 829
             +IY     + +Q  +   G D +HL+ DE G   E
Sbjct:   304 VIYTDYRPTPLQHYIFPAGGDGLHLVVDENGDFRE 338

 Score = 40 (19.1 bits), Expect = 8.7e-06, Sum P(3) = 8.7e-06
 Identities = 15/47 (31%), Positives = 20/47 (42%)

Query:    40 VCSLVGKLEGTRMGDRFMRTKPIKAEERKVKRQKRDEAQYDFTRMKG 86
             VC+        R   R + T PIKA   +  R+  +E Q D   M G
Sbjct:   167 VCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQ-DVGLMTG 212


>UNIPROTKB|F1MJX4 [details] [associations]
            symbol:SKIV2L2 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
            [GO:0000460 "maturation of 5.8S rRNA" evidence=IEA] [GO:0000178
            "exosome (RNase complex)" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
            InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
            PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 GO:GO:0000178 GO:GO:0071013 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0000460 GO:GO:0008026
            GeneTree:ENSGT00690000102230 OMA:ENFQKAM InterPro:IPR025696
            Pfam:PF13234 EMBL:DAAA02050346 EMBL:DAAA02050343 EMBL:DAAA02050344
            EMBL:DAAA02050345 IPI:IPI00839454 Ensembl:ENSBTAT00000047363
            Uniprot:F1MJX4
        Length = 937

 Score = 129 (50.5 bits), Expect = 1.6e-06, Sum P(4) = 1.6e-06
 Identities = 27/76 (35%), Positives = 46/76 (60%)

Query:  1032 VEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQMLGRA 1091
             +E LF++  I+ L +T T A G+N+PA TV+    + ++ +  RW+  G  + +QM GRA
Sbjct:   465 IEILFSEGLIKALFATETFAMGINMPARTVLFTNARKFDGKDFRWISSG--EYIQMSGRA 522

Query:  1092 GRPQYDTKGEGVLITN 1107
             GR   D +G  +L+ +
Sbjct:   523 GRRGMDDRGIVILMVD 538

 Score = 119 (46.9 bits), Expect = 1.6e-05, Sum P(4) = 1.6e-05
 Identities = 33/122 (27%), Positives = 62/122 (50%)

Query:   908 VYEKVMEHAGRNQLLVFVHSRKETGKTARAIRDMCLEKDTLGQFLREG-SASMEVLRTEA 966
             + + +ME      +++F  S+K+    A  +  +    D   + + E  S +++ L  E 
Sbjct:   375 IVKMIMER-NFQPVIIFSFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFSNAIDCLSDED 433

Query:   967 DQVKNGE-LRDLLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHT 1025
              ++   E +  LL  G  IHH G+  + +  +E LF++  I+ L +T T A G+N+PA T
Sbjct:   434 KKLPQVENVLPLLKRGIGIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPART 493

Query:  1026 VV 1027
             V+
Sbjct:   494 VL 495

 Score = 71 (30.1 bits), Expect = 1.6e-06, Sum P(4) = 1.6e-06
 Identities = 29/79 (36%), Positives = 38/79 (48%)

Query:   559 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVAT-LLRI-KPET 615
             DEIH + D ERG V E  I           ++V  V LSAT+PN +  A  +  + K   
Sbjct:   250 DEIHYMRDSERGVVWEETII-------LLPDNVHYVFLSATIPNARQFAEWICHLHKQPC 302

Query:   616 GLFYFDNSFRPVALEQQYI 634
              + Y D  +RP  L Q YI
Sbjct:   303 HVIYTD--YRPTPL-QHYI 318

 Score = 71 (30.1 bits), Expect = 1.6e-06, Sum P(4) = 1.6e-06
 Identities = 29/79 (36%), Positives = 38/79 (48%)

Query:   815 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVAT-LLRI-KPET 871
             DEIH + D ERG V E  I           ++V  V LSAT+PN +  A  +  + K   
Sbjct:   250 DEIHYMRDSERGVVWEETII-------LLPDNVHYVFLSATIPNARQFAEWICHLHKQPC 302

Query:   872 GLFYFDNSFRPVALEQQYI 890
              + Y D  +RP  L Q YI
Sbjct:   303 HVIYTD--YRPTPL-QHYI 318

 Score = 51 (23.0 bits), Expect = 1.6e-06, Sum P(4) = 1.6e-06
 Identities = 16/45 (35%), Positives = 24/45 (53%)

Query:  1401 RVPKLGKTIHKYVHQFPKLELATHIQPITRSTLRVELTISPDFQW 1445
             ++ KLGK I +Y+H+ PK  L   +QP     ++ E     DF W
Sbjct:   630 QLAKLGKEIEEYIHK-PKYCLP-FLQPGRLVKVKNE---GDDFGW 669

 Score = 48 (22.0 bits), Expect = 1.6e-06, Sum P(4) = 1.6e-06
 Identities = 17/53 (32%), Positives = 29/53 (54%)

Query:   459 DETLVPIDKLPRYVQHAFEDFKTLNRIQSRLCKSALESDENLLLCAPTGAGKT 511
             DE  +P+   PR  + A E    L+  Q R     +++++++L+ A T AGKT
Sbjct:   117 DEDYLPLK--PRVGKAAKEYPFILDAFQ-REAIQCVDNNQSVLVSAHTSAGKT 166

 Score = 43 (20.2 bits), Expect = 0.00076, Sum P(4) = 0.00076
 Identities = 11/35 (31%), Positives = 17/35 (48%)

Query:   539 IIYVAPMRSLVQEMVGNFGKDEIHLLHDERGPVLE 573
             +IY     + +Q  +   G D +HL+ DE G   E
Sbjct:   304 VIYTDYRPTPLQHYIFPAGGDGLHLVVDENGDFRE 338

 Score = 43 (20.2 bits), Expect = 0.00076, Sum P(4) = 0.00076
 Identities = 11/35 (31%), Positives = 17/35 (48%)

Query:   795 IIYVAPMRSLVQEMVGNFGKDEIHLLHDERGPVLE 829
             +IY     + +Q  +   G D +HL+ DE G   E
Sbjct:   304 VIYTDYRPTPLQHYIFPAGGDGLHLVVDENGDFRE 338

 Score = 40 (19.1 bits), Expect = 9.4e-06, Sum P(4) = 9.4e-06
 Identities = 15/47 (31%), Positives = 20/47 (42%)

Query:    40 VCSLVGKLEGTRMGDRFMRTKPIKAEERKVKRQKRDEAQYDFTRMKG 86
             VC+        R   R + T PIKA   +  R+  +E Q D   M G
Sbjct:   167 VCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQ-DVGLMTG 212


>UNIPROTKB|E2RCI5 [details] [associations]
            symbol:SKIV2L2 "Uncharacterized protein" species:9615
            "Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            GeneTree:ENSGT00690000102230 KO:K12598 OMA:ENFQKAM
            InterPro:IPR025696 Pfam:PF13234 CTD:23517 EMBL:AAEX03001437
            RefSeq:XP_849676.1 Ensembl:ENSCAFT00000010985 GeneID:607950
            KEGG:cfa:607950 Uniprot:E2RCI5
        Length = 1042

 Score = 129 (50.5 bits), Expect = 2.0e-06, Sum P(4) = 2.0e-06
 Identities = 27/76 (35%), Positives = 46/76 (60%)

Query:  1032 VEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQMLGRA 1091
             +E LF++  I+ L +T T A G+N+PA TV+    + ++ +  RW+  G  + +QM GRA
Sbjct:   467 IEILFSEGLIKALFATETFAMGINMPARTVLFTNARKFDGKDFRWISSG--EYIQMSGRA 524

Query:  1092 GRPQYDTKGEGVLITN 1107
             GR   D +G  +L+ +
Sbjct:   525 GRRGMDDRGIVILMVD 540

 Score = 119 (46.9 bits), Expect = 2.0e-05, Sum P(4) = 2.0e-05
 Identities = 33/122 (27%), Positives = 62/122 (50%)

Query:   908 VYEKVMEHAGRNQLLVFVHSRKETGKTARAIRDMCLEKDTLGQFLREG-SASMEVLRTEA 966
             + + +ME      +++F  S+K+    A  +  +    D   + + E  S +++ L  E 
Sbjct:   377 IVKMIMER-NFQPVIIFSFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFSNAIDCLSDED 435

Query:   967 DQVKNGE-LRDLLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHT 1025
              ++   E +  LL  G  IHH G+  + +  +E LF++  I+ L +T T A G+N+PA T
Sbjct:   436 KKLPQVEHVLPLLKRGIGIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPART 495

Query:  1026 VV 1027
             V+
Sbjct:   496 VL 497

 Score = 71 (30.1 bits), Expect = 2.0e-06, Sum P(4) = 2.0e-06
 Identities = 29/79 (36%), Positives = 38/79 (48%)

Query:   559 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVAT-LLRI-KPET 615
             DEIH + D ERG V E  I           ++V  V LSAT+PN +  A  +  + K   
Sbjct:   252 DEIHYMRDSERGVVWEETII-------LLPDNVHYVFLSATIPNARQFAEWICHLHKQPC 304

Query:   616 GLFYFDNSFRPVALEQQYI 634
              + Y D  +RP  L Q YI
Sbjct:   305 HVIYTD--YRPTPL-QHYI 320

 Score = 71 (30.1 bits), Expect = 2.0e-06, Sum P(4) = 2.0e-06
 Identities = 29/79 (36%), Positives = 38/79 (48%)

Query:   815 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVAT-LLRI-KPET 871
             DEIH + D ERG V E  I           ++V  V LSAT+PN +  A  +  + K   
Sbjct:   252 DEIHYMRDSERGVVWEETII-------LLPDNVHYVFLSATIPNARQFAEWICHLHKQPC 304

Query:   872 GLFYFDNSFRPVALEQQYI 890
              + Y D  +RP  L Q YI
Sbjct:   305 HVIYTD--YRPTPL-QHYI 320

 Score = 52 (23.4 bits), Expect = 2.0e-06, Sum P(4) = 2.0e-06
 Identities = 17/45 (37%), Positives = 24/45 (53%)

Query:  1401 RVPKLGKTIHKYVHQFPKLELATHIQPITRSTLRVELTISPDFQW 1445
             ++ KLGK I +YVH+ PK  L   +QP     ++ E     DF W
Sbjct:   632 QLAKLGKEIEEYVHK-PKYCLP-FLQPGRLVKVKNE---GDDFGW 671

 Score = 48 (22.0 bits), Expect = 2.0e-06, Sum P(4) = 2.0e-06
 Identities = 17/53 (32%), Positives = 29/53 (54%)

Query:   459 DETLVPIDKLPRYVQHAFEDFKTLNRIQSRLCKSALESDENLLLCAPTGAGKT 511
             DE  +P+   PR  + A E    L+  Q R     +++++++L+ A T AGKT
Sbjct:   119 DEDYLPLK--PRVGKAAKEYPFILDAFQ-REAIQCVDNNQSVLVSAHTSAGKT 168

 Score = 43 (20.2 bits), Expect = 0.00097, Sum P(4) = 0.00097
 Identities = 11/35 (31%), Positives = 17/35 (48%)

Query:   539 IIYVAPMRSLVQEMVGNFGKDEIHLLHDERGPVLE 573
             +IY     + +Q  +   G D +HL+ DE G   E
Sbjct:   306 VIYTDYRPTPLQHYIFPAGGDGLHLVVDENGDFRE 340

 Score = 43 (20.2 bits), Expect = 0.00097, Sum P(4) = 0.00097
 Identities = 11/35 (31%), Positives = 17/35 (48%)

Query:   795 IIYVAPMRSLVQEMVGNFGKDEIHLLHDERGPVLE 829
             +IY     + +Q  +   G D +HL+ DE G   E
Sbjct:   306 VIYTDYRPTPLQHYIFPAGGDGLHLVVDENGDFRE 340

 Score = 40 (19.1 bits), Expect = 1.2e-05, Sum P(4) = 1.2e-05
 Identities = 15/47 (31%), Positives = 20/47 (42%)

Query:    40 VCSLVGKLEGTRMGDRFMRTKPIKAEERKVKRQKRDEAQYDFTRMKG 86
             VC+        R   R + T PIKA   +  R+  +E Q D   M G
Sbjct:   169 VCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQ-DVGLMTG 214


>UNIPROTKB|F1LP39 [details] [associations]
            symbol:Skiv2l "Protein Skiv2l" species:10116 "Rattus
            norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
            PROSITE:PS51194 SMART:SM00490 RGD:1303059 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR025696 Pfam:PF13234 GO:GO:0055087
            OMA:TRLDETC GeneTree:ENSGT00690000102154 IPI:IPI00417365
            Ensembl:ENSRNOT00000000481 Uniprot:F1LP39
        Length = 1206

 Score = 132 (51.5 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
 Identities = 55/198 (27%), Positives = 92/198 (46%)

Query:   921 LLVFVHSRKETGKTARAIRDMCL----EKDTLGQFLREGSASMEVLRTEADQVKNGELRD 976
             ++VF  SR    + A  +  + L    EK  +  FL+   A +     +  QV +  + +
Sbjct:   528 VVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQRCLARLRGSDRQLPQVLH--MSE 585

Query:   977 LLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV-------DR 1029
             LL  G  +HH+G+  + + +VE LF+   ++VL +T T A GVN+PA TVV       D 
Sbjct:   586 LLRRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETFAMGVNMPARTVVFDSMRKHDG 645

Query:  1030 TLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQMLG 1089
             +   DL    ++Q+         G++ P  TVI+         KGR  E+  L  + M+G
Sbjct:   646 STFRDLLPGEYVQMAGRAGRR--GLD-PTGTVILLC-------KGRVPEMADLHRM-MMG 694

Query:  1090 RAGRPQYDTKGEGVLITN 1107
             +  + Q   +    +I N
Sbjct:   695 KPSQLQSQFRLTYTMILN 712

 Score = 74 (31.1 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
 Identities = 28/94 (29%), Positives = 47/94 (50%)

Query:   559 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLL-RIKPETG 616
             DE+H ++D ERG V E ++           E V ++ LSAT+PN  + A  + R+K    
Sbjct:   382 DEVHYINDAERGVVWEEVLIML-------PEHVSIILLSATVPNALEFADWIGRLKRRQ- 433

Query:   617 LFYFDNSFRPVALEQQ-YIGVTEKKALKRFQVMN 649
             ++      RPV LE   + G + K   + F +++
Sbjct:   434 IYVISTVARPVPLEHYLFTGNSPKTQGELFLLLD 467

 Score = 74 (31.1 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
 Identities = 28/94 (29%), Positives = 47/94 (50%)

Query:   815 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLL-RIKPETG 872
             DE+H ++D ERG V E ++           E V ++ LSAT+PN  + A  + R+K    
Sbjct:   382 DEVHYINDAERGVVWEEVLIML-------PEHVSIILLSATVPNALEFADWIGRLKRRQ- 433

Query:   873 LFYFDNSFRPVALEQQ-YIGVTEKKALKRFQVMN 905
             ++      RPV LE   + G + K   + F +++
Sbjct:   434 IYVISTVARPVPLEHYLFTGNSPKTQGELFLLLD 467

 Score = 51 (23.0 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
 Identities = 32/115 (27%), Positives = 53/115 (46%)

Query:   444 EEVHVPALKPKPMGPDETLVPIDKLPRYVQHAFEDFKTLNRIQSRLCKSALESDENLLLC 503
             E+  VP     P+G    L+P    P + Q AFE    + + Q+ L    LE  +++ + 
Sbjct:   240 EQWAVPVDVTSPVGDFYRLIP---QPAF-QWAFEP--DVFQKQAIL---HLEQHDSVFVA 290

Query:   504 APTGAGKTNVA--LLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNF 556
             A T AGKT VA   + + Q   KH+           + IY +P+++L  +   +F
Sbjct:   291 AHTSAGKTVVAEYAIALAQ---KHMT----------RTIYTSPIKALSNQKFRDF 332


>RGD|1303059 [details] [associations]
            symbol:Skiv2l "superkiller viralicidic activity 2-like (S.
            cerevisiae )" species:10116 "Rattus norvegicus" [GO:0055087 "Ski
            complex" evidence=ISO] InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
            RGD:1303059 GO:GO:0005524 GO:GO:0003676 EMBL:BX883045
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG4581 InterPro:IPR025696 Pfam:PF13234 HOGENOM:HOG000163048
            KO:K12599 CTD:6499 HOVERGEN:HBG060025 OrthoDB:EOG47H5P5
            IPI:IPI00417365 RefSeq:NP_998724.1 UniGene:Rn.138027
            ProteinModelPortal:Q6MG76 IntAct:Q6MG76 PhosphoSite:Q6MG76
            PRIDE:Q6MG76 GeneID:294260 KEGG:rno:294260 UCSC:RGD:1303059
            InParanoid:Q6MG76 NextBio:637849 ArrayExpress:Q6MG76
            Genevestigator:Q6MG76 Uniprot:Q6MG76
        Length = 1241

 Score = 132 (51.5 bits), Expect = 2.3e-06, Sum P(3) = 2.3e-06
 Identities = 55/198 (27%), Positives = 92/198 (46%)

Query:   921 LLVFVHSRKETGKTARAIRDMCL----EKDTLGQFLREGSASMEVLRTEADQVKNGELRD 976
             ++VF  SR    + A  +  + L    EK  +  FL+   A +     +  QV +  + +
Sbjct:   563 VVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQRCLARLRGSDRQLPQVLH--MSE 620

Query:   977 LLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV-------DR 1029
             LL  G  +HH+G+  + + +VE LF+   ++VL +T T A GVN+PA TVV       D 
Sbjct:   621 LLRRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETFAMGVNMPARTVVFDSMRKHDG 680

Query:  1030 TLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQMLG 1089
             +   DL    ++Q+         G++ P  TVI+         KGR  E+  L  + M+G
Sbjct:   681 STFRDLLPGEYVQMAGRAGRR--GLD-PTGTVILLC-------KGRVPEMADLHRM-MMG 729

Query:  1090 RAGRPQYDTKGEGVLITN 1107
             +  + Q   +    +I N
Sbjct:   730 KPSQLQSQFRLTYTMILN 747

 Score = 74 (31.1 bits), Expect = 2.3e-06, Sum P(3) = 2.3e-06
 Identities = 28/94 (29%), Positives = 47/94 (50%)

Query:   559 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLL-RIKPETG 616
             DE+H ++D ERG V E ++           E V ++ LSAT+PN  + A  + R+K    
Sbjct:   417 DEVHYINDAERGVVWEEVLIML-------PEHVSIILLSATVPNALEFADWIGRLKRRQ- 468

Query:   617 LFYFDNSFRPVALEQQ-YIGVTEKKALKRFQVMN 649
             ++      RPV LE   + G + K   + F +++
Sbjct:   469 IYVISTVARPVPLEHYLFTGNSPKTQGELFLLLD 502

 Score = 74 (31.1 bits), Expect = 2.3e-06, Sum P(3) = 2.3e-06
 Identities = 28/94 (29%), Positives = 47/94 (50%)

Query:   815 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLL-RIKPETG 872
             DE+H ++D ERG V E ++           E V ++ LSAT+PN  + A  + R+K    
Sbjct:   417 DEVHYINDAERGVVWEEVLIML-------PEHVSIILLSATVPNALEFADWIGRLKRRQ- 468

Query:   873 LFYFDNSFRPVALEQQ-YIGVTEKKALKRFQVMN 905
             ++      RPV LE   + G + K   + F +++
Sbjct:   469 IYVISTVARPVPLEHYLFTGNSPKTQGELFLLLD 502

 Score = 51 (23.0 bits), Expect = 2.3e-06, Sum P(3) = 2.3e-06
 Identities = 32/115 (27%), Positives = 53/115 (46%)

Query:   444 EEVHVPALKPKPMGPDETLVPIDKLPRYVQHAFEDFKTLNRIQSRLCKSALESDENLLLC 503
             E+  VP     P+G    L+P    P + Q AFE    + + Q+ L    LE  +++ + 
Sbjct:   275 EQWAVPVDVTSPVGDFYRLIP---QPAF-QWAFEP--DVFQKQAIL---HLEQHDSVFVA 325

Query:   504 APTGAGKTNVA--LLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNF 556
             A T AGKT VA   + + Q   KH+           + IY +P+++L  +   +F
Sbjct:   326 AHTSAGKTVVAEYAIALAQ---KHMT----------RTIYTSPIKALSNQKFRDF 367


>UNIPROTKB|F1SLL6 [details] [associations]
            symbol:SKIV2L2 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
            [GO:0000460 "maturation of 5.8S rRNA" evidence=IEA] [GO:0000178
            "exosome (RNase complex)" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
            InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
            PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0003676 GO:GO:0000178 GO:GO:0071013 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0000460 GO:GO:0008026
            GeneTree:ENSGT00690000102230 OMA:ENFQKAM InterPro:IPR025696
            Pfam:PF13234 EMBL:FP236391 EMBL:CU929534 Ensembl:ENSSSCT00000018417
            Uniprot:F1SLL6
        Length = 1046

 Score = 129 (50.5 bits), Expect = 2.6e-06, Sum P(4) = 2.6e-06
 Identities = 27/76 (35%), Positives = 46/76 (60%)

Query:  1032 VEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQMLGRA 1091
             +E LF++  I+ L +T T A G+N+PA TV+    + ++ +  RW+  G  + +QM GRA
Sbjct:   468 IEILFSEGLIKALFATETFAMGINMPARTVLFTNARKFDGKDFRWISSG--EYIQMSGRA 525

Query:  1092 GRPQYDTKGEGVLITN 1107
             GR   D +G  +L+ +
Sbjct:   526 GRRGMDDRGIVILMVD 541

 Score = 119 (46.9 bits), Expect = 2.6e-05, Sum P(4) = 2.6e-05
 Identities = 33/122 (27%), Positives = 62/122 (50%)

Query:   908 VYEKVMEHAGRNQLLVFVHSRKETGKTARAIRDMCLEKDTLGQFLREG-SASMEVLRTEA 966
             + + +ME      +++F  S+K+    A  +  +    D   + + E  S +++ L  E 
Sbjct:   378 IVKMIMER-NFQPVIIFSFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFSNAIDCLSDED 436

Query:   967 DQVKNGE-LRDLLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHT 1025
              ++   E +  LL  G  IHH G+  + +  +E LF++  I+ L +T T A G+N+PA T
Sbjct:   437 KKLPQVEHVLPLLKRGIGIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPART 496

Query:  1026 VV 1027
             V+
Sbjct:   497 VL 498

 Score = 71 (30.1 bits), Expect = 2.6e-06, Sum P(4) = 2.6e-06
 Identities = 29/79 (36%), Positives = 38/79 (48%)

Query:   559 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVAT-LLRI-KPET 615
             DEIH + D ERG V E  I           ++V  V LSAT+PN +  A  +  + K   
Sbjct:   253 DEIHYMRDSERGVVWEETII-------LLPDNVHYVFLSATIPNARQFAEWICHLHKQPC 305

Query:   616 GLFYFDNSFRPVALEQQYI 634
              + Y D  +RP  L Q YI
Sbjct:   306 HVIYTD--YRPTPL-QHYI 321

 Score = 71 (30.1 bits), Expect = 2.6e-06, Sum P(4) = 2.6e-06
 Identities = 29/79 (36%), Positives = 38/79 (48%)

Query:   815 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVAT-LLRI-KPET 871
             DEIH + D ERG V E  I           ++V  V LSAT+PN +  A  +  + K   
Sbjct:   253 DEIHYMRDSERGVVWEETII-------LLPDNVHYVFLSATIPNARQFAEWICHLHKQPC 305

Query:   872 GLFYFDNSFRPVALEQQYI 890
              + Y D  +RP  L Q YI
Sbjct:   306 HVIYTD--YRPTPL-QHYI 321

 Score = 51 (23.0 bits), Expect = 2.6e-06, Sum P(4) = 2.6e-06
 Identities = 16/45 (35%), Positives = 24/45 (53%)

Query:  1401 RVPKLGKTIHKYVHQFPKLELATHIQPITRSTLRVELTISPDFQW 1445
             ++ KLGK I +Y+H+ PK  L   +QP     ++ E     DF W
Sbjct:   633 QLAKLGKEIEEYIHK-PKYCLP-FLQPGRLVKVKNE---GDDFGW 672

 Score = 48 (22.0 bits), Expect = 2.6e-06, Sum P(4) = 2.6e-06
 Identities = 17/53 (32%), Positives = 29/53 (54%)

Query:   459 DETLVPIDKLPRYVQHAFEDFKTLNRIQSRLCKSALESDENLLLCAPTGAGKT 511
             DE  +P+   PR  + A E    L+  Q R     +++++++L+ A T AGKT
Sbjct:   120 DEDYLPLK--PRVGKAAKEYPFILDAFQ-REAIQCVDNNQSVLVSAHTSAGKT 169

 Score = 40 (19.1 bits), Expect = 1.5e-05, Sum P(4) = 1.5e-05
 Identities = 15/47 (31%), Positives = 20/47 (42%)

Query:    40 VCSLVGKLEGTRMGDRFMRTKPIKAEERKVKRQKRDEAQYDFTRMKG 86
             VC+        R   R + T PIKA   +  R+  +E Q D   M G
Sbjct:   170 VCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQ-DVGLMTG 215


>POMBASE|SPAC6F12.16c [details] [associations]
            symbol:mtr4 "ATP-dependent RNA helicase, TRAMP complex
            subunit Mtr4" species:4896 "Schizosaccharomyces pombe" [GO:0004004
            "ATP-dependent RNA helicase activity" evidence=ISO] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IDA]
            [GO:0005730 "nucleolus" evidence=ISO] [GO:0006364 "rRNA processing"
            evidence=ISO] [GO:0016078 "tRNA catabolic process" evidence=ISO]
            [GO:0031499 "TRAMP complex" evidence=IDA] [GO:0043630 "ncRNA
            polyadenylation involved in polyadenylation-dependent ncRNA
            catabolic process" evidence=ISO] [GO:0071049 "nuclear retention of
            pre-mRNA with aberrant 3'-ends at the site of transcription"
            evidence=ISO] InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
            PomBase:SPAC6F12.16c GO:GO:0005524 EMBL:CU329670 GO:GO:0005730
            GO:GO:0003676 GO:GO:0031499 GO:GO:0043630 GO:GO:0016078
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
            GO:GO:0004004 HOGENOM:HOG000163047 KO:K12598 InterPro:IPR025696
            Pfam:PF13234 EMBL:AB027847 PIR:T11667 RefSeq:NP_593302.1
            ProteinModelPortal:O14232 STRING:O14232 EnsemblFungi:SPAC6F12.16c.1
            GeneID:2541639 KEGG:spo:SPAC6F12.16c OMA:DDRISAD OrthoDB:EOG4S1XG7
            NextBio:20802732 GO:GO:0071049 Uniprot:O14232
        Length = 1117

 Score = 143 (55.4 bits), Expect = 2.9e-06, Sum P(3) = 2.9e-06
 Identities = 93/369 (25%), Positives = 158/369 (42%)

Query:   771 LLCMLQEIGKHINADGTINADEFKIIYVAP-MRSLV---QEMVGNFGK---DEIHLLHD- 822
             LL    ++G  +  D TIN D   ++     +RS++    E++        DEIH + D 
Sbjct:   261 LLAEFGDVGL-MTGDVTINPDATCLVMTTEILRSMLYRGSEVMREVAWVIFDEIHYMRDK 319

Query:   823 ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVAT-LLRI-KPETGLFYFDNSF 880
             ERG V E  I           +    V LSAT+PN    A  + +I +    + Y D  F
Sbjct:   320 ERGVVWEETII-------LLPDKSHFVFLSATIPNAMQFAEWITKIHRQPCHVVYTD--F 370

Query:   881 RPVALEQQYI---G------VTEKKALKRFQVMN-DIVYEKVMEHAGRNQLLVFVHSRKE 930
             RP  L Q Y+   G      V ++K+   F+  N       +ME  G +   +      +
Sbjct:   371 RPTPL-QHYLFPSGSDGIHLVVDEKS--NFREENFQRAMSALMEKQGDDPAAMATKGNAK 427

Query:   931 TGKTARA----------IRDMCLEKD----TLGQFLREGSASMEVLRTEADQVKNGELRD 976
              GKT +           I  M + K+     +  F +    ++ +  ++ D     E RD
Sbjct:   428 KGKTGKGGVKGPSDIYKIVKMIMVKNYNPVIVFSFSKRECEALALQMSKLDMNDQTE-RD 486

Query:   977 LLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVVDRTLVEDLF 1036
             L+   F      ++  DR L +      HI  L+       G++      + + ++E LF
Sbjct:   487 LVTTIFNNAVNQLSEKDRELPQI----EHILPLLRRGI---GIHHSGLLPILKEVIEILF 539

Query:  1037 ADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQMLGRAGRPQY 1096
              +  ++VL +T T + G+N+PA TV+    + ++ +  RW+  G  + +QM GRAGR   
Sbjct:   540 QEGLLKVLFATETFSIGLNMPAKTVVFTNVRKFDGKTFRWISGG--EYIQMSGRAGRRGL 597

Query:  1097 DTKGEGVLI 1105
             D +G  +L+
Sbjct:   598 DDRGIVILM 606

 Score = 72 (30.4 bits), Expect = 2.9e-06, Sum P(3) = 2.9e-06
 Identities = 29/104 (27%), Positives = 51/104 (49%)

Query:   458 PDETLVPIDKLPRYVQHAFEDFKTLNRIQSRLCKSALESDENLLLCAPTGAGKTNVALLC 517
             P+   VPI K    +  A     TL+  Q+ +  + +E  E++L+ A T AGKT VA   
Sbjct:   175 PNYDYVPISKHKSPIPPARTYPFTLDPFQA-VSIACIERQESVLVSAHTSAGKTVVAEYA 233

Query:   518 MLQEIGKHINADGTINADEFKIIYVAPMRSL----VQEMVGNFG 557
             + Q +            D+ ++IY +P+++L     +E++  FG
Sbjct:   234 VAQSL-----------RDKQRVIYTSPIKALSNQKYRELLAEFG 266

 Score = 39 (18.8 bits), Expect = 2.9e-06, Sum P(3) = 2.9e-06
 Identities = 9/37 (24%), Positives = 20/37 (54%)

Query:  1163 RMLRAPNLYGISHDALKEDPLLECHRADLIHTAALHL 1199
             +M+ A  + G +    K +  + C   D++ +A+L+L
Sbjct:  1081 QMVDAAKVIGNTSLQQKMEDTIACIHRDIVFSASLYL 1117


>UNIPROTKB|G4NH56 [details] [associations]
            symbol:MGG_03931 "FRQ-interacting RNA helicase"
            species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0005730 GO:GO:0031499 GO:GO:0043629
            GO:GO:0071035 GO:GO:0071038 EMBL:CM001236 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0000467 GO:GO:0071042
            GO:GO:0071051 GO:GO:0008143 GO:GO:0034459 GO:GO:0034475
            GO:GO:0034476 KO:K12598 InterPro:IPR025696 Pfam:PF13234
            GO:GO:0071049 RefSeq:XP_003719933.1 EnsemblFungi:MGG_03931T0
            GeneID:2677161 KEGG:mgr:MGG_03931 Uniprot:G4NH56
        Length = 1102

 Score = 141 (54.7 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
 Identities = 78/308 (25%), Positives = 128/308 (41%)

Query:   815 DEIHLLHDE-RGPVLEALIARTIRNIEATQEDVRLVGLSATLPN-YKDVATLLRIKPET- 871
             DEIH + D  RG V E  I           + VR V LSAT+PN ++    + +I  +  
Sbjct:   289 DEIHYMRDATRGVVWEETIIML-------PDKVRYVFLSATIPNAFQFAEWIAKIHRQAC 341

Query:   872 GLFYFDNSFRPVALEQQ---------YIGVTEKKALKRFQVMNDIVYEKVMEHAGRNQLL 922
              + Y D  FRP  L+           YI V EK   +  + M     E +   AG+N   
Sbjct:   342 HVVYTD--FRPTPLQNYVFPAGGDGIYIMVDEKGVFREKKFM-----EAIGSIAGKNDDD 394

Query:   923 VFVHSRKETGKTARAIRDMCLEKDT-----LGQFLREGSASMEVLRTEADQVKNGELR-D 976
               +  +K  GK  +A+++   +        +   +R     + V      + +N  L+  
Sbjct:   395 DSMPRQKGKGKNKKAVKNTVPDSKADITKIIKMIMRRAYHPVIVFNFSKRECENLALKVS 454

Query:   977 LLPYGFAIHHAGMTRVDRTLVEDLFADRH----IQVLVSTATLAWGVNLPAHTVVDRTLV 1032
              L +        +  + R  +  L  +      IQ L+       GV+      + +  +
Sbjct:   455 TLNFNHESEQKLVEDIFRNAIMSLSEEDQGLPQIQHLLPLLKKGIGVHHSGLLPILKETI 514

Query:  1033 EDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQMLGRAG 1092
             E LF +  I+VL +T T + G+N+PA TV+    + ++  K R   L   + +QM GRAG
Sbjct:   515 EILFQENLIKVLFATETFSIGLNMPAKTVVFSQVKKFDGVKER--PLTPSEYIQMSGRAG 572

Query:  1093 RPQYDTKG 1100
             R   D +G
Sbjct:   573 RRGLDDRG 580

 Score = 63 (27.2 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
 Identities = 23/62 (37%), Positives = 33/62 (53%)

Query:   455 PMGPDETLVPID--KLPRYVQHAFEDFKTLNRIQSRLCKSALESDENLLLCAPTGAGKTN 512
             P   D   VP+   K P      +  FK L+  QS +  +++E DE++L+ A T AGKT 
Sbjct:   150 PPDLDYVYVPLSEHKPPEEPARKYA-FK-LDPFQS-ISVASIERDESVLVSAHTSAGKTV 206

Query:   513 VA 514
             VA
Sbjct:   207 VA 208


>UNIPROTKB|F5H7E2 [details] [associations]
            symbol:SKIV2L2 "Superkiller viralicidic activity 2-like 2"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IDA] InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR025696
            Pfam:PF13234 HGNC:HGNC:18734 ChiTaRS:SKIV2L2 EMBL:AC010480
            EMBL:AC020728 IPI:IPI01011073 ProteinModelPortal:F5H7E2 SMR:F5H7E2
            Ensembl:ENST00000545714 UCSC:uc011cqi.2 ArrayExpress:F5H7E2
            Bgee:F5H7E2 Uniprot:F5H7E2
        Length = 941

 Score = 129 (50.5 bits), Expect = 3.9e-06, Sum P(4) = 3.9e-06
 Identities = 27/76 (35%), Positives = 46/76 (60%)

Query:  1032 VEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQMLGRA 1091
             +E LF++  I+ L +T T A G+N+PA TV+    + ++ +  RW+  G  + +QM GRA
Sbjct:   366 IEILFSEGLIKALFATETFAMGINMPARTVLFTNARKFDGKDFRWISSG--EYIQMSGRA 423

Query:  1092 GRPQYDTKGEGVLITN 1107
             GR   D +G  +L+ +
Sbjct:   424 GRRGMDDRGIVILMVD 439

 Score = 119 (46.9 bits), Expect = 4.0e-05, Sum P(4) = 4.0e-05
 Identities = 33/122 (27%), Positives = 62/122 (50%)

Query:   908 VYEKVMEHAGRNQLLVFVHSRKETGKTARAIRDMCLEKDTLGQFLREG-SASMEVLRTEA 966
             + + +ME      +++F  S+K+    A  +  +    D   + + E  S +++ L  E 
Sbjct:   276 IVKMIMER-NFQPVIIFSFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFSNAIDCLSDED 334

Query:   967 DQVKNGE-LRDLLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHT 1025
              ++   E +  LL  G  IHH G+  + +  +E LF++  I+ L +T T A G+N+PA T
Sbjct:   335 KKLPQVEHVLPLLKRGIGIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPART 394

Query:  1026 VV 1027
             V+
Sbjct:   395 VL 396

 Score = 71 (30.1 bits), Expect = 3.9e-06, Sum P(4) = 3.9e-06
 Identities = 29/79 (36%), Positives = 38/79 (48%)

Query:   559 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVAT-LLRI-KPET 615
             DEIH + D ERG V E  I           ++V  V LSAT+PN +  A  +  + K   
Sbjct:   151 DEIHYMRDSERGVVWEETII-------LLPDNVHYVFLSATIPNARQFAEWICHLHKQPC 203

Query:   616 GLFYFDNSFRPVALEQQYI 634
              + Y D  +RP  L Q YI
Sbjct:   204 HVIYTD--YRPTPL-QHYI 219

 Score = 71 (30.1 bits), Expect = 3.9e-06, Sum P(4) = 3.9e-06
 Identities = 29/79 (36%), Positives = 38/79 (48%)

Query:   815 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVAT-LLRI-KPET 871
             DEIH + D ERG V E  I           ++V  V LSAT+PN +  A  +  + K   
Sbjct:   151 DEIHYMRDSERGVVWEETII-------LLPDNVHYVFLSATIPNARQFAEWICHLHKQPC 203

Query:   872 GLFYFDNSFRPVALEQQYI 890
              + Y D  +RP  L Q YI
Sbjct:   204 HVIYTD--YRPTPL-QHYI 219

 Score = 51 (23.0 bits), Expect = 3.9e-06, Sum P(4) = 3.9e-06
 Identities = 16/45 (35%), Positives = 24/45 (53%)

Query:  1401 RVPKLGKTIHKYVHQFPKLELATHIQPITRSTLRVELTISPDFQW 1445
             ++ KLGK I +Y+H+ PK  L   +QP     ++ E     DF W
Sbjct:   531 QLAKLGKEIEEYIHK-PKYCLP-FLQPGRLVKVKNE---GDDFGW 570

 Score = 44 (20.5 bits), Expect = 3.9e-06, Sum P(4) = 3.9e-06
 Identities = 16/53 (30%), Positives = 29/53 (54%)

Query:   459 DETLVPIDKLPRYVQHAFEDFKTLNRIQSRLCKSALESDENLLLCAPTGAGKT 511
             +E  +P+   PR  + A E    L+  Q R     +++++++L+ A T AGKT
Sbjct:    18 EEDYLPLK--PRVGKAAKEYPFILDAFQ-REAIQCVDNNQSVLVSAHTSAGKT 67

 Score = 40 (19.1 bits), Expect = 9.6e-06, Sum P(4) = 9.6e-06
 Identities = 15/47 (31%), Positives = 20/47 (42%)

Query:    40 VCSLVGKLEGTRMGDRFMRTKPIKAEERKVKRQKRDEAQYDFTRMKG 86
             VC+        R   R + T PIKA   +  R+  +E Q D   M G
Sbjct:    68 VCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQ-DVGLMTG 113


>UNIPROTKB|F5H7B0 [details] [associations]
            symbol:SKIV2L "Helicase SKI2W" species:9606 "Homo sapiens"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 EMBL:AL662849 EMBL:AL645922
            InterPro:IPR025696 Pfam:PF13234 HGNC:HGNC:10898 ChiTaRS:SKIV2L
            IPI:IPI01021910 SMR:F5H7B0 Ensembl:ENST00000544581
            Ensembl:ENST00000546549 Uniprot:F5H7B0
        Length = 1053

 Score = 132 (51.5 bits), Expect = 5.0e-06, Sum P(4) = 5.0e-06
 Identities = 55/198 (27%), Positives = 92/198 (46%)

Query:   921 LLVFVHSRKETGKTARAIRDMCL----EKDTLGQFLREGSASMEVLRTEADQVKNGELRD 976
             ++VF  SR    + A  +  + L    EK  +  FL+   A +     +  QV +  + +
Sbjct:   376 VVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQRCLARLRGSDRQLPQVLH--MSE 433

Query:   977 LLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV-------DR 1029
             LL  G  +HH+G+  + + +VE LF+   ++VL +T T A GVN+PA TVV       D 
Sbjct:   434 LLNRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETFAMGVNMPARTVVFDSMRKHDG 493

Query:  1030 TLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQMLG 1089
             +   DL    ++Q+         G++ P  TVI+         KGR  E+  L  + M+G
Sbjct:   494 STFRDLLPGEYVQMAGRAGRR--GLD-PTGTVILLC-------KGRVPEMADLHRM-MMG 542

Query:  1090 RAGRPQYDTKGEGVLITN 1107
             +  + Q   +    +I N
Sbjct:   543 KPSQLQSQFRLTYTMILN 560

 Score = 72 (30.4 bits), Expect = 5.0e-06, Sum P(4) = 5.0e-06
 Identities = 27/94 (28%), Positives = 47/94 (50%)

Query:   559 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLL-RIKPETG 616
             DE+H ++D ERG V E ++           + V ++ LSAT+PN  + A  + R+K    
Sbjct:   230 DEVHYINDVERGVVWEEVLIML-------PDHVSIILLSATVPNALEFADWIGRLKRRQ- 281

Query:   617 LFYFDNSFRPVALEQQ-YIGVTEKKALKRFQVMN 649
             ++      RPV LE   + G + K   + F +++
Sbjct:   282 IYVISTVTRPVPLEHYLFTGNSSKTQGELFLLLD 315

 Score = 72 (30.4 bits), Expect = 5.0e-06, Sum P(4) = 5.0e-06
 Identities = 27/94 (28%), Positives = 47/94 (50%)

Query:   815 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLL-RIKPETG 872
             DE+H ++D ERG V E ++           + V ++ LSAT+PN  + A  + R+K    
Sbjct:   230 DEVHYINDVERGVVWEEVLIML-------PDHVSIILLSATVPNALEFADWIGRLKRRQ- 281

Query:   873 LFYFDNSFRPVALEQQ-YIGVTEKKALKRFQVMN 905
             ++      RPV LE   + G + K   + F +++
Sbjct:   282 IYVISTVTRPVPLEHYLFTGNSSKTQGELFLLLD 315

 Score = 50 (22.7 bits), Expect = 5.0e-06, Sum P(4) = 5.0e-06
 Identities = 31/115 (26%), Positives = 53/115 (46%)

Query:   444 EEVHVPALKPKPMGPDETLVPIDKLPRYVQHAFEDFKTLNRIQSRLCKSALESDENLLLC 503
             E+  +P     P+G    L+P    P + Q AFE    + + Q+ L    LE  +++ + 
Sbjct:    88 EQWAIPVDATSPVGDFYRLIP---QPAF-QWAFEP--DVFQKQAIL---HLERHDSVFVA 138

Query:   504 APTGAGKTNVA--LLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNF 556
             A T AGKT VA   + + Q   KH+           + IY +P+++L  +   +F
Sbjct:   139 AHTSAGKTVVAEYAIALAQ---KHMT----------RTIYTSPIKALSNQKFRDF 180

 Score = 42 (19.8 bits), Expect = 5.0e-06, Sum P(4) = 5.0e-06
 Identities = 7/17 (41%), Positives = 12/17 (70%)

Query:  1672 IDVSEYYSGGESDSDVE 1688
             +D+ EYYS GE  ++ +
Sbjct:   613 VDLPEYYSWGEELTETQ 629


>UNIPROTKB|F8VS23 [details] [associations]
            symbol:SKIV2L "Helicase SKI2W" species:9606 "Homo sapiens"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 EMBL:AL844853 EMBL:BX005143
            EMBL:CR759782 EMBL:CR753822 EMBL:CR753845 InterPro:IPR025696
            Pfam:PF13234 HGNC:HGNC:10898 ChiTaRS:SKIV2L IPI:IPI00945125
            SMR:F8VS23 Ensembl:ENST00000546908 Ensembl:ENST00000552714
            Ensembl:ENST00000552746 Ensembl:ENST00000553255 UCSC:uc011ghl.1
            Uniprot:F8VS23
        Length = 1053

 Score = 132 (51.5 bits), Expect = 5.0e-06, Sum P(4) = 5.0e-06
 Identities = 55/198 (27%), Positives = 92/198 (46%)

Query:   921 LLVFVHSRKETGKTARAIRDMCL----EKDTLGQFLREGSASMEVLRTEADQVKNGELRD 976
             ++VF  SR    + A  +  + L    EK  +  FL+   A +     +  QV +  + +
Sbjct:   376 VVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQRCLARLRGSDRQLPQVLH--MSE 433

Query:   977 LLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV-------DR 1029
             LL  G  +HH+G+  + + +VE LF+   ++VL +T T A GVN+PA TVV       D 
Sbjct:   434 LLNRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETFAMGVNMPARTVVFDSMRKHDG 493

Query:  1030 TLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQMLG 1089
             +   DL    ++Q+         G++ P  TVI+         KGR  E+  L  + M+G
Sbjct:   494 STFRDLLPGEYVQMAGRAGRR--GLD-PTGTVILLC-------KGRVPEMADLHRM-MMG 542

Query:  1090 RAGRPQYDTKGEGVLITN 1107
             +  + Q   +    +I N
Sbjct:   543 KPSQLQSQFRLTYTMILN 560

 Score = 72 (30.4 bits), Expect = 5.0e-06, Sum P(4) = 5.0e-06
 Identities = 27/94 (28%), Positives = 47/94 (50%)

Query:   559 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLL-RIKPETG 616
             DE+H ++D ERG V E ++           + V ++ LSAT+PN  + A  + R+K    
Sbjct:   230 DEVHYINDVERGVVWEEVLIML-------PDHVSIILLSATVPNALEFADWIGRLKRRQ- 281

Query:   617 LFYFDNSFRPVALEQQ-YIGVTEKKALKRFQVMN 649
             ++      RPV LE   + G + K   + F +++
Sbjct:   282 IYVISTVTRPVPLEHYLFTGNSSKTQGELFLLLD 315

 Score = 72 (30.4 bits), Expect = 5.0e-06, Sum P(4) = 5.0e-06
 Identities = 27/94 (28%), Positives = 47/94 (50%)

Query:   815 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLL-RIKPETG 872
             DE+H ++D ERG V E ++           + V ++ LSAT+PN  + A  + R+K    
Sbjct:   230 DEVHYINDVERGVVWEEVLIML-------PDHVSIILLSATVPNALEFADWIGRLKRRQ- 281

Query:   873 LFYFDNSFRPVALEQQ-YIGVTEKKALKRFQVMN 905
             ++      RPV LE   + G + K   + F +++
Sbjct:   282 IYVISTVTRPVPLEHYLFTGNSSKTQGELFLLLD 315

 Score = 50 (22.7 bits), Expect = 5.0e-06, Sum P(4) = 5.0e-06
 Identities = 31/115 (26%), Positives = 53/115 (46%)

Query:   444 EEVHVPALKPKPMGPDETLVPIDKLPRYVQHAFEDFKTLNRIQSRLCKSALESDENLLLC 503
             E+  +P     P+G    L+P    P + Q AFE    + + Q+ L    LE  +++ + 
Sbjct:    88 EQWAIPVDATSPVGDFYRLIP---QPAF-QWAFEP--DVFQKQAIL---HLERHDSVFVA 138

Query:   504 APTGAGKTNVA--LLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNF 556
             A T AGKT VA   + + Q   KH+           + IY +P+++L  +   +F
Sbjct:   139 AHTSAGKTVVAEYAIALAQ---KHMT----------RTIYTSPIKALSNQKFRDF 180

 Score = 42 (19.8 bits), Expect = 5.0e-06, Sum P(4) = 5.0e-06
 Identities = 7/17 (41%), Positives = 12/17 (70%)

Query:  1672 IDVSEYYSGGESDSDVE 1688
             +D+ EYYS GE  ++ +
Sbjct:   613 VDLPEYYSWGEELTETQ 629


>TAIR|locus:2063648 [details] [associations]
            symbol:HEN2 "hua enhancer 2" species:3702 "Arabidopsis
            thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;ISS]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
            [GO:0016817 "hydrolase activity, acting on acid anhydrides"
            evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
            anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
            [GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0010093
            "specification of floral organ identity" evidence=IMP] [GO:0016070
            "RNA metabolic process" evidence=TAS] [GO:0005829 "cytosol"
            evidence=IDA] [GO:0000278 "mitotic cell cycle" evidence=RCA]
            [GO:0000398 "mRNA splicing, via spliceosome" evidence=RCA]
            [GO:0003002 "regionalization" evidence=RCA] [GO:0006355 "regulation
            of transcription, DNA-dependent" evidence=RCA] [GO:0006396 "RNA
            processing" evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA]
            [GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009793 "embryo
            development ending in seed dormancy" evidence=RCA] [GO:0009845
            "seed germination" evidence=RCA] [GO:0009909 "regulation of flower
            development" evidence=RCA] [GO:0009933 "meristem structural
            organization" evidence=RCA] [GO:0010090 "trichome morphogenesis"
            evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
            [GO:0010182 "sugar mediated signaling pathway" evidence=RCA]
            [GO:0010228 "vegetative to reproductive phase transition of
            meristem" evidence=RCA] [GO:0010388 "cullin deneddylation"
            evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
            [GO:0016571 "histone methylation" evidence=RCA] [GO:0016579
            "protein deubiquitination" evidence=RCA] [GO:0019915 "lipid
            storage" evidence=RCA] [GO:0030422 "production of siRNA involved in
            RNA interference" evidence=RCA] [GO:0033043 "regulation of
            organelle organization" evidence=RCA] [GO:0035196 "production of
            miRNAs involved in gene silencing by miRNA" evidence=RCA]
            [GO:0043687 "post-translational protein modification" evidence=RCA]
            [GO:0045010 "actin nucleation" evidence=RCA] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=RCA]
            [GO:0048449 "floral organ formation" evidence=RCA] [GO:0050826
            "response to freezing" evidence=RCA] InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005829 GO:GO:0005524
            GO:GO:0005634 EMBL:CP002685 GO:GO:0003676 GO:GO:0010093
            GO:GO:0016070 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 EMBL:AC005171 GO:GO:0003724 HOGENOM:HOG000163047
            KO:K12598 InterPro:IPR025696 Pfam:PF13234 EMBL:BT005794
            IPI:IPI00539432 PIR:B84481 RefSeq:NP_565338.1 UniGene:At.20667
            ProteinModelPortal:Q9ZVW2 SMR:Q9ZVW2 IntAct:Q9ZVW2 PRIDE:Q9ZVW2
            EnsemblPlants:AT2G06990.1 GeneID:815269 KEGG:ath:AT2G06990
            TAIR:At2g06990 InParanoid:Q9ZVW2 OMA:TFDRVCD PhylomeDB:Q9ZVW2
            ProtClustDB:CLSN2688028 ArrayExpress:Q9ZVW2 Genevestigator:Q9ZVW2
            Uniprot:Q9ZVW2
        Length = 995

 Score = 135 (52.6 bits), Expect = 5.2e-06, Sum P(3) = 5.2e-06
 Identities = 41/135 (30%), Positives = 70/135 (51%)

Query:   908 VYEKVMEHAGRNQLLVFVHSRKETGKTARAIRDMCLEKDTLGQFLREG-SASMEVLRTEA 966
             + + +ME      +++F  SR+E  + A ++  +    D   + + +  + +M+ L  E 
Sbjct:   327 IVKMIMERKFE-PVIIFSFSRRECEQHALSMSKLDFNTDEEKEVVEQVFNNAMQCLNEED 385

Query:   967 DQVKNGELR-DLLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHT 1025
               +   EL   LL  G A+HH+G+  V + LVE LF +  ++ L +T T A G+N+PA T
Sbjct:   386 RSLPAIELMLPLLQRGIAVHHSGLLPVIKELVELLFQEGLVKALFATETFAMGLNMPAKT 445

Query:  1026 VVDRTLVEDLFADRH 1040
             VV  T V+    D H
Sbjct:   446 VVF-TAVKKWDGDSH 459

 Score = 118 (46.6 bits), Expect = 0.00028, Sum P(3) = 0.00028
 Identities = 27/74 (36%), Positives = 45/74 (60%)

Query:  1027 VDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQ 1086
             V + LVE LF +  ++ L +T T A G+N+PA TV+    + ++ +  R++  G+ + +Q
Sbjct:   412 VIKELVELLFQEGLVKALFATETFAMGLNMPAKTVVFTAVKKWDGDSHRYI--GSGEYIQ 469

Query:  1087 MLGRAGRPQYDTKG 1100
             M GRAGR   D +G
Sbjct:   470 MSGRAGRRGKDERG 483

 Score = 58 (25.5 bits), Expect = 5.2e-06, Sum P(3) = 5.2e-06
 Identities = 22/70 (31%), Positives = 36/70 (51%)

Query:   479 FKTLNRIQSRLCKSALESDENLLLCAPTGAGKTNVALLCMLQEIGKHINADGTINADEFK 538
             FK L+  QS +  + LE  E++L+ A T AGKT VA   +                D+ +
Sbjct:    80 FK-LDPFQS-VSVACLERKESILVSAHTSAGKTAVAEYAIAMAF-----------RDKQR 126

Query:   539 IIYVAPMRSL 548
             +IY +P+++L
Sbjct:   127 VIYTSPLKAL 136

 Score = 57 (25.1 bits), Expect = 5.2e-06, Sum P(3) = 5.2e-06
 Identities = 27/78 (34%), Positives = 36/78 (46%)

Query:   559 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRI--KPET 615
             DEIH + D ERG V E        +I      +++V LSAT+ N  + A  +    K   
Sbjct:   194 DEIHYMKDRERGVVWE-------ESIIFLPPAIKMVFLSATMSNATEFAEWICYLHKQPC 246

Query:   616 GLFYFDNSFRPVALEQQY 633
              + Y D  FRP  L Q Y
Sbjct:   247 HVVYTD--FRPTPL-QHY 261

 Score = 57 (25.1 bits), Expect = 5.2e-06, Sum P(3) = 5.2e-06
 Identities = 27/78 (34%), Positives = 36/78 (46%)

Query:   815 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRI--KPET 871
             DEIH + D ERG V E        +I      +++V LSAT+ N  + A  +    K   
Sbjct:   194 DEIHYMKDRERGVVWE-------ESIIFLPPAIKMVFLSATMSNATEFAEWICYLHKQPC 246

Query:   872 GLFYFDNSFRPVALEQQY 889
              + Y D  FRP  L Q Y
Sbjct:   247 HVVYTD--FRPTPL-QHY 261

 Score = 37 (18.1 bits), Expect = 0.00061, Sum P(3) = 0.00061
 Identities = 5/14 (35%), Positives = 12/14 (85%)

Query:   791 DEFKIIYVAPMRSL 804
             D+ ++IY +P+++L
Sbjct:   123 DKQRVIYTSPLKAL 136


>UNIPROTKB|B4DM01 [details] [associations]
            symbol:SKIV2L "cDNA FLJ57529, highly similar to Helicase
            SKI2W (EC 3.6.1.-)" species:9606 "Homo sapiens" [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 EMBL:AL662849 eggNOG:COG4581
            InterPro:IPR025696 Pfam:PF13234 UniGene:Hs.89864 HGNC:HGNC:10898
            HOVERGEN:HBG060025 OrthoDB:EOG47H5P5 ChiTaRS:SKIV2L EMBL:AK297230
            IPI:IPI01014021 SMR:B4DM01 STRING:B4DM01 Ensembl:ENST00000551164
            Uniprot:B4DM01
        Length = 1088

 Score = 132 (51.5 bits), Expect = 5.8e-06, Sum P(4) = 5.8e-06
 Identities = 55/198 (27%), Positives = 92/198 (46%)

Query:   921 LLVFVHSRKETGKTARAIRDMCL----EKDTLGQFLREGSASMEVLRTEADQVKNGELRD 976
             ++VF  SR    + A  +  + L    EK  +  FL+   A +     +  QV +  + +
Sbjct:   411 VVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQRCLARLRGSDRQLPQVLH--MSE 468

Query:   977 LLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV-------DR 1029
             LL  G  +HH+G+  + + +VE LF+   ++VL +T T A GVN+PA TVV       D 
Sbjct:   469 LLNRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETFAMGVNMPARTVVFDSMRKHDG 528

Query:  1030 TLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQMLG 1089
             +   DL    ++Q+         G++ P  TVI+         KGR  E+  L  + M+G
Sbjct:   529 STFRDLLPGEYVQMAGRAGRR--GLD-PTGTVILLC-------KGRVPEMADLHRM-MMG 577

Query:  1090 RAGRPQYDTKGEGVLITN 1107
             +  + Q   +    +I N
Sbjct:   578 KPSQLQSQFRLTYTMILN 595

 Score = 72 (30.4 bits), Expect = 5.8e-06, Sum P(4) = 5.8e-06
 Identities = 27/94 (28%), Positives = 47/94 (50%)

Query:   559 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLL-RIKPETG 616
             DE+H ++D ERG V E ++           + V ++ LSAT+PN  + A  + R+K    
Sbjct:   265 DEVHYINDVERGVVWEEVLIML-------PDHVSIILLSATVPNALEFADWIGRLKRRQ- 316

Query:   617 LFYFDNSFRPVALEQQ-YIGVTEKKALKRFQVMN 649
             ++      RPV LE   + G + K   + F +++
Sbjct:   317 IYVISTVTRPVPLEHYLFTGNSSKTQGELFLLLD 350

 Score = 72 (30.4 bits), Expect = 5.8e-06, Sum P(4) = 5.8e-06
 Identities = 27/94 (28%), Positives = 47/94 (50%)

Query:   815 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLL-RIKPETG 872
             DE+H ++D ERG V E ++           + V ++ LSAT+PN  + A  + R+K    
Sbjct:   265 DEVHYINDVERGVVWEEVLIML-------PDHVSIILLSATVPNALEFADWIGRLKRRQ- 316

Query:   873 LFYFDNSFRPVALEQQ-YIGVTEKKALKRFQVMN 905
             ++      RPV LE   + G + K   + F +++
Sbjct:   317 IYVISTVTRPVPLEHYLFTGNSSKTQGELFLLLD 350

 Score = 50 (22.7 bits), Expect = 5.8e-06, Sum P(4) = 5.8e-06
 Identities = 31/115 (26%), Positives = 53/115 (46%)

Query:   444 EEVHVPALKPKPMGPDETLVPIDKLPRYVQHAFEDFKTLNRIQSRLCKSALESDENLLLC 503
             E+  +P     P+G    L+P    P + Q AFE    + + Q+ L    LE  +++ + 
Sbjct:   123 EQWAIPVDATSPVGDFYRLIP---QPAF-QWAFEP--DVFQKQAIL---HLERHDSVFVA 173

Query:   504 APTGAGKTNVA--LLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNF 556
             A T AGKT VA   + + Q   KH+           + IY +P+++L  +   +F
Sbjct:   174 AHTSAGKTVVAEYAIALAQ---KHMT----------RTIYTSPIKALSNQKFRDF 215

 Score = 42 (19.8 bits), Expect = 5.8e-06, Sum P(4) = 5.8e-06
 Identities = 7/17 (41%), Positives = 12/17 (70%)

Query:  1672 IDVSEYYSGGESDSDVE 1688
             +D+ EYYS GE  ++ +
Sbjct:   648 VDLPEYYSWGEELTETQ 664


>UNIPROTKB|F8VNU1 [details] [associations]
            symbol:SKIV2L "Helicase SKI2W" species:9606 "Homo sapiens"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 EMBL:AL844853 EMBL:BX005143
            EMBL:CR759782 EMBL:CR753822 EMBL:CR753845 InterPro:IPR025696
            Pfam:PF13234 HGNC:HGNC:10898 ChiTaRS:SKIV2L IPI:IPI01022196
            SMR:F8VNU1 Ensembl:ENST00000546742 Ensembl:ENST00000547054
            Ensembl:ENST00000550012 Ensembl:ENST00000550640 UCSC:uc011ghk.1
            Uniprot:F8VNU1
        Length = 1088

 Score = 132 (51.5 bits), Expect = 5.8e-06, Sum P(4) = 5.8e-06
 Identities = 55/198 (27%), Positives = 92/198 (46%)

Query:   921 LLVFVHSRKETGKTARAIRDMCL----EKDTLGQFLREGSASMEVLRTEADQVKNGELRD 976
             ++VF  SR    + A  +  + L    EK  +  FL+   A +     +  QV +  + +
Sbjct:   411 VVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQRCLARLRGSDRQLPQVLH--MSE 468

Query:   977 LLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV-------DR 1029
             LL  G  +HH+G+  + + +VE LF+   ++VL +T T A GVN+PA TVV       D 
Sbjct:   469 LLNRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETFAMGVNMPARTVVFDSMRKHDG 528

Query:  1030 TLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQMLG 1089
             +   DL    ++Q+         G++ P  TVI+         KGR  E+  L  + M+G
Sbjct:   529 STFRDLLPGEYVQMAGRAGRR--GLD-PTGTVILLC-------KGRVPEMADLHRM-MMG 577

Query:  1090 RAGRPQYDTKGEGVLITN 1107
             +  + Q   +    +I N
Sbjct:   578 KPSQLQSQFRLTYTMILN 595

 Score = 72 (30.4 bits), Expect = 5.8e-06, Sum P(4) = 5.8e-06
 Identities = 27/94 (28%), Positives = 47/94 (50%)

Query:   559 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLL-RIKPETG 616
             DE+H ++D ERG V E ++           + V ++ LSAT+PN  + A  + R+K    
Sbjct:   265 DEVHYINDVERGVVWEEVLIML-------PDHVSIILLSATVPNALEFADWIGRLKRRQ- 316

Query:   617 LFYFDNSFRPVALEQQ-YIGVTEKKALKRFQVMN 649
             ++      RPV LE   + G + K   + F +++
Sbjct:   317 IYVISTVTRPVPLEHYLFTGNSSKTQGELFLLLD 350

 Score = 72 (30.4 bits), Expect = 5.8e-06, Sum P(4) = 5.8e-06
 Identities = 27/94 (28%), Positives = 47/94 (50%)

Query:   815 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLL-RIKPETG 872
             DE+H ++D ERG V E ++           + V ++ LSAT+PN  + A  + R+K    
Sbjct:   265 DEVHYINDVERGVVWEEVLIML-------PDHVSIILLSATVPNALEFADWIGRLKRRQ- 316

Query:   873 LFYFDNSFRPVALEQQ-YIGVTEKKALKRFQVMN 905
             ++      RPV LE   + G + K   + F +++
Sbjct:   317 IYVISTVTRPVPLEHYLFTGNSSKTQGELFLLLD 350

 Score = 50 (22.7 bits), Expect = 5.8e-06, Sum P(4) = 5.8e-06
 Identities = 31/115 (26%), Positives = 53/115 (46%)

Query:   444 EEVHVPALKPKPMGPDETLVPIDKLPRYVQHAFEDFKTLNRIQSRLCKSALESDENLLLC 503
             E+  +P     P+G    L+P    P + Q AFE    + + Q+ L    LE  +++ + 
Sbjct:   123 EQWAIPVDATSPVGDFYRLIP---QPAF-QWAFEP--DVFQKQAIL---HLERHDSVFVA 173

Query:   504 APTGAGKTNVA--LLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNF 556
             A T AGKT VA   + + Q   KH+           + IY +P+++L  +   +F
Sbjct:   174 AHTSAGKTVVAEYAIALAQ---KHMT----------RTIYTSPIKALSNQKFRDF 215

 Score = 42 (19.8 bits), Expect = 5.8e-06, Sum P(4) = 5.8e-06
 Identities = 7/17 (41%), Positives = 12/17 (70%)

Query:  1672 IDVSEYYSGGESDSDVE 1688
             +D+ EYYS GE  ++ +
Sbjct:   648 VDLPEYYSWGEELTETQ 664


>TAIR|locus:2020573 [details] [associations]
            symbol:EMB25 "EMBRYO DEFECTIVE 25" species:3702
            "Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA;ISS] [GO:0009507 "chloroplast"
            evidence=ISM;IDA] [GO:0016818 "hydrolase activity, acting on acid
            anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
            [GO:0009793 "embryo development ending in seed dormancy"
            evidence=IMP] [GO:0010497 "plasmodesmata-mediated intercellular
            transport" evidence=NAS;IMP] [GO:0003724 "RNA helicase activity"
            evidence=ISS] [GO:0010494 "cytoplasmic stress granule"
            evidence=IDA] [GO:0016441 "posttranscriptional gene silencing"
            evidence=IMP] [GO:0009570 "chloroplast stroma" evidence=IDA]
            [GO:0016556 "mRNA modification" evidence=RCA] InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012961 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08148 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0009570 GO:GO:0003676
            GO:GO:0009793 GO:GO:0031047 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0010494 GO:GO:0008026 EMBL:AC002062
            GO:GO:0003724 GO:GO:0010497 eggNOG:COG4581 GO:GO:0016441
            HOGENOM:HOG000245391 EMBL:AK316759 EMBL:AF387007 IPI:IPI00538730
            PIR:D96723 RefSeq:NP_177164.1 UniGene:At.35348
            ProteinModelPortal:B9DFG3 SMR:B9DFG3 PaxDb:B9DFG3 PRIDE:B9DFG3
            EnsemblPlants:AT1G70070.1 GeneID:843343 KEGG:ath:AT1G70070
            GeneFarm:2280 TAIR:At1g70070 InParanoid:Q94EZ6 OMA:PSYGMVL
            PhylomeDB:B9DFG3 ProtClustDB:CLSN2682754 Genevestigator:B9DFG3
            Uniprot:B9DFG3
        Length = 1171

 Score = 132 (51.5 bits), Expect = 5.8e-06, Sum P(3) = 5.8e-06
 Identities = 41/130 (31%), Positives = 67/130 (51%)

Query:  1029 RTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQML 1088
             ++ +E+LF    ++V+ +T TLA G+N+PA T +I  + +        +ELG  ++ QM 
Sbjct:   510 KSFIEELFQRGLVKVVFATETLAAGINMPARTAVI--SSLSKKAGNERIELGPNELYQMA 567

Query:  1089 GRAGRPQYDTKGEGVLITNHSE-LQYYLSLLNHQL-PVESQMISKLPDMLNAEIVLGTVQ 1146
             GRAGR   D KG  VL+    E  +    L+   + P+ SQ  +    +LN  +V G+  
Sbjct:   568 GRAGRRGIDEKGYTVLVQTAFEGAEECCKLVFAGVKPLVSQFTASYGMVLN--LVAGSKV 625

Query:  1147 NLKDAVTWLG 1156
               K + T  G
Sbjct:   626 TRKSSGTEAG 635

 Score = 119 (46.9 bits), Expect = 0.00012, Sum P(3) = 0.00012
 Identities = 41/158 (25%), Positives = 73/158 (46%)

Query:   877 DNSFRPVALEQQY-IGVTEKKALKRFQVMNDIVYEKVMEHAGRNQL--LVFVHSRKETGK 933
             D S+  +     Y +   E   ++R QV    + + +    G+N L  + F+ +R+    
Sbjct:   395 DTSYNNLVNVTDYPLSKNEINKIRRSQVPQ--ISDTLWHLQGKNMLPAIWFIFNRRGCDA 452

Query:   934 TARAIRDMCLEKDTLGQFLREGSASMEVLRTEADQVKNGELRDLLPYGFAIHHAGMTRVD 993
               + + +  L  D     +        VL  +A  V+    + LL  G A HHAG   + 
Sbjct:   453 AVQYVENFQLLDDCEKSEVELALKKFRVLYPDA--VRESAEKGLLR-GIAAHHAGCLPLW 509

Query:   994 RTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVVDRTL 1031
             ++ +E+LF    ++V+ +T TLA G+N+PA T V  +L
Sbjct:   510 KSFIEELFQRGLVKVVFATETLAAGINMPARTAVISSL 547

 Score = 61 (26.5 bits), Expect = 5.8e-06, Sum P(3) = 5.8e-06
 Identities = 24/91 (26%), Positives = 43/91 (47%)

Query:   478 DFKTLNRIQSRLCKSALESDENLLLCAPTGAGKTNVALLCMLQEIGKHINADGTINADEF 537
             DF+ +++ Q RL   A     ++++ APT +GKT +A    +  + K     G       
Sbjct:   152 DFR-IDKFQ-RLAIEAFLRGSSVVVSAPTSSGKTLIAEAAAVSTVAK-----GR------ 198

Query:   538 KIIYVAPMRSL----VQEMVGNFGKDEIHLL 564
             ++ Y  P+++L     +E    FG D + LL
Sbjct:   199 RLFYTTPLKALSNQKFREFRETFGDDNVGLL 229

 Score = 59 (25.8 bits), Expect = 5.8e-06, Sum P(3) = 5.8e-06
 Identities = 26/73 (35%), Positives = 39/73 (53%)

Query:   559 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLL-RIKPETG 616
             DE+H L D  RG V E ++      I   +E V+L+ LSAT+ N  ++A  +  I  +T 
Sbjct:   275 DEVHYLSDISRGTVWEEIV------IYCPKE-VQLICLSATVANPDELAGWIGEIHGKTE 327

Query:   617 LFYFDNSFRPVAL 629
             L    ++ RPV L
Sbjct:   328 LV--TSTRRPVPL 338

 Score = 59 (25.8 bits), Expect = 5.8e-06, Sum P(3) = 5.8e-06
 Identities = 26/73 (35%), Positives = 39/73 (53%)

Query:   815 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLL-RIKPETG 872
             DE+H L D  RG V E ++      I   +E V+L+ LSAT+ N  ++A  +  I  +T 
Sbjct:   275 DEVHYLSDISRGTVWEEIV------IYCPKE-VQLICLSATVANPDELAGWIGEIHGKTE 327

Query:   873 LFYFDNSFRPVAL 885
             L    ++ RPV L
Sbjct:   328 LV--TSTRRPVPL 338


>UNIPROTKB|P42285 [details] [associations]
            symbol:SKIV2L2 "Superkiller viralicidic activity 2-like 2"
            species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730
            "nucleolus" evidence=IEA] [GO:0071013 "catalytic step 2
            spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
            spliceosome" evidence=IC] [GO:0000178 "exosome (RNase complex)"
            evidence=IDA] [GO:0000460 "maturation of 5.8S rRNA" evidence=IMP]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
            evidence=IDA] InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0005730 GO:GO:0003676 GO:GO:0000398
            GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0000460 GO:GO:0008026 eggNOG:COG4581 HOGENOM:HOG000163047
            KO:K12598 OMA:ENFQKAM InterPro:IPR025696 Pfam:PF13234 EMBL:D29641
            EMBL:BX640789 EMBL:BC014669 EMBL:BC028604 EMBL:BC031779
            EMBL:BC065258 EMBL:BC104996 EMBL:BC113509 IPI:IPI00647217
            RefSeq:NP_056175.3 UniGene:Hs.274531 ProteinModelPortal:P42285
            SMR:P42285 IntAct:P42285 STRING:P42285 PhosphoSite:P42285
            DMDM:71153172 SWISS-2DPAGE:P42285 PaxDb:P42285 PeptideAtlas:P42285
            PRIDE:P42285 DNASU:23517 Ensembl:ENST00000230640 GeneID:23517
            KEGG:hsa:23517 UCSC:uc003jpy.4 CTD:23517 GeneCards:GC05P054605
            HGNC:HGNC:18734 HPA:HPA037379 neXtProt:NX_P42285
            PharmGKB:PA134901921 HOVERGEN:HBG104255 InParanoid:P42285
            OrthoDB:EOG4D52WW PhylomeDB:P42285 ChiTaRS:SKIV2L2 GenomeRNAi:23517
            NextBio:45957 ArrayExpress:P42285 Bgee:P42285 CleanEx:HS_SKIV2L2
            Genevestigator:P42285 GermOnline:ENSG00000039123 Uniprot:P42285
        Length = 1042

 Score = 129 (50.5 bits), Expect = 6.2e-06, Sum P(4) = 6.2e-06
 Identities = 27/76 (35%), Positives = 46/76 (60%)

Query:  1032 VEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQMLGRA 1091
             +E LF++  I+ L +T T A G+N+PA TV+    + ++ +  RW+  G  + +QM GRA
Sbjct:   467 IEILFSEGLIKALFATETFAMGINMPARTVLFTNARKFDGKDFRWISSG--EYIQMSGRA 524

Query:  1092 GRPQYDTKGEGVLITN 1107
             GR   D +G  +L+ +
Sbjct:   525 GRRGMDDRGIVILMVD 540

 Score = 119 (46.9 bits), Expect = 6.1e-05, Sum P(4) = 6.1e-05
 Identities = 33/122 (27%), Positives = 62/122 (50%)

Query:   908 VYEKVMEHAGRNQLLVFVHSRKETGKTARAIRDMCLEKDTLGQFLREG-SASMEVLRTEA 966
             + + +ME      +++F  S+K+    A  +  +    D   + + E  S +++ L  E 
Sbjct:   377 IVKMIMER-NFQPVIIFSFSKKDCEAYALQMTKLDFNTDEEKKMVEEVFSNAIDCLSDED 435

Query:   967 DQVKNGE-LRDLLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHT 1025
              ++   E +  LL  G  IHH G+  + +  +E LF++  I+ L +T T A G+N+PA T
Sbjct:   436 KKLPQVEHVLPLLKRGIGIHHGGLLPILKETIEILFSEGLIKALFATETFAMGINMPART 495

Query:  1026 VV 1027
             V+
Sbjct:   496 VL 497

 Score = 71 (30.1 bits), Expect = 6.2e-06, Sum P(4) = 6.2e-06
 Identities = 29/79 (36%), Positives = 38/79 (48%)

Query:   559 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVAT-LLRI-KPET 615
             DEIH + D ERG V E  I           ++V  V LSAT+PN +  A  +  + K   
Sbjct:   252 DEIHYMRDSERGVVWEETII-------LLPDNVHYVFLSATIPNARQFAEWICHLHKQPC 304

Query:   616 GLFYFDNSFRPVALEQQYI 634
              + Y D  +RP  L Q YI
Sbjct:   305 HVIYTD--YRPTPL-QHYI 320

 Score = 71 (30.1 bits), Expect = 6.2e-06, Sum P(4) = 6.2e-06
 Identities = 29/79 (36%), Positives = 38/79 (48%)

Query:   815 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVAT-LLRI-KPET 871
             DEIH + D ERG V E  I           ++V  V LSAT+PN +  A  +  + K   
Sbjct:   252 DEIHYMRDSERGVVWEETII-------LLPDNVHYVFLSATIPNARQFAEWICHLHKQPC 304

Query:   872 GLFYFDNSFRPVALEQQYI 890
              + Y D  +RP  L Q YI
Sbjct:   305 HVIYTD--YRPTPL-QHYI 320

 Score = 51 (23.0 bits), Expect = 6.2e-06, Sum P(4) = 6.2e-06
 Identities = 16/45 (35%), Positives = 24/45 (53%)

Query:  1401 RVPKLGKTIHKYVHQFPKLELATHIQPITRSTLRVELTISPDFQW 1445
             ++ KLGK I +Y+H+ PK  L   +QP     ++ E     DF W
Sbjct:   632 QLAKLGKEIEEYIHK-PKYCLP-FLQPGRLVKVKNE---GDDFGW 671

 Score = 44 (20.5 bits), Expect = 6.2e-06, Sum P(4) = 6.2e-06
 Identities = 16/53 (30%), Positives = 29/53 (54%)

Query:   459 DETLVPIDKLPRYVQHAFEDFKTLNRIQSRLCKSALESDENLLLCAPTGAGKT 511
             +E  +P+   PR  + A E    L+  Q R     +++++++L+ A T AGKT
Sbjct:   119 EEDYLPLK--PRVGKAAKEYPFILDAFQ-REAIQCVDNNQSVLVSAHTSAGKT 168

 Score = 40 (19.1 bits), Expect = 1.5e-05, Sum P(4) = 1.5e-05
 Identities = 15/47 (31%), Positives = 20/47 (42%)

Query:    40 VCSLVGKLEGTRMGDRFMRTKPIKAEERKVKRQKRDEAQYDFTRMKG 86
             VC+        R   R + T PIKA   +  R+  +E Q D   M G
Sbjct:   169 VCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQ-DVGLMTG 214


>UNIPROTKB|F1RQW4 [details] [associations]
            symbol:SKIV2L "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0055087 "Ski complex" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR025696 Pfam:PF13234
            GO:GO:0055087 OMA:TRLDETC GeneTree:ENSGT00690000102154
            EMBL:CT956038 Ensembl:ENSSSCT00000001566 ArrayExpress:F1RQW4
            Uniprot:F1RQW4
        Length = 1246

 Score = 134 (52.2 bits), Expect = 6.6e-06, Sum P(4) = 6.6e-06
 Identities = 58/203 (28%), Positives = 94/203 (46%)

Query:   918 RNQL--LVFVHSRKETGKTARAIRDMCL----EKDTLGQFLREGSASMEVLRTEADQVKN 971
             R QL  +VF  SR    + A  +  + L    EK  +  FL+   A +     +  QV +
Sbjct:   564 REQLPVVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQRCLARLRGSDRQLPQVLH 623

Query:   972 GELRDLLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV---- 1027
               + +LL  G  +HH+G+  + + +VE LF+   ++VL +T T A GVN+PA TVV    
Sbjct:   624 --MSELLHRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETFAMGVNMPARTVVFDSM 681

Query:  1028 ---DRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDV 1084
                D +   DL    ++Q+         G++ P  TVI+         KGR  E+  L  
Sbjct:   682 RKHDGSTFRDLLPGEYVQMAGRAGRR--GLD-PTGTVILLC-------KGRVPEMADLHR 731

Query:  1085 LQMLGRAGRPQYDTKGEGVLITN 1107
             + M+G+  + Q   +    +I N
Sbjct:   732 M-MMGKPSQLQSQFRLTYTMILN 753

 Score = 71 (30.1 bits), Expect = 6.6e-06, Sum P(4) = 6.6e-06
 Identities = 27/94 (28%), Positives = 47/94 (50%)

Query:   559 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLL-RIKPETG 616
             DE+H ++D ERG V E ++           + V ++ LSAT+PN  + A  + R+K    
Sbjct:   423 DEVHYINDAERGVVWEEVLIML-------PDHVSIILLSATVPNALEFADWIGRLKRRQ- 474

Query:   617 LFYFDNSFRPVALEQQ-YIGVTEKKALKRFQVMN 649
             ++      RPV LE   + G + K   + F +++
Sbjct:   475 IYVISTVARPVPLEHYLFTGNSPKTQGELFLLLD 508

 Score = 71 (30.1 bits), Expect = 6.6e-06, Sum P(4) = 6.6e-06
 Identities = 27/94 (28%), Positives = 47/94 (50%)

Query:   815 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLL-RIKPETG 872
             DE+H ++D ERG V E ++           + V ++ LSAT+PN  + A  + R+K    
Sbjct:   423 DEVHYINDAERGVVWEEVLIML-------PDHVSIILLSATVPNALEFADWIGRLKRRQ- 474

Query:   873 LFYFDNSFRPVALEQQ-YIGVTEKKALKRFQVMN 905
             ++      RPV LE   + G + K   + F +++
Sbjct:   475 IYVISTVARPVPLEHYLFTGNSPKTQGELFLLLD 508

 Score = 52 (23.4 bits), Expect = 6.6e-06, Sum P(4) = 6.6e-06
 Identities = 31/117 (26%), Positives = 52/117 (44%)

Query:   449 PALKPKPMGPDETLVPIDKL-P-----RYV-QHAFEDFKTLNRIQSRLCKSALESDENLL 501
             P   PKP   +E  +P+D   P     R + Q AF+     +  Q +     LE  +++ 
Sbjct:   271 PREPPKPPPQEEWAIPVDVTSPVGDFYRLIPQPAFQWAFEPDVFQKQAILH-LERHDSVF 329

Query:   502 LCAPTGAGKTNVA--LLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNF 556
             + A T AGKT VA   + + Q   KH+           + IY +P+++L  +   +F
Sbjct:   330 VAAHTSAGKTVVAEYAIALAQ---KHMT----------RTIYTSPIKALSNQKFRDF 373

 Score = 41 (19.5 bits), Expect = 6.6e-06, Sum P(4) = 6.6e-06
 Identities = 7/11 (63%), Positives = 9/11 (81%)

Query:  1672 IDVSEYYSGGE 1682
             +D+ EYYS GE
Sbjct:   806 VDLPEYYSWGE 816


>UNIPROTKB|E2RSD6 [details] [associations]
            symbol:SKIV2L "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0055087 "Ski complex" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR025696 Pfam:PF13234
            GO:GO:0055087 KO:K12599 OMA:TRLDETC GeneTree:ENSGT00690000102154
            CTD:6499 EMBL:AAEX03008222 RefSeq:XP_538841.2
            ProteinModelPortal:E2RSD6 Ensembl:ENSCAFT00000001053 GeneID:481720
            KEGG:cfa:481720 NextBio:20856463 Uniprot:E2RSD6
        Length = 1246

 Score = 132 (51.5 bits), Expect = 6.7e-06, Sum P(4) = 6.7e-06
 Identities = 55/198 (27%), Positives = 92/198 (46%)

Query:   921 LLVFVHSRKETGKTARAIRDMCL----EKDTLGQFLREGSASMEVLRTEADQVKNGELRD 976
             ++VF  SR    + A  +  + L    EK  +  FL+   A +     +  QV +  + +
Sbjct:   569 VVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQRCLARLRGSDRQLPQVLH--MSE 626

Query:   977 LLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV-------DR 1029
             LL  G  +HH+G+  + + +VE LF+   ++VL +T T A GVN+PA TVV       D 
Sbjct:   627 LLHRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETFAMGVNMPARTVVFDSMRKHDG 686

Query:  1030 TLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQMLG 1089
             +   DL    ++Q+         G++ P  TVI+         KGR  E+  L  + M+G
Sbjct:   687 STFRDLLPGEYVQMAGRAGRR--GLD-PTGTVILLC-------KGRVPEMADLHRM-MMG 735

Query:  1090 RAGRPQYDTKGEGVLITN 1107
             +  + Q   +    +I N
Sbjct:   736 KPSQLQSQFRLTYTMILN 753

 Score = 71 (30.1 bits), Expect = 6.7e-06, Sum P(4) = 6.7e-06
 Identities = 27/94 (28%), Positives = 47/94 (50%)

Query:   559 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLL-RIKPETG 616
             DE+H ++D ERG V E ++           + V ++ LSAT+PN  + A  + R+K    
Sbjct:   423 DEVHYINDAERGVVWEEVLIML-------PDHVSIILLSATVPNALEFADWIGRLKRRQ- 474

Query:   617 LFYFDNSFRPVALEQQ-YIGVTEKKALKRFQVMN 649
             ++      RPV LE   + G + K   + F +++
Sbjct:   475 IYVISTVARPVPLEHYLFTGNSPKTQGELFLLLD 508

 Score = 71 (30.1 bits), Expect = 6.7e-06, Sum P(4) = 6.7e-06
 Identities = 27/94 (28%), Positives = 47/94 (50%)

Query:   815 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLL-RIKPETG 872
             DE+H ++D ERG V E ++           + V ++ LSAT+PN  + A  + R+K    
Sbjct:   423 DEVHYINDAERGVVWEEVLIML-------PDHVSIILLSATVPNALEFADWIGRLKRRQ- 474

Query:   873 LFYFDNSFRPVALEQQ-YIGVTEKKALKRFQVMN 905
             ++      RPV LE   + G + K   + F +++
Sbjct:   475 IYVISTVARPVPLEHYLFTGNSPKTQGELFLLLD 508

 Score = 53 (23.7 bits), Expect = 6.7e-06, Sum P(4) = 6.7e-06
 Identities = 31/118 (26%), Positives = 55/118 (46%)

Query:   449 PALKPKPMGPDETLVPIDKL-P-----RYV-QHAFE-DFKTLNRIQSRLCKSALESDENL 500
             P   PKP+  ++  +P+D   P     R + Q AF+  F+  +  Q +     LE  +++
Sbjct:   271 PPEPPKPVPQEQWAIPVDVTSPVGDFYRLIPQPAFQWSFEP-DVFQKQAILH-LERHDSV 328

Query:   501 LLCAPTGAGKTNVA--LLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNF 556
              + A T AGKT VA   + + Q   KH+           + IY +P+++L  +   +F
Sbjct:   329 FVAAHTSAGKTVVAEYAIALAQ---KHMT----------RTIYTSPIKALSNQKFRDF 373

 Score = 42 (19.8 bits), Expect = 6.7e-06, Sum P(4) = 6.7e-06
 Identities = 7/11 (63%), Positives = 9/11 (81%)

Query:  1672 IDVSEYYSGGE 1682
             +D+SEYY  GE
Sbjct:   806 VDLSEYYGWGE 816


>UNIPROTKB|Q15477 [details] [associations]
            symbol:SKIV2L "Helicase SKI2W" species:9606 "Homo sapiens"
            [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0055087 "Ski
            complex" evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase
            activity" evidence=TAS] Reactome:REACT_17015 InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0004004 EMBL:AF019413 EMBL:AL662849 EMBL:AL645922
            eggNOG:COG4581 InterPro:IPR025696 Pfam:PF13234 GO:GO:0055087
            HOGENOM:HOG000163048 KO:K12599 OMA:TRLDETC EMBL:U09877 EMBL:X98378
            EMBL:Z48796 IPI:IPI00414819 PIR:S56752 RefSeq:NP_008860.4
            UniGene:Hs.89864 ProteinModelPortal:Q15477 SMR:Q15477 IntAct:Q15477
            STRING:Q15477 PhosphoSite:Q15477 DMDM:3123284 PaxDb:Q15477
            PRIDE:Q15477 DNASU:6499 Ensembl:ENST00000375394
            Ensembl:ENST00000383336 Ensembl:ENST00000412823
            Ensembl:ENST00000421789 Ensembl:ENST00000429465
            Ensembl:ENST00000448219 GeneID:6499 KEGG:hsa:6499 UCSC:uc003nyn.1
            CTD:6499 GeneCards:GC06P031926 H-InvDB:HIX0005742
            H-InvDB:HIX0166115 H-InvDB:HIX0166390 H-InvDB:HIX0166908
            H-InvDB:HIX0167165 H-InvDB:HIX0167404 HGNC:HGNC:10898 MIM:600478
            MIM:614602 neXtProt:NX_Q15477 Orphanet:84064 PharmGKB:PA35798
            HOVERGEN:HBG060025 InParanoid:Q15477 OrthoDB:EOG47H5P5
            PhylomeDB:Q15477 ChiTaRS:SKIV2L GenomeRNAi:6499 NextBio:25263
            ArrayExpress:Q15477 Bgee:Q15477 CleanEx:HS_SKIV2L
            Genevestigator:Q15477 Uniprot:Q15477
        Length = 1246

 Score = 132 (51.5 bits), Expect = 1.0e-05, Sum P(4) = 1.0e-05
 Identities = 55/198 (27%), Positives = 92/198 (46%)

Query:   921 LLVFVHSRKETGKTARAIRDMCL----EKDTLGQFLREGSASMEVLRTEADQVKNGELRD 976
             ++VF  SR    + A  +  + L    EK  +  FL+   A +     +  QV +  + +
Sbjct:   569 VVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQRCLARLRGSDRQLPQVLH--MSE 626

Query:   977 LLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV-------DR 1029
             LL  G  +HH+G+  + + +VE LF+   ++VL +T T A GVN+PA TVV       D 
Sbjct:   627 LLNRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETFAMGVNMPARTVVFDSMRKHDG 686

Query:  1030 TLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQMLG 1089
             +   DL    ++Q+         G++ P  TVI+         KGR  E+  L  + M+G
Sbjct:   687 STFRDLLPGEYVQMAGRAGRR--GLD-PTGTVILLC-------KGRVPEMADLHRM-MMG 735

Query:  1090 RAGRPQYDTKGEGVLITN 1107
             +  + Q   +    +I N
Sbjct:   736 KPSQLQSQFRLTYTMILN 753

 Score = 72 (30.4 bits), Expect = 1.0e-05, Sum P(4) = 1.0e-05
 Identities = 27/94 (28%), Positives = 47/94 (50%)

Query:   559 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLL-RIKPETG 616
             DE+H ++D ERG V E ++           + V ++ LSAT+PN  + A  + R+K    
Sbjct:   423 DEVHYINDVERGVVWEEVLIML-------PDHVSIILLSATVPNALEFADWIGRLKRRQ- 474

Query:   617 LFYFDNSFRPVALEQQ-YIGVTEKKALKRFQVMN 649
             ++      RPV LE   + G + K   + F +++
Sbjct:   475 IYVISTVTRPVPLEHYLFTGNSSKTQGELFLLLD 508

 Score = 72 (30.4 bits), Expect = 1.0e-05, Sum P(4) = 1.0e-05
 Identities = 27/94 (28%), Positives = 47/94 (50%)

Query:   815 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLL-RIKPETG 872
             DE+H ++D ERG V E ++           + V ++ LSAT+PN  + A  + R+K    
Sbjct:   423 DEVHYINDVERGVVWEEVLIML-------PDHVSIILLSATVPNALEFADWIGRLKRRQ- 474

Query:   873 LFYFDNSFRPVALEQQ-YIGVTEKKALKRFQVMN 905
             ++      RPV LE   + G + K   + F +++
Sbjct:   475 IYVISTVTRPVPLEHYLFTGNSSKTQGELFLLLD 508

 Score = 50 (22.7 bits), Expect = 1.0e-05, Sum P(4) = 1.0e-05
 Identities = 31/115 (26%), Positives = 53/115 (46%)

Query:   444 EEVHVPALKPKPMGPDETLVPIDKLPRYVQHAFEDFKTLNRIQSRLCKSALESDENLLLC 503
             E+  +P     P+G    L+P    P + Q AFE    + + Q+ L    LE  +++ + 
Sbjct:   281 EQWAIPVDATSPVGDFYRLIP---QPAF-QWAFEP--DVFQKQAIL---HLERHDSVFVA 331

Query:   504 APTGAGKTNVA--LLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNF 556
             A T AGKT VA   + + Q   KH+           + IY +P+++L  +   +F
Sbjct:   332 AHTSAGKTVVAEYAIALAQ---KHMT----------RTIYTSPIKALSNQKFRDF 373

 Score = 42 (19.8 bits), Expect = 1.0e-05, Sum P(4) = 1.0e-05
 Identities = 7/17 (41%), Positives = 12/17 (70%)

Query:  1672 IDVSEYYSGGESDSDVE 1688
             +D+ EYYS GE  ++ +
Sbjct:   806 VDLPEYYSWGEELTETQ 822


>TAIR|locus:2075566 [details] [associations]
            symbol:AT3G46960 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0016817
            "hydrolase activity, acting on acid anhydrides" evidence=IEA]
            [GO:0016818 "hydrolase activity, acting on acid anhydrides, in
            phosphorus-containing anhydrides" evidence=IEA] [GO:0005773
            "vacuole" evidence=IDA] [GO:0006813 "potassium ion transport"
            evidence=IMP] [GO:0035864 "response to potassium ion" evidence=IMP]
            [GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0031048
            "chromatin silencing by small RNA" evidence=RCA] [GO:0045132
            "meiotic chromosome segregation" evidence=RCA] InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005773
            EMBL:CP002686 GO:GO:0003676 GO:GO:0006813 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR025696
            Pfam:PF13234 KO:K12599 OMA:TRLDETC IPI:IPI00544785
            RefSeq:NP_190280.5 UniGene:At.28750 UniGene:At.48743
            ProteinModelPortal:F4JAA5 SMR:F4JAA5 PRIDE:F4JAA5
            EnsemblPlants:AT3G46960.1 GeneID:823849 KEGG:ath:AT3G46960
            GO:GO:0035864 Uniprot:F4JAA5
        Length = 1347

 Score = 126 (49.4 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
 Identities = 43/147 (29%), Positives = 67/147 (45%)

Query:   886 EQQYIGVTEKK-ALKRFQVMNDIVYEKVMEHAGRNQLLVFVHSRKETGKTARAIRDMCL- 943
             +  Y G ++   A +R    N ++    +       ++VF  S+    + A A+    L 
Sbjct:   616 KSSYSGNSQNNGAFRRSAASNWLLLINKLSKMSLLPVVVFCFSKNYCDRCADALTGTDLT 675

Query:   944 ---EKDTLGQFLREGSASMEVLRTEADQVKNGELRDLLPYGFAIHHAGMTRVDRTLVEDL 1000
                EK  +  F  +  + ++       QV    L+ LL  G  +HHAG+  + + +VE L
Sbjct:   676 SSSEKSEIRVFCDKAFSRLKGSDRNLPQVLR--LQSLLHRGIGVHHAGLLPIVKEVVEML 733

Query:  1001 FADRHIQVLVSTATLAWGVNLPAHTVV 1027
             F    I+VL ST T A GVN PA TVV
Sbjct:   734 FCRGVIKVLFSTETFAMGVNAPARTVV 760

 Score = 113 (44.8 bits), Expect = 0.00025, Sum P(3) = 0.00025
 Identities = 37/107 (34%), Positives = 58/107 (54%)

Query:  1002 ADRHI-QVLVSTATLAWGVNLPAHTVVD--RTLVEDLFADRHIQVLVSTATLAWGVNLPA 1058
             +DR++ QVL   + L  G+ +    ++   + +VE LF    I+VL ST T A GVN PA
Sbjct:   697 SDRNLPQVLRLQSLLHRGIGVHHAGLLPIVKEVVEMLFCRGVIKVLFSTETFAMGVNAPA 756

Query:  1059 HTVIIKGTQIYNPEKGRWVELGALDVLQMLGRAGRPQYDTKGEGVLI 1105
              TV+    + ++ ++ R +  G  +  QM GRAGR   D  G  V++
Sbjct:   757 RTVVFDALRKFDGKEFRQLLPG--EYTQMAGRAGRRGLDKTGTVVVM 801

 Score = 67 (28.6 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
 Identities = 25/73 (34%), Positives = 36/73 (49%)

Query:   559 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGL 617
             DE+H ++D ERG V E +I    R+I         V LSAT+PN  + A  +    +  +
Sbjct:   472 DEVHYVNDVERGVVWEEVIIMLPRHIN-------FVLLSATVPNTFEFADWIGRTKQKEI 524

Query:   618 FYFDNSFRPVALE 630
                  + RPV LE
Sbjct:   525 RVTGTTKRPVPLE 537

 Score = 67 (28.6 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
 Identities = 25/73 (34%), Positives = 36/73 (49%)

Query:   815 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGL 873
             DE+H ++D ERG V E +I    R+I         V LSAT+PN  + A  +    +  +
Sbjct:   472 DEVHYVNDVERGVVWEEVIIMLPRHIN-------FVLLSATVPNTFEFADWIGRTKQKEI 524

Query:   874 FYFDNSFRPVALE 886
                  + RPV LE
Sbjct:   525 RVTGTTKRPVPLE 537

 Score = 58 (25.5 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
 Identities = 24/87 (27%), Positives = 40/87 (45%)

Query:   479 FKTLNRIQSRLCKSALESDENLLLCAPTGAGKTNVALLCMLQEIGKHINADGTINADEFK 538
             F+  N  +  +C   LE  E++ + A T AGKT VA         KH            +
Sbjct:   359 FELDNFQKEAIC--CLEKGESVFVAAHTSAGKTVVAEYAFALAT-KHCT----------R 405

Query:   539 IIYVAPMRSLVQEMVGNF-GKDEIHLL 564
              +Y AP++++  +   +F GK ++ LL
Sbjct:   406 AVYTAPIKTISNQKYRDFCGKFDVGLL 432


>DICTYBASE|DDB_G0278827 [details] [associations]
            symbol:DDB_G0278827 "Probable ATP-dependent RNA
            helicase DDX60" species:44689 "Dictyostelium discoideum"
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
            binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
            dictyBase:DDB_G0278827 GO:GO:0005524 GO:GO:0005634 GO:GO:0003676
            EMBL:AAFI02000024 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 eggNOG:COG4581 RefSeq:XP_641993.1
            ProteinModelPortal:Q54XN7 EnsemblProtists:DDB0206223 GeneID:8621725
            KEGG:ddi:DDB_G0278827 InParanoid:Q54XN7 OMA:RESALIC Uniprot:Q54XN7
        Length = 1816

 Score = 114 (45.2 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
 Identities = 44/138 (31%), Positives = 65/138 (47%)

Query:   902 QVMNDIVYEKVMEHA--GRNQL-LVFVHSRKETGKTARAIRDMCLEKDTLGQFLREGSAS 958
             +V NDI +     +    + QL LV    +K  G+    +     EK  L + L+   AS
Sbjct:  1178 RVYNDITHRNTNPNIIEEKKQLDLVIERFQKSLGRALADLEPNDPEKMELER-LKAKRAS 1236

Query:   959 MEVLR--------TEADQ-VKNGELRDLLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVL 1009
             ++ L+        ++ D+ VK   L   L  G A HH G  +     VE LF  + IQV+
Sbjct:  1237 LDYLKPQFGNLLSSDIDEKVKKDPLAPALTQGIAAHHGGCDKNYLRNVEYLFRSKKIQVV 1296

Query:  1010 VSTATLAWGVNLPAHTVV 1027
              +T+TLA GVN PA + V
Sbjct:  1297 FATSTLAVGVNAPAKSSV 1314

 Score = 99 (39.9 bits), Expect = 0.00057, Sum P(2) = 0.00057
 Identities = 28/74 (37%), Positives = 37/74 (50%)

Query:  1032 VEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQMLGRA 1091
             VE LF  + IQV+ +T+TLA GVN PA + +  G   Y         L  L   Q  GRA
Sbjct:  1284 VEYLFRSKKIQVVFATSTLAVGVNAPAKSSVFLGDSPY---------LNVLTSKQCAGRA 1334

Query:  1092 GRPQYDTKGEGVLI 1105
             GR  +D  G  + +
Sbjct:  1335 GRRGFDNYGNVIFV 1348

 Score = 89 (36.4 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
 Identities = 28/99 (28%), Positives = 49/99 (49%)

Query:   494 LESDENLLLCAPTGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEM- 552
             ++  E+ L+CA T +GKT ++  C  ++I K  N DG +       ++V P ++LV +M 
Sbjct:   829 VDKRESALICASTSSGKTFISFYCF-EQILKESN-DGIV-------VFVCPTKALVNQMY 879

Query:   553 ---VGNFGKDEIHLLHDERGPVLEALIARTIR-NIEATQ 587
                +G + K+   + H      +  +  R  R NIE  Q
Sbjct:   880 AEVLGRYDKNYQAINHRPSNHKMVGVFTRDFRLNIETCQ 918


>UNIPROTKB|E1BMS0 [details] [associations]
            symbol:LOC100139548 "Uncharacterized protein" species:9913
            "Bos taurus" [GO:0055087 "Ski complex" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR012961 InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08148 PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 InterPro:IPR025696 Pfam:PF13234
            GO:GO:0055087 OMA:TRLDETC GeneTree:ENSGT00690000102154
            EMBL:DAAA02055371 IPI:IPI00690289 RefSeq:XP_003583920.1
            RefSeq:XP_003587743.1 Ensembl:ENSBTAT00000007339 GeneID:100139548
            KEGG:bta:100139548 Uniprot:E1BMS0
        Length = 1246

 Score = 132 (51.5 bits), Expect = 2.0e-05, Sum P(4) = 2.0e-05
 Identities = 55/198 (27%), Positives = 92/198 (46%)

Query:   921 LLVFVHSRKETGKTARAIRDMCL----EKDTLGQFLREGSASMEVLRTEADQVKNGELRD 976
             ++VF  SR    + A  +  + L    EK  +  FL+   A +     +  QV +  + +
Sbjct:   569 VVVFTFSRGRCDEQASGLTSLDLTTSSEKSEIHLFLQRCLARLRGSDRQLPQVLH--MSE 626

Query:   977 LLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV-------DR 1029
             LL  G  +HH+G+  + + +VE LF+   ++VL +T T A GVN+PA TVV       D 
Sbjct:   627 LLHRGLGVHHSGILPILKEIVEMLFSRGLVKVLFATETFAMGVNMPARTVVFDSMRKHDG 686

Query:  1030 TLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQMLG 1089
             +   DL    ++Q+         G++ P  TVI+         KGR  E+  L  + M+G
Sbjct:   687 STFRDLLPGEYVQMAGRAGRR--GLD-PTGTVILLC-------KGRVPEMADLHRM-MMG 735

Query:  1090 RAGRPQYDTKGEGVLITN 1107
             +  + Q   +    +I N
Sbjct:   736 KPSQLQSQFRLTYTMILN 753

 Score = 71 (30.1 bits), Expect = 2.0e-05, Sum P(4) = 2.0e-05
 Identities = 27/94 (28%), Positives = 47/94 (50%)

Query:   559 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLL-RIKPETG 616
             DE+H ++D ERG V E ++           + V ++ LSAT+PN  + A  + R+K    
Sbjct:   423 DEVHYINDAERGVVWEEVLIML-------PDHVSIILLSATVPNALEFADWIGRLKRRQ- 474

Query:   617 LFYFDNSFRPVALEQQ-YIGVTEKKALKRFQVMN 649
             ++      RPV LE   + G + K   + F +++
Sbjct:   475 IYVISTVARPVPLEHYLFTGNSPKTQGELFLLLD 508

 Score = 71 (30.1 bits), Expect = 2.0e-05, Sum P(4) = 2.0e-05
 Identities = 27/94 (28%), Positives = 47/94 (50%)

Query:   815 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLL-RIKPETG 872
             DE+H ++D ERG V E ++           + V ++ LSAT+PN  + A  + R+K    
Sbjct:   423 DEVHYINDAERGVVWEEVLIML-------PDHVSIILLSATVPNALEFADWIGRLKRRQ- 474

Query:   873 LFYFDNSFRPVALEQQ-YIGVTEKKALKRFQVMN 905
             ++      RPV LE   + G + K   + F +++
Sbjct:   475 IYVISTVARPVPLEHYLFTGNSPKTQGELFLLLD 508

 Score = 49 (22.3 bits), Expect = 2.0e-05, Sum P(4) = 2.0e-05
 Identities = 30/117 (25%), Positives = 52/117 (44%)

Query:   449 PALKPKPMGPDETLVPIDKL-P-----RYV-QHAFEDFKTLNRIQSRLCKSALESDENLL 501
             P   PKP   ++  +P+D   P     R + Q AF+     +  Q +     LE  +++ 
Sbjct:   271 PPEPPKPPPQEQWAIPVDVTSPVGDFYRLIPQPAFQWAFEPDVFQKQAILH-LERHDSVF 329

Query:   502 LCAPTGAGKTNVA--LLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMVGNF 556
             + A T AGKT VA   + + Q   KH+           + IY +P+++L  +   +F
Sbjct:   330 VAAHTSAGKTVVAEYAIALAQ---KHMT----------RTIYTSPIKALSNQKFRDF 373

 Score = 41 (19.5 bits), Expect = 2.0e-05, Sum P(4) = 2.0e-05
 Identities = 7/11 (63%), Positives = 9/11 (81%)

Query:  1672 IDVSEYYSGGE 1682
             +D+ EYYS GE
Sbjct:   806 VDLPEYYSWGE 816


>UNIPROTKB|F1MAH7 [details] [associations]
            symbol:F1MAH7 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
            GO:GO:0000178 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0000460 GO:GO:0008026 InterPro:IPR025696
            Pfam:PF13234 IPI:IPI00372914 PRIDE:F1MAH7
            Ensembl:ENSRNOT00000013683 ArrayExpress:F1MAH7 Uniprot:F1MAH7
        Length = 1046

 Score = 133 (51.9 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
 Identities = 28/76 (36%), Positives = 46/76 (60%)

Query:  1032 VEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQMLGRA 1091
             +E LF++  I+ L +T T A G+N+PA TV+    + Y+ +  RW+  G  + +QM GRA
Sbjct:   467 IEILFSEGLIKALFATETFAMGINMPARTVLFTNARKYDGKDFRWISSG--EYIQMSGRA 524

Query:  1092 GRPQYDTKGEGVLITN 1107
             GR   D +G  +L+ +
Sbjct:   525 GRRGMDDRGIVILMVD 540

 Score = 71 (30.1 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
 Identities = 29/79 (36%), Positives = 38/79 (48%)

Query:   559 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVAT-LLRI-KPET 615
             DEIH + D ERG V E  I           ++V  V LSAT+PN +  A  +  + K   
Sbjct:   252 DEIHYMRDSERGVVWEETII-------LLPDNVHYVFLSATIPNARQFAEWICHLHKQPC 304

Query:   616 GLFYFDNSFRPVALEQQYI 634
              + Y D  +RP  L Q YI
Sbjct:   305 HVIYTD--YRPTPL-QHYI 320

 Score = 71 (30.1 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
 Identities = 29/79 (36%), Positives = 38/79 (48%)

Query:   815 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVAT-LLRI-KPET 871
             DEIH + D ERG V E  I           ++V  V LSAT+PN +  A  +  + K   
Sbjct:   252 DEIHYMRDSERGVVWEETII-------LLPDNVHYVFLSATIPNARQFAEWICHLHKQPC 304

Query:   872 GLFYFDNSFRPVALEQQYI 890
              + Y D  +RP  L Q YI
Sbjct:   305 HVIYTD--YRPTPL-QHYI 320

 Score = 40 (19.1 bits), Expect = 2.5e-05, Sum P(3) = 2.5e-05
 Identities = 15/47 (31%), Positives = 20/47 (42%)

Query:    40 VCSLVGKLEGTRMGDRFMRTKPIKAEERKVKRQKRDEAQYDFTRMKG 86
             VC+        R   R + T PIKA   +  R+  +E Q D   M G
Sbjct:   169 VCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQ-DVGLMTG 214

 Score = 37 (18.1 bits), Expect = 4.9e-05, Sum P(3) = 4.9e-05
 Identities = 8/18 (44%), Positives = 13/18 (72%)

Query:   494 LESDENLLLCAPTGAGKT 511
             L  ++++L+ A T AGKT
Sbjct:   151 LTINQSVLVSAHTSAGKT 168


>ZFIN|ZDB-GENE-010430-5 [details] [associations]
            symbol:skiv2l "superkiller viralicidic activity 2 (S.
            cerevisiae homolog)-like" species:7955 "Danio rerio" [GO:0016817
            "hydrolase activity, acting on acid anhydrides" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
            acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
            PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-010430-5 GO:GO:0005524
            GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR025696 Pfam:PF13234
            GeneTree:ENSGT00690000102154 EMBL:FP102194 EMBL:FP067438
            IPI:IPI00490616 Ensembl:ENSDART00000089609 OMA:TIMASAD Bgee:F1R881
            Uniprot:F1R881
        Length = 1249

 Score = 150 (57.9 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
 Identities = 78/312 (25%), Positives = 139/312 (44%)

Query:   815 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLL-RIKPETG 872
             DE+H ++D ERG V E ++           E V ++ LSAT+PN  + +  + RIK +  
Sbjct:   431 DEVHYINDAERGVVWEEVLIML-------PEHVSIILLSATVPNAVEFSEWIGRIK-KRH 482

Query:   873 LFYFDNSFRPVALEQQ-YIGVTEKKALKRFQVMN--------------DIVYEKVMEHAG 917
             ++      RPV LE   Y G + K   + F +++              +   E+  +HA 
Sbjct:   483 IYVISTIKRPVPLEHYLYTGNSTKTQKELFMLLDATGNFLTKGYYAAVEAKKERTSKHA- 541

Query:   918 RNQLLVFVHSRKETGKTARAIRDMCLEKDTLGQFLREGSASMEVLRTEADQVKNGELRDL 977
             ++     V     T    RA+    L  + L Q  +    +    RT  D+  N      
Sbjct:   542 QSFGTKNVSQHNTTASQDRAVWQTLL--NYLSQRQQTPVVAFTFSRTRCDE--NARSLTS 597

Query:   978 LPYGFAIHHAGM-TRVDRTLVEDLFADRHI-QVLVSTATLAWGVNLPAHTVVD--RTLVE 1033
             L    +I  + + + + ++L      DR + Q+L+    L  G+ +    ++   + ++E
Sbjct:   598 LDLTTSIEKSEIHSFLQKSLTRLRGGDRQLPQILLMRDLLKRGIGVHHSGILPILKEVIE 657

Query:  1034 DLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQMLGRAGR 1093
              LF+   ++VL +T T A GVN+PA TV+    + ++    R +  G  + +QM GRAGR
Sbjct:   658 MLFSRGLVKVLFATETFAMGVNMPARTVVFDSIRKHDGTGFRNLLPG--EYIQMAGRAGR 715

Query:  1094 PQYDTKGEGVLI 1105
                D  G  +++
Sbjct:   716 RGLDATGTVIIL 727

 Score = 47 (21.6 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
 Identities = 17/63 (26%), Positives = 31/63 (49%)

Query:   494 LESDENLLLCAPTGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMV 553
             LE+ +++ + A T AGKT VA   +     KH+           + IY +P+++L  +  
Sbjct:   330 LEAHDSVFVAAHTSAGKTVVAEYAIALS-QKHMT----------RTIYTSPIKALSNQKF 378

Query:   554 GNF 556
              +F
Sbjct:   379 RDF 381


>WB|WBGene00001047 [details] [associations]
            symbol:dnj-29 species:6239 "Caenorhabditis elegans"
            [GO:0031072 "heat shock protein binding" evidence=IEA] [GO:0016021
            "integral to membrane" evidence=IEA] InterPro:IPR001623
            Pfam:PF00226 Gene3D:1.10.287.110 SMART:SM00271 SUPFAM:SSF46565
            PROSITE:PS50076 InterPro:IPR004179 Pfam:PF02889 SMART:SM00611
            SMART:SM00973 HSSP:P25685 eggNOG:COG5407 HOGENOM:HOG000037933
            KO:K09540 OMA:TIENCMK GeneTree:ENSGT00390000001965 EMBL:AL032652
            PIR:D87965 PIR:T27276 RefSeq:NP_493463.1 ProteinModelPortal:Q9U1V9
            SMR:Q9U1V9 STRING:Q9U1V9 PaxDb:Q9U1V9 PRIDE:Q9U1V9
            EnsemblMetazoa:Y63D3A.6b.1 EnsemblMetazoa:Y63D3A.6b.2 GeneID:173278
            KEGG:cel:CELE_Y63D3A.6 UCSC:Y63D3A.6b CTD:173278 WormBase:Y63D3A.6b
            InParanoid:Q9U1V9 NextBio:878975 ArrayExpress:Q9U1V9 Uniprot:Q9U1V9
        Length = 752

 Score = 123 (48.4 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
 Identities = 32/88 (36%), Positives = 47/88 (53%)

Query:  1596 TGPVIAPFYPQKREEGWWVVIG--DPKTNS--LLSIKRL--TLQQKAKIKLDFVAP-NPG 1648
             T  V APF+P ++ E WW+ +   D K  S  LL+  +L  TL  +  I + F AP + G
Sbjct:   629 THTVHAPFFPTEKFEWWWITVAYVDKKEKSRQLLTFPQLVKTLIDEQTIDIRFAAPPHKG 688

Query:  1649 HHSYALYFMSDAYLGCDQEYKFSIDVSE 1676
              ++Y L   SD+Y+  +    F IDV E
Sbjct:   689 IYTYNLSVKSDSYMDAEYSVDFKIDVKE 716

 Score = 69 (29.3 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
 Identities = 26/94 (27%), Positives = 43/94 (45%)

Query:  1284 KESTDEPSA-KVNILLQAYISQLKLEGF--ALMSDMVFVTQSAARLMRAIFE----IVLY 1336
             ++   +P A K  +LL AY+S+L LE    AL  D  ++     R +  +      ++ Y
Sbjct:   293 EQPLSQPYALKSRVLLHAYLSRLPLESQNDALEEDQSYIITRILRFVEEMVNCSQNLMNY 352

Query:  1337 RGWAQLA----DKALSLCKMVDRRMWQSMSPLRQ 1366
                 +++    D  L L  M  + +WQ  SPL Q
Sbjct:   353 SQHTKISIETFDNLLKLQPMFVQALWQKNSPLLQ 386

 Score = 67 (28.6 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
 Identities = 14/43 (32%), Positives = 24/43 (55%)

Query:  1491 MEVAQMITQAMWSKDSYLKQLPHFNADIIKRCTEKGVETVFDI 1533
             +++  M  QA+W K+S L QLPH     ++   +K V +  D+
Sbjct:   367 LKLQPMFVQALWQKNSPLLQLPHITDYNLQHLRKKRVFSCHDL 409


>ASPGD|ASPL0000070749 [details] [associations]
            symbol:mtr4 species:162425 "Emericella nidulans"
            [GO:0008150 "biological_process" evidence=ND] [GO:0031499 "TRAMP
            complex" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:BN001303
            GO:GO:0031499 GO:GO:0043629 GO:GO:0071035 GO:GO:0071038
            EMBL:AACD01000076 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0000467 GO:GO:0071042 GO:GO:0071051 GO:GO:0008143
            GO:GO:0034459 eggNOG:COG4581 GO:GO:0034475 GO:GO:0034476
            HOGENOM:HOG000163047 KO:K12598 OMA:ENFQKAM InterPro:IPR025696
            Pfam:PF13234 OrthoDB:EOG4S1XG7 GO:GO:0071049 RefSeq:XP_662016.1
            ProteinModelPortal:Q5B4W8 STRING:Q5B4W8
            EnsemblFungi:CADANIAT00006045 GeneID:2872204 KEGG:ani:AN4412.2
            Uniprot:Q5B4W8
        Length = 1073

 Score = 135 (52.6 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
 Identities = 78/307 (25%), Positives = 131/307 (42%)

Query:   815 DEIHLLHDE-RGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVA---TLLRIKPE 870
             DEIH + D  RG V E  I           + VR V LSAT+PN    A   T +  +P 
Sbjct:   265 DEIHYMRDATRGVVWEETII-------LLPDKVRYVFLSATIPNAMQFAEWITKMHNQP- 316

Query:   871 TGLFYFDNSFRPVALEQQYI-----G---VTEKKALKRFQVMNDIVYEKVMEHAGRNQLL 922
               + Y D  FRP  L+  +      G   + ++K + R +     +   + +  G +   
Sbjct:   317 CHVVYTD--FRPTPLQHYFFPAGSEGMHLIVDEKGVFREENFQKAM-SSIADKKGDDPAD 373

Query:   923 VFVHSRKETGKTARAIRDMCLEKDTLGQFLREGSA-SMEVLRTEADQVKNGELRDLLPYG 981
                  RK  GK  +  +    EKD + + ++     S+  +   +   +  E   L    
Sbjct:   374 ALA-KRKGKGKDKKLNKGGTQEKDDIYKIVKMIMLKSLNPVIVFSFSKRECEFYALKMKS 432

Query:   982 FAIHHAG----MTRVDRTLVEDLFA-DRH---IQVLVSTATLAWGVNLPAHTVVDRTLVE 1033
              A +       +++V  + +E L   DR+   IQ ++       GV+      + +  +E
Sbjct:   433 LAFNDDSEKEMVSKVFNSAIEMLSEEDRNLPQIQNILPLLRRGIGVHHSGLLPILKETIE 492

Query:  1034 DLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQMLGRAGR 1093
              LF +  I+VL +T T + G+N+PA TV+    + ++    RWV     + +QM GRAGR
Sbjct:   493 ILFQEGLIKVLFATETFSIGLNMPAKTVVFTSVRKFDGFSQRWVTPS--EFVQMSGRAGR 550

Query:  1094 PQYDTKG 1100
                D +G
Sbjct:   551 RGLDDRG 557

 Score = 60 (26.2 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
 Identities = 22/79 (27%), Positives = 42/79 (53%)

Query:   481 TLNRIQSRLCKSALESDENLLLCAPTGAGKTNVALLCMLQEIGKHINADGTINADEFKII 540
             TL+  Q ++  S+++  E++L+ A T AGKT VA   + Q + K+ N          ++I
Sbjct:   152 TLDPFQ-QVAVSSIQRGESVLVSAHTSAGKTVVAEYAIAQSL-KN-NQ---------RVI 199

Query:   541 YVAPMRSLVQEMVGNFGKD 559
             Y +P+++L  +    F  +
Sbjct:   200 YTSPIKALSNQKYREFAAE 218


>UNIPROTKB|J9P0M0 [details] [associations]
            symbol:DDX60 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            GeneTree:ENSGT00690000102154 EMBL:AAEX03010133 EMBL:AAEX03010134
            EMBL:AAEX03010135 Ensembl:ENSCAFT00000044956 Uniprot:J9P0M0
        Length = 1708

 Score = 131 (51.2 bits), Expect = 4.9e-05, Sum P(3) = 4.9e-05
 Identities = 67/253 (26%), Positives = 115/253 (45%)

Query:   878 NSFRPV--ALEQQYIGVTEKKALKRFQVMND-IVYEKVMEHAGRNQLLVFVHSRKETGKT 934
             N  R +  ++E+Q     ++++LK  + M+  ++YE   EH   N LL  +    E  + 
Sbjct:  1167 NKIRKIRKSIERQK--TIDERSLKNPRKMDQKLIYEA--EH---NNLLKILEKNLEIPEE 1219

Query:   935 ARAIRDMCLEKDTLGQFLREGSASMEVLRTEADQVKNGELRDLLPYGFAIHHAGMTRVDR 994
                     ++ +TL          M   R +  + K  EL+ L   G   HH+ ++  D+
Sbjct:  1220 CTYANQKAIDAETL---------QMVFDRVKFTR-KGAELKALARRGIGYHHSSLSFKDK 1269

Query:   995 TLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV--DRTLVEDLF--------ADRHIQVL 1044
              LVE LF    I+V+ +T TLA G+N+P  +VV    ++  D          A R  Q L
Sbjct:  1270 QLVEVLFRKGFIRVVTATGTLALGINMPCKSVVFAQNSIYLDALNYRQMSGRAGRRGQDL 1329

Query:  1045 VSTATLAWGVNLPAHTVIIKGTQIYNPE-KGRWVELGALDVLQML---GRAGRPQYDTKG 1100
             +      +G+ LP    +IK      PE +G++  LG   VL+++    +A  P+ D K 
Sbjct:  1330 MGDVYF-FGIPLPKIEKLIKSNV---PELRGQF-PLGITLVLRLMLLASKADDPE-DAKA 1383

Query:  1101 EGVLITNHSELQY 1113
             + + +  HS L +
Sbjct:  1384 KVLSVLKHSLLSF 1396

 Score = 77 (32.2 bits), Expect = 4.9e-05, Sum P(3) = 4.9e-05
 Identities = 18/59 (30%), Positives = 37/59 (62%)

Query:   494 LESDENLLLCAPTGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEM 552
             ++++E+ ++ APT +GKT  +  CM +++ K  N +G +       +YVAP ++LV ++
Sbjct:   771 VDNNESAVIVAPTSSGKTYASYYCM-EKVLKESN-EGVV-------VYVAPTKALVNQV 820

 Score = 40 (19.1 bits), Expect = 4.9e-05, Sum P(3) = 4.9e-05
 Identities = 13/41 (31%), Positives = 21/41 (51%)

Query:   793 FKIIYVAPMRSLVQEMVGNFGKDEIHLLHDERGP-VLEALI 832
             F+I+ ++P R    + +     DE+H L  E G  V E L+
Sbjct:   863 FEILLLSPHRQAWVKRIRYVIFDEVHCLGGEIGAEVWEHLL 903


>UNIPROTKB|E2QSY2 [details] [associations]
            symbol:DDX60 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:1900246 "positive regulation of RIG-I
            signaling pathway" evidence=IEA] [GO:1900245 "positive regulation
            of MDA-5 signaling pathway" evidence=IEA] [GO:0051607 "defense
            response to virus" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0003727 "single-stranded RNA binding"
            evidence=IEA] [GO:0003725 "double-stranded RNA binding"
            evidence=IEA] [GO:0003690 "double-stranded DNA binding"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0003727
            GO:GO:0051607 GO:GO:0003690 GO:GO:0003725 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 OMA:QDCTYAD
            GO:GO:1900245 GO:GO:1900246 GeneTree:ENSGT00690000102154
            EMBL:AAEX03010133 EMBL:AAEX03010134 EMBL:AAEX03010135
            Ensembl:ENSCAFT00000014321 Uniprot:E2QSY2
        Length = 1711

 Score = 131 (51.2 bits), Expect = 4.9e-05, Sum P(3) = 4.9e-05
 Identities = 67/253 (26%), Positives = 115/253 (45%)

Query:   878 NSFRPV--ALEQQYIGVTEKKALKRFQVMND-IVYEKVMEHAGRNQLLVFVHSRKETGKT 934
             N  R +  ++E+Q     ++++LK  + M+  ++YE   EH   N LL  +    E  + 
Sbjct:  1170 NKIRKIRKSIERQK--TIDERSLKNPRKMDQKLIYEA--EH---NNLLKILEKNLEIPEE 1222

Query:   935 ARAIRDMCLEKDTLGQFLREGSASMEVLRTEADQVKNGELRDLLPYGFAIHHAGMTRVDR 994
                     ++ +TL          M   R +  + K  EL+ L   G   HH+ ++  D+
Sbjct:  1223 CTYANQKAIDAETL---------QMVFDRVKFTR-KGAELKALARRGIGYHHSSLSFKDK 1272

Query:   995 TLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV--DRTLVEDLF--------ADRHIQVL 1044
              LVE LF    I+V+ +T TLA G+N+P  +VV    ++  D          A R  Q L
Sbjct:  1273 QLVEVLFRKGFIRVVTATGTLALGINMPCKSVVFAQNSIYLDALNYRQMSGRAGRRGQDL 1332

Query:  1045 VSTATLAWGVNLPAHTVIIKGTQIYNPE-KGRWVELGALDVLQML---GRAGRPQYDTKG 1100
             +      +G+ LP    +IK      PE +G++  LG   VL+++    +A  P+ D K 
Sbjct:  1333 MGDVYF-FGIPLPKIEKLIKSNV---PELRGQF-PLGITLVLRLMLLASKADDPE-DAKA 1386

Query:  1101 EGVLITNHSELQY 1113
             + + +  HS L +
Sbjct:  1387 KVLSVLKHSLLSF 1399

 Score = 77 (32.2 bits), Expect = 4.9e-05, Sum P(3) = 4.9e-05
 Identities = 18/59 (30%), Positives = 37/59 (62%)

Query:   494 LESDENLLLCAPTGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEM 552
             ++++E+ ++ APT +GKT  +  CM +++ K  N +G +       +YVAP ++LV ++
Sbjct:   774 VDNNESAVIVAPTSSGKTYASYYCM-EKVLKESN-EGVV-------VYVAPTKALVNQV 823

 Score = 40 (19.1 bits), Expect = 4.9e-05, Sum P(3) = 4.9e-05
 Identities = 13/41 (31%), Positives = 21/41 (51%)

Query:   793 FKIIYVAPMRSLVQEMVGNFGKDEIHLLHDERGP-VLEALI 832
             F+I+ ++P R    + +     DE+H L  E G  V E L+
Sbjct:   866 FEILLLSPHRQAWVKRIRYVIFDEVHCLGGEIGAEVWEHLL 906


>POMBASE|SPAC694.02 [details] [associations]
            symbol:SPAC694.02 "DEAD/DEAH box helicase" species:4896
            "Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005829 "cytosol" evidence=IDA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 PomBase:SPAC694.02
            GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG4581 PIR:T50247 RefSeq:NP_594482.1
            ProteinModelPortal:Q9P7T8 PRIDE:Q9P7T8 EnsemblFungi:SPAC694.02.1
            GeneID:2543333 KEGG:spo:SPAC694.02 HOGENOM:HOG000194492 OMA:HTRDYRI
            OrthoDB:EOG4S4SQ7 NextBio:20804349 Uniprot:Q9P7T8
        Length = 1717

 Score = 113 (44.8 bits), Expect = 0.00019, Sum P(2) = 0.00019
 Identities = 23/52 (44%), Positives = 33/52 (63%)

Query:   976 DLLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
             D L  G  IHH+G+ R  R +VE LF    + V+++T TL+ G+N+P  TVV
Sbjct:  1219 DALYRGIGIHHSGLNRRYRQIVEVLFRCGQLTVVIATRTLSLGINMPCRTVV 1270

 Score = 107 (42.7 bits), Expect = 0.00079, Sum P(2) = 0.00079
 Identities = 33/114 (28%), Positives = 57/114 (50%)

Query:  1029 RTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQML 1088
             R +VE LF    + V+++T TL+ G+N+P  TV+  G  +         +L AL+  Q  
Sbjct:  1237 RQIVEVLFRCGQLTVVIATRTLSLGINMPCRTVVFLGDSL---------QLNALNFHQAA 1287

Query:  1089 GRAGRPQYDTKGE-GVL-ITNHSELQYYLSLL---NHQLPVESQMISKLPDMLN 1137
             GRAGR  +D  G  G L +  H   +   + L     Q P+ + ++ +L  +++
Sbjct:  1288 GRAGRRGFDLLGHVGFLGVPLHKIYRLLTTKLWDIQGQFPLTTSLVLQLSQLIS 1341

 Score = 79 (32.9 bits), Expect = 0.00019, Sum P(2) = 0.00019
 Identities = 20/59 (33%), Positives = 36/59 (61%)

Query:   494 LESDENLLLCAPTGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEM 552
             L+ DE++ + APT +GKT ++   M +++ +  N DG +       IYVAP ++LV ++
Sbjct:   747 LDRDESVFVVAPTSSGKTFISFYAM-EKVLRD-NDDGVV-------IYVAPTKALVNQL 796


>TAIR|locus:2127373 [details] [associations]
            symbol:ATERDJ2B species:3702 "Arabidopsis thaliana"
            [GO:0006457 "protein folding" evidence=IEA;ISS] [GO:0009507
            "chloroplast" evidence=ISM] [GO:0031072 "heat shock protein
            binding" evidence=IEA] [GO:0051082 "unfolded protein binding"
            evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
            [GO:0005886 "plasma membrane" evidence=IDA] [GO:0030176 "integral
            to endoplasmic reticulum membrane" evidence=IDA] InterPro:IPR027137
            InterPro:IPR001623 Pfam:PF00226 GO:GO:0005886 GO:GO:0006457
            EMBL:CP002687 GO:GO:0030176 Gene3D:1.10.287.110 PRINTS:PR00625
            SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS50076 InterPro:IPR004179
            Pfam:PF02889 SMART:SM00611 SMART:SM00973 UniGene:At.23696
            UniGene:At.71130 KO:K09540 PANTHER:PTHR24075 OMA:ARFIPPG
            IPI:IPI00518885 RefSeq:NP_567621.1 ProteinModelPortal:F4JIN3
            SMR:F4JIN3 PRIDE:F4JIN3 EnsemblPlants:AT4G21180.1 GeneID:827866
            KEGG:ath:AT4G21180 Uniprot:F4JIN3
        Length = 661

 Score = 96 (38.9 bits), Expect = 0.00023, Sum P(4) = 0.00023
 Identities = 35/153 (22%), Positives = 65/153 (42%)

Query:  1482 GWLSPAVAAMEVAQMITQAM-------WSKD-SYLKQLPHFNADIIKRCT--EKGVETVF 1531
             GWL PA+  ME++Q I QA+        S+D +   QLPHFN  I K      K  +   
Sbjct:   354 GWLRPALGVMELSQCIVQAVPLSARKSSSEDIAPFLQLPHFNESIAKSIALQVKSFQKFQ 413

Query:  1532 DI-MXXXXXXXXXXXXXXXXXXADVARFCNRYPNIELSY--EVLNKDRIXXXXXXXXXX- 1587
             ++ +                   D+ +     P+++++   +   ++ I           
Sbjct:   414 ELSLAERSKLLREVVSLSETDVQDIEKVLEMIPSLKINVTCKTEGEEGIQEGDIMTVQAW 473

Query:  1588 -XLDREDEVTGPVI-APFYPQKREEGWWVVIGD 1618
               L R + + G +  +P++P  +EE +WV++ D
Sbjct:   474 ITLKRPNGLIGAIPHSPYFPFHKEENFWVLLAD 506

 Score = 67 (28.6 bits), Expect = 0.00023, Sum P(4) = 0.00023
 Identities = 10/32 (31%), Positives = 20/32 (62%)

Query:  1643 VAPNPGHHSYALYFMSDAYLGCDQEYKFSIDV 1674
             +AP  G ++   + +SD ++GCDQ+    ++V
Sbjct:   569 LAPGEGTYNLTCFCLSDTWIGCDQKTSLKVEV 600

 Score = 58 (25.5 bits), Expect = 0.00023, Sum P(4) = 0.00023
 Identities = 14/46 (30%), Positives = 26/46 (56%)

Query:  1223 ASHYYCTH---ETMATYNQLLKPTLSEIELFRVFSLSGEFRHITVR 1265
             +S Y   H   +T   Y +LL+P+L+  ++  +F  + E+  I+VR
Sbjct:   216 SSKYTGNHVKLQTRQAYFELLQPSLTPSKVMDIFIRAAEYAEISVR 261

 Score = 50 (22.7 bits), Expect = 0.00023, Sum P(4) = 0.00023
 Identities = 13/36 (36%), Positives = 18/36 (50%)

Query:   924 FVHSRKETGKTARAIRDMCLEKDTLGQFLREGSASM 959
             FV   +   K  R+I   CLE D  G++ R  S S+
Sbjct:    28 FVKLSRAFSKKQRSIHCQCLECDRSGKYKRSISQSI 63


>DICTYBASE|DDB_G0277211 [details] [associations]
            symbol:DDB_G0277211 "superkiller viralicidic activity
            2-like protein" species:44689 "Dictyostelium discoideum"
            [GO:0016818 "hydrolase activity, acting on acid anhydrides, in
            phosphorus-containing anhydrides" evidence=IEA] [GO:0016817
            "hydrolase activity, acting on acid anhydrides" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0016787
            "hydrolase activity" evidence=IEA] InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012961 InterPro:IPR016438
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08148 PIRSF:PIRSF005198
            PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0277211 GO:GO:0005524
            GO:GO:0003676 EMBL:AAFI02000019 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 eggNOG:COG4581 InterPro:IPR025696
            Pfam:PF13234 KO:K12599 OMA:TRLDETC RefSeq:XP_642686.1
            ProteinModelPortal:Q86K90 EnsemblProtists:DDB0233454 GeneID:8620875
            KEGG:ddi:DDB_G0277211 InParanoid:Q86K90 Uniprot:Q86K90
        Length = 1378

 Score = 125 (49.1 bits), Expect = 0.00023, Sum P(4) = 0.00023
 Identities = 24/55 (43%), Positives = 37/55 (67%)

Query:   973 ELRDLLPYGFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVV 1027
             ++++LL  G  +HH G+  + + LVE LF+   ++VL +T T A GVN+PA TVV
Sbjct:   747 QMKELLERGIGVHHGGLLPIVKELVEILFSKSLVKVLFATETFAMGVNMPAKTVV 801

 Score = 121 (47.7 bits), Expect = 0.00058, Sum P(4) = 0.00058
 Identities = 42/114 (36%), Positives = 59/114 (51%)

Query:  1029 RTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQML 1088
             + LVE LF+   ++VL +T T A GVN+PA TV+   T+ ++    R +  G  +  QM 
Sbjct:   768 KELVEILFSKSLVKVLFATETFAMGVNMPAKTVVYSSTRKHDGITFRDLIPG--EYTQMS 825

Query:  1089 GRAGRPQYDTKGEGVLITNHSELQYYLSLLNHQLPVESQMISKLPDMLNAEIVL 1142
             GRAGR   D  G  V+IT       Y   +  Q  +ES MI   P  LN++  L
Sbjct:   826 GRAGRRGLDKVGT-VIIT-------YWKDIPEQATIES-MILGTPSRLNSQFRL 870

 Score = 70 (29.7 bits), Expect = 0.00023, Sum P(4) = 0.00023
 Identities = 26/86 (30%), Positives = 40/86 (46%)

Query:   559 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGL 617
             DE+H L+D ERG V E +I             V++V LSAT+ N  + A  +    +  +
Sbjct:   546 DEVHYLNDLERGVVWEEVIIML-------PPYVKMVFLSATVSNPLEFAQWIGRTKQLPI 598

Query:   618 FYFDNSFRPVALEQQYIGVTEKKALK 643
             +    + RP+ LE  YI     +  K
Sbjct:   599 YVIGTTKRPIPLEH-YIHTPSNELFK 623

 Score = 70 (29.7 bits), Expect = 0.00023, Sum P(4) = 0.00023
 Identities = 26/86 (30%), Positives = 40/86 (46%)

Query:   815 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGL 873
             DE+H L+D ERG V E +I             V++V LSAT+ N  + A  +    +  +
Sbjct:   546 DEVHYLNDLERGVVWEEVIIML-------PPYVKMVFLSATVSNPLEFAQWIGRTKQLPI 598

Query:   874 FYFDNSFRPVALEQQYIGVTEKKALK 899
             +    + RP+ LE  YI     +  K
Sbjct:   599 YVIGTTKRPIPLEH-YIHTPSNELFK 623

 Score = 45 (20.9 bits), Expect = 0.00023, Sum P(4) = 0.00023
 Identities = 9/21 (42%), Positives = 14/21 (66%)

Query:   494 LESDENLLLCAPTGAGKTNVA 514
             +E  E++ + A T AGKT +A
Sbjct:   445 MEQGESVFITAHTSAGKTVIA 465

 Score = 44 (20.5 bits), Expect = 0.00023, Sum P(4) = 0.00023
 Identities = 11/36 (30%), Positives = 18/36 (50%)

Query:  1627 IKRLTLQQKAKIKLDFVAPNPG-HHSYALYFMSDAY 1661
             I++L  QQK   ++D +   P   H Y L+  +  Y
Sbjct:   910 IEKLQQQQKQLAQVDCILGEPDIDHYYKLFSQAKKY 945


>UNIPROTKB|D4AE49 [details] [associations]
            symbol:D4AE49 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
            InterPro:IPR012961 Pfam:PF00271 Pfam:PF08148 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
            GeneTree:ENSGT00690000102230 InterPro:IPR025696 Pfam:PF13234
            IPI:IPI00776783 PRIDE:D4AE49 Ensembl:ENSRNOT00000060695
            ArrayExpress:D4AE49 Uniprot:D4AE49
        Length = 764

 Score = 133 (51.9 bits), Expect = 0.00025, Sum P(3) = 0.00025
 Identities = 28/76 (36%), Positives = 46/76 (60%)

Query:  1032 VEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQMLGRA 1091
             +E LF++  I+ L +T T A G+N+PA TV+    + Y+ +  RW+  G  + +QM GRA
Sbjct:   211 IEILFSEGLIKALFATETFAMGINMPARTVLFTNARKYDGKDFRWISSG--EYIQMSGRA 268

Query:  1092 GRPQYDTKGEGVLITN 1107
             GR   D +G  +L+ +
Sbjct:   269 GRRGMDDRGIVILMVD 284

 Score = 52 (23.4 bits), Expect = 0.00025, Sum P(3) = 0.00025
 Identities = 18/49 (36%), Positives = 26/49 (53%)

Query:   588 EDVRLVGLSATLPNYKDVAT-LLRI-KPETGLFYFDNSFRPVALEQQYI 634
             ++V  V LSAT+PN +  A  +  + K    + Y D  +RP  L Q YI
Sbjct:    19 DNVHYVFLSATIPNARQFAEWICHLHKQPCHVIYTD--YRPTPL-QHYI 64

 Score = 52 (23.4 bits), Expect = 0.00025, Sum P(3) = 0.00025
 Identities = 18/49 (36%), Positives = 26/49 (53%)

Query:   844 EDVRLVGLSATLPNYKDVAT-LLRI-KPETGLFYFDNSFRPVALEQQYI 890
             ++V  V LSAT+PN +  A  +  + K    + Y D  +RP  L Q YI
Sbjct:    19 DNVHYVFLSATIPNARQFAEWICHLHKQPCHVIYTD--YRPTPL-QHYI 64

 Score = 44 (20.5 bits), Expect = 0.00025, Sum P(3) = 0.00025
 Identities = 9/19 (47%), Positives = 12/19 (63%)

Query:  1110 ELQYYLSLLNHQLPVESQM 1128
             EL +YL+L    L  +SQM
Sbjct:   366 ELSFYLTLSQSSLKADSQM 384


>UNIPROTKB|E1C287 [details] [associations]
            symbol:E1C287 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] InterPro:IPR011545 Pfam:PF00270
            GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192
            GO:GO:0008026 GeneTree:ENSGT00550000074822 EMBL:AADN02012856
            IPI:IPI00587427 Ensembl:ENSGALT00000009827 OMA:HAVKDES
            Uniprot:E1C287
        Length = 177

 Score = 116 (45.9 bits), Expect = 0.00031, P = 0.00031
 Identities = 42/150 (28%), Positives = 77/150 (51%)

Query:   803 SLVQEMVGNFGKDEIHLLHDE-RGPVLEALIARTIRNIEAT------QEDV---RLVGLS 852
             S+VQ +V  F  DE+H++ DE RG  LE +++R ++ ++++        DV   R V +S
Sbjct:    15 SIVQ-LVRLFLIDEVHVIKDESRGATLEVVVSR-MKTVQSSLWRLSENHDVPPLRFVAVS 72

Query:   853 ATLPNYKDVATLLRI-KPETGLFYFDNSFRPVALEQQYIGV--TEKKALKRFQV-MNDIV 908
             AT+PN +D+A  L   K        D   RPV L +  +G   ++ +   +F + +N  +
Sbjct:    73 ATIPNAEDIAEWLSDGKMPAVCLKVDEDQRPVKLRKIVLGFPCSDSQTEFKFDLTLNYKI 132

Query:   909 YEKVMEHAGRNQLLVFVHSRKETGKTARAI 938
                +  ++ +  +LVF  +RK   + A  +
Sbjct:   133 ASVIQAYSDQKPVLVFCATRKGVQQAASVL 162


>UNIPROTKB|Q8IY21 [details] [associations]
            symbol:DDX60 "Probable ATP-dependent RNA helicase DDX60"
            species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0045087 "innate immune response" evidence=IEA] [GO:0051607
            "defense response to virus" evidence=IEA] [GO:0009615 "response to
            virus" evidence=IDA] [GO:0003725 "double-stranded RNA binding"
            evidence=IDA] [GO:0003690 "double-stranded DNA binding"
            evidence=IDA] [GO:0003727 "single-stranded RNA binding"
            evidence=IDA] [GO:1900245 "positive regulation of MDA-5 signaling
            pathway" evidence=IMP] [GO:1900246 "positive regulation of RIG-I
            signaling pathway" evidence=IMP] [GO:0005737 "cytoplasm"
            evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
            GO:GO:0003727 GO:GO:0045087 GO:GO:0051607 GO:GO:0009615
            GO:GO:0003690 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 EMBL:AC068989 EMBL:BC007820
            EMBL:BC038115 EMBL:AK001649 IPI:IPI00217606 RefSeq:NP_060101.3
            UniGene:Hs.591710 ProteinModelPortal:Q8IY21 SMR:Q8IY21
            IntAct:Q8IY21 STRING:Q8IY21 PhosphoSite:Q8IY21 DMDM:296439377
            PaxDb:Q8IY21 PRIDE:Q8IY21 Ensembl:ENST00000393743 GeneID:55601
            KEGG:hsa:55601 UCSC:uc003irp.3 CTD:55601 GeneCards:GC04M169137
            HGNC:HGNC:25942 HPA:HPA046952 MIM:613974 neXtProt:NX_Q8IY21
            PharmGKB:PA162383444 eggNOG:COG4581 HOGENOM:HOG000169263
            HOVERGEN:HBG107797 InParanoid:Q8IY21 OMA:QDCTYAD OrthoDB:EOG4XSKP0
            PhylomeDB:Q8IY21 GenomeRNAi:55601 NextBio:60142 ArrayExpress:Q8IY21
            Bgee:Q8IY21 CleanEx:HS_DDX60 Genevestigator:Q8IY21 GO:GO:1900245
            GO:GO:1900246 Uniprot:Q8IY21
        Length = 1712

 Score = 125 (49.1 bits), Expect = 0.00031, Sum P(3) = 0.00031
 Identities = 50/201 (24%), Positives = 90/201 (44%)

Query:   831 LIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGLFYFDNSFRPVALEQQYI 890
             L+   +R +E       L  L A     + V+T L+ K ET          P A ++ ++
Sbjct:  1116 LLVEKLRKMEKLPALFFLFKLGAVENAAESVSTFLKKKQET-------KRPPKADKEAHV 1168

Query:   891 GVTEKKALKRFQVMNDIVYEKVMEHAGRNQLLVFVHSRKETGKTARAIRDMCLEKDTLGQ 950
                + + +K+      I+ EK  +   RN     +H  +         +++ + +D    
Sbjct:  1169 MANKLRKVKKSIEKQKIIDEKSQKKT-RNVDQSLIHEAEHDNLVKCLEKNLEIPQDCT-- 1225

Query:   951 FLREGSASMEVLRTEADQVK---NGE-LRDLLPYGFAIHHAGMTRVDRTLVEDLFADRHI 1006
             +  + +   E L+    +VK    GE L+ L   G   HH+ M+  ++ LVE LF   ++
Sbjct:  1226 YADQKAVDTETLQKVFGRVKFERKGEELKALAERGIGYHHSAMSFKEKQLVEILFRKGYL 1285

Query:  1007 QVLVSTATLAWGVNLPAHTVV 1027
             +V+ +T TLA GVN+P  +VV
Sbjct:  1286 RVVTATGTLALGVNMPCKSVV 1306

 Score = 75 (31.5 bits), Expect = 0.00031, Sum P(3) = 0.00031
 Identities = 18/59 (30%), Positives = 36/59 (61%)

Query:   494 LESDENLLLCAPTGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEM 552
             ++ +E+ ++ APT +GKT  +  CM +++ K  + DG +       +YVAP ++LV ++
Sbjct:   775 VDKNESAVIVAPTSSGKTYASYYCM-EKVLKESD-DGVV-------VYVAPTKALVNQV 824

 Score = 40 (19.1 bits), Expect = 0.00031, Sum P(3) = 0.00031
 Identities = 11/33 (33%), Positives = 17/33 (51%)

Query:   793 FKIIYVAPMRSLVQEMVGNFGKDEIHLLHDERG 825
             F+I+ +AP R    + +     DE+H L  E G
Sbjct:   867 FEILLLAPHRQNWVKKIRYVIFDEVHCLGGEIG 899


>ZFIN|ZDB-GENE-040426-2854 [details] [associations]
            symbol:skiv2l2 "superkiller viralicidic activity
            2-like 2" species:7955 "Danio rerio" [GO:0016818 "hydrolase
            activity, acting on acid anhydrides, in phosphorus-containing
            anhydrides" evidence=IEA] [GO:0004386 "helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0016817 "hydrolase activity,
            acting on acid anhydrides" evidence=IEA] [GO:0005575
            "cellular_component" evidence=ND] [GO:0031101 "fin regeneration"
            evidence=IMP] [GO:0051781 "positive regulation of cell division"
            evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
            InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
            PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490
            ZFIN:ZDB-GENE-040426-2854 GO:GO:0005524 GO:GO:0051781 GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031101
            GO:GO:0008026 eggNOG:COG4581 HOGENOM:HOG000163047 KO:K12598
            InterPro:IPR025696 Pfam:PF13234 CTD:23517 HOVERGEN:HBG104255
            OrthoDB:EOG4D52WW EMBL:BC061456 IPI:IPI00481753 RefSeq:NP_999933.1
            UniGene:Dr.75715 ProteinModelPortal:Q6P7X6 STRING:Q6P7X6
            PRIDE:Q6P7X6 GeneID:406795 KEGG:dre:406795 NextBio:20818305
            Bgee:Q6P7X6 Uniprot:Q6P7X6
        Length = 1034

 Score = 124 (48.7 bits), Expect = 0.00051, Sum P(4) = 0.00051
 Identities = 25/69 (36%), Positives = 42/69 (60%)

Query:  1032 VEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGRWVELGALDVLQMLGRA 1091
             +E LF++  ++ L +T T A G+N+PA TV+    + ++ +  RW+  G  + +QM GRA
Sbjct:   460 IEILFSEGLLKALFATETFAMGINMPARTVLFTSARKFDGKDFRWISSG--EYIQMSGRA 517

Query:  1092 GRPQYDTKG 1100
             GR   D +G
Sbjct:   518 GRRGMDERG 526

 Score = 67 (28.6 bits), Expect = 0.00051, Sum P(4) = 0.00051
 Identities = 29/79 (36%), Positives = 38/79 (48%)

Query:   559 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVAT-LLRI-KPET 615
             DEIH + D ERG V E  I           ++V  V LSAT+PN +  A  +  + K   
Sbjct:   240 DEIHYMRDSERGVVWEETII-------LLPDNVHHVFLSATVPNARQFAEWICHLHKQPC 292

Query:   616 GLFYFDNSFRPVALEQQYI 634
              + Y D  +RP  L Q YI
Sbjct:   293 HVVYTD--YRPTPL-QHYI 308

 Score = 67 (28.6 bits), Expect = 0.00051, Sum P(4) = 0.00051
 Identities = 29/79 (36%), Positives = 38/79 (48%)

Query:   815 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVAT-LLRI-KPET 871
             DEIH + D ERG V E  I           ++V  V LSAT+PN +  A  +  + K   
Sbjct:   240 DEIHYMRDSERGVVWEETII-------LLPDNVHHVFLSATVPNARQFAEWICHLHKQPC 292

Query:   872 GLFYFDNSFRPVALEQQYI 890
              + Y D  +RP  L Q YI
Sbjct:   293 HVVYTD--YRPTPL-QHYI 308

 Score = 43 (20.2 bits), Expect = 0.00051, Sum P(4) = 0.00051
 Identities = 14/45 (31%), Positives = 24/45 (53%)

Query:  1401 RVPKLGKTIHKYVHQFPKLELATHIQPITRSTLRVELTISPDFQW 1445
             ++ KLGK I +++H+ P+  L   +QP     ++ E     DF W
Sbjct:   625 QLAKLGKEIEEFIHK-PRYCLP-FLQPGRLVKVKKE---DLDFGW 664

 Score = 41 (19.5 bits), Expect = 0.00051, Sum P(4) = 0.00051
 Identities = 7/18 (38%), Positives = 15/18 (83%)

Query:   494 LESDENLLLCAPTGAGKT 511
             +++++++L+ A T AGKT
Sbjct:   139 IDNNQSVLVSAHTSAGKT 156

 Score = 40 (19.1 bits), Expect = 0.00063, Sum P(4) = 0.00063
 Identities = 15/47 (31%), Positives = 20/47 (42%)

Query:    40 VCSLVGKLEGTRMGDRFMRTKPIKAEERKVKRQKRDEAQYDFTRMKG 86
             VC+        R   R + T PIKA   +  R+  +E Q D   M G
Sbjct:   157 VCAEYAIALALREKQRVIFTSPIKALSNQKYREMYEEFQ-DVGLMTG 202


>FB|FBgn0039117 [details] [associations]
            symbol:tst "twister" species:7227 "Drosophila melanogaster"
            [GO:0004386 "helicase activity" evidence=ISS] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
            via spliceosome" evidence=IMP] [GO:0005634 "nucleus" evidence=IC]
            InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012961
            InterPro:IPR016438 Pfam:PF00270 Pfam:PF00271 Pfam:PF08148
            PIRSF:PIRSF005198 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381
            eggNOG:COG4581 InterPro:IPR025696 Pfam:PF13234 EMBL:AJ276896
            ProteinModelPortal:Q9BI21 SMR:Q9BI21 STRING:Q9BI21 PaxDb:Q9BI21
            PRIDE:Q9BI21 FlyBase:FBgn0039117 InParanoid:Q9BI21
            OrthoDB:EOG46HDRK ArrayExpress:Q9BI21 Bgee:Q9BI21 Uniprot:Q9BI21
        Length = 1197

 Score = 127 (49.8 bits), Expect = 0.00059, Sum P(4) = 0.00059
 Identities = 36/110 (32%), Positives = 61/110 (55%)

Query:  1003 DRHI-QVLVSTATLAWGVNLPAHTVVD--RTLVEDLFADRHIQVLVSTATLAWGVNLPAH 1059
             DR I QVLV    L  G+ +    ++   + +VE LF +  +++L +T T A GVN+PA 
Sbjct:   565 DRTIPQVLVLKDALERGIGVHHSGILPILKEIVEMLFQNGLVKLLFATETFAMGVNMPAR 624

Query:  1060 TVIIKGTQIYNPEKGRWVELGALDVLQMLGRAGRPQYDTKGEGVLITNHS 1109
             TV+    + ++  + R ++ G  + +QM GRAGR  +D  G  +++   S
Sbjct:   625 TVVFDSCKKFDGLEMRNLKPG--EYIQMAGRAGRRGHDETGTAIIMCKGS 672

 Score = 68 (29.0 bits), Expect = 0.00059, Sum P(4) = 0.00059
 Identities = 25/83 (30%), Positives = 39/83 (46%)

Query:   559 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGL 617
             DE+H +++ ERG V E +I           E V ++ LSAT+PN  ++A  +    +  +
Sbjct:   375 DEVHYINNPERGHVWEEVII-------LLPEHVNIIMLSATVPNTLELADWVGSTKKRKV 427

Query:   618 FYFDNSFRPVALEQ-QYIGVTEK 639
             +      RPV L    Y G   K
Sbjct:   428 YVISTLKRPVPLTHFLYTGAGGK 450

 Score = 68 (29.0 bits), Expect = 0.00059, Sum P(4) = 0.00059
 Identities = 25/83 (30%), Positives = 39/83 (46%)

Query:   815 DEIHLLHD-ERGPVLEALIARTIRNIEATQEDVRLVGLSATLPNYKDVATLLRIKPETGL 873
             DE+H +++ ERG V E +I           E V ++ LSAT+PN  ++A  +    +  +
Sbjct:   375 DEVHYINNPERGHVWEEVII-------LLPEHVNIIMLSATVPNTLELADWVGSTKKRKV 427

Query:   874 FYFDNSFRPVALEQ-QYIGVTEK 895
             +      RPV L    Y G   K
Sbjct:   428 YVISTLKRPVPLTHFLYTGAGGK 450

 Score = 43 (20.2 bits), Expect = 0.00059, Sum P(4) = 0.00059
 Identities = 18/65 (27%), Positives = 30/65 (46%)

Query:   494 LESDENLLLCAPTGAGKTNVALLCMLQEIGKHINADGTINADEFKIIYVAPMRSLVQEMV 553
             LE  + + + A T AGKT VA   +   + K          D  + IY +P+++L  +  
Sbjct:   274 LEQRQYVFVAAHTSAGKTVVAEYAIA--LSKR---------DLTRTIYTSPIKALSNQKY 322

Query:   554 GNFGK 558
              +F K
Sbjct:   323 RDFRK 327

 Score = 39 (18.8 bits), Expect = 0.00059, Sum P(4) = 0.00059
 Identities = 9/49 (18%), Positives = 21/49 (42%)

Query:  1395 EIGELIRVPKLGKTIHKYVHQFPKLELATHIQPITRSTLRVELTISPDF 1443
             ++GE +    +     ++   + +  L  HI+ +        LT+ PD+
Sbjct:   960 KVGEFLPHTNIAGFEQEFAKVYERRMLEIHIEELRFKNSARNLTLYPDY 1008


>UNIPROTKB|F1P0I1 [details] [associations]
            symbol:F1P0I1 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
            binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0051607 "defense response to virus" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS51194 GO:GO:0005524 GO:GO:0005737 GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            OMA:QDCTYAD GeneTree:ENSGT00690000102154 EMBL:AADN02016399
            IPI:IPI00595626 Ensembl:ENSGALT00000015699 Uniprot:F1P0I1
        Length = 1313

 Score = 101 (40.6 bits), Expect = 0.00095, Sum P(3) = 0.00095
 Identities = 24/59 (40%), Positives = 34/59 (57%)

Query:   981 GFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVVDRTLVED-LFAD 1038
             G   HH  M   +R  VE LF   +I+V+ +T+TLA G+N+P  +VV     ED +F D
Sbjct:  1249 GIGYHHGAMAMKERQTVEMLFRLGYIKVVTATSTLALGINMPCRSVV---FAEDSVFLD 1304

 Score = 94 (38.1 bits), Expect = 0.00095, Sum P(3) = 0.00095
 Identities = 31/90 (34%), Positives = 51/90 (56%)

Query:   466 DKLPRYVQHAFEDFKTLNRIQSRLCKSALESDENLLLCAPTGAGKTNVALLCMLQEIGKH 525
             D  PR VQH   D  T  R    L   A++++E+ ++ APT +GKT  +  CM +++ K 
Sbjct:   733 DPDPR-VQHFIPD--TWQR---ELL-DAVDNNESAVIVAPTSSGKTYASYYCM-EKVLKM 784

Query:   526 INADGTINADEFKIIYVAPMRSLVQEMVGN 555
                     +DE  ++YVAP ++LV ++VG+
Sbjct:   785 --------SDEGVVVYVAPTKALVNQVVGS 806

 Score = 37 (18.1 bits), Expect = 0.00095, Sum P(3) = 0.00095
 Identities = 13/24 (54%), Positives = 14/24 (58%)

Query:   815 DEIHLLHDERGP-VLEALIARTIR 837
             DEIH L  E G  V E L+  TIR
Sbjct:   868 DEIHCLGGEIGAEVWEHLLV-TIR 890


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.320   0.136   0.396    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0     1689      1586   0.00082  125 3  11 22  0.38    34
                                                     40  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  145
  No. of states in DFA:  628 (67 KB)
  Total size of DFA:  622 KB (2275 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  125.53u 0.12s 125.65t   Elapsed:  00:00:23
  Total cpu time:  125.65u 0.12s 125.77t   Elapsed:  00:00:23
  Start:  Thu Aug 15 16:03:08 2013   End:  Thu Aug 15 16:03:31 2013
WARNINGS ISSUED:  1
the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data


Symbol, full name	Information	P value
BLAST match view associations BLAST with l(3)72Ab l(3)72Ab l(3)72Ab lethal (3) 72Ab	protein from Drosophila melanogaster	0.
BLAST match view associations BLAST with SNRNP200 SNRNP200 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase	protein from Homo sapiens	0.
BLAST match view associations BLAST with SNRNP200 SNRNP200 SNRNP200 Uncharacterized protein	protein from Bos taurus	0.
BLAST match view associations BLAST with snrnp200 snrnp200 snrnp200 small nuclear ribonucleoprotein 200 (U5)	gene_product from Danio rerio	0.
BLAST match view associations BLAST with F1SU44 F1SU44 F1SU44 Uncharacterized protein	protein from Sus scrofa	0.
BLAST match view associations BLAST with snrp-200 snrp-200 snrp-200	gene from Caenorhabditis elegans	0.
BLAST match view associations BLAST with Y46G5A.4 Y46G5A.4 Y46G5A.4 Putative U5 small nuclear ribonucleoprotein 200 kDa helicase	protein from Caenorhabditis elegans	0.
BLAST match view associations BLAST with emb1507 emb1507 emb1507 embryo defective 1507	protein from Arabidopsis thaliana	0.
BLAST match view associations BLAST with AT2G42270 AT2G42270 AT2G42270	protein from Arabidopsis thaliana	0.
BLAST match view associations BLAST with ascc3l ascc3l ascc3l U5 small nuclear ribonucleoprotein 200 kDa helicase	gene from Dictyostelium discoideum	0.
BLAST match view associations BLAST with orf19.3098 orf19.3098 orf19.3098	gene_product from Candida albicans	3.1e-238
BLAST match view associations BLAST with SNRNP200 SNRNP200 SNRNP200 U5 small nuclear ribonucleoprotein 200 kDa helicase	protein from Homo sapiens	6.1e-225
BLAST match view associations BLAST with BRR2 BRR2 BRR2 RNA-dependent ATPase RNA helicase (DEIH box)	gene from Saccharomyces cerevisiae	2.2e-221
BLAST match view associations BLAST with ascc3 ascc3 ascc3 Activating signal cointegrator 1 complex subunit 3	protein from Gallus gallus	2.3e-199
BLAST match view associations BLAST with ascc3 ascc3 ascc3 Activating signal cointegrator 1 complex subunit 3	protein from Bos taurus	1.4e-197
BLAST match view associations BLAST with ASCC3 ASCC3 ASCC3 Uncharacterized protein	protein from Canis lupus familiaris	1.8e-197
BLAST match view associations BLAST with PFD1060w PFD1060w PFD1060w u5 small nuclear ribonucleoprotein-specific protein, putative	gene from Plasmodium falciparum	5.9e-197
BLAST match view associations BLAST with PFD1060w PFD1060w PFD1060w U5 small nuclear ribonucleoprotein-specific protein, putative	protein from Plasmodium falciparum 3D7	5.9e-197
BLAST match view associations BLAST with ASCC3 ASCC3 ASCC3 Activating signal cointegrator 1 complex subunit 3	protein from Homo sapiens	6.6e-191
BLAST match view associations BLAST with ascc3 ascc3 ascc3 activating signal cointegrator 1 complex subunit	gene from Dictyostelium discoideum	4.8e-186
BLAST match view associations BLAST with CG5205 CG5205 CG5205	protein from Drosophila melanogaster	1.3e-183
BLAST match view associations BLAST with ASCC3 ASCC3 ASCC3 Uncharacterized protein	protein from Canis lupus familiaris	1.1e-179
BLAST match view associations BLAST with H9KZ72 H9KZ72 H9KZ72 Uncharacterized protein	protein from Gallus gallus	3.5e-176
BLAST match view associations BLAST with Ascc3 Ascc3 Ascc3 activating signal cointegrator 1 complex subunit 3	protein from Mus musculus	6.3e-170
BLAST match view associations BLAST with Ascc3 Ascc3 Ascc3 activating signal cointegrator 1 complex subunit 3	gene from Rattus norvegicus	1.2e-169
BLAST match view associations BLAST with MGG_06124 MGG_06124 MGG_06124 Activating signal cointegrator 1 complex subunit 3	protein from Magnaporthe oryzae 70-15	4.3e-168
BLAST match view associations BLAST with Y54E2A.4 Y54E2A.4 Y54E2A.4	gene from Caenorhabditis elegans	9.9e-158
BLAST match view associations BLAST with orf19.3980 orf19.3980 orf19.3980	gene_product from Candida albicans	4.6e-133
BLAST match view associations BLAST with SLH1 SLH1 SLH1 Putative RNA helicase related to Ski2p	gene from Saccharomyces cerevisiae	7.2e-125
BLAST match view associations BLAST with PF14_0370 PF14_0370 PF14_0370 RNA helicase, putative	gene from Plasmodium falciparum	3.0e-94
BLAST match view associations BLAST with PF14_0370 PF14_0370 PF14_0370 DEAD/DEAH box helicase, putative	protein from Plasmodium falciparum 3D7	3.0e-94
BLAST match view associations BLAST with SNRNP200 SNRNP200 SNRNP200 Uncharacterized protein	protein from Sus scrofa	3.1e-90
BLAST match view associations BLAST with Hfm1 Hfm1 Hfm1 HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)	gene from Rattus norvegicus	7.9e-68
BLAST match view associations BLAST with SNRNP200 SNRNP200 SNRNP200 cDNA FLJ56901, highly similar to U5 small nuclear ribonucleoprotein 200 kDa helicase (EC 3.6.1.-)	protein from Homo sapiens	2.6e-67
BLAST match view associations BLAST with HFM1 HFM1 HFM1 Probable ATP-dependent DNA helicase HFM1	protein from Homo sapiens	8.5e-65
BLAST match view associations BLAST with RCK RCK RCK AT3G27730	protein from Arabidopsis thaliana	4.4e-64
BLAST match view associations BLAST with HFM1 HFM1 HFM1 Uncharacterized protein	protein from Bos taurus	6.7e-63
BLAST match view associations BLAST with HFM1 HFM1 HFM1 Uncharacterized protein	protein from Sus scrofa	1.3e-61
BLAST match view associations BLAST with HFM1 HFM1 HFM1 Uncharacterized protein	protein from Canis lupus familiaris	1.7e-61
BLAST match view associations BLAST with HFM1 HFM1 HFM1 Uncharacterized protein	protein from Canis lupus familiaris	2.0e-61
BLAST match view associations BLAST with HFM1 HFM1 HFM1 Probable ATP-dependent DNA helicase HFM1	protein from Homo sapiens	1.5e-57
BLAST match view associations BLAST with hfm1 hfm1 hfm1 HFM1, ATP-dependent DNA helicase homolog (S. cerevisiae)	gene_product from Danio rerio	1.7e-57
BLAST match view associations BLAST with HFM1 HFM1 HFM1 Meiosis specific DNA helicase	gene from Saccharomyces cerevisiae	1.1e-50
BLAST match view associations BLAST with MGG_05900 MGG_05900 MGG_05900 Uncharacterized protein	protein from Magnaporthe oryzae 70-15	1.1e-48
BLAST match view associations BLAST with LOC100525691 LOC100525691 LOC100525691 Uncharacterized protein	protein from Sus scrofa	1.4e-48
BLAST match view associations BLAST with Snrnp200 Snrnp200 Snrnp200 small nuclear ribonucleoprotein 200 (U5)	gene from Rattus norvegicus	6.7e-48
BLAST match view associations BLAST with I3LAH4 I3LAH4 I3LAH4 Uncharacterized protein	protein from Sus scrofa	6.0e-39
BLAST match view associations BLAST with LOC100517018 LOC100517018 LOC100517018 Uncharacterized protein	protein from Sus scrofa	1.2e-27
BLAST match view associations BLAST with I3LAA7 I3LAA7 I3LAA7 Uncharacterized protein	protein from Sus scrofa	2.4e-24
BLAST match view associations BLAST with I3LVA7 I3LVA7 I3LVA7 Uncharacterized protein	protein from Sus scrofa	1.5e-22
BLAST match view associations BLAST with helq-1 helq-1 helq-1	gene from Caenorhabditis elegans	3.0e-17
BLAST match view associations BLAST with I3L8F4 I3L8F4 I3L8F4 Uncharacterized protein	protein from Sus scrofa	2.9e-16
BLAST match view associations BLAST with Polq Polq Polq polymerase (DNA directed), theta	gene from Rattus norvegicus	2.7e-15
BLAST match view associations BLAST with Helq Helq Helq helicase, POLQ-like	protein from Mus musculus	1.1e-14
BLAST match view associations BLAST with POLQ POLQ POLQ Uncharacterized protein	protein from Canis lupus familiaris	1.3e-14
BLAST match view associations BLAST with POLQ POLQ POLQ DNA polymerase theta	protein from Homo sapiens	4.1e-14
BLAST match view associations BLAST with HELQ HELQ HELQ Uncharacterized protein	protein from Sus scrofa	1.4e-13
BLAST match view associations BLAST with HELQ HELQ HELQ Uncharacterized protein	protein from Canis lupus familiaris	2.3e-13
BLAST match view associations BLAST with HELQ HELQ HELQ Helicase POLQ-like	protein from Homo sapiens	2.6e-13
BLAST match view associations BLAST with HELQ HELQ HELQ Helicase POLQ-like	protein from Homo sapiens	4.4e-13
BLAST match view associations BLAST with HELQ HELQ HELQ Uncharacterized protein	protein from Gallus gallus	4.5e-13
BLAST match view associations BLAST with HELQ HELQ HELQ Uncharacterized protein	protein from Canis lupus familiaris	6.1e-13
BLAST match view associations BLAST with si:rp71-1p14.5 si:rp71-1p14.5 si:rp71-1p14.5	gene_product from Danio rerio	1.6e-12
BLAST match view associations BLAST with polq-1 polq-1 polq-1	gene from Caenorhabditis elegans	1.9e-12
BLAST match view associations BLAST with helq helq helq helicase, POLQ-like	gene_product from Danio rerio	4.7e-12
BLAST match view associations BLAST with helY helY helY Probable helicase HelY	protein from Mycobacterium tuberculosis	6.1e-12
BLAST match view associations BLAST with PF13_0102 PF13_0102 PF13_0102 DNAJ-like Sec63 homologue	gene from Plasmodium falciparum	1.0e-11
BLAST match view associations BLAST with PF13_0102 PF13_0102 PF13_0102 DnaJ/SEC63 protein, putative	protein from Plasmodium falciparum 3D7	1.0e-11
BLAST match view associations BLAST with mus308 mus308 mus308 mutagen-sensitive 308	protein from Drosophila melanogaster	1.9e-11
BLAST match view associations BLAST with DDB_G0279107 DDB_G0279107 DDB_G0279107 Helicase POLQ-like	gene from Dictyostelium discoideum	2.0e-11
BLAST match view associations BLAST with POLQ POLQ POLQ Uncharacterized protein	protein from Gallus gallus	1.8e-10
BLAST match view associations BLAST with AT4G32700 AT4G32700 AT4G32700	protein from Arabidopsis thaliana	2.1e-10
BLAST match view associations BLAST with sec63 sec63 sec63 SEC63-like (S. cerevisiae)	gene_product from Danio rerio	3.6e-09
BLAST match view associations BLAST with SEC63 SEC63 SEC63 Uncharacterized protein	protein from Gallus gallus	5.4e-09
BLAST match view associations BLAST with SEC63 SEC63 SEC63 Translocation protein SEC63 homolog	protein from Canis lupus familiaris	5.5e-09
BLAST match view associations BLAST with PFF0100w PFF0100w PFF0100w putative ATP dependent RNA helicase	gene from Plasmodium falciparum	1.3e-08
BLAST match view associations BLAST with SEC63 SEC63 SEC63 Uncharacterized protein	protein from Bos taurus	1.5e-08
BLAST match view associations BLAST with SEC63 SEC63 SEC63 Translocation protein SEC63 homolog	protein from Homo sapiens	1.5e-08
BLAST match view associations BLAST with Sec63 Sec63 Sec63 SEC63-like (S. cerevisiae)	protein from Mus musculus	1.5e-08
BLAST match view associations BLAST with POLQ POLQ POLQ Uncharacterized protein	protein from Bos taurus	3.6e-08
BLAST match view associations BLAST with MTR4 MTR4 MTR4 homolog of yeast MTR4	protein from Arabidopsis thaliana	5.5e-08
BLAST match view associations BLAST with AT3G28870 AT3G28870 AT3G28870	protein from Arabidopsis thaliana	6.0e-08
BLAST match view associations BLAST with sec63 sec63 sec63	protein from Drosophila melanogaster	1.3e-07
BLAST match view associations BLAST with skih-2 skih-2 skih-2	gene from Caenorhabditis elegans	1.4e-07
BLAST match view associations BLAST with mus301 mus301 mus301 mutagen-sensitive 301	protein from Drosophila melanogaster	1.4e-07