BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14584
(563 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9I8T7|BMAL1_CHICK Aryl hydrocarbon receptor nuclear translocator-like protein 1
OS=Gallus gallus GN=ARNTL PE=1 SV=1
Length = 633
Score = 249 bits (635), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 160/434 (36%), Positives = 216/434 (49%), Gaps = 154/434 (35%)
Query: 218 SRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSY 277
+R+ HS+IEKRRRDKMN++I EL+++VP C+AMSRKLDKLTVLRMAVQH+KT+RGA + Y
Sbjct: 80 AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY 139
Query: 278 TEGHYKPAFLTDQELKHLILQAAEGFL--------------------QNHSEIE------ 311
TE +YKPAFL+D ELKHLIL+AA+GFL N+S+ +
Sbjct: 140 TEANYKPAFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSL 199
Query: 312 ------------KRRRDKMNTYITELSAMVPTLLPVKTADIPAEVSRLCPGARRSFFCRM 359
K + +T E T LPVKT DI SRLC GARRSFFCRM
Sbjct: 200 FDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKT-DITPGPSRLCSGARRSFFCRM 258
Query: 360 KCKHTPASSSSSSSSNSAPSTQPGPNTPSPGTGSCVKEEPDTTTGAAASCHRKKKQQQSD 419
KC N PS VK E ++C +KK ++S
Sbjct: 259 KC-----------------------NRPS------VKVE---DKDFPSTCSKKKADRKS- 285
Query: 420 RKYSVIQCTGYLKSWAPAKMGLEESEDRKYSVIQCTGYLKSWAPAKMGLEESEGEGEGGE 479
+ I TGYLKSW P KMGL+ E++E + EG
Sbjct: 286 --FCTIHSTGYLKSWPPTKMGLD--------------------------EDNEPDNEG-- 315
Query: 480 TCTLSCLVAVGRVLADKT-RILNKQVNLRPIQFLSRHALDGKFLFV-------------- 524
C LSCLVA+GR+ + +N ++ ++P +++SRHA+DGKF+FV
Sbjct: 316 -CNLSCLVAIGRLHPHVVPQPVNGEIRVKPTEYVSRHAIDGKFVFVDQRATAILAYLPQE 374
Query: 525 ------------------------------------YQFKNKGGTYVQLQSEWKNFRNPW 548
Y+FK K G+++ L+S W +F NPW
Sbjct: 375 LLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNPW 434
Query: 549 TKDIEYLISKNTLI 562
TK++EY++S NT++
Sbjct: 435 TKEVEYIVSTNTVV 448
Score = 68.9 bits (167), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 40/51 (78%), Gaps = 5/51 (9%)
Query: 167 AQGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQVIVGLPV 217
+Q +L+GQS FD LHPKD+AKVKEQL SSD +PRERLID K+ GLPV
Sbjct: 190 SQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKT-----GLPV 235
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 37/50 (74%), Gaps = 6/50 (12%)
Query: 288 TDQELKHLILQAAE--GFLQN----HSEIEKRRRDKMNTYITELSAMVPT 331
TD++ +H L A+ G ++N HS+IEKRRRDKMN++I EL+++VPT
Sbjct: 59 TDKDDQHGRLDYADQQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPT 108
>sp|Q6YGZ5|BMAL1_TYTAL Aryl hydrocarbon receptor nuclear translocator-like protein 1
OS=Tyto alba GN=ARNTL PE=2 SV=1
Length = 633
Score = 248 bits (634), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 160/434 (36%), Positives = 216/434 (49%), Gaps = 154/434 (35%)
Query: 218 SRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSY 277
+R+ HS+IEKRRRDKMN++I EL+++VP C+AMSRKLDKLTVLRMAVQH+KT+RGA + Y
Sbjct: 80 AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY 139
Query: 278 TEGHYKPAFLTDQELKHLILQAAEGFL--------------------QNHSEIE------ 311
TE +YKPAFL+D ELKHLIL+AA+GFL N+S+ +
Sbjct: 140 TEANYKPAFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSL 199
Query: 312 ------------KRRRDKMNTYITELSAMVPTLLPVKTADIPAEVSRLCPGARRSFFCRM 359
K + +T E T LPVKT DI SRLC GARRSFFCRM
Sbjct: 200 FDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKT-DITPGPSRLCSGARRSFFCRM 258
Query: 360 KCKHTPASSSSSSSSNSAPSTQPGPNTPSPGTGSCVKEEPDTTTGAAASCHRKKKQQQSD 419
KC N PS VK E ++C +KK ++S
Sbjct: 259 KC-----------------------NRPS------VKVE---DKDFPSTCSKKKADRKS- 285
Query: 420 RKYSVIQCTGYLKSWAPAKMGLEESEDRKYSVIQCTGYLKSWAPAKMGLEESEGEGEGGE 479
+ I TGYLKSW P KMGL+ E++E + EG
Sbjct: 286 --FCTIHSTGYLKSWPPTKMGLD--------------------------EDNEPDNEG-- 315
Query: 480 TCTLSCLVAVGRVLADKT-RILNKQVNLRPIQFLSRHALDGKFLFV-------------- 524
C LSCLVA+GR+ + +N ++ ++P +++SRHA+DGKF+FV
Sbjct: 316 -CNLSCLVAIGRLHPHVVPQPVNGEIRVKPTEYVSRHAIDGKFVFVDQRATAILAYLPQE 374
Query: 525 ------------------------------------YQFKNKGGTYVQLQSEWKNFRNPW 548
Y+FK K G+++ L+S W +F NPW
Sbjct: 375 LLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNPW 434
Query: 549 TKDIEYLISKNTLI 562
TK++EY++S NT++
Sbjct: 435 TKEVEYIVSTNTVV 448
Score = 68.9 bits (167), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 40/51 (78%), Gaps = 5/51 (9%)
Query: 167 AQGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQVIVGLPV 217
+Q +L+GQS FD LHPKD+AKVKEQL SSD +PRERLID K+ GLPV
Sbjct: 190 SQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKT-----GLPV 235
Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 37/50 (74%), Gaps = 6/50 (12%)
Query: 288 TDQELKHLILQAAE--GFLQN----HSEIEKRRRDKMNTYITELSAMVPT 331
TD++ +H L+ + G ++N HS+IEKRRRDKMN++I EL+++VPT
Sbjct: 59 TDKDDQHGRLEYTDQQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPT 108
>sp|O88529|BMAL1_MESAU Aryl hydrocarbon receptor nuclear translocator-like protein 1
OS=Mesocricetus auratus GN=ARNTL PE=2 SV=1
Length = 626
Score = 248 bits (632), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 160/435 (36%), Positives = 218/435 (50%), Gaps = 154/435 (35%)
Query: 218 SRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSY 277
+R+ HS+IEKRRRDKMN++I EL+++VP C+AMSRKLDKLTVLRMAVQH+KT+RGA + Y
Sbjct: 73 AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY 132
Query: 278 TEGHYKPAFLTDQELKHLILQAAEGFL--------------------QNHSEIE------ 311
TE +YKP FL+D ELKHLIL+AA+GFL N+S+ +
Sbjct: 133 TEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSL 192
Query: 312 ------------KRRRDKMNTYITELSAMVPTLLPVKTADIPAEVSRLCPGARRSFFCRM 359
K + +T E T LPVKT DI SRLC GARRSFFCRM
Sbjct: 193 FDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKT-DITPGPSRLCSGARRSFFCRM 251
Query: 360 KCKHTPASSSSSSSSNSAPSTQPGPNTPSPGTGSCVKEEPDTTTGAAASCHRKKKQQQSD 419
KC N PS VK E A++C +KK ++S
Sbjct: 252 KC-----------------------NRPS------VKVE---DKDFASTCSKKKADRKS- 278
Query: 420 RKYSVIQCTGYLKSWAPAKMGLEESEDRKYSVIQCTGYLKSWAPAKMGLEESEGEGEGGE 479
+ I TGYLKSW P KMGL+ E++E + EG
Sbjct: 279 --FCTIHSTGYLKSWPPTKMGLD--------------------------EDNEPDNEG-- 308
Query: 480 TCTLSCLVAVGRVLADKT-RILNKQVNLRPIQFLSRHALDGKFLFV-------------- 524
C LSCLVA+GR+ + + +N ++ ++ ++++SRHA+DGKF+FV
Sbjct: 309 -CNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQE 367
Query: 525 ------------------------------------YQFKNKGGTYVQLQSEWKNFRNPW 548
Y+FK K G+++ L+S W +F NPW
Sbjct: 368 LLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNPW 427
Query: 549 TKDIEYLISKNTLIL 563
TK++EY++S NT++L
Sbjct: 428 TKEVEYIVSTNTVVL 442
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 40/51 (78%), Gaps = 5/51 (9%)
Query: 167 AQGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQVIVGLPV 217
+Q +L+GQS FD LHPKD+AKVKEQL SSD +PRERLID K+ GLPV
Sbjct: 183 SQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKT-----GLPV 228
Score = 49.7 bits (117), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 40/56 (71%), Gaps = 6/56 (10%)
Query: 282 YKPAFLTDQELKHLILQAAE--GFLQN----HSEIEKRRRDKMNTYITELSAMVPT 331
Y+ + TD++ H L+ AE G ++N HS+IEKRRRDKMN++I EL+++VPT
Sbjct: 46 YQESMDTDKDDPHGRLEYAEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPT 101
>sp|O00327|BMAL1_HUMAN Aryl hydrocarbon receptor nuclear translocator-like protein 1
OS=Homo sapiens GN=ARNTL PE=1 SV=2
Length = 626
Score = 246 bits (627), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 159/435 (36%), Positives = 217/435 (49%), Gaps = 154/435 (35%)
Query: 218 SRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSY 277
+R+ HS+IEKRRRDKMN++I EL+++VP C+AMSRKLDKLTVLRMAVQH+KT+RGA + Y
Sbjct: 73 AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY 132
Query: 278 TEGHYKPAFLTDQELKHLILQAAEGFL--------------------QNHSEIE------ 311
TE +YKP FL+D ELKHLIL+AA+GFL N+S+ +
Sbjct: 133 TEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSL 192
Query: 312 ------------KRRRDKMNTYITELSAMVPTLLPVKTADIPAEVSRLCPGARRSFFCRM 359
K + +T E T LPVKT DI SRLC GARRSFFCRM
Sbjct: 193 FDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKT-DITPGPSRLCSGARRSFFCRM 251
Query: 360 KCKHTPASSSSSSSSNSAPSTQPGPNTPSPGTGSCVKEEPDTTTGAAASCHRKKKQQQSD 419
KC N PS VK E ++C +KK ++S
Sbjct: 252 KC-----------------------NRPS------VKVE---DKDFPSTCSKKKADRKS- 278
Query: 420 RKYSVIQCTGYLKSWAPAKMGLEESEDRKYSVIQCTGYLKSWAPAKMGLEESEGEGEGGE 479
+ I TGYLKSW P KMGL+ E++E + EG
Sbjct: 279 --FCTIHSTGYLKSWPPTKMGLD--------------------------EDNEPDNEG-- 308
Query: 480 TCTLSCLVAVGRVLADKT-RILNKQVNLRPIQFLSRHALDGKFLFV-------------- 524
C LSCLVA+GR+ + + +N ++ ++ ++++SRHA+DGKF+FV
Sbjct: 309 -CNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQE 367
Query: 525 ------------------------------------YQFKNKGGTYVQLQSEWKNFRNPW 548
Y+FK K G+++ L+S W +F NPW
Sbjct: 368 LLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNPW 427
Query: 549 TKDIEYLISKNTLIL 563
TK++EY++S NT++L
Sbjct: 428 TKEVEYIVSTNTVVL 442
Score = 68.9 bits (167), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 40/51 (78%), Gaps = 5/51 (9%)
Query: 167 AQGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQVIVGLPV 217
+Q +L+GQS FD LHPKD+AKVKEQL SSD +PRERLID K+ GLPV
Sbjct: 183 SQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKT-----GLPV 228
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 39/56 (69%), Gaps = 6/56 (10%)
Query: 282 YKPAFLTDQELKHLILQAAE--GFLQN----HSEIEKRRRDKMNTYITELSAMVPT 331
Y+ + TD++ H L+ E G ++N HS+IEKRRRDKMN++I EL+++VPT
Sbjct: 46 YQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPT 101
>sp|A0MLS5|BMAL1_HORSE Aryl hydrocarbon receptor nuclear translocator-like protein 1
OS=Equus caballus GN=ARNTL PE=2 SV=1
Length = 626
Score = 246 bits (627), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 159/435 (36%), Positives = 217/435 (49%), Gaps = 154/435 (35%)
Query: 218 SRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSY 277
+R+ HS+IEKRRRDKMN++I EL+++VP C+AMSRKLDKLTVLRMAVQH+KT+RGA + Y
Sbjct: 73 AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY 132
Query: 278 TEGHYKPAFLTDQELKHLILQAAEGFL--------------------QNHSEIE------ 311
TE +YKP FL+D ELKHLIL+AA+GFL N+S+ +
Sbjct: 133 TEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSL 192
Query: 312 ------------KRRRDKMNTYITELSAMVPTLLPVKTADIPAEVSRLCPGARRSFFCRM 359
K + +T E T LPVKT DI SRLC GARRSFFCRM
Sbjct: 193 FDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKT-DITPGPSRLCSGARRSFFCRM 251
Query: 360 KCKHTPASSSSSSSSNSAPSTQPGPNTPSPGTGSCVKEEPDTTTGAAASCHRKKKQQQSD 419
KC N PS VK E ++C +KK ++S
Sbjct: 252 KC-----------------------NRPS------VKVE---DKDFPSTCSKKKADRKS- 278
Query: 420 RKYSVIQCTGYLKSWAPAKMGLEESEDRKYSVIQCTGYLKSWAPAKMGLEESEGEGEGGE 479
+ I TGYLKSW P KMGL+ E++E + EG
Sbjct: 279 --FCTIHSTGYLKSWPPTKMGLD--------------------------EDNEPDNEG-- 308
Query: 480 TCTLSCLVAVGRVLADKT-RILNKQVNLRPIQFLSRHALDGKFLFV-------------- 524
C LSCLVA+GR+ + + +N ++ ++ ++++SRHA+DGKF+FV
Sbjct: 309 -CNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQE 367
Query: 525 ------------------------------------YQFKNKGGTYVQLQSEWKNFRNPW 548
Y+FK K G+++ L+S W +F NPW
Sbjct: 368 LLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNPW 427
Query: 549 TKDIEYLISKNTLIL 563
TK++EY++S NT++L
Sbjct: 428 TKEVEYIVSTNTVVL 442
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 40/51 (78%), Gaps = 5/51 (9%)
Query: 167 AQGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQVIVGLPV 217
+Q +L+GQS FD LHPKD+AKVKEQL SSD +PRERLID K+ GLPV
Sbjct: 183 SQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKT-----GLPV 228
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 39/56 (69%), Gaps = 6/56 (10%)
Query: 282 YKPAFLTDQELKHLILQAAE--GFLQN----HSEIEKRRRDKMNTYITELSAMVPT 331
Y+ + TD++ H L+ E G ++N HS+IEKRRRDKMN++I EL+++VPT
Sbjct: 46 YQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPT 101
>sp|Q9WTL8|BMAL1_MOUSE Aryl hydrocarbon receptor nuclear translocator-like protein 1
OS=Mus musculus GN=Arntl PE=1 SV=2
Length = 632
Score = 246 bits (627), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 162/436 (37%), Positives = 217/436 (49%), Gaps = 157/436 (36%)
Query: 218 SRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSY 277
+R+ HS+IEKRRRDKMN++I EL+++VP C+AMSRKLDKLTVLRMAVQH+KT+RGA + Y
Sbjct: 80 AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY 139
Query: 278 TEGHYKPAFLTDQELKHLILQAAEGFL--------------------QNHSEIE------ 311
TE +YKP FL+D ELKHLIL+AA+GFL N+S+ +
Sbjct: 140 TEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSL 199
Query: 312 ------------KRRRDKMNTYITELSAMVPTLLPVKTADIPAEVSRLCPGARRSFFCRM 359
K + +T E T LPVKT DI SRLC GARRSFFCRM
Sbjct: 200 FDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKT-DITPGPSRLCSGARRSFFCRM 258
Query: 360 KCKHTPASSSSSSSSNSAPSTQPGPNTPSPGTGSCVKEEPDTTTGAAASCHRKKKQQQSD 419
KC N PS VK E A++C +KK D
Sbjct: 259 KC-----------------------NRPS------VKVE---DKDFASTCSKKK-----D 281
Query: 420 RK-YSVIQCTGYLKSWAPAKMGLEESEDRKYSVIQCTGYLKSWAPAKMGLEESEGEGEGG 478
RK + I TGYLKSW P KMGL+ E++E + EG
Sbjct: 282 RKSFCTIHSTGYLKSWPPTKMGLD--------------------------EDNEPDNEG- 314
Query: 479 ETCTLSCLVAVGRVLADKT-RILNKQVNLRPIQFLSRHALDGKFLFV------------- 524
C LSCLVA+GR+ + + N ++ ++ ++++SRHA+DGKF+FV
Sbjct: 315 --CNLSCLVAIGRLHSHMVPQPANGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQ 372
Query: 525 -------------------------------------YQFKNKGGTYVQLQSEWKNFRNP 547
Y+FK K G+++ L+S W +F NP
Sbjct: 373 ELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNP 432
Query: 548 WTKDIEYLISKNTLIL 563
WTK++EY++S NT++L
Sbjct: 433 WTKEVEYIVSTNTVVL 448
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 40/51 (78%), Gaps = 5/51 (9%)
Query: 167 AQGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQVIVGLPV 217
+Q +L+GQS FD LHPKD+AKVKEQL SSD +PRERLID K+ GLPV
Sbjct: 190 SQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKT-----GLPV 235
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 37/50 (74%), Gaps = 6/50 (12%)
Query: 288 TDQELKHLILQAAE--GFLQN----HSEIEKRRRDKMNTYITELSAMVPT 331
TD++ H L+ AE G ++N HS+IEKRRRDKMN++I EL+++VPT
Sbjct: 59 TDKDDPHGRLEYAEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPT 108
>sp|Q9EPW1|BMAL1_RAT Aryl hydrocarbon receptor nuclear translocator-like protein 1
OS=Rattus norvegicus GN=Arntl PE=2 SV=4
Length = 626
Score = 246 bits (627), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 160/435 (36%), Positives = 217/435 (49%), Gaps = 154/435 (35%)
Query: 218 SRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSY 277
+R+ HS+IEKRRRDKMN++I EL+++VP C+AMSRKLDKLTVLRMAVQH+KT+RGA + Y
Sbjct: 73 AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY 132
Query: 278 TEGHYKPAFLTDQELKHLILQAAEGFL--------------------QNHSEIE------ 311
TE +YKP L+D ELKHLIL+AA+GFL N+S+ +
Sbjct: 133 TEANYKPTSLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSL 192
Query: 312 ------------KRRRDKMNTYITELSAMVPTLLPVKTADIPAEVSRLCPGARRSFFCRM 359
K + +T E T LPVKT DI SRLC GARRSFFCRM
Sbjct: 193 FDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKT-DITPGPSRLCSGARRSFFCRM 251
Query: 360 KCKHTPASSSSSSSSNSAPSTQPGPNTPSPGTGSCVKEEPDTTTGAAASCHRKKKQQQSD 419
KC N PS VK E A++C +KK ++S
Sbjct: 252 KC-----------------------NRPS------VKVE---DKDFASTCSKKKADRKS- 278
Query: 420 RKYSVIQCTGYLKSWAPAKMGLEESEDRKYSVIQCTGYLKSWAPAKMGLEESEGEGEGGE 479
+ I TGYLKSW P KMGL+ E+SE + EG
Sbjct: 279 --FCTIHSTGYLKSWPPTKMGLD--------------------------EDSEPDNEG-- 308
Query: 480 TCTLSCLVAVGRVLADKT-RILNKQVNLRPIQFLSRHALDGKFLFV-------------- 524
C LSCLVA+GR+ + + +N ++ ++ ++++SRHA+DGKF+FV
Sbjct: 309 -CNLSCLVAIGRLHSHMVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQE 367
Query: 525 ------------------------------------YQFKNKGGTYVQLQSEWKNFRNPW 548
Y+FK K G+++ L+S W +F NPW
Sbjct: 368 LLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNPW 427
Query: 549 TKDIEYLISKNTLIL 563
TK++EY++S NT++L
Sbjct: 428 TKEVEYIVSTNTVVL 442
Score = 68.9 bits (167), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 40/51 (78%), Gaps = 5/51 (9%)
Query: 167 AQGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQVIVGLPV 217
+Q +L+GQS FD LHPKD+AKVKEQL SSD +PRERLID K+ GLPV
Sbjct: 183 SQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKT-----GLPV 228
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 40/56 (71%), Gaps = 6/56 (10%)
Query: 282 YKPAFLTDQELKHLILQAAE--GFLQN----HSEIEKRRRDKMNTYITELSAMVPT 331
Y+ + TD++ H L+ AE G ++N HS+IEKRRRDKMN++I EL+++VPT
Sbjct: 46 YQESMDTDKDDPHGRLEYAEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPT 101
>sp|Q5R4T2|BMAL1_PONAB Aryl hydrocarbon receptor nuclear translocator-like protein 1
OS=Pongo abelii GN=ARNTL PE=2 SV=1
Length = 625
Score = 245 bits (625), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 161/436 (36%), Positives = 217/436 (49%), Gaps = 157/436 (36%)
Query: 218 SRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSY 277
+R+ HS+IEKRRRDKMN++I EL+++VP C+AMSRKLDKLTVLRMAVQH+KT+RGA + Y
Sbjct: 73 AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY 132
Query: 278 TEGHYKPAFLTDQELKHLILQAAEGFL--------------------QNHSEIE------ 311
TE +YKP FL+D ELKHLIL+AA+GFL N+S+ +
Sbjct: 133 TEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESAFKILNYSQNDLIGQSL 192
Query: 312 ------------KRRRDKMNTYITELSAMVPTLLPVKTADIPAEVSRLCPGARRSFFCRM 359
K + +T E T LPVKT DI SRLC GARRSFFCRM
Sbjct: 193 FDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKT-DITPGPSRLCSGARRSFFCRM 251
Query: 360 KCKHTPASSSSSSSSNSAPSTQPGPNTPSPGTGSCVKEEPDTTTGAAASCHRKKKQQQSD 419
KC N PS VK E ++C +KK D
Sbjct: 252 KC-----------------------NRPS------VKVE---DKDFPSTCSKKK-----D 274
Query: 420 RK-YSVIQCTGYLKSWAPAKMGLEESEDRKYSVIQCTGYLKSWAPAKMGLEESEGEGEGG 478
RK + I TGYLKSW P KMGL+ E++E + EG
Sbjct: 275 RKSFCTIHSTGYLKSWPPTKMGLD--------------------------EDNEPDNEG- 307
Query: 479 ETCTLSCLVAVGRVLADKT-RILNKQVNLRPIQFLSRHALDGKFLFV------------- 524
C LSCLVA+GR+ + + +N ++ ++ ++++SRHA+DGKF+FV
Sbjct: 308 --CNLSCLVAIGRLHSHVVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQRATAILAYLPQ 365
Query: 525 -------------------------------------YQFKNKGGTYVQLQSEWKNFRNP 547
Y+FK K G+++ L+S W +F NP
Sbjct: 366 ELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNP 425
Query: 548 WTKDIEYLISKNTLIL 563
WTK++EY++S NT++L
Sbjct: 426 WTKEVEYIVSTNTVVL 441
Score = 68.9 bits (167), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 40/51 (78%), Gaps = 5/51 (9%)
Query: 167 AQGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQVIVGLPV 217
+Q +L+GQS FD LHPKD+AKVKEQL SSD +PRERLID K+ GLPV
Sbjct: 183 SQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKT-----GLPV 228
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 39/56 (69%), Gaps = 6/56 (10%)
Query: 282 YKPAFLTDQELKHLILQAAE--GFLQN----HSEIEKRRRDKMNTYITELSAMVPT 331
Y+ + TD++ H L+ E G ++N HS+IEKRRRDKMN++I EL+++VPT
Sbjct: 46 YQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPT 101
>sp|Q91YA9|BMAL1_NANGA Aryl hydrocarbon receptor nuclear translocator-like protein 1
OS=Nannospalax galili GN=Arntl PE=1 SV=1
Length = 626
Score = 241 bits (616), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 158/435 (36%), Positives = 213/435 (48%), Gaps = 154/435 (35%)
Query: 218 SRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSY 277
+R+ HS+IEKRRRDKMN++I EL+++VP C+AMSRKLDKLTVLRMAVQH+KT+RGA + Y
Sbjct: 73 AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY 132
Query: 278 TEGHYKPAFLTDQELKHLILQAAEGFL--------------------QNHSEIE------ 311
TE +YKP FL+D ELKHLIL+AA+GFL N+S+ +
Sbjct: 133 TEANYKPTFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVFKILNYSQNDLIGQSL 192
Query: 312 ------------KRRRDKMNTYITELSAMVPTLLPVKTADIPAEVSRLCPGARRSFFCRM 359
K + +T E T LPVKT DI SRLC GARRSFFCRM
Sbjct: 193 FDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKT-DITPGPSRLCSGARRSFFCRM 251
Query: 360 KCKHTPASSSSSSSSNSAPSTQPGPNTPSPGTGSCVKEEPDTTTGAAASCHRKKKQQQSD 419
KC N PS VK E ++C +KK ++S
Sbjct: 252 KC-----------------------NRPS------VKVE---DKDFPSTCSKKKADRKS- 278
Query: 420 RKYSVIQCTGYLKSWAPAKMGLEESEDRKYSVIQCTGYLKSWAPAKMGLEESEGEGEGGE 479
+ I TGYLKSW P KMGL+ E++E + EG
Sbjct: 279 --FCTIHSTGYLKSWPPTKMGLD--------------------------EDNEADSEG-- 308
Query: 480 TCTLSCLVAVGRVLADKT-RILNKQVNLRPIQFLSRHALDGKFLFV-------------- 524
C LSCLVA+GR+ + + + ++ +++SRHA+DGKF+FV
Sbjct: 309 -CNLSCLVAIGRLHSHVVPQPAGGDIKVKSTEYVSRHAIDGKFVFVDQRATAILAYLPQE 367
Query: 525 ------------------------------------YQFKNKGGTYVQLQSEWKNFRNPW 548
Y+FK K G+++ L+S W +F NPW
Sbjct: 368 LLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSFITLRSRWFSFMNPW 427
Query: 549 TKDIEYLISKNTLIL 563
TK++EY++S NT++L
Sbjct: 428 TKEVEYIVSTNTVVL 442
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/51 (66%), Positives = 40/51 (78%), Gaps = 5/51 (9%)
Query: 167 AQGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQVIVGLPV 217
+Q +L+GQS FD LHPKD+AKVKEQL SSD +PRERLID K+ GLPV
Sbjct: 183 SQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKT-----GLPV 228
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 39/56 (69%), Gaps = 6/56 (10%)
Query: 282 YKPAFLTDQELKHLILQAAE--GFLQN----HSEIEKRRRDKMNTYITELSAMVPT 331
Y+ + TD++ H L+ E G ++N HS+IEKRRRDKMN++I EL+++VPT
Sbjct: 46 YQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPT 101
>sp|O61734|CYCL_DROME Protein cycle OS=Drosophila melanogaster GN=cyc PE=2 SV=2
Length = 413
Score = 239 bits (609), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 158/440 (35%), Positives = 215/440 (48%), Gaps = 153/440 (34%)
Query: 219 RQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIR--GAVHS 276
+QNHSEIEKRRRDKMNTYI ELS+M+PMC AM RKLDKLTVLRMAVQHL+ IR G++H
Sbjct: 32 KQNHSEIEKRRRDKMNTYINELSSMIPMCFAMQRKLDKLTVLRMAVQHLRGIRGSGSLHP 91
Query: 277 YTEGHYKPAFLTDQELKHLILQAAEGF----------------------------LQNHS 308
+ Y+P+FL+DQELK +ILQA+EGF L S
Sbjct: 92 FNGSDYRPSFLSDQELKMIILQASEGFLFVVGCDRGRILYVSDSVSSVLNSTQADLLGQS 151
Query: 309 EIEKRRRDKMNTYITELSAM----------VPTLLPVKTADIPAEVSRLCPGARRSFFCR 358
+ + +LS++ T+LPVKT D+P + RLCPGARRSFFCR
Sbjct: 152 WFDVLHPKDIGKVKEQLSSLEQCPRERLIDAKTMLPVKT-DVPQSLCRLCPGARRSFFCR 210
Query: 359 MKCKHTPASSSSSSSSNSAPSTQPGPNTPSPGTGSCVKEEPDTTTGAAASCHRKKKQQQS 418
MK + ++S+N +KEE DT++ + +S ++K + +
Sbjct: 211 MKLR--------TASNNQ------------------IKEESDTSSSSRSS-TKRKSRLTT 243
Query: 419 DRKYSVIQCTGYLKSWAPAKMGLEESEDRKYSVIQCTGYLKSWAPAKMGLEESEGEGEGG 478
KY VIQCTGYLKSW P K +E +
Sbjct: 244 GHKYRVIQCTGYLKSWTPIK------------------------------DEDQDADSDE 273
Query: 479 ETCTLSCLVAVGRVLADKTR-----ILNKQVNLRPIQFLSRHALDGKFLF---------- 523
+T LSCLVA+GR+ + L+ N+R + F+SRH+ +GKFLF
Sbjct: 274 QTTNLSCLVAIGRIPPNVRNSTVPASLDNHPNIRHVLFISRHSGEGKFLFIDQRATLVIG 333
Query: 524 ----------------------------------------VYQFKNKGGTYVQLQSEWKN 543
VY+F+ K +Y+QLQSEW+
Sbjct: 334 FLPQEILGTSFYEYFHNEDIAALMESHKMVMQVPEKVTTQVYRFRCKDNSYIQLQSEWRA 393
Query: 544 FRNPWTKDIEYLISKNTLIL 563
F+NPWT +I+Y+I+KN++ L
Sbjct: 394 FKNPWTSEIDYIIAKNSVFL 413
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 35/43 (81%)
Query: 166 SAQGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKS 208
S Q +LLGQSWFD+LHPKD+ KVKEQL S + PRERLID K+
Sbjct: 142 STQADLLGQSWFDVLHPKDIGKVKEQLSSLEQCPRERLIDAKT 184
>sp|Q8QGQ7|BMAL2_CHICK Aryl hydrocarbon receptor nuclear translocator-like protein 2
OS=Gallus gallus GN=ARNTL2 PE=1 SV=1
Length = 622
Score = 205 bits (521), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 136/433 (31%), Positives = 198/433 (45%), Gaps = 156/433 (36%)
Query: 219 RQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSYT 278
R+ HS+ EKRRRDKMN I ELSAM+P C+ M+RKLDKLTVLRMAVQHLK+++G+ SYT
Sbjct: 94 REAHSQTEKRRRDKMNNLIEELSAMIPQCNPMARKLDKLTVLRMAVQHLKSLKGSTSSYT 153
Query: 279 EGHYKPAFLTDQELKHLILQAAEGFL---------------------------------- 304
E YKP+FL D EL+ LIL+AA+GFL
Sbjct: 154 EVRYKPSFLKDDELRQLILRAADGFLFVVGCNRGKILFVSESVCKILNYDQTSLIGQSLF 213
Query: 305 --QNHSEIEKRRRDKMNTYITELSAMV--PTLLPVKTADIPAEVSRLCPGARRSFFCRMK 360
+ ++ K + ++ ++ +V T L V T D A +RL GARRSFFCR+K
Sbjct: 214 DYLHPKDVAKVKEQLSSSDVSPREKLVDGKTGLQVHT-DFQAGPARLNSGARRSFFCRIK 272
Query: 361 CKHTPASSSSSSSSNSAPSTQPGPNTPSPGTGSCVKEEPDTTTGAAASCHRKKKQQQSDR 420
C T VKEE + KKK R
Sbjct: 273 CSRT-----------------------------TVKEEKECLPNP------KKKDH---R 294
Query: 421 KYSVIQCTGYLKSWAPAKMGLEESEDRKYSVIQCTGYLKSWAPAKMGLEESEGEGEGGET 480
KY I CTGY+K+W P+++G+EE D + + +
Sbjct: 295 KYCTIHCTGYMKNWPPSEVGVEEENDVEKN-----------------------------S 325
Query: 481 CTLSCLVAVGRVLADKTRILNKQVNLRPIQFLSRHALDGKFLFV---------------- 524
+CLVA+GR+ + ++ ++ +F++R A+DGKF++V
Sbjct: 326 SNFNCLVAIGRLHPYIVPQKSGEIKVKATEFVTRFAMDGKFVYVDQRATAILGYLPQELL 385
Query: 525 ----------------------------------YQFKNKGGTYVQLQSEWKNFRNPWTK 550
Y+F+ K G+++ L+S+W +F NPWTK
Sbjct: 386 GTSCYEYCHQDDHNHLAEKHKEVLQNKEKVFTNSYKFRAKDGSFITLKSQWFSFMNPWTK 445
Query: 551 DIEYLISKNTLIL 563
++EY++S NT++L
Sbjct: 446 ELEYIVSNNTVVL 458
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/41 (73%), Positives = 35/41 (85%)
Query: 168 QGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKS 208
Q L+GQS FD LHPKDVAKVKEQL SSD+SPRE+L+D K+
Sbjct: 204 QTSLIGQSLFDYLHPKDVAKVKEQLSSSDVSPREKLVDGKT 244
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 24/33 (72%)
Query: 303 FLQNHSEIEKRRRDKMNTYITELSAMVPTLLPV 335
F + HS+ EKRRRDKMN I ELSAM+P P+
Sbjct: 93 FREAHSQTEKRRRDKMNNLIEELSAMIPQCNPM 125
>sp|Q8WYA1|BMAL2_HUMAN Aryl hydrocarbon receptor nuclear translocator-like protein 2
OS=Homo sapiens GN=ARNTL2 PE=1 SV=2
Length = 636
Score = 196 bits (499), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 134/439 (30%), Positives = 197/439 (44%), Gaps = 156/439 (35%)
Query: 213 VGLPVSRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRG 272
V + R+ HS+ EKRRRDKMN I ELSAM+P C+ M+RKLDKLTVLRMAVQHL++++G
Sbjct: 103 VKMKAFREAHSQTEKRRRDKMNNLIEELSAMIPQCNPMARKLDKLTVLRMAVQHLRSLKG 162
Query: 273 AVHSYTEGHYKPAFLTDQELKHLILQAAEGFL-------QNHSEIEKRRRDKMNTYITEL 325
+SY +Y+P+FL D EL+HLIL+ AEGFL + K +N L
Sbjct: 163 LTNSYVGSNYRPSFLQDNELRHLILKTAEGFLFVVGCERGKILFVSKSVSKILNYDQASL 222
Query: 326 S--AMVPTLLPVKTADIPAEVS----------------------------RLCPGARRSF 355
+ ++ L P A + ++S R+ G+RRSF
Sbjct: 223 TGQSLFDFLHPKDVAKVKEQLSSFDISPREKLIDAKTGLQVHSNLHAGRTRVYSGSRRSF 282
Query: 356 FCRMK-CKHTPASSSSSSSSNSAPSTQPGPNTPSPGTGSCVKEEPDTTTGAAASCHRKKK 414
FCR+K CK + VKEE + KKK
Sbjct: 283 FCRIKSCKIS------------------------------VKEEHGCLPNS------KKK 306
Query: 415 QQQSDRKYSVIQCTGYLKSWAPAKMGLEESEDRKYSVIQCTGYLKSWAPAKMGLEESEGE 474
+ RK+ I CTGYL+SW P +G+EE + K
Sbjct: 307 EH---RKFYTIHCTGYLRSWPPNIVGMEEERNSK-------------------------- 337
Query: 475 GEGGETCTLSCLVAVGRVLADKTRILNKQVNLRPIQFLSRHALDGKFLFV---------- 524
+ +CLVA+GR+ + ++N++P +F++R A++GKF++V
Sbjct: 338 ---KDNSNFTCLVAIGRLQPYIVPQNSGEINVKPTEFITRFAVNGKFVYVDQRATAILGY 394
Query: 525 ----------------------------------------YQFKNKGGTYVQLQSEWKNF 544
Y+F+ K G++V L+S+W +F
Sbjct: 395 LPQELLGTSCYEYFHQDDHNNLTDKHKAVLQSKEKILTDSYKFRAKDGSFVTLKSQWFSF 454
Query: 545 RNPWTKDIEYLISKNTLIL 563
NPWTK++EY++S NTL+L
Sbjct: 455 TNPWTKELEYIVSVNTLVL 473
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 38/56 (67%), Gaps = 5/56 (8%)
Query: 168 QGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQVIVGLPVSRQNHS 223
Q L GQS FD LHPKDVAKVKEQL S D+SPRE+LID K+ GL V H+
Sbjct: 219 QASLTGQSLFDFLHPKDVAKVKEQLSSFDISPREKLIDAKT-----GLQVHSNLHA 269
>sp|Q9BE97|ARNT_BOVIN Aryl hydrocarbon receptor nuclear translocator OS=Bos taurus
GN=ARNT PE=2 SV=1
Length = 790
Score = 184 bits (468), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 130/436 (29%), Positives = 195/436 (44%), Gaps = 150/436 (34%)
Query: 217 VSRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHS 276
++R+NHSEIE+RRR+KM YITELS MVP C A++RK DKLT+LRMAV H+K++RG ++
Sbjct: 89 LARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVSHMKSLRGTGNT 148
Query: 277 YTEGHYKPAFLTDQELKHLILQAAEGFL-------------------------------- 304
T+G YKP+FLTDQELKHLIL+AA+GFL
Sbjct: 149 STDGTYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEWFGST 208
Query: 305 ---QNHSEIEKRRRDKMNTYITELSAMVPTLLPVKTADIPAEVS----RLCPGARRSFFC 357
Q H + + R++++T L+ + L +KT + E R+C G+RRSF C
Sbjct: 209 LYDQVHPDDVDKLREQLSTSENALTGRI---LDLKTGTVKKEGQQSSMRMCMGSRRSFIC 265
Query: 358 RMKCKHTPASSSSSSSSNSAPSTQPGPNTPSPGTGSCVKEEPDTTTGAAASCHRKKKQQQ 417
RM+C + SS S S N + N G GS EP
Sbjct: 266 RMRCGN---SSVDSVSMNRLSFVR---NRCRNGLGSAKDGEP------------------ 301
Query: 418 SDRKYSVIQCTGYLKSWAPAKMGLEESEDRKYSVIQCTGYLKSWAPAKMGLEESEGEGEG 477
+ V+ CTGY+K+W PA + L + + G+G
Sbjct: 302 ---HFVVVHCTGYIKAWPPAGVSLPDDDPEA--------------------------GQG 332
Query: 478 GETCTLSCLVAVGRVLADKTRILNKQVNL-RPIQFLSRHALDGKFLFV------------ 524
+ CLVA+GR+ + N+ +P +F+SRH ++G F FV
Sbjct: 333 SKF----CLVAIGRLQVTSSPNCTDMSNVCQPTEFISRHNIEGIFTFVDHRCVATVGYQP 388
Query: 525 --------------------------------------YQFKNKGGTYVQLQSEWKNFRN 546
++F++K ++ +++ F+N
Sbjct: 389 QELLGKNIVEFCHPEDQQLLRDSFQQVVKLKGQVLSVMFRFRSKNREWLWVRTSSFTFQN 448
Query: 547 PWTKDIEYLISKNTLI 562
P++ +IEY+I NT +
Sbjct: 449 PYSDEIEYIICTNTNV 464
Score = 38.5 bits (88), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 29/44 (65%)
Query: 168 QGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQV 211
Q E G + +D +HP DV K++EQL +S+ + R++D+K+ V
Sbjct: 201 QSEWFGSTLYDQVHPDDVDKLREQLSTSENALTGRILDLKTGTV 244
>sp|P27540|ARNT_HUMAN Aryl hydrocarbon receptor nuclear translocator OS=Homo sapiens
GN=ARNT PE=1 SV=1
Length = 789
Score = 183 bits (464), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 129/436 (29%), Positives = 194/436 (44%), Gaps = 150/436 (34%)
Query: 217 VSRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHS 276
++R+NHSEIE+RRR+KM YITELS MVP C A++RK DKLT+LRMAV H+K++RG ++
Sbjct: 89 LARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVSHMKSLRGTGNT 148
Query: 277 YTEGHYKPAFLTDQELKHLILQAAEGFL-------------------------------- 304
T+G YKP+FLTDQELKHLIL+AA+GFL
Sbjct: 149 STDGSYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEWFGST 208
Query: 305 ---QNHSEIEKRRRDKMNTYITELSAMVPTLLPVKTADIPAEVS----RLCPGARRSFFC 357
Q H + + R++++T L+ + L +KT + E R+C G+RRSF C
Sbjct: 209 LYDQVHPDDVDKLREQLSTSENALTGRI---LDLKTGTVKKEGQQSSMRMCMGSRRSFIC 265
Query: 358 RMKCKHTPASSSSSSSSNSAPSTQPGPNTPSPGTGSCVKEEPDTTTGAAASCHRKKKQQQ 417
RM+C +SS S N + N G GS EP
Sbjct: 266 RMRCG---SSSVDPVSVNRLSFVR---NRCRNGLGSVKDGEP------------------ 301
Query: 418 SDRKYSVIQCTGYLKSWAPAKMGLEESEDRKYSVIQCTGYLKSWAPAKMGLEESEGEGEG 477
+ V+ CTGY+K+W PA + L + + G+G
Sbjct: 302 ---HFVVVHCTGYIKAWPPAGVSLPDDDPEA--------------------------GQG 332
Query: 478 GETCTLSCLVAVGRVLADKTRILNKQVNL-RPIQFLSRHALDGKFLFV------------ 524
+ CLVA+GR+ + N+ +P +F+SRH ++G F FV
Sbjct: 333 SKF----CLVAIGRLQVTSSPNCTDMSNVCQPTEFISRHNIEGIFTFVDHRCVATVGYQP 388
Query: 525 --------------------------------------YQFKNKGGTYVQLQSEWKNFRN 546
++F++K ++ +++ F+N
Sbjct: 389 QELLGKNIVEFCHPEDQQLLRDSFQQVVKLKGQVLSVMFRFRSKNQEWLWMRTSSFTFQN 448
Query: 547 PWTKDIEYLISKNTLI 562
P++ +IEY+I NT +
Sbjct: 449 PYSDEIEYIICTNTNV 464
Score = 38.5 bits (88), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 29/44 (65%)
Query: 168 QGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQV 211
Q E G + +D +HP DV K++EQL +S+ + R++D+K+ V
Sbjct: 201 QSEWFGSTLYDQVHPDDVDKLREQLSTSENALTGRILDLKTGTV 244
>sp|Q9DG12|ARNT2_DANRE Aryl hydrocarbon receptor nuclear translocator 2 OS=Danio rerio
GN=arnt2 PE=1 SV=2
Length = 737
Score = 183 bits (464), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 130/438 (29%), Positives = 191/438 (43%), Gaps = 156/438 (35%)
Query: 218 SRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSY 277
+R+NHSEIE+RRR+KM YITELS MVP C A++RK DKLT+LRMAV H+K++RG ++
Sbjct: 79 ARENHSEIERRRRNKMTQYITELSDMVPTCSALARKPDKLTILRMAVSHMKSMRGTGNTS 138
Query: 278 TEGHYKPAFLTDQELKHLILQAAEGFL--------------------QNHSE-------- 309
T+G YKP+FLT+QELKHLIL+AA+GFL NH +
Sbjct: 139 TDGAYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNHPQSEWFGSTL 198
Query: 310 IEKRRRDKMNTYITELS----AMVPTLLPVKTADIPAEVS----RLCPGARRSFFCRMKC 361
E+ D ++ +LS +M +L +KT + E R+C G+RRSF CRM+C
Sbjct: 199 FEQVHPDDVDKLREQLSTSENSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRSFICRMRC 258
Query: 362 KHTPASSSSSSSSNSAPSTQPGPNTPSPGTGSCVKEEPDTTTGAAASCHRKKKQ------ 415
P D + S RK+ +
Sbjct: 259 GSAPL---------------------------------DHISLNRLSSMRKRYRNGLGPS 285
Query: 416 QQSDRKYSVIQCTGYLKSWAPAKMGLEESEDRKYSVIQCTGYLKSWAPAKMGLEESEGEG 475
++ + +YSV+ CTGY+K+W PA M + + +
Sbjct: 286 KEGEAQYSVVHCTGYIKAWPPAGMTIPDEDT----------------------------- 316
Query: 476 EGGETCTLSCLVAVGRVLADKTRILNKQVNLR-PIQFLSRHALDGKFLFV---------- 524
E G+T CLVA+GR+ + + L P +FLSRH DG FV
Sbjct: 317 EAGQTSKY-CLVAIGRLQVTSSPVSMDMNGLSVPTEFLSRHNSDGIITFVDPRCINVIGY 375
Query: 525 ----------------------------------------YQFKNKGGTYVQLQSEWKNF 544
Y+F+ K ++ +++ F
Sbjct: 376 QPQDLLGKDILEFCHPEDQSHLRESFQQVVKLKGQVLSVMYRFRMKNREWMLIRTSSFTF 435
Query: 545 RNPWTKDIEYLISKNTLI 562
+NP++ +IEY+I NT +
Sbjct: 436 QNPYSDEIEYIICTNTNV 453
Score = 39.3 bits (90), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 168 QGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQV 211
Q E G + F+ +HP DV K++EQL +S+ S R++D+K+ V
Sbjct: 190 QSEWFGSTLFEQVHPDDVDKLREQLSTSENSMTGRILDLKTGTV 233
>sp|P53762|ARNT_MOUSE Aryl hydrocarbon receptor nuclear translocator OS=Mus musculus
GN=Arnt PE=1 SV=3
Length = 791
Score = 182 bits (463), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 130/436 (29%), Positives = 194/436 (44%), Gaps = 150/436 (34%)
Query: 217 VSRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHS 276
++R+NHSEIE+RRR+KM YITELS MVP C A++RK DKLT+LRMAV H+K++RG ++
Sbjct: 89 LARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVSHMKSLRGTGNT 148
Query: 277 YTEGHYKPAFLTDQELKHLILQAAEGFL-------------------------------- 304
T+G YKP+FLTDQELKHLIL+AA+GFL
Sbjct: 149 STDGSYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEWFGST 208
Query: 305 ---QNHSEIEKRRRDKMNTYITELSAMVPTLLPVKTADIPAEVS----RLCPGARRSFFC 357
Q H + + R++++T L+ V L +KT + E R+C G+RRSF C
Sbjct: 209 LYDQVHPDDVDKLREQLSTSENALTGRV---LDLKTGTVKKEGQQSSMRMCMGSRRSFIC 265
Query: 358 RMKCKHTPASSSSSSSSNSAPSTQPGPNTPSPGTGSCVKEEPDTTTGAAASCHRKKKQQQ 417
RM+C SS S N + N G GS + EP
Sbjct: 266 RMRCG---TSSVDPVSMNRLSFLR---NRCRNGLGSVKEGEP------------------ 301
Query: 418 SDRKYSVIQCTGYLKSWAPAKMGLEESEDRKYSVIQCTGYLKSWAPAKMGLEESEGEGEG 477
+ V+ CTGY+K+W PA + L + + G+G
Sbjct: 302 ---HFVVVHCTGYIKAWPPAGVSLPDDDPEA--------------------------GQG 332
Query: 478 GETCTLSCLVAVGRVLADKTRILNKQVNL-RPIQFLSRHALDGKFLFV------------ 524
+ CLVA+GR+ + N+ +P +F+SRH ++G F FV
Sbjct: 333 SKF----CLVAIGRLQVTSSPNCTDMSNICQPTEFISRHNIEGIFTFVDHRCVATVGYQP 388
Query: 525 --------------------------------------YQFKNKGGTYVQLQSEWKNFRN 546
++F++K ++ +++ F+N
Sbjct: 389 QELLGKNIVEFCHPEDQQLLRDSFQQVVKLKGQVLSVMFRFRSKTREWLWMRTSSFTFQN 448
Query: 547 PWTKDIEYLISKNTLI 562
P++ +IEY+I NT +
Sbjct: 449 PYSDEIEYIICTNTNV 464
Score = 38.1 bits (87), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 29/44 (65%)
Query: 168 QGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQV 211
Q E G + +D +HP DV K++EQL +S+ + R++D+K+ V
Sbjct: 201 QSEWFGSTLYDQVHPDDVDKLREQLSTSENALTGRVLDLKTGTV 244
>sp|O02748|ARNT_RABIT Aryl hydrocarbon receptor nuclear translocator OS=Oryctolagus
cuniculus GN=ARNT PE=2 SV=1
Length = 790
Score = 179 bits (455), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 128/436 (29%), Positives = 192/436 (44%), Gaps = 150/436 (34%)
Query: 217 VSRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHS 276
++R+NHSEIE+RRR+KM YITELS +VP C A++RK DKLT+LRMAV H+K++RG ++
Sbjct: 89 LARENHSEIERRRRNKMTAYITELSDIVPTCSALARKPDKLTILRMAVSHMKSLRGTGNT 148
Query: 277 YTEGHYKPAFLTDQELKHLILQAAEGFL-------------------------------- 304
T+G YKP+FLTDQELKHLIL+AA+GFL
Sbjct: 149 STDGSYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEWFGST 208
Query: 305 ---QNHSEIEKRRRDKMNTYITELSAMVPTLLPVKTADIPAEVS----RLCPGARRSFFC 357
Q H + + R++++T L+ + L +KT + E R+C G+RRSF C
Sbjct: 209 LYDQVHPDDVDKLREQLSTSENALTGRI---LDLKTGTVKKEGQQSSMRMCMGSRRSFIC 265
Query: 358 RMKCKHTPASSSSSSSSNSAPSTQPGPNTPSPGTGSCVKEEPDTTTGAAASCHRKKKQQQ 417
RM+C + SS S N + N G GS EP
Sbjct: 266 RMRCGN---SSVDPVSMNRLSFVR---NRCRNGLGSVKDGEP------------------ 301
Query: 418 SDRKYSVIQCTGYLKSWAPAKMGLEESEDRKYSVIQCTGYLKSWAPAKMGLEESEGEGEG 477
+ V+ CTGY+K+W PA + L + + E
Sbjct: 302 ---HFVVVHCTGYIKAWPPAGVSLPDDDP-----------------------------EA 329
Query: 478 GETCTLSCLVAVGRVLADKTRILNKQVNL-RPIQFLSRHALDGKFLFV------------ 524
G+ CLVA+GR+ + N+ +P +F+SRH ++G F FV
Sbjct: 330 GQGSKF-CLVAIGRLQVTSSPNCTDMSNVCQPTEFISRHNIEGIFTFVDHRCVATVGYQP 388
Query: 525 --------------------------------------YQFKNKGGTYVQLQSEWKNFRN 546
++F++K ++ ++ F+N
Sbjct: 389 QELLGKNIVEFCHPEDQQLLRDSFQQVVKLKGQVLSVMFRFRSKNREWLWTRTSSFTFQN 448
Query: 547 PWTKDIEYLISKNTLI 562
P++ +IEY+I NT +
Sbjct: 449 PYSDEIEYIICTNTNV 464
Score = 38.5 bits (88), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 29/44 (65%)
Query: 168 QGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQV 211
Q E G + +D +HP DV K++EQL +S+ + R++D+K+ V
Sbjct: 201 QSEWFGSTLYDQVHPDDVDKLREQLSTSENALTGRILDLKTGTV 244
>sp|Q9HBZ2|ARNT2_HUMAN Aryl hydrocarbon receptor nuclear translocator 2 OS=Homo sapiens
GN=ARNT2 PE=1 SV=2
Length = 717
Score = 178 bits (452), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 127/441 (28%), Positives = 190/441 (43%), Gaps = 162/441 (36%)
Query: 218 SRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSY 277
SR+NHSEIE+RRR+KM YITELS MVP C A++RK DKLT+LRMAV H+K++RG +
Sbjct: 64 SRENHSEIERRRRNKMTQYITELSDMVPTCSALARKPDKLTILRMAVSHMKSMRGTGNKS 123
Query: 278 TEGHYKPAFLTDQELKHLILQAAEGFL--------------------------------- 304
T+G YKP+FLT+QELKHLIL+AA+GFL
Sbjct: 124 TDGAYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWFGSTL 183
Query: 305 --QNHSEIEKRRRDKMNTYITELSAMVPTLLPVKTADIPAEVS----RLCPGARRSFFCR 358
Q H + ++ R+++ T ++M +L +KT + E R+C G+RRSF CR
Sbjct: 184 YEQVHPDDVEKLREQL---CTSENSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRSFICR 240
Query: 359 MKCKHTPASSSSSSSSNSAPSTQPGPNTPSPGTGSCVKEEPDTTTGAAASCHRKKKQ--- 415
M+C + P D + RK+ +
Sbjct: 241 MRCGNAPL---------------------------------DHLPLNRITTMRKRFRNGL 267
Query: 416 ---QQSDRKYSVIQCTGYLKSWAPAKMGLEESEDRKYSVIQCTGYLKSWAPAKMGLEESE 472
++ + +Y+V+ CTGY+K+W PA M + EE
Sbjct: 268 GPVKEGEAQYAVVHCTGYIKAWPPAGMTIP--------------------------EEDA 301
Query: 473 GEGEGGETCTLSCLVAVGRVLADKTRILNKQVNLR-PIQFLSRHALDGKFLFV------- 524
G+G + CLVA+GR+ + + + P +FLSRH DG FV
Sbjct: 302 DVGQGSKY----CLVAIGRLQVTSSPVCMDMNGMSVPTEFLSRHNSDGIITFVDPRCISV 357
Query: 525 -------------------------------------------YQFKNKGGTYVQLQSEW 541
Y+F+ K ++ +++
Sbjct: 358 IGYQPQDLLGKDILEFCHPEDQSHLRESFQQVVKLKGQVLSVMYRFRTKNREWMLIRTSS 417
Query: 542 KNFRNPWTKDIEYLISKNTLI 562
F+NP++ +IEY+I NT +
Sbjct: 418 FTFQNPYSDEIEYIICTNTNV 438
Score = 38.1 bits (87), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 29/44 (65%)
Query: 168 QGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQV 211
Q E G + ++ +HP DV K++EQL +S+ S R++D+K+ V
Sbjct: 175 QSEWFGSTLYEQVHPDDVEKLREQLCTSENSMTGRILDLKTGTV 218
>sp|Q78E60|ARNT2_RAT Aryl hydrocarbon receptor nuclear translocator 2 OS=Rattus
norvegicus GN=Arnt2 PE=2 SV=1
Length = 712
Score = 178 bits (451), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 127/435 (29%), Positives = 190/435 (43%), Gaps = 150/435 (34%)
Query: 218 SRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSY 277
SR+NHSEIE+RRR+KM YITELS MVP C A++RK DKLT+LRMAV H+K++RG +
Sbjct: 64 SRENHSEIERRRRNKMTQYITELSDMVPTCSALARKPDKLTILRMAVSHMKSMRGTGNKS 123
Query: 278 TEGHYKPAFLTDQELKHLILQAAEGFL--------------------------------- 304
T+G YKP+FLT+QELKHLIL+AA+GFL
Sbjct: 124 TDGAYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWFGSTL 183
Query: 305 --QNHSEIEKRRRDKMNTYITELSAMVPTLLPVKTADIPAEVS----RLCPGARRSFFCR 358
Q H + ++ R+++ T ++M +L +KT + E R+C G+RRSF CR
Sbjct: 184 YEQVHPDDVEKLREQL---CTSENSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRSFICR 240
Query: 359 MKCKHTPASSSSSSSSNSAPSTQPGPNTPSPGTGSCVKEEPDTTTGAAASCHRKKKQQQS 418
M+C + P + P + TT + ++
Sbjct: 241 MRCGNAPL--------DHLPLNR-------------------ITTMRKRFRNGLGPVKEG 273
Query: 419 DRKYSVIQCTGYLKSWAPAKMGLEESEDRKYSVIQCTGYLKSWAPAKMGLEESEGEGEGG 478
+ +Y+V+ CTGY+K+W PA M + EE G+G
Sbjct: 274 EAQYAVVHCTGYIKAWPPAGMSIP--------------------------EEDADVGQGS 307
Query: 479 ETCTLSCLVAVGRVLADKTRILNKQVNLR-PIQFLSRHALDGKFLFV------------- 524
+ CLVA+GR+ + + + P +FLSRH DG FV
Sbjct: 308 KY----CLVAIGRLQVTSSPVCMDMSGMSVPTEFLSRHNSDGIITFVDPRCISVIGYQPQ 363
Query: 525 -------------------------------------YQFKNKGGTYVQLQSEWKNFRNP 547
Y+F+ K ++ +++ F+NP
Sbjct: 364 DLLGKDILEFCHPEDQSHLRESFQQVVKLKGQVLSVMYRFRTKNREWLLIRTSSFTFQNP 423
Query: 548 WTKDIEYLISKNTLI 562
++ +IEY+I NT +
Sbjct: 424 YSDEIEYVICTNTNV 438
Score = 37.7 bits (86), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 29/44 (65%)
Query: 168 QGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQV 211
Q E G + ++ +HP DV K++EQL +S+ S R++D+K+ V
Sbjct: 175 QSEWFGSTLYEQVHPDDVEKLREQLCTSENSMTGRILDLKTGTV 218
>sp|P41739|ARNT_RAT Aryl hydrocarbon receptor nuclear translocator OS=Rattus norvegicus
GN=Arnt PE=1 SV=2
Length = 800
Score = 177 bits (450), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 118/348 (33%), Positives = 168/348 (48%), Gaps = 100/348 (28%)
Query: 217 VSRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHS 276
++R+NHSEIE+RRR+KM YITELS MVP C A++RK DKLT+LRMAV H+K++RG ++
Sbjct: 89 LARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVSHMKSLRGTGNT 148
Query: 277 YTEGHYKPAFLTDQELKHLILQAAEGFL-------------------------------- 304
T+G YKP+FLTDQELKHLIL+AA+GFL
Sbjct: 149 STDGSYKPSFLTDQELKHLILEAADGFLFIVSCETGRVVYVSDSVTPVLNQPQSEWFGST 208
Query: 305 ---QNHSEIEKRRRDKMNTYITELSAMVPTLLPVKTADIPAEVS----RLCPGARRSFFC 357
Q H + + R++++T L+ + L +KT + E R+C G+RRSF C
Sbjct: 209 LYDQVHPDDVDKLREQLSTSENALTGRI---LDLKTGTVKKEGQQSSMRMCMGSRRSFIC 265
Query: 358 RMKCKHTPASSSSSSSSNSAPSTQPGPNTPSPGTGSCVKEEPDTTTGAAASCHRKKKQQQ 417
RM+C SS S N + N G GS + EP
Sbjct: 266 RMRCG---TSSVDPVSMNRLSFLR---NRCRNGLGSVKEGEP------------------ 301
Query: 418 SDRKYSVIQCTGYLKSWAPAKMGLEESEDRKYSVIQCTGYLKSWAPAKMGLEESEGEGEG 477
+ V+ CTGY+K+W PA + L + + G+G
Sbjct: 302 ---HFVVVHCTGYIKAWPPAGVSLPDDDPEA--------------------------GQG 332
Query: 478 GETCTLSCLVAVGRVLADKTRILNKQVNL-RPIQFLSRHALDGKFLFV 524
+ CLVA+GR+ + N+ +P +F+SRH ++G F FV
Sbjct: 333 SKF----CLVAIGRLQVTSSPNCTDMSNICQPTEFISRHNIEGIFTFV 376
Score = 38.5 bits (88), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 29/44 (65%)
Query: 168 QGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQV 211
Q E G + +D +HP DV K++EQL +S+ + R++D+K+ V
Sbjct: 201 QSEWFGSTLYDQVHPDDVDKLREQLSTSENALTGRILDLKTGTV 244
>sp|Q61324|ARNT2_MOUSE Aryl hydrocarbon receptor nuclear translocator 2 OS=Mus musculus
GN=Arnt2 PE=1 SV=2
Length = 712
Score = 177 bits (449), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 127/435 (29%), Positives = 190/435 (43%), Gaps = 150/435 (34%)
Query: 218 SRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSY 277
SR+NHSEIE+RRR+KM YITELS MVP C A++RK DKLT+LRMAV H+K++RG +
Sbjct: 64 SRENHSEIERRRRNKMTQYITELSDMVPTCSALARKPDKLTILRMAVSHMKSMRGTGNKS 123
Query: 278 TEGHYKPAFLTDQELKHLILQAAEGFL--------------------------------- 304
T+G YKP+FLT+QELKHLIL+AA+GFL
Sbjct: 124 TDGAYKPSFLTEQELKHLILEAADGFLFVVAAETGRVIYVSDSVTPVLNQPQSEWFGSTL 183
Query: 305 --QNHSEIEKRRRDKMNTYITELSAMVPTLLPVKTADIPAEVS----RLCPGARRSFFCR 358
Q H + ++ R+++ T ++M +L +KT + E R+C G+RRSF CR
Sbjct: 184 YEQVHPDDVEKLREQL---CTSENSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRSFICR 240
Query: 359 MKCKHTPASSSSSSSSNSAPSTQPGPNTPSPGTGSCVKEEPDTTTGAAASCHRKKKQQQS 418
M+C + P + P + TT + ++
Sbjct: 241 MRCGNAPL--------DHLPLNR-------------------ITTMRKRFRNGLGPVKEG 273
Query: 419 DRKYSVIQCTGYLKSWAPAKMGLEESEDRKYSVIQCTGYLKSWAPAKMGLEESEGEGEGG 478
+ +Y+V+ CTGY+K+W PA M + EE G+G
Sbjct: 274 EAQYAVVHCTGYIKAWPPAGMTIP--------------------------EEDADVGQGS 307
Query: 479 ETCTLSCLVAVGRVLADKTRILNKQVNLR-PIQFLSRHALDGKFLFV------------- 524
+ CLVA+GR+ + + + P +FLSRH DG FV
Sbjct: 308 KY----CLVAIGRLQVTSSPVCMDMSGMSVPTEFLSRHNSDGIITFVDPRCISVIGYQPQ 363
Query: 525 -------------------------------------YQFKNKGGTYVQLQSEWKNFRNP 547
Y+F+ K ++ +++ F+NP
Sbjct: 364 DLLGKDILEFCHPEDQSHLRESFQQVVKLKGQVLSVMYRFRTKNREWLLIRTSSFTFQNP 423
Query: 548 WTKDIEYLISKNTLI 562
++ +IEY+I NT +
Sbjct: 424 YSDEIEYVICTNTNV 438
Score = 37.7 bits (86), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 29/44 (65%)
Query: 168 QGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQV 211
Q E G + ++ +HP DV K++EQL +S+ S R++D+K+ V
Sbjct: 175 QSEWFGSTLYEQVHPDDVEKLREQLCTSENSMTGRILDLKTGTV 218
>sp|Q2VPD4|BMAL2_MOUSE Aryl hydrocarbon receptor nuclear translocator-like protein 2
OS=Mus musculus GN=Arntl2 PE=2 SV=2
Length = 579
Score = 171 bits (434), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 126/432 (29%), Positives = 186/432 (43%), Gaps = 156/432 (36%)
Query: 219 RQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSYT 278
R+ HS++EKRRRDKMN I +LS+M+P + KLDKL+VLR AVQ+L+++RG Y
Sbjct: 50 REAHSQMEKRRRDKMNHLIQKLSSMIPPHIPTAHKLDKLSVLRRAVQYLRSLRGMTELYL 109
Query: 279 EGHYKPAFLTDQELKHLILQAAEGFL-----------QNHSEIEKRRRDKMNTYITELSA 327
+ KP+F+ D+EL HLIL+AAEGFL + K R + I +
Sbjct: 110 GENSKPSFIQDKELSHLILKAAEGFLFVVGCERGRIFYVSKSVSKTLRYDQASLIGQ--N 167
Query: 328 MVPTLLPVKTADIPAEVS--------------------------RLCPGARRSFFCRMKC 361
+ L P A + ++S R+ G+RRSFF RMK
Sbjct: 168 LFDFLHPKDVAKVKEQLSCDGSPREKPIDTKTSQVYSHPYTGRPRMHSGSRRSFFFRMKS 227
Query: 362 KHTPASSSSSSSSNSAPSTQPGPNTPSPGTGSCVKEEPDTTTGAAASCHRKKKQQQSDRK 421
P VKEE +SC +KK RK
Sbjct: 228 CTVP-----------------------------VKEE-----QPCSSCSKKKDH----RK 249
Query: 422 YSVIQCTGYLKSWAPAKMGLEESEDRKYSVIQCTGYLKSWAPAKMGLEESEGEGEGGETC 481
+ + CTGYL+SW +G+E+ G G ++
Sbjct: 250 FHTVHCTGYLRSWPLNVVGMEKE-----------------------------SGGGKDSG 280
Query: 482 TLSCLVAVGRVLADKTRILNKQVNLRPIQFLSRHALDGKFLFV----------------- 524
L+CLVA+GR+ + ++N+RP +F++R A++GKF++V
Sbjct: 281 PLTCLVAMGRLHPYIVPQKSGKINVRPAEFITRFAMNGKFVYVDQRATAILGYLPQELLG 340
Query: 525 ---------------------------------YQFKNKGGTYVQLQSEWKNFRNPWTKD 551
Y+F+ K G +V L+SEW +F NPWTK+
Sbjct: 341 TSCYEYFHQDDHSSLTDKHKAVLQSKEKILTDSYKFRVKDGAFVTLKSEWFSFTNPWTKE 400
Query: 552 IEYLISKNTLIL 563
+EY++S NTL+L
Sbjct: 401 LEYIVSVNTLVL 412
Score = 59.3 bits (142), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/44 (68%), Positives = 34/44 (77%), Gaps = 1/44 (2%)
Query: 168 QGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQV 211
Q L+GQ+ FD LHPKDVAKVKEQL S D SPRE+ ID K+ QV
Sbjct: 160 QASLIGQNLFDFLHPKDVAKVKEQL-SCDGSPREKPIDTKTSQV 202
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 27/38 (71%)
Query: 297 LQAAEGFLQNHSEIEKRRRDKMNTYITELSAMVPTLLP 334
+ A G + HS++EKRRRDKMN I +LS+M+P +P
Sbjct: 43 VSAPSGIREAHSQMEKRRRDKMNHLIQKLSSMIPPHIP 80
>sp|P79832|ARNT_ONCMY Aryl hydrocarbon receptor nuclear translocator OS=Oncorhynchus
mykiss GN=arnt PE=1 SV=1
Length = 723
Score = 169 bits (429), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 126/435 (28%), Positives = 185/435 (42%), Gaps = 150/435 (34%)
Query: 218 SRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSY 277
+R+NHSEIE+RRR+KM YITELS MVP C A++RK DKLT+LRMAV H+K++RG+ ++
Sbjct: 66 ARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVSHMKSLRGSGNTA 125
Query: 278 TEGHYKPAFLTDQELKHLILQAAEGFL--------------------------------- 304
+G YKP+FLTDQELKHLIL+AA+GFL
Sbjct: 126 ADGTYKPSFLTDQELKHLILEAADGFLFVVSCESGRVVYVSDSLTPVLNQSQSDWLGSSL 185
Query: 305 --QNHSEIEKRRRDKMNTYITELSAMVPTLLPVKTADIPAEVS----RLCPGARRSFFCR 358
Q H + + R++++T + + +L +KT + E R+C GARRSF CR
Sbjct: 186 YDQLHPDDGDKLREQLSTAESNNTG---RMLDLKTGTVKKEGQQSSVRMCMGARRSFICR 242
Query: 359 MKCKHTPASSSSSSSSNSAPSTQPGPNTPSPGTGSCVKEEPDTTTGAAASCHRKKKQQQS 418
M+C P S + N S G G EP
Sbjct: 243 MRCGSCPVEPMSMNRLNFLRSRNRN------GLGPPKDGEP------------------- 277
Query: 419 DRKYSVIQCTGYLKSWAPAKMGLEESEDRKYSVIQCTGYLKSWAPAKMGLEESEGEGEGG 478
+Y V+ CTGY+KSW P + L + E I + Y
Sbjct: 278 --QYVVVHCTGYIKSWPPTGVNLTDEEADN---ILGSRY--------------------- 311
Query: 479 ETCTLSCLVAVGRVLADKTRILNKQVNLR-PIQFLSRHALDGKFLFV------------- 524
CLVA+GR+ ++ P++F+SRH G F FV
Sbjct: 312 ------CLVAIGRLQVTSCPSDTDMNSISVPVEFISRHNCQGLFTFVDHRCMATVGYQPQ 365
Query: 525 -------------------------------------YQFKNKGGTYVQLQSEWKNFRNP 547
++F +K ++ +++ F+NP
Sbjct: 366 ELLGKNILELAHPEDQELLRDSFQQVVKLKGQVLSVMFRFLSKTRDWLWIRTSSFTFQNP 425
Query: 548 WTKDIEYLISKNTLI 562
++++IEY+I N +
Sbjct: 426 FSEEIEYIICTNANV 440
Score = 37.4 bits (85), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 30/45 (66%)
Query: 167 AQGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQV 211
+Q + LG S +D LHP D K++EQL +++ + R++D+K+ V
Sbjct: 176 SQSDWLGSSLYDQLHPDDGDKLREQLSTAESNNTGRMLDLKTGTV 220
>sp|O15945|ARNT_DROME Aryl hydrocarbon receptor nuclear translocator homolog
OS=Drosophila melanogaster GN=tgo PE=1 SV=3
Length = 642
Score = 165 bits (418), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 123/431 (28%), Positives = 180/431 (41%), Gaps = 146/431 (33%)
Query: 217 VSRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHS 276
SR+NH EIE+RRR+KM YITELS MVP C A++RK DKLT+LRMAV H+K +RG ++
Sbjct: 13 ASRENHCEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVAHMKALRGTGNT 72
Query: 277 YTEGHYKPAFLTDQELKHLILQAAEGFL--------------------QNHSE------- 309
++G YKP+FLTDQELKHLIL+AA+GFL N+++
Sbjct: 73 SSDGTYKPSFLTDQELKHLILEAADGFLFVVSCDSGRVIYVSDSVTPVLNYTQSDWYGTS 132
Query: 310 ----IEKRRRDKMNTYI-TELSAMVPTLLPVKTADIPAE----VSRLCPGARRSFFCRMK 360
I R+K+ + T+ S +L +K+ + E RL GARR F CRM+
Sbjct: 133 LYEHIHPDDREKIREQLSTQESQNAGRILDLKSGTVKKEGHQSSMRLSMGARRGFICRMR 192
Query: 361 CKHT-PASSSSSSSSNSAPSTQPGPNTPSPGTGSCVKEEPDTTTGAAASCHRKKKQQQSD 419
+ P S S + GP+ +
Sbjct: 193 VGNVNPESMVSGHLNRLKQRNSLGPS-------------------------------RDG 221
Query: 420 RKYSVIQCTGYLKSWAPAKMGLEESEDRKYSVIQCTGYLKSWAPAKMGLEESEGEGEGGE 479
Y+V+ CTGY+K+W P M E + +
Sbjct: 222 TNYAVVHCTGYIKNWPPTDM----------------------------FPNMHMERDVDD 253
Query: 480 TCTLSCLVAVGRVLADKTRILNKQVNLRPIQFLSRHALDGKFLFV--------------- 524
+ CLVA+GR+ T + + +F++RHA+DGKF FV
Sbjct: 254 MSSHCCLVAIGRLQVTSTAANDMSGSNNQSEFITRHAMDGKFTFVDQRVLNILGYTPTEL 313
Query: 525 -----------------------------------YQFKNKGGTYVQLQSEWKNFRNPWT 549
Y+ + K YV L+++ F NP+T
Sbjct: 314 LGKICYDFFHPEDQSHMKESFDQVLKQKGQMFSLLYRARAKNSEYVWLRTQAYAFLNPYT 373
Query: 550 KDIEYLISKNT 560
++EY++ N+
Sbjct: 374 DEVEYIVCTNS 384
Score = 33.5 bits (75), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 26/44 (59%)
Query: 168 QGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQV 211
Q + G S ++ +HP D K++EQL + + R++D+KS V
Sbjct: 125 QSDWYGTSLYEHIHPDDREKIREQLSTQESQNAGRILDLKSGTV 168
>sp|O02219|AHA1_CAEEL Aryl hydrocarbon receptor nuclear translocator homolog
OS=Caenorhabditis elegans GN=aha-1 PE=1 SV=1
Length = 453
Score = 124 bits (310), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/256 (33%), Positives = 117/256 (45%), Gaps = 80/256 (31%)
Query: 218 SRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSY 277
+R+NHSEIE+RRR+KM YI EL+ MVP C ++ RK DKLT+LRMAV H+K IRG +
Sbjct: 45 ARENHSEIERRRRNKMTHYINELAEMVPQCASLGRKPDKLTILRMAVSHMKGIRGHT-AQ 103
Query: 278 TEGHYKPAFLTDQELKHLILQAAEGFL------------------------------QNH 307
E YKP+FLTDQELKHLIL+AA GFL +N
Sbjct: 104 DETSYKPSFLTDQELKHLILEAANGFLFVVCCQTGKVLYVADSITPVLNLKQEDWLQRNL 163
Query: 308 SE-IEKRRRDKMNTYITELSAMVPTLLPVKTADIPAE--VSRLCPGARRSFFCRMKCKHT 364
+E I +DK+ + V +L +K+ + E +R+ RR F CRM+
Sbjct: 164 NELIHPDDQDKIRDQLCGSEVSVNKVLDLKSGSVKREGASTRVHMSCRRGFICRMR---- 219
Query: 365 PASSSSSSSSNSAPSTQPGPNTPSPGTGSCVKEEPDTTTGAAASCHRKKKQ----QQSDR 420
GA HR + + Q + +
Sbjct: 220 --------------------------------------VGALEPLHRLRNRRPLFQHAGQ 241
Query: 421 KYSVIQCTGYLKSWAP 436
Y V+ CTGY+K+ P
Sbjct: 242 NYVVMHCTGYIKNAPP 257
>sp|O61735|CLOCK_DROME Circadian locomoter output cycles protein kaput OS=Drosophila
melanogaster GN=Clk PE=2 SV=3
Length = 1027
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 58/97 (59%), Gaps = 9/97 (9%)
Query: 219 RQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLK-----TIRGA 273
R++ + EK+RRD+ N+ + +LSA++ SRK+DK TVL+ + LK T R
Sbjct: 17 RKSRNLSEKKRRDQFNSLVNDLSALISTS---SRKMDKSTVLKSTIAFLKNHNEATDRSK 73
Query: 274 VHSYTEGHYKPAFLTDQELKHLILQAAEGFLQNHSEI 310
V + +KPAFL++ E HL+L++ +GF+ S +
Sbjct: 74 VFEIQQ-DWKPAFLSNDEYTHLMLESLDGFMMVFSSM 109
>sp|Q99743|NPAS2_HUMAN Neuronal PAS domain-containing protein 2 OS=Homo sapiens GN=NPAS2
PE=2 SV=3
Length = 824
Score = 59.3 bits (142), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 55/91 (60%), Gaps = 9/91 (9%)
Query: 219 RQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSYT 278
R + ++ EK+RRD+ N I ELS+M+P +RK+DK TVL + L+ V + T
Sbjct: 11 RASRNKSEKKRRDQFNVLIKELSSMLP---GNTRKMDKTTVLEKVIGFLQK-HNEVSAQT 66
Query: 279 E-----GHYKPAFLTDQELKHLILQAAEGFL 304
E +KP+FL+++E L+L+A +GF+
Sbjct: 67 EICDIQQDWKPSFLSNEEFTQLMLEALDGFI 97
>sp|Q5ZQU2|NPAS2_CHICK Neuronal PAS domain-containing protein 2 OS=Gallus gallus GN=NPAS2
PE=2 SV=1
Length = 815
Score = 59.3 bits (142), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 55/91 (60%), Gaps = 9/91 (9%)
Query: 219 RQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSYT 278
R + ++ EK+RRD+ N I ELS+M+P +RK+DK TVL + L+ V + T
Sbjct: 11 RASRNKSEKKRRDQFNVLIKELSSMLP---GNTRKMDKTTVLEKVIGFLQK-HNEVSAQT 66
Query: 279 E-----GHYKPAFLTDQELKHLILQAAEGFL 304
E +KP+FL+++E L+L+A +GF+
Sbjct: 67 EISEIQQDWKPSFLSNEEFTQLMLEALDGFI 97
>sp|P97460|NPAS2_MOUSE Neuronal PAS domain-containing protein 2 OS=Mus musculus GN=Npas2
PE=1 SV=1
Length = 816
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 55/91 (60%), Gaps = 9/91 (9%)
Query: 219 RQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSYT 278
R + ++ EK+RRD+ N I ELS+M+P +RK+DK TVL + L+ V + T
Sbjct: 11 RASRNKSEKKRRDQFNVLIKELSSMLP---GNTRKMDKTTVLEKVIGFLQK-HNEVSAQT 66
Query: 279 E-----GHYKPAFLTDQELKHLILQAAEGFL 304
E +KP+FL+++E L+L+A +GF+
Sbjct: 67 EICDIQQDWKPSFLSNEEFTQLMLEALDGFV 97
>sp|O08785|CLOCK_MOUSE Circadian locomoter output cycles protein kaput OS=Mus musculus
GN=Clock PE=1 SV=1
Length = 855
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 54/90 (60%), Gaps = 7/90 (7%)
Query: 219 RQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAV----QHLKTIRGAV 274
R + ++ EK+RRD+ N I EL +M+P +RK+DK TVL+ ++ +H +T +
Sbjct: 36 RVSRNKSEKKRRDQFNVLIKELGSMLP---GNARKMDKSTVLQKSIDFLRKHKETTAQSD 92
Query: 275 HSYTEGHYKPAFLTDQELKHLILQAAEGFL 304
S +KP FL+++E L+L+A +GF
Sbjct: 93 ASEIRQDWKPTFLSNEEFTQLMLEALDGFF 122
>sp|O15516|CLOCK_HUMAN Circadian locomoter output cycles protein kaput OS=Homo sapiens
GN=CLOCK PE=1 SV=1
Length = 846
Score = 56.6 bits (135), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 62/124 (50%), Gaps = 14/124 (11%)
Query: 192 LFSSDLSPRERLIDVKSKQVIVGL-------PVSRQNHSEIEKRRRDKMNTYITELSAMV 244
LF+ S ++D + GL R + ++ EK+RRD+ N I EL +M+
Sbjct: 2 LFTVSCSKMSSIVDRDDSSIFDGLVEEDDKDKAKRVSRNKSEKKRRDQFNVLIKELGSML 61
Query: 245 PMCHAMSRKLDKLTVLRMAVQHLKTIRGAV----HSYTEGHYKPAFLTDQELKHLILQAA 300
P +RK+DK TVL+ ++ L+ + S +KP FL+++E L+L+A
Sbjct: 62 P---GNARKMDKSTVLQKSIDFLRKHKEITAQSDASEIRQDWKPTFLSNEEFTQLMLEAL 118
Query: 301 EGFL 304
+GF
Sbjct: 119 DGFF 122
>sp|Q5RAK8|CLOCK_PONAB Circadian locomoter output cycles protein kaput OS=Pongo abelii
GN=CLOCK PE=2 SV=1
Length = 846
Score = 56.2 bits (134), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 62/124 (50%), Gaps = 14/124 (11%)
Query: 192 LFSSDLSPRERLIDVKSKQVIVGL-------PVSRQNHSEIEKRRRDKMNTYITELSAMV 244
LF+ S ++D + GL R + ++ EK+RRD+ N I EL +M+
Sbjct: 2 LFTVSCSKMSSIVDRDDSSIFDGLVEEDDKDKAKRVSRNKSEKKRRDQFNVLIKELGSML 61
Query: 245 PMCHAMSRKLDKLTVLRMAVQHLKTIRGAV----HSYTEGHYKPAFLTDQELKHLILQAA 300
P +RK+DK TVL+ ++ L+ + S +KP FL+++E L+L+A
Sbjct: 62 P---GNARKMDKSTVLQKSIDFLRKHKEITAQSDASEIRQDWKPTFLSNEEFTQLMLEAL 118
Query: 301 EGFL 304
+GF
Sbjct: 119 DGFF 122
>sp|Q9WVS9|CLOCK_RAT Circadian locomoter output cycles protein kaput OS=Rattus
norvegicus GN=Clock PE=2 SV=1
Length = 862
Score = 56.2 bits (134), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 62/124 (50%), Gaps = 14/124 (11%)
Query: 192 LFSSDLSPRERLIDVKSKQVIVGL-------PVSRQNHSEIEKRRRDKMNTYITELSAMV 244
LF+ S ++D + GL R + ++ EK+RRD+ N I EL +M+
Sbjct: 2 LFTVSCSKMSSIVDRDDSSIFDGLVEEDDKDKAKRVSRNKSEKKRRDQFNVLIKELGSML 61
Query: 245 PMCHAMSRKLDKLTVLRMAVQHLKTIRGAV----HSYTEGHYKPAFLTDQELKHLILQAA 300
P +RK+DK TVL+ ++ L+ + S +KP FL+++E L+L+A
Sbjct: 62 P---GNARKMDKSTVLQKSIDFLRKHKEITAQSDASEIRQDWKPTFLSNEEFTQLMLEAL 118
Query: 301 EGFL 304
+GF
Sbjct: 119 DGFF 122
>sp|Q91YB0|CLOCK_NANGA Circadian locomoter output cycles protein kaput OS=Nannospalax
galili GN=Clock PE=1 SV=1
Length = 865
Score = 56.2 bits (134), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 62/124 (50%), Gaps = 14/124 (11%)
Query: 192 LFSSDLSPRERLIDVKSKQVIVGL-------PVSRQNHSEIEKRRRDKMNTYITELSAMV 244
LF+ S ++D + GL R + ++ EK+RRD+ N I EL +M+
Sbjct: 2 LFTVSCSKMSSIVDRDDSSIFDGLVEEDDKDKAKRVSRNKSEKKRRDQFNVLIKELGSML 61
Query: 245 PMCHAMSRKLDKLTVLRMAVQHLKTIRGAV----HSYTEGHYKPAFLTDQELKHLILQAA 300
P +RK+DK TVL+ ++ L+ + S +KP FL+++E L+L+A
Sbjct: 62 P---GNARKMDKSTVLQKSIDFLRKHKEITAQSDASEIRQDWKPTFLSNEEFTQLMLEAL 118
Query: 301 EGFL 304
+GF
Sbjct: 119 DGFF 122
>sp|Q8QGQ6|CLOCK_CHICK Circadian locomoter output cycles protein kaput OS=Gallus gallus
GN=CLOCK PE=1 SV=2
Length = 875
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 7/83 (8%)
Query: 226 EKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAV----HSYTEGH 281
EK+RRD+ N I EL +M+P +RK+DK TVL+ ++ L+ + S
Sbjct: 43 EKKRRDQFNVLIKELGSMLP---GNARKMDKSTVLQKSIDFLRKHKEITAQSDASEIRQD 99
Query: 282 YKPAFLTDQELKHLILQAAEGFL 304
+KP FL+++E L+L+A +GF
Sbjct: 100 WKPTFLSNEEFTQLMLEALDGFF 122
>sp|Q91YB2|CLOCK_SPACA Circadian locomoter output cycles protein kaput OS=Spalax carmeli
GN=Clock PE=2 SV=1
Length = 865
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 219 RQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAV---- 274
R + ++ EK+RRD+ N I EL +M+P +RK+DK TVL+ ++ L+ +
Sbjct: 36 RVSRNKSEKKRRDQFNVLIKELGSMLP---GNARKMDKSTVLQKSIDFLRKHKEITAQSD 92
Query: 275 HSYTEGHYKPAFLTDQELKHLILQAAEGFL 304
S +KP FL+++E L+L+A +GF
Sbjct: 93 ASEIRQDWKPTFLSNEEFTQLMLEALDGFF 122
>sp|Q6YGZ4|CLOCK_TYTAL Circadian locomoter output cycles protein kaput OS=Tyto alba
GN=CLOCK PE=2 SV=1
Length = 851
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 7/83 (8%)
Query: 226 EKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAV----HSYTEGH 281
EK+RRD+ N I EL +M+P +RK+DK TVL+ ++ L+ + S
Sbjct: 43 EKKRRDQFNVLIKELGSMLP---GNARKMDKSTVLQKSIDFLRKHKEITAQSDASEIRQD 99
Query: 282 YKPAFLTDQELKHLILQAAEGFL 304
+KP FL+++E L+L+A +GF
Sbjct: 100 WKPTFLSNEEFTQLMLEALDGFF 122
>sp|Q91YA8|CLOCK_SPAJD Circadian locomoter output cycles protein kaput OS=Spalax judaei
GN=Clock PE=2 SV=1
Length = 865
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 62/124 (50%), Gaps = 14/124 (11%)
Query: 192 LFSSDLSPRERLIDVKSKQVIVGL-------PVSRQNHSEIEKRRRDKMNTYITELSAMV 244
LF+ S ++D + GL R + ++ EK+RRD+ N I EL +M+
Sbjct: 2 LFTVSCSKMSSIVDRDDSSIFDGLVEEDDKNKAKRVSRNKSEKKRRDQFNVLIKELGSML 61
Query: 245 PMCHAMSRKLDKLTVLRMAVQHLKTIRGAV----HSYTEGHYKPAFLTDQELKHLILQAA 300
P +R++DK TVL+ ++ L+ + S +KP FL+++E L+L+A
Sbjct: 62 P---GNAREMDKSTVLQKSIDFLRKHKEITAQSDASEIRQDWKPTFLSNEEFTQLMLEAL 118
Query: 301 EGFL 304
+GF
Sbjct: 119 DGFF 122
>sp|Q63665|USF2_RAT Upstream stimulatory factor 2 OS=Rattus norvegicus GN=Usf2 PE=1
SV=2
Length = 346
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
Query: 219 RQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRK--LDKLTVLRMAVQHLKTIR 271
R H+E+E+RRRDK+N +I +LS ++P CHA + K K +L A +++ +R
Sbjct: 237 RAQHNEVERRRRDKINNWIVQLSKIIPDCHADNSKTGASKGGILSKACDYIRELR 291
Score = 39.3 bits (90), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 21/24 (87%)
Query: 307 HSEIEKRRRDKMNTYITELSAMVP 330
H+E+E+RRRDK+N +I +LS ++P
Sbjct: 240 HNEVERRRRDKINNWIVQLSKIIP 263
>sp|Q64705|USF2_MOUSE Upstream stimulatory factor 2 OS=Mus musculus GN=Usf2 PE=1 SV=1
Length = 346
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
Query: 219 RQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRK--LDKLTVLRMAVQHLKTIR 271
R H+E+E+RRRDK+N +I +LS ++P CHA + K K +L A +++ +R
Sbjct: 237 RAQHNEVERRRRDKINNWIVQLSKIIPDCHADNSKTGASKGGILSKACDYIRELR 291
Score = 39.3 bits (90), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 21/24 (87%)
Query: 307 HSEIEKRRRDKMNTYITELSAMVP 330
H+E+E+RRRDK+N +I +LS ++P
Sbjct: 240 HNEVERRRRDKINNWIVQLSKIIP 263
>sp|P22415|USF1_HUMAN Upstream stimulatory factor 1 OS=Homo sapiens GN=USF1 PE=1 SV=1
Length = 310
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 23/143 (16%)
Query: 152 GGSSFQHGCAISDLSAQGELLGQS-------WFDILHPKDVAKVKEQLFSSDLSPRERLI 204
GG++ A+ LLGQ+ +F ++ P++V + Q ++PR
Sbjct: 129 GGTTSGSTAAVVTTQGSEALLGQATPPGTGQFFVMMSPQEVLQGGSQ---RSIAPRTHPY 185
Query: 205 DVKSKQVIVGLPVS------RQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRK--LDK 256
KS+ P + R H+E+E+RRRDK+N +I +LS ++P C S K K
Sbjct: 186 SPKSE-----APRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSK 240
Query: 257 LTVLRMAVQHLKTIRGAVHSYTE 279
+L A +++ +R + H +E
Sbjct: 241 GGILSKACDYIQELRQSNHRLSE 263
Score = 39.3 bits (90), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 21/24 (87%)
Query: 307 HSEIEKRRRDKMNTYITELSAMVP 330
H+E+E+RRRDK+N +I +LS ++P
Sbjct: 204 HNEVERRRRDKINNWIVQLSKIIP 227
>sp|Q6XBT4|USF1_BOVIN Upstream stimulatory factor 1 OS=Bos taurus GN=USF1 PE=2 SV=1
Length = 310
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 23/143 (16%)
Query: 152 GGSSFQHGCAISDLSAQGELLGQS-------WFDILHPKDVAKVKEQLFSSDLSPRERLI 204
GG++ A+ LLGQ+ +F ++ P++V + Q ++PR
Sbjct: 129 GGTTSGSTAAVVTTQGSEALLGQATPPGTGQFFVMMSPQEVLQGGSQ---RSIAPRTHPY 185
Query: 205 DVKSKQVIVGLPVS------RQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRK--LDK 256
KS+ P + R H+E+E+RRRDK+N +I +LS ++P C S K K
Sbjct: 186 SPKSE-----APRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSK 240
Query: 257 LTVLRMAVQHLKTIRGAVHSYTE 279
+L A +++ +R + H +E
Sbjct: 241 GGILSKACDYIQELRQSNHRLSE 263
Score = 39.3 bits (90), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 21/24 (87%)
Query: 307 HSEIEKRRRDKMNTYITELSAMVP 330
H+E+E+RRRDK+N +I +LS ++P
Sbjct: 204 HNEVERRRRDKINNWIVQLSKIIP 227
>sp|O02818|USF1_RABIT Upstream stimulatory factor 1 OS=Oryctolagus cuniculus GN=USF1 PE=2
SV=1
Length = 310
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 67/143 (46%), Gaps = 23/143 (16%)
Query: 152 GGSSFQHGCAISDLSAQGELLGQS-------WFDILHPKDVAKVKEQLFSSDLSPRERLI 204
GG++ A+ LLGQ+ +F ++ P++V + Q ++PR
Sbjct: 129 GGTTSGSTAAVVTTQGSEALLGQATPPGTGQFFVMMSPQEVLQGGSQ---RSIAPRTHPY 185
Query: 205 DVKSKQVIVGLPVS------RQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRK--LDK 256
KS P + R H+E+E+RRRDK+N +I +LS ++P C S K K
Sbjct: 186 SPKS-----AAPRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSK 240
Query: 257 LTVLRMAVQHLKTIRGAVHSYTE 279
+L A +++ +R + H +E
Sbjct: 241 GGILSKACDYIQELRQSNHRLSE 263
Score = 39.3 bits (90), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 21/24 (87%)
Query: 307 HSEIEKRRRDKMNTYITELSAMVP 330
H+E+E+RRRDK+N +I +LS ++P
Sbjct: 204 HNEVERRRRDKINNWIVQLSKIIP 227
>sp|Q6QB00|HELT_DANRE Hairy and enhancer of split-related protein helt OS=Danio rerio
GN=helt PE=2 SV=1
Length = 270
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 216 PVSRQNHSEIEKRRRDKMNTYITELSAMVPMCHAM--SRKLDKLTVLRMAVQHLKTIRGA 273
PVS H IEKRRRD++N + EL VPM A S KL+K +L M VQ+L+ + A
Sbjct: 61 PVS---HKVIEKRRRDRINRCLNELGKTVPMALAKQNSGKLEKAEILEMTVQYLRALHSA 117
Query: 274 VHSYTEGHYKPAFLTD 289
+ G K LT+
Sbjct: 118 --DFPRGREKGELLTE 131
>sp|Q15853|USF2_HUMAN Upstream stimulatory factor 2 OS=Homo sapiens GN=USF2 PE=2 SV=1
Length = 346
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
Query: 219 RQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRK--LDKLTVLRMAVQHLKTIR 271
R H+E+E+RRRDK+N +I +LS ++P C+A + K K +L A +++ +R
Sbjct: 237 RAQHNEVERRRRDKINNWIVQLSKIIPDCNADNSKTGASKGGILSKACDYIRELR 291
Score = 39.3 bits (90), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 21/24 (87%)
Query: 307 HSEIEKRRRDKMNTYITELSAMVP 330
H+E+E+RRRDK+N +I +LS ++P
Sbjct: 240 HNEVERRRRDKINNWIVQLSKIIP 263
>sp|Q7TS99|HELT_MOUSE Hairy and enhancer of split-related protein HELT OS=Mus musculus
GN=Helt PE=1 SV=1
Length = 240
Score = 47.8 bits (112), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 36/60 (60%), Gaps = 5/60 (8%)
Query: 216 PVSRQNHSEIEKRRRDKMNTYITELSAMVPMCHAM--SRKLDKLTVLRMAVQHLKTIRGA 273
PVS H IEKRRRD++N + EL VPM A S KL+K +L M VQ+L+ + A
Sbjct: 12 PVS---HKVIEKRRRDRINRCLNELGKTVPMALAKQSSGKLEKAEILEMTVQYLRALHSA 68
>sp|Q61069|USF1_MOUSE Upstream stimulatory factor 1 OS=Mus musculus GN=Usf1 PE=2 SV=1
Length = 310
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 219 RQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRK--LDKLTVLRMAVQHLKTIRGAVHS 276
R H+E+E+RRRDK+N +I +LS ++P C S K K +L A +++ +R + H
Sbjct: 201 RAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKACDYIQELRQSNHR 260
Query: 277 YTE 279
+E
Sbjct: 261 LSE 263
Score = 39.3 bits (90), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 21/24 (87%)
Query: 307 HSEIEKRRRDKMNTYITELSAMVP 330
H+E+E+RRRDK+N +I +LS ++P
Sbjct: 204 HNEVERRRRDKINNWIVQLSKIIP 227
>sp|Q7KM13|HEY_DROME Hairy/enhancer-of-split related with YRPW motif protein
OS=Drosophila melanogaster GN=Hey PE=2 SV=1
Length = 425
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 36/49 (73%), Gaps = 2/49 (4%)
Query: 225 IEKRRRDKMNTYITELSAMVPMCHAM--SRKLDKLTVLRMAVQHLKTIR 271
IEK+RRD++N+ +TEL +VP + S KL+K +L++ V+HLK+++
Sbjct: 108 IEKKRRDRINSSLTELKRLVPSAYEKQGSAKLEKAEILQLTVEHLKSLQ 156
>sp|Q9JHS1|EPAS1_RAT Endothelial PAS domain-containing protein 1 OS=Rattus norvegicus
GN=Epas1 PE=2 SV=1
Length = 874
Score = 46.2 bits (108), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 6/78 (7%)
Query: 229 RRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKT--IRGAVHSYTEGHYKPAF 286
RR K EL+ +P+ H++S LDK +++R+A+ L+T + +V S E +
Sbjct: 26 RRSKETEVFYELAHELPLPHSVSSHLDKASIMRLAISFLRTHKLLSSVCSENESEAE--- 82
Query: 287 LTDQELKHLILQAAEGFL 304
DQ++ +L L+A EGF+
Sbjct: 83 -ADQQMDNLYLKALEGFI 99
>sp|P97481|EPAS1_MOUSE Endothelial PAS domain-containing protein 1 OS=Mus musculus
GN=Epas1 PE=1 SV=2
Length = 874
Score = 46.2 bits (108), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%), Gaps = 6/78 (7%)
Query: 229 RRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKT--IRGAVHSYTEGHYKPAF 286
RR K EL+ +P+ H++S LDK +++R+A+ L+T + +V S E +
Sbjct: 26 RRSKETEVFYELAHELPLPHSVSSHLDKASIMRLAISFLRTHKLLSSVCSENESEAE--- 82
Query: 287 LTDQELKHLILQAAEGFL 304
DQ++ +L L+A EGF+
Sbjct: 83 -ADQQMDNLYLKALEGFI 99
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.128 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 213,205,984
Number of Sequences: 539616
Number of extensions: 9230069
Number of successful extensions: 35574
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 132
Number of HSP's successfully gapped in prelim test: 185
Number of HSP's that attempted gapping in prelim test: 33951
Number of HSP's gapped (non-prelim): 1633
length of query: 563
length of database: 191,569,459
effective HSP length: 123
effective length of query: 440
effective length of database: 125,196,691
effective search space: 55086544040
effective search space used: 55086544040
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 64 (29.3 bits)