Your job contains 1 sequence.
>psy14584
MQESSYYSRLLSTTEEGPQDFLCLDEYRPLQDNVLSHSVYYDLQPVQRSTCSTSTYVEDG
QIPSSSVHPMEYQQADSTRKSKKRKGGSSFHGSDFEEDTGEDSGKSLKLDDSKKSTCSTS
TYVEDGQIPSSSVHPMEYQQADSTRKSKKRKGGSSFQHGCAISDLSAQGELLGQSWFDIL
HPKDVAKVKEQLFSSDLSPRERLIDVKSKQVIVGLPVSRQNHSEIEKRRRDKMNTYITEL
SAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSYTEGHYKPAFLTDQELKHLILQAA
EGFLQNHSEIEKRRRDKMNTYITELSAMVPTLLPVKTADIPAEVSRLCPGARRSFFCRMK
CKHTPASSSSSSSSNSAPSTQPGPNTPSPGTGSCVKEEPDTTTGAAASCHRKKKQQQSDR
KYSVIQCTGYLKSWAPAKMGLEESEDRKYSVIQCTGYLKSWAPAKMGLEESEGEGEGGET
CTLSCLVAVGRVLADKTRILNKQVNLRPIQFLSRHALDGKFLFVYQFKNKGGTYVQLQSE
WKNFRNPWTKDIEYLISKNTLIL
The BLAST search returned 8 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy14584
(563 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0023094 - symbol:cyc "cycle" species:7227 "Drosoph... 330 1.3e-68 4
UNIPROTKB|Q9I8T7 - symbol:ARNTL "Aryl hydrocarbon recepto... 345 2.7e-64 4
UNIPROTKB|F8W6J9 - symbol:ARNTL "Aryl hydrocarbon recepto... 341 1.8e-62 4
UNIPROTKB|O00327 - symbol:ARNTL "Aryl hydrocarbon recepto... 341 7.5e-61 4
UNIPROTKB|A0MLS5 - symbol:ARNTL "Aryl hydrocarbon recepto... 341 7.5e-61 4
UNIPROTKB|O88529 - symbol:ARNTL "Aryl hydrocarbon recepto... 341 9.6e-61 4
UNIPROTKB|E1BLF5 - symbol:ARNTL "Uncharacterized protein"... 341 9.6e-61 4
UNIPROTKB|E2R130 - symbol:ARNTL "Uncharacterized protein"... 341 9.8e-61 4
MGI|MGI:1096381 - symbol:Arntl "aryl hydrocarbon receptor... 341 1.1e-60 4
UNIPROTKB|J9NTT7 - symbol:ARNTL "Uncharacterized protein"... 341 2.0e-60 4
UNIPROTKB|Q91YA9 - symbol:Arntl "Aryl hydrocarbon recepto... 341 6.5e-60 4
RGD|62003 - symbol:Arntl "aryl hydrocarbon receptor nucle... 333 3.1e-58 4
UNIPROTKB|Q9EPW1 - symbol:Arntl "Aryl hydrocarbon recepto... 333 3.1e-58 4
ZFIN|ZDB-GENE-000509-1 - symbol:arntl1a "aryl hydrocarbon... 345 4.4e-54 3
ZFIN|ZDB-GENE-030408-1 - symbol:arntl1b "aryl hydrocarbon... 345 7.9e-54 3
UNIPROTKB|Q5R4T2 - symbol:ARNTL "Aryl hydrocarbon recepto... 341 1.5e-51 3
UNIPROTKB|Q8QGQ7 - symbol:ARNTL2 "Aryl hydrocarbon recept... 310 1.1e-49 4
UNIPROTKB|E1C1C5 - symbol:ARNTL2 "Aryl hydrocarbon recept... 310 1.2e-49 4
UNIPROTKB|F1NQL8 - symbol:ARNTL2 "Aryl hydrocarbon recept... 310 1.8e-49 4
ZFIN|ZDB-GENE-000509-2 - symbol:arntl2 "aryl hydrocarbon ... 325 3.3e-48 3
UNIPROTKB|H0Y5R1 - symbol:ARNTL2 "Aryl hydrocarbon recept... 308 5.3e-48 4
UNIPROTKB|Q8WYA1 - symbol:ARNTL2 "Aryl hydrocarbon recept... 304 5.8e-47 4
UNIPROTKB|A6NGV6 - symbol:ARNT "Aryl hydrocarbon receptor... 324 2.9e-46 3
UNIPROTKB|J9P3T5 - symbol:ARNTL2 "Uncharacterized protein... 301 3.9e-46 4
UNIPROTKB|F1SG81 - symbol:ARNTL2 "Uncharacterized protein... 288 7.9e-46 4
UNIPROTKB|F1PZY3 - symbol:ARNTL2 "Uncharacterized protein... 295 6.0e-45 4
ZFIN|ZDB-GENE-001207-3 - symbol:arnt2 "aryl hydrocarbon r... 316 2.7e-44 4
UNIPROTKB|E1BS65 - symbol:ARNT2 "Uncharacterized protein"... 318 8.2e-44 4
UNIPROTKB|K7GNG1 - symbol:ARNT "Uncharacterized protein" ... 323 8.9e-44 4
UNIPROTKB|H9L0U2 - symbol:ARNT "Uncharacterized protein" ... 323 1.1e-43 4
RGD|2154 - symbol:Arnt2 "aryl hydrocarbon receptor nuclea... 318 1.2e-43 4
MGI|MGI:107188 - symbol:Arnt2 "aryl hydrocarbon receptor ... 318 1.2e-43 4
UNIPROTKB|Q9HBZ2 - symbol:ARNT2 "Aryl hydrocarbon recepto... 318 1.2e-43 4
UNIPROTKB|F1MYI1 - symbol:ARNT "Aryl hydrocarbon receptor... 323 1.3e-43 4
UNIPROTKB|F8WAP6 - symbol:ARNT "Aryl hydrocarbon receptor... 324 1.3e-43 4
UNIPROTKB|P27540 - symbol:ARNT "Aryl hydrocarbon receptor... 324 1.4e-43 4
MGI|MGI:88071 - symbol:Arnt "aryl hydrocarbon receptor nu... 324 1.8e-43 4
UNIPROTKB|Q9BE97 - symbol:ARNT "Aryl hydrocarbon receptor... 323 1.8e-43 4
UNIPROTKB|F1LMF9 - symbol:Arnt "Aryl hydrocarbon receptor... 324 2.0e-43 4
UNIPROTKB|F6V057 - symbol:ARNT "Uncharacterized protein" ... 323 2.1e-43 4
UNIPROTKB|F1SS94 - symbol:ARNT "Uncharacterized protein" ... 323 2.1e-43 4
UNIPROTKB|E2QT96 - symbol:ARNT "Uncharacterized protein" ... 323 2.3e-43 4
UNIPROTKB|E9PTS2 - symbol:Arnt "Aryl hydrocarbon receptor... 323 2.8e-43 4
ZFIN|ZDB-GENE-060126-7 - symbol:arnt "aryl hydrocarbon re... 322 3.2e-43 4
UNIPROTKB|E1BS64 - symbol:ARNT2 "Uncharacterized protein"... 315 3.9e-43 4
UNIPROTKB|F1PPH3 - symbol:ARNT2 "Uncharacterized protein"... 318 5.2e-43 4
UNIPROTKB|Q98SN3 - symbol:ARNT "Aryl hydrocarbon receptor... 323 8.9e-43 4
UNIPROTKB|F1N4Q7 - symbol:ARNTL2 "Uncharacterized protein... 279 9.3e-43 4
UNIPROTKB|K7GQY6 - symbol:ARNT "Uncharacterized protein" ... 323 1.3e-42 3
FB|FBgn0264075 - symbol:tgo "tango" species:7227 "Drosoph... 314 4.4e-42 4
RGD|2153 - symbol:Arnt "aryl hydrocarbon receptor nuclear... 324 1.4e-41 4
UNIPROTKB|P79832 - symbol:arnt "Aryl hydrocarbon receptor... 318 4.1e-41 4
UNIPROTKB|F1S6X1 - symbol:LOC100738978 "Uncharacterized p... 341 5.2e-41 2
UNIPROTKB|J9P204 - symbol:ARNT "Uncharacterized protein" ... 323 5.5e-41 4
RGD|620230 - symbol:Arntl2 "aryl hydrocarbon receptor nuc... 242 1.7e-38 4
MGI|MGI:2684845 - symbol:Arntl2 "aryl hydrocarbon recepto... 242 4.8e-37 3
UNIPROTKB|E9PPV4 - symbol:ARNTL "Aryl hydrocarbon recepto... 341 5.4e-31 1
UNIPROTKB|C8YTM6 - symbol:aha-1 "AHA-1" species:31234 "Ca... 290 1.1e-30 3
UNIPROTKB|C8YTN2 - symbol:aha-1 "AHA-1" species:31234 "Ca... 290 1.1e-30 3
UNIPROTKB|Q9DG35 - symbol:BMAL1 "BHLH-PAS transcription f... 325 2.7e-29 1
UNIPROTKB|G3N3F0 - symbol:G3N3F0 "Uncharacterized protein... 318 1.6e-28 1
UNIPROTKB|F1RIF2 - symbol:ARNT2 "Uncharacterized protein"... 318 1.6e-28 1
UNIPROTKB|E3MG64 - symbol:Cre-aha-1 "CRE-AHA-1 protein" s... 290 2.8e-27 3
UNIPROTKB|G0P4X6 - symbol:CAEBREN_20344 "Putative unchara... 289 4.2e-27 3
WB|WBGene00000095 - symbol:aha-1 species:6239 "Caenorhabd... 288 6.4e-27 3
UNIPROTKB|O02219 - symbol:aha-1 "Aryl hydrocarbon recepto... 288 6.4e-27 3
UNIPROTKB|A8XEY9 - symbol:aha-1 "Protein CBR-AHA-1" speci... 260 2.0e-22 3
UNIPROTKB|E9PKF0 - symbol:ARNTL "Aryl hydrocarbon recepto... 243 5.5e-20 1
UNIPROTKB|K7GSB9 - symbol:ARNT "Uncharacterized protein" ... 233 6.9e-19 1
UNIPROTKB|D4ADP3 - symbol:D4ADP3 "Uncharacterized protein... 241 4.9e-17 2
UNIPROTKB|F1S978 - symbol:ARNTL "Uncharacterized protein"... 133 2.8e-15 2
UNIPROTKB|E9PI92 - symbol:ARNTL "Aryl hydrocarbon recepto... 166 1.4e-11 1
UNIPROTKB|H0YKW1 - symbol:ARNT2 "Aryl hydrocarbon recepto... 110 9.0e-11 2
UNIPROTKB|H0YER9 - symbol:ARNTL "Aryl hydrocarbon recepto... 133 1.5e-10 2
UNIPROTKB|H7C0J4 - symbol:NPAS2 "Neuronal PAS domain-cont... 137 1.9e-08 1
UNIPROTKB|C9JK03 - symbol:CLOCK "Circadian locomoter outp... 134 4.0e-08 1
UNIPROTKB|J9P4Q7 - symbol:NPAS2 "Uncharacterized protein"... 142 5.8e-08 3
UNIPROTKB|H7BZA3 - symbol:NPAS2 "Neuronal PAS domain-cont... 135 1.3e-07 2
RGD|1309681 - symbol:Npas2 "neuronal PAS domain protein 2... 140 2.1e-07 3
UNIPROTKB|H7C0Z2 - symbol:NPAS2 "Neuronal PAS domain-cont... 139 2.2e-07 1
UNIPROTKB|F1NGR0 - symbol:F1NGR0 "Uncharacterized protein... 135 2.2e-07 3
UNIPROTKB|F6QL92 - symbol:NPAS2 "Uncharacterized protein"... 139 2.4e-07 3
UNIPROTKB|F1STF9 - symbol:NPAS2 "Uncharacterized protein"... 139 2.4e-07 3
UNIPROTKB|F1PPU8 - symbol:NPAS2 "Uncharacterized protein"... 139 2.7e-07 3
UNIPROTKB|Q99743 - symbol:NPAS2 "Neuronal PAS domain-cont... 139 2.8e-07 3
UNIPROTKB|F1MYL2 - symbol:ARNT2 "Uncharacterized protein"... 82 3.0e-07 3
MGI|MGI:109232 - symbol:Npas2 "neuronal PAS domain protei... 138 3.4e-07 3
UNIPROTKB|F5H027 - symbol:NPAS2 "Neuronal PAS domain-cont... 139 3.6e-07 3
UNIPROTKB|F1P5G3 - symbol:NPAS2 "Neuronal PAS domain-cont... 139 4.2e-07 3
UNIPROTKB|Q5ZQU2 - symbol:NPAS2 "Neuronal PAS domain-cont... 139 4.2e-07 3
UNIPROTKB|F1RVI1 - symbol:CLOCK "Uncharacterized protein"... 134 4.2e-07 2
UNIPROTKB|E1BZV0 - symbol:NPAS2 "Neuronal PAS domain-cont... 139 4.2e-07 3
ZFIN|ZDB-GENE-030408-2 - symbol:clock3 "clock homolog 3 (... 137 1.5e-06 2
MGI|MGI:99698 - symbol:Clock "circadian locomotor output ... 137 1.6e-06 2
ZFIN|ZDB-GENE-030408-3 - symbol:npas2 "neuronal PAS domai... 128 2.3e-06 3
FB|FBgn0023076 - symbol:Clk "Clock" species:7227 "Drosoph... 145 2.7e-06 3
UNIPROTKB|D4A4R8 - symbol:Clock "Circadian locomoter outp... 134 3.2e-06 2
UNIPROTKB|F1MLT7 - symbol:CLOCK "Uncharacterized protein"... 134 3.3e-06 2
UNIPROTKB|O15516 - symbol:CLOCK "Circadian locomoter outp... 134 3.3e-06 2
UNIPROTKB|Q5RAK8 - symbol:CLOCK "Circadian locomoter outp... 134 3.3e-06 2
WARNING: Descriptions of 32 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0023094 [details] [associations]
symbol:cyc "cycle" species:7227 "Drosophila melanogaster"
[GO:0000977 "RNA polymerase II regulatory region sequence-specific
DNA binding" evidence=IPI] [GO:0046982 "protein heterodimerization
activity" evidence=NAS;IPI] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;NAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0007623 "circadian rhythm"
evidence=NAS;TAS] [GO:0008062 "eclosion rhythm" evidence=NAS;TAS]
[GO:0045475 "locomotor rhythm" evidence=NAS;TAS] [GO:0048148
"behavioral response to cocaine" evidence=NAS;TAS] [GO:0045187
"regulation of circadian sleep/wake cycle, sleep" evidence=IMP;TAS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=NAS;TAS] [GO:0007622 "rhythmic behavior" evidence=TAS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=NAS;TAS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=NAS] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0032922 "circadian regulation of gene expression" evidence=IMP]
[GO:0042594 "response to starvation" evidence=IDA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005634 GO:GO:0005737 EMBL:AE014296 GO:GO:0003677
GO:GO:0045187 GO:GO:0045944 GO:GO:0042594 GO:GO:0003700
GO:GO:0006351 GO:GO:0005667 GO:GO:0000122 GO:GO:0004871
GO:GO:0046982 GO:GO:0048148 GO:GO:0045475 GO:GO:0032922
SMART:SM00086 eggNOG:NOG293303 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 KO:K02296 GO:GO:0008062
EMBL:AF065473 EMBL:AF067206 EMBL:AF069998 EMBL:AY119284
EMBL:BT025197 RefSeq:NP_524168.2 UniGene:Dm.1004
ProteinModelPortal:O61734 SMR:O61734 IntAct:O61734
MINT:MINT-1328881 STRING:O61734 PRIDE:O61734
EnsemblMetazoa:FBtr0074924 GeneID:40162 KEGG:dme:Dmel_CG8727
CTD:40162 FlyBase:FBgn0023094 InParanoid:O61734 OMA:EQCPRER
OrthoDB:EOG46WWQT PhylomeDB:O61734 GenomeRNAi:40162 NextBio:817333
Bgee:O61734 GermOnline:CG8727 Uniprot:O61734
Length = 413
Score = 330 (121.2 bits), Expect = 1.3e-68, Sum P(4) = 1.3e-68
Identities = 64/88 (72%), Positives = 76/88 (86%)
Query: 219 RQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGA--VHS 276
+QNHSEIEKRRRDKMNTYI ELS+M+PMC AM RKLDKLTVLRMAVQHL+ IRG+ +H
Sbjct: 32 KQNHSEIEKRRRDKMNTYINELSSMIPMCFAMQRKLDKLTVLRMAVQHLRGIRGSGSLHP 91
Query: 277 YTEGHYKPAFLTDQELKHLILQAAEGFL 304
+ Y+P+FL+DQELK +ILQA+EGFL
Sbjct: 92 FNGSDYRPSFLSDQELKMIILQASEGFL 119
Score = 162 (62.1 bits), Expect = 8.6e-39, Sum P(4) = 8.6e-39
Identities = 30/43 (69%), Positives = 35/43 (81%)
Query: 166 SAQGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKS 208
S Q +LLGQSWFD+LHPKD+ KVKEQL S + PRERLID K+
Sbjct: 142 STQADLLGQSWFDVLHPKDIGKVKEQLSSLEQCPRERLIDAKT 184
Score = 142 (55.0 bits), Expect = 1.3e-68, Sum P(4) = 1.3e-68
Identities = 22/40 (55%), Positives = 34/40 (85%)
Query: 524 VYQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNTLIL 563
VY+F+ K +Y+QLQSEW+ F+NPWT +I+Y+I+KN++ L
Sbjct: 374 VYRFRCKDNSYIQLQSEWRAFKNPWTSEIDYIIAKNSVFL 413
Score = 139 (54.0 bits), Expect = 1.3e-68, Sum P(4) = 1.3e-68
Identities = 34/84 (40%), Positives = 45/84 (53%)
Query: 448 KYSVIQCTGYLKSWAPAKMXXXXXXXXXXXXXXXXXXXLVAVGRV---LADKT--RILNK 502
KY VIQCTGYLKSW P K LVA+GR+ + + T L+
Sbjct: 246 KYRVIQCTGYLKSWTPIK---DEDQDADSDEQTTNLSCLVAIGRIPPNVRNSTVPASLDN 302
Query: 503 QVNLRPIQFLSRHALDGKFLFVYQ 526
N+R + F+SRH+ +GKFLF+ Q
Sbjct: 303 HPNIRHVLFISRHSGEGKFLFIDQ 326
Score = 124 (48.7 bits), Expect = 1.3e-68, Sum P(4) = 1.3e-68
Identities = 23/32 (71%), Positives = 27/32 (84%)
Query: 331 TLLPVKTADIPAEVSRLCPGARRSFFCRMKCK 362
T+LPVKT D+P + RLCPGARRSFFCRMK +
Sbjct: 184 TMLPVKT-DVPQSLCRLCPGARRSFFCRMKLR 214
Score = 124 (48.7 bits), Expect = 1.8e-34, Sum P(4) = 1.8e-34
Identities = 23/26 (88%), Positives = 25/26 (96%)
Query: 305 QNHSEIEKRRRDKMNTYITELSAMVP 330
QNHSEIEKRRRDKMNTYI ELS+M+P
Sbjct: 33 QNHSEIEKRRRDKMNTYINELSSMIP 58
Score = 122 (48.0 bits), Expect = 8.0e-67, Sum P(4) = 8.0e-67
Identities = 25/61 (40%), Positives = 39/61 (63%)
Query: 395 VKEEPDTTTGAAASCHRKKKQQQSDRKYSVIQCTGYLKSWAPAKMGLEESE-DRKYSVIQ 453
+KEE DT++ + +S RK + + KY VIQCTGYLKSW P K ++++ D + + +
Sbjct: 221 IKEESDTSSSSRSSTKRKSRLT-TGHKYRVIQCTGYLKSWTPIKDEDQDADSDEQTTNLS 279
Query: 454 C 454
C
Sbjct: 280 C 280
Score = 49 (22.3 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 8/21 (38%), Positives = 15/21 (71%)
Query: 170 ELLGQSWFDILHPKDVAKVKE 190
E+LG S+++ H +D+A + E
Sbjct: 338 EILGTSFYEYFHNEDIAALME 358
>UNIPROTKB|Q9I8T7 [details] [associations]
symbol:ARNTL "Aryl hydrocarbon receptor nuclear
translocator-like protein 1" species:9031 "Gallus gallus"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000060 "protein import into nucleus,
translocation" evidence=IEA] [GO:0000982 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0001190 "RNA
polymerase II transcription factor binding transcription factor
activity involved in positive regulation of transcription"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0016604 "nuclear
body" evidence=IEA] [GO:0017162 "aryl hydrocarbon receptor binding"
evidence=IEA] [GO:0032922 "circadian regulation of gene expression"
evidence=IEA] [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] [GO:0043425 "bHLH transcription factor binding"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0051879 "Hsp90 protein binding" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005737 GO:GO:0003677 GO:GO:0007623 GO:GO:0005667
GO:GO:0000060 GO:GO:0004871 GO:GO:0000982 SMART:SM00086
TIGRFAMs:TIGR00229 GO:GO:0001190 eggNOG:NOG293303
GeneTree:ENSGT00650000092935 HOGENOM:HOG000234379
Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956 GO:GO:0042176
EMBL:AF205219 EMBL:AF246957 IPI:IPI00577807 RefSeq:NP_001001463.1
UniGene:Gga.1329 ProteinModelPortal:Q9I8T7 STRING:Q9I8T7
Ensembl:ENSGALT00000032732 GeneID:374115 KEGG:gga:374115 CTD:406
HOVERGEN:HBG107503 InParanoid:Q9I8T7 KO:K02296 OMA:EKINTNC
OrthoDB:EOG4NS3B2 NextBio:20813631 ArrayExpress:Q9I8T7
Uniprot:Q9I8T7
Length = 633
Score = 345 (126.5 bits), Expect = 2.7e-64, Sum P(4) = 2.7e-64
Identities = 64/87 (73%), Positives = 80/87 (91%)
Query: 218 SRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSY 277
+R+ HS+IEKRRRDKMN++I EL+++VP C+AMSRKLDKLTVLRMAVQH+KT+RGA + Y
Sbjct: 80 AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY 139
Query: 278 TEGHYKPAFLTDQELKHLILQAAEGFL 304
TE +YKPAFL+D ELKHLIL+AA+GFL
Sbjct: 140 TEANYKPAFLSDDELKHLILRAADGFL 166
Score = 161 (61.7 bits), Expect = 2.7e-34, Sum P(4) = 2.7e-34
Identities = 34/51 (66%), Positives = 40/51 (78%)
Query: 167 AQGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQVIVGLPV 217
+Q +L+GQS FD LHPKD+AKVKEQL SSD +PRERLID K+ GLPV
Sbjct: 190 SQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKT-----GLPV 235
Score = 135 (52.6 bits), Expect = 2.7e-64, Sum P(4) = 2.7e-64
Identities = 30/92 (32%), Positives = 50/92 (54%)
Query: 436 PAKMGLEESEDRKYSVIQCTGYLKSWAPAKMXXXXXXXXXXXXXXXXXXXLVAVGRVLAD 495
P+ ++++ + + I TGYLKSW P KM LVA+GR+
Sbjct: 273 PSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSC--LVAIGRLHPH 330
Query: 496 KT-RILNKQVNLRPIQFLSRHALDGKFLFVYQ 526
+ +N ++ ++P +++SRHA+DGKF+FV Q
Sbjct: 331 VVPQPVNGEIRVKPTEYVSRHAIDGKFVFVDQ 362
Score = 129 (50.5 bits), Expect = 2.7e-64, Sum P(4) = 2.7e-64
Identities = 19/38 (50%), Positives = 31/38 (81%)
Query: 525 YQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNTLI 562
Y+FK K G+++ L+S W +F NPWTK++EY++S NT++
Sbjct: 411 YKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVV 448
Score = 111 (44.1 bits), Expect = 2.7e-64, Sum P(4) = 2.7e-64
Identities = 24/31 (77%), Positives = 24/31 (77%)
Query: 331 TLLPVKTADIPAEVSRLCPGARRSFFCRMKC 361
T LPVKT DI SRLC GARRSFFCRMKC
Sbjct: 231 TGLPVKT-DITPGPSRLCSGARRSFFCRMKC 260
Score = 107 (42.7 bits), Expect = 2.1e-28, Sum P(4) = 2.1e-28
Identities = 25/50 (50%), Positives = 37/50 (74%)
Query: 288 TDQELKHLILQAAE--GFLQN----HSEIEKRRRDKMNTYITELSAMVPT 331
TD++ +H L A+ G ++N HS+IEKRRRDKMN++I EL+++VPT
Sbjct: 59 TDKDDQHGRLDYADQQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPT 108
Score = 97 (39.2 bits), Expect = 2.4e-60, Sum P(4) = 2.4e-60
Identities = 20/41 (48%), Positives = 27/41 (65%)
Query: 407 ASCHRKKKQQQSDRK-YSVIQCTGYLKSWAPAKMGLEESED 446
++C +KK +DRK + I TGYLKSW P KMGL+E +
Sbjct: 274 STCSKKK----ADRKSFCTIHSTGYLKSWPPTKMGLDEDNE 310
Score = 45 (20.9 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 170 ELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERL 203
ELLG S ++ H D+ + E L RE++
Sbjct: 374 ELLGTSCYEYFHQDDIGHLAE-CHRQVLQTREKI 406
>UNIPROTKB|F8W6J9 [details] [associations]
symbol:ARNTL "Aryl hydrocarbon receptor nuclear
translocator-like protein 1" species:9606 "Homo sapiens"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0005667 GO:GO:0004871 SMART:SM00086
TIGRFAMs:TIGR00229 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC016884
EMBL:AC022878 IPI:IPI00217732 HGNC:HGNC:701
ProteinModelPortal:F8W6J9 SMR:F8W6J9 Ensembl:ENST00000389708
ArrayExpress:F8W6J9 Bgee:F8W6J9 Uniprot:F8W6J9
Length = 526
Score = 341 (125.1 bits), Expect = 1.8e-62, Sum P(4) = 1.8e-62
Identities = 63/87 (72%), Positives = 79/87 (90%)
Query: 218 SRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSY 277
+R+ HS+IEKRRRDKMN++I EL+++VP C+AMSRKLDKLTVLRMAVQH+KT+RGA + Y
Sbjct: 73 AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY 132
Query: 278 TEGHYKPAFLTDQELKHLILQAAEGFL 304
TE +YKP FL+D ELKHLIL+AA+GFL
Sbjct: 133 TEANYKPTFLSDDELKHLILRAADGFL 159
Score = 161 (61.7 bits), Expect = 8.3e-35, Sum P(4) = 8.3e-35
Identities = 34/51 (66%), Positives = 40/51 (78%)
Query: 167 AQGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQVIVGLPV 217
+Q +L+GQS FD LHPKD+AKVKEQL SSD +PRERLID K+ GLPV
Sbjct: 183 SQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKT-----GLPV 228
Score = 133 (51.9 bits), Expect = 1.8e-62, Sum P(4) = 1.8e-62
Identities = 20/39 (51%), Positives = 32/39 (82%)
Query: 525 YQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNTLIL 563
Y+FK K G+++ L+S W +F NPWTK++EY++S NT++L
Sbjct: 404 YKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVL 442
Score = 131 (51.2 bits), Expect = 1.8e-62, Sum P(4) = 1.8e-62
Identities = 29/92 (31%), Positives = 51/92 (55%)
Query: 436 PAKMGLEESEDRKYSVIQCTGYLKSWAPAKMXXXXXXXXXXXXXXXXXXXLVAVGRVLAD 495
P+ ++++ + + I TGYLKSW P KM LVA+GR+ +
Sbjct: 266 PSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSC--LVAIGRLHSH 323
Query: 496 KT-RILNKQVNLRPIQFLSRHALDGKFLFVYQ 526
+ +N ++ ++ ++++SRHA+DGKF+FV Q
Sbjct: 324 VVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQ 355
Score = 111 (44.1 bits), Expect = 1.8e-62, Sum P(4) = 1.8e-62
Identities = 24/31 (77%), Positives = 24/31 (77%)
Query: 331 TLLPVKTADIPAEVSRLCPGARRSFFCRMKC 361
T LPVKT DI SRLC GARRSFFCRMKC
Sbjct: 224 TGLPVKT-DITPGPSRLCSGARRSFFCRMKC 253
Score = 110 (43.8 bits), Expect = 3.9e-29, Sum P(4) = 3.9e-29
Identities = 26/56 (46%), Positives = 39/56 (69%)
Query: 282 YKPAFLTDQELKHLILQAAE--GFLQN----HSEIEKRRRDKMNTYITELSAMVPT 331
Y+ + TD++ H L+ E G ++N HS+IEKRRRDKMN++I EL+++VPT
Sbjct: 46 YQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPT 101
Score = 97 (39.2 bits), Expect = 6.2e-59, Sum P(4) = 6.2e-59
Identities = 20/41 (48%), Positives = 27/41 (65%)
Query: 407 ASCHRKKKQQQSDRK-YSVIQCTGYLKSWAPAKMGLEESED 446
++C +KK +DRK + I TGYLKSW P KMGL+E +
Sbjct: 267 STCSKKK----ADRKSFCTIHSTGYLKSWPPTKMGLDEDNE 303
Score = 45 (20.9 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 170 ELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERL 203
ELLG S ++ H D+ + E L RE++
Sbjct: 367 ELLGTSCYEYFHQDDIGHLAE-CHRQVLQTREKI 399
>UNIPROTKB|O00327 [details] [associations]
symbol:ARNTL "Aryl hydrocarbon receptor nuclear
translocator-like protein 1" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000060 "protein import into nucleus,
translocation" evidence=IEA] [GO:0001190 "RNA polymerase II
transcription factor binding transcription factor activity involved
in positive regulation of transcription" evidence=IEA] [GO:0016604
"nuclear body" evidence=IEA] [GO:0042176 "regulation of protein
catabolic process" evidence=IEA] [GO:0043425 "bHLH transcription
factor binding" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0007623 "circadian
rhythm" evidence=TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0032922 "circadian regulation of
gene expression" evidence=ISS] [GO:0003677 "DNA binding"
evidence=IGI] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IGI;IDA] [GO:0017162
"aryl hydrocarbon receptor binding" evidence=IPI] [GO:0051879
"Hsp90 protein binding" evidence=IDA] [GO:0000982 "RNA polymerase
II core promoter proximal region sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005737
EMBL:CH471064 GO:GO:0003677 GO:GO:0045944 GO:GO:0005667
GO:GO:0000060 GO:GO:0004871 GO:GO:0000982 GO:GO:0032922
SMART:SM00086 TIGRFAMs:TIGR00229 GO:GO:0001190 eggNOG:NOG293303
HOGENOM:HOG000234379 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0051879 GO:GO:0042176 Pathway_Interaction_DB:circadianpathway
Reactome:REACT_24941 CTD:406 HOVERGEN:HBG107503 KO:K02296
OMA:EKINTNC OrthoDB:EOG4NS3B2 EMBL:D89722 EMBL:AB000812
EMBL:AB000813 EMBL:AB000814 EMBL:AB000815 EMBL:AB000816 EMBL:U51627
EMBL:U60415 EMBL:AF044288 EMBL:AK095749 EMBL:AK291510 EMBL:EF015894
EMBL:AC016884 EMBL:AC022878 EMBL:BC016674 EMBL:BC031214
EMBL:BC041129 IPI:IPI00217732 IPI:IPI00217734 IPI:IPI00217735
IPI:IPI00217736 IPI:IPI00412162 IPI:IPI00413132 IPI:IPI00783543
IPI:IPI00879656 IPI:IPI00910251 PIR:JC5405 PIR:JC5407 PIR:PC4288
PIR:PC4289 RefSeq:NP_001025443.1 RefSeq:NP_001025444.1
RefSeq:NP_001169.3 UniGene:Hs.65734 PDB:4H10 PDBsum:4H10
ProteinModelPortal:O00327 SMR:O00327 IntAct:O00327 STRING:O00327
PhosphoSite:O00327 PaxDb:O00327 PRIDE:O00327 DNASU:406
Ensembl:ENST00000361003 Ensembl:ENST00000389707
Ensembl:ENST00000396441 Ensembl:ENST00000401424
Ensembl:ENST00000403290 Ensembl:ENST00000403482
Ensembl:ENST00000403510 GeneID:406 KEGG:hsa:406 UCSC:uc001mkp.3
UCSC:uc001mkr.3 UCSC:uc001mks.3 UCSC:uc001mkx.3 UCSC:uc009ygm.1
GeneCards:GC11P013299 HGNC:HGNC:701 MIM:602550 neXtProt:NX_O00327
PharmGKB:PA24996 InParanoid:O00327 GenomeRNAi:406 NextBio:1701
ArrayExpress:O00327 Bgee:O00327 Genevestigator:O00327
GermOnline:ENSG00000133794 Uniprot:O00327
Length = 626
Score = 341 (125.1 bits), Expect = 7.5e-61, Sum P(4) = 7.5e-61
Identities = 63/87 (72%), Positives = 79/87 (90%)
Query: 218 SRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSY 277
+R+ HS+IEKRRRDKMN++I EL+++VP C+AMSRKLDKLTVLRMAVQH+KT+RGA + Y
Sbjct: 73 AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY 132
Query: 278 TEGHYKPAFLTDQELKHLILQAAEGFL 304
TE +YKP FL+D ELKHLIL+AA+GFL
Sbjct: 133 TEANYKPTFLSDDELKHLILRAADGFL 159
Score = 161 (61.7 bits), Expect = 2.5e-34, Sum P(4) = 2.5e-34
Identities = 34/51 (66%), Positives = 40/51 (78%)
Query: 167 AQGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQVIVGLPV 217
+Q +L+GQS FD LHPKD+AKVKEQL SSD +PRERLID K+ GLPV
Sbjct: 183 SQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKT-----GLPV 228
Score = 133 (51.9 bits), Expect = 7.5e-61, Sum P(4) = 7.5e-61
Identities = 20/39 (51%), Positives = 32/39 (82%)
Query: 525 YQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNTLIL 563
Y+FK K G+++ L+S W +F NPWTK++EY++S NT++L
Sbjct: 404 YKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVL 442
Score = 131 (51.2 bits), Expect = 7.5e-61, Sum P(4) = 7.5e-61
Identities = 29/92 (31%), Positives = 51/92 (55%)
Query: 436 PAKMGLEESEDRKYSVIQCTGYLKSWAPAKMXXXXXXXXXXXXXXXXXXXLVAVGRVLAD 495
P+ ++++ + + I TGYLKSW P KM LVA+GR+ +
Sbjct: 266 PSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSC--LVAIGRLHSH 323
Query: 496 KT-RILNKQVNLRPIQFLSRHALDGKFLFVYQ 526
+ +N ++ ++ ++++SRHA+DGKF+FV Q
Sbjct: 324 VVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQ 355
Score = 111 (44.1 bits), Expect = 7.5e-61, Sum P(4) = 7.5e-61
Identities = 24/31 (77%), Positives = 24/31 (77%)
Query: 331 TLLPVKTADIPAEVSRLCPGARRSFFCRMKC 361
T LPVKT DI SRLC GARRSFFCRMKC
Sbjct: 224 TGLPVKT-DITPGPSRLCSGARRSFFCRMKC 253
Score = 110 (43.8 bits), Expect = 1.0e-28, Sum P(4) = 1.0e-28
Identities = 26/56 (46%), Positives = 39/56 (69%)
Query: 282 YKPAFLTDQELKHLILQAAE--GFLQN----HSEIEKRRRDKMNTYITELSAMVPT 331
Y+ + TD++ H L+ E G ++N HS+IEKRRRDKMN++I EL+++VPT
Sbjct: 46 YQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPT 101
Score = 97 (39.2 bits), Expect = 2.6e-57, Sum P(4) = 2.6e-57
Identities = 20/41 (48%), Positives = 27/41 (65%)
Query: 407 ASCHRKKKQQQSDRK-YSVIQCTGYLKSWAPAKMGLEESED 446
++C +KK +DRK + I TGYLKSW P KMGL+E +
Sbjct: 267 STCSKKK----ADRKSFCTIHSTGYLKSWPPTKMGLDEDNE 303
Score = 45 (20.9 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 170 ELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERL 203
ELLG S ++ H D+ + E L RE++
Sbjct: 367 ELLGTSCYEYFHQDDIGHLAE-CHRQVLQTREKI 399
>UNIPROTKB|A0MLS5 [details] [associations]
symbol:ARNTL "Aryl hydrocarbon receptor nuclear
translocator-like protein 1" species:9796 "Equus caballus"
[GO:0005667 "transcription factor complex" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0032922 "circadian regulation of gene expression"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0006355
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 GO:GO:0032922 SMART:SM00086 TIGRFAMs:TIGR00229
eggNOG:NOG293303 HOGENOM:HOG000234379 Gene3D:4.10.280.10
SUPFAM:SSF47459 CTD:406 HOVERGEN:HBG107503 KO:K02296
OrthoDB:EOG4NS3B2 EMBL:DQ988038 RefSeq:NP_001075390.1
UniGene:Eca.2805 ProteinModelPortal:A0MLS5 STRING:A0MLS5
GeneID:100034115 KEGG:ecb:100034115 InParanoid:A0MLS5
Uniprot:A0MLS5
Length = 626
Score = 341 (125.1 bits), Expect = 7.5e-61, Sum P(4) = 7.5e-61
Identities = 63/87 (72%), Positives = 79/87 (90%)
Query: 218 SRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSY 277
+R+ HS+IEKRRRDKMN++I EL+++VP C+AMSRKLDKLTVLRMAVQH+KT+RGA + Y
Sbjct: 73 AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY 132
Query: 278 TEGHYKPAFLTDQELKHLILQAAEGFL 304
TE +YKP FL+D ELKHLIL+AA+GFL
Sbjct: 133 TEANYKPTFLSDDELKHLILRAADGFL 159
Score = 161 (61.7 bits), Expect = 2.5e-34, Sum P(4) = 2.5e-34
Identities = 34/51 (66%), Positives = 40/51 (78%)
Query: 167 AQGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQVIVGLPV 217
+Q +L+GQS FD LHPKD+AKVKEQL SSD +PRERLID K+ GLPV
Sbjct: 183 SQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKT-----GLPV 228
Score = 133 (51.9 bits), Expect = 7.5e-61, Sum P(4) = 7.5e-61
Identities = 20/39 (51%), Positives = 32/39 (82%)
Query: 525 YQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNTLIL 563
Y+FK K G+++ L+S W +F NPWTK++EY++S NT++L
Sbjct: 404 YKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVL 442
Score = 131 (51.2 bits), Expect = 7.5e-61, Sum P(4) = 7.5e-61
Identities = 29/92 (31%), Positives = 51/92 (55%)
Query: 436 PAKMGLEESEDRKYSVIQCTGYLKSWAPAKMXXXXXXXXXXXXXXXXXXXLVAVGRVLAD 495
P+ ++++ + + I TGYLKSW P KM LVA+GR+ +
Sbjct: 266 PSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSC--LVAIGRLHSH 323
Query: 496 KT-RILNKQVNLRPIQFLSRHALDGKFLFVYQ 526
+ +N ++ ++ ++++SRHA+DGKF+FV Q
Sbjct: 324 VVPQPVNGEIRVKSMEYVSRHAIDGKFVFVDQ 355
Score = 111 (44.1 bits), Expect = 7.5e-61, Sum P(4) = 7.5e-61
Identities = 24/31 (77%), Positives = 24/31 (77%)
Query: 331 TLLPVKTADIPAEVSRLCPGARRSFFCRMKC 361
T LPVKT DI SRLC GARRSFFCRMKC
Sbjct: 224 TGLPVKT-DITPGPSRLCSGARRSFFCRMKC 253
Score = 110 (43.8 bits), Expect = 1.0e-28, Sum P(4) = 1.0e-28
Identities = 26/56 (46%), Positives = 39/56 (69%)
Query: 282 YKPAFLTDQELKHLILQAAE--GFLQN----HSEIEKRRRDKMNTYITELSAMVPT 331
Y+ + TD++ H L+ E G ++N HS+IEKRRRDKMN++I EL+++VPT
Sbjct: 46 YQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPT 101
Score = 97 (39.2 bits), Expect = 2.6e-57, Sum P(4) = 2.6e-57
Identities = 20/41 (48%), Positives = 27/41 (65%)
Query: 407 ASCHRKKKQQQSDRK-YSVIQCTGYLKSWAPAKMGLEESED 446
++C +KK +DRK + I TGYLKSW P KMGL+E +
Sbjct: 267 STCSKKK----ADRKSFCTIHSTGYLKSWPPTKMGLDEDNE 303
Score = 45 (20.9 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 170 ELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERL 203
ELLG S ++ H D+ + E L RE++
Sbjct: 367 ELLGTSCYEYFHQDDIGHLAE-CHRQVLQTREKI 399
>UNIPROTKB|O88529 [details] [associations]
symbol:ARNTL "Aryl hydrocarbon receptor nuclear
translocator-like protein 1" species:10036 "Mesocricetus auratus"
[GO:0005667 "transcription factor complex" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0032922 "circadian regulation of gene expression"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0006355
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 GO:GO:0032922 SMART:SM00086 TIGRFAMs:TIGR00229
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOVERGEN:HBG107503 EMBL:AF070917
ProteinModelPortal:O88529 IntAct:O88529 Uniprot:O88529
Length = 626
Score = 341 (125.1 bits), Expect = 9.6e-61, Sum P(4) = 9.6e-61
Identities = 63/87 (72%), Positives = 79/87 (90%)
Query: 218 SRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSY 277
+R+ HS+IEKRRRDKMN++I EL+++VP C+AMSRKLDKLTVLRMAVQH+KT+RGA + Y
Sbjct: 73 AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY 132
Query: 278 TEGHYKPAFLTDQELKHLILQAAEGFL 304
TE +YKP FL+D ELKHLIL+AA+GFL
Sbjct: 133 TEANYKPTFLSDDELKHLILRAADGFL 159
Score = 161 (61.7 bits), Expect = 3.2e-34, Sum P(4) = 3.2e-34
Identities = 34/51 (66%), Positives = 40/51 (78%)
Query: 167 AQGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQVIVGLPV 217
+Q +L+GQS FD LHPKD+AKVKEQL SSD +PRERLID K+ GLPV
Sbjct: 183 SQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKT-----GLPV 228
Score = 133 (51.9 bits), Expect = 9.6e-61, Sum P(4) = 9.6e-61
Identities = 20/39 (51%), Positives = 32/39 (82%)
Query: 525 YQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNTLIL 563
Y+FK K G+++ L+S W +F NPWTK++EY++S NT++L
Sbjct: 404 YKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVL 442
Score = 130 (50.8 bits), Expect = 9.6e-61, Sum P(4) = 9.6e-61
Identities = 31/87 (35%), Positives = 49/87 (56%)
Query: 442 EESEDRK-YSVIQCTGYLKSWAPAKMXXXXXXXXXXXXXXXXXXXLVAVGRVLADKT-RI 499
++ DRK + I TGYLKSW P KM LVA+GR+ + +
Sbjct: 271 KKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSC--LVAIGRLHSHVVPQP 328
Query: 500 LNKQVNLRPIQFLSRHALDGKFLFVYQ 526
+N ++ ++ ++++SRHA+DGKF+FV Q
Sbjct: 329 VNGEIRVKSMEYVSRHAIDGKFVFVDQ 355
Score = 114 (45.2 bits), Expect = 5.1e-29, Sum P(4) = 5.1e-29
Identities = 27/56 (48%), Positives = 40/56 (71%)
Query: 282 YKPAFLTDQELKHLILQAAE--GFLQN----HSEIEKRRRDKMNTYITELSAMVPT 331
Y+ + TD++ H L+ AE G ++N HS+IEKRRRDKMN++I EL+++VPT
Sbjct: 46 YQESMDTDKDDPHGRLEYAEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPT 101
Score = 111 (44.1 bits), Expect = 9.6e-61, Sum P(4) = 9.6e-61
Identities = 24/31 (77%), Positives = 24/31 (77%)
Query: 331 TLLPVKTADIPAEVSRLCPGARRSFFCRMKC 361
T LPVKT DI SRLC GARRSFFCRMKC
Sbjct: 224 TGLPVKT-DITPGPSRLCSGARRSFFCRMKC 253
Score = 101 (40.6 bits), Expect = 9.9e-58, Sum P(4) = 9.9e-58
Identities = 21/42 (50%), Positives = 28/42 (66%)
Query: 406 AASCHRKKKQQQSDRK-YSVIQCTGYLKSWAPAKMGLEESED 446
A++C +KK +DRK + I TGYLKSW P KMGL+E +
Sbjct: 266 ASTCSKKK----ADRKSFCTIHSTGYLKSWPPTKMGLDEDNE 303
Score = 45 (20.9 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 170 ELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERL 203
ELLG S ++ H D+ + E L RE++
Sbjct: 367 ELLGTSCYEYFHQDDIGHLAE-CHRQVLQTREKI 399
>UNIPROTKB|E1BLF5 [details] [associations]
symbol:ARNTL "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051879 "Hsp90 protein binding" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0043425 "bHLH transcription factor binding" evidence=IEA]
[GO:0042176 "regulation of protein catabolic process" evidence=IEA]
[GO:0032922 "circadian regulation of gene expression" evidence=IEA]
[GO:0017162 "aryl hydrocarbon receptor binding" evidence=IEA]
[GO:0016604 "nuclear body" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0001190 "RNA polymerase II transcription factor
binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0000982 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0000060
"protein import into nucleus, translocation" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0007623 GO:GO:0005667 GO:GO:0000060 GO:GO:0004871
GO:GO:0000982 SMART:SM00086 TIGRFAMs:TIGR00229 GO:GO:0001190
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0042176 CTD:406 KO:K02296 OMA:EKINTNC EMBL:DAAA02040648
IPI:IPI00712443 RefSeq:NP_001178099.1 UniGene:Bt.39079 PRIDE:E1BLF5
Ensembl:ENSBTAT00000017323 GeneID:530705 KEGG:bta:530705
NextBio:20875311 Uniprot:E1BLF5
Length = 626
Score = 341 (125.1 bits), Expect = 9.6e-61, Sum P(4) = 9.6e-61
Identities = 63/87 (72%), Positives = 79/87 (90%)
Query: 218 SRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSY 277
+R+ HS+IEKRRRDKMN++I EL+++VP C+AMSRKLDKLTVLRMAVQH+KT+RGA + Y
Sbjct: 73 AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY 132
Query: 278 TEGHYKPAFLTDQELKHLILQAAEGFL 304
TE +YKP FL+D ELKHLIL+AA+GFL
Sbjct: 133 TEANYKPTFLSDDELKHLILRAADGFL 159
Score = 161 (61.7 bits), Expect = 3.2e-34, Sum P(4) = 3.2e-34
Identities = 34/51 (66%), Positives = 40/51 (78%)
Query: 167 AQGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQVIVGLPV 217
+Q +L+GQS FD LHPKD+AKVKEQL SSD +PRERLID K+ GLPV
Sbjct: 183 SQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKT-----GLPV 228
Score = 133 (51.9 bits), Expect = 9.6e-61, Sum P(4) = 9.6e-61
Identities = 20/39 (51%), Positives = 32/39 (82%)
Query: 525 YQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNTLIL 563
Y+FK K G+++ L+S W +F NPWTK++EY++S NT++L
Sbjct: 404 YKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVL 442
Score = 130 (50.8 bits), Expect = 9.6e-61, Sum P(4) = 9.6e-61
Identities = 29/92 (31%), Positives = 50/92 (54%)
Query: 436 PAKMGLEESEDRKYSVIQCTGYLKSWAPAKMXXXXXXXXXXXXXXXXXXXLVAVGRVLAD 495
P+ ++++ + + I TGYLKSW P KM LVA+GR+ +
Sbjct: 266 PSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSC--LVAIGRLHSH 323
Query: 496 KT-RILNKQVNLRPIQFLSRHALDGKFLFVYQ 526
+ N ++ ++ ++++SRHA+DGKF+FV Q
Sbjct: 324 MVPQPANGEIRVKSMEYVSRHAIDGKFVFVDQ 355
Score = 111 (44.1 bits), Expect = 9.6e-61, Sum P(4) = 9.6e-61
Identities = 24/31 (77%), Positives = 24/31 (77%)
Query: 331 TLLPVKTADIPAEVSRLCPGARRSFFCRMKC 361
T LPVKT DI SRLC GARRSFFCRMKC
Sbjct: 224 TGLPVKT-DITPGPSRLCSGARRSFFCRMKC 253
Score = 110 (43.8 bits), Expect = 1.3e-28, Sum P(4) = 1.3e-28
Identities = 26/56 (46%), Positives = 39/56 (69%)
Query: 282 YKPAFLTDQELKHLILQAAE--GFLQN----HSEIEKRRRDKMNTYITELSAMVPT 331
Y+ + TD++ H L+ E G ++N HS+IEKRRRDKMN++I EL+++VPT
Sbjct: 46 YQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPT 101
Score = 97 (39.2 bits), Expect = 2.6e-57, Sum P(4) = 2.6e-57
Identities = 20/41 (48%), Positives = 27/41 (65%)
Query: 407 ASCHRKKKQQQSDRK-YSVIQCTGYLKSWAPAKMGLEESED 446
++C +KK +DRK + I TGYLKSW P KMGL+E +
Sbjct: 267 STCSKKK----ADRKSFCTIHSTGYLKSWPPTKMGLDEDNE 303
Score = 45 (20.9 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 170 ELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERL 203
ELLG S ++ H D+ + E L RE++
Sbjct: 367 ELLGTSCYEYFHQDDIGHLAE-CHRQVLQSREKI 399
>UNIPROTKB|E2R130 [details] [associations]
symbol:ARNTL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AAEX03012928
Ensembl:ENSCAFT00000012969 Uniprot:E2R130
Length = 627
Score = 341 (125.1 bits), Expect = 9.8e-61, Sum P(4) = 9.8e-61
Identities = 63/87 (72%), Positives = 79/87 (90%)
Query: 218 SRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSY 277
+R+ HS+IEKRRRDKMN++I EL+++VP C+AMSRKLDKLTVLRMAVQH+KT+RGA + Y
Sbjct: 73 AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY 132
Query: 278 TEGHYKPAFLTDQELKHLILQAAEGFL 304
TE +YKP FL+D ELKHLIL+AA+GFL
Sbjct: 133 TEANYKPTFLSDDELKHLILRAADGFL 159
Score = 161 (61.7 bits), Expect = 3.2e-34, Sum P(4) = 3.2e-34
Identities = 34/51 (66%), Positives = 40/51 (78%)
Query: 167 AQGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQVIVGLPV 217
+Q +L+GQS FD LHPKD+AKVKEQL SSD +PRERLID K+ GLPV
Sbjct: 183 SQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKT-----GLPV 228
Score = 133 (51.9 bits), Expect = 9.8e-61, Sum P(4) = 9.8e-61
Identities = 20/39 (51%), Positives = 32/39 (82%)
Query: 525 YQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNTLIL 563
Y+FK K G+++ L+S W +F NPWTK++EY++S NT++L
Sbjct: 404 YKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVL 442
Score = 130 (50.8 bits), Expect = 9.8e-61, Sum P(4) = 9.8e-61
Identities = 29/92 (31%), Positives = 50/92 (54%)
Query: 436 PAKMGLEESEDRKYSVIQCTGYLKSWAPAKMXXXXXXXXXXXXXXXXXXXLVAVGRVLAD 495
P+ ++++ + + I TGYLKSW P KM LVA+GR+ +
Sbjct: 266 PSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDSEPDNEGCNLSC--LVAIGRLHSH 323
Query: 496 KT-RILNKQVNLRPIQFLSRHALDGKFLFVYQ 526
+ +N + ++ ++++SRHA+DGKF+FV Q
Sbjct: 324 VVPQPVNGDIRVKSMEYVSRHAIDGKFVFVDQ 355
Score = 111 (44.1 bits), Expect = 9.8e-61, Sum P(4) = 9.8e-61
Identities = 24/31 (77%), Positives = 24/31 (77%)
Query: 331 TLLPVKTADIPAEVSRLCPGARRSFFCRMKC 361
T LPVKT DI SRLC GARRSFFCRMKC
Sbjct: 224 TGLPVKT-DITPGPSRLCSGARRSFFCRMKC 253
Score = 108 (43.1 bits), Expect = 2.1e-28, Sum P(4) = 2.1e-28
Identities = 26/56 (46%), Positives = 38/56 (67%)
Query: 282 YKPAFLTDQELKHLILQAAE--GFLQN----HSEIEKRRRDKMNTYITELSAMVPT 331
Y+ + TD++ H L E G ++N HS+IEKRRRDKMN++I EL+++VPT
Sbjct: 46 YQESMDTDKDDPHGRLDYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPT 101
Score = 97 (39.2 bits), Expect = 2.6e-57, Sum P(4) = 2.6e-57
Identities = 20/41 (48%), Positives = 27/41 (65%)
Query: 407 ASCHRKKKQQQSDRK-YSVIQCTGYLKSWAPAKMGLEESED 446
++C +KK +DRK + I TGYLKSW P KMGL+E +
Sbjct: 267 STCSKKK----ADRKSFCTIHSTGYLKSWPPTKMGLDEDSE 303
Score = 45 (20.9 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 170 ELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERL 203
ELLG S ++ H D+ + E L RE++
Sbjct: 367 ELLGTSCYEYFHQDDIGHLAE-CHRQVLQTREKI 399
>MGI|MGI:1096381 [details] [associations]
symbol:Arntl "aryl hydrocarbon receptor nuclear
translocator-like" species:10090 "Mus musculus" [GO:0000060
"protein import into nucleus, translocation" evidence=IDA]
[GO:0000982 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IC]
[GO:0001190 "RNA polymerase II transcription factor binding
transcription factor activity involved in positive regulation of
transcription" evidence=IDA] [GO:0003677 "DNA binding"
evidence=ISO;IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISA;IDA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005667 "transcription factor complex" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISA;IDA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IDA;IMP] [GO:0008134 "transcription factor binding"
evidence=ISA] [GO:0016604 "nuclear body" evidence=IDA] [GO:0017162
"aryl hydrocarbon receptor binding" evidence=ISO] [GO:0032922
"circadian regulation of gene expression" evidence=IDA] [GO:0042176
"regulation of protein catabolic process" evidence=IDA] [GO:0043425
"bHLH transcription factor binding" evidence=IPI] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IGI;IC;ISO;IDA] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048511 "rhythmic process"
evidence=IEA] [GO:0051879 "Hsp90 protein binding" evidence=ISO]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
MGI:MGI:1096381 GO:GO:0005829 GO:GO:0003677 GO:GO:0005667
GO:GO:0001077 GO:GO:0000060 GO:GO:0004871 GO:GO:0032922
SMART:SM00086 TIGRFAMs:TIGR00229 GO:GO:0001190 eggNOG:NOG293303
GeneTree:ENSGT00650000092935 HOGENOM:HOG000234379
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0008134 GO:GO:0042176
GO:GO:0016604 Reactome:REACT_109335 Reactome:REACT_24972 CTD:406
HOVERGEN:HBG107503 KO:K02296 OMA:EKINTNC OrthoDB:EOG4NS3B2
EMBL:AB012601 EMBL:AB015203 EMBL:AB012602 EMBL:AB014494
EMBL:BC025973 EMBL:BC011080 IPI:IPI00403502 IPI:IPI00462286
IPI:IPI00474434 IPI:IPI00474567 IPI:IPI00875930 PIR:JE0270
RefSeq:NP_001229977.1 RefSeq:NP_031515.1 UniGene:Mm.440371 PDB:4F3L
PDBsum:4F3L ProteinModelPortal:Q9WTL8 SMR:Q9WTL8 DIP:DIP-43977N
IntAct:Q9WTL8 MINT:MINT-1657344 STRING:Q9WTL8 PhosphoSite:Q9WTL8
PaxDb:Q9WTL8 PRIDE:Q9WTL8 Ensembl:ENSMUST00000047321 GeneID:11865
KEGG:mmu:11865 UCSC:uc009jhf.1 UCSC:uc009jhi.1 UCSC:uc009jhj.1
InParanoid:Q9WTL8 NextBio:279875 Bgee:Q9WTL8 Genevestigator:Q9WTL8
GermOnline:ENSMUSG00000055116 Uniprot:Q9WTL8
Length = 632
Score = 341 (125.1 bits), Expect = 1.1e-60, Sum P(4) = 1.1e-60
Identities = 63/87 (72%), Positives = 79/87 (90%)
Query: 218 SRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSY 277
+R+ HS+IEKRRRDKMN++I EL+++VP C+AMSRKLDKLTVLRMAVQH+KT+RGA + Y
Sbjct: 80 AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY 139
Query: 278 TEGHYKPAFLTDQELKHLILQAAEGFL 304
TE +YKP FL+D ELKHLIL+AA+GFL
Sbjct: 140 TEANYKPTFLSDDELKHLILRAADGFL 166
Score = 161 (61.7 bits), Expect = 3.3e-34, Sum P(4) = 3.3e-34
Identities = 34/51 (66%), Positives = 40/51 (78%)
Query: 167 AQGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQVIVGLPV 217
+Q +L+GQS FD LHPKD+AKVKEQL SSD +PRERLID K+ GLPV
Sbjct: 190 SQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKT-----GLPV 235
Score = 133 (51.9 bits), Expect = 1.1e-60, Sum P(4) = 1.1e-60
Identities = 20/39 (51%), Positives = 32/39 (82%)
Query: 525 YQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNTLIL 563
Y+FK K G+++ L+S W +F NPWTK++EY++S NT++L
Sbjct: 410 YKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVL 448
Score = 130 (50.8 bits), Expect = 1.1e-60, Sum P(4) = 1.1e-60
Identities = 31/86 (36%), Positives = 48/86 (55%)
Query: 443 ESEDRK-YSVIQCTGYLKSWAPAKMXXXXXXXXXXXXXXXXXXXLVAVGRVLADKT-RIL 500
+ +DRK + I TGYLKSW P KM LVA+GR+ + +
Sbjct: 278 KKKDRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSC--LVAIGRLHSHMVPQPA 335
Query: 501 NKQVNLRPIQFLSRHALDGKFLFVYQ 526
N ++ ++ ++++SRHA+DGKF+FV Q
Sbjct: 336 NGEIRVKSMEYVSRHAIDGKFVFVDQ 361
Score = 111 (44.1 bits), Expect = 1.1e-60, Sum P(4) = 1.1e-60
Identities = 24/31 (77%), Positives = 24/31 (77%)
Query: 331 TLLPVKTADIPAEVSRLCPGARRSFFCRMKC 361
T LPVKT DI SRLC GARRSFFCRMKC
Sbjct: 231 TGLPVKT-DITPGPSRLCSGARRSFFCRMKC 260
Score = 110 (43.8 bits), Expect = 1.4e-28, Sum P(4) = 1.4e-28
Identities = 26/50 (52%), Positives = 37/50 (74%)
Query: 288 TDQELKHLILQAAE--GFLQN----HSEIEKRRRDKMNTYITELSAMVPT 331
TD++ H L+ AE G ++N HS+IEKRRRDKMN++I EL+++VPT
Sbjct: 59 TDKDDPHGRLEYAEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPT 108
Score = 98 (39.6 bits), Expect = 2.3e-57, Sum P(4) = 2.3e-57
Identities = 21/42 (50%), Positives = 27/42 (64%)
Query: 406 AASCHRKKKQQQSDRK-YSVIQCTGYLKSWAPAKMGLEESED 446
A++C +KK DRK + I TGYLKSW P KMGL+E +
Sbjct: 273 ASTCSKKK-----DRKSFCTIHSTGYLKSWPPTKMGLDEDNE 309
Score = 45 (20.9 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 170 ELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERL 203
ELLG S ++ H D+ + E L RE++
Sbjct: 373 ELLGTSCYEYFHQDDIGHLAE-CHRQVLQTREKI 405
>UNIPROTKB|J9NTT7 [details] [associations]
symbol:ARNTL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 OMA:EKINTNC EMBL:AAEX03012928
Ensembl:ENSCAFT00000044767 Uniprot:J9NTT7
Length = 659
Score = 341 (125.1 bits), Expect = 2.0e-60, Sum P(4) = 2.0e-60
Identities = 63/87 (72%), Positives = 79/87 (90%)
Query: 218 SRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSY 277
+R+ HS+IEKRRRDKMN++I EL+++VP C+AMSRKLDKLTVLRMAVQH+KT+RGA + Y
Sbjct: 105 AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY 164
Query: 278 TEGHYKPAFLTDQELKHLILQAAEGFL 304
TE +YKP FL+D ELKHLIL+AA+GFL
Sbjct: 165 TEANYKPTFLSDDELKHLILRAADGFL 191
Score = 161 (61.7 bits), Expect = 4.3e-34, Sum P(4) = 4.3e-34
Identities = 34/51 (66%), Positives = 40/51 (78%)
Query: 167 AQGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQVIVGLPV 217
+Q +L+GQS FD LHPKD+AKVKEQL SSD +PRERLID K+ GLPV
Sbjct: 215 SQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKT-----GLPV 260
Score = 133 (51.9 bits), Expect = 2.0e-60, Sum P(4) = 2.0e-60
Identities = 20/39 (51%), Positives = 32/39 (82%)
Query: 525 YQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNTLIL 563
Y+FK K G+++ L+S W +F NPWTK++EY++S NT++L
Sbjct: 436 YKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVL 474
Score = 130 (50.8 bits), Expect = 2.0e-60, Sum P(4) = 2.0e-60
Identities = 29/92 (31%), Positives = 50/92 (54%)
Query: 436 PAKMGLEESEDRKYSVIQCTGYLKSWAPAKMXXXXXXXXXXXXXXXXXXXLVAVGRVLAD 495
P+ ++++ + + I TGYLKSW P KM LVA+GR+ +
Sbjct: 298 PSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDSEPDNEGCNLSC--LVAIGRLHSH 355
Query: 496 KT-RILNKQVNLRPIQFLSRHALDGKFLFVYQ 526
+ +N + ++ ++++SRHA+DGKF+FV Q
Sbjct: 356 VVPQPVNGDIRVKSMEYVSRHAIDGKFVFVDQ 387
Score = 111 (44.1 bits), Expect = 2.0e-60, Sum P(4) = 2.0e-60
Identities = 24/31 (77%), Positives = 24/31 (77%)
Query: 331 TLLPVKTADIPAEVSRLCPGARRSFFCRMKC 361
T LPVKT DI SRLC GARRSFFCRMKC
Sbjct: 256 TGLPVKT-DITPGPSRLCSGARRSFFCRMKC 285
Score = 104 (41.7 bits), Expect = 7.2e-28, Sum P(4) = 7.2e-28
Identities = 25/50 (50%), Positives = 35/50 (70%)
Query: 288 TDQELKHLILQAAE--GFLQN----HSEIEKRRRDKMNTYITELSAMVPT 331
TD++ H L E G ++N HS+IEKRRRDKMN++I EL+++VPT
Sbjct: 84 TDKDDPHGRLDYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPT 133
Score = 97 (39.2 bits), Expect = 5.3e-57, Sum P(4) = 5.3e-57
Identities = 20/41 (48%), Positives = 27/41 (65%)
Query: 407 ASCHRKKKQQQSDRK-YSVIQCTGYLKSWAPAKMGLEESED 446
++C +KK +DRK + I TGYLKSW P KMGL+E +
Sbjct: 299 STCSKKK----ADRKSFCTIHSTGYLKSWPPTKMGLDEDSE 335
Score = 45 (20.9 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 170 ELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERL 203
ELLG S ++ H D+ + E L RE++
Sbjct: 399 ELLGTSCYEYFHQDDIGHLAE-CHRQVLQTREKI 431
>UNIPROTKB|Q91YA9 [details] [associations]
symbol:Arntl "Aryl hydrocarbon receptor nuclear
translocator-like protein 1" species:1026970 "Nannospalax galili"
[GO:0005667 "transcription factor complex" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0032922 "circadian regulation of gene expression"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 EMBL:AJ318060 GO:GO:0005737
GO:GO:0006355 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0005667 GO:GO:0004871 GO:GO:0032922 SMART:SM00086
TIGRFAMs:TIGR00229 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
HOVERGEN:HBG107503 ProteinModelPortal:Q91YA9 Uniprot:Q91YA9
Length = 626
Score = 341 (125.1 bits), Expect = 6.5e-60, Sum P(4) = 6.5e-60
Identities = 63/87 (72%), Positives = 79/87 (90%)
Query: 218 SRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSY 277
+R+ HS+IEKRRRDKMN++I EL+++VP C+AMSRKLDKLTVLRMAVQH+KT+RGA + Y
Sbjct: 73 AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY 132
Query: 278 TEGHYKPAFLTDQELKHLILQAAEGFL 304
TE +YKP FL+D ELKHLIL+AA+GFL
Sbjct: 133 TEANYKPTFLSDDELKHLILRAADGFL 159
Score = 161 (61.7 bits), Expect = 2.1e-33, Sum P(4) = 2.1e-33
Identities = 34/51 (66%), Positives = 40/51 (78%)
Query: 167 AQGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQVIVGLPV 217
+Q +L+GQS FD LHPKD+AKVKEQL SSD +PRERLID K+ GLPV
Sbjct: 183 SQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKT-----GLPV 228
Score = 133 (51.9 bits), Expect = 6.5e-60, Sum P(4) = 6.5e-60
Identities = 20/39 (51%), Positives = 32/39 (82%)
Query: 525 YQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNTLIL 563
Y+FK K G+++ L+S W +F NPWTK++EY++S NT++L
Sbjct: 404 YKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVL 442
Score = 122 (48.0 bits), Expect = 6.5e-60, Sum P(4) = 6.5e-60
Identities = 28/92 (30%), Positives = 47/92 (51%)
Query: 436 PAKMGLEESEDRKYSVIQCTGYLKSWAPAKMXXXXXXXXXXXXXXXXXXXLVAVGRVLAD 495
P+ ++++ + + I TGYLKSW P KM LVA+GR+ +
Sbjct: 266 PSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEADSEGCNLSC--LVAIGRLHSH 323
Query: 496 KT-RILNKQVNLRPIQFLSRHALDGKFLFVYQ 526
+ + ++ +++SRHA+DGKF+FV Q
Sbjct: 324 VVPQPAGGDIKVKSTEYVSRHAIDGKFVFVDQ 355
Score = 111 (44.1 bits), Expect = 6.5e-60, Sum P(4) = 6.5e-60
Identities = 24/31 (77%), Positives = 24/31 (77%)
Query: 331 TLLPVKTADIPAEVSRLCPGARRSFFCRMKC 361
T LPVKT DI SRLC GARRSFFCRMKC
Sbjct: 224 TGLPVKT-DITPGPSRLCSGARRSFFCRMKC 253
Score = 110 (43.8 bits), Expect = 8.7e-28, Sum P(4) = 8.7e-28
Identities = 26/56 (46%), Positives = 39/56 (69%)
Query: 282 YKPAFLTDQELKHLILQAAE--GFLQN----HSEIEKRRRDKMNTYITELSAMVPT 331
Y+ + TD++ H L+ E G ++N HS+IEKRRRDKMN++I EL+++VPT
Sbjct: 46 YQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPT 101
Score = 97 (39.2 bits), Expect = 2.6e-57, Sum P(4) = 2.6e-57
Identities = 20/41 (48%), Positives = 27/41 (65%)
Query: 407 ASCHRKKKQQQSDRK-YSVIQCTGYLKSWAPAKMGLEESED 446
++C +KK +DRK + I TGYLKSW P KMGL+E +
Sbjct: 267 STCSKKK----ADRKSFCTIHSTGYLKSWPPTKMGLDEDNE 303
Score = 45 (20.9 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 170 ELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERL 203
ELLG S ++ H D+ + E L RE++
Sbjct: 367 ELLGTSCYEYFHQDDIGHLAE-CHRQVLQTREKI 399
>RGD|62003 [details] [associations]
symbol:Arntl "aryl hydrocarbon receptor nuclear translocator-like"
species:10116 "Rattus norvegicus" [GO:0000060 "protein import into
nucleus, translocation" evidence=ISO] [GO:0000982 "RNA polymerase II
core promoter proximal region sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0001190 "RNA
polymerase II transcription factor binding transcription factor
activity involved in positive regulation of transcription"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA;ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISO] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
"transcription factor complex" evidence=IEA;ISO;ISS] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO;ISS] [GO:0007623 "circadian rhythm"
evidence=IEP;ISO] [GO:0016604 "nuclear body" evidence=ISO]
[GO:0017162 "aryl hydrocarbon receptor binding" evidence=ISO]
[GO:0032922 "circadian regulation of gene expression"
evidence=ISO;ISS] [GO:0042176 "regulation of protein catabolic
process" evidence=ISO] [GO:0042752 "regulation of circadian rhythm"
evidence=NAS] [GO:0043425 "bHLH transcription factor binding"
evidence=ISO] [GO:0045944 "positive regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0051879 "Hsp90 protein
binding" evidence=ISO] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 RGD:62003 GO:GO:0005737
GO:GO:0006355 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0042752 GO:GO:0005667 GO:GO:0004871 GO:GO:0032922
SMART:SM00086 TIGRFAMs:TIGR00229 eggNOG:NOG293303
GeneTree:ENSGT00650000092935 HOGENOM:HOG000234379 Gene3D:4.10.280.10
SUPFAM:SSF47459 CTD:406 HOVERGEN:HBG107503 KO:K02296 EMBL:AB012600
EMBL:AF015953 EMBL:AF317669 EMBL:BC099833 IPI:IPI00339130
IPI:IPI00339131 IPI:IPI00339132 RefSeq:NP_077338.2 UniGene:Rn.14532
ProteinModelPortal:Q9EPW1 STRING:Q9EPW1 PhosphoSite:Q9EPW1
Ensembl:ENSRNOT00000019645 GeneID:29657 KEGG:rno:29657
UCSC:RGD:62003 NextBio:609947 ArrayExpress:Q9EPW1
Genevestigator:Q9EPW1 GermOnline:ENSRNOG00000014448 Uniprot:Q9EPW1
Length = 626
Score = 333 (122.3 bits), Expect = 3.1e-58, Sum P(4) = 3.1e-58
Identities = 62/87 (71%), Positives = 78/87 (89%)
Query: 218 SRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSY 277
+R+ HS+IEKRRRDKMN++I EL+++VP C+AMSRKLDKLTVLRMAVQH+KT+RGA + Y
Sbjct: 73 AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY 132
Query: 278 TEGHYKPAFLTDQELKHLILQAAEGFL 304
TE +YKP L+D ELKHLIL+AA+GFL
Sbjct: 133 TEANYKPTSLSDDELKHLILRAADGFL 159
Score = 161 (61.7 bits), Expect = 2.0e-34, Sum P(4) = 2.0e-34
Identities = 34/51 (66%), Positives = 40/51 (78%)
Query: 167 AQGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQVIVGLPV 217
+Q +L+GQS FD LHPKD+AKVKEQL SSD +PRERLID K+ GLPV
Sbjct: 183 SQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKT-----GLPV 228
Score = 133 (51.9 bits), Expect = 3.1e-58, Sum P(4) = 3.1e-58
Identities = 20/39 (51%), Positives = 32/39 (82%)
Query: 525 YQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNTLIL 563
Y+FK K G+++ L+S W +F NPWTK++EY++S NT++L
Sbjct: 404 YKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVL 442
Score = 132 (51.5 bits), Expect = 3.1e-58, Sum P(4) = 3.1e-58
Identities = 31/87 (35%), Positives = 49/87 (56%)
Query: 442 EESEDRK-YSVIQCTGYLKSWAPAKMXXXXXXXXXXXXXXXXXXXLVAVGRVLADKT-RI 499
++ DRK + I TGYLKSW P KM LVA+GR+ + +
Sbjct: 271 KKKADRKSFCTIHSTGYLKSWPPTKMGLDEDSEPDNEGCNLSC--LVAIGRLHSHMVPQP 328
Query: 500 LNKQVNLRPIQFLSRHALDGKFLFVYQ 526
+N ++ ++ ++++SRHA+DGKF+FV Q
Sbjct: 329 VNGEIRVKSMEYVSRHAIDGKFVFVDQ 355
Score = 114 (45.2 bits), Expect = 3.2e-29, Sum P(4) = 3.2e-29
Identities = 27/56 (48%), Positives = 40/56 (71%)
Query: 282 YKPAFLTDQELKHLILQAAE--GFLQN----HSEIEKRRRDKMNTYITELSAMVPT 331
Y+ + TD++ H L+ AE G ++N HS+IEKRRRDKMN++I EL+++VPT
Sbjct: 46 YQESMDTDKDDPHGRLEYAEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPT 101
Score = 111 (44.1 bits), Expect = 3.1e-58, Sum P(4) = 3.1e-58
Identities = 24/31 (77%), Positives = 24/31 (77%)
Query: 331 TLLPVKTADIPAEVSRLCPGARRSFFCRMKC 361
T LPVKT DI SRLC GARRSFFCRMKC
Sbjct: 224 TGLPVKT-DITPGPSRLCSGARRSFFCRMKC 253
Score = 101 (40.6 bits), Expect = 5.2e-55, Sum P(4) = 5.2e-55
Identities = 21/42 (50%), Positives = 28/42 (66%)
Query: 406 AASCHRKKKQQQSDRK-YSVIQCTGYLKSWAPAKMGLEESED 446
A++C +KK +DRK + I TGYLKSW P KMGL+E +
Sbjct: 266 ASTCSKKK----ADRKSFCTIHSTGYLKSWPPTKMGLDEDSE 303
Score = 45 (20.9 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 170 ELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERL 203
ELLG S ++ H D+ + E L RE++
Sbjct: 367 ELLGTSCYEYFHQDDIGHLAE-CHRQVLQTREKI 399
>UNIPROTKB|Q9EPW1 [details] [associations]
symbol:Arntl "Aryl hydrocarbon receptor nuclear
translocator-like protein 1" species:10116 "Rattus norvegicus"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 RGD:62003
GO:GO:0005737 GO:GO:0006355 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0042752 GO:GO:0005667 GO:GO:0004871
GO:GO:0032922 SMART:SM00086 TIGRFAMs:TIGR00229 eggNOG:NOG293303
GeneTree:ENSGT00650000092935 HOGENOM:HOG000234379
Gene3D:4.10.280.10 SUPFAM:SSF47459 CTD:406 HOVERGEN:HBG107503
KO:K02296 EMBL:AB012600 EMBL:AF015953 EMBL:AF317669 EMBL:BC099833
IPI:IPI00339130 IPI:IPI00339131 IPI:IPI00339132 RefSeq:NP_077338.2
UniGene:Rn.14532 ProteinModelPortal:Q9EPW1 STRING:Q9EPW1
PhosphoSite:Q9EPW1 Ensembl:ENSRNOT00000019645 GeneID:29657
KEGG:rno:29657 UCSC:RGD:62003 NextBio:609947 ArrayExpress:Q9EPW1
Genevestigator:Q9EPW1 GermOnline:ENSRNOG00000014448 Uniprot:Q9EPW1
Length = 626
Score = 333 (122.3 bits), Expect = 3.1e-58, Sum P(4) = 3.1e-58
Identities = 62/87 (71%), Positives = 78/87 (89%)
Query: 218 SRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSY 277
+R+ HS+IEKRRRDKMN++I EL+++VP C+AMSRKLDKLTVLRMAVQH+KT+RGA + Y
Sbjct: 73 AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY 132
Query: 278 TEGHYKPAFLTDQELKHLILQAAEGFL 304
TE +YKP L+D ELKHLIL+AA+GFL
Sbjct: 133 TEANYKPTSLSDDELKHLILRAADGFL 159
Score = 161 (61.7 bits), Expect = 2.0e-34, Sum P(4) = 2.0e-34
Identities = 34/51 (66%), Positives = 40/51 (78%)
Query: 167 AQGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQVIVGLPV 217
+Q +L+GQS FD LHPKD+AKVKEQL SSD +PRERLID K+ GLPV
Sbjct: 183 SQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKT-----GLPV 228
Score = 133 (51.9 bits), Expect = 3.1e-58, Sum P(4) = 3.1e-58
Identities = 20/39 (51%), Positives = 32/39 (82%)
Query: 525 YQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNTLIL 563
Y+FK K G+++ L+S W +F NPWTK++EY++S NT++L
Sbjct: 404 YKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVL 442
Score = 132 (51.5 bits), Expect = 3.1e-58, Sum P(4) = 3.1e-58
Identities = 31/87 (35%), Positives = 49/87 (56%)
Query: 442 EESEDRK-YSVIQCTGYLKSWAPAKMXXXXXXXXXXXXXXXXXXXLVAVGRVLADKT-RI 499
++ DRK + I TGYLKSW P KM LVA+GR+ + +
Sbjct: 271 KKKADRKSFCTIHSTGYLKSWPPTKMGLDEDSEPDNEGCNLSC--LVAIGRLHSHMVPQP 328
Query: 500 LNKQVNLRPIQFLSRHALDGKFLFVYQ 526
+N ++ ++ ++++SRHA+DGKF+FV Q
Sbjct: 329 VNGEIRVKSMEYVSRHAIDGKFVFVDQ 355
Score = 114 (45.2 bits), Expect = 3.2e-29, Sum P(4) = 3.2e-29
Identities = 27/56 (48%), Positives = 40/56 (71%)
Query: 282 YKPAFLTDQELKHLILQAAE--GFLQN----HSEIEKRRRDKMNTYITELSAMVPT 331
Y+ + TD++ H L+ AE G ++N HS+IEKRRRDKMN++I EL+++VPT
Sbjct: 46 YQESMDTDKDDPHGRLEYAEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPT 101
Score = 111 (44.1 bits), Expect = 3.1e-58, Sum P(4) = 3.1e-58
Identities = 24/31 (77%), Positives = 24/31 (77%)
Query: 331 TLLPVKTADIPAEVSRLCPGARRSFFCRMKC 361
T LPVKT DI SRLC GARRSFFCRMKC
Sbjct: 224 TGLPVKT-DITPGPSRLCSGARRSFFCRMKC 253
Score = 101 (40.6 bits), Expect = 5.2e-55, Sum P(4) = 5.2e-55
Identities = 21/42 (50%), Positives = 28/42 (66%)
Query: 406 AASCHRKKKQQQSDRK-YSVIQCTGYLKSWAPAKMGLEESED 446
A++C +KK +DRK + I TGYLKSW P KMGL+E +
Sbjct: 266 ASTCSKKK----ADRKSFCTIHSTGYLKSWPPTKMGLDEDSE 303
Score = 45 (20.9 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 170 ELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERL 203
ELLG S ++ H D+ + E L RE++
Sbjct: 367 ELLGTSCYEYFHQDDIGHLAE-CHRQVLQTREKI 399
>ZFIN|ZDB-GENE-000509-1 [details] [associations]
symbol:arntl1a "aryl hydrocarbon receptor nuclear
translocator-like 1a" species:7955 "Danio rerio" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=NAS] [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IGI;IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0009648 "photoperiodism" evidence=IEP]
[GO:0007623 "circadian rhythm" evidence=IGI] [GO:0009416 "response
to light stimulus" evidence=IGI] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 ZFIN:ZDB-GENE-000509-1
GO:GO:0005737 GO:GO:0045892 GO:GO:0045893 GO:GO:0003677
GO:GO:0007623 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 HOVERGEN:HBG107503 KO:K02296 OMA:EKINTNC GO:GO:0009648
EMBL:CR759966 EMBL:AF144689 EMBL:AF144690 IPI:IPI00490446
RefSeq:NP_571652.1 UniGene:Dr.75458 DIP:DIP-46453N STRING:Q9I879
Ensembl:ENSDART00000023959 Ensembl:ENSDART00000148660 GeneID:58098
KEGG:dre:58098 CTD:58098 InParanoid:Q9I879 NextBio:20892352
Uniprot:Q9I879
Length = 626
Score = 345 (126.5 bits), Expect = 4.4e-54, Sum P(3) = 4.4e-54
Identities = 64/87 (73%), Positives = 80/87 (91%)
Query: 218 SRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSY 277
+R+ HS+IEKRRRDKMN++I EL+++VP C+AMSRKLDKLTVLRMAVQH+KT+RGA + Y
Sbjct: 77 AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY 136
Query: 278 TEGHYKPAFLTDQELKHLILQAAEGFL 304
TE +YKPAFL+D ELKHLIL+AA+GFL
Sbjct: 137 TEANYKPAFLSDDELKHLILRAADGFL 163
Score = 160 (61.4 bits), Expect = 1.5e-26, Sum P(3) = 1.5e-26
Identities = 34/50 (68%), Positives = 39/50 (78%)
Query: 168 QGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQVIVGLPV 217
Q +L+GQS FD LHPKD+AKVKEQL SSD +PRERLID K+ GLPV
Sbjct: 188 QNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKT-----GLPV 232
Score = 133 (51.9 bits), Expect = 4.4e-54, Sum P(3) = 4.4e-54
Identities = 30/92 (32%), Positives = 49/92 (53%)
Query: 436 PAKMGLEESEDRKYSVIQCTGYLKSWAPAKMXXXXXXXXXXXXXXXXXXXLVAVGRVLAD 495
P+ ++++ + + I TGYLKSW P KM LVA+GR+
Sbjct: 270 PSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSC--LVAIGRLHPH 327
Query: 496 KT-RILNKQVNLRPIQFLSRHALDGKFLFVYQ 526
+ +N + ++P +++SRHA+DGKF+FV Q
Sbjct: 328 IVPQPMNGDIRVKPTEYVSRHAIDGKFVFVDQ 359
Score = 129 (50.5 bits), Expect = 4.4e-54, Sum P(3) = 4.4e-54
Identities = 19/38 (50%), Positives = 31/38 (81%)
Query: 525 YQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNTLI 562
Y+FK K G+++ L+S W +F NPWTK++EY++S NT++
Sbjct: 408 YKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVV 445
Score = 116 (45.9 bits), Expect = 9.8e-22, Sum P(3) = 9.8e-22
Identities = 42/110 (38%), Positives = 52/110 (47%)
Query: 256 KLTVLRMAVQHLKTI---RGAVHSYTEGHYKPAFLTDQELKHLILQAAEGFLQNHSEIE- 311
K +LR A L + RG + +E YK T +L I Q+ +L +
Sbjct: 152 KHLILRAADGFLFVVGCDRGKILFVSESVYKILNYTQNDL---IGQSLFDYLHPKDIAKV 208
Query: 312 KRRRDKMNTYITELSAMVPTLLPVKTADIPAEVSRLCPGARRSFFCRMKC 361
K + +T E T LPVKT DI SRLC GARRSFFCRMKC
Sbjct: 209 KEQLSSSDTAPRERLIDAKTGLPVKT-DITPGPSRLCSGARRSFFCRMKC 257
Score = 104 (41.7 bits), Expect = 1.7e-20, Sum P(3) = 1.7e-20
Identities = 24/48 (50%), Positives = 35/48 (72%)
Query: 288 TDQELKHLILQAAEGFLQN----HSEIEKRRRDKMNTYITELSAMVPT 331
TD++ K L +G ++N HS+IEKRRRDKMN++I EL+++VPT
Sbjct: 59 TDKD-KTLGRDEQQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPT 105
Score = 97 (39.2 bits), Expect = 2.5e-50, Sum P(3) = 2.5e-50
Identities = 20/41 (48%), Positives = 27/41 (65%)
Query: 407 ASCHRKKKQQQSDRK-YSVIQCTGYLKSWAPAKMGLEESED 446
++C +KK +DRK + I TGYLKSW P KMGL+E +
Sbjct: 271 STCSKKK----ADRKSFCTIHSTGYLKSWPPTKMGLDEDNE 307
Score = 47 (21.6 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 170 ELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERL 203
ELLG S+++ H D+ + E L RE++
Sbjct: 371 ELLGTSFYEYFHQDDIGHLAE-CHRQVLQMREKI 403
>ZFIN|ZDB-GENE-030408-1 [details] [associations]
symbol:arntl1b "aryl hydrocarbon receptor nuclear
translocator-like 1b" species:7955 "Danio rerio" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA;IPI] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0009648 "photoperiodism" evidence=IEP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 ZFIN:ZDB-GENE-030408-1
GO:GO:0005737 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0005667 GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0009648 EMBL:CR318647 IPI:IPI00859492
Ensembl:ENSDART00000098259 OMA:REKINTH Uniprot:E7F4H0
Length = 646
Score = 345 (126.5 bits), Expect = 7.9e-54, Sum P(3) = 7.9e-54
Identities = 64/87 (73%), Positives = 80/87 (91%)
Query: 218 SRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSY 277
+R+ HS+IEKRRRDKMN++I EL+++VP C+AMSRKLDKLTVLRMAVQH+KT+RGA + Y
Sbjct: 99 AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGAANPY 158
Query: 278 TEGHYKPAFLTDQELKHLILQAAEGFL 304
TE +YKPAFL+D ELKHLIL+AA+GFL
Sbjct: 159 TEANYKPAFLSDDELKHLILKAADGFL 185
Score = 161 (61.7 bits), Expect = 1.7e-26, Sum P(3) = 1.7e-26
Identities = 34/51 (66%), Positives = 40/51 (78%)
Query: 167 AQGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQVIVGLPV 217
+Q +L+GQS FD LHPKD+AKVKEQL SSD +PRERLID K+ GLPV
Sbjct: 209 SQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKT-----GLPV 254
Score = 132 (51.5 bits), Expect = 7.9e-54, Sum P(3) = 7.9e-54
Identities = 30/92 (32%), Positives = 49/92 (53%)
Query: 436 PAKMGLEESEDRKYSVIQCTGYLKSWAPAKMXXXXXXXXXXXXXXXXXXXLVAVGRVLAD 495
P+ ++++ + + I TGYLKSW P KM LVA+GR+
Sbjct: 292 PSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSC--LVAIGRLHPH 349
Query: 496 KT-RILNKQVNLRPIQFLSRHALDGKFLFVYQ 526
+ +N + ++P +++SRHA+DGKF+FV Q
Sbjct: 350 IVPQPVNGDIRVKPTEYVSRHAIDGKFVFVDQ 381
Score = 129 (50.5 bits), Expect = 7.9e-54, Sum P(3) = 7.9e-54
Identities = 19/38 (50%), Positives = 31/38 (81%)
Query: 525 YQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNTLI 562
Y+FK K G+++ L+S W +F NPWTK++EY++S NT++
Sbjct: 430 YKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVV 467
Score = 114 (45.2 bits), Expect = 2.3e-21, Sum P(3) = 2.3e-21
Identities = 35/95 (36%), Positives = 46/95 (48%)
Query: 271 RGAVHSYTEGHYKPAFLTDQELKHLILQAAEGFLQNHSEIE-KRRRDKMNTYITELSAMV 329
RG + +E YK + + LI Q+ +L + K + +T E
Sbjct: 192 RGKILFVSESVYK---ILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDA 248
Query: 330 PTLLPVKTADIPAEVSRLCPGARRSFFCRMKCKHT 364
T LPV+T DI SRLC GARRSFFCRMKC +
Sbjct: 249 KTGLPVRT-DIAPSPSRLCSGARRSFFCRMKCNRS 282
Score = 101 (40.6 bits), Expect = 5.1e-20, Sum P(3) = 5.1e-20
Identities = 18/25 (72%), Positives = 24/25 (96%)
Query: 307 HSEIEKRRRDKMNTYITELSAMVPT 331
HS+IEKRRRDKMN++I EL+++VPT
Sbjct: 103 HSQIEKRRRDKMNSFIDELASLVPT 127
Score = 97 (39.2 bits), Expect = 3.6e-50, Sum P(3) = 3.6e-50
Identities = 20/41 (48%), Positives = 27/41 (65%)
Query: 407 ASCHRKKKQQQSDRK-YSVIQCTGYLKSWAPAKMGLEESED 446
++C +KK +DRK + I TGYLKSW P KMGL+E +
Sbjct: 293 STCSKKK----ADRKSFCTIHSTGYLKSWPPTKMGLDEDNE 329
Score = 47 (21.6 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 170 ELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERL 203
ELLG S+++ H D+ + E L RE++
Sbjct: 393 ELLGTSFYEYFHQDDIGHLAE-CHRQVLQMREKI 425
>UNIPROTKB|Q5R4T2 [details] [associations]
symbol:ARNTL "Aryl hydrocarbon receptor nuclear
translocator-like protein 1" species:9601 "Pongo abelii"
[GO:0005667 "transcription factor complex" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0032922 "circadian regulation of gene expression"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0006355
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 GO:GO:0032922 SMART:SM00086 TIGRFAMs:TIGR00229
Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956 CTD:406
HOVERGEN:HBG107503 KO:K02296 EMBL:CR861161 RefSeq:NP_001126900.1
UniGene:Pab.3880 ProteinModelPortal:Q5R4T2 GeneID:100173916
KEGG:pon:100173916 Uniprot:Q5R4T2
Length = 625
Score = 341 (125.1 bits), Expect = 1.5e-51, Sum P(3) = 1.5e-51
Identities = 63/87 (72%), Positives = 79/87 (90%)
Query: 218 SRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSY 277
+R+ HS+IEKRRRDKMN++I EL+++VP C+AMSRKLDKLTVLRMAVQH+KT+RGA + Y
Sbjct: 73 AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY 132
Query: 278 TEGHYKPAFLTDQELKHLILQAAEGFL 304
TE +YKP FL+D ELKHLIL+AA+GFL
Sbjct: 133 TEANYKPTFLSDDELKHLILRAADGFL 159
Score = 161 (61.7 bits), Expect = 7.1e-27, Sum P(3) = 7.1e-27
Identities = 34/51 (66%), Positives = 40/51 (78%)
Query: 167 AQGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQVIVGLPV 217
+Q +L+GQS FD LHPKD+AKVKEQL SSD +PRERLID K+ GLPV
Sbjct: 183 SQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKT-----GLPV 228
Score = 133 (51.9 bits), Expect = 1.5e-51, Sum P(3) = 1.5e-51
Identities = 20/39 (51%), Positives = 32/39 (82%)
Query: 525 YQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNTLIL 563
Y+FK K G+++ L+S W +F NPWTK++EY++S NT++L
Sbjct: 403 YKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVL 441
Score = 131 (51.2 bits), Expect = 1.5e-51, Sum P(3) = 1.5e-51
Identities = 31/86 (36%), Positives = 49/86 (56%)
Query: 443 ESEDRK-YSVIQCTGYLKSWAPAKMXXXXXXXXXXXXXXXXXXXLVAVGRVLADKT-RIL 500
+ +DRK + I TGYLKSW P KM LVA+GR+ + + +
Sbjct: 271 KKKDRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSC--LVAIGRLHSHVVPQPV 328
Query: 501 NKQVNLRPIQFLSRHALDGKFLFVYQ 526
N ++ ++ ++++SRHA+DGKF+FV Q
Sbjct: 329 NGEIRVKSMEYVSRHAIDGKFVFVDQ 354
Score = 112 (44.5 bits), Expect = 1.6e-21, Sum P(3) = 1.6e-21
Identities = 40/110 (36%), Positives = 52/110 (47%)
Query: 256 KLTVLRMAVQHLKTI---RGAVHSYTEGHYKPAFLTDQELKHLILQAAEGFLQNHSEIE- 311
K +LR A L + RG + +E +K + + LI Q+ +L +
Sbjct: 148 KHLILRAADGFLFVVGCDRGKILFVSESAFK---ILNYSQNDLIGQSLFDYLHPKDIAKV 204
Query: 312 KRRRDKMNTYITELSAMVPTLLPVKTADIPAEVSRLCPGARRSFFCRMKC 361
K + +T E T LPVKT DI SRLC GARRSFFCRMKC
Sbjct: 205 KEQLSSSDTAPRERLIDAKTGLPVKT-DITPGPSRLCSGARRSFFCRMKC 253
Score = 110 (43.8 bits), Expect = 2.5e-21, Sum P(3) = 2.5e-21
Identities = 26/56 (46%), Positives = 39/56 (69%)
Query: 282 YKPAFLTDQELKHLILQAAE--GFLQN----HSEIEKRRRDKMNTYITELSAMVPT 331
Y+ + TD++ H L+ E G ++N HS+IEKRRRDKMN++I EL+++VPT
Sbjct: 46 YQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPT 101
Score = 94 (38.1 bits), Expect = 1.1e-47, Sum P(3) = 1.1e-47
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 407 ASCHRKKKQQQSDRK-YSVIQCTGYLKSWAPAKMGLEESED 446
++C +KK DRK + I TGYLKSW P KMGL+E +
Sbjct: 267 STCSKKK-----DRKSFCTIHSTGYLKSWPPTKMGLDEDNE 302
Score = 45 (20.9 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 170 ELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERL 203
ELLG S ++ H D+ + E L RE++
Sbjct: 366 ELLGTSCYEYFHQDDIGHLAE-CHRQVLQTREKI 398
>UNIPROTKB|Q8QGQ7 [details] [associations]
symbol:ARNTL2 "Aryl hydrocarbon receptor nuclear
translocator-like protein 2" species:9031 "Gallus gallus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0048511 "rhythmic process" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005737 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0048511 GO:GO:0005667 GO:GO:0004871 SMART:SM00086
TIGRFAMs:TIGR00229 HOGENOM:HOG000234379 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P27540 HOVERGEN:HBG107503 EMBL:AF246958
IPI:IPI00819869 RefSeq:NP_989464.1 UniGene:Gga.2818
ProteinModelPortal:Q8QGQ7 GeneID:373925 KEGG:gga:373925 CTD:56938
eggNOG:NOG288887 KO:K09099 NextBio:20813457 Uniprot:Q8QGQ7
Length = 622
Score = 310 (114.2 bits), Expect = 1.1e-49, Sum P(4) = 1.1e-49
Identities = 59/86 (68%), Positives = 72/86 (83%)
Query: 219 RQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSYT 278
R+ HS+ EKRRRDKMN I ELSAM+P C+ M+RKLDKLTVLRMAVQHLK+++G+ SYT
Sbjct: 94 REAHSQTEKRRRDKMNNLIEELSAMIPQCNPMARKLDKLTVLRMAVQHLKSLKGSTSSYT 153
Query: 279 EGHYKPAFLTDQELKHLILQAAEGFL 304
E YKP+FL D EL+ LIL+AA+GFL
Sbjct: 154 EVRYKPSFLKDDELRQLILRAADGFL 179
Score = 152 (58.6 bits), Expect = 2.7e-29, Sum P(4) = 2.7e-29
Identities = 32/49 (65%), Positives = 38/49 (77%)
Query: 160 CAISDLSAQGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKS 208
C I + Q L+GQS FD LHPKDVAKVKEQL SSD+SPRE+L+D K+
Sbjct: 197 CKILNYD-QTSLIGQSLFDYLHPKDVAKVKEQLSSSDVSPREKLVDGKT 244
Score = 133 (51.9 bits), Expect = 1.1e-49, Sum P(4) = 1.1e-49
Identities = 19/39 (48%), Positives = 33/39 (84%)
Query: 525 YQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNTLIL 563
Y+F+ K G+++ L+S+W +F NPWTK++EY++S NT++L
Sbjct: 420 YKFRAKDGSFITLKSQWFSFMNPWTKELEYIVSNNTVVL 458
Score = 119 (46.9 bits), Expect = 1.1e-49, Sum P(4) = 1.1e-49
Identities = 25/85 (29%), Positives = 46/85 (54%)
Query: 442 EESEDRKYSVIQCTGYLKSWAPAKMXXXXXXXXXXXXXXXXXXXLVAVGRVLADKTRILN 501
++ + RKY I CTGY+K+W P+++ LVA+GR+ +
Sbjct: 289 KKKDHRKYCTIHCTGYMKNWPPSEVGVEEENDVEKNSSNFNC--LVAIGRLHPYIVPQKS 346
Query: 502 KQVNLRPIQFLSRHALDGKFLFVYQ 526
++ ++ +F++R A+DGKF++V Q
Sbjct: 347 GEIKVKATEFVTRFAMDGKFVYVDQ 371
Score = 103 (41.3 bits), Expect = 5.0e-48, Sum P(4) = 5.0e-48
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 401 TTTGAAASCHRKKKQQQSDRKYSVIQCTGYLKSWAPAKMGLEESED 446
TT C K++ RKY I CTGY+K+W P+++G+EE D
Sbjct: 276 TTVKEEKECLPNPKKKDH-RKYCTIHCTGYMKNWPPSEVGVEEEND 320
Score = 102 (41.0 bits), Expect = 6.4e-24, Sum P(4) = 6.4e-24
Identities = 22/47 (46%), Positives = 32/47 (68%)
Query: 289 DQELKHLILQAAEGFLQNHSEIEKRRRDKMNTYITELSAMVPTLLPV 335
+++ +HL ++ F + HS+ EKRRRDKMN I ELSAM+P P+
Sbjct: 82 NEDEEHLKIK---DFREAHSQTEKRRRDKMNNLIEELSAMIPQCNPM 125
Score = 84 (34.6 bits), Expect = 1.1e-49, Sum P(4) = 1.1e-49
Identities = 20/34 (58%), Positives = 22/34 (64%)
Query: 331 TLLPVKTADIPAEVSRLCPGARRSFFCRMKCKHT 364
T L V T D A +RL GARRSFFCR+KC T
Sbjct: 244 TGLQVHT-DFQAGPARLNSGARRSFFCRIKCSRT 276
>UNIPROTKB|E1C1C5 [details] [associations]
symbol:ARNTL2 "Aryl hydrocarbon receptor nuclear
translocator-like protein 2" species:9031 "Gallus gallus"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000982 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0007623 GO:GO:0045944 GO:GO:0005667 GO:GO:0004871
GO:GO:0000982 SMART:SM00086 TIGRFAMs:TIGR00229
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
OMA:IPQCNPM EMBL:AADN02006684 IPI:IPI00598933
Ensembl:ENSGALT00000022820 ArrayExpress:E1C1C5 Uniprot:E1C1C5
Length = 624
Score = 310 (114.2 bits), Expect = 1.2e-49, Sum P(4) = 1.2e-49
Identities = 59/86 (68%), Positives = 72/86 (83%)
Query: 219 RQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSYT 278
R+ HS+ EKRRRDKMN I ELSAM+P C+ M+RKLDKLTVLRMAVQHLK+++G+ SYT
Sbjct: 94 REAHSQTEKRRRDKMNNLIEELSAMIPQCNPMARKLDKLTVLRMAVQHLKSLKGSTSSYT 153
Query: 279 EGHYKPAFLTDQELKHLILQAAEGFL 304
E YKP+FL D EL+ LIL+AA+GFL
Sbjct: 154 EVRYKPSFLKDDELRQLILRAADGFL 179
Score = 152 (58.6 bits), Expect = 2.8e-29, Sum P(4) = 2.8e-29
Identities = 32/49 (65%), Positives = 38/49 (77%)
Query: 160 CAISDLSAQGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKS 208
C I + Q L+GQS FD LHPKDVAKVKEQL SSD+SPRE+L+D K+
Sbjct: 197 CKILNYD-QTSLIGQSLFDYLHPKDVAKVKEQLSSSDVSPREKLVDGKT 244
Score = 133 (51.9 bits), Expect = 1.2e-49, Sum P(4) = 1.2e-49
Identities = 19/39 (48%), Positives = 33/39 (84%)
Query: 525 YQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNTLIL 563
Y+F+ K G+++ L+S+W +F NPWTK++EY++S NT++L
Sbjct: 420 YKFRAKDGSFITLKSQWFSFMNPWTKELEYIVSNNTVVL 458
Score = 119 (46.9 bits), Expect = 1.2e-49, Sum P(4) = 1.2e-49
Identities = 25/85 (29%), Positives = 46/85 (54%)
Query: 442 EESEDRKYSVIQCTGYLKSWAPAKMXXXXXXXXXXXXXXXXXXXLVAVGRVLADKTRILN 501
++ + RKY I CTGY+K+W P+++ LVA+GR+ +
Sbjct: 289 KKKDHRKYCTIHCTGYMKNWPPSEVGVEEENDVEKNSSNFNC--LVAIGRLHPYIVPQKS 346
Query: 502 KQVNLRPIQFLSRHALDGKFLFVYQ 526
++ ++ +F++R A+DGKF++V Q
Sbjct: 347 GEIKVKATEFVTRFAMDGKFVYVDQ 371
Score = 103 (41.3 bits), Expect = 5.2e-48, Sum P(4) = 5.2e-48
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 401 TTTGAAASCHRKKKQQQSDRKYSVIQCTGYLKSWAPAKMGLEESED 446
TT C K++ RKY I CTGY+K+W P+++G+EE D
Sbjct: 276 TTVKEEKECLPNPKKKDH-RKYCTIHCTGYMKNWPPSEVGVEEEND 320
Score = 102 (41.0 bits), Expect = 6.5e-24, Sum P(4) = 6.5e-24
Identities = 22/47 (46%), Positives = 32/47 (68%)
Query: 289 DQELKHLILQAAEGFLQNHSEIEKRRRDKMNTYITELSAMVPTLLPV 335
+++ +HL ++ F + HS+ EKRRRDKMN I ELSAM+P P+
Sbjct: 82 NEDEEHLKIK---DFREAHSQTEKRRRDKMNNLIEELSAMIPQCNPM 125
Score = 84 (34.6 bits), Expect = 1.2e-49, Sum P(4) = 1.2e-49
Identities = 20/34 (58%), Positives = 22/34 (64%)
Query: 331 TLLPVKTADIPAEVSRLCPGARRSFFCRMKCKHT 364
T L V T D A +RL GARRSFFCR+KC T
Sbjct: 244 TGLQVHT-DFQAGPARLNSGARRSFFCRIKCSRT 276
>UNIPROTKB|F1NQL8 [details] [associations]
symbol:ARNTL2 "Aryl hydrocarbon receptor nuclear
translocator-like protein 2" species:9031 "Gallus gallus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0005667 GO:GO:0004871 SMART:SM00086
TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10
SUPFAM:SSF47459 IPI:IPI00819869 EMBL:AADN02006684
Ensembl:ENSGALT00000037361 ArrayExpress:F1NQL8 Uniprot:F1NQL8
Length = 623
Score = 310 (114.2 bits), Expect = 1.8e-49, Sum P(4) = 1.8e-49
Identities = 59/86 (68%), Positives = 72/86 (83%)
Query: 219 RQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSYT 278
R+ HS+ EKRRRDKMN I ELSAM+P C+ M+RKLDKLTVLRMAVQHLK+++G+ SYT
Sbjct: 94 REAHSQTEKRRRDKMNNLIEELSAMIPQCNPMARKLDKLTVLRMAVQHLKSLKGSTSSYT 153
Query: 279 EGHYKPAFLTDQELKHLILQAAEGFL 304
E YKP+FL D EL+ LIL+AA+GFL
Sbjct: 154 EVRYKPSFLKDDELRQLILRAADGFL 179
Score = 152 (58.6 bits), Expect = 4.4e-29, Sum P(4) = 4.4e-29
Identities = 32/49 (65%), Positives = 38/49 (77%)
Query: 160 CAISDLSAQGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKS 208
C I + Q L+GQS FD LHPKDVAKVKEQL SSD+SPRE+L+D K+
Sbjct: 197 CKILNYD-QTSLIGQSLFDYLHPKDVAKVKEQLSSSDVSPREKLVDGKT 244
Score = 133 (51.9 bits), Expect = 1.8e-49, Sum P(4) = 1.8e-49
Identities = 19/39 (48%), Positives = 33/39 (84%)
Query: 525 YQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNTLIL 563
Y+F+ K G+++ L+S+W +F NPWTK++EY++S NT++L
Sbjct: 421 YKFRAKDGSFITLKSQWFSFMNPWTKELEYIVSNNTVVL 459
Score = 117 (46.2 bits), Expect = 1.8e-49, Sum P(4) = 1.8e-49
Identities = 25/82 (30%), Positives = 44/82 (53%)
Query: 445 EDRKYSVIQCTGYLKSWAPAKMXXXXXXXXXXXXXXXXXXXLVAVGRVLADKTRILNKQV 504
+ RKY I CTGY+K+W P+++ LVA+GR+ + ++
Sbjct: 293 DHRKYCTIHCTGYMKNWPPSEVGVEEENDVEKNSSNFNC--LVAIGRLHPYIVPQKSGEI 350
Query: 505 NLRPIQFLSRHALDGKFLFVYQ 526
++ +F++R A+DGKF++V Q
Sbjct: 351 KVKATEFVTRFAMDGKFVYVDQ 372
Score = 110 (43.8 bits), Expect = 9.7e-49, Sum P(4) = 9.7e-49
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 401 TTTGAAASCHRKKKQQQSDRKYSVIQCTGYLKSWAPAKMGLEESED 446
TT C K++ RKY I CTGY+K+W P+++G+EE D
Sbjct: 276 TTVKEEKECLPNPKKKVDHRKYCTIHCTGYMKNWPPSEVGVEEEND 321
Score = 102 (41.0 bits), Expect = 1.0e-23, Sum P(4) = 1.0e-23
Identities = 22/47 (46%), Positives = 32/47 (68%)
Query: 289 DQELKHLILQAAEGFLQNHSEIEKRRRDKMNTYITELSAMVPTLLPV 335
+++ +HL ++ F + HS+ EKRRRDKMN I ELSAM+P P+
Sbjct: 82 NEDEEHLKIK---DFREAHSQTEKRRRDKMNNLIEELSAMIPQCNPM 125
Score = 84 (34.6 bits), Expect = 1.8e-49, Sum P(4) = 1.8e-49
Identities = 20/34 (58%), Positives = 22/34 (64%)
Query: 331 TLLPVKTADIPAEVSRLCPGARRSFFCRMKCKHT 364
T L V T D A +RL GARRSFFCR+KC T
Sbjct: 244 TGLQVHT-DFQAGPARLNSGARRSFFCRIKCSRT 276
>ZFIN|ZDB-GENE-000509-2 [details] [associations]
symbol:arntl2 "aryl hydrocarbon receptor nuclear
translocator-like 2" species:7955 "Danio rerio" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0009648 "photoperiodism" evidence=IEP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009416 "response
to light stimulus" evidence=IGI] [GO:0007623 "circadian rhythm"
evidence=IGI] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 ZFIN:ZDB-GENE-000509-2
GO:GO:0005737 GO:GO:0003677 GO:GO:0007623 GO:GO:0003700
GO:GO:0006351 GO:GO:0005667 GO:GO:0004871 SMART:SM00086
TIGRFAMs:TIGR00229 HOGENOM:HOG000234379 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOVERGEN:HBG107503 OrthoDB:EOG4DFPNB GO:GO:0009648
eggNOG:NOG285764 EMBL:BC128806 IPI:IPI00482035 UniGene:Dr.81323
ProteinModelPortal:A1A5T9 InParanoid:A1A5T9 ArrayExpress:A1A5T9
Uniprot:A1A5T9
Length = 631
Score = 325 (119.5 bits), Expect = 3.3e-48, Sum P(3) = 3.3e-48
Identities = 61/86 (70%), Positives = 74/86 (86%)
Query: 219 RQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSYT 278
R+ HS+IEKRRRDKMN I EL+AM+P C+ MSRKLDKLTVLRMAVQHLK+++GA S+
Sbjct: 91 REPHSQIEKRRRDKMNNLIDELAAMIPTCNPMSRKLDKLTVLRMAVQHLKSLKGATSSFA 150
Query: 279 EGHYKPAFLTDQELKHLILQAAEGFL 304
E +YKPAFL D ELKHL+L+AA+GFL
Sbjct: 151 EANYKPAFLPDDELKHLVLRAADGFL 176
Score = 150 (57.9 bits), Expect = 4.0e-26, Sum P(3) = 4.0e-26
Identities = 32/49 (65%), Positives = 38/49 (77%)
Query: 170 ELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSK-QVIVGLPV 217
EL+GQS FD +HPKD+ KVKEQL +S+L PRERLID K+ QV LPV
Sbjct: 203 ELIGQSLFDYVHPKDIGKVKEQLSASELYPRERLIDAKTGLQVQAELPV 251
Score = 136 (52.9 bits), Expect = 3.3e-48, Sum P(3) = 3.3e-48
Identities = 21/38 (55%), Positives = 32/38 (84%)
Query: 525 YQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNTLI 562
Y+FK K G++V LQS+W +F NPWTK++EY++S NT++
Sbjct: 418 YKFKTKYGSFVNLQSQWFSFINPWTKEVEYIVSTNTVV 455
Score = 133 (51.9 bits), Expect = 3.3e-48, Sum P(3) = 3.3e-48
Identities = 34/129 (26%), Positives = 59/129 (45%)
Query: 398 EPDTTTGAAASCHRKKKQQQSDRKYSVIQCTGYLKSWAPAKMGLEESEDRKYSVIQCTGY 457
+ + G+A C ++ KY+ I A A ++ E ++Y + CTGY
Sbjct: 246 QAELPVGSARLCSGARRSFFCRMKYNKITVKEEKDFQAGAS---KKKESQRYCTVHCTGY 302
Query: 458 LKSWAPAKMXXXXXXXXXXXXXXXXXXXLVAVGRVLADKTRILNKQVNLRPIQFLSRHAL 517
+++W P + LVA+GRV N ++ ++P +F++R+A+
Sbjct: 303 MRTW-PTRQLATEGEAEADKESSHFSC-LVAMGRVHPHTLPQANGEIKVKPTEFVTRYAM 360
Query: 518 DGKFLFVYQ 526
DGKF FV Q
Sbjct: 361 DGKFTFVDQ 369
Score = 105 (42.0 bits), Expect = 2.4e-21, Sum P(3) = 2.4e-21
Identities = 20/29 (68%), Positives = 24/29 (82%)
Query: 307 HSEIEKRRRDKMNTYITELSAMVPTLLPV 335
HS+IEKRRRDKMN I EL+AM+PT P+
Sbjct: 94 HSQIEKRRRDKMNNLIDELAAMIPTCNPM 122
Score = 89 (36.4 bits), Expect = 1.3e-43, Sum P(3) = 1.3e-43
Identities = 16/23 (69%), Positives = 19/23 (82%)
Query: 338 ADIPAEVSRLCPGARRSFFCRMK 360
A++P +RLC GARRSFFCRMK
Sbjct: 247 AELPVGSARLCSGARRSFFCRMK 269
Score = 39 (18.8 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 170 ELLGQSWFDILHPKDVAKVKEQ 191
ELLG S ++ H D+ + E+
Sbjct: 381 ELLGTSCYEYFHLDDLPHLAER 402
>UNIPROTKB|H0Y5R1 [details] [associations]
symbol:ARNTL2 "Aryl hydrocarbon receptor nuclear
translocator-like protein 2" species:9606 "Homo sapiens"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0005667 GO:GO:0004871 SMART:SM00086
TIGRFAMs:TIGR00229 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC068794
EMBL:AC092829 HGNC:HGNC:18984 Ensembl:ENST00000457040
Uniprot:H0Y5R1
Length = 588
Score = 308 (113.5 bits), Expect = 5.3e-48, Sum P(4) = 5.3e-48
Identities = 62/111 (55%), Positives = 82/111 (73%)
Query: 195 SDLSPRERLIDVKSKQVIVGLPV-SRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRK 253
SD S + L + S ++ + SR+ HS+ EKRRRDKMN I ELSAM+P C+ M+RK
Sbjct: 36 SDPSHQNPLTYLLSTRIEISASSGSREAHSQTEKRRRDKMNNLIEELSAMIPQCNPMARK 95
Query: 254 LDKLTVLRMAVQHLKTIRGAVHSYTEGHYKPAFLTDQELKHLILQAAEGFL 304
LDKLTVLRMAVQHL++++G +SY +Y+P+FL D EL+HLIL+ AEGFL
Sbjct: 96 LDKLTVLRMAVQHLRSLKGLTNSYVGSNYRPSFLQDNELRHLILKTAEGFL 146
Score = 150 (57.9 bits), Expect = 1.5e-27, Sum P(4) = 1.5e-27
Identities = 30/41 (73%), Positives = 33/41 (80%)
Query: 168 QGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKS 208
Q L GQS FD LHPKDVAKVKEQL S D+SPRE+LID K+
Sbjct: 171 QASLTGQSLFDFLHPKDVAKVKEQLSSFDISPREKLIDAKT 211
Score = 135 (52.6 bits), Expect = 5.3e-48, Sum P(4) = 5.3e-48
Identities = 21/39 (53%), Positives = 33/39 (84%)
Query: 525 YQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNTLIL 563
Y+F+ K G++V L+S+W +F NPWTK++EY++S NTL+L
Sbjct: 387 YKFRAKDGSFVTLKSQWFSFTNPWTKELEYIVSVNTLVL 425
Score = 122 (48.0 bits), Expect = 5.3e-48, Sum P(4) = 5.3e-48
Identities = 27/85 (31%), Positives = 46/85 (54%)
Query: 442 EESEDRKYSVIQCTGYLKSWAPAKMXXXXXXXXXXXXXXXXXXXLVAVGRVLADKTRILN 501
++ E RK+ I CTGYL+SW P + LVA+GR+ +
Sbjct: 256 KKKEHRKFYTIHCTGYLRSWPPNIVGMEEERNSKKDNSNFTC--LVAIGRLQPYIVPQNS 313
Query: 502 KQVNLRPIQFLSRHALDGKFLFVYQ 526
++N++P +F++R A++GKF++V Q
Sbjct: 314 GEINVKPTEFITRFAVNGKFVYVDQ 338
Score = 106 (42.4 bits), Expect = 7.4e-23, Sum P(4) = 7.4e-23
Identities = 21/39 (53%), Positives = 27/39 (69%)
Query: 297 LQAAEGFLQNHSEIEKRRRDKMNTYITELSAMVPTLLPV 335
+ A+ G + HS+ EKRRRDKMN I ELSAM+P P+
Sbjct: 54 ISASSGSREAHSQTEKRRRDKMNNLIEELSAMIPQCNPM 92
Score = 92 (37.4 bits), Expect = 6.8e-45, Sum P(4) = 6.8e-45
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 412 KKKQQQSDRKYSVIQCTGYLKSWAPAKMGLEESEDRK 448
KKK+ RK+ I CTGYL+SW P +G+EE + K
Sbjct: 256 KKKEH---RKFYTIHCTGYLRSWPPNIVGMEEERNSK 289
Score = 63 (27.2 bits), Expect = 5.3e-48, Sum P(4) = 5.3e-48
Identities = 13/26 (50%), Positives = 20/26 (76%)
Query: 338 ADIPAEVSRLCPGARRSFFCRMK-CK 362
+++ A +R+ G+RRSFFCR+K CK
Sbjct: 217 SNLHAGRTRVYSGSRRSFFCRIKSCK 242
Score = 39 (18.8 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 13/48 (27%), Positives = 23/48 (47%)
Query: 157 QHGCAISDLSAQGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLI 204
Q AI Q ELLG S ++ H D + ++ + L +E+++
Sbjct: 338 QRATAILGYLPQ-ELLGTSCYEYFHQDDHNNLTDK-HKAVLQSKEKIL 383
>UNIPROTKB|Q8WYA1 [details] [associations]
symbol:ARNTL2 "Aryl hydrocarbon receptor nuclear
translocator-like protein 2" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA;NAS] [GO:0005634 "nucleus" evidence=IDA;NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0009649 "entrainment of circadian clock"
evidence=NAS] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0007623 "circadian
rhythm" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0000982 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity"
evidence=IDA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005634 GO:GO:0005737
GO:GO:0003677 GO:GO:0009649 GO:GO:0007623 GO:GO:0045944
GO:GO:0005667 GO:GO:0004871 GO:GO:0000982 SMART:SM00086
TIGRFAMs:TIGR00229 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOVERGEN:HBG107503 CTD:56938 eggNOG:NOG288887 KO:K09099
EMBL:AB039921 EMBL:AF256215 EMBL:AF231338 EMBL:AF231339
EMBL:AF246960 EMBL:AF246961 EMBL:AF246962 EMBL:AF246963
EMBL:AK296706 EMBL:AC068794 EMBL:AC092829 EMBL:BC000172
EMBL:BC125061 EMBL:BC125062 IPI:IPI00142781 IPI:IPI00163662
IPI:IPI00465306 IPI:IPI00788724 IPI:IPI00789255 IPI:IPI00795339
IPI:IPI00827866 IPI:IPI00827897 IPI:IPI01009213
RefSeq:NP_001234931.1 RefSeq:NP_001234932.1 RefSeq:NP_001234933.1
RefSeq:NP_001234934.1 RefSeq:NP_064568.3 UniGene:Hs.434269
UniGene:Hs.445447 PDB:2KDK PDBsum:2KDK ProteinModelPortal:Q8WYA1
SMR:Q8WYA1 IntAct:Q8WYA1 STRING:Q8WYA1 PhosphoSite:Q8WYA1
DMDM:124007121 PaxDb:Q8WYA1 PRIDE:Q8WYA1 Ensembl:ENST00000261178
Ensembl:ENST00000266503 Ensembl:ENST00000311001
Ensembl:ENST00000395901 Ensembl:ENST00000542388
Ensembl:ENST00000544915 Ensembl:ENST00000546179 GeneID:56938
KEGG:hsa:56938 UCSC:uc001rht.2 UCSC:uc001rhu.2 UCSC:uc001rhv.2
UCSC:uc001rhw.3 UCSC:uc009zji.2 GeneCards:GC12P027485
H-InvDB:HIX0037110 HGNC:HGNC:18984 MIM:614517 neXtProt:NX_Q8WYA1
PharmGKB:PA134896555 InParanoid:Q8WYA1 OMA:IPQCNPM PhylomeDB:Q8WYA1
GenomeRNAi:56938 NextBio:62501 ArrayExpress:Q8WYA1 Bgee:Q8WYA1
CleanEx:HS_ARNTL2 Genevestigator:Q8WYA1 Uniprot:Q8WYA1
Length = 636
Score = 304 (112.1 bits), Expect = 5.8e-47, Sum P(4) = 5.8e-47
Identities = 57/92 (61%), Positives = 73/92 (79%)
Query: 213 VGLPVSRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRG 272
V + R+ HS+ EKRRRDKMN I ELSAM+P C+ M+RKLDKLTVLRMAVQHL++++G
Sbjct: 103 VKMKAFREAHSQTEKRRRDKMNNLIEELSAMIPQCNPMARKLDKLTVLRMAVQHLRSLKG 162
Query: 273 AVHSYTEGHYKPAFLTDQELKHLILQAAEGFL 304
+SY +Y+P+FL D EL+HLIL+ AEGFL
Sbjct: 163 LTNSYVGSNYRPSFLQDNELRHLILKTAEGFL 194
Score = 150 (57.9 bits), Expect = 2.3e-27, Sum P(4) = 2.3e-27
Identities = 30/41 (73%), Positives = 33/41 (80%)
Query: 168 QGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKS 208
Q L GQS FD LHPKDVAKVKEQL S D+SPRE+LID K+
Sbjct: 219 QASLTGQSLFDFLHPKDVAKVKEQLSSFDISPREKLIDAKT 259
Score = 135 (52.6 bits), Expect = 5.8e-47, Sum P(4) = 5.8e-47
Identities = 21/39 (53%), Positives = 33/39 (84%)
Query: 525 YQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNTLIL 563
Y+F+ K G++V L+S+W +F NPWTK++EY++S NTL+L
Sbjct: 435 YKFRAKDGSFVTLKSQWFSFTNPWTKELEYIVSVNTLVL 473
Score = 122 (48.0 bits), Expect = 5.8e-47, Sum P(4) = 5.8e-47
Identities = 27/85 (31%), Positives = 46/85 (54%)
Query: 442 EESEDRKYSVIQCTGYLKSWAPAKMXXXXXXXXXXXXXXXXXXXLVAVGRVLADKTRILN 501
++ E RK+ I CTGYL+SW P + LVA+GR+ +
Sbjct: 304 KKKEHRKFYTIHCTGYLRSWPPNIVGMEEERNSKKDNSNFTC--LVAIGRLQPYIVPQNS 361
Query: 502 KQVNLRPIQFLSRHALDGKFLFVYQ 526
++N++P +F++R A++GKF++V Q
Sbjct: 362 GEINVKPTEFITRFAVNGKFVYVDQ 386
Score = 102 (41.0 bits), Expect = 2.9e-22, Sum P(4) = 2.9e-22
Identities = 20/35 (57%), Positives = 25/35 (71%)
Query: 301 EGFLQNHSEIEKRRRDKMNTYITELSAMVPTLLPV 335
+ F + HS+ EKRRRDKMN I ELSAM+P P+
Sbjct: 106 KAFREAHSQTEKRRRDKMNNLIEELSAMIPQCNPM 140
Score = 92 (37.4 bits), Expect = 7.4e-44, Sum P(4) = 7.4e-44
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 412 KKKQQQSDRKYSVIQCTGYLKSWAPAKMGLEESEDRK 448
KKK+ RK+ I CTGYL+SW P +G+EE + K
Sbjct: 304 KKKEH---RKFYTIHCTGYLRSWPPNIVGMEEERNSK 337
Score = 63 (27.2 bits), Expect = 5.8e-47, Sum P(4) = 5.8e-47
Identities = 13/26 (50%), Positives = 20/26 (76%)
Query: 338 ADIPAEVSRLCPGARRSFFCRMK-CK 362
+++ A +R+ G+RRSFFCR+K CK
Sbjct: 265 SNLHAGRTRVYSGSRRSFFCRIKSCK 290
Score = 39 (18.8 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 13/48 (27%), Positives = 23/48 (47%)
Query: 157 QHGCAISDLSAQGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLI 204
Q AI Q ELLG S ++ H D + ++ + L +E+++
Sbjct: 386 QRATAILGYLPQ-ELLGTSCYEYFHQDDHNNLTDK-HKAVLQSKEKIL 431
>UNIPROTKB|A6NGV6 [details] [associations]
symbol:ARNT "Aryl hydrocarbon receptor nuclear
translocator" species:9606 "Homo sapiens" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 GO:GO:0005634 GO:GO:0005737
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 TIGRFAMs:TIGR00229 HOGENOM:HOG000234379
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOVERGEN:HBG000164 EMBL:AL355860
HGNC:HGNC:700 ChiTaRS:ARNT IPI:IPI00964540
ProteinModelPortal:A6NGV6 SMR:A6NGV6 STRING:A6NGV6
Ensembl:ENST00000471844 UCSC:uc009wme.2 ArrayExpress:A6NGV6
Bgee:A6NGV6 Uniprot:A6NGV6
Length = 416
Score = 324 (119.1 bits), Expect = 2.9e-46, Sum P(3) = 2.9e-46
Identities = 60/88 (68%), Positives = 77/88 (87%)
Query: 217 VSRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHS 276
++R+NHSEIE+RRR+KM YITELS MVP C A++RK DKLT+LRMAV H+K++RG ++
Sbjct: 89 LARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVSHMKSLRGTGNT 148
Query: 277 YTEGHYKPAFLTDQELKHLILQAAEGFL 304
T+G YKP+FLTDQELKHLIL+AA+GFL
Sbjct: 149 STDGSYKPSFLTDQELKHLILEAADGFL 176
Score = 110 (43.8 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 21/27 (77%), Positives = 24/27 (88%)
Query: 305 QNHSEIEKRRRDKMNTYITELSAMVPT 331
+NHSEIE+RRR+KM YITELS MVPT
Sbjct: 92 ENHSEIERRRRNKMTAYITELSDMVPT 118
Score = 104 (41.7 bits), Expect = 2.9e-46, Sum P(3) = 2.9e-46
Identities = 25/87 (28%), Positives = 42/87 (48%)
Query: 439 MGLEESEDRKYSVIQCTGYLKSWAPAKMXXXXXXXXXXXXXXXXXXXLVAVGRVLADKTR 498
+G + + + V+ CTGY+K+W PA + LVA+GR+ +
Sbjct: 293 LGSVKDGEPHFVVVHCTGYIKAWPPAGVSLPDDDPEAGQGSKFC---LVAIGRLQVTSSP 349
Query: 499 ILNKQVNL-RPIQFLSRHALDGKFLFV 524
N+ +P +F+SRH ++G F FV
Sbjct: 350 NCTDMSNVCQPTEFISRHNIEGIFTFV 376
Score = 85 (35.0 bits), Expect = 2.9e-46, Sum P(3) = 2.9e-46
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 305 QNHSEIEKRRRDKMNTYITELSAMVPTLLPVKTADIPAEVS----RLCPGARRSFFCRMK 360
Q H + + R++++T +E +A+ +L +KT + E R+C G+RRSF CRM+
Sbjct: 212 QVHPDDVDKLREQLST--SE-NALTGRILDLKTGTVKKEGQQSSMRMCMGSRRSFICRMR 268
Query: 361 C 361
C
Sbjct: 269 C 269
Score = 84 (34.6 bits), Expect = 9.9e-07, Sum P(2) = 9.9e-07
Identities = 17/44 (38%), Positives = 29/44 (65%)
Query: 168 QGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQV 211
Q E G + +D +HP DV K++EQL +S+ + R++D+K+ V
Sbjct: 201 QSEWFGSTLYDQVHPDDVDKLREQLSTSENALTGRILDLKTGTV 244
Score = 70 (29.7 bits), Expect = 1.0e-42, Sum P(3) = 1.0e-42
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 422 YSVIQCTGYLKSWAPAKMGLEESE 445
+ V+ CTGY+K+W PA + L + +
Sbjct: 303 FVVVHCTGYIKAWPPAGVSLPDDD 326
>UNIPROTKB|J9P3T5 [details] [associations]
symbol:ARNTL2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AAEX03015178
Ensembl:ENSCAFT00000046810 Uniprot:J9P3T5
Length = 593
Score = 301 (111.0 bits), Expect = 3.9e-46, Sum P(4) = 3.9e-46
Identities = 66/126 (52%), Positives = 87/126 (69%)
Query: 179 ILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQVIVGLPVSRQNHSEIEKRRRDKMNTYIT 238
I+ K V K+ + F+ LS R I++ + G SR+ HS+ EKRRRDKMN I
Sbjct: 36 IMTEKMVEKLSKNPFTYLLSTR---IEISASS---G---SREAHSQTEKRRRDKMNNLIE 86
Query: 239 ELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSYTEGHYKPAFLTDQELKHLILQ 298
ELSAM+P C+ + RKLDKLTVLRMAVQHLK+++G SY +Y+P+F+ D EL+HLIL+
Sbjct: 87 ELSAMIPQCNPVPRKLDKLTVLRMAVQHLKSLKGMTSSYAGDNYRPSFIQDNELRHLILK 146
Query: 299 AAEGFL 304
AEGFL
Sbjct: 147 TAEGFL 152
Score = 155 (59.6 bits), Expect = 2.1e-27, Sum P(4) = 2.1e-27
Identities = 35/62 (56%), Positives = 41/62 (66%)
Query: 168 QGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQVIVGLPVSRQNHSEIEK 227
Q L G+S FD LHPKDVAKVKEQL SSD+SPRE+LID K+ + G S + H
Sbjct: 177 QASLTGRSLFDFLHPKDVAKVKEQLSSSDISPREKLIDAKTGLQVHGNFHSGRTHVYSGS 236
Query: 228 RR 229
RR
Sbjct: 237 RR 238
Score = 137 (53.3 bits), Expect = 3.9e-46, Sum P(4) = 3.9e-46
Identities = 21/39 (53%), Positives = 33/39 (84%)
Query: 525 YQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNTLIL 563
Y+F+ K G++V L+S+W +F NPWTK++EY++S NTL+L
Sbjct: 393 YKFRKKDGSFVTLKSQWFSFTNPWTKELEYIVSVNTLVL 431
Score = 114 (45.2 bits), Expect = 3.9e-46, Sum P(4) = 3.9e-46
Identities = 25/85 (29%), Positives = 45/85 (52%)
Query: 442 EESEDRKYSVIQCTGYLKSWAPAKMXXXXXXXXXXXXXXXXXXXLVAVGRVLADKTRILN 501
++ + RK+ I CTGYL+SW P + LVA+GR+ +
Sbjct: 262 KKKDHRKFCTIHCTGYLRSWPPNIVGLEEERDNKKNSSNFTC--LVAIGRLHPYIVPQNS 319
Query: 502 KQVNLRPIQFLSRHALDGKFLFVYQ 526
++ ++P +F++R A++GKF++V Q
Sbjct: 320 GEIKVKPTEFITRFAMNGKFVYVDQ 344
Score = 109 (43.4 bits), Expect = 1.9e-22, Sum P(4) = 1.9e-22
Identities = 22/39 (56%), Positives = 27/39 (69%)
Query: 297 LQAAEGFLQNHSEIEKRRRDKMNTYITELSAMVPTLLPV 335
+ A+ G + HS+ EKRRRDKMN I ELSAM+P PV
Sbjct: 60 ISASSGSREAHSQTEKRRRDKMNNLIEELSAMIPQCNPV 98
Score = 99 (39.9 bits), Expect = 1.4e-44, Sum P(4) = 1.4e-44
Identities = 17/34 (50%), Positives = 23/34 (67%)
Query: 415 QQQSDRKYSVIQCTGYLKSWAPAKMGLEESEDRK 448
+++ RK+ I CTGYL+SW P +GLEE D K
Sbjct: 262 KKKDHRKFCTIHCTGYLRSWPPNIVGLEEERDNK 295
Score = 62 (26.9 bits), Expect = 3.9e-46, Sum P(4) = 3.9e-46
Identities = 12/14 (85%), Positives = 13/14 (92%)
Query: 350 GARRSFFCRMK-CK 362
G+RRSFFCRMK CK
Sbjct: 235 GSRRSFFCRMKSCK 248
Score = 40 (19.1 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 13/47 (27%), Positives = 23/47 (48%)
Query: 157 QHGCAISDLSAQGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERL 203
Q AI Q ELLG S ++ H D + + ++ + L +E++
Sbjct: 344 QRATAILGYLPQ-ELLGTSCYEYFHQDDHSNLTDK-HKAVLQSKEKI 388
>UNIPROTKB|F1SG81 [details] [associations]
symbol:ARNTL2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0007623 "circadian
rhythm" evidence=IEA] [GO:0000982 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677 GO:GO:0007623
GO:GO:0045944 GO:GO:0005667 GO:GO:0004871 GO:GO:0000982
SMART:SM00086 TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 OMA:IPQCNPM EMBL:CU633729
Ensembl:ENSSSCT00000000594 Uniprot:F1SG81
Length = 489
Score = 288 (106.4 bits), Expect = 7.9e-46, Sum P(4) = 7.9e-46
Identities = 53/86 (61%), Positives = 69/86 (80%)
Query: 219 RQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSYT 278
R+ HS+ EKRRRDKMN I LSAM+P CH ++RKLDKLTVLRMAVQHL++++G +SY
Sbjct: 2 REAHSQTEKRRRDKMNNLIETLSAMIPQCHPVARKLDKLTVLRMAVQHLRSLKGMANSYM 61
Query: 279 EGHYKPAFLTDQELKHLILQAAEGFL 304
+ +P+F+ D EL+HLIL+ AEGFL
Sbjct: 62 GNNCRPSFIQDNELRHLILKTAEGFL 87
Score = 158 (60.7 bits), Expect = 1.0e-28, Sum P(4) = 1.0e-28
Identities = 35/57 (61%), Positives = 40/57 (70%)
Query: 168 QGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQVIVGLPVSRQNHSE 224
Q L GQS FD LHPKDVAKVKEQL SSD+SPRE+L+D K+ GL V H+E
Sbjct: 112 QASLTGQSLFDFLHPKDVAKVKEQLSSSDISPREKLMDAKT-----GLQVHSNFHTE 163
Score = 135 (52.6 bits), Expect = 7.9e-46, Sum P(4) = 7.9e-46
Identities = 21/39 (53%), Positives = 33/39 (84%)
Query: 525 YQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNTLIL 563
Y+F+ K G++V L+S+W +F NPWTK++EY++S NTL+L
Sbjct: 332 YKFRAKDGSFVTLKSQWFSFTNPWTKELEYIVSVNTLVL 370
Score = 111 (44.1 bits), Expect = 7.9e-46, Sum P(4) = 7.9e-46
Identities = 24/85 (28%), Positives = 45/85 (52%)
Query: 442 EESEDRKYSVIQCTGYLKSWAPAKMXXXXXXXXXXXXXXXXXXXLVAVGRVLADKTRILN 501
++ + RK+ + CTGYL+SW P + LVA+GR+ +
Sbjct: 197 KKKDYRKFCTVHCTGYLRSWPPNIVGMEEERDAKKDSRNFTC--LVAIGRLHPYIVPQNS 254
Query: 502 KQVNLRPIQFLSRHALDGKFLFVYQ 526
++ ++P +F++R A++GKF++V Q
Sbjct: 255 GEIQVKPTEFITRFAMNGKFVYVDQ 279
Score = 94 (38.1 bits), Expect = 4.5e-44, Sum P(4) = 4.5e-44
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 412 KKKQQQSDRKYSVIQCTGYLKSWAPAKMGLEESEDRK 448
KKK RK+ + CTGYL+SW P +G+EE D K
Sbjct: 197 KKKDY---RKFCTVHCTGYLRSWPPNIVGMEEERDAK 230
Score = 94 (38.1 bits), Expect = 8.5e-22, Sum P(4) = 8.5e-22
Identities = 19/29 (65%), Positives = 21/29 (72%)
Query: 307 HSEIEKRRRDKMNTYITELSAMVPTLLPV 335
HS+ EKRRRDKMN I LSAM+P PV
Sbjct: 5 HSQTEKRRRDKMNNLIETLSAMIPQCHPV 33
Score = 71 (30.1 bits), Expect = 7.9e-46, Sum P(4) = 7.9e-46
Identities = 15/21 (71%), Positives = 17/21 (80%)
Query: 343 EVSRLCPGARRSFFCRMK-CK 362
E SR+ G+RRSFFCRMK CK
Sbjct: 163 ERSRVYSGSRRSFFCRMKSCK 183
Score = 37 (18.1 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 9/34 (26%), Positives = 18/34 (52%)
Query: 170 ELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERL 203
ELLG S ++ H D + + + + L +E++
Sbjct: 295 ELLGTSCYEYFHQDDHSNLTNK-HKAVLQSKEKI 327
>UNIPROTKB|F1PZY3 [details] [associations]
symbol:ARNTL2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0000982 "RNA polymerase II
core promoter proximal region sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0007623 GO:GO:0045944 GO:GO:0005667 GO:GO:0004871
GO:GO:0000982 SMART:SM00086 TIGRFAMs:TIGR00229
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
OMA:IPQCNPM EMBL:AAEX03015178 Ensembl:ENSCAFT00000017664
Uniprot:F1PZY3
Length = 624
Score = 295 (108.9 bits), Expect = 6.0e-45, Sum P(4) = 6.0e-45
Identities = 55/86 (63%), Positives = 69/86 (80%)
Query: 219 RQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSYT 278
R+ HS+ EKRRRDKMN I ELSAM+P C+ + RKLDKLTVLRMAVQHLK+++G SY
Sbjct: 98 REAHSQTEKRRRDKMNNLIEELSAMIPQCNPVPRKLDKLTVLRMAVQHLKSLKGMTSSYA 157
Query: 279 EGHYKPAFLTDQELKHLILQAAEGFL 304
+Y+P+F+ D EL+HLIL+ AEGFL
Sbjct: 158 GDNYRPSFIQDNELRHLILKTAEGFL 183
Score = 155 (59.6 bits), Expect = 2.8e-27, Sum P(4) = 2.8e-27
Identities = 35/62 (56%), Positives = 41/62 (66%)
Query: 168 QGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQVIVGLPVSRQNHSEIEK 227
Q L G+S FD LHPKDVAKVKEQL SSD+SPRE+LID K+ + G S + H
Sbjct: 208 QASLTGRSLFDFLHPKDVAKVKEQLSSSDISPREKLIDAKTGLQVHGNFHSGRTHVYSGS 267
Query: 228 RR 229
RR
Sbjct: 268 RR 269
Score = 137 (53.3 bits), Expect = 6.0e-45, Sum P(4) = 6.0e-45
Identities = 21/39 (53%), Positives = 33/39 (84%)
Query: 525 YQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNTLIL 563
Y+F+ K G++V L+S+W +F NPWTK++EY++S NTL+L
Sbjct: 424 YKFRKKDGSFVTLKSQWFSFTNPWTKELEYIVSVNTLVL 462
Score = 114 (45.2 bits), Expect = 6.0e-45, Sum P(4) = 6.0e-45
Identities = 25/85 (29%), Positives = 45/85 (52%)
Query: 442 EESEDRKYSVIQCTGYLKSWAPAKMXXXXXXXXXXXXXXXXXXXLVAVGRVLADKTRILN 501
++ + RK+ I CTGYL+SW P + LVA+GR+ +
Sbjct: 293 KKKDHRKFCTIHCTGYLRSWPPNIVGLEEERDNKKNSSNFTC--LVAIGRLHPYIVPQNS 350
Query: 502 KQVNLRPIQFLSRHALDGKFLFVYQ 526
++ ++P +F++R A++GKF++V Q
Sbjct: 351 GEIKVKPTEFITRFAMNGKFVYVDQ 375
Score = 100 (40.3 bits), Expect = 2.0e-21, Sum P(4) = 2.0e-21
Identities = 20/29 (68%), Positives = 22/29 (75%)
Query: 307 HSEIEKRRRDKMNTYITELSAMVPTLLPV 335
HS+ EKRRRDKMN I ELSAM+P PV
Sbjct: 101 HSQTEKRRRDKMNNLIEELSAMIPQCNPV 129
Score = 99 (39.9 bits), Expect = 2.1e-43, Sum P(4) = 2.1e-43
Identities = 17/34 (50%), Positives = 23/34 (67%)
Query: 415 QQQSDRKYSVIQCTGYLKSWAPAKMGLEESEDRK 448
+++ RK+ I CTGYL+SW P +GLEE D K
Sbjct: 293 KKKDHRKFCTIHCTGYLRSWPPNIVGLEEERDNK 326
Score = 62 (26.9 bits), Expect = 6.0e-45, Sum P(4) = 6.0e-45
Identities = 12/14 (85%), Positives = 13/14 (92%)
Query: 350 GARRSFFCRMK-CK 362
G+RRSFFCRMK CK
Sbjct: 266 GSRRSFFCRMKSCK 279
Score = 40 (19.1 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 13/47 (27%), Positives = 23/47 (48%)
Query: 157 QHGCAISDLSAQGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERL 203
Q AI Q ELLG S ++ H D + + ++ + L +E++
Sbjct: 375 QRATAILGYLPQ-ELLGTSCYEYFHQDDHSNLTDK-HKAVLQSKEKI 419
>ZFIN|ZDB-GENE-001207-3 [details] [associations]
symbol:arnt2 "aryl hydrocarbon receptor nuclear
translocator 2" species:7955 "Danio rerio" [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA;IDA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;IC] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;IDA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0048798 "swim bladder inflation" evidence=IMP]
[GO:0021591 "ventricular system development" evidence=IMP]
[GO:0072576 "liver morphogenesis" evidence=IMP] [GO:0003208
"cardiac ventricle morphogenesis" evidence=IMP] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IPI]
[GO:0001666 "response to hypoxia" evidence=IDA] [GO:0016337
"cell-cell adhesion" evidence=IMP] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0021979 "hypothalamus cell differentiation"
evidence=IMP] [GO:0071542 "dopaminergic neuron differentiation"
evidence=IMP] [GO:0021536 "diencephalon development" evidence=IMP]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610
ZFIN:ZDB-GENE-001207-3 GO:GO:0005737 GO:GO:0045893 GO:GO:0003677
GO:GO:0071542 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 GO:GO:0016337 SMART:SM00086 TIGRFAMs:TIGR00229
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0021591 GO:GO:0003208 GO:GO:0072576 GO:GO:0021979
EMBL:BX936312 EMBL:CABZ01029550 EMBL:CABZ01029551 EMBL:CABZ01029561
EMBL:CABZ01029562 EMBL:CABZ01029563 EMBL:CABZ01029564 EMBL:CU652843
EMBL:CU695017 EMBL:FP017235 EMBL:FP236184 IPI:IPI00504497
Ensembl:ENSDART00000129575 ArrayExpress:F1QVH4 Bgee:F1QVH4
GO:GO:0048798 Uniprot:F1QVH4
Length = 738
Score = 316 (116.3 bits), Expect = 2.7e-44, Sum P(4) = 2.7e-44
Identities = 59/87 (67%), Positives = 76/87 (87%)
Query: 218 SRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSY 277
+R+NHSEIE+RRR+KM YITELS MVP C A++RK DKLT+LRMAV H+K++RG ++
Sbjct: 79 ARENHSEIERRRRNKMTQYITELSDMVPTCSALARKPDKLTILRMAVSHMKSMRGTGNTS 138
Query: 278 TEGHYKPAFLTDQELKHLILQAAEGFL 304
T+G YKP+FLT+QELKHLIL+AA+GFL
Sbjct: 139 TDGAYKPSFLTEQELKHLILEAADGFL 165
Score = 118 (46.6 bits), Expect = 2.7e-44, Sum P(4) = 2.7e-44
Identities = 29/87 (33%), Positives = 41/87 (47%)
Query: 439 MGLEESEDRKYSVIQCTGYLKSWAPAKMXXXXXXXXXXXXXXXXXXXLVAVGRVLADKTR 498
+G + + +YSV+ CTGY+K+W PA M LVA+GR+ +
Sbjct: 282 LGPSKEGEAQYSVVHCTGYIKAWPPAGMTIPDEDTEAGQTSKYC---LVAIGRLQVTSSP 338
Query: 499 ILNKQVNLR-PIQFLSRHALDGKFLFV 524
+ L P +FLSRH DG FV
Sbjct: 339 VSMDMNGLSVPTEFLSRHNSDGIITFV 365
Score = 109 (43.4 bits), Expect = 1.2e-13, Sum P(3) = 1.2e-13
Identities = 21/27 (77%), Positives = 24/27 (88%)
Query: 305 QNHSEIEKRRRDKMNTYITELSAMVPT 331
+NHSEIE+RRR+KM YITELS MVPT
Sbjct: 81 ENHSEIERRRRNKMTQYITELSDMVPT 107
Score = 88 (36.0 bits), Expect = 2.7e-44, Sum P(4) = 2.7e-44
Identities = 22/63 (34%), Positives = 37/63 (58%)
Query: 303 FLQNHSEIEKRRRDKMNTYITELSAMVPTLLPVKTADIPAEVS----RLCPGARRSFFCR 358
F Q H + + R++++T +E ++M +L +KT + E R+C G+RRSF CR
Sbjct: 199 FEQVHPDDVDKLREQLST--SE-NSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRSFICR 255
Query: 359 MKC 361
M+C
Sbjct: 256 MRC 258
Score = 87 (35.7 bits), Expect = 2.1e-11, Sum P(3) = 2.1e-11
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 168 QGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQV 211
Q E G + F+ +HP DV K++EQL +S+ S R++D+K+ V
Sbjct: 190 QSEWFGSTLFEQVHPDDVDKLREQLSTSENSMTGRILDLKTGTV 233
Score = 85 (35.0 bits), Expect = 7.0e-41, Sum P(4) = 7.0e-41
Identities = 12/30 (40%), Positives = 22/30 (73%)
Query: 416 QQSDRKYSVIQCTGYLKSWAPAKMGLEESE 445
++ + +YSV+ CTGY+K+W PA M + + +
Sbjct: 286 KEGEAQYSVVHCTGYIKAWPPAGMTIPDED 315
Score = 76 (31.8 bits), Expect = 2.7e-44, Sum P(4) = 2.7e-44
Identities = 16/45 (35%), Positives = 29/45 (64%)
Query: 517 LDGKFLFV-YQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNT 560
L G+ L V Y+F+ K ++ +++ F+NP++ +IEY+I NT
Sbjct: 407 LKGQVLSVMYRFRMKNREWMLIRTSSFTFQNPYSDEIEYIICTNT 451
>UNIPROTKB|E1BS65 [details] [associations]
symbol:ARNT2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0005667 GO:GO:0004871 SMART:SM00086
TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AADN02041540 EMBL:AADN02041541
EMBL:AADN02041542 EMBL:AADN02041543 IPI:IPI00575824
Ensembl:ENSGALT00000010398 ArrayExpress:E1BS65 Uniprot:E1BS65
Length = 704
Score = 318 (117.0 bits), Expect = 8.2e-44, Sum P(4) = 8.2e-44
Identities = 60/87 (68%), Positives = 75/87 (86%)
Query: 218 SRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSY 277
SR+NHSEIE+RRR+KM YITELS MVP C A++RK DKLT+LRMAV H+K++RG +
Sbjct: 52 SRENHSEIERRRRNKMTQYITELSDMVPTCSALARKPDKLTILRMAVSHMKSMRGTGNKS 111
Query: 278 TEGHYKPAFLTDQELKHLILQAAEGFL 304
T+G YKP+FLT+QELKHLIL+AA+GFL
Sbjct: 112 TDGAYKPSFLTEQELKHLILEAADGFL 138
Score = 111 (44.1 bits), Expect = 8.2e-44, Sum P(4) = 8.2e-44
Identities = 27/87 (31%), Positives = 41/87 (47%)
Query: 439 MGLEESEDRKYSVIQCTGYLKSWAPAKMXXXXXXXXXXXXXXXXXXXLVAVGRVLADKTR 498
+G + + +Y+V+ CTGY+K+W PA M LVA+GR+ +
Sbjct: 255 LGPVKEGEAQYAVVHCTGYIKAWPPAGMTIPEEDADVGQGSKYC---LVAIGRLQVTSSP 311
Query: 499 ILNKQVNLR-PIQFLSRHALDGKFLFV 524
+ + P +FLSRH DG FV
Sbjct: 312 VCMDMNGMSVPTEFLSRHNSDGVITFV 338
Score = 109 (43.4 bits), Expect = 3.8e-13, Sum P(3) = 3.8e-13
Identities = 21/27 (77%), Positives = 24/27 (88%)
Query: 305 QNHSEIEKRRRDKMNTYITELSAMVPT 331
+NHSEIE+RRR+KM YITELS MVPT
Sbjct: 54 ENHSEIERRRRNKMTQYITELSDMVPT 80
Score = 85 (35.0 bits), Expect = 4.0e-41, Sum P(4) = 4.0e-41
Identities = 12/30 (40%), Positives = 22/30 (73%)
Query: 416 QQSDRKYSVIQCTGYLKSWAPAKMGLEESE 445
++ + +Y+V+ CTGY+K+W PA M + E +
Sbjct: 259 KEGEAQYAVVHCTGYIKAWPPAGMTIPEED 288
Score = 85 (35.0 bits), Expect = 1.0e-10, Sum P(3) = 1.0e-10
Identities = 17/44 (38%), Positives = 29/44 (65%)
Query: 168 QGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQV 211
Q E G + ++ +HP DV K++EQL +S+ S R++D+K+ V
Sbjct: 163 QSEWFGSTLYEQVHPDDVEKLREQLCTSENSMTGRILDLKTGTV 206
Score = 83 (34.3 bits), Expect = 8.2e-44, Sum P(4) = 8.2e-44
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 305 QNHSEIEKRRRDKMNTYITELSAMVPTLLPVKTADIPAEVS----RLCPGARRSFFCRMK 360
Q H + ++ R+++ T +E ++M +L +KT + E R+C G+RRSF CRM+
Sbjct: 174 QVHPDDVEKLREQLCT--SE-NSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRSFICRMR 230
Query: 361 C 361
C
Sbjct: 231 C 231
Score = 78 (32.5 bits), Expect = 8.2e-44, Sum P(4) = 8.2e-44
Identities = 16/45 (35%), Positives = 29/45 (64%)
Query: 517 LDGKFLFV-YQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNT 560
L G+ L V Y+F+ K ++ +++ F+NP++ +IEY+I NT
Sbjct: 380 LKGQVLSVMYRFRTKNREWMLIRTSSFTFQNPYSDEIEYIICTNT 424
Score = 41 (19.5 bits), Expect = 2.3e-26, Sum P(2) = 2.3e-26
Identities = 10/29 (34%), Positives = 20/29 (68%)
Query: 305 QNHSEIEKRRRDKMNTYITELSAM-VPTL 332
Q +E+E +RD +++Y +LS + VP++
Sbjct: 431 QQQAELEVHQRDGLSSY--DLSQVPVPSI 457
>UNIPROTKB|K7GNG1 [details] [associations]
symbol:ARNT "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 SMART:SM00086 TIGRFAMs:TIGR00229
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CU463875 Ensembl:ENSSSCT00000034834 Uniprot:K7GNG1
Length = 790
Score = 323 (118.8 bits), Expect = 8.9e-44, Sum P(4) = 8.9e-44
Identities = 60/88 (68%), Positives = 77/88 (87%)
Query: 217 VSRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHS 276
++R+NHSEIE+RRR+KM YITELS MVP C A++RK DKLT+LRMAV H+K++RG ++
Sbjct: 89 LARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVSHMKSLRGTGNT 148
Query: 277 YTEGHYKPAFLTDQELKHLILQAAEGFL 304
T+G YKP+FLTDQELKHLIL+AA+GFL
Sbjct: 149 STDGTYKPSFLTDQELKHLILEAADGFL 176
Score = 110 (43.8 bits), Expect = 1.9e-12, Sum P(3) = 1.9e-12
Identities = 21/27 (77%), Positives = 24/27 (88%)
Query: 305 QNHSEIEKRRRDKMNTYITELSAMVPT 331
+NHSEIE+RRR+KM YITELS MVPT
Sbjct: 92 ENHSEIERRRRNKMTAYITELSDMVPT 118
Score = 108 (43.1 bits), Expect = 8.9e-44, Sum P(4) = 8.9e-44
Identities = 26/87 (29%), Positives = 43/87 (49%)
Query: 439 MGLEESEDRKYSVIQCTGYLKSWAPAKMXXXXXXXXXXXXXXXXXXXLVAVGRVLADKTR 498
+G + + + V+ CTGY+K+W PA + LVA+GR+ A +
Sbjct: 293 LGSVKDGEPHFVVVHCTGYIKAWPPAGVSLPDDDPEAGQGSKFC---LVAIGRLQATSSP 349
Query: 499 ILNKQVNL-RPIQFLSRHALDGKFLFV 524
N+ +P +F+SRH ++G F FV
Sbjct: 350 NCTDMSNVCQPTEFISRHNIEGIFTFV 376
Score = 85 (35.0 bits), Expect = 8.9e-44, Sum P(4) = 8.9e-44
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 305 QNHSEIEKRRRDKMNTYITELSAMVPTLLPVKTADIPAEVS----RLCPGARRSFFCRMK 360
Q H + + R++++T +E +A+ +L +KT + E R+C G+RRSF CRM+
Sbjct: 212 QVHPDDVDKLREQLST--SE-NALTGRILDLKTGTVKKEGQQSSMRMCMGSRRSFICRMR 268
Query: 361 C 361
C
Sbjct: 269 C 269
Score = 84 (34.6 bits), Expect = 8.3e-10, Sum P(3) = 8.3e-10
Identities = 17/44 (38%), Positives = 29/44 (65%)
Query: 168 QGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQV 211
Q E G + +D +HP DV K++EQL +S+ + R++D+K+ V
Sbjct: 201 QSEWFGSTLYDQVHPDDVDKLREQLSTSENALTGRILDLKTGTV 244
Score = 75 (31.5 bits), Expect = 8.9e-44, Sum P(4) = 8.9e-44
Identities = 15/45 (33%), Positives = 30/45 (66%)
Query: 517 LDGKFLFV-YQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNT 560
L G+ L V ++F++K ++ +++ F+NP++ +IEY+I NT
Sbjct: 418 LKGQVLSVMFRFRSKNREWLWMRTSSFTFQNPYSDEIEYIICTNT 462
Score = 70 (29.7 bits), Expect = 7.5e-40, Sum P(4) = 7.5e-40
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 422 YSVIQCTGYLKSWAPAKMGLEESE 445
+ V+ CTGY+K+W PA + L + +
Sbjct: 303 FVVVHCTGYIKAWPPAGVSLPDDD 326
>UNIPROTKB|H9L0U2 [details] [associations]
symbol:ARNT "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0005667 GO:GO:0004871 SMART:SM00086
TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AADN02010491 EMBL:AADN02010492
EMBL:AADN02010493 Ensembl:ENSGALT00000029129 Uniprot:H9L0U2
Length = 788
Score = 323 (118.8 bits), Expect = 1.1e-43, Sum P(4) = 1.1e-43
Identities = 60/88 (68%), Positives = 77/88 (87%)
Query: 217 VSRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHS 276
++R+NHSEIE+RRR+KM YITELS MVP C A++RK DKLT+LRMAV H+K++RG ++
Sbjct: 93 LARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVSHMKSLRGTGNT 152
Query: 277 YTEGHYKPAFLTDQELKHLILQAAEGFL 304
T+G YKP+FLTDQELKHLIL+AA+GFL
Sbjct: 153 STDGTYKPSFLTDQELKHLILEAADGFL 180
Score = 110 (43.8 bits), Expect = 3.0e-12, Sum P(3) = 3.0e-12
Identities = 21/27 (77%), Positives = 24/27 (88%)
Query: 305 QNHSEIEKRRRDKMNTYITELSAMVPT 331
+NHSEIE+RRR+KM YITELS MVPT
Sbjct: 96 ENHSEIERRRRNKMTAYITELSDMVPT 122
Score = 106 (42.4 bits), Expect = 1.1e-43, Sum P(4) = 1.1e-43
Identities = 25/87 (28%), Positives = 41/87 (47%)
Query: 439 MGLEESEDRKYSVIQCTGYLKSWAPAKMXXXXXXXXXXXXXXXXXXXLVAVGRVLADKTR 498
+G + + Y V+ CTGY+K+W PA + LVA+GR+ +
Sbjct: 296 LGATKDGEPHYVVVHCTGYIKAWPPAGVSLPDDDPDAGQGSKFC---LVAIGRLQVTSSP 352
Query: 499 ILNKQVNL-RPIQFLSRHALDGKFLFV 524
N+ +P +F+SRH +G F F+
Sbjct: 353 NCTDMSNVCQPTEFISRHNTEGIFTFI 379
Score = 86 (35.3 bits), Expect = 1.1e-43, Sum P(4) = 1.1e-43
Identities = 21/60 (35%), Positives = 36/60 (60%)
Query: 305 QNHSEIEKRRRDKMNTYITELSAMVPTLLPVKTADIPAEVS---RLCPGARRSFFCRMKC 361
Q H + + R++++T +E +A+ +L +KT + E R+C G+RRSF CRM+C
Sbjct: 216 QVHPDDVGKLREQLST--SE-NALTGRILDLKTGTVKKEGQQSMRMCMGSRRSFICRMRC 272
Score = 86 (35.3 bits), Expect = 8.6e-10, Sum P(3) = 8.6e-10
Identities = 17/44 (38%), Positives = 29/44 (65%)
Query: 168 QGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQV 211
Q E G + +D +HP DV K++EQL +S+ + R++D+K+ V
Sbjct: 205 QSEWFGSTLYDQVHPDDVGKLREQLSTSENALTGRILDLKTGTV 248
Score = 75 (31.5 bits), Expect = 1.1e-43, Sum P(4) = 1.1e-43
Identities = 15/45 (33%), Positives = 30/45 (66%)
Query: 517 LDGKFLFV-YQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNT 560
L G+ L V ++F++K ++ +++ F+NP++ +IEY+I NT
Sbjct: 421 LKGQVLSVMFRFRSKNREWLWMRTSSFTFQNPYSDEIEYIICTNT 465
Score = 74 (31.1 bits), Expect = 2.2e-40, Sum P(4) = 2.2e-40
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 422 YSVIQCTGYLKSWAPAKMGLEESE 445
Y V+ CTGY+K+W PA + L + +
Sbjct: 306 YVVVHCTGYIKAWPPAGVSLPDDD 329
>RGD|2154 [details] [associations]
symbol:Arnt2 "aryl hydrocarbon receptor nuclear translocator 2"
species:10116 "Rattus norvegicus" [GO:0001666 "response to hypoxia"
evidence=IEP;ISO] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISO] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005667
"transcription factor complex" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0007417 "central nervous system
development" evidence=IEA;ISO] [GO:0008284 "positive regulation of
cell proliferation" evidence=IMP] [GO:0017162 "aryl hydrocarbon
receptor binding" evidence=IEA;ISO] [GO:0032355 "response to
estradiol stimulus" evidence=IEP] [GO:0042221 "response to chemical
stimulus" evidence=TAS] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0046982 "protein heterodimerization activity"
evidence=ISO;IDA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010
Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112
PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 RGD:2154 GO:GO:0005634 GO:GO:0005737 GO:GO:0043066
GO:GO:0032355 GO:GO:0003677 GO:GO:0008284 GO:GO:0001701 GO:GO:0001666
GO:GO:0045944 GO:GO:0007417 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 GO:GO:0046982 SMART:SM00086 TIGRFAMs:TIGR00229
eggNOG:NOG293303 GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10
SUPFAM:SSF47459 CTD:9915 HOGENOM:HOG000234380 HOVERGEN:HBG000164
KO:K15589 OrthoDB:EOG4K3KVQ EMBL:U61157 EMBL:U61405 EMBL:AY264366
EMBL:DQ223732 IPI:IPI00211044 IPI:IPI00829430 RefSeq:NP_036913.3
UniGene:Rn.10518 HSSP:P27540 ProteinModelPortal:Q78E60 SMR:Q78E60
STRING:Q78E60 PhosphoSite:Q78E60 Ensembl:ENSRNOT00000017636
GeneID:25243 KEGG:rno:25243 UCSC:RGD:2154 InParanoid:Q78E60
NextBio:605835 Genevestigator:Q78E60 Uniprot:Q78E60
Length = 712
Score = 318 (117.0 bits), Expect = 1.2e-43, Sum P(4) = 1.2e-43
Identities = 60/87 (68%), Positives = 75/87 (86%)
Query: 218 SRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSY 277
SR+NHSEIE+RRR+KM YITELS MVP C A++RK DKLT+LRMAV H+K++RG +
Sbjct: 64 SRENHSEIERRRRNKMTQYITELSDMVPTCSALARKPDKLTILRMAVSHMKSMRGTGNKS 123
Query: 278 TEGHYKPAFLTDQELKHLILQAAEGFL 304
T+G YKP+FLT+QELKHLIL+AA+GFL
Sbjct: 124 TDGAYKPSFLTEQELKHLILEAADGFL 150
Score = 111 (44.1 bits), Expect = 1.2e-43, Sum P(4) = 1.2e-43
Identities = 27/87 (31%), Positives = 41/87 (47%)
Query: 439 MGLEESEDRKYSVIQCTGYLKSWAPAKMXXXXXXXXXXXXXXXXXXXLVAVGRVLADKTR 498
+G + + +Y+V+ CTGY+K+W PA M LVA+GR+ +
Sbjct: 267 LGPVKEGEAQYAVVHCTGYIKAWPPAGMSIPEEDADVGQGSKYC---LVAIGRLQVTSSP 323
Query: 499 ILNKQVNLR-PIQFLSRHALDGKFLFV 524
+ + P +FLSRH DG FV
Sbjct: 324 VCMDMSGMSVPTEFLSRHNSDGIITFV 350
Score = 109 (43.4 bits), Expect = 5.0e-13, Sum P(3) = 5.0e-13
Identities = 21/27 (77%), Positives = 24/27 (88%)
Query: 305 QNHSEIEKRRRDKMNTYITELSAMVPT 331
+NHSEIE+RRR+KM YITELS MVPT
Sbjct: 66 ENHSEIERRRRNKMTQYITELSDMVPT 92
Score = 87 (35.7 bits), Expect = 3.5e-41, Sum P(4) = 3.5e-41
Identities = 12/30 (40%), Positives = 22/30 (73%)
Query: 416 QQSDRKYSVIQCTGYLKSWAPAKMGLEESE 445
++ + +Y+V+ CTGY+K+W PA M + E +
Sbjct: 271 KEGEAQYAVVHCTGYIKAWPPAGMSIPEED 300
Score = 85 (35.0 bits), Expect = 1.3e-10, Sum P(3) = 1.3e-10
Identities = 17/44 (38%), Positives = 29/44 (65%)
Query: 168 QGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQV 211
Q E G + ++ +HP DV K++EQL +S+ S R++D+K+ V
Sbjct: 175 QSEWFGSTLYEQVHPDDVEKLREQLCTSENSMTGRILDLKTGTV 218
Score = 83 (34.3 bits), Expect = 1.2e-43, Sum P(4) = 1.2e-43
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 305 QNHSEIEKRRRDKMNTYITELSAMVPTLLPVKTADIPAEVS----RLCPGARRSFFCRMK 360
Q H + ++ R+++ T +E ++M +L +KT + E R+C G+RRSF CRM+
Sbjct: 186 QVHPDDVEKLREQLCT--SE-NSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRSFICRMR 242
Query: 361 C 361
C
Sbjct: 243 C 243
Score = 77 (32.2 bits), Expect = 1.2e-43, Sum P(4) = 1.2e-43
Identities = 16/45 (35%), Positives = 29/45 (64%)
Query: 517 LDGKFLFV-YQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNT 560
L G+ L V Y+F+ K ++ +++ F+NP++ +IEY+I NT
Sbjct: 392 LKGQVLSVMYRFRTKNREWLLIRTSSFTFQNPYSDEIEYVICTNT 436
Score = 44 (20.5 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 305 QNHSEIEKRRRDKMNTYITELSAM-VPTL-LPVKTADIPAE 343
Q +E+E +RD +++Y +LS + VP L V A P E
Sbjct: 443 QQQAELEVHQRDGLSSY--DLSQVPVPNLPTGVHEAGKPVE 481
>MGI|MGI:107188 [details] [associations]
symbol:Arnt2 "aryl hydrocarbon receptor nuclear translocator
2" species:10090 "Mus musculus" [GO:0001666 "response to hypoxia"
evidence=ISO;TAS] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;NAS] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISA] [GO:0007165 "signal
transduction" evidence=NAS] [GO:0007417 "central nervous system
development" evidence=IMP] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISO] [GO:0009410 "response to xenobiotic
stimulus" evidence=TAS] [GO:0009636 "response to toxic substance"
evidence=TAS] [GO:0017162 "aryl hydrocarbon receptor binding"
evidence=IPI] [GO:0043066 "negative regulation of apoptotic
process" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IGI;IDA] [GO:0046982 "protein heterodimerization activity"
evidence=ISO;IPI] [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 MGI:MGI:107188 GO:GO:0005737
GO:GO:0007165 GO:GO:0043066 GO:GO:0032355 GO:GO:0003677
GO:GO:0008284 GO:GO:0009636 GO:GO:0001701 GO:GO:0001666
GO:GO:0045944 GO:GO:0007417 GO:GO:0003700 GO:GO:0006351
GO:GO:0005667 GO:GO:0004871 GO:GO:0046982 SMART:SM00086
TIGRFAMs:TIGR00229 eggNOG:NOG293303 GeneTree:ENSGT00650000092935
GO:GO:0009410 Gene3D:4.10.280.10 SUPFAM:SSF47459 CTD:9915
HOGENOM:HOG000234380 HOVERGEN:HBG000164 KO:K15589 OMA:VCMDMSG
OrthoDB:EOG4K3KVQ EMBL:D63644 EMBL:AB093225 EMBL:BC054546
IPI:IPI00403978 IPI:IPI00828407 RefSeq:NP_031514.2 UniGene:Mm.38594
ProteinModelPortal:Q61324 SMR:Q61324 IntAct:Q61324 STRING:Q61324
PhosphoSite:Q61324 PRIDE:Q61324 Ensembl:ENSMUST00000085077
GeneID:11864 KEGG:mmu:11864 UCSC:uc009ief.1 UCSC:uc009ieh.1
InParanoid:Q61324 NextBio:279871 Bgee:Q61324 CleanEx:MM_ARNT2
Genevestigator:Q61324 GermOnline:ENSMUSG00000015709 Uniprot:Q61324
Length = 712
Score = 318 (117.0 bits), Expect = 1.2e-43, Sum P(4) = 1.2e-43
Identities = 60/87 (68%), Positives = 75/87 (86%)
Query: 218 SRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSY 277
SR+NHSEIE+RRR+KM YITELS MVP C A++RK DKLT+LRMAV H+K++RG +
Sbjct: 64 SRENHSEIERRRRNKMTQYITELSDMVPTCSALARKPDKLTILRMAVSHMKSMRGTGNKS 123
Query: 278 TEGHYKPAFLTDQELKHLILQAAEGFL 304
T+G YKP+FLT+QELKHLIL+AA+GFL
Sbjct: 124 TDGAYKPSFLTEQELKHLILEAADGFL 150
Score = 111 (44.1 bits), Expect = 1.2e-43, Sum P(4) = 1.2e-43
Identities = 27/87 (31%), Positives = 41/87 (47%)
Query: 439 MGLEESEDRKYSVIQCTGYLKSWAPAKMXXXXXXXXXXXXXXXXXXXLVAVGRVLADKTR 498
+G + + +Y+V+ CTGY+K+W PA M LVA+GR+ +
Sbjct: 267 LGPVKEGEAQYAVVHCTGYIKAWPPAGMTIPEEDADVGQGSKYC---LVAIGRLQVTSSP 323
Query: 499 ILNKQVNLR-PIQFLSRHALDGKFLFV 524
+ + P +FLSRH DG FV
Sbjct: 324 VCMDMSGMSVPTEFLSRHNSDGIITFV 350
Score = 109 (43.4 bits), Expect = 5.0e-13, Sum P(3) = 5.0e-13
Identities = 21/27 (77%), Positives = 24/27 (88%)
Query: 305 QNHSEIEKRRRDKMNTYITELSAMVPT 331
+NHSEIE+RRR+KM YITELS MVPT
Sbjct: 66 ENHSEIERRRRNKMTQYITELSDMVPT 92
Score = 85 (35.0 bits), Expect = 5.7e-41, Sum P(4) = 5.7e-41
Identities = 12/30 (40%), Positives = 22/30 (73%)
Query: 416 QQSDRKYSVIQCTGYLKSWAPAKMGLEESE 445
++ + +Y+V+ CTGY+K+W PA M + E +
Sbjct: 271 KEGEAQYAVVHCTGYIKAWPPAGMTIPEED 300
Score = 85 (35.0 bits), Expect = 1.3e-10, Sum P(3) = 1.3e-10
Identities = 17/44 (38%), Positives = 29/44 (65%)
Query: 168 QGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQV 211
Q E G + ++ +HP DV K++EQL +S+ S R++D+K+ V
Sbjct: 175 QSEWFGSTLYEQVHPDDVEKLREQLCTSENSMTGRILDLKTGTV 218
Score = 83 (34.3 bits), Expect = 1.2e-43, Sum P(4) = 1.2e-43
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 305 QNHSEIEKRRRDKMNTYITELSAMVPTLLPVKTADIPAEVS----RLCPGARRSFFCRMK 360
Q H + ++ R+++ T +E ++M +L +KT + E R+C G+RRSF CRM+
Sbjct: 186 QVHPDDVEKLREQLCT--SE-NSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRSFICRMR 242
Query: 361 C 361
C
Sbjct: 243 C 243
Score = 77 (32.2 bits), Expect = 1.2e-43, Sum P(4) = 1.2e-43
Identities = 16/45 (35%), Positives = 29/45 (64%)
Query: 517 LDGKFLFV-YQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNT 560
L G+ L V Y+F+ K ++ +++ F+NP++ +IEY+I NT
Sbjct: 392 LKGQVLSVMYRFRTKNREWLLIRTSSFTFQNPYSDEIEYVICTNT 436
Score = 42 (19.8 bits), Expect = 2.0e-26, Sum P(2) = 2.0e-26
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 305 QNHSEIEKRRRDKMNTYITELSAM-VPTL 332
Q +E+E +RD +++Y +LS + VP L
Sbjct: 443 QQQAELEVHQRDGLSSY--DLSQVPVPNL 469
>UNIPROTKB|Q9HBZ2 [details] [associations]
symbol:ARNT2 "Aryl hydrocarbon receptor nuclear
translocator 2" species:9606 "Homo sapiens" [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=IEA] [GO:0032355
"response to estradiol stimulus" evidence=IEA] [GO:0043066
"negative regulation of apoptotic process" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=ISS;IPI] [GO:0007417 "central
nervous system development" evidence=ISS] [GO:0001701 "in utero
embryonic development" evidence=ISS] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0001666 "response to hypoxia" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0017162 "aryl
hydrocarbon receptor binding" evidence=ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IDA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005634
GO:GO:0005737 GO:GO:0045893 GO:GO:0043066 GO:GO:0032355
GO:GO:0003677 GO:GO:0008284 GO:GO:0001701 GO:GO:0001666
GO:GO:0045944 GO:GO:0007417 GO:GO:0003700 GO:GO:0006351
GO:GO:0005667 GO:GO:0004871 EMBL:CH471136 GO:GO:0046982
SMART:SM00086 TIGRFAMs:TIGR00229 eggNOG:NOG293303
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF185610 EMBL:AF185593
EMBL:AF185594 EMBL:AF185595 EMBL:AF185596 EMBL:AF185597
EMBL:AF185598 EMBL:AF185599 EMBL:AF185600 EMBL:AF185601
EMBL:AF185602 EMBL:AF185603 EMBL:AF185604 EMBL:AF185605
EMBL:AF185606 EMBL:AF185607 EMBL:AF185608 EMBL:AF185609
EMBL:AB002305 EMBL:AK295763 EMBL:BX647212 EMBL:BC036099
IPI:IPI00478506 IPI:IPI00796054 RefSeq:NP_055677.3
UniGene:Hs.459070 ProteinModelPortal:Q9HBZ2 SMR:Q9HBZ2
IntAct:Q9HBZ2 MINT:MINT-2867815 STRING:Q9HBZ2 PhosphoSite:Q9HBZ2
DMDM:125987793 PRIDE:Q9HBZ2 DNASU:9915 Ensembl:ENST00000303329
Ensembl:ENST00000527771 Ensembl:ENST00000533983 GeneID:9915
KEGG:hsa:9915 UCSC:uc002bfr.3 CTD:9915 GeneCards:GC15P080696
H-InvDB:HIX0012493 HGNC:HGNC:16876 HPA:CAB005081 HPA:HPA001056
MIM:606036 neXtProt:NX_Q9HBZ2 PharmGKB:PA24995 HOGENOM:HOG000234380
HOVERGEN:HBG000164 InParanoid:Q9HBZ2 KO:K15589 OMA:VCMDMSG
OrthoDB:EOG4K3KVQ ChiTaRS:ARNT2 GenomeRNAi:9915 NextBio:37404
ArrayExpress:Q9HBZ2 Bgee:Q9HBZ2 CleanEx:HS_ARNT2
Genevestigator:Q9HBZ2 GermOnline:ENSG00000172379 GO:GO:0017162
Uniprot:Q9HBZ2
Length = 717
Score = 318 (117.0 bits), Expect = 1.2e-43, Sum P(4) = 1.2e-43
Identities = 60/87 (68%), Positives = 75/87 (86%)
Query: 218 SRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSY 277
SR+NHSEIE+RRR+KM YITELS MVP C A++RK DKLT+LRMAV H+K++RG +
Sbjct: 64 SRENHSEIERRRRNKMTQYITELSDMVPTCSALARKPDKLTILRMAVSHMKSMRGTGNKS 123
Query: 278 TEGHYKPAFLTDQELKHLILQAAEGFL 304
T+G YKP+FLT+QELKHLIL+AA+GFL
Sbjct: 124 TDGAYKPSFLTEQELKHLILEAADGFL 150
Score = 110 (43.8 bits), Expect = 1.2e-43, Sum P(4) = 1.2e-43
Identities = 27/87 (31%), Positives = 41/87 (47%)
Query: 439 MGLEESEDRKYSVIQCTGYLKSWAPAKMXXXXXXXXXXXXXXXXXXXLVAVGRVLADKTR 498
+G + + +Y+V+ CTGY+K+W PA M LVA+GR+ +
Sbjct: 267 LGPVKEGEAQYAVVHCTGYIKAWPPAGMTIPEEDADVGQGSKYC---LVAIGRLQVTSSP 323
Query: 499 ILNKQVNLR-PIQFLSRHALDGKFLFV 524
+ + P +FLSRH DG FV
Sbjct: 324 VCMDMNGMSVPTEFLSRHNSDGIITFV 350
Score = 109 (43.4 bits), Expect = 5.2e-13, Sum P(3) = 5.2e-13
Identities = 21/27 (77%), Positives = 24/27 (88%)
Query: 305 QNHSEIEKRRRDKMNTYITELSAMVPT 331
+NHSEIE+RRR+KM YITELS MVPT
Sbjct: 66 ENHSEIERRRRNKMTQYITELSDMVPT 92
Score = 85 (35.0 bits), Expect = 4.8e-41, Sum P(4) = 4.8e-41
Identities = 12/30 (40%), Positives = 22/30 (73%)
Query: 416 QQSDRKYSVIQCTGYLKSWAPAKMGLEESE 445
++ + +Y+V+ CTGY+K+W PA M + E +
Sbjct: 271 KEGEAQYAVVHCTGYIKAWPPAGMTIPEED 300
Score = 85 (35.0 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 17/44 (38%), Positives = 29/44 (65%)
Query: 168 QGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQV 211
Q E G + ++ +HP DV K++EQL +S+ S R++D+K+ V
Sbjct: 175 QSEWFGSTLYEQVHPDDVEKLREQLCTSENSMTGRILDLKTGTV 218
Score = 83 (34.3 bits), Expect = 1.2e-43, Sum P(4) = 1.2e-43
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 305 QNHSEIEKRRRDKMNTYITELSAMVPTLLPVKTADIPAEVS----RLCPGARRSFFCRMK 360
Q H + ++ R+++ T +E ++M +L +KT + E R+C G+RRSF CRM+
Sbjct: 186 QVHPDDVEKLREQLCT--SE-NSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRSFICRMR 242
Query: 361 C 361
C
Sbjct: 243 C 243
Score = 78 (32.5 bits), Expect = 1.2e-43, Sum P(4) = 1.2e-43
Identities = 16/45 (35%), Positives = 29/45 (64%)
Query: 517 LDGKFLFV-YQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNT 560
L G+ L V Y+F+ K ++ +++ F+NP++ +IEY+I NT
Sbjct: 392 LKGQVLSVMYRFRTKNREWMLIRTSSFTFQNPYSDEIEYIICTNT 436
Score = 42 (19.8 bits), Expect = 2.0e-26, Sum P(2) = 2.0e-26
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 305 QNHSEIEKRRRDKMNTYITELSAM-VPTL 332
Q +E+E +RD +++Y +LS + VP L
Sbjct: 443 QQQAELEVHQRDGLSSY--DLSQVPVPNL 469
>UNIPROTKB|F1MYI1 [details] [associations]
symbol:ARNT "Aryl hydrocarbon receptor nuclear
translocator" species:9913 "Bos taurus" [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0046886 "positive
regulation of hormone biosynthetic process" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043619 "regulation of
transcription from RNA polymerase II promoter in response to
oxidative stress" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0033235 "positive regulation of protein
sumoylation" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0017162 "aryl hydrocarbon receptor binding"
evidence=IEA] [GO:0010575 "positive regulation vascular endothelial
growth factor production" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0004874 "aryl hydrocarbon receptor activity"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0001892 "embryonic placenta development"
evidence=IEA] [GO:0001666 "response to hypoxia" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005737
GO:GO:0030154 GO:GO:0043565 GO:GO:0001666 GO:GO:0045944
GO:GO:0010575 GO:GO:0005667 GO:GO:0003705 GO:GO:0003713
SMART:SM00086 TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0033235 GO:GO:0004874
IPI:IPI00701584 OMA:AGQGSKF GO:GO:0001892 GO:GO:0046886
GO:GO:0043619 EMBL:DAAA02007256 Ensembl:ENSBTAT00000028023
ArrayExpress:F1MYI1 Uniprot:F1MYI1
Length = 782
Score = 323 (118.8 bits), Expect = 1.3e-43, Sum P(4) = 1.3e-43
Identities = 60/88 (68%), Positives = 77/88 (87%)
Query: 217 VSRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHS 276
++R+NHSEIE+RRR+KM YITELS MVP C A++RK DKLT+LRMAV H+K++RG ++
Sbjct: 81 LARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVSHMKSLRGTGNT 140
Query: 277 YTEGHYKPAFLTDQELKHLILQAAEGFL 304
T+G YKP+FLTDQELKHLIL+AA+GFL
Sbjct: 141 STDGTYKPSFLTDQELKHLILEAADGFL 168
Score = 110 (43.8 bits), Expect = 2.9e-12, Sum P(3) = 2.9e-12
Identities = 21/27 (77%), Positives = 24/27 (88%)
Query: 305 QNHSEIEKRRRDKMNTYITELSAMVPT 331
+NHSEIE+RRR+KM YITELS MVPT
Sbjct: 84 ENHSEIERRRRNKMTAYITELSDMVPT 110
Score = 106 (42.4 bits), Expect = 1.3e-43, Sum P(4) = 1.3e-43
Identities = 27/88 (30%), Positives = 44/88 (50%)
Query: 440 GLEESEDRK--YSVIQCTGYLKSWAPAKMXXXXXXXXXXXXXXXXXXXLVAVGRVLADKT 497
GL ++D + + V+ CTGY+K+W PA + LVA+GR+ +
Sbjct: 284 GLGSAKDGEPHFVVVHCTGYIKAWPPAGVSLPDDDPEAGQGSKFC---LVAIGRLQVTSS 340
Query: 498 RILNKQVNL-RPIQFLSRHALDGKFLFV 524
N+ +P +F+SRH ++G F FV
Sbjct: 341 PNCTDMSNVCQPTEFISRHNIEGIFTFV 368
Score = 85 (35.0 bits), Expect = 1.3e-43, Sum P(4) = 1.3e-43
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 305 QNHSEIEKRRRDKMNTYITELSAMVPTLLPVKTADIPAEVS----RLCPGARRSFFCRMK 360
Q H + + R++++T +E +A+ +L +KT + E R+C G+RRSF CRM+
Sbjct: 204 QVHPDDVDKLREQLST--SE-NALTGRILDLKTGTVKKEGQQSSMRMCMGSRRSFICRMR 260
Query: 361 C 361
C
Sbjct: 261 C 261
Score = 84 (34.6 bits), Expect = 1.3e-09, Sum P(3) = 1.3e-09
Identities = 17/44 (38%), Positives = 29/44 (65%)
Query: 168 QGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQV 211
Q E G + +D +HP DV K++EQL +S+ + R++D+K+ V
Sbjct: 193 QSEWFGSTLYDQVHPDDVDKLREQLSTSENALTGRILDLKTGTV 236
Score = 75 (31.5 bits), Expect = 1.3e-43, Sum P(4) = 1.3e-43
Identities = 15/45 (33%), Positives = 30/45 (66%)
Query: 517 LDGKFLFV-YQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNT 560
L G+ L V ++F++K ++ +++ F+NP++ +IEY+I NT
Sbjct: 410 LKGQVLSVMFRFRSKNREWLWMRTSSFTFQNPYSDEIEYIICTNT 454
Score = 70 (29.7 bits), Expect = 6.8e-40, Sum P(4) = 6.8e-40
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 422 YSVIQCTGYLKSWAPAKMGLEESE 445
+ V+ CTGY+K+W PA + L + +
Sbjct: 295 FVVVHCTGYIKAWPPAGVSLPDDD 318
>UNIPROTKB|F8WAP6 [details] [associations]
symbol:ARNT "Aryl hydrocarbon receptor nuclear
translocator" species:9606 "Homo sapiens" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0005667 GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL355860 HGNC:HGNC:700
ChiTaRS:ARNT IPI:IPI00965109 ProteinModelPortal:F8WAP6 SMR:F8WAP6
Ensembl:ENST00000354396 UCSC:uc009wmc.2 ArrayExpress:F8WAP6
Bgee:F8WAP6 Uniprot:F8WAP6
Length = 787
Score = 324 (119.1 bits), Expect = 1.3e-43, Sum P(4) = 1.3e-43
Identities = 60/88 (68%), Positives = 77/88 (87%)
Query: 217 VSRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHS 276
++R+NHSEIE+RRR+KM YITELS MVP C A++RK DKLT+LRMAV H+K++RG ++
Sbjct: 89 LARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVSHMKSLRGTGNT 148
Query: 277 YTEGHYKPAFLTDQELKHLILQAAEGFL 304
T+G YKP+FLTDQELKHLIL+AA+GFL
Sbjct: 149 STDGSYKPSFLTDQELKHLILEAADGFL 176
Score = 110 (43.8 bits), Expect = 4.7e-12, Sum P(3) = 4.7e-12
Identities = 21/27 (77%), Positives = 24/27 (88%)
Query: 305 QNHSEIEKRRRDKMNTYITELSAMVPT 331
+NHSEIE+RRR+KM YITELS MVPT
Sbjct: 92 ENHSEIERRRRNKMTAYITELSDMVPT 118
Score = 104 (41.7 bits), Expect = 1.3e-43, Sum P(4) = 1.3e-43
Identities = 25/87 (28%), Positives = 42/87 (48%)
Query: 439 MGLEESEDRKYSVIQCTGYLKSWAPAKMXXXXXXXXXXXXXXXXXXXLVAVGRVLADKTR 498
+G + + + V+ CTGY+K+W PA + LVA+GR+ +
Sbjct: 293 LGSVKDGEPHFVVVHCTGYIKAWPPAGVSLPDDDPEAGQGSKFC---LVAIGRLQVTSSP 349
Query: 499 ILNKQVNL-RPIQFLSRHALDGKFLFV 524
N+ +P +F+SRH ++G F FV
Sbjct: 350 NCTDMSNVCQPTEFISRHNIEGIFTFV 376
Score = 85 (35.0 bits), Expect = 1.3e-43, Sum P(4) = 1.3e-43
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 305 QNHSEIEKRRRDKMNTYITELSAMVPTLLPVKTADIPAEVS----RLCPGARRSFFCRMK 360
Q H + + R++++T +E +A+ +L +KT + E R+C G+RRSF CRM+
Sbjct: 212 QVHPDDVDKLREQLST--SE-NALTGRILDLKTGTVKKEGQQSSMRMCMGSRRSFICRMR 268
Query: 361 C 361
C
Sbjct: 269 C 269
Score = 84 (34.6 bits), Expect = 2.2e-09, Sum P(3) = 2.2e-09
Identities = 17/44 (38%), Positives = 29/44 (65%)
Query: 168 QGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQV 211
Q E G + +D +HP DV K++EQL +S+ + R++D+K+ V
Sbjct: 201 QSEWFGSTLYDQVHPDDVDKLREQLSTSENALTGRILDLKTGTV 244
Score = 75 (31.5 bits), Expect = 1.3e-43, Sum P(4) = 1.3e-43
Identities = 15/45 (33%), Positives = 30/45 (66%)
Query: 517 LDGKFLFV-YQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNT 560
L G+ L V ++F++K ++ +++ F+NP++ +IEY+I NT
Sbjct: 418 LKGQVLSVMFRFRSKNQEWLWMRTSSFTFQNPYSDEIEYIICTNT 462
Score = 70 (29.7 bits), Expect = 4.3e-40, Sum P(4) = 4.3e-40
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 422 YSVIQCTGYLKSWAPAKMGLEESE 445
+ V+ CTGY+K+W PA + L + +
Sbjct: 303 FVVVHCTGYIKAWPPAGVSLPDDD 326
>UNIPROTKB|P27540 [details] [associations]
symbol:ARNT "Aryl hydrocarbon receptor nuclear
translocator" species:9606 "Homo sapiens" [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0001892 "embryonic
placenta development" evidence=IEA] [GO:0003713 "transcription
coactivator activity" evidence=IEA] [GO:0004874 "aryl hydrocarbon
receptor activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0033235 "positive regulation of protein sumoylation"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=TAS] [GO:0006351 "transcription, DNA-dependent"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0033554
"cellular response to stress" evidence=TAS] [GO:0061418 "regulation
of transcription from RNA polymerase II promoter in response to
hypoxia" evidence=TAS] [GO:0071456 "cellular response to hypoxia"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0003705 "RNA polymerase II distal enhancer sequence-specific
DNA binding transcription factor activity" evidence=IDA]
[GO:0042789 "mRNA transcription from RNA polymerase II promoter"
evidence=IC] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0017162 "aryl hydrocarbon receptor binding"
evidence=IPI] [GO:0046982 "protein heterodimerization activity"
evidence=IPI] [GO:0001666 "response to hypoxia" evidence=IDA]
[GO:0001938 "positive regulation of endothelial cell proliferation"
evidence=IC] [GO:0005634 "nucleus" evidence=IDA] [GO:0010575
"positive regulation vascular endothelial growth factor production"
evidence=IDA] [GO:0030949 "positive regulation of vascular
endothelial growth factor receptor signaling pathway" evidence=IC]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0043619 "regulation of transcription from RNA
polymerase II promoter in response to oxidative stress"
evidence=IDA] [GO:0045648 "positive regulation of erythrocyte
differentiation" evidence=IC] [GO:0045821 "positive regulation of
glycolysis" evidence=IC] [GO:0046886 "positive regulation of
hormone biosynthetic process" evidence=IDA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610
Reactome:REACT_120956 GO:GO:0005737 GO:GO:0045893 GO:GO:0005654
GO:GO:0030154 GO:GO:0001938 Pathway_Interaction_DB:hif1_tfpathway
GO:GO:0043565 GO:GO:0045944 GO:GO:0010575 GO:GO:0003700
GO:GO:0045821 GO:GO:0005667 GO:GO:0003713 GO:GO:0045648
SMART:SM00086 TIGRFAMs:TIGR00229 eggNOG:NOG293303
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0033235 GO:GO:0004874
Pathway_Interaction_DB:vegfr1_2_pathway EMBL:CH471121 GO:GO:0030949
HOGENOM:HOG000234380 HOVERGEN:HBG000164 CTD:405 KO:K09097
OrthoDB:EOG4R7V9H EMBL:M69238 EMBL:Y18859 EMBL:AJ251863
EMBL:AJ404851 EMBL:AJ404852 EMBL:AJ404853 EMBL:AJ404854
EMBL:AK290177 EMBL:AK293027 EMBL:AL834279 EMBL:AY430083
EMBL:AL355860 IPI:IPI00218287 IPI:IPI00514749 IPI:IPI00922490
PIR:I59550 RefSeq:NP_001184254.1 RefSeq:NP_001659.1
RefSeq:NP_848514.1 UniGene:Hs.632446 PDB:1D7G PDB:1X0O PDB:2A24
PDB:2ARN PDB:2B02 PDB:2HV1 PDB:2K7S PDB:3F1N PDB:3F1O PDB:3F1P
PDB:3H7W PDB:3H82 PDB:4H6J PDBsum:1D7G PDBsum:1X0O PDBsum:2A24
PDBsum:2ARN PDBsum:2B02 PDBsum:2HV1 PDBsum:2K7S PDBsum:3F1N
PDBsum:3F1O PDBsum:3F1P PDBsum:3H7W PDBsum:3H82 PDBsum:4H6J
ProteinModelPortal:P27540 SMR:P27540 DIP:DIP-30886N IntAct:P27540
MINT:MINT-1196758 STRING:P27540 PhosphoSite:P27540 DMDM:114163
PaxDb:P27540 PRIDE:P27540 DNASU:405 Ensembl:ENST00000358595
Ensembl:ENST00000505755 Ensembl:ENST00000515192 GeneID:405
KEGG:hsa:405 UCSC:uc001evr.2 UCSC:uc001evs.2 UCSC:uc009wmb.2
GeneCards:GC01M150782 HGNC:HGNC:700 HPA:CAB004318 HPA:HPA001759
MIM:126110 neXtProt:NX_P27540 PharmGKB:PA24994 OMA:AGQGSKF
Pathway_Interaction_DB:hif1apathway ChEMBL:CHEMBL5618 ChiTaRS:ARNT
EvolutionaryTrace:P27540 GenomeRNAi:405 NextBio:1693
ArrayExpress:P27540 Bgee:P27540 CleanEx:HS_ARNT
Genevestigator:P27540 GermOnline:ENSG00000143437 GO:GO:0001892
GO:GO:0042789 GO:GO:0046886 GO:GO:0061418 GO:GO:0043619
Uniprot:P27540
Length = 789
Score = 324 (119.1 bits), Expect = 1.4e-43, Sum P(4) = 1.4e-43
Identities = 60/88 (68%), Positives = 77/88 (87%)
Query: 217 VSRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHS 276
++R+NHSEIE+RRR+KM YITELS MVP C A++RK DKLT+LRMAV H+K++RG ++
Sbjct: 89 LARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVSHMKSLRGTGNT 148
Query: 277 YTEGHYKPAFLTDQELKHLILQAAEGFL 304
T+G YKP+FLTDQELKHLIL+AA+GFL
Sbjct: 149 STDGSYKPSFLTDQELKHLILEAADGFL 176
Score = 110 (43.8 bits), Expect = 4.7e-12, Sum P(3) = 4.7e-12
Identities = 21/27 (77%), Positives = 24/27 (88%)
Query: 305 QNHSEIEKRRRDKMNTYITELSAMVPT 331
+NHSEIE+RRR+KM YITELS MVPT
Sbjct: 92 ENHSEIERRRRNKMTAYITELSDMVPT 118
Score = 104 (41.7 bits), Expect = 1.4e-43, Sum P(4) = 1.4e-43
Identities = 25/87 (28%), Positives = 42/87 (48%)
Query: 439 MGLEESEDRKYSVIQCTGYLKSWAPAKMXXXXXXXXXXXXXXXXXXXLVAVGRVLADKTR 498
+G + + + V+ CTGY+K+W PA + LVA+GR+ +
Sbjct: 293 LGSVKDGEPHFVVVHCTGYIKAWPPAGVSLPDDDPEAGQGSKFC---LVAIGRLQVTSSP 349
Query: 499 ILNKQVNL-RPIQFLSRHALDGKFLFV 524
N+ +P +F+SRH ++G F FV
Sbjct: 350 NCTDMSNVCQPTEFISRHNIEGIFTFV 376
Score = 85 (35.0 bits), Expect = 1.4e-43, Sum P(4) = 1.4e-43
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 305 QNHSEIEKRRRDKMNTYITELSAMVPTLLPVKTADIPAEVS----RLCPGARRSFFCRMK 360
Q H + + R++++T +E +A+ +L +KT + E R+C G+RRSF CRM+
Sbjct: 212 QVHPDDVDKLREQLST--SE-NALTGRILDLKTGTVKKEGQQSSMRMCMGSRRSFICRMR 268
Query: 361 C 361
C
Sbjct: 269 C 269
Score = 84 (34.6 bits), Expect = 2.3e-09, Sum P(3) = 2.3e-09
Identities = 17/44 (38%), Positives = 29/44 (65%)
Query: 168 QGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQV 211
Q E G + +D +HP DV K++EQL +S+ + R++D+K+ V
Sbjct: 201 QSEWFGSTLYDQVHPDDVDKLREQLSTSENALTGRILDLKTGTV 244
Score = 75 (31.5 bits), Expect = 1.4e-43, Sum P(4) = 1.4e-43
Identities = 15/45 (33%), Positives = 30/45 (66%)
Query: 517 LDGKFLFV-YQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNT 560
L G+ L V ++F++K ++ +++ F+NP++ +IEY+I NT
Sbjct: 418 LKGQVLSVMFRFRSKNQEWLWMRTSSFTFQNPYSDEIEYIICTNT 462
Score = 70 (29.7 bits), Expect = 4.4e-40, Sum P(4) = 4.4e-40
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 422 YSVIQCTGYLKSWAPAKMGLEESE 445
+ V+ CTGY+K+W PA + L + +
Sbjct: 303 FVVVHCTGYIKAWPPAGVSLPDDD 326
>MGI|MGI:88071 [details] [associations]
symbol:Arnt "aryl hydrocarbon receptor nuclear translocator"
species:10090 "Mus musculus" [GO:0000989 "transcription factor
binding transcription factor activity" evidence=IPI] [GO:0001666
"response to hypoxia" evidence=ISO;IDA] [GO:0001892 "embryonic
placenta development" evidence=IMP] [GO:0003677 "DNA binding"
evidence=IGI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=TAS] [GO:0003713
"transcription coactivator activity" evidence=IDA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0004874 "aryl
hydrocarbon receptor activity" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005667 "transcription factor complex" evidence=IDA;TAS]
[GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0009636 "response
to toxic substance" evidence=TAS] [GO:0010575 "positive regulation
vascular endothelial growth factor production" evidence=ISO]
[GO:0017162 "aryl hydrocarbon receptor binding" evidence=ISO]
[GO:0030154 "cell differentiation" evidence=IMP] [GO:0030522
"intracellular receptor mediated signaling pathway" evidence=IMP]
[GO:0033235 "positive regulation of protein sumoylation"
evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO] [GO:0043619 "regulation of transcription from RNA
polymerase II promoter in response to oxidative stress"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO;IDA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0046886 "positive regulation of hormone biosynthetic process"
evidence=ISO] [GO:0046982 "protein heterodimerization activity"
evidence=ISO;IPI] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:2001141 "regulation of RNA biosynthetic process"
evidence=IPI] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 MGI:MGI:88071 GO:GO:0005737
GO:GO:0030154 EMBL:CH466620 GO:GO:0003677 GO:GO:0009636
GO:GO:0043565 GO:GO:0001666 GO:GO:0045944 GO:GO:0010575
GO:GO:0003700 GO:GO:0005667 GO:GO:0003705 GO:GO:0003713
SMART:SM00086 TIGRFAMs:TIGR00229 eggNOG:NOG293303
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0033235 GO:GO:0004874 HOGENOM:HOG000234380 HOVERGEN:HBG000164
CTD:405 KO:K09097 OrthoDB:EOG4R7V9H OMA:AGQGSKF ChiTaRS:ARNT
GO:GO:0001892 GO:GO:0046886 GO:GO:0043619 EMBL:U10325 EMBL:U14333
EMBL:AK153355 EMBL:BC012870 IPI:IPI00627004 IPI:IPI00875488
PIR:A55448 PIR:A56241 RefSeq:NP_001032826.1 UniGene:Mm.250265
ProteinModelPortal:P53762 SMR:P53762 DIP:DIP-280N IntAct:P53762
STRING:P53762 PhosphoSite:P53762 PRIDE:P53762
Ensembl:ENSMUST00000102749 GeneID:11863 KEGG:mmu:11863
InParanoid:Q921F3 NextBio:279865 Bgee:P53762 CleanEx:MM_ARNT
Genevestigator:P53762 GermOnline:ENSMUSG00000015522 Uniprot:P53762
Length = 791
Score = 324 (119.1 bits), Expect = 1.8e-43, Sum P(4) = 1.8e-43
Identities = 60/88 (68%), Positives = 77/88 (87%)
Query: 217 VSRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHS 276
++R+NHSEIE+RRR+KM YITELS MVP C A++RK DKLT+LRMAV H+K++RG ++
Sbjct: 89 LARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVSHMKSLRGTGNT 148
Query: 277 YTEGHYKPAFLTDQELKHLILQAAEGFL 304
T+G YKP+FLTDQELKHLIL+AA+GFL
Sbjct: 149 STDGSYKPSFLTDQELKHLILEAADGFL 176
Score = 110 (43.8 bits), Expect = 4.8e-12, Sum P(3) = 4.8e-12
Identities = 21/27 (77%), Positives = 24/27 (88%)
Query: 305 QNHSEIEKRRRDKMNTYITELSAMVPT 331
+NHSEIE+RRR+KM YITELS MVPT
Sbjct: 92 ENHSEIERRRRNKMTAYITELSDMVPT 118
Score = 106 (42.4 bits), Expect = 1.8e-43, Sum P(4) = 1.8e-43
Identities = 26/96 (27%), Positives = 46/96 (47%)
Query: 430 YLKSWAPAKMGLEESEDRKYSVIQCTGYLKSWAPAKMXXXXXXXXXXXXXXXXXXXLVAV 489
+L++ +G + + + V+ CTGY+K+W PA + LVA+
Sbjct: 284 FLRNRCRNGLGSVKEGEPHFVVVHCTGYIKAWPPAGVSLPDDDPEAGQGSKFC---LVAI 340
Query: 490 GRVLADKTRILNKQVNL-RPIQFLSRHALDGKFLFV 524
GR+ + N+ +P +F+SRH ++G F FV
Sbjct: 341 GRLQVTSSPNCTDMSNICQPTEFISRHNIEGIFTFV 376
Score = 84 (34.6 bits), Expect = 1.8e-43, Sum P(4) = 1.8e-43
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 305 QNHSEIEKRRRDKMNTYITELSAMVPTLLPVKTADIPAEVS----RLCPGARRSFFCRMK 360
Q H + + R++++T +E +A+ +L +KT + E R+C G+RRSF CRM+
Sbjct: 212 QVHPDDVDKLREQLST--SE-NALTGRVLDLKTGTVKKEGQQSSMRMCMGSRRSFICRMR 268
Query: 361 C 361
C
Sbjct: 269 C 269
Score = 83 (34.3 bits), Expect = 2.8e-09, Sum P(3) = 2.8e-09
Identities = 17/44 (38%), Positives = 29/44 (65%)
Query: 168 QGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQV 211
Q E G + +D +HP DV K++EQL +S+ + R++D+K+ V
Sbjct: 201 QSEWFGSTLYDQVHPDDVDKLREQLSTSENALTGRVLDLKTGTV 244
Score = 73 (30.8 bits), Expect = 1.8e-43, Sum P(4) = 1.8e-43
Identities = 15/45 (33%), Positives = 30/45 (66%)
Query: 517 LDGKFLFV-YQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNT 560
L G+ L V ++F++K ++ +++ F+NP++ +IEY+I NT
Sbjct: 418 LKGQVLSVMFRFRSKTREWLWMRTSSFTFQNPYSDEIEYIICTNT 462
Score = 72 (30.4 bits), Expect = 5.7e-40, Sum P(4) = 5.7e-40
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 416 QQSDRKYSVIQCTGYLKSWAPAKMGLEESE 445
++ + + V+ CTGY+K+W PA + L + +
Sbjct: 297 KEGEPHFVVVHCTGYIKAWPPAGVSLPDDD 326
>UNIPROTKB|Q9BE97 [details] [associations]
symbol:ARNT "Aryl hydrocarbon receptor nuclear
translocator" species:9913 "Bos taurus" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005737 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0005667 GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229
eggNOG:NOG293303 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000234380 HOVERGEN:HBG000164 HSSP:P27540 EMBL:AB053954
IPI:IPI00701584 RefSeq:NP_776418.1 UniGene:Bt.87256
ProteinModelPortal:Q9BE97 SMR:Q9BE97 STRING:Q9BE97 PRIDE:Q9BE97
GeneID:281010 KEGG:bta:281010 CTD:405 InParanoid:Q9BE97 KO:K09097
OrthoDB:EOG4R7V9H NextBio:20805105 Uniprot:Q9BE97
Length = 790
Score = 323 (118.8 bits), Expect = 1.8e-43, Sum P(4) = 1.8e-43
Identities = 60/88 (68%), Positives = 77/88 (87%)
Query: 217 VSRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHS 276
++R+NHSEIE+RRR+KM YITELS MVP C A++RK DKLT+LRMAV H+K++RG ++
Sbjct: 89 LARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVSHMKSLRGTGNT 148
Query: 277 YTEGHYKPAFLTDQELKHLILQAAEGFL 304
T+G YKP+FLTDQELKHLIL+AA+GFL
Sbjct: 149 STDGTYKPSFLTDQELKHLILEAADGFL 176
Score = 110 (43.8 bits), Expect = 3.8e-12, Sum P(3) = 3.8e-12
Identities = 21/27 (77%), Positives = 24/27 (88%)
Query: 305 QNHSEIEKRRRDKMNTYITELSAMVPT 331
+NHSEIE+RRR+KM YITELS MVPT
Sbjct: 92 ENHSEIERRRRNKMTAYITELSDMVPT 118
Score = 106 (42.4 bits), Expect = 1.8e-43, Sum P(4) = 1.8e-43
Identities = 27/88 (30%), Positives = 44/88 (50%)
Query: 440 GLEESEDRK--YSVIQCTGYLKSWAPAKMXXXXXXXXXXXXXXXXXXXLVAVGRVLADKT 497
GL ++D + + V+ CTGY+K+W PA + LVA+GR+ +
Sbjct: 292 GLGSAKDGEPHFVVVHCTGYIKAWPPAGVSLPDDDPEAGQGSKFC---LVAIGRLQVTSS 348
Query: 498 RILNKQVNL-RPIQFLSRHALDGKFLFV 524
N+ +P +F+SRH ++G F FV
Sbjct: 349 PNCTDMSNVCQPTEFISRHNIEGIFTFV 376
Score = 85 (35.0 bits), Expect = 1.8e-43, Sum P(4) = 1.8e-43
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 305 QNHSEIEKRRRDKMNTYITELSAMVPTLLPVKTADIPAEVS----RLCPGARRSFFCRMK 360
Q H + + R++++T +E +A+ +L +KT + E R+C G+RRSF CRM+
Sbjct: 212 QVHPDDVDKLREQLST--SE-NALTGRILDLKTGTVKKEGQQSSMRMCMGSRRSFICRMR 268
Query: 361 C 361
C
Sbjct: 269 C 269
Score = 84 (34.6 bits), Expect = 1.7e-09, Sum P(3) = 1.7e-09
Identities = 17/44 (38%), Positives = 29/44 (65%)
Query: 168 QGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQV 211
Q E G + +D +HP DV K++EQL +S+ + R++D+K+ V
Sbjct: 201 QSEWFGSTLYDQVHPDDVDKLREQLSTSENALTGRILDLKTGTV 244
Score = 74 (31.1 bits), Expect = 1.8e-43, Sum P(4) = 1.8e-43
Identities = 15/45 (33%), Positives = 30/45 (66%)
Query: 517 LDGKFLFV-YQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNT 560
L G+ L V ++F++K ++ +++ F+NP++ +IEY+I NT
Sbjct: 418 LKGQVLSVMFRFRSKNREWLWVRTSSFTFQNPYSDEIEYIICTNT 462
Score = 70 (29.7 bits), Expect = 9.5e-40, Sum P(4) = 9.5e-40
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 422 YSVIQCTGYLKSWAPAKMGLEESE 445
+ V+ CTGY+K+W PA + L + +
Sbjct: 303 FVVVHCTGYIKAWPPAGVSLPDDD 326
>UNIPROTKB|F1LMF9 [details] [associations]
symbol:Arnt "Aryl hydrocarbon receptor nuclear
translocator" species:10116 "Rattus norvegicus" [GO:0001666
"response to hypoxia" evidence=IEA] [GO:0001892 "embryonic placenta
development" evidence=IEA] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=IEA] [GO:0004874 "aryl hydrocarbon receptor
activity" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0010575
"positive regulation vascular endothelial growth factor production"
evidence=IEA] [GO:0017162 "aryl hydrocarbon receptor binding"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0033235 "positive regulation of protein sumoylation"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043619 "regulation of transcription from RNA
polymerase II promoter in response to oxidative stress"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0046886
"positive regulation of hormone biosynthetic process" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 RGD:2153
GO:GO:0005737 GO:GO:0030154 GO:GO:0043565 GO:GO:0001666
GO:GO:0045944 GO:GO:0010575 GO:GO:0005667 GO:GO:0003705
GO:GO:0003713 SMART:SM00086 TIGRFAMs:TIGR00229
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0033235 GO:GO:0004874 GO:GO:0001892 GO:GO:0046886
GO:GO:0043619 IPI:IPI00947650 Ensembl:ENSRNOT00000064442
ArrayExpress:F1LMF9 Uniprot:F1LMF9
Length = 801
Score = 324 (119.1 bits), Expect = 2.0e-43, Sum P(4) = 2.0e-43
Identities = 60/88 (68%), Positives = 77/88 (87%)
Query: 217 VSRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHS 276
++R+NHSEIE+RRR+KM YITELS MVP C A++RK DKLT+LRMAV H+K++RG ++
Sbjct: 89 LARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVSHMKSLRGTGNT 148
Query: 277 YTEGHYKPAFLTDQELKHLILQAAEGFL 304
T+G YKP+FLTDQELKHLIL+AA+GFL
Sbjct: 149 STDGSYKPSFLTDQELKHLILEAADGFL 176
Score = 110 (43.8 bits), Expect = 6.3e-12, Sum P(3) = 6.3e-12
Identities = 21/27 (77%), Positives = 24/27 (88%)
Query: 305 QNHSEIEKRRRDKMNTYITELSAMVPT 331
+NHSEIE+RRR+KM YITELS MVPT
Sbjct: 92 ENHSEIERRRRNKMTAYITELSDMVPT 118
Score = 106 (42.4 bits), Expect = 2.0e-43, Sum P(4) = 2.0e-43
Identities = 26/96 (27%), Positives = 46/96 (47%)
Query: 430 YLKSWAPAKMGLEESEDRKYSVIQCTGYLKSWAPAKMXXXXXXXXXXXXXXXXXXXLVAV 489
+L++ +G + + + V+ CTGY+K+W PA + LVA+
Sbjct: 284 FLRNRCRNGLGSVKEGEPHFVVVHCTGYIKAWPPAGVSLPDDDPEAGQGSKFC---LVAI 340
Query: 490 GRVLADKTRILNKQVNL-RPIQFLSRHALDGKFLFV 524
GR+ + N+ +P +F+SRH ++G F FV
Sbjct: 341 GRLQVTSSPNCTDMSNICQPTEFISRHNIEGIFTFV 376
Score = 85 (35.0 bits), Expect = 2.0e-43, Sum P(4) = 2.0e-43
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 305 QNHSEIEKRRRDKMNTYITELSAMVPTLLPVKTADIPAEVS----RLCPGARRSFFCRMK 360
Q H + + R++++T +E +A+ +L +KT + E R+C G+RRSF CRM+
Sbjct: 212 QVHPDDVDKLREQLST--SE-NALTGRILDLKTGTVKKEGQQSSMRMCMGSRRSFICRMR 268
Query: 361 C 361
C
Sbjct: 269 C 269
Score = 84 (34.6 bits), Expect = 2.9e-09, Sum P(3) = 2.9e-09
Identities = 17/44 (38%), Positives = 29/44 (65%)
Query: 168 QGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQV 211
Q E G + +D +HP DV K++EQL +S+ + R++D+K+ V
Sbjct: 201 QSEWFGSTLYDQVHPDDVDKLREQLSTSENALTGRILDLKTGTV 244
Score = 72 (30.4 bits), Expect = 2.0e-43, Sum P(4) = 2.0e-43
Identities = 15/45 (33%), Positives = 29/45 (64%)
Query: 517 LDGKFLFV-YQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNT 560
L G+ L V ++F+ K ++ +++ F+NP++ +IEY+I NT
Sbjct: 418 LKGQVLSVMFRFRAKNREWLWMRTSSFTFQNPYSDEIEYIICTNT 462
Score = 72 (30.4 bits), Expect = 6.4e-40, Sum P(4) = 6.4e-40
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 416 QQSDRKYSVIQCTGYLKSWAPAKMGLEESE 445
++ + + V+ CTGY+K+W PA + L + +
Sbjct: 297 KEGEPHFVVVHCTGYIKAWPPAGVSLPDDD 326
>UNIPROTKB|F6V057 [details] [associations]
symbol:ARNT "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 Ensembl:ENSCAFT00000019492
EMBL:AAEX03011051 Uniprot:F6V057
Length = 781
Score = 323 (118.8 bits), Expect = 2.1e-43, Sum P(4) = 2.1e-43
Identities = 60/88 (68%), Positives = 77/88 (87%)
Query: 217 VSRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHS 276
++R+NHSEIE+RRR+KM YITELS MVP C A++RK DKLT+LRMAV H+K++RG ++
Sbjct: 80 LARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVSHMKSLRGTGNT 139
Query: 277 YTEGHYKPAFLTDQELKHLILQAAEGFL 304
T+G YKP+FLTDQELKHLIL+AA+GFL
Sbjct: 140 STDGTYKPSFLTDQELKHLILEAADGFL 167
Score = 110 (43.8 bits), Expect = 4.6e-12, Sum P(3) = 4.6e-12
Identities = 21/27 (77%), Positives = 24/27 (88%)
Query: 305 QNHSEIEKRRRDKMNTYITELSAMVPT 331
+NHSEIE+RRR+KM YITELS MVPT
Sbjct: 83 ENHSEIERRRRNKMTAYITELSDMVPT 109
Score = 104 (41.7 bits), Expect = 2.1e-43, Sum P(4) = 2.1e-43
Identities = 25/87 (28%), Positives = 42/87 (48%)
Query: 439 MGLEESEDRKYSVIQCTGYLKSWAPAKMXXXXXXXXXXXXXXXXXXXLVAVGRVLADKTR 498
+G + + + V+ CTGY+K+W PA + LVA+GR+ +
Sbjct: 284 LGSVKDGEPHFVVVHCTGYIKAWPPAGVSLPDDDPEAGQGSKFC---LVAIGRLQVTSSP 340
Query: 499 ILNKQVNL-RPIQFLSRHALDGKFLFV 524
N+ +P +F+SRH ++G F FV
Sbjct: 341 NCTDMSNVCQPTEFISRHNIEGIFTFV 367
Score = 85 (35.0 bits), Expect = 2.1e-43, Sum P(4) = 2.1e-43
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 305 QNHSEIEKRRRDKMNTYITELSAMVPTLLPVKTADIPAEVS----RLCPGARRSFFCRMK 360
Q H + + R++++T +E +A+ +L +KT + E R+C G+RRSF CRM+
Sbjct: 203 QVHPDDVDKLREQLST--SE-NALTGRILDLKTGTVKKEGQQSSMRMCMGSRRSFICRMR 259
Query: 361 C 361
C
Sbjct: 260 C 260
Score = 84 (34.6 bits), Expect = 2.2e-09, Sum P(3) = 2.2e-09
Identities = 17/44 (38%), Positives = 29/44 (65%)
Query: 168 QGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQV 211
Q E G + +D +HP DV K++EQL +S+ + R++D+K+ V
Sbjct: 192 QSEWFGSTLYDQVHPDDVDKLREQLSTSENALTGRILDLKTGTV 235
Score = 75 (31.5 bits), Expect = 2.1e-43, Sum P(4) = 2.1e-43
Identities = 15/45 (33%), Positives = 30/45 (66%)
Query: 517 LDGKFLFV-YQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNT 560
L G+ L V ++F++K ++ +++ F+NP++ +IEY+I NT
Sbjct: 409 LKGQVLSVMFRFRSKNREWLWMRTSSFTFQNPYSDEIEYIICTNT 453
Score = 70 (29.7 bits), Expect = 6.8e-40, Sum P(4) = 6.8e-40
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 422 YSVIQCTGYLKSWAPAKMGLEESE 445
+ V+ CTGY+K+W PA + L + +
Sbjct: 294 FVVVHCTGYIKAWPPAGVSLPDDD 317
>UNIPROTKB|F1SS94 [details] [associations]
symbol:ARNT "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 OMA:AGQGSKF EMBL:CU463875
Ensembl:ENSSSCT00000007282 Uniprot:F1SS94
Length = 781
Score = 323 (118.8 bits), Expect = 2.1e-43, Sum P(4) = 2.1e-43
Identities = 60/88 (68%), Positives = 77/88 (87%)
Query: 217 VSRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHS 276
++R+NHSEIE+RRR+KM YITELS MVP C A++RK DKLT+LRMAV H+K++RG ++
Sbjct: 80 LARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVSHMKSLRGTGNT 139
Query: 277 YTEGHYKPAFLTDQELKHLILQAAEGFL 304
T+G YKP+FLTDQELKHLIL+AA+GFL
Sbjct: 140 STDGTYKPSFLTDQELKHLILEAADGFL 167
Score = 110 (43.8 bits), Expect = 4.6e-12, Sum P(3) = 4.6e-12
Identities = 21/27 (77%), Positives = 24/27 (88%)
Query: 305 QNHSEIEKRRRDKMNTYITELSAMVPT 331
+NHSEIE+RRR+KM YITELS MVPT
Sbjct: 83 ENHSEIERRRRNKMTAYITELSDMVPT 109
Score = 104 (41.7 bits), Expect = 2.1e-43, Sum P(4) = 2.1e-43
Identities = 25/87 (28%), Positives = 42/87 (48%)
Query: 439 MGLEESEDRKYSVIQCTGYLKSWAPAKMXXXXXXXXXXXXXXXXXXXLVAVGRVLADKTR 498
+G + + + V+ CTGY+K+W PA + LVA+GR+ +
Sbjct: 284 LGSVKDGEPHFVVVHCTGYIKAWPPAGVSLPDDDPEAGQGSKFC---LVAIGRLQVTSSP 340
Query: 499 ILNKQVNL-RPIQFLSRHALDGKFLFV 524
N+ +P +F+SRH ++G F FV
Sbjct: 341 NCTDMSNVCQPTEFISRHNIEGIFTFV 367
Score = 85 (35.0 bits), Expect = 2.1e-43, Sum P(4) = 2.1e-43
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 305 QNHSEIEKRRRDKMNTYITELSAMVPTLLPVKTADIPAEVS----RLCPGARRSFFCRMK 360
Q H + + R++++T +E +A+ +L +KT + E R+C G+RRSF CRM+
Sbjct: 203 QVHPDDVDKLREQLST--SE-NALTGRILDLKTGTVKKEGQQSSMRMCMGSRRSFICRMR 259
Query: 361 C 361
C
Sbjct: 260 C 260
Score = 84 (34.6 bits), Expect = 2.2e-09, Sum P(3) = 2.2e-09
Identities = 17/44 (38%), Positives = 29/44 (65%)
Query: 168 QGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQV 211
Q E G + +D +HP DV K++EQL +S+ + R++D+K+ V
Sbjct: 192 QSEWFGSTLYDQVHPDDVDKLREQLSTSENALTGRILDLKTGTV 235
Score = 75 (31.5 bits), Expect = 2.1e-43, Sum P(4) = 2.1e-43
Identities = 15/45 (33%), Positives = 30/45 (66%)
Query: 517 LDGKFLFV-YQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNT 560
L G+ L V ++F++K ++ +++ F+NP++ +IEY+I NT
Sbjct: 409 LKGQVLSVMFRFRSKNREWLWMRTSSFTFQNPYSDEIEYIICTNT 453
Score = 70 (29.7 bits), Expect = 6.8e-40, Sum P(4) = 6.8e-40
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 422 YSVIQCTGYLKSWAPAKMGLEESE 445
+ V+ CTGY+K+W PA + L + +
Sbjct: 294 FVVVHCTGYIKAWPPAGVSLPDDD 317
>UNIPROTKB|E2QT96 [details] [associations]
symbol:ARNT "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 Gene3D:4.10.280.10 SUPFAM:SSF47459
Ensembl:ENSCAFT00000019492 Uniprot:E2QT96
Length = 791
Score = 323 (118.8 bits), Expect = 2.3e-43, Sum P(4) = 2.3e-43
Identities = 60/88 (68%), Positives = 77/88 (87%)
Query: 217 VSRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHS 276
++R+NHSEIE+RRR+KM YITELS MVP C A++RK DKLT+LRMAV H+K++RG ++
Sbjct: 89 LARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVSHMKSLRGTGNT 148
Query: 277 YTEGHYKPAFLTDQELKHLILQAAEGFL 304
T+G YKP+FLTDQELKHLIL+AA+GFL
Sbjct: 149 STDGTYKPSFLTDQELKHLILEAADGFL 176
Score = 110 (43.8 bits), Expect = 4.8e-12, Sum P(3) = 4.8e-12
Identities = 21/27 (77%), Positives = 24/27 (88%)
Query: 305 QNHSEIEKRRRDKMNTYITELSAMVPT 331
+NHSEIE+RRR+KM YITELS MVPT
Sbjct: 92 ENHSEIERRRRNKMTAYITELSDMVPT 118
Score = 104 (41.7 bits), Expect = 2.3e-43, Sum P(4) = 2.3e-43
Identities = 25/87 (28%), Positives = 42/87 (48%)
Query: 439 MGLEESEDRKYSVIQCTGYLKSWAPAKMXXXXXXXXXXXXXXXXXXXLVAVGRVLADKTR 498
+G + + + V+ CTGY+K+W PA + LVA+GR+ +
Sbjct: 293 LGSVKDGEPHFVVVHCTGYIKAWPPAGVSLPDDDPEAGQGSKFC---LVAIGRLQVTSSP 349
Query: 499 ILNKQVNL-RPIQFLSRHALDGKFLFV 524
N+ +P +F+SRH ++G F FV
Sbjct: 350 NCTDMSNVCQPTEFISRHNIEGIFTFV 376
Score = 85 (35.0 bits), Expect = 2.3e-43, Sum P(4) = 2.3e-43
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 305 QNHSEIEKRRRDKMNTYITELSAMVPTLLPVKTADIPAEVS----RLCPGARRSFFCRMK 360
Q H + + R++++T +E +A+ +L +KT + E R+C G+RRSF CRM+
Sbjct: 212 QVHPDDVDKLREQLST--SE-NALTGRILDLKTGTVKKEGQQSSMRMCMGSRRSFICRMR 268
Query: 361 C 361
C
Sbjct: 269 C 269
Score = 84 (34.6 bits), Expect = 2.3e-09, Sum P(3) = 2.3e-09
Identities = 17/44 (38%), Positives = 29/44 (65%)
Query: 168 QGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQV 211
Q E G + +D +HP DV K++EQL +S+ + R++D+K+ V
Sbjct: 201 QSEWFGSTLYDQVHPDDVDKLREQLSTSENALTGRILDLKTGTV 244
Score = 75 (31.5 bits), Expect = 2.3e-43, Sum P(4) = 2.3e-43
Identities = 15/45 (33%), Positives = 30/45 (66%)
Query: 517 LDGKFLFV-YQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNT 560
L G+ L V ++F++K ++ +++ F+NP++ +IEY+I NT
Sbjct: 418 LKGQVLSVMFRFRSKNREWLWMRTSSFTFQNPYSDEIEYIICTNT 462
Score = 70 (29.7 bits), Expect = 7.6e-40, Sum P(4) = 7.6e-40
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 422 YSVIQCTGYLKSWAPAKMGLEESE 445
+ V+ CTGY+K+W PA + L + +
Sbjct: 303 FVVVHCTGYIKAWPPAGVSLPDDD 326
Score = 38 (18.4 bits), Expect = 8.8e-05, Sum P(3) = 8.8e-05
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 323 TELSAMVPTLLPVKTADIPA 342
TE+++ VP+L P A PA
Sbjct: 8 TEMTSDVPSLGPAIAAGNPA 27
>UNIPROTKB|E9PTS2 [details] [associations]
symbol:Arnt "Aryl hydrocarbon receptor nuclear
translocator" species:10116 "Rattus norvegicus" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 RGD:2153
GO:GO:0005737 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0005667 GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
IPI:IPI00476252 Ensembl:ENSRNOT00000044738 ArrayExpress:E9PTS2
Uniprot:E9PTS2
Length = 785
Score = 323 (118.8 bits), Expect = 2.8e-43, Sum P(4) = 2.8e-43
Identities = 60/87 (68%), Positives = 76/87 (87%)
Query: 218 SRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSY 277
+R+NHSEIE+RRR+KM YITELS MVP C A++RK DKLT+LRMAV H+K++RG ++
Sbjct: 75 ARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVSHMKSLRGTGNTS 134
Query: 278 TEGHYKPAFLTDQELKHLILQAAEGFL 304
T+G YKP+FLTDQELKHLIL+AA+GFL
Sbjct: 135 TDGSYKPSFLTDQELKHLILEAADGFL 161
Score = 110 (43.8 bits), Expect = 5.9e-12, Sum P(3) = 5.9e-12
Identities = 21/27 (77%), Positives = 24/27 (88%)
Query: 305 QNHSEIEKRRRDKMNTYITELSAMVPT 331
+NHSEIE+RRR+KM YITELS MVPT
Sbjct: 77 ENHSEIERRRRNKMTAYITELSDMVPT 103
Score = 106 (42.4 bits), Expect = 2.8e-43, Sum P(4) = 2.8e-43
Identities = 26/96 (27%), Positives = 46/96 (47%)
Query: 430 YLKSWAPAKMGLEESEDRKYSVIQCTGYLKSWAPAKMXXXXXXXXXXXXXXXXXXXLVAV 489
+L++ +G + + + V+ CTGY+K+W PA + LVA+
Sbjct: 269 FLRNRCRNGLGSVKEGEPHFVVVHCTGYIKAWPPAGVSLPDDDPEAGQGSKFC---LVAI 325
Query: 490 GRVLADKTRILNKQVNL-RPIQFLSRHALDGKFLFV 524
GR+ + N+ +P +F+SRH ++G F FV
Sbjct: 326 GRLQVTSSPNCTDMSNICQPTEFISRHNIEGIFTFV 361
Score = 85 (35.0 bits), Expect = 2.8e-43, Sum P(4) = 2.8e-43
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 305 QNHSEIEKRRRDKMNTYITELSAMVPTLLPVKTADIPAEVS----RLCPGARRSFFCRMK 360
Q H + + R++++T +E +A+ +L +KT + E R+C G+RRSF CRM+
Sbjct: 197 QVHPDDVDKLREQLST--SE-NALTGRILDLKTGTVKKEGQQSSMRMCMGSRRSFICRMR 253
Query: 361 C 361
C
Sbjct: 254 C 254
Score = 84 (34.6 bits), Expect = 2.7e-09, Sum P(3) = 2.7e-09
Identities = 17/44 (38%), Positives = 29/44 (65%)
Query: 168 QGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQV 211
Q E G + +D +HP DV K++EQL +S+ + R++D+K+ V
Sbjct: 186 QSEWFGSTLYDQVHPDDVDKLREQLSTSENALTGRILDLKTGTV 229
Score = 72 (30.4 bits), Expect = 2.8e-43, Sum P(4) = 2.8e-43
Identities = 15/45 (33%), Positives = 29/45 (64%)
Query: 517 LDGKFLFV-YQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNT 560
L G+ L V ++F+ K ++ +++ F+NP++ +IEY+I NT
Sbjct: 403 LKGQVLSVMFRFRAKNREWLWMRTSSFTFQNPYSDEIEYIICTNT 447
Score = 72 (30.4 bits), Expect = 9.0e-40, Sum P(4) = 9.0e-40
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 416 QQSDRKYSVIQCTGYLKSWAPAKMGLEESE 445
++ + + V+ CTGY+K+W PA + L + +
Sbjct: 282 KEGEPHFVVVHCTGYIKAWPPAGVSLPDDD 311
>ZFIN|ZDB-GENE-060126-7 [details] [associations]
symbol:arnt "aryl hydrocarbon receptor nuclear
translocator" species:7955 "Danio rerio" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IPI] [GO:0009410 "response to xenobiotic
stimulus" evidence=IPI] [GO:0043565 "sequence-specific DNA binding"
evidence=IPI] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0009636
"response to toxic substance" evidence=IMP] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 ZFIN:ZDB-GENE-060126-7
GO:GO:0005737 GO:GO:0045893 GO:GO:0009636 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935
GO:GO:0009410 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:BX927222
IPI:IPI00997127 Ensembl:ENSDART00000121648 Bgee:E7FDK6
Uniprot:E7FDK6
Length = 746
Score = 322 (118.4 bits), Expect = 3.2e-43, Sum P(4) = 3.2e-43
Identities = 60/87 (68%), Positives = 76/87 (87%)
Query: 218 SRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSY 277
+R+NHSEIE+RRR+KM YITELS MVP C A++RK DKLT+LRMAV H+K++RG ++
Sbjct: 64 ARENHSEIERRRRNKMTAYITELSDMVPACSALARKPDKLTILRMAVSHMKSLRGTGNTS 123
Query: 278 TEGHYKPAFLTDQELKHLILQAAEGFL 304
T+G YKP+FLTDQELKHLIL+AA+GFL
Sbjct: 124 TDGTYKPSFLTDQELKHLILEAADGFL 150
Score = 108 (43.1 bits), Expect = 3.2e-43, Sum P(4) = 3.2e-43
Identities = 29/90 (32%), Positives = 43/90 (47%)
Query: 439 MGLEESEDRKYSVIQCTGYLKSWAPAKMXXXXXXXXXXXXXXXXXXXLVAVGRVLA---- 494
+G + +++Y V+ CTGY++SW PA M LVA+GR+
Sbjct: 268 LGSAKDGEQQYVVVHCTGYIRSWPPAGMNLSEEEADNNQGNRFC---LVAIGRLQVTCCP 324
Query: 495 DKTRILNKQVNLRPIQFLSRHALDGKFLFV 524
T I N V P++F+SRH G + FV
Sbjct: 325 SDTSINNISV---PVEFISRHNSQGVYTFV 351
Score = 105 (42.0 bits), Expect = 5.1e-12, Sum P(3) = 5.1e-12
Identities = 20/26 (76%), Positives = 23/26 (88%)
Query: 305 QNHSEIEKRRRDKMNTYITELSAMVP 330
+NHSEIE+RRR+KM YITELS MVP
Sbjct: 66 ENHSEIERRRRNKMTAYITELSDMVP 91
Score = 90 (36.7 bits), Expect = 2.3e-41, Sum P(4) = 2.3e-41
Identities = 14/30 (46%), Positives = 21/30 (70%)
Query: 416 QQSDRKYSVIQCTGYLKSWAPAKMGLEESE 445
+ +++Y V+ CTGY++SW PA M L E E
Sbjct: 272 KDGEQQYVVVHCTGYIRSWPPAGMNLSEEE 301
Score = 88 (36.0 bits), Expect = 2.7e-10, Sum P(3) = 2.7e-10
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 167 AQGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRE-RLIDVKSKQV 211
AQ + LG S +D LHP DV K++EQL +++ + R++D+K+ V
Sbjct: 174 AQSDWLGSSLYDQLHPDDVEKLREQLSTTENNNNSGRMLDMKTGTV 219
Score = 79 (32.9 bits), Expect = 3.2e-43, Sum P(4) = 3.2e-43
Identities = 21/61 (34%), Positives = 34/61 (55%)
Query: 305 QNHSEIEKRRRDKMNTYITELSAMVPTLLPVKTADIPAE----VSRLCPGARRSFFCRMK 360
Q H + ++ R++++T TE + +L +KT + E R+ GARRSF CRM+
Sbjct: 186 QLHPDDVEKLREQLST--TENNNNSGRMLDMKTGTVKKEGGQATVRMSMGARRSFICRMR 243
Query: 361 C 361
C
Sbjct: 244 C 244
Score = 75 (31.5 bits), Expect = 3.2e-43, Sum P(4) = 3.2e-43
Identities = 15/45 (33%), Positives = 31/45 (68%)
Query: 517 LDGKFLFV-YQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNT 560
L G+ + V ++F++K +V +++ F+NP++++IEY+I NT
Sbjct: 393 LRGQVMSVMFRFQSKSREWVWMRTSSFTFQNPFSEEIEYIICTNT 437
>UNIPROTKB|E1BS64 [details] [associations]
symbol:ARNT2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004871 "signal transducer activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0007417 "central nervous system development"
evidence=IEA] [GO:0017162 "aryl hydrocarbon receptor binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
OMA:VCMDMSG EMBL:AADN02041540 EMBL:AADN02041541 EMBL:AADN02041542
EMBL:AADN02041543 IPI:IPI00587220 Ensembl:ENSGALT00000010400
ArrayExpress:E1BS64 Uniprot:E1BS64
Length = 725
Score = 315 (115.9 bits), Expect = 3.9e-43, Sum P(4) = 3.9e-43
Identities = 59/87 (67%), Positives = 75/87 (86%)
Query: 218 SRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSY 277
+R+NHSEIE+RRR+KM YITELS MVP C A++RK DKLT+LRMAV H+K++RG +
Sbjct: 67 ARENHSEIERRRRNKMTQYITELSDMVPTCSALARKPDKLTILRMAVSHMKSMRGTGNKS 126
Query: 278 TEGHYKPAFLTDQELKHLILQAAEGFL 304
T+G YKP+FLT+QELKHLIL+AA+GFL
Sbjct: 127 TDGAYKPSFLTEQELKHLILEAADGFL 153
Score = 111 (44.1 bits), Expect = 3.9e-43, Sum P(4) = 3.9e-43
Identities = 27/87 (31%), Positives = 41/87 (47%)
Query: 439 MGLEESEDRKYSVIQCTGYLKSWAPAKMXXXXXXXXXXXXXXXXXXXLVAVGRVLADKTR 498
+G + + +Y+V+ CTGY+K+W PA M LVA+GR+ +
Sbjct: 270 LGPVKEGEAQYAVVHCTGYIKAWPPAGMTIPEEDADVGQGSKYC---LVAIGRLQVTSSP 326
Query: 499 ILNKQVNLR-PIQFLSRHALDGKFLFV 524
+ + P +FLSRH DG FV
Sbjct: 327 VCMDMNGMSVPTEFLSRHNSDGVITFV 353
Score = 109 (43.4 bits), Expect = 4.2e-13, Sum P(3) = 4.2e-13
Identities = 21/27 (77%), Positives = 24/27 (88%)
Query: 305 QNHSEIEKRRRDKMNTYITELSAMVPT 331
+NHSEIE+RRR+KM YITELS MVPT
Sbjct: 69 ENHSEIERRRRNKMTQYITELSDMVPT 95
Score = 85 (35.0 bits), Expect = 1.9e-40, Sum P(4) = 1.9e-40
Identities = 12/30 (40%), Positives = 22/30 (73%)
Query: 416 QQSDRKYSVIQCTGYLKSWAPAKMGLEESE 445
++ + +Y+V+ CTGY+K+W PA M + E +
Sbjct: 274 KEGEAQYAVVHCTGYIKAWPPAGMTIPEED 303
Score = 85 (35.0 bits), Expect = 1.1e-10, Sum P(3) = 1.1e-10
Identities = 17/44 (38%), Positives = 29/44 (65%)
Query: 168 QGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQV 211
Q E G + ++ +HP DV K++EQL +S+ S R++D+K+ V
Sbjct: 178 QSEWFGSTLYEQVHPDDVEKLREQLCTSENSMTGRILDLKTGTV 221
Score = 83 (34.3 bits), Expect = 3.9e-43, Sum P(4) = 3.9e-43
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 305 QNHSEIEKRRRDKMNTYITELSAMVPTLLPVKTADIPAEVS----RLCPGARRSFFCRMK 360
Q H + ++ R+++ T +E ++M +L +KT + E R+C G+RRSF CRM+
Sbjct: 189 QVHPDDVEKLREQLCT--SE-NSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRSFICRMR 245
Query: 361 C 361
C
Sbjct: 246 C 246
Score = 78 (32.5 bits), Expect = 3.9e-43, Sum P(4) = 3.9e-43
Identities = 16/45 (35%), Positives = 29/45 (64%)
Query: 517 LDGKFLFV-YQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNT 560
L G+ L V Y+F+ K ++ +++ F+NP++ +IEY+I NT
Sbjct: 395 LKGQVLSVMYRFRTKNREWMLIRTSSFTFQNPYSDEIEYIICTNT 439
Score = 41 (19.5 bits), Expect = 7.4e-26, Sum P(2) = 7.4e-26
Identities = 10/29 (34%), Positives = 20/29 (68%)
Query: 305 QNHSEIEKRRRDKMNTYITELSAM-VPTL 332
Q +E+E +RD +++Y +LS + VP++
Sbjct: 446 QQQAELEVHQRDGLSSY--DLSQVPVPSI 472
>UNIPROTKB|F1PPH3 [details] [associations]
symbol:ARNT2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0017162 "aryl
hydrocarbon receptor binding" evidence=IEA] [GO:0007417 "central
nervous system development" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0001701
"in utero embryonic development" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0007417 GO:GO:0003700 GO:GO:0006351
GO:GO:0005667 GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
OMA:VCMDMSG EMBL:AAEX03002373 EMBL:AAEX03002374 EMBL:AAEX03002375
Ensembl:ENSCAFT00000022111 Uniprot:F1PPH3
Length = 717
Score = 318 (117.0 bits), Expect = 5.2e-43, Sum P(4) = 5.2e-43
Identities = 60/87 (68%), Positives = 75/87 (86%)
Query: 218 SRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSY 277
SR+NHSEIE+RRR+KM YITELS MVP C A++RK DKLT+LRMAV H+K++RG +
Sbjct: 64 SRENHSEIERRRRNKMTQYITELSDMVPTCSALARKPDKLTILRMAVSHMKSMRGTGNKS 123
Query: 278 TEGHYKPAFLTDQELKHLILQAAEGFL 304
T+G YKP+FLT+QELKHLIL+AA+GFL
Sbjct: 124 TDGAYKPSFLTEQELKHLILEAADGFL 150
Score = 111 (44.1 bits), Expect = 5.2e-43, Sum P(4) = 5.2e-43
Identities = 27/87 (31%), Positives = 41/87 (47%)
Query: 439 MGLEESEDRKYSVIQCTGYLKSWAPAKMXXXXXXXXXXXXXXXXXXXLVAVGRVLADKTR 498
+G + + +Y+V+ CTGY+K+W PA M LVA+GR+ +
Sbjct: 267 LGPVKEGEAQYAVVHCTGYIKAWPPAGMTIPEEDADVGQGSKYC---LVAIGRLQVTSSP 323
Query: 499 ILNKQVNLR-PIQFLSRHALDGKFLFV 524
+ + P +FLSRH DG FV
Sbjct: 324 VCMDMSGMSVPTEFLSRHNSDGIITFV 350
Score = 109 (43.4 bits), Expect = 2.1e-12, Sum P(3) = 2.1e-12
Identities = 21/27 (77%), Positives = 24/27 (88%)
Query: 305 QNHSEIEKRRRDKMNTYITELSAMVPT 331
+NHSEIE+RRR+KM YITELS MVPT
Sbjct: 66 ENHSEIERRRRNKMTQYITELSDMVPT 92
Score = 85 (35.0 bits), Expect = 2.5e-40, Sum P(4) = 2.5e-40
Identities = 12/30 (40%), Positives = 22/30 (73%)
Query: 416 QQSDRKYSVIQCTGYLKSWAPAKMGLEESE 445
++ + +Y+V+ CTGY+K+W PA M + E +
Sbjct: 271 KEGEAQYAVVHCTGYIKAWPPAGMTIPEED 300
Score = 85 (35.0 bits), Expect = 5.6e-10, Sum P(3) = 5.6e-10
Identities = 17/44 (38%), Positives = 29/44 (65%)
Query: 168 QGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQV 211
Q E G + ++ +HP DV K++EQL +S+ S R++D+K+ V
Sbjct: 175 QSEWFGSTLYEQVHPDDVEKLREQLCTSENSMTGRILDLKTGTV 218
Score = 83 (34.3 bits), Expect = 5.2e-43, Sum P(4) = 5.2e-43
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 305 QNHSEIEKRRRDKMNTYITELSAMVPTLLPVKTADIPAEVS----RLCPGARRSFFCRMK 360
Q H + ++ R+++ T +E ++M +L +KT + E R+C G+RRSF CRM+
Sbjct: 186 QVHPDDVEKLREQLCT--SE-NSMTGRILDLKTGTVKKEGQQSSMRMCMGSRRSFICRMR 242
Query: 361 C 361
C
Sbjct: 243 C 243
Score = 71 (30.1 bits), Expect = 5.2e-43, Sum P(4) = 5.2e-43
Identities = 15/45 (33%), Positives = 28/45 (62%)
Query: 517 LDGKFLFV-YQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNT 560
L G+ L V Y+ + K ++ +++ F+NP++ +IEY+I NT
Sbjct: 392 LKGQVLSVMYRLRTKSREWMLIRTSSFTFQNPYSDEIEYVICTNT 436
Score = 42 (19.8 bits), Expect = 2.0e-26, Sum P(2) = 2.0e-26
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 305 QNHSEIEKRRRDKMNTYITELSAM-VPTL 332
Q +E+E +RD +++Y +LS + VP L
Sbjct: 443 QQQAELEVHQRDGLSSY--DLSQVPVPNL 469
>UNIPROTKB|Q98SN3 [details] [associations]
symbol:ARNT "Aryl hydrocarbon receptor nuclear
translocator" species:9031 "Gallus gallus" [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0001666 "response
to hypoxia" evidence=IEA] [GO:0001892 "embryonic placenta
development" evidence=IEA] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=IEA] [GO:0004874 "aryl hydrocarbon receptor
activity" evidence=IEA] [GO:0010575 "positive regulation vascular
endothelial growth factor production" evidence=IEA] [GO:0017162
"aryl hydrocarbon receptor binding" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0033235 "positive regulation of
protein sumoylation" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0043619 "regulation of transcription
from RNA polymerase II promoter in response to oxidative stress"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0046886
"positive regulation of hormone biosynthetic process" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005634 GO:GO:0005737 GO:GO:0030154
GO:GO:0043565 GO:GO:0001666 GO:GO:0045944 GO:GO:0010575
GO:GO:0005667 GO:GO:0003705 GO:GO:0003713 SMART:SM00086
TIGRFAMs:TIGR00229 eggNOG:NOG293303 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0033235 GO:GO:0004874
HOGENOM:HOG000234380 HOVERGEN:HBG000164 CTD:405 KO:K09097
OMA:AGQGSKF GO:GO:0046886 GO:GO:0043619 HSSP:P22415
EMBL:AADN02010491 EMBL:AADN02010492 EMBL:AADN02010493 EMBL:AF348088
IPI:IPI00581095 PIR:JC7635 RefSeq:NP_989531.1 UniGene:Gga.8458
ProteinModelPortal:Q98SN3 SMR:Q98SN3 STRING:Q98SN3
Ensembl:ENSGALT00000001095 GeneID:374026 KEGG:gga:374026
InParanoid:Q98SN3 NextBio:20813553 Uniprot:Q98SN3
Length = 805
Score = 323 (118.8 bits), Expect = 8.9e-43, Sum P(4) = 8.9e-43
Identities = 60/88 (68%), Positives = 77/88 (87%)
Query: 217 VSRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHS 276
++R+NHSEIE+RRR+KM YITELS MVP C A++RK DKLT+LRMAV H+K++RG ++
Sbjct: 89 LARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVSHMKSLRGTGNT 148
Query: 277 YTEGHYKPAFLTDQELKHLILQAAEGFL 304
T+G YKP+FLTDQELKHLIL+AA+GFL
Sbjct: 149 STDGTYKPSFLTDQELKHLILEAADGFL 176
Score = 110 (43.8 bits), Expect = 3.2e-12, Sum P(3) = 3.2e-12
Identities = 21/27 (77%), Positives = 24/27 (88%)
Query: 305 QNHSEIEKRRRDKMNTYITELSAMVPT 331
+NHSEIE+RRR+KM YITELS MVPT
Sbjct: 92 ENHSEIERRRRNKMTAYITELSDMVPT 118
Score = 106 (42.4 bits), Expect = 8.9e-43, Sum P(4) = 8.9e-43
Identities = 25/87 (28%), Positives = 41/87 (47%)
Query: 439 MGLEESEDRKYSVIQCTGYLKSWAPAKMXXXXXXXXXXXXXXXXXXXLVAVGRVLADKTR 498
+G + + Y V+ CTGY+K+W PA + LVA+GR+ +
Sbjct: 314 LGATKDGEPHYVVVHCTGYIKAWPPAGVSLPDDDPDAGQGSKFC---LVAIGRLQVTSSP 370
Query: 499 ILNKQVNL-RPIQFLSRHALDGKFLFV 524
N+ +P +F+SRH +G F F+
Sbjct: 371 NCTDMSNVCQPTEFISRHNTEGIFTFI 397
Score = 78 (32.5 bits), Expect = 8.9e-43, Sum P(4) = 8.9e-43
Identities = 17/39 (43%), Positives = 23/39 (58%)
Query: 326 SAMVPTLLPVKTADIPAEVS---RLCPGARRSFFCRMKC 361
SA +L +KT + E R+C G+RRSF CRM+C
Sbjct: 252 SASKGRILDLKTGTVKKEGQQSMRMCMGSRRSFICRMRC 290
Score = 75 (31.5 bits), Expect = 8.9e-43, Sum P(4) = 8.9e-43
Identities = 15/45 (33%), Positives = 30/45 (66%)
Query: 517 LDGKFLFV-YQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNT 560
L G+ L V ++F++K ++ +++ F+NP++ +IEY+I NT
Sbjct: 439 LKGQVLSVMFRFRSKNREWLWMRTSSFTFQNPYSDEIEYIICTNT 483
Score = 74 (31.1 bits), Expect = 1.8e-39, Sum P(4) = 1.8e-39
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 422 YSVIQCTGYLKSWAPAKMGLEESE 445
Y V+ CTGY+K+W PA + L + +
Sbjct: 324 YVVVHCTGYIKAWPPAGVSLPDDD 347
Score = 71 (30.1 bits), Expect = 3.6e-12, Sum P(4) = 3.6e-12
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 168 QGELLGQSWFDILHPKDVAKVKEQLFSSD 196
Q E G + +D +HP DV K++EQL +S+
Sbjct: 201 QSEWFGSTLYDQVHPDDVGKLREQLSTSE 229
>UNIPROTKB|F1N4Q7 [details] [associations]
symbol:ARNTL2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0007623 "circadian
rhythm" evidence=IEA] [GO:0000982 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677 GO:GO:0007623
GO:GO:0045944 GO:GO:0005667 GO:GO:0004871 GO:GO:0000982
SMART:SM00086 TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 OMA:IPQCNPM EMBL:DAAA02014003
IPI:IPI00837789 Ensembl:ENSBTAT00000043261 Uniprot:F1N4Q7
Length = 629
Score = 279 (103.3 bits), Expect = 9.3e-43, Sum P(4) = 9.3e-43
Identities = 59/131 (45%), Positives = 84/131 (64%)
Query: 179 ILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQVIVG-----LPVSRQNHSEIEKRRRDKM 233
I+ K + K+ + F+ LS R + ++ G + R+ HS+ EKRRRDKM
Sbjct: 54 IMKEKVMEKLSQNPFTCLLSTRVEMSAFSCSRMEDGEQQVKIKSFREAHSQTEKRRRDKM 113
Query: 234 NTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSYTEGHYKPAFLTDQELK 293
N I +LS M+P C M+RKLDKLTVLR+AVQHL++++G Y +Y+P+F+ D EL+
Sbjct: 114 NNLIGKLSTMIPQCSPMARKLDKLTVLRLAVQHLRSLKGMTSCYPGNNYRPSFIHDNELR 173
Query: 294 HLILQAAEGFL 304
HLIL+ AEGFL
Sbjct: 174 HLILKTAEGFL 184
Score = 156 (60.0 bits), Expect = 4.7e-25, Sum P(3) = 4.7e-25
Identities = 30/41 (73%), Positives = 35/41 (85%)
Query: 168 QGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKS 208
Q L+GQS FD LHPKDV+KVKEQL SSD+SPRE+LID K+
Sbjct: 209 QASLIGQSLFDFLHPKDVSKVKEQLSSSDISPREKLIDAKA 249
Score = 132 (51.5 bits), Expect = 9.3e-43, Sum P(4) = 9.3e-43
Identities = 20/39 (51%), Positives = 33/39 (84%)
Query: 525 YQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNTLIL 563
Y+F+ K G++V L+S+W +F NPWTK++EY++S NT++L
Sbjct: 429 YKFRAKDGSFVTLKSQWFSFTNPWTKELEYIVSVNTVVL 467
Score = 120 (47.3 bits), Expect = 9.3e-43, Sum P(4) = 9.3e-43
Identities = 27/90 (30%), Positives = 47/90 (52%)
Query: 442 EESEDRKYSVIQCTGYLKSWAPAKMXXXXXXXXXXXXXXXXXXXLVAVGRVLADKTRILN 501
++ + RK+ + CTGYL+SW P LVAVGR+ +
Sbjct: 294 KKKDHRKFCTVHCTGYLRSWPPN--IAGMEEERDNKKDRSNFTCLVAVGRLQPHIVPQNS 351
Query: 502 KQVNLRPIQFLSRHALDGKFLFVYQ-FKNK 530
++ ++P +F++R A++GKF++V Q FK +
Sbjct: 352 GEIKVKPTEFITRFAVNGKFVYVDQSFKTR 381
Score = 94 (38.1 bits), Expect = 4.5e-40, Sum P(4) = 4.5e-40
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 415 QQQSDRKYSVIQCTGYLKSWAPAKMGLEESEDRK 448
+++ RK+ + CTGYL+SW P G+EE D K
Sbjct: 294 KKKDHRKFCTVHCTGYLRSWPPNIAGMEEERDNK 327
Score = 94 (38.1 bits), Expect = 2.0e-18, Sum P(3) = 2.0e-18
Identities = 18/35 (51%), Positives = 24/35 (68%)
Query: 301 EGFLQNHSEIEKRRRDKMNTYITELSAMVPTLLPV 335
+ F + HS+ EKRRRDKMN I +LS M+P P+
Sbjct: 96 KSFREAHSQTEKRRRDKMNNLIGKLSTMIPQCSPM 130
Score = 62 (26.9 bits), Expect = 9.3e-43, Sum P(4) = 9.3e-43
Identities = 19/70 (27%), Positives = 36/70 (51%)
Query: 295 LILQAAEGFLQNHSEIEKRRRDKMNTYITELSAMVPTLLPVKT-ADIPAEVSRLCPGARR 353
LI Q+ FL + ++ K + ++ I+ ++ ++ ++ S + G+RR
Sbjct: 212 LIGQSLFDFL-HPKDVSKVKEQLSSSDISPREKLIDAKAALQVHSNFHTSKSHVYSGSRR 270
Query: 354 SFFCRMK-CK 362
SFFCR+K CK
Sbjct: 271 SFFCRIKSCK 280
Score = 39 (18.8 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 9/34 (26%), Positives = 19/34 (55%)
Query: 170 ELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERL 203
ELLG S ++ H D + + ++ + L +E++
Sbjct: 392 ELLGTSCYEYFHQDDHSNLTDK-HKAVLQSKEKI 424
>UNIPROTKB|K7GQY6 [details] [associations]
symbol:ARNT "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 PRINTS:PR00785 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CU463875 Ensembl:ENSSSCT00000032666 Ensembl:ENSSSCT00000033780
Uniprot:K7GQY6
Length = 347
Score = 323 (118.8 bits), Expect = 1.3e-42, Sum P(3) = 1.3e-42
Identities = 60/88 (68%), Positives = 77/88 (87%)
Query: 217 VSRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHS 276
++R+NHSEIE+RRR+KM YITELS MVP C A++RK DKLT+LRMAV H+K++RG ++
Sbjct: 89 LARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVSHMKSLRGTGNT 148
Query: 277 YTEGHYKPAFLTDQELKHLILQAAEGFL 304
T+G YKP+FLTDQELKHLIL+AA+GFL
Sbjct: 149 STDGTYKPSFLTDQELKHLILEAADGFL 176
Score = 110 (43.8 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 21/27 (77%), Positives = 24/27 (88%)
Query: 305 QNHSEIEKRRRDKMNTYITELSAMVPT 331
+NHSEIE+RRR+KM YITELS MVPT
Sbjct: 92 ENHSEIERRRRNKMTAYITELSDMVPT 118
Score = 85 (35.0 bits), Expect = 1.3e-42, Sum P(3) = 1.3e-42
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 305 QNHSEIEKRRRDKMNTYITELSAMVPTLLPVKTADIPAEVS----RLCPGARRSFFCRMK 360
Q H + + R++++T +E +A+ +L +KT + E R+C G+RRSF CRM+
Sbjct: 212 QVHPDDVDKLREQLST--SE-NALTGRILDLKTGTVKKEGQQSSMRMCMGSRRSFICRMR 268
Query: 361 C 361
C
Sbjct: 269 C 269
Score = 70 (29.7 bits), Expect = 1.3e-42, Sum P(3) = 1.3e-42
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 422 YSVIQCTGYLKSWAPAKMGLEESE 445
+ V+ CTGY+K+W PA + L + +
Sbjct: 303 FVVVHCTGYIKAWPPAGVSLPDDD 326
Score = 66 (28.3 bits), Expect = 3.3e-42, Sum P(3) = 3.3e-42
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 439 MGLEESEDRKYSVIQCTGYLKSWAPA 464
+G + + + V+ CTGY+K+W PA
Sbjct: 293 LGSVKDGEPHFVVVHCTGYIKAWPPA 318
>FB|FBgn0264075 [details] [associations]
symbol:tgo "tango" species:7227 "Drosophila melanogaster"
[GO:0007422 "peripheral nervous system development" evidence=TAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IPI]
[GO:0046982 "protein heterodimerization activity" evidence=TAS;IPI]
[GO:0005634 "nucleus" evidence=IC;ISS;IDA] [GO:0000981
"sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=ISS] [GO:0007417 "central nervous system
development" evidence=IMP] [GO:0007424 "open tracheal system
development" evidence=TAS] [GO:0007425 "epithelial cell fate
determination, open tracheal system" evidence=NAS;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA;TAS;IPI] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0007165 "signal transduction" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0007420 "brain development"
evidence=IMP] [GO:0048666 "neuron development" evidence=IMP]
[GO:0007517 "muscle organ development" evidence=IMP] [GO:0048813
"dendrite morphogenesis" evidence=IMP] [GO:0071456 "cellular
response to hypoxia" evidence=IDA] [GO:0032869 "cellular response
to insulin stimulus" evidence=IDA] [GO:0043565 "sequence-specific
DNA binding" evidence=IDA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0003705 "RNA polymerase II distal enhancer sequence-specific
DNA binding transcription factor activity" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0043234 "protein
complex" evidence=IPI] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0008347 "glial cell migration"
evidence=IMP] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 EMBL:AE014297 GO:GO:0005634
GO:GO:0005737 GO:GO:0043234 GO:GO:0007420 GO:GO:0032869
GO:GO:0043565 GO:GO:0045944 GO:GO:0007422 GO:GO:0071456
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0000122
GO:GO:0048813 GO:GO:0004871 GO:GO:0007517 GO:GO:0046982
SMART:SM00086 TIGRFAMs:TIGR00229 eggNOG:NOG293303
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
KO:K09097 EMBL:AB002556 EMBL:AF016053 EMBL:AF020426 EMBL:AF154417
EMBL:AY069581 EMBL:M14550 RefSeq:NP_731308.1 UniGene:Dm.3376
ProteinModelPortal:O15945 SMR:O15945 IntAct:O15945 MINT:MINT-875932
STRING:O15945 PaxDb:O15945 EnsemblMetazoa:FBtr0082005 GeneID:41084
KEGG:dme:Dmel_CG11987 CTD:41084 FlyBase:FBgn0015014
InParanoid:O15945 OMA:QPVTEGY OrthoDB:EOG4GTHV2 PhylomeDB:O15945
GenomeRNAi:41084 NextBio:822075 Bgee:O15945 GermOnline:CG11987
GO:GO:0007425 GO:GO:0008347 Uniprot:O15945
Length = 642
Score = 314 (115.6 bits), Expect = 4.4e-42, Sum P(4) = 4.4e-42
Identities = 59/87 (67%), Positives = 74/87 (85%)
Query: 218 SRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSY 277
SR+NH EIE+RRR+KM YITELS MVP C A++RK DKLT+LRMAV H+K +RG ++
Sbjct: 14 SRENHCEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVAHMKALRGTGNTS 73
Query: 278 TEGHYKPAFLTDQELKHLILQAAEGFL 304
++G YKP+FLTDQELKHLIL+AA+GFL
Sbjct: 74 SDGTYKPSFLTDQELKHLILEAADGFL 100
Score = 124 (48.7 bits), Expect = 4.4e-42, Sum P(4) = 4.4e-42
Identities = 30/87 (34%), Positives = 42/87 (48%)
Query: 441 LEESED-RKYSVIQCTGYLKSWAPAKMXXXXXXXXXXXXXXXXXXXLVAVGRVLADKTRI 499
L S D Y+V+ CTGY+K+W P M LVA+GR+ T
Sbjct: 215 LGPSRDGTNYAVVHCTGYIKNWPPTDMFPNMHMERDVDDMSSHCC-LVAIGRLQVTSTAA 273
Query: 500 LNKQVNLRPIQFLSRHALDGKFLFVYQ 526
+ + +F++RHA+DGKF FV Q
Sbjct: 274 NDMSGSNNQSEFITRHAMDGKFTFVDQ 300
Score = 106 (42.4 bits), Expect = 4.0e-14, Sum P(3) = 4.0e-14
Identities = 23/37 (62%), Positives = 27/37 (72%)
Query: 297 LQAAEGFL--QNHSEIEKRRRDKMNTYITELSAMVPT 331
+Q E F +NH EIE+RRR+KM YITELS MVPT
Sbjct: 6 IQDKERFASRENHCEIERRRRNKMTAYITELSDMVPT 42
Score = 75 (31.5 bits), Expect = 4.4e-42, Sum P(4) = 4.4e-42
Identities = 13/40 (32%), Positives = 25/40 (62%)
Query: 521 FLFVYQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNT 560
F +Y+ + K YV L+++ F NP+T ++EY++ N+
Sbjct: 345 FSLLYRARAKNSEYVWLRTQAYAFLNPYTDEVEYIVCTNS 384
Score = 75 (31.5 bits), Expect = 5.5e-11, Sum P(3) = 5.5e-11
Identities = 15/44 (34%), Positives = 26/44 (59%)
Query: 168 QGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQV 211
Q + G S ++ +HP D K++EQL + + R++D+KS V
Sbjct: 125 QSDWYGTSLYEHIHPDDREKIREQLSTQESQNAGRILDLKSGTV 168
Score = 71 (30.1 bits), Expect = 1.3e-36, Sum P(4) = 1.3e-36
Identities = 10/18 (55%), Positives = 14/18 (77%)
Query: 422 YSVIQCTGYLKSWAPAKM 439
Y+V+ CTGY+K+W P M
Sbjct: 224 YAVVHCTGYIKNWPPTDM 241
Score = 59 (25.8 bits), Expect = 4.4e-42, Sum P(4) = 4.4e-42
Identities = 18/59 (30%), Positives = 28/59 (47%)
Query: 307 HSEIEKRRRDKMNTYI-TELSAMVPTLLPVKTADIPAE----VSRLCPGARRSFFCRMK 360
+ I R+K+ + T+ S +L +K+ + E RL GARR F CRM+
Sbjct: 134 YEHIHPDDREKIREQLSTQESQNAGRILDLKSGTVKKEGHQSSMRLSMGARRGFICRMR 192
>RGD|2153 [details] [associations]
symbol:Arnt "aryl hydrocarbon receptor nuclear translocator"
species:10116 "Rattus norvegicus" [GO:0000989 "transcription factor
binding transcription factor activity" evidence=ISO] [GO:0001666
"response to hypoxia" evidence=IEP;ISO] [GO:0001892 "embryonic
placenta development" evidence=ISO] [GO:0003677 "DNA binding"
evidence=IEA;ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=ISO] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0004874 "aryl
hydrocarbon receptor activity" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005667 "transcription factor complex" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=ISO] [GO:0009636 "response to toxic substance"
evidence=NAS] [GO:0010575 "positive regulation vascular endothelial
growth factor production" evidence=ISO] [GO:0017162 "aryl hydrocarbon
receptor binding" evidence=ISO] [GO:0030154 "cell differentiation"
evidence=ISO] [GO:0030522 "intracellular receptor mediated signaling
pathway" evidence=ISO] [GO:0033235 "positive regulation of protein
sumoylation" evidence=ISO] [GO:0043619 "regulation of transcription
from RNA polymerase II promoter in response to oxidative stress"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0046886 "positive regulation of hormone biosynthetic process"
evidence=ISO] [GO:0046982 "protein heterodimerization activity"
evidence=ISO;IDA] [GO:2001141 "regulation of RNA biosynthetic
process" evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO;IDA] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=ISO] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010
Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112
PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 RGD:2153 GO:GO:0005634 GO:GO:0005737 GO:GO:0030154
GO:GO:0009636 GO:GO:0043565 GO:GO:0001666 GO:GO:0045944 GO:GO:0010575
GO:GO:0005667 GO:GO:0003705 GO:GO:0003713 GO:GO:0046982 SMART:SM00086
TIGRFAMs:TIGR00229 eggNOG:NOG293303 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0033235 GO:GO:0004874 HOVERGEN:HBG000164
CTD:405 KO:K09097 GO:GO:0001892 GO:GO:0046886 GO:GO:0043619
EMBL:U61184 EMBL:U08986 IPI:IPI00195864 PIR:S58376 RefSeq:NP_036912.1
UniGene:Rn.10520 ProteinModelPortal:P41739 SMR:P41739 IntAct:P41739
STRING:P41739 PhosphoSite:P41739 PRIDE:P41739 GeneID:25242
KEGG:rno:25242 UCSC:RGD:2153 InParanoid:P41739 NextBio:605831
ArrayExpress:P41739 Genevestigator:P41739
GermOnline:ENSRNOG00000031174 Uniprot:P41739
Length = 800
Score = 324 (119.1 bits), Expect = 1.4e-41, Sum P(4) = 1.4e-41
Identities = 60/88 (68%), Positives = 77/88 (87%)
Query: 217 VSRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHS 276
++R+NHSEIE+RRR+KM YITELS MVP C A++RK DKLT+LRMAV H+K++RG ++
Sbjct: 89 LARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVSHMKSLRGTGNT 148
Query: 277 YTEGHYKPAFLTDQELKHLILQAAEGFL 304
T+G YKP+FLTDQELKHLIL+AA+GFL
Sbjct: 149 STDGSYKPSFLTDQELKHLILEAADGFL 176
Score = 110 (43.8 bits), Expect = 4.1e-10, Sum P(3) = 4.1e-10
Identities = 21/27 (77%), Positives = 24/27 (88%)
Query: 305 QNHSEIEKRRRDKMNTYITELSAMVPT 331
+NHSEIE+RRR+KM YITELS MVPT
Sbjct: 92 ENHSEIERRRRNKMTAYITELSDMVPT 118
Score = 106 (42.4 bits), Expect = 1.4e-41, Sum P(4) = 1.4e-41
Identities = 26/96 (27%), Positives = 46/96 (47%)
Query: 430 YLKSWAPAKMGLEESEDRKYSVIQCTGYLKSWAPAKMXXXXXXXXXXXXXXXXXXXLVAV 489
+L++ +G + + + V+ CTGY+K+W PA + LVA+
Sbjct: 284 FLRNRCRNGLGSVKEGEPHFVVVHCTGYIKAWPPAGVSLPDDDPEAGQGSKFC---LVAI 340
Query: 490 GRVLADKTRILNKQVNL-RPIQFLSRHALDGKFLFV 524
GR+ + N+ +P +F+SRH ++G F FV
Sbjct: 341 GRLQVTSSPNCTDMSNICQPTEFISRHNIEGIFTFV 376
Score = 85 (35.0 bits), Expect = 1.4e-41, Sum P(4) = 1.4e-41
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 305 QNHSEIEKRRRDKMNTYITELSAMVPTLLPVKTADIPAEVS----RLCPGARRSFFCRMK 360
Q H + + R++++T +E +A+ +L +KT + E R+C G+RRSF CRM+
Sbjct: 212 QVHPDDVDKLREQLST--SE-NALTGRILDLKTGTVKKEGQQSSMRMCMGSRRSFICRMR 268
Query: 361 C 361
C
Sbjct: 269 C 269
Score = 84 (34.6 bits), Expect = 1.8e-07, Sum P(3) = 1.8e-07
Identities = 17/44 (38%), Positives = 29/44 (65%)
Query: 168 QGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQV 211
Q E G + +D +HP DV K++EQL +S+ + R++D+K+ V
Sbjct: 201 QSEWFGSTLYDQVHPDDVDKLREQLSTSENALTGRILDLKTGTV 244
Score = 72 (30.4 bits), Expect = 4.5e-38, Sum P(4) = 4.5e-38
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 416 QQSDRKYSVIQCTGYLKSWAPAKMGLEESE 445
++ + + V+ CTGY+K+W PA + L + +
Sbjct: 297 KEGEPHFVVVHCTGYIKAWPPAGVSLPDDD 326
Score = 54 (24.1 bits), Expect = 1.4e-41, Sum P(4) = 1.4e-41
Identities = 12/45 (26%), Positives = 26/45 (57%)
Query: 517 LDGKFLFV-YQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNT 560
L G+ L V ++F+ K ++ +++ F+NP++ ++ I NT
Sbjct: 418 LKGQVLSVMFRFRAKNREWLWMRTSSFTFQNPYSDEMSIFICTNT 462
Score = 37 (18.1 bits), Expect = 6.0e-32, Sum P(3) = 6.0e-32
Identities = 15/49 (30%), Positives = 22/49 (44%)
Query: 403 TGAAASCHRKKKQQQSDRKYSVIQCTGYLKSWAPAKMGLEESEDRKYSV 451
TG AS R+++QQQ ++ Q T P + GL + SV
Sbjct: 496 TGVLAS--RQQQQQQQQQQQQQQQQTEL--DMVPGRDGLASYSHSQVSV 540
>UNIPROTKB|P79832 [details] [associations]
symbol:arnt "Aryl hydrocarbon receptor nuclear
translocator" species:8022 "Oncorhynchus mykiss" [GO:0003714
"transcription corepressor activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0009967 "positive regulation of signal
transduction" evidence=IDA] [GO:0009968 "negative regulation of
signal transduction" evidence=IDA] [GO:0017162 "aryl hydrocarbon
receptor binding" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0046982 "protein heterodimerization activity" evidence=IPI]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005634 GO:GO:0005737 GO:GO:0003714 GO:GO:0045892
GO:GO:0045893 GO:GO:0006355 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0005667 GO:GO:0004871 GO:GO:0009967
SMART:SM00086 TIGRFAMs:TIGR00229 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOVERGEN:HBG000164 GO:GO:0017162 CTD:405 EMBL:U73840 EMBL:U73841
RefSeq:NP_001118182.1 UniGene:Omy.14654 ProteinModelPortal:P79832
SMR:P79832 IntAct:P79832 GeneID:100136759 GO:GO:0009968
Uniprot:P79832
Length = 723
Score = 318 (117.0 bits), Expect = 4.1e-41, Sum P(4) = 4.1e-41
Identities = 59/87 (67%), Positives = 76/87 (87%)
Query: 218 SRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSY 277
+R+NHSEIE+RRR+KM YITELS MVP C A++RK DKLT+LRMAV H+K++RG+ ++
Sbjct: 66 ARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVSHMKSLRGSGNTA 125
Query: 278 TEGHYKPAFLTDQELKHLILQAAEGFL 304
+G YKP+FLTDQELKHLIL+AA+GFL
Sbjct: 126 ADGTYKPSFLTDQELKHLILEAADGFL 152
Score = 110 (43.8 bits), Expect = 5.7e-11, Sum P(3) = 5.7e-11
Identities = 21/27 (77%), Positives = 24/27 (88%)
Query: 305 QNHSEIEKRRRDKMNTYITELSAMVPT 331
+NHSEIE+RRR+KM YITELS MVPT
Sbjct: 68 ENHSEIERRRRNKMTAYITELSDMVPT 94
Score = 102 (41.0 bits), Expect = 4.1e-41, Sum P(4) = 4.1e-41
Identities = 27/96 (28%), Positives = 43/96 (44%)
Query: 430 YLKSWAPAKMGLEESEDRKYSVIQCTGYLKSWAPAKMXXXXXXXXXXXXXXXXXXXLVAV 489
+L+S +G + + +Y V+ CTGY+KSW P + LVA+
Sbjct: 260 FLRSRNRNGLGPPKDGEPQYVVVHCTGYIKSWPPTGVNLTDEEADNILGSRYC---LVAI 316
Query: 490 GRVLADKTRILNKQVNLR-PIQFLSRHALDGKFLFV 524
GR+ ++ P++F+SRH G F FV
Sbjct: 317 GRLQVTSCPSDTDMNSISVPVEFISRHNCQGLFTFV 352
Score = 84 (34.6 bits), Expect = 2.7e-08, Sum P(3) = 2.7e-08
Identities = 17/45 (37%), Positives = 30/45 (66%)
Query: 167 AQGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQV 211
+Q + LG S +D LHP D K++EQL +++ + R++D+K+ V
Sbjct: 176 SQSDWLGSSLYDQLHPDDGDKLREQLSTAESNNTGRMLDLKTGTV 220
Score = 80 (33.2 bits), Expect = 4.1e-41, Sum P(4) = 4.1e-41
Identities = 22/61 (36%), Positives = 33/61 (54%)
Query: 305 QNHSEIEKRRRDKMNTYITELSAMVPTLLPVKTADIPAEVS----RLCPGARRSFFCRMK 360
Q H + + R++++T E S +L +KT + E R+C GARRSF CRM+
Sbjct: 188 QLHPDDGDKLREQLST--AE-SNNTGRMLDLKTGTVKKEGQQSSVRMCMGARRSFICRMR 244
Query: 361 C 361
C
Sbjct: 245 C 245
Score = 78 (32.5 bits), Expect = 1.2e-38, Sum P(4) = 1.2e-38
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 416 QQSDRKYSVIQCTGYLKSWAPAKMGLEESE 445
+ + +Y V+ CTGY+KSW P + L + E
Sbjct: 273 KDGEPQYVVVHCTGYIKSWPPTGVNLTDEE 302
Score = 65 (27.9 bits), Expect = 4.1e-41, Sum P(4) = 4.1e-41
Identities = 14/44 (31%), Positives = 29/44 (65%)
Query: 517 LDGKFLFV-YQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKN 559
L G+ L V ++F +K ++ +++ F+NP++++IEY+I N
Sbjct: 394 LKGQVLSVMFRFLSKTRDWLWIRTSSFTFQNPFSEEIEYIICTN 437
>UNIPROTKB|F1S6X1 [details] [associations]
symbol:LOC100738978 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 PRINTS:PR00785 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 GO:GO:0005737
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CU914667
Ensembl:ENSSSCT00000014635 OMA:KKXILNG Uniprot:F1S6X1
Length = 273
Score = 341 (125.1 bits), Expect = 5.2e-41, Sum P(2) = 5.2e-41
Identities = 63/87 (72%), Positives = 79/87 (90%)
Query: 218 SRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSY 277
+R+ HS+IEKRRRDKMN++I EL+++VP C+AMSRKLDKLTVLRMAVQH+KT+RGA + Y
Sbjct: 73 AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY 132
Query: 278 TEGHYKPAFLTDQELKHLILQAAEGFL 304
TE +YKP FL+D ELKHLIL+AA+GFL
Sbjct: 133 TEANYKPTFLSDDELKHLILRAADGFL 159
Score = 161 (61.7 bits), Expect = 5.0e-17, Sum P(2) = 5.0e-17
Identities = 34/51 (66%), Positives = 40/51 (78%)
Query: 167 AQGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQVIVGLPV 217
+Q +L+GQS FD LHPKD+AKVKEQL SSD +PRERLID K+ GLPV
Sbjct: 183 SQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKT-----GLPV 228
Score = 111 (44.1 bits), Expect = 5.2e-41, Sum P(2) = 5.2e-41
Identities = 24/31 (77%), Positives = 24/31 (77%)
Query: 331 TLLPVKTADIPAEVSRLCPGARRSFFCRMKC 361
T LPVKT DI SRLC GARRSFFCRMKC
Sbjct: 224 TGLPVKT-DITPGPSRLCSGARRSFFCRMKC 253
Score = 110 (43.8 bits), Expect = 7.7e-11, Sum P(2) = 7.7e-11
Identities = 26/56 (46%), Positives = 39/56 (69%)
Query: 282 YKPAFLTDQELKHLILQAAE--GFLQN----HSEIEKRRRDKMNTYITELSAMVPT 331
Y+ + TD++ H L+ E G ++N HS+IEKRRRDKMN++I EL+++VPT
Sbjct: 46 YQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPT 101
>UNIPROTKB|J9P204 [details] [associations]
symbol:ARNT "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 OMA:AGQGSKF EMBL:AAEX03011051
Ensembl:ENSCAFT00000047223 Uniprot:J9P204
Length = 791
Score = 323 (118.8 bits), Expect = 5.5e-41, Sum P(4) = 5.5e-41
Identities = 60/88 (68%), Positives = 77/88 (87%)
Query: 217 VSRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHS 276
++R+NHSEIE+RRR+KM YITELS MVP C A++RK DKLT+LRMAV H+K++RG ++
Sbjct: 89 LARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVSHMKSLRGTGNT 148
Query: 277 YTEGHYKPAFLTDQELKHLILQAAEGFL 304
T+G YKP+FLTDQELKHLIL+AA+GFL
Sbjct: 149 STDGTYKPSFLTDQELKHLILEAADGFL 176
Score = 110 (43.8 bits), Expect = 1.0e-09, Sum P(3) = 1.0e-09
Identities = 21/27 (77%), Positives = 24/27 (88%)
Query: 305 QNHSEIEKRRRDKMNTYITELSAMVPT 331
+NHSEIE+RRR+KM YITELS MVPT
Sbjct: 92 ENHSEIERRRRNKMTAYITELSDMVPT 118
Score = 85 (35.0 bits), Expect = 5.5e-41, Sum P(4) = 5.5e-41
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 305 QNHSEIEKRRRDKMNTYITELSAMVPTLLPVKTADIPAEVS----RLCPGARRSFFCRMK 360
Q H + + R++++T +E +A+ +L +KT + E R+C G+RRSF CRM+
Sbjct: 212 QVHPDDVDKLREQLST--SE-NALTGRILDLKTGTVKKEGQQSSMRMCMGSRRSFICRMR 268
Query: 361 C 361
C
Sbjct: 269 C 269
Score = 84 (34.6 bits), Expect = 6.4e-07, Sum P(3) = 6.4e-07
Identities = 17/44 (38%), Positives = 29/44 (65%)
Query: 168 QGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQV 211
Q E G + +D +HP DV K++EQL +S+ + R++D+K+ V
Sbjct: 201 QSEWFGSTLYDQVHPDDVDKLREQLSTSENALTGRILDLKTGTV 244
Score = 81 (33.6 bits), Expect = 5.5e-41, Sum P(4) = 5.5e-41
Identities = 21/86 (24%), Positives = 36/86 (41%)
Query: 439 MGLEESEDRKYSVIQCTGYLKSWAPAKMXXXXXXXXXXXXXXXXXXXLVAVGRVLADKTR 498
+G + + + V+ CTGY+K+W PA + +V +
Sbjct: 293 LGSVKDGEPHFVVVHCTGYIKAWPPAGRQLQEQDFEGEEGNDLIVVTYKKLFQVTSSPNC 352
Query: 499 ILNKQVNLRPIQFLSRHALDGKFLFV 524
V +P +F+SRH ++G F FV
Sbjct: 353 TDMSNV-CQPTEFISRHNIEGIFTFV 377
Score = 75 (31.5 bits), Expect = 5.5e-41, Sum P(4) = 5.5e-41
Identities = 15/45 (33%), Positives = 30/45 (66%)
Query: 517 LDGKFLFV-YQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNT 560
L G+ L V ++F++K ++ +++ F+NP++ +IEY+I NT
Sbjct: 419 LKGQVLSVMFRFRSKNREWLWMRTSSFTFQNPYSDEIEYIICTNT 463
Score = 72 (30.4 bits), Expect = 4.7e-40, Sum P(4) = 4.7e-40
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 422 YSVIQCTGYLKSWAPAKMGLEESE 445
+ V+ CTGY+K+W PA L+E +
Sbjct: 303 FVVVHCTGYIKAWPPAGRQLQEQD 326
>RGD|620230 [details] [associations]
symbol:Arntl2 "aryl hydrocarbon receptor nuclear
translocator-like 2" species:10116 "Rattus norvegicus" [GO:0000982
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding transcription factor activity" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0007623 "circadian rhythm" evidence=IEP;ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 RGD:620230 GO:GO:0005737 GO:GO:0003677
GO:GO:0007623 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P22415 HOVERGEN:HBG107503 IPI:IPI00781061
EMBL:AF327071 UniGene:Rn.41612 ProteinModelPortal:Q924H3
Genevestigator:Q924H3 Uniprot:Q924H3
Length = 565
Score = 242 (90.2 bits), Expect = 1.7e-38, Sum P(4) = 1.7e-38
Identities = 54/107 (50%), Positives = 71/107 (66%)
Query: 199 PRERLIDVKSKQVIVGLPVS-RQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKL 257
PR V S + V +P R+ HS+ EKRRRDKMN I +LS+M+P + KLDKL
Sbjct: 22 PRSPFTSVLSTRTGVAVPNGIREAHSQTEKRRRDKMNHLIWKLSSMIPPHIPTAHKLDKL 81
Query: 258 TVLRMAVQHLKTIRGAVHSYTEGHYKPAFLTDQELKHLILQAAEGFL 304
+VLR AVQ+L++ RG Y + KP+F+ D+EL HLIL+AAEGFL
Sbjct: 82 SVLRRAVQYLRSQRGMTEFYLGENAKPSFIQDKELSHLILKAAEGFL 128
Score = 133 (51.9 bits), Expect = 1.7e-38, Sum P(4) = 1.7e-38
Identities = 31/100 (31%), Positives = 50/100 (50%)
Query: 427 CTGYLKSWAPAKMGLEESEDRKYSVIQCTGYLKSWAPAKMXXXXXXXXXXXXXXXXXXXL 486
CT +K ++ + RK+ I CTGYL+SW P + L
Sbjct: 223 CTVPVKEEQRCSSCSKKKDQRKFHTIHCTGYLRSWPPNVVGTEKEMGSGKDSGPLTC--L 280
Query: 487 VAVGRVLADKTRILNKQVNLRPIQFLSRHALDGKFLFVYQ 526
VA+GR+ N ++N+RP +F++R A++GKF++V Q
Sbjct: 281 VAMGRLQPYTVPPKNGKINVRPAEFITRFAMNGKFVYVDQ 320
Score = 130 (50.8 bits), Expect = 1.7e-38, Sum P(4) = 1.7e-38
Identities = 21/39 (53%), Positives = 32/39 (82%)
Query: 525 YQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNTLIL 563
Y+F+ K G++V L+S+W +F NPWTK +EY++S NTL+L
Sbjct: 369 YKFRVKDGSFVTLKSKWFSFTNPWTKKLEYIVSVNTLVL 407
Score = 129 (50.5 bits), Expect = 4.1e-19, Sum P(3) = 4.1e-19
Identities = 38/91 (41%), Positives = 49/91 (53%)
Query: 168 QGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVK-SKQVIVGLPVSRQN-HSEI 225
Q L+GQ+ FD LHPKDVAKVKEQL S D+S RE+ I K S QV + R HS
Sbjct: 153 QASLMGQNLFDFLHPKDVAKVKEQL-SCDVSLREKPIGTKTSPQVHSHSHIGRSRVHSGS 211
Query: 226 EKRRRDKMNTYITELSAMVPMCHAMSRKLDK 256
+ +M + T C + S+K D+
Sbjct: 212 RRSFFFRMKSSCTVPVKEEQRCSSCSKKKDQ 242
Score = 93 (37.8 bits), Expect = 3.3e-21, Sum P(4) = 3.3e-21
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 302 GFLQNHSEIEKRRRDKMNTYITELSAMVPTLLP 334
G + HS+ EKRRRDKMN I +LS+M+P +P
Sbjct: 41 GIREAHSQTEKRRRDKMNHLIWKLSSMIPPHIP 73
Score = 92 (37.4 bits), Expect = 2.8e-34, Sum P(4) = 2.8e-34
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 407 ASCHRKKKQQQSDRKYSVIQCTGYLKSWAPAKMGLEE 443
+SC +KK Q RK+ I CTGYL+SW P +G E+
Sbjct: 234 SSCSKKKDQ----RKFHTIHCTGYLRSWPPNVVGTEK 266
Score = 53 (23.7 bits), Expect = 1.7e-38, Sum P(4) = 1.7e-38
Identities = 12/20 (60%), Positives = 14/20 (70%)
Query: 345 SRLCPGARRSFFCRMKCKHT 364
SR+ G+RRSFF RMK T
Sbjct: 205 SRVHSGSRRSFFFRMKSSCT 224
Score = 43 (20.2 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 13/48 (27%), Positives = 24/48 (50%)
Query: 157 QHGCAISDLSAQGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLI 204
Q AI Q ELLG S ++ H D + + ++ + L +E+++
Sbjct: 320 QRATAILGYLPQ-ELLGTSCYEYFHQDDHSNLSDK-HKAVLQSKEKIL 365
>MGI|MGI:2684845 [details] [associations]
symbol:Arntl2 "aryl hydrocarbon receptor nuclear
translocator-like 2" species:10090 "Mus musculus" [GO:0000982 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity" evidence=ISO] [GO:0003677
"DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISO] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048511 "rhythmic process"
evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 MGI:MGI:2684845 GO:GO:0005737
GO:GO:0003677 GO:GO:0007623 GO:GO:0045944 GO:GO:0005667
GO:GO:0004871 GO:GO:0000982 SMART:SM00086 TIGRFAMs:TIGR00229
GeneTree:ENSGT00650000092935 HOGENOM:HOG000234379
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOVERGEN:HBG107503 CTD:56938
eggNOG:NOG288887 KO:K09099 OMA:IPQCNPM EMBL:AY005163 EMBL:AY014836
EMBL:BC108965 EMBL:BC108966 IPI:IPI00129201 IPI:IPI00828642
RefSeq:NP_758513.1 UniGene:Mm.333500 UniGene:Mm.442075
ProteinModelPortal:Q2VPD4 SMR:Q2VPD4 STRING:Q2VPD4
PhosphoSite:Q2VPD4 PRIDE:Q2VPD4 Ensembl:ENSMUST00000080530
Ensembl:ENSMUST00000111639 Ensembl:ENSMUST00000129788 GeneID:272322
KEGG:mmu:272322 UCSC:uc009esj.1 InParanoid:Q2VPD4 OrthoDB:EOG4DFPNB
NextBio:393555 Bgee:Q2VPD4 Genevestigator:Q2VPD4 Uniprot:Q2VPD4
Length = 579
Score = 242 (90.2 bits), Expect = 4.8e-37, Sum P(3) = 4.8e-37
Identities = 52/107 (48%), Positives = 72/107 (67%)
Query: 199 PRERLIDVKSKQVIVGLPVS-RQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKL 257
P+ + S + V P R+ HS++EKRRRDKMN I +LS+M+P + KLDKL
Sbjct: 29 PQNPFASLLSTRTGVSAPSGIREAHSQMEKRRRDKMNHLIQKLSSMIPPHIPTAHKLDKL 88
Query: 258 TVLRMAVQHLKTIRGAVHSYTEGHYKPAFLTDQELKHLILQAAEGFL 304
+VLR AVQ+L+++RG Y + KP+F+ D+EL HLIL+AAEGFL
Sbjct: 89 SVLRRAVQYLRSLRGMTELYLGENSKPSFIQDKELSHLILKAAEGFL 135
Score = 145 (56.1 bits), Expect = 3.2e-16, Sum P(2) = 3.2e-16
Identities = 39/89 (43%), Positives = 49/89 (55%)
Query: 168 QGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQVIVGLPVSRQN-HSEIE 226
Q L+GQ+ FD LHPKDVAKVKEQL S D SPRE+ ID K+ QV R HS
Sbjct: 160 QASLIGQNLFDFLHPKDVAKVKEQL-SCDGSPREKPIDTKTSQVYSHPYTGRPRMHSGSR 218
Query: 227 KRRRDKMNTYITELSAMVPMCHAMSRKLD 255
+ +M + + P C + S+K D
Sbjct: 219 RSFFFRMKSCTVPVKEEQP-CSSCSKKKD 246
Score = 136 (52.9 bits), Expect = 4.8e-37, Sum P(3) = 4.8e-37
Identities = 22/39 (56%), Positives = 32/39 (82%)
Query: 525 YQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNTLIL 563
Y+F+ K G +V L+SEW +F NPWTK++EY++S NTL+L
Sbjct: 374 YKFRVKDGAFVTLKSEWFSFTNPWTKELEYIVSVNTLVL 412
Score = 132 (51.5 bits), Expect = 4.8e-37, Sum P(3) = 4.8e-37
Identities = 40/138 (28%), Positives = 66/138 (47%)
Query: 396 KEEP-DTTTGAAASCH----RKKKQQQSDRKY--SVIQCTGYLKSWAPAKMGLEESEDRK 448
+E+P DT T S H R + S R + + CT +K P ++ + RK
Sbjct: 191 REKPIDTKTSQVYS-HPYTGRPRMHSGSRRSFFFRMKSCTVPVKEEQPCSSCSKKKDHRK 249
Query: 449 YSVIQCTGYLKSWAPAKMXXXXXXXXXXXXXXXXXXXLVAVGRVLADKTRILNKQVNLRP 508
+ + CTGYL+SW P + LVA+GR+ + ++N+RP
Sbjct: 250 FHTVHCTGYLRSW-PLNVVGMEKESGGGKDSGPLTC-LVAMGRLHPYIVPQKSGKINVRP 307
Query: 509 IQFLSRHALDGKFLFVYQ 526
+F++R A++GKF++V Q
Sbjct: 308 AEFITRFAMNGKFVYVDQ 325
Score = 100 (40.3 bits), Expect = 7.1e-21, Sum P(3) = 7.1e-21
Identities = 19/38 (50%), Positives = 27/38 (71%)
Query: 297 LQAAEGFLQNHSEIEKRRRDKMNTYITELSAMVPTLLP 334
+ A G + HS++EKRRRDKMN I +LS+M+P +P
Sbjct: 43 VSAPSGIREAHSQMEKRRRDKMNHLIQKLSSMIPPHIP 80
Score = 49 (22.3 bits), Expect = 1.9e-28, Sum P(3) = 1.9e-28
Identities = 10/15 (66%), Positives = 12/15 (80%)
Query: 346 RLCPGARRSFFCRMK 360
R+ G+RRSFF RMK
Sbjct: 212 RMHSGSRRSFFFRMK 226
Score = 42 (19.8 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 13/48 (27%), Positives = 24/48 (50%)
Query: 157 QHGCAISDLSAQGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLI 204
Q AI Q ELLG S ++ H D + + ++ + L +E+++
Sbjct: 325 QRATAILGYLPQ-ELLGTSCYEYFHQDDHSSLTDK-HKAVLQSKEKIL 370
>UNIPROTKB|E9PPV4 [details] [associations]
symbol:ARNTL "Aryl hydrocarbon receptor nuclear
translocator-like protein 1" species:9606 "Homo sapiens"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] InterPro:IPR001067
InterPro:IPR011598 Pfam:PF00010 PRINTS:PR00785 PROSITE:PS50888
SMART:SM00353 GO:GO:0005737 GO:GO:0003700 GO:GO:0005667
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC016884 EMBL:AC022878
HGNC:HGNC:701 IPI:IPI00978797 ProteinModelPortal:E9PPV4 SMR:E9PPV4
Ensembl:ENST00000530357 ArrayExpress:E9PPV4 Bgee:E9PPV4
Uniprot:E9PPV4
Length = 141
Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 63/87 (72%), Positives = 79/87 (90%)
Query: 218 SRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSY 277
+R+ HS+IEKRRRDKMN++I EL+++VP C+AMSRKLDKLTVLRMAVQH+KT+RGA + Y
Sbjct: 30 AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY 89
Query: 278 TEGHYKPAFLTDQELKHLILQAAEGFL 304
TE +YKP FL+D ELKHLIL+AA+GFL
Sbjct: 90 TEANYKPTFLSDDELKHLILRAADGFL 116
Score = 106 (42.4 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 25/50 (50%), Positives = 36/50 (72%)
Query: 288 TDQELKHLILQAAE--GFLQN----HSEIEKRRRDKMNTYITELSAMVPT 331
TD++ H L+ E G ++N HS+IEKRRRDKMN++I EL+++VPT
Sbjct: 9 TDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPT 58
>UNIPROTKB|C8YTM6 [details] [associations]
symbol:aha-1 "AHA-1" species:31234 "Caenorhabditis remanei"
[GO:0001708 "cell fate specification" evidence=ISS] [GO:0003677
"DNA binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0009410 "response to xenobiotic stimulus"
evidence=ISS] [GO:0040010 "positive regulation of growth rate"
evidence=ISS] [GO:0040011 "locomotion" evidence=ISS] [GO:0040017
"positive regulation of locomotion" evidence=ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005634 GO:GO:0001708
GO:GO:0005737 GO:GO:0040010 GO:GO:0003677 GO:GO:0045944
GO:GO:0040011 GO:GO:0040017 GO:GO:0003700 GO:GO:0005667
GO:GO:0006366 GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229
eggNOG:NOG293303 GO:GO:0009410 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:FJ804774 EMBL:FJ804775 EMBL:FJ804776 EMBL:FJ804777
EMBL:FJ804778 EMBL:FJ804779 EMBL:FJ804781 EMBL:FJ804783
EMBL:FJ804784 EMBL:FJ804785 EMBL:FJ804787 EMBL:FJ804788
EMBL:FJ804789 Uniprot:C8YTM6
Length = 398
Score = 290 (107.1 bits), Expect = 1.1e-30, Sum P(3) = 1.1e-30
Identities = 59/88 (67%), Positives = 70/88 (79%)
Query: 218 SRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHS- 276
+R+NHSEIE+RRR+KM YI EL+ MVP C ++ RK DKLT+LRMAV H+K IRG HS
Sbjct: 22 ARENHSEIERRRRNKMTHYINELAEMVPQCASLGRKPDKLTILRMAVSHMKGIRG--HSA 79
Query: 277 YTEGHYKPAFLTDQELKHLILQAAEGFL 304
E YKP+FLTDQELKHLIL+AA GFL
Sbjct: 80 QDETSYKPSFLTDQELKHLILEAANGFL 107
Score = 96 (38.9 bits), Expect = 0.00093, Sum P(3) = 0.00093
Identities = 18/26 (69%), Positives = 22/26 (84%)
Query: 305 QNHSEIEKRRRDKMNTYITELSAMVP 330
+NHSEIE+RRR+KM YI EL+ MVP
Sbjct: 24 ENHSEIERRRRNKMTHYINELAEMVP 49
Score = 59 (25.8 bits), Expect = 1.1e-30, Sum P(3) = 1.1e-30
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 404 GAAASCHRKKKQ----QQSDRKYSVIQCTGYLKSWAP 436
GA HR + + Q + + Y V+ CTGY+K+ P
Sbjct: 198 GALEPLHRLRNRRPLFQHAGQNYVVMHCTGYIKNAPP 234
Score = 49 (22.3 bits), Expect = 1.2e-29, Sum P(3) = 1.2e-29
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 447 RKYSVIQCTGYLKSWAP 463
+ Y V+ CTGY+K+ P
Sbjct: 218 QNYVVMHCTGYIKNAPP 234
Score = 41 (19.5 bits), Expect = 1.1e-30, Sum P(3) = 1.1e-30
Identities = 7/23 (30%), Positives = 16/23 (69%)
Query: 539 SEWKNFRNPWTKDIEYLISKNTL 561
S +K F NP+++ EY+++ + +
Sbjct: 344 SAYK-FMNPYSEQFEYVVATHQI 365
>UNIPROTKB|C8YTN2 [details] [associations]
symbol:aha-1 "AHA-1" species:31234 "Caenorhabditis remanei"
[GO:0001708 "cell fate specification" evidence=ISS] [GO:0003677
"DNA binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0009410 "response to xenobiotic stimulus"
evidence=ISS] [GO:0040010 "positive regulation of growth rate"
evidence=ISS] [GO:0040011 "locomotion" evidence=ISS] [GO:0040017
"positive regulation of locomotion" evidence=ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005634 GO:GO:0001708
GO:GO:0005737 GO:GO:0040010 GO:GO:0003677 GO:GO:0045944
GO:GO:0040011 GO:GO:0040017 GO:GO:0003700 GO:GO:0005667
GO:GO:0006366 GO:GO:0004871 SMART:SM00086 GO:GO:0009410
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:FJ804780 EMBL:FJ804782
Uniprot:C8YTN2
Length = 398
Score = 290 (107.1 bits), Expect = 1.1e-30, Sum P(3) = 1.1e-30
Identities = 59/88 (67%), Positives = 70/88 (79%)
Query: 218 SRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHS- 276
+R+NHSEIE+RRR+KM YI EL+ MVP C ++ RK DKLT+LRMAV H+K IRG HS
Sbjct: 22 ARENHSEIERRRRNKMTHYINELAEMVPQCASLGRKPDKLTILRMAVSHMKGIRG--HSA 79
Query: 277 YTEGHYKPAFLTDQELKHLILQAAEGFL 304
E YKP+FLTDQELKHLIL+AA GFL
Sbjct: 80 QDETSYKPSFLTDQELKHLILEAANGFL 107
Score = 96 (38.9 bits), Expect = 0.00093, Sum P(3) = 0.00093
Identities = 18/26 (69%), Positives = 22/26 (84%)
Query: 305 QNHSEIEKRRRDKMNTYITELSAMVP 330
+NHSEIE+RRR+KM YI EL+ MVP
Sbjct: 24 ENHSEIERRRRNKMTHYINELAEMVP 49
Score = 59 (25.8 bits), Expect = 1.1e-30, Sum P(3) = 1.1e-30
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 404 GAAASCHRKKKQ----QQSDRKYSVIQCTGYLKSWAP 436
GA HR + + Q + + Y V+ CTGY+K+ P
Sbjct: 198 GALEPLHRLRNRRPLFQHAGQNYVVMHCTGYIKNAPP 234
Score = 49 (22.3 bits), Expect = 1.2e-29, Sum P(3) = 1.2e-29
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 447 RKYSVIQCTGYLKSWAP 463
+ Y V+ CTGY+K+ P
Sbjct: 218 QNYVVMHCTGYIKNAPP 234
Score = 41 (19.5 bits), Expect = 1.1e-30, Sum P(3) = 1.1e-30
Identities = 7/23 (30%), Positives = 16/23 (69%)
Query: 539 SEWKNFRNPWTKDIEYLISKNTL 561
S +K F NP+++ EY+++ + +
Sbjct: 344 SAYK-FMNPYSEQFEYVVATHQI 365
>UNIPROTKB|Q9DG35 [details] [associations]
symbol:BMAL1 "BHLH-PAS transcription factor BMAL1"
species:9031 "Gallus gallus" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0000060 "protein import into nucleus, translocation"
evidence=IEA] [GO:0000982 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0001190 "RNA polymerase II transcription factor
binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0016604 "nuclear body" evidence=IEA] [GO:0017162
"aryl hydrocarbon receptor binding" evidence=IEA] [GO:0032922
"circadian regulation of gene expression" evidence=IEA] [GO:0042176
"regulation of protein catabolic process" evidence=IEA] [GO:0043425
"bHLH transcription factor binding" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0051879
"Hsp90 protein binding" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 PRINTS:PR00785 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 GO:GO:0005737
GO:GO:0003677 GO:GO:0007623 GO:GO:0005667 GO:GO:0000060
GO:GO:0004871 GO:GO:0000982 TIGRFAMs:TIGR00229 GO:GO:0001190
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0042176 HOVERGEN:HBG000164 UniGene:Gga.1329 EMBL:AADN02030623
EMBL:AF193070 IPI:IPI00679553 STRING:Q9DG35
Ensembl:ENSGALT00000008634 HOGENOM:HOG000199297 InParanoid:Q9DG35
Uniprot:Q9DG35
Length = 127
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 61/80 (76%), Positives = 74/80 (92%)
Query: 225 IEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSYTEGHYKP 284
IEKRRRDKMN++I EL+++VP C+AMSRKLDKLTVLRMAVQH+KT+RGA + YTE +YKP
Sbjct: 1 IEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPYTEANYKP 60
Query: 285 AFLTDQELKHLILQAAEGFL 304
AFL+D ELKHLIL+AA+GFL
Sbjct: 61 AFLSDDELKHLILRAADGFL 80
Score = 94 (38.1 bits), Expect = 0.00083, P = 0.00083
Identities = 17/24 (70%), Positives = 21/24 (87%)
Query: 167 AQGELLGQSWFDILHPKDVAKVKE 190
+Q +L+GQS FD LHPKD+AKVKE
Sbjct: 104 SQNDLIGQSLFDYLHPKDIAKVKE 127
>UNIPROTKB|G3N3F0 [details] [associations]
symbol:G3N3F0 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 PRINTS:PR00785 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 GO:GO:0005737
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:DAAA02052316 OMA:ENSMTGQ EMBL:DAAA02052315
Ensembl:ENSBTAT00000064165 Uniprot:G3N3F0
Length = 207
Score = 318 (117.0 bits), Expect = 1.6e-28, P = 1.6e-28
Identities = 60/87 (68%), Positives = 75/87 (86%)
Query: 218 SRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSY 277
SR+NHSEIE+RRR+KM YITELS MVP C A++RK DKLT+LRMAV H+K++RG +
Sbjct: 54 SRENHSEIERRRRNKMTQYITELSDMVPTCSALARKPDKLTILRMAVSHMKSMRGTGNKS 113
Query: 278 TEGHYKPAFLTDQELKHLILQAAEGFL 304
T+G YKP+FLT+QELKHLIL+AA+GFL
Sbjct: 114 TDGAYKPSFLTEQELKHLILEAADGFL 140
>UNIPROTKB|F1RIF2 [details] [associations]
symbol:ARNT2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0017162 "aryl hydrocarbon
receptor binding" evidence=IEA] [GO:0007417 "central nervous system
development" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 PRINTS:PR00785 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 GO:GO:0005737
GO:GO:0003677 GO:GO:0001701 GO:GO:0045944 GO:GO:0007417
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CT757497 EMBL:CT841532 Ensembl:ENSSSCT00000001996 OMA:ENSMTGQ
Uniprot:F1RIF2
Length = 208
Score = 318 (117.0 bits), Expect = 1.6e-28, P = 1.6e-28
Identities = 60/87 (68%), Positives = 75/87 (86%)
Query: 218 SRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSY 277
SR+NHSEIE+RRR+KM YITELS MVP C A++RK DKLT+LRMAV H+K++RG +
Sbjct: 55 SRENHSEIERRRRNKMTQYITELSDMVPTCSALARKPDKLTILRMAVSHMKSMRGTGNKS 114
Query: 278 TEGHYKPAFLTDQELKHLILQAAEGFL 304
T+G YKP+FLT+QELKHLIL+AA+GFL
Sbjct: 115 TDGAYKPSFLTEQELKHLILEAADGFL 141
>UNIPROTKB|E3MG64 [details] [associations]
symbol:Cre-aha-1 "CRE-AHA-1 protein" species:31234
"Caenorhabditis remanei" [GO:0001708 "cell fate specification"
evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0009410 "response to
xenobiotic stimulus" evidence=ISS] [GO:0040010 "positive regulation
of growth rate" evidence=ISS] [GO:0040011 "locomotion"
evidence=ISS] [GO:0040017 "positive regulation of locomotion"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0043565
"sequence-specific DNA binding" evidence=ISS] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 PRINTS:PR00785 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005634 GO:GO:0001708 GO:GO:0005737 GO:GO:0040010
GO:GO:0003677 GO:GO:0045944 GO:GO:0040011 GO:GO:0040017
GO:GO:0003700 GO:GO:0005667 GO:GO:0006366 GO:GO:0004871
SMART:SM00086 OMA:MGENKER GO:GO:0009410 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:DS268443 RefSeq:XP_003104870.1
EnsemblMetazoa:CRE23963 GeneID:9809261 CTD:9809261 Uniprot:E3MG64
Length = 451
Score = 290 (107.1 bits), Expect = 2.8e-27, Sum P(3) = 2.8e-27
Identities = 59/88 (67%), Positives = 70/88 (79%)
Query: 218 SRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHS- 276
+R+NHSEIE+RRR+KM YI EL+ MVP C ++ RK DKLT+LRMAV H+K IRG HS
Sbjct: 44 ARENHSEIERRRRNKMTHYINELAEMVPQCASLGRKPDKLTILRMAVSHMKGIRG--HSA 101
Query: 277 YTEGHYKPAFLTDQELKHLILQAAEGFL 304
E YKP+FLTDQELKHLIL+AA GFL
Sbjct: 102 QDETSYKPSFLTDQELKHLILEAANGFL 129
Score = 59 (25.8 bits), Expect = 2.8e-27, Sum P(3) = 2.8e-27
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 404 GAAASCHRKKKQ----QQSDRKYSVIQCTGYLKSWAP 436
GA HR + + Q + + Y V+ CTGY+K+ P
Sbjct: 220 GALEPLHRLRNRRPLFQHAGQNYVVMHCTGYIKNAPP 256
Score = 49 (22.3 bits), Expect = 3.0e-26, Sum P(3) = 3.0e-26
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 447 RKYSVIQCTGYLKSWAP 463
+ Y V+ CTGY+K+ P
Sbjct: 240 QNYVVMHCTGYIKNAPP 256
Score = 41 (19.5 bits), Expect = 2.8e-27, Sum P(3) = 2.8e-27
Identities = 7/23 (30%), Positives = 16/23 (69%)
Query: 539 SEWKNFRNPWTKDIEYLISKNTL 561
S +K F NP+++ EY+++ + +
Sbjct: 366 SAYK-FMNPYSEQFEYVVATHQI 387
>UNIPROTKB|G0P4X6 [details] [associations]
symbol:CAEBREN_20344 "Putative uncharacterized protein"
species:135651 "Caenorhabditis brenneri" [GO:0001708 "cell fate
specification" evidence=ISS] [GO:0003677 "DNA binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0009410 "response to xenobiotic stimulus" evidence=ISS]
[GO:0040010 "positive regulation of growth rate" evidence=ISS]
[GO:0040011 "locomotion" evidence=ISS] [GO:0040017 "positive
regulation of locomotion" evidence=ISS] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005634 GO:GO:0001708
GO:GO:0005737 GO:GO:0040010 GO:GO:0003677 GO:GO:0045944
GO:GO:0040011 GO:GO:0040017 GO:GO:0003700 GO:GO:0005667
GO:GO:0006366 GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229
OMA:MGENKER GO:GO:0009410 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:GL380070 EnsemblMetazoa:CBN20344 EnsemblMetazoa:CBN21788
Uniprot:G0P4X6
Length = 451
Score = 289 (106.8 bits), Expect = 4.2e-27, Sum P(3) = 4.2e-27
Identities = 59/88 (67%), Positives = 70/88 (79%)
Query: 218 SRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSY 277
+R+NHSEIE+RRR+KM YI EL+ MVP C ++ RK DKLT+LRMAV H+K IRG HS
Sbjct: 44 ARENHSEIERRRRNKMTHYINELAEMVPQCASLGRKPDKLTILRMAVSHMKGIRG--HSA 101
Query: 278 T-EGHYKPAFLTDQELKHLILQAAEGFL 304
E YKP+FLTDQELKHLIL+AA GFL
Sbjct: 102 PDETSYKPSFLTDQELKHLILEAANGFL 129
Score = 59 (25.8 bits), Expect = 4.2e-27, Sum P(3) = 4.2e-27
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 404 GAAASCHRKKKQ----QQSDRKYSVIQCTGYLKSWAP 436
GA HR + + Q + + Y V+ CTGY+K+ P
Sbjct: 220 GALEPLHRLRNRRPLFQHAGQNYVVMHCTGYIKNAPP 256
Score = 49 (22.3 bits), Expect = 4.5e-26, Sum P(3) = 4.5e-26
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 447 RKYSVIQCTGYLKSWAP 463
+ Y V+ CTGY+K+ P
Sbjct: 240 QNYVVMHCTGYIKNAPP 256
Score = 41 (19.5 bits), Expect = 4.2e-27, Sum P(3) = 4.2e-27
Identities = 7/23 (30%), Positives = 16/23 (69%)
Query: 539 SEWKNFRNPWTKDIEYLISKNTL 561
S +K F NP+++ EY+++ + +
Sbjct: 366 SAYK-FMNPYSEQFEYVVATHQI 387
>WB|WBGene00000095 [details] [associations]
symbol:aha-1 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;IDA] [GO:0005634 "nucleus"
evidence=IEA;IC;IDA] [GO:0004871 "signal transducer activity"
evidence=IEA;ISS] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040017 "positive regulation of locomotion" evidence=IMP]
[GO:0009410 "response to xenobiotic stimulus" evidence=IDA]
[GO:0030522 "intracellular receptor mediated signaling pathway"
evidence=TAS] [GO:0005622 "intracellular" evidence=TAS] [GO:0003677
"DNA binding" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0043565 "sequence-specific DNA binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0001085 "RNA polymerase II transcription factor binding"
evidence=IPI] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005634
GO:GO:0001708 GO:GO:0005737 GO:GO:0040010 GO:GO:0022008
GO:GO:0003677 GO:GO:0045944 GO:GO:0010171 GO:GO:0040011
GO:GO:0040017 GO:GO:0003700 GO:GO:0005667 GO:GO:0006366
GO:GO:0004871 GO:GO:0035176 SMART:SM00086 TIGRFAMs:TIGR00229
EMBL:AF039569 EMBL:Z81038 PIR:T19440 PIR:T42397
RefSeq:NP_001251326.1 RefSeq:NP_001251327.1 UniGene:Cel.19552
ProteinModelPortal:O02219 SMR:O02219 IntAct:O02219 STRING:O02219
PaxDb:O02219 EnsemblMetazoa:C25A1.11a GeneID:172889
KEGG:cel:CELE_C25A1.11 UCSC:C25A1.11 CTD:172889 WormBase:C25A1.11a
WormBase:C25A1.11b eggNOG:NOG293303 GeneTree:ENSGT00650000092935
HOGENOM:HOG000234379 InParanoid:O02219 OMA:MGENKER NextBio:877411
ArrayExpress:O02219 GO:GO:0030522 GO:GO:0009410 Gene3D:4.10.280.10
SUPFAM:SSF47459 Uniprot:O02219
Length = 453
Score = 288 (106.4 bits), Expect = 6.4e-27, Sum P(3) = 6.4e-27
Identities = 57/87 (65%), Positives = 69/87 (79%)
Query: 218 SRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSY 277
+R+NHSEIE+RRR+KM YI EL+ MVP C ++ RK DKLT+LRMAV H+K IRG +
Sbjct: 45 ARENHSEIERRRRNKMTHYINELAEMVPQCASLGRKPDKLTILRMAVSHMKGIRGHT-AQ 103
Query: 278 TEGHYKPAFLTDQELKHLILQAAEGFL 304
E YKP+FLTDQELKHLIL+AA GFL
Sbjct: 104 DETSYKPSFLTDQELKHLILEAANGFL 130
Score = 59 (25.8 bits), Expect = 6.4e-27, Sum P(3) = 6.4e-27
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 404 GAAASCHRKKKQ----QQSDRKYSVIQCTGYLKSWAP 436
GA HR + + Q + + Y V+ CTGY+K+ P
Sbjct: 221 GALEPLHRLRNRRPLFQHAGQNYVVMHCTGYIKNAPP 257
Score = 49 (22.3 bits), Expect = 6.9e-26, Sum P(3) = 6.9e-26
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 447 RKYSVIQCTGYLKSWAP 463
+ Y V+ CTGY+K+ P
Sbjct: 241 QNYVVMHCTGYIKNAPP 257
Score = 41 (19.5 bits), Expect = 6.4e-27, Sum P(3) = 6.4e-27
Identities = 7/23 (30%), Positives = 16/23 (69%)
Query: 539 SEWKNFRNPWTKDIEYLISKNTL 561
S +K F NP+++ EY+++ + +
Sbjct: 367 SAYK-FMNPYSEQFEYVVATHQI 388
>UNIPROTKB|O02219 [details] [associations]
symbol:aha-1 "Aryl hydrocarbon receptor nuclear
translocator homolog" species:6239 "Caenorhabditis elegans"
[GO:0005515 "protein binding" evidence=IPI] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0035176 "social behavior"
evidence=IMP] [GO:0001708 "cell fate specification" evidence=IMP]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005634 GO:GO:0001708
GO:GO:0005737 GO:GO:0040010 GO:GO:0022008 GO:GO:0003677
GO:GO:0045944 GO:GO:0010171 GO:GO:0040011 GO:GO:0040017
GO:GO:0003700 GO:GO:0005667 GO:GO:0006366 GO:GO:0004871
GO:GO:0035176 SMART:SM00086 TIGRFAMs:TIGR00229 EMBL:AF039569
EMBL:Z81038 PIR:T19440 PIR:T42397 RefSeq:NP_001251326.1
RefSeq:NP_001251327.1 UniGene:Cel.19552 ProteinModelPortal:O02219
SMR:O02219 IntAct:O02219 STRING:O02219 PaxDb:O02219
EnsemblMetazoa:C25A1.11a GeneID:172889 KEGG:cel:CELE_C25A1.11
UCSC:C25A1.11 CTD:172889 WormBase:C25A1.11a WormBase:C25A1.11b
eggNOG:NOG293303 GeneTree:ENSGT00650000092935 HOGENOM:HOG000234379
InParanoid:O02219 OMA:MGENKER NextBio:877411 ArrayExpress:O02219
GO:GO:0030522 GO:GO:0009410 Gene3D:4.10.280.10 SUPFAM:SSF47459
Uniprot:O02219
Length = 453
Score = 288 (106.4 bits), Expect = 6.4e-27, Sum P(3) = 6.4e-27
Identities = 57/87 (65%), Positives = 69/87 (79%)
Query: 218 SRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSY 277
+R+NHSEIE+RRR+KM YI EL+ MVP C ++ RK DKLT+LRMAV H+K IRG +
Sbjct: 45 ARENHSEIERRRRNKMTHYINELAEMVPQCASLGRKPDKLTILRMAVSHMKGIRGHT-AQ 103
Query: 278 TEGHYKPAFLTDQELKHLILQAAEGFL 304
E YKP+FLTDQELKHLIL+AA GFL
Sbjct: 104 DETSYKPSFLTDQELKHLILEAANGFL 130
Score = 59 (25.8 bits), Expect = 6.4e-27, Sum P(3) = 6.4e-27
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 404 GAAASCHRKKKQ----QQSDRKYSVIQCTGYLKSWAP 436
GA HR + + Q + + Y V+ CTGY+K+ P
Sbjct: 221 GALEPLHRLRNRRPLFQHAGQNYVVMHCTGYIKNAPP 257
Score = 49 (22.3 bits), Expect = 6.9e-26, Sum P(3) = 6.9e-26
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 447 RKYSVIQCTGYLKSWAP 463
+ Y V+ CTGY+K+ P
Sbjct: 241 QNYVVMHCTGYIKNAPP 257
Score = 41 (19.5 bits), Expect = 6.4e-27, Sum P(3) = 6.4e-27
Identities = 7/23 (30%), Positives = 16/23 (69%)
Query: 539 SEWKNFRNPWTKDIEYLISKNTL 561
S +K F NP+++ EY+++ + +
Sbjct: 367 SAYK-FMNPYSEQFEYVVATHQI 388
>UNIPROTKB|A8XEY9 [details] [associations]
symbol:aha-1 "Protein CBR-AHA-1" species:6238
"Caenorhabditis briggsae" [GO:0001708 "cell fate specification"
evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0009410 "response to
xenobiotic stimulus" evidence=ISS] [GO:0040010 "positive regulation
of growth rate" evidence=ISS] [GO:0040011 "locomotion"
evidence=ISS] [GO:0040017 "positive regulation of locomotion"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0043565
"sequence-specific DNA binding" evidence=ISS] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 PRINTS:PR00785 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005634 GO:GO:0001708 GO:GO:0005737 GO:GO:0040010
GO:GO:0003677 GO:GO:0045944 GO:GO:0040011 GO:GO:0040017
GO:GO:0003700 GO:GO:0005667 GO:GO:0006366 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 eggNOG:NOG293303
HOGENOM:HOG000234379 GO:GO:0009410 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:HE600958 EnsemblMetazoa:CBG12219
WormBase:CBG12219 Uniprot:A8XEY9
Length = 468
Score = 260 (96.6 bits), Expect = 2.0e-22, Sum P(3) = 2.0e-22
Identities = 54/82 (65%), Positives = 64/82 (78%)
Query: 224 EIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHS-YTEGHY 282
+IE+RRR+KM YI EL+ MVP C ++ RK DKLT+LRMAV H+K IRG HS E Y
Sbjct: 73 KIERRRRNKMTHYINELAEMVPQCASLGRKPDKLTILRMAVSHMKGIRG--HSAQDETSY 130
Query: 283 KPAFLTDQELKHLILQAAEGFL 304
KP+FLTDQELKHLIL+AA GFL
Sbjct: 131 KPSFLTDQELKHLILEAANGFL 152
Score = 57 (25.1 bits), Expect = 2.0e-22, Sum P(3) = 2.0e-22
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 404 GAAASCHRKKKQ----QQSDRKYSVIQCTGYLKSWAP 436
GA HR + + Q Y V+ CTGY+K+ P
Sbjct: 243 GALEPLHRLRNRRPLFQHGGHNYVVMHCTGYIKNAPP 279
Score = 53 (23.7 bits), Expect = 5.0e-22, Sum P(3) = 5.0e-22
Identities = 28/105 (26%), Positives = 41/105 (39%)
Query: 449 YSVIQCTGYLKSWAPAKMXXXXXXXXXXXXXXXXXXXLVAVGRVLADKTRILNKQVNLRP 508
Y V+ CTGY+K+ AP + LVA+ R+ + +
Sbjct: 265 YVVMHCTGYIKN-APPQ-----------GINAPASSCLVAIARLQVASMPVCADPASAN- 311
Query: 509 IQFLSRHALDGKFLFVYQFKNKGGTYVQLQSE------WKNFRNP 547
QF R A DGK F+ +K G + L S+ W N +P
Sbjct: 312 -QFSVRVAEDGKMTFI---DSKVGDLIGLSSDQLIGRYWWNLAHP 352
Score = 40 (19.1 bits), Expect = 2.0e-22, Sum P(3) = 2.0e-22
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 539 SEWKNFRNPWTKDIEYLIS 557
S +K F NP+++ EY+++
Sbjct: 389 SAYK-FMNPYSEQFEYVVA 406
>UNIPROTKB|E9PKF0 [details] [associations]
symbol:ARNTL "Aryl hydrocarbon receptor nuclear
translocator-like protein 1" species:9606 "Homo sapiens"
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0000060 "protein import
into nucleus, translocation" evidence=IEA] [GO:0000982 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0001190
"RNA polymerase II transcription factor binding transcription
factor activity involved in positive regulation of transcription"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0016604 "nuclear
body" evidence=IEA] [GO:0032922 "circadian regulation of gene
expression" evidence=IEA] [GO:0042176 "regulation of protein
catabolic process" evidence=IEA] [GO:0043425 "bHLH transcription
factor binding" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] InterPro:IPR001067
InterPro:IPR011598 Pfam:PF00010 PRINTS:PR00785 PROSITE:PS50888
SMART:SM00353 GO:GO:0005737 GO:GO:0003677 GO:GO:0007623
GO:GO:0005667 GO:GO:0000060 GO:GO:0000982 GO:GO:0001190
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0042176 EMBL:AC016884
EMBL:AC022878 IPI:IPI00413132 HGNC:HGNC:701
ProteinModelPortal:E9PKF0 SMR:E9PKF0 Ensembl:ENST00000529388
ArrayExpress:E9PKF0 Bgee:E9PKF0 Uniprot:E9PKF0
Length = 135
Score = 243 (90.6 bits), Expect = 5.5e-20, P = 5.5e-20
Identities = 45/62 (72%), Positives = 57/62 (91%)
Query: 218 SRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSY 277
+R+ HS+IEKRRRDKMN++I EL+++VP C+AMSRKLDKLTVLRMAVQH+KT+RGA + Y
Sbjct: 73 AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGATNPY 132
Query: 278 TE 279
TE
Sbjct: 133 TE 134
Score = 110 (43.8 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 26/56 (46%), Positives = 39/56 (69%)
Query: 282 YKPAFLTDQELKHLILQAAE--GFLQN----HSEIEKRRRDKMNTYITELSAMVPT 331
Y+ + TD++ H L+ E G ++N HS+IEKRRRDKMN++I EL+++VPT
Sbjct: 46 YQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPT 101
>UNIPROTKB|K7GSB9 [details] [associations]
symbol:ARNT "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA]
InterPro:IPR001067 InterPro:IPR011598 Pfam:PF00010 PRINTS:PR00785
PROSITE:PS50888 SMART:SM00353 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CU463875
Ensembl:ENSSSCT00000033419 Uniprot:K7GSB9
Length = 133
Score = 233 (87.1 bits), Expect = 6.9e-19, P = 6.9e-19
Identities = 43/67 (64%), Positives = 56/67 (83%)
Query: 218 SRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSY 277
+R+NHSEIE+RRR+KM YITELS MVP C A++RK DKLT+LRMAV H+K++RG ++
Sbjct: 67 ARENHSEIERRRRNKMTAYITELSDMVPTCSALARKPDKLTILRMAVSHMKSLRGTGNTS 126
Query: 278 TEGHYKP 284
T+G YKP
Sbjct: 127 TDGTYKP 133
Score = 110 (43.8 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 21/27 (77%), Positives = 24/27 (88%)
Query: 305 QNHSEIEKRRRDKMNTYITELSAMVPT 331
+NHSEIE+RRR+KM YITELS MVPT
Sbjct: 69 ENHSEIERRRRNKMTAYITELSDMVPT 95
>UNIPROTKB|D4ADP3 [details] [associations]
symbol:D4ADP3 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR001067 InterPro:IPR011598
Pfam:PF00010 PRINTS:PR00785 PROSITE:PS50888 SMART:SM00353
GO:GO:0005737 GO:GO:0007623 GO:GO:0045944 GO:GO:0005667
GO:GO:0000982 GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10
SUPFAM:SSF47459 IPI:IPI00781061 Ensembl:ENSRNOT00000055473
Uniprot:D4ADP3
Length = 547
Score = 241 (89.9 bits), Expect = 4.9e-17, Sum P(2) = 4.9e-17
Identities = 53/107 (49%), Positives = 71/107 (66%)
Query: 199 PRERLIDVKSKQVIVGLPVS-RQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKL 257
PR V S + V +P R+ HS+ EKRRRDKMN I +LS+M+P + KLDKL
Sbjct: 29 PRSPFTSVLSTRTGVAVPNGIREAHSQTEKRRRDKMNHLIWKLSSMIPPHIPTAHKLDKL 88
Query: 258 TVLRMAVQHLKTIRGAVHSYTEGHYKPAFLTDQELKHLILQAAEGFL 304
++LR AVQ+L++ RG Y + KP+F+ D+EL HLIL+AAEGFL
Sbjct: 89 SILRRAVQYLRSQRGMTEFYLGENAKPSFIQDKELSHLILKAAEGFL 135
Score = 38 (18.4 bits), Expect = 4.9e-17, Sum P(2) = 4.9e-17
Identities = 8/31 (25%), Positives = 15/31 (48%)
Query: 527 FKNKGGTYVQLQSEWKNFRNPWTKDIEYLIS 557
F +K ++++ S W R W +Y+ S
Sbjct: 358 FVDKIKQFLRIVSLWYRKRQKWRNSEQYIHS 388
>UNIPROTKB|F1S978 [details] [associations]
symbol:ARNTL "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051879 "Hsp90 protein binding" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0043425 "bHLH transcription factor binding" evidence=IEA]
[GO:0042176 "regulation of protein catabolic process" evidence=IEA]
[GO:0032922 "circadian regulation of gene expression" evidence=IEA]
[GO:0017162 "aryl hydrocarbon receptor binding" evidence=IEA]
[GO:0016604 "nuclear body" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0001190 "RNA polymerase II transcription factor
binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0000982 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0000060
"protein import into nucleus, translocation" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR013655 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 SMART:SM00091 InterPro:IPR001610 GO:GO:0005737
GO:GO:0045944 GO:GO:0003700 GO:GO:0005667 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935
EMBL:CU914667 Ensembl:ENSSSCT00000014634 Uniprot:F1S978
Length = 302
Score = 133 (51.9 bits), Expect = 2.8e-15, Sum P(2) = 2.8e-15
Identities = 20/39 (51%), Positives = 32/39 (82%)
Query: 525 YQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNTLIL 563
Y+FK K G+++ L+S W +F NPWTK++EY++S NT++L
Sbjct: 131 YKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVL 169
Score = 130 (50.8 bits), Expect = 2.8e-15, Sum P(2) = 2.8e-15
Identities = 31/83 (37%), Positives = 47/83 (56%)
Query: 446 DRK-YSVIQCTGYLKSWAPAKMXXXXXXXXXXXXXXXXXXXLVAVGRVLADKT-RILNKQ 503
DRK + I TGYLKSW P KM LVA+GR+ + + +N +
Sbjct: 2 DRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSC--LVAIGRLHSHMVPQPVNGE 59
Query: 504 VNLRPIQFLSRHALDGKFLFVYQ 526
+ ++ ++++SRHA+DGKF+FV Q
Sbjct: 60 IRVKSMEYVSRHAIDGKFVFVDQ 82
Score = 90 (36.7 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 17/30 (56%), Positives = 21/30 (70%)
Query: 418 SDRK-YSVIQCTGYLKSWAPAKMGLEESED 446
+DRK + I TGYLKSW P KMGL+E +
Sbjct: 1 ADRKSFCTIHSTGYLKSWPPTKMGLDEDNE 30
Score = 45 (20.9 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 170 ELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERL 203
ELLG S ++ H D+ + E L RE++
Sbjct: 94 ELLGTSCYEYFHQDDIGHLAE-CHRQVLQTREKI 126
>UNIPROTKB|E9PI92 [details] [associations]
symbol:ARNTL "Aryl hydrocarbon receptor nuclear
translocator-like protein 1" species:9606 "Homo sapiens"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] InterPro:IPR001067
InterPro:IPR011598 Pfam:PF00010 PRINTS:PR00785 PROSITE:PS50888
SMART:SM00353 GO:GO:0005737 GO:GO:0003700 GO:GO:0005667
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC016884 EMBL:AC022878
HGNC:HGNC:701 IPI:IPI00977551 ProteinModelPortal:E9PI92 SMR:E9PI92
Ensembl:ENST00000482049 ArrayExpress:E9PI92 Bgee:E9PI92
Uniprot:E9PI92
Length = 72
Score = 166 (63.5 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 31/43 (72%), Positives = 40/43 (93%)
Query: 218 SRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVL 260
+R+ HS+IEKRRRDKMN++I EL+++VP C+AMSRKLDKLTVL
Sbjct: 30 AREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVL 72
Score = 106 (42.4 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 25/50 (50%), Positives = 36/50 (72%)
Query: 288 TDQELKHLILQAAE--GFLQN----HSEIEKRRRDKMNTYITELSAMVPT 331
TD++ H L+ E G ++N HS+IEKRRRDKMN++I EL+++VPT
Sbjct: 9 TDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPT 58
>UNIPROTKB|H0YKW1 [details] [associations]
symbol:ARNT2 "Aryl hydrocarbon receptor nuclear
translocator 2" species:9606 "Homo sapiens" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0001666 "response to hypoxia" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0007417 "central nervous system development"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0017162 "aryl hydrocarbon receptor
binding" evidence=IEA] [GO:0032355 "response to estradiol stimulus"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
InterPro:IPR001067 PRINTS:PR00785 GO:GO:0005737 GO:GO:0043066
GO:GO:0032355 GO:GO:0003677 GO:GO:0008284 GO:GO:0001701
GO:GO:0001666 GO:GO:0045944 GO:GO:0007417 GO:GO:0003700
GO:GO:0005667 HGNC:HGNC:16876 ChiTaRS:ARNT2 EMBL:AC016705
EMBL:AC108451 Ensembl:ENST00000525103 Bgee:H0YKW1 Uniprot:H0YKW1
Length = 130
Score = 110 (43.8 bits), Expect = 9.0e-11, Sum P(2) = 9.0e-11
Identities = 27/87 (31%), Positives = 41/87 (47%)
Query: 439 MGLEESEDRKYSVIQCTGYLKSWAPAKMXXXXXXXXXXXXXXXXXXXLVAVGRVLADKTR 498
+G + + +Y+V+ CTGY+K+W PA M LVA+GR+ +
Sbjct: 41 LGPVKEGEAQYAVVHCTGYIKAWPPAGMTIPEEDADVGQGSKYC---LVAIGRLQVTSSP 97
Query: 499 ILNKQVNLR-PIQFLSRHALDGKFLFV 524
+ + P +FLSRH DG FV
Sbjct: 98 VCMDMNGMSVPTEFLSRHNSDGIITFV 124
Score = 85 (35.0 bits), Expect = 6.9e-06, Sum P(2) = 6.9e-06
Identities = 12/30 (40%), Positives = 22/30 (73%)
Query: 416 QQSDRKYSVIQCTGYLKSWAPAKMGLEESE 445
++ + +Y+V+ CTGY+K+W PA M + E +
Sbjct: 45 KEGEAQYAVVHCTGYIKAWPPAGMTIPEED 74
Score = 71 (30.1 bits), Expect = 9.0e-11, Sum P(2) = 9.0e-11
Identities = 11/16 (68%), Positives = 14/16 (87%)
Query: 346 RLCPGARRSFFCRMKC 361
R+C G+RRSF CRM+C
Sbjct: 2 RMCMGSRRSFICRMRC 17
>UNIPROTKB|H0YER9 [details] [associations]
symbol:ARNTL "Aryl hydrocarbon receptor nuclear
translocator-like protein 1" species:9606 "Homo sapiens"
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000014 InterPro:IPR013655 Pfam:PF08447 PROSITE:PS50112
InterPro:IPR001610 GO:GO:0006355 GO:GO:0004871 SMART:SM00086
EMBL:AC016884 EMBL:AC022878 HGNC:HGNC:701 Ensembl:ENST00000524392
Bgee:H0YER9 Uniprot:H0YER9
Length = 171
Score = 133 (51.9 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 20/39 (51%), Positives = 32/39 (82%)
Query: 525 YQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNTLIL 563
Y+FK K G+++ L+S W +F NPWTK++EY++S NT++L
Sbjct: 49 YKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVL 87
Score = 45 (20.9 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 170 ELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERL 203
ELLG S ++ H D+ + E L RE++
Sbjct: 12 ELLGTSCYEYFHQDDIGHLAE-CHRQVLQTREKI 44
>UNIPROTKB|H7C0J4 [details] [associations]
symbol:NPAS2 "Neuronal PAS domain-containing protein 2"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 Pfam:PF00010 PRINTS:PR00785 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00353 GO:GO:0005737 GO:GO:0003700
GO:GO:0005667 GO:GO:0004871 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC016738 EMBL:AC092168 EMBL:AC106891 HGNC:HGNC:7895
ChiTaRS:NPAS2 ProteinModelPortal:H7C0J4 Ensembl:ENST00000451740
Bgee:H7C0J4 Uniprot:H7C0J4
Length = 107
Score = 137 (53.3 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 34/85 (40%), Positives = 52/85 (61%)
Query: 226 EKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGA-VHSYTE----- 279
EK+RRD+ N I ELS+M+P +RK+DK TVL + L+ G V + TE
Sbjct: 2 EKKRRDQFNVLIKELSSMLP---GNTRKMDKTTVLEKVIGFLQKHNGKEVSAQTEICDIQ 58
Query: 280 GHYKPAFLTDQELKHLILQAAEGFL 304
+KP+FL+++E L+L+A +GF+
Sbjct: 59 QDWKPSFLSNEEFTQLMLEALDGFI 83
>UNIPROTKB|C9JK03 [details] [associations]
symbol:CLOCK "Circadian locomoter output cycles protein
kaput" species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0000982
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0001190 "RNA polymerase II transcription factor binding
transcription factor activity involved in positive regulation of
transcription" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0032922 "circadian regulation of gene expression" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
GO:GO:0005737 GO:GO:0003677 GO:GO:0009649 GO:GO:0005667
GO:GO:0004871 GO:GO:0000982 GO:GO:0032922 GO:GO:0001190
Gene3D:4.10.280.10 SUPFAM:SSF47459 HGNC:HGNC:2082 EMBL:AC069200
EMBL:AC024243 EMBL:AC110372 IPI:IPI00853422
ProteinModelPortal:C9JK03 SMR:C9JK03 STRING:C9JK03
Ensembl:ENST00000435527 HOGENOM:HOG000171249 ArrayExpress:C9JK03
Bgee:C9JK03 Uniprot:C9JK03
Length = 182
Score = 134 (52.2 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 39/123 (31%), Positives = 62/123 (50%)
Query: 192 LFSSDLSPRERLIDVKSKQVIVGL-------PVSRQNHSEIEKRRRDKMNTYITELSAMV 244
LF+ S ++D + GL R + ++ EK+RRD+ N I EL +M+
Sbjct: 2 LFTVSCSKMSSIVDRDDSSIFDGLVEEDDKDKAKRVSRNKSEKKRRDQFNVLIKELGSML 61
Query: 245 PMCHAMSRKLDKLTVLRMAVQHL---KTIRGAVH-SYTEGHYKPAFLTDQELKHLILQAA 300
P +RK+DK TVL+ ++ L K I S +KP FL+++E L+L+A
Sbjct: 62 P---GNARKMDKSTVLQKSIDFLRKHKEITAQSDASEIRQDWKPTFLSNEEFTQLMLEAL 118
Query: 301 EGF 303
+GF
Sbjct: 119 DGF 121
>UNIPROTKB|J9P4Q7 [details] [associations]
symbol:NPAS2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AAEX03007435
Ensembl:ENSCAFT00000047996 Uniprot:J9P4Q7
Length = 668
Score = 142 (55.0 bits), Expect = 5.8e-08, Sum P(3) = 5.8e-08
Identities = 34/91 (37%), Positives = 55/91 (60%)
Query: 219 RQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSYT 278
R + ++ EK+RRD+ N I ELS+M+P +RK+DK TVL + L+ V + T
Sbjct: 1 RASRNKSEKKRRDQFNVLIKELSSMLP---GNTRKMDKTTVLEKVIGFLQKHNVEVSAQT 57
Query: 279 E-----GHYKPAFLTDQELKHLILQAAEGFL 304
E +KP+FL+++E L+L+A +GF+
Sbjct: 58 EICDIQQDWKPSFLSNEEFTQLMLEALDGFI 88
Score = 51 (23.0 bits), Expect = 5.8e-08, Sum P(3) = 5.8e-08
Identities = 9/15 (60%), Positives = 13/15 (86%)
Query: 510 QFLSRHALDGKFLFV 524
+F SRH+L+ KFLF+
Sbjct: 241 EFTSRHSLEWKFLFL 255
Score = 50 (22.7 bits), Expect = 5.8e-08, Sum P(3) = 5.8e-08
Identities = 8/38 (21%), Positives = 21/38 (55%)
Query: 525 YQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNTLI 562
Y+F KG ++ LQ+ + + W E+++ ++++
Sbjct: 305 YRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTHSVV 342
>UNIPROTKB|H7BZA3 [details] [associations]
symbol:NPAS2 "Neuronal PAS domain-containing protein 2"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005737
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC016738 EMBL:AC092168 EMBL:AC106891
HGNC:HGNC:7895 ChiTaRS:NPAS2 ProteinModelPortal:H7BZA3
Ensembl:ENST00000448812 Uniprot:H7BZA3
Length = 258
Score = 135 (52.6 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 33/89 (37%), Positives = 54/89 (60%)
Query: 221 NHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSYTE- 279
+ ++ EK+RRD+ N I ELS+M+P +RK+DK TVL + L+ V + TE
Sbjct: 3 SRNKSEKKRRDQFNVLIKELSSMLP---GNTRKMDKTTVLEKVIGFLQK-HNEVSAQTEI 58
Query: 280 ----GHYKPAFLTDQELKHLILQAAEGFL 304
+KP+FL+++E L+L+A +GF+
Sbjct: 59 CDIQQDWKPSFLSNEEFTQLMLEALDGFI 87
Score = 50 (22.7 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 8/38 (21%), Positives = 21/38 (55%)
Query: 525 YQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNTLI 562
Y+F KG ++ LQ+ + + W E+++ ++++
Sbjct: 201 YRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTHSVV 238
>RGD|1309681 [details] [associations]
symbol:Npas2 "neuronal PAS domain protein 2" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA;ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0042745 "circadian
sleep/wake cycle" evidence=IEA;ISO] [GO:0045475 "locomotor rhythm"
evidence=IEA;ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0051879 "Hsp90
protein binding" evidence=IEA;ISO] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 RGD:1309681 GO:GO:0005737
GO:GO:0003677 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351
GO:GO:0005667 GO:GO:0004871 GO:GO:0045475 SMART:SM00086
TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10
SUPFAM:SSF47459 CTD:4862 KO:K09026 GO:GO:0042745 IPI:IPI00870127
RefSeq:NP_001101684.2 UniGene:Rn.8285 Ensembl:ENSRNOT00000059571
GeneID:316351 KEGG:rno:316351 UCSC:RGD:1309681 NextBio:670757
Uniprot:F1MAG2
Length = 816
Score = 140 (54.3 bits), Expect = 2.1e-07, Sum P(3) = 2.1e-07
Identities = 35/91 (38%), Positives = 55/91 (60%)
Query: 219 RQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSYT 278
R + ++ EK+RRD+ N I ELS+M+P +RKLDK TVL + L+ V + T
Sbjct: 11 RASRNKSEKKRRDQFNVLIKELSSMLP---GNTRKLDKTTVLEKVIGFLQK-HNEVSAQT 66
Query: 279 E-----GHYKPAFLTDQELKHLILQAAEGFL 304
E +KP+FL+++E L+L+A +GF+
Sbjct: 67 EICDIQQDWKPSFLSNEEFTQLMLEALDGFV 97
Score = 51 (23.0 bits), Expect = 2.1e-07, Sum P(3) = 2.1e-07
Identities = 9/15 (60%), Positives = 13/15 (86%)
Query: 510 QFLSRHALDGKFLFV 524
+F SRH+L+ KFLF+
Sbjct: 250 EFTSRHSLEWKFLFL 264
Score = 50 (22.7 bits), Expect = 2.1e-07, Sum P(3) = 2.1e-07
Identities = 8/38 (21%), Positives = 21/38 (55%)
Query: 525 YQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNTLI 562
Y+F KG ++ LQ+ + + W E+++ ++++
Sbjct: 314 YRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTHSVV 351
>UNIPROTKB|H7C0Z2 [details] [associations]
symbol:NPAS2 "Neuronal PAS domain-containing protein 2"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
GO:GO:0005737 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0005667 GO:GO:0004871 TIGRFAMs:TIGR00229 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC016738 EMBL:AC092168 EMBL:AC106891
HGNC:HGNC:7895 ChiTaRS:NPAS2 ProteinModelPortal:H7C0Z2
Ensembl:ENST00000427413 Uniprot:H7C0Z2
Length = 208
Score = 139 (54.0 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 34/91 (37%), Positives = 55/91 (60%)
Query: 219 RQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSYT 278
R + ++ EK+RRD+ N I ELS+M+P +RK+DK TVL + L+ V + T
Sbjct: 77 RASRNKSEKKRRDQFNVLIKELSSMLP---GNTRKMDKTTVLEKVIGFLQK-HNEVSAQT 132
Query: 279 E-----GHYKPAFLTDQELKHLILQAAEGFL 304
E +KP+FL+++E L+L+A +GF+
Sbjct: 133 EICDIQQDWKPSFLSNEEFTQLMLEALDGFI 163
>UNIPROTKB|F1NGR0 [details] [associations]
symbol:F1NGR0 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0005667 GO:GO:0004871 SMART:SM00086
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AADN02013650 EMBL:AADN02013651 IPI:IPI00577457
Ensembl:ENSGALT00000014751 OMA:GHPRKMD Uniprot:F1NGR0
Length = 675
Score = 135 (52.6 bits), Expect = 2.2e-07, Sum P(3) = 2.2e-07
Identities = 31/91 (34%), Positives = 53/91 (58%)
Query: 219 RQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSYT 278
R + ++ EK+RRD+ N I EL M+ H K+DK T+L+ + L+ + + + T
Sbjct: 12 RASRNKSEKKRRDQFNVLIKELCTML-QGHGHPLKMDKSTILQRTIDFLQKQKEEITAQT 70
Query: 279 EG-----HYKPAFLTDQELKHLILQAAEGFL 304
E +KP+FL+++E L+L+A +GFL
Sbjct: 71 EACEIRQDWKPSFLSNEEFTQLMLEALDGFL 101
Score = 53 (23.7 bits), Expect = 2.2e-07, Sum P(3) = 2.2e-07
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 486 LVAVGRVLADKTRILNKQVNLR-PIQ-FLSRHALDGKFLFV 524
LVA R++ + L + N+ P + F SRH+L+ KFLF+
Sbjct: 230 LVATVRLVTPQ--FLKELCNVEEPCEEFTSRHSLEWKFLFL 268
Score = 50 (22.7 bits), Expect = 2.2e-07, Sum P(3) = 2.2e-07
Identities = 10/44 (22%), Positives = 23/44 (52%)
Query: 519 GKFLFVYQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNTLI 562
GK + Y+F KG ++ LQ+ + + W E+++ + ++
Sbjct: 313 GKSCY-YRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTHLVV 355
>UNIPROTKB|F6QL92 [details] [associations]
symbol:NPAS2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051879 "Hsp90 protein binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045475 "locomotor
rhythm" evidence=IEA] [GO:0042745 "circadian sleep/wake cycle"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 GO:GO:0045475 SMART:SM00086 TIGRFAMs:TIGR00229
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0042745 OMA:KFVGNFR EMBL:DAAA02030201 IPI:IPI00706386
Ensembl:ENSBTAT00000026257 Uniprot:F6QL92
Length = 794
Score = 139 (54.0 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 34/91 (37%), Positives = 55/91 (60%)
Query: 219 RQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSYT 278
R + ++ EK+RRD+ N I ELS+M+P +RK+DK TVL + L+ V + T
Sbjct: 1 RASRNKSEKKRRDQFNVLIKELSSMLP---GNTRKMDKTTVLEKVIGFLQK-HNEVSAQT 56
Query: 279 E-----GHYKPAFLTDQELKHLILQAAEGFL 304
E +KP+FL+++E L+L+A +GF+
Sbjct: 57 EICDIQPDWKPSFLSNEEFTQLMLEALDGFI 87
Score = 51 (23.0 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 9/15 (60%), Positives = 13/15 (86%)
Query: 510 QFLSRHALDGKFLFV 524
+F SRH+L+ KFLF+
Sbjct: 240 EFTSRHSLEWKFLFL 254
Score = 50 (22.7 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 8/38 (21%), Positives = 21/38 (55%)
Query: 525 YQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNTLI 562
Y+F KG ++ LQ+ + + W E+++ ++++
Sbjct: 304 YRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTHSVV 341
>UNIPROTKB|F1STF9 [details] [associations]
symbol:NPAS2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 OMA:KFVGNFR EMBL:CU407191
EMBL:CU972480 Ensembl:ENSSSCT00000008948 Uniprot:F1STF9
Length = 796
Score = 139 (54.0 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 34/91 (37%), Positives = 55/91 (60%)
Query: 219 RQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSYT 278
R + ++ EK+RRD+ N I ELS+M+P +RK+DK TVL + L+ V + T
Sbjct: 11 RASRNKSEKKRRDQFNVLIKELSSMLP---GNTRKMDKTTVLEKVIGFLQK-HNEVSAQT 66
Query: 279 E-----GHYKPAFLTDQELKHLILQAAEGFL 304
E +KP+FL+++E L+L+A +GF+
Sbjct: 67 EICDIQQDWKPSFLSNEEFTQLMLEALDGFI 97
Score = 51 (23.0 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 9/15 (60%), Positives = 13/15 (86%)
Query: 510 QFLSRHALDGKFLFV 524
+F SRH+L+ KFLF+
Sbjct: 250 EFTSRHSLEWKFLFL 264
Score = 50 (22.7 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 8/38 (21%), Positives = 21/38 (55%)
Query: 525 YQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNTLI 562
Y+F KG ++ LQ+ + + W E+++ ++++
Sbjct: 314 YRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTHSVV 351
>UNIPROTKB|F1PPU8 [details] [associations]
symbol:NPAS2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
SMART:SM00086 TIGRFAMs:TIGR00229 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 OMA:KFVGNFR EMBL:AAEX03007435
Ensembl:ENSCAFT00000003487 Uniprot:F1PPU8
Length = 818
Score = 139 (54.0 bits), Expect = 2.7e-07, Sum P(3) = 2.7e-07
Identities = 34/91 (37%), Positives = 55/91 (60%)
Query: 219 RQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSYT 278
R + ++ EK+RRD+ N I ELS+M+P +RK+DK TVL + L+ V + T
Sbjct: 11 RASRNKSEKKRRDQFNVLIKELSSMLP---GNTRKMDKTTVLEKVIGFLQK-HNEVSAQT 66
Query: 279 E-----GHYKPAFLTDQELKHLILQAAEGFL 304
E +KP+FL+++E L+L+A +GF+
Sbjct: 67 EICDIQQDWKPSFLSNEEFTQLMLEALDGFI 97
Score = 51 (23.0 bits), Expect = 2.7e-07, Sum P(3) = 2.7e-07
Identities = 9/15 (60%), Positives = 13/15 (86%)
Query: 510 QFLSRHALDGKFLFV 524
+F SRH+L+ KFLF+
Sbjct: 250 EFTSRHSLEWKFLFL 264
Score = 50 (22.7 bits), Expect = 2.7e-07, Sum P(3) = 2.7e-07
Identities = 8/38 (21%), Positives = 21/38 (55%)
Query: 525 YQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNTLI 562
Y+F KG ++ LQ+ + + W E+++ ++++
Sbjct: 314 YRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTHSVV 351
>UNIPROTKB|Q99743 [details] [associations]
symbol:NPAS2 "Neuronal PAS domain-containing protein 2"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0042745 "circadian sleep/wake
cycle" evidence=IEA] [GO:0045475 "locomotor rhythm" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IPI] [GO:0005667 "transcription
factor complex" evidence=IPI] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0007417 "central nervous system development" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0044255 "cellular lipid
metabolic process" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] [GO:0051879 "Hsp90 protein
binding" evidence=IDA] Reactome:REACT_111217 InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005829
GO:GO:0044281 GO:GO:0003677 GO:GO:0045944 GO:GO:0007417
GO:GO:0003700 GO:GO:0044255 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 MIM:608516 GO:GO:0045475 SMART:SM00086
TIGRFAMs:TIGR00229 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0051879
Pathway_Interaction_DB:circadianpathway Reactome:REACT_24941
eggNOG:NOG300360 HOVERGEN:HBG050997 CTD:4862 KO:K09026 EMBL:U77970
EMBL:AC016738 EMBL:AC092168 EMBL:AC106891 EMBL:BC051351
EMBL:BC072383 EMBL:U51625 IPI:IPI00956556 RefSeq:NP_002509.2
UniGene:Hs.156832 UniGene:Hs.705895 ProteinModelPortal:Q99743
SMR:Q99743 IntAct:Q99743 STRING:Q99743 PhosphoSite:Q99743
DMDM:311033423 PaxDb:Q99743 PRIDE:Q99743 Ensembl:ENST00000335681
GeneID:4862 KEGG:hsa:4862 UCSC:uc002tap.1 GeneCards:GC02P101436
H-InvDB:HIX0200274 HGNC:HGNC:7895 HPA:HPA019674 MIM:603347
neXtProt:NX_Q99743 PharmGKB:PA31696 InParanoid:Q99743
OrthoDB:EOG444KJQ PhylomeDB:Q99743 ChiTaRS:NPAS2 GenomeRNAi:4862
NextBio:18730 ArrayExpress:Q99743 Bgee:Q99743 CleanEx:HS_NPAS2
Genevestigator:Q99743 GermOnline:ENSG00000170485 GO:GO:0042745
Uniprot:Q99743
Length = 824
Score = 139 (54.0 bits), Expect = 2.8e-07, Sum P(3) = 2.8e-07
Identities = 34/91 (37%), Positives = 55/91 (60%)
Query: 219 RQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSYT 278
R + ++ EK+RRD+ N I ELS+M+P +RK+DK TVL + L+ V + T
Sbjct: 11 RASRNKSEKKRRDQFNVLIKELSSMLP---GNTRKMDKTTVLEKVIGFLQK-HNEVSAQT 66
Query: 279 E-----GHYKPAFLTDQELKHLILQAAEGFL 304
E +KP+FL+++E L+L+A +GF+
Sbjct: 67 EICDIQQDWKPSFLSNEEFTQLMLEALDGFI 97
Score = 51 (23.0 bits), Expect = 2.8e-07, Sum P(3) = 2.8e-07
Identities = 9/15 (60%), Positives = 13/15 (86%)
Query: 510 QFLSRHALDGKFLFV 524
+F SRH+L+ KFLF+
Sbjct: 250 EFTSRHSLEWKFLFL 264
Score = 50 (22.7 bits), Expect = 2.8e-07, Sum P(3) = 2.8e-07
Identities = 8/38 (21%), Positives = 21/38 (55%)
Query: 525 YQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNTLI 562
Y+F KG ++ LQ+ + + W E+++ ++++
Sbjct: 314 YRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTHSVV 351
>UNIPROTKB|F1MYL2 [details] [associations]
symbol:ARNT2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR013655
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 SMART:SM00091
InterPro:IPR001610 GO:GO:0005737 GO:GO:0003700 GO:GO:0005667
GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229
GeneTree:ENSGT00650000092935 OMA:VCMDMSG EMBL:DAAA02052316
EMBL:DAAA02052317 EMBL:DAAA02052318 EMBL:DAAA02052319
IPI:IPI00715386 Ensembl:ENSBTAT00000016391 Uniprot:F1MYL2
Length = 513
Score = 82 (33.9 bits), Expect = 3.0e-07, Sum P(3) = 3.0e-07
Identities = 23/87 (26%), Positives = 36/87 (41%)
Query: 439 MGLEESEDRKYSVIQCTGYLKSWAPAKMXXXXXXXXXXXXXXXXXXXLVAVGRVLADKTR 498
+G + + +Y+V+ CTGY+K+W PA LV + +
Sbjct: 63 LGPVKEGEAQYAVVHCTGYIKAWPPA---VKLIPWPNSELVSGPHPCLVTISPFQVTSSP 119
Query: 499 ILNKQVNLR-PIQFLSRHALDGKFLFV 524
+ + P +FLSRH DG FV
Sbjct: 120 VCMDMSGMSVPTEFLSRHNSDGIITFV 146
Score = 81 (33.6 bits), Expect = 3.0e-07, Sum P(3) = 3.0e-07
Identities = 17/45 (37%), Positives = 29/45 (64%)
Query: 517 LDGKFLFV-YQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNT 560
L G+ L V Y+F+ K +V +++ F+NP++ +IEY+I NT
Sbjct: 188 LKGQVLSVMYRFRTKNREWVLIRTSSFTFQNPYSDEIEYIICTNT 232
Score = 76 (31.8 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 10/22 (45%), Positives = 18/22 (81%)
Query: 416 QQSDRKYSVIQCTGYLKSWAPA 437
++ + +Y+V+ CTGY+K+W PA
Sbjct: 67 KEGEAQYAVVHCTGYIKAWPPA 88
Score = 74 (31.1 bits), Expect = 3.0e-07, Sum P(3) = 3.0e-07
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 332 LLPVKTADIPAEVS----RLCPGARRSFFCRMKC 361
+L +KT + E R+C G+RRSF CRM+C
Sbjct: 6 ILDLKTGTVKKEGQQSSMRMCMGSRRSFICRMRC 39
>MGI|MGI:109232 [details] [associations]
symbol:Npas2 "neuronal PAS domain protein 2" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=ISO] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0042745 "circadian sleep/wake
cycle" evidence=IMP] [GO:0045475 "locomotor rhythm" evidence=IMP]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0048511 "rhythmic process"
evidence=IEA] [GO:0051879 "Hsp90 protein binding" evidence=ISO]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
MGI:MGI:109232 GO:GO:0005829 GO:GO:0005654 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
GO:GO:0045475 SMART:SM00086 TIGRFAMs:TIGR00229 Gene3D:4.10.280.10
SUPFAM:SSF47459 Reactome:REACT_109335 Reactome:REACT_24972
eggNOG:NOG300360 HOGENOM:HOG000234382 HOVERGEN:HBG050997 CTD:4862
KO:K09026 OrthoDB:EOG444KJQ GO:GO:0042745 EMBL:U77969
IPI:IPI00625137 RefSeq:NP_032745.2 UniGene:Mm.2380
ProteinModelPortal:P97460 SMR:P97460 STRING:P97460
PhosphoSite:P97460 PRIDE:P97460 GeneID:18143 KEGG:mmu:18143
UCSC:uc007atd.2 InParanoid:P97460 NextBio:293396 CleanEx:MM_NPAS2
Genevestigator:P97460 GermOnline:ENSMUSG00000026077 Uniprot:P97460
Length = 816
Score = 138 (53.6 bits), Expect = 3.4e-07, Sum P(3) = 3.4e-07
Identities = 34/91 (37%), Positives = 55/91 (60%)
Query: 219 RQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSYT 278
R + ++ EK+RRD+ N I ELS+M+P +RK+DK TVL + L+ V + T
Sbjct: 11 RASRNKSEKKRRDQFNVLIKELSSMLP---GNTRKMDKTTVLEKVIGFLQK-HNEVSAQT 66
Query: 279 E-----GHYKPAFLTDQELKHLILQAAEGFL 304
E +KP+FL+++E L+L+A +GF+
Sbjct: 67 EICDIQQDWKPSFLSNEEFTQLMLEALDGFV 97
Score = 51 (23.0 bits), Expect = 3.4e-07, Sum P(3) = 3.4e-07
Identities = 9/15 (60%), Positives = 13/15 (86%)
Query: 510 QFLSRHALDGKFLFV 524
+F SRH+L+ KFLF+
Sbjct: 250 EFTSRHSLEWKFLFL 264
Score = 50 (22.7 bits), Expect = 3.4e-07, Sum P(3) = 3.4e-07
Identities = 8/38 (21%), Positives = 21/38 (55%)
Query: 525 YQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNTLI 562
Y+F KG ++ LQ+ + + W E+++ ++++
Sbjct: 314 YRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTHSVV 351
>UNIPROTKB|F5H027 [details] [associations]
symbol:NPAS2 "Neuronal PAS domain-containing protein 2"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005737
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 SMART:SM00086 TIGRFAMs:TIGR00229 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC016738 EMBL:AC092168 EMBL:AC106891
HGNC:HGNC:7895 ChiTaRS:NPAS2 IPI:IPI00916781
ProteinModelPortal:F5H027 SMR:F5H027 Ensembl:ENST00000542504
UCSC:uc010yvt.1 OMA:KFVGNFR ArrayExpress:F5H027 Bgee:F5H027
Uniprot:F5H027
Length = 889
Score = 139 (54.0 bits), Expect = 3.6e-07, Sum P(3) = 3.6e-07
Identities = 34/91 (37%), Positives = 55/91 (60%)
Query: 219 RQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSYT 278
R + ++ EK+RRD+ N I ELS+M+P +RK+DK TVL + L+ V + T
Sbjct: 76 RASRNKSEKKRRDQFNVLIKELSSMLP---GNTRKMDKTTVLEKVIGFLQK-HNEVSAQT 131
Query: 279 E-----GHYKPAFLTDQELKHLILQAAEGFL 304
E +KP+FL+++E L+L+A +GF+
Sbjct: 132 EICDIQQDWKPSFLSNEEFTQLMLEALDGFI 162
Score = 51 (23.0 bits), Expect = 3.6e-07, Sum P(3) = 3.6e-07
Identities = 9/15 (60%), Positives = 13/15 (86%)
Query: 510 QFLSRHALDGKFLFV 524
+F SRH+L+ KFLF+
Sbjct: 315 EFTSRHSLEWKFLFL 329
Score = 50 (22.7 bits), Expect = 3.6e-07, Sum P(3) = 3.6e-07
Identities = 8/38 (21%), Positives = 21/38 (55%)
Query: 525 YQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNTLI 562
Y+F KG ++ LQ+ + + W E+++ ++++
Sbjct: 379 YRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTHSVV 416
>UNIPROTKB|F1P5G3 [details] [associations]
symbol:NPAS2 "Neuronal PAS domain-containing protein 2"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005737
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 SMART:SM00086 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 IPI:IPI00575691
EMBL:AADN02017717 Ensembl:ENSGALT00000027080 ArrayExpress:F1P5G3
Uniprot:F1P5G3
Length = 815
Score = 139 (54.0 bits), Expect = 4.2e-07, Sum P(3) = 4.2e-07
Identities = 34/91 (37%), Positives = 55/91 (60%)
Query: 219 RQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSYT 278
R + ++ EK+RRD+ N I ELS+M+P +RK+DK TVL + L+ V + T
Sbjct: 11 RASRNKSEKKRRDQFNVLIKELSSMLP---GNTRKMDKTTVLEKVIGFLQK-HNEVSAQT 66
Query: 279 E-----GHYKPAFLTDQELKHLILQAAEGFL 304
E +KP+FL+++E L+L+A +GF+
Sbjct: 67 EISEIQQDWKPSFLSNEEFTQLMLEALDGFI 97
Score = 51 (23.0 bits), Expect = 4.2e-07, Sum P(3) = 4.2e-07
Identities = 9/15 (60%), Positives = 13/15 (86%)
Query: 510 QFLSRHALDGKFLFV 524
+F SRH+L+ KFLF+
Sbjct: 250 EFTSRHSLEWKFLFL 264
Score = 48 (22.0 bits), Expect = 4.2e-07, Sum P(3) = 4.2e-07
Identities = 8/38 (21%), Positives = 20/38 (52%)
Query: 525 YQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNTLI 562
Y+F KG ++ LQ+ + + W E+++ + ++
Sbjct: 314 YRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTHMVV 351
>UNIPROTKB|Q5ZQU2 [details] [associations]
symbol:NPAS2 "Neuronal PAS domain-containing protein 2"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0048511 "rhythmic process" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005737
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0048511
GO:GO:0005667 GO:GO:0004871 SMART:SM00086 Gene3D:4.10.280.10
SUPFAM:SSF47459 eggNOG:NOG300360 HOGENOM:HOG000234382
HOVERGEN:HBG050997 HSSP:Q99814 EMBL:AF396828 EMBL:AF193071
IPI:IPI00575691 RefSeq:NP_001025713.1 UniGene:Gga.235
ProteinModelPortal:Q5ZQU2 STRING:Q5ZQU2 GeneID:395433
KEGG:gga:395433 CTD:4862 KO:K09026 NextBio:20815517 Uniprot:Q5ZQU2
Length = 815
Score = 139 (54.0 bits), Expect = 4.2e-07, Sum P(3) = 4.2e-07
Identities = 34/91 (37%), Positives = 55/91 (60%)
Query: 219 RQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSYT 278
R + ++ EK+RRD+ N I ELS+M+P +RK+DK TVL + L+ V + T
Sbjct: 11 RASRNKSEKKRRDQFNVLIKELSSMLP---GNTRKMDKTTVLEKVIGFLQK-HNEVSAQT 66
Query: 279 E-----GHYKPAFLTDQELKHLILQAAEGFL 304
E +KP+FL+++E L+L+A +GF+
Sbjct: 67 EISEIQQDWKPSFLSNEEFTQLMLEALDGFI 97
Score = 51 (23.0 bits), Expect = 4.2e-07, Sum P(3) = 4.2e-07
Identities = 9/15 (60%), Positives = 13/15 (86%)
Query: 510 QFLSRHALDGKFLFV 524
+F SRH+L+ KFLF+
Sbjct: 250 EFTSRHSLEWKFLFL 264
Score = 48 (22.0 bits), Expect = 4.2e-07, Sum P(3) = 4.2e-07
Identities = 8/38 (21%), Positives = 20/38 (52%)
Query: 525 YQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNTLI 562
Y+F KG ++ LQ+ + + W E+++ + ++
Sbjct: 314 YRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTHMVV 351
>UNIPROTKB|F1RVI1 [details] [associations]
symbol:CLOCK "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0032922 "circadian regulation of gene expression"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0001190 "RNA
polymerase II transcription factor binding transcription factor
activity involved in positive regulation of transcription"
evidence=IEA] [GO:0000982 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
SMART:SM00086 GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:CU861936 Ensembl:ENSSSCT00000009755
OMA:ANARRAW Uniprot:F1RVI1
Length = 410
Score = 134 (52.2 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 40/123 (32%), Positives = 62/123 (50%)
Query: 192 LFSSDLSPRERLIDVKSKQVIVGL-------PVSRQNHSEIEKRRRDKMNTYITELSAMV 244
LF+ S L+D + GL R + ++ EK+RRD+ N I EL +M+
Sbjct: 2 LFTVSCSKMSSLVDRDDGSIFDGLVEEDDKDKAKRVSRNKSEKKRRDQFNVLIKELGSML 61
Query: 245 PMCHAMSRKLDKLTVLRMAVQHL---KTIRGAVH-SYTEGHYKPAFLTDQELKHLILQAA 300
P +RK+DK TVL+ ++ L K I S +KP FL+++E L+L+A
Sbjct: 62 P---GNARKMDKSTVLQKSIDFLRKHKEITAQSDASEIRQDWKPTFLSNEEFTQLMLEAL 118
Query: 301 EGF 303
+GF
Sbjct: 119 DGF 121
Score = 55 (24.4 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 11/44 (25%), Positives = 24/44 (54%)
Query: 519 GKFLFVYQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNTLI 562
GK + Y+F KG ++ LQ+ + + W E+++ +T++
Sbjct: 334 GKSCY-YRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVV 376
Score = 51 (23.0 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 9/15 (60%), Positives = 13/15 (86%)
Query: 510 QFLSRHALDGKFLFV 524
+F SRH+L+ KFLF+
Sbjct: 275 EFTSRHSLEWKFLFL 289
>UNIPROTKB|E1BZV0 [details] [associations]
symbol:NPAS2 "Neuronal PAS domain-containing protein 2"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0042745 "circadian
sleep/wake cycle" evidence=IEA] [GO:0045475 "locomotor rhythm"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0051879 "Hsp90
protein binding" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0003677
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 SMART:SM00086 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 OMA:KFVGNFR EMBL:AADN02017717
IPI:IPI00823351 Ensembl:ENSGALT00000036585 ArrayExpress:E1BZV0
Uniprot:E1BZV0
Length = 817
Score = 139 (54.0 bits), Expect = 4.2e-07, Sum P(3) = 4.2e-07
Identities = 34/91 (37%), Positives = 55/91 (60%)
Query: 219 RQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKTIRGAVHSYT 278
R + ++ EK+RRD+ N I ELS+M+P +RK+DK TVL + L+ V + T
Sbjct: 13 RASRNKSEKKRRDQFNVLIKELSSMLP---GNTRKMDKTTVLEKVIGFLQK-HNEVSAQT 68
Query: 279 E-----GHYKPAFLTDQELKHLILQAAEGFL 304
E +KP+FL+++E L+L+A +GF+
Sbjct: 69 EISEIQQDWKPSFLSNEEFTQLMLEALDGFI 99
Score = 51 (23.0 bits), Expect = 4.2e-07, Sum P(3) = 4.2e-07
Identities = 9/15 (60%), Positives = 13/15 (86%)
Query: 510 QFLSRHALDGKFLFV 524
+F SRH+L+ KFLF+
Sbjct: 252 EFTSRHSLEWKFLFL 266
Score = 48 (22.0 bits), Expect = 4.2e-07, Sum P(3) = 4.2e-07
Identities = 8/38 (21%), Positives = 20/38 (52%)
Query: 525 YQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNTLI 562
Y+F KG ++ LQ+ + + W E+++ + ++
Sbjct: 316 YRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTHMVV 353
>ZFIN|ZDB-GENE-030408-2 [details] [associations]
symbol:clock3 "clock homolog 3 (mouse)" species:7955
"Danio rerio" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009648
"photoperiodism" evidence=IEP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009416 "response to light stimulus"
evidence=IGI] [GO:0007623 "circadian rhythm" evidence=IGI]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
Pfam:PF00010 Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
ZFIN:ZDB-GENE-030408-2 GO:GO:0005737 GO:GO:0003677 GO:GO:0007623
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
SMART:SM00086 GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0009648 eggNOG:NOG300360 HOGENOM:HOG000234382
HOVERGEN:HBG050997 OrthoDB:EOG476JZV EMBL:BX901913 EMBL:BX548248
EMBL:CR926462 EMBL:BC162682 IPI:IPI00483024 UniGene:Dr.86747
STRING:B3DH92 Ensembl:ENSDART00000103119 Ensembl:ENSDART00000133959
Uniprot:B3DH92
Length = 820
Score = 137 (53.3 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 32/89 (35%), Positives = 53/89 (59%)
Query: 219 RQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHL-KTIRGAVHSY 277
R + ++ EK+RRD+ N I EL M+P +RK+DK T+L+ ++ +L K A S
Sbjct: 26 RVSRNKSEKKRRDQFNVLIKELGTMLP---GNTRKMDKSTILQKSIDYLRKNKENAAQSE 82
Query: 278 TEG---HYKPAFLTDQELKHLILQAAEGF 303
+ +KP FL+++E L+L+A +GF
Sbjct: 83 SSDIKQDWKPPFLSNEEFSQLMLEALDGF 111
Score = 55 (24.4 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 11/44 (25%), Positives = 24/44 (54%)
Query: 519 GKFLFVYQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNTLI 562
GK + Y+F KG ++ LQ+ + + W E+++ +T++
Sbjct: 323 GKSCY-YRFLTKGQQWIWLQTNYYITYHQWNSRPEFIVCTHTVV 365
Score = 45 (20.9 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 8/15 (53%), Positives = 12/15 (80%)
Query: 510 QFLSRHALDGKFLFV 524
+F SRH+L+ KFL +
Sbjct: 264 EFTSRHSLEWKFLLL 278
>MGI|MGI:99698 [details] [associations]
symbol:Clock "circadian locomotor output cycles kaput"
species:10090 "Mus musculus" [GO:0000077 "DNA damage checkpoint"
evidence=ISO] [GO:0000978 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding" evidence=ISO] [GO:0000982
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding transcription factor activity" evidence=IDA]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IC]
[GO:0001190 "RNA polymerase II transcription factor binding
transcription factor activity involved in positive regulation of
transcription" evidence=IDA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISA;IDA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005667 "transcription factor complex" evidence=ISO;IDA]
[GO:0005694 "chromosome" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISA;IDA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IDA;IMP]
[GO:0008134 "transcription factor binding" evidence=ISA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016746
"transferase activity, transferring acyl groups" evidence=IEA]
[GO:0032922 "circadian regulation of gene expression" evidence=IMP]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IGI;IC;ISO;IDA] [GO:0046983
"protein dimerization activity" evidence=IEA] [GO:0048511 "rhythmic
process" evidence=IEA] [GO:0070888 "E-box binding" evidence=ISO]
[GO:0071479 "cellular response to ionizing radiation" evidence=ISO]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
MGI:MGI:99698 GO:GO:0005829 GO:GO:0000077 GO:GO:0005694
GO:GO:0009649 GO:GO:0016573 GO:GO:0005667 GO:GO:0000978
GO:GO:0001077 GO:GO:0004871 GO:GO:0032922 SMART:SM00086
GO:GO:0001190 GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0008134 GO:GO:0071479 GO:GO:0070888
Reactome:REACT_109335 Reactome:REACT_24972 PDB:4F3L PDBsum:4F3L
GO:GO:0004402 CTD:9575 eggNOG:NOG300360 HOGENOM:HOG000234382
HOVERGEN:HBG050997 KO:K02223 OMA:AHEKMAQ OrthoDB:EOG476JZV
EMBL:AF000998 EMBL:AF146793 IPI:IPI00230536 IPI:IPI00420596
RefSeq:NP_031741.1 UniGene:Mm.3552 UniGene:Mm.392894
ProteinModelPortal:O08785 SMR:O08785 DIP:DIP-30958N IntAct:O08785
MINT:MINT-4654078 STRING:O08785 PhosphoSite:O08785 PRIDE:O08785
DNASU:12753 Ensembl:ENSMUST00000075159 GeneID:12753 KEGG:mmu:12753
InParanoid:O08785 NextBio:282092 Bgee:O08785 CleanEx:MM_CLOCK
Genevestigator:O08785 GermOnline:ENSMUSG00000029238 Uniprot:O08785
Length = 855
Score = 137 (53.3 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 37/123 (30%), Positives = 64/123 (52%)
Query: 192 LFSSDLSPRERLIDVKSKQVIVGL-------PVSRQNHSEIEKRRRDKMNTYITELSAMV 244
+F+ S ++D + GL R + ++ EK+RRD+ N I EL +M+
Sbjct: 2 VFTVSCSKMSSIVDRDDSSIFDGLVEEDDKDKAKRVSRNKSEKKRRDQFNVLIKELGSML 61
Query: 245 PMCHAMSRKLDKLTVLRMAV----QHLKTIRGAVHSYTEGHYKPAFLTDQELKHLILQAA 300
P +RK+DK TVL+ ++ +H +T + S +KP FL+++E L+L+A
Sbjct: 62 P---GNARKMDKSTVLQKSIDFLRKHKETTAQSDASEIRQDWKPTFLSNEEFTQLMLEAL 118
Query: 301 EGF 303
+GF
Sbjct: 119 DGF 121
Score = 55 (24.4 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 11/44 (25%), Positives = 24/44 (54%)
Query: 519 GKFLFVYQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNTLI 562
GK + Y+F KG ++ LQ+ + + W E+++ +T++
Sbjct: 334 GKSCY-YRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVV 376
Score = 51 (23.0 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 9/15 (60%), Positives = 13/15 (86%)
Query: 510 QFLSRHALDGKFLFV 524
+F SRH+L+ KFLF+
Sbjct: 275 EFTSRHSLEWKFLFL 289
>ZFIN|ZDB-GENE-030408-3 [details] [associations]
symbol:npas2 "neuronal PAS domain protein 2"
species:7955 "Danio rerio" [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA;IPI] [GO:0003690
"double-stranded DNA binding" evidence=IDA] [GO:0009648
"photoperiodism" evidence=IEP] [GO:0007623 "circadian rhythm"
evidence=IGI] [GO:0009416 "response to light stimulus"
evidence=IGI] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610
ZFIN:ZDB-GENE-030408-3 GO:GO:0005737 GO:GO:0003677 GO:GO:0007623
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
SMART:SM00086 GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0009648 eggNOG:NOG300360 HOGENOM:HOG000234382
HOVERGEN:HBG050997 KO:K02223 HSSP:Q99814 CTD:4862 OrthoDB:EOG444KJQ
OMA:GHPRKMD EMBL:CU464080 EMBL:BC163256 EMBL:AB087255
IPI:IPI00505783 RefSeq:NP_840084.1 UniGene:Dr.24959 STRING:Q8JIG3
Ensembl:ENSDART00000014806 GeneID:352934 KEGG:dre:352934
InParanoid:Q8JIG3 NextBio:20812676 Uniprot:Q8JIG3
Length = 845
Score = 128 (50.1 bits), Expect = 2.3e-06, Sum P(3) = 2.3e-06
Identities = 32/90 (35%), Positives = 50/90 (55%)
Query: 219 RQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHL---KTIRGAVH 275
R + ++ EK+RRD+ N I EL M+ RK+DK T+L+ + L K I
Sbjct: 44 RASRNKSEKKRRDQFNVLIKELCTML-QGQGHPRKMDKSTILQRTIDFLQKQKEITAQTE 102
Query: 276 SY-TEGHYKPAFLTDQELKHLILQAAEGFL 304
S +KP+FL+++E L+L+A +GFL
Sbjct: 103 SCEVRQDWKPSFLSNEEFTQLMLEALDGFL 132
Score = 52 (23.4 bits), Expect = 2.3e-06, Sum P(3) = 2.3e-06
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 486 LVAVGRVLADKTRILNKQVNLRPI--QFLSRHALDGKFLFV 524
LVA R+ + L N+ + +F SRH+L+ KFLF+
Sbjct: 262 LVATVRLATPQ--FLKDLCNVEDVCDEFTSRHSLEWKFLFL 300
Score = 52 (23.4 bits), Expect = 2.3e-06, Sum P(3) = 2.3e-06
Identities = 10/44 (22%), Positives = 24/44 (54%)
Query: 519 GKFLFVYQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNTLI 562
GK + Y+F KG ++ LQ+ + + W E+++ ++++
Sbjct: 345 GKSCY-YRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTHSVV 387
>FB|FBgn0023076 [details] [associations]
symbol:Clk "Clock" species:7227 "Drosophila melanogaster"
[GO:0003677 "DNA binding" evidence=IDA;NAS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IGI;NAS;TAS]
[GO:0007623 "circadian rhythm" evidence=NAS;IMP;TAS] [GO:0046982
"protein heterodimerization activity" evidence=NAS;IPI] [GO:0000977
"RNA polymerase II regulatory region sequence-specific DNA binding"
evidence=IPI] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=NAS] [GO:0048148
"behavioral response to cocaine" evidence=NAS;TAS] [GO:0045475
"locomotor rhythm" evidence=IMP;NAS;TAS] [GO:0008062 "eclosion
rhythm" evidence=NAS;TAS] [GO:0045187 "regulation of circadian
sleep/wake cycle, sleep" evidence=IMP] [GO:0007622 "rhythmic
behavior" evidence=TAS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter"
evidence=IDA;NAS;TAS] [GO:0007165 "signal transduction"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=NAS] [GO:0032922
"circadian regulation of gene expression" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
Pfam:PF00010 Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005634 GO:GO:0005737 EMBL:AE014296 GO:GO:0003677
GO:GO:0045187 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351
GO:GO:0005667 GO:GO:0000122 GO:GO:0004871 GO:GO:0046982
GO:GO:0048148 GO:GO:0045475 GO:GO:0032922 SMART:SM00086
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG300360 KO:K02223 EMBL:AF065133 EMBL:AF069997
EMBL:AF067207 PIR:T13062 PIR:T13068 PIR:T13071
RefSeq:NP_001014574.1 RefSeq:NP_001014576.1 RefSeq:NP_523964.2
UniGene:Dm.7596 ProteinModelPortal:O61735 SMR:O61735 IntAct:O61735
MINT:MINT-7025605 STRING:O61735 PaxDb:O61735
EnsemblMetazoa:FBtr0100132 GeneID:38872 KEGG:dme:Dmel_CG7391
UCSC:CG7391-RA CTD:363233 FlyBase:FBgn0023076 InParanoid:O61735
OMA:IVACHEE OrthoDB:EOG4HHMHD PhylomeDB:O61735 GenomeRNAi:38872
NextBio:810786 Bgee:O61735 GermOnline:CG7391 GO:GO:0008062
Uniprot:O61735
Length = 1027
Score = 145 (56.1 bits), Expect = 2.7e-06, Sum P(3) = 2.7e-06
Identities = 35/97 (36%), Positives = 58/97 (59%)
Query: 219 RQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLK-----TIRGA 273
R++ + EK+RRD+ N+ + +LSA++ SRK+DK TVL+ + LK T R
Sbjct: 17 RKSRNLSEKKRRDQFNSLVNDLSALIS---TSSRKMDKSTVLKSTIAFLKNHNEATDRSK 73
Query: 274 VHSYTEGHYKPAFLTDQELKHLILQAAEGFLQNHSEI 310
V + +KPAFL++ E HL+L++ +GF+ S +
Sbjct: 74 VFEIQQD-WKPAFLSNDEYTHLMLESLDGFMMVFSSM 109
Score = 51 (23.0 bits), Expect = 2.7e-06, Sum P(3) = 2.7e-06
Identities = 12/41 (29%), Positives = 23/41 (56%)
Query: 486 LVAVGRVLADKTRILNKQVNLRPI--QFLSRHALDGKFLFV 524
LV VG +++ + + P +F S+H+++ KFLF+
Sbjct: 240 LVFVGTGRVQNPQLIREMSIIDPTSNEFTSKHSMEWKFLFL 280
Score = 45 (20.9 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 10/49 (20%), Positives = 26/49 (53%)
Query: 514 RHALDGKFLFVYQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNTLI 562
R +GK + Y+F KG ++ LQ+++ + + +Y++ + ++
Sbjct: 320 RQTGEGKSCY-YRFLTKGQQWIWLQTDYYVSYHQFNSKPDYVVCTHKVV 367
Score = 37 (18.1 bits), Expect = 2.7e-06, Sum P(3) = 2.7e-06
Identities = 5/21 (23%), Positives = 13/21 (61%)
Query: 440 GLEESEDRKYSVIQCTGYLKS 460
G+E+ + Y +++ GY ++
Sbjct: 181 GMEKVDANAYELVKFVGYFRN 201
>UNIPROTKB|D4A4R8 [details] [associations]
symbol:Clock "Circadian locomoter output cycles protein
kaput" species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 RGD:620271
GO:GO:0005737 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0005667 GO:GO:0004871 SMART:SM00086
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
IPI:IPI00201128 UniGene:Rn.205839 EMBL:CH473981
Ensembl:ENSRNOT00000002981 Uniprot:D4A4R8
Length = 833
Score = 134 (52.2 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 39/123 (31%), Positives = 62/123 (50%)
Query: 192 LFSSDLSPRERLIDVKSKQVIVGL-------PVSRQNHSEIEKRRRDKMNTYITELSAMV 244
LF+ S ++D + GL R + ++ EK+RRD+ N I EL +M+
Sbjct: 2 LFTVSCSKMSSIVDRDDSSIFDGLVEEDDKDKAKRVSRNKSEKKRRDQFNVLIKELGSML 61
Query: 245 PMCHAMSRKLDKLTVLRMAVQHL---KTIRGAVH-SYTEGHYKPAFLTDQELKHLILQAA 300
P +RK+DK TVL+ ++ L K I S +KP FL+++E L+L+A
Sbjct: 62 P---GNARKMDKSTVLQKSIDFLRKHKEITAQSDASEIRQDWKPTFLSNEEFTQLMLEAL 118
Query: 301 EGF 303
+GF
Sbjct: 119 DGF 121
Score = 55 (24.4 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 11/44 (25%), Positives = 24/44 (54%)
Query: 519 GKFLFVYQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNTLI 562
GK + Y+F KG ++ LQ+ + + W E+++ +T++
Sbjct: 334 GKSCY-YRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVV 376
Score = 51 (23.0 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 9/15 (60%), Positives = 13/15 (86%)
Query: 510 QFLSRHALDGKFLFV 524
+F SRH+L+ KFLF+
Sbjct: 275 EFTSRHSLEWKFLFL 289
>UNIPROTKB|F1MLT7 [details] [associations]
symbol:CLOCK "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071479 "cellular response to ionizing radiation"
evidence=IEA] [GO:0070888 "E-box binding" evidence=IEA] [GO:0032922
"circadian regulation of gene expression" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0001190 "RNA polymerase II transcription factor binding
transcription factor activity involved in positive regulation of
transcription" evidence=IEA] [GO:0000982 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000978 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding" evidence=IEA] [GO:0000077 "DNA damage checkpoint"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005737 GO:GO:0000077 GO:GO:0005694
GO:GO:0005667 GO:GO:0000978 GO:GO:0004871 GO:GO:0000982
GO:GO:0032922 SMART:SM00086 GO:GO:0001190
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0071479 GO:GO:0070888 OMA:AHEKMAQ EMBL:DAAA02017731
EMBL:DAAA02017732 IPI:IPI00999446 Ensembl:ENSBTAT00000061480
Uniprot:F1MLT7
Length = 846
Score = 134 (52.2 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 40/123 (32%), Positives = 62/123 (50%)
Query: 192 LFSSDLSPRERLIDVKSKQVIVGL-------PVSRQNHSEIEKRRRDKMNTYITELSAMV 244
LF+ S L+D + GL R + ++ EK+RRD+ N I EL +M+
Sbjct: 3 LFTVSCSKMSSLVDRDDGSIFDGLVEEDDKDKAKRVSRNKSEKKRRDQFNVLIKELGSML 62
Query: 245 PMCHAMSRKLDKLTVLRMAVQHL---KTIRGAVH-SYTEGHYKPAFLTDQELKHLILQAA 300
P +RK+DK TVL+ ++ L K I S +KP FL+++E L+L+A
Sbjct: 63 P---GNARKMDKSTVLQKSIDFLRKHKEITAQSDASEIRQDWKPTFLSNEEFTQLMLEAL 119
Query: 301 EGF 303
+GF
Sbjct: 120 DGF 122
Score = 55 (24.4 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 11/44 (25%), Positives = 24/44 (54%)
Query: 519 GKFLFVYQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNTLI 562
GK + Y+F KG ++ LQ+ + + W E+++ +T++
Sbjct: 335 GKSCY-YRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVV 377
Score = 51 (23.0 bits), Expect = 8.6e-06, Sum P(2) = 8.6e-06
Identities = 9/15 (60%), Positives = 13/15 (86%)
Query: 510 QFLSRHALDGKFLFV 524
+F SRH+L+ KFLF+
Sbjct: 276 EFTSRHSLEWKFLFL 290
>UNIPROTKB|O15516 [details] [associations]
symbol:CLOCK "Circadian locomoter output cycles protein
kaput" species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0005694 "chromosome" evidence=IDA] [GO:0000077
"DNA damage checkpoint" evidence=IMP] [GO:0071479 "cellular
response to ionizing radiation" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0032922 "circadian regulation of gene expression" evidence=ISS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0007623 "circadian rhythm"
evidence=TAS] [GO:0009648 "photoperiodism" evidence=TAS]
[GO:0005667 "transcription factor complex" evidence=IPI]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IGI] [GO:0005829 "cytosol"
evidence=TAS] [GO:0000982 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0000978 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding" evidence=IDA] [GO:0070888
"E-box binding" evidence=IDA] [GO:0001190 "RNA polymerase II
transcription factor binding transcription factor activity involved
in positive regulation of transcription" evidence=ISS] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005829 GO:GO:0000077
GO:GO:0005694 GO:GO:0007165 GO:GO:0009649 GO:GO:0016573
GO:GO:0005667 GO:GO:0000978 GO:GO:0004871 GO:GO:0000982
GO:GO:0032922 SMART:SM00086 GO:GO:0001190 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0071479 GO:GO:0070888
Pathway_Interaction_DB:circadianpathway Reactome:REACT_24941
PDB:4H10 PDBsum:4H10 GO:GO:0004402 GO:GO:0009648 CTD:9575
eggNOG:NOG300360 HOGENOM:HOG000234382 HOVERGEN:HBG050997 KO:K02223
EMBL:AF011568 EMBL:AH008440 EMBL:EF015897 EMBL:AB002332
EMBL:AK291708 EMBL:BC126157 EMBL:BC126159 EMBL:AB005535
IPI:IPI00007284 RefSeq:NP_001254772.1 RefSeq:NP_004889.1
UniGene:Hs.436975 UniGene:Hs.689578 ProteinModelPortal:O15516
SMR:O15516 IntAct:O15516 STRING:O15516 PhosphoSite:O15516
PRIDE:O15516 DNASU:9575 Ensembl:ENST00000309964
Ensembl:ENST00000381322 Ensembl:ENST00000513440 GeneID:9575
KEGG:hsa:9575 UCSC:uc003haz.1 GeneCards:GC04M056294 HGNC:HGNC:2082
HPA:HPA001867 HPA:HPA027565 MIM:601851 neXtProt:NX_O15516
PharmGKB:PA26609 InParanoid:O15516 OMA:AHEKMAQ OrthoDB:EOG476JZV
PhylomeDB:O15516 GenomeRNAi:9575 NextBio:35907 ArrayExpress:O15516
Bgee:O15516 CleanEx:HS_CLOCK Genevestigator:O15516
GermOnline:ENSG00000134852 Uniprot:O15516
Length = 846
Score = 134 (52.2 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 39/123 (31%), Positives = 62/123 (50%)
Query: 192 LFSSDLSPRERLIDVKSKQVIVGL-------PVSRQNHSEIEKRRRDKMNTYITELSAMV 244
LF+ S ++D + GL R + ++ EK+RRD+ N I EL +M+
Sbjct: 2 LFTVSCSKMSSIVDRDDSSIFDGLVEEDDKDKAKRVSRNKSEKKRRDQFNVLIKELGSML 61
Query: 245 PMCHAMSRKLDKLTVLRMAVQHL---KTIRGAVH-SYTEGHYKPAFLTDQELKHLILQAA 300
P +RK+DK TVL+ ++ L K I S +KP FL+++E L+L+A
Sbjct: 62 P---GNARKMDKSTVLQKSIDFLRKHKEITAQSDASEIRQDWKPTFLSNEEFTQLMLEAL 118
Query: 301 EGF 303
+GF
Sbjct: 119 DGF 121
Score = 55 (24.4 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 11/44 (25%), Positives = 24/44 (54%)
Query: 519 GKFLFVYQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNTLI 562
GK + Y+F KG ++ LQ+ + + W E+++ +T++
Sbjct: 334 GKSCY-YRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVV 376
Score = 51 (23.0 bits), Expect = 8.6e-06, Sum P(2) = 8.6e-06
Identities = 9/15 (60%), Positives = 13/15 (86%)
Query: 510 QFLSRHALDGKFLFV 524
+F SRH+L+ KFLF+
Sbjct: 275 EFTSRHSLEWKFLFL 289
>UNIPROTKB|Q5RAK8 [details] [associations]
symbol:CLOCK "Circadian locomoter output cycles protein
kaput" species:9601 "Pongo abelii" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0005667 "transcription factor complex" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0032922 "circadian regulation of gene expression"
evidence=ISS] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888 SMART:SM00091
SMART:SM00353 InterPro:IPR001610 GO:GO:0005737 GO:GO:0005694
GO:GO:0003677 GO:GO:0016573 GO:GO:0003700 GO:GO:0006351
GO:GO:0006974 GO:GO:0005667 GO:GO:0004871 GO:GO:0032922
SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
GO:GO:0004402 CTD:9575 HOVERGEN:HBG050997 KO:K02223 EMBL:CR859007
RefSeq:NP_001125706.1 UniGene:Pab.7567 ProteinModelPortal:Q5RAK8
GeneID:100172630 KEGG:pon:100172630 InParanoid:Q5RAK8
Uniprot:Q5RAK8
Length = 846
Score = 134 (52.2 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 39/123 (31%), Positives = 62/123 (50%)
Query: 192 LFSSDLSPRERLIDVKSKQVIVGL-------PVSRQNHSEIEKRRRDKMNTYITELSAMV 244
LF+ S ++D + GL R + ++ EK+RRD+ N I EL +M+
Sbjct: 2 LFTVSCSKMSSIVDRDDSSIFDGLVEEDDKDKAKRVSRNKSEKKRRDQFNVLIKELGSML 61
Query: 245 PMCHAMSRKLDKLTVLRMAVQHL---KTIRGAVH-SYTEGHYKPAFLTDQELKHLILQAA 300
P +RK+DK TVL+ ++ L K I S +KP FL+++E L+L+A
Sbjct: 62 P---GNARKMDKSTVLQKSIDFLRKHKEITAQSDASEIRQDWKPTFLSNEEFTQLMLEAL 118
Query: 301 EGF 303
+GF
Sbjct: 119 DGF 121
Score = 55 (24.4 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 11/44 (25%), Positives = 24/44 (54%)
Query: 519 GKFLFVYQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNTLI 562
GK + Y+F KG ++ LQ+ + + W E+++ +T++
Sbjct: 334 GKSCY-YRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVV 376
Score = 51 (23.0 bits), Expect = 8.6e-06, Sum P(2) = 8.6e-06
Identities = 9/15 (60%), Positives = 13/15 (86%)
Query: 510 QFLSRHALDGKFLFV 524
+F SRH+L+ KFLF+
Sbjct: 275 EFASRHSLEWKFLFL 289
>UNIPROTKB|F1PSD8 [details] [associations]
symbol:CLOCK "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071479 "cellular response to ionizing
radiation" evidence=IEA] [GO:0070888 "E-box binding" evidence=IEA]
[GO:0032922 "circadian regulation of gene expression" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0001190 "RNA polymerase II transcription factor
binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0000982 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0000978
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding" evidence=IEA] [GO:0000077 "DNA damage checkpoint"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0004871 "signal transducer activity"
evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013655 InterPro:IPR013767
Pfam:PF00010 Pfam:PF00989 Pfam:PF08447 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
InterPro:IPR001610 GO:GO:0005737 GO:GO:0000077 GO:GO:0005694
GO:GO:0005667 GO:GO:0000978 GO:GO:0004871 GO:GO:0000982
GO:GO:0032922 SMART:SM00086 GO:GO:0001190
GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0071479 GO:GO:0070888 OMA:AHEKMAQ EMBL:AAEX03009082
Ensembl:ENSCAFT00000003400 Uniprot:F1PSD8
Length = 848
Score = 134 (52.2 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 34/90 (37%), Positives = 53/90 (58%)
Query: 218 SRQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHL---KTIRGAV 274
SR + ++ EK+RRD+ N I EL +M+P +RK+DK TVL+ ++ L K I
Sbjct: 36 SRVSRNKSEKKRRDQFNVLIKELGSMLP---GNARKMDKSTVLQKSIDFLRKHKEITAQS 92
Query: 275 H-SYTEGHYKPAFLTDQELKHLILQAAEGF 303
S +KP FL+++E L+L+A +GF
Sbjct: 93 DASEIRQDWKPTFLSNEEFTQLMLEALDGF 122
Score = 55 (24.4 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 11/44 (25%), Positives = 24/44 (54%)
Query: 519 GKFLFVYQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNTLI 562
GK + Y+F KG ++ LQ+ + + W E+++ +T++
Sbjct: 335 GKSCY-YRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVV 377
Score = 51 (23.0 bits), Expect = 8.6e-06, Sum P(2) = 8.6e-06
Identities = 9/15 (60%), Positives = 13/15 (86%)
Query: 510 QFLSRHALDGKFLFV 524
+F SRH+L+ KFLF+
Sbjct: 276 EFTSRHSLEWKFLFL 290
>UNIPROTKB|F1M012 [details] [associations]
symbol:Clock "Circadian locomoter output cycles protein
kaput" species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 RGD:620271
GO:GO:0005737 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
GO:GO:0005667 GO:GO:0004871 SMART:SM00086 Gene3D:4.10.280.10
SUPFAM:SSF47459 IPI:IPI00557436 Ensembl:ENSRNOT00000051891
ArrayExpress:F1M012 Uniprot:F1M012
Length = 857
Score = 134 (52.2 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 39/123 (31%), Positives = 62/123 (50%)
Query: 192 LFSSDLSPRERLIDVKSKQVIVGL-------PVSRQNHSEIEKRRRDKMNTYITELSAMV 244
LF+ S ++D + GL R + ++ EK+RRD+ N I EL +M+
Sbjct: 4 LFTVSCSKMSSIVDRDDSSIFDGLVEEDDKDKAKRVSRNKSEKKRRDQFNVLIKELGSML 63
Query: 245 PMCHAMSRKLDKLTVLRMAVQHL---KTIRGAVH-SYTEGHYKPAFLTDQELKHLILQAA 300
P +RK+DK TVL+ ++ L K I S +KP FL+++E L+L+A
Sbjct: 64 P---GNARKMDKSTVLQKSIDFLRKHKEITAQSDASEIRQDWKPTFLSNEEFTQLMLEAL 120
Query: 301 EGF 303
+GF
Sbjct: 121 DGF 123
Score = 55 (24.4 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 11/44 (25%), Positives = 24/44 (54%)
Query: 519 GKFLFVYQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNTLI 562
GK + Y+F KG ++ LQ+ + + W E+++ +T++
Sbjct: 336 GKSCY-YRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVV 378
Score = 51 (23.0 bits), Expect = 8.8e-06, Sum P(2) = 8.8e-06
Identities = 9/15 (60%), Positives = 13/15 (86%)
Query: 510 QFLSRHALDGKFLFV 524
+F SRH+L+ KFLF+
Sbjct: 277 EFTSRHSLEWKFLFL 291
>RGD|620271 [details] [associations]
symbol:Clock "clock circadian regulator" species:10116 "Rattus
norvegicus" [GO:0000077 "DNA damage checkpoint" evidence=IEA;ISO]
[GO:0000978 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding" evidence=IEA;ISO] [GO:0000982 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISO]
[GO:0001190 "RNA polymerase II transcription factor binding
transcription factor activity involved in positive regulation of
transcription" evidence=IEA;ISO] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO;ISS] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0004871
"signal transducer activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005667 "transcription factor complex"
evidence=IEA;ISO;ISS] [GO:0005694 "chromosome" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISO;ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0007623 "circadian rhythm" evidence=ISO;NAS] [GO:0009649
"entrainment of circadian clock" evidence=IEP] [GO:0032922
"circadian regulation of gene expression" evidence=IEA;ISO;ISS]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0070888 "E-box binding"
evidence=IEA;ISO] [GO:0071479 "cellular response to ionizing
radiation" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
RGD:620271 GO:GO:0005737 GO:GO:0000077 GO:GO:0005694 GO:GO:0009649
GO:GO:0016573 GO:GO:0003700 GO:GO:0005667 GO:GO:0000978
GO:GO:0004871 GO:GO:0000982 GO:GO:0032922 SMART:SM00086
GO:GO:0001190 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
GO:GO:0071479 GO:GO:0070888 GO:GO:0004402 CTD:9575 eggNOG:NOG300360
HOGENOM:HOG000234382 HOVERGEN:HBG050997 KO:K02223 EMBL:AB019258
EMBL:AB019259 IPI:IPI00201128 IPI:IPI00205319 RefSeq:NP_068628.1
UniGene:Rn.205839 ProteinModelPortal:Q9WVS9 STRING:Q9WVS9
PhosphoSite:Q9WVS9 GeneID:60447 KEGG:rno:60447 UCSC:RGD:620271
InParanoid:Q9WVS9 NextBio:612192 ArrayExpress:Q9WVS9
Genevestigator:Q9WVS9 GermOnline:ENSRNOG00000002175 Uniprot:Q9WVS9
Length = 862
Score = 134 (52.2 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 39/123 (31%), Positives = 62/123 (50%)
Query: 192 LFSSDLSPRERLIDVKSKQVIVGL-------PVSRQNHSEIEKRRRDKMNTYITELSAMV 244
LF+ S ++D + GL R + ++ EK+RRD+ N I EL +M+
Sbjct: 2 LFTVSCSKMSSIVDRDDSSIFDGLVEEDDKDKAKRVSRNKSEKKRRDQFNVLIKELGSML 61
Query: 245 PMCHAMSRKLDKLTVLRMAVQHL---KTIRGAVH-SYTEGHYKPAFLTDQELKHLILQAA 300
P +RK+DK TVL+ ++ L K I S +KP FL+++E L+L+A
Sbjct: 62 P---GNARKMDKSTVLQKSIDFLRKHKEITAQSDASEIRQDWKPTFLSNEEFTQLMLEAL 118
Query: 301 EGF 303
+GF
Sbjct: 119 DGF 121
Score = 55 (24.4 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 11/44 (25%), Positives = 24/44 (54%)
Query: 519 GKFLFVYQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNTLI 562
GK + Y+F KG ++ LQ+ + + W E+++ +T++
Sbjct: 334 GKSCY-YRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVV 376
Score = 51 (23.0 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 9/15 (60%), Positives = 13/15 (86%)
Query: 510 QFLSRHALDGKFLFV 524
+F SRH+L+ KFLF+
Sbjct: 275 EFTSRHSLEWKFLFL 289
>UNIPROTKB|Q9WVS9 [details] [associations]
symbol:Clock "Circadian locomoter output cycles protein
kaput" species:10116 "Rattus norvegicus" [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 RGD:620271
GO:GO:0005737 GO:GO:0000077 GO:GO:0005694 GO:GO:0009649
GO:GO:0016573 GO:GO:0003700 GO:GO:0005667 GO:GO:0000978
GO:GO:0004871 GO:GO:0000982 GO:GO:0032922 SMART:SM00086
GO:GO:0001190 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
GO:GO:0071479 GO:GO:0070888 GO:GO:0004402 CTD:9575 eggNOG:NOG300360
HOGENOM:HOG000234382 HOVERGEN:HBG050997 KO:K02223 EMBL:AB019258
EMBL:AB019259 IPI:IPI00201128 IPI:IPI00205319 RefSeq:NP_068628.1
UniGene:Rn.205839 ProteinModelPortal:Q9WVS9 STRING:Q9WVS9
PhosphoSite:Q9WVS9 GeneID:60447 KEGG:rno:60447 UCSC:RGD:620271
InParanoid:Q9WVS9 NextBio:612192 ArrayExpress:Q9WVS9
Genevestigator:Q9WVS9 GermOnline:ENSRNOG00000002175 Uniprot:Q9WVS9
Length = 862
Score = 134 (52.2 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 39/123 (31%), Positives = 62/123 (50%)
Query: 192 LFSSDLSPRERLIDVKSKQVIVGL-------PVSRQNHSEIEKRRRDKMNTYITELSAMV 244
LF+ S ++D + GL R + ++ EK+RRD+ N I EL +M+
Sbjct: 2 LFTVSCSKMSSIVDRDDSSIFDGLVEEDDKDKAKRVSRNKSEKKRRDQFNVLIKELGSML 61
Query: 245 PMCHAMSRKLDKLTVLRMAVQHL---KTIRGAVH-SYTEGHYKPAFLTDQELKHLILQAA 300
P +RK+DK TVL+ ++ L K I S +KP FL+++E L+L+A
Sbjct: 62 P---GNARKMDKSTVLQKSIDFLRKHKEITAQSDASEIRQDWKPTFLSNEEFTQLMLEAL 118
Query: 301 EGF 303
+GF
Sbjct: 119 DGF 121
Score = 55 (24.4 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 11/44 (25%), Positives = 24/44 (54%)
Query: 519 GKFLFVYQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNTLI 562
GK + Y+F KG ++ LQ+ + + W E+++ +T++
Sbjct: 334 GKSCY-YRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVV 376
Score = 51 (23.0 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 9/15 (60%), Positives = 13/15 (86%)
Query: 510 QFLSRHALDGKFLFV 524
+F SRH+L+ KFLF+
Sbjct: 275 EFTSRHSLEWKFLFL 289
>UNIPROTKB|Q91YB0 [details] [associations]
symbol:Clock "Circadian locomoter output cycles protein
kaput" species:1026970 "Nannospalax galili" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005667 "transcription factor complex"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0032922 "circadian regulation of
gene expression" evidence=ISS] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 EMBL:AJ318057
GO:GO:0005737 GO:GO:0005694 GO:GO:0003677 GO:GO:0016573
GO:GO:0003700 GO:GO:0006351 GO:GO:0006974 GO:GO:0005667
GO:GO:0004871 GO:GO:0032922 SMART:SM00086 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P36956 GO:GO:0004402 HOVERGEN:HBG050997
ProteinModelPortal:Q91YB0 Uniprot:Q91YB0
Length = 865
Score = 134 (52.2 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 39/123 (31%), Positives = 62/123 (50%)
Query: 192 LFSSDLSPRERLIDVKSKQVIVGL-------PVSRQNHSEIEKRRRDKMNTYITELSAMV 244
LF+ S ++D + GL R + ++ EK+RRD+ N I EL +M+
Sbjct: 2 LFTVSCSKMSSIVDRDDSSIFDGLVEEDDKDKAKRVSRNKSEKKRRDQFNVLIKELGSML 61
Query: 245 PMCHAMSRKLDKLTVLRMAVQHL---KTIRGAVH-SYTEGHYKPAFLTDQELKHLILQAA 300
P +RK+DK TVL+ ++ L K I S +KP FL+++E L+L+A
Sbjct: 62 P---GNARKMDKSTVLQKSIDFLRKHKEITAQSDASEIRQDWKPTFLSNEEFTQLMLEAL 118
Query: 301 EGF 303
+GF
Sbjct: 119 DGF 121
Score = 55 (24.4 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 11/44 (25%), Positives = 24/44 (54%)
Query: 519 GKFLFVYQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNTLI 562
GK + Y+F KG ++ LQ+ + + W E+++ +T++
Sbjct: 334 GKSCY-YRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVV 376
Score = 51 (23.0 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 9/15 (60%), Positives = 13/15 (86%)
Query: 510 QFLSRHALDGKFLFV 524
+F SRH+L+ KFLF+
Sbjct: 275 EFTSRHSLEWKFLFL 289
>UNIPROTKB|Q91YB2 [details] [associations]
symbol:Clock "Circadian locomoter output cycles protein
kaput" species:164324 "Spalax carmeli" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005667 "transcription factor complex"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0032922 "circadian regulation of
gene expression" evidence=ISS] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005737
GO:GO:0005694 GO:GO:0003677 GO:GO:0016573 GO:GO:0003700
GO:GO:0006351 GO:GO:0006974 GO:GO:0005667 GO:GO:0004871
GO:GO:0032922 SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 GO:GO:0004402 HOVERGEN:HBG050997 EMBL:AJ318058
ProteinModelPortal:Q91YB2 Uniprot:Q91YB2
Length = 865
Score = 131 (51.2 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 38/123 (30%), Positives = 62/123 (50%)
Query: 192 LFSSDLSPRERLIDVKSKQVIVGL-------PVSRQNHSEIEKRRRDKMNTYITELSAMV 244
+F+ S ++D + GL R + ++ EK+RRD+ N I EL +M+
Sbjct: 2 VFTVSCSKMSSIVDRDDSSIFDGLVEEDDKDKAKRVSRNKSEKKRRDQFNVLIKELGSML 61
Query: 245 PMCHAMSRKLDKLTVLRMAVQHL---KTIRGAVH-SYTEGHYKPAFLTDQELKHLILQAA 300
P +RK+DK TVL+ ++ L K I S +KP FL+++E L+L+A
Sbjct: 62 P---GNARKMDKSTVLQKSIDFLRKHKEITAQSDASEIRQDWKPTFLSNEEFTQLMLEAL 118
Query: 301 EGF 303
+GF
Sbjct: 119 DGF 121
Score = 55 (24.4 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 11/44 (25%), Positives = 24/44 (54%)
Query: 519 GKFLFVYQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNTLI 562
GK + Y+F KG ++ LQ+ + + W E+++ +T++
Sbjct: 334 GKSCY-YRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVV 376
Score = 51 (23.0 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 9/15 (60%), Positives = 13/15 (86%)
Query: 510 QFLSRHALDGKFLFV 524
+F SRH+L+ KFLF+
Sbjct: 275 EFTSRHSLEWKFLFL 289
>UNIPROTKB|F1NKI9 [details] [associations]
symbol:CLOCK "Circadian locomoter output cycles protein
kaput" species:9031 "Gallus gallus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005737
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 SMART:SM00086 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AADN02031315
EMBL:AADN02031314 IPI:IPI00581385 Ensembl:ENSGALT00000037539
ArrayExpress:F1NKI9 Uniprot:F1NKI9
Length = 854
Score = 130 (50.8 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 33/89 (37%), Positives = 52/89 (58%)
Query: 219 RQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHL---KTIRGAVH 275
R + ++ EK+RRD+ N I EL +M+P +RK+DK TVL+ ++ L K I
Sbjct: 36 RVSRNKSEKKRRDQFNVLIKELGSMLP---GNARKMDKSTVLQKSIDFLRKHKEITAQSD 92
Query: 276 -SYTEGHYKPAFLTDQELKHLILQAAEGF 303
S +KP FL+++E L+L+A +GF
Sbjct: 93 ASEIRQDWKPTFLSNEEFTQLMLEALDGF 121
Score = 55 (24.4 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 11/44 (25%), Positives = 24/44 (54%)
Query: 519 GKFLFVYQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNTLI 562
GK + Y+F KG ++ LQ+ + + W E+++ +T++
Sbjct: 334 GKSCY-YRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVV 376
Score = 51 (23.0 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 9/15 (60%), Positives = 13/15 (86%)
Query: 510 QFLSRHALDGKFLFV 524
+F SRH+L+ KFLF+
Sbjct: 275 EFTSRHSLEWKFLFL 289
>UNIPROTKB|F1NKI8 [details] [associations]
symbol:CLOCK "Circadian locomoter output cycles protein
kaput" species:9031 "Gallus gallus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005737
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0004871 SMART:SM00086 GeneTree:ENSGT00650000092935
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AADN02031315
EMBL:AADN02031314 IPI:IPI01017404 Ensembl:ENSGALT00000037540
ArrayExpress:F1NKI8 Uniprot:F1NKI8
Length = 859
Score = 130 (50.8 bits), Expect = 9.3e-06, Sum P(2) = 9.3e-06
Identities = 33/89 (37%), Positives = 52/89 (58%)
Query: 219 RQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHL---KTIRGAVH 275
R + ++ EK+RRD+ N I EL +M+P +RK+DK TVL+ ++ L K I
Sbjct: 37 RVSRNKSEKKRRDQFNVLIKELGSMLP---GNARKMDKSTVLQKSIDFLRKHKEITAQSD 93
Query: 276 -SYTEGHYKPAFLTDQELKHLILQAAEGF 303
S +KP FL+++E L+L+A +GF
Sbjct: 94 ASEIRQDWKPTFLSNEEFTQLMLEALDGF 122
Score = 55 (24.4 bits), Expect = 9.3e-06, Sum P(2) = 9.3e-06
Identities = 11/44 (25%), Positives = 24/44 (54%)
Query: 519 GKFLFVYQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNTLI 562
GK + Y+F KG ++ LQ+ + + W E+++ +T++
Sbjct: 335 GKSCY-YRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVV 377
Score = 51 (23.0 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 9/15 (60%), Positives = 13/15 (86%)
Query: 510 QFLSRHALDGKFLFV 524
+F SRH+L+ KFLF+
Sbjct: 276 EFTSRHSLEWKFLFL 290
>UNIPROTKB|Q91YA8 [details] [associations]
symbol:Clock "Circadian locomoter output cycles protein
kaput" species:134510 "Nannospalax judaei" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005667 "transcription factor complex"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0032922 "circadian regulation of
gene expression" evidence=ISS] InterPro:IPR000014
InterPro:IPR001067 InterPro:IPR011598 InterPro:IPR013655
InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989 Pfam:PF08447
PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005737
GO:GO:0005694 GO:GO:0003677 GO:GO:0016573 GO:GO:0003700
GO:GO:0006351 GO:GO:0006974 GO:GO:0005667 GO:GO:0004871
GO:GO:0032922 SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0004402 HOVERGEN:HBG050997 EMBL:AJ318059 HSSP:Q99814
ProteinModelPortal:Q91YA8 Uniprot:Q91YA8
Length = 865
Score = 130 (50.8 bits), Expect = 9.5e-06, Sum P(2) = 9.5e-06
Identities = 38/123 (30%), Positives = 62/123 (50%)
Query: 192 LFSSDLSPRERLIDVKSKQVIVGL-------PVSRQNHSEIEKRRRDKMNTYITELSAMV 244
LF+ S ++D + GL R + ++ EK+RRD+ N I EL +M+
Sbjct: 2 LFTVSCSKMSSIVDRDDSSIFDGLVEEDDKNKAKRVSRNKSEKKRRDQFNVLIKELGSML 61
Query: 245 PMCHAMSRKLDKLTVLRMAVQHL---KTIRGAVH-SYTEGHYKPAFLTDQELKHLILQAA 300
P +R++DK TVL+ ++ L K I S +KP FL+++E L+L+A
Sbjct: 62 P---GNAREMDKSTVLQKSIDFLRKHKEITAQSDASEIRQDWKPTFLSNEEFTQLMLEAL 118
Query: 301 EGF 303
+GF
Sbjct: 119 DGF 121
Score = 55 (24.4 bits), Expect = 9.5e-06, Sum P(2) = 9.5e-06
Identities = 11/44 (25%), Positives = 24/44 (54%)
Query: 519 GKFLFVYQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNTLI 562
GK + Y+F KG ++ LQ+ + + W E+++ +T++
Sbjct: 334 GKSCY-YRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVV 376
Score = 51 (23.0 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 9/15 (60%), Positives = 13/15 (86%)
Query: 510 QFLSRHALDGKFLFV 524
+F SRH+L+ KFLF+
Sbjct: 275 EFTSRHSLEWKFLFL 289
>UNIPROTKB|Q8QGQ6 [details] [associations]
symbol:CLOCK "Circadian locomoter output cycles protein
kaput" species:9031 "Gallus gallus" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0000077 "DNA damage checkpoint" evidence=IEA]
[GO:0000978 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding" evidence=IEA] [GO:0000982 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0001190
"RNA polymerase II transcription factor binding transcription
factor activity involved in positive regulation of transcription"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0032922 "circadian regulation of gene expression"
evidence=IEA] [GO:0070888 "E-box binding" evidence=IEA] [GO:0071479
"cellular response to ionizing radiation" evidence=IEA] [GO:0005694
"chromosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50113
PROSITE:PS50888 SMART:SM00091 SMART:SM00353 InterPro:IPR001610
GO:GO:0005737 GO:GO:0000077 GO:GO:0005694 GO:GO:0005667
GO:GO:0000978 GO:GO:0004871 GO:GO:0000982 GO:GO:0032922
SMART:SM00086 GO:GO:0001190 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 GO:GO:0071479 GO:GO:0070888 EMBL:AF132531 EMBL:AF144425
EMBL:AF246959 IPI:IPI00814237 IPI:IPI00819507 RefSeq:NP_989505.2
UniGene:Gga.2707 ProteinModelPortal:Q8QGQ6 STRING:Q8QGQ6
GeneID:373991 KEGG:gga:373991 CTD:9575 eggNOG:NOG300360
HOGENOM:HOG000234382 HOVERGEN:HBG050997 InParanoid:Q8QGQ6 KO:K02223
NextBio:20813520 ArrayExpress:Q8QGQ6 Uniprot:Q8QGQ6
Length = 875
Score = 130 (50.8 bits), Expect = 9.7e-06, Sum P(2) = 9.7e-06
Identities = 33/89 (37%), Positives = 52/89 (58%)
Query: 219 RQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHL---KTIRGAVH 275
R + ++ EK+RRD+ N I EL +M+P +RK+DK TVL+ ++ L K I
Sbjct: 36 RVSRNKSEKKRRDQFNVLIKELGSMLP---GNARKMDKSTVLQKSIDFLRKHKEITAQSD 92
Query: 276 -SYTEGHYKPAFLTDQELKHLILQAAEGF 303
S +KP FL+++E L+L+A +GF
Sbjct: 93 ASEIRQDWKPTFLSNEEFTQLMLEALDGF 121
Score = 55 (24.4 bits), Expect = 9.7e-06, Sum P(2) = 9.7e-06
Identities = 11/44 (25%), Positives = 24/44 (54%)
Query: 519 GKFLFVYQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNTLI 562
GK + Y+F KG ++ LQ+ + + W E+++ +T++
Sbjct: 334 GKSCY-YRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVV 376
Score = 51 (23.0 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 9/15 (60%), Positives = 13/15 (86%)
Query: 510 QFLSRHALDGKFLFV 524
+F SRH+L+ KFLF+
Sbjct: 275 EFTSRHSLEWKFLFL 289
>UNIPROTKB|F1P1C0 [details] [associations]
symbol:CLOCK "Circadian locomoter output cycles protein
kaput" species:9031 "Gallus gallus" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0000077 "DNA damage checkpoint" evidence=IEA]
[GO:0000978 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding" evidence=IEA] [GO:0000982 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0001190
"RNA polymerase II transcription factor binding transcription
factor activity involved in positive regulation of transcription"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0032922 "circadian regulation of gene
expression" evidence=IEA] [GO:0070888 "E-box binding" evidence=IEA]
[GO:0071479 "cellular response to ionizing radiation" evidence=IEA]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610 GO:GO:0005737
GO:GO:0000077 GO:GO:0005694 GO:GO:0005667 GO:GO:0000978
GO:GO:0004871 GO:GO:0000982 GO:GO:0032922 SMART:SM00086
GO:GO:0001190 GeneTree:ENSGT00650000092935 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0071479 GO:GO:0070888 IPI:IPI00819507
OMA:AHEKMAQ EMBL:AADN02031315 EMBL:AADN02031314
Ensembl:ENSGALT00000022394 ArrayExpress:F1P1C0 Uniprot:F1P1C0
Length = 877
Score = 130 (50.8 bits), Expect = 9.8e-06, Sum P(2) = 9.8e-06
Identities = 33/89 (37%), Positives = 52/89 (58%)
Query: 219 RQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHL---KTIRGAVH 275
R + ++ EK+RRD+ N I EL +M+P +RK+DK TVL+ ++ L K I
Sbjct: 36 RVSRNKSEKKRRDQFNVLIKELGSMLP---GNARKMDKSTVLQKSIDFLRKHKEITAQSD 92
Query: 276 -SYTEGHYKPAFLTDQELKHLILQAAEGF 303
S +KP FL+++E L+L+A +GF
Sbjct: 93 ASEIRQDWKPTFLSNEEFTQLMLEALDGF 121
Score = 55 (24.4 bits), Expect = 9.8e-06, Sum P(2) = 9.8e-06
Identities = 11/44 (25%), Positives = 24/44 (54%)
Query: 519 GKFLFVYQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNTLI 562
GK + Y+F KG ++ LQ+ + + W E+++ +T++
Sbjct: 334 GKSCY-YRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVV 376
Score = 51 (23.0 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 9/15 (60%), Positives = 13/15 (86%)
Query: 510 QFLSRHALDGKFLFV 524
+F SRH+L+ KFLF+
Sbjct: 275 EFTSRHSLEWKFLFL 289
>UNIPROTKB|E9PL54 [details] [associations]
symbol:ARNTL "Aryl hydrocarbon receptor nuclear
translocator-like protein 1" species:9606 "Homo sapiens"
[GO:0000060 "protein import into nucleus, translocation"
evidence=IEA] [GO:0000982 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0001190 "RNA polymerase II transcription factor
binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0016604 "nuclear body" evidence=IEA] [GO:0032922
"circadian regulation of gene expression" evidence=IEA] [GO:0042176
"regulation of protein catabolic process" evidence=IEA] [GO:0043425
"bHLH transcription factor binding" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 GO:GO:0003677
GO:GO:0007623 GO:GO:0005667 GO:GO:0000060 GO:GO:0000982
GO:GO:0001190 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0042176
EMBL:AC016884 EMBL:AC022878 HGNC:HGNC:701 IPI:IPI00981131
ProteinModelPortal:E9PL54 SMR:E9PL54 Ensembl:ENST00000533520
ArrayExpress:E9PL54 Bgee:E9PL54 Uniprot:E9PL54
Length = 101
Score = 110 (43.8 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 26/56 (46%), Positives = 39/56 (69%)
Query: 282 YKPAFLTDQELKHLILQAAE--GFLQN----HSEIEKRRRDKMNTYITELSAMVPT 331
Y+ + TD++ H L+ E G ++N HS+IEKRRRDKMN++I EL+++VPT
Sbjct: 46 YQESMDTDKDDPHGRLEYTEHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPT 101
Score = 102 (41.0 bits), Expect = 0.00011, P = 0.00011
Identities = 18/28 (64%), Positives = 26/28 (92%)
Query: 218 SRQNHSEIEKRRRDKMNTYITELSAMVP 245
+R+ HS+IEKRRRDKMN++I EL+++VP
Sbjct: 73 AREAHSQIEKRRRDKMNSFIDELASLVP 100
>ZFIN|ZDB-GENE-990630-14 [details] [associations]
symbol:clock "clock" species:7955 "Danio rerio"
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA;IDA] [GO:0004871 "signal transducer activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007165
"signal transduction" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA;IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IGI;IMP] [GO:0046982
"protein heterodimerization activity" evidence=NAS] [GO:0009648
"photoperiodism" evidence=IEP;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007623 "circadian rhythm" evidence=IGI;IMP]
[GO:0009416 "response to light stimulus" evidence=IGI;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0009266 "response to temperature stimulus" evidence=IDA]
[GO:0032922 "circadian regulation of gene expression" evidence=IMP]
InterPro:IPR000014 InterPro:IPR001067 InterPro:IPR011598
InterPro:IPR013655 InterPro:IPR013767 Pfam:PF00010 Pfam:PF00989
Pfam:PF08447 PRINTS:PR00785 PROSITE:PS50112 PROSITE:PS50888
SMART:SM00091 SMART:SM00353 InterPro:IPR001610
ZFIN:ZDB-GENE-990630-14 GO:GO:0005737 GO:GO:0045893 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0004871
GO:GO:0032922 SMART:SM00086 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0009266 GO:GO:0009648 CTD:9575 HOGENOM:HOG000234382
HOVERGEN:HBG050997 KO:K02223 HSSP:Q99814 EMBL:AF133306
IPI:IPI00503983 RefSeq:NP_571032.1 UniGene:Dr.81289
ProteinModelPortal:Q9W6J4 DIP:DIP-46451N STRING:Q9W6J4 GeneID:30140
KEGG:dre:30140 InParanoid:Q9W6J4 NextBio:20806615
ArrayExpress:Q9W6J4 Uniprot:Q9W6J4
Length = 893
Score = 128 (50.1 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 32/89 (35%), Positives = 51/89 (57%)
Query: 219 RQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHL---KTIRG-AV 274
R + + EK+RRD+ N I EL M+P +RK+DK T+L+ ++ L K I +
Sbjct: 27 RVSRNRSEKKRRDQFNVLIKELGTMLP---GNTRKMDKSTILQKSIDFLRKHKEIAAQSE 83
Query: 275 HSYTEGHYKPAFLTDQELKHLILQAAEGF 303
S +KP FL+++E L+L+A +GF
Sbjct: 84 SSEIRQDWKPPFLSNEEFTQLMLEALDGF 112
Score = 55 (24.4 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 11/44 (25%), Positives = 24/44 (54%)
Query: 519 GKFLFVYQFKNKGGTYVQLQSEWKNFRNPWTKDIEYLISKNTLI 562
GK + Y+F KG ++ LQ+ + + W E+++ +T++
Sbjct: 325 GKSCY-YRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVV 367
Score = 51 (23.0 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 9/15 (60%), Positives = 13/15 (86%)
Query: 510 QFLSRHALDGKFLFV 524
+F SRH+L+ KFLF+
Sbjct: 266 EFTSRHSLEWKFLFL 280
>UNIPROTKB|B1AQP1 [details] [associations]
symbol:USF1 "Upstream transcription factor 1, isoform
CRA_b" species:9606 "Homo sapiens" [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:CH471121 EMBL:AL591806 HOVERGEN:HBG004346
UniGene:Hs.414880 HGNC:HGNC:12593 HOGENOM:HOG000294174 ChiTaRS:USF1
IPI:IPI00514348 SMR:B1AQP1 STRING:B1AQP1 Ensembl:ENST00000368019
Uniprot:B1AQP1
Length = 282
Score = 124 (48.7 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 34/117 (29%), Positives = 61/117 (52%)
Query: 166 SAQGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQVIVGLPVSRQ-NHSE 224
+A G+ G +F ++ P++V + Q ++PR KS+ R+ H+E
Sbjct: 122 TAVGDGAGGQFFVMMSPQEVLQGGSQ---RSIAPRTHPYSPKSEAPRTTRDEKRRAQHNE 178
Query: 225 IEKRRRDKMNTYITELSAMVPMCHAMSRKL--DKLTVLRMAVQHLKTIRGAVHSYTE 279
+E+RRRDK+N +I +LS ++P C S K K +L A +++ +R + H +E
Sbjct: 179 VERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKACDYIQELRQSNHRLSE 235
>ZFIN|ZDB-GENE-040824-6 [details] [associations]
symbol:helt "hey-like transcription factor"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003650
InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
PROSITE:PS51054 SMART:SM00353 ZFIN:ZDB-GENE-040824-6 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P07270 GeneTree:ENSGT00700000104168
EMBL:AY549496 EMBL:BC092667 IPI:IPI00483820 RefSeq:NP_996948.1
UniGene:Dr.91513 ProteinModelPortal:Q6QB00
Ensembl:ENSDART00000078889 GeneID:404275 KEGG:dre:404275 CTD:391723
eggNOG:NOG330980 HOGENOM:HOG000082510 HOVERGEN:HBG054492
InParanoid:Q6QB00 OMA:PVSHKVI OrthoDB:EOG46144W NextBio:20817636
Bgee:Q6QB00 Uniprot:Q6QB00
Length = 270
Score = 122 (48.0 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 32/76 (42%), Positives = 42/76 (55%)
Query: 216 PVSRQNHSEIEKRRRDKMNTYITELSAMVPMCHAM--SRKLDKLTVLRMAVQHLKTIRGA 273
PVS H IEKRRRD++N + EL VPM A S KL+K +L M VQ+L+ + A
Sbjct: 61 PVS---HKVIEKRRRDRINRCLNELGKTVPMALAKQNSGKLEKAEILEMTVQYLRALHSA 117
Query: 274 VHSYTEGHYKPAFLTD 289
+ G K LT+
Sbjct: 118 --DFPRGREKGELLTE 131
>UNIPROTKB|E9PME6 [details] [associations]
symbol:USF1 "Upstream stimulatory factor 1" species:9606
"Homo sapiens" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL591806
HGNC:HGNC:12593 ChiTaRS:USF1 IPI:IPI00981390
ProteinModelPortal:E9PME6 SMR:E9PME6 Ensembl:ENST00000531842
ArrayExpress:E9PME6 Bgee:E9PME6 Uniprot:E9PME6
Length = 218
Score = 119 (46.9 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 34/115 (29%), Positives = 60/115 (52%)
Query: 168 QGELLGQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQVIVGLPVSRQ-NHSEIE 226
Q + GQ +F ++ P++V + Q ++PR KS+ R+ H+E+E
Sbjct: 92 QAVIQGQ-FFVMMSPQEVLQGGSQ---RSIAPRTHPYSPKSEAPRTTRDEKRRAQHNEVE 147
Query: 227 KRRRDKMNTYITELSAMVPMCHAMSRKL--DKLTVLRMAVQHLKTIRGAVHSYTE 279
+RRRDK+N +I +LS ++P C S K K +L A +++ +R + H +E
Sbjct: 148 RRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKACDYIQELRQSNHRLSE 202
>UNIPROTKB|E1BP66 [details] [associations]
symbol:LOC527932 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0021858 "GABAergic neuron differentiation in
basal ganglia" evidence=IEA] [GO:0010259 "multicellular organismal
aging" evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0007417 "central nervous system development"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0001967 "suckling behavior"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003650
InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
PROSITE:PS51054 SMART:SM00353 GO:GO:0003677 GO:GO:0001967
GO:GO:0007417 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0000122 GO:GO:0009791 GO:GO:0035264 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0010259 GeneTree:ENSGT00700000104168
OMA:PVSHKVI GO:GO:0021858 EMBL:DAAA02060186 IPI:IPI00706660
RefSeq:XP_003584202.1 RefSeq:XP_003587998.1
Ensembl:ENSBTAT00000019570 GeneID:527932 KEGG:bta:527932
Uniprot:E1BP66
Length = 242
Score = 118 (46.6 bits), Expect = 0.00018, P = 0.00018
Identities = 31/76 (40%), Positives = 41/76 (53%)
Query: 216 PVSRQNHSEIEKRRRDKMNTYITELSAMVPMCHAM--SRKLDKLTVLRMAVQHLKTIRGA 273
PVS H IEKRRRD++N + EL VPM A S KL+K +L M VQ+L+ + A
Sbjct: 12 PVS---HKVIEKRRRDRINRCLNELGKTVPMALAKQSSGKLEKAEILEMTVQYLRALHSA 68
Query: 274 VHSYTEGHYKPAFLTD 289
+ G K L +
Sbjct: 69 --DFPRGREKAELLAE 82
>UNIPROTKB|B7ZMI7 [details] [associations]
symbol:HELT "HELT protein" species:9606 "Homo sapiens"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR003650 InterPro:IPR011598
Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000082510 HOVERGEN:HBG054492 EMBL:AC093824
UniGene:Hs.531242 HGNC:HGNC:33783 EMBL:BC144567 IPI:IPI00963904
SMR:B7ZMI7 Ensembl:ENST00000515777 UCSC:uc011cko.2 Uniprot:B7ZMI7
Length = 242
Score = 118 (46.6 bits), Expect = 0.00018, P = 0.00018
Identities = 31/76 (40%), Positives = 41/76 (53%)
Query: 216 PVSRQNHSEIEKRRRDKMNTYITELSAMVPMCHAM--SRKLDKLTVLRMAVQHLKTIRGA 273
PVS H IEKRRRD++N + EL VPM A S KL+K +L M VQ+L+ + A
Sbjct: 12 PVS---HKVIEKRRRDRINRCLNELGKTVPMALAKQSSGKLEKAEILEMTVQYLRALHSA 68
Query: 274 VHSYTEGHYKPAFLTD 289
+ G K L +
Sbjct: 69 --DFPRGREKAELLAE 82
>UNIPROTKB|Q7Z5Y1 [details] [associations]
symbol:usf1-bd "Upstream stimulatory factor 1 BD"
species:9606 "Homo sapiens" [GO:0000432 "positive regulation of
transcription from RNA polymerase II promoter by glucose"
evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006006 "glucose metabolic process" evidence=IEA]
[GO:0009411 "response to UV" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0055088 "lipid
homeostasis" evidence=IEA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0009411
GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351
GO:GO:0006006 GO:GO:0055088 GO:GO:0003690 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P22415 EMBL:AL591806 CTD:7391
HOVERGEN:HBG004346 KO:K09106 RefSeq:NP_996888.1 UniGene:Hs.414880
DNASU:7391 GeneID:7391 KEGG:hsa:7391 HGNC:HGNC:12593
PharmGKB:PA37223 HOGENOM:HOG000294174 ChiTaRS:USF1 GenomeRNAi:7391
NextBio:28938 IPI:IPI00413700 EMBL:AB098540 SMR:Q7Z5Y1
STRING:Q7Z5Y1 Ensembl:ENST00000435396 Uniprot:Q7Z5Y1
Length = 251
Score = 117 (46.2 bits), Expect = 0.00025, P = 0.00025
Identities = 38/133 (28%), Positives = 67/133 (50%)
Query: 159 GCAISDLSAQGE--LLGQS-------WFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSK 209
G + ++ QG LLGQ+ +F ++ P++V + Q ++PR KS+
Sbjct: 75 GSTAAVVTTQGSEALLGQATPPGTGQFFVMMSPQEVLQGGSQ---RSIAPRTHPYSPKSE 131
Query: 210 QVIVGLPVSRQ-NHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKL--DKLTVLRMAVQH 266
R+ H+E+E+RRRDK+N +I +LS ++P C S K K +L A +
Sbjct: 132 APRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKACDY 191
Query: 267 LKTIRGAVHSYTE 279
++ +R + H +E
Sbjct: 192 IQELRQSNHRLSE 204
>UNIPROTKB|J9P9B3 [details] [associations]
symbol:HEY2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR003650
InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
PROSITE:PS51054 SMART:SM00353 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
InterPro:IPR018352 SMART:SM00511 GeneTree:ENSGT00700000104130
EMBL:AAEX03000421 Ensembl:ENSCAFT00000044703 OMA:FRECTAE
Uniprot:J9P9B3
Length = 149
Score = 105 (42.0 bits), Expect = 0.00032, P = 0.00032
Identities = 24/60 (40%), Positives = 35/60 (58%)
Query: 225 IEKRRRDKMNTYITELSAMVPMCHAM--SRKLDKLTVLRMAVQHLKTIRGAV-HSYTEGH 281
IEKRRRD++N ++EL +VP S KL+K +L+M V HLK ++ Y + H
Sbjct: 31 IEKRRRDRINNSLSELRRLVPTAFEKQGSAKLEKAEILQMTVDHLKMLQATGGKGYFDAH 90
>UNIPROTKB|J9P200 [details] [associations]
symbol:HELT "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR003650
InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
PROSITE:PS51054 SMART:SM00353 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00700000104168 OMA:PVSHKVI EMBL:AAEX03010501
Ensembl:ENSCAFT00000043273 Uniprot:J9P200
Length = 241
Score = 115 (45.5 bits), Expect = 0.00038, P = 0.00038
Identities = 31/70 (44%), Positives = 40/70 (57%)
Query: 216 PVSRQNHSEIEKRRRDKMNTYITELSAMVPMCHAM--SRKLDKLTVLRMAVQHLKTIRGA 273
PVS H IEKRRRD++N + EL VPM A S KL+K +L M VQ+L+ + A
Sbjct: 12 PVS---HKVIEKRRRDRINRCLNELGKTVPMALAKQSSGKLEKAEILEMTVQYLRALHSA 68
Query: 274 VHSYTEGHYK 283
H + G K
Sbjct: 69 -H-FPRGREK 76
>UNIPROTKB|Q6XBT4 [details] [associations]
symbol:USF1 "Upstream stimulatory factor 1" species:9913
"Bos taurus" [GO:0055088 "lipid homeostasis" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0043425 "bHLH transcription factor binding" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0032869
"cellular response to insulin stimulus" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IEA] [GO:0019086 "late viral mRNA
transcription" evidence=IEA] [GO:0009411 "response to UV"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0001666
"response to hypoxia" evidence=IEA] [GO:0000432 "positive
regulation of transcription from RNA polymerase II promoter by
glucose" evidence=IEA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0009411 GO:GO:0045893
GO:GO:0032869 GO:GO:0003677 GO:GO:0001666 GO:GO:0005667
GO:GO:0003705 GO:GO:0055088 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AY241931 EMBL:BC114684 IPI:IPI00695820 RefSeq:NP_001001161.1
UniGene:Bt.52208 ProteinModelPortal:Q6XBT4 SMR:Q6XBT4 PRIDE:Q6XBT4
Ensembl:ENSBTAT00000023760 GeneID:407239 KEGG:bta:407239 CTD:7391
GeneTree:ENSGT00390000004498 HOVERGEN:HBG004346 KO:K09106
OMA:TETHYTY OrthoDB:EOG41C6WV NextBio:20818488 GO:GO:0019086
Uniprot:Q6XBT4
Length = 310
Score = 117 (46.2 bits), Expect = 0.00041, P = 0.00041
Identities = 38/133 (28%), Positives = 67/133 (50%)
Query: 159 GCAISDLSAQGE--LLGQS-------WFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSK 209
G + ++ QG LLGQ+ +F ++ P++V + Q ++PR KS+
Sbjct: 134 GSTAAVVTTQGSEALLGQATPPGTGQFFVMMSPQEVLQGGSQ---RSIAPRTHPYSPKSE 190
Query: 210 QVIVGLPVSRQ-NHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKL--DKLTVLRMAVQH 266
R+ H+E+E+RRRDK+N +I +LS ++P C S K K +L A +
Sbjct: 191 APRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKACDY 250
Query: 267 LKTIRGAVHSYTE 279
++ +R + H +E
Sbjct: 251 IQELRQSNHRLSE 263
>UNIPROTKB|P22415 [details] [associations]
symbol:USF1 "Upstream stimulatory factor 1" species:9606
"Homo sapiens" [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0006006 "glucose metabolic process" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IMP;IDA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0019086 "late
viral mRNA transcription" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=TAS;IPI] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0000432 "positive
regulation of transcription from RNA polymerase II promoter by
glucose" evidence=ISS;IMP] [GO:0055088 "lipid homeostasis"
evidence=ISS] [GO:0001666 "response to hypoxia" evidence=IMP]
[GO:0000430 "regulation of transcription from RNA polymerase II
promoter by glucose" evidence=IC] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0043425 "bHLH transcription factor binding" evidence=IPI]
[GO:0046982 "protein heterodimerization activity" evidence=IPI]
[GO:0051918 "negative regulation of fibrinolysis" evidence=IC]
[GO:0042593 "glucose homeostasis" evidence=TAS] [GO:0009411
"response to UV" evidence=ISS] [GO:0019901 "protein kinase binding"
evidence=IPI] [GO:0032869 "cellular response to insulin stimulus"
evidence=IDA] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0042826 "histone deacetylase binding" evidence=IPI] [GO:0045990
"carbon catabolite regulation of transcription" evidence=TAS]
[GO:0005667 "transcription factor complex" evidence=IDA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0009411 GO:GO:0042803 GO:GO:0032869
Pathway_Interaction_DB:p38alphabetadownstreampathway GO:GO:0043565
GO:GO:0001666 GO:GO:0051918 GO:GO:0042593 GO:GO:0006006
GO:GO:0005667 GO:GO:0003705 GO:GO:0055088 GO:GO:0003690
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CH471121 EMBL:AL591806
GO:GO:0000432 CTD:7391 HOVERGEN:HBG004346 KO:K09106 OMA:TETHYTY
OrthoDB:EOG41C6WV GO:GO:0019086 EMBL:X55666 EMBL:AB017568
EMBL:AK314876 EMBL:AL832119 EMBL:AY593992 EMBL:BC035505
IPI:IPI00026559 PIR:S13525 RefSeq:NP_009053.1 RefSeq:NP_996888.1
UniGene:Hs.414880 PDB:1AN4 PDBsum:1AN4 ProteinModelPortal:P22415
SMR:P22415 DIP:DIP-654N IntAct:P22415 STRING:P22415
PhosphoSite:P22415 DMDM:137170 PaxDb:P22415 PRIDE:P22415 DNASU:7391
Ensembl:ENST00000368020 Ensembl:ENST00000368021 GeneID:7391
KEGG:hsa:7391 UCSC:uc001fxi.3 GeneCards:GC01M161009 HGNC:HGNC:12593
HPA:CAB001480 MIM:144250 MIM:191523 MIM:602491 neXtProt:NX_P22415
PharmGKB:PA37223 eggNOG:NOG272240 HOGENOM:HOG000294174
InParanoid:P22415 ChiTaRS:USF1 EvolutionaryTrace:P22415
GenomeRNAi:7391 NextBio:28938 ArrayExpress:P22415 Bgee:P22415
CleanEx:HS_USF1 Genevestigator:P22415 GermOnline:ENSG00000158773
Uniprot:P22415
Length = 310
Score = 117 (46.2 bits), Expect = 0.00041, P = 0.00041
Identities = 38/133 (28%), Positives = 67/133 (50%)
Query: 159 GCAISDLSAQGE--LLGQS-------WFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSK 209
G + ++ QG LLGQ+ +F ++ P++V + Q ++PR KS+
Sbjct: 134 GSTAAVVTTQGSEALLGQATPPGTGQFFVMMSPQEVLQGGSQ---RSIAPRTHPYSPKSE 190
Query: 210 QVIVGLPVSRQ-NHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKL--DKLTVLRMAVQH 266
R+ H+E+E+RRRDK+N +I +LS ++P C S K K +L A +
Sbjct: 191 APRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKACDY 250
Query: 267 LKTIRGAVHSYTE 279
++ +R + H +E
Sbjct: 251 IQELRQSNHRLSE 263
>UNIPROTKB|F1S178 [details] [associations]
symbol:USF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0055088 "lipid homeostasis" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0043425
"bHLH transcription factor binding" evidence=IEA] [GO:0042826
"histone deacetylase binding" evidence=IEA] [GO:0032869 "cellular
response to insulin stimulus" evidence=IEA] [GO:0019901 "protein
kinase binding" evidence=IEA] [GO:0019086 "late viral mRNA
transcription" evidence=IEA] [GO:0009411 "response to UV"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0001666
"response to hypoxia" evidence=IEA] [GO:0000432 "positive
regulation of transcription from RNA polymerase II promoter by
glucose" evidence=IEA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0009411 GO:GO:0045893
GO:GO:0032869 GO:GO:0003677 GO:GO:0001666 GO:GO:0005667
GO:GO:0003705 GO:GO:0055088 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00390000004498 OMA:TETHYTY GO:GO:0019086
EMBL:CU137698 Ensembl:ENSSSCT00000006981 ArrayExpress:F1S178
Uniprot:F1S178
Length = 310
Score = 117 (46.2 bits), Expect = 0.00041, P = 0.00041
Identities = 38/133 (28%), Positives = 67/133 (50%)
Query: 159 GCAISDLSAQGE--LLGQS-------WFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSK 209
G + ++ QG LLGQ+ +F ++ P++V + Q ++PR KS+
Sbjct: 134 GSTAAVVTTQGSEALLGQATPPGTGQFFVMMSPQEVLQGGSQ---RSIAPRTHPYSPKSE 190
Query: 210 QVIVGLPVSRQ-NHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKL--DKLTVLRMAVQH 266
R+ H+E+E+RRRDK+N +I +LS ++P C S K K +L A +
Sbjct: 191 APRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKACDY 250
Query: 267 LKTIRGAVHSYTE 279
++ +R + H +E
Sbjct: 251 IQELRQSNHRLSE 263
>MGI|MGI:99542 [details] [associations]
symbol:Usf1 "upstream transcription factor 1" species:10090
"Mus musculus" [GO:0000432 "positive regulation of transcription
from RNA polymerase II promoter by glucose" evidence=ISO;IMP]
[GO:0001666 "response to hypoxia" evidence=ISO] [GO:0003677 "DNA
binding" evidence=ISO;IDA] [GO:0003690 "double-stranded DNA
binding" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO;IDA] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005667 "transcription factor complex"
evidence=ISO;IC] [GO:0006006 "glucose metabolic process"
evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0009411 "response to UV"
evidence=IMP] [GO:0019086 "late viral mRNA transcription"
evidence=ISO] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0032869
"cellular response to insulin stimulus" evidence=ISO] [GO:0042803
"protein homodimerization activity" evidence=ISO] [GO:0042826
"histone deacetylase binding" evidence=ISO] [GO:0043425 "bHLH
transcription factor binding" evidence=ISO] [GO:0043565
"sequence-specific DNA binding" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0055088 "lipid
homeostasis" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 MGI:MGI:99542 GO:GO:0009411
GO:GO:0032869 GO:GO:0003677 GO:GO:0043565 GO:GO:0001666
GO:GO:0003700 GO:GO:0006006 GO:GO:0005667 GO:GO:0003705
GO:GO:0055088 GO:GO:0003690 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0000432 CTD:7391 GeneTree:ENSGT00390000004498
HOVERGEN:HBG004346 KO:K09106 OMA:TETHYTY OrthoDB:EOG41C6WV
GO:GO:0019086 eggNOG:NOG272240 EMBL:U41741 IPI:IPI00117062
RefSeq:NP_033506.1 UniGene:Mm.8 ProteinModelPortal:Q61069
SMR:Q61069 STRING:Q61069 PhosphoSite:Q61069 PaxDb:Q61069
PRIDE:Q61069 Ensembl:ENSMUST00000161241 Ensembl:ENSMUST00000167546
GeneID:22278 KEGG:mmu:22278 InParanoid:Q61069 NextBio:302403
Bgee:Q61069 CleanEx:MM_USF1 Genevestigator:Q61069
GermOnline:ENSMUSG00000026641 Uniprot:Q61069
Length = 310
Score = 117 (46.2 bits), Expect = 0.00041, P = 0.00041
Identities = 38/133 (28%), Positives = 67/133 (50%)
Query: 159 GCAISDLSAQGE--LLGQS-------WFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSK 209
G + ++ QG LLGQ+ +F ++ P++V + Q ++PR KS+
Sbjct: 134 GSTTAVVTTQGSEALLGQATPPSTGQFFVMMSPQEVLQGGSQ---RSIAPRTHPYSPKSE 190
Query: 210 QVIVGLPVSRQ-NHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKL--DKLTVLRMAVQH 266
R+ H+E+E+RRRDK+N +I +LS ++P C S K K +L A +
Sbjct: 191 APRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKACDY 250
Query: 267 LKTIRGAVHSYTE 279
++ +R + H +E
Sbjct: 251 IQELRQSNHRLSE 263
>RGD|620974 [details] [associations]
symbol:Usf1 "upstream transcription factor 1" species:10116
"Rattus norvegicus" [GO:0000432 "positive regulation of
transcription from RNA polymerase II promoter by glucose"
evidence=IEA;ISO] [GO:0001666 "response to hypoxia"
evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=ISO;IDA]
[GO:0003690 "double-stranded DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO;IDA;IMP] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISO;IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005667 "transcription factor complex"
evidence=IEA;ISO] [GO:0006006 "glucose metabolic process"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0009411 "response to UV"
evidence=IEA;ISO] [GO:0019086 "late viral mRNA transcription"
evidence=IEA;ISO] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0019901 "protein kinase binding" evidence=IEA;ISO] [GO:0032869
"cellular response to insulin stimulus" evidence=IEA;ISO]
[GO:0042803 "protein homodimerization activity" evidence=ISO;IMP]
[GO:0042826 "histone deacetylase binding" evidence=IEA;ISO]
[GO:0043425 "bHLH transcription factor binding" evidence=IEA;ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=ISO;IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IMP;IDA] [GO:0046982
"protein heterodimerization activity" evidence=ISO;IMP] [GO:0055088
"lipid homeostasis" evidence=IEA;ISO] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 RGD:620974 GO:GO:0005634
GO:GO:0009411 GO:GO:0042803 GO:GO:0032869 GO:GO:0043565
GO:GO:0001666 GO:GO:0045944 GO:GO:0003700 GO:GO:0006006
GO:GO:0005667 GO:GO:0003705 GO:GO:0055088 GO:GO:0003690
GO:GO:0046982 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P22415
EMBL:CH473985 CTD:7391 GeneTree:ENSGT00390000004498
HOVERGEN:HBG004346 KO:K09106 OrthoDB:EOG41C6WV GO:GO:0019086
eggNOG:NOG272240 HOGENOM:HOG000294174 EMBL:AF026476 EMBL:BC088849
IPI:IPI00209333 RefSeq:NP_113965.1 UniGene:Rn.10845 SMR:O35410
STRING:O35410 Ensembl:ENSRNOT00000005811 GeneID:83586
KEGG:rno:83586 UCSC:RGD:620974 InParanoid:O35410 NextBio:616131
Genevestigator:O35410 Uniprot:O35410
Length = 310
Score = 117 (46.2 bits), Expect = 0.00041, P = 0.00041
Identities = 38/133 (28%), Positives = 67/133 (50%)
Query: 159 GCAISDLSAQGE--LLGQS-------WFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSK 209
G + ++ QG LLGQ+ +F ++ P++V + Q ++PR KS+
Sbjct: 134 GSTTAVVTTQGSEALLGQATPPSTGQFFVMMSPQEVLQGGSQ---RSIAPRTHPYSPKSE 190
Query: 210 QVIVGLPVSRQ-NHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKL--DKLTVLRMAVQH 266
R+ H+E+E+RRRDK+N +I +LS ++P C S K K +L A +
Sbjct: 191 APRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKACDY 250
Query: 267 LKTIRGAVHSYTE 279
++ +R + H +E
Sbjct: 251 IQELRQSNHRLSE 263
>UNIPROTKB|F1PNG0 [details] [associations]
symbol:USF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046983 "protein dimerization activity"
evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 Gene3D:4.10.280.10 SUPFAM:SSF47459
GeneTree:ENSGT00390000004498 OMA:TETHYTY EMBL:AAEX03018452
Ensembl:ENSCAFT00000020148 Uniprot:F1PNG0
Length = 336
Score = 117 (46.2 bits), Expect = 0.00049, P = 0.00049
Identities = 38/133 (28%), Positives = 67/133 (50%)
Query: 159 GCAISDLSAQGE--LLGQS-------WFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSK 209
G + ++ QG LLGQ+ +F ++ P++V + Q ++PR KS+
Sbjct: 161 GSTAAVVTTQGSEALLGQATPPGTGQFFVMMSPQEVLQGGSQ---RSIAPRTHPYSPKSE 217
Query: 210 QVIVGLPVSRQ-NHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKL--DKLTVLRMAVQH 266
R+ H+E+E+RRRDK+N +I +LS ++P C S K K +L A +
Sbjct: 218 APRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKACDY 277
Query: 267 LKTIRGAVHSYTE 279
++ +R + H +E
Sbjct: 278 IQELRQSNHRLSE 290
>MGI|MGI:3040955 [details] [associations]
symbol:Helt "helt bHLH transcription factor" species:10090
"Mus musculus" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0001967
"suckling behavior" evidence=IMP] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005667 "transcription factor complex" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007417 "central nervous system development"
evidence=IMP] [GO:0009791 "post-embryonic development"
evidence=IMP] [GO:0010259 "multicellular organismal aging"
evidence=IMP] [GO:0010467 "gene expression" evidence=IMP]
[GO:0021858 "GABAergic neuron differentiation in basal ganglia"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030182 "neuron differentiation" evidence=IGI] [GO:0035264
"multicellular organism growth" evidence=IMP] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0046983 "protein
dimerization activity" evidence=IEA] InterPro:IPR003650
InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
PROSITE:PS51054 SMART:SM00353 MGI:MGI:3040955 GO:GO:0010467
GO:GO:0042803 GO:GO:0003677 GO:GO:0001967 GO:GO:0007417
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0000122
GO:GO:0009791 GO:GO:0035264 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0010259 GeneTree:ENSGT00700000104168 CTD:391723
eggNOG:NOG330980 HOGENOM:HOG000082510 HOVERGEN:HBG054492
OMA:PVSHKVI OrthoDB:EOG46144W GO:GO:0021858 EMBL:AB120968
EMBL:AB098077 EMBL:DQ294234 EMBL:BC103599 EMBL:BC103600
EMBL:BC103601 IPI:IPI00330943 RefSeq:NP_776150.2 UniGene:Mm.145631
ProteinModelPortal:Q7TS99 SMR:Q7TS99 STRING:Q7TS99
PhosphoSite:Q7TS99 PRIDE:Q7TS99 Ensembl:ENSMUST00000058636
GeneID:234219 KEGG:mmu:234219 UCSC:uc009lqb.1 InParanoid:Q7TS99
NextBio:382069 Bgee:Q7TS99 Genevestigator:Q7TS99 Uniprot:Q7TS99
Length = 240
Score = 114 (45.2 bits), Expect = 0.00049, P = 0.00049
Identities = 28/60 (46%), Positives = 36/60 (60%)
Query: 216 PVSRQNHSEIEKRRRDKMNTYITELSAMVPMCHAM--SRKLDKLTVLRMAVQHLKTIRGA 273
PVS H IEKRRRD++N + EL VPM A S KL+K +L M VQ+L+ + A
Sbjct: 12 PVS---HKVIEKRRRDRINRCLNELGKTVPMALAKQSSGKLEKAEILEMTVQYLRALHSA 68
>RGD|1564073 [details] [associations]
symbol:Helt "helt bHLH transcription factor" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0001967 "suckling behavior" evidence=IEA;ISO] [GO:0003677 "DNA
binding" evidence=IEA;ISO] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005667 "transcription
factor complex" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007417 "central nervous system
development" evidence=IEA;ISO] [GO:0009791 "post-embryonic
development" evidence=IEA;ISO] [GO:0010259 "multicellular
organismal aging" evidence=IEA;ISO] [GO:0010467 "gene expression"
evidence=ISO] [GO:0021858 "GABAergic neuron differentiation in
basal ganglia" evidence=IEA;ISO] [GO:0030182 "neuron
differentiation" evidence=ISO] [GO:0035264 "multicellular organism
growth" evidence=IEA;ISO] [GO:0042803 "protein homodimerization
activity" evidence=IEA;ISO] InterPro:IPR003650 InterPro:IPR011598
Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054
SMART:SM00353 RGD:1564073 GO:GO:0003677 GO:GO:0001967 GO:GO:0007417
GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0000122
GO:GO:0009791 GO:GO:0035264 Gene3D:4.10.280.10 SUPFAM:SSF47459
GO:GO:0010259 GeneTree:ENSGT00700000104168 OMA:PVSHKVI
OrthoDB:EOG46144W GO:GO:0021858 IPI:IPI00209585
RefSeq:XP_003751648.1 RefSeq:XP_003752951.1
Ensembl:ENSRNOT00000014360 GeneID:498633 KEGG:rno:498633 CTD:498633
Uniprot:D4ADJ5
Length = 240
Score = 114 (45.2 bits), Expect = 0.00049, P = 0.00049
Identities = 28/60 (46%), Positives = 36/60 (60%)
Query: 216 PVSRQNHSEIEKRRRDKMNTYITELSAMVPMCHAM--SRKLDKLTVLRMAVQHLKTIRGA 273
PVS H IEKRRRD++N + EL VPM A S KL+K +L M VQ+L+ + A
Sbjct: 12 PVS---HKVIEKRRRDRINRCLNELGKTVPMALAKQSSGKLEKAEILEMTVQYLRALHSA 68
>MGI|MGI:99961 [details] [associations]
symbol:Usf2 "upstream transcription factor 2" species:10090
"Mus musculus" [GO:0000432 "positive regulation of transcription
from RNA polymerase II promoter by glucose" evidence=ISO;IMP]
[GO:0000978 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IDA] [GO:0003690 "double-stranded DNA binding"
evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0007595 "lactation" evidence=IMP] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0043425 "bHLH
transcription factor binding" evidence=ISO] [GO:0043565
"sequence-specific DNA binding" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0055088 "lipid
homeostasis" evidence=IMP] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 MGI:MGI:99961 GO:GO:0005634
GO:GO:0003677 GO:GO:0043565 GO:GO:0003705 GO:GO:0055088
GO:GO:0003690 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0007595
GO:GO:0000432 GeneTree:ENSGT00390000004498 HOVERGEN:HBG004346
KO:K09106 eggNOG:NOG272240 HOGENOM:HOG000294174 CTD:7392
OMA:MVGESAR OrthoDB:EOG49ZXQ1 EMBL:U12283 EMBL:U12282 EMBL:U01662
EMBL:U01663 EMBL:X77602 EMBL:X77605 EMBL:BC019729 EMBL:BC082995
EMBL:AK146871 IPI:IPI00137867 IPI:IPI00223406 PIR:A55111
RefSeq:NP_035810.1 UniGene:Mm.322453 UniGene:Mm.466352
ProteinModelPortal:Q64705 SMR:Q64705 IntAct:Q64705 STRING:Q64705
PhosphoSite:Q64705 PaxDb:Q64705 PRIDE:Q64705
Ensembl:ENSMUST00000058860 Ensembl:ENSMUST00000108119 GeneID:22282
KEGG:mmu:22282 UCSC:uc009ghg.2 UCSC:uc009ghh.2 InParanoid:Q64705
NextBio:302407 Bgee:Q64705 CleanEx:MM_USF2 Genevestigator:Q64705
GermOnline:ENSMUSG00000058239 Uniprot:Q64705
Length = 346
Score = 115 (45.5 bits), Expect = 0.00086, P = 0.00086
Identities = 30/102 (29%), Positives = 53/102 (51%)
Query: 173 GQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQVIVGLPVSRQ-NHSEIEKRRRD 231
G ++ ++ P+DV + Q ++PR K R+ H+E+E+RRRD
Sbjct: 193 GGQFYVMMTPQDVLQTGTQ---RTIAPRTHPYSPKIDGTRTPRDERRRAQHNEVERRRRD 249
Query: 232 KMNTYITELSAMVPMCHAMSRKL--DKLTVLRMAVQHLKTIR 271
K+N +I +LS ++P CHA + K K +L A +++ +R
Sbjct: 250 KINNWIVQLSKIIPDCHADNSKTGASKGGILSKACDYIRELR 291
>RGD|620975 [details] [associations]
symbol:Usf2 "upstream transcription factor 2, c-fos interacting"
species:10116 "Rattus norvegicus" [GO:0000432 "positive regulation
of transcription from RNA polymerase II promoter by glucose"
evidence=IEA;ISO] [GO:0000978 "RNA polymerase II core promoter
proximal region sequence-specific DNA binding" evidence=IDA]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003690
"double-stranded DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISO;IDA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0007595 "lactation" evidence=IEA;ISO]
[GO:0042803 "protein homodimerization activity" evidence=ISO;IMP]
[GO:0043425 "bHLH transcription factor binding" evidence=IEA;ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=ISO;IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IMP] [GO:0046982
"protein heterodimerization activity" evidence=ISO;IMP] [GO:0055088
"lipid homeostasis" evidence=IEA;ISO] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 RGD:620975 GO:GO:0005634
GO:GO:0042803 GO:GO:0045944 GO:GO:0003700 GO:GO:0003705
GO:GO:0000978 GO:GO:0055088 GO:GO:0003690 GO:GO:0046982
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0007595 GO:GO:0000432
GeneTree:ENSGT00390000004498 HOVERGEN:HBG004346 KO:K09106
eggNOG:NOG272240 HOGENOM:HOG000294174 CTD:7392 OMA:MVGESAR
OrthoDB:EOG49ZXQ1 EMBL:AB035647 EMBL:AB035648 EMBL:AB035649
EMBL:AB035650 EMBL:AB035651 EMBL:AB047556 EMBL:X90823
IPI:IPI00190554 IPI:IPI00190556 IPI:IPI00230940 IPI:IPI00454490
IPI:IPI00656339 RefSeq:NP_112401.1 UniGene:Rn.44637
ProteinModelPortal:Q63665 SMR:Q63665 STRING:Q63665
Ensembl:ENSRNOT00000028548 Ensembl:ENSRNOT00000028550
Ensembl:ENSRNOT00000041809 GeneID:81817 KEGG:rno:81817
UCSC:RGD:620975 InParanoid:Q63665 NextBio:615725
Genevestigator:Q63665 GermOnline:ENSRNOG00000021030 Uniprot:Q63665
Length = 346
Score = 115 (45.5 bits), Expect = 0.00086, P = 0.00086
Identities = 30/102 (29%), Positives = 53/102 (51%)
Query: 173 GQSWFDILHPKDVAKVKEQLFSSDLSPRERLIDVKSKQVIVGLPVSRQ-NHSEIEKRRRD 231
G ++ ++ P+DV + Q ++PR K R+ H+E+E+RRRD
Sbjct: 193 GGQFYVMMTPQDVLQTGTQ---RTIAPRTHPYSPKIDGTRTPRDERRRAQHNEVERRRRD 249
Query: 232 KMNTYITELSAMVPMCHAMSRKL--DKLTVLRMAVQHLKTIR 271
K+N +I +LS ++P CHA + K K +L A +++ +R
Sbjct: 250 KINNWIVQLSKIIPDCHADNSKTGASKGGILSKACDYIRELR 291
>UNIPROTKB|C9J9N2 [details] [associations]
symbol:EPAS1 "Endothelial PAS domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0004871 "signal transducer
activity" evidence=IEA] [GO:0001077 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=IEA] [GO:0001525 "angiogenesis"
evidence=IEA] [GO:0001892 "embryonic placenta development"
evidence=IEA] [GO:0001974 "blood vessel remodeling" evidence=IEA]
[GO:0002027 "regulation of heart rate" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007005 "mitochondrion organization" evidence=IEA] [GO:0007601
"visual perception" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0030218 "erythrocyte differentiation"
evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
[GO:0042415 "norepinephrine metabolic process" evidence=IEA]
[GO:0043129 "surfactant homeostasis" evidence=IEA] [GO:0043619
"regulation of transcription from RNA polymerase II promoter in
response to oxidative stress" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0048469 "cell
maturation" evidence=IEA] [GO:0048625 "myoblast cell fate
commitment" evidence=IEA] InterPro:IPR000014 InterPro:IPR001067
InterPro:IPR011598 InterPro:IPR013767 Pfam:PF00989 PRINTS:PR00785
PROSITE:PS50112 PROSITE:PS50888 SMART:SM00091 SMART:SM00353
GO:GO:0005737 GO:GO:0030324 GO:GO:0007601 GO:GO:0043565
GO:GO:0001666 GO:GO:0001525 GO:GO:0005667 GO:GO:0001077
GO:GO:0004871 GO:GO:0001974 GO:GO:0030218 TIGRFAMs:TIGR00229
SUPFAM:SSF47459 GO:GO:0007005 GO:GO:0002027 GO:GO:0001892
GO:GO:0043619 GO:GO:0042415 GO:GO:0048469 GO:GO:0043129
HGNC:HGNC:3374 ChiTaRS:EPAS1 GO:GO:0048625 HOGENOM:HOG000236298
EMBL:AC016696 EMBL:AC016912 IPI:IPI00917611
ProteinModelPortal:C9J9N2 SMR:C9J9N2 STRING:C9J9N2
Ensembl:ENST00000449347 ArrayExpress:C9J9N2 Bgee:C9J9N2
Uniprot:C9J9N2
Length = 259
Score = 106 (42.4 bits), Expect = 0.00086, Sum P(2) = 0.00086
Identities = 26/88 (29%), Positives = 49/88 (55%)
Query: 219 RQNHSEIEKRRRDKMNTYITELSAMVPMCHAMSRKLDKLTVLRMAVQHLKT--IRGAVHS 276
++ + + RR K EL+ +P+ H++S LDK +++R+A+ L+T + +V S
Sbjct: 16 KEKSRDAARCRRSKETEVFYELAHELPLPHSVSSHLDKASIMRLAISFLRTHKLLSSVCS 75
Query: 277 YTEGHYKPAFLTDQELKHLILQAAEGFL 304
E + DQ++ +L L+A EGF+
Sbjct: 76 ENESEAE----ADQQMDNLYLKALEGFI 99
Score = 46 (21.3 bits), Expect = 0.00086, Sum P(2) = 0.00086
Identities = 8/13 (61%), Positives = 11/13 (84%)
Query: 511 FLSRHALDGKFLF 523
FLSRH++D KF +
Sbjct: 244 FLSRHSMDMKFTY 256
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.132 0.389 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 563 469 0.00098 118 3 11 22 0.40 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 132
No. of states in DFA: 617 (66 KB)
Total size of DFA: 290 KB (2150 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:02
No. of threads or processors used: 24
Search cpu time: 36.57u 0.10s 36.67t Elapsed: 00:00:41
Total cpu time: 36.60u 0.10s 36.70t Elapsed: 00:00:43
Start: Thu Aug 15 16:16:32 2013 End: Thu Aug 15 16:17:15 2013
WARNINGS ISSUED: 1