BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14585
(66 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9I8T7|BMAL1_CHICK Aryl hydrocarbon receptor nuclear translocator-like protein 1
OS=Gallus gallus GN=ARNTL PE=1 SV=1
Length = 633
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/38 (84%), Positives = 34/38 (89%)
Query: 28 GAPTTGNDEAAMAVIMSLLEADAGLGGPVDFSGLPWPL 65
G+ + NDEAAMAVIMSLLEADAGLGGPVDFS LPWPL
Sbjct: 596 GSSSPSNDEAAMAVIMSLLEADAGLGGPVDFSDLPWPL 633
>sp|Q6YGZ5|BMAL1_TYTAL Aryl hydrocarbon receptor nuclear translocator-like protein 1
OS=Tyto alba GN=ARNTL PE=2 SV=1
Length = 633
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/38 (84%), Positives = 34/38 (89%)
Query: 28 GAPTTGNDEAAMAVIMSLLEADAGLGGPVDFSGLPWPL 65
G+ + NDEAAMAVIMSLLEADAGLGGPVDFS LPWPL
Sbjct: 596 GSSSPSNDEAAMAVIMSLLEADAGLGGPVDFSDLPWPL 633
>sp|Q5R4T2|BMAL1_PONAB Aryl hydrocarbon receptor nuclear translocator-like protein 1
OS=Pongo abelii GN=ARNTL PE=2 SV=1
Length = 625
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/38 (84%), Positives = 34/38 (89%)
Query: 28 GAPTTGNDEAAMAVIMSLLEADAGLGGPVDFSGLPWPL 65
G+ + NDEAAMAVIMSLLEADAGLGGPVDFS LPWPL
Sbjct: 588 GSSSPSNDEAAMAVIMSLLEADAGLGGPVDFSDLPWPL 625
>sp|O00327|BMAL1_HUMAN Aryl hydrocarbon receptor nuclear translocator-like protein 1
OS=Homo sapiens GN=ARNTL PE=1 SV=2
Length = 626
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/38 (84%), Positives = 34/38 (89%)
Query: 28 GAPTTGNDEAAMAVIMSLLEADAGLGGPVDFSGLPWPL 65
G+ + NDEAAMAVIMSLLEADAGLGGPVDFS LPWPL
Sbjct: 589 GSSSPSNDEAAMAVIMSLLEADAGLGGPVDFSDLPWPL 626
>sp|Q91YA9|BMAL1_NANGA Aryl hydrocarbon receptor nuclear translocator-like protein 1
OS=Nannospalax galili GN=Arntl PE=1 SV=1
Length = 626
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/38 (84%), Positives = 34/38 (89%)
Query: 28 GAPTTGNDEAAMAVIMSLLEADAGLGGPVDFSGLPWPL 65
G+ + NDEAAMAVIMSLLEADAGLGGPVDFS LPWPL
Sbjct: 589 GSSSPSNDEAAMAVIMSLLEADAGLGGPVDFSDLPWPL 626
>sp|O88529|BMAL1_MESAU Aryl hydrocarbon receptor nuclear translocator-like protein 1
OS=Mesocricetus auratus GN=ARNTL PE=2 SV=1
Length = 626
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/38 (84%), Positives = 34/38 (89%)
Query: 28 GAPTTGNDEAAMAVIMSLLEADAGLGGPVDFSGLPWPL 65
G+ + NDEAAMAVIMSLLEADAGLGGPVDFS LPWPL
Sbjct: 589 GSSSPSNDEAAMAVIMSLLEADAGLGGPVDFSDLPWPL 626
>sp|Q9EPW1|BMAL1_RAT Aryl hydrocarbon receptor nuclear translocator-like protein 1
OS=Rattus norvegicus GN=Arntl PE=2 SV=4
Length = 626
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/38 (84%), Positives = 34/38 (89%)
Query: 28 GAPTTGNDEAAMAVIMSLLEADAGLGGPVDFSGLPWPL 65
G+ + NDEAAMAVIMSLLEADAGLGGPVDFS LPWPL
Sbjct: 589 GSSSPSNDEAAMAVIMSLLEADAGLGGPVDFSDLPWPL 626
>sp|A0MLS5|BMAL1_HORSE Aryl hydrocarbon receptor nuclear translocator-like protein 1
OS=Equus caballus GN=ARNTL PE=2 SV=1
Length = 626
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/38 (84%), Positives = 34/38 (89%)
Query: 28 GAPTTGNDEAAMAVIMSLLEADAGLGGPVDFSGLPWPL 65
G+ + NDEAAMAVIMSLLEADAGLGGPVDFS LPWPL
Sbjct: 589 GSSSPSNDEAAMAVIMSLLEADAGLGGPVDFSDLPWPL 626
>sp|Q9WTL8|BMAL1_MOUSE Aryl hydrocarbon receptor nuclear translocator-like protein 1
OS=Mus musculus GN=Arntl PE=1 SV=2
Length = 632
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/38 (84%), Positives = 34/38 (89%)
Query: 28 GAPTTGNDEAAMAVIMSLLEADAGLGGPVDFSGLPWPL 65
G+ + NDEAAMAVIMSLLEADAGLGGPVDFS LPWPL
Sbjct: 595 GSSSPSNDEAAMAVIMSLLEADAGLGGPVDFSDLPWPL 632
>sp|Q8WYA1|BMAL2_HUMAN Aryl hydrocarbon receptor nuclear translocator-like protein 2
OS=Homo sapiens GN=ARNTL2 PE=1 SV=2
Length = 636
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 18/32 (56%), Positives = 22/32 (68%)
Query: 34 NDEAAMAVIMSLLEADAGLGGPVDFSGLPWPL 65
ND+ AMA M+ LEA+ GLG P DFS + W L
Sbjct: 605 NDDTAMAAFMNYLEAEGGLGDPGDFSDIQWTL 636
>sp|Q8QGQ7|BMAL2_CHICK Aryl hydrocarbon receptor nuclear translocator-like protein 2
OS=Gallus gallus GN=ARNTL2 PE=1 SV=1
Length = 622
Score = 38.9 bits (89), Expect = 0.009, Method: Composition-based stats.
Identities = 16/32 (50%), Positives = 21/32 (65%)
Query: 34 NDEAAMAVIMSLLEADAGLGGPVDFSGLPWPL 65
ND+ AM +M+ LEAD GLG P + S + W L
Sbjct: 591 NDDTAMTALMNYLEADGGLGDPAELSDIQWAL 622
>sp|Q2VPD4|BMAL2_MOUSE Aryl hydrocarbon receptor nuclear translocator-like protein 2
OS=Mus musculus GN=Arntl2 PE=2 SV=2
Length = 579
Score = 35.4 bits (80), Expect = 0.11, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 25/49 (51%)
Query: 17 GMISPPSPQSGGAPTTGNDEAAMAVIMSLLEADAGLGGPVDFSGLPWPL 65
G + S Q G +D MA M+ LEA+ GLG P DFS + W L
Sbjct: 531 GPLPGDSAQLGFDVLCDSDSIDMAAFMNYLEAEGGLGDPGDFSDIQWAL 579
>sp|P46030|PTR2_CANAX Peptide transporter PTR2 OS=Candida albicans GN=PTR2 PE=3 SV=1
Length = 623
Score = 29.6 bits (65), Expect = 5.5, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 27/58 (46%)
Query: 8 TGDQDDVISGMISPPSPQSGGAPTTGNDEAAMAVIMSLLEADAGLGGPVDFSGLPWPL 65
TG + I I P SP GAP G+ +A+ + L+A + L + F +PL
Sbjct: 91 TGILTNYIQRRIDPDSPHGWGAPPPGSPDASAGALGKGLQAASALTNLLTFLAYVFPL 148
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.134 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,223,480
Number of Sequences: 539616
Number of extensions: 1060115
Number of successful extensions: 2557
Number of sequences better than 100.0: 23
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 2538
Number of HSP's gapped (non-prelim): 23
length of query: 66
length of database: 191,569,459
effective HSP length: 38
effective length of query: 28
effective length of database: 171,064,051
effective search space: 4789793428
effective search space used: 4789793428
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 55 (25.8 bits)