RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy14585
         (66 letters)



>d2nvpa1 a.102.1.8 (A:2-427) Hypothetical protein CPF0428
           {Clostridium perfringens [TaxId: 1502]}
          Length = 426

 Score = 25.5 bits (56), Expect = 0.47
 Identities = 11/23 (47%), Positives = 12/23 (52%)

Query: 31  TTGNDEAAMAVIMSLLEADAGLG 53
           TT N E    +I  L E DAG G
Sbjct: 366 TTNNQEEIDQLIKLLKETDAGTG 388


>d2p0va1 a.102.1.8 (A:39-481) Hypothetical protein BT3781
           {Bacteroides thetaiotaomicron [TaxId: 818]}
          Length = 443

 Score = 24.0 bits (52), Expect = 1.8
 Identities = 9/23 (39%), Positives = 12/23 (52%)

Query: 31  TTGNDEAAMAVIMSLLEADAGLG 53
           T+ ND      I  L++ DAG G
Sbjct: 375 TSQNDAEIKTCIKMLMDTDAGTG 397


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.310    0.134    0.408 

Gapped
Lambda     K      H
   0.267   0.0660    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 244,158
Number of extensions: 8488
Number of successful extensions: 11
Number of sequences better than 10.0: 1
Number of HSP's gapped: 11
Number of HSP's successfully gapped: 2
Length of query: 66
Length of database: 2,407,596
Length adjustment: 35
Effective length of query: 31
Effective length of database: 1,927,046
Effective search space: 59738426
Effective search space used: 59738426
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 47 (22.0 bits)