BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14589
(655 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1PHZ|A Chain A, Structure Of Phosphorylated Phenylalanine Hydroxylase
pdb|2PHM|A Chain A, Structure Of Phenylalanine Hydroxylase Dephosphorylated
Length = 429
Score = 340 bits (871), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 183/320 (57%), Positives = 225/320 (70%), Gaps = 37/320 (11%)
Query: 264 VIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFM--VECAPGGDLSSVI 321
+IFS ++EVGALAK L+LF+++++NL HIESR S ++ YEF ++ L S+I
Sbjct: 37 LIFS-LKEEVGALAKVLRLFEENDINLTHIESRPSRLNKDEYEFFTYLDKRTKPVLGSII 95
Query: 322 ESLRSSC-SYINIISRNHNQFHGVPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVY 380
+SLR+ + ++ +SR+ + + VPWFPR I+ELDRFANQILSYG+ELDADHPGF DPVY
Sbjct: 96 KSLRNDIGATVHELSRDKEK-NTVPWFPRTIQELDRFANQILSYGAELDADHPGFKDPVY 154
Query: 381 RARRKYFADLAFNYKHSILL----------------------------MPEHNHVFPLLI 412
RARRK FAD+A+NY+H + EHNH+FPLL
Sbjct: 155 RARRKQFADIAYNYRHGQPIPRVEYTEEEKQTWGTVFRTLKALYKTHACYEHNHIFPLLE 214
Query: 413 QNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSK 472
+ CG+ EDNIPQLED+S+FL+ TGF LRPVAGLLSSRDFL GLAFRVFH TQYIRH SK
Sbjct: 215 KYCGFREDNIPQLEDVSQFLQTCTGFRLRPVAGLLSSRDFLGGLAFRVFHCTQYIRHGSK 274
Query: 473 PLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLA 532
P+YTPEPD+CHELLGHVPLF+D SFAQFSQEIGLASLGAPDEY+E+LAT F + L
Sbjct: 275 PMYTPEPDICHELLGHVPLFSDRSFAQFSQEIGLASLGAPDEYIEKLATIYWFTVEFGLC 334
Query: 533 SLSPDSTGFSLRPVAGLLSS 552
+ AGLLSS
Sbjct: 335 KEGDSIKAYG----AGLLSS 350
Score = 188 bits (477), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 84/112 (75%), Positives = 95/112 (84%)
Query: 1 GEPLPRVDYTAEETKTWGEVFRNLTKLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDI 60
G+P+PRV+YT EE +TWG VFR L LY THAC EHNH+FPLL + CG+ EDNIPQLED+
Sbjct: 171 GQPIPRVEYTEEEKQTWGTVFRTLKALYKTHACYEHNHIFPLLEKYCGFREDNIPQLEDV 230
Query: 61 SKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPD 112
S+FL+ TGF LRPVAGLLSSRDFL GLAFRVFH TQYIRH SKP+YTPEPD
Sbjct: 231 SQFLQTCTGFRLRPVAGLLSSRDFLGGLAFRVFHCTQYIRHGSKPMYTPEPD 282
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 72/91 (79%), Positives = 78/91 (85%), Gaps = 3/91 (3%)
Query: 528 VPRLASLSP---DSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDV 584
+P+L +S TGF LRPVAGLLSSRDFL GLAFRVFH TQYIRH SKP+YTPEPD+
Sbjct: 224 IPQLEDVSQFLQTCTGFRLRPVAGLLSSRDFLGGLAFRVFHCTQYIRHGSKPMYTPEPDI 283
Query: 585 CHELLGHVPLFADPSFAQFSQEIGLASLGAP 615
CHELLGHVPLF+D SFAQFSQEIGLASLGAP
Sbjct: 284 CHELLGHVPLFSDRSFAQFSQEIGLASLGAP 314
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 40/48 (83%), Positives = 45/48 (93%)
Query: 162 HTIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKH 209
TI+ELDRFANQILSYG+ELDADHPGF DPVYRARRK FAD+A+NY+H
Sbjct: 123 RTIQELDRFANQILSYGAELDADHPGFKDPVYRARRKQFADIAYNYRH 170
>pdb|4ANP|A Chain A, Crystal Structure Of Human Phenylalanine Hydroxylase In
Complex With A Pharmacological Chaperone
Length = 324
Score = 295 bits (755), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 153/250 (61%), Positives = 178/250 (71%), Gaps = 33/250 (13%)
Query: 331 INIISRNHNQFHGVPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADL 390
++ +SR+ + VPWFPR I+ELDRFANQILSYG+ELDADHPGF DPVYRARRK FAD+
Sbjct: 3 VHELSRDKKK-DTVPWFPRTIQELDRFANQILSYGAELDADHPGFKDPVYRARRKQFADI 61
Query: 391 AFNYKHS-----ILLMP-----------------------EHNHVFPLLIQNCGYAEDNI 422
A+NY+H + M E+NH+FPLL + CG+ EDNI
Sbjct: 62 AYNYRHGQPIPRVEYMEEEKKTWGTVFKTLKSLYKTHACYEYNHIFPLLEKYCGFHEDNI 121
Query: 423 PQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVC 482
PQLED+S+FL+ TGF LRPVAGLLSSRDFL GLAFRVFH TQYIRH SKP+YTPEPD+C
Sbjct: 122 PQLEDVSQFLQTCTGFRLRPVAGLLSSRDFLGGLAFRVFHCTQYIRHGSKPMYTPEPDIC 181
Query: 483 HELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTGFS 542
HELLGHVPLF+D SFAQFSQEIGLASLGAPDEY+E+LAT F + L +
Sbjct: 182 HELLGHVPLFSDRSFAQFSQEIGLASLGAPDEYIEKLATIYWFTVEFGLCKQGDSIKAYG 241
Query: 543 LRPVAGLLSS 552
AGLLSS
Sbjct: 242 ----AGLLSS 247
Score = 182 bits (463), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 82/112 (73%), Positives = 94/112 (83%)
Query: 1 GEPLPRVDYTAEETKTWGEVFRNLTKLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDI 60
G+P+PRV+Y EE KTWG VF+ L LY THAC E+NH+FPLL + CG+ EDNIPQLED+
Sbjct: 68 GQPIPRVEYMEEEKKTWGTVFKTLKSLYKTHACYEYNHIFPLLEKYCGFHEDNIPQLEDV 127
Query: 61 SKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPD 112
S+FL+ TGF LRPVAGLLSSRDFL GLAFRVFH TQYIRH SKP+YTPEPD
Sbjct: 128 SQFLQTCTGFRLRPVAGLLSSRDFLGGLAFRVFHCTQYIRHGSKPMYTPEPD 179
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 72/91 (79%), Positives = 78/91 (85%), Gaps = 3/91 (3%)
Query: 528 VPRLASLSP---DSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDV 584
+P+L +S TGF LRPVAGLLSSRDFL GLAFRVFH TQYIRH SKP+YTPEPD+
Sbjct: 121 IPQLEDVSQFLQTCTGFRLRPVAGLLSSRDFLGGLAFRVFHCTQYIRHGSKPMYTPEPDI 180
Query: 585 CHELLGHVPLFADPSFAQFSQEIGLASLGAP 615
CHELLGHVPLF+D SFAQFSQEIGLASLGAP
Sbjct: 181 CHELLGHVPLFSDRSFAQFSQEIGLASLGAP 211
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 40/47 (85%), Positives = 45/47 (95%)
Query: 163 TIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKH 209
TI+ELDRFANQILSYG+ELDADHPGF DPVYRARRK FAD+A+NY+H
Sbjct: 21 TIQELDRFANQILSYGAELDADHPGFKDPVYRARRKQFADIAYNYRH 67
>pdb|1J8T|A Chain A, Catalytic Domain Of Human Phenylalanine Hydroxylase Fe(Ii)
pdb|1J8U|A Chain A, Catalytic Domain Of Human Phenylalanine Hydroxylase Fe(ii)
In Complex With Tetrahydrobiopterin
pdb|1LRM|A Chain A, Crystal Structure Of Binary Complex Of The Catalytic
Domain Of Human Phenylalanine Hydroxylase With
Dihydrobiopterin (Bh2)
pdb|1KW0|A Chain A, Catalytic Domain Of Human Phenylalanine Hydroxylase
(Fe(Ii) ) In Complex With Tetrahydrobiopterin And
Thienylalanine
pdb|1MMK|A Chain A, Crystal Structure Of Ternary Complex Of The Catalytic
Domain Of Human Phenylalanine Hydroxylase ((Feii))
Complexed With Tetrahydrobiopterin And Thienylalanine
pdb|1MMT|A Chain A, Crystal Structure Of Ternary Complex Of The Catalytic
Domain Of Human Phenylalanine Hydroxylase (Fe(Ii))
Complexed With Tetrahydrobiopterin And Norleucine
Length = 325
Score = 295 bits (755), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 153/250 (61%), Positives = 178/250 (71%), Gaps = 33/250 (13%)
Query: 331 INIISRNHNQFHGVPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADL 390
++ +SR+ + VPWFPR I+ELDRFANQILSYG+ELDADHPGF DPVYRARRK FAD+
Sbjct: 4 VHELSRDKKK-DTVPWFPRTIQELDRFANQILSYGAELDADHPGFKDPVYRARRKQFADI 62
Query: 391 AFNYKHS-----ILLMP-----------------------EHNHVFPLLIQNCGYAEDNI 422
A+NY+H + M E+NH+FPLL + CG+ EDNI
Sbjct: 63 AYNYRHGQPIPRVEYMEEEKKTWGTVFKTLKSLYKTHACYEYNHIFPLLEKYCGFHEDNI 122
Query: 423 PQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVC 482
PQLED+S+FL+ TGF LRPVAGLLSSRDFL GLAFRVFH TQYIRH SKP+YTPEPD+C
Sbjct: 123 PQLEDVSQFLQTCTGFRLRPVAGLLSSRDFLGGLAFRVFHCTQYIRHGSKPMYTPEPDIC 182
Query: 483 HELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTGFS 542
HELLGHVPLF+D SFAQFSQEIGLASLGAPDEY+E+LAT F + L +
Sbjct: 183 HELLGHVPLFSDRSFAQFSQEIGLASLGAPDEYIEKLATIYWFTVEFGLCKQGDSIKAYG 242
Query: 543 LRPVAGLLSS 552
AGLLSS
Sbjct: 243 ----AGLLSS 248
Score = 182 bits (463), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 82/112 (73%), Positives = 94/112 (83%)
Query: 1 GEPLPRVDYTAEETKTWGEVFRNLTKLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDI 60
G+P+PRV+Y EE KTWG VF+ L LY THAC E+NH+FPLL + CG+ EDNIPQLED+
Sbjct: 69 GQPIPRVEYMEEEKKTWGTVFKTLKSLYKTHACYEYNHIFPLLEKYCGFHEDNIPQLEDV 128
Query: 61 SKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPD 112
S+FL+ TGF LRPVAGLLSSRDFL GLAFRVFH TQYIRH SKP+YTPEPD
Sbjct: 129 SQFLQTCTGFRLRPVAGLLSSRDFLGGLAFRVFHCTQYIRHGSKPMYTPEPD 180
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 72/91 (79%), Positives = 78/91 (85%), Gaps = 3/91 (3%)
Query: 528 VPRLASLSP---DSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDV 584
+P+L +S TGF LRPVAGLLSSRDFL GLAFRVFH TQYIRH SKP+YTPEPD+
Sbjct: 122 IPQLEDVSQFLQTCTGFRLRPVAGLLSSRDFLGGLAFRVFHCTQYIRHGSKPMYTPEPDI 181
Query: 585 CHELLGHVPLFADPSFAQFSQEIGLASLGAP 615
CHELLGHVPLF+D SFAQFSQEIGLASLGAP
Sbjct: 182 CHELLGHVPLFSDRSFAQFSQEIGLASLGAP 212
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 40/47 (85%), Positives = 45/47 (95%)
Query: 163 TIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKH 209
TI+ELDRFANQILSYG+ELDADHPGF DPVYRARRK FAD+A+NY+H
Sbjct: 22 TIQELDRFANQILSYGAELDADHPGFKDPVYRARRKQFADIAYNYRH 68
>pdb|2PAH|A Chain A, Tetrameric Human Phenylalanine Hydroxylase
pdb|2PAH|B Chain B, Tetrameric Human Phenylalanine Hydroxylase
Length = 335
Score = 295 bits (755), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 151/237 (63%), Positives = 171/237 (72%), Gaps = 32/237 (13%)
Query: 344 VPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHS-----I 398
VPWFPR I+ELDRFANQILSYG+ELDADHPGF DPVYRARRK FAD+A+NY+H +
Sbjct: 1 VPWFPRTIQELDRFANQILSYGAELDADHPGFKDPVYRARRKQFADIAYNYRHGQPIPRV 60
Query: 399 LLMP-----------------------EHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDS 435
M E+NH+FPLL + CG+ EDNIPQLED+S+FL+
Sbjct: 61 EYMEEEKKTWGTVFKTLKSLYKTHACYEYNHIFPLLEKYCGFHEDNIPQLEDVSQFLQTC 120
Query: 436 TGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADP 495
TGF LRPVAGLLSSRDFL GLAFRVFH TQYIRH SKP+YTPEPD+CHELLGHVPLF+D
Sbjct: 121 TGFRLRPVAGLLSSRDFLGGLAFRVFHCTQYIRHGSKPMYTPEPDICHELLGHVPLFSDR 180
Query: 496 SFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTGFSLRPVAGLLSS 552
SFAQFSQEIGLASLGAPDEY+E+LAT F + L + AGLLSS
Sbjct: 181 SFAQFSQEIGLASLGAPDEYIEKLATIYWFTVEFGLCKQGDSIKAYG----AGLLSS 233
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 82/112 (73%), Positives = 94/112 (83%)
Query: 1 GEPLPRVDYTAEETKTWGEVFRNLTKLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDI 60
G+P+PRV+Y EE KTWG VF+ L LY THAC E+NH+FPLL + CG+ EDNIPQLED+
Sbjct: 54 GQPIPRVEYMEEEKKTWGTVFKTLKSLYKTHACYEYNHIFPLLEKYCGFHEDNIPQLEDV 113
Query: 61 SKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPD 112
S+FL+ TGF LRPVAGLLSSRDFL GLAFRVFH TQYIRH SKP+YTPEPD
Sbjct: 114 SQFLQTCTGFRLRPVAGLLSSRDFLGGLAFRVFHCTQYIRHGSKPMYTPEPD 165
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 72/91 (79%), Positives = 78/91 (85%), Gaps = 3/91 (3%)
Query: 528 VPRLASLSP---DSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDV 584
+P+L +S TGF LRPVAGLLSSRDFL GLAFRVFH TQYIRH SKP+YTPEPD+
Sbjct: 107 IPQLEDVSQFLQTCTGFRLRPVAGLLSSRDFLGGLAFRVFHCTQYIRHGSKPMYTPEPDI 166
Query: 585 CHELLGHVPLFADPSFAQFSQEIGLASLGAP 615
CHELLGHVPLF+D SFAQFSQEIGLASLGAP
Sbjct: 167 CHELLGHVPLFSDRSFAQFSQEIGLASLGAP 197
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 40/47 (85%), Positives = 45/47 (95%)
Query: 163 TIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKH 209
TI+ELDRFANQILSYG+ELDADHPGF DPVYRARRK FAD+A+NY+H
Sbjct: 7 TIQELDRFANQILSYGAELDADHPGFKDPVYRARRKQFADIAYNYRH 53
>pdb|1DMW|A Chain A, Crystal Structure Of Double Truncated Human Phenylalanine
Hydroxylase With Bound 7,8-Dihydro-L-Biopterin
Length = 307
Score = 294 bits (753), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 151/237 (63%), Positives = 171/237 (72%), Gaps = 32/237 (13%)
Query: 344 VPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHS-----I 398
VPWFPR I+ELDRFANQILSYG+ELDADHPGF DPVYRARRK FAD+A+NY+H +
Sbjct: 1 VPWFPRTIQELDRFANQILSYGAELDADHPGFKDPVYRARRKQFADIAYNYRHGQPIPRV 60
Query: 399 LLMP-----------------------EHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDS 435
M E+NH+FPLL + CG+ EDNIPQLED+S+FL+
Sbjct: 61 EYMEEEKKTWGTVFKTLKSLYKTHACYEYNHIFPLLEKYCGFHEDNIPQLEDVSQFLQTC 120
Query: 436 TGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADP 495
TGF LRPVAGLLSSRDFL GLAFRVFH TQYIRH SKP+YTPEPD+CHELLGHVPLF+D
Sbjct: 121 TGFRLRPVAGLLSSRDFLGGLAFRVFHCTQYIRHGSKPMYTPEPDICHELLGHVPLFSDR 180
Query: 496 SFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTGFSLRPVAGLLSS 552
SFAQFSQEIGLASLGAPDEY+E+LAT F + L + AGLLSS
Sbjct: 181 SFAQFSQEIGLASLGAPDEYIEKLATIYWFTVEFGLCKQGDSIKAYG----AGLLSS 233
Score = 182 bits (463), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 82/112 (73%), Positives = 94/112 (83%)
Query: 1 GEPLPRVDYTAEETKTWGEVFRNLTKLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDI 60
G+P+PRV+Y EE KTWG VF+ L LY THAC E+NH+FPLL + CG+ EDNIPQLED+
Sbjct: 54 GQPIPRVEYMEEEKKTWGTVFKTLKSLYKTHACYEYNHIFPLLEKYCGFHEDNIPQLEDV 113
Query: 61 SKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPD 112
S+FL+ TGF LRPVAGLLSSRDFL GLAFRVFH TQYIRH SKP+YTPEPD
Sbjct: 114 SQFLQTCTGFRLRPVAGLLSSRDFLGGLAFRVFHCTQYIRHGSKPMYTPEPD 165
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/91 (79%), Positives = 78/91 (85%), Gaps = 3/91 (3%)
Query: 528 VPRLASLSP---DSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDV 584
+P+L +S TGF LRPVAGLLSSRDFL GLAFRVFH TQYIRH SKP+YTPEPD+
Sbjct: 107 IPQLEDVSQFLQTCTGFRLRPVAGLLSSRDFLGGLAFRVFHCTQYIRHGSKPMYTPEPDI 166
Query: 585 CHELLGHVPLFADPSFAQFSQEIGLASLGAP 615
CHELLGHVPLF+D SFAQFSQEIGLASLGAP
Sbjct: 167 CHELLGHVPLFSDRSFAQFSQEIGLASLGAP 197
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 40/47 (85%), Positives = 45/47 (95%)
Query: 163 TIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKH 209
TI+ELDRFANQILSYG+ELDADHPGF DPVYRARRK FAD+A+NY+H
Sbjct: 7 TIQELDRFANQILSYGAELDADHPGFKDPVYRARRKQFADIAYNYRH 53
>pdb|1PAH|A Chain A, Human Phenylalanine Hydroxylase Dimer, Residues 117-424
pdb|3PAH|A Chain A, Human Phenylalanine Hydroxylase Catalytic Domain Dimer
With Bound Adrenaline Inhibitor
pdb|4PAH|A Chain A, Human Phenylalanine Hydroxylase Catalytic Domain Dimer
With Bound Nor- Adrenaline Inhibitor
pdb|5PAH|A Chain A, Human Phenylalanine Hydroxylase Catalytic Domain Dimer
With Bound Dopamine Inhibitor
pdb|6PAH|A Chain A, Human Phenylalanine Hydroxylase Catalytic Domain Dimer
With Bound L- Dopa (3,4-Dihydroxyphenylalanine)
Inhibitor
Length = 308
Score = 294 bits (753), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 151/237 (63%), Positives = 171/237 (72%), Gaps = 32/237 (13%)
Query: 344 VPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHS-----I 398
VPWFPR I+ELDRFANQILSYG+ELDADHPGF DPVYRARRK FAD+A+NY+H +
Sbjct: 2 VPWFPRTIQELDRFANQILSYGAELDADHPGFKDPVYRARRKQFADIAYNYRHGQPIPRV 61
Query: 399 LLMP-----------------------EHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDS 435
M E+NH+FPLL + CG+ EDNIPQLED+S+FL+
Sbjct: 62 EYMEEEKKTWGTVFKTLKSLYKTHACYEYNHIFPLLEKYCGFHEDNIPQLEDVSQFLQTC 121
Query: 436 TGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADP 495
TGF LRPVAGLLSSRDFL GLAFRVFH TQYIRH SKP+YTPEPD+CHELLGHVPLF+D
Sbjct: 122 TGFRLRPVAGLLSSRDFLGGLAFRVFHCTQYIRHGSKPMYTPEPDICHELLGHVPLFSDR 181
Query: 496 SFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTGFSLRPVAGLLSS 552
SFAQFSQEIGLASLGAPDEY+E+LAT F + L + AGLLSS
Sbjct: 182 SFAQFSQEIGLASLGAPDEYIEKLATIYWFTVEFGLCKQGDSIKAYG----AGLLSS 234
Score = 182 bits (463), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 82/112 (73%), Positives = 94/112 (83%)
Query: 1 GEPLPRVDYTAEETKTWGEVFRNLTKLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDI 60
G+P+PRV+Y EE KTWG VF+ L LY THAC E+NH+FPLL + CG+ EDNIPQLED+
Sbjct: 55 GQPIPRVEYMEEEKKTWGTVFKTLKSLYKTHACYEYNHIFPLLEKYCGFHEDNIPQLEDV 114
Query: 61 SKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPD 112
S+FL+ TGF LRPVAGLLSSRDFL GLAFRVFH TQYIRH SKP+YTPEPD
Sbjct: 115 SQFLQTCTGFRLRPVAGLLSSRDFLGGLAFRVFHCTQYIRHGSKPMYTPEPD 166
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 72/91 (79%), Positives = 78/91 (85%), Gaps = 3/91 (3%)
Query: 528 VPRLASLSP---DSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDV 584
+P+L +S TGF LRPVAGLLSSRDFL GLAFRVFH TQYIRH SKP+YTPEPD+
Sbjct: 108 IPQLEDVSQFLQTCTGFRLRPVAGLLSSRDFLGGLAFRVFHCTQYIRHGSKPMYTPEPDI 167
Query: 585 CHELLGHVPLFADPSFAQFSQEIGLASLGAP 615
CHELLGHVPLF+D SFAQFSQEIGLASLGAP
Sbjct: 168 CHELLGHVPLFSDRSFAQFSQEIGLASLGAP 198
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 40/47 (85%), Positives = 45/47 (95%)
Query: 163 TIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKH 209
TI+ELDRFANQILSYG+ELDADHPGF DPVYRARRK FAD+A+NY+H
Sbjct: 8 TIQELDRFANQILSYGAELDADHPGFKDPVYRARRKQFADIAYNYRH 54
>pdb|1TDW|A Chain A, Crystal Structure Of Double Truncated Human Phenylalanine
Hydroxylase Bh4-Responsive Pku Mutant A313t.
pdb|1TG2|A Chain A, Crystal Structure Of Phenylalanine Hydroxylase A313t
Mutant With 7,8-Dihydrobiopterin Bound
Length = 308
Score = 293 bits (749), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 150/237 (63%), Positives = 170/237 (71%), Gaps = 32/237 (13%)
Query: 344 VPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHS-----I 398
VPWFPR I+ELDRFANQILSYG+ELDADHPGF DPVYRARRK FAD+A+NY+H +
Sbjct: 2 VPWFPRTIQELDRFANQILSYGAELDADHPGFKDPVYRARRKQFADIAYNYRHGQPIPRV 61
Query: 399 LLMP-----------------------EHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDS 435
M E+NH+FPLL + CG+ EDNIPQLED+S+FL+
Sbjct: 62 EYMEEEKKTWGTVFKTLKSLYKTHACYEYNHIFPLLEKYCGFHEDNIPQLEDVSQFLQTC 121
Query: 436 TGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADP 495
TGF LRPVAGLLSSRDFL GLAFRVFH TQYIRH SKP+YTPEPD+CHELLGHVPLF+D
Sbjct: 122 TGFRLRPVAGLLSSRDFLGGLAFRVFHCTQYIRHGSKPMYTPEPDICHELLGHVPLFSDR 181
Query: 496 SFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTGFSLRPVAGLLSS 552
SFAQFSQEIGLASLG PDEY+E+LAT F + L + AGLLSS
Sbjct: 182 SFAQFSQEIGLASLGTPDEYIEKLATIYWFTVEFGLCKQGDSIKAYG----AGLLSS 234
Score = 182 bits (463), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 82/112 (73%), Positives = 94/112 (83%)
Query: 1 GEPLPRVDYTAEETKTWGEVFRNLTKLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDI 60
G+P+PRV+Y EE KTWG VF+ L LY THAC E+NH+FPLL + CG+ EDNIPQLED+
Sbjct: 55 GQPIPRVEYMEEEKKTWGTVFKTLKSLYKTHACYEYNHIFPLLEKYCGFHEDNIPQLEDV 114
Query: 61 SKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPD 112
S+FL+ TGF LRPVAGLLSSRDFL GLAFRVFH TQYIRH SKP+YTPEPD
Sbjct: 115 SQFLQTCTGFRLRPVAGLLSSRDFLGGLAFRVFHCTQYIRHGSKPMYTPEPD 166
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 71/91 (78%), Positives = 77/91 (84%), Gaps = 3/91 (3%)
Query: 528 VPRLASLSP---DSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDV 584
+P+L +S TGF LRPVAGLLSSRDFL GLAFRVFH TQYIRH SKP+YTPEPD+
Sbjct: 108 IPQLEDVSQFLQTCTGFRLRPVAGLLSSRDFLGGLAFRVFHCTQYIRHGSKPMYTPEPDI 167
Query: 585 CHELLGHVPLFADPSFAQFSQEIGLASLGAP 615
CHELLGHVPLF+D SFAQFSQEIGLASLG P
Sbjct: 168 CHELLGHVPLFSDRSFAQFSQEIGLASLGTP 198
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 40/47 (85%), Positives = 45/47 (95%)
Query: 163 TIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKH 209
TI+ELDRFANQILSYG+ELDADHPGF DPVYRARRK FAD+A+NY+H
Sbjct: 8 TIQELDRFANQILSYGAELDADHPGFKDPVYRARRKQFADIAYNYRH 54
>pdb|3E2T|A Chain A, The Catalytic Domain Of Chicken Tryptophan Hydroxylase 1
With Bound Tryptophan
Length = 314
Score = 265 bits (677), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 131/215 (60%), Positives = 151/215 (70%), Gaps = 28/215 (13%)
Query: 341 FHGVPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHSI-- 398
+PW+P++I +LD+ AN++L YGS+LDADHPGF D VYR RRKYFADLA NYKH
Sbjct: 3 MENIPWYPKKISDLDKCANRVLMYGSDLDADHPGFKDNVYRKRRKYFADLAMNYKHGDPI 62
Query: 399 ---------------------LLMPEHN-----HVFPLLIQNCGYAEDNIPQLEDISKFL 432
L P H PLL + CGY EDNIPQLED+S+FL
Sbjct: 63 PEIEFTEEEIKTWGTVYRELNKLYPTHACREYLKNLPLLTKYCGYREDNIPQLEDVSRFL 122
Query: 433 KDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLF 492
K+ TGF++RPVAG LS RDFLAGLAFRVFH TQY+RH S PLYTPEPD CHELLGHVPL
Sbjct: 123 KERTGFTIRPVAGYLSPRDFLAGLAFRVFHCTQYVRHSSDPLYTPEPDTCHELLGHVPLL 182
Query: 493 ADPSFAQFSQEIGLASLGAPDEYVERLATSNNFMI 527
A+PSFAQFSQEIGLASLGA DE V++LAT F +
Sbjct: 183 AEPSFAQFSQEIGLASLGASDEAVQKLATCYFFTV 217
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 79/113 (69%), Positives = 94/113 (83%)
Query: 1 GEPLPRVDYTAEETKTWGEVFRNLTKLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDI 60
G+P+P +++T EE KTWG V+R L KLYPTHAC+E+ PLL + CGY EDNIPQLED+
Sbjct: 59 GDPIPEIEFTEEEIKTWGTVYRELNKLYPTHACREYLKNLPLLTKYCGYREDNIPQLEDV 118
Query: 61 SKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDT 113
S+FLK+ TGF++RPVAG LS RDFLAGLAFRVFH TQY+RH S PLYTPEPDT
Sbjct: 119 SRFLKERTGFTIRPVAGYLSPRDFLAGLAFRVFHCTQYVRHSSDPLYTPEPDT 171
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 34/46 (73%), Positives = 39/46 (84%)
Query: 164 IRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKH 209
I +LD+ AN++L YGS+LDADHPGF D VYR RRKYFADLA NYKH
Sbjct: 13 ISDLDKCANRVLMYGSDLDADHPGFKDNVYRKRRKYFADLAMNYKH 58
>pdb|1MLW|A Chain A, Crystal Structure Of Human Tryptophan Hydroxylase With
Bound 7,8-Dihydro-L-Biopterin Cofactor And Fe(Iii)
Length = 301
Score = 261 bits (668), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 140/237 (59%), Positives = 156/237 (65%), Gaps = 32/237 (13%)
Query: 344 VPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHSI----- 398
VPWFP++I +LD AN++L YGSELDADHPGF D VYR RRKYFADLA NYKH
Sbjct: 4 VPWFPKKISDLDHCANRVLMYGSELDADHPGFKDNVYRKRRKYFADLAMNYKHGDPIPKV 63
Query: 399 ------------------LLMPEHN-----HVFPLLIQNCGYAEDNIPQLEDISKFLKDS 435
L P H PLL + CGY EDNIPQLED+S FLK+
Sbjct: 64 EFTEEEIKTWGTVFRELNKLYPTHACREYLKNLPLLSKYCGYREDNIPQLEDVSNFLKER 123
Query: 436 TGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADP 495
TGFS+RPVAG LS RDFL+GLAFRVFH TQY+RH S P YTPEPD CHELLGHVPL A+P
Sbjct: 124 TGFSIRPVAGYLSPRDFLSGLAFRVFHCTQYVRHSSDPFYTPEPDTCHELLGHVPLLAEP 183
Query: 496 SFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTGFSLRPVAGLLSS 552
SFAQFSQEIGLASLGA +E V++LAT F + L F AGLLSS
Sbjct: 184 SFAQFSQEIGLASLGASEEAVQKLATCYFFTVEFGLCKQDGQLRVFG----AGLLSS 236
Score = 178 bits (452), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 80/113 (70%), Positives = 93/113 (82%)
Query: 1 GEPLPRVDYTAEETKTWGEVFRNLTKLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDI 60
G+P+P+V++T EE KTWG VFR L KLYPTHAC+E+ PLL + CGY EDNIPQLED+
Sbjct: 57 GDPIPKVEFTEEEIKTWGTVFRELNKLYPTHACREYLKNLPLLSKYCGYREDNIPQLEDV 116
Query: 61 SKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDT 113
S FLK+ TGFS+RPVAG LS RDFL+GLAFRVFH TQY+RH S P YTPEPDT
Sbjct: 117 SNFLKERTGFSIRPVAGYLSPRDFLSGLAFRVFHCTQYVRHSSDPFYTPEPDT 169
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 38/46 (82%)
Query: 164 IRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKH 209
I +LD AN++L YGSELDADHPGF D VYR RRKYFADLA NYKH
Sbjct: 11 ISDLDHCANRVLMYGSELDADHPGFKDNVYRKRRKYFADLAMNYKH 56
>pdb|3HF6|A Chain A, Crystal Structure Of Human Tryptophan Hydroxylase Type 1
With Bound Lp-521834 And Fe
pdb|3HF8|A Chain A, Crystal Structure Of Human Tryoptophan Hydroxylase Type 1
With Bound Lp-533401 And Fe
pdb|3HFB|A Chain A, Crystal Structure Of Human Tryoptophan Hydroxylase Type 1
With Lp- 534193
Length = 290
Score = 261 bits (667), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 140/237 (59%), Positives = 156/237 (65%), Gaps = 32/237 (13%)
Query: 344 VPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHSI----- 398
VPWFP++I +LD AN++L YGSELDADHPGF D VYR RRKYFADLA NYKH
Sbjct: 2 VPWFPKKISDLDHCANRVLMYGSELDADHPGFKDNVYRKRRKYFADLAMNYKHGDPIPKV 61
Query: 399 ------------------LLMPEHN-----HVFPLLIQNCGYAEDNIPQLEDISKFLKDS 435
L P H PLL + CGY EDNIPQLED+S FLK+
Sbjct: 62 EFTEEEIKTWGTVFRELNKLYPTHACREYLKNLPLLSKYCGYREDNIPQLEDVSNFLKER 121
Query: 436 TGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADP 495
TGFS+RPVAG LS RDFL+GLAFRVFH TQY+RH S P YTPEPD CHELLGHVPL A+P
Sbjct: 122 TGFSIRPVAGYLSPRDFLSGLAFRVFHCTQYVRHSSDPFYTPEPDTCHELLGHVPLLAEP 181
Query: 496 SFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTGFSLRPVAGLLSS 552
SFAQFSQEIGLASLGA +E V++LAT F + L F AGLLSS
Sbjct: 182 SFAQFSQEIGLASLGASEEAVQKLATCYFFTVEFGLCKQDGQLRVFG----AGLLSS 234
Score = 178 bits (452), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 80/113 (70%), Positives = 93/113 (82%)
Query: 1 GEPLPRVDYTAEETKTWGEVFRNLTKLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDI 60
G+P+P+V++T EE KTWG VFR L KLYPTHAC+E+ PLL + CGY EDNIPQLED+
Sbjct: 55 GDPIPKVEFTEEEIKTWGTVFRELNKLYPTHACREYLKNLPLLSKYCGYREDNIPQLEDV 114
Query: 61 SKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDT 113
S FLK+ TGFS+RPVAG LS RDFL+GLAFRVFH TQY+RH S P YTPEPDT
Sbjct: 115 SNFLKERTGFSIRPVAGYLSPRDFLSGLAFRVFHCTQYVRHSSDPFYTPEPDT 167
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 38/46 (82%)
Query: 164 IRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKH 209
I +LD AN++L YGSELDADHPGF D VYR RRKYFADLA NYKH
Sbjct: 9 ISDLDHCANRVLMYGSELDADHPGFKDNVYRKRRKYFADLAMNYKH 54
>pdb|1TOH|A Chain A, Tyrosine Hydroxylase Catalytic And Tetramerization Domains
From Rat
Length = 343
Score = 234 bits (597), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 122/237 (51%), Positives = 152/237 (64%), Gaps = 32/237 (13%)
Query: 344 VPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKH------- 396
VPWFPR++ ELD+ + + + +LD DHPGF+D VYR RRK A++AF YKH
Sbjct: 9 VPWFPRKVSELDKCHHLVTKFDPDLDLDHPGFSDQVYRQRRKLIAEIAFQYKHGEPIPHV 68
Query: 397 ---------------------SILLMPEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDS 435
+ EH F LL + CGY ED+IPQLED+S+FLK+
Sbjct: 69 EYTAEEIATWKEVYVTLKGLYATHACREHLEGFQLLERYCGYREDSIPQLEDVSRFLKER 128
Query: 436 TGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADP 495
TGF LRPVAGLLS+RDFLA LAFRVF TQYIRH S P+++PEPD CHELLGHVP+ AD
Sbjct: 129 TGFQLRPVAGLLSARDFLASLAFRVFQCTQYIRHASSPMHSPEPDCCHELLGHVPMLADR 188
Query: 496 SFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTGFSLRPVAGLLSS 552
+FAQFSQ+IGLASLGA DE +E+L+T F + L + + + AGLLSS
Sbjct: 189 TFAQFSQDIGLASLGASDEEIEKLSTVYWFTVEFGLCKQNGELKAYG----AGLLSS 241
Score = 166 bits (419), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 91/176 (51%), Positives = 112/176 (63%), Gaps = 21/176 (11%)
Query: 1 GEPLPRVDYTAEETKTWGEVFRNLTKLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDI 60
GEP+P V+YTAEE TW EV+ L LY THAC+EH F LL + CGY ED+IPQLED+
Sbjct: 62 GEPIPHVEYTAEEIATWKEVYVTLKGLYATHACREHLEGFQLLERYCGYREDSIPQLEDV 121
Query: 61 SKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLF-IIG- 118
S+FLK+ TGF LRPVAGLLS+RDFLA LAFRVF TQYIRH S P+++PEPD ++G
Sbjct: 122 SRFLKERTGFQLRPVAGLLSARDFLASLAFRVFQCTQYIRHASSPMHSPEPDCCHELLGH 181
Query: 119 ----ANR-------GNGLAAI--------QVGKAYGLTVFASVGCPVGVAKAYGLG 155
A+R GLA++ ++ Y TV + G KAYG G
Sbjct: 182 VPMLADRTFAQFSQDIGLASLGASDEEIEKLSTVYWFTVEFGLCKQNGELKAYGAG 237
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 63/90 (70%), Positives = 74/90 (82%), Gaps = 3/90 (3%)
Query: 528 VPRLASLS---PDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDV 584
+P+L +S + TGF LRPVAGLLS+RDFLA LAFRVF TQYIRH S P+++PEPD
Sbjct: 115 IPQLEDVSRFLKERTGFQLRPVAGLLSARDFLASLAFRVFQCTQYIRHASSPMHSPEPDC 174
Query: 585 CHELLGHVPLFADPSFAQFSQEIGLASLGA 614
CHELLGHVP+ AD +FAQFSQ+IGLASLGA
Sbjct: 175 CHELLGHVPMLADRTFAQFSQDIGLASLGA 204
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 164 IRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKH 209
+ ELD+ + + + +LD DHPGF+D VYR RRK A++AF YKH
Sbjct: 16 VSELDKCHHLVTKFDPDLDLDHPGFSDQVYRQRRKLIAEIAFQYKH 61
>pdb|2XSN|A Chain A, Crystal Structure Of Human Tyrosine Hydroxylase Catalytic
Domain
pdb|2XSN|B Chain B, Crystal Structure Of Human Tyrosine Hydroxylase Catalytic
Domain
pdb|2XSN|C Chain C, Crystal Structure Of Human Tyrosine Hydroxylase Catalytic
Domain
pdb|2XSN|D Chain D, Crystal Structure Of Human Tyrosine Hydroxylase Catalytic
Domain
Length = 343
Score = 232 bits (592), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 121/237 (51%), Positives = 151/237 (63%), Gaps = 32/237 (13%)
Query: 344 VPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKH------- 396
VPWFPR++ ELD+ + + + +LD DHPGF+D VYR RRK A++AF Y+H
Sbjct: 2 VPWFPRKVSELDKCHHLVTKFDPDLDLDHPGFSDQVYRQRRKLIAEIAFQYRHGDPIPRV 61
Query: 397 ---------------------SILLMPEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDS 435
+ EH F LL + GY EDNIPQLED+S+FLK+
Sbjct: 62 EYTAEEIATWKEVYTTLKGLYATHACGEHLEAFALLERFSGYREDNIPQLEDVSRFLKER 121
Query: 436 TGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADP 495
TGF LRPVAGLLS+RDFLA LAFRVF TQYIRH S P+++PEPD CHELLGHVP+ AD
Sbjct: 122 TGFQLRPVAGLLSARDFLASLAFRVFQCTQYIRHASSPMHSPEPDCCHELLGHVPMLADR 181
Query: 496 SFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTGFSLRPVAGLLSS 552
+FAQFSQ+IGLASLGA DE +E+L+T F + L + + + AGLLSS
Sbjct: 182 TFAQFSQDIGLASLGASDEEIEKLSTLYWFTVEFGLCKQNGEVKAYG----AGLLSS 234
Score = 165 bits (418), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 91/176 (51%), Positives = 111/176 (63%), Gaps = 21/176 (11%)
Query: 1 GEPLPRVDYTAEETKTWGEVFRNLTKLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDI 60
G+P+PRV+YTAEE TW EV+ L LY THAC EH F LL + GY EDNIPQLED+
Sbjct: 55 GDPIPRVEYTAEEIATWKEVYTTLKGLYATHACGEHLEAFALLERFSGYREDNIPQLEDV 114
Query: 61 SKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLF-IIG- 118
S+FLK+ TGF LRPVAGLLS+RDFLA LAFRVF TQYIRH S P+++PEPD ++G
Sbjct: 115 SRFLKERTGFQLRPVAGLLSARDFLASLAFRVFQCTQYIRHASSPMHSPEPDCCHELLGH 174
Query: 119 ----ANR-------GNGLAAI--------QVGKAYGLTVFASVGCPVGVAKAYGLG 155
A+R GLA++ ++ Y TV + G KAYG G
Sbjct: 175 VPMLADRTFAQFSQDIGLASLGASDEEIEKLSTLYWFTVEFGLCKQNGEVKAYGAG 230
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/118 (59%), Positives = 84/118 (71%), Gaps = 8/118 (6%)
Query: 505 GLASLGAPDEYVERLATSNNFM-----IVPRLASLS---PDSTGFSLRPVAGLLSSRDFL 556
GL + A E++E A F +P+L +S + TGF LRPVAGLLS+RDFL
Sbjct: 80 GLYATHACGEHLEAFALLERFSGYREDNIPQLEDVSRFLKERTGFQLRPVAGLLSARDFL 139
Query: 557 AGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGA 614
A LAFRVF TQYIRH S P+++PEPD CHELLGHVP+ AD +FAQFSQ+IGLASLGA
Sbjct: 140 ASLAFRVFQCTQYIRHASSPMHSPEPDCCHELLGHVPMLADRTFAQFSQDIGLASLGA 197
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 32/46 (69%)
Query: 164 IRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKH 209
+ ELD+ + + + +LD DHPGF+D VYR RRK A++AF Y+H
Sbjct: 9 VSELDKCHHLVTKFDPDLDLDHPGFSDQVYRQRRKLIAEIAFQYRH 54
>pdb|2TOH|A Chain A, Tyrosine Hydroxylase Catalytic And Tetramerization Domains
From Rat
Length = 343
Score = 231 bits (590), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 121/237 (51%), Positives = 151/237 (63%), Gaps = 32/237 (13%)
Query: 344 VPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKH------- 396
VPWFPR++ ELD+ + + + +LD DHPGF+D VYR RRK A++AF YKH
Sbjct: 9 VPWFPRKVSELDKCHHLVTKFDPDLDLDHPGFSDQVYRQRRKLIAEIAFQYKHGEPIPHV 68
Query: 397 ---------------------SILLMPEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDS 435
+ EH F LL + CGY ED+IPQLED+S+FLK+
Sbjct: 69 EYTAEEIATWKEVYVTLKGLYATHACREHLEGFQLLERYCGYREDSIPQLEDVSRFLKER 128
Query: 436 TGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADP 495
TGF LRPVAGLLS+RD LA LAFRVF TQYIRH S P+++PEPD CHELLGHVP+ AD
Sbjct: 129 TGFQLRPVAGLLSARDXLASLAFRVFQCTQYIRHASSPMHSPEPDCCHELLGHVPMLADR 188
Query: 496 SFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTGFSLRPVAGLLSS 552
+FAQFSQ+IGLASLGA DE +E+L+T F + L + + + AGLLSS
Sbjct: 189 TFAQFSQDIGLASLGASDEEIEKLSTVYWFTVEFGLCKQNGELKAYG----AGLLSS 241
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 90/176 (51%), Positives = 111/176 (63%), Gaps = 21/176 (11%)
Query: 1 GEPLPRVDYTAEETKTWGEVFRNLTKLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDI 60
GEP+P V+YTAEE TW EV+ L LY THAC+EH F LL + CGY ED+IPQLED+
Sbjct: 62 GEPIPHVEYTAEEIATWKEVYVTLKGLYATHACREHLEGFQLLERYCGYREDSIPQLEDV 121
Query: 61 SKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLF-IIG- 118
S+FLK+ TGF LRPVAGLLS+RD LA LAFRVF TQYIRH S P+++PEPD ++G
Sbjct: 122 SRFLKERTGFQLRPVAGLLSARDXLASLAFRVFQCTQYIRHASSPMHSPEPDCCHELLGH 181
Query: 119 ----ANR-------GNGLAAI--------QVGKAYGLTVFASVGCPVGVAKAYGLG 155
A+R GLA++ ++ Y TV + G KAYG G
Sbjct: 182 VPMLADRTFAQFSQDIGLASLGASDEEIEKLSTVYWFTVEFGLCKQNGELKAYGAG 237
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 62/90 (68%), Positives = 73/90 (81%), Gaps = 3/90 (3%)
Query: 528 VPRLASLS---PDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDV 584
+P+L +S + TGF LRPVAGLLS+RD LA LAFRVF TQYIRH S P+++PEPD
Sbjct: 115 IPQLEDVSRFLKERTGFQLRPVAGLLSARDXLASLAFRVFQCTQYIRHASSPMHSPEPDC 174
Query: 585 CHELLGHVPLFADPSFAQFSQEIGLASLGA 614
CHELLGHVP+ AD +FAQFSQ+IGLASLGA
Sbjct: 175 CHELLGHVPMLADRTFAQFSQDIGLASLGA 204
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 164 IRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKH 209
+ ELD+ + + + +LD DHPGF+D VYR RRK A++AF YKH
Sbjct: 16 VSELDKCHHLVTKFDPDLDLDHPGFSDQVYRQRRKLIAEIAFQYKH 61
>pdb|2V28|A Chain A, Apo Structure Of The Cold Active Phenylalanine Hydroxylase
From Colwellia Psychrerythraea 34h
pdb|2V28|B Chain B, Apo Structure Of The Cold Active Phenylalanine Hydroxylase
From Colwellia Psychrerythraea 34h
Length = 267
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 53/95 (55%)
Query: 420 DNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEP 479
D IPQL+++SK LK STG+ PV L+ +F L+ + F +IR + Y EP
Sbjct: 59 DRIPQLDEVSKVLKVSTGWECYPVPALIGFGEFFRLLSEKKFPVATFIRSREEMDYLQEP 118
Query: 480 DVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDE 514
D+ HE+ GH PL + SFA +++ G L A E
Sbjct: 119 DIFHEIFGHCPLLTNSSFANYTEAYGKMGLNATKE 153
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 59/119 (49%), Gaps = 4/119 (3%)
Query: 500 FSQEIGLASLGAPDEYVERLATSN-NFMIVPRLASLSPD---STGFSLRPVAGLLSSRDF 555
F+++I A DEY E LA N +P+L +S STG+ PV L+ +F
Sbjct: 32 FTRQIACIKDKACDEYHEGLAKLNLPTDRIPQLDEVSKVLKVSTGWECYPVPALIGFGEF 91
Query: 556 LAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGA 614
L+ + F +IR + Y EPD+ HE+ GH PL + SFA +++ G L A
Sbjct: 92 FRLLSEKKFPVATFIRSREEMDYLQEPDIFHEIFGHCPLLTNSSFANYTEAYGKMGLNA 150
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
Query: 7 VDYTAEETKTWGEVFRNLTKLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKD 66
++++ EE W E+F AC E++ L D IPQL+++SK LK
Sbjct: 18 IEWSTEENLIWQELFTRQIACIKDKACDEYHEGLAKL----NLPTDRIPQLDEVSKVLKV 73
Query: 67 STGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPD 112
STG+ PV L+ +F L+ + F +IR + Y EPD
Sbjct: 74 STGWECYPVPALIGFGEFFRLLSEKKFPVATFIRSREEMDYLQEPD 119
>pdb|2V27|A Chain A, Structure Of The Cold Active Phenylalanine Hydroxylase
From Colwellia Psychrerythraea 34h
pdb|2V27|B Chain B, Structure Of The Cold Active Phenylalanine Hydroxylase
From Colwellia Psychrerythraea 34h
Length = 275
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 53/95 (55%)
Query: 420 DNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEP 479
D IPQL+++SK LK STG+ PV L+ +F L+ + F +IR + Y EP
Sbjct: 59 DRIPQLDEVSKVLKVSTGWECYPVPALIGFGEFFRLLSEKKFPVATFIRSREEMDYLQEP 118
Query: 480 DVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDE 514
D+ HE+ GH PL + SFA +++ G L A E
Sbjct: 119 DIFHEIFGHCPLLTNSSFANYTEAYGKMGLNATKE 153
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 59/119 (49%), Gaps = 4/119 (3%)
Query: 500 FSQEIGLASLGAPDEYVERLATSN-NFMIVPRLASLSPD---STGFSLRPVAGLLSSRDF 555
F+++I A DEY E LA N +P+L +S STG+ PV L+ +F
Sbjct: 32 FTRQIACIKDKACDEYHEGLAKLNLPTDRIPQLDEVSKVLKVSTGWECYPVPALIGFGEF 91
Query: 556 LAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGA 614
L+ + F +IR + Y EPD+ HE+ GH PL + SFA +++ G L A
Sbjct: 92 FRLLSEKKFPVATFIRSREEMDYLQEPDIFHEIFGHCPLLTNSSFANYTEAYGKMGLNA 150
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
Query: 7 VDYTAEETKTWGEVFRNLTKLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKD 66
++++ EE W E+F AC E++ L D IPQL+++SK LK
Sbjct: 18 IEWSTEENLIWQELFTRQIACIKDKACDEYHEGLAKL----NLPTDRIPQLDEVSKVLKV 73
Query: 67 STGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPD 112
STG+ PV L+ +F L+ + F +IR + Y EPD
Sbjct: 74 STGWECYPVPALIGFGEFFRLLSEKKFPVATFIRSREEMDYLQEPD 119
>pdb|3TK2|A Chain A, Crystallographic Structure Of Phenylalanine Hydroxylase
From Chromobacterium Violaceum Cocrystallized With
Phenylalanine In A Site Distal To The Active Site
pdb|3TK4|A Chain A, Crystal Structure Of Phenylalanine Hydroxylase From
Chromobacterium Violaceum Bound To Cobalt
Length = 302
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%)
Query: 420 DNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEP 479
D +P +++ L +TG+ + V GL+ F LA R F T ++R P + Y EP
Sbjct: 80 DRVPDFNKLNQKLMAATGWKIVAVPGLIPDDVFFEHLANRRFPVTWWLREPHQLDYLQEP 139
Query: 480 DVCHELLGHVPLFADPSFAQFSQEIGLASLGA 511
DV H+L GHVPL +P FA + + G + A
Sbjct: 140 DVFHDLFGHVPLLINPVFADYLEAYGKGGVKA 171
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 54/109 (49%), Gaps = 11/109 (10%)
Query: 538 STGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFAD 597
+TG+ + V GL+ F LA R F T ++R P + Y EPDV H+L GHVPL +
Sbjct: 95 ATGWKIVAVPGLIPDDVFFEHLANRRFPVTWWLREPHQLDYLQEPDVFHDLFGHVPLLIN 154
Query: 598 PSFAQFSQEIGLASLGAPYLFYYVCHELLGHVPLFADPSFAQFSQEIGL 646
P FA + + G + A + LG +P+ A ++ E GL
Sbjct: 155 PVFADYLEAYGKGGVKA---------KALGALPMLA--RLYWYTVEFGL 192
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 72/176 (40%), Gaps = 28/176 (15%)
Query: 3 PLPRVDYTAEETKTWGEVFRNLTKLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDISK 62
P P Y+AE+ TW +++ KL P AC E F ++ D +P +++
Sbjct: 35 PQPLDRYSAEDHATWATLYQRQCKLLPGRACDE----FMEGLERLEVDADRVPDFNKLNQ 90
Query: 63 FLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTL-------- 114
L +TG+ + V GL+ F LA R F T ++R P + Y EPD
Sbjct: 91 KLMAATGWKIVAVPGLIPDDVFFEHLANRRFPVTWWLREPHQLDYLQEPDVFHDLFGHVP 150
Query: 115 -------------FIIGANRGNGLAAI-QVGKAYGLTV-FASVGCPVGVAKAYGLG 155
+ G + L A+ + + Y TV F + P G+ + YG G
Sbjct: 151 LLINPVFADYLEAYGKGGVKAKALGALPMLARLYWYTVEFGLINTPAGM-RIYGAG 205
>pdb|1LTU|A Chain A, Crystal Structure Of Chromobacterium Violaceum, Apo (No
Iron Bound) Structure
pdb|1LTV|A Chain A, Crystal Structure Of Chromobacterium Violaceum
Phenylalanine Hydroxylase, Structure With Bound Oxidized
Fe(Iii)
pdb|1LTZ|A Chain A, Crystal Structure Of Chromobacterium Violaceum
Phenylalanine Hydroxylase, Structure Has Bound Iron
(iii) And Oxidized Cofactor 7,8-dihydrobiopterin
Length = 297
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%)
Query: 420 DNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEP 479
D +P +++ L +TG+ + V GL+ F LA R F T ++R P + Y EP
Sbjct: 75 DRVPDFNKLNEKLMAATGWKIVAVPGLIPDDVFFEHLANRRFPVTWWLREPHQLDYLQEP 134
Query: 480 DVCHELLGHVPLFADPSFAQFSQEIGLASLGA 511
DV H+L GHVPL +P FA + + G + A
Sbjct: 135 DVFHDLFGHVPLLINPVFADYLEAYGKGGVKA 166
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 54/109 (49%), Gaps = 11/109 (10%)
Query: 538 STGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFAD 597
+TG+ + V GL+ F LA R F T ++R P + Y EPDV H+L GHVPL +
Sbjct: 90 ATGWKIVAVPGLIPDDVFFEHLANRRFPVTWWLREPHQLDYLQEPDVFHDLFGHVPLLIN 149
Query: 598 PSFAQFSQEIGLASLGAPYLFYYVCHELLGHVPLFADPSFAQFSQEIGL 646
P FA + + G + A + LG +P+ A ++ E GL
Sbjct: 150 PVFADYLEAYGKGGVKA---------KALGALPMLA--RLYWYTVEFGL 187
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 74/177 (41%), Gaps = 30/177 (16%)
Query: 2 EPLPRVDYTAEETKTWGEVFRNLTKLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDIS 61
+PL R Y+AE+ TW +++ KL P AC E F ++ D +P ++
Sbjct: 31 QPLDR--YSAEDHATWATLYQRQCKLLPGRACDE----FLEGLERLEVDADRVPDFNKLN 84
Query: 62 KFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFII---- 117
+ L +TG+ + V GL+ F LA R F T ++R P + Y EPD +
Sbjct: 85 EKLMAATGWKIVAVPGLIPDDVFFEHLANRRFPVTWWLREPHQLDYLQEPDVFHDLFGHV 144
Query: 118 -----------------GANRGNGLAAI-QVGKAYGLTV-FASVGCPVGVAKAYGLG 155
G + L A+ + + Y TV F + P G+ + YG G
Sbjct: 145 PLLINPVFADYLEAYGKGGVKAKALGALPMLARLYWYTVEFGLINTPAGM-RIYGAG 200
>pdb|3TCY|A Chain A, Crystallographic Structure Of Phenylalanine Hydroxylase
From Chromobacterium Violaceum (Cpah) Bound To
Phenylalanine In A Site Distal To The Active Site
Length = 302
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%)
Query: 420 DNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEP 479
D +P +++ L +TG+ + V GL+ F LA R F T ++R P + Y EP
Sbjct: 80 DRVPDFNKLNEKLMAATGWKIVAVPGLIPDDVFFEHLANRRFPVTWWLREPHQLDYLQEP 139
Query: 480 DVCHELLGHVPLFADPSFAQFSQEIGLASLGA 511
DV H+L GHVPL +P FA + + G + A
Sbjct: 140 DVFHDLFGHVPLLINPVFADYLEAYGKGGVKA 171
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 54/109 (49%), Gaps = 11/109 (10%)
Query: 538 STGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFAD 597
+TG+ + V GL+ F LA R F T ++R P + Y EPDV H+L GHVPL +
Sbjct: 95 ATGWKIVAVPGLIPDDVFFEHLANRRFPVTWWLREPHQLDYLQEPDVFHDLFGHVPLLIN 154
Query: 598 PSFAQFSQEIGLASLGAPYLFYYVCHELLGHVPLFADPSFAQFSQEIGL 646
P FA + + G + A + LG +P+ A ++ E GL
Sbjct: 155 PVFADYLEAYGKGGVKA---------KALGALPMLA--RLYWYTVEFGL 192
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 72/176 (40%), Gaps = 28/176 (15%)
Query: 3 PLPRVDYTAEETKTWGEVFRNLTKLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDISK 62
P P Y+AE+ TW +++ KL P AC E F ++ D +P +++
Sbjct: 35 PQPLDRYSAEDHATWATLYQRQCKLLPGRACDE----FLEGLERLEVDADRVPDFNKLNE 90
Query: 63 FLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFII----- 117
L +TG+ + V GL+ F LA R F T ++R P + Y EPD +
Sbjct: 91 KLMAATGWKIVAVPGLIPDDVFFEHLANRRFPVTWWLREPHQLDYLQEPDVFHDLFGHVP 150
Query: 118 ----------------GANRGNGLAAI-QVGKAYGLTV-FASVGCPVGVAKAYGLG 155
G + L A+ + + Y TV F + P G+ + YG G
Sbjct: 151 LLINPVFADYLEAYGKGGVKAKALGALPMLARLYWYTVEFGLINTPAGM-RIYGAG 205
>pdb|3FBG|A Chain A, Crystal Structure Of A Putative Arginate Lyase From
Staphylococcus Haemolyticus
pdb|3FBG|B Chain B, Crystal Structure Of A Putative Arginate Lyase From
Staphylococcus Haemolyticus
Length = 346
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%)
Query: 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDR 169
E TL II G G A Q+ KAYGL V + + +GAD V++H L++
Sbjct: 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGADIVLNHKESLLNQ 209
Query: 170 FANQ 173
F Q
Sbjct: 210 FKTQ 213
>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
pdb|2EIH|B Chain B, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
Length = 343
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Query: 112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHT----IREL 167
D + ++ A G +AAIQ+ K +G V A+ G + +A LGAD V++T +E+
Sbjct: 168 DDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGADETVNYTHPDWPKEV 227
Query: 168 DRFANQILSYGSELDADHPG 187
R G++ DH G
Sbjct: 228 RRLTG---GKGADKVVDHTG 244
>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
pdb|1YB5|B Chain B, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
Length = 351
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 4/102 (3%)
Query: 83 DFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASV 142
DF G A + + T Y R +++ + GA+ G GLAA Q+ +AYGL + +
Sbjct: 144 DFKQGAAIGIPYFTAY-RALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTA 202
Query: 143 GCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDAD 184
G G GA V +H RE++ + ++I Y E D
Sbjct: 203 GTEEGQKIVLQNGAHEVFNH--REVN-YIDKIKKYVGEKGID 241
>pdb|1MDO|A Chain A, Crystal Structure Of Arnb Aminotransferase With Pyridomine
5' Phosphate
Length = 393
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 31/68 (45%)
Query: 437 GFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPS 496
G + + L ++ GL FR H+ +Y R L P+ + E + +PLF D +
Sbjct: 309 GITRDALXASLKTKGIGTGLHFRAAHTQKYYRERFPTLTLPDTEWNSERICSLPLFPDXT 368
Query: 497 FAQFSQEI 504
+ F + I
Sbjct: 369 ESDFDRVI 376
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 31/68 (45%)
Query: 540 GFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPS 599
G + + L ++ GL FR H+ +Y R L P+ + E + +PLF D +
Sbjct: 309 GITRDALXASLKTKGIGTGLHFRAAHTQKYYRERFPTLTLPDTEWNSERICSLPLFPDXT 368
Query: 600 FAQFSQEI 607
+ F + I
Sbjct: 369 ESDFDRVI 376
>pdb|3HZZ|A Chain A, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|B Chain B, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|C Chain C, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|D Chain D, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
Length = 467
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 43/109 (39%), Gaps = 21/109 (19%)
Query: 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTI----- 164
+ D + I GA+ G G A Q A G V P +GA+ ++D
Sbjct: 246 QGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEICRSMGAEAIIDRNAEGYKF 305
Query: 165 ---------RELDRFANQI--LSYGSELDA--DHPG---FTDPVYRARR 197
+E RF +I L+ G ++D +HPG F VY R+
Sbjct: 306 WKDEHTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRETFGASVYVTRK 354
>pdb|1MDX|A Chain A, Crystal Structure Of Arnb Transferase With Pyridoxal 5'
Phosphate
pdb|1MDZ|A Chain A, Crystal Structure Of Arnb Aminotransferase With
Cycloserine And Pyridoxal 5' Phosphate
Length = 393
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 31/68 (45%)
Query: 437 GFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPS 496
G + + L ++ GL FR H+ +Y R L P+ + E + +PLF D +
Sbjct: 309 GITRDALMASLKTKGIGTGLHFRAAHTQKYYRERFPTLTLPDTEWNSERICSLPLFPDMT 368
Query: 497 FAQFSQEI 504
+ F + I
Sbjct: 369 ESDFDRVI 376
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 31/68 (45%)
Query: 540 GFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPS 599
G + + L ++ GL FR H+ +Y R L P+ + E + +PLF D +
Sbjct: 309 GITRDALMASLKTKGIGTGLHFRAAHTQKYYRERFPTLTLPDTEWNSERICSLPLFPDMT 368
Query: 600 FAQFSQEI 607
+ F + I
Sbjct: 369 ESDFDRVI 376
>pdb|3S5W|A Chain A, Ornithine Hydroxylase (Pvda) From Pseudomonas Aeruginosa
pdb|3S5W|B Chain B, Ornithine Hydroxylase (Pvda) From Pseudomonas Aeruginosa
pdb|3S61|A Chain A, Reduced Form Of Ornithine Hydroxylase (Pvda) From
Pseudomonas Aeruginosa
pdb|3S61|B Chain B, Reduced Form Of Ornithine Hydroxylase (Pvda) From
Pseudomonas Aeruginosa
Length = 463
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 91 RVFHSTQYIRHPSK-PLYTPEPDTLFIIGANRGNGLAAIQVGKAY 134
RVFH +QY+ H +K P + +P + IIG + A I + +Y
Sbjct: 206 RVFHHSQYLEHMAKQPCSSGKPMKIAIIGGGQSAAEAFIDLNDSY 250
>pdb|1PQW|A Chain A, Putative Enoyl Reductase Domain Of Polyketide Synthase
pdb|1PQW|B Chain B, Putative Enoyl Reductase Domain Of Polyketide Synthase
Length = 198
Score = 31.2 bits (69), Expect = 2.1, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Query: 112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFA 171
+ + I A G G+AA+ + K G ++ + G LG +YV D R +D FA
Sbjct: 40 ERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGVEYVGDS--RSVD-FA 96
Query: 172 NQIL 175
++IL
Sbjct: 97 DEIL 100
>pdb|2EER|A Chain A, Structural Study Of Project Id St2577 From Sulfolobus
Tokodaii Strain7
pdb|2EER|B Chain B, Structural Study Of Project Id St2577 From Sulfolobus
Tokodaii Strain7
Length = 347
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 113 TLFIIGANRGNGLAAIQVGKAY-GLTVFASVGCPVGVAKAYGLGADYVVDHT 163
TL +IGA G G AIQ+ KA G T+ + A GADYV++ +
Sbjct: 173 TLVVIGAGGGLGTMAIQIAKAVSGATIIGVDVREEALEAAKRAGADYVINAS 224
>pdb|4DVJ|A Chain A, Crystal Structure Of A Putative Zinc-Dependent Alcohol
Dehydrogenase Protein From Rhizobium Etli Cfn 42
pdb|4DVJ|B Chain B, Crystal Structure Of A Putative Zinc-Dependent Alcohol
Dehydrogenase Protein From Rhizobium Etli Cfn 42
Length = 363
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 103 SKPLYTPEPDTLFIIGANRGNGLAAIQVGKA-YGLTVFASVGCPVGVAKAYGLGADYVVD 161
+KP+ P + I+G G G A+Q+ + LTV A+ P LGA +V+D
Sbjct: 165 NKPVPGAAP-AILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSLGAHHVID 223
Query: 162 HT 163
H+
Sbjct: 224 HS 225
>pdb|2QMW|A Chain A, The Crystal Structure Of The Prephenate Dehydratase (Pdt)
From Staphylococcus Aureus Subsp. Aureus Mu50
pdb|2QMW|B Chain B, The Crystal Structure Of The Prephenate Dehydratase (Pdt)
From Staphylococcus Aureus Subsp. Aureus Mu50
Length = 267
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 3/66 (4%)
Query: 263 FVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVEC--APGGDLSSV 320
F+I H D+ G LA L F N+NL IESR Y F V+ A D+ V
Sbjct: 191 FLITPXH-DKPGLLASVLNTFALFNINLSWIESRPLKTQLGXYRFFVQADSAITTDIKKV 249
Query: 321 IESLRS 326
I L +
Sbjct: 250 IAILET 255
>pdb|3MWB|A Chain A, The Crystal Structure Of Prephenate Dehydratase In Complex
With L-Phe From Arthrobacter Aurescens To 2.0a
pdb|3MWB|B Chain B, The Crystal Structure Of Prephenate Dehydratase In Complex
With L-Phe From Arthrobacter Aurescens To 2.0a
Length = 313
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 270 QDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVEC 311
+D GAL + L F VNL IESR + + +Y F ++
Sbjct: 210 EDHPGALXEILDQFASRGVNLSRIESRPTGQYLGHYFFSIDA 251
>pdb|4DUP|A Chain A, Crystal Structure Of A Quinone Oxidoreductase From
Rhizobium Etli Cfn 42
pdb|4DUP|B Chain B, Crystal Structure Of A Quinone Oxidoreductase From
Rhizobium Etli Cfn 42
Length = 353
Score = 29.6 bits (65), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVG 143
E +++ I G G G AIQ+ +A+G V+A+ G
Sbjct: 167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAG 200
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.140 0.432
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,640,260
Number of Sequences: 62578
Number of extensions: 825463
Number of successful extensions: 1689
Number of sequences better than 100.0: 40
Number of HSP's better than 100.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1566
Number of HSP's gapped (non-prelim): 124
length of query: 655
length of database: 14,973,337
effective HSP length: 105
effective length of query: 550
effective length of database: 8,402,647
effective search space: 4621455850
effective search space used: 4621455850
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)