Query psy14589
Match_columns 655
No_of_seqs 620 out of 3799
Neff 6.4
Searched_HMMs 46136
Date Fri Aug 16 23:45:31 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14589.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/14589hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3820|consensus 100.0 5E-106 1E-110 832.4 26.0 355 260-636 35-434 (461)
2 TIGR01268 Phe4hydrox_tetr phen 100.0 5E-102 1E-106 834.7 32.5 354 260-637 15-413 (436)
3 TIGR01270 Trp_5_monoox tryptop 100.0 1.2E-99 3E-104 817.1 32.5 357 257-637 27-441 (464)
4 TIGR01269 Tyr_3_monoox tyrosin 100.0 2.7E-97 6E-102 788.7 32.0 356 261-637 37-434 (457)
5 PF00351 Biopterin_H: Biopteri 100.0 4E-87 8.6E-92 691.8 15.8 271 345-636 1-310 (332)
6 cd03347 eu_PheOH Eukaryotic ph 100.0 1.8E-84 3.8E-89 665.6 22.6 270 345-632 1-306 (306)
7 cd03345 eu_TyrOH Eukaryotic ty 100.0 1.1E-82 2.4E-87 650.4 22.1 262 346-625 1-298 (298)
8 cd03346 eu_TrpOH Eukaryotic tr 100.0 1.3E-80 2.9E-85 633.2 21.4 227 345-576 1-261 (287)
9 PRK11913 phhA phenylalanine 4- 100.0 2.9E-62 6.2E-67 499.2 14.7 202 377-588 1-241 (275)
10 cd03348 pro_PheOH Prokaryotic 100.0 3.2E-59 7E-64 465.2 17.0 196 371-577 7-210 (228)
11 cd00361 arom_aa_hydroxylase Bi 100.0 4E-59 8.8E-64 463.2 16.6 195 374-579 4-205 (221)
12 TIGR01267 Phe4hydrox_mono phen 100.0 1.4E-58 2.9E-63 464.6 15.8 196 371-577 7-210 (248)
13 PRK14055 aromatic amino acid h 100.0 8.5E-54 1.9E-58 439.3 11.9 199 398-612 120-345 (362)
14 PRK14056 phenylalanine 4-monoo 100.0 1.1E-50 2.4E-55 440.2 17.2 197 369-577 15-262 (578)
15 COG3186 Phenylalanine-4-hydrox 100.0 2.3E-48 4.9E-53 383.3 10.6 190 382-580 46-244 (291)
16 cd03348 pro_PheOH Prokaryotic 100.0 1.3E-32 2.8E-37 274.6 3.2 132 470-616 6-143 (228)
17 TIGR01267 Phe4hydrox_mono phen 100.0 3.7E-32 8.1E-37 273.7 3.7 133 470-617 6-144 (248)
18 cd00361 arom_aa_hydroxylase Bi 100.0 4.4E-32 9.5E-37 270.0 2.8 129 473-616 3-137 (221)
19 PRK11913 phhA phenylalanine 4- 100.0 5.1E-32 1.1E-36 277.2 3.2 139 464-617 16-160 (275)
20 cd03346 eu_TrpOH Eukaryotic tr 100.0 7.5E-31 1.6E-35 268.5 6.9 147 450-615 40-196 (287)
21 cd03347 eu_PheOH Eukaryotic ph 100.0 4.5E-31 9.7E-36 271.8 4.7 150 450-615 40-196 (306)
22 cd03345 eu_TyrOH Eukaryotic ty 100.0 2.9E-30 6.3E-35 265.0 6.9 145 450-616 39-196 (298)
23 COG3186 Phenylalanine-4-hydrox 100.0 4.2E-30 9.1E-35 254.2 3.0 124 482-617 46-175 (291)
24 TIGR01269 Tyr_3_monoox tyrosin 100.0 1.9E-29 4E-34 269.9 7.1 154 449-616 162-320 (457)
25 TIGR01268 Phe4hydrox_tetr phen 100.0 3.7E-29 8E-34 270.5 7.0 152 449-616 141-299 (436)
26 TIGR01270 Trp_5_monoox tryptop 100.0 3.1E-29 6.7E-34 271.6 4.5 149 449-616 168-326 (464)
27 PRK14055 aromatic amino acid h 99.9 1.3E-28 2.8E-33 253.9 3.9 119 483-614 104-228 (362)
28 PRK14056 phenylalanine 4-monoo 99.9 2.1E-28 4.5E-33 266.9 2.1 135 464-614 10-150 (578)
29 PF00351 Biopterin_H: Biopteri 99.9 1.5E-28 3.3E-33 255.6 -0.3 148 450-616 40-197 (332)
30 COG1064 AdhP Zn-dependent alco 99.9 1.9E-24 4E-29 229.0 16.3 243 13-327 75-327 (339)
31 COG0604 Qor NADPH:quinone redu 99.9 5.8E-23 1.3E-27 219.7 18.9 199 8-214 8-242 (326)
32 KOG3820|consensus 99.9 3.8E-24 8.2E-29 223.5 5.1 151 449-616 163-321 (461)
33 KOG1197|consensus 99.9 5.7E-21 1.2E-25 191.3 16.0 200 8-215 16-247 (336)
34 KOG0023|consensus 99.8 6.8E-20 1.5E-24 189.5 16.5 250 14-312 84-355 (360)
35 PRK09880 L-idonate 5-dehydroge 99.8 4.2E-18 9.1E-23 182.7 18.9 171 26-213 89-266 (343)
36 KOG0024|consensus 99.8 2.9E-18 6.3E-23 177.9 16.9 248 25-334 92-349 (354)
37 COG2130 Putative NADP-dependen 99.8 3.5E-18 7.6E-23 175.7 15.9 154 52-213 86-249 (340)
38 KOG1198|consensus 99.8 4E-18 8.8E-23 183.5 16.9 129 78-213 120-255 (347)
39 COG1063 Tdh Threonine dehydrog 99.8 1.5E-17 3.3E-22 179.7 20.2 253 24-334 84-347 (350)
40 cd08281 liver_ADH_like1 Zinc-d 99.8 7.3E-18 1.6E-22 182.8 17.7 178 28-213 95-290 (371)
41 PLN02178 cinnamyl-alcohol dehy 99.8 1.7E-17 3.8E-22 180.7 19.8 237 29-328 96-339 (375)
42 PLN02586 probable cinnamyl alc 99.8 1.5E-17 3.3E-22 180.0 18.9 238 29-328 102-344 (360)
43 TIGR03201 dearomat_had 6-hydro 99.8 2E-17 4.2E-22 177.9 19.4 173 27-213 85-272 (349)
44 cd08239 THR_DH_like L-threonin 99.8 1.9E-17 4.1E-22 176.6 18.0 168 26-213 86-262 (339)
45 TIGR02818 adh_III_F_hyde S-(hy 99.8 3E-17 6.4E-22 178.1 18.9 182 26-213 87-287 (368)
46 TIGR03366 HpnZ_proposed putati 99.7 1.8E-17 4E-22 172.9 16.4 173 25-213 35-218 (280)
47 TIGR02825 B4_12hDH leukotriene 99.7 1.6E-17 3.4E-22 176.4 15.6 129 79-213 107-237 (325)
48 PLN03154 putative allyl alcoho 99.7 1.9E-17 4.1E-22 178.5 15.7 129 79-213 127-258 (348)
49 PLN02740 Alcohol dehydrogenase 99.7 4.1E-17 8.9E-22 177.8 17.8 182 26-213 97-300 (381)
50 PLN02827 Alcohol dehydrogenase 99.7 1.7E-16 3.6E-21 173.1 20.4 182 26-213 95-295 (378)
51 COG0077 PheA Prephenate dehydr 99.7 1.5E-17 3.2E-22 171.7 10.3 94 239-336 174-271 (279)
52 TIGR03451 mycoS_dep_FDH mycoth 99.7 5.6E-17 1.2E-21 174.9 15.2 179 26-213 86-276 (358)
53 cd08277 liver_alcohol_DH_like 99.7 4.4E-16 9.5E-21 168.6 21.1 182 26-213 87-286 (365)
54 TIGR02822 adh_fam_2 zinc-bindi 99.7 1.6E-16 3.4E-21 170.0 17.2 158 30-213 93-254 (329)
55 cd08295 double_bond_reductase_ 99.7 9.6E-17 2.1E-21 171.4 15.4 127 81-213 122-251 (338)
56 COG1062 AdhC Zn-dependent alco 99.7 9.3E-17 2E-21 168.1 14.4 244 29-326 90-356 (366)
57 cd08294 leukotriene_B4_DH_like 99.7 1.4E-16 3.1E-21 168.2 15.7 122 85-213 119-241 (329)
58 cd08301 alcohol_DH_plants Plan 99.7 4.3E-16 9.2E-21 168.7 18.5 180 26-213 88-289 (369)
59 PLN02514 cinnamyl-alcohol dehy 99.7 1.6E-15 3.5E-20 163.8 22.4 236 29-328 99-341 (357)
60 cd08300 alcohol_DH_class_III c 99.7 2E-16 4.4E-21 171.3 15.2 182 26-213 88-288 (368)
61 PRK11899 prephenate dehydratas 99.7 7E-17 1.5E-21 168.6 10.8 96 239-336 173-271 (279)
62 cd08293 PTGR2 Prostaglandin re 99.7 3.9E-16 8.5E-21 166.5 14.7 120 87-213 130-254 (345)
63 PRK10309 galactitol-1-phosphat 99.7 2.9E-15 6.4E-20 160.5 18.9 165 26-213 85-260 (347)
64 cd08296 CAD_like Cinnamyl alco 99.7 4.9E-15 1.1E-19 157.9 20.2 166 29-213 90-259 (333)
65 cd08231 MDR_TM0436_like Hypoth 99.7 7E-15 1.5E-19 158.3 21.4 178 26-213 92-280 (361)
66 cd08233 butanediol_DH_like (2R 99.6 2.8E-15 6E-20 160.9 17.2 126 78-213 143-272 (351)
67 cd08246 crotonyl_coA_red croto 99.6 5.8E-15 1.3E-19 161.2 19.6 132 78-213 160-315 (393)
68 cd04904 ACT_AAAH ACT domain of 99.6 5.5E-16 1.2E-20 130.7 8.6 72 262-334 1-73 (74)
69 PRK11898 prephenate dehydratas 99.6 6.3E-16 1.4E-20 162.3 10.8 97 239-336 175-274 (283)
70 cd08230 glucose_DH Glucose deh 99.6 5.6E-15 1.2E-19 159.1 16.9 167 28-213 90-269 (355)
71 KOG1196|consensus 99.6 5.5E-15 1.2E-19 151.9 15.3 124 85-214 129-254 (343)
72 KOG0022|consensus 99.6 3.6E-15 7.7E-20 154.1 13.9 229 28-295 95-348 (375)
73 PRK10622 pheA bifunctional cho 99.6 1.6E-15 3.6E-20 165.3 10.9 95 239-336 277-374 (386)
74 PLN02317 arogenate dehydratase 99.6 1.8E-15 4E-20 162.9 10.5 95 239-336 263-374 (382)
75 cd08285 NADP_ADH NADP(H)-depen 99.6 3.3E-14 7.2E-19 152.5 20.1 127 78-213 136-266 (351)
76 TIGR02819 fdhA_non_GSH formald 99.6 9.6E-15 2.1E-19 160.3 15.8 181 25-214 92-300 (393)
77 TIGR01751 crot-CoA-red crotony 99.6 2.6E-14 5.7E-19 156.6 18.8 132 78-213 156-310 (398)
78 KOG1202|consensus 99.6 3.5E-15 7.7E-20 171.4 10.9 167 40-213 1459-1655(2376)
79 cd05278 FDH_like Formaldehyde 99.6 7.5E-14 1.6E-18 148.8 20.1 127 78-213 137-267 (347)
80 cd08299 alcohol_DH_class_I_II_ 99.6 3.1E-14 6.8E-19 154.8 15.5 182 26-213 92-292 (373)
81 cd08291 ETR_like_1 2-enoyl thi 99.6 3E-14 6.5E-19 151.2 14.8 127 78-213 113-242 (324)
82 cd08292 ETR_like_2 2-enoyl thi 99.6 3.7E-14 8E-19 149.3 15.3 128 78-213 109-238 (324)
83 cd08256 Zn_ADH2 Alcohol dehydr 99.6 2.1E-13 4.7E-18 146.2 21.0 126 78-213 145-274 (350)
84 cd08243 quinone_oxidoreductase 99.6 5.9E-14 1.3E-18 146.7 16.1 128 78-213 111-238 (320)
85 cd08265 Zn_ADH3 Alcohol dehydr 99.6 1.4E-13 3E-18 150.2 19.4 124 85-213 178-307 (384)
86 PRK09422 ethanol-active dehydr 99.5 1.2E-13 2.7E-18 146.7 17.6 128 78-213 132-261 (338)
87 cd04930 ACT_TH ACT domain of t 99.5 1.4E-14 3.1E-19 132.2 8.9 74 260-334 40-114 (115)
88 TIGR02817 adh_fam_1 zinc-bindi 99.5 7.2E-14 1.6E-18 148.2 15.7 128 78-213 112-247 (336)
89 cd08254 hydroxyacyl_CoA_DH 6-h 99.5 2E-13 4.4E-18 144.4 18.8 128 78-213 134-263 (338)
90 cd04929 ACT_TPH ACT domain of 99.5 1.2E-14 2.7E-19 122.5 7.5 69 262-331 1-70 (74)
91 cd08240 6_hydroxyhexanoate_dh_ 99.5 1.6E-13 3.4E-18 147.1 17.3 128 78-213 144-274 (350)
92 cd08283 FDH_like_1 Glutathione 99.5 1.7E-13 3.6E-18 149.7 17.7 131 78-213 154-306 (386)
93 cd08278 benzyl_alcohol_DH Benz 99.5 2E-13 4.3E-18 147.9 17.1 128 78-213 155-285 (365)
94 cd04931 ACT_PAH ACT domain of 99.5 3.3E-14 7.1E-19 124.3 8.9 69 258-327 11-81 (90)
95 cd05282 ETR_like 2-enoyl thioe 99.5 1.4E-13 2.9E-18 144.8 15.4 129 78-213 107-237 (323)
96 PRK13771 putative alcohol dehy 99.5 1.9E-13 4.1E-18 145.1 16.3 124 78-213 132-255 (334)
97 PRK10754 quinone oxidoreductas 99.5 2.1E-13 4.5E-18 144.4 16.4 129 78-213 109-239 (327)
98 cd05284 arabinose_DH_like D-ar 99.5 1.7E-13 3.8E-18 145.7 15.8 127 78-213 135-266 (340)
99 cd08289 MDR_yhfp_like Yhfp put 99.5 1.5E-13 3.3E-18 144.9 14.9 129 78-213 112-243 (326)
100 cd08284 FDH_like_2 Glutathione 99.5 2.4E-13 5.2E-18 144.9 16.4 126 78-213 137-266 (344)
101 cd08274 MDR9 Medium chain dehy 99.5 4E-13 8.7E-18 143.3 18.1 126 78-213 147-273 (350)
102 cd08260 Zn_ADH6 Alcohol dehydr 99.5 1.8E-13 4E-18 146.1 15.2 128 78-213 134-264 (345)
103 PF00107 ADH_zinc_N: Zinc-bind 99.5 6.1E-14 1.3E-18 129.1 9.8 86 122-213 1-89 (130)
104 cd08297 CAD3 Cinnamyl alcohol 99.5 7E-13 1.5E-17 141.3 19.3 128 78-213 135-265 (341)
105 PTZ00354 alcohol dehydrogenase 99.5 3.7E-13 7.9E-18 142.0 16.4 130 78-213 109-240 (334)
106 cd05279 Zn_ADH1 Liver alcohol 99.5 3.6E-13 7.7E-18 145.9 16.6 130 78-213 152-285 (365)
107 cd05288 PGDH Prostaglandin deh 99.5 3.3E-13 7.1E-18 142.6 15.7 129 78-213 111-244 (329)
108 cd08263 Zn_ADH10 Alcohol dehyd 99.5 2.7E-13 5.9E-18 146.6 15.4 128 78-213 156-287 (367)
109 cd08279 Zn_ADH_class_III Class 99.5 3.7E-13 8.1E-18 145.4 16.3 181 25-213 84-282 (363)
110 cd08264 Zn_ADH_like2 Alcohol d 99.5 2.4E-13 5.2E-18 143.7 14.2 162 26-213 86-253 (325)
111 cd05285 sorbitol_DH Sorbitol d 99.5 3.1E-13 6.6E-18 144.6 14.9 129 78-213 133-265 (343)
112 KOG0025|consensus 99.5 8.7E-13 1.9E-17 135.1 17.3 124 81-213 132-263 (354)
113 PRK10083 putative oxidoreducta 99.5 1.8E-13 3.9E-18 145.7 13.0 126 78-213 131-259 (339)
114 cd08290 ETR 2-enoyl thioester 99.5 3.7E-13 8.1E-18 143.2 15.0 132 78-213 115-251 (341)
115 cd08259 Zn_ADH5 Alcohol dehydr 99.5 1.3E-12 2.8E-17 137.7 18.6 125 78-213 132-256 (332)
116 cd08237 ribitol-5-phosphate_DH 99.5 3.4E-13 7.4E-18 144.9 14.4 121 78-213 131-256 (341)
117 cd08266 Zn_ADH_like1 Alcohol d 99.5 1.3E-12 2.8E-17 137.4 18.4 169 26-213 89-265 (342)
118 cd08244 MDR_enoyl_red Possible 99.5 6.4E-13 1.4E-17 139.7 16.0 128 78-213 112-241 (324)
119 cd08238 sorbose_phosphate_red 99.5 7.1E-13 1.5E-17 146.1 17.0 178 78-291 134-337 (410)
120 cd04880 ACT_AAAH-PDT-like ACT 99.5 1.7E-13 3.7E-18 115.4 8.4 72 263-335 1-75 (75)
121 cd05286 QOR2 Quinone oxidoredu 99.5 9.4E-13 2E-17 136.5 15.8 129 78-213 105-235 (320)
122 TIGR01202 bchC 2-desacetyl-2-h 99.5 1.6E-12 3.5E-17 137.7 17.6 159 79-292 118-278 (308)
123 cd08287 FDH_like_ADH3 formalde 99.5 2.2E-12 4.7E-17 137.8 18.7 116 89-213 149-268 (345)
124 cd05188 MDR Medium chain reduc 99.5 8.1E-13 1.8E-17 134.4 14.7 128 78-213 103-232 (271)
125 cd08261 Zn_ADH7 Alcohol dehydr 99.4 1.9E-12 4.2E-17 137.9 17.4 126 78-213 130-258 (337)
126 cd05280 MDR_yhdh_yhfp Yhdh and 99.4 1.2E-12 2.5E-17 137.8 15.5 128 78-213 112-243 (325)
127 cd05283 CAD1 Cinnamyl alcohol 99.4 4.5E-12 9.8E-17 135.4 20.0 124 78-213 139-263 (337)
128 cd05195 enoyl_red enoyl reduct 99.4 1.5E-12 3.2E-17 132.9 15.0 129 78-213 77-209 (293)
129 cd08251 polyketide_synthase po 99.4 2E-12 4.3E-17 133.7 16.1 128 78-213 90-219 (303)
130 smart00829 PKS_ER Enoylreducta 99.4 1.6E-12 3.4E-17 132.8 14.9 129 78-213 73-205 (288)
131 cd08250 Mgc45594_like Mgc45594 99.4 1.3E-12 2.8E-17 138.2 14.6 123 84-213 114-237 (329)
132 cd08249 enoyl_reductase_like e 99.4 1.2E-12 2.7E-17 140.0 14.3 129 78-213 113-254 (339)
133 TIGR02823 oxido_YhdH putative 99.4 1.6E-12 3.4E-17 137.2 14.9 127 78-213 111-241 (323)
134 cd08252 AL_MDR Arginate lyase 99.4 2.2E-12 4.7E-17 136.8 15.4 128 78-213 113-248 (336)
135 cd08286 FDH_like_ADH2 formalde 99.4 1.8E-12 3.9E-17 138.5 14.4 128 78-213 135-266 (345)
136 cd04905 ACT_CM-PDT C-terminal 99.4 9E-13 2E-17 112.5 9.3 75 261-336 1-78 (80)
137 cd08276 MDR7 Medium chain dehy 99.4 8E-12 1.7E-16 131.7 18.5 128 78-213 129-259 (336)
138 cd08298 CAD2 Cinnamyl alcohol 99.4 8E-12 1.7E-16 132.4 18.5 119 78-213 137-256 (329)
139 cd08282 PFDH_like Pseudomonas 99.4 3E-12 6.6E-17 139.2 15.2 129 78-213 143-285 (375)
140 cd08270 MDR4 Medium chain dehy 99.4 3.7E-12 8.1E-17 132.9 14.6 121 78-213 102-222 (305)
141 cd08245 CAD Cinnamyl alcohol d 99.4 1.4E-11 3E-16 130.6 18.9 124 78-213 132-256 (330)
142 cd08253 zeta_crystallin Zeta-c 99.4 6.4E-12 1.4E-16 130.8 16.0 129 78-213 113-243 (325)
143 cd08262 Zn_ADH8 Alcohol dehydr 99.4 1.1E-11 2.3E-16 132.3 17.8 128 78-213 132-264 (341)
144 cd08235 iditol_2_DH_like L-idi 99.4 6.6E-12 1.4E-16 133.8 15.5 126 78-213 136-265 (343)
145 PLN02702 L-idonate 5-dehydroge 99.4 6.5E-12 1.4E-16 135.7 15.5 172 25-213 104-285 (364)
146 cd08258 Zn_ADH4 Alcohol dehydr 99.4 1.1E-11 2.3E-16 131.1 16.7 127 78-214 134-265 (306)
147 cd08248 RTN4I1 Human Reticulon 99.4 7E-12 1.5E-16 133.8 15.5 127 78-213 127-257 (350)
148 TIGR02824 quinone_pig3 putativ 99.4 1.1E-11 2.4E-16 129.2 16.4 129 78-213 108-238 (325)
149 PRK05396 tdh L-threonine 3-deh 99.4 6.9E-12 1.5E-16 133.9 14.9 125 78-213 135-263 (341)
150 cd08288 MDR_yhdh Yhdh putative 99.4 1.3E-11 2.8E-16 130.1 16.0 127 78-213 112-242 (324)
151 cd05276 p53_inducible_oxidored 99.3 1.8E-11 3.8E-16 127.2 16.2 129 78-213 108-238 (323)
152 cd08241 QOR1 Quinone oxidoredu 99.3 2.9E-11 6.2E-16 125.8 15.6 129 78-213 108-238 (323)
153 cd08268 MDR2 Medium chain dehy 99.3 3.2E-11 7E-16 125.9 16.0 129 78-213 113-243 (328)
154 cd08236 sugar_DH NAD(P)-depend 99.3 2.1E-11 4.5E-16 130.1 14.8 125 78-213 130-258 (343)
155 cd08273 MDR8 Medium chain dehy 99.3 2.3E-11 5.1E-16 128.4 15.0 126 78-213 108-233 (331)
156 cd08272 MDR6 Medium chain dehy 99.3 3.6E-11 7.8E-16 125.6 16.1 127 78-213 113-241 (326)
157 cd08269 Zn_ADH9 Alcohol dehydr 99.3 2.4E-11 5.2E-16 127.1 14.6 118 87-213 107-229 (312)
158 cd08267 MDR1 Medium chain dehy 99.3 7.2E-11 1.6E-15 123.4 18.2 129 78-213 112-240 (319)
159 cd05289 MDR_like_2 alcohol deh 99.3 9E-11 2E-15 121.5 18.6 126 78-213 113-238 (309)
160 cd08247 AST1_like AST1 is a cy 99.3 3E-11 6.5E-16 129.6 15.4 128 78-213 119-259 (352)
161 TIGR00692 tdh L-threonine 3-de 99.3 2.9E-11 6.2E-16 129.2 14.5 125 78-213 133-261 (340)
162 cd08271 MDR5 Medium chain dehy 99.3 4.9E-11 1.1E-15 124.9 15.6 128 78-213 110-239 (325)
163 cd08232 idonate-5-DH L-idonate 99.3 4E-11 8.6E-16 127.7 15.1 125 78-213 136-262 (339)
164 cd08234 threonine_DH_like L-th 99.3 4.9E-11 1.1E-15 126.4 15.0 125 78-213 130-257 (334)
165 cd05281 TDH Threonine dehydrog 99.3 6.5E-11 1.4E-15 126.5 14.8 124 78-213 135-262 (341)
166 cd08255 2-desacetyl-2-hydroxye 99.2 7.2E-11 1.6E-15 122.0 13.8 120 78-213 68-190 (277)
167 cd08242 MDR_like Medium chain 99.2 7.4E-11 1.6E-15 124.6 14.0 119 78-213 126-245 (319)
168 cd08275 MDR3 Medium chain dehy 99.2 1.8E-10 3.9E-15 121.3 15.4 128 78-213 107-236 (337)
169 KOG2797|consensus 99.1 8.9E-11 1.9E-15 120.5 7.1 95 239-336 261-367 (377)
170 cd00401 AdoHcyase S-adenosyl-L 98.9 7.1E-09 1.5E-13 114.2 11.6 101 97-213 188-289 (413)
171 PRK09424 pntA NAD(P) transhydr 98.9 1.1E-08 2.5E-13 115.2 12.8 104 109-213 163-285 (509)
172 TIGR00561 pntA NAD(P) transhyd 98.2 2.6E-05 5.6E-10 88.2 14.3 100 110-213 163-284 (511)
173 TIGR00936 ahcY adenosylhomocys 98.1 1.3E-05 2.9E-10 88.3 11.5 102 96-213 180-282 (406)
174 PRK05476 S-adenosyl-L-homocyst 98.1 1.4E-05 3.1E-10 88.6 11.3 103 95-213 196-299 (425)
175 PLN02494 adenosylhomocysteinas 98.0 2.8E-05 6.1E-10 86.7 11.0 101 98-213 241-341 (477)
176 PRK08306 dipicolinate synthase 97.8 0.00024 5.3E-09 75.5 13.0 91 110-213 151-241 (296)
177 PRK05786 fabG 3-ketoacyl-(acyl 97.8 0.00025 5.4E-09 71.4 12.2 102 110-213 4-135 (238)
178 PRK05693 short chain dehydroge 97.7 0.00037 7.9E-09 72.2 13.1 79 112-190 2-82 (274)
179 PTZ00075 Adenosylhomocysteinas 97.7 0.00032 7E-09 78.6 12.2 99 99-213 242-341 (476)
180 PRK08818 prephenate dehydrogen 97.6 9.5E-05 2.1E-09 80.8 7.0 52 260-313 294-345 (370)
181 PRK12742 oxidoreductase; Provi 97.6 0.00057 1.2E-08 68.8 11.9 78 110-190 5-85 (237)
182 PRK11873 arsM arsenite S-adeno 97.6 0.0003 6.5E-09 73.4 10.0 101 105-213 73-183 (272)
183 PRK06182 short chain dehydroge 97.6 0.00094 2E-08 69.2 13.5 79 110-190 2-84 (273)
184 PRK08324 short chain dehydroge 97.5 0.00068 1.5E-08 80.1 12.8 102 110-213 421-557 (681)
185 COG4221 Short-chain alcohol de 97.5 0.00047 1E-08 70.7 9.7 80 110-191 5-92 (246)
186 TIGR00518 alaDH alanine dehydr 97.5 0.001 2.2E-08 73.0 13.2 97 110-213 166-267 (370)
187 PRK00377 cbiT cobalt-precorrin 97.5 0.00077 1.7E-08 67.2 11.0 100 106-212 37-144 (198)
188 cd05213 NAD_bind_Glutamyl_tRNA 97.5 0.00044 9.5E-09 74.0 9.7 88 92-192 157-250 (311)
189 PRK05993 short chain dehydroge 97.4 0.0011 2.3E-08 69.2 10.5 81 110-190 3-86 (277)
190 PRK07109 short chain dehydroge 97.3 0.0025 5.5E-08 68.6 13.4 81 110-190 7-95 (334)
191 COG0300 DltE Short-chain dehyd 97.3 0.00084 1.8E-08 70.1 9.0 83 109-191 4-95 (265)
192 COG2242 CobL Precorrin-6B meth 97.3 0.0059 1.3E-07 60.4 14.3 99 106-212 31-134 (187)
193 PRK07806 short chain dehydroge 97.3 0.004 8.7E-08 63.2 13.4 102 110-213 5-134 (248)
194 PF13460 NAD_binding_10: NADH( 97.3 0.002 4.3E-08 62.4 10.6 93 114-213 1-97 (183)
195 PRK11705 cyclopropane fatty ac 97.3 0.0011 2.3E-08 73.1 9.5 117 87-213 145-267 (383)
196 PLN03209 translocon at the inn 97.3 0.0026 5.6E-08 73.1 12.7 85 100-191 70-170 (576)
197 COG3967 DltE Short-chain dehyd 97.2 0.0013 2.7E-08 65.8 8.8 82 110-191 4-89 (245)
198 PRK12771 putative glutamate sy 97.2 0.00018 4E-09 82.9 3.2 77 109-191 135-233 (564)
199 PRK06139 short chain dehydroge 97.2 0.0017 3.8E-08 70.0 10.5 81 110-190 6-94 (330)
200 PRK06500 short chain dehydroge 97.2 0.0044 9.6E-08 62.7 12.7 81 110-190 5-90 (249)
201 PRK07831 short chain dehydroge 97.2 0.0024 5.2E-08 65.6 10.6 82 109-190 15-107 (262)
202 PRK05872 short chain dehydroge 97.2 0.0021 4.6E-08 67.8 10.2 81 110-190 8-95 (296)
203 PRK08265 short chain dehydroge 97.2 0.0046 9.9E-08 63.7 12.5 81 110-190 5-90 (261)
204 PRK07060 short chain dehydroge 97.1 0.0026 5.6E-08 64.2 10.2 78 110-190 8-87 (245)
205 PRK07832 short chain dehydroge 97.1 0.0049 1.1E-07 63.8 12.4 78 113-190 2-88 (272)
206 PRK06079 enoyl-(acyl carrier p 97.1 0.0052 1.1E-07 63.1 12.3 81 110-190 6-93 (252)
207 PRK07576 short chain dehydroge 97.1 0.0058 1.3E-07 63.1 12.6 79 110-190 8-96 (264)
208 PRK12823 benD 1,6-dihydroxycyc 97.1 0.0075 1.6E-07 61.7 13.4 81 110-190 7-94 (260)
209 cd04886 ACT_ThrD-II-like C-ter 97.1 0.0018 4E-08 52.5 7.0 65 265-330 2-70 (73)
210 PRK08261 fabG 3-ketoacyl-(acyl 97.1 0.0054 1.2E-07 68.6 13.1 81 110-190 209-294 (450)
211 PRK12829 short chain dehydroge 97.1 0.0044 9.6E-08 63.3 11.3 82 110-191 10-97 (264)
212 PRK08339 short chain dehydroge 97.0 0.0085 1.8E-07 62.0 13.1 80 110-190 7-95 (263)
213 PRK06057 short chain dehydroge 97.0 0.0041 8.8E-08 63.6 10.6 81 110-190 6-89 (255)
214 PRK08017 oxidoreductase; Provi 97.0 0.004 8.7E-08 63.4 10.5 79 112-190 3-84 (256)
215 PRK12939 short chain dehydroge 97.0 0.0082 1.8E-07 60.7 12.7 81 110-190 6-94 (250)
216 PRK08217 fabG 3-ketoacyl-(acyl 97.0 0.0043 9.3E-08 62.8 10.4 81 110-190 4-92 (253)
217 PF12847 Methyltransf_18: Meth 97.0 0.0018 3.9E-08 57.6 6.6 96 110-212 1-110 (112)
218 PRK06200 2,3-dihydroxy-2,3-dih 97.0 0.0039 8.5E-08 64.1 10.1 81 110-190 5-90 (263)
219 PRK06949 short chain dehydroge 97.0 0.0029 6.2E-08 64.5 8.9 79 110-190 8-96 (258)
220 PRK08267 short chain dehydroge 97.0 0.0084 1.8E-07 61.4 12.3 77 112-190 2-87 (260)
221 PRK00045 hemA glutamyl-tRNA re 97.0 0.0014 3E-08 73.3 7.0 71 110-191 181-253 (423)
222 PF13602 ADH_zinc_N_2: Zinc-bi 97.0 0.00028 6.1E-09 64.5 1.3 49 154-213 1-51 (127)
223 PRK06841 short chain dehydroge 97.0 0.0042 9E-08 63.3 9.9 81 110-190 14-99 (255)
224 PRK06128 oxidoreductase; Provi 97.0 0.009 2E-07 63.0 12.8 81 110-190 54-144 (300)
225 TIGR03325 BphB_TodD cis-2,3-di 97.0 0.0041 8.8E-08 64.0 9.8 81 110-190 4-89 (262)
226 PF01842 ACT: ACT domain; Int 97.0 0.0029 6.3E-08 50.8 6.9 62 263-327 2-64 (66)
227 PRK12828 short chain dehydroge 96.9 0.0052 1.1E-07 61.5 10.2 81 110-190 6-92 (239)
228 PRK07814 short chain dehydroge 96.9 0.004 8.6E-08 64.2 9.4 79 110-190 9-97 (263)
229 PRK09242 tropinone reductase; 96.9 0.0067 1.5E-07 62.0 11.1 81 110-190 8-98 (257)
230 PRK06180 short chain dehydroge 96.9 0.005 1.1E-07 64.0 10.1 79 110-190 3-88 (277)
231 TIGR02853 spore_dpaA dipicolin 96.9 0.0081 1.8E-07 63.7 11.4 90 110-212 150-239 (287)
232 PRK07825 short chain dehydroge 96.9 0.0049 1.1E-07 63.7 9.5 81 110-190 4-88 (273)
233 PRK08415 enoyl-(acyl carrier p 96.9 0.014 3.1E-07 61.0 13.2 81 110-190 4-93 (274)
234 PRK06101 short chain dehydroge 96.9 0.017 3.7E-07 58.6 13.3 76 112-189 2-80 (240)
235 PRK07326 short chain dehydroge 96.8 0.01 2.2E-07 59.6 11.6 79 110-190 5-92 (237)
236 PRK07062 short chain dehydroge 96.8 0.0064 1.4E-07 62.5 10.0 81 110-190 7-97 (265)
237 PRK13943 protein-L-isoaspartat 96.8 0.0063 1.4E-07 65.6 10.2 98 105-212 76-179 (322)
238 COG2518 Pcm Protein-L-isoaspar 96.8 0.0032 7E-08 63.4 7.0 97 104-212 67-168 (209)
239 PRK07478 short chain dehydroge 96.8 0.0084 1.8E-07 61.2 10.3 81 110-190 5-93 (254)
240 PRK08177 short chain dehydroge 96.7 0.0072 1.6E-07 60.7 9.4 77 112-190 2-81 (225)
241 PRK05866 short chain dehydroge 96.7 0.01 2.2E-07 62.7 10.8 82 110-191 39-128 (293)
242 PRK05854 short chain dehydroge 96.7 0.0089 1.9E-07 63.7 10.5 81 110-190 13-103 (313)
243 PRK06196 oxidoreductase; Provi 96.7 0.0076 1.7E-07 64.1 9.9 81 110-190 25-109 (315)
244 PRK07231 fabG 3-ketoacyl-(acyl 96.7 0.0063 1.4E-07 61.5 8.8 79 110-190 4-91 (251)
245 TIGR01035 hemA glutamyl-tRNA r 96.7 0.008 1.7E-07 67.1 10.0 71 110-191 179-251 (417)
246 PRK05876 short chain dehydroge 96.7 0.0096 2.1E-07 62.1 10.0 81 110-190 5-93 (275)
247 TIGR01832 kduD 2-deoxy-D-gluco 96.7 0.01 2.2E-07 60.2 9.9 79 110-190 4-90 (248)
248 PRK13394 3-hydroxybutyrate deh 96.7 0.012 2.5E-07 60.1 10.4 81 110-190 6-94 (262)
249 PRK06194 hypothetical protein; 96.7 0.0085 1.8E-07 62.3 9.5 80 110-191 5-94 (287)
250 PRK06198 short chain dehydroge 96.7 0.0094 2E-07 60.9 9.7 79 110-190 5-94 (260)
251 PF02353 CMAS: Mycolic acid cy 96.6 0.0057 1.2E-07 64.4 8.2 103 99-213 52-166 (273)
252 PRK07890 short chain dehydroge 96.6 0.011 2.3E-07 60.4 10.0 79 110-190 4-92 (258)
253 TIGR02469 CbiT precorrin-6Y C5 96.6 0.014 3E-07 52.4 9.7 99 106-213 16-122 (124)
254 PRK07677 short chain dehydroge 96.6 0.008 1.7E-07 61.3 9.1 80 111-190 1-88 (252)
255 PRK07774 short chain dehydroge 96.6 0.0085 1.8E-07 60.8 9.2 81 110-190 5-93 (250)
256 PRK09186 flagellin modificatio 96.6 0.012 2.6E-07 59.8 10.3 78 110-189 3-92 (256)
257 PRK09291 short chain dehydroge 96.6 0.0096 2.1E-07 60.6 9.4 75 111-190 2-83 (257)
258 PRK06483 dihydromonapterin red 96.6 0.012 2.6E-07 59.4 10.0 80 111-190 2-84 (236)
259 PRK05653 fabG 3-ketoacyl-(acyl 96.6 0.013 2.9E-07 58.7 10.3 79 110-190 4-92 (246)
260 PRK07523 gluconate 5-dehydroge 96.6 0.0089 1.9E-07 61.0 9.1 81 110-190 9-97 (255)
261 PRK12481 2-deoxy-D-gluconate 3 96.6 0.013 2.8E-07 60.1 10.2 81 110-190 7-93 (251)
262 PRK06505 enoyl-(acyl carrier p 96.6 0.011 2.4E-07 61.7 9.8 81 110-190 6-95 (271)
263 PF01488 Shikimate_DH: Shikima 96.6 0.0073 1.6E-07 56.7 7.7 75 105-191 8-86 (135)
264 KOG1205|consensus 96.6 0.0051 1.1E-07 64.9 7.1 80 110-191 11-102 (282)
265 PRK07063 short chain dehydroge 96.6 0.0091 2E-07 61.2 9.0 81 110-190 6-96 (260)
266 KOG1201|consensus 96.5 0.008 1.7E-07 63.4 8.3 82 110-191 37-125 (300)
267 PRK08589 short chain dehydroge 96.5 0.011 2.4E-07 61.4 9.4 80 110-190 5-92 (272)
268 PRK07453 protochlorophyllide o 96.5 0.012 2.6E-07 62.7 10.0 80 110-189 5-92 (322)
269 CHL00194 ycf39 Ycf39; Provisio 96.5 0.015 3.3E-07 61.9 10.7 72 113-190 2-74 (317)
270 PRK08862 short chain dehydroge 96.5 0.013 2.9E-07 59.5 9.8 81 110-190 4-93 (227)
271 PRK07024 short chain dehydroge 96.5 0.012 2.7E-07 60.2 9.6 78 111-190 2-88 (257)
272 PRK12937 short chain dehydroge 96.5 0.038 8.2E-07 55.7 13.0 79 110-190 4-93 (245)
273 PRK08703 short chain dehydroge 96.5 0.013 2.9E-07 59.2 9.6 81 110-190 5-97 (239)
274 PRK08261 fabG 3-ketoacyl-(acyl 96.5 0.0034 7.3E-08 70.2 5.7 92 103-213 27-123 (450)
275 PLN02780 ketoreductase/ oxidor 96.5 0.013 2.8E-07 62.8 10.0 81 109-190 51-142 (320)
276 PRK07985 oxidoreductase; Provi 96.5 0.033 7.2E-07 58.8 12.9 81 110-190 48-138 (294)
277 PRK06701 short chain dehydroge 96.5 0.033 7.2E-07 58.6 12.9 81 110-190 45-134 (290)
278 PRK12367 short chain dehydroge 96.5 0.0099 2.2E-07 61.3 8.6 74 110-190 13-89 (245)
279 PRK07904 short chain dehydroge 96.5 0.013 2.7E-07 60.4 9.4 82 109-191 6-98 (253)
280 PRK06125 short chain dehydroge 96.5 0.019 4.2E-07 58.8 10.8 78 110-190 6-91 (259)
281 PF00670 AdoHcyase_NAD: S-aden 96.5 0.013 2.8E-07 57.0 8.7 90 109-213 21-110 (162)
282 PRK05867 short chain dehydroge 96.5 0.011 2.4E-07 60.4 8.9 81 110-190 8-96 (253)
283 COG2910 Putative NADH-flavin r 96.5 0.012 2.7E-07 58.0 8.6 91 113-213 2-104 (211)
284 PRK08264 short chain dehydroge 96.5 0.012 2.6E-07 59.2 9.0 77 110-190 5-83 (238)
285 PRK06172 short chain dehydroge 96.5 0.017 3.8E-07 58.8 10.2 81 110-190 6-94 (253)
286 PRK08213 gluconate 5-dehydroge 96.5 0.018 3.9E-07 58.9 10.3 79 110-190 11-99 (259)
287 COG2227 UbiG 2-polyprenyl-3-me 96.4 0.0098 2.1E-07 61.0 8.0 94 110-213 59-161 (243)
288 PRK06953 short chain dehydroge 96.4 0.018 3.9E-07 57.7 10.0 77 112-190 2-80 (222)
289 PRK07035 short chain dehydroge 96.4 0.013 2.8E-07 59.7 9.0 81 110-190 7-95 (252)
290 PLN02253 xanthoxin dehydrogena 96.4 0.016 3.4E-07 60.2 9.8 81 110-190 17-104 (280)
291 PRK06603 enoyl-(acyl carrier p 96.4 0.016 3.5E-07 59.8 9.8 81 110-190 7-96 (260)
292 PRK05717 oxidoreductase; Valid 96.4 0.018 4E-07 58.8 10.1 79 110-190 9-94 (255)
293 PRK07856 short chain dehydroge 96.4 0.013 2.7E-07 59.9 8.8 79 110-190 5-85 (252)
294 PRK08085 gluconate 5-dehydroge 96.4 0.022 4.7E-07 58.2 10.5 81 110-190 8-96 (254)
295 PRK06484 short chain dehydroge 96.4 0.016 3.4E-07 65.9 10.4 82 109-190 3-89 (520)
296 PF02826 2-Hacid_dh_C: D-isome 96.4 0.011 2.3E-07 58.1 7.9 89 110-212 35-126 (178)
297 PRK08226 short chain dehydroge 96.4 0.016 3.6E-07 59.3 9.6 81 110-190 5-92 (263)
298 PRK06114 short chain dehydroge 96.4 0.019 4.1E-07 58.8 10.0 81 110-190 7-96 (254)
299 PRK06181 short chain dehydroge 96.4 0.021 4.5E-07 58.5 10.2 79 111-191 1-89 (263)
300 PRK06463 fabG 3-ketoacyl-(acyl 96.4 0.022 4.7E-07 58.3 10.3 81 110-190 6-89 (255)
301 PRK09072 short chain dehydroge 96.4 0.019 4E-07 59.1 9.8 80 110-190 4-90 (263)
302 PRK05884 short chain dehydroge 96.4 0.019 4.2E-07 57.9 9.7 75 113-189 2-78 (223)
303 PRK06179 short chain dehydroge 96.4 0.01 2.2E-07 61.1 7.9 77 110-190 3-83 (270)
304 PRK08628 short chain dehydroge 96.4 0.019 4.2E-07 58.6 9.8 79 110-190 6-93 (258)
305 PRK08643 acetoin reductase; Va 96.4 0.013 2.9E-07 59.7 8.6 80 111-190 2-89 (256)
306 PRK12429 3-hydroxybutyrate deh 96.3 0.023 4.9E-07 57.7 10.3 81 110-190 3-91 (258)
307 PRK08263 short chain dehydroge 96.3 0.019 4.1E-07 59.6 9.8 81 111-191 3-88 (275)
308 PRK08251 short chain dehydroge 96.3 0.022 4.7E-07 57.8 10.0 78 111-190 2-91 (248)
309 PRK06138 short chain dehydroge 96.3 0.015 3.3E-07 58.9 8.8 81 110-190 4-91 (252)
310 PRK07454 short chain dehydroge 96.3 0.026 5.6E-07 57.0 10.5 80 109-190 4-93 (241)
311 KOG0725|consensus 96.3 0.022 4.7E-07 59.9 10.1 82 110-191 7-100 (270)
312 PRK06077 fabG 3-ketoacyl-(acyl 96.3 0.064 1.4E-06 54.3 13.2 81 110-190 5-94 (252)
313 PRK08993 2-deoxy-D-gluconate 3 96.3 0.021 4.6E-07 58.5 9.8 82 110-191 9-96 (253)
314 PRK05875 short chain dehydroge 96.3 0.022 4.7E-07 58.9 9.9 79 110-190 6-96 (276)
315 PRK06482 short chain dehydroge 96.3 0.021 4.5E-07 59.1 9.7 77 112-190 3-86 (276)
316 PRK08945 putative oxoacyl-(acy 96.3 0.018 3.8E-07 58.6 9.0 82 109-190 10-102 (247)
317 PRK08340 glucose-1-dehydrogena 96.3 0.02 4.4E-07 58.7 9.5 78 113-190 2-86 (259)
318 PRK07067 sorbitol dehydrogenas 96.3 0.021 4.5E-07 58.4 9.5 81 110-190 5-90 (257)
319 PRK06484 short chain dehydroge 96.3 0.021 4.7E-07 64.8 10.4 81 110-190 268-353 (520)
320 PRK12743 oxidoreductase; Provi 96.2 0.027 5.7E-07 57.7 10.1 80 111-190 2-90 (256)
321 KOG1014|consensus 96.2 0.028 6E-07 59.7 10.1 80 109-191 47-137 (312)
322 PRK12938 acetyacetyl-CoA reduc 96.2 0.018 3.9E-07 58.3 8.7 81 110-190 2-91 (246)
323 PRK06935 2-deoxy-D-gluconate 3 96.2 0.03 6.5E-07 57.4 10.3 80 110-190 14-101 (258)
324 PRK07102 short chain dehydroge 96.2 0.027 5.9E-07 57.1 9.9 77 112-190 2-86 (243)
325 PRK06523 short chain dehydroge 96.2 0.016 3.4E-07 59.3 8.2 78 110-190 8-87 (260)
326 PRK08303 short chain dehydroge 96.2 0.028 6.1E-07 59.9 10.3 80 110-189 7-105 (305)
327 PRK10538 malonic semialdehyde 96.2 0.024 5.3E-07 57.7 9.5 77 112-190 1-84 (248)
328 cd01078 NAD_bind_H4MPT_DH NADP 96.2 0.086 1.9E-06 52.2 13.0 77 110-192 27-109 (194)
329 PRK06124 gluconate 5-dehydroge 96.2 0.029 6.3E-07 57.2 10.0 81 110-190 10-98 (256)
330 PRK06398 aldose dehydrogenase; 96.2 0.007 1.5E-07 62.3 5.4 76 110-190 5-82 (258)
331 PRK06720 hypothetical protein; 96.1 0.042 9.1E-07 53.7 10.4 82 110-191 15-104 (169)
332 PRK07533 enoyl-(acyl carrier p 96.1 0.026 5.5E-07 58.2 9.5 81 110-190 9-98 (258)
333 PRK07097 gluconate 5-dehydroge 96.1 0.034 7.4E-07 57.2 10.4 81 110-190 9-97 (265)
334 PRK08277 D-mannonate oxidoredu 96.1 0.027 5.8E-07 58.4 9.6 81 110-190 9-97 (278)
335 PRK06197 short chain dehydroge 96.1 0.027 5.8E-07 59.5 9.6 81 110-190 15-105 (306)
336 PRK06914 short chain dehydroge 96.1 0.038 8.3E-07 57.2 10.5 79 110-190 2-91 (280)
337 COG1748 LYS9 Saccharopine dehy 96.1 0.033 7.1E-07 61.4 10.3 91 112-212 2-97 (389)
338 PRK07791 short chain dehydroge 96.1 0.036 7.9E-07 58.2 10.4 81 110-190 5-102 (286)
339 PF00106 adh_short: short chai 96.1 0.038 8.2E-07 52.3 9.5 80 112-191 1-91 (167)
340 PF05368 NmrA: NmrA-like famil 96.1 0.025 5.5E-07 57.2 8.8 88 114-207 1-94 (233)
341 cd01075 NAD_bind_Leu_Phe_Val_D 96.1 0.079 1.7E-06 53.2 12.2 95 110-211 27-136 (200)
342 cd04884 ACT_CBS C-terminal ACT 96.0 0.031 6.8E-07 46.3 7.7 63 264-327 2-66 (72)
343 PRK08278 short chain dehydroge 96.0 0.035 7.5E-07 57.7 9.9 81 110-190 5-100 (273)
344 TIGR03206 benzo_BadH 2-hydroxy 96.0 0.03 6.5E-07 56.6 9.2 79 110-190 2-90 (250)
345 PRK07402 precorrin-6B methylas 96.0 0.062 1.4E-06 53.3 11.2 100 106-213 37-142 (196)
346 TIGR01963 PHB_DH 3-hydroxybuty 96.0 0.023 5E-07 57.6 8.2 78 111-190 1-88 (255)
347 PRK12936 3-ketoacyl-(acyl-carr 96.0 0.033 7.1E-07 56.1 9.2 81 110-190 5-90 (245)
348 PRK08690 enoyl-(acyl carrier p 96.0 0.031 6.8E-07 57.7 9.2 82 110-191 5-95 (261)
349 PRK07775 short chain dehydroge 96.0 0.048 1E-06 56.6 10.6 80 110-191 9-98 (274)
350 PRK12384 sorbitol-6-phosphate 96.0 0.03 6.4E-07 57.3 8.9 78 111-190 2-91 (259)
351 COG2230 Cfa Cyclopropane fatty 95.9 0.027 5.9E-07 59.4 8.5 109 95-213 58-176 (283)
352 PLN02657 3,8-divinyl protochlo 95.9 0.04 8.7E-07 60.8 10.3 80 109-190 58-146 (390)
353 PRK03369 murD UDP-N-acetylmura 95.9 0.036 7.7E-07 63.1 10.1 89 109-211 10-98 (488)
354 PRK00107 gidB 16S rRNA methylt 95.9 0.04 8.6E-07 54.8 9.1 96 109-212 44-144 (187)
355 PRK07666 fabG 3-ketoacyl-(acyl 95.9 0.058 1.3E-06 54.4 10.5 80 110-191 6-95 (239)
356 PRK08063 enoyl-(acyl carrier p 95.9 0.052 1.1E-06 55.0 10.2 79 110-190 3-92 (250)
357 PRK12826 3-ketoacyl-(acyl-carr 95.9 0.045 9.6E-07 55.2 9.7 79 110-190 5-93 (251)
358 PRK07424 bifunctional sterol d 95.9 0.038 8.2E-07 61.5 9.7 75 110-190 177-255 (406)
359 TIGR01289 LPOR light-dependent 95.9 0.038 8.3E-07 58.9 9.5 80 111-190 3-91 (314)
360 PRK07074 short chain dehydroge 95.8 0.056 1.2E-06 55.2 10.2 79 111-191 2-88 (257)
361 PRK06113 7-alpha-hydroxysteroi 95.8 0.05 1.1E-06 55.6 9.9 79 110-190 10-98 (255)
362 PRK05650 short chain dehydroge 95.8 0.053 1.2E-06 56.0 10.1 78 113-190 2-87 (270)
363 PRK13942 protein-L-isoaspartat 95.8 0.04 8.7E-07 55.7 8.9 98 104-212 71-175 (212)
364 PRK09135 pteridine reductase; 95.8 0.055 1.2E-06 54.5 9.8 79 110-190 5-95 (249)
365 KOG1209|consensus 95.8 0.11 2.5E-06 52.4 11.6 104 110-213 6-138 (289)
366 PRK05557 fabG 3-ketoacyl-(acyl 95.8 0.065 1.4E-06 53.8 10.3 79 110-190 4-93 (248)
367 PRK05855 short chain dehydroge 95.8 0.046 9.9E-07 62.4 10.3 81 110-190 314-402 (582)
368 PRK05599 hypothetical protein; 95.8 0.052 1.1E-06 55.5 9.7 77 113-190 2-87 (246)
369 PRK13656 trans-2-enoyl-CoA red 95.7 0.064 1.4E-06 59.1 10.6 89 103-192 33-143 (398)
370 PRK07889 enoyl-(acyl carrier p 95.7 0.049 1.1E-06 56.1 9.4 81 110-190 6-95 (256)
371 PRK07370 enoyl-(acyl carrier p 95.7 0.047 1E-06 56.3 9.2 81 110-190 5-97 (258)
372 PRK00517 prmA ribosomal protei 95.7 0.073 1.6E-06 55.1 10.5 90 109-213 118-213 (250)
373 TIGR03840 TMPT_Se_Te thiopurin 95.7 0.034 7.3E-07 56.5 7.8 99 109-213 33-152 (213)
374 PF01135 PCMT: Protein-L-isoas 95.7 0.028 6.1E-07 56.9 7.2 96 106-212 69-171 (209)
375 PRK09134 short chain dehydroge 95.7 0.068 1.5E-06 54.7 10.2 81 110-190 8-97 (258)
376 PRK08416 7-alpha-hydroxysteroi 95.7 0.064 1.4E-06 55.1 10.0 80 110-189 7-96 (260)
377 PRK04148 hypothetical protein; 95.7 0.039 8.4E-07 52.0 7.5 97 109-210 15-129 (134)
378 TIGR00438 rrmJ cell division p 95.6 0.094 2E-06 51.7 10.6 99 105-213 28-146 (188)
379 PRK08159 enoyl-(acyl carrier p 95.6 0.063 1.4E-06 56.0 9.8 81 110-190 9-98 (272)
380 PRK07984 enoyl-(acyl carrier p 95.6 0.053 1.2E-06 56.3 9.2 81 110-190 5-94 (262)
381 cd04888 ACT_PheB-BS C-terminal 95.6 0.072 1.6E-06 44.1 8.1 72 263-335 2-76 (76)
382 PRK05565 fabG 3-ketoacyl-(acyl 95.6 0.045 9.8E-07 55.0 8.2 79 110-190 4-93 (247)
383 TIGR01829 AcAcCoA_reduct aceto 95.6 0.053 1.1E-06 54.5 8.7 79 112-190 1-88 (242)
384 PLN00141 Tic62-NAD(P)-related 95.5 0.059 1.3E-06 55.3 9.1 77 110-190 16-95 (251)
385 PRK07792 fabG 3-ketoacyl-(acyl 95.5 0.078 1.7E-06 56.3 10.3 81 110-191 11-100 (306)
386 PRK07069 short chain dehydroge 95.5 0.065 1.4E-06 54.2 9.2 79 113-191 1-90 (251)
387 TIGR00080 pimt protein-L-isoas 95.5 0.059 1.3E-06 54.4 8.8 97 105-212 73-176 (215)
388 PRK13944 protein-L-isoaspartat 95.5 0.053 1.1E-06 54.5 8.4 96 105-212 68-172 (205)
389 PRK07577 short chain dehydroge 95.4 0.048 1E-06 54.7 7.9 74 110-190 2-78 (234)
390 TIGR02415 23BDH acetoin reduct 95.4 0.098 2.1E-06 53.1 10.3 77 112-190 1-87 (254)
391 TIGR02632 RhaD_aldol-ADH rhamn 95.4 0.055 1.2E-06 64.1 9.6 79 110-190 413-503 (676)
392 PF13710 ACT_5: ACT domain; PD 95.4 0.072 1.6E-06 43.5 7.4 61 271-332 1-62 (63)
393 PRK06171 sorbitol-6-phosphate 95.4 0.04 8.7E-07 56.6 7.4 78 110-190 8-87 (266)
394 PRK08219 short chain dehydroge 95.4 0.097 2.1E-06 52.0 10.0 76 111-190 3-81 (227)
395 PF01262 AlaDh_PNT_C: Alanine 95.4 0.065 1.4E-06 52.1 8.4 51 110-161 19-69 (168)
396 PRK08594 enoyl-(acyl carrier p 95.4 0.065 1.4E-06 55.3 8.9 81 110-190 6-97 (257)
397 PRK12745 3-ketoacyl-(acyl-carr 95.4 0.09 2E-06 53.4 9.9 79 112-190 3-90 (256)
398 PRK08936 glucose-1-dehydrogena 95.4 0.11 2.4E-06 53.3 10.5 81 110-190 6-95 (261)
399 cd04882 ACT_Bt0572_2 C-termina 95.4 0.081 1.7E-06 42.2 7.5 58 265-327 3-60 (65)
400 PRK08642 fabG 3-ketoacyl-(acyl 95.4 0.096 2.1E-06 53.0 9.9 81 110-190 4-91 (253)
401 KOG1200|consensus 95.4 0.086 1.9E-06 52.6 8.9 81 111-191 14-101 (256)
402 PRK12935 acetoacetyl-CoA reduc 95.3 0.098 2.1E-06 52.9 9.8 81 110-190 5-94 (247)
403 PRK11036 putative S-adenosyl-L 95.2 0.12 2.6E-06 53.5 10.3 94 110-213 44-149 (255)
404 PRK12746 short chain dehydroge 95.2 0.11 2.4E-06 52.8 9.8 80 110-191 5-101 (254)
405 PLN02730 enoyl-[acyl-carrier-p 95.2 0.087 1.9E-06 56.3 9.2 38 110-148 8-47 (303)
406 PRK14967 putative methyltransf 95.2 0.18 3.9E-06 51.1 11.1 97 106-213 33-159 (223)
407 TIGR03649 ergot_EASG ergot alk 95.2 0.11 2.3E-06 54.2 9.7 95 113-212 1-103 (285)
408 PRK06997 enoyl-(acyl carrier p 95.1 0.1 2.2E-06 54.0 9.2 81 110-190 5-94 (260)
409 TIGR00406 prmA ribosomal prote 95.1 0.045 9.7E-07 58.0 6.7 96 109-213 158-259 (288)
410 PLN02896 cinnamyl-alcohol dehy 95.1 0.12 2.5E-06 55.9 10.0 76 109-190 8-89 (353)
411 PRK08220 2,3-dihydroxybenzoate 95.1 0.12 2.7E-06 52.3 9.6 77 110-191 7-87 (252)
412 PRK07201 short chain dehydroge 95.0 0.11 2.5E-06 60.7 10.5 81 110-190 370-458 (657)
413 cd04878 ACT_AHAS N-terminal AC 95.0 0.14 3.1E-06 41.0 8.2 66 263-330 2-68 (72)
414 PRK12744 short chain dehydroge 95.0 0.13 2.8E-06 52.6 9.7 81 110-190 7-99 (257)
415 PLN02986 cinnamyl-alcohol dehy 95.0 0.095 2.1E-06 55.6 8.9 41 109-149 3-43 (322)
416 PRK13255 thiopurine S-methyltr 95.0 0.068 1.5E-06 54.5 7.4 99 109-213 36-155 (218)
417 PRK12859 3-ketoacyl-(acyl-carr 95.0 0.15 3.2E-06 52.3 10.0 81 110-190 5-106 (256)
418 PRK13940 glutamyl-tRNA reducta 94.9 0.12 2.7E-06 57.6 9.8 75 105-191 177-253 (414)
419 TIGR02685 pter_reduc_Leis pter 94.9 0.12 2.6E-06 53.3 9.2 79 112-190 2-94 (267)
420 PRK09730 putative NAD(P)-bindi 94.9 0.15 3.3E-06 51.3 9.6 77 112-190 2-89 (247)
421 cd04874 ACT_Af1403 N-terminal 94.9 0.19 4.2E-06 40.4 8.5 64 263-329 2-65 (72)
422 PLN02989 cinnamyl-alcohol dehy 94.9 0.089 1.9E-06 55.9 8.2 76 109-190 3-87 (325)
423 PRK08317 hypothetical protein; 94.8 0.09 1.9E-06 52.7 7.8 103 103-213 13-124 (241)
424 PRK12825 fabG 3-ketoacyl-(acyl 94.8 0.17 3.6E-06 50.7 9.8 79 110-190 5-94 (249)
425 PRK06737 acetolactate synthase 94.8 0.18 4E-06 42.9 8.4 69 263-333 4-73 (76)
426 TIGR02622 CDP_4_6_dhtase CDP-g 94.8 0.091 2E-06 56.6 8.3 77 110-190 3-85 (349)
427 KOG1210|consensus 94.8 0.14 2.9E-06 54.6 9.2 81 109-191 31-123 (331)
428 PRK11207 tellurite resistance 94.8 0.12 2.6E-06 51.5 8.5 96 109-213 29-134 (197)
429 cd04885 ACT_ThrD-I Tandem C-te 94.8 0.093 2E-06 43.2 6.4 62 265-328 2-63 (68)
430 PRK07502 cyclohexadienyl dehyd 94.8 0.17 3.7E-06 53.9 10.1 92 111-213 6-100 (307)
431 PRK06947 glucose-1-dehydrogena 94.7 0.13 2.8E-06 52.1 8.7 77 112-190 3-90 (248)
432 PRK06123 short chain dehydroge 94.7 0.22 4.8E-06 50.3 10.4 79 111-191 2-91 (248)
433 PRK06300 enoyl-(acyl carrier p 94.7 0.32 6.9E-06 51.9 11.9 34 110-143 7-42 (299)
434 KOG1208|consensus 94.7 0.12 2.7E-06 55.5 8.7 81 110-190 34-124 (314)
435 PRK12747 short chain dehydroge 94.7 0.18 4E-06 51.3 9.7 81 110-190 3-98 (252)
436 COG2519 GCD14 tRNA(1-methylade 94.7 0.14 3E-06 53.1 8.6 100 105-213 90-195 (256)
437 PRK07041 short chain dehydroge 94.7 0.17 3.8E-06 50.5 9.3 73 115-190 1-79 (230)
438 PLN00015 protochlorophyllide r 94.6 0.12 2.7E-06 54.7 8.7 76 115-190 1-85 (308)
439 COG4122 Predicted O-methyltran 94.6 0.28 6E-06 50.1 10.7 99 109-212 58-165 (219)
440 PRK12824 acetoacetyl-CoA reduc 94.6 0.18 3.8E-06 50.7 9.4 79 112-190 3-90 (245)
441 PLN00016 RNA-binding protein; 94.6 0.19 4.1E-06 55.0 10.3 97 110-213 51-164 (378)
442 TIGR01124 ilvA_2Cterm threonin 94.6 1 2.2E-05 51.6 16.4 72 260-336 324-397 (499)
443 PLN02686 cinnamoyl-CoA reducta 94.6 0.17 3.8E-06 55.2 9.9 45 109-153 51-95 (367)
444 PF08704 GCD14: tRNA methyltra 94.6 0.073 1.6E-06 55.3 6.5 102 105-213 36-146 (247)
445 PRK08198 threonine dehydratase 94.6 0.8 1.7E-05 50.8 15.1 72 261-333 327-402 (404)
446 COG2226 UbiE Methylase involve 94.5 0.19 4.1E-06 52.0 9.2 102 103-213 45-156 (238)
447 TIGR01830 3oxo_ACP_reduc 3-oxo 94.5 0.17 3.7E-06 50.5 8.9 77 114-190 1-86 (239)
448 cd04887 ACT_MalLac-Enz ACT_Mal 94.5 0.13 2.9E-06 42.3 6.7 65 264-329 2-66 (74)
449 PRK12827 short chain dehydroge 94.5 0.26 5.7E-06 49.5 10.2 79 110-190 5-97 (249)
450 PLN02653 GDP-mannose 4,6-dehyd 94.5 0.15 3.2E-06 54.6 8.8 77 110-190 5-93 (340)
451 cd04883 ACT_AcuB C-terminal AC 94.5 0.22 4.9E-06 40.7 8.0 63 263-328 3-65 (72)
452 PRK07023 short chain dehydroge 94.5 0.21 4.5E-06 50.6 9.4 76 112-190 2-87 (243)
453 COG0686 Ald Alanine dehydrogen 94.4 0.16 3.4E-06 54.1 8.5 93 111-213 168-268 (371)
454 PRK01581 speE spermidine synth 94.4 0.34 7.3E-06 53.1 11.3 98 109-212 149-267 (374)
455 PRK06550 fabG 3-ketoacyl-(acyl 94.4 0.15 3.2E-06 51.2 8.0 74 110-190 4-77 (235)
456 TIGR01318 gltD_gamma_fam gluta 94.3 0.075 1.6E-06 60.1 6.5 79 109-192 139-238 (467)
457 PLN02781 Probable caffeoyl-CoA 94.3 0.3 6.4E-06 50.3 10.3 99 109-212 67-177 (234)
458 PF03435 Saccharop_dh: Sacchar 94.3 0.26 5.6E-06 54.2 10.4 88 114-211 1-96 (386)
459 PRK14103 trans-aconitate 2-met 94.3 0.38 8.3E-06 49.7 11.1 93 109-212 28-125 (255)
460 PLN02662 cinnamyl-alcohol dehy 94.3 0.12 2.5E-06 54.7 7.4 38 110-147 3-40 (322)
461 PRK06718 precorrin-2 dehydroge 94.3 0.8 1.7E-05 46.1 13.0 90 110-212 9-99 (202)
462 COG1052 LdhA Lactate dehydroge 94.2 0.43 9.2E-06 51.6 11.7 88 110-212 145-235 (324)
463 PLN02476 O-methyltransferase 94.2 0.3 6.4E-06 51.7 10.2 102 109-212 117-227 (278)
464 PRK11790 D-3-phosphoglycerate 94.2 4.7 0.0001 45.1 20.1 35 110-145 150-184 (409)
465 COG4492 PheB ACT domain-contai 94.2 0.21 4.5E-06 46.6 7.7 75 260-336 71-149 (150)
466 TIGR03589 PseB UDP-N-acetylglu 94.2 0.24 5.3E-06 53.0 9.7 75 110-190 3-84 (324)
467 COG1028 FabG Dehydrogenases wi 94.2 0.27 5.8E-06 49.9 9.6 81 110-190 4-96 (251)
468 TIGR03466 HpnA hopanoid-associ 94.2 0.097 2.1E-06 55.1 6.6 72 113-190 2-74 (328)
469 PRK04435 hypothetical protein; 94.1 0.29 6.4E-06 46.8 9.1 76 260-336 68-146 (147)
470 PRK12748 3-ketoacyl-(acyl-carr 94.1 0.28 6.2E-06 50.0 9.7 35 110-144 4-40 (256)
471 KOG1502|consensus 94.1 0.19 4.2E-06 54.0 8.5 74 110-189 5-87 (327)
472 PRK00811 spermidine synthase; 94.1 0.31 6.6E-06 51.6 10.0 99 109-212 75-190 (283)
473 PRK00258 aroE shikimate 5-dehy 94.1 0.2 4.4E-06 52.7 8.6 74 110-192 122-197 (278)
474 TIGR00138 gidB 16S rRNA methyl 94.1 0.24 5.2E-06 48.9 8.6 95 110-212 42-141 (181)
475 PRK12809 putative oxidoreducta 94.0 0.099 2.2E-06 61.5 6.7 77 110-191 309-406 (639)
476 PLN02427 UDP-apiose/xylose syn 94.0 0.27 5.8E-06 53.8 9.7 74 110-189 13-95 (386)
477 PLN02244 tocopherol O-methyltr 94.0 0.15 3.2E-06 55.4 7.5 99 109-213 117-223 (340)
478 TIGR01127 ilvA_1Cterm threonin 94.0 1.7 3.8E-05 47.7 16.1 68 261-329 305-376 (380)
479 PF02254 TrkA_N: TrkA-N domain 93.9 0.87 1.9E-05 40.8 11.4 93 114-212 1-95 (116)
480 cd02116 ACT ACT domains are co 93.9 0.23 5.1E-06 36.5 6.5 57 266-324 3-59 (60)
481 PRK12549 shikimate 5-dehydroge 93.8 0.43 9.3E-06 50.6 10.5 70 110-189 126-201 (284)
482 TIGR00477 tehB tellurite resis 93.8 0.12 2.6E-06 51.4 6.1 93 110-212 30-132 (195)
483 PF13291 ACT_4: ACT domain; PD 93.8 0.26 5.5E-06 41.6 7.2 67 261-329 6-74 (80)
484 TIGR01777 yfcH conserved hypot 93.8 0.046 1E-06 56.5 3.1 67 114-190 1-67 (292)
485 PLN02583 cinnamoyl-CoA reducta 93.8 0.33 7.1E-06 51.2 9.6 37 109-145 4-40 (297)
486 PRK11895 ilvH acetolactate syn 93.7 0.33 7.1E-06 47.3 8.6 70 263-334 4-74 (161)
487 PLN02214 cinnamoyl-CoA reducta 93.7 0.23 5.1E-06 53.5 8.5 75 110-190 9-91 (342)
488 TIGR00507 aroE shikimate 5-deh 93.7 0.36 7.7E-06 50.6 9.6 71 109-191 115-189 (270)
489 PRK07334 threonine dehydratase 93.6 1.6 3.5E-05 48.5 15.2 72 261-333 326-401 (403)
490 TIGR01472 gmd GDP-mannose 4,6- 93.6 0.29 6.3E-06 52.5 9.0 35 112-146 1-35 (343)
491 PF01596 Methyltransf_3: O-met 93.6 0.4 8.6E-06 48.5 9.3 101 110-212 45-154 (205)
492 KOG1203|consensus 93.5 0.27 5.8E-06 54.6 8.6 82 109-191 77-164 (411)
493 PRK06382 threonine dehydratase 93.5 2.9 6.3E-05 46.5 16.9 67 261-330 330-402 (406)
494 PRK07578 short chain dehydroge 93.5 0.26 5.7E-06 48.3 7.8 64 113-190 2-65 (199)
495 PLN00203 glutamyl-tRNA reducta 93.5 0.62 1.4E-05 53.5 11.8 74 110-191 265-340 (519)
496 PRK08655 prephenate dehydrogen 93.5 0.39 8.5E-06 54.0 10.0 89 113-213 2-92 (437)
497 PLN00198 anthocyanidin reducta 93.5 0.29 6.4E-06 52.3 8.8 38 110-147 8-45 (338)
498 PLN02366 spermidine synthase 93.4 0.38 8.3E-06 51.6 9.4 102 109-212 90-205 (308)
499 PRK05579 bifunctional phosphop 93.4 0.41 8.8E-06 53.3 9.9 76 110-191 187-278 (399)
500 PF13659 Methyltransf_26: Meth 93.4 0.59 1.3E-05 41.6 9.3 95 111-213 1-115 (117)
No 1
>KOG3820|consensus
Probab=100.00 E-value=5.5e-106 Score=832.36 Aligned_cols=355 Identities=54% Similarity=0.835 Sum_probs=334.2
Q ss_pred CeEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecC-CchHHHHHHHHHccCCcEEEecCCC
Q psy14589 260 LFDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAP-GGDLSSVIESLRSSCSYINIISRNH 338 (655)
Q Consensus 260 ~ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg-~~~v~~~l~~L~~~~~~v~iLGs~~ 338 (655)
..++++|++++ ++|+|+++|++|+..++|+.||||||++....+|++||++++ ..++.++++.|++.+..+....+.+
T Consensus 35 ~~~~~if~~r~-~~~~l~~~Lk~f~~~~vnl~HiEsR~s~~~~~~~evlv~~~~~~~~l~~~i~~lrq~~~~~~~~s~~~ 113 (461)
T KOG3820|consen 35 ARISLIFSLRN-KVGALARALKAFEEFHVNLLHIESRPSERRSSGYEVLVELDATRGQLIQAIELLRQNHVALSYFSSFN 113 (461)
T ss_pred ceEEEEEEecc-cchHHHHHHHHhhhcCceEEEeecccccccCCCceEEEeeccchhhHHHHHHHHHHhcccceecccch
Confidence 36789999999 899999999999999999999999999999999999999999 7899999999999986555554443
Q ss_pred C-----CCCCCcCcccccchhhhhhhhhhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCC--------------
Q psy14589 339 N-----QFHGVPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHSIL-------------- 399 (655)
Q Consensus 339 ~-----~~~~vpWfPr~~~dLD~~~~~~l~~~~~l~~dhpgf~D~~y~~rR~~ia~ia~~~k~g~~-------------- 399 (655)
. .+.++|||||+|+|||+|+|+|+|||++||+|||||+|++||+||+++|+||.|||||||
T Consensus 114 ~~~~~~~~~~vpWFPr~IsdLD~can~vl~Yg~eLDadHPGFkD~vYR~RRk~fadiA~nyKhGdpIP~veYT~eEikTW 193 (461)
T KOG3820|consen 114 RDLKDNKNTSVPWFPRKISDLDQCANRVLKYGPELDADHPGFKDPVYRQRRKFFADIAFNYKHGDPIPRVEYTEEEIKTW 193 (461)
T ss_pred hhhhhccCCCCCccccchhHHHHHHHHHhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcccCCCCCccccCHHHHHHH
Confidence 2 247899999999999999999999999999999999999999999999999999999998
Q ss_pred --------------cchhHHhhhhHHHHhcCCCCCCCCChHHHHHhhhhccCceEEecCCCCChHHHHHhhhcCccceee
Q psy14589 400 --------------LMPEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQ 465 (655)
Q Consensus 400 --------------Ac~ey~~g~~~l~~~~g~~~~~Ip~~~~~~~~l~~~tg~~~~~v~g~~~~~~f~~~la~r~f~~t~ 465 (655)
||+||+++|++|+++|||.+|+||||+|||+|||++|||++|||+||+|+|||+++||||||+|||
T Consensus 194 g~Vf~~L~~Ly~~HAC~ey~~~f~lLe~~cg~~ednIPQLeDVs~FLk~~TGF~lRPvAGlLSaRDFLagLAFRVFhcTQ 273 (461)
T KOG3820|consen 194 GTVFRTLTDLYPTHACAEYLDNFPLLEKYCGYREDNIPQLEDVSKFLKKKTGFRLRPVAGLLSARDFLAGLAFRVFHCTQ 273 (461)
T ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCcCCCCcchHHHHHHHHHhccCceeecccccCcHHHHHhhhhhhheeeee
Confidence 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccCCCCCCCCCCchhhhhhcCCCCccCChhHHHHHHHHhhhcCCCChHHHHHHHhhhhhhhhhhhccCCCCCCCCeEee
Q psy14589 466 YIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTGFSLRP 545 (655)
Q Consensus 466 ~ir~~~~~~y~~epd~~He~~gh~p~l~~~~~a~~~~~~Gl~~l~~~~~~i~~l~~l~w~tve~gl~~~~~~~tg~~~~~ 545 (655)
||||+++|+||||||+|||++||||||+||.||||+|+|||++||+|+|+|++|+++||||||||||++. +++|+
T Consensus 274 YiRH~s~P~yTPEPD~cHELLGHvPLfADp~FAQFSQEIGLASLGAsDe~IEKLaTlywFtVEFGLCkq~-----g~~Ka 348 (461)
T KOG3820|consen 274 YIRHHSSPFYTPEPDTCHELLGHVPLFADPSFAQFSQEIGLASLGASDEDIEKLATLYWFTVEFGLCKQD-----GELKA 348 (461)
T ss_pred eeecCCCCCCCCCCchHHHHhccchhccChhHHHHhHHhhhhhcCCCHHHHHHhheeeEEEEEEeeeccC-----Ceeee
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred -cccccCCHHHHHhhhc-----ccc-----cccccccCCCCCCCCCCcchhhhhcCCcccccCchHHHHHHHHhhcccCC
Q psy14589 546 -VAGLLSSRDFLAGLAF-----RVF-----HSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGA 614 (655)
Q Consensus 546 -g~Gllss~~~~~~l~~-----~~f-----~~~~~ir~~~~~~y~~~pd~~hd~~ghvp~l~~p~f~~~~~~~g~~~~~a 614 (655)
|||||||.||+.|+.. +.| +++.|+.+.+|+.|.. .|.|||....+. .|...| ++
T Consensus 349 yGAGLLSS~gEL~hals~~pei~~FdP~vt~vq~y~it~yQp~Yfv-aeSFedAk~KlR--------~fa~ti-----~R 414 (461)
T KOG3820|consen 349 YGAGLLSSYGELQHALSDKPEIKDFDPEVTAVQKYLITTYQPLYFV-AESFEDAKEKLR--------KFASTI-----KR 414 (461)
T ss_pred echhhhhhHHHHHHHhcCCccccCCCccceeeeeccccccccceee-hhhHHHHHHHHH--------HHHHhC-----CC
Confidence 9999999999999975 455 6778999999999999 699999987776 555554 99
Q ss_pred ceEEEeecccccCccccccCch
Q psy14589 615 PYLFYYVCHELLGHVPLFADPS 636 (655)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~ 636 (655)
||.|+| +|+|++|-|+|+..
T Consensus 415 PF~Vry--npyT~svEvLds~~ 434 (461)
T KOG3820|consen 415 PFSVRY--NPYTQSVEVLDSSA 434 (461)
T ss_pred Cceeee--ccccceehhhcCHH
Confidence 999999 99999999999863
No 2
>TIGR01268 Phe4hydrox_tetr phenylalanine-4-hydroxylase, tetrameric form. The member of this family from Drosophila has been described as having both phenylalanine-4-hydroxylase and tryptophan 5-monoxygenase activity (PubMed:1371286). However, a Drosophila member of the tryptophan 5-monoxygenase clade has subsequently been discovered.
Probab=100.00 E-value=4.7e-102 Score=834.74 Aligned_cols=354 Identities=58% Similarity=0.898 Sum_probs=324.5
Q ss_pred CeEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecC--CchHHHHHHHHHccC-CcEEEecC
Q psy14589 260 LFDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAP--GGDLSSVIESLRSSC-SYINIISR 336 (655)
Q Consensus 260 ~ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg--~~~v~~~l~~L~~~~-~~v~iLGs 336 (655)
+|+|++|++++ ++|+|+++|+.|++++|||+||||||++..+|+|.|||||++ ++++++++++|++.+ ..++++|+
T Consensus 15 ~KTSLiFsL~d-~pGaL~~vL~vFa~~gINLthIESRPsk~~~~eY~FFVD~eg~~~~~v~~aL~~Lk~~~~~~vkiLGs 93 (436)
T TIGR01268 15 AKTSLIFSLKE-EAGALAETLKLFQAHDVNLTHIESRPSKTHPGEYEFFVEFDEASDRKLEGVIEHLRQKAEVTVNILSR 93 (436)
T ss_pred CeEEEEEEcCC-CCcHHHHHHHHHHHCCCCeeEEecccCCCCCccEEEEEEEecCccHHHHHHHHHHHHhccceEEEeCC
Confidence 38999999998 899999999999999999999999999999999999999999 589999999999999 89999999
Q ss_pred CCCCC-CCCcCcccccchhhhhhhhhhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCC----------------
Q psy14589 337 NHNQF-HGVPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHSIL---------------- 399 (655)
Q Consensus 337 ~~~~~-~~vpWfPr~~~dLD~~~~~~l~~~~~l~~dhpgf~D~~y~~rR~~ia~ia~~~k~g~~---------------- 399 (655)
+++.+ ..||||||||+|||+|+|++|+||+||++|||||+|++||+||++||++|.+||+|++
T Consensus 94 ~~~~~~~~vpWFPr~isDLD~~~~~vl~yg~~l~~dHPgf~d~~yr~rr~~~a~~a~~y~~g~~ip~v~YT~~e~~~W~~ 173 (436)
T TIGR01268 94 DNKQNKDSVPWFPRKINDIDRFANQILSYGAELDADHPGFKDPVYRARRKQFADIAFNYKHGQPIPRVEYTDEEIATWRT 173 (436)
T ss_pred CCcccccCCCCCCCCHHHHHHHhhhhhhccCcccccCcCccCHHHHHHHHHHHHHHhhCCCCCCCCccccCHHHHHHHHH
Confidence 65432 3499999999999999999999999999999999999999999999999999999997
Q ss_pred ------------cchhHHhhhhHHHHhcCCCCCCCCChHHHHHhhhhccCceEEecCCCCChHHHHHhhhcCccceeeec
Q psy14589 400 ------------LMPEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYI 467 (655)
Q Consensus 400 ------------Ac~ey~~g~~~l~~~~g~~~~~Ip~~~~~~~~l~~~tg~~~~~v~g~~~~~~f~~~la~r~f~~t~~i 467 (655)
||++|++|+++|+++||+++|+||||+|||++|+++|||+++||+||||+|+||++||+|+|||||||
T Consensus 174 l~~~~~~l~~~~Ac~eyl~~l~~L~~~~g~~~d~IPql~dvs~~L~~~TGw~~~pV~Gll~~~~F~~~LA~r~F~~t~yi 253 (436)
T TIGR01268 174 VFNNLTVLYPTHACQEYNHIFPLLQQNCGFREDNIPQLEDVSQFLQDCTGFTLRPVAGLLSSRDFLAGLAFRVFHSTQYI 253 (436)
T ss_pred HHHHHHHHhhccccHHHHHHHHHHHHhcCCCccCCCCHHHHHHHHHhccCCEEEecCCcCCHHHHHHHHhcCccceeeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCchhhhhhcCCCCccCChhHHHHHHHHhhhcCCCChHHHHHHHhhhhhhhhhhhccCCCCCCCCeEee-c
Q psy14589 468 RHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTGFSLRP-V 546 (655)
Q Consensus 468 r~~~~~~y~~epd~~He~~gh~p~l~~~~~a~~~~~~Gl~~l~~~~~~i~~l~~l~w~tve~gl~~~~~~~tg~~~~~-g 546 (655)
||+++|+||||||||||++||+|||+||+||+|+|++|++++|+++++|.+|+||||||||||||+++ +++|+ |
T Consensus 254 R~~~~~~YtpEPDi~Hel~GHvPlla~p~fA~f~q~~G~~~l~a~~~~i~~LarlyWfTVEFGL~~~~-----~~~k~YG 328 (436)
T TIGR01268 254 RHHSKPMYTPEPDICHELLGHVPLFADVEFAQFSQEIGLASLGAPDDYIEKLATLYWFTIEFGLCKQD-----GEKKAYG 328 (436)
T ss_pred cccccccCCCCChhHHHHhccchhhCCHHHHHHHHHHHHhhcCCCHHHHHHHhhhheeeeccceecCC-----CceeEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999 99999 9
Q ss_pred ccccCCHHHHHhhhc-----ccccccc-----cccCCCCCCCCCCcchhhhhcCCcccccCchHHHHHHHHh--hcccCC
Q psy14589 547 AGLLSSRDFLAGLAF-----RVFHSTQ-----YIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIG--LASLGA 614 (655)
Q Consensus 547 ~Gllss~~~~~~l~~-----~~f~~~~-----~ir~~~~~~y~~~pd~~hd~~ghvp~l~~p~f~~~~~~~g--~~~~~a 614 (655)
||||||.+|++|+.. +.|-... |..+..|+.|.. -++|.+..+.++ ...++.
T Consensus 329 AGlLSS~gE~~~~ls~~~~~~~fd~~~~~~~~y~i~~~Q~~YFv----------------~~sf~~l~~~~~~~~~~~~~ 392 (436)
T TIGR01268 329 AGLLSSFGELQYCLSDKPEVVDFDPEVTCVTKYPITEFQPLYFL----------------AESFEDAKEKLKSFAATIPR 392 (436)
T ss_pred cchhcCHHHHHHhcCCCCccCCCCHHHHhcCCCCCCCcCCceEE----------------eCCHHHHHHHHHHHHHhCCC
Confidence 999999999999842 4453333 444444555555 444444445443 244689
Q ss_pred ceEEEeecccccCccccccCchh
Q psy14589 615 PYLFYYVCHELLGHVPLFADPSF 637 (655)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~ 637 (655)
||.++| |++|++|-|+|++.-
T Consensus 393 pf~~~y--~~~t~~v~~~~~~~~ 413 (436)
T TIGR01268 393 PFSVRY--NAYTQRVEILDKKAQ 413 (436)
T ss_pred Ccccee--cCccceEEecCCHHH
Confidence 999999 999999999999864
No 3
>TIGR01270 Trp_5_monoox tryptophan 5-monooxygenase, tetrameric. This model describes tryptophan 5-monooxygenase, a member of the family of tetrameric, biopterin-dependent aromatic amino acid hydroxylases found in metazoans. It is closely related to tetrameric phenylalanine-4-hydroxylase and tyrosine 3-monooxygenase, and more distantly related to the monomeric phenylalanine-4-hydroxylase found in some Gram-negative bacteria.
Probab=100.00 E-value=1.2e-99 Score=817.12 Aligned_cols=357 Identities=46% Similarity=0.722 Sum_probs=321.2
Q ss_pred CCCCeEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcc-eEEEEEecC-CchHHHHHHHHHccCCcEEEe
Q psy14589 257 PFSLFDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENN-YEFMVECAP-GGDLSSVIESLRSSCSYINII 334 (655)
Q Consensus 257 ~~~~ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~-Y~FfVd~eg-~~~v~~~l~~L~~~~~~v~iL 334 (655)
...+++||+|++++ ++|+|+++|+.|++++|||+||||||++...|+ |.|||||++ ..++++++++|++.+..+++.
T Consensus 27 ~~~~ktSLIFsL~d-~pGaL~~vL~vFa~~gINLThIESRPsk~~~~e~Y~FfVD~Eg~~~~l~~aL~~Lk~~~~~~~~~ 105 (464)
T TIGR01270 27 EGVQRLSIIFSLSN-VVGDLSKAIAIFQDRHINILHLESRDSKDGTSKTMDVLVDVELFHYGLQEAMDLLKSGLDVHEVS 105 (464)
T ss_pred CCCceEEEEEECCC-CchHHHHHHHHHHHCCCCEEEEECCcCCCCCCccEEEEEEEEcCHHHHHHHHHHHHHhcccceec
Confidence 34459999999999 899999999999999999999999999999999 999999999 778999999999998875553
Q ss_pred cCCC--------------CCCCCCcCcccccchhhhhhhhhhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCC-
Q psy14589 335 SRNH--------------NQFHGVPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHSIL- 399 (655)
Q Consensus 335 Gs~~--------------~~~~~vpWfPr~~~dLD~~~~~~l~~~~~l~~dhpgf~D~~y~~rR~~ia~ia~~~k~g~~- 399 (655)
..+. ...++||||||+|+|||+|+|++|+||++|++|||||+|++||+||++||++|.+||+|++
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~vpWfPr~isdLD~~~~~vl~~~~~l~~dhpgf~d~~yr~rr~~~a~~a~~y~~g~~i 185 (464)
T TIGR01270 106 SPIRPTLIEAQYTEPGSDDATTGVPWFPKKISDLDKCANRVLMYGSELDADHPGFKDTEYRKRRMMFADLALNYKHGEPI 185 (464)
T ss_pred cccccccccccccccccccccCCCCCCCCCHHHHHHhhhhheeccCcccccCCCCcCHHHHHHHHHHHHHHHhccCCCCC
Confidence 1100 0245699999999999999999999999999999999999999999999999999999987
Q ss_pred ---------------------------cchhHHhhhhHHHHhcCCCCCCCCChHHHHHhhhhccCceEEecCCCCChHHH
Q psy14589 400 ---------------------------LMPEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDF 452 (655)
Q Consensus 400 ---------------------------Ac~ey~~g~~~l~~~~g~~~~~Ip~~~~~~~~l~~~tg~~~~~v~g~~~~~~f 452 (655)
||++|++|+++|+++||+++|+||||+|||++|+++|||+++||+||||+|+|
T Consensus 186 p~v~YT~~E~~~W~~l~~~~~~l~~~~Ac~eyl~gl~~L~~~~g~~~d~IPql~dvs~~L~~~TGw~~~pV~Gll~~r~F 265 (464)
T TIGR01270 186 PRVEYTEEERKTWGTIYRELRRLYKTHACKEFLDNLPLLEKYCGYREDNIPQLEDVSKFLKAKTGFRLRPVAGYLSARDF 265 (464)
T ss_pred CccccCHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHhhcCCCccCCCCHHHHHHHHHhccCCEEEeccccCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhcCccceeeeccCCCCCCCCCCchhhhhhcCCCCccCChhHHHHHHHHhhhcCCCChHHHHHHHhhhhhhhhhhhc
Q psy14589 453 LAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLA 532 (655)
Q Consensus 453 ~~~la~r~f~~t~~ir~~~~~~y~~epd~~He~~gh~p~l~~~~~a~~~~~~Gl~~l~~~~~~i~~l~~l~w~tve~gl~ 532 (655)
|++||+|+|||||||||+++|+||||||||||++||||||+||+||+|+|++|++++|+++++|.+|+||||||||||||
T Consensus 266 ~~~LA~R~F~~tqyIR~~~~~~YtpEPDi~HEl~GHvPlLadp~FA~f~q~~G~~sl~a~~e~i~~LarlyWfTVEFGLi 345 (464)
T TIGR01270 266 LSGLAFRVFHCTQYVRHSADPFYTPEPDTCHELLGHMPLLADPSFAQFSQEIGLASLGASEEDIKKLATLYFFTIEFGLC 345 (464)
T ss_pred HHHHhcCccceeeeeccccccCcCCCCchHHHHhcccchhcCHHHHHHHHHHHHhhcCCCHHHHHHHhHhhhhhhhccce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cC-CCCCCCCeEee-cccccCCHHHHHhhhc-----ccccccc-----cccCCCCCCCCCCcchhhhhcCCcccccCchH
Q psy14589 533 SL-SPDSTGFSLRP-VAGLLSSRDFLAGLAF-----RVFHSTQ-----YIRHPSKPLYTPEPDVCHELLGHVPLFADPSF 600 (655)
Q Consensus 533 ~~-~~~~tg~~~~~-g~Gllss~~~~~~l~~-----~~f~~~~-----~ir~~~~~~y~~~pd~~hd~~ghvp~l~~p~f 600 (655)
++ + +++|+ |||||||.||++|... +.|-... |..+..|+.|.. -++|
T Consensus 346 ~e~~-----g~lkaYGAGlLSS~gEl~~~ls~~~~~~pfd~~~~~~~~Y~i~~~Qp~YFv----------------~~Sf 404 (464)
T TIGR01270 346 KQDD-----EQFKVYGAGLLSSVAELQHALSGSAKIKPFDPDRVCEQECLITTFQNAYFY----------------TRSF 404 (464)
T ss_pred ecCC-----CCeEEeeceeeCCHHHHHHHccCCCccCCCCHHHHhcCCCCCCCcccceEE----------------eCCH
Confidence 99 8 89999 9999999999999843 4443333 444444444544 4455
Q ss_pred HHHHHHHh--hcccCCceEEEeecccccCccccccCchh
Q psy14589 601 AQFSQEIG--LASLGAPYLFYYVCHELLGHVPLFADPSF 637 (655)
Q Consensus 601 ~~~~~~~g--~~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 637 (655)
.+..+.++ ...+++||.++| |++|++|-|+|++.-
T Consensus 405 e~l~~~l~~f~~~~~rpf~~~y--~p~t~~v~vl~~~~~ 441 (464)
T TIGR01270 405 EEAKEKMREFTNTIKRPFGVRY--NPYTESVEVLKNSKS 441 (464)
T ss_pred HHHHHHHHHHHHhcCCCccceE--cCccceEEeeCCHHH
Confidence 55555553 245689999999 999999999999853
No 4
>TIGR01269 Tyr_3_monoox tyrosine 3-monooxygenase, tetrameric. This model describes tyrosine 3-monooxygenase, a member of the family of tetrameric, biopterin-dependent aromatic amino acid hydroxylases found in metazoans. It is closely related to tetrameric phenylalanine-4-hydroxylase and tryptophan 5-monooxygenase, and more distantly related to the monomeric phenylalanine-4-hydroxylase found in some Gram-negative bacteria.
Probab=100.00 E-value=2.7e-97 Score=788.66 Aligned_cols=356 Identities=40% Similarity=0.627 Sum_probs=316.3
Q ss_pred eEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCC---cceEEEEEecC-CchHHHHHHHHHccCCcE--EEe
Q psy14589 261 FDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIE---NNYEFMVECAP-GGDLSSVIESLRSSCSYI--NII 334 (655)
Q Consensus 261 ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~---~~Y~FfVd~eg-~~~v~~~l~~L~~~~~~v--~iL 334 (655)
.+++.|+++..+.|+|+++|++|++++||++||||||++... .+|+|||||++ +.++.++++.|++.+... .+.
T Consensus 37 ~~~~~~~~~~~~~g~L~~~l~~f~~~~inl~hiEsr~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 116 (457)
T TIGR01269 37 MQNNQFYIRTKEISSLHRILKYIETFKLNLVHFETRPTRTLSNADVDYSCLITLEANEINMSLLIESLRGNSFISGINLL 116 (457)
T ss_pred ceeEEEEeccCcchhHHHHHHHHHHcCCcEEEeecCCccccCCCCCceEEEEEEeccHhhHHHHHHHHHhhhcccccccc
Confidence 567788888745999999999999999999999999998776 78999999999 888999999999876533 333
Q ss_pred cCCCCCCCCCcCcccccchhhhhhhhhhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCC---------------
Q psy14589 335 SRNHNQFHGVPWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHSIL--------------- 399 (655)
Q Consensus 335 Gs~~~~~~~vpWfPr~~~dLD~~~~~~l~~~~~l~~dhpgf~D~~y~~rR~~ia~ia~~~k~g~~--------------- 399 (655)
++ .+.+||||||+|+|||+|+|++|+||++|++|||||+|++||+||++||++|++||+|++
T Consensus 117 ~~---~~~~vpWfPr~isdLD~~~~~~l~~g~~l~~dhPgf~d~~yr~RR~~~a~~a~~~~~g~~iP~v~YT~eE~~tW~ 193 (457)
T TIGR01269 117 NN---QNVKEDWFPKHISELDKCQHLLTKFQPDLDTDHPGFHDKVYRQRREAIAEIAFQYKYGDPIPEVEYTKEEIETWR 193 (457)
T ss_pred CC---ccccCCCCCCcHHHHHHhhhhhhccCCccccCCCCCCCHHHHHHHHHHHHHhhhccCCCCCCcCccCHHHHHHHH
Confidence 22 346799999999999999999999999999999999999999999999999999999997
Q ss_pred -------------cchhHHhhhhHHHHhcCCCCCCCCChHHHHHhhhhccCceEEecCCCCChHHHHHhhhcCccceeee
Q psy14589 400 -------------LMPEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQY 466 (655)
Q Consensus 400 -------------Ac~ey~~g~~~l~~~~g~~~~~Ip~~~~~~~~l~~~tg~~~~~v~g~~~~~~f~~~la~r~f~~t~~ 466 (655)
||++|++|+++|+++||+++|+||||+|||++|+++|||+++||+||||+|+||++||+|+||||||
T Consensus 194 ~l~~rl~~l~~~~Ac~eyl~gl~~L~~~~gl~~d~IPqL~dvs~~L~~~TGw~l~pV~GLl~~rdF~~~LA~RvFp~Tqy 273 (457)
T TIGR01269 194 LVFTTMKDLHASHACREYIDAFQLLEKYCNYNSESIPQLQTISEFLHRTTGFRLRPVAGLLSARDFLASLAFRVFQCTQY 273 (457)
T ss_pred HHHHHHHHHhhhhhhHHHHHHHHHHHhhcCCCcCCCCCHHHHHHHHHhccCCEEEeccccCCHHHHHHHHhcCcccceee
Confidence 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCchhhhhhcCCCCccCChhHHHHHHHHhhhcCCCChHHHHHHHhhhhhhhhhhhccCCCCCCCCeEee-
Q psy14589 467 IRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTGFSLRP- 545 (655)
Q Consensus 467 ir~~~~~~y~~epd~~He~~gh~p~l~~~~~a~~~~~~Gl~~l~~~~~~i~~l~~l~w~tve~gl~~~~~~~tg~~~~~- 545 (655)
|||+++|+||||||||||++||||||+||+||+|+|++|++++|+++++|.+|+||||||||||||+++ +++||
T Consensus 274 IR~~~~~~YtpEPDi~HEl~GHvPlLadp~FA~F~q~~G~asl~As~e~i~~LarlYWfTVEFGLi~e~-----g~lKaY 348 (457)
T TIGR01269 274 IRHHSSPMHTPEPDCIHELLGHMPMLADRQFAQFSQEIGLASLGASEEEIEKLSTLYWFTVEFGLCKEN-----GETKAY 348 (457)
T ss_pred ecCccccCCCCCCchHHHHhcccccccCHHHHHHHHHHHHHhcCCCHHHHHHHhHhHhhhhhcccccCC-----CceeEe
Confidence 999999999999999999999999999999999999999999999999999999999999999999999 99999
Q ss_pred cccccCCHHHHHhhhc-----ccccccccccCCCCCCCCCCcchhhhhcCCcccccCchHHHHHHHHh--hcccCCceEE
Q psy14589 546 VAGLLSSRDFLAGLAF-----RVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIG--LASLGAPYLF 618 (655)
Q Consensus 546 g~Gllss~~~~~~l~~-----~~f~~~~~ir~~~~~~y~~~pd~~hd~~ghvp~l~~p~f~~~~~~~g--~~~~~a~~~~ 618 (655)
|||||||.+|+.|... +.|-...-+|+++.++-.+ + -++.-++|.+..+.++ ...++.||.+
T Consensus 349 GAGLLSS~GEl~~als~~p~~~pfdp~~~~~t~Y~I~~~Q------p-----~YFV~eSfe~l~~~l~~f~~~~~rPf~v 417 (457)
T TIGR01269 349 GAGLLSSYGELEHAFSDLSEKRPFNPNDAAVQPYQDQGYQ------K-----IYFVTESFEDAKRKLRNYINTSGRPFIV 417 (457)
T ss_pred eceeecCHHHHHHHcCCCCccCCCCHHHHhcCCCCCCCcC------C-----ceEEeCCHHHHHHHHHHHHHhCCCCcce
Confidence 9999999999999853 3443333344444432222 1 1344455555555555 2457999999
Q ss_pred EeecccccCccccccCchh
Q psy14589 619 YYVCHELLGHVPLFADPSF 637 (655)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~ 637 (655)
+| |++|++|-|+|+++-
T Consensus 418 ~y--~pyt~svevl~~~~~ 434 (457)
T TIGR01269 418 RF--DPITETVEVLDRFSK 434 (457)
T ss_pred ee--cCccceEEEeCCHHH
Confidence 99 999999999999863
No 5
>PF00351 Biopterin_H: Biopterin-dependent aromatic amino acid hydroxylase; InterPro: IPR019774 Phenylalanine, tyrosine and tryptophan hydroxylases constitute a family of tetrahydrobiopterin-dependent aromatic amino acid hydroxylases, all of which are rate-limiting catalysts for important metabolic pathways []. The proteins are structurally and functionally related, each containing iron, and catalysing ring hydroxylation of aromatic amino acids, using tetra-hydrobiopterin (BH4) as a substrate. All are regulated by phosphorylation at serines in their N-termini. It has been suggested that the proteins each contain a conserved C-terminal catalytic (C) domain and an unrelated N-terminal regulatory (R) domain. It is possible that the R domains arose from genes that were recruited from different sources to combine with the common gene for the catalytic core. Thus, by combining with the same C domain, the proteins acquired the unique regulatory properties of the separate R domains. A variety of enzymes belong to this family that includes, phenylalanine-4-hydroxylase from Chromobacterium violaceum where it is copper-dependent; it is iron-dependent in Pseudomonas aeruginosa, phenylalanine-4-hydroxylase catalyzes the conversion of phenylalanine to tyrosine. In humans, deficiencies are the cause of phenylketonuria, the most common inborn error of amino acid metabolism [], tryptophan 5-hydroxylase catalyzes the rate-limiting step in serotonin biosynthesis: the conversion of tryptophan to 3-hydroxy-anthranilate and tyrosine 3-hydroxylase catalyzes the rate limiting step in catecholamine biosynthesis: the conversion of tyrosine to 3,4-dihydroxy-L-phenylalanine.; GO: 0016714 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced pteridine as one donor, and incorporation of one atom of oxygen, 0055114 oxidation-reduction process; PDB: 1PHZ_A 2PHM_A 2V28_A 2V27_A 1PAH_A 1DMW_A 1TG2_A 1KW0_A 1MMT_A 1TDW_A ....
Probab=100.00 E-value=4e-87 Score=691.81 Aligned_cols=271 Identities=53% Similarity=0.850 Sum_probs=220.1
Q ss_pred cCcccccchhhhhhhhhhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCC-------------------------
Q psy14589 345 PWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHSIL------------------------- 399 (655)
Q Consensus 345 pWfPr~~~dLD~~~~~~l~~~~~l~~dhpgf~D~~y~~rR~~ia~ia~~~k~g~~------------------------- 399 (655)
|||||+|+|||+|+|++|+||++|++|||||+|++||+||++||++|++||+||+
T Consensus 1 pwfp~~i~dld~~~~~~~~~~~~l~~dHPgf~D~~Yr~RR~~ia~~A~~~k~g~pip~v~YT~eE~~tW~~v~~rl~~l~ 80 (332)
T PF00351_consen 1 PWFPRKISDLDKCAHLVLKYGPELDADHPGFKDPEYRKRRKEIADIAFNYKHGDPIPRVEYTEEEHATWRTVYRRLMKLY 80 (332)
T ss_dssp E---SBGGGGGGTTTCEECSSTSCSTTSTTTTSHHHHHHHHHHHHHHHH--TTSTTSGGG--HHHHHHHHHHHHHHHHHH
T ss_pred CCCCCcHHHHHhhhccccccCCCccccchhhcccHHHHHHHHHHHHHHhccccCCCCcccCCHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999999998
Q ss_pred ---cchhHHhhhhHHHHhcCCCCCCCCChHHHHHhhhhccCceEEecCCCCChHHHHHhhhcCccceeeeccCCCCCCCC
Q psy14589 400 ---LMPEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYT 476 (655)
Q Consensus 400 ---Ac~ey~~g~~~l~~~~g~~~~~Ip~~~~~~~~l~~~tg~~~~~v~g~~~~~~f~~~la~r~f~~t~~ir~~~~~~y~ 476 (655)
||+||++|+++|++.|||++|+||||+|||++|+++|||+++||+||||+|+||++||+|+|||||||||+++|+||
T Consensus 81 ~~~AC~eyl~~~~~L~~~~G~~~d~IPqL~dvs~~L~~~TGw~l~pV~Gll~~rdF~~~LA~RvFp~TqyIRh~~~p~Yt 160 (332)
T PF00351_consen 81 PTHACREYLEGFPLLEKYCGYPEDRIPQLEDVSEFLKERTGWQLRPVAGLLSARDFFAGLAFRVFPCTQYIRHHSEPDYT 160 (332)
T ss_dssp HHHB-HHHHHHHHHHHHHHT-BTTB---HHHHHHHHHHHHS-EEEEESSEB-HHHHHHHHTTTEEEEESS---TTSTTS-
T ss_pred hhhhhHHHHHHHHHHHhccCCCccCCCCHHHHhHHHHhhcCeEEEEeCcccCHHHHHHHHhcCcCceEeeecCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCchhhhhhcCCCCccCChhHHHHHHHHhhhcCCCChHHHHHHHhhhhhhhhhhhccCCCCCCCCeEee-cccccCCHHH
Q psy14589 477 PEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTGFSLRP-VAGLLSSRDF 555 (655)
Q Consensus 477 ~epd~~He~~gh~p~l~~~~~a~~~~~~Gl~~l~~~~~~i~~l~~l~w~tve~gl~~~~~~~tg~~~~~-g~Gllss~~~ 555 (655)
||||||||++||+|||+||+||+|+|++|+++||+++++|.+|+||||||||||||+++ +++|+ |||||||.+|
T Consensus 161 pEPDi~HEl~GHvPmLadp~FA~f~q~~G~asl~asde~i~~LarlyWfTVEFGL~~e~-----g~lkaYGAGlLSS~gE 235 (332)
T PF00351_consen 161 PEPDIFHELFGHVPMLADPSFADFSQEIGLASLGASDEDIEKLARLYWFTVEFGLCREN-----GELKAYGAGLLSSYGE 235 (332)
T ss_dssp SS--HHHHHHHTHHHHTSHHHHHHHHHHHHHHTT--HHHHHHHHHHHHTTTTT-EEEET-----TEEEE--HHHHT-HHH
T ss_pred CCCccHhHHhccchhhhcHHHHHHHHHHHHHHhhhhHHHHHHHHhheeeeeEEEEEecC-----CceEEecccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999 99999 9999999999
Q ss_pred HHhhhc-----ccccc-----cccccCCCCCCCCCCcchhhhhcCCcccccCchHHHHHHHHhhcccCCceEEEeecccc
Q psy14589 556 LAGLAF-----RVFHS-----TQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPYLFYYVCHEL 625 (655)
Q Consensus 556 ~~~l~~-----~~f~~-----~~~ir~~~~~~y~~~pd~~hd~~ghvp~l~~p~f~~~~~~~g~~~~~a~~~~~~~~~~~ 625 (655)
++|..+ +.|-. +.|..+..|+.|.. -|.|.|+.-.+ .+|. ..++.||.++| |++
T Consensus 236 l~~als~~~~~~pfdp~~~~~~~y~i~~~Qp~YFv-~eSfe~~~~kl------------r~fa-~~i~rpf~~~y--dp~ 299 (332)
T PF00351_consen 236 LEHALSDKPEIRPFDPERVARTPYDITTYQPVYFV-IESFEDAKEKL------------REFA-ATIKRPFSVRY--DPY 299 (332)
T ss_dssp HHHHTSSSSEEEE--HHHHCTS---SSSS-SEEEE-ESSHHHHHHHH------------HHHH-HTS--SSEEEE--ETT
T ss_pred cccccCCCCeeeccCHHHHhCCCCCCCcccceEEE-ECCHHHHHHHH------------HHHH-HhCCCCCcccc--CCC
Confidence 999964 34533 34555555666665 35555553322 2232 35689999999 999
Q ss_pred cCccccccCch
Q psy14589 626 LGHVPLFADPS 636 (655)
Q Consensus 626 ~~~~~~~~~~~ 636 (655)
|++|-|+|++.
T Consensus 300 t~svevl~~~~ 310 (332)
T PF00351_consen 300 TQSVEVLDSPQ 310 (332)
T ss_dssp TTEEEEE-SHH
T ss_pred cceEEecCCHH
Confidence 99999999985
No 6
>cd03347 eu_PheOH Eukaryotic phenylalanine-4-hydroxylase (eu_PheOH); a member of the biopterin-dependent aromatic amino acid hydroxylase family of non-heme, iron(II)-dependent enzymes that also includes prokaryotic phenylalanine-4-hydroxylase (pro_PheOH), eukaryotic tyrosine hydroxylase (TyrOH) and eukaryotic tryptophan hydroxylase (TrpOH). PheOH catalyzes the first and rate-limiting step in the metabolism of the amino acid L-phenylalanine (L-Phe), the hydroxylation of L-Phe to L-tyrosine (L-Tyr). It uses (6R)-L-erythro-5,6,7,8-tetrahydrobiopterin (BH4) as the physiological electron donor. The catalytic activity of the tetrameric enzyme is tightly regulated by the binding of L-Phe and BH4 as well as by phosphorylation. Mutations in the human enzyme are linked to a severe variant of phenylketonuria.
Probab=100.00 E-value=1.8e-84 Score=665.65 Aligned_cols=270 Identities=61% Similarity=0.960 Sum_probs=246.7
Q ss_pred cCcccccchhhhhhhhhhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCC-------------------------
Q psy14589 345 PWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHSIL------------------------- 399 (655)
Q Consensus 345 pWfPr~~~dLD~~~~~~l~~~~~l~~dhpgf~D~~y~~rR~~ia~ia~~~k~g~~------------------------- 399 (655)
|||||+|+|||+|+|++|++|++|++|||||+|++||+||++||++|.+||+|++
T Consensus 1 pwfp~~~~dld~~~~~~~~~~~~l~~dhpgf~d~~yr~rr~~~a~~a~~y~~g~~ip~v~YT~eE~~~W~~l~~r~~~l~ 80 (306)
T cd03347 1 PWFPRTIQDLDRFANQILSYGAELDADHPGFKDPVYRARRKEFADIAYNYKHGQPIPRVEYTEEEKKTWGTVFRELKSLY 80 (306)
T ss_pred CCCCCcHHHHHHHhhHhhhcCCccccCCCCCCcHHHHHHHHHHHHHHHhccCCCCCCcCcCCHHHHHHHHHHHHHHHHHh
Confidence 8999999999999999999999999999999999999999999999999999987
Q ss_pred ---cchhHHhhhhHHHHhcCCCCCCCCChHHHHHhhhhccCceEEecCCCCChHHHHHhhhcCccceeeeccCCCCCCCC
Q psy14589 400 ---LMPEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYT 476 (655)
Q Consensus 400 ---Ac~ey~~g~~~l~~~~g~~~~~Ip~~~~~~~~l~~~tg~~~~~v~g~~~~~~f~~~la~r~f~~t~~ir~~~~~~y~ 476 (655)
||++|++|+++|+++||+++|+||||+|||++|+++|||+++||+||||+|+||++||+|+|||||||||+++|+||
T Consensus 81 ~~~Ac~eyl~~l~~L~~~~gl~~d~IPql~dvn~~L~~~TGw~~~pV~Gli~~~~Ff~~LA~R~Fp~t~yIR~~~~~~Yt 160 (306)
T cd03347 81 PTHACYEYNHVFPLLEKNCGFSEDNIPQLEDVSNFLQTCTGFRLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPMYT 160 (306)
T ss_pred ccccCHHHHHHHHHHHHhcCCCcCCCCCHHHHHHHHHhccCCEEEecCccCCHHHHHHHHhcCccceeeeecCccccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCchhhhhhcCCCCccCChhHHHHHHHHhhhcCCCChHHHHHHHhhhhhhhhhhhccCCCCCCCCeEee-cccccCCHHH
Q psy14589 477 PEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTGFSLRP-VAGLLSSRDF 555 (655)
Q Consensus 477 ~epd~~He~~gh~p~l~~~~~a~~~~~~Gl~~l~~~~~~i~~l~~l~w~tve~gl~~~~~~~tg~~~~~-g~Gllss~~~ 555 (655)
||||||||++||+|||+||+||+|+|++|++++|+++++|.+|+||||||||||||+++ +++|+ |||||||.+|
T Consensus 161 pEPDifHEl~GHvPlLadp~FA~f~q~~G~~~l~a~~~~i~~LarlYWfTVEFGLi~e~-----g~lkaYGAGlLSS~GE 235 (306)
T cd03347 161 PEPDICHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYIEKLATVYWFTVEFGLCKQG-----GSIKAYGAGLLSSFGE 235 (306)
T ss_pred CCCchHHHHhccchhhcCHHHHHHHHHHHHHhcCCCHHHHHHHhhheeeeeccccccCC-----CceeEeecchhcCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999 99999 9999999999
Q ss_pred HHhhhc-----ccccccccccCCCCCCCCCCcchhhhhcCCcccccCchHHHHHHHHh--hcccCCceEEEeecccccCc
Q psy14589 556 LAGLAF-----RVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIG--LASLGAPYLFYYVCHELLGH 628 (655)
Q Consensus 556 ~~~l~~-----~~f~~~~~ir~~~~~~y~~~pd~~hd~~ghvp~l~~p~f~~~~~~~g--~~~~~a~~~~~~~~~~~~~~ 628 (655)
++|+.+ +.|-+..-+|+++.++-.+ + -++.-++|.+..+.++ ...++.||.++| |++|++
T Consensus 236 ~~~als~~p~~~pfd~~~~~~t~Y~I~~~Q------p-----~YFv~~Sfe~l~~~l~~f~~~~~rpf~~~y--~~~t~~ 302 (306)
T cd03347 236 LQYCLSDKPELLPFEPEKTAVTKYPITEFQ------P-----LYYVAESFEDAKEKLRNFAATIPRPFSVRY--NPYTQR 302 (306)
T ss_pred HHHHcCCCCccCCCCHHHHhCCCCCCCCcC------C-----ceEEeCCHHHHHHHHHHHHHhCCCCcccee--cCccce
Confidence 999843 4454444555555543333 1 2455566666666665 355799999999 999999
Q ss_pred cccc
Q psy14589 629 VPLF 632 (655)
Q Consensus 629 ~~~~ 632 (655)
|-|+
T Consensus 303 v~~~ 306 (306)
T cd03347 303 IEVL 306 (306)
T ss_pred EeeC
Confidence 9874
No 7
>cd03345 eu_TyrOH Eukaryotic tyrosine hydroxylase (TyrOH); a member of the biopterin-dependent aromatic amino acid hydroxylase family of non-heme, iron(II)-dependent enzymes that also includes prokaryotic and eukaryotic phenylalanine-4-hydroxylase (PheOH) and eukaryotic tryptophan hydroxylase (TrpOH). TyrOH catalyzes the conversion of tyrosine to L-dihydroxyphenylalanine (L-DOPA), the rate-limiting step in the biosynthesis of the catecholamines dopamine, noradrenaline, and adrenaline.
Probab=100.00 E-value=1.1e-82 Score=650.36 Aligned_cols=262 Identities=50% Similarity=0.820 Sum_probs=237.0
Q ss_pred CcccccchhhhhhhhhhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCC--------------------------
Q psy14589 346 WFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHSIL-------------------------- 399 (655)
Q Consensus 346 WfPr~~~dLD~~~~~~l~~~~~l~~dhpgf~D~~y~~rR~~ia~ia~~~k~g~~-------------------------- 399 (655)
||||+|+|||+|+|++|+||++|++|||||+|++||+||++||++|.+||+|++
T Consensus 1 wfp~~~~dld~~~~~~~~~~~~l~~dhpgf~d~~yr~rr~~~a~~a~~y~~g~~ip~v~YT~eE~~~W~~l~~r~~~l~~ 80 (298)
T cd03345 1 WFPRHISELDKCHHLVTKYEPDLDLDHPGFSDKVYRERRKLIAEIAFQYKHGDPIPRVEYTAEEIATWKEVYKTLKDLHA 80 (298)
T ss_pred CCCCCHHHHHHHhhhhhhcCCcccCCCCCCCCHHHHHHHHHHHHHHhcCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999987
Q ss_pred --cchhHHhhhhHHHHhcCCCCCCCCChHHHHHhhhhccCceEEecCCCCChHHHHHhhhcCccceeeeccCCCCCCCCC
Q psy14589 400 --LMPEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTP 477 (655)
Q Consensus 400 --Ac~ey~~g~~~l~~~~g~~~~~Ip~~~~~~~~l~~~tg~~~~~v~g~~~~~~f~~~la~r~f~~t~~ir~~~~~~y~~ 477 (655)
||++|++|+++|+++||+++|+||||+|||++|+++|||+++||+||||+|+||++||+|+|||||||||+++|+|||
T Consensus 81 ~~Ac~eyl~gl~~L~~~~gl~~d~IPql~dvn~~L~~~TGw~~~pV~Gli~~~~Ff~~LA~R~Fp~t~yIR~~~~~~Ytp 160 (298)
T cd03345 81 THACKEYLDAFQLLEKECGYSEDRIPQLEDVSEFLKERTGFQLRPVAGLLSARDFLASLAFRVFQCTQYIRHASSPMHSP 160 (298)
T ss_pred hhhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHhccCCEEEecCccCCHHHHHHHHhcCcccccceecCCcccCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CchhhhhhcCCCCccCChhHHHHHHHHhhhcCCCChHHHHHHHhhhhhhhhhhhccCCCCCCCCeEee-cccccCCHHHH
Q psy14589 478 EPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTGFSLRP-VAGLLSSRDFL 556 (655)
Q Consensus 478 epd~~He~~gh~p~l~~~~~a~~~~~~Gl~~l~~~~~~i~~l~~l~w~tve~gl~~~~~~~tg~~~~~-g~Gllss~~~~ 556 (655)
|||||||++||+|||+||+||+|+|++|++++|+++++|.+|+||||||||||||+++ +++|+ |||||||.+|+
T Consensus 161 EPDi~HEl~GHvPlLadp~FA~f~q~~G~~~l~a~~~~i~~LarlYWfTVEFGLi~e~-----g~lkaYGAGlLSS~gEl 235 (298)
T cd03345 161 EPDCCHELLGHVPMLADPTFAQFSQDIGLASLGASDEEIEKLSTLYWFTVEFGLCKEN-----GELKAYGAGLLSSYGEL 235 (298)
T ss_pred CCchHHHHhccchhhCCHHHHHHHHHHHHHhcCCCHHHHHHHhHhhhhhhhcccccCC-----CceeEeechhhcCHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999 99999 99999999999
Q ss_pred Hhhhc-----ccccccccccCCCCCCCCCCcchhhhhcCCcccccCchHHHHHHHHh--hcccCCceEEEeecccc
Q psy14589 557 AGLAF-----RVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIG--LASLGAPYLFYYVCHEL 625 (655)
Q Consensus 557 ~~l~~-----~~f~~~~~ir~~~~~~y~~~pd~~hd~~ghvp~l~~p~f~~~~~~~g--~~~~~a~~~~~~~~~~~ 625 (655)
+|..+ +.|-+..-+|+++.++-.+ + -++.-++|.+..+.++ ...++.||.++| |++
T Consensus 236 ~~als~~p~~~pfd~~~~~~t~Y~i~~~Q------p-----~YFv~~Sfe~l~~~l~~f~~~~~rpf~~~y--~~~ 298 (298)
T cd03345 236 LHALSDEPEHRPFDPAATAVQPYQDQTYQ------P-----IYFVSESFSDAKDKLRNYASTMKRPFSVRY--DPY 298 (298)
T ss_pred HHHCCCCCccCCCCHHHHhcCCCCCCCcC------C-----ceEEeCCHHHHHHHHHHHHHhcCCCCcccC--CCC
Confidence 99854 3444444445444433222 1 2444556666666655 345689999999 764
No 8
>cd03346 eu_TrpOH Eukaryotic tryptophan hydroxylase (TrpOH); a member of the biopterin-dependent aromatic amino acid hydroxylase family of non-heme, iron(II)-dependent enzymes that also includes prokaryotic and eukaryotic phenylalanine-4-hydroxylase (PheOH) and eukaryotic tyrosine hydroxylase (TyrOH). TrpOH oxidizes L-tryptophan to 5-hydroxy-L-tryptophan, the rate-limiting step in the biosynthesis of serotonin (5-hydroxytryptamine), a widely distributed hormone and neurotransmitter.
Probab=100.00 E-value=1.3e-80 Score=633.16 Aligned_cols=227 Identities=61% Similarity=0.989 Sum_probs=216.2
Q ss_pred cCcccccchhhhhhhhhhhcCCCCCCCCCCCCCHHHHHHHHHHHHHHhccCCCCC-------------------------
Q psy14589 345 PWFPRRIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHSIL------------------------- 399 (655)
Q Consensus 345 pWfPr~~~dLD~~~~~~l~~~~~l~~dhpgf~D~~y~~rR~~ia~ia~~~k~g~~------------------------- 399 (655)
|||||+|+|||+|+|++|+||++|++|||||+|++||+||++||++|.+||+|++
T Consensus 1 ~wfp~~~~~ld~~~~~~~~~~~~l~~dhpg~~d~~yr~rr~~~a~~a~~y~~g~~ip~i~YT~~E~~~W~~l~~r~~~l~ 80 (287)
T cd03346 1 PWFPKKISDLDKCANRVLMYGSELDADHPGFKDNVYRKRRKYFADVAMNYKHGDPIPRVEYTEEEIKTWGTVYRELNRLY 80 (287)
T ss_pred CCCCCcHHHHHHHhhhhhccCCccccCCCCCCChHHHHHHHHHHHHHhhccCCCCCCccccCHHHHHHHHHHHHHHHHHh
Confidence 8999999999999999999999999999999999999999999999999999987
Q ss_pred ---cchhHHhhhhHHHHhcCCCCCCCCChHHHHHhhhhccCceEEecCCCCChHHHHHhhhcCccceeeeccCCCCCCCC
Q psy14589 400 ---LMPEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYT 476 (655)
Q Consensus 400 ---Ac~ey~~g~~~l~~~~g~~~~~Ip~~~~~~~~l~~~tg~~~~~v~g~~~~~~f~~~la~r~f~~t~~ir~~~~~~y~ 476 (655)
||++|++|+++|+++||+++|+||||+|||++|+++|||+++||+||||+++||++||+|+|||||||||+++|+||
T Consensus 81 ~~~Ac~eyl~gl~~L~~~~gl~~d~IPql~dvn~~L~~~TGw~~~pV~Gli~~~~Ff~~LA~r~Fp~t~~IR~~~~~~Yt 160 (287)
T cd03346 81 PTHACREYLKNLPLLEKHCGYREDNIPQLEDVSRFLKERTGFTIRPVAGYLSPRDFLAGLAFRVFHCTQYVRHSSDPFYT 160 (287)
T ss_pred hccccHHHHHHHHHHHhccCCCcCCCCCHHHHHHHHHhccCCEEEecCCcCCHHHHHHHHhcCcccceeeecCccccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCchhhhhhcCCCCccCChhHHHHHHHHhhhcCCCChHHHHHHHhhhhhhhhhhhccCCCCCCCCeEee-cccccCCHHH
Q psy14589 477 PEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTGFSLRP-VAGLLSSRDF 555 (655)
Q Consensus 477 ~epd~~He~~gh~p~l~~~~~a~~~~~~Gl~~l~~~~~~i~~l~~l~w~tve~gl~~~~~~~tg~~~~~-g~Gllss~~~ 555 (655)
||||||||++||+|||+||+||+|+|++|++++|+++++|.+|+||||||||||||+++ +++|+ |||||||.+|
T Consensus 161 pEPDifHEl~GHvPlLadp~FA~f~q~~G~~~l~a~~~~i~~LarlYWfTVEFGLi~e~-----~~lkaYGAGiLSS~gE 235 (287)
T cd03346 161 PEPDTCHELLGHVPLLADPSFAQFSQEIGLASLGASDEDIQKLATCYFFTVEFGLCKQD-----GQLKVYGAGLLSSIGE 235 (287)
T ss_pred CCCchHHHHhccchhhcCHHHHHHHHHHHHHhcCCCHHHHHHHhHhhhhhcccccccCC-----CceeEeccchhcCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999 99999 9999999999
Q ss_pred HHhhh-----cccccccccccCCCCC
Q psy14589 556 LAGLA-----FRVFHSTQYIRHPSKP 576 (655)
Q Consensus 556 ~~~l~-----~~~f~~~~~ir~~~~~ 576 (655)
++|.. .+.|-+..-+|+++.+
T Consensus 236 ~~~als~~~~~~pfd~~~~~~t~Y~i 261 (287)
T cd03346 236 LKHALSGEAKVKPFDPKVTCKQECLI 261 (287)
T ss_pred HHHHccCCCccCCCCHHHHhCCCCCC
Confidence 99985 2455444444544443
No 9
>PRK11913 phhA phenylalanine 4-monooxygenase; Reviewed
Probab=100.00 E-value=2.9e-62 Score=499.20 Aligned_cols=202 Identities=35% Similarity=0.469 Sum_probs=184.0
Q ss_pred CHHHHHHHHHHHHHHhccCCCCC--------------------------cchhHHhhhhHHHHhcCCCCCCCCChHHHHH
Q psy14589 377 DPVYRARRKYFADLAFNYKHSIL--------------------------LMPEHNHVFPLLIQNCGYAEDNIPQLEDISK 430 (655)
Q Consensus 377 D~~y~~rR~~ia~ia~~~k~g~~--------------------------Ac~ey~~g~~~l~~~~g~~~~~Ip~~~~~~~ 430 (655)
+++||+||+.+++++.+|+.+++ ||++|++|+++| |++.|+||||+|||+
T Consensus 1 ~~~~~~~r~~~~~~a~~y~~~q~~~~YT~~e~~~W~~l~~r~~~~~~~~Ac~~yl~gl~~L----~l~~d~IPql~~in~ 76 (275)
T PRK11913 1 DAAYRARRDAGMEKAADYTADQPWIDYTAEEHAIWQTLYERQLALLPGRACDEFLEGLEAL----GLPKDRIPQLDEINR 76 (275)
T ss_pred ChhHhhhhhhHHHHHHhccCCCCcccCCHHHHHHHHHHHHHHHHHhccccCHHHHHHHHHc----CCCCCCCCCHHHHHH
Confidence 56999999999999999999987 999999999999 999999999999999
Q ss_pred hhhhccCceEEecCCCCChHHHHHhhhcCccceeeeccCCCCCCCCCCchhhhhhcCCCCccCChhHHHHHHHHhhhcCC
Q psy14589 431 FLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLG 510 (655)
Q Consensus 431 ~l~~~tg~~~~~v~g~~~~~~f~~~la~r~f~~t~~ir~~~~~~y~~epd~~He~~gh~p~l~~~~~a~~~~~~Gl~~l~ 510 (655)
+|+++|||+++||+||||+++||++||+|+|||||||||+++|+||||||||||++||+|||+||+||+|+|++|+++++
T Consensus 77 ~L~~~TGw~~~pV~Glip~~~Ff~~LA~r~Fp~t~~IR~~~~~~YtpEPDifHevfGHvPmL~~p~FAdf~q~~G~~~l~ 156 (275)
T PRK11913 77 VLQAATGWQVVPVPGLIPFDVFFELLANRRFPVATFIRRPEELDYLQEPDIFHDVFGHVPLLTNPVFADFMQAYGKLGLR 156 (275)
T ss_pred HHHhhcCCEEEecCccCCHHHHHHHHhcCccceeeeecCccccCCCCCCchHHHHhccchhhcCHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHH-HHHhhhhhhhhhhhccCCCCCCCCeEee-cccccCCHHHHHhhh-c-----ccccccccccCCC-----CCC
Q psy14589 511 APDEYVE-RLATSNNFMIVPRLASLSPDSTGFSLRP-VAGLLSSRDFLAGLA-F-----RVFHSTQYIRHPS-----KPL 577 (655)
Q Consensus 511 ~~~~~i~-~l~~l~w~tve~gl~~~~~~~tg~~~~~-g~Gllss~~~~~~l~-~-----~~f~~~~~ir~~~-----~~~ 577 (655)
++++++. +|+||||||||||||+++ +++|+ |||||||.+|++|.. + +.|-+..-+|+++ |+.
T Consensus 157 a~~~~~~~~LarlyWfTVEFGLi~e~-----~~lk~YGAGiLSS~gE~~~al~s~~p~~~pfd~~~v~~t~Y~i~~~Qp~ 231 (275)
T PRK11913 157 ASKEGRLEFLARLYWFTVEFGLIRTP-----GGLRIYGAGILSSPGETLYALESDSPNRRPFDLERVMRTPYRIDIFQPT 231 (275)
T ss_pred cChhhHHHHHhhheeeeecccccccC-----CceeEeechhhcCHHHHHHHhcCCCCeeecCCHHHHhCCCCCCCCcCCc
Confidence 9988877 999999999999999999 99999 999999999999997 2 3454444455554 444
Q ss_pred CCCCcchhhhh
Q psy14589 578 YTPEPDVCHEL 588 (655)
Q Consensus 578 y~~~pd~~hd~ 588 (655)
|.. -|.|.++
T Consensus 232 YFv-i~sf~~L 241 (275)
T PRK11913 232 YFV-IDSFEQL 241 (275)
T ss_pred eEE-eCCHHHH
Confidence 554 2444444
No 10
>cd03348 pro_PheOH Prokaryotic phenylalanine-4-hydroxylase (pro_PheOH); a member of the biopterin-dependent aromatic amino acid hydroxylase family of non-heme, iron(II)-dependent enzymes that also includes the eukaryotic proteins, phenylalanine-4-hydroxylase (eu_PheOH), tyrosine hydroxylase (TyrOH) and tryptophan hydroxylase (TrpOH). PheOH catalyzes the hydroxylation of L-Phe to L-tyrosine (L-Tyr). It uses (6R)-L-erythro-5,6,7,8-tetrahydrobiopterin (BH4) as the physiological electron donor.
Probab=100.00 E-value=3.2e-59 Score=465.19 Aligned_cols=196 Identities=29% Similarity=0.379 Sum_probs=175.5
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhccCCCCCcchhHHhhhhHHHHhcCCCCCCCCChHHHHHhhhhccCceEEecCCCCChH
Q psy14589 371 DHPGFTDPVYRARRKYFADLAFNYKHSILLMPEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSR 450 (655)
Q Consensus 371 dhpgf~D~~y~~rR~~ia~ia~~~k~g~~Ac~ey~~g~~~l~~~~g~~~~~Ip~~~~~~~~l~~~tg~~~~~v~g~~~~~ 450 (655)
....+|++|-.-=|....++...+ .+.||++|++|+++| |++.|+||||+|||++|+++|||+++||+||||++
T Consensus 7 ~~~~YT~~e~~~W~~l~~r~~~~~--~~~Ac~~yl~gl~~L----~l~~d~IPql~~vn~~L~~~TGw~~~pV~Glip~~ 80 (228)
T cd03348 7 GQIDYTPEEHAVWRTLYERQAKLL--PGRACDAFLEGLEKL----GLPTDRIPDFADVSERLKAATGWTVVAVPGLIPDD 80 (228)
T ss_pred CcccCCHHHHHHHHHHHHHHHHHh--hcccCHHHHHHHHHc----CCCCCCCCCHHHHHHHHHhccCCEEEecCCcCCHH
Confidence 344677777776666777766665 346999999999999 89999999999999999999999999999999999
Q ss_pred HHHHhhhcCccceeeeccCCCCCCCCCCchhhhhhcCCCCccCChhHHHHHHHHhhhcCCCCh-HHHHHHHhhhhhhhhh
Q psy14589 451 DFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPD-EYVERLATSNNFMIVP 529 (655)
Q Consensus 451 ~f~~~la~r~f~~t~~ir~~~~~~y~~epd~~He~~gh~p~l~~~~~a~~~~~~Gl~~l~~~~-~~i~~l~~l~w~tve~ 529 (655)
+||++||+|+|||||||||+++|+||||||||||++||+|||+||+||+|+|++|++++++++ +++.+|+|||||||||
T Consensus 81 ~Ff~~LA~r~Fp~t~~iR~~~~~~YtpEPDifHe~fGHvPmL~~p~fAdf~q~~G~~~l~a~~~~~~~~LarlyWfTVEF 160 (228)
T cd03348 81 EFFEHLANRRFPVTNFIRRPEELDYLQEPDIFHDIFGHVPMLTNPVFADFMQAYGKGGLKATGLEDRALLARLYWYTVEF 160 (228)
T ss_pred HHHHHHhcCCCceeeeecCccccCCCCCcHHHHHHhcccHhhcCHHHHHHHHHHHHHHhCCCCHHHHHHHhHhhhhhccc
Confidence 999999999999999999999999999999999999999999999999999999999999999 9999999999999999
Q ss_pred hhccCCCCCCCCeEee-cccccCCHHHHHhhhcc------cccccccccCCCCCC
Q psy14589 530 RLASLSPDSTGFSLRP-VAGLLSSRDFLAGLAFR------VFHSTQYIRHPSKPL 577 (655)
Q Consensus 530 gl~~~~~~~tg~~~~~-g~Gllss~~~~~~l~~~------~f~~~~~ir~~~~~~ 577 (655)
|||+++ +++|+ |||||||.+|++|..+. .|-+..-+|+++.++
T Consensus 161 GLi~e~-----~~lk~YGAGiLSS~gE~~~al~~~~~~~~~fd~~~v~~t~Y~i~ 210 (228)
T cd03348 161 GLIQEP-----GGLRIYGAGILSSPGETLYALESPDPNRIPFDLERVMRTPYRID 210 (228)
T ss_pred cccccC-----CceeEeccchhcCHHHHHHHcCCCCCcccCCCHHHHhCCCCCCC
Confidence 999999 99999 99999999999998542 444444455555433
No 11
>cd00361 arom_aa_hydroxylase Biopterin-dependent aromatic amino acid hydroxylase; a family of non-heme, iron(II)-dependent enzymes that includes prokaryotic and eukaryotic phenylalanine-4-hydroxylase (PheOH), eukaryotic tyrosine hydroxylase (TyrOH) and eukaryotic tryptophan hydroxylase (TrpOH). PheOH converts L-phenylalanine to L-tyrosine, an important step in phenylalanine catabolism and neurotransmitter biosynthesis, and is linked to a severe variant of phenylketonuria in humans. TyrOH and TrpOH are involved in the biosynthesis of catecholamine and serotonin, respectively. The eukaryotic enzymes are all homotetramers.
Probab=100.00 E-value=4e-59 Score=463.16 Aligned_cols=195 Identities=49% Similarity=0.661 Sum_probs=173.0
Q ss_pred CCCCHHHHHHHHHHHHHHhccCCCCCcchhHHhhhhHHHHhcCCCCCCCCChHHHHHhhhhccCceEEecCCCCChHHHH
Q psy14589 374 GFTDPVYRARRKYFADLAFNYKHSILLMPEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFL 453 (655)
Q Consensus 374 gf~D~~y~~rR~~ia~ia~~~k~g~~Ac~ey~~g~~~l~~~~g~~~~~Ip~~~~~~~~l~~~tg~~~~~v~g~~~~~~f~ 453 (655)
.++++|-.-=|....++...+ .+.||++|++|+++| ++++|+||||+|||++|+++|||+++||+||||+++||
T Consensus 4 ~YT~~e~~~W~~l~~r~~~~~--~~~Ac~~yl~gl~~l----~l~~d~IPql~~in~~L~~~TGw~~~pV~gli~~~~Ff 77 (221)
T cd00361 4 DYTEEEHATWRTLYRRLKKLL--PTHACREYLEGLELL----GLPEDRIPQLEDVSEFLKALTGWTLVPVAGLISPRDFF 77 (221)
T ss_pred cCCHHHHHHHHHHHHHHHHHh--ccccCHHHHHHHHHc----CCCCCCCCCHHHHHHHHHhhcCCEEEecCCcCCHHHHH
Confidence 355555555555666665554 456999999999999 89999999999999999999999999999999999999
Q ss_pred HhhhcCccceeeeccCCCCCCCCCCchhhhhhcCCCCccCChhHHHHHHHHhhhcCCCCh-HHHHHHHhhhhhhhhhhhc
Q psy14589 454 AGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPD-EYVERLATSNNFMIVPRLA 532 (655)
Q Consensus 454 ~~la~r~f~~t~~ir~~~~~~y~~epd~~He~~gh~p~l~~~~~a~~~~~~Gl~~l~~~~-~~i~~l~~l~w~tve~gl~ 532 (655)
++||+|+|||||||||+++|+||||||||||++||+|||+||+||+|+|++|++++++++ +++.+|+||||||||||||
T Consensus 78 ~~LA~r~Fp~t~~iR~~~~~~YtpEPDifHe~~GH~P~L~~p~fAdf~q~~G~~~l~a~~~~~~~~LarlyWfTVEFGLi 157 (221)
T cd00361 78 ALLAFRVFPVTQYIRHPEEPDYTPEPDIFHELFGHVPLLADPSFADFSQEYGLASLGASDLEEIEKLARLYWFTVEFGLI 157 (221)
T ss_pred HHHhcCCCceeeeecCcCCCCCCCCChhHHHHhccchhhcCHHHHHHHHHHHHHHhCcCCHHHHHHHHHhhhhhcccccc
Confidence 999999999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred cCCCCCCCCeEee-cccccCCHHHHHhhhc-----ccccccccccCCCCCCCC
Q psy14589 533 SLSPDSTGFSLRP-VAGLLSSRDFLAGLAF-----RVFHSTQYIRHPSKPLYT 579 (655)
Q Consensus 533 ~~~~~~tg~~~~~-g~Gllss~~~~~~l~~-----~~f~~~~~ir~~~~~~y~ 579 (655)
+++ +++|+ |||||||.+|++|..+ +.|-+..-+|+++.++-.
T Consensus 158 ~e~-----~~lk~YGAGiLSS~gE~~~~l~~~~~~~~fd~~~v~~t~Y~i~~~ 205 (221)
T cd00361 158 KED-----GELKAYGAGLLSSYGELQHALSDKPKRIPFDPERVARTPYDITSF 205 (221)
T ss_pred cCC-----CceeEeechhhcCHHHHHHHccCCCccCCCCHHHHhCCCCCCCCc
Confidence 999 99999 9999999999999863 245554555655554433
No 12
>TIGR01267 Phe4hydrox_mono phenylalanine-4-hydroxylase, monomeric form. This family is of biopterin and metal-dependent hydroxylases is related to a family of longer, multimeric aromatic amino acid hydroxylases that have additional N-terminal regulatory sequences. These include tyrosine 3-monooxygenase, phenylalanine-4-hydroxylase, and tryptophan 5-monoxygenase.
Probab=100.00 E-value=1.4e-58 Score=464.59 Aligned_cols=196 Identities=27% Similarity=0.359 Sum_probs=175.0
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhccCCCCCcchhHHhhhhHHHHhcCCCCCCCCChHHHHHhhhhccCceEEecCCCCChH
Q psy14589 371 DHPGFTDPVYRARRKYFADLAFNYKHSILLMPEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSR 450 (655)
Q Consensus 371 dhpgf~D~~y~~rR~~ia~ia~~~k~g~~Ac~ey~~g~~~l~~~~g~~~~~Ip~~~~~~~~l~~~tg~~~~~v~g~~~~~ 450 (655)
....+|++|-.-=|....++...+ .+.||++|++|+++| |++.|+||||+|||++|+++|||+++||+||||++
T Consensus 7 ~~~~YT~~e~~~W~~l~~r~~~~~--~~~Ac~~yl~gl~~l----gl~~d~IPql~~vn~~L~~~TGw~~~pV~Gli~~~ 80 (248)
T TIGR01267 7 GFDHYSEEEHAVWNTLITRQLKLI--EGRACQEYLDGIEQL----GLPHDRIPDFDEINRKLQATTGWRIAAVPGLIPFQ 80 (248)
T ss_pred CcccCCHHHHHHHHHHHHHHHHHh--hccccHHHHHHHHHc----CCCCCCCCCHHHHHHHHHhccCCEEEecCCcCCHH
Confidence 445677877776667777766664 456999999999999 99999999999999999999999999999999999
Q ss_pred HHHHhhhcCccceeeeccCCCCCCCCCCchhhhhhcCCCCccCChhHHHHHHHHhhhcCCCChH-HHHHHHhhhhhhhhh
Q psy14589 451 DFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDE-YVERLATSNNFMIVP 529 (655)
Q Consensus 451 ~f~~~la~r~f~~t~~ir~~~~~~y~~epd~~He~~gh~p~l~~~~~a~~~~~~Gl~~l~~~~~-~i~~l~~l~w~tve~ 529 (655)
+||++||+|+|||||||||+++|+||||||||||++||+|||+||+||+|+|++|+++++++++ ++.+|+|||||||||
T Consensus 81 ~Ff~~LA~r~Fp~t~~iR~~~~~~YtpEPDifHe~fGH~P~L~~P~FA~f~q~~G~~~l~a~~~~~~~~LarlyWfTVEF 160 (248)
T TIGR01267 81 TFFEHLANRRFPVTTWLRTPEELDYLQEPDIFHDIFGHVPLLTNPVFADFTHTYGKLGLKASALGRVEMLARLYWYTIEF 160 (248)
T ss_pred HHHHHHhcCccceeeeecCccccCCCCCchHHHHHhccccccCChHHHHHHHHHHHHHhCCCchHHHHHHhhhheeeeec
Confidence 9999999999999999999999999999999999999999999999999999999999999887 578999999999999
Q ss_pred hhccCCCCCCCCeEee-cccccCCHHHHHhhhc------ccccccccccCCCCCC
Q psy14589 530 RLASLSPDSTGFSLRP-VAGLLSSRDFLAGLAF------RVFHSTQYIRHPSKPL 577 (655)
Q Consensus 530 gl~~~~~~~tg~~~~~-g~Gllss~~~~~~l~~------~~f~~~~~ir~~~~~~ 577 (655)
|||+++ +++|+ |||||||.+|++|+.+ +.|-+..-+|+++.++
T Consensus 161 GLi~e~-----~~lr~YGAGiLSS~gE~~~al~s~~p~~~pfd~~~v~~t~Y~i~ 210 (248)
T TIGR01267 161 GLVETD-----QGKRIYGAGILSSPKETVYSLESDEPLHVAFDLLEAMRTPYRID 210 (248)
T ss_pred cccccC-----CceeEecchhhcCHHHHHHHhcCCCCcccCCCHHHHhCCCCCCC
Confidence 999999 99999 9999999999999873 2444444455555433
No 13
>PRK14055 aromatic amino acid hydroxylase; Provisional
Probab=100.00 E-value=8.5e-54 Score=439.33 Aligned_cols=199 Identities=23% Similarity=0.269 Sum_probs=165.3
Q ss_pred CCcchhHHhhhhHHHHhcCCCCCCCCChHHHHHhhhhccCceEEecCCCCChHHHHHhhhcCccceeeeccCCCCCCCCC
Q psy14589 398 ILLMPEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTP 477 (655)
Q Consensus 398 ~~Ac~ey~~g~~~l~~~~g~~~~~Ip~~~~~~~~l~~~tg~~~~~v~g~~~~~~f~~~la~r~f~~t~~ir~~~~~~y~~ 477 (655)
..||++|++|++.| |+..| +|+++|||++|++.|||+++||+||||+++||++||+|+|||||||||+++|+|||
T Consensus 120 ~~Ac~eYLeGl~~L----~L~~D-~~~L~eVn~~L~~~TGW~v~pVpGLIp~~~Ff~~LA~R~FPvttyIR~~ee~dYtp 194 (362)
T PRK14055 120 SYCPRFFLDYLEAF----GLLSD-FLDHQAVIKFFELETHFSYYPVSGFVAPHQYLSLLQDRYFPIASVMRTLDKDNFSL 194 (362)
T ss_pred hhccHHHHHHHHhc----CCCcc-cCChHHHHHHHHhccCCEEEecCCcCCHHHHHHHHhcCeeceeeeeccccccCCCC
Confidence 46999999999999 99988 88899999999999999999999999999999999999999999999999999999
Q ss_pred CchhhhhhcCCCCccCChhHHHHHHHHhhhcCCC---------ChHHHH-------HHHhhhhhhhhhhhccCCCCCCCC
Q psy14589 478 EPDVCHELLGHVPLFADPSFAQFSQEIGLASLGA---------PDEYVE-------RLATSNNFMIVPRLASLSPDSTGF 541 (655)
Q Consensus 478 epd~~He~~gh~p~l~~~~~a~~~~~~Gl~~l~~---------~~~~i~-------~l~~l~w~tve~gl~~~~~~~tg~ 541 (655)
|||||||++||+|||+||+||+|+|++|++++++ +++++. .|+|+||||||||||+++ +
T Consensus 195 EPDifHEvfGHvPmLanP~FAdF~q~~G~~glkA~e~~~sL~~~ee~ie~~~~~l~~LaRLYWFTVEFGLI~e~-----g 269 (362)
T PRK14055 195 TPDLIHDLLGHVPWLLHPSFSEFFINMGRLFTKVIEKVQALPSKKQRIQTLQSNLIAIVRCFWFTVESGLIENH-----E 269 (362)
T ss_pred CchHHHHhhccchhhcCHHHHHHHHHHHHHHHHHhhhhhcccchHHHHHhhhhHHHHhhheeeeeeeeeeeccC-----C
Confidence 9999999999999999999999999999985554 445553 599999999999999999 9
Q ss_pred eEee-cccccCCHHHHHhhhc-----ccccccccccCCCC-----CCCCCCcchhhhhcCCcccccCchHHHHHHHHhhc
Q psy14589 542 SLRP-VAGLLSSRDFLAGLAF-----RVFHSTQYIRHPSK-----PLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLA 610 (655)
Q Consensus 542 ~~~~-g~Gllss~~~~~~l~~-----~~f~~~~~ir~~~~-----~~y~~~pd~~hd~~ghvp~l~~p~f~~~~~~~g~~ 610 (655)
++|+ |||||||.+|++|..+ +.|-+..-+|+++. +.|.. -|.|.+++-=+. ....++.+..+.
T Consensus 270 ~lKiYGAGILSS~GEl~~aL~~~~~r~pFD~~~v~rTpY~Id~~Qp~YFV-ieSfe~L~e~~~-----~i~~~v~~~~~~ 343 (362)
T PRK14055 270 GRKAYGAVLISSPQELGHAFIDNVRVLPLELDQIIRLPFNTSTPQETLFS-IRHFDELVELTS-----KLEWMLDQGLLE 343 (362)
T ss_pred ceeEecceeccChHHHHHHhcCCCCcCCCCHHHHhcCCCCCCCCCCceEE-eCCHHHHHHHHH-----HHHHHHHHhhhc
Confidence 9999 9999999999999853 34555455555554 44544 255555543222 233344444455
Q ss_pred cc
Q psy14589 611 SL 612 (655)
Q Consensus 611 ~~ 612 (655)
|+
T Consensus 344 gl 345 (362)
T PRK14055 344 SI 345 (362)
T ss_pred CC
Confidence 55
No 14
>PRK14056 phenylalanine 4-monooxygenase; Provisional
Probab=100.00 E-value=1.1e-50 Score=440.19 Aligned_cols=197 Identities=21% Similarity=0.233 Sum_probs=167.8
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhccCCCCCcchhHHhhhhHHHHhcCCCCCCCCChHHHHHhhhhccCceEEecCCCCC
Q psy14589 369 DADHPGFTDPVYRARRKYFADLAFNYKHSILLMPEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLS 448 (655)
Q Consensus 369 ~~dhpgf~D~~y~~rR~~ia~ia~~~k~g~~Ac~ey~~g~~~l~~~~g~~~~~Ip~~~~~~~~l~~~tg~~~~~v~g~~~ 448 (655)
+++...||+.|-.-=|....+....+ .+.||++|++|++++ |++.|+||||++||++|++ |||+++||+||||
T Consensus 15 ~Q~y~~YT~~ehavWr~v~~r~~~~l--~~~Ac~~YL~GL~~l----gl~~d~IPql~emN~~L~~-tGW~~vpV~GlIp 87 (578)
T PRK14056 15 PQHYDQYTPVDHAVWRYVMRQNHSFL--KDVAHPAYLNGLQST----GINIERIPKVEEMNECLAE-IGWGAVAVDGFIP 87 (578)
T ss_pred CCChhhCCHHHHHHHHHHHHHHHHHh--ccccCHHHHHHHHHc----CCCccCCCCHHHHHHHHHH-cCCEEEeccccCC
Confidence 44566777777665555555554443 456999999999877 9999999999999999999 9999999999999
Q ss_pred hHHHHHhhhcCccceeeeccCCCCCCCCCCchhhhhhcCCCCccCChhHHHHHHHHhhhc--------------------
Q psy14589 449 SRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLAS-------------------- 508 (655)
Q Consensus 449 ~~~f~~~la~r~f~~t~~ir~~~~~~y~~epd~~He~~gh~p~l~~~~~a~~~~~~Gl~~-------------------- 508 (655)
+++||++||+|+|||||||||+++|+||||||||||++||+|||+||+||+|+|++|+.+
T Consensus 88 ~~~Ffe~LA~rvFpit~~IR~~e~i~YtPEPDIfHE~~GH~P~LadP~fAdf~q~~G~iG~kAi~~~~d~~~y~Air~ls 167 (578)
T PRK14056 88 PVAFFEFQGHGVLPIATDIRKVENIEYTPAPDIIHEAAGHAPILADPTYAEYLRRFGEIGAKAISSKEDHDVFEAVRTLS 167 (578)
T ss_pred HHHHHHHHhcCeeceeeeeccccccCCCCCCchhhhhhccchhhcCHHHHHHHHHHHHHHHhhccchhhhhhhhhhhhhh
Confidence 999999999999999999999999999999999999999999999999999999998864
Q ss_pred -----CCCChHHH--------------------HHHHhhhhhhhhhhhccCCCCCCCCeEee-cccccCCHHHHHhhhc-
Q psy14589 509 -----LGAPDEYV--------------------ERLATSNNFMIVPRLASLSPDSTGFSLRP-VAGLLSSRDFLAGLAF- 561 (655)
Q Consensus 509 -----l~~~~~~i--------------------~~l~~l~w~tve~gl~~~~~~~tg~~~~~-g~Gllss~~~~~~l~~- 561 (655)
+|+++++| .+++||||||||||||+++ +++|+ |||||||.+|++|+..
T Consensus 168 i~KEs~~as~e~i~~AE~~~~~~~~~~~~~Se~~~LaRLyWfTVEFGLI~e~-----~~lKiYGAGLLSS~GE~~~~lsd 242 (578)
T PRK14056 168 IVKESPTSTPEEVAAAENRVIEKQNLVSGLSEAEQISRLFWWTVEYGLIGTL-----DNPKIYGAGLLSSVGESKHCLTD 242 (578)
T ss_pred hcccccCCchHhhhhhhhhhhhhhccccchHHHHHHhheeeeeeeeeeeccC-----CceeEecceeecCHHHHHHhccC
Confidence 44456655 7899999999999999999 99999 9999999999999964
Q ss_pred ----ccccccccccCCCCCC
Q psy14589 562 ----RVFHSTQYIRHPSKPL 577 (655)
Q Consensus 562 ----~~f~~~~~ir~~~~~~ 577 (655)
+.|-+...+|+++.++
T Consensus 243 ~~~k~pfd~~~v~~t~Y~It 262 (578)
T PRK14056 243 AVEKVPFSIEACTSTTYDIT 262 (578)
T ss_pred CCccCCCCHHHHhCCCCCCC
Confidence 2343333445544433
No 15
>COG3186 Phenylalanine-4-hydroxylase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.3e-48 Score=383.30 Aligned_cols=190 Identities=27% Similarity=0.333 Sum_probs=169.6
Q ss_pred HHHHHHHHHHhccCCCC-CcchhHHhhhhHHHHhcCCCCCCCCChHHHHHhhhhccCceEEecCCCCChHHHHHhhhcCc
Q psy14589 382 ARRKYFADLAFNYKHSI-LLMPEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVAGLLSSRDFLAGLAFRV 460 (655)
Q Consensus 382 ~rR~~ia~ia~~~k~g~-~Ac~ey~~g~~~l~~~~g~~~~~Ip~~~~~~~~l~~~tg~~~~~v~g~~~~~~f~~~la~r~ 460 (655)
++.-|..-+.+..|-=. .||++|++|+++| |++.++|||+++||++|+++|||+++|||||||+..||++||+|+
T Consensus 46 eh~vW~tL~~rq~~l~~~rac~~fLdgle~l----gL~~~~ipd~~~in~~l~~~Tgw~v~~Vpglvp~~~ff~lLanrr 121 (291)
T COG3186 46 EHAVWRTLIDRQTKLLKGRACQEFLDGLEAL----GLPLSRIPDFDEINRVLQRETGWQVVAVPGLVPFDVFFDLLANRR 121 (291)
T ss_pred HHHHHHHHHHHHHHHHhccchHHHHHHHHHc----CCCcccCCCHHHHHHHHHHhcCcEEEecCccCChHHHHHHHhhcc
Confidence 44455555555444333 4999999999999 999999999999999999999999999999999999999999999
Q ss_pred cceeeeccCCCCCCCCCCchhhhhhcCCCCccCChhHHHHHHHHhhhcCCCChH-HHHHHHhhhhhhhhhhhccCCCCCC
Q psy14589 461 FHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDE-YVERLATSNNFMIVPRLASLSPDST 539 (655)
Q Consensus 461 f~~t~~ir~~~~~~y~~epd~~He~~gh~p~l~~~~~a~~~~~~Gl~~l~~~~~-~i~~l~~l~w~tve~gl~~~~~~~t 539 (655)
||+++|||++++.||+.|||+|||++||||||+||.||+|+|.+|..++++.+. +...++|+||||||||||++.
T Consensus 122 FPva~~mRt~~eldylqePD~fHdvfGHvP~Lt~P~FAdf~~~yG~lg~ka~~~~~~~~laRlyW~TvEfGLv~~~---- 197 (291)
T COG3186 122 FPVATFMRTPDELDYLQEPDIFHDVFGHVPMLTHPVFADFMQAYGKLGLKAIELGRLLMLARLYWYTVEFGLVETP---- 197 (291)
T ss_pred CcHHHHhcCHhhcccccCccHHHHHhccCchhcCchHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhhhhceeecc----
Confidence 999999999999999999999999999999999999999999999999998664 455999999999999999999
Q ss_pred CCeEee-cccccCCHHHHHhhhc------ccccccccccCCCCCCCCC
Q psy14589 540 GFSLRP-VAGLLSSRDFLAGLAF------RVFHSTQYIRHPSKPLYTP 580 (655)
Q Consensus 540 g~~~~~-g~Gllss~~~~~~l~~------~~f~~~~~ir~~~~~~y~~ 580 (655)
.++|+ |+||+||..|+-|... --|-+.+.||+++.+|-.+
T Consensus 198 -~g~kiYGagi~SSp~E~~~A~~~~~p~~~pfdl~~vmRtpyrid~~Q 244 (291)
T COG3186 198 -GGLKIYGAGILSSPTELVYALESDSPNRIPFDLEQVMRTPYRIDTFQ 244 (291)
T ss_pred -ccceeecceeecCchhhhhhhcCCCcccCCcCHHHHhhcccccCccc
Confidence 88999 9999999999999832 2567778999999876555
No 16
>cd03348 pro_PheOH Prokaryotic phenylalanine-4-hydroxylase (pro_PheOH); a member of the biopterin-dependent aromatic amino acid hydroxylase family of non-heme, iron(II)-dependent enzymes that also includes the eukaryotic proteins, phenylalanine-4-hydroxylase (eu_PheOH), tyrosine hydroxylase (TyrOH) and tryptophan hydroxylase (TrpOH). PheOH catalyzes the hydroxylation of L-Phe to L-tyrosine (L-Tyr). It uses (6R)-L-erythro-5,6,7,8-tetrahydrobiopterin (BH4) as the physiological electron donor.
Probab=99.97 E-value=1.3e-32 Score=274.62 Aligned_cols=132 Identities=32% Similarity=0.551 Sum_probs=116.4
Q ss_pred CCCCCCCCCchhhhhhcCCCCccCChhHHHHHH------HHhhhcCCCChHHHHHHHhhhhhhhhhhhccCCCCCCCCeE
Q psy14589 470 PSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQ------EIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTGFSL 543 (655)
Q Consensus 470 ~~~~~y~~epd~~He~~gh~p~l~~~~~a~~~~------~~Gl~~l~~~~~~i~~l~~l~w~tve~gl~~~~~~~tg~~~ 543 (655)
....+||+|- |++ +-.|.+.+...+.. ..|+..|+++.++||+|.++| +.+.++|||++
T Consensus 6 ~~~~~YT~~e---~~~---W~~l~~r~~~~~~~~Ac~~yl~gl~~L~l~~d~IPql~~vn---------~~L~~~TGw~~ 70 (228)
T cd03348 6 QGQIDYTPEE---HAV---WRTLYERQAKLLPGRACDAFLEGLEKLGLPTDRIPDFADVS---------ERLKAATGWTV 70 (228)
T ss_pred CCcccCCHHH---HHH---HHHHHHHHHHHhhcccCHHHHHHHHHcCCCCCCCCCHHHHH---------HHHHhccCCEE
Confidence 4567899888 776 44444444443332 348888889999999999999 77888999999
Q ss_pred eecccccCCHHHHHhhhcccccccccccCCCCCCCCCCcchhhhhcCCcccccCchHHHHHHHHhhcccCCce
Q psy14589 544 RPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPY 616 (655)
Q Consensus 544 ~~g~Gllss~~~~~~l~~~~f~~~~~ir~~~~~~y~~~pd~~hd~~ghvp~l~~p~f~~~~~~~g~~~~~a~~ 616 (655)
++++||||...||++||+|+||+|+|||++++++|+||||||||+|||||||+||+||||+|+||++|++|+.
T Consensus 71 ~pV~Glip~~~Ff~~LA~r~Fp~t~~iR~~~~~~YtpEPDifHe~fGHvPmL~~p~fAdf~q~~G~~~l~a~~ 143 (228)
T cd03348 71 VAVPGLIPDDEFFEHLANRRFPVTNFIRRPEELDYLQEPDIFHDIFGHVPMLTNPVFADFMQAYGKGGLKATG 143 (228)
T ss_pred EecCCcCCHHHHHHHHhcCCCceeeeecCccccCCCCCcHHHHHHhcccHhhcCHHHHHHHHHHHHHHhCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999987
No 17
>TIGR01267 Phe4hydrox_mono phenylalanine-4-hydroxylase, monomeric form. This family is of biopterin and metal-dependent hydroxylases is related to a family of longer, multimeric aromatic amino acid hydroxylases that have additional N-terminal regulatory sequences. These include tyrosine 3-monooxygenase, phenylalanine-4-hydroxylase, and tryptophan 5-monoxygenase.
Probab=99.97 E-value=3.7e-32 Score=273.69 Aligned_cols=133 Identities=29% Similarity=0.520 Sum_probs=115.9
Q ss_pred CCCCCCCCCchhhhhhcCCCCccCChhHHHHHH------HHhhhcCCCChHHHHHHHhhhhhhhhhhhccCCCCCCCCeE
Q psy14589 470 PSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQ------EIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTGFSL 543 (655)
Q Consensus 470 ~~~~~y~~epd~~He~~gh~p~l~~~~~a~~~~------~~Gl~~l~~~~~~i~~l~~l~w~tve~gl~~~~~~~tg~~~ 543 (655)
....+||+|- |++ +-.|.+++...+.. ..|+..+|++.++||+|.++| +.++++|||++
T Consensus 6 q~~~~YT~~e---~~~---W~~l~~r~~~~~~~~Ac~~yl~gl~~lgl~~d~IPql~~vn---------~~L~~~TGw~~ 70 (248)
T TIGR01267 6 QGFDHYSEEE---HAV---WNTLITRQLKLIEGRACQEYLDGIEQLGLPHDRIPDFDEIN---------RKLQATTGWRI 70 (248)
T ss_pred CCcccCCHHH---HHH---HHHHHHHHHHHhhccccHHHHHHHHHcCCCCCCCCCHHHHH---------HHHHhccCCEE
Confidence 4457899888 666 33344444333322 348888899999999999999 77888999999
Q ss_pred eecccccCCHHHHHhhhcccccccccccCCCCCCCCCCcchhhhhcCCcccccCchHHHHHHHHhhcccCCceE
Q psy14589 544 RPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPYL 617 (655)
Q Consensus 544 ~~g~Gllss~~~~~~l~~~~f~~~~~ir~~~~~~y~~~pd~~hd~~ghvp~l~~p~f~~~~~~~g~~~~~a~~~ 617 (655)
++++||||...||++||+|+||+|+|||++++++|+||||+|||+|||||||+||+||+|+|+||++|++|+..
T Consensus 71 ~pV~Gli~~~~Ff~~LA~r~Fp~t~~iR~~~~~~YtpEPDifHe~fGH~P~L~~P~FA~f~q~~G~~~l~a~~~ 144 (248)
T TIGR01267 71 AAVPGLIPFQTFFEHLANRRFPVTTWLRTPEELDYLQEPDIFHDIFGHVPLLTNPVFADFTHTYGKLGLKASAL 144 (248)
T ss_pred EecCCcCCHHHHHHHHhcCccceeeeecCccccCCCCCchHHHHHhccccccCChHHHHHHHHHHHHHhCCCch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999853
No 18
>cd00361 arom_aa_hydroxylase Biopterin-dependent aromatic amino acid hydroxylase; a family of non-heme, iron(II)-dependent enzymes that includes prokaryotic and eukaryotic phenylalanine-4-hydroxylase (PheOH), eukaryotic tyrosine hydroxylase (TyrOH) and eukaryotic tryptophan hydroxylase (TrpOH). PheOH converts L-phenylalanine to L-tyrosine, an important step in phenylalanine catabolism and neurotransmitter biosynthesis, and is linked to a severe variant of phenylketonuria in humans. TyrOH and TrpOH are involved in the biosynthesis of catecholamine and serotonin, respectively. The eukaryotic enzymes are all homotetramers.
Probab=99.97 E-value=4.4e-32 Score=270.04 Aligned_cols=129 Identities=53% Similarity=0.793 Sum_probs=112.3
Q ss_pred CCCCCCchhhhhhcCCCCccCChhHHHHHH------HHhhhcCCCChHHHHHHHhhhhhhhhhhhccCCCCCCCCeEeec
Q psy14589 473 PLYTPEPDVCHELLGHVPLFADPSFAQFSQ------EIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTGFSLRPV 546 (655)
Q Consensus 473 ~~y~~epd~~He~~gh~p~l~~~~~a~~~~------~~Gl~~l~~~~~~i~~l~~l~w~tve~gl~~~~~~~tg~~~~~g 546 (655)
.+||+|- |++ +-.|.+.+...+.. ..|+..|+.+.++||+|.++| +.+.++|||+++++
T Consensus 3 ~~YT~~e---~~~---W~~l~~r~~~~~~~~Ac~~yl~gl~~l~l~~d~IPql~~in---------~~L~~~TGw~~~pV 67 (221)
T cd00361 3 VDYTEEE---HAT---WRTLYRRLKKLLPTHACREYLEGLELLGLPEDRIPQLEDVS---------EFLKALTGWTLVPV 67 (221)
T ss_pred CcCCHHH---HHH---HHHHHHHHHHHhccccCHHHHHHHHHcCCCCCCCCCHHHHH---------HHHHhhcCCEEEec
Confidence 5677777 555 33333333333322 358888889999999999999 78888999999999
Q ss_pred ccccCCHHHHHhhhcccccccccccCCCCCCCCCCcchhhhhcCCcccccCchHHHHHHHHhhcccCCce
Q psy14589 547 AGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPY 616 (655)
Q Consensus 547 ~Gllss~~~~~~l~~~~f~~~~~ir~~~~~~y~~~pd~~hd~~ghvp~l~~p~f~~~~~~~g~~~~~a~~ 616 (655)
+||||...||++||+|+||+|+|||++++++|+||||+|||+|||||||+||+||||+|+||++|++|+.
T Consensus 68 ~gli~~~~Ff~~LA~r~Fp~t~~iR~~~~~~YtpEPDifHe~~GH~P~L~~p~fAdf~q~~G~~~l~a~~ 137 (221)
T cd00361 68 AGLISPRDFFALLAFRVFPVTQYIRHPEEPDYTPEPDIFHELFGHVPLLADPSFADFSQEYGLASLGASD 137 (221)
T ss_pred CCcCCHHHHHHHHhcCCCceeeeecCcCCCCCCCCChhHHHHhccchhhcCHHHHHHHHHHHHHHhCcCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999986
No 19
>PRK11913 phhA phenylalanine 4-monooxygenase; Reviewed
Probab=99.97 E-value=5.1e-32 Score=277.19 Aligned_cols=139 Identities=32% Similarity=0.530 Sum_probs=119.4
Q ss_pred eeeccCCCCCCCCCCchhhhhhcCCCCccCChhHHHHHH------HHhhhcCCCChHHHHHHHhhhhhhhhhhhccCCCC
Q psy14589 464 TQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQ------EIGLASLGAPDEYVERLATSNNFMIVPRLASLSPD 537 (655)
Q Consensus 464 t~~ir~~~~~~y~~epd~~He~~gh~p~l~~~~~a~~~~------~~Gl~~l~~~~~~i~~l~~l~w~tve~gl~~~~~~ 537 (655)
++|+-.....+||+|- |++ +-.|.+.+...+.. ..|+..||++.++||+|.++| +.+++
T Consensus 16 ~~y~~~q~~~~YT~~e---~~~---W~~l~~r~~~~~~~~Ac~~yl~gl~~L~l~~d~IPql~~in---------~~L~~ 80 (275)
T PRK11913 16 ADYTADQPWIDYTAEE---HAI---WQTLYERQLALLPGRACDEFLEGLEALGLPKDRIPQLDEIN---------RVLQA 80 (275)
T ss_pred HhccCCCCcccCCHHH---HHH---HHHHHHHHHHHhccccCHHHHHHHHHcCCCCCCCCCHHHHH---------HHHHh
Confidence 4566445578999998 766 33344443333322 347888889999999999999 78888
Q ss_pred CCCCeEeecccccCCHHHHHhhhcccccccccccCCCCCCCCCCcchhhhhcCCcccccCchHHHHHHHHhhcccCCceE
Q psy14589 538 STGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPYL 617 (655)
Q Consensus 538 ~tg~~~~~g~Gllss~~~~~~l~~~~f~~~~~ir~~~~~~y~~~pd~~hd~~ghvp~l~~p~f~~~~~~~g~~~~~a~~~ 617 (655)
+|||++++++||||...||++||+|+||+|+|||++++++|+||||||||+|||||||+||+||||+|+||++|++|+..
T Consensus 81 ~TGw~~~pV~Glip~~~Ff~~LA~r~Fp~t~~IR~~~~~~YtpEPDifHevfGHvPmL~~p~FAdf~q~~G~~~l~a~~~ 160 (275)
T PRK11913 81 ATGWQVVPVPGLIPFDVFFELLANRRFPVATFIRRPEELDYLQEPDIFHDVFGHVPLLTNPVFADFMQAYGKLGLRASKE 160 (275)
T ss_pred hcCCEEEecCccCCHHHHHHHHhcCccceeeeecCccccCCCCCCchHHHHhccchhhcCHHHHHHHHHHHHHHhCcChh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998753
No 20
>cd03346 eu_TrpOH Eukaryotic tryptophan hydroxylase (TrpOH); a member of the biopterin-dependent aromatic amino acid hydroxylase family of non-heme, iron(II)-dependent enzymes that also includes prokaryotic and eukaryotic phenylalanine-4-hydroxylase (PheOH) and eukaryotic tyrosine hydroxylase (TyrOH). TrpOH oxidizes L-tryptophan to 5-hydroxy-L-tryptophan, the rate-limiting step in the biosynthesis of serotonin (5-hydroxytryptamine), a widely distributed hormone and neurotransmitter.
Probab=99.96 E-value=7.5e-31 Score=268.47 Aligned_cols=147 Identities=52% Similarity=0.831 Sum_probs=120.4
Q ss_pred HHHHHhhhcCccceeeec--cCCCCCCCCCCchhhhhh--------cCCCCccCChhHHHHHHHHhhhcCCCChHHHHHH
Q psy14589 450 RDFLAGLAFRVFHSTQYI--RHPSKPLYTPEPDVCHEL--------LGHVPLFADPSFAQFSQEIGLASLGAPDEYVERL 519 (655)
Q Consensus 450 ~~f~~~la~r~f~~t~~i--r~~~~~~y~~epd~~He~--------~gh~p~l~~~~~a~~~~~~Gl~~l~~~~~~i~~l 519 (655)
|..++.+| ++|. -+....+||+|- |++ ..-.|=.|.++|-+-++.++ +..|++.++||+|
T Consensus 40 r~~~a~~a------~~y~~g~~ip~i~YT~~E---~~~W~~l~~r~~~l~~~~Ac~eyl~gl~~L~-~~~gl~~d~IPql 109 (287)
T cd03346 40 RKYFADVA------MNYKHGDPIPRVEYTEEE---IKTWGTVYRELNRLYPTHACREYLKNLPLLE-KHCGYREDNIPQL 109 (287)
T ss_pred HHHHHHHH------hhccCCCCCCccccCHHH---HHHHHHHHHHHHHHhhccccHHHHHHHHHHH-hccCCCcCCCCCH
Confidence 45566554 5666 333366899997 554 33334444444444333332 3456899999999
Q ss_pred HhhhhhhhhhhhccCCCCCCCCeEeecccccCCHHHHHhhhcccccccccccCCCCCCCCCCcchhhhhcCCcccccCch
Q psy14589 520 ATSNNFMIVPRLASLSPDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPS 599 (655)
Q Consensus 520 ~~l~w~tve~gl~~~~~~~tg~~~~~g~Gllss~~~~~~l~~~~f~~~~~ir~~~~~~y~~~pd~~hd~~ghvp~l~~p~ 599 (655)
.++| +.+.+.|||++++|+||||+..||++||+|+||+|+|||++++++|+||||||||++||||||+||+
T Consensus 110 ~dvn---------~~L~~~TGw~~~pV~Gli~~~~Ff~~LA~r~Fp~t~~IR~~~~~~YtpEPDifHEl~GHvPlLadp~ 180 (287)
T cd03346 110 EDVS---------RFLKERTGFTIRPVAGYLSPRDFLAGLAFRVFHCTQYVRHSSDPFYTPEPDTCHELLGHVPLLADPS 180 (287)
T ss_pred HHHH---------HHHHhccCCEEEecCCcCCHHHHHHHHhcCcccceeeecCccccCCCCCCchHHHHhccchhhcCHH
Confidence 9999 7788899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCc
Q psy14589 600 FAQFSQEIGLASLGAP 615 (655)
Q Consensus 600 f~~~~~~~g~~~~~a~ 615 (655)
||||+|+||++|++|+
T Consensus 181 FA~f~q~~G~~~l~a~ 196 (287)
T cd03346 181 FAQFSQEIGLASLGAS 196 (287)
T ss_pred HHHHHHHHHHHhcCCC
Confidence 9999999999999986
No 21
>cd03347 eu_PheOH Eukaryotic phenylalanine-4-hydroxylase (eu_PheOH); a member of the biopterin-dependent aromatic amino acid hydroxylase family of non-heme, iron(II)-dependent enzymes that also includes prokaryotic phenylalanine-4-hydroxylase (pro_PheOH), eukaryotic tyrosine hydroxylase (TyrOH) and eukaryotic tryptophan hydroxylase (TrpOH). PheOH catalyzes the first and rate-limiting step in the metabolism of the amino acid L-phenylalanine (L-Phe), the hydroxylation of L-Phe to L-tyrosine (L-Tyr). It uses (6R)-L-erythro-5,6,7,8-tetrahydrobiopterin (BH4) as the physiological electron donor. The catalytic activity of the tetrameric enzyme is tightly regulated by the binding of L-Phe and BH4 as well as by phosphorylation. Mutations in the human enzyme are linked to a severe variant of phenylketonuria.
Probab=99.96 E-value=4.5e-31 Score=271.81 Aligned_cols=150 Identities=59% Similarity=0.908 Sum_probs=122.8
Q ss_pred HHHHHhhhcCccceeeec--cCCCCCCCCCCc-----hhhhhhcCCCCccCChhHHHHHHHHhhhcCCCChHHHHHHHhh
Q psy14589 450 RDFLAGLAFRVFHSTQYI--RHPSKPLYTPEP-----DVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATS 522 (655)
Q Consensus 450 ~~f~~~la~r~f~~t~~i--r~~~~~~y~~ep-----d~~He~~gh~p~l~~~~~a~~~~~~Gl~~l~~~~~~i~~l~~l 522 (655)
|..++.+| ++|. -+....+||+|- -++..+..-.|-.|.++|-+-+..+ +..+|++.++||+|.++
T Consensus 40 r~~~a~~a------~~y~~g~~ip~v~YT~eE~~~W~~l~~r~~~l~~~~Ac~eyl~~l~~L-~~~~gl~~d~IPql~dv 112 (306)
T cd03347 40 RKEFADIA------YNYKHGQPIPRVEYTEEEKKTWGTVFRELKSLYPTHACYEYNHVFPLL-EKNCGFSEDNIPQLEDV 112 (306)
T ss_pred HHHHHHHH------HhccCCCCCCcCcCCHHHHHHHHHHHHHHHHHhccccCHHHHHHHHHH-HHhcCCCcCCCCCHHHH
Confidence 55666666 5565 444467899997 2223333444555555544433222 24558999999999999
Q ss_pred hhhhhhhhhccCCCCCCCCeEeecccccCCHHHHHhhhcccccccccccCCCCCCCCCCcchhhhhcCCcccccCchHHH
Q psy14589 523 NNFMIVPRLASLSPDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQ 602 (655)
Q Consensus 523 ~w~tve~gl~~~~~~~tg~~~~~g~Gllss~~~~~~l~~~~f~~~~~ir~~~~~~y~~~pd~~hd~~ghvp~l~~p~f~~ 602 (655)
| +.+.+.|||++++|+||||+..||++||+|+||+|+|||++++++|+||||+|||++||||||+||+|||
T Consensus 113 n---------~~L~~~TGw~~~pV~Gli~~~~Ff~~LA~R~Fp~t~yIR~~~~~~YtpEPDifHEl~GHvPlLadp~FA~ 183 (306)
T cd03347 113 S---------NFLQTCTGFRLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPMYTPEPDICHELLGHVPLFADPSFAQ 183 (306)
T ss_pred H---------HHHHhccCCEEEecCccCCHHHHHHHHhcCccceeeeecCccccCCCCCCchHHHHhccchhhcCHHHHH
Confidence 9 7788899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccCCc
Q psy14589 603 FSQEIGLASLGAP 615 (655)
Q Consensus 603 ~~~~~g~~~~~a~ 615 (655)
|+|++|++|++|+
T Consensus 184 f~q~~G~~~l~a~ 196 (306)
T cd03347 184 FSQEIGLASLGAP 196 (306)
T ss_pred HHHHHHHHhcCCC
Confidence 9999999999998
No 22
>cd03345 eu_TyrOH Eukaryotic tyrosine hydroxylase (TyrOH); a member of the biopterin-dependent aromatic amino acid hydroxylase family of non-heme, iron(II)-dependent enzymes that also includes prokaryotic and eukaryotic phenylalanine-4-hydroxylase (PheOH) and eukaryotic tryptophan hydroxylase (TrpOH). TyrOH catalyzes the conversion of tyrosine to L-dihydroxyphenylalanine (L-DOPA), the rate-limiting step in the biosynthesis of the catecholamines dopamine, noradrenaline, and adrenaline.
Probab=99.96 E-value=2.9e-30 Score=264.98 Aligned_cols=145 Identities=50% Similarity=0.784 Sum_probs=118.9
Q ss_pred HHHHHhhhcCccceeeeccCC---CCCCCCCCchhhhhhcCCCCccCChhHHHHHH------HHhhhcC----CCChHHH
Q psy14589 450 RDFLAGLAFRVFHSTQYIRHP---SKPLYTPEPDVCHELLGHVPLFADPSFAQFSQ------EIGLASL----GAPDEYV 516 (655)
Q Consensus 450 ~~f~~~la~r~f~~t~~ir~~---~~~~y~~epd~~He~~gh~p~l~~~~~a~~~~------~~Gl~~l----~~~~~~i 516 (655)
|..++.+| ++|. +. ...+||+|- |++ +-.|.+.....+.. ..|+..| |++.++|
T Consensus 39 r~~~a~~a------~~y~-~g~~ip~v~YT~eE---~~~---W~~l~~r~~~l~~~~Ac~eyl~gl~~L~~~~gl~~d~I 105 (298)
T cd03345 39 RKLIAEIA------FQYK-HGDPIPRVEYTAEE---IAT---WKEVYKTLKDLHATHACKEYLDAFQLLEKECGYSEDRI 105 (298)
T ss_pred HHHHHHHH------hcCc-CCCCCCcccCCHHH---HHH---HHHHHHHHHHHHhhhhhHHHHHHHHHHHhccCCCCCCC
Confidence 55666666 4555 33 245788887 665 33333333332222 2355555 8999999
Q ss_pred HHHHhhhhhhhhhhhccCCCCCCCCeEeecccccCCHHHHHhhhcccccccccccCCCCCCCCCCcchhhhhcCCccccc
Q psy14589 517 ERLATSNNFMIVPRLASLSPDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFA 596 (655)
Q Consensus 517 ~~l~~l~w~tve~gl~~~~~~~tg~~~~~g~Gllss~~~~~~l~~~~f~~~~~ir~~~~~~y~~~pd~~hd~~ghvp~l~ 596 (655)
|+|.++| +.+.+.|||++++|+||||+..||++||+|+||+|+|||++++++|+||||||||++||||||+
T Consensus 106 Pql~dvn---------~~L~~~TGw~~~pV~Gli~~~~Ff~~LA~R~Fp~t~yIR~~~~~~YtpEPDi~HEl~GHvPlLa 176 (298)
T cd03345 106 PQLEDVS---------EFLKERTGFQLRPVAGLLSARDFLASLAFRVFQCTQYIRHASSPMHSPEPDCCHELLGHVPMLA 176 (298)
T ss_pred CCHHHHH---------HHHHhccCCEEEecCccCCHHHHHHHHhcCcccccceecCCcccCCCCCCchHHHHhccchhhC
Confidence 9999999 7778899999999999999999999999999999999999999999999999999999999999
Q ss_pred CchHHHHHHHHhhcccCCce
Q psy14589 597 DPSFAQFSQEIGLASLGAPY 616 (655)
Q Consensus 597 ~p~f~~~~~~~g~~~~~a~~ 616 (655)
||+||||+|+||++|++|+.
T Consensus 177 dp~FA~f~q~~G~~~l~a~~ 196 (298)
T cd03345 177 DPTFAQFSQDIGLASLGASD 196 (298)
T ss_pred CHHHHHHHHHHHHHhcCCCH
Confidence 99999999999999999863
No 23
>COG3186 Phenylalanine-4-hydroxylase [Amino acid transport and metabolism]
Probab=99.96 E-value=4.2e-30 Score=254.18 Aligned_cols=124 Identities=32% Similarity=0.503 Sum_probs=111.6
Q ss_pred hhhhcCCCCccCChhHHHH----HHH--HhhhcCCCChHHHHHHHhhhhhhhhhhhccCCCCCCCCeEeecccccCCHHH
Q psy14589 482 CHELLGHVPLFADPSFAQF----SQE--IGLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTGFSLRPVAGLLSSRDF 555 (655)
Q Consensus 482 ~He~~gh~p~l~~~~~a~~----~~~--~Gl~~l~~~~~~i~~l~~l~w~tve~gl~~~~~~~tg~~~~~g~Gllss~~~ 555 (655)
=|.+ +--|.++++.-. +|+ -|+..+|++.++||+++++| +.++++|||++.+|+||||...|
T Consensus 46 eh~v---W~tL~~rq~~l~~~rac~~fLdgle~lgL~~~~ipd~~~in---------~~l~~~Tgw~v~~Vpglvp~~~f 113 (291)
T COG3186 46 EHAV---WRTLIDRQTKLLKGRACQEFLDGLEALGLPLSRIPDFDEIN---------RVLQRETGWQVVAVPGLVPFDVF 113 (291)
T ss_pred HHHH---HHHHHHHHHHHHhccchHHHHHHHHHcCCCcccCCCHHHHH---------HHHHHhcCcEEEecCccCChHHH
Confidence 3666 555666666532 233 39999999999999999999 88899999999999999999999
Q ss_pred HHhhhcccccccccccCCCCCCCCCCcchhhhhcCCcccccCchHHHHHHHHhhcccCCceE
Q psy14589 556 LAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGAPYL 617 (655)
Q Consensus 556 ~~~l~~~~f~~~~~ir~~~~~~y~~~pd~~hd~~ghvp~l~~p~f~~~~~~~g~~~~~a~~~ 617 (655)
|+|||+|+||+++|||+++++||++|||+|||+|||||||+||+||+|+|.||++|.||.-+
T Consensus 114 f~lLanrrFPva~~mRt~~eldylqePD~fHdvfGHvP~Lt~P~FAdf~~~yG~lg~ka~~~ 175 (291)
T COG3186 114 FDLLANRRFPVATFMRTPDELDYLQEPDIFHDVFGHVPMLTHPVFADFMQAYGKLGLKAIEL 175 (291)
T ss_pred HHHHhhccCcHHHHhcCHhhcccccCccHHHHHhccCchhcCchHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999998644
No 24
>TIGR01269 Tyr_3_monoox tyrosine 3-monooxygenase, tetrameric. This model describes tyrosine 3-monooxygenase, a member of the family of tetrameric, biopterin-dependent aromatic amino acid hydroxylases found in metazoans. It is closely related to tetrameric phenylalanine-4-hydroxylase and tryptophan 5-monooxygenase, and more distantly related to the monomeric phenylalanine-4-hydroxylase found in some Gram-negative bacteria.
Probab=99.95 E-value=1.9e-29 Score=269.90 Aligned_cols=154 Identities=48% Similarity=0.668 Sum_probs=124.8
Q ss_pred hHHHHHhhhcCccceeeeccCCCCCCCCCCc-----hhhhhhcCCCCccCChhHHHHHHHHhhhcCCCChHHHHHHHhhh
Q psy14589 449 SRDFLAGLAFRVFHSTQYIRHPSKPLYTPEP-----DVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLATSN 523 (655)
Q Consensus 449 ~~~f~~~la~r~f~~t~~ir~~~~~~y~~ep-----d~~He~~gh~p~l~~~~~a~~~~~~Gl~~l~~~~~~i~~l~~l~ 523 (655)
-|..++.+|+ ..+|--.....+||+|- -++..+..-.|-.|.++|-+-++.++ ...|++.++||+|.++|
T Consensus 162 RR~~~a~~a~----~~~~g~~iP~v~YT~eE~~tW~~l~~rl~~l~~~~Ac~eyl~gl~~L~-~~~gl~~d~IPqL~dvs 236 (457)
T TIGR01269 162 RREAIAEIAF----QYKYGDPIPEVEYTKEEIETWRLVFTTMKDLHASHACREYIDAFQLLE-KYCNYNSESIPQLQTIS 236 (457)
T ss_pred HHHHHHHHhh----hccCCCCCCcCccCHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHH-hhcCCCcCCCCCHHHHH
Confidence 3667777776 33444555577899998 12233333345555555544444433 33568999999999999
Q ss_pred hhhhhhhhccCCCCCCCCeEeecccccCCHHHHHhhhcccccccccccCCCCCCCCCCcchhhhhcCCcccccCchHHHH
Q psy14589 524 NFMIVPRLASLSPDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQF 603 (655)
Q Consensus 524 w~tve~gl~~~~~~~tg~~~~~g~Gllss~~~~~~l~~~~f~~~~~ir~~~~~~y~~~pd~~hd~~ghvp~l~~p~f~~~ 603 (655)
+.+.+.|||++++++||||+..||++||+|+||+|+|||++++++|+||||||||++||||||+||+||||
T Consensus 237 ---------~~L~~~TGw~l~pV~GLl~~rdF~~~LA~RvFp~TqyIR~~~~~~YtpEPDi~HEl~GHvPlLadp~FA~F 307 (457)
T TIGR01269 237 ---------EFLHRTTGFRLRPVAGLLSARDFLASLAFRVFQCTQYIRHHSSPMHTPEPDCIHELLGHMPMLADRQFAQF 307 (457)
T ss_pred ---------HHHHhccCCEEEeccccCCHHHHHHHHhcCcccceeeecCccccCCCCCCchHHHHhcccccccCHHHHHH
Confidence 77788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccCCce
Q psy14589 604 SQEIGLASLGAPY 616 (655)
Q Consensus 604 ~~~~g~~~~~a~~ 616 (655)
+|+||++|++|+.
T Consensus 308 ~q~~G~asl~As~ 320 (457)
T TIGR01269 308 SQEIGLASLGASE 320 (457)
T ss_pred HHHHHHHhcCCCH
Confidence 9999999999864
No 25
>TIGR01268 Phe4hydrox_tetr phenylalanine-4-hydroxylase, tetrameric form. The member of this family from Drosophila has been described as having both phenylalanine-4-hydroxylase and tryptophan 5-monoxygenase activity (PubMed:1371286). However, a Drosophila member of the tryptophan 5-monoxygenase clade has subsequently been discovered.
Probab=99.95 E-value=3.7e-29 Score=270.51 Aligned_cols=152 Identities=56% Similarity=0.859 Sum_probs=125.4
Q ss_pred hHHHHHhhhcCccceeeec--cCCCCCCCCCCc-----hhhhhhcCCCCccCChhHHHHHHHHhhhcCCCChHHHHHHHh
Q psy14589 449 SRDFLAGLAFRVFHSTQYI--RHPSKPLYTPEP-----DVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLAT 521 (655)
Q Consensus 449 ~~~f~~~la~r~f~~t~~i--r~~~~~~y~~ep-----d~~He~~gh~p~l~~~~~a~~~~~~Gl~~l~~~~~~i~~l~~ 521 (655)
-|..++.+| ++|. -.....+||+|- -++..+..-.|-.|.++|-+-+..+. ..+|++.++||+|.+
T Consensus 141 rr~~~a~~a------~~y~~g~~ip~v~YT~~e~~~W~~l~~~~~~l~~~~Ac~eyl~~l~~L~-~~~g~~~d~IPql~d 213 (436)
T TIGR01268 141 RRKQFADIA------FNYKHGQPIPRVEYTDEEIATWRTVFNNLTVLYPTHACQEYNHIFPLLQ-QNCGFREDNIPQLED 213 (436)
T ss_pred HHHHHHHHH------hhCCCCCCCCccccCHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHH-HhcCCCccCCCCHHH
Confidence 356666666 5565 344456799997 12233444455556665555444432 567799999999999
Q ss_pred hhhhhhhhhhccCCCCCCCCeEeecccccCCHHHHHhhhcccccccccccCCCCCCCCCCcchhhhhcCCcccccCchHH
Q psy14589 522 SNNFMIVPRLASLSPDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFA 601 (655)
Q Consensus 522 l~w~tve~gl~~~~~~~tg~~~~~g~Gllss~~~~~~l~~~~f~~~~~ir~~~~~~y~~~pd~~hd~~ghvp~l~~p~f~ 601 (655)
+| +.+.+.|||++++++||||+..||++||+|+||+|+|||++++++|+||||||||++||||||+||+||
T Consensus 214 vs---------~~L~~~TGw~~~pV~Gll~~~~F~~~LA~r~F~~t~yiR~~~~~~YtpEPDi~Hel~GHvPlla~p~fA 284 (436)
T TIGR01268 214 VS---------QFLQDCTGFTLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHHSKPMYTPEPDICHELLGHVPLFADVEFA 284 (436)
T ss_pred HH---------HHHHhccCCEEEecCCcCCHHHHHHHHhcCccceeeeecccccccCCCCChhHHHHhccchhhCCHHHH
Confidence 99 777889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcccCCce
Q psy14589 602 QFSQEIGLASLGAPY 616 (655)
Q Consensus 602 ~~~~~~g~~~~~a~~ 616 (655)
||+|++|++|++|+.
T Consensus 285 ~f~q~~G~~~l~a~~ 299 (436)
T TIGR01268 285 QFSQEIGLASLGAPD 299 (436)
T ss_pred HHHHHHHHhhcCCCH
Confidence 999999999999975
No 26
>TIGR01270 Trp_5_monoox tryptophan 5-monooxygenase, tetrameric. This model describes tryptophan 5-monooxygenase, a member of the family of tetrameric, biopterin-dependent aromatic amino acid hydroxylases found in metazoans. It is closely related to tetrameric phenylalanine-4-hydroxylase and tyrosine 3-monooxygenase, and more distantly related to the monomeric phenylalanine-4-hydroxylase found in some Gram-negative bacteria.
Probab=99.95 E-value=3.1e-29 Score=271.61 Aligned_cols=149 Identities=50% Similarity=0.778 Sum_probs=122.3
Q ss_pred hHHHHHhhhcCccceeeec--cCCCCCCCCCCchhhhhh--------cCCCCccCChhHHHHHHHHhhhcCCCChHHHHH
Q psy14589 449 SRDFLAGLAFRVFHSTQYI--RHPSKPLYTPEPDVCHEL--------LGHVPLFADPSFAQFSQEIGLASLGAPDEYVER 518 (655)
Q Consensus 449 ~~~f~~~la~r~f~~t~~i--r~~~~~~y~~epd~~He~--------~gh~p~l~~~~~a~~~~~~Gl~~l~~~~~~i~~ 518 (655)
-|..++.+| ++|. -.....+||||- |++ ..-.|-.|.++|-+-+..+. ...|++.++||+
T Consensus 168 rr~~~a~~a------~~y~~g~~ip~v~YT~~E---~~~W~~l~~~~~~l~~~~Ac~eyl~gl~~L~-~~~g~~~d~IPq 237 (464)
T TIGR01270 168 RRMMFADLA------LNYKHGEPIPRVEYTEEE---RKTWGTIYRELRRLYKTHACKEFLDNLPLLE-KYCGYREDNIPQ 237 (464)
T ss_pred HHHHHHHHH------HhccCCCCCCccccCHHH---HHHHHHHHHHHHHHhhccccHHHHHHHHHHH-hhcCCCccCCCC
Confidence 466777776 4555 344456799998 554 33344445554444333331 233789999999
Q ss_pred HHhhhhhhhhhhhccCCCCCCCCeEeecccccCCHHHHHhhhcccccccccccCCCCCCCCCCcchhhhhcCCcccccCc
Q psy14589 519 LATSNNFMIVPRLASLSPDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADP 598 (655)
Q Consensus 519 l~~l~w~tve~gl~~~~~~~tg~~~~~g~Gllss~~~~~~l~~~~f~~~~~ir~~~~~~y~~~pd~~hd~~ghvp~l~~p 598 (655)
|.++| +.+.++|||++++++||||+..||++||+|+||+|+|||++++++|+||||||||+|||||||+||
T Consensus 238 l~dvs---------~~L~~~TGw~~~pV~Gll~~r~F~~~LA~R~F~~tqyIR~~~~~~YtpEPDi~HEl~GHvPlLadp 308 (464)
T TIGR01270 238 LEDVS---------KFLKAKTGFRLRPVAGYLSARDFLSGLAFRVFHCTQYVRHSADPFYTPEPDTCHELLGHMPLLADP 308 (464)
T ss_pred HHHHH---------HHHHhccCCEEEeccccCCHHHHHHHHhcCccceeeeeccccccCcCCCCchHHHHhcccchhcCH
Confidence 99999 777789999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhhcccCCce
Q psy14589 599 SFAQFSQEIGLASLGAPY 616 (655)
Q Consensus 599 ~f~~~~~~~g~~~~~a~~ 616 (655)
+||||+|+||++|++|+.
T Consensus 309 ~FA~f~q~~G~~sl~a~~ 326 (464)
T TIGR01270 309 SFAQFSQEIGLASLGASE 326 (464)
T ss_pred HHHHHHHHHHHhhcCCCH
Confidence 999999999999999863
No 27
>PRK14055 aromatic amino acid hydroxylase; Provisional
Probab=99.94 E-value=1.3e-28 Score=253.85 Aligned_cols=119 Identities=25% Similarity=0.370 Sum_probs=106.3
Q ss_pred hhhcCCCCccCChhHHHHHH------HHhhhcCCCChHHHHHHHhhhhhhhhhhhccCCCCCCCCeEeecccccCCHHHH
Q psy14589 483 HELLGHVPLFADPSFAQFSQ------EIGLASLGAPDEYVERLATSNNFMIVPRLASLSPDSTGFSLRPVAGLLSSRDFL 556 (655)
Q Consensus 483 He~~gh~p~l~~~~~a~~~~------~~Gl~~l~~~~~~i~~l~~l~w~tve~gl~~~~~~~tg~~~~~g~Gllss~~~~ 556 (655)
|++ |--|..++.+.+.. ..|++.++++.+ +|.+.++| +.+++.|||++++|+||||...||
T Consensus 104 h~i---W~~L~~RQl~ll~~~Ac~eYLeGl~~L~L~~D-~~~L~eVn---------~~L~~~TGW~v~pVpGLIp~~~Ff 170 (362)
T PRK14055 104 RNL---WYRLLSSRFSLWKSYCPRFFLDYLEAFGLLSD-FLDHQAVI---------KFFELETHFSYYPVSGFVAPHQYL 170 (362)
T ss_pred HHH---HHHHHHHHHHHHhhhccHHHHHHHHhcCCCcc-cCChHHHH---------HHHHhccCCEEEecCCcCCHHHHH
Confidence 666 44566666666544 248888889888 77789999 777899999999999999999999
Q ss_pred HhhhcccccccccccCCCCCCCCCCcchhhhhcCCcccccCchHHHHHHHHhhcccCC
Q psy14589 557 AGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGA 614 (655)
Q Consensus 557 ~~l~~~~f~~~~~ir~~~~~~y~~~pd~~hd~~ghvp~l~~p~f~~~~~~~g~~~~~a 614 (655)
++||+|+||+|+|||++++++|+||||+|||+|||||||+||+||+|+|+||++|++|
T Consensus 171 ~~LA~R~FPvttyIR~~ee~dYtpEPDifHEvfGHvPmLanP~FAdF~q~~G~~glkA 228 (362)
T PRK14055 171 SLLQDRYFPIASVMRTLDKDNFSLTPDLIHDLLGHVPWLLHPSFSEFFINMGRLFTKV 228 (362)
T ss_pred HHHhcCeeceeeeeccccccCCCCCchHHHHhhccchhhcCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999987
No 28
>PRK14056 phenylalanine 4-monooxygenase; Provisional
Probab=99.94 E-value=2.1e-28 Score=266.92 Aligned_cols=135 Identities=24% Similarity=0.398 Sum_probs=114.5
Q ss_pred eeeccCCCCCCCCCCchhhhhhcCCCCccCChhHHHH------HHHHhhhcCCCChHHHHHHHhhhhhhhhhhhccCCCC
Q psy14589 464 TQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQF------SQEIGLASLGAPDEYVERLATSNNFMIVPRLASLSPD 537 (655)
Q Consensus 464 t~~ir~~~~~~y~~epd~~He~~gh~p~l~~~~~a~~------~~~~Gl~~l~~~~~~i~~l~~l~w~tve~gl~~~~~~ 537 (655)
.+|+-.....+|||+- |.+ |-.+.......+ ....|+..+|++.++||+|.++| +.+.
T Consensus 10 ~~~v~~Q~y~~YT~~e---hav---Wr~v~~r~~~~l~~~Ac~~YL~GL~~lgl~~d~IPql~emN---------~~L~- 73 (578)
T PRK14056 10 KPFVSPQHYDQYTPVD---HAV---WRYVMRQNHSFLKDVAHPAYLNGLQSTGINIERIPKVEEMN---------ECLA- 73 (578)
T ss_pred HhhccCCChhhCCHHH---HHH---HHHHHHHHHHHhccccCHHHHHHHHHcCCCccCCCCHHHHH---------HHHH-
Confidence 4566666788999998 665 322333322222 22357788999999999999999 5554
Q ss_pred CCCCeEeecccccCCHHHHHhhhcccccccccccCCCCCCCCCCcchhhhhcCCcccccCchHHHHHHHHhhcccCC
Q psy14589 538 STGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQEIGLASLGA 614 (655)
Q Consensus 538 ~tg~~~~~g~Gllss~~~~~~l~~~~f~~~~~ir~~~~~~y~~~pd~~hd~~ghvp~l~~p~f~~~~~~~g~~~~~a 614 (655)
+|||++++++||||...||++||+|+||+|+|||++++++|+||||||||++||+|||+||+||+|+|+||++|++|
T Consensus 74 ~tGW~~vpV~GlIp~~~Ffe~LA~rvFpit~~IR~~e~i~YtPEPDIfHE~~GH~P~LadP~fAdf~q~~G~iG~kA 150 (578)
T PRK14056 74 EIGWGAVAVDGFIPPVAFFEFQGHGVLPIATDIRKVENIEYTPAPDIIHEAAGHAPILADPTYAEYLRRFGEIGAKA 150 (578)
T ss_pred HcCCEEEeccccCCHHHHHHHHhcCeeceeeeeccccccCCCCCCchhhhhhccchhhcCHHHHHHHHHHHHHHHhh
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999987
No 29
>PF00351 Biopterin_H: Biopterin-dependent aromatic amino acid hydroxylase; InterPro: IPR019774 Phenylalanine, tyrosine and tryptophan hydroxylases constitute a family of tetrahydrobiopterin-dependent aromatic amino acid hydroxylases, all of which are rate-limiting catalysts for important metabolic pathways []. The proteins are structurally and functionally related, each containing iron, and catalysing ring hydroxylation of aromatic amino acids, using tetra-hydrobiopterin (BH4) as a substrate. All are regulated by phosphorylation at serines in their N-termini. It has been suggested that the proteins each contain a conserved C-terminal catalytic (C) domain and an unrelated N-terminal regulatory (R) domain. It is possible that the R domains arose from genes that were recruited from different sources to combine with the common gene for the catalytic core. Thus, by combining with the same C domain, the proteins acquired the unique regulatory properties of the separate R domains. A variety of enzymes belong to this family that includes, phenylalanine-4-hydroxylase from Chromobacterium violaceum where it is copper-dependent; it is iron-dependent in Pseudomonas aeruginosa, phenylalanine-4-hydroxylase catalyzes the conversion of phenylalanine to tyrosine. In humans, deficiencies are the cause of phenylketonuria, the most common inborn error of amino acid metabolism [], tryptophan 5-hydroxylase catalyzes the rate-limiting step in serotonin biosynthesis: the conversion of tryptophan to 3-hydroxy-anthranilate and tyrosine 3-hydroxylase catalyzes the rate limiting step in catecholamine biosynthesis: the conversion of tyrosine to 3,4-dihydroxy-L-phenylalanine.; GO: 0016714 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced pteridine as one donor, and incorporation of one atom of oxygen, 0055114 oxidation-reduction process; PDB: 1PHZ_A 2PHM_A 2V28_A 2V27_A 1PAH_A 1DMW_A 1TG2_A 1KW0_A 1MMT_A 1TDW_A ....
Probab=99.94 E-value=1.5e-28 Score=255.62 Aligned_cols=148 Identities=49% Similarity=0.760 Sum_probs=101.6
Q ss_pred HHHHHhhhcCccceeeeccCCCCCCCCCCchhhhhhcCCCCccCChhHHHHHH------HHhhh----cCCCChHHHHHH
Q psy14589 450 RDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSFAQFSQ------EIGLA----SLGAPDEYVERL 519 (655)
Q Consensus 450 ~~f~~~la~r~f~~t~~ir~~~~~~y~~epd~~He~~gh~p~l~~~~~a~~~~------~~Gl~----~l~~~~~~i~~l 519 (655)
|.+++.+|..-= +=-.....+||+|- |++=++ +.......+.. ..|+. ..|.++++||+|
T Consensus 40 R~~ia~~A~~~k----~g~pip~v~YT~eE---~~tW~~---v~~rl~~l~~~~AC~eyl~~~~~L~~~~G~~~d~IPqL 109 (332)
T PF00351_consen 40 RKEIADIAFNYK----HGDPIPRVEYTEEE---HATWRT---VYRRLMKLYPTHACREYLEGFPLLEKYCGYPEDRIPQL 109 (332)
T ss_dssp HHHHHHHHHH------TTSTTSGGG--HHH---HHHHHH---HHHHHHHHHHHHB-HHHHHHHHHHHHHHT-BTTB---H
T ss_pred HHHHHHHHHhcc----ccCCCCcccCCHHH---HHHHHH---HHHHHHHHHhhhhhHHHHHHHHHHHhccCCCccCCCCH
Confidence 667777775321 01122346788888 666332 33332222221 11333 347899999999
Q ss_pred HhhhhhhhhhhhccCCCCCCCCeEeecccccCCHHHHHhhhcccccccccccCCCCCCCCCCcchhhhhcCCcccccCch
Q psy14589 520 ATSNNFMIVPRLASLSPDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPS 599 (655)
Q Consensus 520 ~~l~w~tve~gl~~~~~~~tg~~~~~g~Gllss~~~~~~l~~~~f~~~~~ir~~~~~~y~~~pd~~hd~~ghvp~l~~p~ 599 (655)
.++| +.+.++|||++++++||||+..||.+||+|+||+|+|||++++++|+||||+|||++||||||+||+
T Consensus 110 ~dvs---------~~L~~~TGw~l~pV~Gll~~rdF~~~LA~RvFp~TqyIRh~~~p~YtpEPDi~HEl~GHvPmLadp~ 180 (332)
T PF00351_consen 110 EDVS---------EFLKERTGWQLRPVAGLLSARDFFAGLAFRVFPCTQYIRHHSEPDYTPEPDIFHELFGHVPMLADPS 180 (332)
T ss_dssp HHHH---------HHHHHHHS-EEEEESSEB-HHHHHHHHTTTEEEEESS---TTSTTS-SS--HHHHHHHTHHHHTSHH
T ss_pred HHHh---------HHHHhhcCeEEEEeCcccCHHHHHHHHhcCcCceEeeecCCCCCCCCCCCccHhHHhccchhhhcHH
Confidence 9999 6667789999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCce
Q psy14589 600 FAQFSQEIGLASLGAPY 616 (655)
Q Consensus 600 f~~~~~~~g~~~~~a~~ 616 (655)
||||+|++|+++++|+.
T Consensus 181 FA~f~q~~G~asl~asd 197 (332)
T PF00351_consen 181 FADFSQEIGLASLGASD 197 (332)
T ss_dssp HHHHHHHHHHHHTT--H
T ss_pred HHHHHHHHHHHHhhhhH
Confidence 99999999999999975
No 30
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=99.92 E-value=1.9e-24 Score=228.97 Aligned_cols=243 Identities=14% Similarity=0.059 Sum_probs=184.3
Q ss_pred hhhhHHhhhhcc---ccccccccchhHhhhhhhHHHhCCCCCCCCCCcccccccccccCCcE---Eeec---CCCCCCCC
Q psy14589 13 ETKTWGEVFRNL---TKLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFS---LRPV---AGLLSSRD 83 (655)
Q Consensus 13 e~~~W~~~~~~~---~~~l~~~aC~~~~~G~~~l~~~~~y~~~~iP~le~V~~~l~~~~g~~---~~~v---~~l~~~~s 83 (655)
++..|+.- +|+ ......++|.+|+.|.+++|++..+ ++.. ..+||+ +++. -.++++++
T Consensus 75 ~V~~~k~G-DrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~-----~gy~-------~~GGyaeyv~v~~~~~~~iP~~~d 141 (339)
T COG1064 75 GVTGLKVG-DRVGVGWLVISCGECEYCRSGNENLCPNQKI-----TGYT-------TDGGYAEYVVVPARYVVKIPEGLD 141 (339)
T ss_pred CCccCCCC-CEEEecCccCCCCCCccccCcccccCCCccc-----ccee-------ecCcceeEEEEchHHeEECCCCCC
Confidence 34445444 333 3577889999999999888887444 2221 123333 3432 34667889
Q ss_pred HHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCC
Q psy14589 84 FLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHT 163 (655)
Q Consensus 84 ~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~ 163 (655)
+++||++.|++.|+|.+|++ .++ ++|++|+|+|+ ||+|++++|+||++||+|++++++++|++.+++||||++||.+
T Consensus 142 ~~~aApllCaGiT~y~alk~-~~~-~pG~~V~I~G~-GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~lGAd~~i~~~ 218 (339)
T COG1064 142 LAEAAPLLCAGITTYRALKK-ANV-KPGKWVAVVGA-GGLGHMAVQYAKAMGAEVIAITRSEEKLELAKKLGADHVINSS 218 (339)
T ss_pred hhhhhhhhcCeeeEeeehhh-cCC-CCCCEEEEECC-cHHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHhCCcEEEEcC
Confidence 99999999999999999976 677 89999999999 7999999999999999999999999999999999999999977
Q ss_pred ccchhHHHHHHHhcCCCeeEEEeCCCcchHHHHHHHHHHhccccceEEEeeccchhhhhhhhhhhhhhhhhhhhhhhhee
Q psy14589 164 IRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHFFFFFFFFFFFFFFFFFFYFFFFFFFFFYFFYFL 243 (655)
Q Consensus 164 ~~~~~d~~~~i~~~~~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~ 243 (655)
+. +..+.+++. +|+++|+++..+ ++.+++.|+++|+++++|+
T Consensus 219 ~~---~~~~~~~~~---~d~ii~tv~~~~---~~~~l~~l~~~G~~v~vG~----------------------------- 260 (339)
T COG1064 219 DS---DALEAVKEI---ADAIIDTVGPAT---LEPSLKALRRGGTLVLVGL----------------------------- 260 (339)
T ss_pred Cc---hhhHHhHhh---CcEEEECCChhh---HHHHHHHHhcCCEEEEECC-----------------------------
Confidence 43 566666653 899999999447 9999999999999999993
Q ss_pred ecc-ccccccCCCCCCCCeEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecCCchHHHHHH
Q psy14589 244 LLS-QPLIQSCHSCPFSLFDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGGDLSSVIE 322 (655)
Q Consensus 244 ll~-~p~~~~~~~~~~~~ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg~~~v~~~l~ 322 (655)
.. .+...........+..++..++.. ...++.++|+..++++|+....|..|+. ++.++++
T Consensus 261 -~~~~~~~~~~~~~li~~~~~i~GS~~g-~~~d~~e~l~f~~~g~Ikp~i~e~~~l~----------------~in~A~~ 322 (339)
T COG1064 261 -PGGGPIPLLPAFLLILKEISIVGSLVG-TRADLEEALDFAAEGKIKPEILETIPLD----------------EINEAYE 322 (339)
T ss_pred -CCCcccCCCCHHHhhhcCeEEEEEecC-CHHHHHHHHHHHHhCCceeeEEeeECHH----------------HHHHHHH
Confidence 10 000000011123356788888888 6778999999999999996433677754 3456777
Q ss_pred HHHcc
Q psy14589 323 SLRSS 327 (655)
Q Consensus 323 ~L~~~ 327 (655)
+|++-
T Consensus 323 ~m~~g 327 (339)
T COG1064 323 RMEKG 327 (339)
T ss_pred HHHcC
Confidence 77653
No 31
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=99.90 E-value=5.8e-23 Score=219.68 Aligned_cols=199 Identities=21% Similarity=0.171 Sum_probs=161.4
Q ss_pred cCChhhhhhHHhhhhcc---ccccccccchhHhhhhhhHHHhCCC-C---CCCCCCcc---cccccccccCC--------
Q psy14589 8 DYTAEETKTWGEVFRNL---TKLYPTHACKEHNHVFPLLIQNCGY-A---EDNIPQLE---DISKFLKDSTG-------- 69 (655)
Q Consensus 8 ~y~~~e~~~W~~~~~~~---~~~l~~~aC~~~~~G~~~l~~~~~y-~---~~~iP~le---~V~~~l~~~~g-------- 69 (655)
.++.+|+..+.++..++ .+++.+......|-. |++.+.+.. + .+.+|+.+ .|.+....+++
T Consensus 8 ~~g~~~~l~~~e~~~P~p~~geVlVrV~a~gvN~~-D~~~r~G~~~~~~~~P~i~G~d~aG~V~avG~~V~~~~~GdrV~ 86 (326)
T COG0604 8 EFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPI-DVLVRQGLAPPVRPLPFIPGSEAAGVVVAVGSGVTGFKVGDRVA 86 (326)
T ss_pred ccCCCceeEEEecCCCCCCCCeEEEEEEEeecChH-HHHhccCCCCCCCCCCCcccceeEEEEEEeCCCCCCcCCCCEEE
Confidence 34555556676666543 678888899998888 888888763 2 46777766 33333333322
Q ss_pred ----------cE---Eeec---CCCCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHH
Q psy14589 70 ----------FS---LRPV---AGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKA 133 (655)
Q Consensus 70 ----------~~---~~~v---~~l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~ 133 (655)
|+ ++|. -.+++++|+++||+++++++|||+++.+...+ ++|++|||+||+||||++++|+||+
T Consensus 87 ~~~~~~~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~TA~~~l~~~~~l-~~g~~VLV~gaaGgVG~~aiQlAk~ 165 (326)
T COG0604 87 ALGGVGRDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGL-KPGETVLVHGAAGGVGSAAIQLAKA 165 (326)
T ss_pred EccCCCCCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCC-CCCCEEEEecCCchHHHHHHHHHHH
Confidence 22 1221 12457899999999999999999999998888 8999999999999999999999999
Q ss_pred cCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCC--CeeEEEeCCCcchHHHHHHHHHHhccccceEE
Q psy14589 134 YGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGS--ELDADHPGFTDPVYRARRKYFADLAFNYKHFF 211 (655)
Q Consensus 134 ~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~--gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~ 211 (655)
+|+++++++++++|.+.++++|||++|||++. ++.+.+++.++ ++|+|+|++|+++ +..++++|+++|++++
T Consensus 166 ~G~~~v~~~~s~~k~~~~~~lGAd~vi~y~~~---~~~~~v~~~t~g~gvDvv~D~vG~~~---~~~~l~~l~~~G~lv~ 239 (326)
T COG0604 166 LGATVVAVVSSSEKLELLKELGADHVINYREE---DFVEQVRELTGGKGVDVVLDTVGGDT---FAASLAALAPGGRLVS 239 (326)
T ss_pred cCCcEEEEecCHHHHHHHHhcCCCEEEcCCcc---cHHHHHHHHcCCCCceEEEECCCHHH---HHHHHHHhccCCEEEE
Confidence 99888888888888889999999999999885 69999998875 7999999999999 8999999999999999
Q ss_pred Eee
Q psy14589 212 FFF 214 (655)
Q Consensus 212 v~~ 214 (655)
+|.
T Consensus 240 ig~ 242 (326)
T COG0604 240 IGA 242 (326)
T ss_pred Eec
Confidence 983
No 32
>KOG3820|consensus
Probab=99.89 E-value=3.8e-24 Score=223.48 Aligned_cols=151 Identities=56% Similarity=0.864 Sum_probs=126.6
Q ss_pred hHHHHHhhhcCccceeeeccCCCC---CCCCCCc-----hhhhhhcCCCCccCChhHHHHHHHHhhhcCCCChHHHHHHH
Q psy14589 449 SRDFLAGLAFRVFHSTQYIRHPSK---PLYTPEP-----DVCHELLGHVPLFADPSFAQFSQEIGLASLGAPDEYVERLA 520 (655)
Q Consensus 449 ~~~f~~~la~r~f~~t~~ir~~~~---~~y~~ep-----d~~He~~gh~p~l~~~~~a~~~~~~Gl~~l~~~~~~i~~l~ 520 (655)
-|.||+.+|+.. ||.+. .+||+|- -++-++-+=.|--+=++|.+....+- .-.|..++.||.|.
T Consensus 163 RRk~fadiA~ny-------KhGdpIP~veYT~eEikTWg~Vf~~L~~Ly~~HAC~ey~~~f~lLe-~~cg~~ednIPQLe 234 (461)
T KOG3820|consen 163 RRKFFADIAFNY-------KHGDPIPRVEYTEEEIKTWGTVFRTLTDLYPTHACAEYLDNFPLLE-KYCGYREDNIPQLE 234 (461)
T ss_pred HHHHHHHHHHhc-------ccCCCCCccccCHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHH-HhcCcCCCCcchHH
Confidence 378999999863 45544 4788876 24444444466666666666655443 45678999999999
Q ss_pred hhhhhhhhhhhccCCCCCCCCeEeecccccCCHHHHHhhhcccccccccccCCCCCCCCCCcchhhhhcCCcccccCchH
Q psy14589 521 TSNNFMIVPRLASLSPDSTGFSLRPVAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDVCHELLGHVPLFADPSF 600 (655)
Q Consensus 521 ~l~w~tve~gl~~~~~~~tg~~~~~g~Gllss~~~~~~l~~~~f~~~~~ir~~~~~~y~~~pd~~hd~~ghvp~l~~p~f 600 (655)
+++ +=+.+.||.++|++|||||+.+|+.-||.|+|.+|+||||...+-||||||+|||++||||||+||+|
T Consensus 235 DVs---------~FLk~~TGF~lRPvAGlLSaRDFLagLAFRVFhcTQYiRH~s~P~yTPEPD~cHELLGHvPLfADp~F 305 (461)
T KOG3820|consen 235 DVS---------KFLKKKTGFRLRPVAGLLSARDFLAGLAFRVFHCTQYIRHHSSPFYTPEPDTCHELLGHVPLFADPSF 305 (461)
T ss_pred HHH---------HHHHhccCceeecccccCcHHHHHhhhhhhheeeeeeeecCCCCCCCCCCchHHHHhccchhccChhH
Confidence 999 44467899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcccCCce
Q psy14589 601 AQFSQEIGLASLGAPY 616 (655)
Q Consensus 601 ~~~~~~~g~~~~~a~~ 616 (655)
|||+|++|.++||||+
T Consensus 306 AQFSQEIGLASLGAsD 321 (461)
T KOG3820|consen 306 AQFSQEIGLASLGASD 321 (461)
T ss_pred HHHhHHhhhhhcCCCH
Confidence 9999999999999986
No 33
>KOG1197|consensus
Probab=99.86 E-value=5.7e-21 Score=191.32 Aligned_cols=200 Identities=16% Similarity=0.078 Sum_probs=158.6
Q ss_pred cCChhhhhhHHhhhh---ccccccccccchhHhhhhhhHHHhCCCC---CCCCCCcc---cccccccccCCcEE------
Q psy14589 8 DYTAEETKTWGEVFR---NLTKLYPTHACKEHNHVFPLLIQNCGYA---EDNIPQLE---DISKFLKDSTGFSL------ 72 (655)
Q Consensus 8 ~y~~~e~~~W~~~~~---~~~~~l~~~aC~~~~~G~~~l~~~~~y~---~~~iP~le---~V~~~l~~~~g~~~------ 72 (655)
++++.|+.-|..... ...+...+-..++.|-. |.+-|.+-|. .+-+|++| +|-+++..++++.+
T Consensus 16 e~Ggydvlk~ed~pv~~papgel~iknka~GlNfi-d~y~RkGlY~~~plPytpGmEaaGvVvAvG~gvtdrkvGDrVay 94 (336)
T KOG1197|consen 16 EFGGYDVLKLEDRPVPPPAPGELTIKNKACGLNFI-DLYFRKGLYDPAPLPYTPGMEAAGVVVAVGEGVTDRKVGDRVAY 94 (336)
T ss_pred ccCCcceEEEeeecCCCCCCCceEEeehhcCccHH-HHHHhccccCCCCCCcCCCcccceEEEEecCCccccccccEEEE
Confidence 455666666654433 11222333333334433 6778888883 45667777 44444555544432
Q ss_pred ------------ee---cCCCCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCe
Q psy14589 73 ------------RP---VAGLLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLT 137 (655)
Q Consensus 73 ------------~~---v~~l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~ 137 (655)
+| +..++..+++.+|||+...++|||.-+.+...+ ++|++|||+.|+||||++++|++|+.|++
T Consensus 95 l~~~g~yaee~~vP~~kv~~vpe~i~~k~aaa~llq~lTAy~ll~e~y~v-kpGhtVlvhaAAGGVGlll~Ql~ra~~a~ 173 (336)
T KOG1197|consen 95 LNPFGAYAEEVTVPSVKVFKVPEAITLKEAAALLLQGLTAYMLLFEAYNV-KPGHTVLVHAAAGGVGLLLCQLLRAVGAH 173 (336)
T ss_pred eccchhhheeccccceeeccCCcccCHHHHHHHHHHHHHHHHHHHHhcCC-CCCCEEEEEeccccHHHHHHHHHHhcCcE
Confidence 11 233456788999999999999999999999999 99999999999999999999999999999
Q ss_pred EEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCC--CeeEEEeCCCcchHHHHHHHHHHhccccceEEEeec
Q psy14589 138 VFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGS--ELDADHPGFTDPVYRARRKYFADLAFNYKHFFFFFF 215 (655)
Q Consensus 138 Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~--gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~~~ 215 (655)
+|+++++.+|++.+++.||+++||++.+ |+.+++.+.++ |+|+++|.+|.++ +..++.+||++|++|++|++
T Consensus 174 tI~~asTaeK~~~akenG~~h~I~y~~e---D~v~~V~kiTngKGVd~vyDsvG~dt---~~~sl~~Lk~~G~mVSfG~a 247 (336)
T KOG1197|consen 174 TIATASTAEKHEIAKENGAEHPIDYSTE---DYVDEVKKITNGKGVDAVYDSVGKDT---FAKSLAALKPMGKMVSFGNA 247 (336)
T ss_pred EEEEeccHHHHHHHHhcCCcceeeccch---hHHHHHHhccCCCCceeeeccccchh---hHHHHHHhccCceEEEeccc
Confidence 9999999999999999999999999985 89999999873 9999999999999 99999999999999999853
No 34
>KOG0023|consensus
Probab=99.83 E-value=6.8e-20 Score=189.52 Aligned_cols=250 Identities=13% Similarity=0.054 Sum_probs=175.2
Q ss_pred hhhHHhhhhccccccc---cccchhHhhhhhhHHHhCCCCCCCCCCcccccccccccCCcE---E---eecCCCCCCCCH
Q psy14589 14 TKTWGEVFRNLTKLYP---THACKEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFS---L---RPVAGLLSSRDF 84 (655)
Q Consensus 14 ~~~W~~~~~~~~~~l~---~~aC~~~~~G~~~l~~~~~y~~~~iP~le~V~~~l~~~~g~~---~---~~v~~l~~~~s~ 84 (655)
+..|+.- ++.+..+. ...|++|+.|.+.+|.+..+.-..+. .++ -....||+ + +-+-.++.+++.
T Consensus 84 V~~~kiG-D~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~-~DG----t~~~ggf~~~~~v~~~~a~kIP~~~pl 157 (360)
T KOG0023|consen 84 VTGFKIG-DRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVY-HDG----TITQGGFQEYAVVDEVFAIKIPENLPL 157 (360)
T ss_pred ccccccc-CeeeeeEEeccccCccccccCCcccCCceeEeccccc-cCC----CCccCccceeEEEeeeeEEECCCCCCh
Confidence 5556544 45544444 45678888887766663222111110 000 01123344 1 123346778899
Q ss_pred HhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHH-HHHHHhCCCcEEEeCC
Q psy14589 85 LAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVG-VAKAYGLGADYVVDHT 163 (655)
Q Consensus 85 ~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k-~~~a~~LGAd~vId~~ 163 (655)
+.||++.|++.|+|.+|++. ++ .+|++|.|.|+ ||+|++++|+||+||.+|++++++.+| .+.++.||||..|+..
T Consensus 158 ~~aAPlLCaGITvYspLk~~-g~-~pG~~vgI~Gl-GGLGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~~~ 234 (360)
T KOG0023|consen 158 ASAAPLLCAGITVYSPLKRS-GL-GPGKWVGIVGL-GGLGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVDST 234 (360)
T ss_pred hhccchhhcceEEeehhHHc-CC-CCCcEEEEecC-cccchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEEec
Confidence 99999999999999999765 45 69999999999 679999999999999999999998844 4455679999999987
Q ss_pred ccchhHHHHHHHhcCC-CeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEeeccchhhhhhhhhhhhhhhhhhhhhhhh
Q psy14589 164 IRELDRFANQILSYGS-ELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFFFFFFFFFFFFFFFFYFFFFFFFFFYFFY 241 (655)
Q Consensus 164 ~~~~~d~~~~i~~~~~-gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (655)
+. .++.+.+.+.++ ++|-|... +. . ++.+++.+|.+|++|++|.
T Consensus 235 ~d--~d~~~~~~~~~dg~~~~v~~~--a~~~---~~~~~~~lk~~Gt~V~vg~--------------------------- 280 (360)
T KOG0023|consen 235 ED--PDIMKAIMKTTDGGIDTVSNL--AEHA---LEPLLGLLKVNGTLVLVGL--------------------------- 280 (360)
T ss_pred CC--HHHHHHHHHhhcCcceeeeec--cccc---hHHHHHHhhcCCEEEEEeC---------------------------
Confidence 43 267777776653 45555443 33 5 8999999999999999992
Q ss_pred eeeccccccccCCCCCCCCeEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCC----------CcceEEEEEe
Q psy14589 242 FLLLSQPLIQSCHSCPFSLFDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRI----------ENNYEFMVEC 311 (655)
Q Consensus 242 F~ll~~p~~~~~~~~~~~~ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~----------~~~Y~FfVd~ 311 (655)
... +......+..-++.+|..+... ......++|+.+++++|+ ..||.-|...- .-.|+|.||+
T Consensus 281 ---p~~-~~~~~~~~lil~~~~I~GS~vG-~~ket~E~Ldf~a~~~ik-~~IE~v~~~~v~~a~erm~kgdV~yRfVvD~ 354 (360)
T KOG0023|consen 281 ---PEK-PLKLDTFPLILGRKSIKGSIVG-SRKETQEALDFVARGLIK-SPIELVKLSEVNEAYERMEKGDVRYRFVVDV 354 (360)
T ss_pred ---cCC-cccccchhhhcccEEEEeeccc-cHHHHHHHHHHHHcCCCc-CceEEEehhHHHHHHHHHHhcCeeEEEEEEc
Confidence 122 1112234445568888888887 677899999999999999 47887775432 2368888887
Q ss_pred c
Q psy14589 312 A 312 (655)
Q Consensus 312 e 312 (655)
.
T Consensus 355 s 355 (360)
T KOG0023|consen 355 S 355 (360)
T ss_pred c
Confidence 5
No 35
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=99.78 E-value=4.2e-18 Score=182.65 Aligned_cols=171 Identities=12% Similarity=0.048 Sum_probs=125.9
Q ss_pred cccccccchhHhhhhhhHHHhCCCCCCCC--CCcccccccccccCCcEEeec---CCCCCCCCHHhHhhhhhHHHHHHHH
Q psy14589 26 KLYPTHACKEHNHVFPLLIQNCGYAEDNI--PQLEDISKFLKDSTGFSLRPV---AGLLSSRDFLAGLAFRVFHSTQYIR 100 (655)
Q Consensus 26 ~~l~~~aC~~~~~G~~~l~~~~~y~~~~i--P~le~V~~~l~~~~g~~~~~v---~~l~~~~s~~eAAal~~a~~TA~~a 100 (655)
+....++|.+|..|..++|.+..+-.... ++.. .....+.+++. ..++++++++ ++++.++++|||++
T Consensus 89 ~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~~~~~~------G~~aey~~v~~~~~~~~P~~l~~~-~aa~~~~~~~a~~a 161 (343)
T PRK09880 89 PSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVD------GGFTRYKVVDTAQCIPYPEKADEK-VMAFAEPLAVAIHA 161 (343)
T ss_pred CCCCCcCChhhcCCChhhCCCcceeecccccCCCC------CceeeeEEechHHeEECCCCCCHH-HHHhhcHHHHHHHH
Confidence 55667889999999888877644310000 0000 00111222322 1244566665 45677888999999
Q ss_pred hhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCC
Q psy14589 101 HPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGS 179 (655)
Q Consensus 101 L~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~ 179 (655)
+.+... .+|++|+|+|+ |++|++++|+||++|+ +|++++++++|++.++++||+.++|+++. ++.+ +.+..+
T Consensus 162 l~~~~~--~~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~---~~~~-~~~~~g 234 (343)
T PRK09880 162 AHQAGD--LQGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVNPQND---DLDH-YKAEKG 234 (343)
T ss_pred HHhcCC--CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEecCCcc---cHHH-HhccCC
Confidence 876544 48999999997 9999999999999999 69999999999999999999999998764 3433 322234
Q ss_pred CeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589 180 ELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 180 gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
++|+|+|++|++ . ++.++++++++|+++.+|
T Consensus 235 ~~D~vid~~G~~~~---~~~~~~~l~~~G~iv~~G 266 (343)
T PRK09880 235 YFDVSFEVSGHPSS---INTCLEVTRAKGVMVQVG 266 (343)
T ss_pred CCCEEEECCCCHHH---HHHHHHHhhcCCEEEEEc
Confidence 699999999986 6 889999999999999998
No 36
>KOG0024|consensus
Probab=99.78 E-value=2.9e-18 Score=177.87 Aligned_cols=248 Identities=14% Similarity=0.033 Sum_probs=177.0
Q ss_pred ccccccccchhHhhhhhhHHHhCCCCCC-CCCCcccccccccccCCcEEeec---CCCCCCCCHHhHhhhhhHHHHHHHH
Q psy14589 25 TKLYPTHACKEHNHVFPLLIQNCGYAED-NIPQLEDISKFLKDSTGFSLRPV---AGLLSSRDFLAGLAFRVFHSTQYIR 100 (655)
Q Consensus 25 ~~~l~~~aC~~~~~G~~~l~~~~~y~~~-~iP~le~V~~~l~~~~g~~~~~v---~~l~~~~s~~eAAal~~a~~TA~~a 100 (655)
-|-++...|+.|.+|+.+||.+++++.. -++|- + ..+.+.+. ..+++++|++ .+|+.++++++|||
T Consensus 92 Epg~~c~~cd~CK~GrYNlCp~m~f~atpp~~G~------l---a~y~~~~~dfc~KLPd~vs~e-eGAl~ePLsV~~HA 161 (354)
T KOG0024|consen 92 EPGLPCRDCDFCKEGRYNLCPHMVFCATPPVDGT------L---AEYYVHPADFCYKLPDNVSFE-EGALIEPLSVGVHA 161 (354)
T ss_pred cCCCccccchhhhCcccccCCccccccCCCcCCc------e---EEEEEechHheeeCCCCCchh-hcccccchhhhhhh
Confidence 4667888899999999999999998632 22221 1 11222332 3466777766 56788899999999
Q ss_pred hhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCCcEEEeCCccc-hhHHHHHHHhcC
Q psy14589 101 HPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGADYVVDHTIRE-LDRFANQILSYG 178 (655)
Q Consensus 101 L~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGAd~vId~~~~~-~~d~~~~i~~~~ 178 (655)
.+ ++++ +.|.+|||.|| |+||+.+...||++|| +|++++..+.|++.|+++||+.+.+..... .+++.+.+.+.-
T Consensus 162 cr-~~~v-k~Gs~vLV~GA-GPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~~~~~~~~~~~~~~~v~~~~ 238 (354)
T KOG0024|consen 162 CR-RAGV-KKGSKVLVLGA-GPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTDPSSHKSSPQELAELVEKAL 238 (354)
T ss_pred hh-hcCc-ccCCeEEEECC-cHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEeeccccccHHHHHHHHHhhc
Confidence 85 6778 99999999999 9999999999999999 899999999999999999999988766532 234555555543
Q ss_pred C--CeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEeeccchhhhhhhhhhhhhhhhhhhhhhhheeeccccccccCCC
Q psy14589 179 S--ELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFFFFFFFFFFFFFFFFYFFFFFFFFFYFFYFLLLSQPLIQSCHS 255 (655)
Q Consensus 179 ~--gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~ll~~p~~~~~~~ 255 (655)
+ .+|++|||+|.. + ++.++.+++.+|++++++. ..+..+....
T Consensus 239 g~~~~d~~~dCsG~~~~---~~aai~a~r~gGt~vlvg~-------------------------------g~~~~~fpi~ 284 (354)
T KOG0024|consen 239 GKKQPDVTFDCSGAEVT---IRAAIKATRSGGTVVLVGM-------------------------------GAEEIQFPII 284 (354)
T ss_pred cccCCCeEEEccCchHH---HHHHHHHhccCCEEEEecc-------------------------------CCCccccChh
Confidence 2 599999999998 6 8999999999999999872 2221111111
Q ss_pred CCCCCeEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecCCchHHHHHHHHHccCC-cEEEe
Q psy14589 256 CPFSLFDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGGDLSSVIESLRSSCS-YINII 334 (655)
Q Consensus 256 ~~~~~ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg~~~v~~~l~~L~~~~~-~v~iL 334 (655)
........+..+.+- .-+....+++++++++||+.++-+ .. |. .+...++.+.+..... .+|++
T Consensus 285 ~v~~kE~~~~g~fry-~~~~y~~ai~li~sGki~~k~lIT-----~r--~~-------~~~~~eAf~~~~~~~~~~iKv~ 349 (354)
T KOG0024|consen 285 DVALKEVDLRGSFRY-CNGDYPTAIELVSSGKIDVKPLIT-----HR--YK-------FDDADEAFETLQHGEEGVIKVI 349 (354)
T ss_pred hhhhheeeeeeeeee-ccccHHHHHHHHHcCCcCchhhee-----cc--cc-------cchHHHHHHHHHhCcCCceEEE
Confidence 122234555544443 335788999999999999975433 22 22 1345567777765543 45544
No 37
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=99.78 E-value=3.5e-18 Score=175.75 Aligned_cols=154 Identities=16% Similarity=0.036 Sum_probs=128.8
Q ss_pred CCCCCcccccccccccCCcEEee---cCCCC---C--CCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCch
Q psy14589 52 DNIPQLEDISKFLKDSTGFSLRP---VAGLL---S--SRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGN 123 (655)
Q Consensus 52 ~~iP~le~V~~~l~~~~g~~~~~---v~~l~---~--~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgV 123 (655)
++.|+++..+.+ ..+.||+-.. ..++. + .-.......+.+++.|||.+|.+.+.. ++||+|+|.||+|+|
T Consensus 86 S~~~~f~~GD~V-~~~~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igqp-k~GetvvVSaAaGaV 163 (340)
T COG2130 86 SNHPGFQPGDIV-VGVSGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQP-KAGETVVVSAAAGAV 163 (340)
T ss_pred cCCCCCCCCCEE-EecccceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHHhcCC-CCCCEEEEEeccccc
Confidence 455555543322 3456888422 11221 1 112345678899999999999999999 999999999999999
Q ss_pred HHHHHHHHHHcCCeEEEEecChHHHHHHHh-CCCcEEEeCCccchhHHHHHHHhcCC-CeeEEEeCCCcchHHHHHHHHH
Q psy14589 124 GLAAIQVGKAYGLTVFASVGCPVGVAKAYG-LGADYVVDHTIRELDRFANQILSYGS-ELDADHPGFTDPVYRARRKYFA 201 (655)
Q Consensus 124 G~~avQlAk~~Ga~Viat~~s~~k~~~a~~-LGAd~vId~~~~~~~d~~~~i~~~~~-gvDvV~D~vG~~~~~~l~~~l~ 201 (655)
|+.+.|+||.+|++|++++++++|.+++.+ +|.|.+|||+++ ++.+.+.+... |+|+.||+||++. ++.++.
T Consensus 164 GsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD~~idyk~~---d~~~~L~~a~P~GIDvyfeNVGg~v---~DAv~~ 237 (340)
T COG2130 164 GSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFDAGIDYKAE---DFAQALKEACPKGIDVYFENVGGEV---LDAVLP 237 (340)
T ss_pred chHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCceeeecCcc---cHHHHHHHHCCCCeEEEEEcCCchH---HHHHHH
Confidence 999999999999999999999999999987 999999999986 78888888754 9999999999999 999999
Q ss_pred HhccccceEEEe
Q psy14589 202 DLAFNYKHFFFF 213 (655)
Q Consensus 202 ~l~~gGrlv~v~ 213 (655)
.|+..||+++.|
T Consensus 238 ~ln~~aRi~~CG 249 (340)
T COG2130 238 LLNLFARIPVCG 249 (340)
T ss_pred hhccccceeeee
Confidence 999999999998
No 38
>KOG1198|consensus
Probab=99.77 E-value=4e-18 Score=183.50 Aligned_cols=129 Identities=19% Similarity=0.136 Sum_probs=115.7
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcCC------CCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSKP------LYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA 151 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~~------~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a 151 (655)
.+..+++.+||++|+++.|||.++...+ .. ++|++|||+||+||||++++|+||+.|+.++++++++++.+++
T Consensus 120 ~P~~l~~~~aa~~p~~~~tA~~al~~~~~~~~~~~~-~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~ 198 (347)
T KOG1198|consen 120 IPESLSFEEAAALPLAALTALSALFQLAPGKRSKKL-SKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELV 198 (347)
T ss_pred CCCccChhhhhcCchHHHHHHHHHHhcccccccccc-CCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHH
Confidence 4467899999999999999999999988 88 8999999999999999999999999997666677889999999
Q ss_pred HhCCCcEEEeCCccchhHHHHHHHhcC-CCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589 152 YGLGADYVVDHTIRELDRFANQILSYG-SELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 152 ~~LGAd~vId~~~~~~~d~~~~i~~~~-~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
+++|||+++||++. ++.+.+++.+ +++|+|+||+|+.+ ...++.+++.+|+...++
T Consensus 199 k~lGAd~vvdy~~~---~~~e~~kk~~~~~~DvVlD~vg~~~---~~~~~~~l~~~g~~~~i~ 255 (347)
T KOG1198|consen 199 KKLGADEVVDYKDE---NVVELIKKYTGKGVDVVLDCVGGST---LTKSLSCLLKGGGGAYIG 255 (347)
T ss_pred HHcCCcEeecCCCH---HHHHHHHhhcCCCccEEEECCCCCc---cccchhhhccCCceEEEE
Confidence 99999999999985 7888888864 48999999999987 788889999888876665
No 39
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=99.77 E-value=1.5e-17 Score=179.70 Aligned_cols=253 Identities=16% Similarity=0.082 Sum_probs=170.5
Q ss_pred cccccccccchhHhhhhhhHHHhCCCCC--CCCCCcccccccccccCCcEEeecCC---C-CCCCCHHhHhhhhhHHHHH
Q psy14589 24 LTKLYPTHACKEHNHVFPLLIQNCGYAE--DNIPQLEDISKFLKDSTGFSLRPVAG---L-LSSRDFLAGLAFRVFHSTQ 97 (655)
Q Consensus 24 ~~~~l~~~aC~~~~~G~~~l~~~~~y~~--~~iP~le~V~~~l~~~~g~~~~~v~~---l-~~~~s~~eAAal~~a~~TA 97 (655)
..+.++.+.|.+|+.|..++|.+.++-. ...++..+ ....|..+|... . ++++ ..++|++.+++.|+
T Consensus 84 v~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G------~~aEyv~vp~~~~~~~~pd~~-~~~~aal~epla~~ 156 (350)
T COG1063 84 VEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDG------GFAEYVRVPADFNLAKLPDGI-DEEAAALTEPLATA 156 (350)
T ss_pred ECCCcCCCCChhHhCcCcccCCCccccccccccCCCCC------ceEEEEEeccccCeecCCCCC-ChhhhhhcChhhhh
Confidence 3688999999999999988888554311 01111111 111122333211 1 2233 67899999999999
Q ss_pred HHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHh-CCCcEEEeCCccchhHHHHHHH
Q psy14589 98 YIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYG-LGADYVVDHTIRELDRFANQIL 175 (655)
Q Consensus 98 ~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~-LGAd~vId~~~~~~~d~~~~i~ 175 (655)
+++....... +++++|+|.|+ |+||++++|+||.+|+ +||+++.+++|++.|++ .|++.+++.... +....+.
T Consensus 157 ~~~~a~~~~~-~~~~~V~V~Ga-GpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~~---~~~~~~~ 231 (350)
T COG1063 157 YHGHAERAAV-RPGGTVVVVGA-GPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSED---DAGAEIL 231 (350)
T ss_pred hhhhhhccCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCccc---cHHHHHH
Confidence 7774444444 46669999999 9999999999999998 88999999999999999 677777665542 4555666
Q ss_pred hcCC--CeeEEEeCCCcchHHHHHHHHHHhccccceEEEeeccchhhhhhhhhhhhhhhhhhhhhhhheeeccccccccC
Q psy14589 176 SYGS--ELDADHPGFTDPVYRARRKYFADLAFNYKHFFFFFFFFFFFFFFFFFFYFFFFFFFFFYFFYFLLLSQPLIQSC 253 (655)
Q Consensus 176 ~~~~--gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~ll~~p~~~~~ 253 (655)
+.++ ++|+++||+|... .+++++++++++|+++++|.. ........
T Consensus 232 ~~t~g~g~D~vie~~G~~~--~~~~ai~~~r~gG~v~~vGv~------------------------------~~~~~~~~ 279 (350)
T COG1063 232 ELTGGRGADVVIEAVGSPP--ALDQALEALRPGGTVVVVGVY------------------------------GGEDIPLP 279 (350)
T ss_pred HHhCCCCCCEEEECCCCHH--HHHHHHHHhcCCCEEEEEecc------------------------------CCccCccC
Confidence 6654 6999999999762 389999999999999999831 01000000
Q ss_pred CCCCCCCeEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecCCchHHHHHHHHHccCC-cEE
Q psy14589 254 HSCPFSLFDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGGDLSSVIESLRSSCS-YIN 332 (655)
Q Consensus 254 ~~~~~~~ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg~~~v~~~l~~L~~~~~-~v~ 332 (655)
......+..++..+..+.......+++++++++++++..+-++... .++..++++.+...-. .+|
T Consensus 280 ~~~~~~kel~l~gs~~~~~~~~~~~~~~ll~~g~i~~~~lit~~~~--------------~~~~~~a~~~~~~~~~~~~K 345 (350)
T COG1063 280 AGLVVSKELTLRGSLRPSGREDFERALDLLASGKIDPEKLITHRLP--------------LDDAAEAYELFADRKEEAIK 345 (350)
T ss_pred HHHHHhcccEEEeccCCCCcccHHHHHHHHHcCCCChhHceEeecc--------------HHHHHHHHHHHHhcCCCeEE
Confidence 0011123566666644214457888999999999999877554433 1355677777775433 455
Q ss_pred Ee
Q psy14589 333 II 334 (655)
Q Consensus 333 iL 334 (655)
++
T Consensus 346 v~ 347 (350)
T COG1063 346 VV 347 (350)
T ss_pred EE
Confidence 54
No 40
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=99.77 E-value=7.3e-18 Score=182.78 Aligned_cols=178 Identities=13% Similarity=-0.022 Sum_probs=135.9
Q ss_pred cccccchhHhhhhhhHHHhCCCCCC---CCCCc-----cccccc-ccccCCcE---EeecC---CCCCCCCHHhHhhhhh
Q psy14589 28 YPTHACKEHNHVFPLLIQNCGYAED---NIPQL-----EDISKF-LKDSTGFS---LRPVA---GLLSSRDFLAGLAFRV 92 (655)
Q Consensus 28 l~~~aC~~~~~G~~~l~~~~~y~~~---~iP~l-----e~V~~~-l~~~~g~~---~~~v~---~l~~~~s~~eAAal~~ 92 (655)
...+.|..|..|..++|.+...... ..++- ...... .....+|+ +++.. .++++++++++|++++
T Consensus 95 ~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~~~~lP~~l~~~~aa~~~~ 174 (371)
T cd08281 95 PSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVVKIDKDVPLEIAALFGC 174 (371)
T ss_pred CCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeEEecccceEECCCCCChHHhhhhcc
Confidence 4577899999999888876532100 00000 000000 00012333 33332 2456788999999999
Q ss_pred HHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCCcEEEeCCccchhHHH
Q psy14589 93 FHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFA 171 (655)
Q Consensus 93 a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~ 171 (655)
+.+|||+++.+...+ ++|++|+|.|+ |++|++++|+||++|+ +|++++++++|++.++++||++++++.+. ++.
T Consensus 175 ~~~ta~~~~~~~~~i-~~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~~---~~~ 249 (371)
T cd08281 175 AVLTGVGAVVNTAGV-RPGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGATATVNAGDP---NAV 249 (371)
T ss_pred hHHHHHHHHHhccCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcCCceEeCCCch---hHH
Confidence 999999998777888 89999999996 9999999999999999 69999999999999999999999998764 567
Q ss_pred HHHHhcCC-CeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589 172 NQILSYGS-ELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 172 ~~i~~~~~-gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
+.+++.++ ++|+|+|++|+. . ++.++++++++|+++.+|
T Consensus 250 ~~i~~~~~~g~d~vid~~G~~~~---~~~~~~~l~~~G~iv~~G 290 (371)
T cd08281 250 EQVRELTGGGVDYAFEMAGSVPA---LETAYEITRRGGTTVTAG 290 (371)
T ss_pred HHHHHHhCCCCCEEEECCCChHH---HHHHHHHHhcCCEEEEEc
Confidence 77776654 799999999976 6 889999999999999988
No 41
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=99.76 E-value=1.7e-17 Score=180.74 Aligned_cols=237 Identities=16% Similarity=0.067 Sum_probs=161.5
Q ss_pred ccccchhHhhhhhhHHHhCCCCCCC--CCCcccccccccccCCcEEeec---CCCCCCCCHHhHhhhhhHHHHHHHHhhc
Q psy14589 29 PTHACKEHNHVFPLLIQNCGYAEDN--IPQLEDISKFLKDSTGFSLRPV---AGLLSSRDFLAGLAFRVFHSTQYIRHPS 103 (655)
Q Consensus 29 ~~~aC~~~~~G~~~l~~~~~y~~~~--iP~le~V~~~l~~~~g~~~~~v---~~l~~~~s~~eAAal~~a~~TA~~aL~~ 103 (655)
..+.|.+|+.|..++|.+..+.... ..+.. .-.....+.+++. ..++++++++++|++++++.|+|+++..
T Consensus 96 ~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~----~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~ 171 (375)
T PLN02178 96 SCQSCESCNQDLENYCPKVVFTYNSRSSDGTR----NQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKY 171 (375)
T ss_pred CCCCChhHhCcchhcCCCccccccccccCCCc----CCCccccEEEEchHHeEECCCCCCHHHcchhhccchHHHHHHHH
Confidence 3788999999998888775532100 00110 0011112223332 2356788999999999999999999865
Q ss_pred CCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHH-HHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCee
Q psy14589 104 KPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVG-VAKAYGLGADYVVDHTIRELDRFANQILSYGSELD 182 (655)
Q Consensus 104 ~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k-~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvD 182 (655)
.....++|++|+|.|+ |++|++++|+||++|++|++++.++++ .+.++++|++++||+.+. +.+.+.++++|
T Consensus 172 ~~~~~~~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~~------~~v~~~~~~~D 244 (375)
T PLN02178 172 YGMTKESGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDS------QKMKEAVGTMD 244 (375)
T ss_pred hCCCCCCCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhCCCcEEEcCcCH------HHHHHhhCCCc
Confidence 5432158999999987 999999999999999999998877554 677889999999987642 23333334799
Q ss_pred EEEeCCCcc-hHHHHHHHHHHhccccceEEEeeccchhhhhhhhhhhhhhhhhhhhhhhheeeccccccccCCCCCCCCe
Q psy14589 183 ADHPGFTDP-VYRARRKYFADLAFNYKHFFFFFFFFFFFFFFFFFFYFFFFFFFFFYFFYFLLLSQPLIQSCHSCPFSLF 261 (655)
Q Consensus 183 vV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~ll~~p~~~~~~~~~~~~k 261 (655)
+|+|++|++ . ++.++++++++|+++.+|.. ..+. .........+.
T Consensus 245 ~vid~~G~~~~---~~~~~~~l~~~G~iv~vG~~------------------------------~~~~-~~~~~~~~~~~ 290 (375)
T PLN02178 245 FIIDTVSAEHA---LLPLFSLLKVSGKLVALGLP------------------------------EKPL-DLPIFPLVLGR 290 (375)
T ss_pred EEEECCCcHHH---HHHHHHhhcCCCEEEEEccC------------------------------CCCC-ccCHHHHHhCC
Confidence 999999987 6 89999999999999999820 0000 00000011123
Q ss_pred EEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecCCchHHHHHHHHHccC
Q psy14589 262 DFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGGDLSSVIESLRSSC 328 (655)
Q Consensus 262 tsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg~~~v~~~l~~L~~~~ 328 (655)
.++..+... ....+.++++.+++++|++. |++.|+ +++.++++.+++..
T Consensus 291 ~~i~g~~~~-~~~~~~~~~~l~~~g~i~~~-i~~~~l----------------~~~~~A~~~~~~~~ 339 (375)
T PLN02178 291 KMVGGSQIG-GMKETQEMLEFCAKHKIVSD-IELIKM----------------SDINSAMDRLAKSD 339 (375)
T ss_pred eEEEEeCcc-CHHHHHHHHHHHHhCCCccc-EEEEeH----------------HHHHHHHHHHHcCC
Confidence 456655544 45678999999999998853 332221 45677888876553
No 42
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=99.76 E-value=1.5e-17 Score=180.01 Aligned_cols=238 Identities=16% Similarity=0.097 Sum_probs=158.7
Q ss_pred ccccchhHhhhhhhHHHhCCCCCCCCCCcccccccccccCCcEEeec---CCCCCCCCHHhHhhhhhHHHHHHHHhhcCC
Q psy14589 29 PTHACKEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPV---AGLLSSRDFLAGLAFRVFHSTQYIRHPSKP 105 (655)
Q Consensus 29 ~~~aC~~~~~G~~~l~~~~~y~~~~iP~le~V~~~l~~~~g~~~~~v---~~l~~~~s~~eAAal~~a~~TA~~aL~~~~ 105 (655)
..+.|.+|..|..++|++..+.....+. .+.. .-.....+.+++. ..++++++++++|++++++.|+|+++.+..
T Consensus 102 ~Cg~C~~C~~g~~~~C~~~~~~~~~~~~-~g~~-~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~ 179 (360)
T PLN02586 102 SCKSCESCDQDLENYCPKMIFTYNSIGH-DGTK-NYGGYSDMIVVDQHFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYG 179 (360)
T ss_pred cCCCCccccCCCcccCCCcccccccccc-CCCc-CCCccceEEEEchHHeeeCCCCCCHHHhhhhhcchHHHHHHHHHhc
Confidence 5788999999988888765431110000 0000 0011122233332 234567899999999999999999987666
Q ss_pred CCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHH-HHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEE
Q psy14589 106 LYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGV-AKAYGLGADYVVDHTIRELDRFANQILSYGSELDAD 184 (655)
Q Consensus 106 ~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~-~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV 184 (655)
.+ ++|++|+|.|+ |+||++++|+||++|++|++++.+++++ +.++++||+.++|+.+. +.+++.++++|+|
T Consensus 180 ~~-~~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~~------~~~~~~~~~~D~v 251 (360)
T PLN02586 180 MT-EPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSFLVSTDP------EKMKAAIGTMDYI 251 (360)
T ss_pred cc-CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCCcEEEcCCCH------HHHHhhcCCCCEE
Confidence 66 79999999887 9999999999999999998887776654 45679999999987652 2333344479999
Q ss_pred EeCCCcc-hHHHHHHHHHHhccccceEEEeeccchhhhhhhhhhhhhhhhhhhhhhhheeeccccccccCCCCCCCCeEE
Q psy14589 185 HPGFTDP-VYRARRKYFADLAFNYKHFFFFFFFFFFFFFFFFFFYFFFFFFFFFYFFYFLLLSQPLIQSCHSCPFSLFDF 263 (655)
Q Consensus 185 ~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~ll~~p~~~~~~~~~~~~kts 263 (655)
+|++|+. + ++.++++++++|+++.+|.. ..+. .........+...
T Consensus 252 id~~g~~~~---~~~~~~~l~~~G~iv~vG~~------------------------------~~~~-~~~~~~~~~~~~~ 297 (360)
T PLN02586 252 IDTVSAVHA---LGPLLGLLKVNGKLITLGLP------------------------------EKPL-ELPIFPLVLGRKL 297 (360)
T ss_pred EECCCCHHH---HHHHHHHhcCCcEEEEeCCC------------------------------CCCC-ccCHHHHHhCCeE
Confidence 9999975 6 88999999999999999820 0000 0000000112334
Q ss_pred EEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecCCchHHHHHHHHHccC
Q psy14589 264 VIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGGDLSSVIESLRSSC 328 (655)
Q Consensus 264 l~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg~~~v~~~l~~L~~~~ 328 (655)
+..+... ....+.++++.+++++|++. ++..| -+++.++++.+++.-
T Consensus 298 i~g~~~~-~~~~~~~~~~li~~g~i~~~-~~~~~----------------l~~~~~A~~~~~~~~ 344 (360)
T PLN02586 298 VGGSDIG-GIKETQEMLDFCAKHNITAD-IELIR----------------MDEINTAMERLAKSD 344 (360)
T ss_pred EEEcCcC-CHHHHHHHHHHHHhCCCCCc-EEEEe----------------HHHHHHHHHHHHcCC
Confidence 4444333 34578999999999998842 22222 145677888876553
No 43
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=99.76 E-value=2e-17 Score=177.90 Aligned_cols=173 Identities=14% Similarity=0.093 Sum_probs=129.8
Q ss_pred ccccccchhHhhhhhhHHHhCCCCCCCCCCcccccccccccCCcEEeecC---CCCC------CCCHHhHhhhhhHHHHH
Q psy14589 27 LYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVA---GLLS------SRDFLAGLAFRVFHSTQ 97 (655)
Q Consensus 27 ~l~~~aC~~~~~G~~~l~~~~~y~~~~iP~le~V~~~l~~~~g~~~~~v~---~l~~------~~s~~eAAal~~a~~TA 97 (655)
....+.|..|..|..++|....+...... .....+..++.. .+++ +++++++++++++..|+
T Consensus 85 ~~~cg~c~~c~~g~~~~c~~~~~~g~~~~---------G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta 155 (349)
T TIGR03201 85 VIPCGECELCKTGRGTICRAQKMPGNDMQ---------GGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTP 155 (349)
T ss_pred CCCCCCChhhhCcCcccCCCCCccCcCCC---------CcccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHH
Confidence 44567788888887777655433110000 001111122211 1233 57788899999999999
Q ss_pred HHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhc
Q psy14589 98 YIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSY 177 (655)
Q Consensus 98 ~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~ 177 (655)
|+++.. ..+ ++|++|+|+|+ |++|++++|+||++|++|++++++++|++.++++|++.+||+.+.+.+++.+.+++.
T Consensus 156 ~~a~~~-~~~-~~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~ 232 (349)
T TIGR03201 156 YQAAVQ-AGL-KKGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLIKAF 232 (349)
T ss_pred HHHHHh-cCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHhCCceEecCccccHHHHHHHHHhh
Confidence 999864 667 89999999999 999999999999999999999999999999999999999997653223566677766
Q ss_pred CC--Cee----EEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589 178 GS--ELD----ADHPGFTDPVYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 178 ~~--gvD----vV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
++ ++| +|+||+|+.. .++.++++++++|+++++|
T Consensus 233 t~~~g~d~~~d~v~d~~g~~~--~~~~~~~~l~~~G~iv~~G 272 (349)
T TIGR03201 233 AKARGLRSTGWKIFECSGSKP--GQESALSLLSHGGTLVVVG 272 (349)
T ss_pred cccCCCCCCcCEEEECCCChH--HHHHHHHHHhcCCeEEEEC
Confidence 53 665 8999999873 2778999999999999998
No 44
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=99.75 E-value=1.9e-17 Score=176.57 Aligned_cols=168 Identities=21% Similarity=0.195 Sum_probs=130.1
Q ss_pred cccccccchhHhhhhhhHHHhCCCCCCCCCCcccccccccccCCcE---Eeec---CCCCCCCCHHhHhhhhhHHHHHHH
Q psy14589 26 KLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFS---LRPV---AGLLSSRDFLAGLAFRVFHSTQYI 99 (655)
Q Consensus 26 ~~l~~~aC~~~~~G~~~l~~~~~y~~~~iP~le~V~~~l~~~~g~~---~~~v---~~l~~~~s~~eAAal~~a~~TA~~ 99 (655)
+....+.|..|..|..++|.+..+. .+. ...++|+ .++. ..+++++++++++++++++.|||+
T Consensus 86 ~~~~c~~c~~c~~g~~~~c~~~~~~----~g~-------~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~ 154 (339)
T cd08239 86 HYVGCGACRNCRRGWMQLCTSKRAA----YGW-------NRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYH 154 (339)
T ss_pred CCCCCCCChhhhCcCcccCcCcccc----ccc-------CCCCcceeEEEechHHeEECCCCCCHHHhhhhcchHHHHHH
Confidence 4456678888988887777554320 000 0112232 2322 224567889999999999999999
Q ss_pred HhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcC
Q psy14589 100 RHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLT-VFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYG 178 (655)
Q Consensus 100 aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~-Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~ 178 (655)
++.. ..+ ++|++|+|+|+ |++|++++|+||++|++ |++++++++|++.++++|++.++|+.+. + .+.+.+.+
T Consensus 155 ~l~~-~~~-~~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~~---~-~~~~~~~~ 227 (339)
T cd08239 155 ALRR-VGV-SGRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQD---D-VQEIRELT 227 (339)
T ss_pred HHHh-cCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCcc---h-HHHHHHHh
Confidence 9854 566 78999999987 99999999999999998 9999999999999999999999998763 4 55555543
Q ss_pred C--CeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589 179 S--ELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 179 ~--gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
+ ++|+|+|++|+.. .++.++++++++|+++.+|
T Consensus 228 ~~~~~d~vid~~g~~~--~~~~~~~~l~~~G~~v~~g 262 (339)
T cd08239 228 SGAGADVAIECSGNTA--ARRLALEAVRPWGRLVLVG 262 (339)
T ss_pred CCCCCCEEEECCCCHH--HHHHHHHHhhcCCEEEEEc
Confidence 2 7999999999884 1588999999999999988
No 45
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=99.75 E-value=3e-17 Score=178.08 Aligned_cols=182 Identities=16% Similarity=0.032 Sum_probs=134.6
Q ss_pred cccccccchhHhhhhhhHHHhCCCCC---CCCCCcccccc------cccccCCcE---EeecC---CCCCCCCHHhHhhh
Q psy14589 26 KLYPTHACKEHNHVFPLLIQNCGYAE---DNIPQLEDISK------FLKDSTGFS---LRPVA---GLLSSRDFLAGLAF 90 (655)
Q Consensus 26 ~~l~~~aC~~~~~G~~~l~~~~~y~~---~~iP~le~V~~------~l~~~~g~~---~~~v~---~l~~~~s~~eAAal 90 (655)
+....+.|.+|..|..++|.+...-. ...++...... ......+|+ ++|.. .++++++++++|++
T Consensus 87 ~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l~~~~aa~l 166 (368)
T TIGR02818 87 YTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPLEEVCLL 166 (368)
T ss_pred CCCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEechhheEECCCCCCHHHhhhh
Confidence 34467899999999888876532100 00000000000 000012333 33332 24567899999999
Q ss_pred hhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCCcEEEeCCccchhH
Q psy14589 91 RVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGADYVVDHTIRELDR 169 (655)
Q Consensus 91 ~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d 169 (655)
+++..|||+++.+.+.+ ++|++|+|+|+ |+||++++|+||++|+ +|++++++++|++.++++||+.++|+.+.. ++
T Consensus 167 ~~~~~ta~~a~~~~~~~-~~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~~~~-~~ 243 (368)
T TIGR02818 167 GCGVTTGIGAVLNTAKV-EEGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPNDYD-KP 243 (368)
T ss_pred cchhHHHHHHHHHhcCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeEEcccccc-hh
Confidence 99999999998777788 89999999987 9999999999999999 799999999999999999999999976421 14
Q ss_pred HHHHHHhcCC-CeeEEEeCCCcc-hHHHHHHHHHHhccc-cceEEEe
Q psy14589 170 FANQILSYGS-ELDADHPGFTDP-VYRARRKYFADLAFN-YKHFFFF 213 (655)
Q Consensus 170 ~~~~i~~~~~-gvDvV~D~vG~~-~~~~l~~~l~~l~~g-Grlv~v~ 213 (655)
+.+.+++.++ ++|+++|++|++ . +..++++++++ |+++.+|
T Consensus 244 ~~~~v~~~~~~g~d~vid~~G~~~~---~~~~~~~~~~~~G~~v~~g 287 (368)
T TIGR02818 244 IQEVIVEITDGGVDYSFECIGNVNV---MRAALECCHKGWGESIIIG 287 (368)
T ss_pred HHHHHHHHhCCCCCEEEECCCCHHH---HHHHHHHhhcCCCeEEEEe
Confidence 5566666543 899999999976 5 88999999986 9999998
No 46
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=99.75 E-value=1.8e-17 Score=172.88 Aligned_cols=173 Identities=14% Similarity=0.073 Sum_probs=129.5
Q ss_pred ccccccccchhHhhhhhhHHHhCCCCCCCCCCcccccccccccCCcE---EeecC----CCCCCCCHHhHhhhhhHHHHH
Q psy14589 25 TKLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFS---LRPVA----GLLSSRDFLAGLAFRVFHSTQ 97 (655)
Q Consensus 25 ~~~l~~~aC~~~~~G~~~l~~~~~y~~~~iP~le~V~~~l~~~~g~~---~~~v~----~l~~~~s~~eAAal~~a~~TA 97 (655)
.+..+.+.|.+|..|..++|.+..+- +......-.....+|+ .+|.. .++++++++++++++++..|+
T Consensus 35 ~~~~~cg~C~~C~~g~~~~C~~~~~~-----g~~~~~~~~~~~G~~aey~~v~~~~~~~~lP~~~~~~~aa~l~~~~~ta 109 (280)
T TIGR03366 35 SVTVPCGRCFRCRRGLPQKCDSLRKY-----GHEALDSGWPLSGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCATATV 109 (280)
T ss_pred cCCCCCCCChhhhCcCcccCCChhhc-----CcccccCCccccccceeeEEecCCCcEEECCCCCCHHHhhHhhhHHHHH
Confidence 34567899999999988887664431 1000000000112222 33322 245678899999999999999
Q ss_pred HHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHh
Q psy14589 98 YIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLT-VFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILS 176 (655)
Q Consensus 98 ~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~-Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~ 176 (655)
|+++.+.. . .+|++|+|+|+ |++|++++|+||++|++ |++++++++|++.++++|++.++++.. ..+.+.+
T Consensus 110 ~~al~~~~-~-~~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~-----~~~~~~~ 181 (280)
T TIGR03366 110 MAALEAAG-D-LKGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRRELALSFGATALAEPEV-----LAERQGG 181 (280)
T ss_pred HHHHHhcc-C-CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCcEecCchh-----hHHHHHH
Confidence 99986544 4 58999999998 99999999999999996 888988999999999999999998653 2334444
Q ss_pred cC--CCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589 177 YG--SELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 177 ~~--~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
.+ .++|+++|++|++ . ++.++++++++|+++.+|
T Consensus 182 ~~~~~g~d~vid~~G~~~~---~~~~~~~l~~~G~iv~~G 218 (280)
T TIGR03366 182 LQNGRGVDVALEFSGATAA---VRACLESLDVGGTAVLAG 218 (280)
T ss_pred HhCCCCCCEEEECCCChHH---HHHHHHHhcCCCEEEEec
Confidence 43 3799999999976 5 889999999999999998
No 47
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=99.75 E-value=1.6e-17 Score=176.38 Aligned_cols=129 Identities=12% Similarity=0.016 Sum_probs=114.0
Q ss_pred CCCCCHHhH-hhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589 79 LSSRDFLAG-LAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD 157 (655)
Q Consensus 79 ~~~~s~~eA-Aal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd 157 (655)
+++++++++ +++++++.|||+++.+.+.+ ++|++|+|+|++|+||++++|+||++|++|++++++++|.+.++++|++
T Consensus 107 p~~~~~~~aaa~l~~~~~TA~~~l~~~~~~-~~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~~lGa~ 185 (325)
T TIGR02825 107 PDTLPLSLALGTVGMPGLTAYFGLLEICGV-KGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLKKLGFD 185 (325)
T ss_pred cCCCCHHHHHHhcccHHHHHHHHHHHHhCC-CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCC
Confidence 456788887 68999999999998888888 8999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCccchhHHHHHHHhcCC-CeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589 158 YVVDHTIRELDRFANQILSYGS-ELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 158 ~vId~~~~~~~d~~~~i~~~~~-gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
.++|+.+.+ ++.+.++..++ ++|+++|++|++. ++.++++++++|+++.+|
T Consensus 186 ~vi~~~~~~--~~~~~~~~~~~~gvdvv~d~~G~~~---~~~~~~~l~~~G~iv~~G 237 (325)
T TIGR02825 186 VAFNYKTVK--SLEETLKKASPDGYDCYFDNVGGEF---SNTVIGQMKKFGRIAICG 237 (325)
T ss_pred EEEeccccc--cHHHHHHHhCCCCeEEEEECCCHHH---HHHHHHHhCcCcEEEEec
Confidence 999987531 35555555443 8999999999887 899999999999999987
No 48
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=99.74 E-value=1.9e-17 Score=178.46 Aligned_cols=129 Identities=14% Similarity=0.037 Sum_probs=113.8
Q ss_pred CCCCCHH-hHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hCCC
Q psy14589 79 LSSRDFL-AGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GLGA 156 (655)
Q Consensus 79 ~~~~s~~-eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~LGA 156 (655)
+++++++ ++|+++++++|||+++.+.+.+ ++|++|+|+|++|+||++++|+||++|++|++++++++|++.++ ++|+
T Consensus 127 P~~~~~~~~aa~l~~~~~TA~~al~~~~~~-~~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa 205 (348)
T PLN03154 127 QDDIPLSYHLGLLGMAGFTAYAGFYEVCSP-KKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGF 205 (348)
T ss_pred cCCCCHHHHHHHcccHHHHHHHHHHHhcCC-CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCC
Confidence 4567776 6889999999999999877888 89999999999999999999999999999999999999999987 7999
Q ss_pred cEEEeCCccchhHHHHHHHhcCC-CeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589 157 DYVVDHTIRELDRFANQILSYGS-ELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 157 d~vId~~~~~~~d~~~~i~~~~~-gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
+.++|+.+. +++.+.+++.++ ++|+++|++|+.. +..++++++++|+++++|
T Consensus 206 ~~vi~~~~~--~~~~~~i~~~~~~gvD~v~d~vG~~~---~~~~~~~l~~~G~iv~~G 258 (348)
T PLN03154 206 DEAFNYKEE--PDLDAALKRYFPEGIDIYFDNVGGDM---LDAALLNMKIHGRIAVCG 258 (348)
T ss_pred CEEEECCCc--ccHHHHHHHHCCCCcEEEEECCCHHH---HHHHHHHhccCCEEEEEC
Confidence 999998742 146666666544 8999999999887 899999999999999998
No 49
>PLN02740 Alcohol dehydrogenase-like
Probab=99.74 E-value=4.1e-17 Score=177.76 Aligned_cols=182 Identities=12% Similarity=0.035 Sum_probs=136.8
Q ss_pred cccccccchhHhhhhhhHHHhCCCCCCCCCCc-cccccc-----------ccccCCcE---EeecC---CCCCCCCHHhH
Q psy14589 26 KLYPTHACKEHNHVFPLLIQNCGYAEDNIPQL-EDISKF-----------LKDSTGFS---LRPVA---GLLSSRDFLAG 87 (655)
Q Consensus 26 ~~l~~~aC~~~~~G~~~l~~~~~y~~~~iP~l-e~V~~~-----------l~~~~g~~---~~~v~---~l~~~~s~~eA 87 (655)
+....+.|.+|..|..++|++..+........ .....+ ....++|+ .++.. .++++++.+++
T Consensus 97 ~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~a 176 (381)
T PLN02740 97 FNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACVVKIDPNAPLKKM 176 (381)
T ss_pred CCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehHHeEECCCCCCHHHh
Confidence 45677889999999888888765321100000 000000 00012333 23322 24567889999
Q ss_pred hhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCCcEEEeCCccc
Q psy14589 88 LAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGADYVVDHTIRE 166 (655)
Q Consensus 88 Aal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGAd~vId~~~~~ 166 (655)
|+++++..|||+++.+.+.+ ++|++|+|+|+ |+||++++|+||++|+ +|++++++++|++.++++||+.++|+.+..
T Consensus 177 a~l~~~~~ta~~~~~~~~~~-~~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~~~ 254 (381)
T PLN02740 177 SLLSCGVSTGVGAAWNTANV-QAGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMGITDFINPKDSD 254 (381)
T ss_pred hhhcccchhhHHHHHhccCC-CCCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHHcCCcEEEeccccc
Confidence 99999999999998777888 89999999997 9999999999999999 699999999999999999999999977521
Q ss_pred hhHHHHHHHhcCC-CeeEEEeCCCcc-hHHHHHHHHHHhccc-cceEEEe
Q psy14589 167 LDRFANQILSYGS-ELDADHPGFTDP-VYRARRKYFADLAFN-YKHFFFF 213 (655)
Q Consensus 167 ~~d~~~~i~~~~~-gvDvV~D~vG~~-~~~~l~~~l~~l~~g-Grlv~v~ 213 (655)
+++.+.+++.++ ++|+|+|++|++ . ++.++++++++ |+++++|
T Consensus 255 -~~~~~~v~~~~~~g~dvvid~~G~~~~---~~~a~~~~~~g~G~~v~~G 300 (381)
T PLN02740 255 -KPVHERIREMTGGGVDYSFECAGNVEV---LREAFLSTHDGWGLTVLLG 300 (381)
T ss_pred -chHHHHHHHHhCCCCCEEEECCCChHH---HHHHHHhhhcCCCEEEEEc
Confidence 136666666544 799999999986 6 89999999997 9999998
No 50
>PLN02827 Alcohol dehydrogenase-like
Probab=99.73 E-value=1.7e-16 Score=173.06 Aligned_cols=182 Identities=9% Similarity=0.017 Sum_probs=135.0
Q ss_pred cccccccchhHhhhhhhHHHhCCCCCCCC------CCcc--c--cccc--ccccCCcEEeecC---CCCCCCCHHhHhhh
Q psy14589 26 KLYPTHACKEHNHVFPLLIQNCGYAEDNI------PQLE--D--ISKF--LKDSTGFSLRPVA---GLLSSRDFLAGLAF 90 (655)
Q Consensus 26 ~~l~~~aC~~~~~G~~~l~~~~~y~~~~i------P~le--~--V~~~--l~~~~g~~~~~v~---~l~~~~s~~eAAal 90 (655)
+....+.|.+|+.|..++|+++++....+ +.+. + .... ......+..++.. .+++++++++++++
T Consensus 95 ~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~iP~~l~~~~aa~l 174 (378)
T PLN02827 95 FTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKICLL 174 (378)
T ss_pred cCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEechhheEECCCCCCHHHhhhh
Confidence 35567899999999988887754321110 0000 0 0000 0011122233332 24567888899999
Q ss_pred hhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCCcEEEeCCccchhH
Q psy14589 91 RVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGADYVVDHTIRELDR 169 (655)
Q Consensus 91 ~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d 169 (655)
+++..|+|+++.+.+.+ ++|++|+|+|+ |+||++++|+||++|+ +|++++++++|++.++++|++++||+.+.. ++
T Consensus 175 ~~~~~~a~~~~~~~~~~-~~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~lGa~~~i~~~~~~-~~ 251 (378)
T PLN02827 175 SCGVAAGLGAAWNVADV-SKGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTDFINPNDLS-EP 251 (378)
T ss_pred cchhHhhHHHHHhhcCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEcccccc-hH
Confidence 99999999987666777 89999999997 9999999999999999 588888899999999999999999986521 14
Q ss_pred HHHHHHhcCC-CeeEEEeCCCcc-hHHHHHHHHHHhccc-cceEEEe
Q psy14589 170 FANQILSYGS-ELDADHPGFTDP-VYRARRKYFADLAFN-YKHFFFF 213 (655)
Q Consensus 170 ~~~~i~~~~~-gvDvV~D~vG~~-~~~~l~~~l~~l~~g-Grlv~v~ 213 (655)
+.+.+++.++ ++|+|+|++|+. . +..++++++++ |+++.+|
T Consensus 252 ~~~~v~~~~~~g~d~vid~~G~~~~---~~~~l~~l~~g~G~iv~~G 295 (378)
T PLN02827 252 IQQVIKRMTGGGADYSFECVGDTGI---ATTALQSCSDGWGLTVTLG 295 (378)
T ss_pred HHHHHHHHhCCCCCEEEECCCChHH---HHHHHHhhccCCCEEEEEC
Confidence 5666666544 799999999986 6 88999999998 9999988
No 51
>COG0077 PheA Prephenate dehydratase [Amino acid transport and metabolism]
Probab=99.72 E-value=1.5e-17 Score=171.72 Aligned_cols=94 Identities=27% Similarity=0.328 Sum_probs=83.7
Q ss_pred hhheeecccc-ccccCCCCCCCCeEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecC---C
Q psy14589 239 FFYFLLLSQP-LIQSCHSCPFSLFDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAP---G 314 (655)
Q Consensus 239 ~~~F~ll~~p-~~~~~~~~~~~~ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg---~ 314 (655)
+|+|+++++. +.. ......|||++|+++| +||+|.++|..|+.+|||||+|||||+++.+|+|.||||++| +
T Consensus 174 ~TRF~vl~r~~~~~---~~~~~~kTsl~f~~~n-~PGaL~~~L~~Fa~~gINlTkIESRP~k~~~~~Y~F~iD~eg~~~~ 249 (279)
T COG0077 174 RTRFLVLSRRKPPS---VSDGPEKTSLIFSVPN-KPGALYKALGVFAKRGINLTKIESRPLKTGLGEYLFFIDIEGHIDD 249 (279)
T ss_pred eEEEEEEeccCCCC---cCCCCceEEEEEEcCC-CCchHHHHHHHHHHcCcceeeEeecccCCCCeeEEEEEEEecCcCc
Confidence 5799999963 211 1113359999999997 999999999999999999999999999999999999999999 7
Q ss_pred chHHHHHHHHHccCCcEEEecC
Q psy14589 315 GDLSSVIESLRSSCSYINIISR 336 (655)
Q Consensus 315 ~~v~~~l~~L~~~~~~v~iLGs 336 (655)
+.++++|++|++.+..+|+||+
T Consensus 250 ~~v~~AL~el~~~t~~~kilGs 271 (279)
T COG0077 250 PLVKEALEELKEITEFVKILGS 271 (279)
T ss_pred HhHHHHHHHHHhheeEEEEEee
Confidence 7999999999999999999999
No 52
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=99.72 E-value=5.6e-17 Score=174.94 Aligned_cols=179 Identities=14% Similarity=0.012 Sum_probs=134.5
Q ss_pred cccccccchhHhhhhhhHHHhCCCCCCCCCCcc-ccc--c-c-ccccCCcEEeecC---CCCCCCCHHhHhhhhhHHHHH
Q psy14589 26 KLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLE-DIS--K-F-LKDSTGFSLRPVA---GLLSSRDFLAGLAFRVFHSTQ 97 (655)
Q Consensus 26 ~~l~~~aC~~~~~G~~~l~~~~~y~~~~iP~le-~V~--~-~-l~~~~g~~~~~v~---~l~~~~s~~eAAal~~a~~TA 97 (655)
+....+.|..|..|..++|......... ..+. +.. . . ......+..++.. .++++++++++++++++..||
T Consensus 86 ~~~~cg~c~~c~~g~~~~c~~~~~~~~~-~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~aa~l~~~~~ta 164 (358)
T TIGR03451 86 WRAVCGQCRACKRGRPWYCFDTHNATQK-MTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAGLLGCGVMAG 164 (358)
T ss_pred cCCCCCCChHHhCcCcccCcCccccccc-cccccCcccccccccccccceEEEehhheEECCCCCChhHhhhhcccchhh
Confidence 4556788999999977666543211000 0000 000 0 0 0111122233322 245677888999999999999
Q ss_pred HHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHh
Q psy14589 98 YIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILS 176 (655)
Q Consensus 98 ~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~ 176 (655)
|+++.+.+.+ ++|++|+|+|+ |++|++++|+||++|+ +|++++++++|++.++++|++.++|+.+. ++.+.+.+
T Consensus 165 ~~~~~~~~~~-~~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~~---~~~~~i~~ 239 (358)
T TIGR03451 165 LGAAVNTGGV-KRGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSGT---DPVEAIRA 239 (358)
T ss_pred HHHHHhccCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCCCc---CHHHHHHH
Confidence 9988777888 89999999986 9999999999999999 59999999999999999999999998764 56677776
Q ss_pred cCC--CeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589 177 YGS--ELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 177 ~~~--gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
.++ ++|+|+|++|++ + ++.++++++++|+++.+|
T Consensus 240 ~~~~~g~d~vid~~g~~~~---~~~~~~~~~~~G~iv~~G 276 (358)
T TIGR03451 240 LTGGFGADVVIDAVGRPET---YKQAFYARDLAGTVVLVG 276 (358)
T ss_pred HhCCCCCCEEEECCCCHHH---HHHHHHHhccCCEEEEEC
Confidence 643 799999999975 6 889999999999999998
No 53
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=99.71 E-value=4.4e-16 Score=168.57 Aligned_cols=182 Identities=13% Similarity=0.024 Sum_probs=133.7
Q ss_pred cccccccchhHhhhhhhHHHhCCCCCCCCCC-ccccccc-------ccccCCcE---Eeec---CCCCCCCCHHhHhhhh
Q psy14589 26 KLYPTHACKEHNHVFPLLIQNCGYAEDNIPQ-LEDISKF-------LKDSTGFS---LRPV---AGLLSSRDFLAGLAFR 91 (655)
Q Consensus 26 ~~l~~~aC~~~~~G~~~l~~~~~y~~~~iP~-le~V~~~-------l~~~~g~~---~~~v---~~l~~~~s~~eAAal~ 91 (655)
+....+.|..|..|.+++|++..+-...+.. .-..... .....+|+ .++. ..++++++++++++++
T Consensus 87 ~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l~~~~aa~l~ 166 (365)
T cd08277 87 FIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAPLEHVCLLG 166 (365)
T ss_pred CCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEchhheEECCCCCCHHHhhHhc
Confidence 4456788999999988888765431111100 0000000 00012333 2332 2245678899999999
Q ss_pred hHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCCcEEEeCCccchhHH
Q psy14589 92 VFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGADYVVDHTIRELDRF 170 (655)
Q Consensus 92 ~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~ 170 (655)
+++.|||+++.+.+.+ ++|++|+|+|+ |++|++++|+||++|+ +|++++++++|++.++++|+++++++.+.. .++
T Consensus 167 ~~~~ta~~~~~~~~~~-~~g~~vlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~~i~~~~~~-~~~ 243 (365)
T cd08277 167 CGFSTGYGAAWNTAKV-EPGSTVAVFGL-GAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPKDSD-KPV 243 (365)
T ss_pred chhHHHHHHHHhhcCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCcEecccccc-chH
Confidence 9999999998777788 89999999986 9999999999999999 799999999999999999999999876521 134
Q ss_pred HHHHHhcC-CCeeEEEeCCCcc-hHHHHHHHHHHhccc-cceEEEe
Q psy14589 171 ANQILSYG-SELDADHPGFTDP-VYRARRKYFADLAFN-YKHFFFF 213 (655)
Q Consensus 171 ~~~i~~~~-~gvDvV~D~vG~~-~~~~l~~~l~~l~~g-Grlv~v~ 213 (655)
.+.+++.+ +++|+|+|++|+. . +..++++++++ |+++.+|
T Consensus 244 ~~~~~~~~~~g~d~vid~~g~~~~---~~~~~~~l~~~~G~~v~~g 286 (365)
T cd08277 244 SEVIREMTGGGVDYSFECTGNADL---MNEALESTKLGWGVSVVVG 286 (365)
T ss_pred HHHHHHHhCCCCCEEEECCCChHH---HHHHHHhcccCCCEEEEEc
Confidence 55565554 3799999999975 5 78999999885 9999998
No 54
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=99.71 E-value=1.6e-16 Score=169.98 Aligned_cols=158 Identities=16% Similarity=0.016 Sum_probs=122.2
Q ss_pred cccchhHhhhhhhHHHhCCCCCCCCCCcccccccccccCCcEEeec---CCCCCCCCHHhHhhhhhHHHHHHHHhhcCCC
Q psy14589 30 THACKEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPV---AGLLSSRDFLAGLAFRVFHSTQYIRHPSKPL 106 (655)
Q Consensus 30 ~~aC~~~~~G~~~l~~~~~y~~~~iP~le~V~~~l~~~~g~~~~~v---~~l~~~~s~~eAAal~~a~~TA~~aL~~~~~ 106 (655)
...|..|..|.+++|.+..+. +... -.....+..++. ..++++++++++++++++..|||+++. .+.
T Consensus 93 c~~c~~c~~g~~~~c~~~~~~-----g~~~----~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~~-~~~ 162 (329)
T TIGR02822 93 CGVCRYCRRGAENLCPASRYT-----GWDT----DGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRALL-RAS 162 (329)
T ss_pred CCCChHHhCcCcccCCCcccC-----Cccc----CCcceeEEEeccccEEECCCCCCHHHhHHHhccchHHHHHHH-hcC
Confidence 467888888887777665431 1100 000111222332 224567889999999999999999986 467
Q ss_pred CCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEe
Q psy14589 107 YTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHP 186 (655)
Q Consensus 107 l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D 186 (655)
+ ++|++|+|+|+ |++|++++|+||++|++|++++++++|++.++++||++++|+.+. + .+++|++++
T Consensus 163 ~-~~g~~VlV~G~-g~iG~~a~~~a~~~G~~vi~~~~~~~~~~~a~~~Ga~~vi~~~~~---~--------~~~~d~~i~ 229 (329)
T TIGR02822 163 L-PPGGRLGLYGF-GGSAHLTAQVALAQGATVHVMTRGAAARRLALALGAASAGGAYDT---P--------PEPLDAAIL 229 (329)
T ss_pred C-CCCCEEEEEcC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHhCCceecccccc---C--------cccceEEEE
Confidence 7 89999999998 999999999999999999999999999999999999999986431 1 125788888
Q ss_pred CCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589 187 GFTDP-VYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 187 ~vG~~-~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
+.|.. . +..++++++++|+++++|
T Consensus 230 ~~~~~~~---~~~~~~~l~~~G~~v~~G 254 (329)
T TIGR02822 230 FAPAGGL---VPPALEALDRGGVLAVAG 254 (329)
T ss_pred CCCcHHH---HHHHHHhhCCCcEEEEEe
Confidence 87765 5 899999999999999998
No 55
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=99.71 E-value=9.6e-17 Score=171.38 Aligned_cols=127 Identities=14% Similarity=0.034 Sum_probs=112.7
Q ss_pred CCCHH-hHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh-CCCcE
Q psy14589 81 SRDFL-AGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG-LGADY 158 (655)
Q Consensus 81 ~~s~~-eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~-LGAd~ 158 (655)
++++. ++|++++++.|||+++.+.+.+ ++|++|+|+|++|++|++++|+||++|++|++++++++|.+.+++ +|+++
T Consensus 122 ~~~~~~~aa~l~~~~~tA~~~l~~~~~~-~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~ 200 (338)
T cd08295 122 DVPLSYYLGLLGMPGLTAYAGFYEVCKP-KKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDD 200 (338)
T ss_pred CCCHHHHHHhcccHHHHHHHHHHHhcCC-CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCce
Confidence 46665 7999999999999999887888 899999999999999999999999999999999999999999998 99999
Q ss_pred EEeCCccchhHHHHHHHhcC-CCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589 159 VVDHTIRELDRFANQILSYG-SELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 159 vId~~~~~~~d~~~~i~~~~-~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
++|+.+. +++.+.+++.+ +++|+++|++|+.. +..++++++++|+++.+|
T Consensus 201 vi~~~~~--~~~~~~i~~~~~~gvd~v~d~~g~~~---~~~~~~~l~~~G~iv~~G 251 (338)
T cd08295 201 AFNYKEE--PDLDAALKRYFPNGIDIYFDNVGGKM---LDAVLLNMNLHGRIAACG 251 (338)
T ss_pred eEEcCCc--ccHHHHHHHhCCCCcEEEEECCCHHH---HHHHHHHhccCcEEEEec
Confidence 9997642 14666666654 38999999999877 899999999999999987
No 56
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=99.71 E-value=9.3e-17 Score=168.07 Aligned_cols=244 Identities=14% Similarity=0.078 Sum_probs=178.3
Q ss_pred ccccchhHhhhhhhHHHhCCCC------CCCCCCcc----ccccccc--ccCCcEEeec---CCCCCCCCHHhHhhhhhH
Q psy14589 29 PTHACKEHNHVFPLLIQNCGYA------EDNIPQLE----DISKFLK--DSTGFSLRPV---AGLLSSRDFLAGLAFRVF 93 (655)
Q Consensus 29 ~~~aC~~~~~G~~~l~~~~~y~------~~~iP~le----~V~~~l~--~~~g~~~~~v---~~l~~~~s~~eAAal~~a 93 (655)
..++|..|+.|..+||....-. ++.-..+. .+..++. .-..|.+++- -.+.++.+++.++-+.|.
T Consensus 90 ~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~p~~~a~llGCg 169 (366)
T COG1062 90 ECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDAPLEKACLLGCG 169 (366)
T ss_pred CCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheeecccceEECCCCCCccceEEEeee
Confidence 6789999999999888853321 11111111 1112222 1122334332 234567789999999999
Q ss_pred HHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHH
Q psy14589 94 HSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFAN 172 (655)
Q Consensus 94 ~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~ 172 (655)
..|.+-+..+.+++ ++|++|.|.|. ||||++++|-|++.|| ++|+++.+++|+++++++||++++|..+. .++.+
T Consensus 170 V~TG~Gav~nta~v-~~G~tvaV~Gl-GgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~~vn~~~~--~~vv~ 245 (366)
T COG1062 170 VTTGIGAVVNTAKV-EPGDTVAVFGL-GGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNPKEV--DDVVE 245 (366)
T ss_pred eccChHHhhhcccC-CCCCeEEEEec-cHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCCceeecchhh--hhHHH
Confidence 99999999999999 99999999999 9999999999999999 89999999999999999999999998764 25888
Q ss_pred HHHhcCC-CeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEeeccchhhhhhhhhhhhhhhhhhhhhhhheeecccccc
Q psy14589 173 QILSYGS-ELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFFFFFFFFFFFFFFFFYFFFFFFFFFYFFYFLLLSQPLI 250 (655)
Q Consensus 173 ~i~~~~~-gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~ll~~p~~ 250 (655)
.+.+.++ |+|.+|||+|+. . ++++++++.++|+.+++|. ..+..
T Consensus 246 ~i~~~T~gG~d~~~e~~G~~~~---~~~al~~~~~~G~~v~iGv-------------------------------~~~~~ 291 (366)
T COG1062 246 AIVELTDGGADYAFECVGNVEV---MRQALEATHRGGTSVIIGV-------------------------------AGAGQ 291 (366)
T ss_pred HHHHhcCCCCCEEEEccCCHHH---HHHHHHHHhcCCeEEEEec-------------------------------CCCCc
Confidence 8888887 999999999987 6 9999999999999999983 12111
Q ss_pred ccC--CCCCCCC---eEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecCCchHHHHHHHHH
Q psy14589 251 QSC--HSCPFSL---FDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGGDLSSVIESLR 325 (655)
Q Consensus 251 ~~~--~~~~~~~---ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg~~~v~~~l~~L~ 325 (655)
... .....++ +-|.....+. ...+-+++++..++++++.++-|.-.+ -++++++.+.|+
T Consensus 292 ~i~~~~~~lv~gr~~~Gs~~G~~~p--~~diP~lv~~y~~Gkl~~d~lvt~~~~--------------Le~INeaf~~m~ 355 (366)
T COG1062 292 EISTRPFQLVTGRVWKGSAFGGARP--RSDIPRLVDLYMAGKLPLDRLVTHTIP--------------LEDINEAFDLMH 355 (366)
T ss_pred eeecChHHeeccceEEEEeecCCcc--ccchhHHHHHHHcCCCchhHHhhcccc--------------HHHHHHHHHHHh
Confidence 100 1111223 2233333333 347889999999999999887653222 245667777776
Q ss_pred c
Q psy14589 326 S 326 (655)
Q Consensus 326 ~ 326 (655)
+
T Consensus 356 ~ 356 (366)
T COG1062 356 E 356 (366)
T ss_pred C
Confidence 4
No 57
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=99.70 E-value=1.4e-16 Score=168.22 Aligned_cols=122 Identities=16% Similarity=0.052 Sum_probs=109.8
Q ss_pred HhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCc
Q psy14589 85 LAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTI 164 (655)
Q Consensus 85 ~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~ 164 (655)
.++++++++++|||+++.+.+.+ ++|++|+|+|++|++|++++|+||++|++|+++++++++.+.++++|+++++|+.+
T Consensus 119 ~~~a~~~~~~~ta~~al~~~~~~-~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~~Ga~~vi~~~~ 197 (329)
T cd08294 119 LALGVLGMPGLTAYFGLLEICKP-KAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKELGFDAVFNYKT 197 (329)
T ss_pred HHHHhcccHHHHHHHHHHHhcCC-CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCC
Confidence 33457899999999999878888 89999999999999999999999999999999999999999999999999999886
Q ss_pred cchhHHHHHHHhcCC-CeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589 165 RELDRFANQILSYGS-ELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 165 ~~~~d~~~~i~~~~~-gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
. ++.+.+++.++ ++|+|+|++|++. +..++++++++|+++.+|
T Consensus 198 ~---~~~~~v~~~~~~gvd~vld~~g~~~---~~~~~~~l~~~G~iv~~g 241 (329)
T cd08294 198 V---SLEEALKEAAPDGIDCYFDNVGGEF---SSTVLSHMNDFGRVAVCG 241 (329)
T ss_pred c---cHHHHHHHHCCCCcEEEEECCCHHH---HHHHHHhhccCCEEEEEc
Confidence 4 56677766643 8999999999887 899999999999999987
No 58
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=99.70 E-value=4.3e-16 Score=168.67 Aligned_cols=180 Identities=12% Similarity=0.010 Sum_probs=135.4
Q ss_pred cccccccchhHhhhhhhHHHhCCCCCC-CC-----------CCcccccccccccCCcE---Eeec---CCCCCCCCHHhH
Q psy14589 26 KLYPTHACKEHNHVFPLLIQNCGYAED-NI-----------PQLEDISKFLKDSTGFS---LRPV---AGLLSSRDFLAG 87 (655)
Q Consensus 26 ~~l~~~aC~~~~~G~~~l~~~~~y~~~-~i-----------P~le~V~~~l~~~~g~~---~~~v---~~l~~~~s~~eA 87 (655)
+....+.|..|..|..++|.+.++... .. ++... .. .....+|+ +++. ..++++++++++
T Consensus 88 ~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~-~~-~~~~G~~aey~~v~~~~~~~iP~~~~~~~a 165 (369)
T cd08301 88 FTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPI-YH-FVGTSTFSEYTVVHVGCVAKINPEAPLDKV 165 (369)
T ss_pred cCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcce-ee-eeccccceeEEEEecccEEECCCCCCHHHh
Confidence 456778899999998888876543200 00 00000 00 00112333 3332 234567889999
Q ss_pred hhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCCcEEEeCCccc
Q psy14589 88 LAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGADYVVDHTIRE 166 (655)
Q Consensus 88 Aal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGAd~vId~~~~~ 166 (655)
|+++++..|||+++.+...+ ++|++|+|+|+ |++|++++|+||++|+ +|++++++++|++.++++|++.++++....
T Consensus 166 a~~~~~~~ta~~~~~~~~~~-~~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~ 243 (369)
T cd08301 166 CLLSCGVSTGLGAAWNVAKV-KKGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVNPKDHD 243 (369)
T ss_pred hhhcchhhHHHHHHHhhcCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcccccc
Confidence 99999999999998777788 89999999987 9999999999999999 899999999999999999999999876521
Q ss_pred hhHHHHHHHhcCC-CeeEEEeCCCcc-hHHHHHHHHHHhccc-cceEEEe
Q psy14589 167 LDRFANQILSYGS-ELDADHPGFTDP-VYRARRKYFADLAFN-YKHFFFF 213 (655)
Q Consensus 167 ~~d~~~~i~~~~~-gvDvV~D~vG~~-~~~~l~~~l~~l~~g-Grlv~v~ 213 (655)
+++.+.+++.++ ++|+++|++|+. . +..++++++++ |+++++|
T Consensus 244 -~~~~~~v~~~~~~~~d~vid~~G~~~~---~~~~~~~~~~~~g~~v~~g 289 (369)
T cd08301 244 -KPVQEVIAEMTGGGVDYSFECTGNIDA---MISAFECVHDGWGVTVLLG 289 (369)
T ss_pred -hhHHHHHHHHhCCCCCEEEECCCChHH---HHHHHHHhhcCCCEEEEEC
Confidence 145556665543 799999999976 5 78899999996 9999998
No 59
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=99.69 E-value=1.6e-15 Score=163.84 Aligned_cols=236 Identities=14% Similarity=0.024 Sum_probs=157.3
Q ss_pred ccccchhHhhhhhhHHHhCCCCCCC--CCCcccccccccccCCcEEeec---CCCCCCCCHHhHhhhhhHHHHHHHHhhc
Q psy14589 29 PTHACKEHNHVFPLLIQNCGYAEDN--IPQLEDISKFLKDSTGFSLRPV---AGLLSSRDFLAGLAFRVFHSTQYIRHPS 103 (655)
Q Consensus 29 ~~~aC~~~~~G~~~l~~~~~y~~~~--iP~le~V~~~l~~~~g~~~~~v---~~l~~~~s~~eAAal~~a~~TA~~aL~~ 103 (655)
..++|..|..|..++|++..+.... ..+.. .......+.+++. ..+++++++++++++++++.|||+++..
T Consensus 99 ~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~----~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~ 174 (357)
T PLN02514 99 CCGECSPCKSDLEQYCNKRIWSYNDVYTDGKP----TQGGFASAMVVDQKFVVKIPEGMAPEQAAPLLCAGVTVYSPLSH 174 (357)
T ss_pred cCCCChhHhCCCcccCCCccccccccccCCcc----CCCccccEEEEchHHeEECCCCCCHHHhhhhhhhHHHHHHHHHH
Confidence 3678999999988777665321100 00000 0011112223332 2355678899999999999999999877
Q ss_pred CCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH-HhCCCcEEEeCCccchhHHHHHHHhcCCCee
Q psy14589 104 KPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA-YGLGADYVVDHTIRELDRFANQILSYGSELD 182 (655)
Q Consensus 104 ~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a-~~LGAd~vId~~~~~~~d~~~~i~~~~~gvD 182 (655)
.+.. ++|++|+|+|+ |++|++++|+||++|++|+++++++++++.+ +++|++.++++.+. +.+.+.+.++|
T Consensus 175 ~~~~-~~g~~vlV~G~-G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~~------~~~~~~~~~~D 246 (357)
T PLN02514 175 FGLK-QSGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGADDYLVSSDA------AEMQEAADSLD 246 (357)
T ss_pred cccC-CCCCeEEEEcc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhcCCcEEecCCCh------HHHHHhcCCCc
Confidence 6666 79999999976 9999999999999999999888888777555 57999998886542 23344445799
Q ss_pred EEEeCCCcc-hHHHHHHHHHHhccccceEEEeeccchhhhhhhhhhhhhhhhhhhhhhhheeeccccccccCCCCCCCCe
Q psy14589 183 ADHPGFTDP-VYRARRKYFADLAFNYKHFFFFFFFFFFFFFFFFFFYFFFFFFFFFYFFYFLLLSQPLIQSCHSCPFSLF 261 (655)
Q Consensus 183 vV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~ll~~p~~~~~~~~~~~~k 261 (655)
+++|++|+. . ++.++++++++|+++.+|.. ..+. .........+.
T Consensus 247 ~vid~~g~~~~---~~~~~~~l~~~G~iv~~G~~------------------------------~~~~-~~~~~~~~~~~ 292 (357)
T PLN02514 247 YIIDTVPVFHP---LEPYLSLLKLDGKLILMGVI------------------------------NTPL-QFVTPMLMLGR 292 (357)
T ss_pred EEEECCCchHH---HHHHHHHhccCCEEEEECCC------------------------------CCCC-cccHHHHhhCC
Confidence 999999975 6 88999999999999999820 0000 00000001123
Q ss_pred EEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecCCchHHHHHHHHHccC
Q psy14589 262 DFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGGDLSSVIESLRSSC 328 (655)
Q Consensus 262 tsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg~~~v~~~l~~L~~~~ 328 (655)
.++..+... ....+.++++.+++++++. .+++.| -+++.++++.+++..
T Consensus 293 ~~i~g~~~~-~~~~~~~~~~~~~~g~l~~-~i~~~~----------------l~~~~~A~~~~~~~~ 341 (357)
T PLN02514 293 KVITGSFIG-SMKETEEMLEFCKEKGLTS-MIEVVK----------------MDYVNTAFERLEKND 341 (357)
T ss_pred cEEEEEecC-CHHHHHHHHHHHHhCCCcC-cEEEEc----------------HHHHHHHHHHHHcCC
Confidence 345444433 3457899999999998653 222222 245778888877653
No 60
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=99.69 E-value=2e-16 Score=171.35 Aligned_cols=182 Identities=15% Similarity=0.027 Sum_probs=135.1
Q ss_pred cccccccchhHhhhhhhHHHhCCCCC---CCCCCccccccc------ccccCCcE---Eeec---CCCCCCCCHHhHhhh
Q psy14589 26 KLYPTHACKEHNHVFPLLIQNCGYAE---DNIPQLEDISKF------LKDSTGFS---LRPV---AGLLSSRDFLAGLAF 90 (655)
Q Consensus 26 ~~l~~~aC~~~~~G~~~l~~~~~y~~---~~iP~le~V~~~------l~~~~g~~---~~~v---~~l~~~~s~~eAAal 90 (655)
+....+.|.+|..|.+++|++..... ...++....... .....+|+ +++. ..+++++++++++++
T Consensus 88 ~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l 167 (368)
T cd08300 88 YTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPEAPLDKVCLL 167 (368)
T ss_pred CCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEEchhceEeCCCCCChhhhhhh
Confidence 34467789999999888887643100 000000000000 00012333 2332 224567889999999
Q ss_pred hhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCCcEEEeCCccchhH
Q psy14589 91 RVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGADYVVDHTIRELDR 169 (655)
Q Consensus 91 ~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d 169 (655)
+++..|||+++.+.+.+ ++|++|+|+|+ |++|++++|+||++|+ +|++++++++|++.++++|++++||+.+.+ ++
T Consensus 168 ~~~~~ta~~a~~~~~~~-~~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~-~~ 244 (368)
T cd08300 168 GCGVTTGYGAVLNTAKV-EPGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNPKDHD-KP 244 (368)
T ss_pred ccchhhhHHHHHHhcCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCEEEcccccc-hH
Confidence 99999999998777788 89999999986 9999999999999999 799999999999999999999999987531 14
Q ss_pred HHHHHHhcCC-CeeEEEeCCCcc-hHHHHHHHHHHhccc-cceEEEe
Q psy14589 170 FANQILSYGS-ELDADHPGFTDP-VYRARRKYFADLAFN-YKHFFFF 213 (655)
Q Consensus 170 ~~~~i~~~~~-gvDvV~D~vG~~-~~~~l~~~l~~l~~g-Grlv~v~ 213 (655)
+.+.+.+.++ ++|+|+|++|+. . +..++++++++ |+++.+|
T Consensus 245 ~~~~v~~~~~~g~d~vid~~g~~~~---~~~a~~~l~~~~G~~v~~g 288 (368)
T cd08300 245 IQQVLVEMTDGGVDYTFECIGNVKV---MRAALEACHKGWGTSVIIG 288 (368)
T ss_pred HHHHHHHHhCCCCcEEEECCCChHH---HHHHHHhhccCCCeEEEEc
Confidence 6666766654 899999999985 6 88999999987 9999998
No 61
>PRK11899 prephenate dehydratase; Provisional
Probab=99.69 E-value=7e-17 Score=168.63 Aligned_cols=96 Identities=19% Similarity=0.169 Sum_probs=84.1
Q ss_pred hhheeeccccccccCCCCCCCCeEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecC---Cc
Q psy14589 239 FFYFLLLSQPLIQSCHSCPFSLFDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAP---GG 315 (655)
Q Consensus 239 ~~~F~ll~~p~~~~~~~~~~~~ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg---~~ 315 (655)
+|+|+++++.+... .......|||++|++++ +||+|+++|+.|+.+|||||+|||||.+.+.|+|.||||++| ++
T Consensus 173 ~TRF~vi~~~~~~~-~~~~~~~ktsl~~~~~~-~pGaL~~vL~~Fa~~gINLtkIeSRP~~~~~~~Y~F~id~eg~~~d~ 250 (279)
T PRK11899 173 TTRFVVLSREADWA-ARGDGPIVTTFVFRVRN-IPAALYKALGGFATNGVNMTKLESYMVGGSFTATQFYADIEGHPEDR 250 (279)
T ss_pred ceeEEEEecCCCCC-CCCCCCceEEEEEEeCC-CCChHHHHHHHHHHcCCCeeeEEeeecCCCCceEEEEEEEECCCCCH
Confidence 58999998753211 11122349999999987 999999999999999999999999999999999999999999 68
Q ss_pred hHHHHHHHHHccCCcEEEecC
Q psy14589 316 DLSSVIESLRSSCSYINIISR 336 (655)
Q Consensus 316 ~v~~~l~~L~~~~~~v~iLGs 336 (655)
+++++|++|++.+..+|+|||
T Consensus 251 ~v~~aL~~l~~~~~~~kvLGs 271 (279)
T PRK11899 251 NVALALEELRFFSEEVRILGV 271 (279)
T ss_pred HHHHHHHHHHHhcCcEEEeee
Confidence 999999999999999999999
No 62
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=99.68 E-value=3.9e-16 Score=166.51 Aligned_cols=120 Identities=17% Similarity=0.115 Sum_probs=107.1
Q ss_pred HhhhhhHHHHHHHHhhcCCCCCCCC--CEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHh-CCCcEEEeC
Q psy14589 87 GLAFRVFHSTQYIRHPSKPLYTPEP--DTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYG-LGADYVVDH 162 (655)
Q Consensus 87 AAal~~a~~TA~~aL~~~~~l~~~G--d~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~-LGAd~vId~ 162 (655)
++++++++.|||+++.+.+.+ ++| ++|+|+|++|++|++++|+||++|+ +|++++++++|.+.+++ +|+++++++
T Consensus 130 ~a~~~~~~~ta~~al~~~~~~-~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~ 208 (345)
T cd08293 130 LGAVGLPGLTALIGIQEKGHI-TPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINY 208 (345)
T ss_pred hhhcCcHHHHHHHHHHHhccC-CCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEEC
Confidence 567889999999999877777 666 9999999999999999999999999 89999999999998876 999999998
Q ss_pred CccchhHHHHHHHhcCC-CeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589 163 TIRELDRFANQILSYGS-ELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 163 ~~~~~~d~~~~i~~~~~-gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
.+. ++.+.+++.++ ++|+++|++|+.. ...++++++++|+++.+|
T Consensus 209 ~~~---~~~~~i~~~~~~gvd~vid~~g~~~---~~~~~~~l~~~G~iv~~G 254 (345)
T cd08293 209 KTD---NVAERLRELCPEGVDVYFDNVGGEI---SDTVISQMNENSHIILCG 254 (345)
T ss_pred CCC---CHHHHHHHHCCCCceEEEECCCcHH---HHHHHHHhccCCEEEEEe
Confidence 764 57777776654 8999999999987 889999999999999987
No 63
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=99.66 E-value=2.9e-15 Score=160.55 Aligned_cols=165 Identities=21% Similarity=0.068 Sum_probs=121.5
Q ss_pred cccccccchhHhhhhhhHHHhCCCCCCCCCCcccccccccccCCcE---Eeec---CCCCCCCCHHhHhhhhhHHHHHHH
Q psy14589 26 KLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFS---LRPV---AGLLSSRDFLAGLAFRVFHSTQYI 99 (655)
Q Consensus 26 ~~l~~~aC~~~~~G~~~l~~~~~y~~~~iP~le~V~~~l~~~~g~~---~~~v---~~l~~~~s~~eAAal~~a~~TA~~ 99 (655)
+......|.+|..|..++|....+. +. ...++|+ .++. ..+++++++++++.+. +..++++
T Consensus 85 ~~~~c~~c~~c~~g~~~~c~~~~~~-----g~-------~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~-~~~~~~~ 151 (347)
T PRK10309 85 PLLPCFTCPECLRGFYSLCAKYDFI-----GS-------RRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIE-PITVGLH 151 (347)
T ss_pred CCcCCCCCcchhCcCcccCCCccee-----cc-------CCCCccceeEEeehHHeEECcCCCCHHHhhhhh-HHHHHHH
Confidence 4556677888888877666543321 00 0112222 2322 2245677888777653 5566888
Q ss_pred HhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcC
Q psy14589 100 RHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLT-VFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYG 178 (655)
Q Consensus 100 aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~-Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~ 178 (655)
++ +...+ ++|++|+|+|+ |++|++++|+||++|++ |++++++++|++.++++|+++++|+.+. + .+.+.+.+
T Consensus 152 ~~-~~~~~-~~g~~vlV~G~-g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~---~-~~~~~~~~ 224 (347)
T PRK10309 152 AF-HLAQG-CEGKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSREM---S-APQIQSVL 224 (347)
T ss_pred HH-HhcCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCccc---C-HHHHHHHh
Confidence 86 44566 79999999986 99999999999999996 7889899999999999999999997753 2 33344443
Q ss_pred --CCee-EEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589 179 --SELD-ADHPGFTDP-VYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 179 --~gvD-vV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
.++| +++||+|++ . +..++++++++|+++++|
T Consensus 225 ~~~~~d~~v~d~~G~~~~---~~~~~~~l~~~G~iv~~G 260 (347)
T PRK10309 225 RELRFDQLILETAGVPQT---VELAIEIAGPRAQLALVG 260 (347)
T ss_pred cCCCCCeEEEECCCCHHH---HHHHHHHhhcCCEEEEEc
Confidence 2687 999999986 6 899999999999999998
No 64
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=99.66 E-value=4.9e-15 Score=157.95 Aligned_cols=166 Identities=15% Similarity=0.071 Sum_probs=127.0
Q ss_pred ccccchhHhhhhhhHHHhCCCCCCCCCCcccccccccccCCcEEee---cCCCCCCCCHHhHhhhhhHHHHHHHHhhcCC
Q psy14589 29 PTHACKEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRP---VAGLLSSRDFLAGLAFRVFHSTQYIRHPSKP 105 (655)
Q Consensus 29 ~~~aC~~~~~G~~~l~~~~~y~~~~iP~le~V~~~l~~~~g~~~~~---v~~l~~~~s~~eAAal~~a~~TA~~aL~~~~ 105 (655)
..+.|..|..|..++|+.+... ++.. ......+..++ +..+++++++.+++++++++.|||+++...
T Consensus 90 ~~~~~~~~~~g~~~~c~~~~~~-----~~~~----~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~~~- 159 (333)
T cd08296 90 HCGTCDACRRGDFVHCENGKVT-----GVTR----DGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFNALRNS- 159 (333)
T ss_pred CCCCChhhhCcCcccCCCCCcc-----Cccc----CCcceeEEEEchhheEeCCCCCCHHHhhhhhhhhHHHHHHHHhc-
Confidence 3456778888876666554321 1100 00011111222 123456788899999999999999998655
Q ss_pred CCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEE
Q psy14589 106 LYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADH 185 (655)
Q Consensus 106 ~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~ 185 (655)
.+ ++|++|+|+| +|++|++++|+||++|++|+++++++++++.++++|+++++++.+. ++.+.+.+.. ++|+++
T Consensus 160 ~~-~~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~---~~~~~~~~~~-~~d~vi 233 (333)
T cd08296 160 GA-KPGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKADLARKLGAHHYIDTSKE---DVAEALQELG-GAKLIL 233 (333)
T ss_pred CC-CCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHcCCcEEecCCCc---cHHHHHHhcC-CCCEEE
Confidence 77 8999999999 6999999999999999999999999999999999999999998764 5666666553 799999
Q ss_pred eCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589 186 PGFTDP-VYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 186 D~vG~~-~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
|++|.. . ++.++++++++|+++.+|
T Consensus 234 ~~~g~~~~---~~~~~~~l~~~G~~v~~g 259 (333)
T cd08296 234 ATAPNAKA---ISALVGGLAPRGKLLILG 259 (333)
T ss_pred ECCCchHH---HHHHHHHcccCCEEEEEe
Confidence 998754 6 889999999999999998
No 65
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=99.65 E-value=7e-15 Score=158.32 Aligned_cols=178 Identities=16% Similarity=0.026 Sum_probs=129.9
Q ss_pred cccccccchhHhhhhhhHHHhCCCCCCCCCCcccccccccccCCcE---EeecC----CCCCCCCHHhHhhhhhHHHHHH
Q psy14589 26 KLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFS---LRPVA----GLLSSRDFLAGLAFRVFHSTQY 98 (655)
Q Consensus 26 ~~l~~~aC~~~~~G~~~l~~~~~y~~~~iP~le~V~~~l~~~~g~~---~~~v~----~l~~~~s~~eAAal~~a~~TA~ 98 (655)
+.+....|..|..+..++|.+..+-. .-++. .+. ...++|+ .++.. .++++++..++++++++++|||
T Consensus 92 ~~~~~~~c~~~~~~~~~~c~~~~~~~-~~~~~-~~~---~~~g~~a~~~~v~~~~~~~~lP~~~~~~~aa~~~~~~~ta~ 166 (361)
T cd08231 92 VGAPCGRCYRCLVGDPTKCENRKKYG-HEASC-DDP---HLSGGYAEHIYLPPGTAIVRVPDNVPDEVAAPANCALATVL 166 (361)
T ss_pred ccCCCCCChhHhCcCccccccchhcc-ccccc-cCC---CCCcccceEEEecCCCceEECCCCCCHHHHHHhcCHHHHHH
Confidence 33446678888888777776543310 00000 000 0112232 33321 2345677888888889999999
Q ss_pred HHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhc
Q psy14589 99 IRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSY 177 (655)
Q Consensus 99 ~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~ 177 (655)
+++.+.... ++|++|||+|+ |++|++++|+||++|+ +|+++++++++.+.++++|++.++++......++...+.+.
T Consensus 167 ~al~~~~~~-~~g~~vlI~g~-g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~ 244 (361)
T cd08231 167 AALDRAGPV-GAGDTVVVQGA-GPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADATIDIDELPDPQRRAIVRDI 244 (361)
T ss_pred HHHHhccCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCeEEcCcccccHHHHHHHHHH
Confidence 999877766 79999999985 9999999999999999 99999999999999999999999988753212233456665
Q ss_pred CC--CeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589 178 GS--ELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 178 ~~--gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
++ ++|+++|++|+. . +..++++++++|+++.+|
T Consensus 245 ~~~~~~d~vid~~g~~~~---~~~~~~~l~~~G~~v~~g 280 (361)
T cd08231 245 TGGRGADVVIEASGHPAA---VPEGLELLRRGGTYVLVG 280 (361)
T ss_pred hCCCCCcEEEECCCChHH---HHHHHHHhccCCEEEEEc
Confidence 43 799999999875 6 789999999999999987
No 66
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=99.65 E-value=2.8e-15 Score=160.86 Aligned_cols=126 Identities=17% Similarity=0.070 Sum_probs=109.0
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCC
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGA 156 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGA 156 (655)
+++++++++++.+ +++.|||+++ ....+ ++|++|+|+|+ |++|++++|+||++|+ +|+++++++++.+.++++|+
T Consensus 143 lP~~~~~~~aa~~-~~~~ta~~~l-~~~~~-~~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~ga 218 (351)
T cd08233 143 LPDNVPLEEAALV-EPLAVAWHAV-RRSGF-KPGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELAEELGA 218 (351)
T ss_pred CcCCCCHHHhhhc-cHHHHHHHHH-HhcCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCC
Confidence 4567778777654 7889999998 56777 89999999986 9999999999999999 89999999999999999999
Q ss_pred cEEEeCCccchhHHHHHHHhcCC--CeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589 157 DYVVDHTIRELDRFANQILSYGS--ELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 157 d~vId~~~~~~~d~~~~i~~~~~--gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
+.++|+.+. ++.+.+++.++ ++|+++|++|+. . ++.++++++++|+++.+|
T Consensus 219 ~~~i~~~~~---~~~~~l~~~~~~~~~d~vid~~g~~~~---~~~~~~~l~~~G~~v~~g 272 (351)
T cd08233 219 TIVLDPTEV---DVVAEVRKLTGGGGVDVSFDCAGVQAT---LDTAIDALRPRGTAVNVA 272 (351)
T ss_pred CEEECCCcc---CHHHHHHHHhCCCCCCEEEECCCCHHH---HHHHHHhccCCCEEEEEc
Confidence 999998864 57777776643 699999999865 6 889999999999999998
No 67
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=99.64 E-value=5.8e-15 Score=161.16 Aligned_cols=132 Identities=18% Similarity=0.088 Sum_probs=112.1
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcC--CCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCC
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSK--PLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLG 155 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~--~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LG 155 (655)
+++++++.+++++++++.|||+++... +.+ ++|++|+|+|++|++|++++|+||++|++|++++++++|++.++++|
T Consensus 160 iP~~l~~~~aa~l~~~~~tA~~al~~~~~~~~-~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~~~~G 238 (393)
T cd08246 160 KPKHLSWEEAAAYMLVGATAYRMLFGWNPNTV-KPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYCRALG 238 (393)
T ss_pred CCCCCCHHHHhhhcccHHHHHHHHhhcccccC-CCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHcC
Confidence 456788999999999999999998654 567 89999999999999999999999999999989999999999999999
Q ss_pred CcEEEeCCccc-------------------hhHHHHHHHhcCC---CeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589 156 ADYVVDHTIRE-------------------LDRFANQILSYGS---ELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 156 Ad~vId~~~~~-------------------~~d~~~~i~~~~~---gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
++.++|+++.+ ...+.+.+.+.++ ++|+++|++|+.. ++.++++++++|+++.+|
T Consensus 239 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~~---~~~~~~~l~~~G~~v~~g 315 (393)
T cd08246 239 AEGVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRAT---FPTSVFVCDRGGMVVICA 315 (393)
T ss_pred CCEEEcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchHh---HHHHHHHhccCCEEEEEc
Confidence 99999874320 0024455655543 6999999999877 889999999999999987
No 68
>cd04904 ACT_AAAH ACT domain of the nonheme iron-dependent, aromatic amino acid hydroxylases (AAAH). ACT domain of the nonheme iron-dependent, aromatic amino acid hydroxylases (AAAH): Phenylalanine hydroxylases (PAH), tyrosine hydroxylases (TH) and tryptophan hydroxylases (TPH), both peripheral (TPH1) and neuronal (TPH2) enzymes. This family of enzymes shares a common catalytic mechanism, in which dioxygen is used by an active site containing a single, reduced iron atom to hydroxylate an unactivated aromatic substrate, concomitant with a two-electron oxidation of tetrahydropterin (BH4) cofactor to its quinonoid dihydropterin form. PAH catalyzes the hydroxylation of L-Phe to L-Tyr, the first step in the catabolic degradation of L-Phe; TH catalyses the hydroxylation of L-Tyr to 3,4-dihydroxyphenylalanine, the rate limiting step in the biosynthesis of catecholamines; and TPH catalyses the hydroxylation of L-Trp to 5-hydroxytryptophan, the rate limiting step in the biosynthesis of 5-hydroxy
Probab=99.64 E-value=5.5e-16 Score=130.70 Aligned_cols=72 Identities=51% Similarity=0.797 Sum_probs=68.7
Q ss_pred EEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecC-CchHHHHHHHHHccCCcEEEe
Q psy14589 262 DFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAP-GGDLSSVIESLRSSCSYINII 334 (655)
Q Consensus 262 tsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg-~~~v~~~l~~L~~~~~~v~iL 334 (655)
+|++|++++ +||+|+++|+.|++++|||++|||||++..+|+|.|||||+| ++++++++++|++.+..++++
T Consensus 1 tsl~f~l~~-~pG~L~~vL~~f~~~~iNlt~IeSRP~~~~~~~y~Ffvd~~~~~~~~~~~l~~L~~~~~~~~~~ 73 (74)
T cd04904 1 TSLIFSLKE-EVGALARALKLFEEFGVNLTHIESRPSRRNGSEYEFFVDCEVDRGDLDQLISSLRRVVADVNIL 73 (74)
T ss_pred CEEEEEeCC-CCcHHHHHHHHHHHCCCcEEEEECCCCCCCCceEEEEEEEEcChHHHHHHHHHHHHhcCeEEEc
Confidence 588999988 899999999999999999999999999999999999999999 888999999999999999875
No 69
>PRK11898 prephenate dehydratase; Provisional
Probab=99.64 E-value=6.3e-16 Score=162.27 Aligned_cols=97 Identities=19% Similarity=0.181 Sum_probs=84.2
Q ss_pred hhheeeccccccccCCCCCCCCeEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecC---Cc
Q psy14589 239 FFYFLLLSQPLIQSCHSCPFSLFDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAP---GG 315 (655)
Q Consensus 239 ~~~F~ll~~p~~~~~~~~~~~~ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg---~~ 315 (655)
+|+|+++++..... .......|+|++|++++++||+|.++|+.|++++|||++|||||.+..+|+|.|||||+| ++
T Consensus 175 ~TRF~vi~~~~~~~-~~~~~~~ktslif~l~~~~pGsL~~~L~~F~~~~INLt~IeSRP~~~~~~~y~F~vd~eg~~~~~ 253 (283)
T PRK11898 175 RTRFWLLGRKKPPP-PLRTGGDKTSLVLTLPNNLPGALYKALSEFAWRGINLTRIESRPTKTGLGTYFFFIDVEGHIDDV 253 (283)
T ss_pred ceEEEEEEcCcccC-CCCCCCCeEEEEEEeCCCCccHHHHHHHHHHHCCCCeeeEecccCCCCCccEEEEEEEEccCCCH
Confidence 57899998753211 112334599999999885699999999999999999999999999999999999999999 55
Q ss_pred hHHHHHHHHHccCCcEEEecC
Q psy14589 316 DLSSVIESLRSSCSYINIISR 336 (655)
Q Consensus 316 ~v~~~l~~L~~~~~~v~iLGs 336 (655)
++++++++|++.|..+++||+
T Consensus 254 ~~~~al~~L~~~~~~~k~LGs 274 (283)
T PRK11898 254 LVAEALKELEALGEDVKVLGS 274 (283)
T ss_pred HHHHHHHHHHHhcCcEEEEEe
Confidence 899999999999999999999
No 70
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=99.63 E-value=5.6e-15 Score=159.10 Aligned_cols=167 Identities=18% Similarity=0.098 Sum_probs=115.5
Q ss_pred cccccchhHhhhhhhHHHhCCCCCCCCCCcccccccccccCCcEEeecC---CCCCCCCHHhHhhhhhHHHHHHHHhhc-
Q psy14589 28 YPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFSLRPVA---GLLSSRDFLAGLAFRVFHSTQYIRHPS- 103 (655)
Q Consensus 28 l~~~aC~~~~~G~~~l~~~~~y~~~~iP~le~V~~~l~~~~g~~~~~v~---~l~~~~s~~eAAal~~a~~TA~~aL~~- 103 (655)
.....|..|..|..++|+.+.+...++.+..+ ....+.+++.. .++++++ +++++.+++.++++++..
T Consensus 90 ~~cg~C~~c~~g~~~~c~~~~~~~~g~~~~~G------~~aey~~~~~~~~~~~P~~~~--~~a~~~~p~~~~~~a~~~~ 161 (355)
T cd08230 90 RPPGKCLNCRIGRPDFCETGEYTERGIKGLHG------FMREYFVDDPEYLVKVPPSLA--DVGVLLEPLSVVEKAIEQA 161 (355)
T ss_pred cCCCcChhhhCcCcccCCCcceeccCcCCCCc------cceeEEEeccccEEECCCCCC--cceeecchHHHHHHHHHHH
Confidence 44678999999987777665432111111101 01112222222 2334555 456666677666555422
Q ss_pred -----CCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEec---ChHHHHHHHhCCCcEEEeCCccchhHHHHHHH
Q psy14589 104 -----KPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVG---CPVGVAKAYGLGADYVVDHTIRELDRFANQIL 175 (655)
Q Consensus 104 -----~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~---s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~ 175 (655)
.... ++|++|+|.|+ |+||++++|+||++|++|+++++ +++|++.++++||+. +++.+. ++.+ .
T Consensus 162 ~~~~~~~~~-~~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~~~Ga~~-v~~~~~---~~~~-~- 233 (355)
T cd08230 162 EAVQKRLPT-WNPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVEELGATY-VNSSKT---PVAE-V- 233 (355)
T ss_pred hhhhhhccc-CCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEE-ecCCcc---chhh-h-
Confidence 2234 68999999997 99999999999999999999987 688999999999997 566553 3333 2
Q ss_pred hcCCCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589 176 SYGSELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 176 ~~~~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
+..+++|+|+|++|++ . +..++++++++|+++++|
T Consensus 234 ~~~~~~d~vid~~g~~~~---~~~~~~~l~~~G~~v~~G 269 (355)
T cd08230 234 KLVGEFDLIIEATGVPPL---AFEALPALAPNGVVILFG 269 (355)
T ss_pred hhcCCCCEEEECcCCHHH---HHHHHHHccCCcEEEEEe
Confidence 2234799999999986 5 889999999999999998
No 71
>KOG1196|consensus
Probab=99.62 E-value=5.5e-15 Score=151.87 Aligned_cols=124 Identities=13% Similarity=0.025 Sum_probs=112.7
Q ss_pred HhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hCCCcEEEeCC
Q psy14589 85 LAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GLGADYVVDHT 163 (655)
Q Consensus 85 ~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~LGAd~vId~~ 163 (655)
.-...+.++++|||.++.+.... ++|++|+|.||||+||+++.|+||.+|++|+++++|++|.+.++ ++|-|.++||+
T Consensus 129 ~ylg~lGm~glTAy~Gf~ei~~p-k~geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G~d~afNYK 207 (343)
T KOG1196|consen 129 YYLGLLGMPGLTAYAGFYEICSP-KKGETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYK 207 (343)
T ss_pred hhhhccCCchhHHHHHHHHhcCC-CCCCEEEEeeccchhHHHHHHHHHhcCCEEEEecCChhhhhhhHhccCCccceecc
Confidence 33567899999999999999998 99999999999999999999999999999999999999999986 57999999999
Q ss_pred ccchhHHHHHHHhcCC-CeeEEEeCCCcchHHHHHHHHHHhccccceEEEee
Q psy14589 164 IRELDRFANQILSYGS-ELDADHPGFTDPVYRARRKYFADLAFNYKHFFFFF 214 (655)
Q Consensus 164 ~~~~~d~~~~i~~~~~-gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~~ 214 (655)
+++ +..+++++... |+|+-+|.||+.. ++..+..|+..||+++-|.
T Consensus 208 ~e~--~~~~aL~r~~P~GIDiYfeNVGG~~---lDavl~nM~~~gri~~CG~ 254 (343)
T KOG1196|consen 208 EES--DLSAALKRCFPEGIDIYFENVGGKM---LDAVLLNMNLHGRIAVCGM 254 (343)
T ss_pred Ccc--CHHHHHHHhCCCcceEEEeccCcHH---HHHHHHhhhhccceEeeee
Confidence 863 67777777644 9999999999999 9999999999999999983
No 72
>KOG0022|consensus
Probab=99.62 E-value=3.6e-15 Score=154.12 Aligned_cols=229 Identities=14% Similarity=0.055 Sum_probs=171.1
Q ss_pred cccccchhHhhhhhhHHHhCCCCC--CCCC-----Cc----cccccccc--ccCCcEEeecC---CCCCCCCHHhHhhhh
Q psy14589 28 YPTHACKEHNHVFPLLIQNCGYAE--DNIP-----QL----EDISKFLK--DSTGFSLRPVA---GLLSSRDFLAGLAFR 91 (655)
Q Consensus 28 l~~~aC~~~~~G~~~l~~~~~y~~--~~iP-----~l----e~V~~~l~--~~~g~~~~~v~---~l~~~~s~~eAAal~ 91 (655)
-+...|..|..+..+||....... ...+ .+ +.+--++. ..+.|.+++.. .+.+..+.+.++-+.
T Consensus 95 p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~kId~~aPl~kvcLLg 174 (375)
T KOG0022|consen 95 PQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAKIDPSAPLEKVCLLG 174 (375)
T ss_pred cCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEecCCCCChhheeEee
Confidence 467899999999999998876642 1111 11 12222222 22335555433 345667788888899
Q ss_pred hHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCCcEEEeCCccchhHH
Q psy14589 92 VFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGADYVVDHTIRELDRF 170 (655)
Q Consensus 92 ~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~ 170 (655)
|..+|+|.|..+.+.+ ++|++|.|.|- |+||++++|-||++|| ++|++|.+++|.+.++++||++.||..+.. +..
T Consensus 175 CGvsTG~GAa~~~Akv-~~GstvAVfGL-G~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGaTe~iNp~d~~-~~i 251 (375)
T KOG0022|consen 175 CGVSTGYGAAWNTAKV-EPGSTVAVFGL-GGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEFGATEFINPKDLK-KPI 251 (375)
T ss_pred ccccccchhhhhhccc-CCCCEEEEEec-chHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhcCcceecChhhcc-ccH
Confidence 9999999999999999 99999999999 9999999999999999 999999999999999999999999987421 236
Q ss_pred HHHHHhcCC-CeeEEEeCCCcc-hHHHHHHHHHHhccc-cceEEEeeccchhhhhhhhhhhhhhhhhhhhhhhheeeccc
Q psy14589 171 ANQILSYGS-ELDADHPGFTDP-VYRARRKYFADLAFN-YKHFFFFFFFFFFFFFFFFFFYFFFFFFFFFYFFYFLLLSQ 247 (655)
Q Consensus 171 ~~~i~~~~~-gvDvV~D~vG~~-~~~~l~~~l~~l~~g-Grlv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~ll~~ 247 (655)
.+.+.+.++ |+|+-+||+|+. + +.+++.+.+.| |+-|++|. ..
T Consensus 252 ~evi~EmTdgGvDysfEc~G~~~~---m~~al~s~h~GwG~sv~iGv-------------------------------~~ 297 (375)
T KOG0022|consen 252 QEVIIEMTDGGVDYSFECIGNVST---MRAALESCHKGWGKSVVIGV-------------------------------AA 297 (375)
T ss_pred HHHHHHHhcCCceEEEEecCCHHH---HHHHHHHhhcCCCeEEEEEe-------------------------------cC
Confidence 677777775 999999999998 6 89999999999 99999983 11
Q ss_pred ccccc--CCCCCCCCe---EEEEEEccCCCcchHHHHHHHHHhCCcceeeeec
Q psy14589 248 PLIQS--CHSCPFSLF---DFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIES 295 (655)
Q Consensus 248 p~~~~--~~~~~~~~k---tsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeS 295 (655)
...+. .+....++| -+...-.+. ..++-++.+.+.++.+||...-|
T Consensus 298 ~~~~i~~~p~~l~~GR~~~Gs~FGG~K~--~~~iP~lV~~y~~~~l~ld~~IT 348 (375)
T KOG0022|consen 298 AGQEISTRPFQLVTGRTWKGSAFGGFKS--KSDIPKLVKDYMKKKLNLDEFIT 348 (375)
T ss_pred CCcccccchhhhccccEEEEEecccccc--hhhhhHHHHHHHhCccchhhhhh
Confidence 11111 122233443 333333444 34788999999999999976544
No 73
>PRK10622 pheA bifunctional chorismate mutase/prephenate dehydratase; Provisional
Probab=99.61 E-value=1.6e-15 Score=165.25 Aligned_cols=95 Identities=17% Similarity=0.298 Sum_probs=84.2
Q ss_pred hhheeeccccccccCCCCCCCCeEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecC---Cc
Q psy14589 239 FFYFLLLSQPLIQSCHSCPFSLFDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAP---GG 315 (655)
Q Consensus 239 ~~~F~ll~~p~~~~~~~~~~~~ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg---~~ 315 (655)
+|+|+++++.+... ......|||++|+++| +||+|.++|+.|+.+||||++|||||++..+|+|.||||++| ++
T Consensus 277 ~TRF~vi~~~~~~~--~~~~~~ktsl~~~~~~-~pGaL~~~L~~Fa~~giNLtkIeSRP~~~~~~~Y~Ffid~eg~~~d~ 353 (386)
T PRK10622 277 ITRFIVLARKAINV--SDQVPAKTTLLMATGQ-QAGALVEALLVLRNHNLIMTKLESRPIHGNPWEEMFYLDVQANLRSA 353 (386)
T ss_pred cceEEEEecCCCCC--CCCCCCcEEEEEEcCC-CCcHHHHHHHHHHHcCCCeeEEEeeecCCCCceEEEEEEEeCCCCCH
Confidence 68999999754211 1112259999999987 999999999999999999999999999999999999999999 67
Q ss_pred hHHHHHHHHHccCCcEEEecC
Q psy14589 316 DLSSVIESLRSSCSYINIISR 336 (655)
Q Consensus 316 ~v~~~l~~L~~~~~~v~iLGs 336 (655)
.++++|++|++.|..+|+||+
T Consensus 354 ~~~~aL~~l~~~~~~~kvLGs 374 (386)
T PRK10622 354 EMQKALKELGEITRSLKVLGC 374 (386)
T ss_pred HHHHHHHHHHHhcCcEEEeee
Confidence 899999999999999999999
No 74
>PLN02317 arogenate dehydratase
Probab=99.61 E-value=1.8e-15 Score=162.90 Aligned_cols=95 Identities=22% Similarity=0.368 Sum_probs=83.6
Q ss_pred hhheeeccccccccCCCCCCCCeEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCC--------------cc
Q psy14589 239 FFYFLLLSQPLIQSCHSCPFSLFDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIE--------------NN 304 (655)
Q Consensus 239 ~~~F~ll~~p~~~~~~~~~~~~ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~--------------~~ 304 (655)
.|+|+++++++.. .......|||++|++++ +||+|.++|+.|+.++|||++|||||.++.+ |+
T Consensus 263 ~TRFlvl~r~~~~--~~~~~~~KTSivfsl~~-~pG~L~k~L~~Fa~~~INLtkIESRP~~~~~~~~~~~~~~~~~~~~e 339 (382)
T PLN02317 263 VTRFLMLAREPII--PRTDRPFKTSIVFSLEE-GPGVLFKALAVFALRDINLTKIESRPQRKRPLRVVDDSNSGTAKYFD 339 (382)
T ss_pred eeeEEEEecCCcC--CCCCCCccEEEEEEcCC-CCchHHHHHHHHHHCCCCEEEEEeeecCCCCcccccccccccccccc
Confidence 6899999986421 11122348999999998 8999999999999999999999999999884 99
Q ss_pred eEEEEEecC---CchHHHHHHHHHccCCcEEEecC
Q psy14589 305 YEFMVECAP---GGDLSSVIESLRSSCSYINIISR 336 (655)
Q Consensus 305 Y~FfVd~eg---~~~v~~~l~~L~~~~~~v~iLGs 336 (655)
|.|||||++ +++++++|++|++.+..+++||+
T Consensus 340 Y~FyVD~eg~~~d~~~~~aL~~L~~~~~~lrvLGs 374 (382)
T PLN02317 340 YLFYVDFEASMADPRAQNALAHLQEFATFLRVLGS 374 (382)
T ss_pred EEEEEEEEcCcCCHHHHHHHHHHHHhcCeEEEEee
Confidence 999999999 67899999999999999999999
No 75
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.61 E-value=3.3e-14 Score=152.52 Aligned_cols=127 Identities=19% Similarity=0.053 Sum_probs=110.4
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCC
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGA 156 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGA 156 (655)
+++++++.+++++++++.|||+++ +...+ ++|++|+|+|+ |++|++++|+||++|+ .|+++++++++.+.++++|+
T Consensus 136 lP~~~~~~~aa~~~~~~~ta~~~~-~~~~~-~~g~~vlI~g~-g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~ 212 (351)
T cd08285 136 LPDGLTDEQAVMLPDMMSTGFHGA-ELANI-KLGDTVAVFGI-GPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGA 212 (351)
T ss_pred CCCCCCHHHhhhhccchhhHHHHH-HccCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCC
Confidence 456778999999999999999996 55677 89999999975 9999999999999999 58999899999999999999
Q ss_pred cEEEeCCccchhHHHHHHHhcC--CCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589 157 DYVVDHTIRELDRFANQILSYG--SELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 157 d~vId~~~~~~~d~~~~i~~~~--~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
+.++++... ++.+.+.+.. .++|+++|++|+. . +..++++++++|+++.+|
T Consensus 213 ~~~v~~~~~---~~~~~i~~~~~~~~~d~vld~~g~~~~---~~~~~~~l~~~G~~v~~g 266 (351)
T cd08285 213 TDIVDYKNG---DVVEQILKLTGGKGVDAVIIAGGGQDT---FEQALKVLKPGGTISNVN 266 (351)
T ss_pred ceEecCCCC---CHHHHHHHHhCCCCCcEEEECCCCHHH---HHHHHHHhhcCCEEEEec
Confidence 999998764 5666666553 3799999999975 5 799999999999999987
No 76
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=99.60 E-value=9.6e-15 Score=160.28 Aligned_cols=181 Identities=16% Similarity=0.099 Sum_probs=123.4
Q ss_pred ccccccccchhHhhhhhhHHHhCCCCCCC-CCCcccccccccccCCcEEeecC-----CCCCCCC----HHhHhhhhhHH
Q psy14589 25 TKLYPTHACKEHNHVFPLLIQNCGYAEDN-IPQLEDISKFLKDSTGFSLRPVA-----GLLSSRD----FLAGLAFRVFH 94 (655)
Q Consensus 25 ~~~l~~~aC~~~~~G~~~l~~~~~y~~~~-iP~le~V~~~l~~~~g~~~~~v~-----~l~~~~s----~~eAAal~~a~ 94 (655)
.+.+..+.|..|+.|..++|.+....... ..+.......-.....|.++|.. .++++.+ ..+++++.++.
T Consensus 92 ~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~l~~vP~~~~~~~~~~~~a~l~~~~ 171 (393)
T TIGR02819 92 PFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVPYADFNLLKFPDRDQALEKIRDLTMLSDIF 171 (393)
T ss_pred ecccCCCCChHHHCcCcccCcCCCCCCccceecccccCCCCCceEEEEEechhhCceEECCCcccccccccceeeeccHH
Confidence 35667889999999988888764321000 00000000000001112223321 1222232 24567888999
Q ss_pred HHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHH
Q psy14589 95 STQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLT-VFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQ 173 (655)
Q Consensus 95 ~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~-Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~ 173 (655)
.|+|+++.. ..+ ++|++|+|.|+ |+||++++|+||++|++ |++++++++|++.++++||+. +++... +++.+.
T Consensus 172 ~ta~~a~~~-~~~-~~g~~VlV~G~-G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a~~~Ga~~-v~~~~~--~~~~~~ 245 (393)
T TIGR02819 172 PTGYHGAVT-AGV-GPGSTVYIAGA-GPVGLAAAASAQLLGAAVVIVGDLNPARLAQARSFGCET-VDLSKD--ATLPEQ 245 (393)
T ss_pred HHHHHHHHh-cCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHcCCeE-EecCCc--ccHHHH
Confidence 999999854 667 89999999766 99999999999999997 455667788999999999985 554432 145556
Q ss_pred HHhcCC--CeeEEEeCCCcc---------------hHHHHHHHHHHhccccceEEEee
Q psy14589 174 ILSYGS--ELDADHPGFTDP---------------VYRARRKYFADLAFNYKHFFFFF 214 (655)
Q Consensus 174 i~~~~~--gvDvV~D~vG~~---------------~~~~l~~~l~~l~~gGrlv~v~~ 214 (655)
+.+.++ ++|+++|++|.+ + +++++++++++|+++.+|.
T Consensus 246 v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~G~i~~~G~ 300 (393)
T TIGR02819 246 IEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATV---LNSLMEVTRVGGAIGIPGL 300 (393)
T ss_pred HHHHcCCCCCcEEEECCCCccccccccccccchHHH---HHHHHHHhhCCCEEEEeee
Confidence 665543 799999999975 5 8999999999999999993
No 77
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=99.60 E-value=2.6e-14 Score=156.58 Aligned_cols=132 Identities=18% Similarity=0.081 Sum_probs=111.3
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhc--CCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCC
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPS--KPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLG 155 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~--~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LG 155 (655)
+++++++++++++++++.|||+++.. .+.+ ++|++|+|+|++|++|++++|+||++|++|+++++++++.+.++++|
T Consensus 156 vP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~-~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~~~~g 234 (398)
T TIGR01751 156 KPKHLTWEEAACPGLTGATAYRQLVGWNPATV-KPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYCRELG 234 (398)
T ss_pred CCCCCCHHHHhhccchHHHHHHHHhhhhccCC-CCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcC
Confidence 45678899999999999999999864 4667 79999999999999999999999999999988889999999999999
Q ss_pred CcEEEeCCccc-------------------hhHHHHHHHhcCC--CeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589 156 ADYVVDHTIRE-------------------LDRFANQILSYGS--ELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 156 Ad~vId~~~~~-------------------~~d~~~~i~~~~~--gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
++.++|+...+ ...+.+.+.+.++ ++|+++||+|+.. +..++++++++|+++.+|
T Consensus 235 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~~---~~~~~~~l~~~G~~v~~g 310 (398)
T TIGR01751 235 AEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRAT---FPTSVFVCRRGGMVVICG 310 (398)
T ss_pred CCEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHHH---HHHHHHhhccCCEEEEEc
Confidence 99999975420 0023344555543 7999999999777 889999999999999998
No 78
>KOG1202|consensus
Probab=99.59 E-value=3.5e-15 Score=171.39 Aligned_cols=167 Identities=19% Similarity=0.186 Sum_probs=138.8
Q ss_pred hhhHHHhCCCCCCCCCC-cccccc------cccccCCcEE---eecCC--------------CCCCCCHHhHhhhhhHHH
Q psy14589 40 FPLLIQNCGYAEDNIPQ-LEDISK------FLKDSTGFSL---RPVAG--------------LLSSRDFLAGLAFRVFHS 95 (655)
Q Consensus 40 ~~~l~~~~~y~~~~iP~-le~V~~------~l~~~~g~~~---~~v~~--------------l~~~~s~~eAAal~~a~~ 95 (655)
+|++-..++++++.||+ +..-+. -+....|.++ +|+.+ ++..++++||++.|+.++
T Consensus 1459 RDiMLasGkL~~DAiPG~~a~qdclLGmEFsGRd~~GrRvM~mvpAksLATt~l~~rd~lWevP~~WTleeAstVP~VYs 1538 (2376)
T KOG1202|consen 1459 RDIMLASGKLSPDAIPGDLASQDCLLGMEFSGRDASGRRVMGMVPAKSLATTVLASRDFLWEVPSKWTLEEASTVPVVYS 1538 (2376)
T ss_pred HHHHHhcCCCCcccCCCccchhhheeceeeccccCCCcEEEEeeehhhhhhhhhcchhhhhhCCcccchhhcccCceEee
Confidence 57788889999999998 321111 1223344443 33322 445789999999999999
Q ss_pred HHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh----CCCcEEEeCCccchhHHH
Q psy14589 96 TQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG----LGADYVVDHTIRELDRFA 171 (655)
Q Consensus 96 TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~----LGAd~vId~~~~~~~d~~ 171 (655)
|||++|..++.+ ++|+++|||++|||||++|+.+|-++|++|+.|++|.+|++++.+ |-..++-|.++. ++.
T Consensus 1539 TaYYALVvRG~m-kkGekiLIHaGsGGVGQAAIaiALa~G~~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRdt---sFE 1614 (2376)
T KOG1202|consen 1539 TAYYALVVRGQM-KKGEKILIHAGSGGVGQAAIAIALAHGCTVFTTVGSAEKREFLLKRFPQLQETNFANSRDT---SFE 1614 (2376)
T ss_pred eehhhhhhhccc-cCCcEEEEecCCCchhHHHHHHHHHcCCEEEEecCcHHHHHHHHHhchhhhhhcccccccc---cHH
Confidence 999999999999 999999999999999999999999999999999999999999863 677777777765 788
Q ss_pred HHHHhcCC--CeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589 172 NQILSYGS--ELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 172 ~~i~~~~~--gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
..+++.++ |+|+|+++...+. ++.+++||+.+||..-+|
T Consensus 1615 q~vl~~T~GrGVdlVLNSLaeEk---LQASiRCLa~~GRFLEIG 1655 (2376)
T KOG1202|consen 1615 QHVLWHTKGRGVDLVLNSLAEEK---LQASIRCLALHGRFLEIG 1655 (2376)
T ss_pred HHHHHHhcCCCeeeehhhhhHHH---HHHHHHHHHhcCeeeeec
Confidence 88988864 9999999998777 999999999999999997
No 79
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=99.58 E-value=7.5e-14 Score=148.78 Aligned_cols=127 Identities=15% Similarity=0.041 Sum_probs=110.2
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCC
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGA 156 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGA 156 (655)
++.+++..++++++++++|||+++ ....+ ++|++|+|.|+ |++|++++|+||++|+ +|+++++++++.+.++++|+
T Consensus 137 lP~~~~~~~aa~l~~~~~ta~~~~-~~~~~-~~~~~VlI~g~-g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~ 213 (347)
T cd05278 137 IPDGLPDEDALMLSDILPTGFHGA-ELAGI-KPGSTVAVIGA-GPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGA 213 (347)
T ss_pred CCCCCCHHHHhhhcchhhheeehh-hhcCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCC
Confidence 456788999999999999999998 56777 89999999765 9999999999999997 89899888889889999999
Q ss_pred cEEEeCCccchhHHHHHHHhcC--CCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589 157 DYVVDHTIRELDRFANQILSYG--SELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 157 d~vId~~~~~~~d~~~~i~~~~--~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
+.++++.+. ++.+.+++.. +++|+++|++|+. . +..++++++++|+++.+|
T Consensus 214 ~~vi~~~~~---~~~~~i~~~~~~~~~d~vld~~g~~~~---~~~~~~~l~~~G~~v~~g 267 (347)
T cd05278 214 TDIINPKNG---DIVEQILELTGGRGVDCVIEAVGFEET---FEQAVKVVRPGGTIANVG 267 (347)
T ss_pred cEEEcCCcc---hHHHHHHHHcCCCCCcEEEEccCCHHH---HHHHHHHhhcCCEEEEEc
Confidence 999998764 5666666553 3799999999984 6 899999999999999887
No 80
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=99.57 E-value=3.1e-14 Score=154.84 Aligned_cols=182 Identities=15% Similarity=0.039 Sum_probs=132.0
Q ss_pred cccccccchhHhhhhhhHHHhCCCCC-CCCCC--ccccc------ccccccCCcE---EeecC---CCCCCCCHHhHhhh
Q psy14589 26 KLYPTHACKEHNHVFPLLIQNCGYAE-DNIPQ--LEDIS------KFLKDSTGFS---LRPVA---GLLSSRDFLAGLAF 90 (655)
Q Consensus 26 ~~l~~~aC~~~~~G~~~l~~~~~y~~-~~iP~--le~V~------~~l~~~~g~~---~~~v~---~l~~~~s~~eAAal 90 (655)
+....+.|..|+.|.+++|+...+.. ..+.+ ..... .......+|+ .++.. .+++++++.+++++
T Consensus 92 ~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~~l~~~~aa~~ 171 (373)
T cd08299 92 FVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAAAPLEKVCLI 171 (373)
T ss_pred CCCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEecccceeeCCCCCChHHhhee
Confidence 34567889999999888887654311 00100 00000 0000112233 33332 24567889999999
Q ss_pred hhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCCcEEEeCCccchhH
Q psy14589 91 RVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGADYVVDHTIRELDR 169 (655)
Q Consensus 91 ~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d 169 (655)
++++.|||+++.+.+.+ ++|++|+|+|+ |++|++++|+|+++|+ +|+++++++++++.++++|+++++++.+.+ ++
T Consensus 172 ~~~~~ta~~~~~~~~~~-~~g~~VlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~lGa~~~i~~~~~~-~~ 248 (373)
T cd08299 172 GCGFSTGYGAAVNTAKV-TPGSTCAVFGL-GGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATECINPQDYK-KP 248 (373)
T ss_pred ccchHHHHHHHHhccCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEecccccc-hh
Confidence 99999999998777888 89999999976 9999999999999999 899999999999999999999999876421 12
Q ss_pred HHHHHHhcC-CCeeEEEeCCCcc-hHHHHHHHHHHh-ccccceEEEe
Q psy14589 170 FANQILSYG-SELDADHPGFTDP-VYRARRKYFADL-AFNYKHFFFF 213 (655)
Q Consensus 170 ~~~~i~~~~-~gvDvV~D~vG~~-~~~~l~~~l~~l-~~gGrlv~v~ 213 (655)
..+.+.+.+ +++|+++|++|++ . +..++..+ +++|+++.+|
T Consensus 249 ~~~~v~~~~~~~~d~vld~~g~~~~---~~~~~~~~~~~~G~~v~~g 292 (373)
T cd08299 249 IQEVLTEMTDGGVDFSFEVIGRLDT---MKAALASCHEGYGVSVIVG 292 (373)
T ss_pred HHHHHHHHhCCCCeEEEECCCCcHH---HHHHHHhhccCCCEEEEEc
Confidence 455555543 3799999999975 5 67777765 5799999998
No 81
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=99.56 E-value=3e-14 Score=151.17 Aligned_cols=127 Identities=15% Similarity=0.116 Sum_probs=108.5
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEE-cCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCC
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFII-GANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGA 156 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~-GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGA 156 (655)
+++++++.++|+++++++|||..+ +.... +|++++|+ |++|++|++++|+||++|++|++++++++|++.++++|+
T Consensus 113 iP~~~~~~~aa~~~~~~~ta~~~~-~~~~~--~~~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~~~g~ 189 (324)
T cd08291 113 LPDGVSFEQGASSFVNPLTALGML-ETARE--EGAKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLKKIGA 189 (324)
T ss_pred CCCCCCHHHHhhhcccHHHHHHHH-Hhhcc--CCCcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCC
Confidence 456788999999999999998654 44444 56667766 888999999999999999999999999999999999999
Q ss_pred cEEEeCCccchhHHHHHHHhcCC--CeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589 157 DYVVDHTIRELDRFANQILSYGS--ELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 157 d~vId~~~~~~~d~~~~i~~~~~--gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
++++|+.+. ++.+.+++.+. ++|+++|++|+.. ....+++++++|+++.+|
T Consensus 190 ~~~i~~~~~---~~~~~v~~~~~~~~~d~vid~~g~~~---~~~~~~~l~~~G~~v~~g 242 (324)
T cd08291 190 EYVLNSSDP---DFLEDLKELIAKLNATIFFDAVGGGL---TGQILLAMPYGSTLYVYG 242 (324)
T ss_pred cEEEECCCc---cHHHHHHHHhCCCCCcEEEECCCcHH---HHHHHHhhCCCCEEEEEE
Confidence 999998764 57777776643 7999999999887 788899999999999998
No 82
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=99.56 E-value=3.7e-14 Score=149.32 Aligned_cols=128 Identities=13% Similarity=0.032 Sum_probs=113.6
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD 157 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd 157 (655)
+++++++++++++++++.|||+++. .+.+ ++|++|+|+|++|++|++++|+||++|++|+++++++++.+.++++|++
T Consensus 109 ip~~~~~~~aa~~~~~~~ta~~~~~-~~~~-~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~ 186 (324)
T cd08292 109 LPDGISDEVAAQLIAMPLSALMLLD-FLGV-KPGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRALGIG 186 (324)
T ss_pred CCCCCCHHHhhhccccHHHHHHHHH-hhCC-CCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHhcCCC
Confidence 4567889999999999999999985 4677 8999999999999999999999999999999999999999999899999
Q ss_pred EEEeCCccchhHHHHHHHhcCC--CeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589 158 YVVDHTIRELDRFANQILSYGS--ELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 158 ~vId~~~~~~~d~~~~i~~~~~--gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
+++++.+. ++.+.+.+.+. ++|+|+|++|+.. ...++++++++|+++.+|
T Consensus 187 ~~~~~~~~---~~~~~i~~~~~~~~~d~v~d~~g~~~---~~~~~~~l~~~g~~v~~g 238 (324)
T cd08292 187 PVVSTEQP---GWQDKVREAAGGAPISVALDSVGGKL---AGELLSLLGEGGTLVSFG 238 (324)
T ss_pred EEEcCCCc---hHHHHHHHHhCCCCCcEEEECCCChh---HHHHHHhhcCCcEEEEEe
Confidence 99988764 56677776643 7999999999887 889999999999999987
No 83
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=99.56 E-value=2.1e-13 Score=146.19 Aligned_cols=126 Identities=12% Similarity=-0.006 Sum_probs=106.8
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecChHHHHHHHhCCC
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLT-VFASVGCPVGVAKAYGLGA 156 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~-Viat~~s~~k~~~a~~LGA 156 (655)
+++++++.+++++ .++.|+|+++ +...+ ++|++|+|.| +|++|++++|+||++|++ |++++++++|.+.+.++|+
T Consensus 145 lP~~~~~~~aa~~-~~~~ta~~a~-~~~~~-~~g~~vlI~g-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~ 220 (350)
T cd08256 145 VPDDIPPEDAILI-EPLACALHAV-DRANI-KFDDVVVLAG-AGPLGLGMIGAARLKNPKKLIVLDLKDERLALARKFGA 220 (350)
T ss_pred CCCCCCHHHHhhh-hHHHHHHHHH-HhcCC-CCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHHcCC
Confidence 4567788888887 8999999998 66777 8999999955 599999999999999985 6788888999998999999
Q ss_pred cEEEeCCccchhHHHHHHHhcCC--CeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589 157 DYVVDHTIRELDRFANQILSYGS--ELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 157 d~vId~~~~~~~d~~~~i~~~~~--gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
+.++++.+. ++.+.+.+.++ ++|+++|++|+. . +..++++++++|+++.++
T Consensus 221 ~~v~~~~~~---~~~~~~~~~~~~~~vdvvld~~g~~~~---~~~~~~~l~~~G~~v~~g 274 (350)
T cd08256 221 DVVLNPPEV---DVVEKIKELTGGYGCDIYIEATGHPSA---VEQGLNMIRKLGRFVEFS 274 (350)
T ss_pred cEEecCCCc---CHHHHHHHHhCCCCCCEEEECCCChHH---HHHHHHHhhcCCEEEEEc
Confidence 999987754 46666666543 799999999964 6 788999999999999987
No 84
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.56 E-value=5.9e-14 Score=146.71 Aligned_cols=128 Identities=23% Similarity=0.106 Sum_probs=113.1
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD 157 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd 157 (655)
+++++++.+++++++++.|||+++.....+ ++|++|+|+|++|++|++++|+||++|++|+++++++++.+.++++|++
T Consensus 111 ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~-~~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~ 189 (320)
T cd08243 111 IDSDLSWAELAALPETYYTAWGSLFRSLGL-QPGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALLKELGAD 189 (320)
T ss_pred CCCCCCHHHHHhcchHHHHHHHHHHHhcCC-CCCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCc
Confidence 456778899999999999999999887777 8999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCccchhHHHHHHHhcCCCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589 158 YVVDHTIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 158 ~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
++++... ++.+.+.+.++++|+++|++|+.. +..++++++++|+++.+|
T Consensus 190 ~~~~~~~----~~~~~i~~~~~~~d~vl~~~~~~~---~~~~~~~l~~~g~~v~~g 238 (320)
T cd08243 190 EVVIDDG----AIAEQLRAAPGGFDKVLELVGTAT---LKDSLRHLRPGGIVCMTG 238 (320)
T ss_pred EEEecCc----cHHHHHHHhCCCceEEEECCChHH---HHHHHHHhccCCEEEEEc
Confidence 9886432 455566655448999999999877 899999999999999987
No 85
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=99.56 E-value=1.4e-13 Score=150.18 Aligned_cols=124 Identities=22% Similarity=0.128 Sum_probs=104.1
Q ss_pred HhHhhhhhHHHHHHHHhhcC-CCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCCcEEEeC
Q psy14589 85 LAGLAFRVFHSTQYIRHPSK-PLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGADYVVDH 162 (655)
Q Consensus 85 ~eAAal~~a~~TA~~aL~~~-~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGAd~vId~ 162 (655)
.++|+++++++|||+++... +.+ ++|++|+|+|+ |++|++++|+||++|+ +|++++++++|.+.++++|+++++++
T Consensus 178 ~~~a~~~~~~~ta~~al~~~~~~~-~~g~~VlV~g~-g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~~~g~~~~v~~ 255 (384)
T cd08265 178 FEAGALVEPTSVAYNGLFIRGGGF-RPGAYVVVYGA-GPIGLAAIALAKAAGASKVIAFEISEERRNLAKEMGADYVFNP 255 (384)
T ss_pred HHHhhhhhHHHHHHHHHHhhcCCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcc
Confidence 44778889999999998655 677 89999999975 9999999999999999 79999998999999999999999987
Q ss_pred CccchhHHHHHHHhcCC--CeeEEEeCCCcc--hHHHHHHHHHHhccccceEEEe
Q psy14589 163 TIRELDRFANQILSYGS--ELDADHPGFTDP--VYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 163 ~~~~~~d~~~~i~~~~~--gvDvV~D~vG~~--~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
.+....++.+.+.+.+. ++|+|+|++|+. . +..++++++++||++.+|
T Consensus 256 ~~~~~~~~~~~v~~~~~g~gvDvvld~~g~~~~~---~~~~~~~l~~~G~~v~~g 307 (384)
T cd08265 256 TKMRDCLSGEKVMEVTKGWGADIQVEAAGAPPAT---IPQMEKSIAINGKIVYIG 307 (384)
T ss_pred cccccccHHHHHHHhcCCCCCCEEEECCCCcHHH---HHHHHHHHHcCCEEEEEC
Confidence 64211145566666543 799999999974 5 789999999999999987
No 86
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=99.55 E-value=1.2e-13 Score=146.75 Aligned_cols=128 Identities=16% Similarity=0.042 Sum_probs=108.3
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHH-cCCeEEEEecChHHHHHHHhCCC
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKA-YGLTVFASVGCPVGVAKAYGLGA 156 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~-~Ga~Viat~~s~~k~~~a~~LGA 156 (655)
+++++++.+++++++++.|||+++ ..+.+ ++|++|+|+|+ |++|++++|+||+ +|++|+++++++++++.++++|+
T Consensus 132 ~p~~~~~~~aa~l~~~~~ta~~~~-~~~~~-~~g~~vlV~g~-g~vG~~~~~la~~~~g~~v~~~~~~~~~~~~~~~~g~ 208 (338)
T PRK09422 132 VPEGLDPAQASSITCAGVTTYKAI-KVSGI-KPGQWIAIYGA-GGLGNLALQYAKNVFNAKVIAVDINDDKLALAKEVGA 208 (338)
T ss_pred CCCCCCHHHeehhhcchhHHHHHH-HhcCC-CCCCEEEEECC-cHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHHcCC
Confidence 456788999999999999999998 56677 89999999995 9999999999998 49999999999999999999999
Q ss_pred cEEEeCCccchhHHHHHHHhcCCCee-EEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589 157 DYVVDHTIRELDRFANQILSYGSELD-ADHPGFTDPVYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 157 d~vId~~~~~~~d~~~~i~~~~~gvD-vV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
+.++++... +++.+.+++..+++| +++++.++.. ++.++++++++|+++.+|
T Consensus 209 ~~v~~~~~~--~~~~~~v~~~~~~~d~vi~~~~~~~~---~~~~~~~l~~~G~~v~~g 261 (338)
T PRK09422 209 DLTINSKRV--EDVAKIIQEKTGGAHAAVVTAVAKAA---FNQAVDAVRAGGRVVAVG 261 (338)
T ss_pred cEEeccccc--ccHHHHHHHhcCCCcEEEEeCCCHHH---HHHHHHhccCCCEEEEEe
Confidence 999997541 145666766655788 4555555556 899999999999999987
No 87
>cd04930 ACT_TH ACT domain of the nonheme iron-dependent aromatic amino acid hydroxylase, tyrosine hydroxylases (TH). ACT domain of the nonheme iron-dependent aromatic amino acid hydroxylase, tyrosine hydroxylases (TH). TH catalyses the hydroxylation of L-Tyr to 3,4-dihydroxyphenylalanine, the rate limiting step in the biosynthesis of catecholamines (dopamine, noradrenaline and adrenaline), functioning as hormones and neurotransmitters. The enzyme is not regulated by its amino acid substrate, but instead by phosphorylation at several serine residues located N-terminal of the ACT domain, and by feedback inhibition by catecholamines at the active site. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=99.55 E-value=1.4e-14 Score=132.19 Aligned_cols=74 Identities=27% Similarity=0.464 Sum_probs=69.4
Q ss_pred CeEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecC-CchHHHHHHHHHccCCcEEEe
Q psy14589 260 LFDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAP-GGDLSSVIESLRSSCSYINII 334 (655)
Q Consensus 260 ~ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg-~~~v~~~l~~L~~~~~~v~iL 334 (655)
+|+|++|++++ +||+|+++|+.|+.++|||++|||||++..+|+|.|||||+| ...+.+++++|++.+..+++.
T Consensus 40 ~ktSlifsl~~-~pGsL~~iL~~Fa~~gINLt~IESRP~~~~~~eY~FfIdieg~~~~~~~aL~~L~~~~~~~kv~ 114 (115)
T cd04930 40 QKATLLFSLKE-GFSSLSRILKVFETFEAKIHHLESRPSRKEGGDLEVLVRCEVHRSDLLQLISSLRQVAEDVRLT 114 (115)
T ss_pred ccEEEEEEeCC-CCcHHHHHHHHHHHCCCCEEEEECCcCCCCCceEEEEEEEEeCHHHHHHHHHHHHHhcCeeEec
Confidence 48999999998 899999999999999999999999999999999999999999 557999999999999988764
No 88
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=99.55 E-value=7.2e-14 Score=148.24 Aligned_cols=128 Identities=22% Similarity=0.189 Sum_probs=111.2
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCC-----CCEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecChHHHHHH
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPE-----PDTLFIIGANRGNGLAAIQVGKAY-GLTVFASVGCPVGVAKA 151 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~-----Gd~VLI~GasGgVG~~avQlAk~~-Ga~Viat~~s~~k~~~a 151 (655)
++++++++++|++++++.|||+++.....+ ++ |++|+|+|++|++|++++|+||++ |++|+++++++++.+.+
T Consensus 112 ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~-~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l 190 (336)
T TIGR02817 112 KPKSLSFAEAAALPLTSITAWELLFDRLGI-NDPVAGDKRALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWV 190 (336)
T ss_pred CCCCCCHHHHhhhhHHHHHHHHHHHHhcCC-CCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHH
Confidence 556789999999999999999998777777 65 999999999999999999999998 99999999999999999
Q ss_pred HhCCCcEEEeCCccchhHHHHHHHhcCC-CeeEEEeCCCc-chHHHHHHHHHHhccccceEEEe
Q psy14589 152 YGLGADYVVDHTIRELDRFANQILSYGS-ELDADHPGFTD-PVYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 152 ~~LGAd~vId~~~~~~~d~~~~i~~~~~-gvDvV~D~vG~-~~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
+++|+++++++.. ++.+.+.+.++ ++|+++|++|+ .. ...++++++++|+++.++
T Consensus 191 ~~~g~~~~~~~~~----~~~~~i~~~~~~~vd~vl~~~~~~~~---~~~~~~~l~~~G~~v~~~ 247 (336)
T TIGR02817 191 LELGAHHVIDHSK----PLKAQLEKLGLEAVSYVFSLTHTDQH---FKEIVELLAPQGRFALID 247 (336)
T ss_pred HHcCCCEEEECCC----CHHHHHHHhcCCCCCEEEEcCCcHHH---HHHHHHHhccCCEEEEEc
Confidence 9999999998754 35555655543 79999999865 46 789999999999999864
No 89
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=99.54 E-value=2e-13 Score=144.38 Aligned_cols=128 Identities=19% Similarity=0.076 Sum_probs=109.8
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD 157 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd 157 (655)
++++++..+++++++++.|||+++.....+ ++|++|+|.|+ |++|++++|+|+.+|++|+++++++++.+.++++|++
T Consensus 134 lp~~~~~~~a~~~~~~~~ta~~~l~~~~~~-~~~~~vli~g~-g~vG~~~~~la~~~G~~V~~~~~s~~~~~~~~~~g~~ 211 (338)
T cd08254 134 VPDGVPFAQAAVATDAVLTPYHAVVRAGEV-KPGETVLVIGL-GGLGLNAVQIAKAMGAAVIAVDIKEEKLELAKELGAD 211 (338)
T ss_pred CCCCCCHHHhhhhcchHHHHHHHHHhccCC-CCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCC
Confidence 456778999999999999999999888888 89999999765 9999999999999999999999999999999999999
Q ss_pred EEEeCCccchhHHHHHHHhc-CCCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589 158 YVVDHTIRELDRFANQILSY-GSELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 158 ~vId~~~~~~~d~~~~i~~~-~~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
.++++.+. +..+.+... .+++|+++|++|.. . ++.++++++++|+++.++
T Consensus 212 ~~~~~~~~---~~~~~~~~~~~~~~D~vid~~g~~~~---~~~~~~~l~~~G~~v~~g 263 (338)
T cd08254 212 EVLNSLDD---SPKDKKAAGLGGGFDVIFDFVGTQPT---FEDAQKAVKPGGRIVVVG 263 (338)
T ss_pred EEEcCCCc---CHHHHHHHhcCCCceEEEECCCCHHH---HHHHHHHhhcCCEEEEEC
Confidence 99987653 333434222 23799999999865 6 889999999999999987
No 90
>cd04929 ACT_TPH ACT domain of the nonheme iron-dependent aromatic amino acid hydroxylase, tryptophan hydroxylases (TPH), both peripheral (TPH1) and neuronal (TPH2) enzymes. ACT domain of the nonheme iron-dependent aromatic amino acid hydroxylase, tryptophan hydroxylases (TPH), both peripheral (TPH1) and neuronal (TPH2) enzymes. TPH catalyses the hydroxylation of L-Trp to 5-hydroxytryptophan, the rate limiting step in the biosynthesis of 5-hydroxytryptamine (serotonin) and the first reaction in the synthesis of melatonin. Very little is known about the role of the ACT domain in TPH, which appears to be regulated by phosphorylation but not by its substrate or cofactor. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=99.54 E-value=1.2e-14 Score=122.49 Aligned_cols=69 Identities=39% Similarity=0.653 Sum_probs=64.1
Q ss_pred EEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecC-CchHHHHHHHHHccCCcE
Q psy14589 262 DFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAP-GGDLSSVIESLRSSCSYI 331 (655)
Q Consensus 262 tsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg-~~~v~~~l~~L~~~~~~v 331 (655)
++++|++++ +||+|+++|+.|++++|||++|||||++..+|+|.|||||+| ..++++++++|++.+...
T Consensus 1 tsl~~~l~~-~~g~L~~iL~~f~~~~inl~~IeSRP~~~~~~~y~F~id~e~~~~~i~~~l~~l~~~~~~~ 70 (74)
T cd04929 1 TSVIFSLKN-EVGGLAKALKLFQELGINVVHIESRKSKRRSSEFEIFVDCECDQRRLDELVQLLKREVASV 70 (74)
T ss_pred CEEEEEcCC-CCcHHHHHHHHHHHCCCCEEEEEeccCCCCCceEEEEEEEEcCHHHHHHHHHHHHHhcccc
Confidence 478999988 899999999999999999999999999999999999999999 669999999999877643
No 91
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=99.53 E-value=1.6e-13 Score=147.14 Aligned_cols=128 Identities=22% Similarity=0.110 Sum_probs=110.3
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCC
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGA 156 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGA 156 (655)
+++++++.+++++++++.|||+++...... ++|++|+|+|+ |++|++++|+||++|+ +|+++++++++.+.++++|+
T Consensus 144 ~p~~~s~~~aa~l~~~~~tA~~~~~~~~~~-~~~~~vlI~g~-g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~ 221 (350)
T cd08240 144 DPGGLDPALAATLACSGLTAYSAVKKLMPL-VADEPVVIIGA-GGLGLMALALLKALGPANIIVVDIDEAKLEAAKAAGA 221 (350)
T ss_pred CCCCCCHHHeehhhchhhhHHHHHHhcccC-CCCCEEEEECC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCC
Confidence 456778999999999999999999877766 78999999975 9999999999999999 78899899999999999999
Q ss_pred cEEEeCCccchhHHHHHHHhcCC-CeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589 157 DYVVDHTIRELDRFANQILSYGS-ELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 157 d~vId~~~~~~~d~~~~i~~~~~-gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
+.++++.+. ++.+.+.+..+ ++|+++|++|+. . ++.++++|+++|+++.++
T Consensus 222 ~~~~~~~~~---~~~~~~~~~~~~~~d~vid~~g~~~~---~~~~~~~l~~~g~~v~~g 274 (350)
T cd08240 222 DVVVNGSDP---DAAKRIIKAAGGGVDAVIDFVNNSAT---ASLAFDILAKGGKLVLVG 274 (350)
T ss_pred cEEecCCCc---cHHHHHHHHhCCCCcEEEECCCCHHH---HHHHHHHhhcCCeEEEEC
Confidence 999987653 45555555433 799999999864 6 899999999999999887
No 92
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=99.53 E-value=1.7e-13 Score=149.74 Aligned_cols=131 Identities=15% Similarity=0.002 Sum_probs=110.0
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCC
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGA 156 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGA 156 (655)
+++++++.++++++++++|||+++ ..+.+ ++|++|+|+|+ |++|++++|+||++|+ +|+++++++++.+.++++++
T Consensus 154 lp~~~~~~~aa~l~~~~~ta~~~l-~~~~~-~~g~~VlV~g~-G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~~~ 230 (386)
T cd08283 154 IPDDLSDEKALFLSDILPTGYHAA-ELAEV-KPGDTVAVWGC-GPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLG 230 (386)
T ss_pred CCCCCCHHHHhhhccchhhhHHHH-hhccC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCC
Confidence 556789999999999999999998 67777 89999999976 9999999999999998 59999999999999999855
Q ss_pred cEEEeCCccchhHHHHHHHhcCC--CeeEEEeCCCcc-------------------hHHHHHHHHHHhccccceEEEe
Q psy14589 157 DYVVDHTIRELDRFANQILSYGS--ELDADHPGFTDP-------------------VYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 157 d~vId~~~~~~~d~~~~i~~~~~--gvDvV~D~vG~~-------------------~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
..++++... +++.+.+.+.+. ++|+|+|++|++ ....++.++++++++|+++.++
T Consensus 231 ~~vi~~~~~--~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~g 306 (386)
T cd08283 231 AETINFEEV--DDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSIIG 306 (386)
T ss_pred cEEEcCCcc--hHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCEEEEEc
Confidence 578887653 136677766643 799999999863 1123788999999999999987
No 93
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=99.52 E-value=2e-13 Score=147.91 Aligned_cols=128 Identities=17% Similarity=0.016 Sum_probs=111.9
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCC
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGA 156 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGA 156 (655)
+++++++.+++++++++.||+.++...+.+ ++|++|+|+|+ |++|++++|+||++|+ +|++++++++|.+.++++|+
T Consensus 155 iP~~~s~~~a~~l~~~~~ta~~~~~~~~~~-~~g~~vlI~g~-g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~~g~ 232 (365)
T cd08278 155 VDKDVPLELLAPLGCGIQTGAGAVLNVLKP-RPGSSIAVFGA-GAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGA 232 (365)
T ss_pred CCCCCCHHHhhhhcchhhhhhHHHhhhcCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCC
Confidence 456788999999999999999998877888 89999999976 9999999999999999 68999999999999999999
Q ss_pred cEEEeCCccchhHHHHHHHhcC-CCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589 157 DYVVDHTIRELDRFANQILSYG-SELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 157 d~vId~~~~~~~d~~~~i~~~~-~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
+.++++... ++.+.+.+.+ .++|+++|++|+. . +..++++++++|+++.+|
T Consensus 233 ~~~i~~~~~---~~~~~v~~~~~~~~d~vld~~g~~~~---~~~~~~~l~~~G~~v~~g 285 (365)
T cd08278 233 THVINPKEE---DLVAAIREITGGGVDYALDTTGVPAV---IEQAVDALAPRGTLALVG 285 (365)
T ss_pred cEEecCCCc---CHHHHHHHHhCCCCcEEEECCCCcHH---HHHHHHHhccCCEEEEeC
Confidence 999998764 4555555443 4899999999875 5 789999999999999987
No 94
>cd04931 ACT_PAH ACT domain of the nonheme iron-dependent aromatic amino acid hydroxylase, phenylalanine hydroxylases (PAH). ACT domain of the nonheme iron-dependent aromatic amino acid hydroxylase, phenylalanine hydroxylases (PAH). PAH catalyzes the hydroxylation of L-Phe to L-Tyr, the first step in the catabolic degradation of L-Phe. In PAH, an autoregulatory sequence, N-terminal of the ACT domain, extends across the catalytic domain active site and regulates the enzyme by intrasteric regulation. It appears that the activation by L-Phe induces a conformational change that converts the enzyme to a high-affinity and high-activity state. Modulation of activity is achieved through inhibition by BH4 and activation by phosphorylation of serine residues of the autoregulatory region. The molecular basis for the cooperative activation process is not fully understood yet. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=99.52 E-value=3.3e-14 Score=124.25 Aligned_cols=69 Identities=42% Similarity=0.614 Sum_probs=64.3
Q ss_pred CCCeEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecC--CchHHHHHHHHHcc
Q psy14589 258 FSLFDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAP--GGDLSSVIESLRSS 327 (655)
Q Consensus 258 ~~~ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg--~~~v~~~l~~L~~~ 327 (655)
..++++++|++++ +||+|+++|+.|++++|||++|||||++...|+|.|||||+| ++.+++++++|++.
T Consensus 11 ~~~ktslif~l~~-~pGsL~~vL~~Fa~~~INLt~IeSRP~~~~~~~Y~FfVDieg~~~~~~~~~l~~L~~~ 81 (90)
T cd04931 11 KNGVISLIFSLKE-EVGALAKVLRLFEEKDINLTHIESRPSRLNKDEYEFFINLDKKSAPALDPIIKSLRND 81 (90)
T ss_pred CCCcEEEEEEcCC-CCcHHHHHHHHHHHCCCCEEEEEeccCCCCCceEEEEEEEEcCCCHHHHHHHHHHHHH
Confidence 3458999999998 899999999999999999999999999999999999999999 77899999999873
No 95
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=99.52 E-value=1.4e-13 Score=144.79 Aligned_cols=129 Identities=16% Similarity=0.081 Sum_probs=114.4
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD 157 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd 157 (655)
+++++++.+++++++++.|||+++...+.+ .+|++|+|+|++|++|++++|+||++|++|+++++++++.+.++++|++
T Consensus 107 lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~-~~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~ 185 (323)
T cd05282 107 VPDSISDEQAAMLYINPLTAWLMLTEYLKL-PPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEELKALGAD 185 (323)
T ss_pred CCCCCCHHHHHHHhccHHHHHHHHHHhccC-CCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHHHhcCCC
Confidence 456778889999999999999998877777 8999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCccchhHHHHHHHhcC--CCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589 158 YVVDHTIRELDRFANQILSYG--SELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 158 ~vId~~~~~~~d~~~~i~~~~--~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
.++++... ++.+.+.+.+ .++|+++|++|+.. ...++++++++|+++.+|
T Consensus 186 ~~~~~~~~---~~~~~~~~~~~~~~~d~vl~~~g~~~---~~~~~~~l~~~g~~v~~g 237 (323)
T cd05282 186 EVIDSSPE---DLAQRVKEATGGAGARLALDAVGGES---ATRLARSLRPGGTLVNYG 237 (323)
T ss_pred EEecccch---hHHHHHHHHhcCCCceEEEECCCCHH---HHHHHHhhCCCCEEEEEc
Confidence 99998753 4666666654 37999999999887 778899999999999987
No 96
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=99.52 E-value=1.9e-13 Score=145.11 Aligned_cols=124 Identities=20% Similarity=0.212 Sum_probs=108.3
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD 157 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd 157 (655)
+++++++.+++.++++..|||+++... .+ ++|++|+|+|++|++|++++|+||++|++|+++++++++.+.++++ ++
T Consensus 132 lp~~~~~~~~a~l~~~~~~a~~~~~~~-~~-~~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~~~~-~~ 208 (334)
T PRK13771 132 VPPNVSDEGAVIVPCVTGMVYRGLRRA-GV-KKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIVSKY-AD 208 (334)
T ss_pred CCCCCCHHHhhcccchHHHHHHHHHhc-CC-CCCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH-HH
Confidence 456778899999999999999998766 77 8999999999999999999999999999999999999999999888 88
Q ss_pred EEEeCCccchhHHHHHHHhcCCCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589 158 YVVDHTIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 158 ~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
.++++. ++.+.+++.+ ++|+++|++|+.. ...++++++++|+++.+|
T Consensus 209 ~~~~~~-----~~~~~v~~~~-~~d~~ld~~g~~~---~~~~~~~l~~~G~~v~~g 255 (334)
T PRK13771 209 YVIVGS-----KFSEEVKKIG-GADIVIETVGTPT---LEESLRSLNMGGKIIQIG 255 (334)
T ss_pred HhcCch-----hHHHHHHhcC-CCcEEEEcCChHH---HHHHHHHHhcCCEEEEEe
Confidence 887754 2344455543 7999999999887 899999999999999998
No 97
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=99.52 E-value=2.1e-13 Score=144.37 Aligned_cols=129 Identities=17% Similarity=0.085 Sum_probs=115.0
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD 157 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd 157 (655)
+++++++++++++++++.|||+++.+.+.+ ++|++|+|+|++|++|++++|+||++|++|+++++++++++.++++|++
T Consensus 109 lp~~~~~~~~~~~~~~~~ta~~~l~~~~~~-~~g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~~~~~~g~~ 187 (327)
T PRK10754 109 LPDAISFEQAAASFLKGLTVYYLLRKTYEI-KPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRAKKAGAW 187 (327)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhhcCC-CCCCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCC
Confidence 456788999999999999999998877888 8999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCccchhHHHHHHHhcCC--CeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589 158 YVVDHTIRELDRFANQILSYGS--ELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 158 ~vId~~~~~~~d~~~~i~~~~~--gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
.+++.... ++.+.+++.++ ++|+++|++|+.. ...++++++++|+++.+|
T Consensus 188 ~~~~~~~~---~~~~~~~~~~~~~~~d~vl~~~~~~~---~~~~~~~l~~~g~~v~~g 239 (327)
T PRK10754 188 QVINYREE---NIVERVKEITGGKKVRVVYDSVGKDT---WEASLDCLQRRGLMVSFG 239 (327)
T ss_pred EEEcCCCC---cHHHHHHHHcCCCCeEEEEECCcHHH---HHHHHHHhccCCEEEEEc
Confidence 99987654 56666666543 7999999999877 888999999999999997
No 98
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=99.52 E-value=1.7e-13 Score=145.73 Aligned_cols=127 Identities=20% Similarity=0.098 Sum_probs=109.7
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcC-CCCCCCCCEEEEEcCCCchHHHHHHHHHHcC-CeEEEEecChHHHHHHHhCC
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSK-PLYTPEPDTLFIIGANRGNGLAAIQVGKAYG-LTVFASVGCPVGVAKAYGLG 155 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~-~~l~~~Gd~VLI~GasGgVG~~avQlAk~~G-a~Viat~~s~~k~~~a~~LG 155 (655)
+++++++++++++++++.|||+++... ..+ .+|++|+|+|+ |++|++++|+||++| ++|+++++++++.+.++++|
T Consensus 135 ~P~~ls~~~aa~l~~~~~ta~~~l~~~~~~~-~~~~~vlI~g~-~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g 212 (340)
T cd05284 135 LPRGLDPVEAAPLADAGLTAYHAVKKALPYL-DPGSTVVVIGV-GGLGHIAVQILRALTPATVIAVDRSEEALKLAERLG 212 (340)
T ss_pred CCCCCCHHHhhhhcchHHHHHHHHHHhcccC-CCCCEEEEEcC-cHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHhC
Confidence 456778999999999999999998765 456 78999999996 779999999999999 79999999999999999999
Q ss_pred CcEEEeCCccchhHHHHHHHhcC--CCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589 156 ADYVVDHTIRELDRFANQILSYG--SELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 156 Ad~vId~~~~~~~d~~~~i~~~~--~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
+++++++.. ++.+.+.+.. .++|+++|++|+. . .+.++++++++|+++.++
T Consensus 213 ~~~~~~~~~----~~~~~i~~~~~~~~~dvvld~~g~~~~---~~~~~~~l~~~g~~i~~g 266 (340)
T cd05284 213 ADHVLNASD----DVVEEVRELTGGRGADAVIDFVGSDET---LALAAKLLAKGGRYVIVG 266 (340)
T ss_pred CcEEEcCCc----cHHHHHHHHhCCCCCCEEEEcCCCHHH---HHHHHHHhhcCCEEEEEc
Confidence 999998775 3555666553 2799999999974 6 789999999999999987
No 99
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=99.51 E-value=1.5e-13 Score=144.91 Aligned_cols=129 Identities=16% Similarity=0.094 Sum_probs=108.6
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcC--CCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCC
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSK--PLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLG 155 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~--~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LG 155 (655)
+++++++.+++++++++.|||+++... ......|++|+|+|++|++|++++|+||++|++|+++++++++.+.++++|
T Consensus 112 ~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g 191 (326)
T cd08289 112 LPKGLTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYLKKLG 191 (326)
T ss_pred CCCCCCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHHHHcC
Confidence 456788999999999999999887432 222145889999999999999999999999999999999999999999999
Q ss_pred CcEEEeCCccchhHHHHHHHhcC-CCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589 156 ADYVVDHTIRELDRFANQILSYG-SELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 156 Ad~vId~~~~~~~d~~~~i~~~~-~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
++.++++.+. ..+.+.+.+ +++|+++|++|+.. ++.++++++++|+++.+|
T Consensus 192 ~~~v~~~~~~----~~~~~~~~~~~~~d~vld~~g~~~---~~~~~~~l~~~G~~i~~g 243 (326)
T cd08289 192 AKEVIPREEL----QEESIKPLEKQRWAGAVDPVGGKT---LAYLLSTLQYGGSVAVSG 243 (326)
T ss_pred CCEEEcchhH----HHHHHHhhccCCcCEEEECCcHHH---HHHHHHHhhcCCEEEEEe
Confidence 9999987642 233344443 37999999999877 899999999999999998
No 100
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=99.51 E-value=2.4e-13 Score=144.87 Aligned_cols=126 Identities=18% Similarity=0.102 Sum_probs=107.3
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCC
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGA 156 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGA 156 (655)
+++++++++++++++++.|||+++.. ..+ ++|++|+|+|+ |++|++++|+||++|+ +|++++++++|.+.++++|+
T Consensus 137 ~p~~l~~~~a~~l~~~~~ta~~~~~~-~~~-~~~~~vlI~g~-g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~ 213 (344)
T cd08284 137 LPDGLSDEAALLLGDILPTGYFGAKR-AQV-RPGDTVAVIGC-GPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGA 213 (344)
T ss_pred CCCCCCHHHhhhhcCchHHHHhhhHh-cCC-ccCCEEEEECC-cHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCC
Confidence 45678899999999999999999865 667 89999999975 9999999999999997 89999888899999999998
Q ss_pred cEEEeCCccchhHHHHHHHhcC--CCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589 157 DYVVDHTIRELDRFANQILSYG--SELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 157 d~vId~~~~~~~d~~~~i~~~~--~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
+ ++++... ++.+.+.+.. +++|+++|++|+. . +..++++++++|++|.+|
T Consensus 214 ~-~~~~~~~---~~~~~l~~~~~~~~~dvvid~~~~~~~---~~~~~~~l~~~g~~v~~g 266 (344)
T cd08284 214 E-PINFEDA---EPVERVREATEGRGADVVLEAVGGAAA---LDLAFDLVRPGGVISSVG 266 (344)
T ss_pred e-EEecCCc---CHHHHHHHHhCCCCCCEEEECCCCHHH---HHHHHHhcccCCEEEEEC
Confidence 6 4666543 4666666653 3799999999975 6 889999999999999987
No 101
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.51 E-value=4e-13 Score=143.33 Aligned_cols=126 Identities=21% Similarity=0.135 Sum_probs=105.9
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD 157 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd 157 (655)
+++++++.+++++++++.|||+++ ....+ ++|++|+|+|++|++|++++|+||++|++|++++.++ +++.++++|++
T Consensus 147 ip~~~~~~~~a~l~~~~~ta~~~~-~~~~~-~~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~-~~~~~~~~g~~ 223 (350)
T cd08274 147 VNSPLSDVELATFPCSYSTAENML-ERAGV-GAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA-KEEAVRALGAD 223 (350)
T ss_pred CCCCCCHHHHHhcccHHHHHHHHH-hhcCC-CCCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCch-hhHHHHhcCCe
Confidence 456778999999999999999998 56677 8999999999999999999999999999999888665 88888999998
Q ss_pred EEEeCCccchhHHHHHHHhc-CCCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589 158 YVVDHTIRELDRFANQILSY-GSELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 158 ~vId~~~~~~~d~~~~i~~~-~~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
.+++.... ...+ .... ..++|+++|++|+.. ++.++++++++|+++.+|
T Consensus 224 ~~~~~~~~---~~~~-~~~~~~~~~d~vi~~~g~~~---~~~~~~~l~~~G~~v~~g 273 (350)
T cd08274 224 TVILRDAP---LLAD-AKALGGEPVDVVADVVGGPL---FPDLLRLLRPGGRYVTAG 273 (350)
T ss_pred EEEeCCCc---cHHH-HHhhCCCCCcEEEecCCHHH---HHHHHHHhccCCEEEEec
Confidence 77665442 2223 2222 238999999999877 899999999999999987
No 102
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=99.51 E-value=1.8e-13 Score=146.14 Aligned_cols=128 Identities=19% Similarity=0.139 Sum_probs=112.3
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD 157 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd 157 (655)
++++++.++++++++++.|||+++.+.+.+ .+|++|+|+| +|++|++++|+||++|++|+++++++++.+.++++|++
T Consensus 134 iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~-~~~~~vlV~g-~g~vg~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~g~~ 211 (345)
T cd08260 134 LPDDVDFVTAAGLGCRFATAFRALVHQARV-KPGEWVAVHG-CGGVGLSAVMIASALGARVIAVDIDDDKLELARELGAV 211 (345)
T ss_pred CCCCCCHHHhhhhccchHHHHHHHHHccCC-CCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHhCCC
Confidence 456778889999999999999998777777 8999999999 59999999999999999999999999999999999999
Q ss_pred EEEeCCc-cchhHHHHHHHhcCC-CeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589 158 YVVDHTI-RELDRFANQILSYGS-ELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 158 ~vId~~~-~~~~d~~~~i~~~~~-gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
.+++++. . ++.+.+.+.+. ++|+++|++|+. . ...++++++++|+++.+|
T Consensus 212 ~~i~~~~~~---~~~~~~~~~~~~~~d~vi~~~g~~~~---~~~~~~~l~~~g~~i~~g 264 (345)
T cd08260 212 ATVNASEVE---DVAAAVRDLTGGGAHVSVDALGIPET---CRNSVASLRKRGRHVQVG 264 (345)
T ss_pred EEEccccch---hHHHHHHHHhCCCCCEEEEcCCCHHH---HHHHHHHhhcCCEEEEeC
Confidence 9999875 3 56666665543 799999999964 6 789999999999999987
No 103
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.51 E-value=6.1e-14 Score=129.08 Aligned_cols=86 Identities=27% Similarity=0.210 Sum_probs=80.3
Q ss_pred chHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCC--CeeEEEeCCCc-chHHHHHH
Q psy14589 122 GNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGS--ELDADHPGFTD-PVYRARRK 198 (655)
Q Consensus 122 gVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~--gvDvV~D~vG~-~~~~~l~~ 198 (655)
|||++++|+||++|++|++++++++|++.++++||++++|+++. ++.+.+++.++ ++|+||||+|+ +. ++.
T Consensus 1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~~~Ga~~~~~~~~~---~~~~~i~~~~~~~~~d~vid~~g~~~~---~~~ 74 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAKELGADHVIDYSDD---DFVEQIRELTGGRGVDVVIDCVGSGDT---LQE 74 (130)
T ss_dssp HHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTTESEEEETTTS---SHHHHHHHHTTTSSEEEEEESSSSHHH---HHH
T ss_pred ChHHHHHHHHHHcCCEEEEEECCHHHHHHHHhhccccccccccc---ccccccccccccccceEEEEecCcHHH---HHH
Confidence 69999999999999999999999999999999999999999885 68889998865 79999999994 47 999
Q ss_pred HHHHhccccceEEEe
Q psy14589 199 YFADLAFNYKHFFFF 213 (655)
Q Consensus 199 ~l~~l~~gGrlv~v~ 213 (655)
++++++++|+++++|
T Consensus 75 ~~~~l~~~G~~v~vg 89 (130)
T PF00107_consen 75 AIKLLRPGGRIVVVG 89 (130)
T ss_dssp HHHHEEEEEEEEEES
T ss_pred HHHHhccCCEEEEEE
Confidence 999999999999998
No 104
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=99.51 E-value=7e-13 Score=141.29 Aligned_cols=128 Identities=20% Similarity=0.065 Sum_probs=112.2
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD 157 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd 157 (655)
+++++++.+++++++.+.|||+++... .+ ++|++|+|+|++|++|++++|+||++|++|+++++++++.+.++++|++
T Consensus 135 lp~~~~~~~~a~l~~~~~ta~~~~~~~-~~-~~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~ 212 (341)
T cd08297 135 IPDGLSFEQAAPLLCAGVTVYKALKKA-GL-KPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELAKELGAD 212 (341)
T ss_pred CCCCCCHHHHHHHHcchHHHHHHHHhc-CC-CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCc
Confidence 456788999999999999999998664 67 8999999999988899999999999999999999999999999999999
Q ss_pred EEEeCCccchhHHHHHHHhcC--CCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589 158 YVVDHTIRELDRFANQILSYG--SELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 158 ~vId~~~~~~~d~~~~i~~~~--~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
.++++.+. ++.+.+.+.+ +++|+++|+.++. . ++.++++++++|+++.+|
T Consensus 213 ~v~~~~~~---~~~~~~~~~~~~~~vd~vl~~~~~~~~---~~~~~~~l~~~g~~v~~g 265 (341)
T cd08297 213 AFVDFKKS---DDVEAVKELTGGGGAHAVVVTAVSAAA---YEQALDYLRPGGTLVCVG 265 (341)
T ss_pred EEEcCCCc---cHHHHHHHHhcCCCCCEEEEcCCchHH---HHHHHHHhhcCCEEEEec
Confidence 99998764 5666676654 3899999977654 6 889999999999999987
No 105
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=99.50 E-value=3.7e-13 Score=141.99 Aligned_cols=130 Identities=15% Similarity=0.093 Sum_probs=114.0
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD 157 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd 157 (655)
++++.+..+++++++++.|||+++.+.+.+ ++|++|+|+|++|++|++++|+||++|++++++++++++.+.++++|++
T Consensus 109 ip~~~~~~~a~~~~~~~~ta~~~l~~~~~~-~~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~ 187 (334)
T PTZ00354 109 IPQGYTFEEAAAIPEAFLTAWQLLKKHGDV-KKGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFCKKLAAI 187 (334)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCc
Confidence 456778889999999999999998877777 8999999999999999999999999999988898999999999999999
Q ss_pred EEEeCCccchhHHHHHHHhcC--CCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589 158 YVVDHTIRELDRFANQILSYG--SELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 158 ~vId~~~~~~~d~~~~i~~~~--~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
.++++... +++.+.+.+.+ .++|+++|++|+.. +..++++++++|+++.++
T Consensus 188 ~~~~~~~~--~~~~~~~~~~~~~~~~d~~i~~~~~~~---~~~~~~~l~~~g~~i~~~ 240 (334)
T PTZ00354 188 ILIRYPDE--EGFAPKVKKLTGEKGVNLVLDCVGGSY---LSETAEVLAVDGKWIVYG 240 (334)
T ss_pred EEEecCCh--hHHHHHHHHHhCCCCceEEEECCchHH---HHHHHHHhccCCeEEEEe
Confidence 99987653 12566666654 37999999999877 889999999999999987
No 106
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=99.50 E-value=3.6e-13 Score=145.90 Aligned_cols=130 Identities=15% Similarity=0.033 Sum_probs=110.2
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecChHHHHHHHhCCC
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLT-VFASVGCPVGVAKAYGLGA 156 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~-Viat~~s~~k~~~a~~LGA 156 (655)
+++++++++++++++++.|||+++.+.+.+ ++|++|+|+|+ |++|++++|+||++|++ |++++++++|.+.++++|+
T Consensus 152 lP~~~~~~~a~~~~~~~~ta~~al~~~~~~-~~g~~vlI~g~-g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~ 229 (365)
T cd05279 152 IDPDAPLEKVCLIGCGFSTGYGAAVNTAKV-TPGSTCAVFGL-GGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGA 229 (365)
T ss_pred CCCCCCHHHhhHhccchhHHHHHHHhccCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCC
Confidence 456778899999999999999998888888 89999999975 99999999999999995 7788889999999999999
Q ss_pred cEEEeCCccchhHHHHHHHhcC-CCeeEEEeCCCc-chHHHHHHHHHHhc-cccceEEEe
Q psy14589 157 DYVVDHTIRELDRFANQILSYG-SELDADHPGFTD-PVYRARRKYFADLA-FNYKHFFFF 213 (655)
Q Consensus 157 d~vId~~~~~~~d~~~~i~~~~-~gvDvV~D~vG~-~~~~~l~~~l~~l~-~gGrlv~v~ 213 (655)
++++++.+.+ .++.+.+++.+ +++|+++|++|. .. +..++++++ ++|+++.+|
T Consensus 230 ~~~v~~~~~~-~~~~~~l~~~~~~~~d~vid~~g~~~~---~~~~~~~l~~~~G~~v~~g 285 (365)
T cd05279 230 TECINPRDQD-KPIVEVLTEMTDGGVDYAFEVIGSADT---LKQALDATRLGGGTSVVVG 285 (365)
T ss_pred Ceeccccccc-chHHHHHHHHhCCCCcEEEECCCCHHH---HHHHHHHhccCCCEEEEEe
Confidence 9999876531 13445555543 489999999986 46 889999999 999999987
No 107
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=99.50 E-value=3.3e-13 Score=142.61 Aligned_cols=129 Identities=16% Similarity=0.065 Sum_probs=110.7
Q ss_pred CCCCCC--HHhHhh-hhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh-
Q psy14589 78 LLSSRD--FLAGLA-FRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG- 153 (655)
Q Consensus 78 l~~~~s--~~eAAa-l~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~- 153 (655)
++++++ +.++++ +++++.|||+++.+.+.+ .+|++|+|+|++|++|++++|+||++|++|+++++++++.+.+++
T Consensus 111 lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~-~~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~ 189 (329)
T cd05288 111 LDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKP-KPGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEE 189 (329)
T ss_pred CCcccCCCHHHHHHhcccHHHHHHHHHHhccCC-CCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhh
Confidence 344553 445555 999999999999877777 899999999999999999999999999999999999999999988
Q ss_pred CCCcEEEeCCccchhHHHHHHHhcC-CCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589 154 LGADYVVDHTIRELDRFANQILSYG-SELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 154 LGAd~vId~~~~~~~d~~~~i~~~~-~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
+|+++++++.+. ++.+.+.+.. +++|+++|++|+.. ++.++++++++|+++.+|
T Consensus 190 ~g~~~~~~~~~~---~~~~~v~~~~~~~~d~vi~~~g~~~---~~~~~~~l~~~G~~v~~g 244 (329)
T cd05288 190 LGFDAAINYKTP---DLAEALKEAAPDGIDVYFDNVGGEI---LDAALTLLNKGGRIALCG 244 (329)
T ss_pred cCCceEEecCCh---hHHHHHHHhccCCceEEEEcchHHH---HHHHHHhcCCCceEEEEe
Confidence 999999998764 4666666554 47999999999877 899999999999999987
No 108
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=99.50 E-value=2.7e-13 Score=146.57 Aligned_cols=128 Identities=21% Similarity=0.154 Sum_probs=113.0
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecChHHHHHHHhCCC
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLT-VFASVGCPVGVAKAYGLGA 156 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~-Viat~~s~~k~~~a~~LGA 156 (655)
+++++++.+++++++++.|||+++...+.+ ++|++|+|+| +|++|++++|+||++|++ |+++++++++.+.++++|+
T Consensus 156 ~P~~is~~~aa~l~~~~~tA~~~l~~~~~~-~~g~~VlI~g-~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~~g~ 233 (367)
T cd08263 156 LPESLDYTESAVLGCAGFTAYGALKHAADV-RPGETVAVIG-VGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGA 233 (367)
T ss_pred CCCCCCHHHHhHhcchHHHHHHHHHhcccC-CCCCEEEEEC-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCC
Confidence 556788999999999999999999887777 8999999996 599999999999999997 9989899999999999999
Q ss_pred cEEEeCCccchhHHHHHHHhcC--CCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589 157 DYVVDHTIRELDRFANQILSYG--SELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 157 d~vId~~~~~~~d~~~~i~~~~--~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
+.++++... ++.+.+++.. .++|+++|++|+. . ...++++++++|+++.++
T Consensus 234 ~~v~~~~~~---~~~~~l~~~~~~~~~d~vld~vg~~~~---~~~~~~~l~~~G~~v~~g 287 (367)
T cd08263 234 THTVNAAKE---DAVAAIREITGGRGVDVVVEALGKPET---FKLALDVVRDGGRAVVVG 287 (367)
T ss_pred ceEecCCcc---cHHHHHHHHhCCCCCCEEEEeCCCHHH---HHHHHHHHhcCCEEEEEc
Confidence 999998764 5666666553 3799999999987 6 889999999999999987
No 109
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=99.49 E-value=3.7e-13 Score=145.43 Aligned_cols=181 Identities=15% Similarity=0.061 Sum_probs=133.2
Q ss_pred ccccccccchhHhhhhhhHHHhCCCC-----CCCCCCcc--ccccc-ccccCCcE---Eeec---CCCCCCCCHHhHhhh
Q psy14589 25 TKLYPTHACKEHNHVFPLLIQNCGYA-----EDNIPQLE--DISKF-LKDSTGFS---LRPV---AGLLSSRDFLAGLAF 90 (655)
Q Consensus 25 ~~~l~~~aC~~~~~G~~~l~~~~~y~-----~~~iP~le--~V~~~-l~~~~g~~---~~~v---~~l~~~~s~~eAAal 90 (655)
.++.+.+.|..|+.+++.+|+.+-+. .+.+.+.- +.... .....+|+ .++. ..+++++++++++++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~~ 163 (363)
T cd08279 84 SWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPLDRAALL 163 (363)
T ss_pred CCCCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEeccccEEECCCCCChHHeehh
Confidence 34556788899999988777654210 00000000 00000 00112232 2221 234567788999999
Q ss_pred hhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecChHHHHHHHhCCCcEEEeCCccchhH
Q psy14589 91 RVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLT-VFASVGCPVGVAKAYGLGADYVVDHTIRELDR 169 (655)
Q Consensus 91 ~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~-Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d 169 (655)
+++..|||+++.....+ ++|++|+|+|+ |++|++++|+||++|++ |+++++++++.+.++++|+++++++... +
T Consensus 164 ~~~~~ta~~~~~~~~~~-~~g~~vLI~g~-g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g~~~vv~~~~~---~ 238 (363)
T cd08279 164 GCGVTTGVGAVVNTARV-RPGDTVAVIGC-GGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNASED---D 238 (363)
T ss_pred cchhHHHHHHHHhccCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhCCeEEeCCCCc---c
Confidence 99999999998877888 89999999965 99999999999999996 9999999999999999999999988764 5
Q ss_pred HHHHHHhcC--CCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589 170 FANQILSYG--SELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 170 ~~~~i~~~~--~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
+...+.+.. .++|+++|++|+. . +..++++++++|+++.++
T Consensus 239 ~~~~l~~~~~~~~vd~vld~~~~~~~---~~~~~~~l~~~G~~v~~g 282 (363)
T cd08279 239 AVEAVRDLTDGRGADYAFEAVGRAAT---IRQALAMTRKGGTAVVVG 282 (363)
T ss_pred HHHHHHHHcCCCCCCEEEEcCCChHH---HHHHHHHhhcCCeEEEEe
Confidence 666666654 3799999999954 5 789999999999999987
No 110
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=99.49 E-value=2.4e-13 Score=143.72 Aligned_cols=162 Identities=18% Similarity=0.136 Sum_probs=121.8
Q ss_pred cccccccchhHhhhhhhHHHhCCCCCCCCCCcccccccccccCCcE---Eee---cCCCCCCCCHHhHhhhhhHHHHHHH
Q psy14589 26 KLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFS---LRP---VAGLLSSRDFLAGLAFRVFHSTQYI 99 (655)
Q Consensus 26 ~~l~~~aC~~~~~G~~~l~~~~~y~~~~iP~le~V~~~l~~~~g~~---~~~---v~~l~~~~s~~eAAal~~a~~TA~~ 99 (655)
+.+++..|..|..|...+|+...+ +++. ...+|. .++ +..++++++++++++++++..|||+
T Consensus 86 ~~~~~~~c~~~~~~~~~~~~~~~~-----~~~~-------~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~ 153 (325)
T cd08264 86 NRVFDGTCDMCLSGNEMLCRNGGI-----IGVV-------SNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYH 153 (325)
T ss_pred CCcCCCCChhhcCCCccccCccce-----eecc-------CCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHHHHH
Confidence 344567788888887666654332 1110 111222 222 1234567889999999999999999
Q ss_pred HhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCC
Q psy14589 100 RHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGS 179 (655)
Q Consensus 100 aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~ 179 (655)
++.. ..+ ++|++|+|+|++|++|++++|+||++|++|+++++ .+.++++|+++++++.+ ..+.+++.++
T Consensus 154 ~l~~-~~~-~~g~~vlI~g~~g~vg~~~~~~a~~~G~~v~~~~~----~~~~~~~g~~~~~~~~~-----~~~~l~~~~~ 222 (325)
T cd08264 154 ALKT-AGL-GPGETVVVFGASGNTGIFAVQLAKMMGAEVIAVSR----KDWLKEFGADEVVDYDE-----VEEKVKEITK 222 (325)
T ss_pred HHHh-cCC-CCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeH----HHHHHHhCCCeeecchH-----HHHHHHHHhC
Confidence 9865 777 89999999999999999999999999999988863 36678899999998653 2333443335
Q ss_pred CeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589 180 ELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 180 gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
++|+|+|++|+.. +..++++++++|+++.++
T Consensus 223 ~~d~vl~~~g~~~---~~~~~~~l~~~g~~v~~g 253 (325)
T cd08264 223 MADVVINSLGSSF---WDLSLSVLGRGGRLVTFG 253 (325)
T ss_pred CCCEEEECCCHHH---HHHHHHhhccCCEEEEEe
Confidence 7999999999877 899999999999999987
No 111
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.49 E-value=3.1e-13 Score=144.60 Aligned_cols=129 Identities=19% Similarity=0.063 Sum_probs=107.4
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecChHHHHHHHhCCC
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLT-VFASVGCPVGVAKAYGLGA 156 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~-Viat~~s~~k~~~a~~LGA 156 (655)
+++++++.+++.+ +++.||++++ ..+.+ ++|++|+|.|+ |++|++++|+||++|++ |+++++++++.+.++++|+
T Consensus 133 lP~~~~~~~aa~~-~~~~~a~~~~-~~~~~-~~g~~vlI~g~-g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~ 208 (343)
T cd05285 133 LPDNVSLEEGALV-EPLSVGVHAC-RRAGV-RPGDTVLVFGA-GPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGA 208 (343)
T ss_pred CcCCCCHHHhhhh-hHHHHHHHHH-HhcCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCC
Confidence 4567788888766 6889999997 67788 89999999876 99999999999999997 8999889999999999999
Q ss_pred cEEEeCCccchhHHHHHHHhcCC--CeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589 157 DYVVDHTIRELDRFANQILSYGS--ELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 157 d~vId~~~~~~~d~~~~i~~~~~--gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
+.++++.+...+++.+.+.+.++ ++|+++|++|+. . +..++++++++|+++.++
T Consensus 209 ~~vi~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~---~~~~~~~l~~~G~~v~~g 265 (343)
T cd05285 209 THTVNVRTEDTPESAEKIAELLGGKGPDVVIECTGAESC---IQTAIYATRPGGTVVLVG 265 (343)
T ss_pred cEEeccccccchhHHHHHHHHhCCCCCCEEEECCCCHHH---HHHHHHHhhcCCEEEEEc
Confidence 99999876411113556665533 699999999986 6 889999999999999887
No 112
>KOG0025|consensus
Probab=99.49 E-value=8.7e-13 Score=135.10 Aligned_cols=124 Identities=17% Similarity=0.131 Sum_probs=105.1
Q ss_pred CCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCC
Q psy14589 81 SRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGA 156 (655)
Q Consensus 81 ~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGA 156 (655)
..+.+.||++...++|||.+|.+..++ .+||+|.-+||+++||.+.+|+||++|.+.|.++|+....+.+ +.+||
T Consensus 132 ~~pl~~AAT~~VNP~TAyrmL~dfv~L-~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA 210 (354)
T KOG0025|consen 132 DIPLASAATLSVNPCTAYRMLKDFVQL-NKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGA 210 (354)
T ss_pred cCChhhhheeccCchHHHHHHHHHHhc-CCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCC
Confidence 467999999999999999999999999 9999999999999999999999999999999999987655544 67999
Q ss_pred cEEEeCCccchhHHH-HHHHhc---CCCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589 157 DYVVDHTIRELDRFA-NQILSY---GSELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 157 d~vId~~~~~~~d~~-~~i~~~---~~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
|+||...+ +. ....+. ..++.+.++||||.. .....+.|.+||.+|.+|
T Consensus 211 ~~ViTeee-----l~~~~~~k~~~~~~~prLalNcVGGks---a~~iar~L~~GgtmvTYG 263 (354)
T KOG0025|consen 211 TEVITEEE-----LRDRKMKKFKGDNPRPRLALNCVGGKS---ATEIARYLERGGTMVTYG 263 (354)
T ss_pred ceEecHHH-----hcchhhhhhhccCCCceEEEeccCchh---HHHHHHHHhcCceEEEec
Confidence 99996432 21 111111 237899999999998 788899999999999998
No 113
>PRK10083 putative oxidoreductase; Provisional
Probab=99.49 E-value=1.8e-13 Score=145.67 Aligned_cols=126 Identities=15% Similarity=0.087 Sum_probs=102.9
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHH-cCCe-EEEEecChHHHHHHHhCC
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKA-YGLT-VFASVGCPVGVAKAYGLG 155 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~-~Ga~-Viat~~s~~k~~~a~~LG 155 (655)
+++++++.++ ++.+++.|+|++. +...+ ++|++|+|+| +|++|++++|+||+ +|++ |++++++++|.+.++++|
T Consensus 131 ip~~~~~~~a-~~~~~~~~a~~~~-~~~~~-~~g~~vlI~g-~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~G 206 (339)
T PRK10083 131 IPDAIADQYA-VMVEPFTIAANVT-GRTGP-TEQDVALIYG-AGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESG 206 (339)
T ss_pred CcCCCCHHHH-hhhchHHHHHHHH-HhcCC-CCCCEEEEEC-CCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhC
Confidence 4566777665 4678888888644 56677 8999999999 49999999999997 6995 777888899999999999
Q ss_pred CcEEEeCCccchhHHHHHHHhcCCCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589 156 ADYVVDHTIRELDRFANQILSYGSELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 156 Ad~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
++.++|+.+. ++.+.+...+.++|+++|++|++ . +..++++++++|+++.+|
T Consensus 207 a~~~i~~~~~---~~~~~~~~~g~~~d~vid~~g~~~~---~~~~~~~l~~~G~~v~~g 259 (339)
T PRK10083 207 ADWVINNAQE---PLGEALEEKGIKPTLIIDAACHPSI---LEEAVTLASPAARIVLMG 259 (339)
T ss_pred CcEEecCccc---cHHHHHhcCCCCCCEEEECCCCHHH---HHHHHHHhhcCCEEEEEc
Confidence 9999998763 45555544333568999999965 6 899999999999999998
No 114
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=99.48 E-value=3.7e-13 Score=143.24 Aligned_cols=132 Identities=17% Similarity=0.010 Sum_probs=111.4
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh----HHHHHHHh
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCP----VGVAKAYG 153 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~----~k~~~a~~ 153 (655)
++++++++++++++++..|||+++...+.+ ++|++|+|+|++|++|++++|+|+++|++|+++++++ ++.+.+++
T Consensus 115 lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~-~~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~ 193 (341)
T cd08290 115 VPNDVDPEQAATLSVNPCTAYRLLEDFVKL-QPGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLKA 193 (341)
T ss_pred CCCCCCHHHHHHhhccHHHHHHHHHhhccc-CCCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHHHh
Confidence 456788999999999999999999777777 8999999999999999999999999999998888775 66788899
Q ss_pred CCCcEEEeCCccchhHHHHHHHhcCC-CeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589 154 LGADYVVDHTIRELDRFANQILSYGS-ELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 154 LGAd~vId~~~~~~~d~~~~i~~~~~-gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
+|+++++++......++.+.+...++ ++|+++|++|+.. ...++++++++|+++.++
T Consensus 194 ~g~~~~~~~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~---~~~~~~~l~~~G~~v~~g 251 (341)
T cd08290 194 LGADHVLTEEELRSLLATELLKSAPGGRPKLALNCVGGKS---ATELARLLSPGGTMVTYG 251 (341)
T ss_pred cCCCEEEeCcccccccHHHHHHHHcCCCceEEEECcCcHh---HHHHHHHhCCCCEEEEEe
Confidence 99999998765200034555555443 7999999999887 778999999999999987
No 115
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=99.48 E-value=1.3e-12 Score=137.71 Aligned_cols=125 Identities=23% Similarity=0.247 Sum_probs=108.9
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD 157 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd 157 (655)
+++++++++++++++++.|||+++.. ..+ ++|++|+|+|++|++|++++++++.+|++|+++++++++.+.++++|++
T Consensus 132 ip~~~~~~~~~~~~~~~~ta~~~l~~-~~~-~~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~ 209 (332)
T cd08259 132 LPDNVSDESAALAACVVGTAVHALKR-AGV-KKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILKELGAD 209 (332)
T ss_pred CCCCCCHHHHhhhccHHHHHHHHHHH-hCC-CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHcCCc
Confidence 45677889999999999999999877 777 8999999999999999999999999999999999999998889999998
Q ss_pred EEEeCCccchhHHHHHHHhcCCCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589 158 YVVDHTIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 158 ~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
.+++.. ++.+.+.+.+ ++|++++++|+.. ...++++++++|+++.++
T Consensus 210 ~~~~~~-----~~~~~~~~~~-~~d~v~~~~g~~~---~~~~~~~~~~~g~~v~~g 256 (332)
T cd08259 210 YVIDGS-----KFSEDVKKLG-GADVVIELVGSPT---IEESLRSLNKGGRLVLIG 256 (332)
T ss_pred EEEecH-----HHHHHHHhcc-CCCEEEECCChHH---HHHHHHHhhcCCEEEEEc
Confidence 888653 2344454444 7999999999887 889999999999999987
No 116
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=99.48 E-value=3.4e-13 Score=144.91 Aligned_cols=121 Identities=11% Similarity=-0.037 Sum_probs=94.8
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcC--CCCCCCCCEEEEEcCCCchHHHHHHHHHH-cC-CeEEEEecChHHHHHHHh
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSK--PLYTPEPDTLFIIGANRGNGLAAIQVGKA-YG-LTVFASVGCPVGVAKAYG 153 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~--~~l~~~Gd~VLI~GasGgVG~~avQlAk~-~G-a~Viat~~s~~k~~~a~~ 153 (655)
+++++++++ |++.++.+|+|+++... ..+ ++||+|+|.|+ |+||++++|+||+ +| ++|++++++++|++.+++
T Consensus 131 vP~~l~~~~-aa~~~~~~~a~~a~~~~~~~~~-~~g~~VlV~G~-G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~ 207 (341)
T cd08237 131 LPDNVDPEV-AAFTELVSVGVHAISRFEQIAH-KDRNVIGVWGD-GNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSF 207 (341)
T ss_pred CCCCCChHH-hhhhchHHHHHHHHHHHhhcCC-CCCCEEEEECC-CHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhh
Confidence 456778765 45778999999998542 345 78999999997 9999999999986 66 489999999999999988
Q ss_pred CCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589 154 LGADYVVDHTIRELDRFANQILSYGSELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 154 LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
.|++.+++ ++.+. .++|+|+|++|+. ....++.++++++++|+++++|
T Consensus 208 ~~~~~~~~-------~~~~~-----~g~d~viD~~G~~~~~~~~~~~~~~l~~~G~iv~~G 256 (341)
T cd08237 208 ADETYLID-------DIPED-----LAVDHAFECVGGRGSQSAINQIIDYIRPQGTIGLMG 256 (341)
T ss_pred cCceeehh-------hhhhc-----cCCcEEEECCCCCccHHHHHHHHHhCcCCcEEEEEe
Confidence 77765432 12211 1699999999963 1123899999999999999998
No 117
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=99.48 E-value=1.3e-12 Score=137.45 Aligned_cols=169 Identities=21% Similarity=0.229 Sum_probs=129.5
Q ss_pred cccccccchhHhhhhhhHHHhCCCCCCCCCCcccccccccccCCcE---Eee---cCCCCCCCCHHhHhhhhhHHHHHHH
Q psy14589 26 KLYPTHACKEHNHVFPLLIQNCGYAEDNIPQLEDISKFLKDSTGFS---LRP---VAGLLSSRDFLAGLAFRVFHSTQYI 99 (655)
Q Consensus 26 ~~l~~~aC~~~~~G~~~l~~~~~y~~~~iP~le~V~~~l~~~~g~~---~~~---v~~l~~~~s~~eAAal~~a~~TA~~ 99 (655)
+.++...|.+|..+..++|...++-... ...+|+ .++ +..+++++++.+++.++++..||++
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~------------~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~a~~ 156 (342)
T cd08266 89 PGISCGRCEYCLAGRENLCAQYGILGEH------------VDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWH 156 (342)
T ss_pred cccccccchhhccccccccccccccccc------------cCcceeEEEEechHHceeCCCCCCHHHHHhhhhHHHHHHH
Confidence 3445667888888876666543321000 011222 222 1224567788899999999999999
Q ss_pred HhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcC-
Q psy14589 100 RHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYG- 178 (655)
Q Consensus 100 aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~- 178 (655)
++.+...+ .+|++|+|+|+++++|++++++++++|++|+++++++++.+.++..|++.+++..+. +..+.+.+..
T Consensus 157 ~l~~~~~~-~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 232 (342)
T cd08266 157 MLVTRARL-RPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKELGADYVIDYRKE---DFVREVRELTG 232 (342)
T ss_pred HHHHhcCC-CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCeEEecCCh---HHHHHHHHHhC
Confidence 98777777 899999999999999999999999999999999999999999999999888887653 4445555443
Q ss_pred -CCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589 179 -SELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 179 -~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
.++|++++++|+.. ++.++++++++|+++.++
T Consensus 233 ~~~~d~~i~~~g~~~---~~~~~~~l~~~G~~v~~~ 265 (342)
T cd08266 233 KRGVDVVVEHVGAAT---WEKSLKSLARGGRLVTCG 265 (342)
T ss_pred CCCCcEEEECCcHHH---HHHHHHHhhcCCEEEEEe
Confidence 37999999999877 889999999999999987
No 118
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=99.48 E-value=6.4e-13 Score=139.73 Aligned_cols=128 Identities=23% Similarity=0.204 Sum_probs=111.8
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD 157 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd 157 (655)
+++++++.+++++++++.||| ++...+.+ ++|++|+|+|++|++|++++|+||++|++|+++++++++.+.++++|++
T Consensus 112 lp~~~~~~~a~~~~~~~~ta~-~~~~~~~~-~~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~~~~g~~ 189 (324)
T cd08244 112 VPDGLDLEAAVAVVHDGRTAL-GLLDLATL-TPGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALVRALGAD 189 (324)
T ss_pred CCCCCCHHHHhhhcchHHHHH-HHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCC
Confidence 456788999999999999995 55566777 8999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCccchhHHHHHHHhcCC--CeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589 158 YVVDHTIRELDRFANQILSYGS--ELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 158 ~vId~~~~~~~d~~~~i~~~~~--gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
.++++.+. ++.+.+.+..+ ++|+++|++|+.. ...++++++++|+++.++
T Consensus 190 ~~~~~~~~---~~~~~~~~~~~~~~~d~vl~~~g~~~---~~~~~~~l~~~g~~v~~g 241 (324)
T cd08244 190 VAVDYTRP---DWPDQVREALGGGGVTVVLDGVGGAI---GRAALALLAPGGRFLTYG 241 (324)
T ss_pred EEEecCCc---cHHHHHHHHcCCCCceEEEECCChHh---HHHHHHHhccCcEEEEEe
Confidence 99987764 45566665532 7999999999887 789999999999999997
No 119
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=99.48 E-value=7.1e-13 Score=146.09 Aligned_cols=178 Identities=12% Similarity=0.018 Sum_probs=122.6
Q ss_pred CCCCCCHHhHhhh-h--hHHHHHHHHh--------hcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC---eEEEEec
Q psy14589 78 LLSSRDFLAGLAF-R--VFHSTQYIRH--------PSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL---TVFASVG 143 (655)
Q Consensus 78 l~~~~s~~eAAal-~--~a~~TA~~aL--------~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga---~Viat~~ 143 (655)
+++++++++++.+ + ++ .+++.++ .+.+.+ ++|++|+|+|++|++|++++|+||++|+ +|+++++
T Consensus 134 lP~~l~~~~aal~epl~~~-~~~~~a~~~~~~~~~~~~~~~-~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~ 211 (410)
T cd08238 134 IYEGDGYAEASLVEPLSCV-IGAYTANYHLQPGEYRHRMGI-KPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDV 211 (410)
T ss_pred CCCCCCHHHHhhcchHHHH-HHHhhhcccccccchhhhcCC-CCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcC
Confidence 4567787777633 2 22 2344332 245677 8999999999889999999999999864 7999999
Q ss_pred ChHHHHHHHhC--------CCc-EEEeCCccchhHHHHHHHhcCC--CeeEEEeCCCcc-hHHHHHHHHHHhccccceEE
Q psy14589 144 CPVGVAKAYGL--------GAD-YVVDHTIRELDRFANQILSYGS--ELDADHPGFTDP-VYRARRKYFADLAFNYKHFF 211 (655)
Q Consensus 144 s~~k~~~a~~L--------GAd-~vId~~~~~~~d~~~~i~~~~~--gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~ 211 (655)
+++|++.++++ ||+ .++|+.+. +++.+.+++.++ ++|+++|++|+. . ++.++++++++|++++
T Consensus 212 ~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~~--~~~~~~v~~~t~g~g~D~vid~~g~~~~---~~~a~~~l~~~G~~v~ 286 (410)
T cd08238 212 NDERLARAQRLFPPEAASRGIELLYVNPATI--DDLHATLMELTGGQGFDDVFVFVPVPEL---VEEADTLLAPDGCLNF 286 (410)
T ss_pred CHHHHHHHHHhccccccccCceEEEECCCcc--ccHHHHHHHHhCCCCCCEEEEcCCCHHH---HHHHHHHhccCCeEEE
Confidence 99999999997 887 57887542 156666766543 799999999865 6 8999999999999887
Q ss_pred EeeccchhhhhhhhhhhhhhhhhhhhhhhheeeccccccccCCCCCCCCeEEEEEEccCCCcchHHHHHHHHHhCCccee
Q psy14589 212 FFFFFFFFFFFFFFFFYFFFFFFFFFYFFYFLLLSQPLIQSCHSCPFSLFDFVIFSNHQDEVGALAKTLKLFKKHNVNLL 291 (655)
Q Consensus 212 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~ll~~p~~~~~~~~~~~~ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt 291 (655)
++.. .. ..............+..++..+... ....+.++++.+++++|++.
T Consensus 287 ~~g~--~~--------------------------~~~~~~~~~~~~~~~~~~i~g~~~~-~~~~~~~~~~li~~g~i~~~ 337 (410)
T cd08238 287 FAGP--VD--------------------------KNFSAPLNFYNVHYNNTHYVGTSGG-NTDDMKEAIDLMAAGKLNPA 337 (410)
T ss_pred EEcc--CC--------------------------CCccccccHHHhhhcCcEEEEeCCC-CHHHHHHHHHHHHcCCCchh
Confidence 6410 00 0000000000011123456655544 45578999999999998864
No 120
>cd04880 ACT_AAAH-PDT-like ACT domain of the nonheme iron-dependent, aromatic amino acid hydroxylases (AAAH). ACT domain of the nonheme iron-dependent, aromatic amino acid hydroxylases (AAAH): Phenylalanine hydroxylases (PAH), tyrosine hydroxylases (TH) and tryptophan hydroxylases (TPH), both peripheral (TPH1) and neuronal (TPH2) enzymes. This family of enzymes shares a common catalytic mechanism, in which dioxygen is used by an active site containing a single, reduced iron atom to hydroxylate an unactivated aromatic substrate, concomitant with a two-electron oxidation of tetrahydropterin (BH4) cofactor to its quinonoid dihydropterin form. Eukaryotic AAAHs have an N-terminal ACT (regulatory) domain, a middle catalytic domain and a C-terminal domain which is responsible for the oligomeric state of the enzyme forming a domain-swapped tetrameric coiled-coil. The PAH, TH, and TPH enzymes contain highly conserved catalytic domains but distinct N-terminal ACT domains and differ in their mech
Probab=99.46 E-value=1.7e-13 Score=115.36 Aligned_cols=72 Identities=33% Similarity=0.529 Sum_probs=68.2
Q ss_pred EEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecC---CchHHHHHHHHHccCCcEEEec
Q psy14589 263 FVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAP---GGDLSSVIESLRSSCSYINIIS 335 (655)
Q Consensus 263 sl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg---~~~v~~~l~~L~~~~~~v~iLG 335 (655)
++.|++++ +||+|+++|+.|+++++||++|+|||.+...|+|.||||+++ +.++++++++|++.+..++++|
T Consensus 1 sl~~~l~d-~pG~L~~vL~~f~~~~vni~~I~Srp~~~~~~~~~f~id~~~~~~~~~~~~~l~~l~~~~~~~~~lG 75 (75)
T cd04880 1 SLVFSLKN-KPGALAKALKVFAERGINLTKIESRPSRKGLWEYEFFVDFEGHIDDPDVKEALEELKRVTEDVKVLG 75 (75)
T ss_pred CEEEEeCC-cCCHHHHHHHHHHHCCCCEEEEEeeecCCCCceEEEEEEEECCCCCHHHHHHHHHHHHhCCeeEECC
Confidence 47888988 899999999999999999999999999999999999999998 6789999999999999999987
No 121
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=99.46 E-value=9.4e-13 Score=136.52 Aligned_cols=129 Identities=20% Similarity=0.102 Sum_probs=114.2
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD 157 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd 157 (655)
++++.+..+++++++...|+++++.+.+.+ ++|++|+|+|++|++|++++++|+++|++|+++++++++.+.++++|++
T Consensus 105 ~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~-~~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~ 183 (320)
T cd05286 105 LPDGISDETAAALLLQGLTAHYLLRETYPV-KPGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELARAAGAD 183 (320)
T ss_pred CCCCCCHHHHhhccchHHHHHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHCCCC
Confidence 456678889999999999999998877888 8999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCccchhHHHHHHHhcC--CCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589 158 YVVDHTIRELDRFANQILSYG--SELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 158 ~vId~~~~~~~d~~~~i~~~~--~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
.+++.... ++.+.+.+.+ .++|++++++|+.. ...++++++++|+++.++
T Consensus 184 ~~~~~~~~---~~~~~~~~~~~~~~~d~vl~~~~~~~---~~~~~~~l~~~g~~v~~g 235 (320)
T cd05286 184 HVINYRDE---DFVERVREITGGRGVDVVYDGVGKDT---FEGSLDSLRPRGTLVSFG 235 (320)
T ss_pred EEEeCCch---hHHHHHHHHcCCCCeeEEEECCCcHh---HHHHHHhhccCcEEEEEe
Confidence 99987653 4666666654 37999999999877 889999999999999987
No 122
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=99.46 E-value=1.6e-12 Score=137.73 Aligned_cols=159 Identities=16% Similarity=0.032 Sum_probs=108.9
Q ss_pred CCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecChHHHHHHHhCCCc
Q psy14589 79 LSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLT-VFASVGCPVGVAKAYGLGAD 157 (655)
Q Consensus 79 ~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~-Viat~~s~~k~~~a~~LGAd 157 (655)
+++++++ +++ .+++.|||+++.+ .. .+|++|+|+|+ |+||++++|+||++|++ |++++.++++++.+++ +
T Consensus 118 p~~~~~~-~a~-~~~~~~a~~~~~~-~~--~~~~~vlV~G~-G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~---~ 188 (308)
T TIGR01202 118 DPALGPQ-GAL-LALAATARHAVAG-AE--VKVLPDLIVGH-GTLGRLLARLTKAAGGSPPAVWETNPRRRDGATG---Y 188 (308)
T ss_pred CCCCCHH-HHh-hhHHHHHHHHHHh-cc--cCCCcEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhh---c
Confidence 3455654 444 4567999999865 33 46899999986 99999999999999997 5566666666665544 4
Q ss_pred EEEeCCccchhHHHHHHHhcCCCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEeeccchhhhhhhhhhhhhhhhhhh
Q psy14589 158 YVVDHTIRELDRFANQILSYGSELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFFFFFFFFFFFFFFFFYFFFFFFFF 236 (655)
Q Consensus 158 ~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~~~~~~~~~~~~~~~~~~~~~~~~ 236 (655)
.++|+.+ + .+.++|+|+||+|++ . ++.++++++++|+++++|..
T Consensus 189 ~~i~~~~----~-------~~~g~Dvvid~~G~~~~---~~~~~~~l~~~G~iv~~G~~--------------------- 233 (308)
T TIGR01202 189 EVLDPEK----D-------PRRDYRAIYDASGDPSL---IDTLVRRLAKGGEIVLAGFY--------------------- 233 (308)
T ss_pred cccChhh----c-------cCCCCCEEEECCCCHHH---HHHHHHhhhcCcEEEEEeec---------------------
Confidence 5666532 1 133799999999986 6 79999999999999999831
Q ss_pred hhhhheeeccccccccCCCCCCCCeEEEEEEccCCCcchHHHHHHHHHhCCcceee
Q psy14589 237 FYFFYFLLLSQPLIQSCHSCPFSLFDFVIFSNHQDEVGALAKTLKLFKKHNVNLLH 292 (655)
Q Consensus 237 ~~~~~F~ll~~p~~~~~~~~~~~~ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~ 292 (655)
..+. .........+..++..+... ....+.++++.++++++++.+
T Consensus 234 ---------~~~~-~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~l~~~g~i~~~~ 278 (308)
T TIGR01202 234 ---------TEPV-NFDFVPAFMKEARLRIAAEW-QPGDLHAVRELIESGALSLDG 278 (308)
T ss_pred ---------CCCc-ccccchhhhcceEEEEeccc-chhHHHHHHHHHHcCCCChhh
Confidence 0000 00000011123445544443 355789999999999998653
No 123
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.46 E-value=2.2e-12 Score=137.75 Aligned_cols=116 Identities=16% Similarity=0.039 Sum_probs=98.4
Q ss_pred hhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecChHHHHHHHhCCCcEEEeCCccch
Q psy14589 89 AFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLT-VFASVGCPVGVAKAYGLGADYVVDHTIREL 167 (655)
Q Consensus 89 al~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~-Viat~~s~~k~~~a~~LGAd~vId~~~~~~ 167 (655)
++.+.+.||++++. ...+ ++|++|+|.| +|++|++++|+||++|++ |+++++++++.+.++++|++.++++...
T Consensus 149 ~l~~~~~~a~~~~~-~~~~-~~g~~vlI~g-~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~~v~~~~~~-- 223 (345)
T cd08287 149 ALSDVMGTGHHAAV-SAGV-RPGSTVVVVG-DGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDIVAERGE-- 223 (345)
T ss_pred hhhcHHHHHHHHHH-hcCC-CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCceEecCCcc--
Confidence 34478899999984 5677 8999999977 599999999999999995 8888888888888999999999998764
Q ss_pred hHHHHHHHhcCC--CeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589 168 DRFANQILSYGS--ELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 168 ~d~~~~i~~~~~--gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
++.+.+.+.++ ++|+++|++|++ . ++.++++++++|+++.++
T Consensus 224 -~~~~~i~~~~~~~~~d~il~~~g~~~~---~~~~~~~l~~~g~~v~~g 268 (345)
T cd08287 224 -EAVARVRELTGGVGADAVLECVGTQES---MEQAIAIARPGGRVGYVG 268 (345)
T ss_pred -cHHHHHHHhcCCCCCCEEEECCCCHHH---HHHHHHhhccCCEEEEec
Confidence 56666766543 799999999875 5 899999999999999876
No 124
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=99.46 E-value=8.1e-13 Score=134.36 Aligned_cols=128 Identities=20% Similarity=0.136 Sum_probs=110.3
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD 157 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd 157 (655)
+++++++.+++++++++.|||+++.....+ ++|++|+|+|+++ +|++++|+|+++|++|+++++++++.+.++++|++
T Consensus 103 ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~-~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~ 180 (271)
T cd05188 103 LPDGLSLEEAALLPEPLATAYHALRRAGVL-KPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLELAKELGAD 180 (271)
T ss_pred CCCCCCHHHhhHhcCHHHHHHHHHHhccCC-CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHhCCc
Confidence 456778999999999999999999888877 7999999999966 99999999999999999999999999999999999
Q ss_pred EEEeCCccchhHHHHHHHhc-CCCeeEEEeCCCc-chHHHHHHHHHHhccccceEEEe
Q psy14589 158 YVVDHTIRELDRFANQILSY-GSELDADHPGFTD-PVYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 158 ~vId~~~~~~~d~~~~i~~~-~~gvDvV~D~vG~-~~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
.++++... +..+.+... .+++|++++++|+ .. ...++++++++|+++.++
T Consensus 181 ~~~~~~~~---~~~~~~~~~~~~~~d~vi~~~~~~~~---~~~~~~~l~~~G~~v~~~ 232 (271)
T cd05188 181 HVIDYKEE---DLEEELRLTGGGGADVVIDAVGGPET---LAQALRLLRPGGRIVVVG 232 (271)
T ss_pred eeccCCcC---CHHHHHHHhcCCCCCEEEECCCCHHH---HHHHHHhcccCCEEEEEc
Confidence 99987764 344444322 2379999999998 56 788999999999999987
No 125
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=99.45 E-value=1.9e-12 Score=137.85 Aligned_cols=126 Identities=17% Similarity=0.073 Sum_probs=107.5
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD 157 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd 157 (655)
+++++++++++++ .+..|+++++ ....+ ++|++|||+|+ |++|.+++|+|+.+|++|+++++++++.+.++++|++
T Consensus 130 ~p~~~~~~~aa~~-~~~~~a~~~~-~~~~l-~~g~~vLI~g~-g~vG~~a~~lA~~~g~~v~~~~~s~~~~~~~~~~g~~ 205 (337)
T cd08261 130 VPEGLSLDQAALV-EPLAIGAHAV-RRAGV-TAGDTVLVVGA-GPIGLGVIQVAKARGARVIVVDIDDERLEFARELGAD 205 (337)
T ss_pred CCCCCCHHHhhhh-chHHHHHHHH-HhcCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEECCCHHHHHHHHHhCCC
Confidence 4567788888776 6778898887 66777 89999999975 9999999999999999999999999999999999999
Q ss_pred EEEeCCccchhHHHHHHHhcCC--CeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589 158 YVVDHTIRELDRFANQILSYGS--ELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 158 ~vId~~~~~~~d~~~~i~~~~~--gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
+++++.+. ++.+.+.+..+ ++|+++|++|+. . +..++++++++|+++.++
T Consensus 206 ~v~~~~~~---~~~~~l~~~~~~~~vd~vld~~g~~~~---~~~~~~~l~~~G~~i~~g 258 (337)
T cd08261 206 DTINVGDE---DVAARLRELTDGEGADVVIDATGNPAS---MEEAVELVAHGGRVVLVG 258 (337)
T ss_pred EEecCccc---CHHHHHHHHhCCCCCCEEEECCCCHHH---HHHHHHHHhcCCEEEEEc
Confidence 99998864 46666665533 699999999875 5 789999999999999886
No 126
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=99.45 E-value=1.2e-12 Score=137.79 Aligned_cols=128 Identities=15% Similarity=0.053 Sum_probs=106.8
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcCC--CCCC-CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhC
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSKP--LYTP-EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGL 154 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~~--~l~~-~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~L 154 (655)
+++++++.+++++++++.|||+++.... .+ + .|++|+|+|++|++|++++|+||++|++|+++++++++++.++++
T Consensus 112 lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~-~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~ 190 (325)
T cd05280 112 LPEGLSLREAMILGTAGFTAALSVHRLEDNGQ-TPEDGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADYLKSL 190 (325)
T ss_pred CCCCCCHHHHHhhHHHHHHHHHHHHHHhhccC-CCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhc
Confidence 4567889999999999999999875432 33 3 467999999999999999999999999999999999999999999
Q ss_pred CCcEEEeCCccchhHHHHHHHhcC-CCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589 155 GADYVVDHTIRELDRFANQILSYG-SELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 155 GAd~vId~~~~~~~d~~~~i~~~~-~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
|++.++++... ..+..+... +++|+|+|++|+.. +..++++++++|+++.+|
T Consensus 191 g~~~~~~~~~~----~~~~~~~~~~~~~d~vi~~~~~~~---~~~~~~~l~~~g~~v~~g 243 (325)
T cd05280 191 GASEVLDREDL----LDESKKPLLKARWAGAIDTVGGDV---LANLLKQTKYGGVVASCG 243 (325)
T ss_pred CCcEEEcchhH----HHHHHHHhcCCCccEEEECCchHH---HHHHHHhhcCCCEEEEEe
Confidence 99999986542 112222222 37999999999887 899999999999999988
No 127
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=99.45 E-value=4.5e-12 Score=135.40 Aligned_cols=124 Identities=19% Similarity=0.083 Sum_probs=106.7
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD 157 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd 157 (655)
+++++++.++++++++..|||+++... .+ ++|++|+|.|+ |++|++++|+||++|++|+++++++++.+.++++|++
T Consensus 139 lp~~~~~~~aa~l~~~~~ta~~~~~~~-~~-~~g~~vlV~g~-g~vG~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~ 215 (337)
T cd05283 139 IPEGLDSAAAAPLLCAGITVYSPLKRN-GV-GPGKRVGVVGI-GGLGHLAVKFAKALGAEVTAFSRSPSKKEDALKLGAD 215 (337)
T ss_pred CCCCCCHHHhhhhhhHHHHHHHHHHhc-CC-CCCCEEEEECC-cHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCc
Confidence 456788999999999999999998665 46 89999999775 9999999999999999999999999999999999999
Q ss_pred EEEeCCccchhHHHHHHHhcCCCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589 158 YVVDHTIRELDRFANQILSYGSELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 158 ~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
.+++.... +.. ....+++|+++|++|+. . ...++++++++|+++.+|
T Consensus 216 ~vi~~~~~---~~~---~~~~~~~d~v~~~~g~~~~---~~~~~~~l~~~G~~v~~g 263 (337)
T cd05283 216 EFIATKDP---EAM---KKAAGSLDLIIDTVSASHD---LDPYLSLLKPGGTLVLVG 263 (337)
T ss_pred EEecCcch---hhh---hhccCCceEEEECCCCcch---HHHHHHHhcCCCEEEEEe
Confidence 99987653 222 22234799999999987 5 789999999999999987
No 128
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=99.44 E-value=1.5e-12 Score=132.89 Aligned_cols=129 Identities=23% Similarity=0.202 Sum_probs=113.9
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCC--
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLG-- 155 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LG-- 155 (655)
++++++..+++.++++..|+|+++.+...+ ++|++|+|+|++|++|++++|+|+.+|++|+++++++++.+.++++|
T Consensus 77 ~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~-~~g~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~ 155 (293)
T cd05195 77 IPDSLSFEEAATLPVAYLTAYYALVDLARL-QKGESVLIHAAAGGVGQAAIQLAQHLGAEVFATVGSEEKREFLRELGGP 155 (293)
T ss_pred CCCCCCHHHHhhchHHHHHHHHHHHHHhcc-CCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhCCC
Confidence 456778889999999999999998777788 89999999999999999999999999999999999989999999988
Q ss_pred CcEEEeCCccchhHHHHHHHhcC--CCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589 156 ADYVVDHTIRELDRFANQILSYG--SELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 156 Ad~vId~~~~~~~d~~~~i~~~~--~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
++.++++... ++.+.+.+.+ .++|+++|++|+.. .+.++++++++|+++.++
T Consensus 156 ~~~~~~~~~~---~~~~~~~~~~~~~~~d~vi~~~~~~~---~~~~~~~l~~~g~~v~~g 209 (293)
T cd05195 156 VDHIFSSRDL---SFADGILRATGGRGVDVVLNSLSGEL---LRASWRCLAPFGRFVEIG 209 (293)
T ss_pred cceEeecCch---hHHHHHHHHhCCCCceEEEeCCCchH---HHHHHHhcccCceEEEee
Confidence 7888987653 5666666653 37999999999887 899999999999999987
No 129
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=99.44 E-value=2e-12 Score=133.74 Aligned_cols=128 Identities=18% Similarity=0.172 Sum_probs=112.7
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD 157 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd 157 (655)
++.+++..+++++++++.|||+++. ...+ ++|++|+|+|++|++|++++|+||++|++|+++++++++.+.++++|++
T Consensus 90 ~p~~~~~~~aa~~~~~~~ta~~~l~-~~~~-~~g~~vli~~~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~ 167 (303)
T cd08251 90 KPASLSFEEACALPVVFLTVIDAFA-RAGL-AKGEHILIQTATGGTGLMAVQLARLKGAEIYATASSDDKLEYLKQLGVP 167 (303)
T ss_pred CCCCCCHHHHHHhHHHHHHHHHHHH-hcCC-CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHcCCC
Confidence 4567789999999999999999984 6777 8999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCccchhHHHHHHHhcC--CCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589 158 YVVDHTIRELDRFANQILSYG--SELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 158 ~vId~~~~~~~d~~~~i~~~~--~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
.++++... ++.+.+.+.+ .++|+++|++++.. ...++++++++|+++.++
T Consensus 168 ~~~~~~~~---~~~~~i~~~~~~~~~d~v~~~~~~~~---~~~~~~~l~~~g~~v~~~ 219 (303)
T cd08251 168 HVINYVEE---DFEEEIMRLTGGRGVDVVINTLSGEA---IQKGLNCLAPGGRYVEIA 219 (303)
T ss_pred EEEeCCCc---cHHHHHHHHcCCCCceEEEECCcHHH---HHHHHHHhccCcEEEEEe
Confidence 99987764 4566666554 37999999998777 889999999999999886
No 130
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=99.43 E-value=1.6e-12 Score=132.76 Aligned_cols=129 Identities=22% Similarity=0.200 Sum_probs=113.3
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCC-
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGA- 156 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGA- 156 (655)
+++++++.+++++++++.|+|+++.+...+ ++|++|+|+|++|++|++++|+||++|++|+++++++++.+.++++|+
T Consensus 73 ~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~-~~g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~ 151 (288)
T smart00829 73 IPDGLSFEEAATVPVVFLTAYYALVDLARL-RPGESVLIHAAAGGVGQAAIQLAQHLGAEVFATAGSPEKRDFLRELGIP 151 (288)
T ss_pred CCCCCCHHHHHhchHHHHHHHHHHHHHhCC-CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCC
Confidence 556788999999999999999998777777 899999999999999999999999999999999999999999999999
Q ss_pred -cEEEeCCccchhHHHHHHHhcC--CCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589 157 -DYVVDHTIRELDRFANQILSYG--SELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 157 -d~vId~~~~~~~d~~~~i~~~~--~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
+.++++... ++.+.+.+.. .++|+++|++|+.. ...++++++++|+++.++
T Consensus 152 ~~~~~~~~~~---~~~~~~~~~~~~~~~d~vi~~~~~~~---~~~~~~~l~~~g~~v~~g 205 (288)
T smart00829 152 DDHIFSSRDL---SFADEILRATGGRGVDVVLNSLAGEF---LDASLRCLAPGGRFVEIG 205 (288)
T ss_pred hhheeeCCCc---cHHHHHHHHhCCCCcEEEEeCCCHHH---HHHHHHhccCCcEEEEEc
Confidence 888887654 4556666543 27999999999776 889999999999999987
No 131
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=99.43 E-value=1.3e-12 Score=138.18 Aligned_cols=123 Identities=15% Similarity=0.093 Sum_probs=107.8
Q ss_pred HHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCC
Q psy14589 84 FLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHT 163 (655)
Q Consensus 84 ~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~ 163 (655)
..+++++++++.|||+++.+.+.+ ++|++|+|+|++|++|++++|+|+++|++|+++++++++.+.++++|++.+++..
T Consensus 114 ~~~~a~l~~~~~ta~~~l~~~~~~-~~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~ 192 (329)
T cd08250 114 KPEVLPLLVSGLTASIALEEVGEM-KSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLKSLGCDRPINYK 192 (329)
T ss_pred cchhhhcccHHHHHHHHHHHhcCC-CCCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHHHHcCCceEEeCC
Confidence 457889999999999999877787 8999999999999999999999999999999999999999999999999999876
Q ss_pred ccchhHHHHHHHhcC-CCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589 164 IRELDRFANQILSYG-SELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 164 ~~~~~d~~~~i~~~~-~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
.. ++.+.+.+.. +++|+++|++|+.. +..++++++++|+++.++
T Consensus 193 ~~---~~~~~~~~~~~~~vd~v~~~~g~~~---~~~~~~~l~~~g~~v~~g 237 (329)
T cd08250 193 TE---DLGEVLKKEYPKGVDVVYESVGGEM---FDTCVDNLALKGRLIVIG 237 (329)
T ss_pred Cc---cHHHHHHHhcCCCCeEEEECCcHHH---HHHHHHHhccCCeEEEEe
Confidence 53 4445554433 37999999999877 899999999999999987
No 132
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=99.43 E-value=1.2e-12 Score=139.98 Aligned_cols=129 Identities=19% Similarity=0.134 Sum_probs=110.4
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcCCCC---------CCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHH
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLY---------TPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGV 148 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l---------~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~ 148 (655)
+++++++.+++++++++.|||+++.+...+ .++|++|+|+|++|++|++++|+||++|++|++++ +++|.
T Consensus 113 ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~~v~~~~-~~~~~ 191 (339)
T cd08249 113 IPDNISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGYKVITTA-SPKNF 191 (339)
T ss_pred CCCCCCHHHceecchHHHHHHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCCeEEEEE-CcccH
Confidence 456788999999999999999998655432 15899999999999999999999999999999887 56888
Q ss_pred HHHHhCCCcEEEeCCccchhHHHHHHHhcC-CCeeEEEeCCCc-chHHHHHHHHHHhcc--ccceEEEe
Q psy14589 149 AKAYGLGADYVVDHTIRELDRFANQILSYG-SELDADHPGFTD-PVYRARRKYFADLAF--NYKHFFFF 213 (655)
Q Consensus 149 ~~a~~LGAd~vId~~~~~~~d~~~~i~~~~-~gvDvV~D~vG~-~~~~~l~~~l~~l~~--gGrlv~v~ 213 (655)
+.++++|+++++++.+. ++.+.+++.+ +++|+++|++|+ .. +..+++++++ +|+++.++
T Consensus 192 ~~~~~~g~~~v~~~~~~---~~~~~l~~~~~~~~d~vl~~~g~~~~---~~~~~~~l~~~~~g~~v~~g 254 (339)
T cd08249 192 DLVKSLGADAVFDYHDP---DVVEDIRAATGGKLRYALDCISTPES---AQLCAEALGRSGGGKLVSLL 254 (339)
T ss_pred HHHHhcCCCEEEECCCc---hHHHHHHHhcCCCeeEEEEeeccchH---HHHHHHHHhccCCCEEEEec
Confidence 99999999999998764 5666666554 389999999998 57 8999999999 99999987
No 133
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=99.43 E-value=1.6e-12 Score=137.21 Aligned_cols=127 Identities=17% Similarity=0.065 Sum_probs=106.8
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcC--CCCCCCCC-EEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhC
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSK--PLYTPEPD-TLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGL 154 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~--~~l~~~Gd-~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~L 154 (655)
+++++++.+++++++++.||++++... ..+ ++|+ +|+|+|++|++|++++|+|+++|++|+++++++++++.++++
T Consensus 111 iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~-~~~~~~vlI~g~~g~vg~~~~~la~~~G~~vi~~~~~~~~~~~~~~~ 189 (323)
T TIGR02823 111 LPEGLSLREAMALGTAGFTAALSVMALERNGL-TPEDGPVLVTGATGGVGSLAVAILSKLGYEVVASTGKAEEEDYLKEL 189 (323)
T ss_pred CCCCCCHHHhhhhhhhHHHHHHHHHHhhhcCC-CCCCceEEEEcCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHhc
Confidence 456788999999999999999876432 336 7898 999999999999999999999999999998889999999999
Q ss_pred CCcEEEeCCccchhHHHHHHHhcC-CCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589 155 GADYVVDHTIRELDRFANQILSYG-SELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 155 GAd~vId~~~~~~~d~~~~i~~~~-~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
|++.+++..+. +. .++... +++|+++|++|+.. +..++++++++|+++.+|
T Consensus 190 g~~~~~~~~~~---~~--~~~~~~~~~~d~vld~~g~~~---~~~~~~~l~~~G~~v~~g 241 (323)
T TIGR02823 190 GASEVIDREDL---SP--PGKPLEKERWAGAVDTVGGHT---LANVLAQLKYGGAVAACG 241 (323)
T ss_pred CCcEEEccccH---HH--HHHHhcCCCceEEEECccHHH---HHHHHHHhCCCCEEEEEc
Confidence 99999986542 21 333332 26999999999887 899999999999999998
No 134
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=99.42 E-value=2.2e-12 Score=136.76 Aligned_cols=128 Identities=26% Similarity=0.214 Sum_probs=110.7
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCC-----CCEEEEEcCCCchHHHHHHHHHHcC-CeEEEEecChHHHHHH
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPE-----PDTLFIIGANRGNGLAAIQVGKAYG-LTVFASVGCPVGVAKA 151 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~-----Gd~VLI~GasGgVG~~avQlAk~~G-a~Viat~~s~~k~~~a 151 (655)
++++.+..++++++++..|||+++.+.+.+ .+ |++|+|+|++|++|++++|+|+++| ++|+++++++++.+.+
T Consensus 113 ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~-~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~ 191 (336)
T cd08252 113 KPKSLSFAEAAALPLTSLTAWEALFDRLGI-SEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGLTVIATASRPESIAWV 191 (336)
T ss_pred CCCCCCHHHhhhhhhHHHHHHHHHHHhcCC-CCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCcEEEEEcCChhhHHHH
Confidence 445678899999999999999998777777 66 9999999999999999999999999 8999999999999999
Q ss_pred HhCCCcEEEeCCccchhHHHHHHHhcC-CCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589 152 YGLGADYVVDHTIRELDRFANQILSYG-SELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 152 ~~LGAd~vId~~~~~~~d~~~~i~~~~-~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
+++|++.++++.. ++.+.+...+ +++|+++|++|+. . +..++++++++|+++.+|
T Consensus 192 ~~~g~~~~~~~~~----~~~~~i~~~~~~~~d~vl~~~~~~~~---~~~~~~~l~~~g~~v~~g 248 (336)
T cd08252 192 KELGADHVINHHQ----DLAEQLEALGIEPVDYIFCLTDTDQH---WDAMAELIAPQGHICLIV 248 (336)
T ss_pred HhcCCcEEEeCCc----cHHHHHHhhCCCCCCEEEEccCcHHH---HHHHHHHhcCCCEEEEec
Confidence 9999999998764 3444555444 3799999999964 6 889999999999999987
No 135
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=99.42 E-value=1.8e-12 Score=138.49 Aligned_cols=128 Identities=20% Similarity=0.050 Sum_probs=110.1
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcC-CeEEEEecChHHHHHHHhCCC
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYG-LTVFASVGCPVGVAKAYGLGA 156 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~G-a~Viat~~s~~k~~~a~~LGA 156 (655)
++++++..++++++++++|||+++.....+ ++|++|+|.|+ |++|++++|+||++| .+|++++++++|.+.++++|+
T Consensus 135 lp~~~~~~~aa~l~~~~~ta~~~~~~~~~~-~~g~~vlI~g~-g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~ 212 (345)
T cd08286 135 LPEGVDEEAAVMLSDILPTGYECGVLNGKV-KPGDTVAIVGA-GPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGA 212 (345)
T ss_pred CCCCCCHHHhhhccchhHHHHHHHHhhcCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCC
Confidence 456778899999999999999987677777 89999999886 999999999999999 699999888899999999999
Q ss_pred cEEEeCCccchhHHHHHHHhcC--CCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589 157 DYVVDHTIRELDRFANQILSYG--SELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 157 d~vId~~~~~~~d~~~~i~~~~--~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
+.++++.+. ++...+.+.+ .++|+++|++|+. . ++.++++++++|+++.+|
T Consensus 213 ~~~v~~~~~---~~~~~i~~~~~~~~~d~vld~~g~~~~---~~~~~~~l~~~g~~v~~g 266 (345)
T cd08286 213 THTVNSAKG---DAIEQVLELTDGRGVDVVIEAVGIPAT---FELCQELVAPGGHIANVG 266 (345)
T ss_pred Cceeccccc---cHHHHHHHHhCCCCCCEEEECCCCHHH---HHHHHHhccCCcEEEEec
Confidence 999998764 4555555543 2799999999875 5 788999999999999987
No 136
>cd04905 ACT_CM-PDT C-terminal ACT domain of the bifunctional chorismate mutase-prephenate dehydratase (CM-PDT) enzyme and the prephenate dehydratase (PDT) enzyme. The C-terminal ACT domain of the bifunctional chorismate mutase-prephenate dehydratase (CM-PDT) enzyme and the prephenate dehydratase (PDT) enzyme, found in plants, fungi, bacteria, and archaea. The P-protein of E. coli (CM-PDT, PheA) catalyzes the conversion of chorismate to prephenate and then the decarboxylation and dehydration to form phenylpyruvate. These are the first two steps in the biosynthesis of L-Phe and L-Tyr via the shikimate pathway in microorganisms and plants. The E. coli P-protein (CM-PDT) has three domains with an N-terminal domain with chorismate mutase activity, a middle domain with prephenate dehydratase activity, and an ACT regulatory C-terminal domain. The prephenate dehydratase enzyme has a PDT and ACT domain. The ACT domain is essential to bring about the negative allosteric regulation by L-Phe bindi
Probab=99.41 E-value=9e-13 Score=112.47 Aligned_cols=75 Identities=23% Similarity=0.416 Sum_probs=71.3
Q ss_pred eEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecC---CchHHHHHHHHHccCCcEEEecC
Q psy14589 261 FDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAP---GGDLSSVIESLRSSCSYINIISR 336 (655)
Q Consensus 261 ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg---~~~v~~~l~~L~~~~~~v~iLGs 336 (655)
++++.+.+++ ++|+|+++++.|++++||+++|+|||.+...|+|.|+||+++ +++++++++.|++.+..+++||+
T Consensus 1 ~~sl~~~~~d-~~G~L~~il~~f~~~~ini~~i~s~p~~~~~~~~~f~vd~~~~~~~~~~~~~l~~l~~~~~~~~~lG~ 78 (80)
T cd04905 1 KTSIVFTLPN-KPGALYDVLGVFAERGINLTKIESRPSKGGLWEYVFFIDFEGHIEDPNVAEALEELKRLTEFVKVLGS 78 (80)
T ss_pred CEEEEEEECC-CCCHHHHHHHHHHHCCcCEEEEEEEEcCCCCceEEEEEEEECCCCCHHHHHHHHHHHHhCCeEEEeee
Confidence 4789999988 899999999999999999999999999999999999999998 67899999999999999999999
No 137
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.41 E-value=8e-12 Score=131.70 Aligned_cols=128 Identities=18% Similarity=0.108 Sum_probs=112.4
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD 157 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd 157 (655)
+++++++.+++.+++++.|||+++...+.+ ++|++|+|+| +|++|++++++|+++|++|++++.++++++.++++|++
T Consensus 129 lp~~~~~~~a~~~~~~~~~a~~~l~~~~~~-~~g~~vli~g-~g~~g~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~ 206 (336)
T cd08276 129 APDHLSFEEAATLPCAGLTAWNALFGLGPL-KPGDTVLVQG-TGGVSLFALQFAKAAGARVIATSSSDEKLERAKALGAD 206 (336)
T ss_pred CCCCCCHHHhhhhhHHHHHHHHHHHhhcCC-CCCCEEEEEC-CcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCC
Confidence 456778899999999999999998877787 8999999996 59999999999999999999999999999999999999
Q ss_pred EEEeCCc-cchhHHHHHHHhcCC--CeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589 158 YVVDHTI-RELDRFANQILSYGS--ELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 158 ~vId~~~-~~~~d~~~~i~~~~~--gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
.++++.. . ++...+.+.++ ++|+++|++|+.. +..++++++++|+++.+|
T Consensus 207 ~~~~~~~~~---~~~~~~~~~~~~~~~d~~i~~~~~~~---~~~~~~~l~~~G~~v~~g 259 (336)
T cd08276 207 HVINYRTTP---DWGEEVLKLTGGRGVDHVVEVGGPGT---LAQSIKAVAPGGVISLIG 259 (336)
T ss_pred EEEcCCccc---CHHHHHHHHcCCCCCcEEEECCChHH---HHHHHHhhcCCCEEEEEc
Confidence 9998765 3 45566666543 8999999999777 889999999999999987
No 138
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=99.41 E-value=8e-12 Score=132.36 Aligned_cols=119 Identities=16% Similarity=-0.008 Sum_probs=104.1
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD 157 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd 157 (655)
+++++++.+++++++++.|||+++ ..+.+ ++|++|+|+|+ |++|++++|+||++|++|+++++++++++.++++|++
T Consensus 137 lp~~~~~~~~~~~~~~~~ta~~~~-~~~~~-~~~~~vlV~g~-g~vg~~~~~la~~~g~~v~~~~~~~~~~~~~~~~g~~ 213 (329)
T cd08298 137 IPEDYDDEEAAPLLCAGIIGYRAL-KLAGL-KPGQRLGLYGF-GASAHLALQIARYQGAEVFAFTRSGEHQELARELGAD 213 (329)
T ss_pred CCCCCCHHHhhHhhhhhHHHHHHH-HhhCC-CCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEcCChHHHHHHHHhCCc
Confidence 456778999999999999999998 77888 89999999985 9999999999999999999999999999999999999
Q ss_pred EEEeCCccchhHHHHHHHhcCCCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589 158 YVVDHTIRELDRFANQILSYGSELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 158 ~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
.++++... ...++|+++++.+.. . ++.++++++++|+++.++
T Consensus 214 ~~~~~~~~-----------~~~~vD~vi~~~~~~~~---~~~~~~~l~~~G~~v~~g 256 (329)
T cd08298 214 WAGDSDDL-----------PPEPLDAAIIFAPVGAL---VPAALRAVKKGGRVVLAG 256 (329)
T ss_pred EEeccCcc-----------CCCcccEEEEcCCcHHH---HHHHHHHhhcCCEEEEEc
Confidence 98876541 112689999987654 5 899999999999999876
No 139
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=99.40 E-value=3e-12 Score=139.16 Aligned_cols=129 Identities=16% Similarity=0.015 Sum_probs=106.2
Q ss_pred CCCCCCHH---hHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHh
Q psy14589 78 LLSSRDFL---AGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYG 153 (655)
Q Consensus 78 l~~~~s~~---eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~ 153 (655)
+++++++. ++++++++..|||+++ ....+ ++|++|+|.|+ |++|++++|+||++|+ +|++++++++|.+.+++
T Consensus 143 lP~~~~~~~~~~~a~~~~~~~ta~~a~-~~~~~-~~g~~vlI~g~-g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~ 219 (375)
T cd08282 143 LPDRDGAKEKDDYLMLSDIFPTGWHGL-ELAGV-QPGDTVAVFGA-GPVGLMAAYSAILRGASRVYVVDHVPERLDLAES 219 (375)
T ss_pred CCCCCChhhhhheeeecchHHHHHHHH-HhcCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH
Confidence 45667777 5688899999999998 67777 89999999776 9999999999999998 79999999999999999
Q ss_pred CCCcEEEeCCccchhHHHHHHHhcCC-CeeEEEeCCCcchH---------HHHHHHHHHhccccceEEEe
Q psy14589 154 LGADYVVDHTIRELDRFANQILSYGS-ELDADHPGFTDPVY---------RARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 154 LGAd~vId~~~~~~~d~~~~i~~~~~-gvDvV~D~vG~~~~---------~~l~~~l~~l~~gGrlv~v~ 213 (655)
+|++ .+++.+. ++.+.+.+.++ ++|+++||+|+..+ ..++.++++++++|+++.++
T Consensus 220 ~g~~-~v~~~~~---~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g 285 (375)
T cd08282 220 IGAI-PIDFSDG---DPVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVG 285 (375)
T ss_pred cCCe-EeccCcc---cHHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEe
Confidence 9994 5677653 45666666543 79999999997621 12788999999999998887
No 140
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.39 E-value=3.7e-12 Score=132.95 Aligned_cols=121 Identities=21% Similarity=0.150 Sum_probs=105.6
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD 157 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd 157 (655)
+++++++.+++++++++.|||+++...... +|++|+|+|++|++|++++|+||++|++|+++++++++.+.++++|++
T Consensus 102 ip~~~~~~~a~~~~~~~~ta~~~~~~~~~~--~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~ 179 (305)
T cd08270 102 LPDGVSFAQAATLPVAGVTALRALRRGGPL--LGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEGLRELGAA 179 (305)
T ss_pred CCCCCCHHHHHHhHhHHHHHHHHHHHhCCC--CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCc
Confidence 456788999999999999999998777655 599999999999999999999999999999999999999999999998
Q ss_pred EEEeCCccchhHHHHHHHhcCCCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589 158 YVVDHTIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 158 ~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
.+++... ++. .+++|+++|++|+.. +..++++++++|+++.+|
T Consensus 180 ~~~~~~~----~~~------~~~~d~vl~~~g~~~---~~~~~~~l~~~G~~v~~g 222 (305)
T cd08270 180 EVVVGGS----ELS------GAPVDLVVDSVGGPQ---LARALELLAPGGTVVSVG 222 (305)
T ss_pred EEEeccc----ccc------CCCceEEEECCCcHH---HHHHHHHhcCCCEEEEEe
Confidence 7765332 111 137999999999887 899999999999999998
No 141
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=99.39 E-value=1.4e-11 Score=130.60 Aligned_cols=124 Identities=18% Similarity=0.089 Sum_probs=105.3
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD 157 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd 157 (655)
+++++++.+++++++++.|||+++.. ..+ ++|++|+|+|+ |++|++++++|+++|++|+++++++++.+.++++|++
T Consensus 132 ~p~~~~~~~~~~l~~~~~ta~~~l~~-~~~-~~~~~vlI~g~-g~iG~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~ 208 (330)
T cd08245 132 LPDGLPLAQAAPLLCAGITVYSALRD-AGP-RPGERVAVLGI-GGLGHLAVQYARAMGFETVAITRSPDKRELARKLGAD 208 (330)
T ss_pred CCCCCCHHHhhhhhhhHHHHHHHHHh-hCC-CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCc
Confidence 45677899999999999999999865 667 89999999976 8899999999999999999999999999999999999
Q ss_pred EEEeCCccchhHHHHHHHhcCCCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589 158 YVVDHTIRELDRFANQILSYGSELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 158 ~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
.+++.... +.... ..+++|+++|++|+. . ...++++++++|+++.++
T Consensus 209 ~~~~~~~~---~~~~~---~~~~~d~vi~~~~~~~~---~~~~~~~l~~~G~~i~~~ 256 (330)
T cd08245 209 EVVDSGAE---LDEQA---AAGGADVILVTVVSGAA---AEAALGGLRRGGRIVLVG 256 (330)
T ss_pred EEeccCCc---chHHh---ccCCCCEEEECCCcHHH---HHHHHHhcccCCEEEEEC
Confidence 99987653 22222 223799999998864 5 789999999999999986
No 142
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=99.39 E-value=6.4e-12 Score=130.79 Aligned_cols=129 Identities=21% Similarity=0.182 Sum_probs=113.4
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD 157 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd 157 (655)
++.+++..+++++++++.|||+++...+.+ ++|++|+|+|++|++|++++++++++|++|+++++++++.+.++++|++
T Consensus 113 ip~~~~~~~aa~~~~~~~~a~~~l~~~~~~-~~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~ 191 (325)
T cd08253 113 LPDGVSFEQGAALGIPALTAYRALFHRAGA-KAGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVRQAGAD 191 (325)
T ss_pred CCCCCCHHHHhhhhhHHHHHHHHHHHHhCC-CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCC
Confidence 445778899999999999999998877787 8999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCccchhHHHHHHHhcC--CCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589 158 YVVDHTIRELDRFANQILSYG--SELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 158 ~vId~~~~~~~d~~~~i~~~~--~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
.+++.... ++.+.+.+.. .++|++++++|+.. ....+++++.+|+++.++
T Consensus 192 ~~~~~~~~---~~~~~~~~~~~~~~~d~vi~~~~~~~---~~~~~~~l~~~g~~v~~~ 243 (325)
T cd08253 192 AVFNYRAE---DLADRILAATAGQGVDVIIEVLANVN---LAKDLDVLAPGGRIVVYG 243 (325)
T ss_pred EEEeCCCc---CHHHHHHHHcCCCceEEEEECCchHH---HHHHHHhhCCCCEEEEEe
Confidence 99987654 4555665543 37999999999887 788899999999999987
No 143
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=99.39 E-value=1.1e-11 Score=132.26 Aligned_cols=128 Identities=19% Similarity=0.135 Sum_probs=102.7
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecChHHHHHHHhCCC
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLT-VFASVGCPVGVAKAYGLGA 156 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~-Viat~~s~~k~~~a~~LGA 156 (655)
+++++++++++ ++++++|||+++ ..+.+ ++|++|+|+|+ |++|.+++|+||++|++ |+++++++++.+.++++|+
T Consensus 132 lP~~~s~~~a~-~~~~~~~a~~~~-~~~~~-~~g~~VlI~g~-g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~ 207 (341)
T cd08262 132 VPDGLSMEDAA-LTEPLAVGLHAV-RRARL-TPGEVALVIGC-GPIGLAVIAALKARGVGPIVASDFSPERRALALAMGA 207 (341)
T ss_pred CCCCCCHHHhh-hhhhHHHHHHHH-HhcCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCC
Confidence 45677777665 778999999995 66777 89999999986 99999999999999996 6777778899999999999
Q ss_pred cEEEeCCccch-hHHHHHHHhc-C-CCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589 157 DYVVDHTIREL-DRFANQILSY-G-SELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 157 d~vId~~~~~~-~d~~~~i~~~-~-~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
++++++..... +++. .+.+. . +++|+++|++|+. . +..++++++++|+++.+|
T Consensus 208 ~~~i~~~~~~~~~~~~-~~~~~~~~~~~d~vid~~g~~~~---~~~~~~~l~~~g~~v~~g 264 (341)
T cd08262 208 DIVVDPAADSPFAAWA-AELARAGGPKPAVIFECVGAPGL---IQQIIEGAPPGGRIVVVG 264 (341)
T ss_pred cEEEcCCCcCHHHHHH-HHHHHhCCCCCCEEEECCCCHHH---HHHHHHHhccCCEEEEEC
Confidence 99999765310 1122 22222 2 3799999999985 6 788999999999999987
No 144
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=99.38 E-value=6.6e-12 Score=133.79 Aligned_cols=126 Identities=20% Similarity=0.153 Sum_probs=107.5
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecChHHHHHHHhCCC
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLT-VFASVGCPVGVAKAYGLGA 156 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~-Viat~~s~~k~~~a~~LGA 156 (655)
+++++++.+++.+ +++.|||+++... .+ ++|++|+|+|+ |++|++++|+||++|++ |+++++++++.+.++++|+
T Consensus 136 lP~~~~~~~aa~~-~~~~~a~~~l~~~-~~-~~g~~VlV~g~-g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~ 211 (343)
T cd08235 136 LPDNVSFEEAALV-EPLACCINAQRKA-GI-KPGDTVLVIGA-GPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGA 211 (343)
T ss_pred CCCCCCHHHHHhh-hHHHHHHHHHHhc-CC-CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCC
Confidence 4567788888765 8899999998654 77 89999999975 99999999999999998 9999999999999999999
Q ss_pred cEEEeCCccchhHHHHHHHhcCC--CeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589 157 DYVVDHTIRELDRFANQILSYGS--ELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 157 d~vId~~~~~~~d~~~~i~~~~~--gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
+.++++.+. ++.+.+.+..+ ++|+++|++|+. . +..++++++++|+++.++
T Consensus 212 ~~~~~~~~~---~~~~~i~~~~~~~~vd~vld~~~~~~~---~~~~~~~l~~~g~~v~~~ 265 (343)
T cd08235 212 DYTIDAAEE---DLVEKVRELTDGRGADVVIVATGSPEA---QAQALELVRKGGRILFFG 265 (343)
T ss_pred cEEecCCcc---CHHHHHHHHhCCcCCCEEEECCCChHH---HHHHHHHhhcCCEEEEEe
Confidence 999998764 56666665532 699999999976 6 789999999999999887
No 145
>PLN02702 L-idonate 5-dehydrogenase
Probab=99.37 E-value=6.5e-12 Score=135.72 Aligned_cols=172 Identities=12% Similarity=0.052 Sum_probs=120.4
Q ss_pred ccccccccchhHhhhhhhHHHhCCCCC-CCCCCcccccccccccCCcEEeec---CCCCCCCCHHhHhhhhhHHHHHHHH
Q psy14589 25 TKLYPTHACKEHNHVFPLLIQNCGYAE-DNIPQLEDISKFLKDSTGFSLRPV---AGLLSSRDFLAGLAFRVFHSTQYIR 100 (655)
Q Consensus 25 ~~~l~~~aC~~~~~G~~~l~~~~~y~~-~~iP~le~V~~~l~~~~g~~~~~v---~~l~~~~s~~eAAal~~a~~TA~~a 100 (655)
.+.+....|..|+.|..++|.+..+-. ...++ ....+..++. ..+++++++.++++ ..+..+++++
T Consensus 104 ~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~g---------~~~~y~~v~~~~~~~~P~~l~~~~aa~-~~~~~~a~~~ 173 (364)
T PLN02702 104 EPGISCWRCNLCKEGRYNLCPEMKFFATPPVHG---------SLANQVVHPADLCFKLPENVSLEEGAM-CEPLSVGVHA 173 (364)
T ss_pred cCCCCCCCCcchhCcCcccCCCccccCCCCCCC---------cccceEEcchHHeEECCCCCCHHHHhh-hhHHHHHHHH
Confidence 345567789999999877776543210 00010 0011112221 13456677777764 2455568888
Q ss_pred hhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhc--
Q psy14589 101 HPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLT-VFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSY-- 177 (655)
Q Consensus 101 L~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~-Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~-- 177 (655)
+ ....+ .+|++|+|+|+ |++|++++|+||++|++ |++++++++|.+.++++|++.++++.... .++.+.+.+.
T Consensus 174 ~-~~~~~-~~g~~vlI~g~-g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~ 249 (364)
T PLN02702 174 C-RRANI-GPETNVLVMGA-GPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVSTNI-EDVESEVEEIQK 249 (364)
T ss_pred H-HhcCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEecCccc-ccHHHHHHHHhh
Confidence 7 56677 79999999975 99999999999999995 77888888899999999999998754211 1344554432
Q ss_pred --CCCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589 178 --GSELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 178 --~~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
.+++|+|+|++|+. . +..++++++++|+++.+|
T Consensus 250 ~~~~~~d~vid~~g~~~~---~~~~~~~l~~~G~~v~~g 285 (364)
T PLN02702 250 AMGGGIDVSFDCVGFNKT---MSTALEATRAGGKVCLVG 285 (364)
T ss_pred hcCCCCCEEEECCCCHHH---HHHHHHHHhcCCEEEEEc
Confidence 23799999999954 6 899999999999999987
No 146
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=99.37 E-value=1.1e-11 Score=131.12 Aligned_cols=127 Identities=19% Similarity=0.045 Sum_probs=104.4
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEe--cChHHHHHHHhCC
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASV--GCPVGVAKAYGLG 155 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~--~s~~k~~~a~~LG 155 (655)
+++++++.+++ ++.+.+|||+++...+.+ ++|++|+|.| +|++|++++|+||++|++|+++. .++++.+.++++|
T Consensus 134 lp~~~~~~~aa-~~~~~~~a~~~l~~~~~~-~~g~~vlI~g-~g~~g~~~~~la~~~G~~v~~~~~~~~~~~~~~~~~~g 210 (306)
T cd08258 134 LPENLSLEAAA-LTEPLAVAVHAVAERSGI-RPGDTVVVFG-PGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAKELG 210 (306)
T ss_pred CcCCCCHHHHH-hhchHHHHHHHHHHhcCC-CCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHhC
Confidence 45677777665 888999999998888888 8999999976 59999999999999999987763 3455778889999
Q ss_pred CcEEEeCCccchhHHHHHHHhcC--CCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEee
Q psy14589 156 ADYVVDHTIRELDRFANQILSYG--SELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFFF 214 (655)
Q Consensus 156 Ad~vId~~~~~~~d~~~~i~~~~--~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~~ 214 (655)
++++ ++... ++.+.+.+.. .++|+++|++|+. . +..++++++++|+++.++.
T Consensus 211 ~~~~-~~~~~---~~~~~l~~~~~~~~vd~vld~~g~~~~---~~~~~~~l~~~G~~v~~g~ 265 (306)
T cd08258 211 ADAV-NGGEE---DLAELVNEITDGDGADVVIECSGAVPA---LEQALELLRKGGRIVQVGI 265 (306)
T ss_pred Cccc-CCCcC---CHHHHHHHHcCCCCCCEEEECCCChHH---HHHHHHHhhcCCEEEEEcc
Confidence 9988 87654 5666666543 3799999999864 5 7899999999999999983
No 147
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=99.37 E-value=7e-12 Score=133.78 Aligned_cols=127 Identities=17% Similarity=0.118 Sum_probs=108.2
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCC----CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPE----PDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG 153 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~----Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~ 153 (655)
++++++..+++++++++.|||+++.+.+.+ .+ |++|+|+|++|++|++++++|+++|++|++++++ ++.+.+++
T Consensus 127 lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~-~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~~~~~~~~ 204 (350)
T cd08248 127 KPKNLSHEEAASLPYAGLTAWSALVNVGGL-NPKNAAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-DAIPLVKS 204 (350)
T ss_pred CCCCCCHHHHhhchhHHHHHHHHHHHhccC-CCccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-chHHHHHH
Confidence 456778889999999999999998777665 44 9999999999999999999999999999888764 67778899
Q ss_pred CCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589 154 LGADYVVDHTIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 154 LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
+|++.+++.... ++.+.+... +++|+++|++|+.. ...++++++++|+++.++
T Consensus 205 ~g~~~~~~~~~~---~~~~~l~~~-~~vd~vi~~~g~~~---~~~~~~~l~~~G~~v~~g 257 (350)
T cd08248 205 LGADDVIDYNNE---DFEEELTER-GKFDVILDTVGGDT---EKWALKLLKKGGTYVTLV 257 (350)
T ss_pred hCCceEEECCCh---hHHHHHHhc-CCCCEEEECCChHH---HHHHHHHhccCCEEEEec
Confidence 999999987653 444555433 47999999999887 899999999999999986
No 148
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=99.37 E-value=1.1e-11 Score=129.22 Aligned_cols=129 Identities=19% Similarity=0.200 Sum_probs=112.7
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD 157 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd 157 (655)
++++.++.+++++++++.|+|+++.+...+ ++|++|+|+|++|++|++++++|+.+|++|+++++++++.+.++++|++
T Consensus 108 ip~~~~~~~~~~~~~~~~ta~~~~~~~~~~-~~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~ 186 (325)
T TIGR02824 108 VPEGLSLVEAAALPETFFTVWSNLFQRGGL-KAGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAACEALGAD 186 (325)
T ss_pred CCCCCCHHHHHhhhHHHHHHHHHHHHhcCC-CCCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCc
Confidence 445678889999999999999998777888 8999999999999999999999999999999999999998889999999
Q ss_pred EEEeCCccchhHHHHHHHhcC--CCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589 158 YVVDHTIRELDRFANQILSYG--SELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 158 ~vId~~~~~~~d~~~~i~~~~--~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
.+++.... ++.+.+.+.. .++|++++++|+.. ...++++++++|+++.++
T Consensus 187 ~~~~~~~~---~~~~~~~~~~~~~~~d~~i~~~~~~~---~~~~~~~l~~~g~~v~~g 238 (325)
T TIGR02824 187 IAINYREE---DFVEVVKAETGGKGVDVILDIVGGSY---LNRNIKALALDGRIVQIG 238 (325)
T ss_pred EEEecCch---hHHHHHHHHcCCCCeEEEEECCchHH---HHHHHHhhccCcEEEEEe
Confidence 88887653 4556665543 27999999999877 889999999999999987
No 149
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=99.37 E-value=6.9e-12 Score=133.92 Aligned_cols=125 Identities=14% Similarity=0.066 Sum_probs=102.3
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCC
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGA 156 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGA 156 (655)
+++++++.+++ ..+++.++++++.. .. .+|++|+|.|+ |++|++++|+||++|+ +|+++++++++.+.++++|+
T Consensus 135 iP~~l~~~~~~-~~~~~~~~~~~~~~--~~-~~g~~vlV~~~-g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~ 209 (341)
T PRK05396 135 IPDDIPDDLAA-IFDPFGNAVHTALS--FD-LVGEDVLITGA-GPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGA 209 (341)
T ss_pred CcCCCCHHHhH-hhhHHHHHHHHHHc--CC-CCCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCC
Confidence 45667777766 44677777776543 23 58999999875 9999999999999999 68888888999999999999
Q ss_pred cEEEeCCccchhHHHHHHHhcC--CCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589 157 DYVVDHTIRELDRFANQILSYG--SELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 157 d~vId~~~~~~~d~~~~i~~~~--~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
+.++++++. ++.+.+.+.+ .++|+|+||+|+. . ++.++++++++|+++.++
T Consensus 210 ~~~~~~~~~---~~~~~~~~~~~~~~~d~v~d~~g~~~~---~~~~~~~l~~~G~~v~~g 263 (341)
T PRK05396 210 TRAVNVAKE---DLRDVMAELGMTEGFDVGLEMSGAPSA---FRQMLDNMNHGGRIAMLG 263 (341)
T ss_pred cEEecCccc---cHHHHHHHhcCCCCCCEEEECCCCHHH---HHHHHHHHhcCCEEEEEe
Confidence 999998764 5667776654 3899999999875 5 789999999999999997
No 150
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=99.35 E-value=1.3e-11 Score=130.11 Aligned_cols=127 Identities=17% Similarity=0.099 Sum_probs=105.3
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhh---cCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhC
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHP---SKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGL 154 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~---~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~L 154 (655)
++++++++++++++++++|+++++. .. ...++|++|+|+|++|++|++++|+|+++|++|++++++++|.+.++++
T Consensus 112 lp~~~~~~~~~~~~~~~~ta~~~~~~~~~~-~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~~vi~~~~~~~~~~~~~~~ 190 (324)
T cd08288 112 LPEGLSARQAMAIGTAGFTAMLCVMALEDH-GVTPGDGPVLVTGAAGGVGSVAVALLARLGYEVVASTGRPEEADYLRSL 190 (324)
T ss_pred CCCCCCHHHHhhhhhHHHHHHHHHHHHhhc-CcCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhc
Confidence 4567789999999999999987653 33 3314688999999999999999999999999999999999999999999
Q ss_pred CCcEEEeCCccchhHHHHHHHhcC-CCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589 155 GADYVVDHTIRELDRFANQILSYG-SELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 155 GAd~vId~~~~~~~d~~~~i~~~~-~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
|++.++++.+. ...+.... +++|.++|++|+.. +..++..++.+|+++.+|
T Consensus 191 g~~~~~~~~~~-----~~~~~~~~~~~~~~~~d~~~~~~---~~~~~~~~~~~g~~~~~G 242 (324)
T cd08288 191 GASEIIDRAEL-----SEPGRPLQKERWAGAVDTVGGHT---LANVLAQTRYGGAVAACG 242 (324)
T ss_pred CCCEEEEcchh-----hHhhhhhccCcccEEEECCcHHH---HHHHHHHhcCCCEEEEEE
Confidence 99999997642 22344433 26899999999866 778889999999999998
No 151
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=99.35 E-value=1.8e-11 Score=127.17 Aligned_cols=129 Identities=20% Similarity=0.194 Sum_probs=112.8
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD 157 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd 157 (655)
+++++++.+++++++++.|+|+++.+...+ .+|++|+|+|++|++|++++++++++|++|+++++++++.+.++++|++
T Consensus 108 ~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~-~~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~ 186 (323)
T cd05276 108 VPEGLSLVEAAALPEVFFTAWQNLFQLGGL-KAGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEACRALGAD 186 (323)
T ss_pred CCCCCCHHHHhhchhHHHHHHHHHHHhcCC-CCCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHcCCC
Confidence 445678889999999999999998777777 8999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCccchhHHHHHHHhcC--CCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589 158 YVVDHTIRELDRFANQILSYG--SELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 158 ~vId~~~~~~~d~~~~i~~~~--~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
.+++.... +..+.+.+.. +++|+++|++|+.. ...++++++++|+++.++
T Consensus 187 ~~~~~~~~---~~~~~~~~~~~~~~~d~vi~~~g~~~---~~~~~~~~~~~g~~i~~~ 238 (323)
T cd05276 187 VAINYRTE---DFAEEVKEATGGRGVDVILDMVGGDY---LARNLRALAPDGRLVLIG 238 (323)
T ss_pred EEEeCCch---hHHHHHHHHhCCCCeEEEEECCchHH---HHHHHHhhccCCEEEEEe
Confidence 99887653 4555555543 37999999999887 788999999999999987
No 152
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=99.32 E-value=2.9e-11 Score=125.81 Aligned_cols=129 Identities=25% Similarity=0.272 Sum_probs=112.5
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD 157 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd 157 (655)
++.+++..++++++++..||++++.....+ ++|++|+|+|++|++|++++++|+.+|++|+++++++++.+.++++|++
T Consensus 108 ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~-~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~ 186 (323)
T cd08241 108 LPDGLSFEEAAALPVTYGTAYHALVRRARL-QPGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALARALGAD 186 (323)
T ss_pred CCCCCCHHHHhhhhhHHHHHHHHHHHhcCC-CCCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHHHHcCCc
Confidence 345677888888999999999998777777 8999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCccchhHHHHHHHhcC--CCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589 158 YVVDHTIRELDRFANQILSYG--SELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 158 ~vId~~~~~~~d~~~~i~~~~--~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
.+++.... ++.+.+.+.+ .++|++++++|+.. ...++++++++|+++.++
T Consensus 187 ~~~~~~~~---~~~~~i~~~~~~~~~d~v~~~~g~~~---~~~~~~~~~~~g~~v~~~ 238 (323)
T cd08241 187 HVIDYRDP---DLRERVKALTGGRGVDVVYDPVGGDV---FEASLRSLAWGGRLLVIG 238 (323)
T ss_pred eeeecCCc---cHHHHHHHHcCCCCcEEEEECccHHH---HHHHHHhhccCCEEEEEc
Confidence 99887653 5666666653 27999999999876 888999999999999987
No 153
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.31 E-value=3.2e-11 Score=125.91 Aligned_cols=129 Identities=22% Similarity=0.180 Sum_probs=112.6
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD 157 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd 157 (655)
++.+.+..+++++++++.|+|+++.....+ .+|++|+|+|++|++|++++++++..|++|+++++++++.+.++++|++
T Consensus 113 ~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~-~~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~ 191 (328)
T cd08268 113 LPDGLSFVEAAALWMQYLTAYGALVELAGL-RPGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDALLALGAA 191 (328)
T ss_pred CCCCCCHHHHHHhhhHHHHHHHHHHHhcCC-CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHcCCC
Confidence 445678889999999999999998877787 8999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCccchhHHHHHHHhcC--CCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589 158 YVVDHTIRELDRFANQILSYG--SELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 158 ~vId~~~~~~~d~~~~i~~~~--~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
.+++.... +..+.+.+.. .++|++++++|+.. ...++++++++|+++.++
T Consensus 192 ~~~~~~~~---~~~~~~~~~~~~~~~d~vi~~~~~~~---~~~~~~~l~~~g~~v~~g 243 (328)
T cd08268 192 HVIVTDEE---DLVAEVLRITGGKGVDVVFDPVGGPQ---FAKLADALAPGGTLVVYG 243 (328)
T ss_pred EEEecCCc---cHHHHHHHHhCCCCceEEEECCchHh---HHHHHHhhccCCEEEEEE
Confidence 99987653 4555555543 27999999999877 889999999999999987
No 154
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=99.31 E-value=2.1e-11 Score=130.07 Aligned_cols=125 Identities=20% Similarity=0.065 Sum_probs=105.6
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecChHHHHHHHhCCC
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLT-VFASVGCPVGVAKAYGLGA 156 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~-Viat~~s~~k~~~a~~LGA 156 (655)
+++++++.++|++ .+++|||+++. ...+ ++|++|+|+|+ |++|.+++|+||++|++ |+++++++++.+.++++|+
T Consensus 130 lP~~~~~~~aa~~-~~~~ta~~~l~-~~~~-~~~~~vlI~g~-g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~ 205 (343)
T cd08236 130 IPDHVDYEEAAMI-EPAAVALHAVR-LAGI-TLGDTVVVIGA-GTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGA 205 (343)
T ss_pred CcCCCCHHHHHhc-chHHHHHHHHH-hcCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCC
Confidence 4567788888777 68899999986 5667 89999999975 99999999999999997 9999988999999999999
Q ss_pred cEEEeCCccchhHHHHHHHhcCC--CeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589 157 DYVVDHTIRELDRFANQILSYGS--ELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 157 d~vId~~~~~~~d~~~~i~~~~~--gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
+.++++.+. . .+.+.+..+ ++|+++|++|+. . +..++++++++|+++.+|
T Consensus 206 ~~~~~~~~~---~-~~~~~~~~~~~~~d~vld~~g~~~~---~~~~~~~l~~~G~~v~~g 258 (343)
T cd08236 206 DDTINPKEE---D-VEKVRELTEGRGADLVIEAAGSPAT---IEQALALARPGGKVVLVG 258 (343)
T ss_pred CEEecCccc---c-HHHHHHHhCCCCCCEEEECCCCHHH---HHHHHHHhhcCCEEEEEc
Confidence 999998764 3 445554432 699999999875 5 789999999999999987
No 155
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.31 E-value=2.3e-11 Score=128.43 Aligned_cols=126 Identities=17% Similarity=0.147 Sum_probs=106.2
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD 157 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd 157 (655)
++++.+..++++++++..|||+++.+.+.+ ++|++|+|+|++|++|++++|+||++|++|++++. +++.+.++++|++
T Consensus 108 ~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~-~~g~~vlI~g~~g~ig~~~~~~a~~~g~~v~~~~~-~~~~~~~~~~g~~ 185 (331)
T cd08273 108 VPEGVDAAEAVCLVLNYVTAYQMLHRAAKV-LTGQRVLIHGASGGVGQALLELALLAGAEVYGTAS-ERNHAALRELGAT 185 (331)
T ss_pred CCCCCCHHHHHhhhhHHHHHHHHHHHhcCC-CCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeC-HHHHHHHHHcCCe
Confidence 556778889999999999999998877777 89999999999999999999999999999999987 8888889999986
Q ss_pred EEEeCCccchhHHHHHHHhcCCCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589 158 YVVDHTIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 158 ~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
. +++... +.... ....+++|+++|++|+.. ...++++++++|+++.+|
T Consensus 186 ~-~~~~~~---~~~~~-~~~~~~~d~vl~~~~~~~---~~~~~~~l~~~g~~v~~g 233 (331)
T cd08273 186 P-IDYRTK---DWLPA-MLTPGGVDVVFDGVGGES---YEESYAALAPGGTLVCYG 233 (331)
T ss_pred E-EcCCCc---chhhh-hccCCCceEEEECCchHH---HHHHHHHhcCCCEEEEEc
Confidence 5 454432 23322 212247999999999887 889999999999999987
No 156
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.31 E-value=3.6e-11 Score=125.63 Aligned_cols=127 Identities=18% Similarity=0.168 Sum_probs=110.8
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD 157 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd 157 (655)
+++++++.++++++++..|||+++.+.+.+ ++|++|+|+|++|++|++++++|+.+|++|++++++ ++.+.++++|++
T Consensus 113 ~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~-~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~ 190 (326)
T cd08272 113 KPANLSMREAAALPLVGITAWEGLVDRAAV-QAGQTVLIHGGAGGVGHVAVQLAKAAGARVYATASS-EKAAFARSLGAD 190 (326)
T ss_pred CCCCCCHHHHHHhHHHHHHHHHHHHHhcCC-CCCCEEEEEcCCCcHHHHHHHHHHHcCCEEEEEech-HHHHHHHHcCCC
Confidence 455678889999999999999998777888 899999999999999999999999999999999887 888899999999
Q ss_pred EEEeCCccchhHHHHHHHhcCC--CeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589 158 YVVDHTIRELDRFANQILSYGS--ELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 158 ~vId~~~~~~~d~~~~i~~~~~--gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
.+++... ++.+.+.+.+. ++|+++|++|+.. ...++++++++|+++.++
T Consensus 191 ~~~~~~~----~~~~~~~~~~~~~~~d~v~~~~~~~~---~~~~~~~l~~~g~~v~~~ 241 (326)
T cd08272 191 PIIYYRE----TVVEYVAEHTGGRGFDVVFDTVGGET---LDASFEAVALYGRVVSIL 241 (326)
T ss_pred EEEecch----hHHHHHHHhcCCCCCcEEEECCChHH---HHHHHHHhccCCEEEEEe
Confidence 9988654 24555665543 7999999999877 888999999999999987
No 157
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=99.31 E-value=2.4e-11 Score=127.13 Aligned_cols=118 Identities=21% Similarity=0.097 Sum_probs=100.5
Q ss_pred Hhhhh-hHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecChHHHHHHHhCCCcEEEeCCc
Q psy14589 87 GLAFR-VFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLT-VFASVGCPVGVAKAYGLGADYVVDHTI 164 (655)
Q Consensus 87 AAal~-~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~-Viat~~s~~k~~~a~~LGAd~vId~~~ 164 (655)
+++++ ++++|+++++. ...+ ++|++|+|+|+ |++|++++|+||++|++ |+++++++++.+.++++|++.++++..
T Consensus 107 ~~~~~~~~~~~a~~~~~-~~~~-~~~~~vlI~g~-g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~ 183 (312)
T cd08269 107 GQAFPGEPLGCALNVFR-RGWI-RAGKTVAVIGA-GFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTDDS 183 (312)
T ss_pred hhHHhhhhHHHHHHHHH-hcCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEecCCC
Confidence 34454 88899999986 6777 89999999975 99999999999999998 999999999999899999999998665
Q ss_pred cchhHHHHHHHhcC--CCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589 165 RELDRFANQILSYG--SELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 165 ~~~~d~~~~i~~~~--~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
. ++.+.+.+.+ .++|+++|++|+. . ...++++++++|+++.+|
T Consensus 184 ~---~~~~~l~~~~~~~~vd~vld~~g~~~~---~~~~~~~l~~~g~~~~~g 229 (312)
T cd08269 184 E---AIVERVRELTGGAGADVVIEAVGHQWP---LDLAGELVAERGRLVIFG 229 (312)
T ss_pred c---CHHHHHHHHcCCCCCCEEEECCCCHHH---HHHHHHHhccCCEEEEEc
Confidence 3 5666676654 3799999999875 5 789999999999999987
No 158
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.31 E-value=7.2e-11 Score=123.35 Aligned_cols=129 Identities=20% Similarity=0.126 Sum_probs=103.2
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD 157 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd 157 (655)
++++++..+++++++++.|||+++.....+ ++|++|+|+|++|++|++++++|+++|++|++++.+ ++.+.++++|++
T Consensus 112 ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~-~~g~~vli~g~~g~~g~~~~~la~~~g~~v~~~~~~-~~~~~~~~~g~~ 189 (319)
T cd08267 112 KPEGVSFEEAAALPVAGLTALQALRDAGKV-KPGQRVLINGASGGVGTFAVQIAKALGAHVTGVCST-RNAELVRSLGAD 189 (319)
T ss_pred CCCCCCHHHHHhhhhHHHHHHHHHHHhcCC-CCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCH-HHHHHHHHcCCC
Confidence 455778889999999999999999877777 899999999999999999999999999999998865 788889999999
Q ss_pred EEEeCCccchhHHHHHHHhcCCCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589 158 YVVDHTIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 158 ~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
.+++.... ++. ......+++|++++++|+.. ......+..++++|+++.++
T Consensus 190 ~~~~~~~~---~~~-~~~~~~~~~d~vi~~~~~~~-~~~~~~~~~l~~~g~~i~~g 240 (319)
T cd08267 190 EVIDYTTE---DFV-ALTAGGEKYDVIFDAVGNSP-FSLYRASLALKPGGRYVSVG 240 (319)
T ss_pred EeecCCCC---Ccc-hhccCCCCCcEEEECCCchH-HHHHHhhhccCCCCEEEEec
Confidence 99987653 232 11111237999999999642 01334444599999999987
No 159
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=99.31 E-value=9e-11 Score=121.47 Aligned_cols=126 Identities=21% Similarity=0.134 Sum_probs=107.2
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD 157 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd 157 (655)
++++.+..+++++++...|+++++.+.+.+ ++|++|+|+|++|++|++++++|+++|++|++++.++ +.+.++++|++
T Consensus 113 ~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~-~~~~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~-~~~~~~~~g~~ 190 (309)
T cd05289 113 KPANLSFEEAAALPLAGLTAWQALFELGGL-KAGQTVLIHGAAGGVGSFAVQLAKARGARVIATASAA-NADFLRSLGAD 190 (309)
T ss_pred CCCCCCHHHHHhhhHHHHHHHHHHHhhcCC-CCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecch-hHHHHHHcCCC
Confidence 445678888999999999999998877767 8999999999999999999999999999999988777 78888999999
Q ss_pred EEEeCCccchhHHHHHHHhcCCCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589 158 YVVDHTIRELDRFANQILSYGSELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 158 ~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
.+++.... ++.+ .....++|+++|++|+.. ...++++++++|+++.++
T Consensus 191 ~~~~~~~~---~~~~--~~~~~~~d~v~~~~~~~~---~~~~~~~l~~~g~~v~~g 238 (309)
T cd05289 191 EVIDYTKG---DFER--AAAPGGVDAVLDTVGGET---LARSLALVKPGGRLVSIA 238 (309)
T ss_pred EEEeCCCC---chhh--ccCCCCceEEEECCchHH---HHHHHHHHhcCcEEEEEc
Confidence 99987653 2332 111237999999999887 899999999999999987
No 160
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=99.30 E-value=3e-11 Score=129.60 Aligned_cols=128 Identities=15% Similarity=0.092 Sum_probs=104.3
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcCC-CCCCCCCEEEEEcCCCchHHHHHHHHHHc-CC-eEEEEecChHHHHHHHhC
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSKP-LYTPEPDTLFIIGANRGNGLAAIQVGKAY-GL-TVFASVGCPVGVAKAYGL 154 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~~-~l~~~Gd~VLI~GasGgVG~~avQlAk~~-Ga-~Viat~~s~~k~~~a~~L 154 (655)
++++++..+++.+++++.|||+++.+.+ .+ ++|++|+|+|++|++|++++|+||++ |+ +|+++. ++++.+.++++
T Consensus 119 lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~-~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~~~~~~ 196 (352)
T cd08247 119 KPENISLEEAAAWPLVLGTAYQILEDLGQKL-GPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTC-SSRSAELNKKL 196 (352)
T ss_pred CCCCCCHHHHHHhHHHHHHHHHHHHHhhhcc-CCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEe-ChhHHHHHHHh
Confidence 4567889999999999999999987776 67 89999999999999999999999998 45 677765 45666678899
Q ss_pred CCcEEEeCCccchhH---HHHHH-HhcC--CCeeEEEeCCCcc-hHHHHHHHHHHhc---cccceEEEe
Q psy14589 155 GADYVVDHTIRELDR---FANQI-LSYG--SELDADHPGFTDP-VYRARRKYFADLA---FNYKHFFFF 213 (655)
Q Consensus 155 GAd~vId~~~~~~~d---~~~~i-~~~~--~gvDvV~D~vG~~-~~~~l~~~l~~l~---~gGrlv~v~ 213 (655)
|++.++++.+. + +...+ +..+ +++|+++|++|+. . ...++++++ ++|++|.++
T Consensus 197 g~~~~i~~~~~---~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~---~~~~~~~l~~~~~~G~~v~~~ 259 (352)
T cd08247 197 GADHFIDYDAH---SGVKLLKPVLENVKGQGKFDLILDCVGGYDL---FPHINSILKPKSKNGHYVTIV 259 (352)
T ss_pred CCCEEEecCCC---cccchHHHHHHhhcCCCCceEEEECCCCHHH---HHHHHHHhCccCCCCEEEEEe
Confidence 99999987653 2 33333 3333 3899999999984 6 788899999 999999864
No 161
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=99.29 E-value=2.9e-11 Score=129.25 Aligned_cols=125 Identities=17% Similarity=0.038 Sum_probs=103.5
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecChHHHHHHHhCCC
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLT-VFASVGCPVGVAKAYGLGA 156 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~-Viat~~s~~k~~~a~~LGA 156 (655)
++++++. +.|+++++..||++++. ... ++|++|+|.|+ |++|.+++|+|+++|++ |+++++++++.+.++++|+
T Consensus 133 lp~~~~~-~~a~~~~~~~~a~~~~~--~~~-~~g~~vlI~~~-g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~ 207 (340)
T TIGR00692 133 NPKSIPP-EYATIQEPLGNAVHTVL--AGP-ISGKSVLVTGA-GPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGA 207 (340)
T ss_pred CcCCCCh-HhhhhcchHHHHHHHHH--ccC-CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCC
Confidence 3456666 45678899999999873 345 78999999775 99999999999999996 8888888889999999999
Q ss_pred cEEEeCCccchhHHHHHHHhcC--CCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589 157 DYVVDHTIRELDRFANQILSYG--SELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 157 d~vId~~~~~~~d~~~~i~~~~--~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
+.++++... ++.+.+.+.. .++|+++|++|+. . +..++++++++|+++.+|
T Consensus 208 ~~~v~~~~~---~~~~~l~~~~~~~~~d~vld~~g~~~~---~~~~~~~l~~~g~~v~~g 261 (340)
T TIGR00692 208 TYVVNPFKE---DVVKEVADLTDGEGVDVFLEMSGAPKA---LEQGLQAVTPGGRVSLLG 261 (340)
T ss_pred cEEEccccc---CHHHHHHHhcCCCCCCEEEECCCCHHH---HHHHHHhhcCCCEEEEEc
Confidence 999988764 5666666653 3799999999875 5 788999999999999987
No 162
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.29 E-value=4.9e-11 Score=124.94 Aligned_cols=128 Identities=24% Similarity=0.203 Sum_probs=110.2
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD 157 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd 157 (655)
++++.+..+++++++++.||++++.+.+.+ ++|++|+|+|++|++|++++++|+++|++|+++. ++++.+.+++.|++
T Consensus 110 ip~~~~~~~~a~~~~~~~~a~~~~~~~~~~-~~g~~vlI~g~~~~ig~~~~~~a~~~g~~v~~~~-~~~~~~~~~~~g~~ 187 (325)
T cd08271 110 LPDSLSFEEAAALPCAGLTAYQALFKKLRI-EAGRTILITGGAGGVGSFAVQLAKRAGLRVITTC-SKRNFEYVKSLGAD 187 (325)
T ss_pred CCCCCCHHHHHhhhhhHHHHHHHHHHhcCC-CCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEE-cHHHHHHHHHcCCc
Confidence 446778889999999999999999887887 8999999999999999999999999999998887 67788888999999
Q ss_pred EEEeCCccchhHHHHHHHhcC--CCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589 158 YVVDHTIRELDRFANQILSYG--SELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 158 ~vId~~~~~~~d~~~~i~~~~--~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
.+++.... ++.+.+.+.. .++|++++++|+.. ...++++++++|+++.++
T Consensus 188 ~~~~~~~~---~~~~~~~~~~~~~~~d~vi~~~~~~~---~~~~~~~l~~~G~~v~~~ 239 (325)
T cd08271 188 HVIDYNDE---DVCERIKEITGGRGVDAVLDTVGGET---AAALAPTLAFNGHLVCIQ 239 (325)
T ss_pred EEecCCCc---cHHHHHHHHcCCCCCcEEEECCCcHh---HHHHHHhhccCCEEEEEc
Confidence 99987654 4555566553 37999999999886 678999999999999875
No 163
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=99.29 E-value=4e-11 Score=127.73 Aligned_cols=125 Identities=11% Similarity=0.008 Sum_probs=101.7
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCC
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGA 156 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGA 156 (655)
++++++..+++. +++++|||+++...+.. +|++|+|.|+ |++|++++|+||++|+ +|+++++++++.+.++++|+
T Consensus 136 iP~~~~~~~aa~-~~~~~~a~~~l~~~~~~--~~~~VLI~g~-g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~ 211 (339)
T cd08232 136 LPDGLSLRRAAL-AEPLAVALHAVNRAGDL--AGKRVLVTGA-GPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGA 211 (339)
T ss_pred CcCCCCHHHhhh-cchHHHHHHHHHhcCCC--CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCC
Confidence 456777777754 68889999998665554 8999999875 9999999999999999 89999998988888899999
Q ss_pred cEEEeCCccchhHHHHHHHhcCCCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589 157 DYVVDHTIRELDRFANQILSYGSELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 157 d~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
++++++... ++ .......+++|+++|++|+. . ++..+++|+++|+++.++
T Consensus 212 ~~vi~~~~~---~~-~~~~~~~~~vd~vld~~g~~~~---~~~~~~~L~~~G~~v~~g 262 (339)
T cd08232 212 DETVNLARD---PL-AAYAADKGDFDVVFEASGAPAA---LASALRVVRPGGTVVQVG 262 (339)
T ss_pred CEEEcCCch---hh-hhhhccCCCccEEEECCCCHHH---HHHHHHHHhcCCEEEEEe
Confidence 999988653 22 12222223699999999964 6 789999999999999987
No 164
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=99.28 E-value=4.9e-11 Score=126.43 Aligned_cols=125 Identities=17% Similarity=0.002 Sum_probs=103.8
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecChHHHHHHHhCCC
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLT-VFASVGCPVGVAKAYGLGA 156 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~-Viat~~s~~k~~~a~~LGA 156 (655)
++.++++.+++.+ ++..|+++++ ....+ ++|++|+|+|+ |++|.+++|+||++|++ |+++++++++.+.++++|+
T Consensus 130 lP~~~~~~~aa~~-~~~~~a~~~l-~~~~~-~~g~~vlI~g~-g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~ 205 (334)
T cd08234 130 IPDNLSFEEAALA-EPLSCAVHGL-DLLGI-KPGDSVLVFGA-GPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGA 205 (334)
T ss_pred CcCCCCHHHHhhh-hHHHHHHHHH-HhcCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCC
Confidence 4566778877665 8888999998 66787 89999999985 99999999999999997 8889899999999999999
Q ss_pred cEEEeCCccchhHHHHHHHhc-CCCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589 157 DYVVDHTIRELDRFANQILSY-GSELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 157 d~vId~~~~~~~d~~~~i~~~-~~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
+.++++.+. +.... +.. .+++|+++|++|+. . +..++++++++|+++.++
T Consensus 206 ~~~~~~~~~---~~~~~-~~~~~~~vd~v~~~~~~~~~---~~~~~~~l~~~G~~v~~g 257 (334)
T cd08234 206 TETVDPSRE---DPEAQ-KEDNPYGFDVVIEATGVPKT---LEQAIEYARRGGTVLVFG 257 (334)
T ss_pred eEEecCCCC---CHHHH-HHhcCCCCcEEEECCCChHH---HHHHHHHHhcCCEEEEEe
Confidence 999988754 33333 222 24799999999865 5 789999999999999987
No 165
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=99.26 E-value=6.5e-11 Score=126.55 Aligned_cols=124 Identities=19% Similarity=0.063 Sum_probs=102.6
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCC
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGA 156 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGA 156 (655)
++++++. +++++++++.++++++. ... ++|++|+|.|+ |++|++++|+||++|+ +|++++++++|.+.++++|+
T Consensus 135 lP~~~~~-~~a~~~~~~~~a~~~~~--~~~-~~g~~vlV~g~-g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~ 209 (341)
T cd05281 135 NDKDIPP-EIASIQEPLGNAVHTVL--AGD-VSGKSVLITGC-GPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGA 209 (341)
T ss_pred CcCCCCH-HHhhhhhHHHHHHHHHH--hcC-CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCc
Confidence 4456666 56678888999998875 344 68999999875 9999999999999999 79889888899999999999
Q ss_pred cEEEeCCccchhHHHHHHHhcC--CCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589 157 DYVVDHTIRELDRFANQILSYG--SELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 157 d~vId~~~~~~~d~~~~i~~~~--~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
++++++... ++. .+.+.. +++|+++|++|+. . ...++++++++|+++.++
T Consensus 210 ~~~~~~~~~---~~~-~~~~~~~~~~vd~vld~~g~~~~---~~~~~~~l~~~G~~v~~g 262 (341)
T cd05281 210 DVVINPREE---DVV-EVKSVTDGTGVDVVLEMSGNPKA---IEQGLKALTPGGRVSILG 262 (341)
T ss_pred ceeeCcccc---cHH-HHHHHcCCCCCCEEEECCCCHHH---HHHHHHHhccCCEEEEEc
Confidence 999987653 455 565553 3899999999875 5 789999999999999887
No 166
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.24 E-value=7.2e-11 Score=121.99 Aligned_cols=120 Identities=19% Similarity=0.024 Sum_probs=99.9
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecChHHHHHHHhCC-
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLT-VFASVGCPVGVAKAYGLG- 155 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~-Viat~~s~~k~~~a~~LG- 155 (655)
+++++++.+++++ ++++|||+++. .+.+ ++|++|+|+|+ |++|++++|+||++|++ |+++++++++.+.++++|
T Consensus 68 ip~~l~~~~aa~~-~~~~ta~~~~~-~~~~-~~g~~vlI~g~-g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~~~~~~g~ 143 (277)
T cd08255 68 LPDGLPPERAALT-ALAATALNGVR-DAEP-RLGERVAVVGL-GLVGLLAAQLAKAAGAREVVGVDPDAARRELAEALGP 143 (277)
T ss_pred CcCCCCHHHhHHH-HHHHHHHHHHH-hcCC-CCCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEECCCHHHHHHHHHcCC
Confidence 4566788888888 89999999985 5777 89999999985 99999999999999998 999999999999999999
Q ss_pred CcEEEeCCccchhHHHHHHHhcCCCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589 156 ADYVVDHTIRELDRFANQILSYGSELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 156 Ad~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
++.+++... .. . ...++|+++|++|.. . ...++++++++|+++.+|
T Consensus 144 ~~~~~~~~~----~~---~--~~~~~d~vl~~~~~~~~---~~~~~~~l~~~g~~~~~g 190 (277)
T cd08255 144 ADPVAADTA----DE---I--GGRGADVVIEASGSPSA---LETALRLLRDRGRVVLVG 190 (277)
T ss_pred Cccccccch----hh---h--cCCCCCEEEEccCChHH---HHHHHHHhcCCcEEEEEe
Confidence 676665432 11 1 123799999998865 5 789999999999999987
No 167
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=99.24 E-value=7.4e-11 Score=124.56 Aligned_cols=119 Identities=14% Similarity=-0.025 Sum_probs=97.0
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD 157 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd 157 (655)
++++++.++++.+ .+..++|+.+ +...+ ++|++|+|+| +|++|++++|+||.+|++|++++.++++++.++++|++
T Consensus 126 lP~~~~~~~aa~~-~~~~~~~~~~-~~~~~-~~g~~vlV~g-~g~vg~~~~q~a~~~G~~vi~~~~~~~~~~~~~~~g~~ 201 (319)
T cd08242 126 VPDLVPDEQAVFA-EPLAAALEIL-EQVPI-TPGDKVAVLG-DGKLGLLIAQVLALTGPDVVLVGRHSEKLALARRLGVE 201 (319)
T ss_pred CcCCCCHHHhhhh-hHHHHHHHHH-HhcCC-CCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCc
Confidence 4566777776653 4555666655 56677 8999999997 49999999999999999999999999999999999999
Q ss_pred EEEeCCccchhHHHHHHHhcCCCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589 158 YVVDHTIRELDRFANQILSYGSELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 158 ~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
.++++.. . ....++|+++|++|+. . ++.++++++++|+++.++
T Consensus 202 ~~~~~~~----~------~~~~~~d~vid~~g~~~~---~~~~~~~l~~~g~~v~~~ 245 (319)
T cd08242 202 TVLPDEA----E------SEGGGFDVVVEATGSPSG---LELALRLVRPRGTVVLKS 245 (319)
T ss_pred EEeCccc----c------ccCCCCCEEEECCCChHH---HHHHHHHhhcCCEEEEEc
Confidence 9887643 1 1123799999999885 6 788999999999999865
No 168
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.22 E-value=1.8e-10 Score=121.34 Aligned_cols=128 Identities=19% Similarity=0.140 Sum_probs=106.4
Q ss_pred CCCCCCHHhHhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecChHHHHHHHhCCC
Q psy14589 78 LLSSRDFLAGLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAY-GLTVFASVGCPVGVAKAYGLGA 156 (655)
Q Consensus 78 l~~~~s~~eAAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~-Ga~Viat~~s~~k~~~a~~LGA 156 (655)
+++++++.+++.++++..|||+++.+.+.+ ++|++|+|+|++|++|++++|+|+++ +..++.+ ..+++.+.++++|+
T Consensus 107 ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~-~~~~~vli~g~~g~~g~~~~~~a~~~~~~~~~~~-~~~~~~~~~~~~g~ 184 (337)
T cd08275 107 LPDGMSFEEAAAFPVNYLTAYYALFELGNL-RPGQSVLVHSAAGGVGLAAGQLCKTVPNVTVVGT-ASASKHEALKENGV 184 (337)
T ss_pred CCCCCCHHHHhhhhHHHHHHHHHHHHhhCC-CCCCEEEEEcCcchHHHHHHHHHHHccCcEEEEe-CCHHHHHHHHHcCC
Confidence 445678889999999999999998877888 89999999999999999999999999 4444433 24567888889999
Q ss_pred cEEEeCCccchhHHHHHHHhcC-CCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589 157 DYVVDHTIRELDRFANQILSYG-SELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 157 d~vId~~~~~~~d~~~~i~~~~-~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
+.+++.... ++.+.+.+.+ +++|+++|++|+.. ...++++++++|+++.+|
T Consensus 185 ~~~~~~~~~---~~~~~~~~~~~~~~d~v~~~~g~~~---~~~~~~~l~~~g~~v~~g 236 (337)
T cd08275 185 THVIDYRTQ---DYVEEVKKISPEGVDIVLDALGGED---TRKSYDLLKPMGRLVVYG 236 (337)
T ss_pred cEEeeCCCC---cHHHHHHHHhCCCceEEEECCcHHH---HHHHHHhhccCcEEEEEe
Confidence 999987754 4555555543 37999999999887 889999999999999987
No 169
>KOG2797|consensus
Probab=99.12 E-value=8.9e-11 Score=120.49 Aligned_cols=95 Identities=20% Similarity=0.312 Sum_probs=79.9
Q ss_pred hhheeeccccccccCCCCCCCCeEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCC---------CCCcceEEEE
Q psy14589 239 FFYFLLLSQPLIQSCHSCPFSLFDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSST---------RIENNYEFMV 309 (655)
Q Consensus 239 ~~~F~ll~~p~~~~~~~~~~~~ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~---------~~~~~Y~FfV 309 (655)
-|+|++|++.+.. .......|+||+|.... .||.|.++|++|+-++||||+|||||.. .+.|+|.|||
T Consensus 261 vTRFLmLar~p~i--p~t~rl~ktsivf~~~~-gp~vLfkvl~vfa~r~inltkIesRP~h~~p~r~v~~~k~f~ylFyi 337 (377)
T KOG2797|consen 261 VTRFLMLAREPII--PDTDRLFKTSIVFFREK-GPGVLFKVLSVFAFRSINLTKIESRPFHNRPLRVVDDSKNFEYLFYI 337 (377)
T ss_pred eeEEEEEeccCCC--CCCCccceeeEEEEeec-CCchHHHHHHHHHhhhceeeeeecccccCCCcccccccccccEEEEE
Confidence 3688999886432 12223348999988766 8999999999999999999999999944 4568999999
Q ss_pred EecC---CchHHHHHHHHHccCCcEEEecC
Q psy14589 310 ECAP---GGDLSSVIESLRSSCSYINIISR 336 (655)
Q Consensus 310 d~eg---~~~v~~~l~~L~~~~~~v~iLGs 336 (655)
|+|. +++.++++.++...++.+++||+
T Consensus 338 dfeasmae~~aq~al~~~~e~~sflrvlGs 367 (377)
T KOG2797|consen 338 DFEASMAEPRAQNALGEVQEFTSFLRVLGS 367 (377)
T ss_pred EEEeccCcHHHHHHHHHHHHHHHHHHHhcC
Confidence 9987 78899999999999999999999
No 170
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=98.90 E-value=7.1e-09 Score=114.16 Aligned_cols=101 Identities=11% Similarity=-0.068 Sum_probs=80.7
Q ss_pred HHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHh
Q psy14589 97 QYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILS 176 (655)
Q Consensus 97 A~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~ 176 (655)
++.++.+..++.-+|++|+|.|+ |+||+.+++.+|.+|++|++++.++.|++.++.+|++.+ + ..+.+.
T Consensus 188 ~~~~i~r~t~~~l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~~~G~~~~-~--------~~e~v~- 256 (413)
T cd00401 188 LIDGIKRATDVMIAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICALQAAMEGYEVM-T--------MEEAVK- 256 (413)
T ss_pred hHHHHHHhcCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHHHHHhcCCEEc-c--------HHHHHc-
Confidence 45555544333358999999999 999999999999999999999999999999999999543 2 112222
Q ss_pred cCCCeeEEEeCCCcchHHHHHHH-HHHhccccceEEEe
Q psy14589 177 YGSELDADHPGFTDPVYRARRKY-FADLAFNYKHFFFF 213 (655)
Q Consensus 177 ~~~gvDvV~D~vG~~~~~~l~~~-l~~l~~gGrlv~v~ 213 (655)
++|+|++|+|... .++.. ++.+++||+++.+|
T Consensus 257 ---~aDVVI~atG~~~--~i~~~~l~~mk~GgilvnvG 289 (413)
T cd00401 257 ---EGDIFVTTTGNKD--IITGEHFEQMKDGAIVCNIG 289 (413)
T ss_pred ---CCCEEEECCCCHH--HHHHHHHhcCCCCcEEEEeC
Confidence 5799999999872 26665 99999999999998
No 171
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=98.89 E-value=1.1e-08 Score=115.22 Aligned_cols=104 Identities=20% Similarity=0.197 Sum_probs=81.5
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEE-EeCCccc----------hhHHHHHHHhc
Q psy14589 109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYV-VDHTIRE----------LDRFANQILSY 177 (655)
Q Consensus 109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~v-Id~~~~~----------~~d~~~~i~~~ 177 (655)
.+|++|+|.|+ |++|+++++.||.+||+|++++.++++++.++++||+.+ +|..+.. .+++.+...+.
T Consensus 163 ~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~~ 241 (509)
T PRK09424 163 VPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMAL 241 (509)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHHH
Confidence 58999999999 999999999999999999999999999999999999955 6653310 01222222221
Q ss_pred ----CCCeeEEEeCCCcch---HHHH-HHHHHHhccccceEEEe
Q psy14589 178 ----GSELDADHPGFTDPV---YRAR-RKYFADLAFNYKHFFFF 213 (655)
Q Consensus 178 ----~~gvDvV~D~vG~~~---~~~l-~~~l~~l~~gGrlv~v~ 213 (655)
.+++|+||+|+|.+. ...+ +++++.+++||+++.++
T Consensus 242 ~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg 285 (509)
T PRK09424 242 FAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLA 285 (509)
T ss_pred HHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEc
Confidence 247999999999631 1123 89999999999999987
No 172
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.15 E-value=2.6e-05 Score=88.22 Aligned_cols=100 Identities=20% Similarity=0.249 Sum_probs=76.5
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEE-EeCCcc----------chhHHHHH----H
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYV-VDHTIR----------ELDRFANQ----I 174 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~v-Id~~~~----------~~~d~~~~----i 174 (655)
++++|+|.|+ |.+|++++++|+.+|++|+++++++++++.++.+|++.+ ++..+. -.++..+. .
T Consensus 163 p~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~~ 241 (511)
T TIGR00561 163 PPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMELF 241 (511)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHHH
Confidence 6899999999 999999999999999999999999999999999999874 332110 00122221 2
Q ss_pred HhcCCCeeEEEeCC---Ccc----hHHHHHHHHHHhccccceEEEe
Q psy14589 175 LSYGSELDADHPGF---TDP----VYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 175 ~~~~~gvDvV~D~v---G~~----~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
.+...++|+|++|+ |.+ . .++.++.+|+|+.+|-+.
T Consensus 242 ~e~~~~~DIVI~TalipG~~aP~Li---t~emv~~MKpGsvIVDlA 284 (511)
T TIGR00561 242 AAQAKEVDIIITTALIPGKPAPKLI---TEEMVDSMKAGSVIVDLA 284 (511)
T ss_pred HHHhCCCCEEEECcccCCCCCCeee---hHHHHhhCCCCCEEEEee
Confidence 22234799999999 543 4 578899999999988774
No 173
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=98.14 E-value=1.3e-05 Score=88.31 Aligned_cols=102 Identities=12% Similarity=-0.050 Sum_probs=77.6
Q ss_pred HHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHH
Q psy14589 96 TQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQIL 175 (655)
Q Consensus 96 TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~ 175 (655)
+++.++.+..++...|++|+|.|. |.||+.+++.+|.+|++|++++.++.+...++..|+. +.+ ..+.+.
T Consensus 180 s~~~~i~r~t~~~l~Gk~VvViG~-G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~--------leeal~ 249 (406)
T TIGR00936 180 STIDGILRATNLLIAGKTVVVAGY-GWCGKGIAMRARGMGARVIVTEVDPIRALEAAMDGFR-VMT--------MEEAAK 249 (406)
T ss_pred hHHHHHHHhcCCCCCcCEEEEECC-CHHHHHHHHHHhhCcCEEEEEeCChhhHHHHHhcCCE-eCC--------HHHHHh
Confidence 345555554332258999999999 9999999999999999999999888887777778873 321 112222
Q ss_pred hcCCCeeEEEeCCCcchHHHHH-HHHHHhccccceEEEe
Q psy14589 176 SYGSELDADHPGFTDPVYRARR-KYFADLAFNYKHFFFF 213 (655)
Q Consensus 176 ~~~~gvDvV~D~vG~~~~~~l~-~~l~~l~~gGrlv~v~ 213 (655)
+.|+|++++|... .++ ..+..+++|+.++.+|
T Consensus 250 ----~aDVVItaTG~~~--vI~~~~~~~mK~GailiN~G 282 (406)
T TIGR00936 250 ----IGDIFITATGNKD--VIRGEHFENMKDGAIVANIG 282 (406)
T ss_pred ----cCCEEEECCCCHH--HHHHHHHhcCCCCcEEEEEC
Confidence 5799999999873 144 4888999999999887
No 174
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.12 E-value=1.4e-05 Score=88.60 Aligned_cols=103 Identities=10% Similarity=-0.090 Sum_probs=78.9
Q ss_pred HHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHH
Q psy14589 95 STQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQI 174 (655)
Q Consensus 95 ~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i 174 (655)
-.+|.++.+..++.-.|++|+|.|. |.+|..+++.++.+|++|+++++++.+...+...|++ +.+ +.+.+
T Consensus 196 ~s~~~ai~rat~~~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~~G~~-v~~--------l~eal 265 (425)
T PRK05476 196 ESLLDGIKRATNVLIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICALQAAMDGFR-VMT--------MEEAA 265 (425)
T ss_pred hhhHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhHHHHhcCCE-ecC--------HHHHH
Confidence 4456766655344238999999999 9999999999999999999999988887777777865 322 22222
Q ss_pred HhcCCCeeEEEeCCCcchHHHHH-HHHHHhccccceEEEe
Q psy14589 175 LSYGSELDADHPGFTDPVYRARR-KYFADLAFNYKHFFFF 213 (655)
Q Consensus 175 ~~~~~gvDvV~D~vG~~~~~~l~-~~l~~l~~gGrlv~v~ 213 (655)
. ++|+|++++|... .++ ..++.+++|+.++.+|
T Consensus 266 ~----~aDVVI~aTG~~~--vI~~~~~~~mK~GailiNvG 299 (425)
T PRK05476 266 E----LGDIFVTATGNKD--VITAEHMEAMKDGAILANIG 299 (425)
T ss_pred h----CCCEEEECCCCHH--HHHHHHHhcCCCCCEEEEcC
Confidence 2 5899999999762 154 6888999999998887
No 175
>PLN02494 adenosylhomocysteinase
Probab=98.02 E-value=2.8e-05 Score=86.72 Aligned_cols=101 Identities=13% Similarity=-0.071 Sum_probs=77.8
Q ss_pred HHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhc
Q psy14589 98 YIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSY 177 (655)
Q Consensus 98 ~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~ 177 (655)
+.++.+..++.-.|++|+|.|. |.||+.+++.++.+|++|+++++++.+...+...|+..+ + +.+.+.
T Consensus 241 ~d~i~r~t~i~LaGKtVvViGy-G~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~~~G~~vv-~--------leEal~-- 308 (477)
T PLN02494 241 PDGLMRATDVMIAGKVAVICGY-GDVGKGCAAAMKAAGARVIVTEIDPICALQALMEGYQVL-T--------LEDVVS-- 308 (477)
T ss_pred HHHHHHhcCCccCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhHHHHhcCCeec-c--------HHHHHh--
Confidence 4454444333358999999999 999999999999999999999998887777888887632 1 222232
Q ss_pred CCCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589 178 GSELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 178 ~~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
..|+|++++|... -.....++.+++||.++.+|
T Consensus 309 --~ADVVI~tTGt~~-vI~~e~L~~MK~GAiLiNvG 341 (477)
T PLN02494 309 --EADIFVTTTGNKD-IIMVDHMRKMKNNAIVCNIG 341 (477)
T ss_pred --hCCEEEECCCCcc-chHHHHHhcCCCCCEEEEcC
Confidence 4699999999872 00378999999999999987
No 176
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=97.79 E-value=0.00024 Score=75.51 Aligned_cols=91 Identities=12% Similarity=0.149 Sum_probs=72.0
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCCC
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGFT 189 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG 189 (655)
.|.+|+|.|+ |++|..+++.++.+|++|++.++++++.+.++.+|+..+ ... ++.+.+. ++|+||+|++
T Consensus 151 ~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~~G~~~~-~~~-----~l~~~l~----~aDiVI~t~p 219 (296)
T PRK08306 151 HGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLARITEMGLSPF-HLS-----ELAEEVG----KIDIIFNTIP 219 (296)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeee-cHH-----HHHHHhC----CCCEEEECCC
Confidence 7999999999 999999999999999999999999988888899997643 221 2333332 6899999997
Q ss_pred cchHHHHHHHHHHhccccceEEEe
Q psy14589 190 DPVYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 190 ~~~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
... ..+..++.+++++.+|-+.
T Consensus 220 ~~~--i~~~~l~~~~~g~vIIDla 241 (296)
T PRK08306 220 ALV--LTKEVLSKMPPEALIIDLA 241 (296)
T ss_pred hhh--hhHHHHHcCCCCcEEEEEc
Confidence 663 1366778899988777664
No 177
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.77 E-value=0.00025 Score=71.44 Aligned_cols=102 Identities=16% Similarity=0.044 Sum_probs=68.2
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH-H---hCCCcEEE--eCCccchhHHHH---HHHhcCCC
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA-Y---GLGADYVV--DHTIRELDRFAN---QILSYGSE 180 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a-~---~LGAd~vI--d~~~~~~~d~~~---~i~~~~~g 180 (655)
.|++|+|+|++|+||..+++.+...|++|+++++++++.+.+ . ..|..+.+ |..+. +++.+ .+.+..++
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~--~~~~~~~~~~~~~~~~ 81 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSST--ESARNVIEKAAKVLNA 81 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCH--HHHHHHHHHHHHHhCC
Confidence 578999999999999999999999999999999998877655 2 22332333 33332 12322 22222346
Q ss_pred eeEEEeCCCcch---------------------HHHHHHHHHHhccccceEEEe
Q psy14589 181 LDADHPGFTDPV---------------------YRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 181 vDvV~D~vG~~~---------------------~~~l~~~l~~l~~gGrlv~v~ 213 (655)
+|.++.++|... ...++..++.++++|++|.++
T Consensus 82 id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~s 135 (238)
T PRK05786 82 IDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVS 135 (238)
T ss_pred CCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEe
Confidence 899999887421 112344555667778888776
No 178
>PRK05693 short chain dehydrogenase; Provisional
Probab=97.74 E-value=0.00037 Score=72.25 Aligned_cols=79 Identities=24% Similarity=0.199 Sum_probs=58.1
Q ss_pred CEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEE-EeCCccc-hhHHHHHHHhcCCCeeEEEeCCC
Q psy14589 112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYV-VDHTIRE-LDRFANQILSYGSELDADHPGFT 189 (655)
Q Consensus 112 d~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~v-Id~~~~~-~~d~~~~i~~~~~gvDvV~D~vG 189 (655)
++++|+||+|++|..+++.+...|++|+++++++++.+.+.+.|...+ .|..+.. ..++.+.+.+..+++|+++.+.|
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag 81 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNAG 81 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence 479999999999999999888889999999999888777776676544 4665531 11222333333347999999998
Q ss_pred c
Q psy14589 190 D 190 (655)
Q Consensus 190 ~ 190 (655)
.
T Consensus 82 ~ 82 (274)
T PRK05693 82 Y 82 (274)
T ss_pred C
Confidence 4
No 179
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=97.68 E-value=0.00032 Score=78.56 Aligned_cols=99 Identities=12% Similarity=-0.054 Sum_probs=75.1
Q ss_pred HHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcC
Q psy14589 99 IRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYG 178 (655)
Q Consensus 99 ~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~ 178 (655)
.++.+..+..-.|++|+|.|. |.||..+++.++.+|++|+++++++.+...+...|+..+ ++.+.++
T Consensus 242 d~~~R~~~~~LaGKtVgVIG~-G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~~~G~~~~---------~leell~--- 308 (476)
T PTZ00075 242 DGIFRATDVMIAGKTVVVCGY-GDVGKGCAQALRGFGARVVVTEIDPICALQAAMEGYQVV---------TLEDVVE--- 308 (476)
T ss_pred HHHHHhcCCCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHhcCceec---------cHHHHHh---
Confidence 555554443248999999999 999999999999999999999888777655666676432 1222232
Q ss_pred CCeeEEEeCCCcchHHHH-HHHHHHhccccceEEEe
Q psy14589 179 SELDADHPGFTDPVYRAR-RKYFADLAFNYKHFFFF 213 (655)
Q Consensus 179 ~gvDvV~D~vG~~~~~~l-~~~l~~l~~gGrlv~v~ 213 (655)
..|+|+.++|... .+ ...++.|++|+.++-+|
T Consensus 309 -~ADIVI~atGt~~--iI~~e~~~~MKpGAiLINvG 341 (476)
T PTZ00075 309 -TADIFVTATGNKD--IITLEHMRRMKNNAIVGNIG 341 (476)
T ss_pred -cCCEEEECCCccc--ccCHHHHhccCCCcEEEEcC
Confidence 5799999998762 14 48999999999999987
No 180
>PRK08818 prephenate dehydrogenase; Provisional
Probab=97.63 E-value=9.5e-05 Score=80.84 Aligned_cols=52 Identities=27% Similarity=0.319 Sum_probs=47.8
Q ss_pred CeEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecC
Q psy14589 260 LFDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAP 313 (655)
Q Consensus 260 ~ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg 313 (655)
.-+++.|++++|+||+|+++|..|+.++|||++||| ++.+.|+|.||||+++
T Consensus 294 ~~~~l~~~v~~d~pG~L~~vl~~la~~~INit~Ies--~~~r~~~y~f~i~~~~ 345 (370)
T PRK08818 294 EPLTLSVYLPEDRPGSLRTLLHVFEQHGVNLSSIHS--SRTPAGELHFRIGFEP 345 (370)
T ss_pred cceEEEEECCCCCCChHHHHHHHHHHcCcccceEEE--ecccCceEEEEEEEec
Confidence 367899999734999999999999999999999999 8889999999999998
No 181
>PRK12742 oxidoreductase; Provisional
Probab=97.61 E-value=0.00057 Score=68.80 Aligned_cols=78 Identities=19% Similarity=0.175 Sum_probs=53.9
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEec-ChHHHHHH-HhCCCcEE-EeCCccchhHHHHHHHhcCCCeeEEEe
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVG-CPVGVAKA-YGLGADYV-VDHTIRELDRFANQILSYGSELDADHP 186 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~-s~~k~~~a-~~LGAd~v-Id~~~~~~~d~~~~i~~~~~gvDvV~D 186 (655)
.|++|+|+||+|+||..+++.....|++|+.+.+ ++++.+.+ .++++..+ .|..+. +.+.+.+.+ .+++|+++.
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~--~~~~~~~~~-~~~id~li~ 81 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADR--DAVIDVVRK-SGALDILVV 81 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCH--HHHHHHHHH-hCCCcEEEE
Confidence 5889999999999999999988889999987754 44444443 45666543 344332 234444433 246899999
Q ss_pred CCCc
Q psy14589 187 GFTD 190 (655)
Q Consensus 187 ~vG~ 190 (655)
++|.
T Consensus 82 ~ag~ 85 (237)
T PRK12742 82 NAGI 85 (237)
T ss_pred CCCC
Confidence 9875
No 182
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=97.60 E-value=0.0003 Score=73.40 Aligned_cols=101 Identities=16% Similarity=0.113 Sum_probs=68.6
Q ss_pred CCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecChHHHHHHHh----CCCcEEEeCCccchhHHHHHHHhcC
Q psy14589 105 PLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL--TVFASVGCPVGVAKAYG----LGADYVVDHTIRELDRFANQILSYG 178 (655)
Q Consensus 105 ~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga--~Viat~~s~~k~~~a~~----LGAd~vId~~~~~~~d~~~~i~~~~ 178 (655)
+.+ ++|++||..|+ |+ |..++++++..|. +|++++.+++.++.+++ .|.+.+-.. .. ++. .+.-..
T Consensus 73 ~~~-~~g~~VLDiG~-G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~~-~~---d~~-~l~~~~ 144 (272)
T PRK11873 73 AEL-KPGETVLDLGS-GG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVEFR-LG---EIE-ALPVAD 144 (272)
T ss_pred ccC-CCCCEEEEeCC-CC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEEE-Ec---chh-hCCCCC
Confidence 456 79999999998 55 8888888888775 69999999998888875 454433111 11 221 111112
Q ss_pred CCeeEEEeCCC-c---chHHHHHHHHHHhccccceEEEe
Q psy14589 179 SELDADHPGFT-D---PVYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 179 ~gvDvV~D~vG-~---~~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
+.+|+|+.... . +..+.++.+.++|++||++++..
T Consensus 145 ~~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~ 183 (272)
T PRK11873 145 NSVDVIISNCVINLSPDKERVFKEAFRVLKPGGRFAISD 183 (272)
T ss_pred CceeEEEEcCcccCCCCHHHHHHHHHHHcCCCcEEEEEE
Confidence 37999885431 1 11234899999999999999876
No 183
>PRK06182 short chain dehydrogenase; Validated
Probab=97.59 E-value=0.00094 Score=69.15 Aligned_cols=79 Identities=19% Similarity=0.184 Sum_probs=58.4
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEE-EeCCccchhHHHH---HHHhcCCCeeEEE
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYV-VDHTIRELDRFAN---QILSYGSELDADH 185 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~v-Id~~~~~~~d~~~---~i~~~~~gvDvV~ 185 (655)
++.+++|+|++|++|..+++.....|++|+++++++++++.+.+.++..+ .|..+. +++.+ .+.+..+++|+++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~--~~~~~~~~~~~~~~~~id~li 79 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLASLGVHPLSLDVTDE--ASIKAAVDTIIAEEGRIDVLV 79 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhCCCeEEEeeCCCH--HHHHHHHHHHHHhcCCCCEEE
Confidence 46789999999999999999888889999999999888776665565443 455443 23333 3333344799999
Q ss_pred eCCCc
Q psy14589 186 PGFTD 190 (655)
Q Consensus 186 D~vG~ 190 (655)
.+.|.
T Consensus 80 ~~ag~ 84 (273)
T PRK06182 80 NNAGY 84 (273)
T ss_pred ECCCc
Confidence 99984
No 184
>PRK08324 short chain dehydrogenase; Validated
Probab=97.52 E-value=0.00068 Score=80.07 Aligned_cols=102 Identities=16% Similarity=0.019 Sum_probs=69.6
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hCCC-----cEEEeCCccchhHHHH---HHHhcCCC
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GLGA-----DYVVDHTIRELDRFAN---QILSYGSE 180 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~LGA-----d~vId~~~~~~~d~~~---~i~~~~~g 180 (655)
+|++|+|+||+|+||..+++.....|++|+++++++++.+.+. .++. ....|.++. +++.+ .+.+..++
T Consensus 421 ~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~--~~v~~~~~~~~~~~g~ 498 (681)
T PRK08324 421 AGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDE--AAVQAAFEEAALAFGG 498 (681)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCH--HHHHHHHHHHHHHcCC
Confidence 6899999999999999999999899999999999988766553 3443 112354442 22322 23333457
Q ss_pred eeEEEeCCCcc-----------------------hHHHHHHHHHHhcc---ccceEEEe
Q psy14589 181 LDADHPGFTDP-----------------------VYRARRKYFADLAF---NYKHFFFF 213 (655)
Q Consensus 181 vDvV~D~vG~~-----------------------~~~~l~~~l~~l~~---gGrlv~v~ 213 (655)
+|++++++|.. .+..++.+++.+++ +|++|.++
T Consensus 499 iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vs 557 (681)
T PRK08324 499 VDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIA 557 (681)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEEC
Confidence 99999999831 11224455666665 67888776
No 185
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.52 E-value=0.00047 Score=70.66 Aligned_cols=80 Identities=19% Similarity=0.098 Sum_probs=60.5
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH-HhCCC----cEEEeCCccchhHHHHHHH---hcCCCe
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA-YGLGA----DYVVDHTIRELDRFANQIL---SYGSEL 181 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a-~~LGA----d~vId~~~~~~~d~~~~i~---~~~~gv 181 (655)
.++.++|+|||+|+|.+.++.....|++|+.++|+.++++.+ .++|. -.++|.++. ++..+.+. +.-+.+
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~--~~~~~~i~~~~~~~g~i 82 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDR--AAVEAAIEALPEEFGRI 82 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCH--HHHHHHHHHHHHhhCcc
Confidence 568899999999999999999999999999999999999876 46883 223565553 13333333 333479
Q ss_pred eEEEeCCCcc
Q psy14589 182 DADHPGFTDP 191 (655)
Q Consensus 182 DvV~D~vG~~ 191 (655)
|+.++..|-.
T Consensus 83 DiLvNNAGl~ 92 (246)
T COG4221 83 DILVNNAGLA 92 (246)
T ss_pred cEEEecCCCC
Confidence 9999988754
No 186
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=97.52 E-value=0.001 Score=72.97 Aligned_cols=97 Identities=13% Similarity=0.023 Sum_probs=69.2
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCC
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GLGADYVVDHTIRELDRFANQILSYGSELDADHPGF 188 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~v 188 (655)
++.+|+|.|+ |.+|+.+++.++.+|++|+++++++++++.+. .+|+....++.+. +++.+.+. .+|+|++|+
T Consensus 166 ~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~--~~l~~~l~----~aDvVI~a~ 238 (370)
T TIGR00518 166 EPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNA--YEIEDAVK----RADLLIGAV 238 (370)
T ss_pred CCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCH--HHHHHHHc----cCCEEEEcc
Confidence 4556999999 99999999999999999999999988877765 4565433333321 23444333 589999998
Q ss_pred ---CcchHH-HHHHHHHHhccccceEEEe
Q psy14589 189 ---TDPVYR-ARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 189 ---G~~~~~-~l~~~l~~l~~gGrlv~v~ 213 (655)
|..... .....++.+++++.++-++
T Consensus 239 ~~~g~~~p~lit~~~l~~mk~g~vIvDva 267 (370)
T TIGR00518 239 LIPGAKAPKLVSNSLVAQMKPGAVIVDVA 267 (370)
T ss_pred ccCCCCCCcCcCHHHHhcCCCCCEEEEEe
Confidence 432100 0367788899998888775
No 187
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=97.50 E-value=0.00077 Score=67.20 Aligned_cols=100 Identities=11% Similarity=0.049 Sum_probs=69.9
Q ss_pred CCCCCCCEEEEEcCCCchHHHHHHHHHHcC--CeEEEEecChHHHHHHH----hCC-CcEEEeCCccchhHHHHHHHhcC
Q psy14589 106 LYTPEPDTLFIIGANRGNGLAAIQVGKAYG--LTVFASVGCPVGVAKAY----GLG-ADYVVDHTIRELDRFANQILSYG 178 (655)
Q Consensus 106 ~l~~~Gd~VLI~GasGgVG~~avQlAk~~G--a~Viat~~s~~k~~~a~----~LG-Ad~vId~~~~~~~d~~~~i~~~~ 178 (655)
.+ ++|++|+-.|+ |. |.+++++|+..+ .+|++++.+++..+.++ .+| .+.+..... +..+.+....
T Consensus 37 ~~-~~~~~vlDlG~-Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~~----d~~~~l~~~~ 109 (198)
T PRK00377 37 RL-RKGDMILDIGC-GT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIKG----EAPEILFTIN 109 (198)
T ss_pred CC-CCcCEEEEeCC-cC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEEe----chhhhHhhcC
Confidence 55 78999999998 55 999999998864 58999999998877653 466 444322221 2333333333
Q ss_pred CCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEE
Q psy14589 179 SELDADHPGFTDP-VYRARRKYFADLAFNYKHFFF 212 (655)
Q Consensus 179 ~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v 212 (655)
+.+|.|+...+.. ..+.++.+.+.|++||++++.
T Consensus 110 ~~~D~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~~ 144 (198)
T PRK00377 110 EKFDRIFIGGGSEKLKEIISASWEIIKKGGRIVID 144 (198)
T ss_pred CCCCEEEECCCcccHHHHHHHHHHHcCCCcEEEEE
Confidence 4799999865543 224478888999999999863
No 188
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=97.49 E-value=0.00044 Score=74.04 Aligned_cols=88 Identities=17% Similarity=0.053 Sum_probs=63.2
Q ss_pred hHHHHHHHHhhcC----CCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHH-HHHHhCCCcEEEeCCcc
Q psy14589 92 VFHSTQYIRHPSK----PLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGV-AKAYGLGADYVVDHTIR 165 (655)
Q Consensus 92 ~a~~TA~~aL~~~----~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~-~~a~~LGAd~vId~~~~ 165 (655)
.+.+++++++... +.+ +|++|+|.|+ |.+|..+++.++..|+ +|+++++++++. +.++++|++ +++..
T Consensus 157 ~~~sv~~~Av~~a~~~~~~l--~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~~-~~~~~-- 230 (311)
T cd05213 157 GAVSISSAAVELAEKIFGNL--KGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKELGGN-AVPLD-- 230 (311)
T ss_pred CCcCHHHHHHHHHHHHhCCc--cCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCCe-EEeHH--
Confidence 3455555554322 223 7999999999 9999999999988886 788899988765 566788984 44321
Q ss_pred chhHHHHHHHhcCCCeeEEEeCCCcch
Q psy14589 166 ELDRFANQILSYGSELDADHPGFTDPV 192 (655)
Q Consensus 166 ~~~d~~~~i~~~~~gvDvV~D~vG~~~ 192 (655)
++.+.+. ..|+|+.++|++.
T Consensus 231 ---~~~~~l~----~aDvVi~at~~~~ 250 (311)
T cd05213 231 ---ELLELLN----EADVVISATGAPH 250 (311)
T ss_pred ---HHHHHHh----cCCEEEECCCCCc
Confidence 3334343 4799999999886
No 189
>PRK05993 short chain dehydrogenase; Provisional
Probab=97.36 E-value=0.0011 Score=69.18 Aligned_cols=81 Identities=23% Similarity=0.259 Sum_probs=58.9
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEE-EeCCccc-hhHHHHHHHhc-CCCeeEEEe
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYV-VDHTIRE-LDRFANQILSY-GSELDADHP 186 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~v-Id~~~~~-~~d~~~~i~~~-~~gvDvV~D 186 (655)
.+++|+|+||+|++|..+++.....|++|+++++++++.+.+.+.|.+.+ .|.++.. .+++.+.+.+. .+.+|+++.
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li~ 82 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEAEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALFN 82 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEEE
Confidence 46789999999999999998888889999999999988887777676544 3555431 11223333222 347999999
Q ss_pred CCCc
Q psy14589 187 GFTD 190 (655)
Q Consensus 187 ~vG~ 190 (655)
+.|.
T Consensus 83 ~Ag~ 86 (277)
T PRK05993 83 NGAY 86 (277)
T ss_pred CCCc
Confidence 8764
No 190
>PRK07109 short chain dehydrogenase; Provisional
Probab=97.34 E-value=0.0025 Score=68.65 Aligned_cols=81 Identities=17% Similarity=0.105 Sum_probs=56.8
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcEE---EeCCccc-hhHHHHHHHhcCCCe
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADYV---VDHTIRE-LDRFANQILSYGSEL 181 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~gv 181 (655)
.+.+|+|+||+||||..+++.....|++|+++++++++.+.+ ++.|+... .|..+.. .....+.+.+..+++
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~i 86 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPI 86 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence 578999999999999999988888899999999988776543 34565432 3554431 112223333333479
Q ss_pred eEEEeCCCc
Q psy14589 182 DADHPGFTD 190 (655)
Q Consensus 182 DvV~D~vG~ 190 (655)
|+++.++|.
T Consensus 87 D~lInnAg~ 95 (334)
T PRK07109 87 DTWVNNAMV 95 (334)
T ss_pred CEEEECCCc
Confidence 999999885
No 191
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=97.32 E-value=0.00084 Score=70.11 Aligned_cols=83 Identities=19% Similarity=0.176 Sum_probs=59.1
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hC----CCc-EE--EeCCccc-hhHHHHHHHhcCC
Q psy14589 109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GL----GAD-YV--VDHTIRE-LDRFANQILSYGS 179 (655)
Q Consensus 109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~L----GAd-~v--Id~~~~~-~~d~~~~i~~~~~ 179 (655)
..+.+++|+|||+|||...+......|.+|+.++|+++|++.+. ++ |.. .+ +|.++.+ ...+.+++.+...
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~ 83 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGG 83 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCC
Confidence 46889999999999999988888888999999999999988763 22 221 23 4555431 1122233333334
Q ss_pred CeeEEEeCCCcc
Q psy14589 180 ELDADHPGFTDP 191 (655)
Q Consensus 180 gvDvV~D~vG~~ 191 (655)
.+|+.++++|-.
T Consensus 84 ~IdvLVNNAG~g 95 (265)
T COG0300 84 PIDVLVNNAGFG 95 (265)
T ss_pred cccEEEECCCcC
Confidence 799999999865
No 192
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=97.31 E-value=0.0059 Score=60.39 Aligned_cols=99 Identities=17% Similarity=0.008 Sum_probs=70.3
Q ss_pred CCCCCCCEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecChHHHHHH----HhCCCcEEEeCCccchhHHHHHHHhcCCC
Q psy14589 106 LYTPEPDTLFIIGANRGNGLAAIQVGKAY-GLTVFASVGCPVGVAKA----YGLGADYVVDHTIRELDRFANQILSYGSE 180 (655)
Q Consensus 106 ~l~~~Gd~VLI~GasGgVG~~avQlAk~~-Ga~Viat~~s~~k~~~a----~~LGAd~vId~~~~~~~d~~~~i~~~~~g 180 (655)
.+ ++|++++=.|| |.|..++++|+.. ..+|++++++++..+.. +++|.+.+.-... +..+.+.+.. .
T Consensus 31 ~~-~~g~~l~DIGa--GtGsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g----~Ap~~L~~~~-~ 102 (187)
T COG2242 31 RP-RPGDRLWDIGA--GTGSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEG----DAPEALPDLP-S 102 (187)
T ss_pred CC-CCCCEEEEeCC--CccHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEec----cchHhhcCCC-C
Confidence 45 79998887787 6677888999554 45999999998877665 5689885533222 2233343333 5
Q ss_pred eeEEEeCCCcchHHHHHHHHHHhccccceEEE
Q psy14589 181 LDADHPGFTDPVYRARRKYFADLAFNYKHFFF 212 (655)
Q Consensus 181 vDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v 212 (655)
+|.+|-.-|+...+.++.++..|++|||+|.-
T Consensus 103 ~daiFIGGg~~i~~ile~~~~~l~~ggrlV~n 134 (187)
T COG2242 103 PDAIFIGGGGNIEEILEAAWERLKPGGRLVAN 134 (187)
T ss_pred CCEEEECCCCCHHHHHHHHHHHcCcCCeEEEE
Confidence 89998665555445689999999999999973
No 193
>PRK07806 short chain dehydrogenase; Provisional
Probab=97.28 E-value=0.004 Score=63.15 Aligned_cols=102 Identities=17% Similarity=0.095 Sum_probs=63.1
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChH-HHHH----HHhCCCcE-E--EeCCccchhHHHH---HHHhcC
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPV-GVAK----AYGLGADY-V--VDHTIRELDRFAN---QILSYG 178 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~-k~~~----a~~LGAd~-v--Id~~~~~~~d~~~---~i~~~~ 178 (655)
.|.+++|+||+|+||..+++.....|++|++++++.+ +.+. ++..|... . .|..+. ++..+ .+.+..
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~ 82 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDE--ESVAALMDTAREEF 82 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCH--HHHHHHHHHHHHhC
Confidence 5789999999999999999888888999998887643 2222 23334321 1 354443 23332 333323
Q ss_pred CCeeEEEeCCCcc-----------------hHHHHHHHHHHhccccceEEEe
Q psy14589 179 SELDADHPGFTDP-----------------VYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 179 ~gvDvV~D~vG~~-----------------~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
+++|+++.+.|.. ....++.+.+.++.+|++|.+.
T Consensus 83 ~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~is 134 (248)
T PRK07806 83 GGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVT 134 (248)
T ss_pred CCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEe
Confidence 4789988887642 1122344555555567777764
No 194
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=97.27 E-value=0.002 Score=62.41 Aligned_cols=93 Identities=16% Similarity=0.124 Sum_probs=63.6
Q ss_pred EEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCCCcc--
Q psy14589 114 LFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGFTDP-- 191 (655)
Q Consensus 114 VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG~~-- 191 (655)
|+|.||+|.+|..+++.+...|.+|++++|++++.+. ..+++.+. ..-.+.+++.+.+ .++|+|+.++|..
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~--~~~~~~~~-~d~~d~~~~~~al----~~~d~vi~~~~~~~~ 73 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED--SPGVEIIQ-GDLFDPDSVKAAL----KGADAVIHAAGPPPK 73 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH--CTTEEEEE-SCTTCHHHHHHHH----TTSSEEEECCHSTTT
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc--ccccccce-eeehhhhhhhhhh----hhcchhhhhhhhhcc
Confidence 7899999999999999999999999999999998776 55555442 2221112233333 2799999999843
Q ss_pred hHHHHHHHHHHhcccc--ceEEEe
Q psy14589 192 VYRARRKYFADLAFNY--KHFFFF 213 (655)
Q Consensus 192 ~~~~l~~~l~~l~~gG--rlv~v~ 213 (655)
........++.++..| ++|.++
T Consensus 74 ~~~~~~~~~~a~~~~~~~~~v~~s 97 (183)
T PF13460_consen 74 DVDAAKNIIEAAKKAGVKRVVYLS 97 (183)
T ss_dssp HHHHHHHHHHHHHHTTSSEEEEEE
T ss_pred cccccccccccccccccccceeee
Confidence 1122455566665555 556554
No 195
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=97.25 E-value=0.0011 Score=73.13 Aligned_cols=117 Identities=12% Similarity=-0.021 Sum_probs=81.0
Q ss_pred HhhhhhHHHHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccc
Q psy14589 87 GLAFRVFHSTQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRE 166 (655)
Q Consensus 87 AAal~~a~~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~ 166 (655)
..++..+..+.+..+.+...+ ++|++||-.|+ |.|.++..+++..|++|++++.+++.++.+++.....-++....
T Consensus 145 ~~~L~~Aq~~k~~~l~~~l~l-~~g~rVLDIGc--G~G~~a~~la~~~g~~V~giDlS~~~l~~A~~~~~~l~v~~~~~- 220 (383)
T PRK11705 145 ADTLEEAQEAKLDLICRKLQL-KPGMRVLDIGC--GWGGLARYAAEHYGVSVVGVTISAEQQKLAQERCAGLPVEIRLQ- 220 (383)
T ss_pred CCCHHHHHHHHHHHHHHHhCC-CCCCEEEEeCC--CccHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccCeEEEEEC-
Confidence 345666666677766666777 89999999998 68889999999999999999999999988876433211221111
Q ss_pred hhHHHHHHHhcCCCeeEEEe-----CCCcch-HHHHHHHHHHhccccceEEEe
Q psy14589 167 LDRFANQILSYGSELDADHP-----GFTDPV-YRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 167 ~~d~~~~i~~~~~gvDvV~D-----~vG~~~-~~~l~~~l~~l~~gGrlv~v~ 213 (655)
++. +..+.+|.|+. .+|... ...++.+.+.|++||++++..
T Consensus 221 --D~~----~l~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~ 267 (383)
T PRK11705 221 --DYR----DLNGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHT 267 (383)
T ss_pred --chh----hcCCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 221 11236888763 345431 133788888999999998864
No 196
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=97.25 E-value=0.0026 Score=73.07 Aligned_cols=85 Identities=16% Similarity=0.083 Sum_probs=58.4
Q ss_pred HhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh---------CCCc-----EE--EeCC
Q psy14589 100 RHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG---------LGAD-----YV--VDHT 163 (655)
Q Consensus 100 aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~---------LGAd-----~v--Id~~ 163 (655)
+.-...+. +.|++|+|+||+|+||..+++.+...|++|++++++.++.+.+.+ .|+. .+ .|..
T Consensus 70 ~~~~~~~~-~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLt 148 (576)
T PLN03209 70 AIPKELDT-KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLE 148 (576)
T ss_pred cccccccc-CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCC
Confidence 33344555 789999999999999999998888889999999999887654422 1321 11 2333
Q ss_pred ccchhHHHHHHHhcCCCeeEEEeCCCcc
Q psy14589 164 IRELDRFANQILSYGSELDADHPGFTDP 191 (655)
Q Consensus 164 ~~~~~d~~~~i~~~~~gvDvV~D~vG~~ 191 (655)
+. ++ +.+.-+++|+||.++|..
T Consensus 149 D~--es----I~~aLggiDiVVn~AG~~ 170 (576)
T PLN03209 149 KP--DQ----IGPALGNASVVICCIGAS 170 (576)
T ss_pred CH--HH----HHHHhcCCCEEEEccccc
Confidence 31 12 223334789999998853
No 197
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=97.25 E-value=0.0013 Score=65.84 Aligned_cols=82 Identities=20% Similarity=0.090 Sum_probs=62.0
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCC---CcEEEeCCccc-hhHHHHHHHhcCCCeeEEE
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLG---ADYVVDHTIRE-LDRFANQILSYGSELDADH 185 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LG---Ad~vId~~~~~-~~d~~~~i~~~~~gvDvV~ 185 (655)
.|.+|||+||++|||+..++--..+|=+||.+.|++++++.+++.- .+.|.|..+.. ..++.+++++....+++++
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvli 83 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVLI 83 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchheee
Confidence 6889999999999999888777778999999999999999987632 24455544431 1246677766655788888
Q ss_pred eCCCcc
Q psy14589 186 PGFTDP 191 (655)
Q Consensus 186 D~vG~~ 191 (655)
++.|-.
T Consensus 84 NNAGIq 89 (245)
T COG3967 84 NNAGIQ 89 (245)
T ss_pred eccccc
Confidence 887743
No 198
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=97.22 E-value=0.00018 Score=82.94 Aligned_cols=77 Identities=18% Similarity=0.200 Sum_probs=59.0
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecC---------------------hHHHHHHHhCCCcEEEeCCccch
Q psy14589 109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGC---------------------PVGVAKAYGLGADYVVDHTIREL 167 (655)
Q Consensus 109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s---------------------~~k~~~a~~LGAd~vId~~~~~~ 167 (655)
+.|++|+|.|+ |++|+++++.++.+|++|++++.. +.+++.++++|++..++.....
T Consensus 135 ~~g~~V~VIGa-GpaGL~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~~- 212 (564)
T PRK12771 135 DTGKRVAVIGG-GPAGLSAAYHLRRMGHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVGE- 212 (564)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEECC-
Confidence 68999999999 999999999999999999888742 3566778899998887754311
Q ss_pred hHH-HHHHHhcCCCeeEEEeCCCcc
Q psy14589 168 DRF-ANQILSYGSELDADHPGFTDP 191 (655)
Q Consensus 168 ~d~-~~~i~~~~~gvDvV~D~vG~~ 191 (655)
+. .+.+. .++|+|++++|..
T Consensus 213 -~~~~~~~~---~~~D~Vi~AtG~~ 233 (564)
T PRK12771 213 -DITLEQLE---GEFDAVFVAIGAQ 233 (564)
T ss_pred -cCCHHHHH---hhCCEEEEeeCCC
Confidence 11 11121 2689999999987
No 199
>PRK06139 short chain dehydrogenase; Provisional
Probab=97.22 E-value=0.0017 Score=69.97 Aligned_cols=81 Identities=21% Similarity=0.237 Sum_probs=58.5
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcEE---EeCCccc-hhHHHHHHHhcCCCe
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADYV---VDHTIRE-LDRFANQILSYGSEL 181 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~gv 181 (655)
.+++|+|+||+||||..+++.....|++|+.+++++++++.+ ++.|++.. .|.++.. .+.+.+.+.+..+++
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 85 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGRI 85 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 678999999999999999998888999999999998877543 44565432 3544431 112333344434579
Q ss_pred eEEEeCCCc
Q psy14589 182 DADHPGFTD 190 (655)
Q Consensus 182 DvV~D~vG~ 190 (655)
|+++.++|.
T Consensus 86 D~lVnnAG~ 94 (330)
T PRK06139 86 DVWVNNVGV 94 (330)
T ss_pred CEEEECCCc
Confidence 999999984
No 200
>PRK06500 short chain dehydrogenase; Provisional
Probab=97.20 E-value=0.0044 Score=62.68 Aligned_cols=81 Identities=22% Similarity=0.148 Sum_probs=56.4
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH-HhCCCcEE---EeCCccc-hhHHHHHHHhcCCCeeEE
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA-YGLGADYV---VDHTIRE-LDRFANQILSYGSELDAD 184 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a-~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~gvDvV 184 (655)
+|.+|+|+||+|++|..+++.....|++|+++++++++.+.+ +++|.... .|..+.. ..++.+.+.+..+++|++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 84 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDAV 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 578999999999999999998888999999999887766544 45665422 2333321 112333344434579999
Q ss_pred EeCCCc
Q psy14589 185 HPGFTD 190 (655)
Q Consensus 185 ~D~vG~ 190 (655)
+.++|.
T Consensus 85 i~~ag~ 90 (249)
T PRK06500 85 FINAGV 90 (249)
T ss_pred EECCCC
Confidence 999875
No 201
>PRK07831 short chain dehydrogenase; Provisional
Probab=97.17 E-value=0.0024 Score=65.63 Aligned_cols=82 Identities=18% Similarity=0.105 Sum_probs=56.3
Q ss_pred CCCCEEEEEcCCC-chHHHHHHHHHHcCCeEEEEecChHHHHHHH----h-CCCcEE----EeCCccc-hhHHHHHHHhc
Q psy14589 109 PEPDTLFIIGANR-GNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----G-LGADYV----VDHTIRE-LDRFANQILSY 177 (655)
Q Consensus 109 ~~Gd~VLI~GasG-gVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~-LGAd~v----Id~~~~~-~~d~~~~i~~~ 177 (655)
.+|++++|+|++| |||..+++.....|++|+++++++++.+.+. + +|...+ .|..+.. .+.+.+.+.+.
T Consensus 15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 94 (262)
T PRK07831 15 LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVER 94 (262)
T ss_pred cCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence 4688999999986 8999999999899999999988877665442 2 454433 2444421 11223333333
Q ss_pred CCCeeEEEeCCCc
Q psy14589 178 GSELDADHPGFTD 190 (655)
Q Consensus 178 ~~gvDvV~D~vG~ 190 (655)
.+++|+++.++|.
T Consensus 95 ~g~id~li~~ag~ 107 (262)
T PRK07831 95 LGRLDVLVNNAGL 107 (262)
T ss_pred cCCCCEEEECCCC
Confidence 3579999999984
No 202
>PRK05872 short chain dehydrogenase; Provisional
Probab=97.16 E-value=0.0021 Score=67.75 Aligned_cols=81 Identities=17% Similarity=0.075 Sum_probs=57.7
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH-HhCCC--cEE---EeCCccc-hhHHHHHHHhcCCCee
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA-YGLGA--DYV---VDHTIRE-LDRFANQILSYGSELD 182 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a-~~LGA--d~v---Id~~~~~-~~d~~~~i~~~~~gvD 182 (655)
+|++|+|+||+||||..+++.....|++|+++++++++++.+ ++++. ... .|.++.. .+++.+.+.+..+++|
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 87 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGID 87 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 688999999999999999998888999999999988876654 44542 211 3544431 1123333433345799
Q ss_pred EEEeCCCc
Q psy14589 183 ADHPGFTD 190 (655)
Q Consensus 183 vV~D~vG~ 190 (655)
+++.++|.
T Consensus 88 ~vI~nAG~ 95 (296)
T PRK05872 88 VVVANAGI 95 (296)
T ss_pred EEEECCCc
Confidence 99999985
No 203
>PRK08265 short chain dehydrogenase; Provisional
Probab=97.16 E-value=0.0046 Score=63.74 Aligned_cols=81 Identities=16% Similarity=0.004 Sum_probs=55.3
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH-HhCCCcE-E--EeCCccc-hhHHHHHHHhcCCCeeEE
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA-YGLGADY-V--VDHTIRE-LDRFANQILSYGSELDAD 184 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a-~~LGAd~-v--Id~~~~~-~~d~~~~i~~~~~gvDvV 184 (655)
.|.+++|+||+|+||..+++.....|++|+++++++++.+.+ +++|... + .|..+.. ..++.+.+.+..+.+|++
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l 84 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDIL 84 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 578999999999999999988888899999999988765554 4455321 1 3444421 012223333333478999
Q ss_pred EeCCCc
Q psy14589 185 HPGFTD 190 (655)
Q Consensus 185 ~D~vG~ 190 (655)
+.+.|.
T Consensus 85 v~~ag~ 90 (261)
T PRK08265 85 VNLACT 90 (261)
T ss_pred EECCCC
Confidence 998874
No 204
>PRK07060 short chain dehydrogenase; Provisional
Probab=97.14 E-value=0.0026 Score=64.24 Aligned_cols=78 Identities=14% Similarity=0.127 Sum_probs=56.6
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hCCCcEE-EeCCccchhHHHHHHHhcCCCeeEEEeC
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GLGADYV-VDHTIRELDRFANQILSYGSELDADHPG 187 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~LGAd~v-Id~~~~~~~d~~~~i~~~~~gvDvV~D~ 187 (655)
.|.+++|+|++|++|..+++.+...|++|+++++++++.+.+. ..+...+ .|..+. +++.+.+.+ .+++|+++.+
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~--~~v~~~~~~-~~~~d~vi~~ 84 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDD--AAIRAALAA-AGAFDGLVNC 84 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCH--HHHHHHHHH-hCCCCEEEEC
Confidence 6789999999999999999999889999999999887776554 3454433 344432 223333332 3478999999
Q ss_pred CCc
Q psy14589 188 FTD 190 (655)
Q Consensus 188 vG~ 190 (655)
+|.
T Consensus 85 ag~ 87 (245)
T PRK07060 85 AGI 87 (245)
T ss_pred CCC
Confidence 985
No 205
>PRK07832 short chain dehydrogenase; Provisional
Probab=97.13 E-value=0.0049 Score=63.84 Aligned_cols=78 Identities=23% Similarity=0.216 Sum_probs=53.8
Q ss_pred EEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcE----EEeCCccc-hhHHHHHHHhcCCCeeE
Q psy14589 113 TLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADY----VVDHTIRE-LDRFANQILSYGSELDA 183 (655)
Q Consensus 113 ~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~----vId~~~~~-~~d~~~~i~~~~~gvDv 183 (655)
+++|+||+|++|..+++.+...|++|+++++++++.+.+ +..|+.. ..|.++.. .+.+.+.+.+..+++|+
T Consensus 2 ~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 81 (272)
T PRK07832 2 RCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMDV 81 (272)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence 699999999999999998888899999998887665443 3345432 24555431 11223334333457999
Q ss_pred EEeCCCc
Q psy14589 184 DHPGFTD 190 (655)
Q Consensus 184 V~D~vG~ 190 (655)
++.+.|.
T Consensus 82 lv~~ag~ 88 (272)
T PRK07832 82 VMNIAGI 88 (272)
T ss_pred EEECCCC
Confidence 9999985
No 206
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.12 E-value=0.0052 Score=63.12 Aligned_cols=81 Identities=16% Similarity=0.076 Sum_probs=53.0
Q ss_pred CCCEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEE----EeCCccc-hhHHHHHHHhcCCCee
Q psy14589 110 EPDTLFIIGAN--RGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYV----VDHTIRE-LDRFANQILSYGSELD 182 (655)
Q Consensus 110 ~Gd~VLI~Gas--GgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~v----Id~~~~~-~~d~~~~i~~~~~gvD 182 (655)
.|++++|+||+ +|||..+++.....|++|+.++++++..+.++++....+ .|..+.. .+++.+.+.+..+.+|
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD 85 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVGKID 85 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCCC
Confidence 68899999998 799999888777789999999887443333444422111 3444321 1223344444335799
Q ss_pred EEEeCCCc
Q psy14589 183 ADHPGFTD 190 (655)
Q Consensus 183 vV~D~vG~ 190 (655)
+++.++|.
T Consensus 86 ~lv~nAg~ 93 (252)
T PRK06079 86 GIVHAIAY 93 (252)
T ss_pred EEEEcccc
Confidence 99998873
No 207
>PRK07576 short chain dehydrogenase; Provisional
Probab=97.10 E-value=0.0058 Score=63.14 Aligned_cols=79 Identities=15% Similarity=0.087 Sum_probs=54.1
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcE---EEeCCccchhHHHHHHHh---cCC
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADY---VVDHTIRELDRFANQILS---YGS 179 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~---vId~~~~~~~d~~~~i~~---~~~ 179 (655)
++.+++|+||+|+||..+++.....|++|+++++++++.+.. .+.+... .+|.++. +++.+.+.+ ..+
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~--~~i~~~~~~~~~~~~ 85 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDY--AAVEAAFAQIADEFG 85 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCH--HHHHHHHHHHHHHcC
Confidence 688999999999999999998888999999999887765433 2233322 1354432 233333332 234
Q ss_pred CeeEEEeCCCc
Q psy14589 180 ELDADHPGFTD 190 (655)
Q Consensus 180 gvDvV~D~vG~ 190 (655)
++|+++.+.|.
T Consensus 86 ~iD~vi~~ag~ 96 (264)
T PRK07576 86 PIDVLVSGAAG 96 (264)
T ss_pred CCCEEEECCCC
Confidence 78999988763
No 208
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=97.10 E-value=0.0075 Score=61.69 Aligned_cols=81 Identities=14% Similarity=0.055 Sum_probs=53.8
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH---HhCCCcE---EEeCCccc-hhHHHHHHHhcCCCee
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA---YGLGADY---VVDHTIRE-LDRFANQILSYGSELD 182 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a---~~LGAd~---vId~~~~~-~~d~~~~i~~~~~gvD 182 (655)
.|.+++|+||+|+||..+++.....|++|+++++++...+.. ...|.+. ..|..+.. ..++.+.+.+..+++|
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 86 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRID 86 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCCe
Confidence 578999999999999999988888899999998875433222 2335432 23554421 1123333333345799
Q ss_pred EEEeCCCc
Q psy14589 183 ADHPGFTD 190 (655)
Q Consensus 183 vV~D~vG~ 190 (655)
+++.++|.
T Consensus 87 ~lv~nAg~ 94 (260)
T PRK12823 87 VLINNVGG 94 (260)
T ss_pred EEEECCcc
Confidence 99999873
No 209
>cd04886 ACT_ThrD-II-like C-terminal ACT domain of biodegradative (catabolic) threonine dehydratase II (ThrD-II) and other related ACT domains. This CD includes the C-terminal ACT domain of biodegradative (catabolic) threonine dehydratase II (ThrD-II) and other related ACT domains. The Escherichia coli tdcB gene product, ThrD-II, anaerobically catalyzes the pyridoxal phosphate-dependent dehydration of L-threonine and L-serine to ammonia and to alpha-ketobutyrate and pyruvate, respectively. Tetrameric ThrD-II is subject to allosteric activation by AMP, inhibition by alpha-keto acids, and catabolite inactivation by several metabolites of glycolysis and the citric acid cycle. Also included in this CD are N-terminal ACT domains present in smaller (~170 a.a.) archaeal proteins of unknown function. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=97.09 E-value=0.0018 Score=52.48 Aligned_cols=65 Identities=15% Similarity=0.210 Sum_probs=53.0
Q ss_pred EEEccCCCcchHHHHHHHHHhCCcceeeeecccCCC--CCcceEEEEEecC--CchHHHHHHHHHccCCc
Q psy14589 265 IFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTR--IENNYEFMVECAP--GGDLSSVIESLRSSCSY 330 (655)
Q Consensus 265 ~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~--~~~~Y~FfVd~eg--~~~v~~~l~~L~~~~~~ 330 (655)
.+.+++ +||.|+++++.+++.++|+..+.+++.+. ..+.+.+.+.++. .+.++++++.|++.+-.
T Consensus 2 ~v~~~d-~~G~L~~i~~~i~~~~~nI~~i~~~~~~~~~~~~~~~~~i~v~~~~~~~l~~l~~~l~~~g~~ 70 (73)
T cd04886 2 RVELPD-RPGQLAKLLAVIAEAGANIIEVSHDRAFKTLPLGEVEVELTLETRGAEHIEEIIAALREAGYD 70 (73)
T ss_pred EEEeCC-CCChHHHHHHHHHHcCCCEEEEEEEeccCCCCCceEEEEEEEEeCCHHHHHHHHHHHHHcCCE
Confidence 345676 89999999999999999999999888653 3567788888877 47788999999887543
No 210
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.08 E-value=0.0054 Score=68.59 Aligned_cols=81 Identities=22% Similarity=0.167 Sum_probs=54.7
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh--HHHHH-HHhCCCcEE-EeCCccc-hhHHHHHHHhcCCCeeEE
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCP--VGVAK-AYGLGADYV-VDHTIRE-LDRFANQILSYGSELDAD 184 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~--~k~~~-a~~LGAd~v-Id~~~~~-~~d~~~~i~~~~~gvDvV 184 (655)
+|++++|+|++|+||..+++.....|++|+++++++ ++.+. ..++++..+ +|..+.. ...+.+.+.+..+++|++
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~v 288 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDIV 288 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence 578999999999999999998888999999987743 23322 345665433 4655431 112233333333479999
Q ss_pred EeCCCc
Q psy14589 185 HPGFTD 190 (655)
Q Consensus 185 ~D~vG~ 190 (655)
+.++|.
T Consensus 289 i~~AG~ 294 (450)
T PRK08261 289 VHNAGI 294 (450)
T ss_pred EECCCc
Confidence 999984
No 211
>PRK12829 short chain dehydrogenase; Provisional
Probab=97.07 E-value=0.0044 Score=63.26 Aligned_cols=82 Identities=16% Similarity=0.081 Sum_probs=55.3
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh-CCCc----EEEeCCccc-hhHHHHHHHhcCCCeeE
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG-LGAD----YVVDHTIRE-LDRFANQILSYGSELDA 183 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~-LGAd----~vId~~~~~-~~d~~~~i~~~~~gvDv 183 (655)
++.+++|+||+|++|..+++.....|++|+++++++++.+.+.+ .+-. ...|..+.. ..++.+.+.+..+++|+
T Consensus 10 ~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 89 (264)
T PRK12829 10 DGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGLDV 89 (264)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 77899999999999999998888899999999998776655433 2211 123444321 01122333333347999
Q ss_pred EEeCCCcc
Q psy14589 184 DHPGFTDP 191 (655)
Q Consensus 184 V~D~vG~~ 191 (655)
|+.++|..
T Consensus 90 vi~~ag~~ 97 (264)
T PRK12829 90 LVNNAGIA 97 (264)
T ss_pred EEECCCCC
Confidence 99988754
No 212
>PRK08339 short chain dehydrogenase; Provisional
Probab=97.04 E-value=0.0085 Score=62.03 Aligned_cols=80 Identities=23% Similarity=0.196 Sum_probs=54.5
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh-C----CCc-E--EEeCCccc-hhHHHHHHHhcCCC
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG-L----GAD-Y--VVDHTIRE-LDRFANQILSYGSE 180 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~-L----GAd-~--vId~~~~~-~~d~~~~i~~~~~g 180 (655)
.|++++|+|++||||..+++.....|++|+++++++++.+.+.+ + |.. . ..|..+.. .+.+.+.+.+ .++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~-~g~ 85 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKN-IGE 85 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHh-hCC
Confidence 68899999999999999998888899999999998877655432 1 322 1 13444421 1123333332 247
Q ss_pred eeEEEeCCCc
Q psy14589 181 LDADHPGFTD 190 (655)
Q Consensus 181 vDvV~D~vG~ 190 (655)
+|+++.++|.
T Consensus 86 iD~lv~nag~ 95 (263)
T PRK08339 86 PDIFFFSTGG 95 (263)
T ss_pred CcEEEECCCC
Confidence 9999998875
No 213
>PRK06057 short chain dehydrogenase; Provisional
Probab=97.03 E-value=0.0041 Score=63.65 Aligned_cols=81 Identities=21% Similarity=0.144 Sum_probs=56.4
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH-HhCCCcEE-EeCCccc-hhHHHHHHHhcCCCeeEEEe
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA-YGLGADYV-VDHTIRE-LDRFANQILSYGSELDADHP 186 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a-~~LGAd~v-Id~~~~~-~~d~~~~i~~~~~gvDvV~D 186 (655)
.|++|+|+||+|+||..+++.....|++|+++++++.+.+.+ .+++...+ .|..+.. .+...+.+.+..+++|+++.
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 85 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAFN 85 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 688999999999999999998888899999999988766554 44554322 3554431 11222333333347899999
Q ss_pred CCCc
Q psy14589 187 GFTD 190 (655)
Q Consensus 187 ~vG~ 190 (655)
+.|.
T Consensus 86 ~ag~ 89 (255)
T PRK06057 86 NAGI 89 (255)
T ss_pred CCCc
Confidence 8874
No 214
>PRK08017 oxidoreductase; Provisional
Probab=97.03 E-value=0.004 Score=63.37 Aligned_cols=79 Identities=25% Similarity=0.300 Sum_probs=57.3
Q ss_pred CEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEE-EeCCccc-hhHHHHHHHhc-CCCeeEEEeCC
Q psy14589 112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYV-VDHTIRE-LDRFANQILSY-GSELDADHPGF 188 (655)
Q Consensus 112 d~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~v-Id~~~~~-~~d~~~~i~~~-~~gvDvV~D~v 188 (655)
++|+|+||+|+||..+++.....|++|+++++++++.+.+++.|++.+ .|..+.. ..+..+.+.+. .+++|.++.+.
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~a 82 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNSLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNNA 82 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEECC
Confidence 579999999999999999888889999999999988888887887554 3444321 01223333332 24688888887
Q ss_pred Cc
Q psy14589 189 TD 190 (655)
Q Consensus 189 G~ 190 (655)
|.
T Consensus 83 g~ 84 (256)
T PRK08017 83 GF 84 (256)
T ss_pred CC
Confidence 64
No 215
>PRK12939 short chain dehydrogenase; Provisional
Probab=97.03 E-value=0.0082 Score=60.69 Aligned_cols=81 Identities=20% Similarity=0.122 Sum_probs=54.7
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcE-E--EeCCccc-hhHHHHHHHhcCCCe
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADY-V--VDHTIRE-LDRFANQILSYGSEL 181 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~-v--Id~~~~~-~~d~~~~i~~~~~gv 181 (655)
++.+++|+|++|+||..++......|++|+++++++++.+.+ ++.|... + .|..+.. ...+.+.+.+..+++
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 85 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGL 85 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 578999999999999999988888899999998887765543 2334322 1 2444321 011223333333479
Q ss_pred eEEEeCCCc
Q psy14589 182 DADHPGFTD 190 (655)
Q Consensus 182 DvV~D~vG~ 190 (655)
|+++.++|.
T Consensus 86 d~vi~~ag~ 94 (250)
T PRK12939 86 DGLVNNAGI 94 (250)
T ss_pred CEEEECCCC
Confidence 999999985
No 216
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.01 E-value=0.0043 Score=62.77 Aligned_cols=81 Identities=17% Similarity=0.073 Sum_probs=54.9
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcE---EEeCCccc-hhHHHHHHHhcCCCe
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADY---VVDHTIRE-LDRFANQILSYGSEL 181 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~---vId~~~~~-~~d~~~~i~~~~~gv 181 (655)
+|++++|+|++|++|..+++.+...|++|+.+++++++.+.+ ++.|+.. .+|..+.. .+++.+.+.+..+++
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQL 83 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 688999999999999999998888999999999987765443 3345432 23433321 112222333223478
Q ss_pred eEEEeCCCc
Q psy14589 182 DADHPGFTD 190 (655)
Q Consensus 182 DvV~D~vG~ 190 (655)
|+++.++|.
T Consensus 84 d~vi~~ag~ 92 (253)
T PRK08217 84 NGLINNAGI 92 (253)
T ss_pred CEEEECCCc
Confidence 999999874
No 217
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=96.99 E-value=0.0018 Score=57.61 Aligned_cols=96 Identities=15% Similarity=0.024 Sum_probs=64.4
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHH-cCCeEEEEecChHHHHHHHh----CCC-cEEEeCCccchhHHHHHHHhcCCCeeE
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKA-YGLTVFASVGCPVGVAKAYG----LGA-DYVVDHTIRELDRFANQILSYGSELDA 183 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~-~Ga~Viat~~s~~k~~~a~~----LGA-d~vId~~~~~~~d~~~~i~~~~~gvDv 183 (655)
+|.+||-.|+ |.|.+++.+++. .|++|++++.+++-.+.+++ .+. +.+ ..... ++ ........++|+
T Consensus 1 p~~~vLDlGc--G~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i-~~~~~---d~-~~~~~~~~~~D~ 73 (112)
T PF12847_consen 1 PGGRVLDLGC--GTGRLSIALARLFPGARVVGVDISPEMLEIARERAAEEGLSDRI-TFVQG---DA-EFDPDFLEPFDL 73 (112)
T ss_dssp TTCEEEEETT--TTSHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTTTTE-EEEES---CC-HGGTTTSSCEEE
T ss_pred CCCEEEEEcC--cCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCe-EEEEC---cc-ccCcccCCCCCE
Confidence 5889999997 668899999994 68899999999988777753 222 222 11111 23 222222347999
Q ss_pred EEeCC-Ccc-hH------HHHHHHHHHhccccceEEE
Q psy14589 184 DHPGF-TDP-VY------RARRKYFADLAFNYKHFFF 212 (655)
Q Consensus 184 V~D~v-G~~-~~------~~l~~~l~~l~~gGrlv~v 212 (655)
|+... ... .. +.++.+.+.|++||++++-
T Consensus 74 v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi~ 110 (112)
T PF12847_consen 74 VICSGFTLHFLLPLDERRRVLERIRRLLKPGGRLVIN 110 (112)
T ss_dssp EEECSGSGGGCCHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEECCCccccccchhHHHHHHHHHHHhcCCCcEEEEE
Confidence 99766 222 11 2367888899999999863
No 218
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=96.99 E-value=0.0039 Score=64.06 Aligned_cols=81 Identities=21% Similarity=0.088 Sum_probs=55.6
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh-CCCc-EE--EeCCccc-hhHHHHHHHhcCCCeeEE
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG-LGAD-YV--VDHTIRE-LDRFANQILSYGSELDAD 184 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~-LGAd-~v--Id~~~~~-~~d~~~~i~~~~~gvDvV 184 (655)
+|++++|+||+||||..+++.....|++|+++++++++.+.+.+ ++.. .+ .|..+.. .+.+.+.+.+..+++|++
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 84 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCF 84 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 67899999999999999998888889999999998887766543 4421 11 2433321 112233333333479999
Q ss_pred EeCCCc
Q psy14589 185 HPGFTD 190 (655)
Q Consensus 185 ~D~vG~ 190 (655)
+.++|.
T Consensus 85 i~~ag~ 90 (263)
T PRK06200 85 VGNAGI 90 (263)
T ss_pred EECCCC
Confidence 998874
No 219
>PRK06949 short chain dehydrogenase; Provisional
Probab=96.99 E-value=0.0029 Score=64.53 Aligned_cols=79 Identities=18% Similarity=0.072 Sum_probs=55.4
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh----CCC-cEE--EeCCccchhHHHHH---HHhcCC
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG----LGA-DYV--VDHTIRELDRFANQ---ILSYGS 179 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~----LGA-d~v--Id~~~~~~~d~~~~---i~~~~~ 179 (655)
+|++|+|+||+|+||..+++.+...|++|+++++++++.+.+.+ .+. ..+ .|..+. +++.+. +.+..+
T Consensus 8 ~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~ 85 (258)
T PRK06949 8 EGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDY--QSIKAAVAHAETEAG 85 (258)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCH--HHHHHHHHHHHHhcC
Confidence 68999999999999999998888889999999998887655432 222 222 243332 233333 333334
Q ss_pred CeeEEEeCCCc
Q psy14589 180 ELDADHPGFTD 190 (655)
Q Consensus 180 gvDvV~D~vG~ 190 (655)
++|+++.++|.
T Consensus 86 ~~d~li~~ag~ 96 (258)
T PRK06949 86 TIDILVNNSGV 96 (258)
T ss_pred CCCEEEECCCC
Confidence 78999999984
No 220
>PRK08267 short chain dehydrogenase; Provisional
Probab=96.98 E-value=0.0084 Score=61.43 Aligned_cols=77 Identities=27% Similarity=0.271 Sum_probs=53.7
Q ss_pred CEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh-CC-Cc-E--EEeCCccchhHHHHHHHh---c-CCCee
Q psy14589 112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG-LG-AD-Y--VVDHTIRELDRFANQILS---Y-GSELD 182 (655)
Q Consensus 112 d~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~-LG-Ad-~--vId~~~~~~~d~~~~i~~---~-~~gvD 182 (655)
++++|+||+|+||..+++.....|++|+++++++++.+.+.+ ++ .. . .+|..+. +++.+.+.+ . .+++|
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~--~~v~~~~~~~~~~~~~~id 79 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDR--AAWDAALADFAAATGGRLD 79 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCH--HHHHHHHHHHHHHcCCCCC
Confidence 479999999999999998777889999999998887766543 33 11 1 2354442 233333332 2 44799
Q ss_pred EEEeCCCc
Q psy14589 183 ADHPGFTD 190 (655)
Q Consensus 183 vV~D~vG~ 190 (655)
+++.++|.
T Consensus 80 ~vi~~ag~ 87 (260)
T PRK08267 80 VLFNNAGI 87 (260)
T ss_pred EEEECCCC
Confidence 99999885
No 221
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=96.98 E-value=0.0014 Score=73.25 Aligned_cols=71 Identities=14% Similarity=0.150 Sum_probs=56.0
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHH-HHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeC
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVA-KAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPG 187 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~-~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~ 187 (655)
+|++|+|.|+ |++|.++++.++..|+ +|+++.+++++.+ .+..+|++ +++.. +..+.+. ++|+|++|
T Consensus 181 ~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~-~~~~~-----~~~~~l~----~aDvVI~a 249 (423)
T PRK00045 181 SGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGE-AIPLD-----ELPEALA----EADIVISS 249 (423)
T ss_pred cCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-EeeHH-----HHHHHhc----cCCEEEEC
Confidence 7899999999 9999999999999998 7989999988755 56778864 44331 3333332 68999999
Q ss_pred CCcc
Q psy14589 188 FTDP 191 (655)
Q Consensus 188 vG~~ 191 (655)
+|++
T Consensus 250 T~s~ 253 (423)
T PRK00045 250 TGAP 253 (423)
T ss_pred CCCC
Confidence 9987
No 222
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=96.97 E-value=0.00028 Score=64.45 Aligned_cols=49 Identities=18% Similarity=-0.027 Sum_probs=34.1
Q ss_pred CCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCCC--cchHHHHHHHHHHhccccceEEEe
Q psy14589 154 LGADYVVDHTIRELDRFANQILSYGSELDADHPGFT--DPVYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 154 LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG--~~~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
||||+||||+++ ++ ...+++|+|+|++| ++. .+..++++| ++|++|.++
T Consensus 1 LGAd~vidy~~~---~~-----~~~~~~D~ViD~~g~~~~~--~~~~~~~~l-~~G~~v~i~ 51 (127)
T PF13602_consen 1 LGADEVIDYRDT---DF-----AGPGGVDVVIDTVGQTGES--LLDASRKLL-PGGRVVSIG 51 (127)
T ss_dssp CT-SEEEETTCS---HH-----HTTS-EEEEEESS-CCHHH--CGGGCCCTE-EEEEEEEE-
T ss_pred CCcCEEecCCCc---cc-----cCCCCceEEEECCCCccHH--HHHHHHHHC-CCCEEEEEC
Confidence 799999999964 45 22448999999999 442 136666777 999999886
No 223
>PRK06841 short chain dehydrogenase; Provisional
Probab=96.97 E-value=0.0042 Score=63.31 Aligned_cols=81 Identities=15% Similarity=-0.003 Sum_probs=54.4
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcE--E--EeCCccc-hhHHHHHHHhcCCCeeEE
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADY--V--VDHTIRE-LDRFANQILSYGSELDAD 184 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~--v--Id~~~~~-~~d~~~~i~~~~~gvDvV 184 (655)
.|.+|+|+||+|+||..+++.....|++|+.+++++++.+.+.++.... + .|..+.. ...+.+.+.+..+++|++
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~v 93 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDIL 93 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 6789999999999999998888788999999998876655444432222 2 3443321 012222333333478999
Q ss_pred EeCCCc
Q psy14589 185 HPGFTD 190 (655)
Q Consensus 185 ~D~vG~ 190 (655)
+.++|.
T Consensus 94 i~~ag~ 99 (255)
T PRK06841 94 VNSAGV 99 (255)
T ss_pred EECCCC
Confidence 999985
No 224
>PRK06128 oxidoreductase; Provisional
Probab=96.96 E-value=0.009 Score=63.05 Aligned_cols=81 Identities=16% Similarity=0.005 Sum_probs=51.8
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHH------HHHHHhCCCcEE---EeCCccc-hhHHHHHHHhcCC
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVG------VAKAYGLGADYV---VDHTIRE-LDRFANQILSYGS 179 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k------~~~a~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~ 179 (655)
.|.+|||+||+|+||..+++.....|++|+.+.++++. .+.+++.|.... .|..+.. ..++.+.+.+..+
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 133 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELG 133 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhC
Confidence 68899999999999999998877789999887654321 122334454322 2444321 1123333333334
Q ss_pred CeeEEEeCCCc
Q psy14589 180 ELDADHPGFTD 190 (655)
Q Consensus 180 gvDvV~D~vG~ 190 (655)
++|+++.++|.
T Consensus 134 ~iD~lV~nAg~ 144 (300)
T PRK06128 134 GLDILVNIAGK 144 (300)
T ss_pred CCCEEEECCcc
Confidence 79999998874
No 225
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=96.95 E-value=0.0041 Score=63.99 Aligned_cols=81 Identities=15% Similarity=0.090 Sum_probs=54.6
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhC-CCc-EE--EeCCccc-hhHHHHHHHhcCCCeeEE
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGL-GAD-YV--VDHTIRE-LDRFANQILSYGSELDAD 184 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~L-GAd-~v--Id~~~~~-~~d~~~~i~~~~~gvDvV 184 (655)
+|++++|+||+||||..+++.....|++|+++++++++.+.+.+. |.. .. .|..+.. .++..+.+.+..+++|++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 83 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCL 83 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence 578999999999999999988888899999999988777666543 321 11 2443321 112222333333478999
Q ss_pred EeCCCc
Q psy14589 185 HPGFTD 190 (655)
Q Consensus 185 ~D~vG~ 190 (655)
+.+.|.
T Consensus 84 i~~Ag~ 89 (262)
T TIGR03325 84 IPNAGI 89 (262)
T ss_pred EECCCC
Confidence 988873
No 226
>PF01842 ACT: ACT domain; InterPro: IPR002912 The ACT domain is found in a variety of contexts and is proposed to be a conserved regulatory binding fold. ACT domains are linked to a wide range of metabolic enzymes that are regulated by amino acid concentration. The archetypical ACT domain is the C-terminal regulatory domain of 3-phosphoglycerate dehydrogenase (3PGDH), which folds with a ferredoxin-like topology. A pair of ACT domains form an eight-stranded antiparallel sheet with two molecules of allosteric inhibitor serine bound in the interface. Biochemical exploration of a few other proteins containing ACT domains supports the suggestions that these domains contain the archetypical ACT structure [].; GO: 0016597 amino acid binding, 0008152 metabolic process; PDB: 3L76_B 2F06_B 3NRB_C 1Y7P_C 2QMX_A 2DT9_A 2ZHO_D 3K5P_A 3TVI_K 3C1M_C ....
Probab=96.95 E-value=0.0029 Score=50.76 Aligned_cols=62 Identities=19% Similarity=0.186 Sum_probs=48.4
Q ss_pred EEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecC-CchHHHHHHHHHcc
Q psy14589 263 FVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAP-GGDLSSVIESLRSS 327 (655)
Q Consensus 263 sl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg-~~~v~~~l~~L~~~ 327 (655)
.+.+.+++ +||.|+++++.|+++++|+..+.+++.+.. ...+++.... .....+++++|++.
T Consensus 2 ~v~v~~~d-rpG~l~~v~~~la~~~inI~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~ 64 (66)
T PF01842_consen 2 RVRVIVPD-RPGILADVTEILADHGINIDSISQSSDKDG--VGIVFIVIVVDEEDLEKLLEELEAL 64 (66)
T ss_dssp EEEEEEET-STTHHHHHHHHHHHTTEEEEEEEEEEESST--TEEEEEEEEEEGHGHHHHHHHHHHH
T ss_pred EEEEEcCC-CCCHHHHHHHHHHHcCCCHHHeEEEecCCC--ceEEEEEEECCCCCHHHHHHHHHcc
Confidence 45667787 999999999999999999999999998877 3334444433 66777778877754
No 227
>PRK12828 short chain dehydrogenase; Provisional
Probab=96.94 E-value=0.0052 Score=61.51 Aligned_cols=81 Identities=16% Similarity=-0.014 Sum_probs=53.4
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHH----HHhCCCcEE-EeCCccc-hhHHHHHHHhcCCCeeE
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAK----AYGLGADYV-VDHTIRE-LDRFANQILSYGSELDA 183 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~----a~~LGAd~v-Id~~~~~-~~d~~~~i~~~~~gvDv 183 (655)
+|.+++|+|++|+||..+++.....|++|+++++++++... +.+.++..+ .|..+.. .....+.+.+..+++|+
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 85 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLDA 85 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcCE
Confidence 58899999999999999998888889999999997765332 223344332 2333321 01122333333347999
Q ss_pred EEeCCCc
Q psy14589 184 DHPGFTD 190 (655)
Q Consensus 184 V~D~vG~ 190 (655)
|+.+.|.
T Consensus 86 vi~~ag~ 92 (239)
T PRK12828 86 LVNIAGA 92 (239)
T ss_pred EEECCcc
Confidence 9998874
No 228
>PRK07814 short chain dehydrogenase; Provisional
Probab=96.93 E-value=0.004 Score=64.21 Aligned_cols=79 Identities=19% Similarity=0.149 Sum_probs=54.8
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hCCCc-EE--EeCCccchhHHH---HHHHhcCC
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GLGAD-YV--VDHTIRELDRFA---NQILSYGS 179 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~LGAd-~v--Id~~~~~~~d~~---~~i~~~~~ 179 (655)
+|.+++|+|++|+||...++.....|++|+++++++++.+.+. ..|.. .+ +|.++. +++. +.+.+..+
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~ 86 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHP--EATAGLAGQAVEAFG 86 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCH--HHHHHHHHHHHHHcC
Confidence 6889999999999999999988889999999999887665442 22322 22 455443 1222 22322234
Q ss_pred CeeEEEeCCCc
Q psy14589 180 ELDADHPGFTD 190 (655)
Q Consensus 180 gvDvV~D~vG~ 190 (655)
++|+++.++|.
T Consensus 87 ~id~vi~~Ag~ 97 (263)
T PRK07814 87 RLDIVVNNVGG 97 (263)
T ss_pred CCCEEEECCCC
Confidence 79999998874
No 229
>PRK09242 tropinone reductase; Provisional
Probab=96.92 E-value=0.0067 Score=62.03 Aligned_cols=81 Identities=19% Similarity=0.098 Sum_probs=55.2
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hC--CCcE---EEeCCccc-hhHHHHHHHhcCC
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GL--GADY---VVDHTIRE-LDRFANQILSYGS 179 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~L--GAd~---vId~~~~~-~~d~~~~i~~~~~ 179 (655)
.|.+++|+|++|+||..+++.....|++|+++++++++.+.+. .. +... ..|..+.. ..++.+.+.+..+
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 87 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWD 87 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 6889999999999999999888888999999999887665442 12 2221 12444321 1123333433345
Q ss_pred CeeEEEeCCCc
Q psy14589 180 ELDADHPGFTD 190 (655)
Q Consensus 180 gvDvV~D~vG~ 190 (655)
++|+++.+.|.
T Consensus 88 ~id~li~~ag~ 98 (257)
T PRK09242 88 GLHILVNNAGG 98 (257)
T ss_pred CCCEEEECCCC
Confidence 79999999985
No 230
>PRK06180 short chain dehydrogenase; Provisional
Probab=96.90 E-value=0.005 Score=64.00 Aligned_cols=79 Identities=23% Similarity=0.121 Sum_probs=55.3
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcE--E--EeCCccchhHHHH---HHHhcCCCee
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADY--V--VDHTIRELDRFAN---QILSYGSELD 182 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~--v--Id~~~~~~~d~~~---~i~~~~~gvD 182 (655)
.+++|+|+||+|+||..+++.....|++|+++++++++.+.+.+..... . .|..+. +.+.+ .+.+..+++|
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~--~~~~~~~~~~~~~~~~~d 80 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDF--DAIDAVVADAEATFGPID 80 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCH--HHHHHHHHHHHHHhCCCC
Confidence 4678999999999999999888888999999999988776665532221 1 344442 12222 2222234689
Q ss_pred EEEeCCCc
Q psy14589 183 ADHPGFTD 190 (655)
Q Consensus 183 vV~D~vG~ 190 (655)
+++.+.|.
T Consensus 81 ~vv~~ag~ 88 (277)
T PRK06180 81 VLVNNAGY 88 (277)
T ss_pred EEEECCCc
Confidence 99999886
No 231
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=96.87 E-value=0.0081 Score=63.73 Aligned_cols=90 Identities=13% Similarity=0.184 Sum_probs=66.7
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCCC
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGFT 189 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG 189 (655)
.|++|+|.|. |++|.++++.++.+|++|++.++++++.+.+.+.|+.. ++. +++.+.+. +.|+|+.+++
T Consensus 150 ~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~~g~~~-~~~-----~~l~~~l~----~aDiVint~P 218 (287)
T TIGR02853 150 HGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARITEMGLIP-FPL-----NKLEEKVA----EIDIVINTIP 218 (287)
T ss_pred CCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCee-ecH-----HHHHHHhc----cCCEEEECCC
Confidence 7899999999 99999999999999999999999988887777777653 221 13333332 6899999997
Q ss_pred cchHHHHHHHHHHhccccceEEE
Q psy14589 190 DPVYRARRKYFADLAFNYKHFFF 212 (655)
Q Consensus 190 ~~~~~~l~~~l~~l~~gGrlv~v 212 (655)
... .-...++.++++..++=+
T Consensus 219 ~~i--i~~~~l~~~k~~aliIDl 239 (287)
T TIGR02853 219 ALV--LTADVLSKLPKHAVIIDL 239 (287)
T ss_pred hHH--hCHHHHhcCCCCeEEEEe
Confidence 653 024567778876544444
No 232
>PRK07825 short chain dehydrogenase; Provisional
Probab=96.86 E-value=0.0049 Score=63.74 Aligned_cols=81 Identities=20% Similarity=0.088 Sum_probs=56.3
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH-HhCCCcEE--EeCCccc-hhHHHHHHHhcCCCeeEEE
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA-YGLGADYV--VDHTIRE-LDRFANQILSYGSELDADH 185 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a-~~LGAd~v--Id~~~~~-~~d~~~~i~~~~~gvDvV~ 185 (655)
.|.+++|+||+||||..+++.....|++|+++++++++.+.+ ..++...+ .|..+.. .+.+.+.+.+..+++|+++
T Consensus 4 ~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li 83 (273)
T PRK07825 4 RGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLV 83 (273)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 578999999999999999987777899999999988877654 34552222 3544431 1122333443335799999
Q ss_pred eCCCc
Q psy14589 186 PGFTD 190 (655)
Q Consensus 186 D~vG~ 190 (655)
.++|.
T Consensus 84 ~~ag~ 88 (273)
T PRK07825 84 NNAGV 88 (273)
T ss_pred ECCCc
Confidence 99884
No 233
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.86 E-value=0.014 Score=60.95 Aligned_cols=81 Identities=16% Similarity=0.136 Sum_probs=54.2
Q ss_pred CCCEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecChH---HHHHH-HhCCCcEE--EeCCccc-hhHHHHHHHhcCCC
Q psy14589 110 EPDTLFIIGAN--RGNGLAAIQVGKAYGLTVFASVGCPV---GVAKA-YGLGADYV--VDHTIRE-LDRFANQILSYGSE 180 (655)
Q Consensus 110 ~Gd~VLI~Gas--GgVG~~avQlAk~~Ga~Viat~~s~~---k~~~a-~~LGAd~v--Id~~~~~-~~d~~~~i~~~~~g 180 (655)
.|++++|+||+ +|||.++++.....|++|+.++++++ +.+.+ .++|...+ .|.++.. .+.+.+.+.+..++
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g~ 83 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLGK 83 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 57899999997 79999998877778999999888742 33333 34554322 4554431 12334444443457
Q ss_pred eeEEEeCCCc
Q psy14589 181 LDADHPGFTD 190 (655)
Q Consensus 181 vDvV~D~vG~ 190 (655)
+|+++.++|.
T Consensus 84 iDilVnnAG~ 93 (274)
T PRK08415 84 IDFIVHSVAF 93 (274)
T ss_pred CCEEEECCcc
Confidence 9999999884
No 234
>PRK06101 short chain dehydrogenase; Provisional
Probab=96.85 E-value=0.017 Score=58.64 Aligned_cols=76 Identities=14% Similarity=-0.035 Sum_probs=50.6
Q ss_pred CEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCC-cE--EEeCCccchhHHHHHHHhcCCCeeEEEeCC
Q psy14589 112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGA-DY--VVDHTIRELDRFANQILSYGSELDADHPGF 188 (655)
Q Consensus 112 d~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGA-d~--vId~~~~~~~d~~~~i~~~~~gvDvV~D~v 188 (655)
.+++|+||+||+|..++......|++|+++++++++.+.+.+.+. .. ..|.++. +++.+.+.+.....|+++.+.
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~d~~i~~a 79 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDH--PGTKAALSQLPFIPELWIFNA 79 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCH--HHHHHHHHhcccCCCEEEEcC
Confidence 469999999999998877777789999999999888776654331 11 2344442 344444544333456665555
Q ss_pred C
Q psy14589 189 T 189 (655)
Q Consensus 189 G 189 (655)
|
T Consensus 80 g 80 (240)
T PRK06101 80 G 80 (240)
T ss_pred c
Confidence 4
No 235
>PRK07326 short chain dehydrogenase; Provisional
Probab=96.85 E-value=0.01 Score=59.61 Aligned_cols=79 Identities=16% Similarity=0.065 Sum_probs=53.5
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH-HhCCC---cEEE--eCCccchhHHHHHHH---hcCCC
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA-YGLGA---DYVV--DHTIRELDRFANQIL---SYGSE 180 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a-~~LGA---d~vI--d~~~~~~~d~~~~i~---~~~~g 180 (655)
.+.+|+|+||+|++|..+++.....|++|+++++++++.+.+ .+++. -+++ |..+. +++.+.+. +..++
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~ 82 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDE--ADVQRAVDAIVAAFGG 82 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCH--HHHHHHHHHHHHHcCC
Confidence 578999999999999999987777899999999988776544 33321 1222 33332 23333333 32347
Q ss_pred eeEEEeCCCc
Q psy14589 181 LDADHPGFTD 190 (655)
Q Consensus 181 vDvV~D~vG~ 190 (655)
+|+++.+.|.
T Consensus 83 ~d~vi~~ag~ 92 (237)
T PRK07326 83 LDVLIANAGV 92 (237)
T ss_pred CCEEEECCCC
Confidence 9999998864
No 236
>PRK07062 short chain dehydrogenase; Provisional
Probab=96.82 E-value=0.0064 Score=62.51 Aligned_cols=81 Identities=17% Similarity=0.088 Sum_probs=55.5
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hC-CCcEE----EeCCccc-hhHHHHHHHhcCC
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GL-GADYV----VDHTIRE-LDRFANQILSYGS 179 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~L-GAd~v----Id~~~~~-~~d~~~~i~~~~~ 179 (655)
.|++++|+||+||||...++.....|++|+++++++++.+.+. +. +...+ .|..+.. ..++.+.+.+..+
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 86 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFG 86 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 6889999999999999999888888999999999887765442 21 11122 3544431 1123333433335
Q ss_pred CeeEEEeCCCc
Q psy14589 180 ELDADHPGFTD 190 (655)
Q Consensus 180 gvDvV~D~vG~ 190 (655)
++|+++.++|.
T Consensus 87 ~id~li~~Ag~ 97 (265)
T PRK07062 87 GVDMLVNNAGQ 97 (265)
T ss_pred CCCEEEECCCC
Confidence 79999999884
No 237
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.82 E-value=0.0063 Score=65.57 Aligned_cols=98 Identities=13% Similarity=0.010 Sum_probs=69.1
Q ss_pred CCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecChHHHHHHH----hCCCcEEEeCCccchhHHHHHHHhcC
Q psy14589 105 PLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL--TVFASVGCPVGVAKAY----GLGADYVVDHTIRELDRFANQILSYG 178 (655)
Q Consensus 105 ~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga--~Viat~~s~~k~~~a~----~LGAd~vId~~~~~~~d~~~~i~~~~ 178 (655)
..+ ++|++||..|+ | .|..++.+|+..+. +|++++.+++..+.++ +.|.+.+..... |..+.....
T Consensus 76 L~i-~~g~~VLDIG~-G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~g----D~~~~~~~~- 147 (322)
T PRK13943 76 VGL-DKGMRVLEIGG-G-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVCG----DGYYGVPEF- 147 (322)
T ss_pred cCC-CCCCEEEEEeC-C-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeC----Chhhccccc-
Confidence 456 78999999998 4 69999999998864 6999999988665554 477765543222 222222211
Q ss_pred CCeeEEEeCCCcchHHHHHHHHHHhccccceEEE
Q psy14589 179 SELDADHPGFTDPVYRARRKYFADLAFNYKHFFF 212 (655)
Q Consensus 179 ~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v 212 (655)
+.+|+|+.+.|... .....++.|++||++++.
T Consensus 148 ~~fD~Ii~~~g~~~--ip~~~~~~LkpgG~Lvv~ 179 (322)
T PRK13943 148 APYDVIFVTVGVDE--VPETWFTQLKEGGRVIVP 179 (322)
T ss_pred CCccEEEECCchHH--hHHHHHHhcCCCCEEEEE
Confidence 36999998877652 145778899999998874
No 238
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=96.77 E-value=0.0032 Score=63.40 Aligned_cols=97 Identities=15% Similarity=0.106 Sum_probs=68.8
Q ss_pred CCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHH----HHhCCCcEEE-eCCccchhHHHHHHHhcC
Q psy14589 104 KPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAK----AYGLGADYVV-DHTIRELDRFANQILSYG 178 (655)
Q Consensus 104 ~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~----a~~LGAd~vI-d~~~~~~~d~~~~i~~~~ 178 (655)
...+ ++|++||-.|+ |.|-.++-+|+..| +|+.+.+.++-.+. ++.+|.+.|. ...+.. ..|. + .
T Consensus 67 ~L~~-~~g~~VLEIGt--GsGY~aAvla~l~~-~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gDG~-~G~~----~-~ 136 (209)
T COG2518 67 LLEL-KPGDRVLEIGT--GSGYQAAVLARLVG-RVVSIERIEELAEQARRNLETLGYENVTVRHGDGS-KGWP----E-E 136 (209)
T ss_pred HhCC-CCCCeEEEECC--CchHHHHHHHHHhC-eEEEEEEcHHHHHHHHHHHHHcCCCceEEEECCcc-cCCC----C-C
Confidence 3456 89999999996 78889999999888 99999988764444 4568986542 222210 0011 0 1
Q ss_pred CCeeEEEeCCCcchHHHHHHHHHHhccccceEEE
Q psy14589 179 SELDADHPGFTDPVYRARRKYFADLAFNYKHFFF 212 (655)
Q Consensus 179 ~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v 212 (655)
..+|.|+-+.+.+. .-+..++.|++|||+|..
T Consensus 137 aPyD~I~Vtaaa~~--vP~~Ll~QL~~gGrlv~P 168 (209)
T COG2518 137 APYDRIIVTAAAPE--VPEALLDQLKPGGRLVIP 168 (209)
T ss_pred CCcCEEEEeeccCC--CCHHHHHhcccCCEEEEE
Confidence 27999998887774 036778899999999986
No 239
>PRK07478 short chain dehydrogenase; Provisional
Probab=96.77 E-value=0.0084 Score=61.22 Aligned_cols=81 Identities=17% Similarity=0.108 Sum_probs=55.2
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcEE---EeCCccc-hhHHHHHHHhcCCCe
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADYV---VDHTIRE-LDRFANQILSYGSEL 181 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~gv 181 (655)
.|.+++|+||+||||...++.....|++|+.+++++++.+.+ ++.|.... .|..+.. .+.+.+.+.+..+++
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGL 84 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 578999999999999999987777899999999988776554 33443322 2443321 112333333333479
Q ss_pred eEEEeCCCc
Q psy14589 182 DADHPGFTD 190 (655)
Q Consensus 182 DvV~D~vG~ 190 (655)
|+++.++|.
T Consensus 85 d~li~~ag~ 93 (254)
T PRK07478 85 DIAFNNAGT 93 (254)
T ss_pred CEEEECCCC
Confidence 999998874
No 240
>PRK08177 short chain dehydrogenase; Provisional
Probab=96.74 E-value=0.0072 Score=60.69 Aligned_cols=77 Identities=22% Similarity=0.174 Sum_probs=53.2
Q ss_pred CEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEE--EeCCccchhHHHHHHHhcC-CCeeEEEeCC
Q psy14589 112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYV--VDHTIRELDRFANQILSYG-SELDADHPGF 188 (655)
Q Consensus 112 d~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~v--Id~~~~~~~d~~~~i~~~~-~gvDvV~D~v 188 (655)
.+|+|+|++|++|...++.....|++|+++++++++.+.+++++...+ +|..+. +++.+.+.+.. +++|+++.++
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~--~~~~~~~~~~~~~~id~vi~~a 79 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQALPGVHIEKLDMNDP--ASLDQLLQRLQGQRFDLLFVNA 79 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHhccccceEEcCCCCH--HHHHHHHHHhhcCCCCEEEEcC
Confidence 479999999999999888777789999999998877766665543333 343332 23333333332 3689999887
Q ss_pred Cc
Q psy14589 189 TD 190 (655)
Q Consensus 189 G~ 190 (655)
|.
T Consensus 80 g~ 81 (225)
T PRK08177 80 GI 81 (225)
T ss_pred cc
Confidence 64
No 241
>PRK05866 short chain dehydrogenase; Provisional
Probab=96.73 E-value=0.01 Score=62.74 Aligned_cols=82 Identities=18% Similarity=0.110 Sum_probs=55.7
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hCCCcE-E--EeCCccc-hhHHHHHHHhcCCCe
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GLGADY-V--VDHTIRE-LDRFANQILSYGSEL 181 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~LGAd~-v--Id~~~~~-~~d~~~~i~~~~~gv 181 (655)
.|.+|+|+||+||||...++.+...|++|+++++++++.+.+. +.|.+. + .|..+.. ...+.+.+.+..+++
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i 118 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGV 118 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999999999999888888999999999887765542 234322 2 2433321 112233333333479
Q ss_pred eEEEeCCCcc
Q psy14589 182 DADHPGFTDP 191 (655)
Q Consensus 182 DvV~D~vG~~ 191 (655)
|+++.++|..
T Consensus 119 d~li~~AG~~ 128 (293)
T PRK05866 119 DILINNAGRS 128 (293)
T ss_pred CEEEECCCCC
Confidence 9999998854
No 242
>PRK05854 short chain dehydrogenase; Provisional
Probab=96.72 E-value=0.0089 Score=63.72 Aligned_cols=81 Identities=17% Similarity=0.116 Sum_probs=54.8
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----h-C-CCc-E--EEeCCccc-hhHHHHHHHhcCC
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----G-L-GAD-Y--VVDHTIRE-LDRFANQILSYGS 179 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~-L-GAd-~--vId~~~~~-~~d~~~~i~~~~~ 179 (655)
.|.+++|+||+||||..+++.....|++|+.+++++++.+.+. + . +.. . .+|..+.. ...+.+.+.+..+
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~ 92 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGR 92 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 6889999999999999998877778999999999887765442 1 1 221 1 13544421 1223344444445
Q ss_pred CeeEEEeCCCc
Q psy14589 180 ELDADHPGFTD 190 (655)
Q Consensus 180 gvDvV~D~vG~ 190 (655)
++|+++.++|.
T Consensus 93 ~iD~li~nAG~ 103 (313)
T PRK05854 93 PIHLLINNAGV 103 (313)
T ss_pred CccEEEECCcc
Confidence 79999988874
No 243
>PRK06196 oxidoreductase; Provisional
Probab=96.72 E-value=0.0076 Score=64.07 Aligned_cols=81 Identities=22% Similarity=0.263 Sum_probs=54.5
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hCC-CcEE-EeCCccc-hhHHHHHHHhcCCCeeEEE
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GLG-ADYV-VDHTIRE-LDRFANQILSYGSELDADH 185 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~LG-Ad~v-Id~~~~~-~~d~~~~i~~~~~gvDvV~ 185 (655)
.|.+|+|+||+||||..+++.....|++|+++++++++.+.+. ++. ...+ .|..+.. ...+.+.+.+..+++|+++
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li 104 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDILI 104 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 6789999999999999998877778999999999887765543 332 2211 3444321 1122333333334799999
Q ss_pred eCCCc
Q psy14589 186 PGFTD 190 (655)
Q Consensus 186 D~vG~ 190 (655)
.++|.
T Consensus 105 ~nAg~ 109 (315)
T PRK06196 105 NNAGV 109 (315)
T ss_pred ECCCC
Confidence 98874
No 244
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.71 E-value=0.0063 Score=61.55 Aligned_cols=79 Identities=13% Similarity=0.024 Sum_probs=53.6
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hCC--CcE-E--EeCCccchhHHHHHHH---hcCCC
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GLG--ADY-V--VDHTIRELDRFANQIL---SYGSE 180 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~LG--Ad~-v--Id~~~~~~~d~~~~i~---~~~~g 180 (655)
.+.+|+|+||+|++|..+++.....|++|+++++++++.+.+. .+. ... . .|..+. +++.+.+. +..++
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~ 81 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDE--ADVEAAVAAALERFGS 81 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCH--HHHHHHHHHHHHHhCC
Confidence 5779999999999999999888888999999999987765542 222 211 1 233332 23333222 22347
Q ss_pred eeEEEeCCCc
Q psy14589 181 LDADHPGFTD 190 (655)
Q Consensus 181 vDvV~D~vG~ 190 (655)
+|+|+.+.|.
T Consensus 82 ~d~vi~~ag~ 91 (251)
T PRK07231 82 VDILVNNAGT 91 (251)
T ss_pred CCEEEECCCC
Confidence 8999998875
No 245
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=96.67 E-value=0.008 Score=67.06 Aligned_cols=71 Identities=17% Similarity=0.127 Sum_probs=55.6
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcC-CeEEEEecChHHHH-HHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeC
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYG-LTVFASVGCPVGVA-KAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPG 187 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~G-a~Viat~~s~~k~~-~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~ 187 (655)
+|++|+|.|+ |.+|.++++.++..| .+|++++++.++.+ .++.+|+. .++.. ++.+.+. ++|+|+.|
T Consensus 179 ~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~-~i~~~-----~l~~~l~----~aDvVi~a 247 (417)
T TIGR01035 179 KGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGE-AVKFE-----DLEEYLA----EADIVISS 247 (417)
T ss_pred cCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCe-EeeHH-----HHHHHHh----hCCEEEEC
Confidence 7899999999 999999999999999 48999999888754 56778874 33321 3333343 68999999
Q ss_pred CCcc
Q psy14589 188 FTDP 191 (655)
Q Consensus 188 vG~~ 191 (655)
+|++
T Consensus 248 T~s~ 251 (417)
T TIGR01035 248 TGAP 251 (417)
T ss_pred CCCC
Confidence 9887
No 246
>PRK05876 short chain dehydrogenase; Provisional
Probab=96.67 E-value=0.0096 Score=62.15 Aligned_cols=81 Identities=21% Similarity=0.148 Sum_probs=54.9
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcE---EEeCCccc-hhHHHHHHHhcCCCe
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADY---VVDHTIRE-LDRFANQILSYGSEL 181 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~---vId~~~~~-~~d~~~~i~~~~~gv 181 (655)
+|.+++|+||+||||..+++.....|++|+.+++++++.+.+ ++.|... ..|.++.. ..++.+.+.+..+++
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 84 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHV 84 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 688999999999999999988778899999999887665543 2345432 13444321 112233333334579
Q ss_pred eEEEeCCCc
Q psy14589 182 DADHPGFTD 190 (655)
Q Consensus 182 DvV~D~vG~ 190 (655)
|+++.+.|.
T Consensus 85 d~li~nAg~ 93 (275)
T PRK05876 85 DVVFSNAGI 93 (275)
T ss_pred CEEEECCCc
Confidence 999998884
No 247
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=96.66 E-value=0.01 Score=60.18 Aligned_cols=79 Identities=14% Similarity=0.059 Sum_probs=52.9
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChH--HHHHHHhCCCc-EE--EeCCccchhHHH---HHHHhcCCCe
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPV--GVAKAYGLGAD-YV--VDHTIRELDRFA---NQILSYGSEL 181 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~--k~~~a~~LGAd-~v--Id~~~~~~~d~~---~~i~~~~~gv 181 (655)
.|.+|+|+||+|+||..+++.....|++|+++++++. ..+.+++++.. .+ .|..+. +++. +.+.+..+++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~~ 81 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDI--EAIKALVDSAVEEFGHI 81 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCH--HHHHHHHHHHHHHcCCC
Confidence 6889999999999999988877778999999987652 12333455532 12 344432 2333 3333333479
Q ss_pred eEEEeCCCc
Q psy14589 182 DADHPGFTD 190 (655)
Q Consensus 182 DvV~D~vG~ 190 (655)
|+++.++|.
T Consensus 82 d~li~~ag~ 90 (248)
T TIGR01832 82 DILVNNAGI 90 (248)
T ss_pred CEEEECCCC
Confidence 999998875
No 248
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=96.66 E-value=0.012 Score=60.12 Aligned_cols=81 Identities=15% Similarity=0.048 Sum_probs=54.9
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcEE---EeCCccc-hhHHHHHHHhcCCCe
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADYV---VDHTIRE-LDRFANQILSYGSEL 181 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~gv 181 (655)
+|.+++|+|++|+||..+++.....|++|+++++++++.+.+ ++.|+... .|..+.. .+++.+.+.+..+++
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 85 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSV 85 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 578999999999999999988888899999999988655433 34555432 2333321 112223333333478
Q ss_pred eEEEeCCCc
Q psy14589 182 DADHPGFTD 190 (655)
Q Consensus 182 DvV~D~vG~ 190 (655)
|+++.++|.
T Consensus 86 d~vi~~ag~ 94 (262)
T PRK13394 86 DILVSNAGI 94 (262)
T ss_pred CEEEECCcc
Confidence 999998875
No 249
>PRK06194 hypothetical protein; Provisional
Probab=96.65 E-value=0.0085 Score=62.34 Aligned_cols=80 Identities=19% Similarity=0.154 Sum_probs=53.8
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hCCCcE-E--EeCCccchhHHH---HHHHhcCC
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GLGADY-V--VDHTIRELDRFA---NQILSYGS 179 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~LGAd~-v--Id~~~~~~~d~~---~~i~~~~~ 179 (655)
.+.+|||+||+|+||..+++.....|++|++++++.++.+.+. ..|... + .|.++. +++. +.+.+..+
T Consensus 5 ~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~--~~~~~~~~~~~~~~g 82 (287)
T PRK06194 5 AGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDA--AQVEALADAALERFG 82 (287)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCH--HHHHHHHHHHHHHcC
Confidence 5789999999999999999887788999999998876654432 224332 1 243332 2332 23333334
Q ss_pred CeeEEEeCCCcc
Q psy14589 180 ELDADHPGFTDP 191 (655)
Q Consensus 180 gvDvV~D~vG~~ 191 (655)
++|+++.++|..
T Consensus 83 ~id~vi~~Ag~~ 94 (287)
T PRK06194 83 AVHLLFNNAGVG 94 (287)
T ss_pred CCCEEEECCCCC
Confidence 789999998863
No 250
>PRK06198 short chain dehydrogenase; Provisional
Probab=96.65 E-value=0.0094 Score=60.89 Aligned_cols=79 Identities=15% Similarity=0.024 Sum_probs=54.7
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecChHHHH----HHHhCCCcE---EEeCCccchhHHHHH---HHhcC
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLT-VFASVGCPVGVA----KAYGLGADY---VVDHTIRELDRFANQ---ILSYG 178 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~-Viat~~s~~k~~----~a~~LGAd~---vId~~~~~~~d~~~~---i~~~~ 178 (655)
++.+|+|+|++|+||..+++.....|++ |+++++++++.+ .+++.|... ..|..+. +++.+. +.+.-
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~ 82 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDV--EDCRRVVAAADEAF 82 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCH--HHHHHHHHHHHHHh
Confidence 6789999999999999999988889998 999988876554 233455432 2355443 223332 22222
Q ss_pred CCeeEEEeCCCc
Q psy14589 179 SELDADHPGFTD 190 (655)
Q Consensus 179 ~gvDvV~D~vG~ 190 (655)
+++|+++.+.|.
T Consensus 83 g~id~li~~ag~ 94 (260)
T PRK06198 83 GRLDALVNAAGL 94 (260)
T ss_pred CCCCEEEECCCc
Confidence 479999999985
No 251
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=96.65 E-value=0.0057 Score=64.40 Aligned_cols=103 Identities=18% Similarity=0.039 Sum_probs=64.4
Q ss_pred HHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hCCCcE--EEeCCccchhHHHH
Q psy14589 99 IRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GLGADY--VVDHTIRELDRFAN 172 (655)
Q Consensus 99 ~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~LGAd~--vId~~~~~~~d~~~ 172 (655)
..+.+..++ ++|++||-.|+ |-|.+++.+|+..|++|++++.|++..+.++ +.|... .|... |+.
T Consensus 52 ~~~~~~~~l-~~G~~vLDiGc--GwG~~~~~~a~~~g~~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~-----D~~- 122 (273)
T PF02353_consen 52 DLLCEKLGL-KPGDRVLDIGC--GWGGLAIYAAERYGCHVTGITLSEEQAEYARERIREAGLEDRVEVRLQ-----DYR- 122 (273)
T ss_dssp HHHHTTTT---TT-EEEEES---TTSHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES------GG-
T ss_pred HHHHHHhCC-CCCCEEEEeCC--CccHHHHHHHHHcCcEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEe-----ecc-
Confidence 345577788 99999999998 5888999999999999999999998877764 566321 12111 111
Q ss_pred HHHhcCCCeeEE-----EeCCCcchH-HHHHHHHHHhccccceEEEe
Q psy14589 173 QILSYGSELDAD-----HPGFTDPVY-RARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 173 ~i~~~~~gvDvV-----~D~vG~~~~-~~l~~~l~~l~~gGrlv~v~ 213 (655)
+....+|.| ++.+|.+.+ .-++.+-+.|+|||++++=.
T Consensus 123 ---~~~~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq~ 166 (273)
T PF02353_consen 123 ---DLPGKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQT 166 (273)
T ss_dssp ---G---S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETTEEEEEEE
T ss_pred ---ccCCCCCEEEEEechhhcChhHHHHHHHHHHHhcCCCcEEEEEe
Confidence 111257776 467775522 34688888999999998653
No 252
>PRK07890 short chain dehydrogenase; Provisional
Probab=96.65 E-value=0.011 Score=60.35 Aligned_cols=79 Identities=19% Similarity=0.123 Sum_probs=54.2
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hCCCc---EEEeCCccchhHHHH---HHHhcCC
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GLGAD---YVVDHTIRELDRFAN---QILSYGS 179 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~LGAd---~vId~~~~~~~d~~~---~i~~~~~ 179 (655)
++.+|+|+||+|+||..+++.....|++|+++++++++.+.+. +.|.. ...|..+. +++.. .+.+..+
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~g 81 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDE--DQCANLVALALERFG 81 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCH--HHHHHHHHHHHHHcC
Confidence 6789999999999999999888889999999999887665443 22332 22344332 22332 2322234
Q ss_pred CeeEEEeCCCc
Q psy14589 180 ELDADHPGFTD 190 (655)
Q Consensus 180 gvDvV~D~vG~ 190 (655)
++|+++.+.|.
T Consensus 82 ~~d~vi~~ag~ 92 (258)
T PRK07890 82 RVDALVNNAFR 92 (258)
T ss_pred CccEEEECCcc
Confidence 78999998874
No 253
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=96.65 E-value=0.014 Score=52.44 Aligned_cols=99 Identities=17% Similarity=0.125 Sum_probs=66.3
Q ss_pred CCCCCCCEEEEEcCCCchHHHHHHHHHHcC-CeEEEEecChHHHHHHH----hCCCcEE--EeCCccchhHHHHHHHhcC
Q psy14589 106 LYTPEPDTLFIIGANRGNGLAAIQVGKAYG-LTVFASVGCPVGVAKAY----GLGADYV--VDHTIRELDRFANQILSYG 178 (655)
Q Consensus 106 ~l~~~Gd~VLI~GasGgVG~~avQlAk~~G-a~Viat~~s~~k~~~a~----~LGAd~v--Id~~~~~~~d~~~~i~~~~ 178 (655)
.+ +++++|+-.|+ |.|..+..+++..+ .+|++++.++...+.++ ..+...+ +... .........
T Consensus 16 ~~-~~~~~vldlG~--G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 86 (124)
T TIGR02469 16 RL-RPGDVLWDIGA--GSGSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGD------APEALEDSL 86 (124)
T ss_pred CC-CCCCEEEEeCC--CCCHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEecc------ccccChhhc
Confidence 44 57889999998 44999999999874 59999999988777654 3454332 2211 111111112
Q ss_pred CCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589 179 SELDADHPGFTDP-VYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 179 ~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
..+|+|+-..+.. ..+.++.+.+.|++||++++-+
T Consensus 87 ~~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~li~~~ 122 (124)
T TIGR02469 87 PEPDRVFIGGSGGLLQEILEAIWRRLRPGGRIVLNA 122 (124)
T ss_pred CCCCEEEECCcchhHHHHHHHHHHHcCCCCEEEEEe
Confidence 3689988654332 2345889999999999988754
No 254
>PRK07677 short chain dehydrogenase; Provisional
Probab=96.64 E-value=0.008 Score=61.35 Aligned_cols=80 Identities=19% Similarity=0.138 Sum_probs=53.4
Q ss_pred CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hCCCc-EEE--eCCccc-hhHHHHHHHhcCCCee
Q psy14589 111 PDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GLGAD-YVV--DHTIRE-LDRFANQILSYGSELD 182 (655)
Q Consensus 111 Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~LGAd-~vI--d~~~~~-~~d~~~~i~~~~~gvD 182 (655)
|++++|+|++|+||..+++.....|++|+++++++++.+.+. +.+.. .++ |.++.. ...+.+.+.+..+++|
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID 80 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence 578999999999999999988889999999998877655442 23322 223 443321 1122233333334789
Q ss_pred EEEeCCCc
Q psy14589 183 ADHPGFTD 190 (655)
Q Consensus 183 vV~D~vG~ 190 (655)
+++.+.|.
T Consensus 81 ~lI~~ag~ 88 (252)
T PRK07677 81 ALINNAAG 88 (252)
T ss_pred EEEECCCC
Confidence 99999874
No 255
>PRK07774 short chain dehydrogenase; Provisional
Probab=96.64 E-value=0.0085 Score=60.75 Aligned_cols=81 Identities=17% Similarity=0.097 Sum_probs=53.9
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hCCCc-E--EEeCCccc-hhHHHHHHHhcCCCe
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GLGAD-Y--VVDHTIRE-LDRFANQILSYGSEL 181 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~LGAd-~--vId~~~~~-~~d~~~~i~~~~~gv 181 (655)
+|.+++|+|++|+||..+++.....|++|+++++++++.+.+. +.+.. . ..|..+.. ..++.+.+.+..+++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 84 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGI 84 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 5789999999999999999877778999999999876554432 22321 1 23444321 112233333333479
Q ss_pred eEEEeCCCc
Q psy14589 182 DADHPGFTD 190 (655)
Q Consensus 182 DvV~D~vG~ 190 (655)
|+||.++|.
T Consensus 85 d~vi~~ag~ 93 (250)
T PRK07774 85 DYLVNNAAI 93 (250)
T ss_pred CEEEECCCC
Confidence 999999884
No 256
>PRK09186 flagellin modification protein A; Provisional
Probab=96.63 E-value=0.012 Score=59.83 Aligned_cols=78 Identities=15% Similarity=0.049 Sum_probs=53.4
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH-Hh----CCCcE----EEeCCccchhHHHH---HHHhc
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA-YG----LGADY----VVDHTIRELDRFAN---QILSY 177 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a-~~----LGAd~----vId~~~~~~~d~~~---~i~~~ 177 (655)
+|.+|+|+||+|+||..++......|++|+++++++++.+.+ .+ .+... ..|..+. +++.+ .+.+.
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~--~~~~~~~~~~~~~ 80 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQ--ESLEEFLSKSAEK 80 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCH--HHHHHHHHHHHHH
Confidence 578999999999999999988888899999999888776544 22 23221 2354443 23333 33332
Q ss_pred CCCeeEEEeCCC
Q psy14589 178 GSELDADHPGFT 189 (655)
Q Consensus 178 ~~gvDvV~D~vG 189 (655)
.+++|+++.+.|
T Consensus 81 ~~~id~vi~~A~ 92 (256)
T PRK09186 81 YGKIDGAVNCAY 92 (256)
T ss_pred cCCccEEEECCc
Confidence 346899999885
No 257
>PRK09291 short chain dehydrogenase; Provisional
Probab=96.61 E-value=0.0096 Score=60.64 Aligned_cols=75 Identities=23% Similarity=0.099 Sum_probs=51.6
Q ss_pred CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hCCCcE-E--EeCCccchhHHHHHHHhcCCCeeE
Q psy14589 111 PDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GLGADY-V--VDHTIRELDRFANQILSYGSELDA 183 (655)
Q Consensus 111 Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~LGAd~-v--Id~~~~~~~d~~~~i~~~~~gvDv 183 (655)
+.+|+|+||+|+||..+++.+...|++|+++++++++.+.++ ..|... + .|..+. +++.+. ...++|+
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~---~~~~id~ 76 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDA--IDRAQA---AEWDVDV 76 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCH--HHHHHH---hcCCCCE
Confidence 468999999999999999998889999999999877655543 233221 1 344432 122221 2237999
Q ss_pred EEeCCCc
Q psy14589 184 DHPGFTD 190 (655)
Q Consensus 184 V~D~vG~ 190 (655)
++.+.|.
T Consensus 77 vi~~ag~ 83 (257)
T PRK09291 77 LLNNAGI 83 (257)
T ss_pred EEECCCc
Confidence 9999873
No 258
>PRK06483 dihydromonapterin reductase; Provisional
Probab=96.61 E-value=0.012 Score=59.36 Aligned_cols=80 Identities=23% Similarity=0.224 Sum_probs=53.5
Q ss_pred CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHH-HHHHHhCCCcEE-EeCCccc-hhHHHHHHHhcCCCeeEEEeC
Q psy14589 111 PDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVG-VAKAYGLGADYV-VDHTIRE-LDRFANQILSYGSELDADHPG 187 (655)
Q Consensus 111 Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k-~~~a~~LGAd~v-Id~~~~~-~~d~~~~i~~~~~gvDvV~D~ 187 (655)
+.+++|+||+||||..+++.....|++|+++++++++ .+.++..|+..+ .|..+.. .+.+.+.+.+..+++|+++.+
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ 81 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIHN 81 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEEC
Confidence 4689999999999999998887889999999887644 334455665322 3443321 112333333333479999998
Q ss_pred CCc
Q psy14589 188 FTD 190 (655)
Q Consensus 188 vG~ 190 (655)
.|.
T Consensus 82 ag~ 84 (236)
T PRK06483 82 ASD 84 (236)
T ss_pred Ccc
Confidence 874
No 259
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=96.61 E-value=0.013 Score=58.72 Aligned_cols=79 Identities=19% Similarity=0.045 Sum_probs=54.4
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcEE---EeCCccchhHHHHHHHh---cCC
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADYV---VDHTIRELDRFANQILS---YGS 179 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~v---Id~~~~~~~d~~~~i~~---~~~ 179 (655)
++.+|+|+||+|++|..+++.....|.+|+++++++++.+.+ ++.|.... .|..+. +++.+.+.+ .-+
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~ 81 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDE--AAVRALIEAAVEAFG 81 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCH--HHHHHHHHHHHHHhC
Confidence 567899999999999999988888899999999988765443 33454332 244432 123333322 223
Q ss_pred CeeEEEeCCCc
Q psy14589 180 ELDADHPGFTD 190 (655)
Q Consensus 180 gvDvV~D~vG~ 190 (655)
++|+++.++|.
T Consensus 82 ~id~vi~~ag~ 92 (246)
T PRK05653 82 ALDILVNNAGI 92 (246)
T ss_pred CCCEEEECCCc
Confidence 68999999876
No 260
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=96.60 E-value=0.0089 Score=61.04 Aligned_cols=81 Identities=17% Similarity=0.105 Sum_probs=54.6
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcE-E--EeCCccc-hhHHHHHHHhcCCCe
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADY-V--VDHTIRE-LDRFANQILSYGSEL 181 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~-v--Id~~~~~-~~d~~~~i~~~~~gv 181 (655)
+|.+|+|+||+|++|..+++.....|++|+++++++++.+.+ ++.|... . .|..+.. ...+.+.+.+..+++
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 88 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPI 88 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 688999999999999999988777899999999987765443 2334322 1 2444421 112223333333478
Q ss_pred eEEEeCCCc
Q psy14589 182 DADHPGFTD 190 (655)
Q Consensus 182 DvV~D~vG~ 190 (655)
|+++.++|.
T Consensus 89 d~li~~ag~ 97 (255)
T PRK07523 89 DILVNNAGM 97 (255)
T ss_pred CEEEECCCC
Confidence 999999875
No 261
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=96.59 E-value=0.013 Score=60.09 Aligned_cols=81 Identities=16% Similarity=0.125 Sum_probs=53.4
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHH--HHHHHhCCCcE---EEeCCccc-hhHHHHHHHhcCCCeeE
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVG--VAKAYGLGADY---VVDHTIRE-LDRFANQILSYGSELDA 183 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k--~~~a~~LGAd~---vId~~~~~-~~d~~~~i~~~~~gvDv 183 (655)
.|++++|+||+||||..+++.....|++|+++++++.. .+.+++.|... .+|..+.. .+.+.+.+.+..+++|+
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~ 86 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHIDI 86 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 68899999999999999998887899999888765422 22334555432 23554431 11223333333457999
Q ss_pred EEeCCCc
Q psy14589 184 DHPGFTD 190 (655)
Q Consensus 184 V~D~vG~ 190 (655)
++.+.|.
T Consensus 87 lv~~ag~ 93 (251)
T PRK12481 87 LINNAGI 93 (251)
T ss_pred EEECCCc
Confidence 9998874
No 262
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.59 E-value=0.011 Score=61.67 Aligned_cols=81 Identities=15% Similarity=0.037 Sum_probs=53.5
Q ss_pred CCCEEEEEcCCC--chHHHHHHHHHHcCCeEEEEecChHHH---HHH-HhCCCcEE--EeCCccc-hhHHHHHHHhcCCC
Q psy14589 110 EPDTLFIIGANR--GNGLAAIQVGKAYGLTVFASVGCPVGV---AKA-YGLGADYV--VDHTIRE-LDRFANQILSYGSE 180 (655)
Q Consensus 110 ~Gd~VLI~GasG--gVG~~avQlAk~~Ga~Viat~~s~~k~---~~a-~~LGAd~v--Id~~~~~-~~d~~~~i~~~~~g 180 (655)
+|++++|+||++ |||..+++.....|++|+.++++++.. +.+ .++|.... .|..+.. .+.+.+.+.+..+.
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 85 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWGK 85 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence 688999999986 999999887777899999888765322 222 34564433 3444431 12333444443357
Q ss_pred eeEEEeCCCc
Q psy14589 181 LDADHPGFTD 190 (655)
Q Consensus 181 vDvV~D~vG~ 190 (655)
+|+++.++|.
T Consensus 86 iD~lVnnAG~ 95 (271)
T PRK06505 86 LDFVVHAIGF 95 (271)
T ss_pred CCEEEECCcc
Confidence 9999999874
No 263
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=96.59 E-value=0.0073 Score=56.69 Aligned_cols=75 Identities=15% Similarity=0.106 Sum_probs=55.6
Q ss_pred CCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCe-EEEEecChHHHHHHH-hCCCc--EEEeCCccchhHHHHHHHhcCCC
Q psy14589 105 PLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLT-VFASVGCPVGVAKAY-GLGAD--YVVDHTIRELDRFANQILSYGSE 180 (655)
Q Consensus 105 ~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~-Viat~~s~~k~~~a~-~LGAd--~vId~~~~~~~d~~~~i~~~~~g 180 (655)
+.+ +|.+|+|.|+ ||+|..++..+...|++ |+.+.|+.+|.+.+. .++.. .++++. ++.+.+. .
T Consensus 8 ~~l--~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~-----~~~~~~~----~ 75 (135)
T PF01488_consen 8 GDL--KGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLE-----DLEEALQ----E 75 (135)
T ss_dssp STG--TTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGG-----GHCHHHH----T
T ss_pred CCc--CCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHH-----HHHHHHh----h
Confidence 355 7999999999 99999999999999995 999999998877664 45332 344443 2333333 5
Q ss_pred eeEEEeCCCcc
Q psy14589 181 LDADHPGFTDP 191 (655)
Q Consensus 181 vDvV~D~vG~~ 191 (655)
+|+|+.|++..
T Consensus 76 ~DivI~aT~~~ 86 (135)
T PF01488_consen 76 ADIVINATPSG 86 (135)
T ss_dssp ESEEEE-SSTT
T ss_pred CCeEEEecCCC
Confidence 89999999877
No 264
>KOG1205|consensus
Probab=96.58 E-value=0.0051 Score=64.89 Aligned_cols=80 Identities=15% Similarity=0.061 Sum_probs=54.1
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcE-EE----eCCccchhHHHH---HHHhc
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADY-VV----DHTIRELDRFAN---QILSY 177 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~-vI----d~~~~~~~d~~~---~i~~~ 177 (655)
.|+.|+|+|||+|||..++--...+|++++.+++..++++.+ +++|+.. ++ |-++. ++..+ ++.+.
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~--~~~~~~~~~~~~~ 88 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDE--ESVKKFVEWAIRH 88 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCH--HHHHHHHHHHHHh
Confidence 789999999999999876655555799888888877766655 5566554 32 33332 23333 33333
Q ss_pred CCCeeEEEeCCCcc
Q psy14589 178 GSELDADHPGFTDP 191 (655)
Q Consensus 178 ~~gvDvV~D~vG~~ 191 (655)
-+++|+.++..|-.
T Consensus 89 fg~vDvLVNNAG~~ 102 (282)
T KOG1205|consen 89 FGRVDVLVNNAGIS 102 (282)
T ss_pred cCCCCEEEecCccc
Confidence 45899999887743
No 265
>PRK07063 short chain dehydrogenase; Provisional
Probab=96.57 E-value=0.0091 Score=61.17 Aligned_cols=81 Identities=17% Similarity=0.011 Sum_probs=54.0
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-h-----CCCc-EE--EeCCccc-hhHHHHHHHhcCC
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-G-----LGAD-YV--VDHTIRE-LDRFANQILSYGS 179 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~-----LGAd-~v--Id~~~~~-~~d~~~~i~~~~~ 179 (655)
.|++|+|+|++||||..+++.....|++|+.+++++++.+.+. + .+.. .+ .|..+.. ...+.+.+.+..+
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 85 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFG 85 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 6789999999999999999888788999999999877665442 2 2221 11 2444321 1122333333334
Q ss_pred CeeEEEeCCCc
Q psy14589 180 ELDADHPGFTD 190 (655)
Q Consensus 180 gvDvV~D~vG~ 190 (655)
++|+++.++|.
T Consensus 86 ~id~li~~ag~ 96 (260)
T PRK07063 86 PLDVLVNNAGI 96 (260)
T ss_pred CCcEEEECCCc
Confidence 79999998874
No 266
>KOG1201|consensus
Probab=96.55 E-value=0.008 Score=63.38 Aligned_cols=82 Identities=20% Similarity=0.146 Sum_probs=56.2
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHH----HHHHHhCC-C-cEEEeCCccc-hhHHHHHHHhcCCCee
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVG----VAKAYGLG-A-DYVVDHTIRE-LDRFANQILSYGSELD 182 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k----~~~a~~LG-A-d~vId~~~~~-~~d~~~~i~~~~~gvD 182 (655)
.|+.|||+||++|+|...++=...+|++++..|.+.+. .+.+++.| | ..+.|-++.+ ....++++++.-+.+|
T Consensus 37 ~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G~V~ 116 (300)
T KOG1201|consen 37 SGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVGDVD 116 (300)
T ss_pred cCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcCCce
Confidence 89999999999999987766555579988888776543 34455555 1 2334555431 1234566666666899
Q ss_pred EEEeCCCcc
Q psy14589 183 ADHPGFTDP 191 (655)
Q Consensus 183 vV~D~vG~~ 191 (655)
++++.+|--
T Consensus 117 ILVNNAGI~ 125 (300)
T KOG1201|consen 117 ILVNNAGIV 125 (300)
T ss_pred EEEeccccc
Confidence 999988753
No 267
>PRK08589 short chain dehydrogenase; Validated
Probab=96.54 E-value=0.011 Score=61.40 Aligned_cols=80 Identities=24% Similarity=0.190 Sum_probs=52.8
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHH-H---HhCCCc---EEEeCCccc-hhHHHHHHHhcCCCe
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAK-A---YGLGAD---YVVDHTIRE-LDRFANQILSYGSEL 181 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~-a---~~LGAd---~vId~~~~~-~~d~~~~i~~~~~gv 181 (655)
+|++++|+||+||||...++.....|++|++++++ ++.+. + ++.|.. ..+|..+.. ...+.+.+.+..+++
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 83 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRV 83 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 68899999999999999888777789999999988 44332 2 233422 124444421 112333444334578
Q ss_pred eEEEeCCCc
Q psy14589 182 DADHPGFTD 190 (655)
Q Consensus 182 DvV~D~vG~ 190 (655)
|+++.++|.
T Consensus 84 d~li~~Ag~ 92 (272)
T PRK08589 84 DVLFNNAGV 92 (272)
T ss_pred CEEEECCCC
Confidence 999998874
No 268
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=96.54 E-value=0.012 Score=62.67 Aligned_cols=80 Identities=25% Similarity=0.273 Sum_probs=53.7
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hCC---Cc-EE--EeCCccc-hhHHHHHHHhcCCCe
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GLG---AD-YV--VDHTIRE-LDRFANQILSYGSEL 181 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~LG---Ad-~v--Id~~~~~-~~d~~~~i~~~~~gv 181 (655)
.+.+|+|+||+||||..+++.....|++|+++++++++.+.+. +++ .. .+ .|..+.. ...+.+.+.+..+++
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 84 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPL 84 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence 5789999999999999999877778999999999887765542 332 11 11 3444321 112233333334469
Q ss_pred eEEEeCCC
Q psy14589 182 DADHPGFT 189 (655)
Q Consensus 182 DvV~D~vG 189 (655)
|+++.++|
T Consensus 85 D~li~nAg 92 (322)
T PRK07453 85 DALVCNAA 92 (322)
T ss_pred cEEEECCc
Confidence 99999887
No 269
>CHL00194 ycf39 Ycf39; Provisional
Probab=96.53 E-value=0.015 Score=61.90 Aligned_cols=72 Identities=19% Similarity=0.174 Sum_probs=52.5
Q ss_pred EEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEE-eCCccchhHHHHHHHhcCCCeeEEEeCCCc
Q psy14589 113 TLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVV-DHTIRELDRFANQILSYGSELDADHPGFTD 190 (655)
Q Consensus 113 ~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vI-d~~~~~~~d~~~~i~~~~~gvDvV~D~vG~ 190 (655)
+|+|+||+|-+|..+++.+...|.+|++++++.++...+...|++.+. |..+. +++.+.+ .++|+|+.+++.
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~~~v~~v~~Dl~d~--~~l~~al----~g~d~Vi~~~~~ 74 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKEWGAELVYGDLSLP--ETLPPSF----KGVTAIIDASTS 74 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhhcCCEEEECCCCCH--HHHHHHH----CCCCEEEECCCC
Confidence 699999999999999988888899999999987766555566765442 33332 2333333 268999998764
No 270
>PRK08862 short chain dehydrogenase; Provisional
Probab=96.53 E-value=0.013 Score=59.45 Aligned_cols=81 Identities=12% Similarity=0.045 Sum_probs=55.3
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcEE---EeCCccc-hhHHHHHHHhcCC-C
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADYV---VDHTIRE-LDRFANQILSYGS-E 180 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~-g 180 (655)
.|.+++|+|+++|+|...++-....|++|+.+++++++++.+ ++.|.... .|..+.. ..++.+.+.+..+ +
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 83 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRA 83 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 688999999999999988887777899999999988776544 33454322 2433321 1123333333334 7
Q ss_pred eeEEEeCCCc
Q psy14589 181 LDADHPGFTD 190 (655)
Q Consensus 181 vDvV~D~vG~ 190 (655)
+|+++.+.|.
T Consensus 84 iD~li~nag~ 93 (227)
T PRK08862 84 PDVLVNNWTS 93 (227)
T ss_pred CCEEEECCcc
Confidence 9999999874
No 271
>PRK07024 short chain dehydrogenase; Provisional
Probab=96.53 E-value=0.012 Score=60.23 Aligned_cols=78 Identities=21% Similarity=0.097 Sum_probs=52.4
Q ss_pred CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh-CCCc-EE----EeCCccchhHHHH---HHHhcCCCe
Q psy14589 111 PDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG-LGAD-YV----VDHTIRELDRFAN---QILSYGSEL 181 (655)
Q Consensus 111 Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~-LGAd-~v----Id~~~~~~~d~~~---~i~~~~~gv 181 (655)
+.+|+|+||+|++|..+++.....|++|+++++++++.+.+.+ +... .+ .|.++. +++.+ .+.+..+.+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~--~~i~~~~~~~~~~~g~i 79 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDA--DALAAAAADFIAAHGLP 79 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCH--HHHHHHHHHHHHhCCCC
Confidence 4689999999999999998777789999999998877665432 2211 11 344432 23333 233323468
Q ss_pred eEEEeCCCc
Q psy14589 182 DADHPGFTD 190 (655)
Q Consensus 182 DvV~D~vG~ 190 (655)
|+++.++|.
T Consensus 80 d~lv~~ag~ 88 (257)
T PRK07024 80 DVVIANAGI 88 (257)
T ss_pred CEEEECCCc
Confidence 999998874
No 272
>PRK12937 short chain dehydrogenase; Provisional
Probab=96.52 E-value=0.038 Score=55.72 Aligned_cols=79 Identities=15% Similarity=0.081 Sum_probs=50.4
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChH-HHH----HHHhCCCc-EE--EeCCccchhHHHH---HHHhcC
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPV-GVA----KAYGLGAD-YV--VDHTIRELDRFAN---QILSYG 178 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~-k~~----~a~~LGAd-~v--Id~~~~~~~d~~~---~i~~~~ 178 (655)
++.+++|+|++|++|..+++.....|++|+.+.++.. +.+ .+.+.+.. .+ .|..+. +++.+ .+.+..
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~--~~~~~~~~~~~~~~ 81 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADA--AAVTRLFDAAETAF 81 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCH--HHHHHHHHHHHHHc
Confidence 6789999999999999999888888999887765432 222 22334432 11 233332 22333 333333
Q ss_pred CCeeEEEeCCCc
Q psy14589 179 SELDADHPGFTD 190 (655)
Q Consensus 179 ~gvDvV~D~vG~ 190 (655)
+++|+++.+.|.
T Consensus 82 ~~id~vi~~ag~ 93 (245)
T PRK12937 82 GRIDVLVNNAGV 93 (245)
T ss_pred CCCCEEEECCCC
Confidence 478999998874
No 273
>PRK08703 short chain dehydrogenase; Provisional
Probab=96.51 E-value=0.013 Score=59.16 Aligned_cols=81 Identities=23% Similarity=0.238 Sum_probs=54.2
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hCCCc----EEEeCCcc---chhHHHHHHHhcC
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GLGAD----YVVDHTIR---ELDRFANQILSYG 178 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~LGAd----~vId~~~~---~~~d~~~~i~~~~ 178 (655)
+|.+|+|+|++|++|..+++.....|++|+++++++++.+.+. +.+.. .-+|..+. ..+.+.+.+.+..
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~ 84 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEAT 84 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHh
Confidence 5789999999999999999888888999999999887665442 22321 11333211 1112333444333
Q ss_pred -CCeeEEEeCCCc
Q psy14589 179 -SELDADHPGFTD 190 (655)
Q Consensus 179 -~gvDvV~D~vG~ 190 (655)
+.+|+++.++|.
T Consensus 85 ~~~id~vi~~ag~ 97 (239)
T PRK08703 85 QGKLDGIVHCAGY 97 (239)
T ss_pred CCCCCEEEEeccc
Confidence 478999998884
No 274
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.51 E-value=0.0034 Score=70.22 Aligned_cols=92 Identities=16% Similarity=0.078 Sum_probs=61.0
Q ss_pred cCCCCCCCCCEEE----EEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc-EEEeCCccchhHHHHHHHhc
Q psy14589 103 SKPLYTPEPDTLF----IIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD-YVVDHTIRELDRFANQILSY 177 (655)
Q Consensus 103 ~~~~l~~~Gd~VL----I~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd-~vId~~~~~~~d~~~~i~~~ 177 (655)
...++ ++|++|+ |+||+||+|..++|+++..|++|+++.+++.+....+..+.+ .++|.+.. +..+.+...
T Consensus 27 ~l~~~-~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~~~~l~~~ 102 (450)
T PRK08261 27 PLRRY-RPGQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAAGWGDRFGALVFDATGI---TDPADLKAL 102 (450)
T ss_pred cccCC-CCCCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCccccccccCcCCcccEEEEECCCC---CCHHHHHHH
Confidence 44566 7899998 999999999999999999999999987666544333444444 34554432 111122111
Q ss_pred CCCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589 178 GSELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 178 ~~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
++.....++.|.++||+|.++
T Consensus 103 ---------------~~~~~~~l~~l~~~griv~i~ 123 (450)
T PRK08261 103 ---------------YEFFHPVLRSLAPCGRVVVLG 123 (450)
T ss_pred ---------------HHHHHHHHHhccCCCEEEEEc
Confidence 122566677777888887775
No 275
>PLN02780 ketoreductase/ oxidoreductase
Probab=96.51 E-value=0.013 Score=62.85 Aligned_cols=81 Identities=14% Similarity=0.061 Sum_probs=53.3
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----h-CCCcE----EEeCCccchhHHHHHHHhc-C
Q psy14589 109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----G-LGADY----VVDHTIRELDRFANQILSY-G 178 (655)
Q Consensus 109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~-LGAd~----vId~~~~~~~d~~~~i~~~-~ 178 (655)
+.|.+++|+||+||||...++.....|++|+.+++++++++.+. + .+... .+|..+. ..+..+.+.+. +
T Consensus 51 ~~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~-~~~~~~~l~~~~~ 129 (320)
T PLN02780 51 KYGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGD-IDEGVKRIKETIE 129 (320)
T ss_pred ccCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCC-cHHHHHHHHHHhc
Confidence 36899999999999999888766668999999999998876542 1 22112 2344321 01233334333 3
Q ss_pred C-CeeEEEeCCCc
Q psy14589 179 S-ELDADHPGFTD 190 (655)
Q Consensus 179 ~-gvDvV~D~vG~ 190 (655)
+ ++|+++.++|.
T Consensus 130 ~~didilVnnAG~ 142 (320)
T PLN02780 130 GLDVGVLINNVGV 142 (320)
T ss_pred CCCccEEEEecCc
Confidence 2 56789988874
No 276
>PRK07985 oxidoreductase; Provisional
Probab=96.50 E-value=0.033 Score=58.76 Aligned_cols=81 Identities=15% Similarity=-0.009 Sum_probs=50.8
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh--HHHHHH----HhCCCcE---EEeCCccc-hhHHHHHHHhcCC
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCP--VGVAKA----YGLGADY---VVDHTIRE-LDRFANQILSYGS 179 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~--~k~~~a----~~LGAd~---vId~~~~~-~~d~~~~i~~~~~ 179 (655)
+|.+++|+||+||||..+++.....|++|+++.++. ++.+.+ ++.|... ..|..+.. ...+.+.+.+..+
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 127 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALG 127 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 678999999999999999988878899998876542 222222 3344322 23444321 1122233333334
Q ss_pred CeeEEEeCCCc
Q psy14589 180 ELDADHPGFTD 190 (655)
Q Consensus 180 gvDvV~D~vG~ 190 (655)
++|+++.+.|.
T Consensus 128 ~id~lv~~Ag~ 138 (294)
T PRK07985 128 GLDIMALVAGK 138 (294)
T ss_pred CCCEEEECCCC
Confidence 78999988773
No 277
>PRK06701 short chain dehydrogenase; Provisional
Probab=96.50 E-value=0.033 Score=58.64 Aligned_cols=81 Identities=12% Similarity=-0.004 Sum_probs=51.0
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHH-HH----HHHhCCCcEE---EeCCccc-hhHHHHHHHhcCCC
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVG-VA----KAYGLGADYV---VDHTIRE-LDRFANQILSYGSE 180 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k-~~----~a~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~g 180 (655)
.|.+++|+||+|+||..+++.....|++|+.+++++++ .+ .++..|.... .|..+.. .+++.+.+.+..++
T Consensus 45 ~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~~ 124 (290)
T PRK06701 45 KGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELGR 124 (290)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 68899999999999999888777789999888776432 21 2233343321 3443321 11223333333347
Q ss_pred eeEEEeCCCc
Q psy14589 181 LDADHPGFTD 190 (655)
Q Consensus 181 vDvV~D~vG~ 190 (655)
+|+++.++|.
T Consensus 125 iD~lI~~Ag~ 134 (290)
T PRK06701 125 LDILVNNAAF 134 (290)
T ss_pred CCEEEECCcc
Confidence 8999988874
No 278
>PRK12367 short chain dehydrogenase; Provisional
Probab=96.49 E-value=0.0099 Score=61.27 Aligned_cols=74 Identities=14% Similarity=-0.022 Sum_probs=49.6
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh-HHHHHHHhCCCcEE--EeCCccchhHHHHHHHhcCCCeeEEEe
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCP-VGVAKAYGLGADYV--VDHTIRELDRFANQILSYGSELDADHP 186 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~-~k~~~a~~LGAd~v--Id~~~~~~~d~~~~i~~~~~gvDvV~D 186 (655)
.|++++|+||+||+|..+++.....|++|+++++++ ++.+... .+.... .|.++. +.+.+.-+++|+++.
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~-~~~~~~~~~D~~~~------~~~~~~~~~iDilVn 85 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESND-ESPNEWIKWECGKE------ESLDKQLASLDVLIL 85 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhc-cCCCeEEEeeCCCH------HHHHHhcCCCCEEEE
Confidence 578999999999999999988888899999998875 2222211 122222 344332 122233346999999
Q ss_pred CCCc
Q psy14589 187 GFTD 190 (655)
Q Consensus 187 ~vG~ 190 (655)
++|.
T Consensus 86 nAG~ 89 (245)
T PRK12367 86 NHGI 89 (245)
T ss_pred CCcc
Confidence 9985
No 279
>PRK07904 short chain dehydrogenase; Provisional
Probab=96.49 E-value=0.013 Score=60.44 Aligned_cols=82 Identities=16% Similarity=0.107 Sum_probs=52.4
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecChHH-HHH----HHhCCCc--EE--EeCCccc-hhHHHHHHHhc
Q psy14589 109 PEPDTLFIIGANRGNGLAAIQVGKAY-GLTVFASVGCPVG-VAK----AYGLGAD--YV--VDHTIRE-LDRFANQILSY 177 (655)
Q Consensus 109 ~~Gd~VLI~GasGgVG~~avQlAk~~-Ga~Viat~~s~~k-~~~----a~~LGAd--~v--Id~~~~~-~~d~~~~i~~~ 177 (655)
..+.+|+|+||+||+|...++-.... |++|+++++++++ ++. +++.|.. ++ .|..+.. ..++.+.+.+.
T Consensus 6 ~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 85 (253)
T PRK07904 6 GNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAG 85 (253)
T ss_pred CCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhc
Confidence 56789999999999999998765556 5899999988765 332 3344432 22 3444321 01223333332
Q ss_pred CCCeeEEEeCCCcc
Q psy14589 178 GSELDADHPGFTDP 191 (655)
Q Consensus 178 ~~gvDvV~D~vG~~ 191 (655)
+++|+++.+.|..
T Consensus 86 -g~id~li~~ag~~ 98 (253)
T PRK07904 86 -GDVDVAIVAFGLL 98 (253)
T ss_pred -CCCCEEEEeeecC
Confidence 4799988877654
No 280
>PRK06125 short chain dehydrogenase; Provisional
Probab=96.49 E-value=0.019 Score=58.80 Aligned_cols=78 Identities=18% Similarity=0.150 Sum_probs=53.7
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----h-CCCc-EE--EeCCccchhHHHHHHHhcCCCe
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----G-LGAD-YV--VDHTIRELDRFANQILSYGSEL 181 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~-LGAd-~v--Id~~~~~~~d~~~~i~~~~~gv 181 (655)
+|.+++|+|++|++|..+++.....|++|+++++++++.+.+. + .|.. .+ .|..+. +++.+.+.+ .+.+
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~--~~~~~~~~~-~g~i 82 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSP--EAREQLAAE-AGDI 82 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCH--HHHHHHHHH-hCCC
Confidence 5789999999999999999888888999999999887665532 1 2322 12 233332 233333333 2478
Q ss_pred eEEEeCCCc
Q psy14589 182 DADHPGFTD 190 (655)
Q Consensus 182 DvV~D~vG~ 190 (655)
|+++.+.|.
T Consensus 83 d~lv~~ag~ 91 (259)
T PRK06125 83 DILVNNAGA 91 (259)
T ss_pred CEEEECCCC
Confidence 999998875
No 281
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=96.49 E-value=0.013 Score=56.96 Aligned_cols=90 Identities=11% Similarity=-0.007 Sum_probs=61.2
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCC
Q psy14589 109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGF 188 (655)
Q Consensus 109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~v 188 (655)
-.|++++|.|= |-+|.-.++.+|.+|++|++++.+|-+.-.|..-|... . .+.+.+. ..|+++.++
T Consensus 21 l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~dGf~v-~--------~~~~a~~----~adi~vtaT 86 (162)
T PF00670_consen 21 LAGKRVVVIGY-GKVGKGIARALRGLGARVTVTEIDPIRALQAAMDGFEV-M--------TLEEALR----DADIFVTAT 86 (162)
T ss_dssp -TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHHTT-EE-E---------HHHHTT----T-SEEEE-S
T ss_pred eCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEECChHHHHHhhhcCcEe-c--------CHHHHHh----hCCEEEECC
Confidence 48999999999 99999999999999999999999998877777677642 2 1222222 469999999
Q ss_pred CcchHHHHHHHHHHhccccceEEEe
Q psy14589 189 TDPVYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 189 G~~~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
|... -.-.+-++.|++|.-+..+|
T Consensus 87 G~~~-vi~~e~~~~mkdgail~n~G 110 (162)
T PF00670_consen 87 GNKD-VITGEHFRQMKDGAILANAG 110 (162)
T ss_dssp SSSS-SB-HHHHHHS-TTEEEEESS
T ss_pred CCcc-ccCHHHHHHhcCCeEEeccC
Confidence 9872 00357788999877666665
No 282
>PRK05867 short chain dehydrogenase; Provisional
Probab=96.49 E-value=0.011 Score=60.36 Aligned_cols=81 Identities=15% Similarity=0.071 Sum_probs=55.1
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hCCCcE---EEeCCccc-hhHHHHHHHhcCCCe
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GLGADY---VVDHTIRE-LDRFANQILSYGSEL 181 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~LGAd~---vId~~~~~-~~d~~~~i~~~~~gv 181 (655)
.|++++|+|++||||..+++.....|++|+++++++++.+.+. ..|... ..|..+.. .+++.+.+.+..+++
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 87 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGI 87 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 6889999999999999999888888999999999887765542 234321 13444321 112233333333479
Q ss_pred eEEEeCCCc
Q psy14589 182 DADHPGFTD 190 (655)
Q Consensus 182 DvV~D~vG~ 190 (655)
|+++.+.|.
T Consensus 88 d~lv~~ag~ 96 (253)
T PRK05867 88 DIAVCNAGI 96 (253)
T ss_pred CEEEECCCC
Confidence 999998875
No 283
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=96.48 E-value=0.012 Score=57.96 Aligned_cols=91 Identities=21% Similarity=0.180 Sum_probs=61.3
Q ss_pred EEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhC---CCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCCC
Q psy14589 113 TLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGL---GADYVVDHTIRELDRFANQILSYGSELDADHPGFT 189 (655)
Q Consensus 113 ~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~L---GAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG 189 (655)
+|.|+||||-+|...++=|+.+|-+|.+++|++.|....... -+| ++|.+ .+.+.+ .|+|+|+++.|
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~~~~i~q~D-ifd~~-----~~a~~l----~g~DaVIsA~~ 71 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAARQGVTILQKD-IFDLT-----SLASDL----AGHDAVISAFG 71 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhccccccceeeccc-ccChh-----hhHhhh----cCCceEEEecc
Confidence 688999999999999999999999999999999887543221 111 12211 111222 28999999998
Q ss_pred cc--hH-----HHHHHHHHHhcccc--ceEEEe
Q psy14589 190 DP--VY-----RARRKYFADLAFNY--KHFFFF 213 (655)
Q Consensus 190 ~~--~~-----~~l~~~l~~l~~gG--rlv~v~ 213 (655)
.. .. ...+..+..|+..| |+++||
T Consensus 72 ~~~~~~~~~~~k~~~~li~~l~~agv~RllVVG 104 (211)
T COG2910 72 AGASDNDELHSKSIEALIEALKGAGVPRLLVVG 104 (211)
T ss_pred CCCCChhHHHHHHHHHHHHHHhhcCCeeEEEEc
Confidence 76 10 11233556666534 788886
No 284
>PRK08264 short chain dehydrogenase; Validated
Probab=96.47 E-value=0.012 Score=59.23 Aligned_cols=77 Identities=23% Similarity=0.204 Sum_probs=52.5
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhCCCcEE-EeCCccchhHHHHHHHhcCCCeeEEEeC
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGLGADYV-VDHTIRELDRFANQILSYGSELDADHPG 187 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~LGAd~v-Id~~~~~~~d~~~~i~~~~~gvDvV~D~ 187 (655)
.+.+|+|+||+|++|..+++.+...|+ +|+++++++++.+. ....+..+ .|..+. +++.+.+.+ .+.+|+|+.+
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~-~~~~~~~~~~D~~~~--~~~~~~~~~-~~~id~vi~~ 80 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD-LGPRVVPLQLDVTDP--ASVAAAAEA-ASDVTILVNN 80 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh-cCCceEEEEecCCCH--HHHHHHHHh-cCCCCEEEEC
Confidence 578899999999999999998888999 99999988766543 11112111 244332 233333333 2368999999
Q ss_pred CCc
Q psy14589 188 FTD 190 (655)
Q Consensus 188 vG~ 190 (655)
+|.
T Consensus 81 ag~ 83 (238)
T PRK08264 81 AGI 83 (238)
T ss_pred CCc
Confidence 887
No 285
>PRK06172 short chain dehydrogenase; Provisional
Probab=96.47 E-value=0.017 Score=58.76 Aligned_cols=81 Identities=16% Similarity=0.115 Sum_probs=54.0
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcE-E--EeCCccc-hhHHHHHHHhcCCCe
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADY-V--VDHTIRE-LDRFANQILSYGSEL 181 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~-v--Id~~~~~-~~d~~~~i~~~~~gv 181 (655)
+|.+++|+||+|++|..+++.....|++|+++++++++.+.+ ++.|... + .|..+.. ..++.+.+.+..+++
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i 85 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRL 85 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 578999999999999999887777899999999987765433 3344321 2 3433321 112233333333478
Q ss_pred eEEEeCCCc
Q psy14589 182 DADHPGFTD 190 (655)
Q Consensus 182 DvV~D~vG~ 190 (655)
|+++.+.|.
T Consensus 86 d~li~~ag~ 94 (253)
T PRK06172 86 DYAFNNAGI 94 (253)
T ss_pred CEEEECCCC
Confidence 999998875
No 286
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=96.45 E-value=0.018 Score=58.95 Aligned_cols=79 Identities=20% Similarity=0.176 Sum_probs=54.8
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hCCCc---EEEeCCccchhHHH---HHHHhcCC
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GLGAD---YVVDHTIRELDRFA---NQILSYGS 179 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~LGAd---~vId~~~~~~~d~~---~~i~~~~~ 179 (655)
+|.+++|+||+|+||..+++.....|++|+.++++.++.+.+. ..+.. ...|..+. +++. +.+.+..+
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~--~~i~~~~~~~~~~~~ 88 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADE--ADIERLAEETLERFG 88 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCH--HHHHHHHHHHHHHhC
Confidence 6889999999999999999888788999999999887765543 33332 12344432 2232 33333334
Q ss_pred CeeEEEeCCCc
Q psy14589 180 ELDADHPGFTD 190 (655)
Q Consensus 180 gvDvV~D~vG~ 190 (655)
++|+++-++|.
T Consensus 89 ~id~vi~~ag~ 99 (259)
T PRK08213 89 HVDILVNNAGA 99 (259)
T ss_pred CCCEEEECCCC
Confidence 78999998874
No 287
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=96.44 E-value=0.0098 Score=60.98 Aligned_cols=94 Identities=15% Similarity=0.112 Sum_probs=68.4
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh----CCCcEEEeCCccchhHHHHHHHhcCCCeeEEE
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG----LGADYVVDHTIRELDRFANQILSYGSELDADH 185 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~----LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~ 185 (655)
+|.+||=.|++|| +++.-+|+ +|++|+++|.+++..+.++. -|.. |||... ..+.+.+.++.+|+|+
T Consensus 59 ~g~~vLDvGCGgG--~Lse~mAr-~Ga~VtgiD~se~~I~~Ak~ha~e~gv~--i~y~~~----~~edl~~~~~~FDvV~ 129 (243)
T COG2227 59 PGLRVLDVGCGGG--ILSEPLAR-LGASVTGIDASEKPIEVAKLHALESGVN--IDYRQA----TVEDLASAGGQFDVVT 129 (243)
T ss_pred CCCeEEEecCCcc--HhhHHHHH-CCCeeEEecCChHHHHHHHHhhhhcccc--ccchhh----hHHHHHhcCCCccEEE
Confidence 7889998899555 57777776 58999999999998888763 3443 678763 3455555556899985
Q ss_pred -----eCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589 186 -----PGFTDPVYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 186 -----D~vG~~~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
+-+..+. .-+..|.+++||||.+++--
T Consensus 130 cmEVlEHv~dp~-~~~~~c~~lvkP~G~lf~ST 161 (243)
T COG2227 130 CMEVLEHVPDPE-SFLRACAKLVKPGGILFLST 161 (243)
T ss_pred EhhHHHccCCHH-HHHHHHHHHcCCCcEEEEec
Confidence 4555551 12688999999999988764
No 288
>PRK06953 short chain dehydrogenase; Provisional
Probab=96.44 E-value=0.018 Score=57.65 Aligned_cols=77 Identities=26% Similarity=0.252 Sum_probs=55.0
Q ss_pred CEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcE-EEeCCccchhHHHHHHHhcC-CCeeEEEeCCC
Q psy14589 112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADY-VVDHTIRELDRFANQILSYG-SELDADHPGFT 189 (655)
Q Consensus 112 d~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~-vId~~~~~~~d~~~~i~~~~-~gvDvV~D~vG 189 (655)
++++|+|++|+||..+++.....|++|+++++++++.+.++..++.. ..|..+. +++.+.+.+.. .++|+++.+.|
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~--~~v~~~~~~~~~~~~d~vi~~ag 79 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQALGAEALALDVADP--ASVAGLAWKLDGEALDAAVYVAG 79 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHhccceEEEecCCCH--HHHHHHHHHhcCCCCCEEEECCC
Confidence 47999999999999999877678999999999988877777666542 2344432 23333333332 26899998887
Q ss_pred c
Q psy14589 190 D 190 (655)
Q Consensus 190 ~ 190 (655)
.
T Consensus 80 ~ 80 (222)
T PRK06953 80 V 80 (222)
T ss_pred c
Confidence 5
No 289
>PRK07035 short chain dehydrogenase; Provisional
Probab=96.43 E-value=0.013 Score=59.67 Aligned_cols=81 Identities=20% Similarity=0.142 Sum_probs=54.2
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hCCCc-EE--EeCCccc-hhHHHHHHHhcCCCe
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GLGAD-YV--VDHTIRE-LDRFANQILSYGSEL 181 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~LGAd-~v--Id~~~~~-~~d~~~~i~~~~~gv 181 (655)
.+.+|+|+||+|+||..+++.....|++|+.+++++++.+.+. +.|.. .. .|..+.. .+.+.+.+.+..+.+
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 86 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRL 86 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999999999999988888999999998876655432 23432 11 2444321 112233333333478
Q ss_pred eEEEeCCCc
Q psy14589 182 DADHPGFTD 190 (655)
Q Consensus 182 DvV~D~vG~ 190 (655)
|+++.+.|.
T Consensus 87 d~li~~ag~ 95 (252)
T PRK07035 87 DILVNNAAA 95 (252)
T ss_pred CEEEECCCc
Confidence 999988874
No 290
>PLN02253 xanthoxin dehydrogenase
Probab=96.43 E-value=0.016 Score=60.18 Aligned_cols=81 Identities=15% Similarity=0.064 Sum_probs=53.2
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH-HhCCC--c-EE--EeCCccc-hhHHHHHHHhcCCCee
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA-YGLGA--D-YV--VDHTIRE-LDRFANQILSYGSELD 182 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a-~~LGA--d-~v--Id~~~~~-~~d~~~~i~~~~~gvD 182 (655)
.|.+++|+||+|+||..+++.....|++|+++++++++.+.+ .+++. . .. .|..+.. .+++.+.+.+..+++|
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id 96 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLD 96 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence 578999999999999998887777899999998877655443 23322 1 11 3444421 1122233333334799
Q ss_pred EEEeCCCc
Q psy14589 183 ADHPGFTD 190 (655)
Q Consensus 183 vV~D~vG~ 190 (655)
+++.++|.
T Consensus 97 ~li~~Ag~ 104 (280)
T PLN02253 97 IMVNNAGL 104 (280)
T ss_pred EEEECCCc
Confidence 99998874
No 291
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.42 E-value=0.016 Score=59.81 Aligned_cols=81 Identities=19% Similarity=0.201 Sum_probs=51.8
Q ss_pred CCCEEEEEcCCC--chHHHHHHHHHHcCCeEEEEecChH---HHHHH-HhCCCcEE--EeCCccc-hhHHHHHHHhcCCC
Q psy14589 110 EPDTLFIIGANR--GNGLAAIQVGKAYGLTVFASVGCPV---GVAKA-YGLGADYV--VDHTIRE-LDRFANQILSYGSE 180 (655)
Q Consensus 110 ~Gd~VLI~GasG--gVG~~avQlAk~~Ga~Viat~~s~~---k~~~a-~~LGAd~v--Id~~~~~-~~d~~~~i~~~~~g 180 (655)
.|++++|+||++ |||.++++.....|++|+.++++++ +.+.+ .+.|...+ .|-.+.. .+.+.+.+.+..++
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 86 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGS 86 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 688999999987 8999988777778999988877642 22222 23354332 3554431 12233333333347
Q ss_pred eeEEEeCCCc
Q psy14589 181 LDADHPGFTD 190 (655)
Q Consensus 181 vDvV~D~vG~ 190 (655)
+|+++.++|.
T Consensus 87 iDilVnnag~ 96 (260)
T PRK06603 87 FDFLLHGMAF 96 (260)
T ss_pred ccEEEEcccc
Confidence 9999988764
No 292
>PRK05717 oxidoreductase; Validated
Probab=96.42 E-value=0.018 Score=58.83 Aligned_cols=79 Identities=22% Similarity=0.117 Sum_probs=53.7
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH-HhCCCcE---EEeCCccchhHH---HHHHHhcCCCee
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA-YGLGADY---VVDHTIRELDRF---ANQILSYGSELD 182 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a-~~LGAd~---vId~~~~~~~d~---~~~i~~~~~gvD 182 (655)
+|.+|+|+|++|+||..+++.....|++|+.+++++++.+.+ ++++... ..|..+. ++. .+.+.+..+++|
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~--~~~~~~~~~~~~~~g~id 86 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADE--AQVAAGVAEVLGQFGRLD 86 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCH--HHHHHHHHHHHHHhCCCC
Confidence 788999999999999988887777899999998877655443 4455321 2344432 123 233333234689
Q ss_pred EEEeCCCc
Q psy14589 183 ADHPGFTD 190 (655)
Q Consensus 183 vV~D~vG~ 190 (655)
+++.+.|.
T Consensus 87 ~li~~ag~ 94 (255)
T PRK05717 87 ALVCNAAI 94 (255)
T ss_pred EEEECCCc
Confidence 99998874
No 293
>PRK07856 short chain dehydrogenase; Provisional
Probab=96.41 E-value=0.013 Score=59.90 Aligned_cols=79 Identities=18% Similarity=0.173 Sum_probs=51.6
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcE-EEeCCccc-hhHHHHHHHhcCCCeeEEEeC
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADY-VVDHTIRE-LDRFANQILSYGSELDADHPG 187 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~-vId~~~~~-~~d~~~~i~~~~~gvDvV~D~ 187 (655)
.|++++|+||+|+||..+++.....|++|+.+++++++. .....+.. ..|..+.. ..++.+.+.+..+++|+++.+
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ 82 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPET--VDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVLVNN 82 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhhh--hcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 688999999999999999988888899999999876541 11112211 13444321 112233333333478999998
Q ss_pred CCc
Q psy14589 188 FTD 190 (655)
Q Consensus 188 vG~ 190 (655)
+|.
T Consensus 83 ag~ 85 (252)
T PRK07856 83 AGG 85 (252)
T ss_pred CCC
Confidence 874
No 294
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=96.40 E-value=0.022 Score=58.18 Aligned_cols=81 Identities=14% Similarity=0.080 Sum_probs=54.0
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcE-E--EeCCccc-hhHHHHHHHhcCCCe
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADY-V--VDHTIRE-LDRFANQILSYGSEL 181 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~-v--Id~~~~~-~~d~~~~i~~~~~gv 181 (655)
.|.+++|+||+|+||..+++.....|++|+.+++++++.+.+ +..|... . .|..+.. ..++.+.+.+..+++
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 87 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPI 87 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence 678999999999999999987777899999999987765443 2234322 1 2333321 112233333333479
Q ss_pred eEEEeCCCc
Q psy14589 182 DADHPGFTD 190 (655)
Q Consensus 182 DvV~D~vG~ 190 (655)
|+++.+.|.
T Consensus 88 d~vi~~ag~ 96 (254)
T PRK08085 88 DVLINNAGI 96 (254)
T ss_pred CEEEECCCc
Confidence 999999874
No 295
>PRK06484 short chain dehydrogenase; Validated
Probab=96.40 E-value=0.016 Score=65.89 Aligned_cols=82 Identities=18% Similarity=0.076 Sum_probs=57.9
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH-HhCCCcE---EEeCCccc-hhHHHHHHHhcCCCeeE
Q psy14589 109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA-YGLGADY---VVDHTIRE-LDRFANQILSYGSELDA 183 (655)
Q Consensus 109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a-~~LGAd~---vId~~~~~-~~d~~~~i~~~~~gvDv 183 (655)
..|++++|+|+++|||...++.....|++|+.++++.++.+.+ +++|... .+|.++.. ...+.+.+.+..+++|+
T Consensus 3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~ 82 (520)
T PRK06484 3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDV 82 (520)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence 3688999999999999999998888899999999988876554 4566432 24544431 11233333333357999
Q ss_pred EEeCCCc
Q psy14589 184 DHPGFTD 190 (655)
Q Consensus 184 V~D~vG~ 190 (655)
++.+.|.
T Consensus 83 li~nag~ 89 (520)
T PRK06484 83 LVNNAGV 89 (520)
T ss_pred EEECCCc
Confidence 9998874
No 296
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=96.40 E-value=0.011 Score=58.15 Aligned_cols=89 Identities=18% Similarity=0.156 Sum_probs=59.1
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCCC
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGFT 189 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG 189 (655)
.|.+|.|.|. |.||..+++.++.+|++|++.+++.+........|... . ++.+.+. ..|+|+-++.
T Consensus 35 ~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~~~~~~----~-----~l~ell~----~aDiv~~~~p 100 (178)
T PF02826_consen 35 RGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEEGADEFGVEY----V-----SLDELLA----QADIVSLHLP 100 (178)
T ss_dssp TTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHHTTEEE----S-----SHHHHHH----H-SEEEE-SS
T ss_pred CCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhhhccccccee----e-----ehhhhcc----hhhhhhhhhc
Confidence 7999999999 99999999999999999999999877665455665421 1 2233333 2577777665
Q ss_pred cc--hHHH-HHHHHHHhccccceEEE
Q psy14589 190 DP--VYRA-RRKYFADLAFNYKHFFF 212 (655)
Q Consensus 190 ~~--~~~~-l~~~l~~l~~gGrlv~v 212 (655)
.. +... -.+.++.+++|..+|-+
T Consensus 101 lt~~T~~li~~~~l~~mk~ga~lvN~ 126 (178)
T PF02826_consen 101 LTPETRGLINAEFLAKMKPGAVLVNV 126 (178)
T ss_dssp SSTTTTTSBSHHHHHTSTTTEEEEES
T ss_pred cccccceeeeeeeeeccccceEEEec
Confidence 32 1000 25667788877765554
No 297
>PRK08226 short chain dehydrogenase; Provisional
Probab=96.40 E-value=0.016 Score=59.28 Aligned_cols=81 Identities=19% Similarity=0.045 Sum_probs=52.9
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH---hCCCcE---EEeCCccc-hhHHHHHHHhcCCCee
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY---GLGADY---VVDHTIRE-LDRFANQILSYGSELD 182 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~---~LGAd~---vId~~~~~-~~d~~~~i~~~~~gvD 182 (655)
++.+++|+|++|+||..+++.....|++|+.++++++..+.+. +.|... ..|..+.. .+.+.+.+.+..+++|
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id 84 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRID 84 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 5789999999999999999888788999999988765433332 234321 13444321 1122333333334789
Q ss_pred EEEeCCCc
Q psy14589 183 ADHPGFTD 190 (655)
Q Consensus 183 vV~D~vG~ 190 (655)
+++.++|.
T Consensus 85 ~vi~~ag~ 92 (263)
T PRK08226 85 ILVNNAGV 92 (263)
T ss_pred EEEECCCc
Confidence 99998874
No 298
>PRK06114 short chain dehydrogenase; Provisional
Probab=96.39 E-value=0.019 Score=58.77 Aligned_cols=81 Identities=16% Similarity=-0.002 Sum_probs=52.6
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHH-HH----HHHhCCCcE-E--EeCCccc-hhHHHHHHHhcCCC
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVG-VA----KAYGLGADY-V--VDHTIRE-LDRFANQILSYGSE 180 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k-~~----~a~~LGAd~-v--Id~~~~~-~~d~~~~i~~~~~g 180 (655)
.|.+++|+|++||||..+++.....|++|+++++++++ .+ .+++.|... . .|..+.. ..++.+.+.+..++
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 86 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGA 86 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 67899999999999999999888899999999876532 22 223344321 1 2443321 11223333333357
Q ss_pred eeEEEeCCCc
Q psy14589 181 LDADHPGFTD 190 (655)
Q Consensus 181 vDvV~D~vG~ 190 (655)
+|+++.+.|.
T Consensus 87 id~li~~ag~ 96 (254)
T PRK06114 87 LTLAVNAAGI 96 (254)
T ss_pred CCEEEECCCC
Confidence 8999999885
No 299
>PRK06181 short chain dehydrogenase; Provisional
Probab=96.37 E-value=0.021 Score=58.53 Aligned_cols=79 Identities=14% Similarity=0.053 Sum_probs=53.4
Q ss_pred CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcEE---EeCCccchhHHHHH---HHhcCCC
Q psy14589 111 PDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADYV---VDHTIRELDRFANQ---ILSYGSE 180 (655)
Q Consensus 111 Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~v---Id~~~~~~~d~~~~---i~~~~~g 180 (655)
+.+|+|+||+|++|..+++.+...|++|+++++++++.+.+ +..|.... .|..+. +++.+. +.+..++
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~--~~~~~~~~~~~~~~~~ 78 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDA--EACERLIEAAVARFGG 78 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCH--HHHHHHHHHHHHHcCC
Confidence 45799999999999999998888899999999987665433 23444221 243332 223322 2222347
Q ss_pred eeEEEeCCCcc
Q psy14589 181 LDADHPGFTDP 191 (655)
Q Consensus 181 vDvV~D~vG~~ 191 (655)
+|+|+.++|..
T Consensus 79 id~vi~~ag~~ 89 (263)
T PRK06181 79 IDILVNNAGIT 89 (263)
T ss_pred CCEEEECCCcc
Confidence 89999998753
No 300
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.37 E-value=0.022 Score=58.30 Aligned_cols=81 Identities=15% Similarity=0.044 Sum_probs=52.6
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh-HHHHHHHhCCCcEE-EeCCccc-hhHHHHHHHhcCCCeeEEEe
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCP-VGVAKAYGLGADYV-VDHTIRE-LDRFANQILSYGSELDADHP 186 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~-~k~~~a~~LGAd~v-Id~~~~~-~~d~~~~i~~~~~gvDvV~D 186 (655)
.|.+++|+||+|+||...++.....|++|+++.++. ++.+.+++.+...+ .|..+.. ..++.+.+.+..+++|+++.
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~ 85 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLVN 85 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 578999999999999999988777899998775543 34444444444322 3444431 11223333333347999999
Q ss_pred CCCc
Q psy14589 187 GFTD 190 (655)
Q Consensus 187 ~vG~ 190 (655)
++|.
T Consensus 86 ~ag~ 89 (255)
T PRK06463 86 NAGI 89 (255)
T ss_pred CCCc
Confidence 8875
No 301
>PRK09072 short chain dehydrogenase; Provisional
Probab=96.37 E-value=0.019 Score=59.06 Aligned_cols=80 Identities=13% Similarity=0.031 Sum_probs=53.6
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh-C--CC-cEE--EeCCccc-hhHHHHHHHhcCCCee
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG-L--GA-DYV--VDHTIRE-LDRFANQILSYGSELD 182 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~-L--GA-d~v--Id~~~~~-~~d~~~~i~~~~~gvD 182 (655)
+|.+++|+||+|++|..+++.....|++|+++++++++.+.+.+ + +. ... .|..+.. ..++.+.+.+ .+++|
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~-~~~id 82 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARARE-MGGIN 82 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHh-cCCCC
Confidence 57889999999999999998888889999999998877655532 2 21 112 2333321 0122223333 24789
Q ss_pred EEEeCCCc
Q psy14589 183 ADHPGFTD 190 (655)
Q Consensus 183 vV~D~vG~ 190 (655)
+++.++|.
T Consensus 83 ~lv~~ag~ 90 (263)
T PRK09072 83 VLINNAGV 90 (263)
T ss_pred EEEECCCC
Confidence 99999875
No 302
>PRK05884 short chain dehydrogenase; Provisional
Probab=96.36 E-value=0.019 Score=57.91 Aligned_cols=75 Identities=15% Similarity=0.046 Sum_probs=52.9
Q ss_pred EEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH-HhCCCcEE-EeCCccchhHHHHHHHhcCCCeeEEEeCCC
Q psy14589 113 TLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA-YGLGADYV-VDHTIRELDRFANQILSYGSELDADHPGFT 189 (655)
Q Consensus 113 ~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a-~~LGAd~v-Id~~~~~~~d~~~~i~~~~~gvDvV~D~vG 189 (655)
+++|+||+|++|..+++.....|++|+.+++++++.+.+ +++++..+ .|..+. +++.+.+.+..+.+|+++.+.|
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~--~~v~~~~~~~~~~id~lv~~ag 78 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDP--ASLEEARGLFPHHLDTIVNVPA 78 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCH--HHHHHHHHHHhhcCcEEEECCC
Confidence 589999999999999988878899999999988877654 44555433 344432 2344434333336899998876
No 303
>PRK06179 short chain dehydrogenase; Provisional
Probab=96.36 E-value=0.01 Score=61.15 Aligned_cols=77 Identities=18% Similarity=0.237 Sum_probs=52.8
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEE-EeCCccchhHHHH---HHHhcCCCeeEEE
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYV-VDHTIRELDRFAN---QILSYGSELDADH 185 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~v-Id~~~~~~~d~~~---~i~~~~~gvDvV~ 185 (655)
.+.+|+|+||+|+||..+++.....|++|+++++++++.+.. .+...+ .|..+. +++.+ .+.+..+.+|+++
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~--~~~~~~~~D~~d~--~~~~~~~~~~~~~~g~~d~li 78 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPI--PGVELLELDVTDD--ASVQAAVDEVIARAGRIDVLV 78 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccc--CCCeeEEeecCCH--HHHHHHHHHHHHhCCCCCEEE
Confidence 467899999999999999888778899999999886654322 233222 354443 23333 3333344799999
Q ss_pred eCCCc
Q psy14589 186 PGFTD 190 (655)
Q Consensus 186 D~vG~ 190 (655)
.+.|.
T Consensus 79 ~~ag~ 83 (270)
T PRK06179 79 NNAGV 83 (270)
T ss_pred ECCCC
Confidence 99985
No 304
>PRK08628 short chain dehydrogenase; Provisional
Probab=96.36 E-value=0.019 Score=58.60 Aligned_cols=79 Identities=15% Similarity=-0.005 Sum_probs=53.4
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH---hCCCcE---EEeCCccchhHHHH---HHHhcCCC
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY---GLGADY---VVDHTIRELDRFAN---QILSYGSE 180 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~---~LGAd~---vId~~~~~~~d~~~---~i~~~~~g 180 (655)
+|.+++|+||+|++|..+++.....|++|+++++++++.+... +.|... ..|.++. +++.+ .+.+..++
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~ 83 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDD--AQCRDAVEQTVAKFGR 83 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCH--HHHHHHHHHHHHhcCC
Confidence 6889999999999999988877778999999988887653333 334321 1344332 22332 23222347
Q ss_pred eeEEEeCCCc
Q psy14589 181 LDADHPGFTD 190 (655)
Q Consensus 181 vDvV~D~vG~ 190 (655)
+|+++.++|.
T Consensus 84 id~vi~~ag~ 93 (258)
T PRK08628 84 IDGLVNNAGV 93 (258)
T ss_pred CCEEEECCcc
Confidence 9999999984
No 305
>PRK08643 acetoin reductase; Validated
Probab=96.35 E-value=0.013 Score=59.74 Aligned_cols=80 Identities=16% Similarity=0.082 Sum_probs=53.3
Q ss_pred CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hCCCcEE---EeCCccc-hhHHHHHHHhcCCCee
Q psy14589 111 PDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GLGADYV---VDHTIRE-LDRFANQILSYGSELD 182 (655)
Q Consensus 111 Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~LGAd~v---Id~~~~~-~~d~~~~i~~~~~gvD 182 (655)
|++++|+|++|+||..+++.....|++|+++++++++.+.+. +.|.... .|.++.. ..+..+.+.+..+++|
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 81 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN 81 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 578999999999999999888888999999998876654432 2343221 2444321 0122333333335799
Q ss_pred EEEeCCCc
Q psy14589 183 ADHPGFTD 190 (655)
Q Consensus 183 vV~D~vG~ 190 (655)
+++.+.|.
T Consensus 82 ~vi~~ag~ 89 (256)
T PRK08643 82 VVVNNAGV 89 (256)
T ss_pred EEEECCCC
Confidence 99998875
No 306
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=96.35 E-value=0.023 Score=57.72 Aligned_cols=81 Identities=17% Similarity=0.046 Sum_probs=53.8
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hCCCcE---EEeCCccc-hhHHHHHHHhcCCCe
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GLGADY---VVDHTIRE-LDRFANQILSYGSEL 181 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~LGAd~---vId~~~~~-~~d~~~~i~~~~~gv 181 (655)
+|.+|+|+|++|++|...++.....|++|+++++++++.+.+. +.+... ..|..+.. .....+.+.+..+++
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 82 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGV 82 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999999999999877778999999999887665432 234321 13444321 011223333333478
Q ss_pred eEEEeCCCc
Q psy14589 182 DADHPGFTD 190 (655)
Q Consensus 182 DvV~D~vG~ 190 (655)
|+++.++|.
T Consensus 83 d~vi~~a~~ 91 (258)
T PRK12429 83 DILVNNAGI 91 (258)
T ss_pred CEEEECCCC
Confidence 999998874
No 307
>PRK08263 short chain dehydrogenase; Provisional
Probab=96.35 E-value=0.019 Score=59.58 Aligned_cols=81 Identities=22% Similarity=0.129 Sum_probs=54.0
Q ss_pred CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh-CCCc-EE--EeCCccc-hhHHHHHHHhcCCCeeEEE
Q psy14589 111 PDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG-LGAD-YV--VDHTIRE-LDRFANQILSYGSELDADH 185 (655)
Q Consensus 111 Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~-LGAd-~v--Id~~~~~-~~d~~~~i~~~~~gvDvV~ 185 (655)
+.+|+|+||+|+||..+++.....|++|+++++++++.+.+.+ ++.. .+ .|.++.. ..+..+.+.+..+++|+++
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi 82 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVV 82 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 5689999999999999988877789999999998877765543 3321 11 3443321 1122233333334789999
Q ss_pred eCCCcc
Q psy14589 186 PGFTDP 191 (655)
Q Consensus 186 D~vG~~ 191 (655)
.++|..
T Consensus 83 ~~ag~~ 88 (275)
T PRK08263 83 NNAGYG 88 (275)
T ss_pred ECCCCc
Confidence 998853
No 308
>PRK08251 short chain dehydrogenase; Provisional
Probab=96.34 E-value=0.022 Score=57.80 Aligned_cols=78 Identities=17% Similarity=0.072 Sum_probs=52.2
Q ss_pred CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh----C--CCc-EE--EeCCccchhHHHH---HHHhcC
Q psy14589 111 PDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG----L--GAD-YV--VDHTIRELDRFAN---QILSYG 178 (655)
Q Consensus 111 Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~----L--GAd-~v--Id~~~~~~~d~~~---~i~~~~ 178 (655)
+.+++|+||+|++|...++.....|++|+++++++++.+.+.+ . |+. ++ .|.++. +++.+ .+.+..
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~ 79 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDH--DQVFEVFAEFRDEL 79 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCH--HHHHHHHHHHHHHc
Confidence 5689999999999998887666779999999998877655422 1 221 11 354443 23333 333333
Q ss_pred CCeeEEEeCCCc
Q psy14589 179 SELDADHPGFTD 190 (655)
Q Consensus 179 ~gvDvV~D~vG~ 190 (655)
+++|+++.+.|.
T Consensus 80 ~~id~vi~~ag~ 91 (248)
T PRK08251 80 GGLDRVIVNAGI 91 (248)
T ss_pred CCCCEEEECCCc
Confidence 479999998873
No 309
>PRK06138 short chain dehydrogenase; Provisional
Probab=96.33 E-value=0.015 Score=58.87 Aligned_cols=81 Identities=15% Similarity=0.108 Sum_probs=53.0
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh---CCCc-EE--EeCCccc-hhHHHHHHHhcCCCee
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG---LGAD-YV--VDHTIRE-LDRFANQILSYGSELD 182 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~---LGAd-~v--Id~~~~~-~~d~~~~i~~~~~gvD 182 (655)
+|.+++|+||+|+||..+++.....|++|+++++++++.+...+ .|.. .+ .|..+.. ..+..+.+.+..+++|
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id 83 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLD 83 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 57899999999999999988776789999999988766544322 2322 22 2433321 0122233333334799
Q ss_pred EEEeCCCc
Q psy14589 183 ADHPGFTD 190 (655)
Q Consensus 183 vV~D~vG~ 190 (655)
+++.++|.
T Consensus 84 ~vi~~ag~ 91 (252)
T PRK06138 84 VLVNNAGF 91 (252)
T ss_pred EEEECCCC
Confidence 99999885
No 310
>PRK07454 short chain dehydrogenase; Provisional
Probab=96.32 E-value=0.026 Score=57.03 Aligned_cols=80 Identities=15% Similarity=0.045 Sum_probs=54.7
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hCCCcE-E--EeCCccchhHHH---HHHHhcC
Q psy14589 109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GLGADY-V--VDHTIRELDRFA---NQILSYG 178 (655)
Q Consensus 109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~LGAd~-v--Id~~~~~~~d~~---~~i~~~~ 178 (655)
..+.+++|+|++|++|..++..+...|++|+++++++++.+.+. +.+... + .|.++. +++. +.+.+..
T Consensus 4 ~~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~ 81 (241)
T PRK07454 4 NSMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNP--EAIAPGIAELLEQF 81 (241)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCH--HHHHHHHHHHHHHc
Confidence 45678999999999999999888888999999999887655442 233221 1 343332 2332 2333333
Q ss_pred CCeeEEEeCCCc
Q psy14589 179 SELDADHPGFTD 190 (655)
Q Consensus 179 ~gvDvV~D~vG~ 190 (655)
+++|+++.++|.
T Consensus 82 ~~id~lv~~ag~ 93 (241)
T PRK07454 82 GCPDVLINNAGM 93 (241)
T ss_pred CCCCEEEECCCc
Confidence 479999999985
No 311
>KOG0725|consensus
Probab=96.32 E-value=0.022 Score=59.93 Aligned_cols=82 Identities=15% Similarity=0.128 Sum_probs=57.5
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hCCCc------EEEeCCccc-hhHHHHHHHhc-
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GLGAD------YVVDHTIRE-LDRFANQILSY- 177 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~LGAd------~vId~~~~~-~~d~~~~i~~~- 177 (655)
.|..++|+|++.|||.+++......|++|+.+++++++.+... ..|.+ .+.|.++.+ .+++.+...+.
T Consensus 7 ~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~~ 86 (270)
T KOG0725|consen 7 AGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEKF 86 (270)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHHh
Confidence 7899999999999999888888888999999999988765543 33332 233444321 12333333333
Q ss_pred CCCeeEEEeCCCcc
Q psy14589 178 GSELDADHPGFTDP 191 (655)
Q Consensus 178 ~~gvDvV~D~vG~~ 191 (655)
.+++|+.++..|..
T Consensus 87 ~GkidiLvnnag~~ 100 (270)
T KOG0725|consen 87 FGKIDILVNNAGAL 100 (270)
T ss_pred CCCCCEEEEcCCcC
Confidence 45799999888765
No 312
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.31 E-value=0.064 Score=54.32 Aligned_cols=81 Identities=16% Similarity=0.068 Sum_probs=50.2
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecC-hHHH----HHHHhCCCcE-E--EeCCccc-hhHHHHHHHhcCCC
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGC-PVGV----AKAYGLGADY-V--VDHTIRE-LDRFANQILSYGSE 180 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s-~~k~----~~a~~LGAd~-v--Id~~~~~-~~d~~~~i~~~~~g 180 (655)
.+.+|+|+||+|+||...++-....|++|+.+.++ .++. +.+++.|... . .|.++.. .....+.+.+..++
T Consensus 5 ~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (252)
T PRK06077 5 KDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYGV 84 (252)
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCC
Confidence 46899999999999998888777889998776643 2222 2234444432 2 3444321 11223333333347
Q ss_pred eeEEEeCCCc
Q psy14589 181 LDADHPGFTD 190 (655)
Q Consensus 181 vDvV~D~vG~ 190 (655)
+|+++.+.|.
T Consensus 85 ~d~vi~~ag~ 94 (252)
T PRK06077 85 ADILVNNAGL 94 (252)
T ss_pred CCEEEECCCC
Confidence 8999999984
No 313
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=96.31 E-value=0.021 Score=58.46 Aligned_cols=82 Identities=11% Similarity=0.057 Sum_probs=53.2
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChH--HHHHHHhCCCcE-E--EeCCccc-hhHHHHHHHhcCCCeeE
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPV--GVAKAYGLGADY-V--VDHTIRE-LDRFANQILSYGSELDA 183 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~--k~~~a~~LGAd~-v--Id~~~~~-~~d~~~~i~~~~~gvDv 183 (655)
.|.+++|+|++|+||..+++.....|++|+++++++. ..+.++++|... . .|-.+.. .+.+.+.+.+..+++|+
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D~ 88 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHIDI 88 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence 6889999999999999999988888999988766432 223344555321 1 2333321 12233344443457999
Q ss_pred EEeCCCcc
Q psy14589 184 DHPGFTDP 191 (655)
Q Consensus 184 V~D~vG~~ 191 (655)
++.++|..
T Consensus 89 li~~Ag~~ 96 (253)
T PRK08993 89 LVNNAGLI 96 (253)
T ss_pred EEECCCCC
Confidence 99998753
No 314
>PRK05875 short chain dehydrogenase; Provisional
Probab=96.29 E-value=0.022 Score=58.93 Aligned_cols=79 Identities=20% Similarity=0.123 Sum_probs=52.9
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-h---CC--Cc-EEE--eCCccchhHHHH---HHHhc
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-G---LG--AD-YVV--DHTIRELDRFAN---QILSY 177 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~---LG--Ad-~vI--d~~~~~~~d~~~---~i~~~ 177 (655)
++.+++|+|++|+||..+++.....|++|+++++++++.+... + .+ .. .++ |..+. +++.+ .+.+.
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~--~~~~~~~~~~~~~ 83 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDE--DQVARAVDAATAW 83 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCH--HHHHHHHHHHHHH
Confidence 5789999999999999999988889999999998876654332 2 21 11 222 43332 22322 23332
Q ss_pred CCCeeEEEeCCCc
Q psy14589 178 GSELDADHPGFTD 190 (655)
Q Consensus 178 ~~gvDvV~D~vG~ 190 (655)
.+++|+++.++|.
T Consensus 84 ~~~~d~li~~ag~ 96 (276)
T PRK05875 84 HGRLHGVVHCAGG 96 (276)
T ss_pred cCCCCEEEECCCc
Confidence 3478999998873
No 315
>PRK06482 short chain dehydrogenase; Provisional
Probab=96.29 E-value=0.021 Score=59.15 Aligned_cols=77 Identities=22% Similarity=0.181 Sum_probs=53.0
Q ss_pred CEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh-CCCc-E--EEeCCccchhHHHHHH---HhcCCCeeEE
Q psy14589 112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG-LGAD-Y--VVDHTIRELDRFANQI---LSYGSELDAD 184 (655)
Q Consensus 112 d~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~-LGAd-~--vId~~~~~~~d~~~~i---~~~~~gvDvV 184 (655)
.+|+|+||+|+||..+++-....|++|+++++++++.+.+++ .+.. . ..|.++. +++.+.+ .+..+++|++
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~id~v 80 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDS--AAVRAVVDRAFAALGRIDVV 80 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCH--HHHHHHHHHHHHHcCCCCEE
Confidence 579999999999999988777789999999998877766654 2321 1 1344432 1233322 2223478999
Q ss_pred EeCCCc
Q psy14589 185 HPGFTD 190 (655)
Q Consensus 185 ~D~vG~ 190 (655)
+.++|.
T Consensus 81 i~~ag~ 86 (276)
T PRK06482 81 VSNAGY 86 (276)
T ss_pred EECCCC
Confidence 999875
No 316
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=96.28 E-value=0.018 Score=58.55 Aligned_cols=82 Identities=17% Similarity=0.090 Sum_probs=54.1
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcE--E--EeCCccch---hHHHHHHHhc
Q psy14589 109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADY--V--VDHTIREL---DRFANQILSY 177 (655)
Q Consensus 109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~--v--Id~~~~~~---~d~~~~i~~~ 177 (655)
.+|.+|+|+|++|++|...++.....|++|++++++.++.+.+ ++.+... + .|...... .++.+.+.+.
T Consensus 10 ~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 89 (247)
T PRK08945 10 LKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEEQ 89 (247)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHHH
Confidence 4788999999999999999987777899999999987665443 3344322 1 23321111 1233334443
Q ss_pred CCCeeEEEeCCCc
Q psy14589 178 GSELDADHPGFTD 190 (655)
Q Consensus 178 ~~gvDvV~D~vG~ 190 (655)
.+++|+++-+.|.
T Consensus 90 ~~~id~vi~~Ag~ 102 (247)
T PRK08945 90 FGRLDGVLHNAGL 102 (247)
T ss_pred hCCCCEEEECCcc
Confidence 3478999988764
No 317
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=96.28 E-value=0.02 Score=58.72 Aligned_cols=78 Identities=18% Similarity=0.198 Sum_probs=51.9
Q ss_pred EEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hCCCcEE--EeCCccc-hhHHHHHHHhcCCCeeEEE
Q psy14589 113 TLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GLGADYV--VDHTIRE-LDRFANQILSYGSELDADH 185 (655)
Q Consensus 113 ~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~LGAd~v--Id~~~~~-~~d~~~~i~~~~~gvDvV~ 185 (655)
+|+|+|++||+|..+++.....|++|+.+++++++.+.+. +.|.... .|.++.. .+++.+.+.+..+++|+++
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li 81 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDALV 81 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 6999999999999988877778999999999887665442 2332222 3443321 1122333333334799999
Q ss_pred eCCCc
Q psy14589 186 PGFTD 190 (655)
Q Consensus 186 D~vG~ 190 (655)
.+.|.
T Consensus 82 ~naG~ 86 (259)
T PRK08340 82 WNAGN 86 (259)
T ss_pred ECCCC
Confidence 98874
No 318
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=96.27 E-value=0.021 Score=58.40 Aligned_cols=81 Identities=20% Similarity=0.157 Sum_probs=54.3
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hCCCc-EE--EeCCccc-hhHHHHHHHhcCCCeeEE
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GLGAD-YV--VDHTIRE-LDRFANQILSYGSELDAD 184 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~LGAd-~v--Id~~~~~-~~d~~~~i~~~~~gvDvV 184 (655)
.+.+++|+|++|++|..+++.....|++|+.++++.++.+.+. +++.. .. .|-.+.. ...+.+.+.+..+++|++
T Consensus 5 ~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 84 (257)
T PRK07067 5 QGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDIL 84 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 5779999999999999999888888999999999887766553 34321 11 2333321 112222333333478999
Q ss_pred EeCCCc
Q psy14589 185 HPGFTD 190 (655)
Q Consensus 185 ~D~vG~ 190 (655)
+.+.|.
T Consensus 85 i~~ag~ 90 (257)
T PRK07067 85 FNNAAL 90 (257)
T ss_pred EECCCc
Confidence 988874
No 319
>PRK06484 short chain dehydrogenase; Validated
Probab=96.25 E-value=0.021 Score=64.81 Aligned_cols=81 Identities=23% Similarity=0.135 Sum_probs=56.9
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh-CCCcE---EEeCCccc-hhHHHHHHHhcCCCeeEE
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG-LGADY---VVDHTIRE-LDRFANQILSYGSELDAD 184 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~-LGAd~---vId~~~~~-~~d~~~~i~~~~~gvDvV 184 (655)
.|++++|+||+||||...++.....|++|+++++++++.+.+.+ +|... ..|..+.. ...+.+.+.+..+.+|++
T Consensus 268 ~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 347 (520)
T PRK06484 268 SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDVL 347 (520)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 57899999999999999988877889999999998887766643 55432 23544431 112333333333579999
Q ss_pred EeCCCc
Q psy14589 185 HPGFTD 190 (655)
Q Consensus 185 ~D~vG~ 190 (655)
+.++|.
T Consensus 348 i~nAg~ 353 (520)
T PRK06484 348 VNNAGI 353 (520)
T ss_pred EECCCC
Confidence 998874
No 320
>PRK12743 oxidoreductase; Provisional
Probab=96.25 E-value=0.027 Score=57.74 Aligned_cols=80 Identities=10% Similarity=0.063 Sum_probs=51.6
Q ss_pred CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEec-ChHHHHH----HHhCCCcE-E--EeCCccc-hhHHHHHHHhcCCCe
Q psy14589 111 PDTLFIIGANRGNGLAAIQVGKAYGLTVFASVG-CPVGVAK----AYGLGADY-V--VDHTIRE-LDRFANQILSYGSEL 181 (655)
Q Consensus 111 Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~-s~~k~~~----a~~LGAd~-v--Id~~~~~-~~d~~~~i~~~~~gv 181 (655)
+++|+|+||+|+||..+++.....|++|+.+.+ +.++.+. ++..|... + .|..+.. .+.+.+.+.+..+++
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI 81 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 568999999999999999988889999987754 3333322 23455432 2 3444321 112333444434478
Q ss_pred eEEEeCCCc
Q psy14589 182 DADHPGFTD 190 (655)
Q Consensus 182 DvV~D~vG~ 190 (655)
|+++.+.|.
T Consensus 82 d~li~~ag~ 90 (256)
T PRK12743 82 DVLVNNAGA 90 (256)
T ss_pred CEEEECCCC
Confidence 999998874
No 321
>KOG1014|consensus
Probab=96.23 E-value=0.028 Score=59.66 Aligned_cols=80 Identities=14% Similarity=0.089 Sum_probs=58.0
Q ss_pred CCCCEEEEEcCCCchHH-HHHHHHHHcCCeEEEEecChHHHHHHH-----hCCC---cEEEeCCccchhHHHHHHHhc-C
Q psy14589 109 PEPDTLFIIGANRGNGL-AAIQVGKAYGLTVFASVGCPVGVAKAY-----GLGA---DYVVDHTIRELDRFANQILSY-G 178 (655)
Q Consensus 109 ~~Gd~VLI~GasGgVG~-~avQlAk~~Ga~Viat~~s~~k~~~a~-----~LGA---d~vId~~~~~~~d~~~~i~~~-~ 178 (655)
+.|+|.+|+||+.|||. .|-++|| +|.+|+.+.|+++|++.++ +.++ ..++|.++.+ ..-+.+++. .
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAk-rG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~--~~ye~i~~~l~ 123 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAK-RGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGD--EVYEKLLEKLA 123 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCc--hhHHHHHHHhc
Confidence 46799999999999996 5667888 8999999999999998763 2342 3347877752 223344443 3
Q ss_pred C-CeeEEEeCCCcc
Q psy14589 179 S-ELDADHPGFTDP 191 (655)
Q Consensus 179 ~-gvDvV~D~vG~~ 191 (655)
+ .+-+.++++|-.
T Consensus 124 ~~~VgILVNNvG~~ 137 (312)
T KOG1014|consen 124 GLDVGILVNNVGMS 137 (312)
T ss_pred CCceEEEEeccccc
Confidence 3 677789999876
No 322
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=96.22 E-value=0.018 Score=58.28 Aligned_cols=81 Identities=16% Similarity=0.132 Sum_probs=51.4
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEec-ChHHH----HHHHhCCCcEE---EeCCccc-hhHHHHHHHhcCCC
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVG-CPVGV----AKAYGLGADYV---VDHTIRE-LDRFANQILSYGSE 180 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~-s~~k~----~~a~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~g 180 (655)
+|.+++|+|++|+||..+++.....|++|+++.+ ++.+. +.+++.|+... .|..+.. ..++.+.+.+..++
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGE 81 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 4678999999999999999888888999877543 22222 22334565433 3444321 11223333333457
Q ss_pred eeEEEeCCCc
Q psy14589 181 LDADHPGFTD 190 (655)
Q Consensus 181 vDvV~D~vG~ 190 (655)
+|+++.+.|.
T Consensus 82 id~li~~ag~ 91 (246)
T PRK12938 82 IDVLVNNAGI 91 (246)
T ss_pred CCEEEECCCC
Confidence 9999999885
No 323
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=96.21 E-value=0.03 Score=57.36 Aligned_cols=80 Identities=15% Similarity=0.108 Sum_probs=52.4
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcE---EEeCCccc-hhHHHHHHHhcCCCe
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADY---VVDHTIRE-LDRFANQILSYGSEL 181 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~---vId~~~~~-~~d~~~~i~~~~~gv 181 (655)
.|.+|+|+||+|+||...++.....|++|++++++ ++.+.+ .+.|... .+|..+.. .+.+.+.+.+..+++
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i 92 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKI 92 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 68899999999999999998888889999988876 333222 2344321 13444321 112333333334578
Q ss_pred eEEEeCCCc
Q psy14589 182 DADHPGFTD 190 (655)
Q Consensus 182 DvV~D~vG~ 190 (655)
|+++.+.|.
T Consensus 93 d~li~~ag~ 101 (258)
T PRK06935 93 DILVNNAGT 101 (258)
T ss_pred CEEEECCCC
Confidence 999998874
No 324
>PRK07102 short chain dehydrogenase; Provisional
Probab=96.21 E-value=0.027 Score=57.05 Aligned_cols=77 Identities=18% Similarity=0.067 Sum_probs=51.2
Q ss_pred CEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hCCCcEE----EeCCccchhHHHHHHHhcCCCeeE
Q psy14589 112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GLGADYV----VDHTIRELDRFANQILSYGSELDA 183 (655)
Q Consensus 112 d~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~LGAd~v----Id~~~~~~~d~~~~i~~~~~gvDv 183 (655)
++|+|+||+|++|...++.....|++|+++++++++.+.+. ..+...+ .|..+. +++.+.+.+....+|+
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~--~~~~~~~~~~~~~~d~ 79 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDT--ASHAAFLDSLPALPDI 79 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCCh--HHHHHHHHHHhhcCCE
Confidence 57999999999999999888788999999999887665432 1222222 233332 2333434433335799
Q ss_pred EEeCCCc
Q psy14589 184 DHPGFTD 190 (655)
Q Consensus 184 V~D~vG~ 190 (655)
++.++|.
T Consensus 80 vv~~ag~ 86 (243)
T PRK07102 80 VLIAVGT 86 (243)
T ss_pred EEECCcC
Confidence 9987764
No 325
>PRK06523 short chain dehydrogenase; Provisional
Probab=96.20 E-value=0.016 Score=59.32 Aligned_cols=78 Identities=17% Similarity=0.158 Sum_probs=51.1
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcE-EEeCCccc-hhHHHHHHHhcCCCeeEEEeC
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADY-VVDHTIRE-LDRFANQILSYGSELDADHPG 187 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~-vId~~~~~-~~d~~~~i~~~~~gvDvV~D~ 187 (655)
+|++|+|+||+|+||..+++.....|++|+++++++.+. ..-.... ..|..+.. .+.+.+.+.+..+++|+++.+
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ 84 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD---LPEGVEFVAADLTTAEGCAAVARAVLERLGGVDILVHV 84 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh---cCCceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 688999999999999999988778899999998875432 1111111 13444321 112233344434579999999
Q ss_pred CCc
Q psy14589 188 FTD 190 (655)
Q Consensus 188 vG~ 190 (655)
+|.
T Consensus 85 ag~ 87 (260)
T PRK06523 85 LGG 87 (260)
T ss_pred Ccc
Confidence 873
No 326
>PRK08303 short chain dehydrogenase; Provisional
Probab=96.19 E-value=0.028 Score=59.87 Aligned_cols=80 Identities=21% Similarity=0.243 Sum_probs=52.0
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh----------HHHHH----HHhCCCcEE---EeCCccc-hhHHH
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCP----------VGVAK----AYGLGADYV---VDHTIRE-LDRFA 171 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~----------~k~~~----a~~LGAd~v---Id~~~~~-~~d~~ 171 (655)
.|.+++|+||++|||..+++.....|++|++++++. ++.+. +.+.|.... .|..+.. .+.+.
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~ 86 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALV 86 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence 688999999999999999988888899999988763 23222 233443221 3443321 12233
Q ss_pred HHHHhcCCCeeEEEeCC-C
Q psy14589 172 NQILSYGSELDADHPGF-T 189 (655)
Q Consensus 172 ~~i~~~~~gvDvV~D~v-G 189 (655)
+.+.+..+++|+++.++ |
T Consensus 87 ~~~~~~~g~iDilVnnA~g 105 (305)
T PRK08303 87 ERIDREQGRLDILVNDIWG 105 (305)
T ss_pred HHHHHHcCCccEEEECCcc
Confidence 34433334799999887 5
No 327
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=96.19 E-value=0.024 Score=57.71 Aligned_cols=77 Identities=16% Similarity=0.087 Sum_probs=53.6
Q ss_pred CEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh-CCCcEE---EeCCccchhHHHH---HHHhcCCCeeEE
Q psy14589 112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG-LGADYV---VDHTIRELDRFAN---QILSYGSELDAD 184 (655)
Q Consensus 112 d~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~-LGAd~v---Id~~~~~~~d~~~---~i~~~~~gvDvV 184 (655)
.+|+|+||+|++|...++.+...|++|+++++++++.+.+.+ +|.... .|-.+. +++.+ .+.+..+++|++
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~--~~i~~~~~~~~~~~~~id~v 78 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNR--AAIEEMLASLPAEWRNIDVL 78 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCH--HHHHHHHHHHHHHcCCCCEE
Confidence 368999999999999998888889999999999887766543 444321 244332 22333 333333479999
Q ss_pred EeCCCc
Q psy14589 185 HPGFTD 190 (655)
Q Consensus 185 ~D~vG~ 190 (655)
+.++|.
T Consensus 79 i~~ag~ 84 (248)
T PRK10538 79 VNNAGL 84 (248)
T ss_pred EECCCc
Confidence 988874
No 328
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=96.18 E-value=0.086 Score=52.22 Aligned_cols=77 Identities=19% Similarity=0.056 Sum_probs=52.7
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh-C----CCcEE-EeCCccchhHHHHHHHhcCCCeeE
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG-L----GADYV-VDHTIRELDRFANQILSYGSELDA 183 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~-L----GAd~v-Id~~~~~~~d~~~~i~~~~~gvDv 183 (655)
++.+++|.|++|++|..+++.+...|++|+.+.++.++.+.+.+ + +.... .+..+. +++.+.+. ++|+
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~--~~~~~~~~----~~di 100 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDD--AARAAAIK----GADV 100 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCH--HHHHHHHh----cCCE
Confidence 78899999999999998888777789999999998877665432 2 33221 222221 23333332 6899
Q ss_pred EEeCCCcch
Q psy14589 184 DHPGFTDPV 192 (655)
Q Consensus 184 V~D~vG~~~ 192 (655)
|+.+++...
T Consensus 101 Vi~at~~g~ 109 (194)
T cd01078 101 VFAAGAAGV 109 (194)
T ss_pred EEECCCCCc
Confidence 999876554
No 329
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=96.18 E-value=0.029 Score=57.19 Aligned_cols=81 Identities=16% Similarity=0.123 Sum_probs=54.2
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCc-EE--EeCCccc-hhHHHHHHHhcCCCe
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGAD-YV--VDHTIRE-LDRFANQILSYGSEL 181 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd-~v--Id~~~~~-~~d~~~~i~~~~~gv 181 (655)
+|.+++|+||+|+||..+++.....|++|+.+++++++.+.+ ++.|.. .. .|..+.. ..++.+.+.+..+++
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 89 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGRL 89 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 789999999999999999987777899999999987765443 234422 12 2444321 112223333333478
Q ss_pred eEEEeCCCc
Q psy14589 182 DADHPGFTD 190 (655)
Q Consensus 182 DvV~D~vG~ 190 (655)
|+++.++|.
T Consensus 90 d~vi~~ag~ 98 (256)
T PRK06124 90 DILVNNVGA 98 (256)
T ss_pred CEEEECCCC
Confidence 999998875
No 330
>PRK06398 aldose dehydrogenase; Validated
Probab=96.16 E-value=0.007 Score=62.31 Aligned_cols=76 Identities=17% Similarity=0.111 Sum_probs=51.5
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc-EEEeCCccc-hhHHHHHHHhcCCCeeEEEeC
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD-YVVDHTIRE-LDRFANQILSYGSELDADHPG 187 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd-~vId~~~~~-~~d~~~~i~~~~~gvDvV~D~ 187 (655)
.|++++|+|++||||..+++.....|++|+++++++++.. ... ...|..+.. .+++.+.+.+..+++|+++.+
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~ 79 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYN-----DVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVNN 79 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccC-----ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 6789999999999999999888889999999988754321 111 113444431 112333343333479999998
Q ss_pred CCc
Q psy14589 188 FTD 190 (655)
Q Consensus 188 vG~ 190 (655)
.|.
T Consensus 80 Ag~ 82 (258)
T PRK06398 80 AGI 82 (258)
T ss_pred CCC
Confidence 874
No 331
>PRK06720 hypothetical protein; Provisional
Probab=96.15 E-value=0.042 Score=53.66 Aligned_cols=82 Identities=15% Similarity=0.040 Sum_probs=53.3
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcE-E--EeCCccc-hhHHHHHHHhcCCCe
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADY-V--VDHTIRE-LDRFANQILSYGSEL 181 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~-v--Id~~~~~-~~d~~~~i~~~~~gv 181 (655)
.|.+++|+||+||+|...+......|++|+.++++++..+.+ ++.|... + .|.++.. ...+.+.+.+..+++
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~i 94 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRI 94 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 688999999999999998887777899999999887654332 2335332 2 2333221 012233333333478
Q ss_pred eEEEeCCCcc
Q psy14589 182 DADHPGFTDP 191 (655)
Q Consensus 182 DvV~D~vG~~ 191 (655)
|+++.++|..
T Consensus 95 DilVnnAG~~ 104 (169)
T PRK06720 95 DMLFQNAGLY 104 (169)
T ss_pred CEEEECCCcC
Confidence 9999988753
No 332
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.15 E-value=0.026 Score=58.21 Aligned_cols=81 Identities=12% Similarity=0.014 Sum_probs=52.4
Q ss_pred CCCEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecChHHH---HHH-HhCCCcEE--EeCCccc-hhHHHHHHHhcCCC
Q psy14589 110 EPDTLFIIGAN--RGNGLAAIQVGKAYGLTVFASVGCPVGV---AKA-YGLGADYV--VDHTIRE-LDRFANQILSYGSE 180 (655)
Q Consensus 110 ~Gd~VLI~Gas--GgVG~~avQlAk~~Ga~Viat~~s~~k~---~~a-~~LGAd~v--Id~~~~~-~~d~~~~i~~~~~g 180 (655)
+|++++|+||+ +|||..+++.....|++|+.++++++.. +.+ ++++...+ .|-++.. .+.+.+.+.+..++
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 88 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWGR 88 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcCC
Confidence 68999999998 4999999887777899999988875432 222 34443333 2433321 12233344433357
Q ss_pred eeEEEeCCCc
Q psy14589 181 LDADHPGFTD 190 (655)
Q Consensus 181 vDvV~D~vG~ 190 (655)
+|+++.++|.
T Consensus 89 ld~lv~nAg~ 98 (258)
T PRK07533 89 LDFLLHSIAF 98 (258)
T ss_pred CCEEEEcCcc
Confidence 8999988874
No 333
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=96.14 E-value=0.034 Score=57.25 Aligned_cols=81 Identities=21% Similarity=0.104 Sum_probs=54.5
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcEE---EeCCccc-hhHHHHHHHhcCCCe
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADYV---VDHTIRE-LDRFANQILSYGSEL 181 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~gv 181 (655)
+|.+++|+|++|+||..++......|++|+.+++++++.+.+ ++.|.... .|-++.. ..++.+.+.+..+++
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 88 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVI 88 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 678999999999999988877677899999999888765443 23454321 3444321 112333333333479
Q ss_pred eEEEeCCCc
Q psy14589 182 DADHPGFTD 190 (655)
Q Consensus 182 DvV~D~vG~ 190 (655)
|+++.+.|.
T Consensus 89 d~li~~ag~ 97 (265)
T PRK07097 89 DILVNNAGI 97 (265)
T ss_pred CEEEECCCC
Confidence 999999875
No 334
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=96.14 E-value=0.027 Score=58.38 Aligned_cols=81 Identities=19% Similarity=0.038 Sum_probs=53.7
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcE-E--EeCCccc-hhHHHHHHHhcCCCe
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADY-V--VDHTIRE-LDRFANQILSYGSEL 181 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~-v--Id~~~~~-~~d~~~~i~~~~~gv 181 (655)
.|.+++|+||+|++|..+++.....|++|+++++++++.+.+ ++.|... . .|..+.. ...+.+.+.+..+++
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 88 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPC 88 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 688999999999999999988888899999999887655443 2334321 1 2333321 112223333333478
Q ss_pred eEEEeCCCc
Q psy14589 182 DADHPGFTD 190 (655)
Q Consensus 182 DvV~D~vG~ 190 (655)
|+++.++|.
T Consensus 89 d~li~~ag~ 97 (278)
T PRK08277 89 DILINGAGG 97 (278)
T ss_pred CEEEECCCC
Confidence 999998874
No 335
>PRK06197 short chain dehydrogenase; Provisional
Probab=96.11 E-value=0.027 Score=59.51 Aligned_cols=81 Identities=21% Similarity=0.107 Sum_probs=52.6
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----Hh-C-CCc-EE--EeCCccc-hhHHHHHHHhcCC
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YG-L-GAD-YV--VDHTIRE-LDRFANQILSYGS 179 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~-L-GAd-~v--Id~~~~~-~~d~~~~i~~~~~ 179 (655)
.|.+|+|+||+||||..+++.....|++|+++++++++.+.+ .+ . +.. .+ +|..+.. ...+.+.+.+..+
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~ 94 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAYP 94 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhCC
Confidence 688999999999999999887777899999999887765433 11 1 221 11 3444321 1122233333334
Q ss_pred CeeEEEeCCCc
Q psy14589 180 ELDADHPGFTD 190 (655)
Q Consensus 180 gvDvV~D~vG~ 190 (655)
++|+++.++|.
T Consensus 95 ~iD~li~nAg~ 105 (306)
T PRK06197 95 RIDLLINNAGV 105 (306)
T ss_pred CCCEEEECCcc
Confidence 79999998874
No 336
>PRK06914 short chain dehydrogenase; Provisional
Probab=96.10 E-value=0.038 Score=57.22 Aligned_cols=79 Identities=20% Similarity=0.159 Sum_probs=53.1
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hCCCc---EE--EeCCccchhHHHH--HHHhcC
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GLGAD---YV--VDHTIRELDRFAN--QILSYG 178 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~LGAd---~v--Id~~~~~~~d~~~--~i~~~~ 178 (655)
.+.+++|+||+|++|...++.....|++|+++++++++.+.+. ..+.+ .+ .|.++. +++.+ .+.+..
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~--~~~~~~~~~~~~~ 79 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQ--NSIHNFQLVLKEI 79 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCH--HHHHHHHHHHHhc
Confidence 4678999999999999999887788999999998877655442 22321 12 344443 23332 222223
Q ss_pred CCeeEEEeCCCc
Q psy14589 179 SELDADHPGFTD 190 (655)
Q Consensus 179 ~gvDvV~D~vG~ 190 (655)
+++|+++.+.|.
T Consensus 80 ~~id~vv~~ag~ 91 (280)
T PRK06914 80 GRIDLLVNNAGY 91 (280)
T ss_pred CCeeEEEECCcc
Confidence 478999999875
No 337
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=96.09 E-value=0.033 Score=61.36 Aligned_cols=91 Identities=16% Similarity=0.039 Sum_probs=64.5
Q ss_pred CEEEEEcCCCchHHHHHHHHHHcC-CeEEEEecChHHHHHHHhCC---C-cEEEeCCccchhHHHHHHHhcCCCeeEEEe
Q psy14589 112 DTLFIIGANRGNGLAAIQVGKAYG-LTVFASVGCPVGVAKAYGLG---A-DYVVDHTIRELDRFANQILSYGSELDADHP 186 (655)
Q Consensus 112 d~VLI~GasGgVG~~avQlAk~~G-a~Viat~~s~~k~~~a~~LG---A-d~vId~~~~~~~d~~~~i~~~~~gvDvV~D 186 (655)
.+|+|.|+ |+||+.+++.+.+.| .+|++.+++.++++.+...+ . ...+|-.+. +.+.+.++ +.|+||+
T Consensus 2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~--~al~~li~----~~d~VIn 74 (389)
T COG1748 2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADV--DALVALIK----DFDLVIN 74 (389)
T ss_pred CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccCh--HHHHHHHh----cCCEEEE
Confidence 46999999 999999999988888 69999999999998887654 1 223454432 13334443 4699999
Q ss_pred CCCcchHHHHHHHHHHhccccceEEE
Q psy14589 187 GFTDPVYRARRKYFADLAFNYKHFFF 212 (655)
Q Consensus 187 ~vG~~~~~~l~~~l~~l~~gGrlv~v 212 (655)
+.+... -...++++...|.-++-
T Consensus 75 ~~p~~~---~~~i~ka~i~~gv~yvD 97 (389)
T COG1748 75 AAPPFV---DLTILKACIKTGVDYVD 97 (389)
T ss_pred eCCchh---hHHHHHHHHHhCCCEEE
Confidence 998874 34666555555655554
No 338
>PRK07791 short chain dehydrogenase; Provisional
Probab=96.08 E-value=0.036 Score=58.16 Aligned_cols=81 Identities=16% Similarity=0.052 Sum_probs=51.9
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh---------HHHHHH----HhCCCcEE---EeCCccc-hhHHHH
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCP---------VGVAKA----YGLGADYV---VDHTIRE-LDRFAN 172 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~---------~k~~~a----~~LGAd~v---Id~~~~~-~~d~~~ 172 (655)
+|.+++|+||++|||...++.....|++|++++++. ++.+.+ ++.|.... .|..+.. ..++.+
T Consensus 5 ~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~ 84 (286)
T PRK07791 5 DGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLVD 84 (286)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHH
Confidence 688999999999999999887777899998887654 333222 23343322 2444321 112333
Q ss_pred HHHhcCCCeeEEEeCCCc
Q psy14589 173 QILSYGSELDADHPGFTD 190 (655)
Q Consensus 173 ~i~~~~~gvDvV~D~vG~ 190 (655)
.+.+..+++|+++.+.|.
T Consensus 85 ~~~~~~g~id~lv~nAG~ 102 (286)
T PRK07791 85 AAVETFGGLDVLVNNAGI 102 (286)
T ss_pred HHHHhcCCCCEEEECCCC
Confidence 333333579999998875
No 339
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=96.06 E-value=0.038 Score=52.33 Aligned_cols=80 Identities=20% Similarity=0.177 Sum_probs=50.2
Q ss_pred CEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecC--hHHHHHH----HhCCCcEE-E--eCCccc-hhHHHHHHHhcCCC
Q psy14589 112 DTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGC--PVGVAKA----YGLGADYV-V--DHTIRE-LDRFANQILSYGSE 180 (655)
Q Consensus 112 d~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s--~~k~~~a----~~LGAd~v-I--d~~~~~-~~d~~~~i~~~~~g 180 (655)
++|+|+||+||||...++.....|+ +|+.+.++ .++.+.+ +..|.... + |..+.. ...+.+.+.+..+.
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 4799999999999988876666677 77888877 3443333 44563222 2 323221 12334444433458
Q ss_pred eeEEEeCCCcc
Q psy14589 181 LDADHPGFTDP 191 (655)
Q Consensus 181 vDvV~D~vG~~ 191 (655)
+|+++.+.|..
T Consensus 81 ld~li~~ag~~ 91 (167)
T PF00106_consen 81 LDILINNAGIF 91 (167)
T ss_dssp ESEEEEECSCT
T ss_pred ccccccccccc
Confidence 99999988764
No 340
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=96.06 E-value=0.025 Score=57.17 Aligned_cols=88 Identities=17% Similarity=0.197 Sum_probs=60.5
Q ss_pred EEEEcCCCchHHHHHHHHHHcCCeEEEEecChHH--HHHHHhCCCcEEE-eCCccchhHHHHHHHhcCCCeeEEEeCCCc
Q psy14589 114 LFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVG--VAKAYGLGADYVV-DHTIRELDRFANQILSYGSELDADHPGFTD 190 (655)
Q Consensus 114 VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k--~~~a~~LGAd~vI-d~~~~~~~d~~~~i~~~~~gvDvV~D~vG~ 190 (655)
|+|.||+|.+|...++.+...|.+|.+.+|++.+ .+.++..|+..|. |+.+. +.+.+.+ .|+|.|+-+++.
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~~~~--~~l~~al----~g~d~v~~~~~~ 74 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVVEADYDDP--ESLVAAL----KGVDAVFSVTPP 74 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEEES-TT-H--HHHHHHH----TTCSEEEEESSC
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEeecccCCH--HHHHHHH----cCCceEEeecCc
Confidence 7899999999999999888888899999998643 4556789997552 23221 2333333 389999998883
Q ss_pred ---chHHHHHHHHHHhcccc
Q psy14589 191 ---PVYRARRKYFADLAFNY 207 (655)
Q Consensus 191 ---~~~~~l~~~l~~l~~gG 207 (655)
...+.....+++.+.-|
T Consensus 75 ~~~~~~~~~~~li~Aa~~ag 94 (233)
T PF05368_consen 75 SHPSELEQQKNLIDAAKAAG 94 (233)
T ss_dssp SCCCHHHHHHHHHHHHHHHT
T ss_pred chhhhhhhhhhHHHhhhccc
Confidence 33223455566666666
No 341
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=96.05 E-value=0.079 Score=53.21 Aligned_cols=95 Identities=15% Similarity=-0.005 Sum_probs=61.2
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh-CCCcEEEeCCccch-----------hH-H-HHHHH
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG-LGADYVVDHTIREL-----------DR-F-ANQIL 175 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~-LGAd~vId~~~~~~-----------~d-~-~~~i~ 175 (655)
.|.+|+|.|. |.+|..+++.+...|++|+++++++++.+.+.+ +|+.. ++..+... .+ + .+.+.
T Consensus 27 ~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~~-v~~~~l~~~~~Dv~vp~A~~~~I~~~~~~ 104 (200)
T cd01075 27 EGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGATV-VAPEEIYSVDADVFAPCALGGVINDDTIP 104 (200)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEE-EcchhhccccCCEEEecccccccCHHHHH
Confidence 7899999999 899999999999999999999998887766643 46432 22211000 00 0 01111
Q ss_pred hcCCCeeEEEeCCCcchHHHH-HHHHHHhccccceEE
Q psy14589 176 SYGSELDADHPGFTDPVYRAR-RKYFADLAFNYKHFF 211 (655)
Q Consensus 176 ~~~~gvDvV~D~vG~~~~~~l-~~~l~~l~~gGrlv~ 211 (655)
+. +.++|++..-++. . .+.-+.|+..|.+++
T Consensus 105 ~l--~~~~v~~~AN~~~---~~~~~~~~L~~~Gi~~~ 136 (200)
T cd01075 105 QL--KAKAIAGAANNQL---ADPRHGQMLHERGILYA 136 (200)
T ss_pred Hc--CCCEEEECCcCcc---CCHhHHHHHHHCCCEEe
Confidence 11 4567777666654 3 466666777776554
No 342
>cd04884 ACT_CBS C-terminal ACT domain of the cystathionine beta-synthase (CBS) domain protein found in Thermotoga maritima, Tm0935, and delta proteobacteria. This CD includes the C-terminal ACT domain of the cystathionine beta-synthase (CBS) domain protein found in Thermotoga maritima, Tm0935, and delta proteobacteria. This protein has two N-terminal tandem CBS domains and a single C-terminal ACT domain. The CBS domain is found in a wide range of proteins, often in tandem arrangements and together with a variety of other functional domains. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=96.04 E-value=0.031 Score=46.28 Aligned_cols=63 Identities=13% Similarity=0.241 Sum_probs=45.4
Q ss_pred EEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEec--CCchHHHHHHHHHcc
Q psy14589 264 VIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECA--PGGDLSSVIESLRSS 327 (655)
Q Consensus 264 l~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~e--g~~~v~~~l~~L~~~ 327 (655)
+.+.+++ +||+|+++++.+++.|+|+..+...+.....+....+|.++ ....++++++.|++.
T Consensus 2 l~v~~~d-~pG~L~~l~~~i~~~g~nI~~i~~~~~~~~~~~~~~~v~v~~e~~~~~~~i~~~L~~~ 66 (72)
T cd04884 2 FTFLLED-KPGTLKPVVDTLREFNARIISILTAFEDAPDGMRRVFIRVTPMDRSKENELIEELKAK 66 (72)
T ss_pred EEEEecC-CCccHHHHHHHHHHCCCeEEEEEeccccCCCCccEEEEEEEEecchHHHHHHHHHhCc
Confidence 3456777 99999999999999999999887766543344344455444 343477888888766
No 343
>PRK08278 short chain dehydrogenase; Provisional
Probab=96.03 E-value=0.035 Score=57.72 Aligned_cols=81 Identities=19% Similarity=0.177 Sum_probs=52.0
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHH-------HH----HHHhCCCcEE---EeCCccc-hhHHHHHH
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVG-------VA----KAYGLGADYV---VDHTIRE-LDRFANQI 174 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k-------~~----~a~~LGAd~v---Id~~~~~-~~d~~~~i 174 (655)
.|.+++|+||+|++|..+++.....|++|++++++.++ ++ .+++.|.... .|..+.. ...+.+.+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~ 84 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKA 84 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence 57899999999999999998877889999999886532 11 1233444321 3444431 01222233
Q ss_pred HhcCCCeeEEEeCCCc
Q psy14589 175 LSYGSELDADHPGFTD 190 (655)
Q Consensus 175 ~~~~~gvDvV~D~vG~ 190 (655)
.+..+++|+++.++|.
T Consensus 85 ~~~~g~id~li~~ag~ 100 (273)
T PRK08278 85 VERFGGIDICVNNASA 100 (273)
T ss_pred HHHhCCCCEEEECCCC
Confidence 3333478999998875
No 344
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=96.03 E-value=0.03 Score=56.64 Aligned_cols=79 Identities=18% Similarity=0.032 Sum_probs=53.2
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcE-E--EeCCccchhHHHHHH---HhcCC
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADY-V--VDHTIRELDRFANQI---LSYGS 179 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~-v--Id~~~~~~~d~~~~i---~~~~~ 179 (655)
+|.+++|+||+|+||..+++.....|++|++++++.++.+.+ ++.+... + .|..+. +++.+.+ .+..+
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~~~~ 79 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDR--DSVDTAVAAAEQALG 79 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCH--HHHHHHHHHHHHHcC
Confidence 578999999999999999988888899999999888765544 2233222 2 233332 2233323 22234
Q ss_pred CeeEEEeCCCc
Q psy14589 180 ELDADHPGFTD 190 (655)
Q Consensus 180 gvDvV~D~vG~ 190 (655)
++|+++.+.|.
T Consensus 80 ~~d~vi~~ag~ 90 (250)
T TIGR03206 80 PVDVLVNNAGW 90 (250)
T ss_pred CCCEEEECCCC
Confidence 78999998874
No 345
>PRK07402 precorrin-6B methylase; Provisional
Probab=96.02 E-value=0.062 Score=53.30 Aligned_cols=100 Identities=16% Similarity=0.053 Sum_probs=61.0
Q ss_pred CCCCCCCEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecChHHHHHHH----hCCCcEEEeCCccchhHHHHHHHhcCCC
Q psy14589 106 LYTPEPDTLFIIGANRGNGLAAIQVGKAY-GLTVFASVGCPVGVAKAY----GLGADYVVDHTIRELDRFANQILSYGSE 180 (655)
Q Consensus 106 ~l~~~Gd~VLI~GasGgVG~~avQlAk~~-Ga~Viat~~s~~k~~~a~----~LGAd~vId~~~~~~~d~~~~i~~~~~g 180 (655)
.+ ++|++|+=.|+ |.|..++.+++.. +.+|++++.+++..+.++ ++|.+.+--... +..+.+......
T Consensus 37 ~~-~~~~~VLDiG~--G~G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~~----d~~~~~~~~~~~ 109 (196)
T PRK07402 37 RL-EPDSVLWDIGA--GTGTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIEG----SAPECLAQLAPA 109 (196)
T ss_pred CC-CCCCEEEEeCC--CCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEEC----chHHHHhhCCCC
Confidence 45 68889887775 5565667777664 579999999998777664 356543211111 222222222222
Q ss_pred ee-EEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589 181 LD-ADHPGFTDPVYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 181 vD-vV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
.| ++++. +....+.++.+.+.|++||++++..
T Consensus 110 ~d~v~~~~-~~~~~~~l~~~~~~LkpgG~li~~~ 142 (196)
T PRK07402 110 PDRVCIEG-GRPIKEILQAVWQYLKPGGRLVATA 142 (196)
T ss_pred CCEEEEEC-CcCHHHHHHHHHHhcCCCeEEEEEe
Confidence 34 44543 3332244788899999999988864
No 346
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=96.01 E-value=0.023 Score=57.59 Aligned_cols=78 Identities=24% Similarity=0.138 Sum_probs=52.5
Q ss_pred CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh----CCCcE-E--EeCCccchhHHHH---HHHhcCCC
Q psy14589 111 PDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG----LGADY-V--VDHTIRELDRFAN---QILSYGSE 180 (655)
Q Consensus 111 Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~----LGAd~-v--Id~~~~~~~d~~~---~i~~~~~g 180 (655)
|.+|||+|++|++|..++......|++|+++++++++.+.+.+ .+... + .|..+. +++.+ .+.+..++
T Consensus 1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~ 78 (255)
T TIGR01963 1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKE--DEIADMIAAAAAEFGG 78 (255)
T ss_pred CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCH--HHHHHHHHHHHHhcCC
Confidence 4579999999999999998777789999999998876655532 23321 1 244432 22322 33333346
Q ss_pred eeEEEeCCCc
Q psy14589 181 LDADHPGFTD 190 (655)
Q Consensus 181 vDvV~D~vG~ 190 (655)
+|+|+-+.|.
T Consensus 79 ~d~vi~~a~~ 88 (255)
T TIGR01963 79 LDILVNNAGI 88 (255)
T ss_pred CCEEEECCCC
Confidence 8999887764
No 347
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=95.99 E-value=0.033 Score=56.07 Aligned_cols=81 Identities=14% Similarity=0.044 Sum_probs=53.9
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hCCCcE-E--EeCCccc-hhHHHHHHHhcCCCeeEE
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GLGADY-V--VDHTIRE-LDRFANQILSYGSELDAD 184 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~LGAd~-v--Id~~~~~-~~d~~~~i~~~~~gvDvV 184 (655)
++.+++|+||+|+||..+++.....|++|+.++++.++.+.+. .++... + .|..+.. .+++.+.+.+..+++|++
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 84 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDIL 84 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 5779999999999999988877778999988888777765543 344321 1 2333321 112223333333479999
Q ss_pred EeCCCc
Q psy14589 185 HPGFTD 190 (655)
Q Consensus 185 ~D~vG~ 190 (655)
+.++|.
T Consensus 85 i~~ag~ 90 (245)
T PRK12936 85 VNNAGI 90 (245)
T ss_pred EECCCC
Confidence 999884
No 348
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.98 E-value=0.031 Score=57.72 Aligned_cols=82 Identities=11% Similarity=0.080 Sum_probs=51.5
Q ss_pred CCCEEEEEcC--CCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcEE--EeCCccc-hhHHHHHHHhcCCC
Q psy14589 110 EPDTLFIIGA--NRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADYV--VDHTIRE-LDRFANQILSYGSE 180 (655)
Q Consensus 110 ~Gd~VLI~Ga--sGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~v--Id~~~~~-~~d~~~~i~~~~~g 180 (655)
.|.+++|+|| ++|||...++.....|++|+.+.+++...+.+ +++|.... .|-.+.. .+++.+.+.+..++
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 84 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWDG 84 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 6789999996 67999998887777899998876553222222 23343222 3444321 12233344443457
Q ss_pred eeEEEeCCCcc
Q psy14589 181 LDADHPGFTDP 191 (655)
Q Consensus 181 vDvV~D~vG~~ 191 (655)
+|+++.++|-.
T Consensus 85 iD~lVnnAG~~ 95 (261)
T PRK08690 85 LDGLVHSIGFA 95 (261)
T ss_pred CcEEEECCccC
Confidence 99999998753
No 349
>PRK07775 short chain dehydrogenase; Provisional
Probab=95.97 E-value=0.048 Score=56.63 Aligned_cols=80 Identities=20% Similarity=0.148 Sum_probs=53.5
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcEE---EeCCccchhHHHHHH---HhcCC
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADYV---VDHTIRELDRFANQI---LSYGS 179 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~v---Id~~~~~~~d~~~~i---~~~~~ 179 (655)
.+.+|+|+||+|+||..+++.....|++|++++++.++.+.+ +..|.... .|..+. +++.+.+ .+..+
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~--~~~~~~~~~~~~~~~ 86 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDP--DSVKSFVAQAEEALG 86 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCH--HHHHHHHHHHHHhcC
Confidence 556899999999999999987777899999988877655433 23454322 244432 2333322 22234
Q ss_pred CeeEEEeCCCcc
Q psy14589 180 ELDADHPGFTDP 191 (655)
Q Consensus 180 gvDvV~D~vG~~ 191 (655)
++|+++.++|..
T Consensus 87 ~id~vi~~Ag~~ 98 (274)
T PRK07775 87 EIEVLVSGAGDT 98 (274)
T ss_pred CCCEEEECCCcC
Confidence 789999988753
No 350
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=95.97 E-value=0.03 Score=57.25 Aligned_cols=78 Identities=13% Similarity=-0.025 Sum_probs=51.5
Q ss_pred CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-h----CCCcEE----EeCCccchhHHH---HHHHhcC
Q psy14589 111 PDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-G----LGADYV----VDHTIRELDRFA---NQILSYG 178 (655)
Q Consensus 111 Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~----LGAd~v----Id~~~~~~~d~~---~~i~~~~ 178 (655)
+++|+|+|++|+||..+++.....|++|+.++++.++.+.+. + .|...+ .|.++. ++.. +.+.+..
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~--~~i~~~~~~~~~~~ 79 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSE--QSVLALSRGVDEIF 79 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCH--HHHHHHHHHHHHHc
Confidence 568999999999999999888888999999998876554432 1 232122 243332 2232 2333223
Q ss_pred CCeeEEEeCCCc
Q psy14589 179 SELDADHPGFTD 190 (655)
Q Consensus 179 ~gvDvV~D~vG~ 190 (655)
+++|+++.+.|.
T Consensus 80 ~~id~vv~~ag~ 91 (259)
T PRK12384 80 GRVDLLVYNAGI 91 (259)
T ss_pred CCCCEEEECCCc
Confidence 478999998874
No 351
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=95.94 E-value=0.027 Score=59.38 Aligned_cols=109 Identities=20% Similarity=0.152 Sum_probs=74.0
Q ss_pred HHHHHHhhcCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hCCCcEEEeCCccchhHH
Q psy14589 95 STQYIRHPSKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GLGADYVVDHTIRELDRF 170 (655)
Q Consensus 95 ~TA~~aL~~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~LGAd~vId~~~~~~~d~ 170 (655)
...+..+.+..++ ++|++||=.|+ |=|.+++-+|+..|++|++++-|++..+.++ +.|-..-+...-. |+
T Consensus 58 ~~k~~~~~~kl~L-~~G~~lLDiGC--GWG~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~---d~ 131 (283)
T COG2230 58 RAKLDLILEKLGL-KPGMTLLDIGC--GWGGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQ---DY 131 (283)
T ss_pred HHHHHHHHHhcCC-CCCCEEEEeCC--ChhHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHcCCCcccEEEec---cc
Confidence 3344455567788 99999999898 6688999999999999999999998776664 4565411111000 11
Q ss_pred HHHHHhcCCCeeEE-----EeCCCcchH-HHHHHHHHHhccccceEEEe
Q psy14589 171 ANQILSYGSELDAD-----HPGFTDPVY-RARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 171 ~~~i~~~~~gvDvV-----~D~vG~~~~-~~l~~~l~~l~~gGrlv~v~ 213 (655)
. ...+.+|-| ++.+|.+.+ +-+..+-+.|++||++++..
T Consensus 132 r----d~~e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~ 176 (283)
T COG2230 132 R----DFEEPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHS 176 (283)
T ss_pred c----ccccccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEE
Confidence 1 111135554 567787522 22678888999999999876
No 352
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=95.94 E-value=0.04 Score=60.85 Aligned_cols=80 Identities=23% Similarity=0.238 Sum_probs=54.5
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHH-------HHHh-CCCcEE-EeCCccchhHHHHHHHhcCC
Q psy14589 109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVA-------KAYG-LGADYV-VDHTIRELDRFANQILSYGS 179 (655)
Q Consensus 109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~-------~a~~-LGAd~v-Id~~~~~~~d~~~~i~~~~~ 179 (655)
..|.+|+|+||+|.||..+++.+...|.+|++++++..+.+ .... .++..+ .|..+. +++.+.+...+.
T Consensus 58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~--~~l~~~~~~~~~ 135 (390)
T PLN02657 58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDA--DSLRKVLFSEGD 135 (390)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCH--HHHHHHHHHhCC
Confidence 57889999999999999999888888999999998765421 1111 233333 344442 244444443322
Q ss_pred CeeEEEeCCCc
Q psy14589 180 ELDADHPGFTD 190 (655)
Q Consensus 180 gvDvV~D~vG~ 190 (655)
++|+|+.|+|.
T Consensus 136 ~~D~Vi~~aa~ 146 (390)
T PLN02657 136 PVDVVVSCLAS 146 (390)
T ss_pred CCcEEEECCcc
Confidence 69999998874
No 353
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.92 E-value=0.036 Score=63.12 Aligned_cols=89 Identities=13% Similarity=0.018 Sum_probs=64.4
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCC
Q psy14589 109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGF 188 (655)
Q Consensus 109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~v 188 (655)
.+|++|+|.|. |..|++++++++..|++|++++..+.+.+.+++.|+.. +.... ..+.+. .+|+|+.+.
T Consensus 10 ~~~~~v~V~G~-G~sG~aa~~~L~~~G~~v~~~D~~~~~~~~l~~~g~~~-~~~~~-----~~~~l~----~~D~VV~Sp 78 (488)
T PRK03369 10 LPGAPVLVAGA-GVTGRAVLAALTRFGARPTVCDDDPDALRPHAERGVAT-VSTSD-----AVQQIA----DYALVVTSP 78 (488)
T ss_pred cCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHhCCCEE-EcCcc-----hHhHhh----cCCEEEECC
Confidence 47899999999 99999999999999999999998777666677888844 33221 112222 479999999
Q ss_pred CcchHHHHHHHHHHhccccceEE
Q psy14589 189 TDPVYRARRKYFADLAFNYKHFF 211 (655)
Q Consensus 189 G~~~~~~l~~~l~~l~~gGrlv~ 211 (655)
|-+. -...++..+..|.=|.
T Consensus 79 Gi~~---~~p~~~~a~~~gi~v~ 98 (488)
T PRK03369 79 GFRP---TAPVLAAAAAAGVPIW 98 (488)
T ss_pred CCCC---CCHHHHHHHHCCCcEe
Confidence 9874 3344555556664333
No 354
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=95.90 E-value=0.04 Score=54.84 Aligned_cols=96 Identities=16% Similarity=0.114 Sum_probs=62.9
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecChHHHHHHH----hCCCcEEEeCCccchhHHHHHHHhcCCCeeE
Q psy14589 109 PEPDTLFIIGANRGNGLAAIQVGKAY-GLTVFASVGCPVGVAKAY----GLGADYVVDHTIRELDRFANQILSYGSELDA 183 (655)
Q Consensus 109 ~~Gd~VLI~GasGgVG~~avQlAk~~-Ga~Viat~~s~~k~~~a~----~LGAd~vId~~~~~~~d~~~~i~~~~~gvDv 183 (655)
++|++|+-.|+ |.|..++.+++.. +++|++++.+++..+.++ +.|.+.+ ..... +..+ +.. .+.+|+
T Consensus 44 ~~g~~VLDiGc--GtG~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i-~~~~~---d~~~-~~~-~~~fDl 115 (187)
T PRK00107 44 PGGERVLDVGS--GAGFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNV-TVVHG---RAEE-FGQ-EEKFDV 115 (187)
T ss_pred CCCCeEEEEcC--CCCHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCE-EEEec---cHhh-CCC-CCCccE
Confidence 56899999897 4556666677654 679999999987766553 4666542 22221 2222 212 337999
Q ss_pred EEeCCCcchHHHHHHHHHHhccccceEEE
Q psy14589 184 DHPGFTDPVYRARRKYFADLAFNYKHFFF 212 (655)
Q Consensus 184 V~D~vG~~~~~~l~~~l~~l~~gGrlv~v 212 (655)
|+-.........++.+.+.|++||+++.+
T Consensus 116 V~~~~~~~~~~~l~~~~~~LkpGG~lv~~ 144 (187)
T PRK00107 116 VTSRAVASLSDLVELCLPLLKPGGRFLAL 144 (187)
T ss_pred EEEccccCHHHHHHHHHHhcCCCeEEEEE
Confidence 98644333223478889999999998876
No 355
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.89 E-value=0.058 Score=54.40 Aligned_cols=80 Identities=16% Similarity=0.081 Sum_probs=53.4
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcE-E--EeCCccchhHHHHHHH---hcCC
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADY-V--VDHTIRELDRFANQIL---SYGS 179 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~-v--Id~~~~~~~d~~~~i~---~~~~ 179 (655)
.+.+++|+|++|++|..++......|++|+++++++++.+.+ ...|... + .|..+. +++.+.+. +..+
T Consensus 6 ~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~ 83 (239)
T PRK07666 6 QGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDY--EEVTAAIEQLKNELG 83 (239)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCH--HHHHHHHHHHHHHcC
Confidence 467899999999999999887778899999999987665443 2334322 1 233332 23333333 2234
Q ss_pred CeeEEEeCCCcc
Q psy14589 180 ELDADHPGFTDP 191 (655)
Q Consensus 180 gvDvV~D~vG~~ 191 (655)
++|+++.++|..
T Consensus 84 ~id~vi~~ag~~ 95 (239)
T PRK07666 84 SIDILINNAGIS 95 (239)
T ss_pred CccEEEEcCccc
Confidence 799999988753
No 356
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.89 E-value=0.052 Score=54.98 Aligned_cols=79 Identities=15% Similarity=0.099 Sum_probs=51.4
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEE-EecChHHHHHH----HhCCCcEE---EeCCccchhHHHH---HHHhcC
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFA-SVGCPVGVAKA----YGLGADYV---VDHTIRELDRFAN---QILSYG 178 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Via-t~~s~~k~~~a----~~LGAd~v---Id~~~~~~~d~~~---~i~~~~ 178 (655)
+|.+++|+||+|++|..+++.....|++|++ .+++.++.+.+ ++.|.... .|..+. +++.+ .+.+..
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~ 80 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDV--EKIKEMFAQIDEEF 80 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCH--HHHHHHHHHHHHHc
Confidence 5789999999999999999888888999876 45666554332 33454322 233332 23333 333333
Q ss_pred CCeeEEEeCCCc
Q psy14589 179 SELDADHPGFTD 190 (655)
Q Consensus 179 ~gvDvV~D~vG~ 190 (655)
+++|+++.+.|.
T Consensus 81 ~~id~vi~~ag~ 92 (250)
T PRK08063 81 GRLDVFVNNAAS 92 (250)
T ss_pred CCCCEEEECCCC
Confidence 478999998874
No 357
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=95.89 E-value=0.045 Score=55.24 Aligned_cols=79 Identities=23% Similarity=0.126 Sum_probs=52.0
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcE-E--EeCCccchhHHHHHHH---hcCC
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADY-V--VDHTIRELDRFANQIL---SYGS 179 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~-v--Id~~~~~~~d~~~~i~---~~~~ 179 (655)
.+.+|+|+||+|++|..+++.....|++|+++++++++...+ ++.+... + .|..+. +++.+.+. +..+
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~--~~~~~~~~~~~~~~~ 82 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDR--AALKAAVAAGVEDFG 82 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCH--HHHHHHHHHHHHHhC
Confidence 578999999999999999887777899999999986654332 3334322 1 233332 23333222 2223
Q ss_pred CeeEEEeCCCc
Q psy14589 180 ELDADHPGFTD 190 (655)
Q Consensus 180 gvDvV~D~vG~ 190 (655)
.+|+|+.+.|.
T Consensus 83 ~~d~vi~~ag~ 93 (251)
T PRK12826 83 RLDILVANAGI 93 (251)
T ss_pred CCCEEEECCCC
Confidence 68999988865
No 358
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=95.86 E-value=0.038 Score=61.50 Aligned_cols=75 Identities=13% Similarity=0.013 Sum_probs=50.5
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hCC--CcE-EEeCCccchhHHHHHHHhcCCCeeEEE
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GLG--ADY-VVDHTIRELDRFANQILSYGSELDADH 185 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~LG--Ad~-vId~~~~~~~d~~~~i~~~~~gvDvV~ 185 (655)
+|++|+|+||+||+|..+++.....|++|+++++++++.+... +.+ ... ..|.++. +.+.+.-+++|+++
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~------~~v~~~l~~IDiLI 250 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQE------AALAELLEKVDILI 250 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCH------HHHHHHhCCCCEEE
Confidence 6889999999999999998877778999999988876654322 221 111 1344332 12222223789999
Q ss_pred eCCCc
Q psy14589 186 PGFTD 190 (655)
Q Consensus 186 D~vG~ 190 (655)
.+.|.
T Consensus 251 nnAGi 255 (406)
T PRK07424 251 INHGI 255 (406)
T ss_pred ECCCc
Confidence 88774
No 359
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=95.86 E-value=0.038 Score=58.89 Aligned_cols=80 Identities=28% Similarity=0.275 Sum_probs=53.2
Q ss_pred CCEEEEEcCCCchHHHHHHHHHHcC-CeEEEEecChHHHHHH-HhCCC--c--EE--EeCCccc-hhHHHHHHHhcCCCe
Q psy14589 111 PDTLFIIGANRGNGLAAIQVGKAYG-LTVFASVGCPVGVAKA-YGLGA--D--YV--VDHTIRE-LDRFANQILSYGSEL 181 (655)
Q Consensus 111 Gd~VLI~GasGgVG~~avQlAk~~G-a~Viat~~s~~k~~~a-~~LGA--d--~v--Id~~~~~-~~d~~~~i~~~~~gv 181 (655)
+.+++|+||++|||..+++.....| ++|+.+++++++.+.+ .+++. . .+ .|.++.. ...+.+.+.+..+++
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 82 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPL 82 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 6689999999999999887777789 8999999888766544 33321 1 11 3544421 122333443334579
Q ss_pred eEEEeCCCc
Q psy14589 182 DADHPGFTD 190 (655)
Q Consensus 182 DvV~D~vG~ 190 (655)
|+++.++|.
T Consensus 83 D~lI~nAG~ 91 (314)
T TIGR01289 83 DALVCNAAV 91 (314)
T ss_pred CEEEECCCc
Confidence 999988874
No 360
>PRK07074 short chain dehydrogenase; Provisional
Probab=95.83 E-value=0.056 Score=55.16 Aligned_cols=79 Identities=22% Similarity=0.069 Sum_probs=52.1
Q ss_pred CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hCC---CcE-EEeCCccchhHHHHHHHh---cCCCee
Q psy14589 111 PDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GLG---ADY-VVDHTIRELDRFANQILS---YGSELD 182 (655)
Q Consensus 111 Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~LG---Ad~-vId~~~~~~~d~~~~i~~---~~~gvD 182 (655)
+.+++|+||+|+||...+......|++|+++++++++.+.+. .+. +.. ..|..+. +++...+.+ ..+++|
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~~d 79 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDA--ASLAAALANAAAERGPVD 79 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCH--HHHHHHHHHHHHHcCCCC
Confidence 468999999999999988877778999999999887765443 232 211 1344332 223222222 223689
Q ss_pred EEEeCCCcc
Q psy14589 183 ADHPGFTDP 191 (655)
Q Consensus 183 vV~D~vG~~ 191 (655)
+++.+.|..
T Consensus 80 ~vi~~ag~~ 88 (257)
T PRK07074 80 VLVANAGAA 88 (257)
T ss_pred EEEECCCCC
Confidence 999998753
No 361
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=95.82 E-value=0.05 Score=55.57 Aligned_cols=79 Identities=19% Similarity=0.083 Sum_probs=53.5
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcE---EEeCCccchhHHHH---HHHhcCC
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADY---VVDHTIRELDRFAN---QILSYGS 179 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~---vId~~~~~~~d~~~---~i~~~~~ 179 (655)
.|.+|+|+|++|+||..+++.....|++|+.++++.++.+.+ +..|.+. ..|.++. ++..+ .+.+..+
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~--~~i~~~~~~~~~~~~ 87 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSE--QELSALADFALSKLG 87 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCH--HHHHHHHHHHHHHcC
Confidence 588999999999999999987778899999998887665443 2334322 1344442 22322 2333234
Q ss_pred CeeEEEeCCCc
Q psy14589 180 ELDADHPGFTD 190 (655)
Q Consensus 180 gvDvV~D~vG~ 190 (655)
++|+++.+.|.
T Consensus 88 ~~d~li~~ag~ 98 (255)
T PRK06113 88 KVDILVNNAGG 98 (255)
T ss_pred CCCEEEECCCC
Confidence 78999998874
No 362
>PRK05650 short chain dehydrogenase; Provisional
Probab=95.81 E-value=0.053 Score=55.96 Aligned_cols=78 Identities=18% Similarity=0.031 Sum_probs=51.7
Q ss_pred EEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcEE---EeCCccc-hhHHHHHHHhcCCCeeEE
Q psy14589 113 TLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADYV---VDHTIRE-LDRFANQILSYGSELDAD 184 (655)
Q Consensus 113 ~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~v---Id~~~~~-~~d~~~~i~~~~~gvDvV 184 (655)
+|+|+||+|+||...++.....|++|+++++++++.+.+ ++.|.+.. .|..+.. .+++.+.+.+..+++|++
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~l 81 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDVI 81 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 699999999999998887777899999999988765543 23343322 2333321 112233333333479999
Q ss_pred EeCCCc
Q psy14589 185 HPGFTD 190 (655)
Q Consensus 185 ~D~vG~ 190 (655)
+.++|.
T Consensus 82 I~~ag~ 87 (270)
T PRK05650 82 VNNAGV 87 (270)
T ss_pred EECCCC
Confidence 999885
No 363
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=95.80 E-value=0.04 Score=55.67 Aligned_cols=98 Identities=19% Similarity=0.092 Sum_probs=63.9
Q ss_pred CCCCCCCCCEEEEEcCCCchHHHHHHHHHHcC--CeEEEEecChHHHHHHH----hCCCcEEEeCCccchhHHHHHHHhc
Q psy14589 104 KPLYTPEPDTLFIIGANRGNGLAAIQVGKAYG--LTVFASVGCPVGVAKAY----GLGADYVVDHTIRELDRFANQILSY 177 (655)
Q Consensus 104 ~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~G--a~Viat~~s~~k~~~a~----~LGAd~vId~~~~~~~d~~~~i~~~ 177 (655)
...+ ++|++||-.|+ |.|..+..+++..+ .+|++++.+++-.+.++ +.|.+.+ ..... |..... ..
T Consensus 71 ~l~~-~~g~~VLdIG~--GsG~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v-~~~~g---d~~~~~-~~ 142 (212)
T PRK13942 71 LLDL-KEGMKVLEIGT--GSGYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNV-EVIVG---DGTLGY-EE 142 (212)
T ss_pred HcCC-CCcCEEEEECC--cccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCe-EEEEC---CcccCC-Cc
Confidence 3456 79999999997 66778888888875 58999999988776664 3554332 11111 110000 01
Q ss_pred CCCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEE
Q psy14589 178 GSELDADHPGFTDP-VYRARRKYFADLAFNYKHFFF 212 (655)
Q Consensus 178 ~~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v 212 (655)
.+.+|+|+-+.... . .+..++.|++||++++.
T Consensus 143 ~~~fD~I~~~~~~~~~---~~~l~~~LkpgG~lvi~ 175 (212)
T PRK13942 143 NAPYDRIYVTAAGPDI---PKPLIEQLKDGGIMVIP 175 (212)
T ss_pred CCCcCEEEECCCcccc---hHHHHHhhCCCcEEEEE
Confidence 23699987544333 4 56788899999998875
No 364
>PRK09135 pteridine reductase; Provisional
Probab=95.78 E-value=0.055 Score=54.50 Aligned_cols=79 Identities=18% Similarity=0.077 Sum_probs=50.0
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh-HHHHHH----HhCCCc---E-EEeCCccchhHHHHH---HHhc
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCP-VGVAKA----YGLGAD---Y-VVDHTIRELDRFANQ---ILSY 177 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~-~k~~~a----~~LGAd---~-vId~~~~~~~d~~~~---i~~~ 177 (655)
.+.+|+|+||+|++|..+++.....|++|++++++. ++.+.+ ...+.. . ..|.++. +++.+. +.+.
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~--~~~~~~~~~~~~~ 82 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDP--DALPELVAACVAA 82 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCH--HHHHHHHHHHHHH
Confidence 568899999999999988887777899999998753 333322 222211 1 1344432 122222 2222
Q ss_pred CCCeeEEEeCCCc
Q psy14589 178 GSELDADHPGFTD 190 (655)
Q Consensus 178 ~~gvDvV~D~vG~ 190 (655)
.+++|+|+.++|.
T Consensus 83 ~~~~d~vi~~ag~ 95 (249)
T PRK09135 83 FGRLDALVNNASS 95 (249)
T ss_pred cCCCCEEEECCCC
Confidence 3478999999874
No 365
>KOG1209|consensus
Probab=95.78 E-value=0.11 Score=52.44 Aligned_cols=104 Identities=17% Similarity=0.157 Sum_probs=70.4
Q ss_pred CCCEEEEEcC-CCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hCCCc-EEEeCCccc-hhHHHHHHHhcC-CCeeEE
Q psy14589 110 EPDTLFIIGA-NRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GLGAD-YVVDHTIRE-LDRFANQILSYG-SELDAD 184 (655)
Q Consensus 110 ~Gd~VLI~Ga-sGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~LGAd-~vId~~~~~-~~d~~~~i~~~~-~gvDvV 184 (655)
....|||+|+ +||||.++..--...|+.|++++|+-+..+.+. +.|.- .-+|.+++. ...+..++++.. +..|+.
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L 85 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLL 85 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEEE
Confidence 4567999886 689999887766677999999999988877665 66632 225555431 123445556543 479999
Q ss_pred EeCCCcc--------hHHHHHHHHH----------------HhccccceEEEe
Q psy14589 185 HPGFTDP--------VYRARRKYFA----------------DLAFNYKHFFFF 213 (655)
Q Consensus 185 ~D~vG~~--------~~~~l~~~l~----------------~l~~gGrlv~v~ 213 (655)
++..|.+ ++++.+++++ +.+..|++|-+|
T Consensus 86 ~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvg 138 (289)
T KOG1209|consen 86 YNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVG 138 (289)
T ss_pred EcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEec
Confidence 9988865 2233444432 357789999987
No 366
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=95.78 E-value=0.065 Score=53.76 Aligned_cols=79 Identities=19% Similarity=0.126 Sum_probs=50.3
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHH-HHH----HHhCCCcEE-E--eCCccchhHHHH---HHHhcC
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVG-VAK----AYGLGADYV-V--DHTIRELDRFAN---QILSYG 178 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k-~~~----a~~LGAd~v-I--d~~~~~~~d~~~---~i~~~~ 178 (655)
.+.+|+|+|++|++|..++......|++|+++.+++.+ .+. +++.+.... + |..+. +++.+ .+.+.-
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~--~~~~~~~~~~~~~~ 81 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDA--ESVERAVDEAKAEF 81 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCH--HHHHHHHHHHHHHc
Confidence 56789999999999999999888889999777665542 222 223343322 2 44332 22322 222222
Q ss_pred CCeeEEEeCCCc
Q psy14589 179 SELDADHPGFTD 190 (655)
Q Consensus 179 ~gvDvV~D~vG~ 190 (655)
+++|+++.++|.
T Consensus 82 ~~id~vi~~ag~ 93 (248)
T PRK05557 82 GGVDILVNNAGI 93 (248)
T ss_pred CCCCEEEECCCc
Confidence 378999998875
No 367
>PRK05855 short chain dehydrogenase; Validated
Probab=95.77 E-value=0.046 Score=62.38 Aligned_cols=81 Identities=19% Similarity=0.087 Sum_probs=55.6
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcE-E--EeCCccc-hhHHHHHHHhcCCCe
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADY-V--VDHTIRE-LDRFANQILSYGSEL 181 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~-v--Id~~~~~-~~d~~~~i~~~~~gv 181 (655)
.+.+++|+||+||||...++-....|++|+.+++++++.+.+ ++.|... + .|.++.. ...+.+.+.+..+++
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i 393 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVP 393 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 567999999999999988887778899999999988776543 3345422 1 3444421 112333343334579
Q ss_pred eEEEeCCCc
Q psy14589 182 DADHPGFTD 190 (655)
Q Consensus 182 DvV~D~vG~ 190 (655)
|+++.++|.
T Consensus 394 d~lv~~Ag~ 402 (582)
T PRK05855 394 DIVVNNAGI 402 (582)
T ss_pred cEEEECCcc
Confidence 999999875
No 368
>PRK05599 hypothetical protein; Provisional
Probab=95.76 E-value=0.052 Score=55.50 Aligned_cols=77 Identities=16% Similarity=0.113 Sum_probs=51.0
Q ss_pred EEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcE--E--EeCCccc-hhHHHHHHHhcCCCeeE
Q psy14589 113 TLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADY--V--VDHTIRE-LDRFANQILSYGSELDA 183 (655)
Q Consensus 113 ~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~--v--Id~~~~~-~~d~~~~i~~~~~gvDv 183 (655)
+++|+||++|+|...++... .|++|+.+++++++.+.+ ++.|.+. + .|..+.. .+++.+.+.+..+++|+
T Consensus 2 ~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~ 80 (246)
T PRK05599 2 SILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEISL 80 (246)
T ss_pred eEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCCE
Confidence 68999999999998877554 499999999988776554 3345432 2 3444321 12333444444457999
Q ss_pred EEeCCCc
Q psy14589 184 DHPGFTD 190 (655)
Q Consensus 184 V~D~vG~ 190 (655)
++.+.|.
T Consensus 81 lv~nag~ 87 (246)
T PRK05599 81 AVVAFGI 87 (246)
T ss_pred EEEecCc
Confidence 9988875
No 369
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=95.73 E-value=0.064 Score=59.07 Aligned_cols=89 Identities=18% Similarity=0.126 Sum_probs=55.8
Q ss_pred cCCCCCCCCCEEEEEcCCCchHHH--HHHHHHHcCCeEEEEecChH--H--------------HHHHHhCCCcE-EE--e
Q psy14589 103 SKPLYTPEPDTLFIIGANRGNGLA--AIQVGKAYGLTVFASVGCPV--G--------------VAKAYGLGADY-VV--D 161 (655)
Q Consensus 103 ~~~~l~~~Gd~VLI~GasGgVG~~--avQlAk~~Ga~Viat~~s~~--k--------------~~~a~~LGAd~-vI--d 161 (655)
..+.+...|+++||+|+|+|+|++ .++.. ..||+|++++...+ + .+.+++.|... .+ |
T Consensus 33 ~~~~~~~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~D 111 (398)
T PRK13656 33 AQGPIANGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGD 111 (398)
T ss_pred hcCCcCCCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcC
Confidence 344443457899999999999999 45555 78999888763221 1 22345667542 22 4
Q ss_pred CCccc-hhHHHHHHHhcCCCeeEEEeCCCcch
Q psy14589 162 HTIRE-LDRFANQILSYGSELDADHPGFTDPV 192 (655)
Q Consensus 162 ~~~~~-~~d~~~~i~~~~~gvDvV~D~vG~~~ 192 (655)
..+.. .+.+.+.+.+.-+++|+++.++|.+.
T Consensus 112 Vss~E~v~~lie~I~e~~G~IDiLVnSaA~~~ 143 (398)
T PRK13656 112 AFSDEIKQKVIELIKQDLGQVDLVVYSLASPR 143 (398)
T ss_pred CCCHHHHHHHHHHHHHhcCCCCEEEECCccCC
Confidence 44321 12344455554458999999998773
No 370
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.73 E-value=0.049 Score=56.11 Aligned_cols=81 Identities=16% Similarity=0.110 Sum_probs=52.3
Q ss_pred CCCEEEEEcC--CCchHHHHHHHHHHcCCeEEEEecCh--HHHHHH-HhCCCc---EEEeCCccc-hhHHHHHHHhcCCC
Q psy14589 110 EPDTLFIIGA--NRGNGLAAIQVGKAYGLTVFASVGCP--VGVAKA-YGLGAD---YVVDHTIRE-LDRFANQILSYGSE 180 (655)
Q Consensus 110 ~Gd~VLI~Ga--sGgVG~~avQlAk~~Ga~Viat~~s~--~k~~~a-~~LGAd---~vId~~~~~-~~d~~~~i~~~~~g 180 (655)
.|++++|+|+ ++|||..+++.....|++|+.+++++ +..+.+ .+++.. ...|..+.. .+++.+.+.+..++
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~ 85 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVDG 85 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 6789999999 89999999887777899999987653 333333 344431 113444321 12333444443457
Q ss_pred eeEEEeCCCc
Q psy14589 181 LDADHPGFTD 190 (655)
Q Consensus 181 vDvV~D~vG~ 190 (655)
+|+++.++|.
T Consensus 86 iD~li~nAG~ 95 (256)
T PRK07889 86 LDGVVHSIGF 95 (256)
T ss_pred CcEEEEcccc
Confidence 9999998874
No 371
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=95.71 E-value=0.047 Score=56.29 Aligned_cols=81 Identities=12% Similarity=-0.059 Sum_probs=50.0
Q ss_pred CCCEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecC------hHHHHHHHhCCCc-EE--EeCCccc-hhHHHHHHHhc
Q psy14589 110 EPDTLFIIGAN--RGNGLAAIQVGKAYGLTVFASVGC------PVGVAKAYGLGAD-YV--VDHTIRE-LDRFANQILSY 177 (655)
Q Consensus 110 ~Gd~VLI~Gas--GgVG~~avQlAk~~Ga~Viat~~s------~~k~~~a~~LGAd-~v--Id~~~~~-~~d~~~~i~~~ 177 (655)
.|++++|+||+ +|||..+++.....|++|+.+.++ ++..+.+.+.+.. .+ .|.++.. ...+.+.+.+.
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 84 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK 84 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence 58899999986 799999988777789999877543 2233333332221 12 3444321 12233344443
Q ss_pred CCCeeEEEeCCCc
Q psy14589 178 GSELDADHPGFTD 190 (655)
Q Consensus 178 ~~gvDvV~D~vG~ 190 (655)
.+++|+++.++|.
T Consensus 85 ~g~iD~lv~nag~ 97 (258)
T PRK07370 85 WGKLDILVHCLAF 97 (258)
T ss_pred cCCCCEEEEcccc
Confidence 4579999998874
No 372
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=95.70 E-value=0.073 Score=55.11 Aligned_cols=90 Identities=18% Similarity=0.072 Sum_probs=61.4
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHh----CCCcEEEeCCccchhHHHHHHHhcCCCeeE
Q psy14589 109 PEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYG----LGADYVVDHTIRELDRFANQILSYGSELDA 183 (655)
Q Consensus 109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~----LGAd~vId~~~~~~~d~~~~i~~~~~gvDv 183 (655)
.+|++|+-.|+ |. |.+++.+++ .|+ +|++++.++...+.+++ .|....+..... ...+|+
T Consensus 118 ~~~~~VLDiGc-Gs-G~l~i~~~~-~g~~~v~giDis~~~l~~A~~n~~~~~~~~~~~~~~~------------~~~fD~ 182 (250)
T PRK00517 118 LPGKTVLDVGC-GS-GILAIAAAK-LGAKKVLAVDIDPQAVEAARENAELNGVELNVYLPQG------------DLKADV 182 (250)
T ss_pred CCCCEEEEeCC-cH-HHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEccC------------CCCcCE
Confidence 58999999998 44 777776555 677 59999999988877654 233111111110 004899
Q ss_pred EEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589 184 DHPGFTDP-VYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 184 V~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
|+-..... ....+..+.+.|++||++++.+
T Consensus 183 Vvani~~~~~~~l~~~~~~~LkpgG~lilsg 213 (250)
T PRK00517 183 IVANILANPLLELAPDLARLLKPGGRLILSG 213 (250)
T ss_pred EEEcCcHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 98766554 2234678888999999999876
No 373
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=95.70 E-value=0.034 Score=56.47 Aligned_cols=99 Identities=15% Similarity=0.065 Sum_probs=62.9
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH-HhCCCcEEE--------------eCCccchhHHHHH
Q psy14589 109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA-YGLGADYVV--------------DHTIRELDRFANQ 173 (655)
Q Consensus 109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a-~~LGAd~vI--------------d~~~~~~~d~~~~ 173 (655)
++|.+||+.|+ |.|.-++-+|+ +|.+|++++.|+.-++.+ ++.|..... +.... |+.+.
T Consensus 33 ~~~~rvLd~GC--G~G~da~~LA~-~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~---D~~~~ 106 (213)
T TIGR03840 33 PAGARVFVPLC--GKSLDLAWLAE-QGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCG---DFFAL 106 (213)
T ss_pred CCCCeEEEeCC--CchhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEc---cCCCC
Confidence 46779999998 78888888885 699999999999888775 333332111 00000 11110
Q ss_pred HHhcCCCeeEEEeCCCc-----c-hHHHHHHHHHHhccccceEEEe
Q psy14589 174 ILSYGSELDADHPGFTD-----P-VYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 174 i~~~~~gvDvV~D~vG~-----~-~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
-....+.+|.|+|...- + .-+-++...++|++||++++++
T Consensus 107 ~~~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~ 152 (213)
T TIGR03840 107 TAADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLIT 152 (213)
T ss_pred CcccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEE
Confidence 00112358999996531 1 1122678888999999988876
No 374
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=95.69 E-value=0.028 Score=56.94 Aligned_cols=96 Identities=19% Similarity=0.093 Sum_probs=61.9
Q ss_pred CCCCCCCEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecChHHHHHH----HhCCCcEE-EeCCccchhHHHHHHHhcC
Q psy14589 106 LYTPEPDTLFIIGANRGNGLAAIQVGKAYGL--TVFASVGCPVGVAKA----YGLGADYV-VDHTIRELDRFANQILSYG 178 (655)
Q Consensus 106 ~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga--~Viat~~s~~k~~~a----~~LGAd~v-Id~~~~~~~d~~~~i~~~~ 178 (655)
.+ ++|++||-.|+ |.|..++-+|+..|. +|+++++.++-.+.+ ..+|.+.| +...+. ..-..+ .
T Consensus 69 ~l-~pg~~VLeIGt--GsGY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg-----~~g~~~-~ 139 (209)
T PF01135_consen 69 DL-KPGDRVLEIGT--GSGYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDG-----SEGWPE-E 139 (209)
T ss_dssp TC--TT-EEEEES---TTSHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-G-----GGTTGG-G
T ss_pred hc-CCCCEEEEecC--CCcHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcch-----hhcccc-C
Confidence 46 89999999996 566677778888775 699999888655555 34566543 222221 111111 1
Q ss_pred CCeeEEEeCCCcchHHHHHHHHHHhccccceEEE
Q psy14589 179 SELDADHPGFTDPVYRARRKYFADLAFNYKHFFF 212 (655)
Q Consensus 179 ~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v 212 (655)
..+|.|+-+.+.+. .-...++.|++|||+|..
T Consensus 140 apfD~I~v~~a~~~--ip~~l~~qL~~gGrLV~p 171 (209)
T PF01135_consen 140 APFDRIIVTAAVPE--IPEALLEQLKPGGRLVAP 171 (209)
T ss_dssp -SEEEEEESSBBSS----HHHHHTEEEEEEEEEE
T ss_pred CCcCEEEEeeccch--HHHHHHHhcCCCcEEEEE
Confidence 27999998877763 146788899999999985
No 375
>PRK09134 short chain dehydrogenase; Provisional
Probab=95.68 E-value=0.068 Score=54.73 Aligned_cols=81 Identities=15% Similarity=0.037 Sum_probs=50.9
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecC-hHHHHHH----HhCCCcE---EEeCCccc-hhHHHHHHHhcCCC
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGC-PVGVAKA----YGLGADY---VVDHTIRE-LDRFANQILSYGSE 180 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s-~~k~~~a----~~LGAd~---vId~~~~~-~~d~~~~i~~~~~g 180 (655)
.+.+++|+||+|+||..+++.....|++|+++++. .++.+.+ +..|... ..|.++.. ..++.+.+.+..++
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~ 87 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALGP 87 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 57789999999999999988887889999877653 3333322 2334421 13444321 11222333333347
Q ss_pred eeEEEeCCCc
Q psy14589 181 LDADHPGFTD 190 (655)
Q Consensus 181 vDvV~D~vG~ 190 (655)
+|+++.+.|.
T Consensus 88 iD~vi~~ag~ 97 (258)
T PRK09134 88 ITLLVNNASL 97 (258)
T ss_pred CCEEEECCcC
Confidence 9999999874
No 376
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=95.68 E-value=0.064 Score=55.13 Aligned_cols=80 Identities=18% Similarity=0.083 Sum_probs=50.2
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEec-ChHHHHHH----H-hCCCc-EE--EeCCccc-hhHHHHHHHhcCC
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVG-CPVGVAKA----Y-GLGAD-YV--VDHTIRE-LDRFANQILSYGS 179 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~-s~~k~~~a----~-~LGAd-~v--Id~~~~~-~~d~~~~i~~~~~ 179 (655)
+|++++|+||++|||..+++.....|++|+.+.+ ++++.+.+ + ..|.. .. +|.++.. .+.+.+.+.+..+
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 86 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFD 86 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 6889999999999999999877788999987754 34443322 1 12432 12 3444321 1123333333334
Q ss_pred CeeEEEeCCC
Q psy14589 180 ELDADHPGFT 189 (655)
Q Consensus 180 gvDvV~D~vG 189 (655)
++|+++.+.|
T Consensus 87 ~id~lv~nAg 96 (260)
T PRK08416 87 RVDFFISNAI 96 (260)
T ss_pred CccEEEECcc
Confidence 7899998876
No 377
>PRK04148 hypothetical protein; Provisional
Probab=95.66 E-value=0.039 Score=52.02 Aligned_cols=97 Identities=15% Similarity=0.077 Sum_probs=62.3
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCcc----------------chhHHHH
Q psy14589 109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIR----------------ELDRFAN 172 (655)
Q Consensus 109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~----------------~~~d~~~ 172 (655)
.++.+|++.|. | .|...++..+.+|.+|+++|.+++..+.+++.|.+.+.+.--. +..++..
T Consensus 15 ~~~~kileIG~-G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~~~~~v~dDlf~p~~~~y~~a~liysirpp~el~~ 92 (134)
T PRK04148 15 GKNKKIVELGI-G-FYFKVAKKLKESGFDVIVIDINEKAVEKAKKLGLNAFVDDLFNPNLEIYKNAKLIYSIRPPRDLQP 92 (134)
T ss_pred ccCCEEEEEEe-c-CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHhCCeEEECcCCCCCHHHHhcCCEEEEeCCCHHHHH
Confidence 35788999999 6 7764444444679999999999999998888776555431110 0113444
Q ss_pred HHHhcCC--CeeEEEeCCCcchHHHHHHHHHHhccccceE
Q psy14589 173 QILSYGS--ELDADHPGFTDPVYRARRKYFADLAFNYKHF 210 (655)
Q Consensus 173 ~i~~~~~--gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv 210 (655)
.+.+... ++|+++-..+++. ....+++...+|..+
T Consensus 93 ~~~~la~~~~~~~~i~~l~~e~---~~~~~kl~ny~~~~~ 129 (134)
T PRK04148 93 FILELAKKINVPLIIKPLSGEE---PIKELKLINYKGKPI 129 (134)
T ss_pred HHHHHHHHcCCCEEEEcCCCCC---CCcceEEEecCCeEE
Confidence 4444432 6788887777775 445555555555433
No 378
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=95.64 E-value=0.094 Score=51.67 Aligned_cols=99 Identities=18% Similarity=-0.003 Sum_probs=59.7
Q ss_pred CCCCCCCCEEEEEcCCCchHHHHHHHHHHc-C-CeEEEEecChHHHHHHHhCCCcEE-EeCCccchhHHHHHHHhc--CC
Q psy14589 105 PLYTPEPDTLFIIGANRGNGLAAIQVGKAY-G-LTVFASVGCPVGVAKAYGLGADYV-VDHTIRELDRFANQILSY--GS 179 (655)
Q Consensus 105 ~~l~~~Gd~VLI~GasGgVG~~avQlAk~~-G-a~Viat~~s~~k~~~a~~LGAd~v-Id~~~~~~~d~~~~i~~~--~~ 179 (655)
..+ ++|++||..|+ |.-| ++..+++.. + .+|++++.++.. ...+++.+ .|..+. +..+.+.+. .+
T Consensus 28 ~~i-~~g~~VLDiG~-GtG~-~~~~l~~~~~~~~~v~~vDis~~~----~~~~i~~~~~d~~~~---~~~~~l~~~~~~~ 97 (188)
T TIGR00438 28 KLI-KPGDTVLDLGA-APGG-WSQVAVEQVGGKGRVIAVDLQPMK----PIENVDFIRGDFTDE---EVLNKIRERVGDD 97 (188)
T ss_pred ccc-CCCCEEEEecC-CCCH-HHHHHHHHhCCCceEEEEeccccc----cCCCceEEEeeCCCh---hHHHHHHHHhCCC
Confidence 445 78999999998 4444 445555544 3 489999998754 22344322 233321 233344433 23
Q ss_pred CeeEEEe-C----CCcch----------HHHHHHHHHHhccccceEEEe
Q psy14589 180 ELDADHP-G----FTDPV----------YRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 180 gvDvV~D-~----vG~~~----------~~~l~~~l~~l~~gGrlv~v~ 213 (655)
++|+|+. . .|... .+.+..+.++|++||++++..
T Consensus 98 ~~D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~ 146 (188)
T TIGR00438 98 KVDVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKV 146 (188)
T ss_pred CccEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence 7999995 2 22210 234778899999999998854
No 379
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.62 E-value=0.063 Score=56.00 Aligned_cols=81 Identities=17% Similarity=0.064 Sum_probs=52.5
Q ss_pred CCCEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecCh---HHHHHH-HhCCCcEE--EeCCccc-hhHHHHHHHhcCCC
Q psy14589 110 EPDTLFIIGAN--RGNGLAAIQVGKAYGLTVFASVGCP---VGVAKA-YGLGADYV--VDHTIRE-LDRFANQILSYGSE 180 (655)
Q Consensus 110 ~Gd~VLI~Gas--GgVG~~avQlAk~~Ga~Viat~~s~---~k~~~a-~~LGAd~v--Id~~~~~-~~d~~~~i~~~~~g 180 (655)
.|++++|+||+ +|||..+++.....|++|+.+.+++ ++.+.+ .++|.... .|-.+.. .+.+.+.+.+..++
T Consensus 9 ~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 88 (272)
T PRK08159 9 AGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKWGK 88 (272)
T ss_pred cCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhcCC
Confidence 67899999996 7999998888778899998887653 333333 34564222 3443321 12233344433357
Q ss_pred eeEEEeCCCc
Q psy14589 181 LDADHPGFTD 190 (655)
Q Consensus 181 vDvV~D~vG~ 190 (655)
+|+++.++|.
T Consensus 89 iD~lv~nAG~ 98 (272)
T PRK08159 89 LDFVVHAIGF 98 (272)
T ss_pred CcEEEECCcc
Confidence 9999998874
No 380
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.62 E-value=0.053 Score=56.31 Aligned_cols=81 Identities=14% Similarity=0.075 Sum_probs=49.8
Q ss_pred CCCEEEEEcCCC--chHHHHHHHHHHcCCeEEEEecCh---HHHHHHH-hCCCcEE--EeCCccc-hhHHHHHHHhcCCC
Q psy14589 110 EPDTLFIIGANR--GNGLAAIQVGKAYGLTVFASVGCP---VGVAKAY-GLGADYV--VDHTIRE-LDRFANQILSYGSE 180 (655)
Q Consensus 110 ~Gd~VLI~GasG--gVG~~avQlAk~~Ga~Viat~~s~---~k~~~a~-~LGAd~v--Id~~~~~-~~d~~~~i~~~~~g 180 (655)
.|.+++|+||++ |||.++++.....|++|+.+++++ +..+.+. +.+...+ .|-.+.. .+.+.+.+.+..+.
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 84 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPK 84 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCC
Confidence 578999999975 999988877777899998887763 2222222 2232222 3444421 11233333333347
Q ss_pred eeEEEeCCCc
Q psy14589 181 LDADHPGFTD 190 (655)
Q Consensus 181 vDvV~D~vG~ 190 (655)
+|+++.++|.
T Consensus 85 iD~linnAg~ 94 (262)
T PRK07984 85 FDGFVHSIGF 94 (262)
T ss_pred CCEEEECCcc
Confidence 9999999874
No 381
>cd04888 ACT_PheB-BS C-terminal ACT domain of a small (~147 a.a.) putative phenylalanine biosynthetic pathway protein described in Bacillus subtilis (BS) PheB (PheB-BS) and related domains. This CD includes the C-terminal ACT domain of a small (~147 a.a.) putative phenylalanine biosynthetic pathway protein described in Bacillus subtilis (BS) PheB (PheB-BS) and other related ACT domains. In B. subtilis, the upstream gene of pheB, pheA encodes prephenate dehydratase (PDT). The presumed product of the pheB gene is chorismate mutase (CM). The deduced product of the B. subtilis pheB gene, however, has no significant homology to the CM portion of the bifunctional CM-PDT of Escherichia coli. The presence of an ACT domain lends support to the prediction that these proteins function as a phenylalanine-binding regulatory protein. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=95.56 E-value=0.072 Score=44.08 Aligned_cols=72 Identities=18% Similarity=0.298 Sum_probs=51.2
Q ss_pred EEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecC-CchHHHHHHHHHccC--CcEEEec
Q psy14589 263 FVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAP-GGDLSSVIESLRSSC--SYINIIS 335 (655)
Q Consensus 263 sl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg-~~~v~~~l~~L~~~~--~~v~iLG 335 (655)
++.+...+ ++|.|+++++.+++.++|+..+.+...........|-++... +..+.++++.|++.- ..++++|
T Consensus 2 ~l~i~~~d-~~g~l~~I~~~la~~~inI~~i~~~~~~~~~~~i~~~v~v~~~~~~l~~l~~~L~~i~~V~~v~~~~ 76 (76)
T cd04888 2 TLSLLLEH-RPGVLSKVLNTIAQVRGNVLTINQNIPIHGRANVTISIDTSTMNGDIDELLEELREIDGVEKVELVG 76 (76)
T ss_pred EEEEEecC-CCchHHHHHHHHHHcCCCEEEEEeCCCCCCeEEEEEEEEcCchHHHHHHHHHHHhcCCCeEEEEEeC
Confidence 45666777 899999999999999999999976432222344555555555 448899999998774 3454443
No 382
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.56 E-value=0.045 Score=55.05 Aligned_cols=79 Identities=18% Similarity=0.096 Sum_probs=51.1
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEE-ecChHHHHHHH----hCCCcE-E--EeCCccchhHHHH---HHHhcC
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFAS-VGCPVGVAKAY----GLGADY-V--VDHTIRELDRFAN---QILSYG 178 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat-~~s~~k~~~a~----~LGAd~-v--Id~~~~~~~d~~~---~i~~~~ 178 (655)
.+.+++|+||+|++|...+......|++|+.+ ++++++.+.+. ..+... + .|..+. +++.+ .+.+..
T Consensus 4 ~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~ 81 (247)
T PRK05565 4 MGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSE--EDVENLVEQIVEKF 81 (247)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCH--HHHHHHHHHHHHHh
Confidence 46789999999999999888777789999888 88776654432 223221 1 233332 22322 222222
Q ss_pred CCeeEEEeCCCc
Q psy14589 179 SELDADHPGFTD 190 (655)
Q Consensus 179 ~gvDvV~D~vG~ 190 (655)
+++|+|+.+.|.
T Consensus 82 ~~id~vi~~ag~ 93 (247)
T PRK05565 82 GKIDILVNNAGI 93 (247)
T ss_pred CCCCEEEECCCc
Confidence 379999998875
No 383
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=95.55 E-value=0.053 Score=54.47 Aligned_cols=79 Identities=20% Similarity=0.057 Sum_probs=49.0
Q ss_pred CEEEEEcCCCchHHHHHHHHHHcCCeEEEEec-ChHHHHHH----HhCCCc-EE--EeCCccc-hhHHHHHHHhcCCCee
Q psy14589 112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVG-CPVGVAKA----YGLGAD-YV--VDHTIRE-LDRFANQILSYGSELD 182 (655)
Q Consensus 112 d~VLI~GasGgVG~~avQlAk~~Ga~Viat~~-s~~k~~~a----~~LGAd-~v--Id~~~~~-~~d~~~~i~~~~~gvD 182 (655)
++++|+|++|++|..+++.....|++|+++.+ ++++.+.. ...+.. .+ .|..+.. .+.+.+.+.+..+.+|
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID 80 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence 46899999999999999888888999988877 44433322 122221 11 3444321 0122233333345789
Q ss_pred EEEeCCCc
Q psy14589 183 ADHPGFTD 190 (655)
Q Consensus 183 vV~D~vG~ 190 (655)
+|+.+.|.
T Consensus 81 ~vi~~ag~ 88 (242)
T TIGR01829 81 VLVNNAGI 88 (242)
T ss_pred EEEECCCC
Confidence 99999874
No 384
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=95.55 E-value=0.059 Score=55.27 Aligned_cols=77 Identities=23% Similarity=0.183 Sum_probs=51.1
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh--CCCcEE-EeCCccchhHHHHHHHhcCCCeeEEEe
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG--LGADYV-VDHTIRELDRFANQILSYGSELDADHP 186 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~--LGAd~v-Id~~~~~~~d~~~~i~~~~~gvDvV~D 186 (655)
.+.+|+|+||+|.+|..+++.+...|.+|+++++++++...... .++..+ .|..+. .+++.+.+ ..++|+|+.
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~-~~~l~~~~---~~~~d~vi~ 91 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEG-SDKLVEAI---GDDSDAVIC 91 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCC-HHHHHHHh---hcCCCEEEE
Confidence 56799999999999999998877789999999888776543322 123322 243331 01222222 136899998
Q ss_pred CCCc
Q psy14589 187 GFTD 190 (655)
Q Consensus 187 ~vG~ 190 (655)
+.|.
T Consensus 92 ~~g~ 95 (251)
T PLN00141 92 ATGF 95 (251)
T ss_pred CCCC
Confidence 8764
No 385
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.54 E-value=0.078 Score=56.26 Aligned_cols=81 Identities=20% Similarity=0.131 Sum_probs=51.7
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh-HHHH----HHHhCCCcEEE---eCCccc-hhHHHHHHHhcCCC
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCP-VGVA----KAYGLGADYVV---DHTIRE-LDRFANQILSYGSE 180 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~-~k~~----~a~~LGAd~vI---d~~~~~-~~d~~~~i~~~~~g 180 (655)
+|.+++|+||+||||...++.....|++|+..+++. ++.+ .+++.|..... |..+.. ...+.+.+.+ .++
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~-~g~ 89 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVG-LGG 89 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH-hCC
Confidence 688999999999999998887777899998887643 2322 23344543222 333321 1123333334 357
Q ss_pred eeEEEeCCCcc
Q psy14589 181 LDADHPGFTDP 191 (655)
Q Consensus 181 vDvV~D~vG~~ 191 (655)
+|+++.++|..
T Consensus 90 iD~li~nAG~~ 100 (306)
T PRK07792 90 LDIVVNNAGIT 100 (306)
T ss_pred CCEEEECCCCC
Confidence 99999988753
No 386
>PRK07069 short chain dehydrogenase; Validated
Probab=95.52 E-value=0.065 Score=54.22 Aligned_cols=79 Identities=22% Similarity=0.103 Sum_probs=50.0
Q ss_pred EEEEEcCCCchHHHHHHHHHHcCCeEEEEecC-hHHHHHHH----hC-CCcE----EEeCCccc-hhHHHHHHHhcCCCe
Q psy14589 113 TLFIIGANRGNGLAAIQVGKAYGLTVFASVGC-PVGVAKAY----GL-GADY----VVDHTIRE-LDRFANQILSYGSEL 181 (655)
Q Consensus 113 ~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s-~~k~~~a~----~L-GAd~----vId~~~~~-~~d~~~~i~~~~~gv 181 (655)
+++|+|++|+||...++.....|++|++++++ +++.+.+. +. +... ..|..+.. ...+.+.+.+..+++
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 80 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL 80 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 38999999999999988877789999999887 55444332 21 2221 23544431 112223333333478
Q ss_pred eEEEeCCCcc
Q psy14589 182 DADHPGFTDP 191 (655)
Q Consensus 182 DvV~D~vG~~ 191 (655)
|+++.++|..
T Consensus 81 d~vi~~ag~~ 90 (251)
T PRK07069 81 SVLVNNAGVG 90 (251)
T ss_pred cEEEECCCcC
Confidence 9999988743
No 387
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=95.52 E-value=0.059 Score=54.39 Aligned_cols=97 Identities=18% Similarity=0.066 Sum_probs=62.8
Q ss_pred CCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecChHHHHHHH----hCCCcEEEeCCccchhHHHHHHHhcC
Q psy14589 105 PLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL--TVFASVGCPVGVAKAY----GLGADYVVDHTIRELDRFANQILSYG 178 (655)
Q Consensus 105 ~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga--~Viat~~s~~k~~~a~----~LGAd~vId~~~~~~~d~~~~i~~~~ 178 (655)
..+ ++|++||-.|+ |.|..++.+|+..+. +|++++.+++-.+.++ ++|.+.+.- ... |..+... ..
T Consensus 73 l~~-~~~~~VLDiG~--GsG~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~-~~~---d~~~~~~-~~ 144 (215)
T TIGR00080 73 LEL-KPGMKVLEIGT--GSGYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIV-IVG---DGTQGWE-PL 144 (215)
T ss_pred hCC-CCcCEEEEECC--CccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEE-EEC---CcccCCc-cc
Confidence 346 78999998886 667788888887654 6999999988776654 456543311 111 1111111 11
Q ss_pred CCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEE
Q psy14589 179 SELDADHPGFTDP-VYRARRKYFADLAFNYKHFFF 212 (655)
Q Consensus 179 ~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v 212 (655)
..+|+|+-..... . .+...+.|++||+++..
T Consensus 145 ~~fD~Ii~~~~~~~~---~~~~~~~L~~gG~lv~~ 176 (215)
T TIGR00080 145 APYDRIYVTAAGPKI---PEALIDQLKEGGILVMP 176 (215)
T ss_pred CCCCEEEEcCCcccc---cHHHHHhcCcCcEEEEE
Confidence 3699887443333 4 56778899999998875
No 388
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=95.52 E-value=0.053 Score=54.46 Aligned_cols=96 Identities=14% Similarity=-0.059 Sum_probs=63.1
Q ss_pred CCCCCCCCEEEEEcCCCchHHHHHHHHHHcC--CeEEEEecChHHHHHHH----hCCCc---EEEeCCccchhHHHHHHH
Q psy14589 105 PLYTPEPDTLFIIGANRGNGLAAIQVGKAYG--LTVFASVGCPVGVAKAY----GLGAD---YVVDHTIRELDRFANQIL 175 (655)
Q Consensus 105 ~~l~~~Gd~VLI~GasGgVG~~avQlAk~~G--a~Viat~~s~~k~~~a~----~LGAd---~vId~~~~~~~d~~~~i~ 175 (655)
..+ ++|++||-.|+ |.|..+..+++..+ .+|++++.+++-.+.++ +.|.. .++... ..+...
T Consensus 68 l~~-~~~~~VLDiG~--GsG~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d------~~~~~~ 138 (205)
T PRK13944 68 IEP-RPGMKILEVGT--GSGYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGD------GKRGLE 138 (205)
T ss_pred cCC-CCCCEEEEECc--CccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECC------cccCCc
Confidence 355 78999998897 66778888888764 58999999987665554 45543 223211 111111
Q ss_pred hcCCCeeEEEeCCCcchHHHHHHHHHHhccccceEEE
Q psy14589 176 SYGSELDADHPGFTDPVYRARRKYFADLAFNYKHFFF 212 (655)
Q Consensus 176 ~~~~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v 212 (655)
. .+.+|+|+-+.+... ..+..++.|++||+++..
T Consensus 139 ~-~~~fD~Ii~~~~~~~--~~~~l~~~L~~gG~lvi~ 172 (205)
T PRK13944 139 K-HAPFDAIIVTAAAST--IPSALVRQLKDGGVLVIP 172 (205)
T ss_pred c-CCCccEEEEccCcch--hhHHHHHhcCcCcEEEEE
Confidence 1 136999886655442 146778899999998764
No 389
>PRK07577 short chain dehydrogenase; Provisional
Probab=95.45 E-value=0.048 Score=54.66 Aligned_cols=74 Identities=18% Similarity=0.186 Sum_probs=49.6
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc-EEEeCCccchhHHHHHHHhc--CCCeeEEEe
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD-YVVDHTIRELDRFANQILSY--GSELDADHP 186 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd-~vId~~~~~~~d~~~~i~~~--~~gvDvV~D 186 (655)
.+.+|+|+||+|++|..+++.....|++|+++++++++ ..... ...|..+. +++.+.+.+. ..++|+++.
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~-----~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~d~vi~ 74 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID-----DFPGELFACDLADI--EQTAATLAQINEIHPVDAIVN 74 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc-----ccCceEEEeeCCCH--HHHHHHHHHHHHhCCCcEEEE
Confidence 46789999999999999998888889999999887654 12221 12344442 1232223222 126899999
Q ss_pred CCCc
Q psy14589 187 GFTD 190 (655)
Q Consensus 187 ~vG~ 190 (655)
+.|.
T Consensus 75 ~ag~ 78 (234)
T PRK07577 75 NVGI 78 (234)
T ss_pred CCCC
Confidence 8875
No 390
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=95.45 E-value=0.098 Score=53.09 Aligned_cols=77 Identities=13% Similarity=0.051 Sum_probs=50.8
Q ss_pred CEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH----HhCCCcE-E--EeCCccchhHHHH---HHHhcCCCe
Q psy14589 112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA----YGLGADY-V--VDHTIRELDRFAN---QILSYGSEL 181 (655)
Q Consensus 112 d~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a----~~LGAd~-v--Id~~~~~~~d~~~---~i~~~~~gv 181 (655)
.+++|+|++|+||..+++.....|++|+.+++++++.+.+ ++.|... + .|..+. +++.+ .+.+..+++
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~--~~i~~~~~~~~~~~~~i 78 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDK--DQVFSAIDQAAEKFGGF 78 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCH--HHHHHHHHHHHHHcCCC
Confidence 3699999999999999988888899999998887654332 3344321 1 243332 22322 233333478
Q ss_pred eEEEeCCCc
Q psy14589 182 DADHPGFTD 190 (655)
Q Consensus 182 DvV~D~vG~ 190 (655)
|+++.+.|.
T Consensus 79 d~vi~~ag~ 87 (254)
T TIGR02415 79 DVMVNNAGV 87 (254)
T ss_pred CEEEECCCc
Confidence 999998875
No 391
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=95.44 E-value=0.055 Score=64.07 Aligned_cols=79 Identities=15% Similarity=0.021 Sum_probs=54.2
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-h----CCCcEE----EeCCccchhHHHHHH---Hhc
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-G----LGADYV----VDHTIRELDRFANQI---LSY 177 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~----LGAd~v----Id~~~~~~~d~~~~i---~~~ 177 (655)
.|++|+|+||+|+||..+++.....|++|++++++.++.+.+. + .|...+ .|.++. +++.+.+ .+.
T Consensus 413 ~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~--~~v~~a~~~i~~~ 490 (676)
T TIGR02632 413 ARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDE--QAVKAAFADVALA 490 (676)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCH--HHHHHHHHHHHHh
Confidence 5789999999999999999877788999999999887665442 1 233222 344432 2333332 222
Q ss_pred CCCeeEEEeCCCc
Q psy14589 178 GSELDADHPGFTD 190 (655)
Q Consensus 178 ~~gvDvV~D~vG~ 190 (655)
.+++|+++.++|.
T Consensus 491 ~g~iDilV~nAG~ 503 (676)
T TIGR02632 491 YGGVDIVVNNAGI 503 (676)
T ss_pred cCCCcEEEECCCC
Confidence 3479999999884
No 392
>PF13710 ACT_5: ACT domain; PDB: 2FGC_A 2PC6_A 2F1F_B.
Probab=95.44 E-value=0.072 Score=43.53 Aligned_cols=61 Identities=10% Similarity=0.243 Sum_probs=51.5
Q ss_pred CCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecC-CchHHHHHHHHHccCCcEE
Q psy14589 271 DEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAP-GGDLSSVIESLRSSCSYIN 332 (655)
Q Consensus 271 d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg-~~~v~~~l~~L~~~~~~v~ 332 (655)
|+||.|.+++.+|..+|+|+..|..-| ...+..+.+-+.+++ +..+..+.+.|++..+-++
T Consensus 1 n~~GvL~Ri~~vf~rRg~nI~sl~v~~-~~~~~~~riti~v~~~~~~i~~l~~Ql~KlidV~~ 62 (63)
T PF13710_consen 1 NQPGVLNRITGVFRRRGFNIESLSVGP-TEDPGISRITIVVSGDDREIEQLVKQLEKLIDVVK 62 (63)
T ss_dssp SSTTHHHHHHHHHHTTT-EECEEEEEE--SSTTEEEEEEEEES-CCHHHHHHHHHHCSTTEEE
T ss_pred CCcHHHHHHHHHHhcCCeEEeeEEeee-cCCCCEEEEEEEEeeCchhHHHHHHHHhccCCeEe
Confidence 379999999999999999999999988 445667889999999 8899999999998876544
No 393
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=95.42 E-value=0.04 Score=56.59 Aligned_cols=78 Identities=15% Similarity=0.108 Sum_probs=50.9
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcE-EEeCCccc-hhHHHHHHHhcCCCeeEEEeC
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADY-VVDHTIRE-LDRFANQILSYGSELDADHPG 187 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~-vId~~~~~-~~d~~~~i~~~~~gvDvV~D~ 187 (655)
.|.+++|+|++|+||..+++.....|++|+.+++++++.+. ..+.. ..|..+.. ..++.+.+.+..+.+|+++.+
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~ 84 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQH---ENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVNN 84 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcccccc---CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 57899999999999999998888889999999887654321 11211 13444321 112223333333478999998
Q ss_pred CCc
Q psy14589 188 FTD 190 (655)
Q Consensus 188 vG~ 190 (655)
.|.
T Consensus 85 Ag~ 87 (266)
T PRK06171 85 AGI 87 (266)
T ss_pred Ccc
Confidence 874
No 394
>PRK08219 short chain dehydrogenase; Provisional
Probab=95.42 E-value=0.097 Score=51.99 Aligned_cols=76 Identities=20% Similarity=0.081 Sum_probs=50.0
Q ss_pred CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh-CCCcEEE--eCCccchhHHHHHHHhcCCCeeEEEeC
Q psy14589 111 PDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG-LGADYVV--DHTIRELDRFANQILSYGSELDADHPG 187 (655)
Q Consensus 111 Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~-LGAd~vI--d~~~~~~~d~~~~i~~~~~gvDvV~D~ 187 (655)
+.+++|+||+|++|...+..+... .+|+++++++++.+.+.+ ...-+++ |..+. +++.+.+.+. +++|+++.+
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~-~~id~vi~~ 78 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDP--EAIAAAVEQL-GRLDVLVHN 78 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCH--HHHHHHHHhc-CCCCEEEEC
Confidence 458999999999999888766556 899999998877655543 2112222 33322 2333333322 268999999
Q ss_pred CCc
Q psy14589 188 FTD 190 (655)
Q Consensus 188 vG~ 190 (655)
+|.
T Consensus 79 ag~ 81 (227)
T PRK08219 79 AGV 81 (227)
T ss_pred CCc
Confidence 875
No 395
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=95.41 E-value=0.065 Score=52.11 Aligned_cols=51 Identities=24% Similarity=0.348 Sum_probs=42.9
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEe
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVD 161 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId 161 (655)
++-+|+|.|+ |.+|.-|+++++.+|++|+..+..+++.+....+++..+..
T Consensus 19 ~p~~vvv~G~-G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~~~~~~~i~~ 69 (168)
T PF01262_consen 19 PPAKVVVTGA-GRVGQGAAEIAKGLGAEVVVPDERPERLRQLESLGAYFIEV 69 (168)
T ss_dssp -T-EEEEEST-SHHHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTTEESEE
T ss_pred CCeEEEEECC-CHHHHHHHHHHhHCCCEEEeccCCHHHHHhhhcccCceEEE
Confidence 4578999998 99999999999999999999999999888888888866543
No 396
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.41 E-value=0.065 Score=55.28 Aligned_cols=81 Identities=15% Similarity=0.080 Sum_probs=50.6
Q ss_pred CCCEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecCh---HHHHHH-HhC-CCc-E--EEeCCccc-hhHHHHHHHhcC
Q psy14589 110 EPDTLFIIGAN--RGNGLAAIQVGKAYGLTVFASVGCP---VGVAKA-YGL-GAD-Y--VVDHTIRE-LDRFANQILSYG 178 (655)
Q Consensus 110 ~Gd~VLI~Gas--GgVG~~avQlAk~~Ga~Viat~~s~---~k~~~a-~~L-GAd-~--vId~~~~~-~~d~~~~i~~~~ 178 (655)
.|++++|+||+ +|||..+++.....|++|+.++++. ++++.+ .++ |.. . ..|..+.. .+.+.+.+.+..
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 85 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEV 85 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhC
Confidence 68899999997 8999998887777899998886542 333333 233 221 1 13444321 122333444333
Q ss_pred CCeeEEEeCCCc
Q psy14589 179 SELDADHPGFTD 190 (655)
Q Consensus 179 ~gvDvV~D~vG~ 190 (655)
+++|+++.++|.
T Consensus 86 g~ld~lv~nag~ 97 (257)
T PRK08594 86 GVIHGVAHCIAF 97 (257)
T ss_pred CCccEEEECccc
Confidence 579999988763
No 397
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.41 E-value=0.09 Score=53.43 Aligned_cols=79 Identities=15% Similarity=0.113 Sum_probs=49.9
Q ss_pred CEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChH-HHH----HHHhCCCc-EE--EeCCccc-hhHHHHHHHhcCCCee
Q psy14589 112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPV-GVA----KAYGLGAD-YV--VDHTIRE-LDRFANQILSYGSELD 182 (655)
Q Consensus 112 d~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~-k~~----~a~~LGAd-~v--Id~~~~~-~~d~~~~i~~~~~gvD 182 (655)
.+|+|+|++|+||..+++.....|++|++++++.. +.+ .+++.+.. .+ .|.++.. ...+.+.+.+..+++|
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 82 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRID 82 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence 57999999999999998887788999999887542 221 22333432 12 3444321 1123334444335789
Q ss_pred EEEeCCCc
Q psy14589 183 ADHPGFTD 190 (655)
Q Consensus 183 vV~D~vG~ 190 (655)
+++.+.|.
T Consensus 83 ~vi~~ag~ 90 (256)
T PRK12745 83 CLVNNAGV 90 (256)
T ss_pred EEEECCcc
Confidence 99998874
No 398
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=95.40 E-value=0.11 Score=53.29 Aligned_cols=81 Identities=15% Similarity=0.022 Sum_probs=51.2
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh-HHHHH----HHhCCCcE---EEeCCccc-hhHHHHHHHhcCCC
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCP-VGVAK----AYGLGADY---VVDHTIRE-LDRFANQILSYGSE 180 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~-~k~~~----a~~LGAd~---vId~~~~~-~~d~~~~i~~~~~g 180 (655)
.|.+++|+||+|+||..+++.....|++|+.+.++. ++.+. +++.|... ..|.++.. ..++.+.+.+..++
T Consensus 6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~ 85 (261)
T PRK08936 6 EGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFGT 85 (261)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 688999999999999999998888999988877643 22222 23344321 23444421 01122223332347
Q ss_pred eeEEEeCCCc
Q psy14589 181 LDADHPGFTD 190 (655)
Q Consensus 181 vDvV~D~vG~ 190 (655)
+|+++.+.|.
T Consensus 86 id~lv~~ag~ 95 (261)
T PRK08936 86 LDVMINNAGI 95 (261)
T ss_pred CCEEEECCCC
Confidence 8999988875
No 399
>cd04882 ACT_Bt0572_2 C-terminal ACT domain of a novel protein composed of just two ACT domains. Included in this CD is the C-terminal ACT domain of a novel protein composed of just two ACT domains, as seen in the yet uncharacterized structure (pdb 2F06) of the Bt0572 protein from Bacteroides thetaiotaomicron and related proteins. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=95.38 E-value=0.081 Score=42.24 Aligned_cols=58 Identities=12% Similarity=0.224 Sum_probs=43.5
Q ss_pred EEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecCCchHHHHHHHHHcc
Q psy14589 265 IFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGGDLSSVIESLRSS 327 (655)
Q Consensus 265 ~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg~~~v~~~l~~L~~~ 327 (655)
.+.+++ +||.|+++++.++++++|+..+...+... .+...+.+.++. ..++++.|++.
T Consensus 3 ~v~~~d-~pG~L~~i~~~l~~~~~nI~~i~~~~~~~-~~~~~v~~~ve~---~~~~~~~L~~~ 60 (65)
T cd04882 3 AVEVPD-KPGGLHEILQILSEEGINIEYMYAFVEKK-GGKALLIFRTED---IEKAIEVLQER 60 (65)
T ss_pred EEEeCC-CCcHHHHHHHHHHHCCCChhheEEEccCC-CCeEEEEEEeCC---HHHHHHHHHHC
Confidence 456777 99999999999999999999888766543 345556677754 55677777654
No 400
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.37 E-value=0.096 Score=53.03 Aligned_cols=81 Identities=17% Similarity=0.121 Sum_probs=49.5
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEec-ChHHHHHH-HhCCCc-EE--EeCCccc-hhHHHHHHHhcCC-Cee
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVG-CPVGVAKA-YGLGAD-YV--VDHTIRE-LDRFANQILSYGS-ELD 182 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~-s~~k~~~a-~~LGAd-~v--Id~~~~~-~~d~~~~i~~~~~-gvD 182 (655)
.+.+++|+||+|+||..++......|++|+.+++ ++++.+.+ .+++.. .+ .|..+.. ..++.+.+.+..+ ++|
T Consensus 4 ~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id 83 (253)
T PRK08642 4 SEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPIT 83 (253)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCe
Confidence 4678999999999999999887788999987654 44444433 334422 11 2443321 0122233333333 389
Q ss_pred EEEeCCCc
Q psy14589 183 ADHPGFTD 190 (655)
Q Consensus 183 vV~D~vG~ 190 (655)
+++.+.|.
T Consensus 84 ~li~~ag~ 91 (253)
T PRK08642 84 TVVNNALA 91 (253)
T ss_pred EEEECCCc
Confidence 99988763
No 401
>KOG1200|consensus
Probab=95.37 E-value=0.086 Score=52.64 Aligned_cols=81 Identities=15% Similarity=0.016 Sum_probs=53.9
Q ss_pred CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHH-HHHhCCC--cEE---EeCCccc-hhHHHHHHHhcCCCeeE
Q psy14589 111 PDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVA-KAYGLGA--DYV---VDHTIRE-LDRFANQILSYGSELDA 183 (655)
Q Consensus 111 Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~-~a~~LGA--d~v---Id~~~~~-~~d~~~~i~~~~~gvDv 183 (655)
...++|+|+++|||.+..|.....|++|++.+.+....+ .++.||. ++. .|..+.. .....++..+.-+.+++
T Consensus 14 sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~psv 93 (256)
T KOG1200|consen 14 SKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPSV 93 (256)
T ss_pred cceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCcE
Confidence 345789999999999999999889999988887655433 3567776 443 3433321 11212223232337899
Q ss_pred EEeCCCcc
Q psy14589 184 DHPGFTDP 191 (655)
Q Consensus 184 V~D~vG~~ 191 (655)
+++|.|-.
T Consensus 94 lVncAGIt 101 (256)
T KOG1200|consen 94 LVNCAGIT 101 (256)
T ss_pred EEEcCccc
Confidence 99999854
No 402
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=95.32 E-value=0.098 Score=52.93 Aligned_cols=81 Identities=15% Similarity=0.092 Sum_probs=50.3
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEec-ChHHHHHH----HhCCCcE-E--EeCCccc-hhHHHHHHHhcCCC
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVG-CPVGVAKA----YGLGADY-V--VDHTIRE-LDRFANQILSYGSE 180 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~-s~~k~~~a----~~LGAd~-v--Id~~~~~-~~d~~~~i~~~~~g 180 (655)
+|.+++|+|++|+||..+++.....|++|+++.+ ++++.+.. ++.|... + .|..+.. .++..+.+.+..+.
T Consensus 5 ~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (247)
T PRK12935 5 NGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGK 84 (247)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 5789999999999999999877778999877644 33443322 3344332 1 2333321 11223333333346
Q ss_pred eeEEEeCCCc
Q psy14589 181 LDADHPGFTD 190 (655)
Q Consensus 181 vDvV~D~vG~ 190 (655)
+|+++.++|.
T Consensus 85 id~vi~~ag~ 94 (247)
T PRK12935 85 VDILVNNAGI 94 (247)
T ss_pred CCEEEECCCC
Confidence 8999998876
No 403
>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional
Probab=95.24 E-value=0.12 Score=53.51 Aligned_cols=94 Identities=15% Similarity=0.113 Sum_probs=62.1
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh----CCCc---EEEeCCccchhHHHHHHH-hcCCCe
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG----LGAD---YVVDHTIRELDRFANQIL-SYGSEL 181 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~----LGAd---~vId~~~~~~~d~~~~i~-~~~~gv 181 (655)
++.+||=.|+ |.|..+..+++. |.+|++++.+++.++.+++ .|.. .++.. +..+ +. ...+.+
T Consensus 44 ~~~~vLDiGc--G~G~~a~~la~~-g~~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~------d~~~-l~~~~~~~f 113 (255)
T PRK11036 44 RPLRVLDAGG--GEGQTAIKLAEL-GHQVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHC------AAQD-IAQHLETPV 113 (255)
T ss_pred CCCEEEEeCC--CchHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcCCccceEEEEc------CHHH-HhhhcCCCC
Confidence 5678998886 677888888875 8899999999988877754 3432 22221 1111 21 122368
Q ss_pred eEEEeCCC----cchHHHHHHHHHHhccccceEEEe
Q psy14589 182 DADHPGFT----DPVYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 182 DvV~D~vG----~~~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
|+|+-... .+....++.+.+.|++||+++++.
T Consensus 114 D~V~~~~vl~~~~~~~~~l~~~~~~LkpgG~l~i~~ 149 (255)
T PRK11036 114 DLILFHAVLEWVADPKSVLQTLWSVLRPGGALSLMF 149 (255)
T ss_pred CEEEehhHHHhhCCHHHHHHHHHHHcCCCeEEEEEE
Confidence 99884321 111234788999999999998764
No 404
>PRK12746 short chain dehydrogenase; Provisional
Probab=95.20 E-value=0.11 Score=52.75 Aligned_cols=80 Identities=19% Similarity=0.135 Sum_probs=50.2
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEE-ecChHHHHHH-H---hCCCc-EE--EeCCccchhHHHHHHHhc----
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFAS-VGCPVGVAKA-Y---GLGAD-YV--VDHTIRELDRFANQILSY---- 177 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat-~~s~~k~~~a-~---~LGAd-~v--Id~~~~~~~d~~~~i~~~---- 177 (655)
.+.+++|+|++|++|..+++.....|++|++. .++.++.+.+ . +.+.. .+ .|..+. +++.+.+.+.
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~--~~i~~~~~~~~~~~ 82 (254)
T PRK12746 5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSI--DGVKKLVEQLKNEL 82 (254)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCH--HHHHHHHHHHHHHh
Confidence 46799999999999999998777789998764 5666554333 2 22322 12 244432 2333333322
Q ss_pred ----C-CCeeEEEeCCCcc
Q psy14589 178 ----G-SELDADHPGFTDP 191 (655)
Q Consensus 178 ----~-~gvDvV~D~vG~~ 191 (655)
+ +++|+++.+.|..
T Consensus 83 ~~~~~~~~id~vi~~ag~~ 101 (254)
T PRK12746 83 QIRVGTSEIDILVNNAGIG 101 (254)
T ss_pred ccccCCCCccEEEECCCCC
Confidence 1 2689999988753
No 405
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=95.17 E-value=0.087 Score=56.33 Aligned_cols=38 Identities=21% Similarity=0.265 Sum_probs=32.1
Q ss_pred CCCEEEEEcC--CCchHHHHHHHHHHcCCeEEEEecChHHH
Q psy14589 110 EPDTLFIIGA--NRGNGLAAIQVGKAYGLTVFASVGCPVGV 148 (655)
Q Consensus 110 ~Gd~VLI~Ga--sGgVG~~avQlAk~~Ga~Viat~~s~~k~ 148 (655)
.|++++|+|| |+|||.++++.....|++|+. ++..+++
T Consensus 8 ~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l 47 (303)
T PLN02730 8 RGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPAL 47 (303)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchh
Confidence 6999999999 899999999988889999988 4444443
No 406
>PRK14967 putative methyltransferase; Provisional
Probab=95.17 E-value=0.18 Score=51.13 Aligned_cols=97 Identities=18% Similarity=-0.003 Sum_probs=62.4
Q ss_pred CCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHh----CCCcEEEeCCccchhHHHHHHHhcCCC
Q psy14589 106 LYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYG----LGADYVVDHTIRELDRFANQILSYGSE 180 (655)
Q Consensus 106 ~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~----LGAd~vId~~~~~~~d~~~~i~~~~~g 180 (655)
.+ ++|++|+-.|+ |. |.+++.+++. |+ +|++++.+++..+.+++ .|....+... |+.+.+. .+.
T Consensus 33 ~~-~~~~~vLDlGc-G~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~-----d~~~~~~--~~~ 101 (223)
T PRK14967 33 GL-GPGRRVLDLCT-GS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRRG-----DWARAVE--FRP 101 (223)
T ss_pred cc-CCCCeEEEecC-CH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEEC-----chhhhcc--CCC
Confidence 34 68899999998 44 8888888875 66 99999999887765543 4543222111 2322221 237
Q ss_pred eeEEEeCCCc---------------------c----hHHHHHHHHHHhccccceEEEe
Q psy14589 181 LDADHPGFTD---------------------P----VYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 181 vDvV~D~vG~---------------------~----~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
+|+|+...+- . ..+.+..+.+.|++||+++++-
T Consensus 102 fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~~ 159 (223)
T PRK14967 102 FDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLVQ 159 (223)
T ss_pred eeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 9999864210 0 0112456788999999988753
No 407
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=95.16 E-value=0.11 Score=54.20 Aligned_cols=95 Identities=13% Similarity=0.073 Sum_probs=59.7
Q ss_pred EEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEE-EeCCccchhHHHHHHHhcC--CC-eeEEEeCC
Q psy14589 113 TLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYV-VDHTIRELDRFANQILSYG--SE-LDADHPGF 188 (655)
Q Consensus 113 ~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~v-Id~~~~~~~d~~~~i~~~~--~g-vDvV~D~v 188 (655)
+|+|+||+|.||..+++.+...|.+|.++++++++.. ..|...+ .|+.+. +.+.+.++... .+ +|.++-+.
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~---~~~~~~~~~d~~d~--~~l~~a~~~~~~~~g~~d~v~~~~ 75 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA---GPNEKHVKFDWLDE--DTWDNPFSSDDGMEPEISAVYLVA 75 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc---CCCCccccccCCCH--HHHHHHHhcccCcCCceeEEEEeC
Confidence 4899999999999999988888999999999876542 2343332 455543 23444443211 36 89998776
Q ss_pred Ccc--hHHHHHHHHHHhcccc--ceEEE
Q psy14589 189 TDP--VYRARRKYFADLAFNY--KHFFF 212 (655)
Q Consensus 189 G~~--~~~~l~~~l~~l~~gG--rlv~v 212 (655)
+.. ..+.....++.++..| ++|.+
T Consensus 76 ~~~~~~~~~~~~~i~aa~~~gv~~~V~~ 103 (285)
T TIGR03649 76 PPIPDLAPPMIKFIDFARSKGVRRFVLL 103 (285)
T ss_pred CCCCChhHHHHHHHHHHHHcCCCEEEEe
Confidence 642 1112445556655555 44443
No 408
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.12 E-value=0.1 Score=54.01 Aligned_cols=81 Identities=17% Similarity=0.122 Sum_probs=50.9
Q ss_pred CCCEEEEEcC--CCchHHHHHHHHHHcCCeEEEEecC---hHHHHHH-HhCCCcEE--EeCCccc-hhHHHHHHHhcCCC
Q psy14589 110 EPDTLFIIGA--NRGNGLAAIQVGKAYGLTVFASVGC---PVGVAKA-YGLGADYV--VDHTIRE-LDRFANQILSYGSE 180 (655)
Q Consensus 110 ~Gd~VLI~Ga--sGgVG~~avQlAk~~Ga~Viat~~s---~~k~~~a-~~LGAd~v--Id~~~~~-~~d~~~~i~~~~~g 180 (655)
.|++++|+|| ++|||.++++.....|++|+.+.+. +++.+.+ .++|...+ .|..+.. .+.+.+.+.+..++
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 84 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWDG 84 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhCC
Confidence 6789999996 5799999888777789999887543 3333333 34554322 3444331 11233333333357
Q ss_pred eeEEEeCCCc
Q psy14589 181 LDADHPGFTD 190 (655)
Q Consensus 181 vDvV~D~vG~ 190 (655)
+|+++.+.|.
T Consensus 85 iD~lvnnAG~ 94 (260)
T PRK06997 85 LDGLVHSIGF 94 (260)
T ss_pred CcEEEEcccc
Confidence 9999998874
No 409
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=95.11 E-value=0.045 Score=58.01 Aligned_cols=96 Identities=10% Similarity=0.001 Sum_probs=62.4
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHh----CCCcEEEeCCccchhHHHHHHHhcCCCeeE
Q psy14589 109 PEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYG----LGADYVVDHTIRELDRFANQILSYGSELDA 183 (655)
Q Consensus 109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~----LGAd~vId~~~~~~~d~~~~i~~~~~gvDv 183 (655)
.+|++|+-.|+ |. |.+++.+++ .|+ +|++++.++...+.+++ .+....+..... +.. ....+++|+
T Consensus 158 ~~g~~VLDvGc-Gs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~---~~~---~~~~~~fDl 228 (288)
T TIGR00406 158 LKDKNVIDVGC-GS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLI---YLE---QPIEGKADV 228 (288)
T ss_pred CCCCEEEEeCC-Ch-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEec---ccc---cccCCCceE
Confidence 57899999998 44 777777776 566 89999999987777654 232211111110 111 011237999
Q ss_pred EEeCCCcc-hHHHHHHHHHHhccccceEEEe
Q psy14589 184 DHPGFTDP-VYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 184 V~D~vG~~-~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
|+...... ..+.+..+.+.|++||++++.|
T Consensus 229 Vvan~~~~~l~~ll~~~~~~LkpgG~li~sg 259 (288)
T TIGR00406 229 IVANILAEVIKELYPQFSRLVKPGGWLILSG 259 (288)
T ss_pred EEEecCHHHHHHHHHHHHHHcCCCcEEEEEe
Confidence 98765444 2234677889999999999877
No 410
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=95.08 E-value=0.12 Score=55.91 Aligned_cols=76 Identities=17% Similarity=0.124 Sum_probs=50.4
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hC--CC-cEEE--eCCccchhHHHHHHHhcCCCee
Q psy14589 109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GL--GA-DYVV--DHTIRELDRFANQILSYGSELD 182 (655)
Q Consensus 109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~L--GA-d~vI--d~~~~~~~d~~~~i~~~~~gvD 182 (655)
+.+.+|||+||+|.||..+++.....|.+|++++++.++.+.+. .+ +. -.++ |..+. +.+.+.+ .++|
T Consensus 8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~--~~~~~~~----~~~d 81 (353)
T PLN02896 8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEE--GSFDEAV----KGCD 81 (353)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCH--HHHHHHH----cCCC
Confidence 57889999999999999999988888999999888776554432 11 21 1122 22221 1222222 2579
Q ss_pred EEEeCCCc
Q psy14589 183 ADHPGFTD 190 (655)
Q Consensus 183 vV~D~vG~ 190 (655)
+|+.+++.
T Consensus 82 ~Vih~A~~ 89 (353)
T PLN02896 82 GVFHVAAS 89 (353)
T ss_pred EEEECCcc
Confidence 99988764
No 411
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=95.06 E-value=0.12 Score=52.25 Aligned_cols=77 Identities=16% Similarity=0.063 Sum_probs=50.1
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCc-EE--EeCCccc-hhHHHHHHHhcCCCeeEEE
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGAD-YV--VDHTIRE-LDRFANQILSYGSELDADH 185 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd-~v--Id~~~~~-~~d~~~~i~~~~~gvDvV~ 185 (655)
.+++++|+|++|++|...++.....|++|++++++. ....+.. .. .|..+.. .++..+.+.+..+.+|+++
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~-----~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi 81 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF-----LTQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVLV 81 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch-----hhhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 678999999999999999988878899999998865 2222221 11 2333321 1122223333334789999
Q ss_pred eCCCcc
Q psy14589 186 PGFTDP 191 (655)
Q Consensus 186 D~vG~~ 191 (655)
.+.|..
T Consensus 82 ~~ag~~ 87 (252)
T PRK08220 82 NAAGIL 87 (252)
T ss_pred ECCCcC
Confidence 998753
No 412
>PRK07201 short chain dehydrogenase; Provisional
Probab=95.05 E-value=0.11 Score=60.68 Aligned_cols=81 Identities=21% Similarity=0.145 Sum_probs=54.5
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH----hCCCcEE---EeCCccc-hhHHHHHHHhcCCCe
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY----GLGADYV---VDHTIRE-LDRFANQILSYGSEL 181 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~----~LGAd~v---Id~~~~~-~~d~~~~i~~~~~gv 181 (655)
.|.+++|+||+||+|..+++.....|++|+++++++++.+.+. +.|.... .|..+.. ..++.+.+.+..+++
T Consensus 370 ~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i 449 (657)
T PRK07201 370 VGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGHV 449 (657)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence 4789999999999999998877778999999999887765542 2343221 2444321 012223333333479
Q ss_pred eEEEeCCCc
Q psy14589 182 DADHPGFTD 190 (655)
Q Consensus 182 DvV~D~vG~ 190 (655)
|+++.+.|.
T Consensus 450 d~li~~Ag~ 458 (657)
T PRK07201 450 DYLVNNAGR 458 (657)
T ss_pred CEEEECCCC
Confidence 999999884
No 413
>cd04878 ACT_AHAS N-terminal ACT domain of the Escherichia coli IlvH-like regulatory subunit of acetohydroxyacid synthase (AHAS). ACT_AHAS: N-terminal ACT domain of the Escherichia coli IlvH-like regulatory subunit of acetohydroxyacid synthase (AHAS). AHAS catalyses the first common step in the biosynthesis of the three branched-chain amino acids. The first step involves the condensation of either pyruvate or 2-ketobutyrate with the two-carbon hydroxyethyl fragment derived from another pyruvate molecule, covalently bound to the coenzyme thiamine diphosphate. Bacterial AHASs generally consist of regulatory and catalytic subunits. The effector (valine) binding sites are proposed to be located in two symmetrically related positions in the interface between a pair of N-terminal ACT domains with the C-terminal domain of IlvH contacting the catalytic dimer. Plants Arabidopsis and Oryza have tandem IlvH subunits; both the first and second ACT domain sequences are present in this CD. Members of
Probab=95.04 E-value=0.14 Score=41.01 Aligned_cols=66 Identities=14% Similarity=0.183 Sum_probs=47.5
Q ss_pred EEEEEccCCCcchHHHHHHHHHhCCcceeeeecccC-CCCCcceEEEEEecCCchHHHHHHHHHccCCc
Q psy14589 263 FVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSS-TRIENNYEFMVECAPGGDLSSVIESLRSSCSY 330 (655)
Q Consensus 263 sl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~-~~~~~~Y~FfVd~eg~~~v~~~l~~L~~~~~~ 330 (655)
++.+...+ ++|.|.++++.|+++++|+..+...+. ......+.+-++.. +..+.+++++|++.+.-
T Consensus 2 ~l~i~~~d-~~g~l~~i~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~~~v 68 (72)
T cd04878 2 TLSVLVEN-EPGVLNRISGLFARRGFNIESLTVGPTEDPGISRITIVVEGD-DDVIEQIVKQLNKLVDV 68 (72)
T ss_pred EEEEEEcC-CCcHHHHHHHHHHhCCCCEEEEEeeecCCCCeEEEEEEEECC-HHHHHHHHHHHhCCccE
Confidence 35566666 899999999999999999999987654 22223344444433 37888999999877553
No 414
>PRK12744 short chain dehydrogenase; Provisional
Probab=95.01 E-value=0.13 Score=52.58 Aligned_cols=81 Identities=14% Similarity=0.059 Sum_probs=49.4
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh----HHHHH----HHhCCCcE---EEeCCccc-hhHHHHHHHhc
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCP----VGVAK----AYGLGADY---VVDHTIRE-LDRFANQILSY 177 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~----~k~~~----a~~LGAd~---vId~~~~~-~~d~~~~i~~~ 177 (655)
.|.+|+|+|++|+||..+++.....|++|+.++++. ++.+. ++..|... ..|..+.. ...+.+.+.+.
T Consensus 7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 86 (257)
T PRK12744 7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAA 86 (257)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHh
Confidence 578999999999999999988878899976665432 22221 22335432 13444321 01222233333
Q ss_pred CCCeeEEEeCCCc
Q psy14589 178 GSELDADHPGFTD 190 (655)
Q Consensus 178 ~~gvDvV~D~vG~ 190 (655)
.+++|+++.+.|.
T Consensus 87 ~~~id~li~~ag~ 99 (257)
T PRK12744 87 FGRPDIAINTVGK 99 (257)
T ss_pred hCCCCEEEECCcc
Confidence 3478999998875
No 415
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=95.01 E-value=0.095 Score=55.62 Aligned_cols=41 Identities=17% Similarity=-0.002 Sum_probs=34.5
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHH
Q psy14589 109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVA 149 (655)
Q Consensus 109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~ 149 (655)
.+|.+|+|+||+|.||..+++.....|.+|++++++.++.+
T Consensus 3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~ 43 (322)
T PLN02986 3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRK 43 (322)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchH
Confidence 36889999999999999999877778999998888765433
No 416
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=95.00 E-value=0.068 Score=54.46 Aligned_cols=99 Identities=13% Similarity=0.093 Sum_probs=62.0
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hCCCcEE--------------EeCCccchhHHHHH
Q psy14589 109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GLGADYV--------------VDHTIRELDRFANQ 173 (655)
Q Consensus 109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~LGAd~v--------------Id~~~~~~~d~~~~ 173 (655)
.++.+||+.|+ |.|.-++-||. +|.+|++++.++..++.+. +.|.... |+.... |+.+.
T Consensus 36 ~~~~rvL~~gC--G~G~da~~LA~-~G~~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~---D~~~l 109 (218)
T PRK13255 36 PAGSRVLVPLC--GKSLDMLWLAE-QGHEVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCG---DFFAL 109 (218)
T ss_pred CCCCeEEEeCC--CChHhHHHHHh-CCCeEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEEC---cccCC
Confidence 46789999998 78888888886 7999999999998877653 3332211 000000 11111
Q ss_pred HHhcCCCeeEEEeCCC-----cc-hHHHHHHHHHHhccccceEEEe
Q psy14589 174 ILSYGSELDADHPGFT-----DP-VYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 174 i~~~~~gvDvV~D~vG-----~~-~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
-....+.+|.|+|..- .+ -.+-++...++|++||+++++.
T Consensus 110 ~~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pgG~~~l~~ 155 (218)
T PRK13255 110 TAADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAGCRGLLVT 155 (218)
T ss_pred CcccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCCCeEEEEE
Confidence 0011136899998552 11 1122677788999999977765
No 417
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.96 E-value=0.15 Score=52.32 Aligned_cols=81 Identities=12% Similarity=0.041 Sum_probs=49.9
Q ss_pred CCCEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecC-----------hHH----HHHHHhCCCcEE---EeCCccc-hh
Q psy14589 110 EPDTLFIIGAN--RGNGLAAIQVGKAYGLTVFASVGC-----------PVG----VAKAYGLGADYV---VDHTIRE-LD 168 (655)
Q Consensus 110 ~Gd~VLI~Gas--GgVG~~avQlAk~~Ga~Viat~~s-----------~~k----~~~a~~LGAd~v---Id~~~~~-~~ 168 (655)
+|.+|+|+||+ +|||...++.....|++|+.+.++ .++ .+.+++.|.... .|.++.. ..
T Consensus 5 ~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i~ 84 (256)
T PRK12859 5 KNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAPK 84 (256)
T ss_pred CCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHH
Confidence 68999999998 499999998888899999887432 111 122344565322 2433321 11
Q ss_pred HHHHHHHhcCCCeeEEEeCCCc
Q psy14589 169 RFANQILSYGSELDADHPGFTD 190 (655)
Q Consensus 169 d~~~~i~~~~~gvDvV~D~vG~ 190 (655)
++.+.+.+..+.+|+++.+.|.
T Consensus 85 ~~~~~~~~~~g~id~li~~ag~ 106 (256)
T PRK12859 85 ELLNKVTEQLGYPHILVNNAAY 106 (256)
T ss_pred HHHHHHHHHcCCCcEEEECCCC
Confidence 2333333333468999988874
No 418
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=94.92 E-value=0.12 Score=57.60 Aligned_cols=75 Identities=12% Similarity=0.017 Sum_probs=54.8
Q ss_pred CCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHH-HhCCCcEEEeCCccchhHHHHHHHhcCCCee
Q psy14589 105 PLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKA-YGLGADYVVDHTIRELDRFANQILSYGSELD 182 (655)
Q Consensus 105 ~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a-~~LGAd~vId~~~~~~~d~~~~i~~~~~gvD 182 (655)
+.+ .|.+|+|.|+ |++|.+++..++..|+ +++.+.|+.+|.+.+ .++|...++.+. ++.+.+. .+|
T Consensus 177 ~~l--~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~~-----~l~~~l~----~aD 244 (414)
T PRK13940 177 DNI--SSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYLS-----ELPQLIK----KAD 244 (414)
T ss_pred cCc--cCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecHH-----HHHHHhc----cCC
Confidence 445 7889999999 9999999998888997 788888888776555 445522333321 2333332 589
Q ss_pred EEEeCCCcc
Q psy14589 183 ADHPGFTDP 191 (655)
Q Consensus 183 vV~D~vG~~ 191 (655)
+|+.|++++
T Consensus 245 iVI~aT~a~ 253 (414)
T PRK13940 245 IIIAAVNVL 253 (414)
T ss_pred EEEECcCCC
Confidence 999999998
No 419
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=94.92 E-value=0.12 Score=53.25 Aligned_cols=79 Identities=11% Similarity=0.024 Sum_probs=47.4
Q ss_pred CEEEEEcCCCchHHHHHHHHHHcCCeEEEEecC-hHHHHHH-HhC----CCcE---EEeCCccc-h----hHHHHHHHhc
Q psy14589 112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGC-PVGVAKA-YGL----GADY---VVDHTIRE-L----DRFANQILSY 177 (655)
Q Consensus 112 d~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s-~~k~~~a-~~L----GAd~---vId~~~~~-~----~d~~~~i~~~ 177 (655)
.+++|+||+||||...++.....|++|+++++. +++.+.+ .++ |... ..|..+.. . +++.+.+.+.
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~ 81 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA 81 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence 368999999999999998887899999887643 3444332 222 2111 13444321 0 1112222222
Q ss_pred CCCeeEEEeCCCc
Q psy14589 178 GSELDADHPGFTD 190 (655)
Q Consensus 178 ~~gvDvV~D~vG~ 190 (655)
.+++|+++.++|.
T Consensus 82 ~g~iD~lv~nAG~ 94 (267)
T TIGR02685 82 FGRCDVLVNNASA 94 (267)
T ss_pred cCCceEEEECCcc
Confidence 3479999988874
No 420
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=94.88 E-value=0.15 Score=51.29 Aligned_cols=77 Identities=18% Similarity=0.094 Sum_probs=49.3
Q ss_pred CEEEEEcCCCchHHHHHHHHHHcCCeEEEE-ecChHHHHHH----HhCCCcE-E--EeCCccchhHHHH---HHHhcCCC
Q psy14589 112 DTLFIIGANRGNGLAAIQVGKAYGLTVFAS-VGCPVGVAKA----YGLGADY-V--VDHTIRELDRFAN---QILSYGSE 180 (655)
Q Consensus 112 d~VLI~GasGgVG~~avQlAk~~Ga~Viat-~~s~~k~~~a----~~LGAd~-v--Id~~~~~~~d~~~---~i~~~~~g 180 (655)
.+++|+||+|+||...++.....|++|+++ .+++++.+.+ ++.|... + .|..+. +++.+ .+.+..++
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~--~~i~~~~~~~~~~~~~ 79 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDE--NQVVAMFTAIDQHDEP 79 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCH--HHHHHHHHHHHHhCCC
Confidence 479999999999999998877889998764 4555544332 3344321 1 344432 22333 33333457
Q ss_pred eeEEEeCCCc
Q psy14589 181 LDADHPGFTD 190 (655)
Q Consensus 181 vDvV~D~vG~ 190 (655)
+|+++.++|.
T Consensus 80 id~vi~~ag~ 89 (247)
T PRK09730 80 LAALVNNAGI 89 (247)
T ss_pred CCEEEECCCC
Confidence 9999999885
No 421
>cd04874 ACT_Af1403 N-terminal ACT domain of the yet uncharacterized, small (~133 a.a.), putative amino acid binding protein, Af1403, and related domains. This CD includes the N-terminal ACT domain of the yet uncharacterized, small (~133 a.a.), putative amino acid binding protein, Af1403, from Archaeoglobus fulgidus and other related archeal ACT domains. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=94.87 E-value=0.19 Score=40.42 Aligned_cols=64 Identities=19% Similarity=0.210 Sum_probs=47.8
Q ss_pred EEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecCCchHHHHHHHHHccCC
Q psy14589 263 FVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGGDLSSVIESLRSSCS 329 (655)
Q Consensus 263 sl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg~~~v~~~l~~L~~~~~ 329 (655)
++.+..++ ++|.|+++++.++++++|+..+...+.. .+...+.+++++...+.++++.|++...
T Consensus 2 ~l~i~~~d-~~g~l~~i~~~l~~~~~~i~~~~~~~~~--~~~~~~~i~~~~~~~~~~~~~~L~~~~~ 65 (72)
T cd04874 2 ALSIIAED-KPGVLRDLTGVIAEHGGNITYTQQFIER--EGKARIYMELEGVGDIEELVEELRSLPI 65 (72)
T ss_pred eEEEEeCC-CCChHHHHHHHHHhCCCCEEEEEEeccC--CCeEEEEEEEeccccHHHHHHHHhCCCC
Confidence 35566677 8999999999999999999988765542 3345566777664567788888887644
No 422
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=94.86 E-value=0.089 Score=55.86 Aligned_cols=76 Identities=18% Similarity=0.068 Sum_probs=49.5
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH---hC-CC---cEEE--eCCccchhHHHHHHHhcCC
Q psy14589 109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY---GL-GA---DYVV--DHTIRELDRFANQILSYGS 179 (655)
Q Consensus 109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~---~L-GA---d~vI--d~~~~~~~d~~~~i~~~~~ 179 (655)
..|.+|+|+||+|+||..+++.....|.+|+++++++++.+... .. +. -.++ |..+. +++.+.+.
T Consensus 3 ~~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~--~~~~~~~~---- 76 (325)
T PLN02989 3 DGGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDE--GSFELAID---- 76 (325)
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCc--hHHHHHHc----
Confidence 35789999999999999999888888999988877765433221 11 21 1222 33332 12333232
Q ss_pred CeeEEEeCCCc
Q psy14589 180 ELDADHPGFTD 190 (655)
Q Consensus 180 gvDvV~D~vG~ 190 (655)
++|+|+.++|.
T Consensus 77 ~~d~vih~A~~ 87 (325)
T PLN02989 77 GCETVFHTASP 87 (325)
T ss_pred CCCEEEEeCCC
Confidence 58999998873
No 423
>PRK08317 hypothetical protein; Provisional
Probab=94.85 E-value=0.09 Score=52.66 Aligned_cols=103 Identities=17% Similarity=0.039 Sum_probs=65.1
Q ss_pred cCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcC--CeEEEEecChHHHHHHHhC--CCcEEEeCCccchhHHHHHHHhcC
Q psy14589 103 SKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYG--LTVFASVGCPVGVAKAYGL--GADYVVDHTIRELDRFANQILSYG 178 (655)
Q Consensus 103 ~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~G--a~Viat~~s~~k~~~a~~L--GAd~vId~~~~~~~d~~~~i~~~~ 178 (655)
+...+ +++++||-.|+ | .|..+..+++..+ .+|++++.+++.++.+++. +....+..... +..+ ..-..
T Consensus 13 ~~~~~-~~~~~vLdiG~-G-~G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~---d~~~-~~~~~ 85 (241)
T PRK08317 13 ELLAV-QPGDRVLDVGC-G-PGNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRG---DADG-LPFPD 85 (241)
T ss_pred HHcCC-CCCCEEEEeCC-C-CCHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEec---cccc-CCCCC
Confidence 34456 78999999998 3 4888899998874 5899999999888777654 11111111111 1110 00012
Q ss_pred CCeeEEEeCC-----CcchHHHHHHHHHHhccccceEEEe
Q psy14589 179 SELDADHPGF-----TDPVYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 179 ~gvDvV~D~v-----G~~~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
+.+|+|+-.. ... -..+....++|++||++++..
T Consensus 86 ~~~D~v~~~~~~~~~~~~-~~~l~~~~~~L~~gG~l~~~~ 124 (241)
T PRK08317 86 GSFDAVRSDRVLQHLEDP-ARALAEIARVLRPGGRVVVLD 124 (241)
T ss_pred CCceEEEEechhhccCCH-HHHHHHHHHHhcCCcEEEEEe
Confidence 3688877432 222 134788899999999998764
No 424
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.84 E-value=0.17 Score=50.69 Aligned_cols=79 Identities=16% Similarity=0.056 Sum_probs=49.1
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHH-HHHH----HhCCCc-EE--EeCCccchhHHHHH---HHhcC
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVG-VAKA----YGLGAD-YV--VDHTIRELDRFANQ---ILSYG 178 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k-~~~a----~~LGAd-~v--Id~~~~~~~d~~~~---i~~~~ 178 (655)
+..+|+|+||+|++|..+++.....|.+|+++.++..+ .+.+ .+.+.. .+ .|..+. +++.+. +.+..
T Consensus 5 ~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~--~~v~~~~~~~~~~~ 82 (249)
T PRK12825 5 MGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDK--AALEAAVAAAVERF 82 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCH--HHHHHHHHHHHHHc
Confidence 45689999999999999999888899998776655432 2222 233322 11 233332 233332 22223
Q ss_pred CCeeEEEeCCCc
Q psy14589 179 SELDADHPGFTD 190 (655)
Q Consensus 179 ~gvDvV~D~vG~ 190 (655)
+++|+|+.++|.
T Consensus 83 ~~id~vi~~ag~ 94 (249)
T PRK12825 83 GRIDILVNNAGI 94 (249)
T ss_pred CCCCEEEECCcc
Confidence 478999998873
No 425
>PRK06737 acetolactate synthase 1 regulatory subunit; Validated
Probab=94.84 E-value=0.18 Score=42.89 Aligned_cols=69 Identities=7% Similarity=0.158 Sum_probs=54.7
Q ss_pred EEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecC-CchHHHHHHHHHccCCcEEE
Q psy14589 263 FVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAP-GGDLSSVIESLRSSCSYINI 333 (655)
Q Consensus 263 sl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg-~~~v~~~l~~L~~~~~~v~i 333 (655)
++...+.| +||-|.++..+|+.+|.|+..+..-|+.. ++-..+-+-+.+ +..+.++.+.|++.-+-+++
T Consensus 4 tisi~v~n-~pGVL~Ri~~lf~rRgfNI~Sl~vg~te~-~~~sriti~~~~~~~~i~qi~kQL~KLidV~~V 73 (76)
T PRK06737 4 TFSLVIHN-DPSVLLRISGIFARRGYYISSLNLNERDT-SGVSEMKLTAVCTENEATLLVSQLKKLINVLQV 73 (76)
T ss_pred EEEEEEec-CCCHHHHHHHHHhccCcceEEEEecccCC-CCeeEEEEEEECCHHHHHHHHHHHhCCcCEEEE
Confidence 45555667 89999999999999999999999888663 455666677677 78889999999987664443
No 426
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=94.84 E-value=0.091 Score=56.64 Aligned_cols=77 Identities=10% Similarity=-0.017 Sum_probs=50.4
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH-HhCC----CcEE-EeCCccchhHHHHHHHhcCCCeeE
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA-YGLG----ADYV-VDHTIRELDRFANQILSYGSELDA 183 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a-~~LG----Ad~v-Id~~~~~~~d~~~~i~~~~~gvDv 183 (655)
.|.+|+|+||+|.||..+++.....|.+|+++++++...... ..++ ...+ .|-.+. +++.+.+.+. ++|+
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~--~~~~~~~~~~--~~d~ 78 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDA--AKLRKAIAEF--KPEI 78 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCH--HHHHHHHhhc--CCCE
Confidence 578999999999999999998888899999998776543222 2222 1111 233332 2333333322 5799
Q ss_pred EEeCCCc
Q psy14589 184 DHPGFTD 190 (655)
Q Consensus 184 V~D~vG~ 190 (655)
|+.++|.
T Consensus 79 vih~A~~ 85 (349)
T TIGR02622 79 VFHLAAQ 85 (349)
T ss_pred EEECCcc
Confidence 9999874
No 427
>KOG1210|consensus
Probab=94.83 E-value=0.14 Score=54.63 Aligned_cols=81 Identities=17% Similarity=0.132 Sum_probs=57.2
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh-CCC----cE-------EEeCCccchhHHHHHHHh
Q psy14589 109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG-LGA----DY-------VVDHTIRELDRFANQILS 176 (655)
Q Consensus 109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~-LGA----d~-------vId~~~~~~~d~~~~i~~ 176 (655)
++.-+|+|+|+|.|+|++....++..|+.|..+.++.+|+..+.+ ++- .. +.||.+- +...++++.
T Consensus 31 k~~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v--~~~~~~l~~ 108 (331)
T KOG1210|consen 31 KPRRHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSV--SKVIEELRD 108 (331)
T ss_pred CccceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHH--HHHHhhhhh
Confidence 345789999999999999999999999999999999999887743 331 11 1222211 122333333
Q ss_pred cCCCeeEEEeCCCcc
Q psy14589 177 YGSELDADHPGFTDP 191 (655)
Q Consensus 177 ~~~gvDvV~D~vG~~ 191 (655)
..+.+|.++.|.|..
T Consensus 109 ~~~~~d~l~~cAG~~ 123 (331)
T KOG1210|consen 109 LEGPIDNLFCCAGVA 123 (331)
T ss_pred ccCCcceEEEecCcc
Confidence 335789999999875
No 428
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=94.81 E-value=0.12 Score=51.51 Aligned_cols=96 Identities=15% Similarity=0.127 Sum_probs=60.2
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh----CCCcEEEeCCccchhHHHHHHHhcCCCeeEE
Q psy14589 109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG----LGADYVVDHTIRELDRFANQILSYGSELDAD 184 (655)
Q Consensus 109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~----LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV 184 (655)
.++.+||-.|+ |.|..++.+|+. |.+|++++.+++-++.+++ .|...+ +.... ++.+. ...+.+|+|
T Consensus 29 ~~~~~vLDiGc--G~G~~a~~La~~-g~~V~gvD~S~~~i~~a~~~~~~~~~~~v-~~~~~---d~~~~--~~~~~fD~I 99 (197)
T PRK11207 29 VKPGKTLDLGC--GNGRNSLYLAAN-GFDVTAWDKNPMSIANLERIKAAENLDNL-HTAVV---DLNNL--TFDGEYDFI 99 (197)
T ss_pred CCCCcEEEECC--CCCHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHcCCCcc-eEEec---ChhhC--CcCCCcCEE
Confidence 46678999997 567788888875 8899999999876666543 333221 11111 22111 112368999
Q ss_pred EeCCCc------chHHHHHHHHHHhccccceEEEe
Q psy14589 185 HPGFTD------PVYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 185 ~D~vG~------~~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
+....- .....+....++|++||+++++.
T Consensus 100 ~~~~~~~~~~~~~~~~~l~~i~~~LkpgG~~~~~~ 134 (197)
T PRK11207 100 LSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVA 134 (197)
T ss_pred EEecchhhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 865331 11133677788899999976653
No 429
>cd04885 ACT_ThrD-I Tandem C-terminal ACT domains of threonine dehydratase I (ThrD-I; L-threonine hydrolyase). This CD includes each of two tandem C-terminal ACT domains of threonine dehydratase I (ThrD-I; L-threonine hydrolyase) which catalyzes the committed step in branched chain amino acid biosynthesis in plants and microorganisms, the pyridoxal 5'-phosphate (PLP)-dependent dehydration/deamination of L-threonine (or L-serine) to 2-ketobutyrate (or pyruvate). ThrD-I is a cooperative, feedback-regulated (isoleucine and valine) allosteric enzyme that forms a tetramer and contains four pyridoxal phosphate moieties. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=94.79 E-value=0.093 Score=43.16 Aligned_cols=62 Identities=21% Similarity=0.193 Sum_probs=45.2
Q ss_pred EEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecCCchHHHHHHHHHccC
Q psy14589 265 IFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGGDLSSVIESLRSSC 328 (655)
Q Consensus 265 ~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg~~~v~~~l~~L~~~~ 328 (655)
.+++++ +||+|.++++.++. +.|++.+.-|-.........+-+++.+.+.+.++++.|++..
T Consensus 2 ~v~ipd-kPG~l~~~~~~i~~-~~nI~~~~~~~~~~~~~~v~v~ie~~~~~~~~~i~~~L~~~G 63 (68)
T cd04885 2 AVTFPE-RPGALKKFLELLGP-PRNITEFHYRNQGGDEARVLVGIQVPDREDLAELKERLEALG 63 (68)
T ss_pred EEECCC-CCCHHHHHHHHhCC-CCcEEEEEEEcCCCCceEEEEEEEeCCHHHHHHHHHHHHHcC
Confidence 456777 99999999999999 999999877665533333444444444567888888887653
No 430
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=94.77 E-value=0.17 Score=53.87 Aligned_cols=92 Identities=15% Similarity=-0.013 Sum_probs=61.9
Q ss_pred CCEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCC
Q psy14589 111 PDTLFIIGANRGNGLAAIQVGKAYGL--TVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGF 188 (655)
Q Consensus 111 Gd~VLI~GasGgVG~~avQlAk~~Ga--~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~v 188 (655)
..+|.|.|+ |.+|...++..+..|. +|++.++++++.+.+++.|....+. . +..+.+ .+.|+|+.|+
T Consensus 6 ~~~I~IIG~-G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~--~----~~~~~~----~~aDvViiav 74 (307)
T PRK07502 6 FDRVALIGI-GLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVT--T----SAAEAV----KGADLVILCV 74 (307)
T ss_pred CcEEEEEee-CHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec--C----CHHHHh----cCCCEEEECC
Confidence 367999998 9999999888888884 8999999998888888888643221 1 122222 2579999999
Q ss_pred CcchH-HHHHHHHHHhccccceEEEe
Q psy14589 189 TDPVY-RARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 189 G~~~~-~~l~~~l~~l~~gGrlv~v~ 213 (655)
..... +.+......++++..++.++
T Consensus 75 p~~~~~~v~~~l~~~l~~~~iv~dvg 100 (307)
T PRK07502 75 PVGASGAVAAEIAPHLKPGAIVTDVG 100 (307)
T ss_pred CHHHHHHHHHHHHhhCCCCCEEEeCc
Confidence 87641 11233334556665555444
No 431
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=94.74 E-value=0.13 Score=52.08 Aligned_cols=77 Identities=21% Similarity=0.129 Sum_probs=48.2
Q ss_pred CEEEEEcCCCchHHHHHHHHHHcCCeEEEEe-cChHHHHHH----HhCCCcEE---EeCCccchhHHHH---HHHhcCCC
Q psy14589 112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASV-GCPVGVAKA----YGLGADYV---VDHTIRELDRFAN---QILSYGSE 180 (655)
Q Consensus 112 d~VLI~GasGgVG~~avQlAk~~Ga~Viat~-~s~~k~~~a----~~LGAd~v---Id~~~~~~~d~~~---~i~~~~~g 180 (655)
++|+|+||+|+||..+++.....|++|+.+. +++++.+.+ ++.+.... .|..+. +++.+ .+.+..++
T Consensus 3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~--~~~~~~~~~~~~~~~~ 80 (248)
T PRK06947 3 KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANE--ADVIAMFDAVQSAFGR 80 (248)
T ss_pred cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCH--HHHHHHHHHHHHhcCC
Confidence 4799999999999999888878899987664 444444332 23343221 233332 23333 33332347
Q ss_pred eeEEEeCCCc
Q psy14589 181 LDADHPGFTD 190 (655)
Q Consensus 181 vDvV~D~vG~ 190 (655)
+|+++.++|.
T Consensus 81 id~li~~ag~ 90 (248)
T PRK06947 81 LDALVNNAGI 90 (248)
T ss_pred CCEEEECCcc
Confidence 8999998874
No 432
>PRK06123 short chain dehydrogenase; Provisional
Probab=94.73 E-value=0.22 Score=50.28 Aligned_cols=79 Identities=18% Similarity=0.095 Sum_probs=48.9
Q ss_pred CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEe-cChHHHHH----HHhCCCcE-E--EeCCccchhHHHH---HHHhcCC
Q psy14589 111 PDTLFIIGANRGNGLAAIQVGKAYGLTVFASV-GCPVGVAK----AYGLGADY-V--VDHTIRELDRFAN---QILSYGS 179 (655)
Q Consensus 111 Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~-~s~~k~~~----a~~LGAd~-v--Id~~~~~~~d~~~---~i~~~~~ 179 (655)
+.+++|+|++|+||..+++.....|++|+.+. +++++.+. +++.|... + .|.++. +++.+ .+.+..+
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~--~~~~~~~~~~~~~~~ 79 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADE--ADVLRLFEAVDRELG 79 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCH--HHHHHHHHHHHHHhC
Confidence 45799999999999988887777899887665 33443332 23345432 2 244432 12333 3333334
Q ss_pred CeeEEEeCCCcc
Q psy14589 180 ELDADHPGFTDP 191 (655)
Q Consensus 180 gvDvV~D~vG~~ 191 (655)
.+|+++.++|..
T Consensus 80 ~id~li~~ag~~ 91 (248)
T PRK06123 80 RLDALVNNAGIL 91 (248)
T ss_pred CCCEEEECCCCC
Confidence 789999988753
No 433
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=94.68 E-value=0.32 Score=51.90 Aligned_cols=34 Identities=21% Similarity=0.286 Sum_probs=30.3
Q ss_pred CCCEEEEEcCC--CchHHHHHHHHHHcCCeEEEEec
Q psy14589 110 EPDTLFIIGAN--RGNGLAAIQVGKAYGLTVFASVG 143 (655)
Q Consensus 110 ~Gd~VLI~Gas--GgVG~~avQlAk~~Ga~Viat~~ 143 (655)
.|++++|+|++ +|||.+.++.....|++|+..++
T Consensus 7 ~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~ 42 (299)
T PRK06300 7 TGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTW 42 (299)
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEec
Confidence 78999999995 89999999999899999988653
No 434
>KOG1208|consensus
Probab=94.68 E-value=0.12 Score=55.49 Aligned_cols=81 Identities=15% Similarity=0.111 Sum_probs=54.8
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-h----CCCcEE----EeCCccc-hhHHHHHHHhcCC
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-G----LGADYV----VDHTIRE-LDRFANQILSYGS 179 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~----LGAd~v----Id~~~~~-~~d~~~~i~~~~~ 179 (655)
.|.+++|+|+++|||...++-...+|++|+.+.++.++.+.++ + .....+ +|-.+.. ...+++..++...
T Consensus 34 ~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~~ 113 (314)
T KOG1208|consen 34 SGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKEG 113 (314)
T ss_pred CCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcCC
Confidence 6789999999999999999888889999999999987665553 2 222222 3333321 1123444444444
Q ss_pred CeeEEEeCCCc
Q psy14589 180 ELDADHPGFTD 190 (655)
Q Consensus 180 gvDvV~D~vG~ 190 (655)
..|+.+..+|-
T Consensus 114 ~ldvLInNAGV 124 (314)
T KOG1208|consen 114 PLDVLINNAGV 124 (314)
T ss_pred CccEEEeCccc
Confidence 78888877664
No 435
>PRK12747 short chain dehydrogenase; Provisional
Probab=94.66 E-value=0.18 Score=51.27 Aligned_cols=81 Identities=14% Similarity=0.086 Sum_probs=49.4
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEe-cChHHHHHH----HhCCCcEE---EeCCccc-hhHHHHHHHh----
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASV-GCPVGVAKA----YGLGADYV---VDHTIRE-LDRFANQILS---- 176 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~-~s~~k~~~a----~~LGAd~v---Id~~~~~-~~d~~~~i~~---- 176 (655)
.|.+++|+|++||||..+++.....|++|+.+. +++++.+.+ ...|.... .|..+.. .+.+.+.+.+
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN 82 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhh
Confidence 578999999999999999998888899998764 444443322 23343221 2333221 1122333322
Q ss_pred c-C-CCeeEEEeCCCc
Q psy14589 177 Y-G-SELDADHPGFTD 190 (655)
Q Consensus 177 ~-~-~gvDvV~D~vG~ 190 (655)
. + +++|+++.++|.
T Consensus 83 ~~g~~~id~lv~~Ag~ 98 (252)
T PRK12747 83 RTGSTKFDILINNAGI 98 (252)
T ss_pred hcCCCCCCEEEECCCc
Confidence 1 1 268999998873
No 436
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]
Probab=94.66 E-value=0.14 Score=53.06 Aligned_cols=100 Identities=15% Similarity=0.064 Sum_probs=71.2
Q ss_pred CCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecChHHHHHHH----hCCCcEEEeCCccchhHHHHHHHhcC
Q psy14589 105 PLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL--TVFASVGCPVGVAKAY----GLGADYVVDHTIRELDRFANQILSYG 178 (655)
Q Consensus 105 ~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga--~Viat~~s~~k~~~a~----~LGAd~vId~~~~~~~d~~~~i~~~~ 178 (655)
.++ .+|++|+=.|. |-|.+++-||++.|. +|+.....++..+.|+ +.|....+..... |..+.+...
T Consensus 90 ~gi-~pg~rVlEAGt--GSG~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~~---Dv~~~~~~~- 162 (256)
T COG2519 90 LGI-SPGSRVLEAGT--GSGALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKLG---DVREGIDEE- 162 (256)
T ss_pred cCC-CCCCEEEEccc--CchHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEec---ccccccccc-
Confidence 456 79999998776 677899999998875 8999999998887774 3455553333322 333222221
Q ss_pred CCeeEEEeCCCcchHHHHHHHHHHhccccceEEEe
Q psy14589 179 SELDADHPGFTDPVYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 179 ~gvDvV~D~vG~~~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
.+|+|+=-...+ |+.++.+.++|++||+++.+.
T Consensus 163 -~vDav~LDmp~P-W~~le~~~~~Lkpgg~~~~y~ 195 (256)
T COG2519 163 -DVDAVFLDLPDP-WNVLEHVSDALKPGGVVVVYS 195 (256)
T ss_pred -ccCEEEEcCCCh-HHHHHHHHHHhCCCcEEEEEc
Confidence 689877555544 566999999999999988864
No 437
>PRK07041 short chain dehydrogenase; Provisional
Probab=94.65 E-value=0.17 Score=50.52 Aligned_cols=73 Identities=23% Similarity=0.182 Sum_probs=49.1
Q ss_pred EEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHH-hC--CC-cEE--EeCCccchhHHHHHHHhcCCCeeEEEeCC
Q psy14589 115 FIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAY-GL--GA-DYV--VDHTIRELDRFANQILSYGSELDADHPGF 188 (655)
Q Consensus 115 LI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~-~L--GA-d~v--Id~~~~~~~d~~~~i~~~~~gvDvV~D~v 188 (655)
+|+||+|++|...++.....|++|+++++++++.+.+. .+ |. .++ .|..+. +++.+.+.+ .+++|+++.++
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~--~~~~~~~~~-~~~id~li~~a 77 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDE--AAVDAFFAE-AGPFDHVVITA 77 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCH--HHHHHHHHh-cCCCCEEEECC
Confidence 58999999999988877778999999999877655432 22 22 122 244432 234444433 34689999988
Q ss_pred Cc
Q psy14589 189 TD 190 (655)
Q Consensus 189 G~ 190 (655)
|.
T Consensus 78 g~ 79 (230)
T PRK07041 78 AD 79 (230)
T ss_pred CC
Confidence 75
No 438
>PLN00015 protochlorophyllide reductase
Probab=94.64 E-value=0.12 Score=54.73 Aligned_cols=76 Identities=22% Similarity=0.228 Sum_probs=49.7
Q ss_pred EEEcCCCchHHHHHHHHHHcC-CeEEEEecChHHHHHH-HhCCC--cE----EEeCCccc-hhHHHHHHHhcCCCeeEEE
Q psy14589 115 FIIGANRGNGLAAIQVGKAYG-LTVFASVGCPVGVAKA-YGLGA--DY----VVDHTIRE-LDRFANQILSYGSELDADH 185 (655)
Q Consensus 115 LI~GasGgVG~~avQlAk~~G-a~Viat~~s~~k~~~a-~~LGA--d~----vId~~~~~-~~d~~~~i~~~~~gvDvV~ 185 (655)
+|+||++|||..+++.....| ++|+.+++++++.+.+ .+++. .. .+|..+.. ...+.+.+.+..+++|+++
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI 80 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV 80 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 589999999999887777789 8999999888776544 33331 11 23554431 1223334443344799999
Q ss_pred eCCCc
Q psy14589 186 PGFTD 190 (655)
Q Consensus 186 D~vG~ 190 (655)
.++|.
T Consensus 81 nnAG~ 85 (308)
T PLN00015 81 CNAAV 85 (308)
T ss_pred ECCCc
Confidence 98874
No 439
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=94.64 E-value=0.28 Score=50.12 Aligned_cols=99 Identities=11% Similarity=-0.018 Sum_probs=69.7
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHHcC--CeEEEEecChHHHHHHH----hCCCcEEEeCCc-cchhHHHHHHHh-cCCC
Q psy14589 109 PEPDTLFIIGANRGNGLAAIQVGKAYG--LTVFASVGCPVGVAKAY----GLGADYVVDHTI-RELDRFANQILS-YGSE 180 (655)
Q Consensus 109 ~~Gd~VLI~GasGgVG~~avQlAk~~G--a~Viat~~s~~k~~~a~----~LGAd~vId~~~-~~~~d~~~~i~~-~~~g 180 (655)
..+.+||=.|. ++|..++.+|..+. .+++++++++++.+.|+ +.|.+..|..-. . +..+.+.+ ..+.
T Consensus 58 ~~~k~iLEiGT--~~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~g---dal~~l~~~~~~~ 132 (219)
T COG4122 58 SGPKRILEIGT--AIGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLGG---DALDVLSRLLDGS 132 (219)
T ss_pred cCCceEEEeec--ccCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEecC---cHHHHHHhccCCC
Confidence 45678887785 67778888888875 58999999999988875 478777432211 1 34455554 3458
Q ss_pred eeEEEeCCCcc-hHHHHHHHHHHhccccceEEE
Q psy14589 181 LDADHPGFTDP-VYRARRKYFADLAFNYKHFFF 212 (655)
Q Consensus 181 vDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v 212 (655)
+|+||--.... ..+-++.++++|++||-+|.=
T Consensus 133 fDliFIDadK~~yp~~le~~~~lLr~GGliv~D 165 (219)
T COG4122 133 FDLVFIDADKADYPEYLERALPLLRPGGLIVAD 165 (219)
T ss_pred ccEEEEeCChhhCHHHHHHHHHHhCCCcEEEEe
Confidence 99986444444 335589999999999987764
No 440
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=94.63 E-value=0.18 Score=50.73 Aligned_cols=79 Identities=18% Similarity=0.014 Sum_probs=48.2
Q ss_pred CEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChH-HH-HHHHhC---CCc-EE--EeCCccc-hhHHHHHHHhcCCCee
Q psy14589 112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPV-GV-AKAYGL---GAD-YV--VDHTIRE-LDRFANQILSYGSELD 182 (655)
Q Consensus 112 d~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~-k~-~~a~~L---GAd-~v--Id~~~~~-~~d~~~~i~~~~~gvD 182 (655)
++|+|+|++|++|..+++.....|++|+++++++. .. +....+ +.. .+ .|..+.. ..+..+.+.+..+++|
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id 82 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVD 82 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 47999999999999998877778999999988743 11 122222 221 12 2333321 1122233333334799
Q ss_pred EEEeCCCc
Q psy14589 183 ADHPGFTD 190 (655)
Q Consensus 183 vV~D~vG~ 190 (655)
+++.+.|.
T Consensus 83 ~vi~~ag~ 90 (245)
T PRK12824 83 ILVNNAGI 90 (245)
T ss_pred EEEECCCC
Confidence 99998874
No 441
>PLN00016 RNA-binding protein; Provisional
Probab=94.63 E-value=0.19 Score=55.00 Aligned_cols=97 Identities=12% Similarity=0.002 Sum_probs=61.1
Q ss_pred CCCEEEEE----cCCCchHHHHHHHHHHcCCeEEEEecChHHHHH-----------HHhCCCcEEEeCCccchhHHHHHH
Q psy14589 110 EPDTLFII----GANRGNGLAAIQVGKAYGLTVFASVGCPVGVAK-----------AYGLGADYVVDHTIRELDRFANQI 174 (655)
Q Consensus 110 ~Gd~VLI~----GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~-----------a~~LGAd~vId~~~~~~~d~~~~i 174 (655)
...+|||+ ||+|-||..+++.+...|.+|+++++++.+... +...|+..+.- + ..++.+.+
T Consensus 51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~--D--~~d~~~~~ 126 (378)
T PLN00016 51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWG--D--PADVKSKV 126 (378)
T ss_pred ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEe--c--HHHHHhhh
Confidence 45689999 999999999998887889999999987654221 22345544321 1 11322222
Q ss_pred HhcCCCeeEEEeCCCcchHHHHHHHHHHhcccc--ceEEEe
Q psy14589 175 LSYGSELDADHPGFTDPVYRARRKYFADLAFNY--KHFFFF 213 (655)
Q Consensus 175 ~~~~~gvDvV~D~vG~~~~~~l~~~l~~l~~gG--rlv~v~ 213 (655)
. ..++|+|+++.|... ......+++++..| ++|.++
T Consensus 127 -~-~~~~d~Vi~~~~~~~-~~~~~ll~aa~~~gvkr~V~~S 164 (378)
T PLN00016 127 -A-GAGFDVVYDNNGKDL-DEVEPVADWAKSPGLKQFLFCS 164 (378)
T ss_pred -c-cCCccEEEeCCCCCH-HHHHHHHHHHHHcCCCEEEEEc
Confidence 1 237999999987652 12445566665444 555554
No 442
>TIGR01124 ilvA_2Cterm threonine ammonia-lyase, biosynthetic, long form. Forms scoring between the trusted and noise cutoff tend to branch with this subgroup of threonine ammonia-lyase phylogenetically but have only a single copy of the C-terminal domain.
Probab=94.60 E-value=1 Score=51.58 Aligned_cols=72 Identities=11% Similarity=0.137 Sum_probs=54.0
Q ss_pred CeEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecC--CchHHHHHHHHHccCCcEEEecC
Q psy14589 260 LFDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAP--GGDLSSVIESLRSSCSYINIISR 336 (655)
Q Consensus 260 ~ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg--~~~v~~~l~~L~~~~~~v~iLGs 336 (655)
....+.+++++ +||+|.++++.+.. -|++.++=|-..... =..+|.++. .+.+.++++.|+...-.+..+..
T Consensus 324 re~~l~V~iPe-rPGal~~f~~~i~~--~nItef~yr~~~~~~--a~v~vgie~~~~~~~~~l~~~L~~~Gy~~~dls~ 397 (499)
T TIGR01124 324 REALLAVTIPE-QPGSFLKFCELLGN--RNITEFNYRYADRKD--AHIFVGVQLSNPQERQEILARLNDGGYSVVDLTD 397 (499)
T ss_pred CEEEEEEEeCC-CCCHHHHHHHHhhh--cceEEEEEEecCCCe--EEEEEEEEeCCHHHHHHHHHHHHHcCCCeEECCC
Confidence 36778889998 99999999999986 588888877544333 334555554 57888999999887766666644
No 443
>PLN02686 cinnamoyl-CoA reductase
Probab=94.60 E-value=0.17 Score=55.22 Aligned_cols=45 Identities=20% Similarity=0.112 Sum_probs=37.3
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh
Q psy14589 109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG 153 (655)
Q Consensus 109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~ 153 (655)
..+++|||+||+|.||..+++.....|++|++++++.++.+.+++
T Consensus 51 ~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~~ 95 (367)
T PLN02686 51 AEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLRE 95 (367)
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 478899999999999999999888889999888777665544443
No 444
>PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA []. ; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A.
Probab=94.59 E-value=0.073 Score=55.30 Aligned_cols=102 Identities=20% Similarity=0.124 Sum_probs=65.4
Q ss_pred CCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC--eEEEEecChHHHHHHH----hCCCcEEEeCCccchhHHHH-HHH-h
Q psy14589 105 PLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL--TVFASVGCPVGVAKAY----GLGADYVVDHTIRELDRFAN-QIL-S 176 (655)
Q Consensus 105 ~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga--~Viat~~s~~k~~~a~----~LGAd~vId~~~~~~~d~~~-~i~-~ 176 (655)
.++ .+|++|+=.|. |-|.+...+|++.|- +|+..+..+++.+.|+ ..|.+..+.-... |+.+ ... +
T Consensus 36 l~i-~pG~~VlEaGt--GSG~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~---Dv~~~g~~~~ 109 (247)
T PF08704_consen 36 LDI-RPGSRVLEAGT--GSGSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHR---DVCEEGFDEE 109 (247)
T ss_dssp TT---TT-EEEEE----TTSHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES----GGCG--STT
T ss_pred cCC-CCCCEEEEecC--CcHHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEec---ceeccccccc
Confidence 456 79999998775 677899999999874 9999999998887774 4565432221111 2211 111 1
Q ss_pred cCCCeeEEEeCCCcchHHHHHHHHHHh-ccccceEEEe
Q psy14589 177 YGSELDADHPGFTDPVYRARRKYFADL-AFNYKHFFFF 213 (655)
Q Consensus 177 ~~~gvDvV~D~vG~~~~~~l~~~l~~l-~~gGrlv~v~ 213 (655)
....+|.||=-+..+ |+.+..+.++| ++||++..+.
T Consensus 110 ~~~~~DavfLDlp~P-w~~i~~~~~~L~~~gG~i~~fs 146 (247)
T PF08704_consen 110 LESDFDAVFLDLPDP-WEAIPHAKRALKKPGGRICCFS 146 (247)
T ss_dssp -TTSEEEEEEESSSG-GGGHHHHHHHE-EEEEEEEEEE
T ss_pred ccCcccEEEEeCCCH-HHHHHHHHHHHhcCCceEEEEC
Confidence 123789987666666 23489999999 8999998864
No 445
>PRK08198 threonine dehydratase; Provisional
Probab=94.57 E-value=0.8 Score=50.85 Aligned_cols=72 Identities=14% Similarity=0.229 Sum_probs=53.4
Q ss_pred eEEEEEEccCCCcchHHHHHHHHHhCCcceeeeeccc-CCC-CCcceEEEEEecC--CchHHHHHHHHHccCCcEEE
Q psy14589 261 FDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRS-STR-IENNYEFMVECAP--GGDLSSVIESLRSSCSYINI 333 (655)
Q Consensus 261 ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP-~~~-~~~~Y~FfVd~eg--~~~v~~~l~~L~~~~~~v~i 333 (655)
..++.+.+++ +||+|.++++.+++.+.|+..|.-.. ..+ ..+.-.+.|.+|. .+.++++++.|++..-.+++
T Consensus 327 ~~~l~v~l~D-~PG~L~~ll~~i~~~g~NI~~i~~~~~~~~~~~~~~~v~v~ie~~~~~~~~~l~~~L~~~G~~v~~ 402 (404)
T PRK08198 327 YLKLRVRLPD-RPGQLAKLLSIIAELGANVIDVDHDRFSPDLRLGEVEVELTLETRGPEHIEEILDALRDAGYEVKV 402 (404)
T ss_pred EEEEEEEeCC-CCCHHHHHHHHHhhCCCceEEEEEEEccCCCCCceEEEEEEEEeCCHHHHHHHHHHHHHCCCeEEE
Confidence 5688888998 99999999999999999998886543 322 2345556666665 34678899999877555544
No 446
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]
Probab=94.52 E-value=0.19 Score=52.01 Aligned_cols=102 Identities=17% Similarity=0.148 Sum_probs=68.4
Q ss_pred cCCCCCCCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHh----CCCcEEEeCCccchhHHHHHHHhc
Q psy14589 103 SKPLYTPEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYG----LGADYVVDHTIRELDRFANQILSY 177 (655)
Q Consensus 103 ~~~~l~~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~----LGAd~vId~~~~~~~d~~~~i~~~ 177 (655)
..... ++|++||=.|+ |.|-+++.+++..|- +|+++|.|++-++.+++ .|... +.+... | ++.+. .
T Consensus 45 ~~~~~-~~g~~vLDva~--GTGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~-i~fv~~---d-Ae~LP-f 115 (238)
T COG2226 45 SLLGI-KPGDKVLDVAC--GTGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQN-VEFVVG---D-AENLP-F 115 (238)
T ss_pred HhhCC-CCCCEEEEecC--CccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccc-eEEEEe---c-hhhCC-C
Confidence 33444 58999995554 788899999999874 89999999987777653 34332 222221 1 11111 1
Q ss_pred -CCCeeEEEeCCCcc----hHHHHHHHHHHhccccceEEEe
Q psy14589 178 -GSELDADHPGFTDP----VYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 178 -~~gvDvV~D~vG~~----~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
.+.+|+|.-+.|=. ...++.++.+.|+|||+++..-
T Consensus 116 ~D~sFD~vt~~fglrnv~d~~~aL~E~~RVlKpgG~~~vle 156 (238)
T COG2226 116 PDNSFDAVTISFGLRNVTDIDKALKEMYRVLKPGGRLLVLE 156 (238)
T ss_pred CCCccCEEEeeehhhcCCCHHHHHHHHHHhhcCCeEEEEEE
Confidence 22688887665543 2356899999999999998874
No 447
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=94.49 E-value=0.17 Score=50.52 Aligned_cols=77 Identities=21% Similarity=0.161 Sum_probs=48.3
Q ss_pred EEEEcCCCchHHHHHHHHHHcCCeEEEEecCh-HHH----HHHHhCCCcE---EEeCCccc-hhHHHHHHHhcCCCeeEE
Q psy14589 114 LFIIGANRGNGLAAIQVGKAYGLTVFASVGCP-VGV----AKAYGLGADY---VVDHTIRE-LDRFANQILSYGSELDAD 184 (655)
Q Consensus 114 VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~-~k~----~~a~~LGAd~---vId~~~~~-~~d~~~~i~~~~~gvDvV 184 (655)
|+|+|++|++|..+++.....|++|++++++. ++. +.+.+.|+.. ..|..+.. .+.+.+.+.+.-+++|+|
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL 80 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 58999999999999988877899999988764 222 2234455421 23444321 011222233222478999
Q ss_pred EeCCCc
Q psy14589 185 HPGFTD 190 (655)
Q Consensus 185 ~D~vG~ 190 (655)
+.+.|.
T Consensus 81 i~~ag~ 86 (239)
T TIGR01830 81 VNNAGI 86 (239)
T ss_pred EECCCC
Confidence 998885
No 448
>cd04887 ACT_MalLac-Enz ACT_MalLac-Enz CD includes the N-terminal ACT domain of putative NAD-dependent malic enzyme 1, Bacillus subtilis YqkI and related domains. The ACT_MalLac-Enz CD includes the N-terminal ACT domain of putative NAD-dependent malic enzyme 1, Bacillus subtilis YqkI, a malolactic enzyme (MalLac-Enz) which converts malate to lactate, and other related ACT domains. The yqkJ product is predicted to convert malate directly to lactate, as opposed to related malic enzymes that convert malate to pyruvate. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=94.47 E-value=0.13 Score=42.34 Aligned_cols=65 Identities=9% Similarity=0.109 Sum_probs=47.6
Q ss_pred EEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecCCchHHHHHHHHHccCC
Q psy14589 264 VIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGGDLSSVIESLRSSCS 329 (655)
Q Consensus 264 l~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg~~~v~~~l~~L~~~~~ 329 (655)
+.+...+ ++|.|+++.+.+++.|+|+..++++..........|-+++...+.+.++++.|++.-.
T Consensus 2 l~v~~~d-~~g~L~~i~~~i~~~~~nI~~v~~~~~~~~~~~~~~~vev~~~~~l~~i~~~L~~i~g 66 (74)
T cd04887 2 LRLELPN-RPGMLGRVTTAIGEAGGDIGAIDLVEQGRDYTVRDITVDAPSEEHAETIVAAVRALPE 66 (74)
T ss_pred EEEEeCC-CCchHHHHHHHHHHcCCcEEEEEEEEecCCEEEEEEEEEcCCHHHHHHHHHHHhcCCC
Confidence 4455666 8999999999999999999999987644333333444444446788889999887643
No 449
>PRK12827 short chain dehydrogenase; Provisional
Probab=94.47 E-value=0.26 Score=49.51 Aligned_cols=79 Identities=15% Similarity=-0.048 Sum_probs=48.7
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEec----ChHHHHHH----HhCCCcE-E--EeCCccchhHHHH---HHH
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVG----CPVGVAKA----YGLGADY-V--VDHTIRELDRFAN---QIL 175 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~----s~~k~~~a----~~LGAd~-v--Id~~~~~~~d~~~---~i~ 175 (655)
.+.+++|+||+|++|...++.....|++|+++++ ++++.+.+ ...|... + .|..+. +++.+ .+.
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~--~~~~~~~~~~~ 82 (249)
T PRK12827 5 DSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDF--AATRAALDAGV 82 (249)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCH--HHHHHHHHHHH
Confidence 5678999999999999988877788999988654 23333222 2334332 2 233332 12222 222
Q ss_pred hcCCCeeEEEeCCCc
Q psy14589 176 SYGSELDADHPGFTD 190 (655)
Q Consensus 176 ~~~~gvDvV~D~vG~ 190 (655)
+..+++|.++.++|.
T Consensus 83 ~~~~~~d~vi~~ag~ 97 (249)
T PRK12827 83 EEFGRLDILVNNAGI 97 (249)
T ss_pred HHhCCCCEEEECCCC
Confidence 222478999998874
No 450
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=94.46 E-value=0.15 Score=54.63 Aligned_cols=77 Identities=12% Similarity=0.007 Sum_probs=49.8
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHH-----HHHHHh----CCC--cEE-EeCCccchhHHHHHHHhc
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVG-----VAKAYG----LGA--DYV-VDHTIRELDRFANQILSY 177 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k-----~~~a~~----LGA--d~v-Id~~~~~~~d~~~~i~~~ 177 (655)
+|.+|||+||+|.||..+++.....|.+|+++++++++ ++.+.. .+. ..+ .|..+. +++.+.+.+.
T Consensus 5 ~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~--~~~~~~~~~~ 82 (340)
T PLN02653 5 PRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDA--SSLRRWLDDI 82 (340)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCH--HHHHHHHHHc
Confidence 67899999999999999999888889999998875432 222211 111 111 344332 2333434332
Q ss_pred CCCeeEEEeCCCc
Q psy14589 178 GSELDADHPGFTD 190 (655)
Q Consensus 178 ~~gvDvV~D~vG~ 190 (655)
++|+|+.+++.
T Consensus 83 --~~d~Vih~A~~ 93 (340)
T PLN02653 83 --KPDEVYNLAAQ 93 (340)
T ss_pred --CCCEEEECCcc
Confidence 47999998874
No 451
>cd04883 ACT_AcuB C-terminal ACT domain of the Bacillus subtilis acetoin utilization protein, AcuB. This CD includes the C-terminal ACT domain of the Bacillus subtilis acetoin utilization protein, AcuB. AcuB is putatively involved in the anaerobic catabolism of acetoin, and related proteins. Studies report the induction of AcuB by nitrate respiration and also by fermentation. Since acetoin can be secreted and later serve as a source of carbon, it has been proposed that, during anaerobic growth when other carbon sources are exhausted, the induction of the AcuB protein results in acetoin catabolism. AcuB-like proteins have two N-terminal tandem CBS domains and a single C-terminal ACT domain. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=94.46 E-value=0.22 Score=40.69 Aligned_cols=63 Identities=22% Similarity=0.297 Sum_probs=44.6
Q ss_pred EEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecCCchHHHHHHHHHccC
Q psy14589 263 FVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGGDLSSVIESLRSSC 328 (655)
Q Consensus 263 sl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg~~~v~~~l~~L~~~~ 328 (655)
.+.+.+++ +||.|.++++.++++++|+..+...+... .......+.+++ ....++++.|++..
T Consensus 3 ~~~v~~~d-~pG~l~~i~~~l~~~~inI~~i~~~~~~~-~~~~~v~i~v~~-~~~~~~~~~L~~~G 65 (72)
T cd04883 3 QIEVRVPD-RPGQLADIAAIFKDRGVNIVSVLVYPSKE-EDNKILVFRVQT-MNPRPIIEDLRRAG 65 (72)
T ss_pred EEEEEECC-CCCHHHHHHHHHHHcCCCEEEEEEeccCC-CCeEEEEEEEec-CCHHHHHHHHHHCC
Confidence 45667777 89999999999999999999987655432 344556666665 11236677776653
No 452
>PRK07023 short chain dehydrogenase; Provisional
Probab=94.45 E-value=0.21 Score=50.57 Aligned_cols=76 Identities=14% Similarity=0.035 Sum_probs=47.9
Q ss_pred CEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcE---EEeCCccchhHHHHHHHh-----cC--CCe
Q psy14589 112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADY---VVDHTIRELDRFANQILS-----YG--SEL 181 (655)
Q Consensus 112 d~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~---vId~~~~~~~d~~~~i~~-----~~--~gv 181 (655)
.+++|+||+|+||..+++.....|++|++++++.++. .....|... ..|..+. +++.+.+.+ .. +++
T Consensus 2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~D~~~~--~~~~~~~~~~~~~~~~~~~~~ 78 (243)
T PRK07023 2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPS-LAAAAGERLAEVELDLSDA--AAAAAWLAGDLLAAFVDGASR 78 (243)
T ss_pred ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchh-hhhccCCeEEEEEeccCCH--HHHHHHHHHHHHHHhccCCCc
Confidence 3699999999999999988777899999998876542 223334321 1344432 233332221 11 267
Q ss_pred eEEEeCCCc
Q psy14589 182 DADHPGFTD 190 (655)
Q Consensus 182 DvV~D~vG~ 190 (655)
|+++.+.|.
T Consensus 79 ~~~v~~ag~ 87 (243)
T PRK07023 79 VLLINNAGT 87 (243)
T ss_pred eEEEEcCcc
Confidence 888887764
No 453
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=94.44 E-value=0.16 Score=54.07 Aligned_cols=93 Identities=12% Similarity=0.012 Sum_probs=68.8
Q ss_pred CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEE-EeCCccchhHHHHHHHhcCCCeeEEEeCC-
Q psy14589 111 PDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYV-VDHTIRELDRFANQILSYGSELDADHPGF- 188 (655)
Q Consensus 111 Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~v-Id~~~~~~~d~~~~i~~~~~gvDvV~D~v- 188 (655)
+-+|.|.|+ |-+|.-+..+|--+||+|...+.+.+|+..+..+=..++ .-+++. .++.+.+. +.|+++.++
T Consensus 168 ~~kv~iiGG-GvvgtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~--~~iee~v~----~aDlvIgaVL 240 (371)
T COG0686 168 PAKVVVLGG-GVVGTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTP--SNIEEAVK----KADLVIGAVL 240 (371)
T ss_pred CccEEEECC-ccccchHHHHHhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCH--HHHHHHhh----hccEEEEEEE
Confidence 345888898 999999999999999999999999999888865433332 223332 35555555 468877654
Q ss_pred --Ccc----hHHHHHHHHHHhccccceEEEe
Q psy14589 189 --TDP----VYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 189 --G~~----~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
|.. . .++.++.|++|+.+|=|.
T Consensus 241 IpgakaPkLv---t~e~vk~MkpGsVivDVA 268 (371)
T COG0686 241 IPGAKAPKLV---TREMVKQMKPGSVIVDVA 268 (371)
T ss_pred ecCCCCceeh---hHHHHHhcCCCcEEEEEE
Confidence 333 4 578899999999998883
No 454
>PRK01581 speE spermidine synthase; Validated
Probab=94.41 E-value=0.34 Score=53.11 Aligned_cols=98 Identities=21% Similarity=0.108 Sum_probs=63.1
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHHcC-CeEEEEecChHHHHHHHhC--------CC---cEEEeCCccchhHHHHHHHh
Q psy14589 109 PEPDTLFIIGANRGNGLAAIQVGKAYG-LTVFASVGCPVGVAKAYGL--------GA---DYVVDHTIRELDRFANQILS 176 (655)
Q Consensus 109 ~~Gd~VLI~GasGgVG~~avQlAk~~G-a~Viat~~s~~k~~~a~~L--------GA---d~vId~~~~~~~d~~~~i~~ 176 (655)
...++|||.|+ |.|..+..+++.-+ .+|++++.+++-.+.+++. |+ .++ .... .|..+.+.+
T Consensus 149 ~~PkrVLIIGg--GdG~tlrelLk~~~v~~It~VEIDpeVIelAr~~~~L~~~~~~~~~DpRV-~vvi---~Da~~fL~~ 222 (374)
T PRK01581 149 IDPKRVLILGG--GDGLALREVLKYETVLHVDLVDLDGSMINMARNVPELVSLNKSAFFDNRV-NVHV---CDAKEFLSS 222 (374)
T ss_pred CCCCEEEEECC--CHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHHhccccchhccccCCCCce-EEEE---CcHHHHHHh
Confidence 35679999996 56667777787655 4899999999888888852 11 111 1111 144555555
Q ss_pred cCCCeeEEEeCCCcc---------hHHHHHHHHHHhccccceEEE
Q psy14589 177 YGSELDADHPGFTDP---------VYRARRKYFADLAFNYKHFFF 212 (655)
Q Consensus 177 ~~~gvDvV~D~vG~~---------~~~~l~~~l~~l~~gGrlv~v 212 (655)
..+.+|+|+--...+ +-+-++.+.+.|++||.++.-
T Consensus 223 ~~~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPgGV~V~Q 267 (374)
T PRK01581 223 PSSLYDVIIIDFPDPATELLSTLYTSELFARIATFLTEDGAFVCQ 267 (374)
T ss_pred cCCCccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 445799986443211 112367888899999998765
No 455
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.36 E-value=0.15 Score=51.22 Aligned_cols=74 Identities=16% Similarity=0.068 Sum_probs=47.1
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCCC
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGFT 189 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG 189 (655)
.|.+++|+|++|+||...+......|++|+++++++.+.. .-.. ..+...-. +..+.+.+..+++|+++.+.|
T Consensus 4 ~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~---~~~~-~~~~~D~~---~~~~~~~~~~~~id~lv~~ag 76 (235)
T PRK06550 4 MTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDL---SGNF-HFLQLDLS---DDLEPLFDWVPSVDILCNTAG 76 (235)
T ss_pred CCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCccccc---CCcE-EEEECChH---HHHHHHHHhhCCCCEEEECCC
Confidence 5789999999999999999877778999999887653311 1011 11211111 112333333347899999887
Q ss_pred c
Q psy14589 190 D 190 (655)
Q Consensus 190 ~ 190 (655)
.
T Consensus 77 ~ 77 (235)
T PRK06550 77 I 77 (235)
T ss_pred C
Confidence 3
No 456
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=94.34 E-value=0.075 Score=60.15 Aligned_cols=79 Identities=18% Similarity=0.210 Sum_probs=56.2
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh---------------------HHHHHHHhCCCcEEEeCCccch
Q psy14589 109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCP---------------------VGVAKAYGLGADYVVDHTIREL 167 (655)
Q Consensus 109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~---------------------~k~~~a~~LGAd~vId~~~~~~ 167 (655)
+.|++|+|.|+ |+.|+.++..++..|.+|+..+..+ ...+.++++|++..++..-..
T Consensus 139 ~~~~~V~IIG~-GpaGl~aA~~l~~~G~~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~~- 216 (467)
T TIGR01318 139 PTGKRVAVIGA-GPAGLACADILARAGVQVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVGR- 216 (467)
T ss_pred CCCCeEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeCC-
Confidence 36899999999 9999999999999999988877553 235667889988766543210
Q ss_pred hHHHHHHHhcCCCeeEEEeCCCcch
Q psy14589 168 DRFANQILSYGSELDADHPGFTDPV 192 (655)
Q Consensus 168 ~d~~~~i~~~~~gvDvV~D~vG~~~ 192 (655)
++ .+.+...++|.|+.++|...
T Consensus 217 -~~--~~~~~~~~~D~vilAtGa~~ 238 (467)
T TIGR01318 217 -DI--SLDDLLEDYDAVFLGVGTYR 238 (467)
T ss_pred -cc--CHHHHHhcCCEEEEEeCCCC
Confidence 11 01111126899999999863
No 457
>PLN02781 Probable caffeoyl-CoA O-methyltransferase
Probab=94.31 E-value=0.3 Score=50.26 Aligned_cols=99 Identities=11% Similarity=0.004 Sum_probs=63.6
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHHc--CCeEEEEecChHHHHHHH----hCCCcEEEeCCccchhHHHHHHHhc-----
Q psy14589 109 PEPDTLFIIGANRGNGLAAIQVGKAY--GLTVFASVGCPVGVAKAY----GLGADYVVDHTIRELDRFANQILSY----- 177 (655)
Q Consensus 109 ~~Gd~VLI~GasGgVG~~avQlAk~~--Ga~Viat~~s~~k~~~a~----~LGAd~vId~~~~~~~d~~~~i~~~----- 177 (655)
..+++||-.|. +.|..++.+|+++ +.+|++++.+++..+.++ +.|.+.-|..... +..+.+.+.
T Consensus 67 ~~~~~vLEiGt--~~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~g---da~~~L~~l~~~~~ 141 (234)
T PLN02781 67 MNAKNTLEIGV--FTGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQS---DALSALDQLLNNDP 141 (234)
T ss_pred hCCCEEEEecC--cccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc---cHHHHHHHHHhCCC
Confidence 46778998886 5566666677765 359999999998877764 3565433332222 233333322
Q ss_pred CCCeeEEEeCCCcc-hHHHHHHHHHHhccccceEEE
Q psy14589 178 GSELDADHPGFTDP-VYRARRKYFADLAFNYKHFFF 212 (655)
Q Consensus 178 ~~gvDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v 212 (655)
.+.+|+|+-....+ ..+.++.+++.+++||.++.-
T Consensus 142 ~~~fD~VfiDa~k~~y~~~~~~~~~ll~~GG~ii~d 177 (234)
T PLN02781 142 KPEFDFAFVDADKPNYVHFHEQLLKLVKVGGIIAFD 177 (234)
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 23799987544333 224478899999999987764
No 458
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=94.31 E-value=0.26 Score=54.16 Aligned_cols=88 Identities=14% Similarity=0.050 Sum_probs=52.8
Q ss_pred EEEEcCCCchHHHHHHHHHHcC-C-eEEEEecChHHHHHHHh--CC--Cc-EEEeCCccchhHHHHHHHhcCCCeeEEEe
Q psy14589 114 LFIIGANRGNGLAAIQVGKAYG-L-TVFASVGCPVGVAKAYG--LG--AD-YVVDHTIRELDRFANQILSYGSELDADHP 186 (655)
Q Consensus 114 VLI~GasGgVG~~avQlAk~~G-a-~Viat~~s~~k~~~a~~--LG--Ad-~vId~~~~~~~d~~~~i~~~~~gvDvV~D 186 (655)
|+|.|+ |.+|..+++.+...+ . +|++.+++.++.+.+.+ .+ .. ..+|..+. ++ +.+.-.+.|+|++
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~----l~~~~~~~dvVin 73 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDP--ES----LAELLRGCDVVIN 73 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTH--HH----HHHHHTTSSEEEE
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCH--HH----HHHHHhcCCEEEE
Confidence 789999 999999999877765 4 89999999999777653 22 11 22344332 12 3333235699999
Q ss_pred CCCcchHHHHHHHHHH-hccccceEE
Q psy14589 187 GFTDPVYRARRKYFAD-LAFNYKHFF 211 (655)
Q Consensus 187 ~vG~~~~~~l~~~l~~-l~~gGrlv~ 211 (655)
|+|... ....+++ ++.|-..|-
T Consensus 74 ~~gp~~---~~~v~~~~i~~g~~yvD 96 (386)
T PF03435_consen 74 CAGPFF---GEPVARACIEAGVHYVD 96 (386)
T ss_dssp -SSGGG---HHHHHHHHHHHT-EEEE
T ss_pred CCccch---hHHHHHHHHHhCCCeec
Confidence 999874 3444444 444444444
No 459
>PRK14103 trans-aconitate 2-methyltransferase; Provisional
Probab=94.28 E-value=0.38 Score=49.71 Aligned_cols=93 Identities=15% Similarity=0.052 Sum_probs=64.6
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeC
Q psy14589 109 PEPDTLFIIGANRGNGLAAIQVGKAY-GLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPG 187 (655)
Q Consensus 109 ~~Gd~VLI~GasGgVG~~avQlAk~~-Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~ 187 (655)
.++++||=.|+ |.|..+..+++.. +++|++++.++.-.+.+++.+.+.+. . +..+ +. ..+.+|+|+-.
T Consensus 28 ~~~~~vLDlGc--G~G~~~~~l~~~~p~~~v~gvD~s~~~~~~a~~~~~~~~~-~------d~~~-~~-~~~~fD~v~~~ 96 (255)
T PRK14103 28 ERARRVVDLGC--GPGNLTRYLARRWPGAVIEALDSSPEMVAAARERGVDART-G------DVRD-WK-PKPDTDVVVSN 96 (255)
T ss_pred CCCCEEEEEcC--CCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHhcCCcEEE-c------Chhh-CC-CCCCceEEEEe
Confidence 57899998887 4467788888875 67999999999888888877655332 1 2211 11 12368998864
Q ss_pred CCc----chHHHHHHHHHHhccccceEEE
Q psy14589 188 FTD----PVYRARRKYFADLAFNYKHFFF 212 (655)
Q Consensus 188 vG~----~~~~~l~~~l~~l~~gGrlv~v 212 (655)
..- +..+.+....+.|++||++++.
T Consensus 97 ~~l~~~~d~~~~l~~~~~~LkpgG~l~~~ 125 (255)
T PRK14103 97 AALQWVPEHADLLVRWVDELAPGSWIAVQ 125 (255)
T ss_pred hhhhhCCCHHHHHHHHHHhCCCCcEEEEE
Confidence 421 1123477888999999998875
No 460
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=94.28 E-value=0.12 Score=54.67 Aligned_cols=38 Identities=24% Similarity=0.155 Sum_probs=33.2
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHH
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVG 147 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k 147 (655)
.|.+|||+||+|.||..++......|.+|++++++.++
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~ 40 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPND 40 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCc
Confidence 57899999999999999998888889999988877544
No 461
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=94.25 E-value=0.8 Score=46.10 Aligned_cols=90 Identities=11% Similarity=-0.045 Sum_probs=56.0
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChH-HHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCC
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPV-GVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGF 188 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~-k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~v 188 (655)
.|.+|+|.|+ |.+|...++.....|++|++++.... .+..+.+.|.-... ... +...- -.++|+|+-++
T Consensus 9 ~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~~~~i~~~-~~~-----~~~~~---l~~adlViaaT 78 (202)
T PRK06718 9 SNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPELTENLVKLVEEGKIRWK-QKE-----FEPSD---IVDAFLVIAAT 78 (202)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHhCCCEEEE-ecC-----CChhh---cCCceEEEEcC
Confidence 7889999999 99999888877778999887765321 22222222322221 111 11110 12689999999
Q ss_pred CcchHHHHHHHHHHhccccceEEE
Q psy14589 189 TDPVYRARRKYFADLAFNYKHFFF 212 (655)
Q Consensus 189 G~~~~~~l~~~l~~l~~gGrlv~v 212 (655)
+.+. ++..+...+..+.++-+
T Consensus 79 ~d~e---lN~~i~~~a~~~~lvn~ 99 (202)
T PRK06718 79 NDPR---VNEQVKEDLPENALFNV 99 (202)
T ss_pred CCHH---HHHHHHHHHHhCCcEEE
Confidence 9886 66666655555666554
No 462
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=94.25 E-value=0.43 Score=51.65 Aligned_cols=88 Identities=23% Similarity=0.152 Sum_probs=59.4
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCCC
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGFT 189 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG 189 (655)
.|.+|.|.|. |.||.+.++.+|..|++|+..++++. .+..+..++..+ ++.+.+. ..|++.-.++
T Consensus 145 ~gktvGIiG~-GrIG~avA~r~~~Fgm~v~y~~~~~~-~~~~~~~~~~y~---------~l~ell~----~sDii~l~~P 209 (324)
T COG1052 145 RGKTLGIIGL-GRIGQAVARRLKGFGMKVLYYDRSPN-PEAEKELGARYV---------DLDELLA----ESDIISLHCP 209 (324)
T ss_pred CCCEEEEECC-CHHHHHHHHHHhcCCCEEEEECCCCC-hHHHhhcCceec---------cHHHHHH----hCCEEEEeCC
Confidence 6999999999 99999999999999999999988765 334455555543 1222233 2477655443
Q ss_pred c-c-hHHHH-HHHHHHhccccceEEE
Q psy14589 190 D-P-VYRAR-RKYFADLAFNYKHFFF 212 (655)
Q Consensus 190 ~-~-~~~~l-~~~l~~l~~gGrlv~v 212 (655)
. + ++..+ ...++.|++|+.+|=+
T Consensus 210 lt~~T~hLin~~~l~~mk~ga~lVNt 235 (324)
T COG1052 210 LTPETRHLINAEELAKMKPGAILVNT 235 (324)
T ss_pred CChHHhhhcCHHHHHhCCCCeEEEEC
Confidence 3 3 22222 4667788887766654
No 463
>PLN02476 O-methyltransferase
Probab=94.22 E-value=0.3 Score=51.69 Aligned_cols=102 Identities=10% Similarity=-0.032 Sum_probs=66.4
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHHc--CCeEEEEecChHHHHHHH----hCCCcEEEeCCccchhHHHHHHHhc--CCC
Q psy14589 109 PEPDTLFIIGANRGNGLAAIQVGKAY--GLTVFASVGCPVGVAKAY----GLGADYVVDHTIRELDRFANQILSY--GSE 180 (655)
Q Consensus 109 ~~Gd~VLI~GasGgVG~~avQlAk~~--Ga~Viat~~s~~k~~~a~----~LGAd~vId~~~~~~~d~~~~i~~~--~~g 180 (655)
..+++||=.|. ++|..++.+|+.+ +.+|++++.+++..+.++ +.|..+-|+....+..+....+.+. .+.
T Consensus 117 ~~ak~VLEIGT--~tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~GdA~e~L~~l~~~~~~~~ 194 (278)
T PLN02476 117 LGAERCIEVGV--YTGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKHGLAAESLKSMIQNGEGSS 194 (278)
T ss_pred cCCCeEEEecC--CCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcccCCC
Confidence 46789998886 6777788888887 458999999998877774 4676543433322111222222211 237
Q ss_pred eeEEEeCCCcc-hHHHHHHHHHHhccccceEEE
Q psy14589 181 LDADHPGFTDP-VYRARRKYFADLAFNYKHFFF 212 (655)
Q Consensus 181 vDvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v 212 (655)
+|.||--.... ..+-++.+++.|++||.+|.=
T Consensus 195 FD~VFIDa~K~~Y~~y~e~~l~lL~~GGvIV~D 227 (278)
T PLN02476 195 YDFAFVDADKRMYQDYFELLLQLVRVGGVIVMD 227 (278)
T ss_pred CCEEEECCCHHHHHHHHHHHHHhcCCCcEEEEe
Confidence 99986444443 335588999999999987763
No 464
>PRK11790 D-3-phosphoglycerate dehydrogenase; Provisional
Probab=94.19 E-value=4.7 Score=45.08 Aligned_cols=35 Identities=20% Similarity=0.140 Sum_probs=32.2
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCP 145 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~ 145 (655)
.|.+|.|.|. |.||...++.++.+|.+|++.++.+
T Consensus 150 ~gktvGIiG~-G~IG~~vA~~~~~fGm~V~~~d~~~ 184 (409)
T PRK11790 150 RGKTLGIVGY-GHIGTQLSVLAESLGMRVYFYDIED 184 (409)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCc
Confidence 7889999999 9999999999999999999988653
No 465
>COG4492 PheB ACT domain-containing protein [General function prediction only]
Probab=94.18 E-value=0.21 Score=46.58 Aligned_cols=75 Identities=20% Similarity=0.342 Sum_probs=62.4
Q ss_pred CeEEEEEEccCCCcchHHHHHHHHHhCCcceeee-ecccCCCCCcceEEEEEecC-CchHHHHHHHHHcc--CCcEEEec
Q psy14589 260 LFDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHI-ESRSSTRIENNYEFMVECAP-GGDLSSVIESLRSS--CSYINIIS 335 (655)
Q Consensus 260 ~ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~I-eSRP~~~~~~~Y~FfVd~eg-~~~v~~~l~~L~~~--~~~v~iLG 335 (655)
...++.+.+.+ +.|.|+++|..+++.++|+..| ++-|..+.. +-...+|..+ +..+.+++++|++. -..+.++|
T Consensus 71 ri~TL~l~led-r~G~LS~vLd~iA~~~~nvLTI~Q~ipl~g~A-nvtlsi~~ssm~~~V~~ii~kl~k~e~V~kVeivg 148 (150)
T COG4492 71 RIITLSLSLED-RVGILSDVLDVIAREEINVLTIHQTIPLQGRA-NVTLSIDTSSMEKDVDKIIEKLRKVEGVEKVEIVG 148 (150)
T ss_pred eEEEEEEEEhh-hhhhHHHHHHHHHHhCCcEEEEecccccCcee-eEEEEEEchhhhhhHHHHHHHHhcccceeEEEEee
Confidence 47889999999 9999999999999999998777 678877655 4667778877 88999999999976 35677777
Q ss_pred C
Q psy14589 336 R 336 (655)
Q Consensus 336 s 336 (655)
+
T Consensus 149 s 149 (150)
T COG4492 149 S 149 (150)
T ss_pred c
Confidence 6
No 466
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=94.18 E-value=0.24 Score=53.00 Aligned_cols=75 Identities=12% Similarity=-0.009 Sum_probs=47.9
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcC--CeEEEEecChHHHHHHH-hCCCc--EE--EeCCccchhHHHHHHHhcCCCee
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYG--LTVFASVGCPVGVAKAY-GLGAD--YV--VDHTIRELDRFANQILSYGSELD 182 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~G--a~Viat~~s~~k~~~a~-~LGAd--~v--Id~~~~~~~d~~~~i~~~~~gvD 182 (655)
.|.+|+|+||+|+||..+++.....| .+|+++++++.+...+. .+... .+ .|..+. +++.+.+. ++|
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~--~~l~~~~~----~iD 76 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDK--ERLTRALR----GVD 76 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCH--HHHHHHHh----cCC
Confidence 47899999999999999988666665 68988887765543332 23211 12 243332 22333332 589
Q ss_pred EEEeCCCc
Q psy14589 183 ADHPGFTD 190 (655)
Q Consensus 183 vV~D~vG~ 190 (655)
+|+.++|.
T Consensus 77 ~Vih~Ag~ 84 (324)
T TIGR03589 77 YVVHAAAL 84 (324)
T ss_pred EEEECccc
Confidence 99998874
No 467
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=94.17 E-value=0.27 Score=49.88 Aligned_cols=81 Identities=12% Similarity=0.001 Sum_probs=50.6
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHH--HHHHHhCC------CcEE--EeCCc-cc-hhHHHHHHHhc
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVG--VAKAYGLG------ADYV--VDHTI-RE-LDRFANQILSY 177 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k--~~~a~~LG------Ad~v--Id~~~-~~-~~d~~~~i~~~ 177 (655)
.+++++|+|+++|+|..++.-....|++|+++.++.++ .+.+.+.. .... .|.++ .. ...+.+.+.+.
T Consensus 4 ~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~~ 83 (251)
T COG1028 4 SGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEEE 83 (251)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHHH
Confidence 67899999999999998887666889998777766443 23332211 1111 45443 21 11233334443
Q ss_pred CCCeeEEEeCCCc
Q psy14589 178 GSELDADHPGFTD 190 (655)
Q Consensus 178 ~~gvDvV~D~vG~ 190 (655)
.+++|+++.++|.
T Consensus 84 ~g~id~lvnnAg~ 96 (251)
T COG1028 84 FGRIDILVNNAGI 96 (251)
T ss_pred cCCCCEEEECCCC
Confidence 4579999998885
No 468
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=94.17 E-value=0.097 Score=55.10 Aligned_cols=72 Identities=18% Similarity=0.087 Sum_probs=49.4
Q ss_pred EEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEE-EeCCccchhHHHHHHHhcCCCeeEEEeCCCc
Q psy14589 113 TLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYV-VDHTIRELDRFANQILSYGSELDADHPGFTD 190 (655)
Q Consensus 113 ~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~v-Id~~~~~~~d~~~~i~~~~~gvDvV~D~vG~ 190 (655)
+|+|+|++|.+|..+++.....|.+|+++++++++.......+...+ .|..+. +++.+.+ .++|+|+.+++.
T Consensus 2 ~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~--~~l~~~~----~~~d~vi~~a~~ 74 (328)
T TIGR03466 2 KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLEGLDVEIVEGDLRDP--ASLRKAV----AGCRALFHVAAD 74 (328)
T ss_pred eEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccccCCceEEEeeCCCH--HHHHHHH----hCCCEEEEecee
Confidence 69999999999999999888889999999987765443444454433 233332 1233323 257999988753
No 469
>PRK04435 hypothetical protein; Provisional
Probab=94.15 E-value=0.29 Score=46.82 Aligned_cols=76 Identities=18% Similarity=0.280 Sum_probs=57.6
Q ss_pred CeEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecC-CchHHHHHHHHHccC--CcEEEecC
Q psy14589 260 LFDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAP-GGDLSSVIESLRSSC--SYINIISR 336 (655)
Q Consensus 260 ~ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg-~~~v~~~l~~L~~~~--~~v~iLGs 336 (655)
.++++.+.+.+ ++|.|+++++.+++.++|+..|...-.........|-|+... ...+.+++++|++.- ..++++|.
T Consensus 68 r~vtL~i~l~D-r~GlLs~Il~~IA~~~aNIltI~q~i~~~g~a~vs~tVevs~~~~~L~~Li~~L~~i~gV~~V~i~~~ 146 (147)
T PRK04435 68 KIITLSLLLED-RSGTLSKVLNVIAEAGGNILTINQSIPLQGRANVTISIDTSSMEGDIDELLEKLRNLDGVEKVELIGM 146 (147)
T ss_pred cEEEEEEEEec-CCCHHHHHHHHHHHcCCCeEEEEEEcCCCCEEEEEEEEEeCChHHHHHHHHHHHHcCCCcEEEEEEec
Confidence 46788888888 899999999999999999999975322222345666666655 458999999999874 45777764
No 470
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.12 E-value=0.28 Score=50.05 Aligned_cols=35 Identities=23% Similarity=0.288 Sum_probs=29.7
Q ss_pred CCCEEEEEcCC--CchHHHHHHHHHHcCCeEEEEecC
Q psy14589 110 EPDTLFIIGAN--RGNGLAAIQVGKAYGLTVFASVGC 144 (655)
Q Consensus 110 ~Gd~VLI~Gas--GgVG~~avQlAk~~Ga~Viat~~s 144 (655)
.|.+|+|+||+ ||+|...+......|++|++++++
T Consensus 4 ~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~ 40 (256)
T PRK12748 4 MKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWS 40 (256)
T ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCC
Confidence 57889999998 489998887776789999998876
No 471
>KOG1502|consensus
Probab=94.07 E-value=0.19 Score=54.03 Aligned_cols=74 Identities=20% Similarity=0.112 Sum_probs=51.7
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHH---HHHhCC-CcE---EE--eCCccchhHHHHHHHhcCCC
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVA---KAYGLG-ADY---VV--DHTIRELDRFANQILSYGSE 180 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~---~a~~LG-Ad~---vI--d~~~~~~~d~~~~i~~~~~g 180 (655)
.+.+|+|+||+|=||+..+...-.+|.+|.+++|++++.+ .++++. +.. ++ |-.+. +.+.+.+. |
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~--~sf~~ai~----g 78 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDE--GSFDKAID----G 78 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEecccccc--chHHHHHh----C
Confidence 6789999999999999999999999999999999987633 366653 321 11 11111 23444443 7
Q ss_pred eeEEEeCCC
Q psy14589 181 LDADHPGFT 189 (655)
Q Consensus 181 vDvV~D~vG 189 (655)
+|.||-++.
T Consensus 79 cdgVfH~As 87 (327)
T KOG1502|consen 79 CDGVFHTAS 87 (327)
T ss_pred CCEEEEeCc
Confidence 888886553
No 472
>PRK00811 spermidine synthase; Provisional
Probab=94.06 E-value=0.31 Score=51.64 Aligned_cols=99 Identities=20% Similarity=0.100 Sum_probs=62.6
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHhC------CC--cEEEeCCccchhHHHHHHHhcCC
Q psy14589 109 PEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYGL------GA--DYVVDHTIRELDRFANQILSYGS 179 (655)
Q Consensus 109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~L------GA--d~vId~~~~~~~d~~~~i~~~~~ 179 (655)
+++++||+.|+ |.|..+..+++..+. +|.+++.+++-.+.+++. |+ +.=+..... |..+.+.+..+
T Consensus 75 ~~p~~VL~iG~--G~G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~~---Da~~~l~~~~~ 149 (283)
T PRK00811 75 PNPKRVLIIGG--GDGGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVIG---DGIKFVAETEN 149 (283)
T ss_pred CCCCEEEEEec--CchHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEEC---chHHHHhhCCC
Confidence 46789999997 557778888887665 899999999888777652 11 100111111 34444544344
Q ss_pred CeeEEEeCCCcc--------hHHHHHHHHHHhccccceEEE
Q psy14589 180 ELDADHPGFTDP--------VYRARRKYFADLAFNYKHFFF 212 (655)
Q Consensus 180 gvDvV~D~vG~~--------~~~~l~~~l~~l~~gGrlv~v 212 (655)
.+|+|+-....+ +.+-++.+.+.|++||.++.-
T Consensus 150 ~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~gGvlv~~ 190 (283)
T PRK00811 150 SFDVIIVDSTDPVGPAEGLFTKEFYENCKRALKEDGIFVAQ 190 (283)
T ss_pred cccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 799987533111 112256788899999988764
No 473
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=94.06 E-value=0.2 Score=52.75 Aligned_cols=74 Identities=14% Similarity=0.080 Sum_probs=50.3
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcC-CeEEEEecChHHHHHHH-hCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeC
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYG-LTVFASVGCPVGVAKAY-GLGADYVVDHTIRELDRFANQILSYGSELDADHPG 187 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~G-a~Viat~~s~~k~~~a~-~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~ 187 (655)
.+.+|+|.|+ ||+|.+++..++..| .+|+++.++.++.+.+. .++....+.... +..+. -.++|+|++|
T Consensus 122 ~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~~~----~~~~~----~~~~DivIna 192 (278)
T PRK00258 122 KGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAELDL----ELQEE----LADFDLIINA 192 (278)
T ss_pred CCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceeecc----cchhc----cccCCEEEEC
Confidence 6789999998 999999999999999 58999999988876653 343211011100 11111 1258999999
Q ss_pred CCcch
Q psy14589 188 FTDPV 192 (655)
Q Consensus 188 vG~~~ 192 (655)
++...
T Consensus 193 Tp~g~ 197 (278)
T PRK00258 193 TSAGM 197 (278)
T ss_pred CcCCC
Confidence 87553
No 474
>TIGR00138 gidB 16S rRNA methyltransferase GidB. GidB (glucose-inhibited division protein B) appears to be present and in a single copy in nearly all complete eubacterial genomes. It is missing only from some obligate intracellular species of various lineages (Chlamydiae, Ehrlichia, Wolbachia, Anaplasma, Buchnera, etc.). GidB shows a methytransferase fold in its the crystal structure, and acts as a 7-methylguanosine (m(7)G) methyltransferase, apparently specific to 16S rRNA.
Probab=94.06 E-value=0.24 Score=48.92 Aligned_cols=95 Identities=16% Similarity=0.103 Sum_probs=58.4
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecChHHHHHH----HhCCCcEEEeCCccchhHHHHHHHhcCCCeeEE
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAY-GLTVFASVGCPVGVAKA----YGLGADYVVDHTIRELDRFANQILSYGSELDAD 184 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~-Ga~Viat~~s~~k~~~a----~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV 184 (655)
+|++|+=.|+ |.|..++.+|+.. +++|++++.+++..+.+ ++.|.+.+ ..... +..+ + ...+.+|+|
T Consensus 42 ~~~~vLDiGc--GtG~~s~~la~~~~~~~V~~iD~s~~~~~~a~~~~~~~~~~~i-~~i~~---d~~~-~-~~~~~fD~I 113 (181)
T TIGR00138 42 DGKKVIDIGS--GAGFPGIPLAIARPELKLTLLESNHKKVAFLREVKAELGLNNV-EIVNG---RAED-F-QHEEQFDVI 113 (181)
T ss_pred CCCeEEEecC--CCCccHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHhCCCCe-EEEec---chhh-c-cccCCccEE
Confidence 4889998887 4455666667665 46899999998765554 34565432 22111 2222 1 112368988
Q ss_pred EeCCCcchHHHHHHHHHHhccccceEEE
Q psy14589 185 HPGFTDPVYRARRKYFADLAFNYKHFFF 212 (655)
Q Consensus 185 ~D~vG~~~~~~l~~~l~~l~~gGrlv~v 212 (655)
+-..-....+.++.+.+.|++||+++..
T Consensus 114 ~s~~~~~~~~~~~~~~~~LkpgG~lvi~ 141 (181)
T TIGR00138 114 TSRALASLNVLLELTLNLLKVGGYFLAY 141 (181)
T ss_pred EehhhhCHHHHHHHHHHhcCCCCEEEEE
Confidence 7543222223367778899999998864
No 475
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=93.98 E-value=0.099 Score=61.52 Aligned_cols=77 Identities=22% Similarity=0.225 Sum_probs=56.4
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChH---------------------HHHHHHhCCCcEEEeCCccchh
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPV---------------------GVAKAYGLGADYVVDHTIRELD 168 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~---------------------k~~~a~~LGAd~vId~~~~~~~ 168 (655)
.|++|+|.|+ |+.|+.+++.++.+|.+|++.++.+. ..+.++++|++..++..-...-
T Consensus 309 ~~kkVaIIG~-GpaGl~aA~~L~~~G~~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~ 387 (639)
T PRK12809 309 RSEKVAVIGA-GPAGLGCADILARAGVQVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDI 387 (639)
T ss_pred CCCEEEEECc-CHHHHHHHHHHHHcCCcEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcC
Confidence 5899999999 99999999999999999988876642 4566788998877665321100
Q ss_pred HHHHHHHhcCCCeeEEEeCCCcc
Q psy14589 169 RFANQILSYGSELDADHPGFTDP 191 (655)
Q Consensus 169 d~~~~i~~~~~gvDvV~D~vG~~ 191 (655)
++. +...++|.|+.++|..
T Consensus 388 ~~~----~l~~~~DaV~latGa~ 406 (639)
T PRK12809 388 TFS----DLTSEYDAVFIGVGTY 406 (639)
T ss_pred CHH----HHHhcCCEEEEeCCCC
Confidence 121 1223689999999976
No 476
>PLN02427 UDP-apiose/xylose synthase
Probab=93.97 E-value=0.27 Score=53.83 Aligned_cols=74 Identities=15% Similarity=-0.036 Sum_probs=49.5
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHc-CCeEEEEecChHHHHHHHhCCC------cEEE--eCCccchhHHHHHHHhcCCC
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAY-GLTVFASVGCPVGVAKAYGLGA------DYVV--DHTIRELDRFANQILSYGSE 180 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~-Ga~Viat~~s~~k~~~a~~LGA------d~vI--d~~~~~~~d~~~~i~~~~~g 180 (655)
+..+|||+||+|-||..+++.+... |.+|++++++.++.+.+...+. -.++ |..+. +++.+.+ .+
T Consensus 13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~--~~l~~~~----~~ 86 (386)
T PLN02427 13 KPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHD--SRLEGLI----KM 86 (386)
T ss_pred cCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCCh--HHHHHHh----hc
Confidence 5678999999999999999877777 5899999887766655544331 1222 22221 1222222 25
Q ss_pred eeEEEeCCC
Q psy14589 181 LDADHPGFT 189 (655)
Q Consensus 181 vDvV~D~vG 189 (655)
+|+|+.+++
T Consensus 87 ~d~ViHlAa 95 (386)
T PLN02427 87 ADLTINLAA 95 (386)
T ss_pred CCEEEEccc
Confidence 899999886
No 477
>PLN02244 tocopherol O-methyltransferase
Probab=93.96 E-value=0.15 Score=55.42 Aligned_cols=99 Identities=16% Similarity=0.107 Sum_probs=63.1
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh----CCCcEEEeCCccchhHHHHHHHhcCCCeeEE
Q psy14589 109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG----LGADYVVDHTIRELDRFANQILSYGSELDAD 184 (655)
Q Consensus 109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~----LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV 184 (655)
+++++||=.|+ |.|..+..+++..|++|++++.++...+.+++ .|...-+..... |..+ +.-..+.+|+|
T Consensus 117 ~~~~~VLDiGC--G~G~~~~~La~~~g~~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~---D~~~-~~~~~~~FD~V 190 (340)
T PLN02244 117 KRPKRIVDVGC--GIGGSSRYLARKYGANVKGITLSPVQAARANALAAAQGLSDKVSFQVA---DALN-QPFEDGQFDLV 190 (340)
T ss_pred CCCCeEEEecC--CCCHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEc---Cccc-CCCCCCCccEE
Confidence 47889998887 66778888999889999999999887666543 343211111111 1111 00012368998
Q ss_pred EeCCCcc----hHHHHHHHHHHhccccceEEEe
Q psy14589 185 HPGFTDP----VYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 185 ~D~vG~~----~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
+-.-... ..+.+..+.++|++||+++++.
T Consensus 191 ~s~~~~~h~~d~~~~l~e~~rvLkpGG~lvi~~ 223 (340)
T PLN02244 191 WSMESGEHMPDKRKFVQELARVAAPGGRIIIVT 223 (340)
T ss_pred EECCchhccCCHHHHHHHHHHHcCCCcEEEEEE
Confidence 7533221 1134788899999999999864
No 478
>TIGR01127 ilvA_1Cterm threonine dehydratase, medium form. A form of threonine dehydratase with two copies of the C-terminal domain Pfam:PF00585 is described by TIGR01124. This model describes a phylogenetically distinct form with a single copy of pfam00585. This form branches with the catabolic threonine dehydratase of E. coli; many members are designated as catabolic for this reason. However, the catabolic form lacks any pfam00585 domain. Many members of this model are found in species with other Ile biosynthetic enzymes.
Probab=93.96 E-value=1.7 Score=47.71 Aligned_cols=68 Identities=15% Similarity=0.079 Sum_probs=49.6
Q ss_pred eEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecc-cCCC-CCcceEEEEEecC--CchHHHHHHHHHccCC
Q psy14589 261 FDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESR-SSTR-IENNYEFMVECAP--GGDLSSVIESLRSSCS 329 (655)
Q Consensus 261 ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSR-P~~~-~~~~Y~FfVd~eg--~~~v~~~l~~L~~~~~ 329 (655)
...+.+.+++ +||.|+++++.+++.+.|++.|.-+ ..+. ........|.+|. .+..+++++.|++..-
T Consensus 305 ~~~l~v~l~D-~pG~L~~v~~~i~~~~~NI~~i~~~r~~~~~~~~~~~v~v~vet~~~~~~~~i~~~L~~~G~ 376 (380)
T TIGR01127 305 KVRIETVLPD-RPGALYHLLESIAEARANIVKIDHDRLSKEIPPGFAMVEITLETRGKEHLDEILKILRDMGY 376 (380)
T ss_pred EEEEEEEeCC-CCCHHHHHHHHHhcCCCcEEEEEeeccccCCCCceEEEEEEEEeCCHHHHHHHHHHHHHcCC
Confidence 4578888888 9999999999999999999988654 2222 1234455566655 4666788888887643
No 479
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=93.91 E-value=0.87 Score=40.76 Aligned_cols=93 Identities=17% Similarity=0.042 Sum_probs=61.3
Q ss_pred EEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcC-CCeeEEEeCCCcch
Q psy14589 114 LFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYG-SELDADHPGFTDPV 192 (655)
Q Consensus 114 VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~-~gvDvV~D~vG~~~ 192 (655)
|+|.|. |.+|..+++..+..+.+|++++.++++.+.+++.|.. ++.-... + .+.+++.+ ..++.++-+++.+.
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~~~~-~i~gd~~---~-~~~l~~a~i~~a~~vv~~~~~d~ 74 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELREEGVE-VIYGDAT---D-PEVLERAGIEKADAVVILTDDDE 74 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTTSE-EEES-TT---S-HHHHHHTTGGCESEEEEESSSHH
T ss_pred eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhcccc-cccccch---h-hhHHhhcCccccCEEEEccCCHH
Confidence 678899 9999999999888677999999999999999999955 4532221 1 22333332 27888888887763
Q ss_pred -HHHHHHHHHHhccccceEEE
Q psy14589 193 -YRARRKYFADLAFNYKHFFF 212 (655)
Q Consensus 193 -~~~l~~~l~~l~~gGrlv~v 212 (655)
+-.....++.+.+..+++..
T Consensus 75 ~n~~~~~~~r~~~~~~~ii~~ 95 (116)
T PF02254_consen 75 ENLLIALLARELNPDIRIIAR 95 (116)
T ss_dssp HHHHHHHHHHHHTTTSEEEEE
T ss_pred HHHHHHHHHHHHCCCCeEEEE
Confidence 11122344445556666664
No 480
>cd02116 ACT ACT domains are commonly involved in specifically binding an amino acid or other small ligand leading to regulation of the enzyme. Members of this CD belong to the superfamily of ACT regulatory domains. Pairs of ACT domains are commonly involved in specifically binding an amino acid or other small ligand leading to regulation of the enzyme. The ACT domain has been detected in a number of diverse proteins; some of these proteins are involved in amino acid and purine biosynthesis, phenylalanine hydroxylation, regulation of bacterial metabolism and transcription, and many remain to be characterized. ACT domain-containing enzymes involved in amino acid and purine synthesis are in many cases allosteric enzymes with complex regulation enforced by the binding of ligands. The ACT domain is commonly involved in the binding of a small regulatory molecule, such as the amino acids L-Ser and L-Phe in the case of D-3-phosphoglycerate dehydrogenase and the bifunctional chorismate mutase-p
Probab=93.89 E-value=0.23 Score=36.47 Aligned_cols=57 Identities=28% Similarity=0.465 Sum_probs=42.7
Q ss_pred EEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecCCchHHHHHHHH
Q psy14589 266 FSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAPGGDLSSVIESL 324 (655)
Q Consensus 266 f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg~~~v~~~l~~L 324 (655)
+..++ .+|.+.++++.+++.++++..+.+.+... .+...+++.++.......++++|
T Consensus 3 i~~~~-~~~~l~~i~~~l~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l 59 (60)
T cd02116 3 VSGPD-RPGLLAKVLSVLAEAGINITSIEQRTSGD-GGEADIFIVVDGDGDLEKLLEAL 59 (60)
T ss_pred EEecC-CCchHHHHHHHHHHCCCcEEEEEeEEcCC-CCeEEEEEEEechHHHHHHHHHh
Confidence 44556 78999999999999999999998876543 55667777776522566666655
No 481
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=93.82 E-value=0.43 Score=50.59 Aligned_cols=70 Identities=17% Similarity=0.130 Sum_probs=48.9
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHH-hCC----CcEEEeCCccchhHHHHHHHhcCCCeeE
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAY-GLG----ADYVVDHTIRELDRFANQILSYGSELDA 183 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~-~LG----Ad~vId~~~~~~~d~~~~i~~~~~gvDv 183 (655)
.+.+|+|.|+ ||+|.+++..+...|+ +|+.++++.+|.+.+. .++ ...+.... ++.+.+ ..+|+
T Consensus 126 ~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~-----~~~~~~----~~aDi 195 (284)
T PRK12549 126 SLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAGS-----DLAAAL----AAADG 195 (284)
T ss_pred cCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEecc-----chHhhh----CCCCE
Confidence 6789999999 9999999999989998 7999999988776653 232 12222211 222222 25899
Q ss_pred EEeCCC
Q psy14589 184 DHPGFT 189 (655)
Q Consensus 184 V~D~vG 189 (655)
|++|+.
T Consensus 196 VInaTp 201 (284)
T PRK12549 196 LVHATP 201 (284)
T ss_pred EEECCc
Confidence 999964
No 482
>TIGR00477 tehB tellurite resistance protein TehB. Part of a tellurite-reducing operon tehA and tehB
Probab=93.81 E-value=0.12 Score=51.40 Aligned_cols=93 Identities=13% Similarity=0.080 Sum_probs=57.8
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh----CCCcEEEeCCccchhHHHHHHHhcCCCeeEEE
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG----LGADYVVDHTIRELDRFANQILSYGSELDADH 185 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~----LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~ 185 (655)
++.+||-.|+ |.|..++.+|+ .|.+|++++.+++-++.+++ .|.. +..... +.... ...+.+|+|+
T Consensus 30 ~~~~vLDiGc--G~G~~a~~la~-~g~~V~~iD~s~~~l~~a~~~~~~~~~~--v~~~~~---d~~~~--~~~~~fD~I~ 99 (195)
T TIGR00477 30 APCKTLDLGC--GQGRNSLYLSL-AGYDVRAWDHNPASIASVLDMKARENLP--LRTDAY---DINAA--ALNEDYDFIF 99 (195)
T ss_pred CCCcEEEeCC--CCCHHHHHHHH-CCCeEEEEECCHHHHHHHHHHHHHhCCC--ceeEec---cchhc--cccCCCCEEE
Confidence 4668999897 77888888887 58899999999876665532 3332 111111 11110 1123689887
Q ss_pred eCC-----Ccc-hHHHHHHHHHHhccccceEEE
Q psy14589 186 PGF-----TDP-VYRARRKYFADLAFNYKHFFF 212 (655)
Q Consensus 186 D~v-----G~~-~~~~l~~~l~~l~~gGrlv~v 212 (655)
... ..+ ....++.+.+.|++||+++++
T Consensus 100 ~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lli~ 132 (195)
T TIGR00477 100 STVVFMFLQAGRVPEIIANMQAHTRPGGYNLIV 132 (195)
T ss_pred EecccccCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 542 111 113467888899999996655
No 483
>PF13291 ACT_4: ACT domain; PDB: 2KO1_B 3IBW_A.
Probab=93.79 E-value=0.26 Score=41.60 Aligned_cols=67 Identities=16% Similarity=0.208 Sum_probs=49.4
Q ss_pred eEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecC--CchHHHHHHHHHccCC
Q psy14589 261 FDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAP--GGDLSSVIESLRSSCS 329 (655)
Q Consensus 261 ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg--~~~v~~~l~~L~~~~~ 329 (655)
.+.+.+...+ ++|-|+++.+.+++.++|+..++....+. .+.....++++. .+.+..+++.|++...
T Consensus 6 ~~~l~i~~~d-r~GlL~dI~~~i~~~~~nI~~i~~~~~~~-~~~~~~~l~v~V~d~~~L~~ii~~L~~i~~ 74 (80)
T PF13291_consen 6 PVRLRIEAED-RPGLLADITSVISENGVNIRSINARTNKD-DGTARITLTVEVKDLEHLNQIIRKLRQIPG 74 (80)
T ss_dssp EEEEEEEEE---TTHHHHHHHHHHCSSSEEEEEEEEE--E-TTEEEEEEEEEESSHHHHHHHHHHHCTSTT
T ss_pred EEEEEEEEEc-CCCHHHHHHHHHHHCCCCeEEEEeEEecc-CCEEEEEEEEEECCHHHHHHHHHHHHCCCC
Confidence 4667777777 89999999999999999999999988652 334445555544 6789999999987654
No 484
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=93.76 E-value=0.046 Score=56.53 Aligned_cols=67 Identities=18% Similarity=-0.047 Sum_probs=45.2
Q ss_pred EEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCCCc
Q psy14589 114 LFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGFTD 190 (655)
Q Consensus 114 VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG~ 190 (655)
|||+||+|-||..+++.....|.+|+++++++.+.+.....+ +.+.... .+.+. -.++|+|+.++|.
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~---~~~~~----~~~~D~Vvh~a~~ 67 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKWEG---YKPWAPL---AESEA----LEGADAVINLAGE 67 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccccee---eeccccc---chhhh----cCCCCEEEECCCC
Confidence 689999999999999888888999999999876643322222 2111111 11111 1268999999975
No 485
>PLN02583 cinnamoyl-CoA reductase
Probab=93.75 E-value=0.33 Score=51.25 Aligned_cols=37 Identities=19% Similarity=0.170 Sum_probs=32.8
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecCh
Q psy14589 109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCP 145 (655)
Q Consensus 109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~ 145 (655)
.++.+|+|+||+|.||..+++.+...|.+|++++++.
T Consensus 4 ~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~ 40 (297)
T PLN02583 4 ESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKN 40 (297)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCc
Confidence 4678999999999999999998888999999998753
No 486
>PRK11895 ilvH acetolactate synthase 3 regulatory subunit; Reviewed
Probab=93.70 E-value=0.33 Score=47.28 Aligned_cols=70 Identities=10% Similarity=0.181 Sum_probs=56.7
Q ss_pred EEEEEccCCCcchHHHHHHHHHhCCcceeeeecccCCCCCcceEEEEEecC-CchHHHHHHHHHccCCcEEEe
Q psy14589 263 FVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSSTRIENNYEFMVECAP-GGDLSSVIESLRSSCSYINII 334 (655)
Q Consensus 263 sl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~~~~~~~Y~FfVd~eg-~~~v~~~l~~L~~~~~~v~iL 334 (655)
++.+.+.| +||.|+++..+|+.+|+|+..+-.-|... .+.+.+.+-+++ +..+.++.+.|++.-+-+++.
T Consensus 4 ~IsV~veN-~pGvL~rI~~lf~rrg~NI~Sl~v~~te~-~~~sriti~V~~~~~~i~qi~kQl~KLidV~~V~ 74 (161)
T PRK11895 4 TLSVLVEN-EPGVLSRVAGLFSRRGYNIESLTVGPTED-PGLSRMTIVTSGDEQVIEQITKQLNKLIDVLKVV 74 (161)
T ss_pred EEEEEEcC-CCcHHHHHHHHHHhCCCcEEEEEeeecCC-CCEEEEEEEEECCHHHHHHHHHHHhccccEEEEE
Confidence 45556677 99999999999999999999998888742 456667777888 778999999999987766554
No 487
>PLN02214 cinnamoyl-CoA reductase
Probab=93.70 E-value=0.23 Score=53.54 Aligned_cols=75 Identities=16% Similarity=0.037 Sum_probs=49.4
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHH--HHHhC---CC-cEEE--eCCccchhHHHHHHHhcCCCe
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVA--KAYGL---GA-DYVV--DHTIRELDRFANQILSYGSEL 181 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~--~a~~L---GA-d~vI--d~~~~~~~d~~~~i~~~~~gv 181 (655)
.+.+|+|+||+|.||..+++.+...|.+|++++++.++.. .+..+ +. -.++ |..+. +++.+.+. ++
T Consensus 9 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~--~~~~~~~~----~~ 82 (342)
T PLN02214 9 AGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDY--EALKAAID----GC 82 (342)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCCh--HHHHHHHh----cC
Confidence 6789999999999999999988888999999988765422 12222 11 1122 33222 12333332 68
Q ss_pred eEEEeCCCc
Q psy14589 182 DADHPGFTD 190 (655)
Q Consensus 182 DvV~D~vG~ 190 (655)
|+|+.+++.
T Consensus 83 d~Vih~A~~ 91 (342)
T PLN02214 83 DGVFHTASP 91 (342)
T ss_pred CEEEEecCC
Confidence 999998864
No 488
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=93.67 E-value=0.36 Score=50.59 Aligned_cols=71 Identities=13% Similarity=-0.020 Sum_probs=48.8
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH-HhC---CCcEEEeCCccchhHHHHHHHhcCCCeeEE
Q psy14589 109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA-YGL---GADYVVDHTIRELDRFANQILSYGSELDAD 184 (655)
Q Consensus 109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a-~~L---GAd~vId~~~~~~~d~~~~i~~~~~gvDvV 184 (655)
..+.+|+|.|+ ||+|.+++...+..|++|+++.+++++.+.+ ..+ |...++.. .+. ....+|+|
T Consensus 115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~~--------~~~---~~~~~Div 182 (270)
T TIGR00507 115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAFSM--------DEL---PLHRVDLI 182 (270)
T ss_pred ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEech--------hhh---cccCccEE
Confidence 46889999999 8999998887777899999999988776544 333 32222211 111 11258999
Q ss_pred EeCCCcc
Q psy14589 185 HPGFTDP 191 (655)
Q Consensus 185 ~D~vG~~ 191 (655)
++|++..
T Consensus 183 Inatp~g 189 (270)
T TIGR00507 183 INATSAG 189 (270)
T ss_pred EECCCCC
Confidence 9999764
No 489
>PRK07334 threonine dehydratase; Provisional
Probab=93.64 E-value=1.6 Score=48.55 Aligned_cols=72 Identities=18% Similarity=0.272 Sum_probs=53.3
Q ss_pred eEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecccC----CCCCcceEEEEEecCCchHHHHHHHHHccCCcEEE
Q psy14589 261 FDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESRSS----TRIENNYEFMVECAPGGDLSSVIESLRSSCSYINI 333 (655)
Q Consensus 261 ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSRP~----~~~~~~Y~FfVd~eg~~~v~~~l~~L~~~~~~v~i 333 (655)
.+.+.+...+ ++|.|.++++.+++.++|+..+.++.. +.......|-|++...+.+.++++.|++..-.+.+
T Consensus 326 ~v~l~I~~~d-r~GlL~dI~~~is~~~~nI~~v~~~~~~~~~~~~~~~i~l~i~V~d~~~L~~vi~~Lr~~g~~~~~ 401 (403)
T PRK07334 326 LARLRVDIRD-RPGALARVTALIGEAGANIIEVSHQRLFTDLPAKGAELELVIETRDAAHLQEVIAALRAAGFEARL 401 (403)
T ss_pred EEEEEEEeCC-CCCHHHHHHHHHhhCCCceEEEEEEecccCCCCCeEEEEEEEEeCCHHHHHHHHHHHHHcCCeeEe
Confidence 5778888888 899999999999999999999998754 22222333444443367889999999987554443
No 490
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=93.61 E-value=0.29 Score=52.54 Aligned_cols=35 Identities=14% Similarity=0.113 Sum_probs=31.2
Q ss_pred CEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChH
Q psy14589 112 DTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPV 146 (655)
Q Consensus 112 d~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~ 146 (655)
++|||+||+|.||..+++.....|.+|++++++++
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~ 35 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSS 35 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCc
Confidence 47999999999999999988888999999988653
No 491
>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases. The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....
Probab=93.55 E-value=0.4 Score=48.48 Aligned_cols=101 Identities=14% Similarity=0.022 Sum_probs=65.6
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHc--CCeEEEEecChHHHHHHH----hCCCcEEEeCCccchhHHHHHHHhcC--CCe
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAY--GLTVFASVGCPVGVAKAY----GLGADYVVDHTIRELDRFANQILSYG--SEL 181 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~--Ga~Viat~~s~~k~~~a~----~LGAd~vId~~~~~~~d~~~~i~~~~--~gv 181 (655)
...+||-.|. ++|..++.+|+++ +++|++++.++++.+.++ ..|.+.-|+....+..+....+.... +.+
T Consensus 45 ~~k~vLEIGt--~~GySal~la~~l~~~g~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~gda~~~l~~l~~~~~~~~f 122 (205)
T PF01596_consen 45 RPKRVLEIGT--FTGYSALWLAEALPEDGKITTIEIDPERAEIARENFRKAGLDDRIEVIEGDALEVLPELANDGEEGQF 122 (205)
T ss_dssp T-SEEEEEST--TTSHHHHHHHHTSTTTSEEEEEESSHHHHHHHHHHHHHTTGGGGEEEEES-HHHHHHHHHHTTTTTSE
T ss_pred CCceEEEecc--ccccHHHHHHHhhcccceEEEecCcHHHHHHHHHHHHhcCCCCcEEEEEeccHhhHHHHHhccCCCce
Confidence 4568999996 6777888899886 579999999998887774 45654323322221113333333322 379
Q ss_pred eEEEeCCCcc-hHHHHHHHHHHhccccceEEE
Q psy14589 182 DADHPGFTDP-VYRARRKYFADLAFNYKHFFF 212 (655)
Q Consensus 182 DvV~D~vG~~-~~~~l~~~l~~l~~gGrlv~v 212 (655)
|.||--.... ..+-++.++++|++||.+|.=
T Consensus 123 D~VFiDa~K~~y~~y~~~~~~ll~~ggvii~D 154 (205)
T PF01596_consen 123 DFVFIDADKRNYLEYFEKALPLLRPGGVIIAD 154 (205)
T ss_dssp EEEEEESTGGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEEcccccchhhHHHHHhhhccCCeEEEEc
Confidence 9986433343 324478899999999987764
No 492
>KOG1203|consensus
Probab=93.54 E-value=0.27 Score=54.57 Aligned_cols=82 Identities=16% Similarity=0.155 Sum_probs=53.2
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHH-H----hCCCcEEEeCCccchhHHHHHHHh-cCCCee
Q psy14589 109 PEPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKA-Y----GLGADYVVDHTIRELDRFANQILS-YGSELD 182 (655)
Q Consensus 109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a-~----~LGAd~vId~~~~~~~d~~~~i~~-~~~gvD 182 (655)
...++|+|.||+|.+|+..++.++.+|..|.+++++.++.+.. + ..|+..|....... .+....+.+ ...+..
T Consensus 77 ~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~-~d~~~~~~~~~~~~~~ 155 (411)
T KOG1203|consen 77 KKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTA-IDILKKLVEAVPKGVV 155 (411)
T ss_pred CCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcccccccccceeeeccccc-cchhhhhhhhccccce
Confidence 4667899999999999999999999999999999987665443 3 34444443222211 122223222 222456
Q ss_pred EEEeCCCcc
Q psy14589 183 ADHPGFTDP 191 (655)
Q Consensus 183 vV~D~vG~~ 191 (655)
+++.|.|+.
T Consensus 156 ~v~~~~ggr 164 (411)
T KOG1203|consen 156 IVIKGAGGR 164 (411)
T ss_pred eEEecccCC
Confidence 677666654
No 493
>PRK06382 threonine dehydratase; Provisional
Probab=93.48 E-value=2.9 Score=46.55 Aligned_cols=67 Identities=13% Similarity=0.146 Sum_probs=48.5
Q ss_pred eEEEEEEccCCCcchHHHHHHHHHhCCcceeeeecc----cCCCCCcceEEEEEecC-C-chHHHHHHHHHccCCc
Q psy14589 261 FDFVIFSNHQDEVGALAKTLKLFKKHNVNLLHIESR----SSTRIENNYEFMVECAP-G-GDLSSVIESLRSSCSY 330 (655)
Q Consensus 261 ktsl~f~l~~d~~gaL~~iL~~f~~~~Inlt~IeSR----P~~~~~~~Y~FfVd~eg-~-~~v~~~l~~L~~~~~~ 330 (655)
++.+.+.+++ +||+|.++++++.+.++|+++++.. +.. ..+....+.++. + +...++++.|++..-.
T Consensus 330 ~~rl~v~v~D-~pG~L~~l~~ii~~~~~nI~~v~~~~~~~~~~--~~~~~v~i~vet~~~~~~~~v~~~L~~~Gy~ 402 (406)
T PRK06382 330 LVRIECNIPD-RPGNLYRIANAIASNGGNIYHAEVDNLRKETP--PGFQSVTFTVNVRGQDHLDRILNALREMGYK 402 (406)
T ss_pred EEEEEEEcCC-CCCHHHHHHHHHhcCCCcEEEEEEeeccccCC--CCcEEEEEEEEeCCHHHHHHHHHHHHHCCCC
Confidence 5667778888 9999999999999999999998864 433 334445555555 2 4445888888776433
No 494
>PRK07578 short chain dehydrogenase; Provisional
Probab=93.48 E-value=0.26 Score=48.32 Aligned_cols=64 Identities=19% Similarity=0.106 Sum_probs=43.7
Q ss_pred EEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCCCc
Q psy14589 113 TLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGFTD 190 (655)
Q Consensus 113 ~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG~ 190 (655)
+++|+|++||+|..++...... ++|+++++++. ....|.++. +++.+.+.+. +++|+++.++|.
T Consensus 2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~----------~~~~D~~~~--~~~~~~~~~~-~~id~lv~~ag~ 65 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG----------DVQVDITDP--ASIRALFEKV-GKVDAVVSAAGK 65 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC----------ceEecCCCh--HHHHHHHHhc-CCCCEEEECCCC
Confidence 6899999999999877655555 89999887643 123455543 2344434333 378999998875
No 495
>PLN00203 glutamyl-tRNA reductase
Probab=93.48 E-value=0.62 Score=53.53 Aligned_cols=74 Identities=14% Similarity=0.029 Sum_probs=52.6
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHH-hCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeC
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAY-GLGADYVVDHTIRELDRFANQILSYGSELDADHPG 187 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~-~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~ 187 (655)
.+.+|+|.|+ |.+|.++++.+...|+ +|+++.++.++.+.+. .++...+ ..... ++..+.+. +.|+|+.|
T Consensus 265 ~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i-~~~~~--~dl~~al~----~aDVVIsA 336 (519)
T PLN00203 265 ASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEI-IYKPL--DEMLACAA----EADVVFTS 336 (519)
T ss_pred CCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCce-EeecH--hhHHHHHh----cCCEEEEc
Confidence 5789999999 9999999999888997 7999999988876654 4532211 11110 12333332 68999999
Q ss_pred CCcc
Q psy14589 188 FTDP 191 (655)
Q Consensus 188 vG~~ 191 (655)
++..
T Consensus 337 T~s~ 340 (519)
T PLN00203 337 TSSE 340 (519)
T ss_pred cCCC
Confidence 9876
No 496
>PRK08655 prephenate dehydrogenase; Provisional
Probab=93.47 E-value=0.39 Score=54.02 Aligned_cols=89 Identities=17% Similarity=0.057 Sum_probs=56.7
Q ss_pred EEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHH-HHHHhCCCcEEEeCCccchhHHHHHHHhcCCCeeEEEeCCCcc
Q psy14589 113 TLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGV-AKAYGLGADYVVDHTIRELDRFANQILSYGSELDADHPGFTDP 191 (655)
Q Consensus 113 ~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~-~~a~~LGAd~vId~~~~~~~d~~~~i~~~~~gvDvV~D~vG~~ 191 (655)
+|.|.||+|.+|...++.++..|.+|++.++++++. +.+.++|+.. .. +..+.+. ..|+|+-|+...
T Consensus 2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~~----~~----~~~e~~~----~aDvVIlavp~~ 69 (437)
T PRK08655 2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVEY----AN----DNIDAAK----DADIVIISVPIN 69 (437)
T ss_pred EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCee----cc----CHHHHhc----cCCEEEEecCHH
Confidence 689999779999999999998999999999887774 5566777631 11 1222222 468888888765
Q ss_pred h-HHHHHHHHHHhccccceEEEe
Q psy14589 192 V-YRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 192 ~-~~~l~~~l~~l~~gGrlv~v~ 213 (655)
. .+.+.+....++++..++-++
T Consensus 70 ~~~~vl~~l~~~l~~~~iViDvs 92 (437)
T PRK08655 70 VTEDVIKEVAPHVKEGSLLMDVT 92 (437)
T ss_pred HHHHHHHHHHhhCCCCCEEEEcc
Confidence 3 111233333444444444443
No 497
>PLN00198 anthocyanidin reductase; Provisional
Probab=93.47 E-value=0.29 Score=52.32 Aligned_cols=38 Identities=21% Similarity=0.129 Sum_probs=32.7
Q ss_pred CCCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHH
Q psy14589 110 EPDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVG 147 (655)
Q Consensus 110 ~Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k 147 (655)
.+.+|+|+||+|.||..+++.....|.+|++++++.++
T Consensus 8 ~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~ 45 (338)
T PLN00198 8 GKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPEN 45 (338)
T ss_pred CCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCC
Confidence 57899999999999999998888889999888776543
No 498
>PLN02366 spermidine synthase
Probab=93.43 E-value=0.38 Score=51.63 Aligned_cols=102 Identities=10% Similarity=-0.000 Sum_probs=61.6
Q ss_pred CCCCEEEEEcCCCchHHHHHHHHHHcCC-eEEEEecChHHHHHHHh-CCCc-EEEeCCc-c-chhHHHHHHHhc-CCCee
Q psy14589 109 PEPDTLFIIGANRGNGLAAIQVGKAYGL-TVFASVGCPVGVAKAYG-LGAD-YVVDHTI-R-ELDRFANQILSY-GSELD 182 (655)
Q Consensus 109 ~~Gd~VLI~GasGgVG~~avQlAk~~Ga-~Viat~~s~~k~~~a~~-LGAd-~vId~~~-~-~~~d~~~~i~~~-~~gvD 182 (655)
+++++|||.|+ | -|.++..++|.-+. +|.+++.+++-.+.+++ +... ...+..+ . -..|..+.+++. .+.+|
T Consensus 90 ~~pkrVLiIGg-G-~G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~~Da~~~l~~~~~~~yD 167 (308)
T PLN02366 90 PNPKKVLVVGG-G-DGGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHIGDGVEFLKNAPEGTYD 167 (308)
T ss_pred CCCCeEEEEcC-C-ccHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEEChHHHHHhhccCCCCC
Confidence 56789999997 3 36677888888665 78889988877777765 2210 0010000 0 001344445544 34799
Q ss_pred EEEeCCCcc--------hHHHHHHHHHHhccccceEEE
Q psy14589 183 ADHPGFTDP--------VYRARRKYFADLAFNYKHFFF 212 (655)
Q Consensus 183 vV~D~vG~~--------~~~~l~~~l~~l~~gGrlv~v 212 (655)
+|+--...+ +-+-++.+.++|+++|.++.-
T Consensus 168 vIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pgGvlv~q 205 (308)
T PLN02366 168 AIIVDSSDPVGPAQELFEKPFFESVARALRPGGVVCTQ 205 (308)
T ss_pred EEEEcCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEC
Confidence 986433221 112367888899999998763
No 499
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=93.39 E-value=0.41 Score=53.26 Aligned_cols=76 Identities=13% Similarity=0.060 Sum_probs=54.3
Q ss_pred CCCEEEEEcC----------------CCchHHHHHHHHHHcCCeEEEEecChHHHHHHHhCCCcEEEeCCccchhHHHHH
Q psy14589 110 EPDTLFIIGA----------------NRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYGLGADYVVDHTIRELDRFANQ 173 (655)
Q Consensus 110 ~Gd~VLI~Ga----------------sGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~LGAd~vId~~~~~~~d~~~~ 173 (655)
.|.+|+|+|| ||.+|.++++.+..+|++|+.+++..+ .+ ...|. ..+|.++. ++..+.
T Consensus 187 ~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~--~~~~~-~~~dv~~~--~~~~~~ 260 (399)
T PRK05579 187 AGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LP--TPAGV-KRIDVESA--QEMLDA 260 (399)
T ss_pred CCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-cc--CCCCc-EEEccCCH--HHHHHH
Confidence 7899999999 666999999999999999998876542 11 11232 35666553 356666
Q ss_pred HHhcCCCeeEEEeCCCcc
Q psy14589 174 ILSYGSELDADHPGFTDP 191 (655)
Q Consensus 174 i~~~~~gvDvV~D~vG~~ 191 (655)
+.+.-+.+|+++.++|-.
T Consensus 261 v~~~~~~~DilI~~Aav~ 278 (399)
T PRK05579 261 VLAALPQADIFIMAAAVA 278 (399)
T ss_pred HHHhcCCCCEEEEccccc
Confidence 665545789999887644
No 500
>PF13659 Methyltransf_26: Methyltransferase domain; PDB: 3GJY_A 3LPM_B 2NP6_D 1AQI_B 2ADM_B 2IH2_A 2JG3_A 2IBS_D 2NP7_A 2IBT_A ....
Probab=93.39 E-value=0.59 Score=41.63 Aligned_cols=95 Identities=16% Similarity=-0.035 Sum_probs=60.6
Q ss_pred CCEEEEEcCCCchHHHHHHHHHHcCCeEEEEecChHHHHHHHh----CCCc---EEEeCCccchhHHHHHHHhc-CCCee
Q psy14589 111 PDTLFIIGANRGNGLAAIQVGKAYGLTVFASVGCPVGVAKAYG----LGAD---YVVDHTIRELDRFANQILSY-GSELD 182 (655)
Q Consensus 111 Gd~VLI~GasGgVG~~avQlAk~~Ga~Viat~~s~~k~~~a~~----LGAd---~vId~~~~~~~d~~~~i~~~-~~gvD 182 (655)
|.+|+-.|+ |.|..++.+++....++++++.++...+.++. .+.+ .++. . |+.+..... .+.+|
T Consensus 1 g~~vlD~~~--G~G~~~~~~~~~~~~~~~gvdi~~~~~~~a~~~~~~~~~~~~~~~~~---~---D~~~~~~~~~~~~~D 72 (117)
T PF13659_consen 1 GDRVLDPGC--GSGTFLLAALRRGAARVTGVDIDPEAVELARRNLPRNGLDDRVEVIV---G---DARDLPEPLPDGKFD 72 (117)
T ss_dssp TEEEEEETS--TTCHHHHHHHHHCTCEEEEEESSHHHHHHHHHHCHHCTTTTTEEEEE---S---HHHHHHHTCTTT-EE
T ss_pred CCEEEEcCc--chHHHHHHHHHHCCCeEEEEEECHHHHHHHHHHHHHccCCceEEEEE---C---chhhchhhccCceeE
Confidence 678887776 55556666666654799999999988777753 4442 2222 1 444444333 24899
Q ss_pred EEEeCCCcc------------hHHHHHHHHHHhccccceEEEe
Q psy14589 183 ADHPGFTDP------------VYRARRKYFADLAFNYKHFFFF 213 (655)
Q Consensus 183 vV~D~vG~~------------~~~~l~~~l~~l~~gGrlv~v~ 213 (655)
+|+-...-. ..+.++.+.+.|++||+++++.
T Consensus 73 ~Iv~npP~~~~~~~~~~~~~~~~~~~~~~~~~L~~gG~~~~~~ 115 (117)
T PF13659_consen 73 LIVTNPPYGPRSGDKAALRRLYSRFLEAAARLLKPGGVLVFIT 115 (117)
T ss_dssp EEEE--STTSBTT----GGCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEECCCCccccccchhhHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 998532111 1244788999999999998864
Done!