BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14591
(164 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9VUC6|Y2138_DROME Formin-like protein CG32138 OS=Drosophila melanogaster GN=CG32138
PE=1 SV=3
Length = 1183
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 54/78 (69%), Positives = 62/78 (79%), Gaps = 1/78 (1%)
Query: 82 SLGHQRPSL-DLASSPSVKKRSRHAARLNMGDPKDDIHVCILCLRAIMNNKYGLNMVIKH 140
S G RP++ D SPS+K+RSRH A+LNMG DDIHV I+CLRAIMNNKYG NMVI+H
Sbjct: 281 SYGFLRPTIADALDSPSLKRRSRHIAKLNMGAATDDIHVSIMCLRAIMNNKYGFNMVIQH 340
Query: 141 TEAINSIALSLMHKSLRA 158
EAIN IALSL+HKSLR
Sbjct: 341 REAINCIALSLIHKSLRT 358
>sp|A2APV2|FMNL2_MOUSE Formin-like protein 2 OS=Mus musculus GN=Fmnl2 PE=2 SV=2
Length = 1086
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 57/94 (60%), Gaps = 4/94 (4%)
Query: 65 EGLPASTNPPANVISPQSLGHQRPSLDLASSPSVKKRSRHAARLNMGDPKDDIHVCILCL 124
E L +N P+ V + S + +L + PS +R+ +RL KDD+HVCI+CL
Sbjct: 173 EDLHRGSNLPSPVGNSVSRSGRHSALRYNTLPS--RRTLKNSRL--VSKKDDVHVCIMCL 228
Query: 125 RAIMNNKYGLNMVIKHTEAINSIALSLMHKSLRA 158
RAIMN +YG NMV+ H A+N IALSL +K+ R
Sbjct: 229 RAIMNYQYGFNMVMSHPHAVNEIALSLNNKNPRT 262
>sp|Q96PY5|FMNL2_HUMAN Formin-like protein 2 OS=Homo sapiens GN=FMNL2 PE=1 SV=3
Length = 1086
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 57/94 (60%), Gaps = 4/94 (4%)
Query: 65 EGLPASTNPPANVISPQSLGHQRPSLDLASSPSVKKRSRHAARLNMGDPKDDIHVCILCL 124
E L +N P+ V + S + +L + PS +R+ +RL KDD+HVCI+CL
Sbjct: 173 EDLHRGSNLPSPVGNSVSRSGRHSALRYNTLPS--RRTLKNSRL--VSKKDDVHVCIMCL 228
Query: 125 RAIMNNKYGLNMVIKHTEAINSIALSLMHKSLRA 158
RAIMN +YG NMV+ H A+N IALSL +K+ R
Sbjct: 229 RAIMNYQYGFNMVMSHPHAVNEIALSLNNKNPRT 262
>sp|Q6ZPF4|FMNL3_MOUSE Formin-like protein 3 OS=Mus musculus GN=Fmnl3 PE=1 SV=2
Length = 1028
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 36/45 (80%)
Query: 114 KDDIHVCILCLRAIMNNKYGLNMVIKHTEAINSIALSLMHKSLRA 158
KDD+HVCILCLRAIMN +YG N+V+ H A+N IALSL +K+ R
Sbjct: 221 KDDVHVCILCLRAIMNYQYGFNLVMSHPHAVNEIALSLNNKNPRT 265
>sp|Q8IVF7|FMNL3_HUMAN Formin-like protein 3 OS=Homo sapiens GN=FMNL3 PE=1 SV=3
Length = 1028
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 36/45 (80%)
Query: 114 KDDIHVCILCLRAIMNNKYGLNMVIKHTEAINSIALSLMHKSLRA 158
KDD+HVCILCLRAIMN +YG N+V+ H A+N IALSL +K+ R
Sbjct: 221 KDDVHVCILCLRAIMNYQYGFNLVMSHPHAVNEIALSLNNKNPRT 265
>sp|Q9JL26|FMNL_MOUSE Formin-like protein 1 OS=Mus musculus GN=Fmnl1 PE=1 SV=1
Length = 1094
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 34/45 (75%)
Query: 114 KDDIHVCILCLRAIMNNKYGLNMVIKHTEAINSIALSLMHKSLRA 158
KDD+HVCI+CLRAIMN + G ++V+ H +N IALSL +KS R
Sbjct: 223 KDDVHVCIMCLRAIMNYQSGFSLVMNHPACVNEIALSLNNKSPRT 267
>sp|O95466|FMNL_HUMAN Formin-like protein 1 OS=Homo sapiens GN=FMNL1 PE=1 SV=3
Length = 1100
Score = 63.2 bits (152), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 62/114 (54%), Gaps = 11/114 (9%)
Query: 45 ERTEEEGGEEEEEEEEEEEEEGLPASTNPPANVISPQSLGHQRPSLDLASSPSVKKRSRH 104
E T+ E+ + E+ E L S PP++V P+S H L A S + SR
Sbjct: 166 ESTDNGASNSEKNKPLEQSVEDL--SKGPPSSV--PKS-RHLTIKLTPAHSRKALRNSRI 220
Query: 105 AARLNMGDPKDDIHVCILCLRAIMNNKYGLNMVIKHTEAINSIALSLMHKSLRA 158
++ KDD+HVCI+CLRAIMN + G ++V+ H +N IALSL +K+ R
Sbjct: 221 VSQ------KDDVHVCIMCLRAIMNYQSGFSLVMNHPACVNEIALSLNNKNPRT 268
>sp|B2ZX90|FAS1_ORYSJ Chromatin assembly factor 1 subunit FSM OS=Oryza sativa subsp.
japonica GN=FSM PE=2 SV=1
Length = 940
Score = 31.2 bits (69), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 41/62 (66%), Gaps = 6/62 (9%)
Query: 6 EALRTCERKLKEEEEVKGQRKKAEE--KKKKKRR----AEGRGGGERTEEEGGEEEEEEE 59
EALR +R+ KEE E+K Q++K EE +K++KRR AE R ++ +EE +E++ E
Sbjct: 365 EALREQKRREKEEAEMKKQQRKQEEEAQKEQKRREKEEAETRKQQKKQQEEAEKEQKRRE 424
Query: 60 EE 61
+E
Sbjct: 425 KE 426
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.309 0.128 0.349
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,748,610
Number of Sequences: 539616
Number of extensions: 3344303
Number of successful extensions: 117684
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 2530
Number of HSP's successfully gapped in prelim test: 1174
Number of HSP's that attempted gapping in prelim test: 49937
Number of HSP's gapped (non-prelim): 36347
length of query: 164
length of database: 191,569,459
effective HSP length: 108
effective length of query: 56
effective length of database: 133,290,931
effective search space: 7464292136
effective search space used: 7464292136
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 56 (26.2 bits)