Query psy14591
Match_columns 164
No_of_seqs 123 out of 150
Neff 2.6
Searched_HMMs 29240
Date Fri Aug 16 23:50:36 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14591.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14591hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2f31_A Diaphanous protein homo 99.5 1.1E-14 3.7E-19 115.9 2.1 51 113-163 67-117 (233)
2 3eg5_B Protein diaphanous homo 99.3 2E-13 6.9E-18 116.8 2.2 52 112-163 132-183 (383)
3 2bnx_A Diaphanous protein homo 99.3 2E-13 7E-18 116.7 2.1 51 113-163 71-121 (386)
4 3dad_A FH1/FH2 domain-containi 79.7 0.91 3.1E-05 39.6 2.5 39 119-157 179-217 (339)
5 2qk2_A LP04448P; mini spindles 21.8 36 0.0012 25.1 1.5 39 118-163 116-154 (242)
6 4db6_A Armadillo repeat protei 20.7 49 0.0017 23.1 1.9 47 114-161 26-73 (210)
7 4db8_A Armadillo-repeat protei 20.1 69 0.0024 23.0 2.7 47 113-160 25-72 (252)
8 4hxt_A De novo protein OR329; 19.4 63 0.0021 22.7 2.3 47 117-163 145-191 (252)
9 4db6_A Armadillo repeat protei 19.0 68 0.0023 22.4 2.4 47 117-163 155-201 (210)
10 4hxt_A De novo protein OR329; 17.6 72 0.0025 22.4 2.2 47 117-163 187-233 (252)
No 1
>2f31_A Diaphanous protein homolog 1; formin,MDIA1, protein-protein complex, armadillo repeats, structural protein; 2.10A {Mus musculus}
Probab=99.46 E-value=1.1e-14 Score=115.87 Aligned_cols=51 Identities=24% Similarity=0.363 Sum_probs=48.7
Q ss_pred CCcchHHHHHHHHHHhccHHhHHHHhcchhHHHHHHHHhcCCCcceeeccc
Q psy14591 113 PKDDIHVCILCLRAIMNNKYGLNMVIKHTEAINSIALSLMHKSLRATLFDF 163 (164)
Q Consensus 113 ~kd~qHeCIrCLKAIMNNKyGl~~VLsH~eaIn~IAlSLds~NprTKaLVL 163 (164)
+.+.+|.||+||||||||++|++.|++|+++|+.||+||++++++||++|+
T Consensus 67 ~~~~~~~~l~CLkalmn~~~G~~~vl~~~~~i~~l~~~L~s~~~~~r~~~l 117 (233)
T 2f31_A 67 DSRNQHEIIRCLKAFMNNKFGIKTMLETEEGILLLVRAMDPAVPNMMIDAA 117 (233)
T ss_dssp HHHHHHHHHHHHHHHTSSHHHHHHHHTSSSHHHHHHTTCCTTSHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCChHHHHHHHcCcHHHHHHHHHhCCCCchHHHHHH
Confidence 468899999999999999999999999999999999999999999999875
No 2
>3eg5_B Protein diaphanous homolog 1; protein-protein complex, RHO proteins, formins, armadillo repeat, G-protein, GTPase, alternative splicing; HET: GNP; 2.70A {Mus musculus} SCOP: a.118.1.23 PDB: 1z2c_B*
Probab=99.34 E-value=2e-13 Score=116.84 Aligned_cols=52 Identities=23% Similarity=0.338 Sum_probs=48.5
Q ss_pred CCCcchHHHHHHHHHHhccHHhHHHHhcchhHHHHHHHHhcCCCcceeeccc
Q psy14591 112 DPKDDIHVCILCLRAIMNNKYGLNMVIKHTEAINSIALSLMHKSLRATLFDF 163 (164)
Q Consensus 112 s~kd~qHeCIrCLKAIMNNKyGl~~VLsH~eaIn~IAlSLds~NprTKaLVL 163 (164)
.+.+.+|.||+||||||||++|++.|++|+++|+.||+||++++++||++|+
T Consensus 132 ~d~~~q~~~l~CLkalmN~~~G~~~vl~~~~~i~~l~~~L~s~~~~~~~~al 183 (383)
T 3eg5_B 132 YDSRNQHEIIRCLKAFMNNKFGIKTMLETEEGILLLVRAMDPAVPNMMIDAA 183 (383)
T ss_dssp -CHHHHHHHHHHHHHHTSSHHHHHHHHTCSSHHHHHHHTCCTTSHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHhcchhhHHHHHcChHHHHHHHHHhCCCchHHHHHHH
Confidence 3568899999999999999999999999999999999999999999999875
No 3
>2bnx_A Diaphanous protein homolog 1; autoinhibition, actin, nucleation, cytoskeleton, structural; 2.4A {Mus musculus} SCOP: a.118.1.23 PDB: 3o4x_A 3obv_A* 2bap_B
Probab=99.34 E-value=2e-13 Score=116.70 Aligned_cols=51 Identities=24% Similarity=0.363 Sum_probs=48.7
Q ss_pred CCcchHHHHHHHHHHhccHHhHHHHhcchhHHHHHHHHhcCCCcceeeccc
Q psy14591 113 PKDDIHVCILCLRAIMNNKYGLNMVIKHTEAINSIALSLMHKSLRATLFDF 163 (164)
Q Consensus 113 ~kd~qHeCIrCLKAIMNNKyGl~~VLsH~eaIn~IAlSLds~NprTKaLVL 163 (164)
+.+.+|.||+||||||||++|++.|++|+.+|+.|++||++++++||++||
T Consensus 71 d~~~~~~~l~CLkalmN~~~Gl~~vl~~~~~i~~l~~sL~s~~~~~r~~vl 121 (386)
T 2bnx_A 71 DSRNQHEIIRCLKAFMNNKFGIKTMLETEEGILLLVRAMDPAVPNMMIDAA 121 (386)
T ss_dssp HHHHHHHHHHHHHHHTSSHHHHHHHHHSSSHHHHHHHTCCTTSHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHcCcHHHHHHHHHhCCCCchHHHHHH
Confidence 468899999999999999999999999999999999999999999999875
No 4
>3dad_A FH1/FH2 domain-containing protein 1; formin, FHOD1, GTPase-binding domain, ubiquitin-superfold, armadillo repeats, actin-binding, coiled coil; 2.30A {Homo sapiens}
Probab=79.68 E-value=0.91 Score=39.57 Aligned_cols=39 Identities=18% Similarity=0.087 Sum_probs=34.1
Q ss_pred HHHHHHHHHhccHHhHHHHhcchhHHHHHHHHhcCCCcc
Q psy14591 119 VCILCLRAIMNNKYGLNMVIKHTEAINSIALSLMHKSLR 157 (164)
Q Consensus 119 eCIrCLKAIMNNKyGl~~VLsH~eaIn~IAlSLds~Npr 157 (164)
-++++|..||.+-+|.+.|++|++-|..|+.-+++..+.
T Consensus 179 Y~L~AL~~LM~~v~Gm~gvvs~~~fI~~lyslv~s~~~~ 217 (339)
T 3dad_A 179 YILRALGQLMLFVDGMLGVVAHSDTIQWLYTLCASLSRL 217 (339)
T ss_dssp HHHHHHHHHTTSHHHHHHHHHCHHHHHHHHHGGGCSCHH
T ss_pred HHHHHHHHHHhccccccchhCCHHHHHHHHHHHcCccHH
Confidence 377889999999999999999999999999988865443
No 5
>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster}
Probab=21.77 E-value=36 Score=25.09 Aligned_cols=39 Identities=21% Similarity=0.083 Sum_probs=26.9
Q ss_pred HHHHHHHHHHhccHHhHHHHhcchhHHHHHHHHhcCCCcceeeccc
Q psy14591 118 HVCILCLRAIMNNKYGLNMVIKHTEAINSIALSLMHKSLRATLFDF 163 (164)
Q Consensus 118 HeCIrCLKAIMNNKyGl~~VLsH~eaIn~IAlSLds~NprTKaLVL 163 (164)
..+..||.+|+.+- ++.. .+..|..+|.++|+.+|..++
T Consensus 116 ~~a~~aL~~~~~~~-~~~~------ll~~l~~~l~~~~~~vr~~~l 154 (242)
T 2qk2_A 116 TALREAIDAIYAST-SLEA------QQESIVESLSNKNPSVKSETA 154 (242)
T ss_dssp HHHHHHHHHHHTTS-CHHH------HHHHHHHHTTCSCHHHHHHHH
T ss_pred HHHHHHHHHHHHcC-CHHH------HHHHHHHHHcCCChHHHHHHH
Confidence 34888999998753 3433 455577788888888776553
No 6
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=20.68 E-value=49 Score=23.14 Aligned_cols=47 Identities=13% Similarity=0.135 Sum_probs=31.9
Q ss_pred CcchHHHHHHHHHHh-ccHHhHHHHhcchhHHHHHHHHhcCCCcceeec
Q psy14591 114 KDDIHVCILCLRAIM-NNKYGLNMVIKHTEAINSIALSLMHKSLRATLF 161 (164)
Q Consensus 114 kd~qHeCIrCLKAIM-NNKyGl~~VLsH~eaIn~IAlSLds~NprTKaL 161 (164)
.+.+..+..+|..|. .+......++.. .+|..|...|.+.++.++..
T Consensus 26 ~~v~~~a~~~L~~l~~~~~~~~~~i~~~-g~i~~L~~lL~~~~~~v~~~ 73 (210)
T 4db6_A 26 QQELQSALRKLSQIASGGNEQIQAVIDA-GALPALVQLLSSPNEQILQE 73 (210)
T ss_dssp HHHHHHHHHHHHHHHTSCHHHHHHHHHT-THHHHHHHHTTCSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHc-CCHHHHHHHHcCCCHHHHHH
Confidence 344556778888887 445555555544 68899999998888766543
No 7
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=20.08 E-value=69 Score=22.96 Aligned_cols=47 Identities=11% Similarity=0.082 Sum_probs=32.1
Q ss_pred CCcchHHHHHHHHHHhc-cHHhHHHHhcchhHHHHHHHHhcCCCcceee
Q psy14591 113 PKDDIHVCILCLRAIMN-NKYGLNMVIKHTEAINSIALSLMHKSLRATL 160 (164)
Q Consensus 113 ~kd~qHeCIrCLKAIMN-NKyGl~~VLsH~eaIn~IAlSLds~NprTKa 160 (164)
+.+.+..++.||+.++- +......++. ..+|..|...|.+.++.++.
T Consensus 25 ~~~~~~~a~~~L~~~l~~~~~~~~~~~~-~g~i~~L~~lL~~~~~~v~~ 72 (252)
T 4db8_A 25 DMQEQLSATRKFSQILSDGNEQIQAVID-AGALPALVQLLSSPNEQILQ 72 (252)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHHHHHHH-TTHHHHHHHGGGCSCHHHHH
T ss_pred CHHHHHHHHHHHHHHHcCCCchHHHHHH-cCcHHHHHHHHcCCCHHHHH
Confidence 45677888999976554 3344444444 46888899999888766543
No 8
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=19.37 E-value=63 Score=22.75 Aligned_cols=47 Identities=9% Similarity=-0.059 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHhccHHhHHHHhcchhHHHHHHHHhcCCCcceeeccc
Q psy14591 117 IHVCILCLRAIMNNKYGLNMVIKHTEAINSIALSLMHKSLRATLFDF 163 (164)
Q Consensus 117 qHeCIrCLKAIMNNKyGl~~VLsH~eaIn~IAlSLds~NprTKaLVL 163 (164)
+..++.||..|.-........+.+..+|..|...|.+.++.++..++
T Consensus 145 ~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~ 191 (252)
T 4hxt_A 145 QKEAARALANIASGPDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAA 191 (252)
T ss_dssp HHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHCcCHHHHHHHHCCCCHHHHHHHH
No 9
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=18.95 E-value=68 Score=22.40 Aligned_cols=47 Identities=11% Similarity=0.111 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHhccHHhHHHHhcchhHHHHHHHHhcCCCcceeeccc
Q psy14591 117 IHVCILCLRAIMNNKYGLNMVIKHTEAINSIALSLMHKSLRATLFDF 163 (164)
Q Consensus 117 qHeCIrCLKAIMNNKyGl~~VLsH~eaIn~IAlSLds~NprTKaLVL 163 (164)
+..++.||..|..+.......+....+|..|...|.+.++.++..++
T Consensus 155 ~~~a~~aL~~l~~~~~~~~~~~~~~g~i~~L~~ll~~~~~~v~~~a~ 201 (210)
T 4db6_A 155 LQEALWALSNIASGGNEQKQAVKEAGALEKLEQLQSHENEKIQKEAQ 201 (210)
T ss_dssp HHHHHHHHHHHHTSCHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCcHHHHHHHHCCCHHHHHHHHhCCCHHHHHHHH
No 10
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=17.55 E-value=72 Score=22.43 Aligned_cols=47 Identities=9% Similarity=-0.048 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHhccHHhHHHHhcchhHHHHHHHHhcCCCcceeeccc
Q psy14591 117 IHVCILCLRAIMNNKYGLNMVIKHTEAINSIALSLMHKSLRATLFDF 163 (164)
Q Consensus 117 qHeCIrCLKAIMNNKyGl~~VLsH~eaIn~IAlSLds~NprTKaLVL 163 (164)
+..++.||..|.-........+....++..|...|.+.++.++..++
T Consensus 187 ~~~a~~~L~~l~~~~~~~~~~l~~~~~i~~L~~ll~~~~~~v~~~a~ 233 (252)
T 4hxt_A 187 QKEAARALANIASGPTSAIKAIVDAGGVEVLQKLLTSTDSEVQKEAQ 233 (252)
T ss_dssp HHHHHHHHHHHTTSBHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHCCCcHHHHHHHH
Done!