RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy14591
(164 letters)
>d2bnxa1 a.118.1.23 (A:133-475) Diaphanous protein homolog 1, Diap1
(Dia1, DRF1) {Mouse (Mus musculus) [TaxId: 10090]}
Length = 343
Score = 47.2 bits (112), Expect = 1e-07
Identities = 13/59 (22%), Positives = 25/59 (42%)
Query: 99 KKRSRHAARLNMGDPKDDIHVCILCLRAIMNNKYGLNMVIKHTEAINSIALSLMHKSLR 157
K+ + + H I CL+A MNNK+G+ +++ E I + ++
Sbjct: 55 KRLHDEKEETSGNYDSRNQHEIIRCLKAFMNNKFGIKTMLETEEGILLLVRAMDPAVPN 113
>d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid
3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId:
29760]}
Length = 450
Score = 32.8 bits (73), Expect = 0.015
Identities = 9/41 (21%), Positives = 17/41 (41%)
Query: 3 LGVEALRTCERKLKEEEEVKGQRKKAEEKKKKKRRAEGRGG 43
L +C ++ +E+ K R+ ++ RA G G
Sbjct: 391 FTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKG 431
>d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale
cress (Arabidopsis thaliana) [TaxId: 3702]}
Length = 471
Score = 32.4 bits (72), Expect = 0.023
Identities = 13/38 (34%), Positives = 17/38 (44%)
Query: 6 EALRTCERKLKEEEEVKGQRKKAEEKKKKKRRAEGRGG 43
E + + L E EE KG R K +E K+ R G
Sbjct: 412 EEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDG 449
>d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase
{Medicago truncatula [TaxId: 3880]}
Length = 473
Score = 32.1 bits (71), Expect = 0.023
Identities = 11/43 (25%), Positives = 18/43 (41%)
Query: 1 MRLGVEALRTCERKLKEEEEVKGQRKKAEEKKKKKRRAEGRGG 43
+ E L ++ ++ K ++KA E KKK GG
Sbjct: 415 TNVKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGG 457
>d2ayua1 d.305.1.1 (A:70-370) Nucleosome assembly protein, NAP
{Baker's yeast (Saccharomyces cerevisiae) [TaxId:
4932]}
Length = 301
Score = 30.0 bits (67), Expect = 0.12
Identities = 16/72 (22%), Positives = 30/72 (41%), Gaps = 8/72 (11%)
Query: 5 VEALRTCERKLKE-----EEEVKGQRKKAEEKKK---KKRRAEGRGGGERTEEEGGEEEE 56
+ +L+T + +L E + E+ K +K K ++R G + E+ + +E
Sbjct: 27 LLSLKTLQSELFEVEKEFQVEMFELENKFLQKYKPIWEQRSRIISGQEQPKPEQIAKGQE 86
Query: 57 EEEEEEEEEGLP 68
E E E L
Sbjct: 87 IVESLNETELLV 98
>d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase
UGT71G1 {Medicago truncatula [TaxId: 3880]}
Length = 461
Score = 27.4 bits (59), Expect = 1.0
Identities = 10/41 (24%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Query: 3 LGVEALRTCERKLKEEEEVKGQRKKAEEKKKKKRRAEGRGG 43
+ E + + L +++ KK +E K+ R A GG
Sbjct: 408 VAAEEIEKGLKDLMDKD--SIVHKKVQEMKEMSRNAVVDGG 446
>d1v9da_ a.207.1.1 (A:) Diaphanous protein homolog 1, dia1 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 332
Score = 26.9 bits (59), Expect = 1.2
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 12 ERKLKEEEEVKGQRKKAEEKKKKKR 36
+K +E EE + K A+EK +K+R
Sbjct: 307 NQKRRETEEKMRRAKLAKEKAEKER 331
Score = 24.5 bits (53), Expect = 8.0
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 12 ERKLKEEEEVKGQRKKAEEKKKKKRR 37
E + + E E K +R K ++K +K R
Sbjct: 306 ENQKRRETEEKMRRAKLAKEKAEKER 331
>d1jfib_ a.22.1.3 (B:) Negative cofactor 2, NC2, beta chain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 135
Score = 26.0 bits (57), Expect = 1.7
Identities = 10/57 (17%), Positives = 25/57 (43%)
Query: 8 LRTCERKLKEEEEVKGQRKKAEEKKKKKRRAEGRGGGERTEEEGGEEEEEEEEEEEE 64
+ + L+E + V +R+KA + + E ++ E +++ E ++E
Sbjct: 76 ISEVKEVLQECKTVALKRRKASSRLENLGIPEEELLRQQQELFAKARQQQAELAQQE 132
>d1tnsa_ a.6.1.7 (A:) mu transposase, DNA-binding domain
{Bacteriophage mu [TaxId: 10677]}
Length = 76
Score = 24.4 bits (53), Expect = 3.3
Identities = 7/28 (25%), Positives = 12/28 (42%)
Query: 21 VKGQRKKAEEKKKKKRRAEGRGGGERTE 48
G A+++ + R G GG+ E
Sbjct: 20 SAGVIYVAKKQGWQNRTRAGVKGGKAIE 47
>d1qpma_ a.6.1.7 (A:) mu transposase, DNA-binding domain
{Bacteriophage mu [TaxId: 10677]}
Length = 69
Score = 24.0 bits (52), Expect = 4.2
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 21 VKGQRKKAEEKKKKKRRAEGRGGGERTE 48
V G +A + KR+ EG GG+ E
Sbjct: 20 VAGVHYRANVQGWTKRKKEGVKGGKAVE 47
>d1p32a_ d.25.1.1 (A:) Acidic mitochondrial matrix protein p32
{Human (Homo sapiens) [TaxId: 9606]}
Length = 209
Score = 24.5 bits (53), Expect = 6.3
Identities = 8/31 (25%), Positives = 14/31 (45%)
Query: 47 TEEEGGEEEEEEEEEEEEEGLPASTNPPANV 77
GEEE + ++ EE+ ++ P V
Sbjct: 67 PPTFDGEEEPSQGQKVEEQEPELTSTPNFVV 97
>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 503
Score = 24.3 bits (51), Expect = 8.5
Identities = 10/53 (18%), Positives = 25/53 (47%), Gaps = 7/53 (13%)
Query: 13 RKLKEEEEVKGQRKKAEEKKKKKRRAEGRGGGERTEEEGGEEEEEEEEEEEEE 65
R+ ++ ++V+ ++ K +E K+R +G + +EE+E +
Sbjct: 22 RRRRDTQQVELRKAKRDEALAKRRN-------FIPPTDGADSDEEDESSVSAD 67
>d1ng2a2 b.34.2.1 (A:215-332) p47pox (neutrophil cytosolic factor 1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 118
Score = 23.9 bits (51), Expect = 8.7
Identities = 9/47 (19%), Positives = 18/47 (38%)
Query: 53 EEEEEEEEEEEEEGLPASTNPPANVISPQSLGHQRPSLDLASSPSVK 99
++ + + + + G P + N S +R S D SV+
Sbjct: 70 GQDVSQAQRQIKRGAPPRRSSIRNAHSIHQRSRKRLSQDAYRRNSVR 116
>d2v3ka1 c.116.1.6 (A:25-251) Essential for mitotic growth 1, EMG1
{Saccharomyces cerevisiae [TaxId: 4932]}
Length = 227
Score = 24.0 bits (52), Expect = 8.8
Identities = 12/44 (27%), Positives = 16/44 (36%), Gaps = 4/44 (9%)
Query: 103 RHAARLNMGDPKD---DI-HVCILCLRAIMNNKYGLNMVIKHTE 142
+ + D + DI H C+L L NK G V T
Sbjct: 50 QGLLKKMGRDISEARPDITHQCLLTLLDSPINKAGKLQVYIQTS 93
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.309 0.128 0.349
Gapped
Lambda K H
0.267 0.0634 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 588,305
Number of extensions: 27331
Number of successful extensions: 205
Number of sequences better than 10.0: 1
Number of HSP's gapped: 165
Number of HSP's successfully gapped: 54
Length of query: 164
Length of database: 2,407,596
Length adjustment: 79
Effective length of query: 85
Effective length of database: 1,322,926
Effective search space: 112448710
Effective search space used: 112448710
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 49 (22.9 bits)