BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14597
(191 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9NRX2|RM17_HUMAN 39S ribosomal protein L17, mitochondrial OS=Homo sapiens GN=MRPL17
PE=1 SV=1
Length = 175
Score = 91.7 bits (226), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 91/166 (54%), Gaps = 20/166 (12%)
Query: 12 RLRIPILAKHRRL--RNPEGPQGRVKKLRSIVTALLKYERIEVYHYDGDEAR-------- 61
RL + H R+ R GP+ R+ LR+++T L+++ERIE DE R
Sbjct: 2 RLSVAAAISHGRVFRRMGLGPESRIHLLRNLLTGLVRHERIEAPWARVDEMRGYAEKLID 61
Query: 62 -----DTHKETMDMADFWIEEKNIVHKLFKVLVPRFQNTTVSYTRAYNAPIPHATPEKSD 116
DT++ M MADFW+ EK+++ KLF+VL PR+++ T YTR IP+ + +++
Sbjct: 62 YGKLGDTNERAMRMADFWLTEKDLIPKLFQVLAPRYKDQTGGYTRMLQ--IPNRSLDRAK 119
Query: 117 LSFHSVIELRGNPFPPLVQRAVDSRLHIQNVLLDEAKKEYRAQKYA 162
+ +VIE +GN PPL DS L + N LL +++ R + A
Sbjct: 120 M---AVIEYKGNCLPPLPLPRRDSHLTLLNQLLQGLRQDLRQSQEA 162
>sp|Q9D8P4|RM17_MOUSE 39S ribosomal protein L17, mitochondrial OS=Mus musculus GN=Mrpl17
PE=1 SV=1
Length = 176
Score = 87.4 bits (215), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 67/118 (56%), Gaps = 17/118 (14%)
Query: 29 GPQGRVKKLRSIVTALLKYERIEVYHYDGDEAR-------------DTHKETMDMADFWI 75
GP+ R+ LR+++T L+++ERIE DE R DT++ M MADFW+
Sbjct: 21 GPESRIHLLRNLLTGLVRHERIEATWARADEMRGYAEKLIDYGKLGDTNERAMRMADFWL 80
Query: 76 EEKNIVHKLFKVLVPRFQNTTVSYTRAYNAPIPHATPEKSDLSFHSVIELRGNPFPPL 133
EK+++ KLFKVL PRFQ +YTR P ++ D + +VIE +GN PPL
Sbjct: 81 TEKDLIPKLFKVLAPRFQGQNGNYTRMLQIP----NRKEQDRAKMAVIEYKGNYLPPL 134
>sp|Q3T0L3|RM17_BOVIN 39S ribosomal protein L17, mitochondrial OS=Bos taurus GN=MRPL17
PE=1 SV=1
Length = 172
Score = 87.4 bits (215), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 76/143 (53%), Gaps = 17/143 (11%)
Query: 29 GPQGRVKKLRSIVTALLKYERIEVYHYDGDEAR-------------DTHKETMDMADFWI 75
GP+ R+ L++++T L+++ERIE DE R DT++ M MADFW+
Sbjct: 21 GPESRIHLLQNLLTGLVRHERIEASWARVDELRGYAEKLIDYGKLGDTNERAMRMADFWL 80
Query: 76 EEKNIVHKLFKVLVPRFQNTTVSYTRAYNAPIPHATPEKSDLSFHSVIELRGNPFPPLVQ 135
EK+++ KLF+VL PR+Q YTR P + D + +VIE +GN PPL
Sbjct: 81 TEKDLIPKLFQVLAPRYQGQNGGYTRMLQIP----NRNQQDRAKMAVIEYKGNCLPPLPL 136
Query: 136 RAVDSRLHIQNVLLDEAKKEYRA 158
DS L + N LL +++ A
Sbjct: 137 PRRDSNLTLLNQLLRGLRQDQEA 159
>sp|Q6PDW6|RM17_RAT 39S ribosomal protein L17, mitochondrial OS=Rattus norvegicus
GN=Mrpl17 PE=2 SV=1
Length = 176
Score = 87.0 bits (214), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 67/118 (56%), Gaps = 17/118 (14%)
Query: 29 GPQGRVKKLRSIVTALLKYERIEVYHYDGDEAR-------------DTHKETMDMADFWI 75
GP+ R+ LR+++T L+++ERIE DE R DT++ M MADFW+
Sbjct: 21 GPESRIHLLRNLLTGLVRHERIEATWARVDEMRGYAEKLIDYGKLGDTNERAMRMADFWL 80
Query: 76 EEKNIVHKLFKVLVPRFQNTTVSYTRAYNAPIPHATPEKSDLSFHSVIELRGNPFPPL 133
EK+++ KLFKVL PRFQ +YTR P ++ D + +VIE +GN PPL
Sbjct: 81 TEKDLIPKLFKVLAPRFQGQNGNYTRMLQIP----NRKEQDRAKMAVIEYKGNCLPPL 134
>sp|Q5RCA3|RM17_PONAB 39S ribosomal protein L17, mitochondrial OS=Pongo abelii GN=MRPL17
PE=2 SV=1
Length = 175
Score = 87.0 bits (214), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 87/159 (54%), Gaps = 20/159 (12%)
Query: 12 RLRIPILAKHRRL--RNPEGPQGRVKKLRSIVTALLKYERIEVYHYDGDEAR-------- 61
RL + H R+ R GP+ R+ LR+++T L+++ERIE DE R
Sbjct: 2 RLSVCAAISHGRVFRRMGLGPESRIHLLRNLLTGLVRHERIEAPWARVDEMRGYAEKLID 61
Query: 62 -----DTHKETMDMADFWIEEKNIVHKLFKVLVPRFQNTTVSYTRAYNAPIPHATPEKSD 116
DT++ M MADFW+ EK+++ KLF+VL PR+++ YTR IP+ + +++
Sbjct: 62 YGKLGDTNERAMRMADFWLTEKDLIPKLFQVLAPRYKDQNGGYTRMRQ--IPNRSLDRAK 119
Query: 117 LSFHSVIELRGNPFPPLVQRAVDSRLHIQNVLLDEAKKE 155
+ +VIE +GN PPL DS L + N LL +++
Sbjct: 120 M---AVIEYKGNCLPPLPLPRRDSHLTLLNQLLQGLRQD 155
>sp|B3E858|RL17_GEOLS 50S ribosomal protein L17 OS=Geobacter lovleyi (strain ATCC
BAA-1151 / DSM 17278 / SZ) GN=rplQ PE=3 SV=1
Length = 124
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 16/104 (15%)
Query: 33 RVKKLRSIVTALLKYERIEVYHYDGDEARDTHKETMDM-----------ADFWIEEKNIV 81
R+ R++VT+LL +ERI E R ++ + + A +I EK++V
Sbjct: 17 RIAMFRNMVTSLLNHERIVTTDAKAKEIRSVAEKMITLGKRGDLHAHRQAAAYIREKSVV 76
Query: 82 HKLFKVLVPRFQNTTVSYTRAYNAPIPHATPEKSDLSFHSVIEL 125
KLF + PR+++ YTR I D + SVIEL
Sbjct: 77 TKLFSTIAPRYKDRAGGYTR-----IIKLGQRLGDAASLSVIEL 115
>sp|A1ALW8|RL17_PELPD 50S ribosomal protein L17 OS=Pelobacter propionicus (strain DSM
2379) GN=rplQ PE=3 SV=1
Length = 127
Score = 43.9 bits (102), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 16/112 (14%)
Query: 37 LRSIVTALLKYERIEVYHYDGDEARDTHKETMDM-----------ADFWIEEKNIVHKLF 85
R++VT+L +E+I E R ++ + + A +I EK++V KLF
Sbjct: 21 FRNMVTSLFAHEKITTTDAKAKEIRSVAEKMITLGKRGDLHSTRIAAAFIREKSVVTKLF 80
Query: 86 KVLVPRFQNTTVSYTRAYNAPIPHATPEKSDLSFHSVIELRGNPFPPLVQRA 137
+ PR++ YTR I D + S+IEL F P RA
Sbjct: 81 STIAPRYKERAGGYTR-----IIKVGSRNGDAAPMSIIELVEEEFTPKASRA 127
>sp|Q749B4|RL17_GEOSL 50S ribosomal protein L17 OS=Geobacter sulfurreducens (strain ATCC
51573 / DSM 12127 / PCA) GN=rplQ PE=3 SV=1
Length = 175
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 16/116 (13%)
Query: 33 RVKKLRSIVTALLKYERIEVYHYDGDEARDTHKETMDM-----------ADFWIEEKNIV 81
R+ R++VT+L +ERI E R ++ + + A +I +K +V
Sbjct: 17 RIAMFRNMVTSLFAHERITTTDAKAKELRSIAEKMITLGKRGDLHAVRQAASYIRDKKVV 76
Query: 82 HKLFKVLVPRFQNTTVSYTRAYNAPIPHATPEKSDLSFHSVIELRGNPFPPLVQRA 137
KLF + PR++ YTR I D + SVIEL F V+++
Sbjct: 77 TKLFSTIAPRYKERDGGYTRIIKLGI-----RPGDCAPLSVIELVEEQFEKKVKKS 127
>sp|Q8R7Y3|RL17_THETN 50S ribosomal protein L17 OS=Thermoanaerobacter tengcongensis
(strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4)
GN=rplQ PE=3 SV=1
Length = 112
Score = 41.2 bits (95), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 46/102 (45%), Gaps = 20/102 (19%)
Query: 37 LRSIVTALLKYERIEVYHYDGDEAR-------------DTHKETMDMADFWIEEKNIVHK 83
LR++VT L+YERI E R D H +A +I ++++V K
Sbjct: 17 LRNLVTDFLRYERITTTEARAKEVRKIAEKMITLGKRGDLHARRQALA--YILDESVVKK 74
Query: 84 LFKVLVPRFQNTTVSYTRAYNAPIPHATPEKSDLSFHSVIEL 125
LF + PR++ YTR + P + D + +VIEL
Sbjct: 75 LFDDIAPRYKERNGGYTRIFK-----LGPRRGDGAPLAVIEL 111
>sp|O94345|RM08_SCHPO 54S ribosomal protein L8, mitochondrial OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=mrpl8 PE=3 SV=1
Length = 207
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 19/107 (17%)
Query: 37 LRSIVTALLKYERIEVYHYDGDEARDTHKETMDMA--------------DFWIEEKNIVH 82
LR++VT+L+K+E I+ EA+ ++ + MA E++ +
Sbjct: 21 LRNLVTSLVKHESIQTTWAKAKEAQRFAEKLITMAKRANPQNNRKGLAEGMVFEKETTLK 80
Query: 83 KLFKVLVPRFQNTTVSYTRAYNAPIPHATPEKSDLSFHSVIELRGNP 129
K+F VLVPR+ YTR P P +D + V+E P
Sbjct: 81 KVFDVLVPRYNGRRCGYTRLLKLP-----PRSTDNAPMGVLEFVDGP 122
>sp|A7GJ44|RL17_CLOBL 50S ribosomal protein L17 OS=Clostridium botulinum (strain
Langeland / NCTC 10281 / Type F) GN=rplQ PE=3 SV=1
Length = 113
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 18/119 (15%)
Query: 18 LAKHRRLRNPEGPQGRVKKLRSIVTALLKYERIEVYHYDGDEARDTHKETMDMAD----- 72
+A +R+L P R LR++VT+ LK+ +IE E R ++ + +A
Sbjct: 1 MAGYRKLGRP--TDQRKAMLRNLVTSFLKHGKIETTETRAKETRSIAEKMITLAKRGDLH 58
Query: 73 ------FWIEEKNIVHKLFKVLVPRFQNTTVSYTRAYNAPIPHATPEKSDLSFHSVIEL 125
++ E+ +V +LF+ + P++ YTR Y P + D + ++EL
Sbjct: 59 ARRQVLSFVTEETVVQRLFEEIAPKYAERNGGYTRIYKVG-----PRRGDGAEVVILEL 112
>sp|B1IGC4|RL17_CLOBK 50S ribosomal protein L17 OS=Clostridium botulinum (strain Okra /
Type B1) GN=rplQ PE=3 SV=1
Length = 113
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 18/119 (15%)
Query: 18 LAKHRRLRNPEGPQGRVKKLRSIVTALLKYERIEVYHYDGDEARDTHKETMDMAD----- 72
+A +R+L P R LR++VT+ LK+ +IE E R ++ + +A
Sbjct: 1 MAGYRKLGRP--TDQRKAMLRNLVTSFLKHGKIETTETRAKETRSIAEKMITLAKRGDLH 58
Query: 73 ------FWIEEKNIVHKLFKVLVPRFQNTTVSYTRAYNAPIPHATPEKSDLSFHSVIEL 125
++ E+ +V +LF+ + P++ YTR Y P + D + ++EL
Sbjct: 59 ARRQVLSFVTEETVVQRLFEEIAPKYAERNGGYTRIYKVG-----PRRGDGAEVVILEL 112
>sp|C1FMS1|RL17_CLOBJ 50S ribosomal protein L17 OS=Clostridium botulinum (strain Kyoto /
Type A2) GN=rplQ PE=3 SV=1
Length = 113
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 18/119 (15%)
Query: 18 LAKHRRLRNPEGPQGRVKKLRSIVTALLKYERIEVYHYDGDEARDTHKETMDMAD----- 72
+A +R+L P R LR++VT+ LK+ +IE E R ++ + +A
Sbjct: 1 MAGYRKLGRP--TDQRKAMLRNLVTSFLKHGKIETTETRAKETRSIAEKMITLAKRGDLH 58
Query: 73 ------FWIEEKNIVHKLFKVLVPRFQNTTVSYTRAYNAPIPHATPEKSDLSFHSVIEL 125
++ E+ +V +LF+ + P++ YTR Y P + D + ++EL
Sbjct: 59 ARRQVLSFVTEETVVQRLFEEIAPKYAERNGGYTRIYKVG-----PRRGDGAEVVILEL 112
>sp|A5I7H6|RL17_CLOBH 50S ribosomal protein L17 OS=Clostridium botulinum (strain Hall /
ATCC 3502 / NCTC 13319 / Type A) GN=rplQ PE=3 SV=1
Length = 113
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 18/119 (15%)
Query: 18 LAKHRRLRNPEGPQGRVKKLRSIVTALLKYERIEVYHYDGDEARDTHKETMDMAD----- 72
+A +R+L P R LR++VT+ LK+ +IE E R ++ + +A
Sbjct: 1 MAGYRKLGRP--TDQRKAMLRNLVTSFLKHGKIETTETRAKETRSIAEKMITLAKRGDLH 58
Query: 73 ------FWIEEKNIVHKLFKVLVPRFQNTTVSYTRAYNAPIPHATPEKSDLSFHSVIEL 125
++ E+ +V +LF+ + P++ YTR Y P + D + ++EL
Sbjct: 59 ARRQVLSFVTEETVVQRLFEEIAPKYAERNGGYTRIYKVG-----PRRGDGAEVVILEL 112
>sp|C3KVM1|RL17_CLOB6 50S ribosomal protein L17 OS=Clostridium botulinum (strain 657 /
Type Ba4) GN=rplQ PE=3 SV=1
Length = 113
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 18/119 (15%)
Query: 18 LAKHRRLRNPEGPQGRVKKLRSIVTALLKYERIEVYHYDGDEARDTHKETMDMAD----- 72
+A +R+L P R LR++VT+ LK+ +IE E R ++ + +A
Sbjct: 1 MAGYRKLGRP--TDQRKAMLRNLVTSFLKHGKIETTETRAKETRSIAEKMITLAKRGDLH 58
Query: 73 ------FWIEEKNIVHKLFKVLVPRFQNTTVSYTRAYNAPIPHATPEKSDLSFHSVIEL 125
++ E+ +V +LF+ + P++ YTR Y P + D + ++EL
Sbjct: 59 ARRQVLSFVTEETVVQRLFEEIAPKYAERNGGYTRIYKVG-----PRRGDGAEVVILEL 112
>sp|A7FZ43|RL17_CLOB1 50S ribosomal protein L17 OS=Clostridium botulinum (strain ATCC
19397 / Type A) GN=rplQ PE=3 SV=1
Length = 113
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 18/119 (15%)
Query: 18 LAKHRRLRNPEGPQGRVKKLRSIVTALLKYERIEVYHYDGDEARDTHKETMDMAD----- 72
+A +R+L P R LR++VT+ LK+ +IE E R ++ + +A
Sbjct: 1 MAGYRKLGRP--TDQRKAMLRNLVTSFLKHGKIETTETRAKETRSIAEKMITLAKRGDLH 58
Query: 73 ------FWIEEKNIVHKLFKVLVPRFQNTTVSYTRAYNAPIPHATPEKSDLSFHSVIEL 125
++ E+ +V +LF+ + P++ YTR Y P + D + ++EL
Sbjct: 59 ARRQVLSFVTEETVVQRLFEEIAPKYAERNGGYTRIYKVG-----PRRGDGAEVVILEL 112
>sp|A8ZV83|RL17_DESOH 50S ribosomal protein L17 OS=Desulfococcus oleovorans (strain DSM
6200 / Hxd3) GN=rplQ PE=3 SV=1
Length = 208
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 36/78 (46%), Gaps = 15/78 (19%)
Query: 37 LRSIVTALLKYERIEVYHYDGDEAR-------------DTHKETMDMADFWIEEKNIVHK 83
R++VT+LLK+E+I+ E R D H MA + EKN+VHK
Sbjct: 21 FRNMVTSLLKHEKIQTTDAKAKELRRWADHVITLAKRGDLHARRQVMA--IVREKNVVHK 78
Query: 84 LFKVLVPRFQNTTVSYTR 101
LF RF + YTR
Sbjct: 79 LFAEAAERFGSREGGYTR 96
>sp|A0LIL8|RL17_SYNFM 50S ribosomal protein L17 OS=Syntrophobacter fumaroxidans (strain
DSM 10017 / MPOB) GN=rplQ PE=3 SV=1
Length = 151
Score = 40.0 bits (92), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 46/106 (43%), Gaps = 20/106 (18%)
Query: 33 RVKKLRSIVTALLKYERIEVYHYDGDEAR-------------DTHKETMDMADFWIEEKN 79
R+ R++VT+LL++ERI E R D H MA + EK
Sbjct: 17 RLAMFRNMVTSLLQHERIFTTLPKAKELRRWADWMISLGKRGDLHARRQVMAC--VREKE 74
Query: 80 IVHKLFKVLVPRFQNTTVSYTRAYNAPIPHATPEKSDLSFHSVIEL 125
V K+F L PR+Q+ YTR I A + D S +IEL
Sbjct: 75 TVQKIFAELGPRYQSRPGGYTR-----IVKAGYRRGDASPMCLIEL 115
>sp|B1KSJ5|RL17_CLOBM 50S ribosomal protein L17 OS=Clostridium botulinum (strain Loch
Maree / Type A3) GN=rplQ PE=3 SV=1
Length = 113
Score = 40.0 bits (92), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 18/119 (15%)
Query: 18 LAKHRRLRNPEGPQGRVKKLRSIVTALLKYERIEVYHYDGDEARDTHKETMDMAD----- 72
+A +R+L P R LR++VT+ LK+ +IE E R ++ + +A
Sbjct: 1 MAGYRKLGRP--TDQRKAMLRNLVTSFLKHGKIETTETRAKETRSIAEKMITLAKRGDLH 58
Query: 73 ------FWIEEKNIVHKLFKVLVPRFQNTTVSYTRAYNAPIPHATPEKSDLSFHSVIEL 125
++ E+ +V +LF+ + P++ YTR Y P + D + ++EL
Sbjct: 59 ARRQVLSFVTEEAVVQRLFEEIAPKYAERNGGYTRIYKVG-----PRRGDGAEVVILEL 112
>sp|Q3A6L9|RL17_PELCD 50S ribosomal protein L17 OS=Pelobacter carbinolicus (strain DSM
2380 / Gra Bd 1) GN=rplQ PE=3 SV=1
Length = 155
Score = 40.0 bits (92), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 16/120 (13%)
Query: 33 RVKKLRSIVTALLKYERIEVYHYDGDEARDTHKETMDMADFW-----------IEEKNIV 81
R +R++VT+LL++E+I E R + + I+++ +V
Sbjct: 17 RAAMMRNMVTSLLEHEKITTTDARAKELRKVVDRMITLGKRGDLHARRQAIKVIQDRKVV 76
Query: 82 HKLFKVLVPRFQNTTVSYTRAYNAPIPHATPEKSDLSFHSVIELRGNPFPPLVQRAVDSR 141
KLF+++ PR+ + YTR I D + +IEL F P V++A D +
Sbjct: 77 GKLFELIAPRYTDRPGGYTR-----IIKLGNRLGDNAPQVIIELVEEEFTPRVRKAADDK 131
>sp|Q39XX8|RL17_GEOMG 50S ribosomal protein L17 OS=Geobacter metallireducens (strain
GS-15 / ATCC 53774 / DSM 7210) GN=rplQ PE=3 SV=1
Length = 178
Score = 40.0 bits (92), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 16/104 (15%)
Query: 33 RVKKLRSIVTALLKYERIEVYHYDGDEARDTHKETMDM-----------ADFWIEEKNIV 81
R+ R++VT+ L++ERI E R ++ + + A +I +K +V
Sbjct: 17 RIAMFRNMVTSFLEHERITTTDAKAKELRSIAEKMITLGKRGDLHAQRQAASYIRDKKVV 76
Query: 82 HKLFKVLVPRFQNTTVSYTRAYNAPIPHATPEKSDLSFHSVIEL 125
KLF + PR++ YTR I D + SVIEL
Sbjct: 77 TKLFSTIAPRYKERDGGYTRIIKLGI-----RPGDNAPLSVIEL 115
>sp|Q890R1|RL17_CLOTE 50S ribosomal protein L17 OS=Clostridium tetani (strain
Massachusetts / E88) GN=rplQ PE=3 SV=1
Length = 113
Score = 39.7 bits (91), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 53/119 (44%), Gaps = 18/119 (15%)
Query: 18 LAKHRRLRNPEGPQGRVKKLRSIVTALLKYERIEVYHYDGDEARDTHKETMDM------- 70
+A HR+L P R+ LR+ VT+LLK +IE E R ++ + +
Sbjct: 1 MAGHRKLGRP--TDQRMAMLRNQVTSLLKSGKIETTVTRAKETRSLAEKMITLGKRGDLQ 58
Query: 71 ----ADFWIEEKNIVHKLFKVLVPRFQNTTVSYTRAYNAPIPHATPEKSDLSFHSVIEL 125
A ++ E+ +V +LF + P++ YTR Y P + D + ++EL
Sbjct: 59 ARRQALSFVTEEEVVKRLFDDIAPKYAERNGGYTRMYKVG-----PRRGDGAEIVILEL 112
>sp|Q3A9U5|RL17_CARHZ 50S ribosomal protein L17 OS=Carboxydothermus hydrogenoformans
(strain Z-2901 / DSM 6008) GN=rplQ PE=3 SV=1
Length = 112
Score = 39.3 bits (90), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 16/100 (16%)
Query: 37 LRSIVTALLKYERIEVYHYDGDEARDTHKETMDMAD-----------FWIEEKNIVHKLF 85
LR++VT+LLK +I G A+ ++ + +A ++ E+N+V KLF
Sbjct: 17 LRNLVTSLLKEGKIITTEARGKSAKAVAEKLITLAKNDTLHNRRQALAYLYEENVVRKLF 76
Query: 86 KVLVPRFQNTTVSYTRAYNAPIPHATPEKSDLSFHSVIEL 125
K + P++ + YTR I P + D + ++EL
Sbjct: 77 KEIGPKYADRPGGYTR-----IVKIGPRRGDGAMMVLVEL 111
>sp|A8MLH0|RL17_ALKOO 50S ribosomal protein L17 OS=Alkaliphilus oremlandii (strain
OhILAs) GN=rplQ PE=3 SV=1
Length = 113
Score = 38.9 bits (89), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 16/100 (16%)
Query: 37 LRSIVTALLKYERIEVYHYDGDEARDTHKETMDMA---DF--------WIEEKNIVHKLF 85
LR++VT+LLK RIE E R ++ + +A D ++ E+ +V LF
Sbjct: 18 LRNLVTSLLKNGRIETTDTRAKETRRLAEKMITLAKRGDLHARRQVLSFVTEETVVKNLF 77
Query: 86 KVLVPRFQNTTVSYTRAYNAPIPHATPEKSDLSFHSVIEL 125
+ P++Q YTR I P + D + +IEL
Sbjct: 78 DEIAPKYQERNGGYTR-----IMKLGPRRGDAAEMVIIEL 112
>sp|C4XLK4|RL17_DESMR 50S ribosomal protein L17 OS=Desulfovibrio magneticus (strain ATCC
700980 / DSM 13731 / RS-1) GN=rplQ PE=3 SV=1
Length = 138
Score = 38.9 bits (89), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 43/100 (43%), Gaps = 15/100 (15%)
Query: 37 LRSIVTALLKYERIEVYHYDGDEARDTHKETMDMADF-----------WIEEKNIVHKLF 85
LR++ +LL +ERI + E R ++ + +A +E +V +LF
Sbjct: 21 LRNMARSLLIHERIRTTEHKAKELRGVVEQLVTLAQTDSVHARRMAYKVLENHQLVARLF 80
Query: 86 KVLVPRFQNTTVSYTRAYNAPIPHATPEKSDLSFHSVIEL 125
+ PRF YTR +P A D + ++IEL
Sbjct: 81 NEIGPRFTGQPGGYTRVVKMSLPRA----GDCAAMAIIEL 116
>sp|A5N4S6|RL17_CLOK5 50S ribosomal protein L17 OS=Clostridium kluyveri (strain ATCC 8527
/ DSM 555 / NCIMB 10680) GN=rplQ PE=3 SV=1
Length = 113
Score = 38.9 bits (89), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 54/119 (45%), Gaps = 18/119 (15%)
Query: 18 LAKHRRLRNPEGPQGRVKKLRSIVTALLKYERIEVYHYDGDEARDTHKETMDMAD----- 72
+A+HR+L P R LR++VT+ LK+ +I+ EAR ++ + +A
Sbjct: 1 MAQHRKLGLP--SDHRRAMLRNLVTSFLKHGKIQTTVTRAKEARSLAEKMITLAKRGDLH 58
Query: 73 ------FWIEEKNIVHKLFKVLVPRFQNTTVSYTRAYNAPIPHATPEKSDLSFHSVIEL 125
++ E+ +V LF + P++ YTR Y P + D + ++EL
Sbjct: 59 ARRQVLSFVTEEEVVKNLFTNIAPKYAERNGGYTRMYKIG-----PRRGDGAELVILEL 112
>sp|B9DYD8|RL17_CLOK1 50S ribosomal protein L17 OS=Clostridium kluyveri (strain NBRC
12016) GN=rplQ PE=3 SV=1
Length = 113
Score = 38.9 bits (89), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 54/119 (45%), Gaps = 18/119 (15%)
Query: 18 LAKHRRLRNPEGPQGRVKKLRSIVTALLKYERIEVYHYDGDEARDTHKETMDMAD----- 72
+A+HR+L P R LR++VT+ LK+ +I+ EAR ++ + +A
Sbjct: 1 MAQHRKLGLP--SDHRRAMLRNLVTSFLKHGKIQTTVTRAKEARSLAEKMITLAKRGDLH 58
Query: 73 ------FWIEEKNIVHKLFKVLVPRFQNTTVSYTRAYNAPIPHATPEKSDLSFHSVIEL 125
++ E+ +V LF + P++ YTR Y P + D + ++EL
Sbjct: 59 ARRQVLSFVTEEEVVKNLFTNIAPKYAERNGGYTRMYKIG-----PRRGDGAELVILEL 112
>sp|A5GAU7|RL17_GEOUR 50S ribosomal protein L17 OS=Geobacter uraniireducens (strain Rf4)
GN=rplQ PE=3 SV=1
Length = 184
Score = 38.5 bits (88), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 43/106 (40%), Gaps = 20/106 (18%)
Query: 33 RVKKLRSIVTALLKYERIEVYHYDGDEAR-------------DTHKETMDMADFWIEEKN 79
R+ R++VT+ L +ERI E R D H M A +I +K
Sbjct: 17 RIAMYRNMVTSFLNHERITTTDVKAKELRSIAEKMITLGKKGDLH--AMRQAASYIRDKK 74
Query: 80 IVHKLFKVLVPRFQNTTVSYTRAYNAPIPHATPEKSDLSFHSVIEL 125
+V KLF + PR+ YTR I D + SVIEL
Sbjct: 75 VVTKLFTAIAPRYAERAGGYTRIIKLGI-----RPGDNAPLSVIEL 115
>sp|Q250K3|RL17_DESHY 50S ribosomal protein L17 OS=Desulfitobacterium hafniense (strain
Y51) GN=rplQ PE=3 SV=1
Length = 112
Score = 38.5 bits (88), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 55/116 (47%), Gaps = 18/116 (15%)
Query: 21 HRRLRNPEGPQGRVKKLRSIVTALLKYERIEVYHYDGDEARDTHKETMDM---------- 70
+R+L G +G + LR++ T+LLK+ERI+ E ++ + +
Sbjct: 3 YRKLGRNTGHRGSM--LRNLATSLLKHERIQTTEARAKEVNAIAEKMITLGKQGDLAARR 60
Query: 71 -ADFWIEEKNIVHKLFKVLVPRFQNTTVSYTRAYNAPIPHATPEKSDLSFHSVIEL 125
A ++ E+++V KLF + P++ + YTR + P + D + +IEL
Sbjct: 61 NALTYLLEEDVVTKLFTEIAPKYADRQGGYTR-----VIKVGPRRGDAAEMVLIEL 111
>sp|B8G1Z5|RL17_DESHD 50S ribosomal protein L17 OS=Desulfitobacterium hafniense (strain
DCB-2 / DSM 10664) GN=rplQ PE=3 SV=1
Length = 112
Score = 38.5 bits (88), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 55/116 (47%), Gaps = 18/116 (15%)
Query: 21 HRRLRNPEGPQGRVKKLRSIVTALLKYERIEVYHYDGDEARDTHKETMDM---------- 70
+R+L G +G + LR++ T+LLK+ERI+ E ++ + +
Sbjct: 3 YRKLGRNTGHRGSM--LRNLATSLLKHERIQTTEARAKEVNAIAEKMITLGKQGDLAARR 60
Query: 71 -ADFWIEEKNIVHKLFKVLVPRFQNTTVSYTRAYNAPIPHATPEKSDLSFHSVIEL 125
A ++ E+++V KLF + P++ + YTR + P + D + +IEL
Sbjct: 61 NALTYLLEEDVVTKLFTEIAPKYADRQGGYTR-----VIKVGPRRGDAAEMVLIEL 111
>sp|A0PXX6|RL17_CLONN 50S ribosomal protein L17 OS=Clostridium novyi (strain NT) GN=rplQ
PE=3 SV=1
Length = 113
Score = 38.1 bits (87), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 54/119 (45%), Gaps = 18/119 (15%)
Query: 18 LAKHRRLRNPEGPQGRVKKLRSIVTALLKYERIEVYHYDGDEARDTHKETMDMAD----- 72
+A+ R+L P R LR++VT+ LK ++E EAR+ ++ + +A
Sbjct: 1 MAQQRKLGLP--TDHRRAMLRNLVTSFLKNGKVETTITRAKEARNMAEKMITLAKRGDLH 58
Query: 73 ------FWIEEKNIVHKLFKVLVPRFQNTTVSYTRAYNAPIPHATPEKSDLSFHSVIEL 125
++ EK +V LF + P++ + YTR Y P + D + ++EL
Sbjct: 59 ARRQVLAYVTEKEVVDHLFAEIAPKYADRNGGYTRMYKMG-----PRRGDGAEVVILEL 112
>sp|A5D5F0|RL17_PELTS 50S ribosomal protein L17 OS=Pelotomaculum thermopropionicum
(strain DSM 13744 / JCM 10971 / SI) GN=rplQ PE=3 SV=1
Length = 112
Score = 38.1 bits (87), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 16/100 (16%)
Query: 37 LRSIVTALLKYERIEVYHYDGDEARD------THKETMDMAD-----FWIEEKNIVHKLF 85
LR++VTAL + ERI E R T + D+A +I E+++V KLF
Sbjct: 17 LRNLVTALFRDERINTTEARAREVRSIAEKLVTDAKQGDLAARRRALAYIYEEDVVRKLF 76
Query: 86 KVLVPRFQNTTVSYTRAYNAPIPHATPEKSDLSFHSVIEL 125
+ P++ YTR I A + D + ++EL
Sbjct: 77 DNIAPKYAGRQGGYTR-----IVKAGCRRGDAAGMVILEL 111
>sp|Q0SQH4|RL17_CLOPS 50S ribosomal protein L17 OS=Clostridium perfringens (strain SM101
/ Type A) GN=rplQ PE=3 SV=1
Length = 113
Score = 38.1 bits (87), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 52/119 (43%), Gaps = 18/119 (15%)
Query: 18 LAKHRRLRNPEGPQGRVKKLRSIVTALLKYERIEVYHYDGDEARDTHKETMDMAD----- 72
+A +R+L P R LR++VT+ LK+ +IE E R ++ + +A
Sbjct: 1 MAGYRKLGRP--TDQRKAMLRNLVTSFLKHGKIETTETRAKETRSLAEKMITLAKRGDLH 58
Query: 73 ------FWIEEKNIVHKLFKVLVPRFQNTTVSYTRAYNAPIPHATPEKSDLSFHSVIEL 125
++ E+ +V LF + P++ YTR Y P + D + ++EL
Sbjct: 59 ARRQVLAFVTEEEVVKNLFDNIAPKYAERNGGYTRMYKVG-----PRRGDGAEVVILEL 112
>sp|Q8XHV1|RL17_CLOPE 50S ribosomal protein L17 OS=Clostridium perfringens (strain 13 /
Type A) GN=rplQ PE=3 SV=1
Length = 113
Score = 38.1 bits (87), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 52/119 (43%), Gaps = 18/119 (15%)
Query: 18 LAKHRRLRNPEGPQGRVKKLRSIVTALLKYERIEVYHYDGDEARDTHKETMDMAD----- 72
+A +R+L P R LR++VT+ LK+ +IE E R ++ + +A
Sbjct: 1 MAGYRKLGRP--TDQRKAMLRNLVTSFLKHGKIETTETRAKETRSLAEKMITLAKRGDLH 58
Query: 73 ------FWIEEKNIVHKLFKVLVPRFQNTTVSYTRAYNAPIPHATPEKSDLSFHSVIEL 125
++ E+ +V LF + P++ YTR Y P + D + ++EL
Sbjct: 59 ARRQVLAFVTEEEVVKNLFDNIAPKYAERNGGYTRMYKVG-----PRRGDGAEVVILEL 112
>sp|Q0TMS6|RL17_CLOP1 50S ribosomal protein L17 OS=Clostridium perfringens (strain ATCC
13124 / NCTC 8237 / Type A) GN=rplQ PE=3 SV=1
Length = 113
Score = 38.1 bits (87), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 52/119 (43%), Gaps = 18/119 (15%)
Query: 18 LAKHRRLRNPEGPQGRVKKLRSIVTALLKYERIEVYHYDGDEARDTHKETMDMAD----- 72
+A +R+L P R LR++VT+ LK+ +IE E R ++ + +A
Sbjct: 1 MAGYRKLGRP--TDQRKAMLRNLVTSFLKHGKIETTETRAKETRSLAEKMITLAKRGDLH 58
Query: 73 ------FWIEEKNIVHKLFKVLVPRFQNTTVSYTRAYNAPIPHATPEKSDLSFHSVIEL 125
++ E+ +V LF + P++ YTR Y P + D + ++EL
Sbjct: 59 ARRQVLAFVTEEEVVKNLFDNIAPKYAERNGGYTRMYKVG-----PRRGDGAEVVILEL 112
>sp|A6TWF2|RL17_ALKMQ 50S ribosomal protein L17 OS=Alkaliphilus metalliredigens (strain
QYMF) GN=rplQ PE=3 SV=1
Length = 113
Score = 38.1 bits (87), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 16/100 (16%)
Query: 37 LRSIVTALLKYERIEVYHYDGDEARDTHKETMDMAD-----------FWIEEKNIVHKLF 85
LR++VT+L K RI+ E R ++ + +A ++ E+ +V LF
Sbjct: 18 LRNLVTSLFKSGRIQTTEPKAKETRRAAEKMITLAKRGDLHARRQALAYMTEETVVTNLF 77
Query: 86 KVLVPRFQNTTVSYTRAYNAPIPHATPEKSDLSFHSVIEL 125
+ + P++Q+ YTR I P + D + ++EL
Sbjct: 78 EEIAPKYQDRNGGYTR-----IMKLGPRQGDAAEVCILEL 112
>sp|C6C1B2|RL17_DESAD 50S ribosomal protein L17 OS=Desulfovibrio salexigens (strain ATCC
14822 / DSM 2638 / NCIB 8403 / VKM B-1763) GN=rplQ PE=3
SV=1
Length = 141
Score = 37.7 bits (86), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 15/100 (15%)
Query: 37 LRSIVTALLKYERIEVYHYDGDEARDTHKETMDMA---DF--------WIEEKNIVHKLF 85
LR++V +LL YE I E R + ++ + +A D +E +V +LF
Sbjct: 21 LRNMVRSLLTYEHIRTTEPKAKELRSSCEKLITLALRNDLHSRRLAYKTLENHGLVKRLF 80
Query: 86 KVLVPRFQNTTVSYTRAYNAPIPHATPEKSDLSFHSVIEL 125
+ PR++ YTR I A P K D + +IEL
Sbjct: 81 DEIGPRYEGGGGGYTRI----IKLAEPRKGDCAPMCIIEL 116
>sp|Q8YPK4|RL17_NOSS1 50S ribosomal protein L17 OS=Nostoc sp. (strain PCC 7120 / UTEX
2576) GN=rplQ PE=3 SV=1
Length = 116
Score = 37.7 bits (86), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 16/100 (16%)
Query: 37 LRSIVTALLKYERI-------EVYHYDGDE----ARDTHKETMDMADFWIEEKNIVHKLF 85
LR++ T L+++ RI +V + D+ A+D A +I +K +VH LF
Sbjct: 21 LRALTTELIRHGRITTTLVRAKVVRSEVDKIITLAKDGSLAARRRALGYIYDKQLVHALF 80
Query: 86 KVLVPRFQNTTVSYTRAYNAPIPHATPEKSDLSFHSVIEL 125
+ + R+ N YTR I H P + D + ++IEL
Sbjct: 81 EQVSSRYGNRQGGYTR-----ILHTVPRRGDNAEMAIIEL 115
>sp|Q3MF96|RL17_ANAVT 50S ribosomal protein L17 OS=Anabaena variabilis (strain ATCC 29413
/ PCC 7937) GN=rplQ PE=3 SV=1
Length = 116
Score = 37.7 bits (86), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 16/100 (16%)
Query: 37 LRSIVTALLKYERI-------EVYHYDGDE----ARDTHKETMDMADFWIEEKNIVHKLF 85
LR++ T L+++ RI +V + D+ A+D A +I +K +VH LF
Sbjct: 21 LRALTTELIRHGRITTTLVRAKVVRSEVDKIITLAKDGSLAARRRALGYIYDKQLVHALF 80
Query: 86 KVLVPRFQNTTVSYTRAYNAPIPHATPEKSDLSFHSVIEL 125
+ + R+ N YTR I H P + D + ++IEL
Sbjct: 81 EQVSSRYGNRQGGYTR-----ILHTVPRRGDNAEMAIIEL 115
>sp|A6LPU1|RL17_CLOB8 50S ribosomal protein L17 OS=Clostridium beijerinckii (strain ATCC
51743 / NCIMB 8052) GN=rplQ PE=3 SV=1
Length = 113
Score = 37.7 bits (86), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 53/119 (44%), Gaps = 18/119 (15%)
Query: 18 LAKHRRLRNPEGPQGRVKKLRSIVTALLKYERIEVYHYDGDEARDTHKETMDMAD----- 72
+A HR+L P R LR++VT+LLK+ +IE E R ++ + +
Sbjct: 1 MAGHRKLGLP--TDQRRAMLRNLVTSLLKHGKIETTETRAKETRSIAEKMITLGKRGDLH 58
Query: 73 ------FWIEEKNIVHKLFKVLVPRFQNTTVSYTRAYNAPIPHATPEKSDLSFHSVIEL 125
+++E+ +V LF + P++ YTR I P + D + ++EL
Sbjct: 59 ARRQVLSYVQEELVVKNLFDNVAPKYTERNGGYTR-----IIKKGPRRGDGAEIVILEL 112
>sp|B0K5S2|RL17_THEPX 50S ribosomal protein L17 OS=Thermoanaerobacter sp. (strain X514)
GN=rplQ PE=3 SV=1
Length = 112
Score = 37.4 bits (85), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 16/100 (16%)
Query: 37 LRSIVTALLKYERIEVYHYDGDEARDTHKETMDM-----------ADFWIEEKNIVHKLF 85
LR++VT LKY RI E R ++ + + A +I ++++V KLF
Sbjct: 17 LRNLVTDFLKYGRITTTEARAKEVRSISEKMITLGKRGDLHARRQALAYILDESVVKKLF 76
Query: 86 KVLVPRFQNTTVSYTRAYNAPIPHATPEKSDLSFHSVIEL 125
+ P++++ YTR I P + D + +IEL
Sbjct: 77 DEIAPKYKDRQGGYTR-----ILKLGPRRGDGAPLVIIEL 111
>sp|B0KCM9|RL17_THEP3 50S ribosomal protein L17 OS=Thermoanaerobacter pseudethanolicus
(strain ATCC 33223 / 39E) GN=rplQ PE=3 SV=1
Length = 112
Score = 37.4 bits (85), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 16/100 (16%)
Query: 37 LRSIVTALLKYERIEVYHYDGDEARDTHKETMDM-----------ADFWIEEKNIVHKLF 85
LR++VT LKY RI E R ++ + + A +I ++++V KLF
Sbjct: 17 LRNLVTDFLKYGRITTTEARAKEVRSISEKMITLGKRGDLHARRQALAYILDESVVKKLF 76
Query: 86 KVLVPRFQNTTVSYTRAYNAPIPHATPEKSDLSFHSVIEL 125
+ P++++ YTR I P + D + +IEL
Sbjct: 77 DEIAPKYKDRQGGYTR-----ILKLGPRRGDGAPLVIIEL 111
>sp|A4XBL7|RL17_SALTO 50S ribosomal protein L17 OS=Salinispora tropica (strain ATCC
BAA-916 / DSM 44818 / CNB-440) GN=rplQ PE=3 SV=1
Length = 190
Score = 37.4 bits (85), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
Query: 75 IEEKNIVHKLFKVLVPRFQNTTVSYTRAYNAPIPHATPEKSDLSFHSVIEL 125
+++K++V+ LF+ + PR+ N YTR I P K D + ++IEL
Sbjct: 70 VKDKDVVYTLFEQIAPRYANRNGGYTR-----IVKTGPRKGDAAPMAIIEL 115
>sp|Q67JX2|RL17_SYMTH 50S ribosomal protein L17 OS=Symbiobacterium thermophilum (strain T
/ IAM 14863) GN=rplQ PE=3 SV=1
Length = 113
Score = 37.4 bits (85), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 52/119 (43%), Gaps = 18/119 (15%)
Query: 18 LAKHRRLRNPEGPQGRVKKLRSIVTALLKYERIEVYHYDGDEARDTHKETMDMAD----- 72
+AK+++L R R++VTAL ERIE + +E + +A
Sbjct: 1 MAKYQKL--GRDSSARKALFRAVVTALFDKERIETTEAKAKAVQSIAEEMITLAKRGDLH 58
Query: 73 ------FWIEEKNIVHKLFKVLVPRFQNTTVSYTRAYNAPIPHATPEKSDLSFHSVIEL 125
+I ++++V KLF + PR+ + YTR + K D + +++EL
Sbjct: 59 ARRQALAYIYDESVVTKLFNQIAPRYADRNGGYTRVIRTGV-----RKGDAAPMAILEL 112
>sp|A8M4Z9|RL17_SALAI 50S ribosomal protein L17 OS=Salinispora arenicola (strain CNS-205)
GN=rplQ PE=3 SV=1
Length = 190
Score = 37.0 bits (84), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Query: 75 IEEKNIVHKLFKVLVPRFQNTTVSYTRAYNAPIPHATPEKSDLSFHSVIEL 125
+++K++V+ LF + PR+ N YTR I P K D + ++IEL
Sbjct: 70 VKDKDVVYTLFDQIAPRYANRNGGYTR-----IVKTGPRKGDAAPMAIIEL 115
>sp|C5C0G0|RL17_BEUC1 50S ribosomal protein L17 OS=Beutenbergia cavernae (strain ATCC
BAA-8 / DSM 12333 / NBRC 16432) GN=rplQ PE=3 SV=1
Length = 197
Score = 37.0 bits (84), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 50/129 (38%), Gaps = 18/129 (13%)
Query: 15 IPILAKHRRLRNPEGPQGRVKKLRSIVTALLKYERIEVYHYDGDEARD------THKETM 68
+P K RL GP L ++ TAL ++ERI R T +
Sbjct: 1 MPTPTKGPRLGG--GPAHERLMLANLATALFEHERITTTEAKAKRLRPLAERLITFAKRG 58
Query: 69 DMAD-----FWIEEKNIVHKLFKVLVPRFQNTTVSYTRAYNAPIPHATPEKSDLSFHSVI 123
D+A +++K +VH LF + P YTR I P K D + +VI
Sbjct: 59 DLASRRRVLTVVKDKGVVHTLFTEIAPAMAERPGGYTR-----ITKVGPRKGDNAPMAVI 113
Query: 124 ELRGNPFPP 132
EL P P
Sbjct: 114 ELVLEPLSP 122
>sp|A4XLQ1|RL17_CALS8 50S ribosomal protein L17 OS=Caldicellulosiruptor saccharolyticus
(strain ATCC 43494 / DSM 8903) GN=rplQ PE=3 SV=1
Length = 113
Score = 37.0 bits (84), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 16/100 (16%)
Query: 37 LRSIVTALLKYERIEVYHYDGDEARDTHKETM------DMADF-----WIEEKNIVHKLF 85
+R++ T+L K+ RI + R ++ + D+A + ++ E+++ + LF
Sbjct: 18 MRNLATSLFKHGRIMTTEAKAKDLRRVAEKLITIAKKGDLASYRRVLGYLYEEDVAYDLF 77
Query: 86 KVLVPRFQNTTVSYTRAYNAPIPHATPEKSDLSFHSVIEL 125
+ + PR+Q YTR I P K D + IEL
Sbjct: 78 QKIAPRYQGRNGGYTR-----IIKVGPRKGDGAMMVYIEL 112
>sp|B2TIK5|RL17_CLOBB 50S ribosomal protein L17 OS=Clostridium botulinum (strain Eklund
17B / Type B) GN=rplQ PE=3 SV=1
Length = 113
Score = 37.0 bits (84), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 18/119 (15%)
Query: 18 LAKHRRLRNPEGPQGRVKKLRSIVTALLKYERIEVYHYDGDEARDTHKETMDM------- 70
+A +R+L P R LR++VT+LLK+ +IE E R ++ + +
Sbjct: 1 MAGYRKLGLP--TDQRRAMLRNLVTSLLKHGKIETTVTRAKETRSIAEKMITLGKRGDLH 58
Query: 71 ----ADFWIEEKNIVHKLFKVLVPRFQNTTVSYTRAYNAPIPHATPEKSDLSFHSVIEL 125
A +I+E+ +V LF + P++ YTR Y P + D + ++EL
Sbjct: 59 ARRQALAFIQEELVVKNLFDNVAPKYAERNGGYTRMYKKG-----PRRGDGAEVVILEL 112
>sp|B2UYE0|RL17_CLOBA 50S ribosomal protein L17 OS=Clostridium botulinum (strain Alaska
E43 / Type E3) GN=rplQ PE=3 SV=1
Length = 113
Score = 37.0 bits (84), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 18/119 (15%)
Query: 18 LAKHRRLRNPEGPQGRVKKLRSIVTALLKYERIEVYHYDGDEARDTHKETMDM------- 70
+A +R+L P R LR++VT+LLK+ +IE E R ++ + +
Sbjct: 1 MAGYRKLGLP--TDQRRAMLRNLVTSLLKHGKIETTVTRAKETRSIAEKMITLGKRGDLH 58
Query: 71 ----ADFWIEEKNIVHKLFKVLVPRFQNTTVSYTRAYNAPIPHATPEKSDLSFHSVIEL 125
A +I+E+ +V LF + P++ YTR Y P + D + ++EL
Sbjct: 59 ARRQALAFIQEELVVKNLFDNVAPKYAERNGGYTRMYKKG-----PRRGDGAEVVILEL 112
>sp|Q18CI8|RL17_CLOD6 50S ribosomal protein L17 OS=Clostridium difficile (strain 630)
GN=rplQ PE=3 SV=1
Length = 113
Score = 37.0 bits (84), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 53/119 (44%), Gaps = 18/119 (15%)
Query: 18 LAKHRRLRNPEGPQGRVKKLRSIVTALLKYERIEVYHYDGDEARDTHKETMDMAD----- 72
+AK+R+L + + LR++VT LL+ RIE E R ++ + +A
Sbjct: 1 MAKYRKLGRETAHRNLM--LRNLVTCLLRSGRIETTVTRAKETRRMAEKMITLAKRGDLH 58
Query: 73 ------FWIEEKNIVHKLFKVLVPRFQNTTVSYTRAYNAPIPHATPEKSDLSFHSVIEL 125
++ ++ +V+ LF L P++ YTR I P K D + + IEL
Sbjct: 59 ARRQVLAYVMDETVVNNLFTDLAPKYAERNGGYTR-----IIKIGPRKGDAAEMAFIEL 112
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.130 0.366
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,434,365
Number of Sequences: 539616
Number of extensions: 2789468
Number of successful extensions: 7993
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 118
Number of HSP's that attempted gapping in prelim test: 7926
Number of HSP's gapped (non-prelim): 139
length of query: 191
length of database: 191,569,459
effective HSP length: 111
effective length of query: 80
effective length of database: 131,672,083
effective search space: 10533766640
effective search space used: 10533766640
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)