BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14604
(209 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O97159|CHDM_DROME Chromodomain-helicase-DNA-binding protein Mi-2 homolog
OS=Drosophila melanogaster GN=Mi-2 PE=1 SV=2
Length = 1982
Score = 244 bits (624), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 104/136 (76%), Positives = 123/136 (90%)
Query: 74 RRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMG 133
+ YTPPPEKPTTDL+KKYE QP FL+ TGMQLH YQ+EGINWLRYSWGQ IDTILADEMG
Sbjct: 699 KHYTPPPEKPTTDLKKKYEDQPAFLEGTGMQLHPYQIEGINWLRYSWGQGIDTILADEMG 758
Query: 134 LGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRI 193
LGKTIQT+TFLYSL+KEGHC+GPFLV+ PLST++NWEREFE WAPDFY +TY+GDKD R
Sbjct: 759 LGKTIQTVTFLYSLYKEGHCRGPFLVAVPLSTLVNWEREFELWAPDFYCITYIGDKDSRA 818
Query: 194 VLRDHDISWEDTANRG 209
V+R++++S+E+ A RG
Sbjct: 819 VIRENELSFEEGAIRG 834
>sp|Q6PDQ2|CHD4_MOUSE Chromodomain-helicase-DNA-binding protein 4 OS=Mus musculus GN=Chd4
PE=1 SV=1
Length = 1915
Score = 212 bits (540), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 95/131 (72%), Positives = 108/131 (82%)
Query: 79 PPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTI 138
PPE PT D KYE+QP +LD TG LH YQ+EG+NWLR+SW Q DTILADEMGLGKT+
Sbjct: 693 PPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTV 752
Query: 139 QTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDH 198
QT FLYSL+KEGH KGPFLVSAPLSTIINWEREFE WAPD YVVTYVGDKD R ++R++
Sbjct: 753 QTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIREN 812
Query: 199 DISWEDTANRG 209
+ S+ED A RG
Sbjct: 813 EFSFEDNAIRG 823
>sp|Q14839|CHD4_HUMAN Chromodomain-helicase-DNA-binding protein 4 OS=Homo sapiens GN=CHD4
PE=1 SV=2
Length = 1912
Score = 212 bits (540), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 95/131 (72%), Positives = 108/131 (82%)
Query: 79 PPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTI 138
PPE PT D KYE+QP +LD TG LH YQ+EG+NWLR+SW Q DTILADEMGLGKT+
Sbjct: 700 PPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTV 759
Query: 139 QTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDH 198
QT FLYSL+KEGH KGPFLVSAPLSTIINWEREFE WAPD YVVTYVGDKD R ++R++
Sbjct: 760 QTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDMYVVTYVGDKDSRAIIREN 819
Query: 199 DISWEDTANRG 209
+ S+ED A RG
Sbjct: 820 EFSFEDNAIRG 830
>sp|Q12873|CHD3_HUMAN Chromodomain-helicase-DNA-binding protein 3 OS=Homo sapiens GN=CHD3
PE=1 SV=3
Length = 2000
Score = 206 bits (523), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 93/131 (70%), Positives = 105/131 (80%)
Query: 79 PPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTI 138
PP PT D KYE QP F+ TG LH YQLEG+NWLR+SW Q DTILADEMGLGKTI
Sbjct: 710 PPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTI 769
Query: 139 QTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDH 198
QTI FLYSL+KEGH KGPFLVSAPLSTIINWEREF+ WAP FYVVTY GDKD R ++R++
Sbjct: 770 QTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIREN 829
Query: 199 DISWEDTANRG 209
+ S+ED A +G
Sbjct: 830 EFSFEDNAIKG 840
>sp|Q8TDI0|CHD5_HUMAN Chromodomain-helicase-DNA-binding protein 5 OS=Homo sapiens GN=CHD5
PE=2 SV=1
Length = 1954
Score = 202 bits (515), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 91/130 (70%), Positives = 107/130 (82%)
Query: 79 PPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTI 138
PP+ P D K++KQP ++D TG LH YQLEG+NWLR+SW Q DTILADEMGLGKT+
Sbjct: 674 PPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTV 733
Query: 139 QTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDH 198
QTI FLYSL+KEGH KGP+LVSAPLSTIINWEREFE WAPDFYVVTY GDK+ R V+R++
Sbjct: 734 QTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIREN 793
Query: 199 DISWEDTANR 208
+ S+ED A R
Sbjct: 794 EFSFEDNAIR 803
>sp|O16102|CHD3_DROME Chromodomain-helicase-DNA-binding protein 3 OS=Drosophila
melanogaster GN=Chd3 PE=2 SV=3
Length = 892
Score = 199 bits (506), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 85/126 (67%), Positives = 102/126 (80%)
Query: 83 PTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTIT 142
PT DL KKYE QP FL + G++LH +Q+EG++WLRYSWGQ I TILADEMGLGKTIQT+
Sbjct: 245 PTIDLNKKYEDQPVFLKEAGLKLHPFQIEGVSWLRYSWGQGIPTILADEMGLGKTIQTVV 304
Query: 143 FLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISW 202
FLYSLFKEGHC+GPFL+S PLST+ NWERE E WAP+ Y VTYVG K R V+R H+IS+
Sbjct: 305 FLYSLFKEGHCRGPFLISVPLSTLTNWERELELWAPELYCVTYVGGKTARAVIRKHEISF 364
Query: 203 EDTANR 208
E+ +
Sbjct: 365 EEVTTK 370
>sp|G5EBZ4|LE418_CAEEL Protein let-418 OS=Caenorhabditis elegans GN=let-418 PE=1 SV=1
Length = 1829
Score = 195 bits (495), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 84/125 (67%), Positives = 102/125 (81%)
Query: 85 TDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFL 144
D+RKKYE QP ++ +TG +LH YQLEG+NWLR+ W D ILADEMGLGKT+Q++TFL
Sbjct: 582 IDIRKKYEVQPDYVTETGGKLHPYQLEGLNWLRHCWSNGTDAILADEMGLGKTVQSLTFL 641
Query: 145 YSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWED 204
YSL KEGHCKGPFL++APLSTIINWERE E W PDFYVVTYVG +D R+VLR+H+ S+ +
Sbjct: 642 YSLMKEGHCKGPFLIAAPLSTIINWEREAEQWCPDFYVVTYVGLRDARVVLREHEFSFVE 701
Query: 205 TANRG 209
A R
Sbjct: 702 GAVRS 706
>sp|Q22516|CHD3_CAEEL Chromodomain-helicase-DNA-binding protein 3 homolog
OS=Caenorhabditis elegans GN=chd-3 PE=2 SV=2
Length = 1787
Score = 193 bits (491), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 84/125 (67%), Positives = 101/125 (80%)
Query: 85 TDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFL 144
D+ KKYE QP F+ +TG LH YQLEGINWLR+ W D ILADEMGLGKT+Q++TFL
Sbjct: 596 IDILKKYEVQPDFISETGGNLHPYQLEGINWLRHCWSNGTDAILADEMGLGKTVQSLTFL 655
Query: 145 YSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWED 204
Y+L KEGH KGPFL++APLSTIINWERE E W PDFYVVTYVGD++ R+V+R+H+ S+ D
Sbjct: 656 YTLMKEGHTKGPFLIAAPLSTIINWEREAELWCPDFYVVTYVGDRESRMVIREHEFSFVD 715
Query: 205 TANRG 209
A RG
Sbjct: 716 GAVRG 720
>sp|O14647|CHD2_HUMAN Chromodomain-helicase-DNA-binding protein 2 OS=Homo sapiens GN=CHD2
PE=1 SV=2
Length = 1828
Score = 135 bits (340), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 58/107 (54%), Positives = 76/107 (71%)
Query: 93 KQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGH 152
KQP +L ++L YQLEG+NWL +SW +N ILADEMGLGKTIQTI+FL LF +
Sbjct: 472 KQPAYLGGENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQ 531
Query: 153 CKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHD 199
GPFL+ PLST+ +W+REFE WAP+ VV Y+GD R +R+++
Sbjct: 532 LYGPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYE 578
>sp|Q7KU24|CHD1_DROME Chromodomain-helicase-DNA-binding protein 1 OS=Drosophila
melanogaster GN=Chd1 PE=1 SV=1
Length = 1883
Score = 135 bits (339), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 61/116 (52%), Positives = 81/116 (69%), Gaps = 1/116 (0%)
Query: 90 KYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFK 149
+ + QP FL +G+ L YQ++G+NWL +SW + ILADEMGLGKTIQTI FLYSLFK
Sbjct: 514 RIKNQPEFLS-SGLTLRDYQMDGLNWLLHSWCKENSVILADEMGLGKTIQTICFLYSLFK 572
Query: 150 EGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDT 205
H GPFL PLST+ W+REF+ WAPD VVTY+GD R +++ ++ +E +
Sbjct: 573 IHHLYGPFLCVVPLSTMTAWQREFDLWAPDMNVVTYLGDIKSRELIQQYEWQFESS 628
>sp|A9X4T1|CHD1_BOMMO Chromodomain-helicase-DNA-binding protein 1 OS=Bombyx mori GN=CHD1
PE=1 SV=1
Length = 1365
Score = 135 bits (339), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 66/139 (47%), Positives = 89/139 (64%), Gaps = 9/139 (6%)
Query: 68 ASGSKPRRYTPPPEKPTTDLRKKYEK---QPPFL-DDTGMQLHAYQLEGINWLRYSWGQN 123
A+ S P R+ P ++ R K+ + QP ++ D+ L YQ++G+NWL +SW ++
Sbjct: 169 AAKSTPSRHCPVLKR-----RPKFHQIKEQPEYVGKDSSYHLRDYQMDGLNWLIHSWCKD 223
Query: 124 IDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVV 183
ILADEMGLGKTIQTI FLY LFK H GPFL PLST+ W+REF+ WAPD VV
Sbjct: 224 NSVILADEMGLGKTIQTICFLYYLFKSQHLYGPFLCVVPLSTMTAWQREFQQWAPDINVV 283
Query: 184 TYVGDKDCRIVLRDHDISW 202
TY+GD R ++R + S+
Sbjct: 284 TYIGDVSSRDIIRQFEWSF 302
>sp|Q9S775|PKL_ARATH CHD3-type chromatin-remodeling factor PICKLE OS=Arabidopsis
thaliana GN=PKL PE=1 SV=1
Length = 1384
Score = 125 bits (313), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/112 (54%), Positives = 76/112 (67%), Gaps = 5/112 (4%)
Query: 89 KKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLF 148
++++ P FL G+ LH YQLEG+N+LR+SW + ILADEMGLGKTIQ+I L SLF
Sbjct: 260 QQFDHTPEFL--KGL-LHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIALLASLF 316
Query: 149 KEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDI 200
+E P LV APLST+ NWEREF TWAP VV Y G R V+R+H+
Sbjct: 317 EENLI--PHLVIAPLSTLRNWEREFATWAPQMNVVMYFGTAQARAVIREHEF 366
>sp|O14646|CHD1_HUMAN Chromodomain-helicase-DNA-binding protein 1 OS=Homo sapiens GN=CHD1
PE=1 SV=2
Length = 1710
Score = 123 bits (308), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 75/114 (65%), Gaps = 1/114 (0%)
Query: 93 KQPPFLD-DTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEG 151
KQP ++ G++L YQL G+NWL +SW + ILADEMGLGKTIQTI+FL LF E
Sbjct: 468 KQPSYIGGHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEH 527
Query: 152 HCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDT 205
GPFL+ PLST+ +W+RE +TWA V Y+GD + R ++R H+ + T
Sbjct: 528 QLYGPFLLVVPLSTLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWTHHQT 581
>sp|P40201|CHD1_MOUSE Chromodomain-helicase-DNA-binding protein 1 OS=Mus musculus GN=Chd1
PE=1 SV=3
Length = 1711
Score = 123 bits (308), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 73/108 (67%), Gaps = 1/108 (0%)
Query: 93 KQPPFLD-DTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEG 151
KQP ++ G++L YQL G+NWL +SW + ILADEMGLGKTIQTI+FL LF E
Sbjct: 466 KQPSYIGGHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEH 525
Query: 152 HCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHD 199
GPFL+ PLST+ +W+RE +TWA V Y+GD + R ++R H+
Sbjct: 526 QLYGPFLLVVPLSTLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHE 573
>sp|B6ZLK2|CHD1_CHICK Chromodomain-helicase-DNA-binding protein 1 OS=Gallus gallus
GN=CHD1 PE=1 SV=1
Length = 1719
Score = 123 bits (308), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 72/108 (66%), Gaps = 1/108 (0%)
Query: 93 KQPPFLD-DTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEG 151
KQP ++ ++L YQL G+NWL +SW + ILADEMGLGKTIQTI+FL LF E
Sbjct: 464 KQPSYIGGHESLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEH 523
Query: 152 HCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHD 199
GPFL+ PLST+ +W+RE +TWAP V Y+GD R ++R H+
Sbjct: 524 QLYGPFLLVVPLSTLTSWQREIQTWAPQMNAVVYLGDITSRNMIRTHE 571
>sp|Q8BYH8|CHD9_MOUSE Chromodomain-helicase-DNA-binding protein 9 OS=Mus musculus GN=Chd9
PE=1 SV=2
Length = 2885
Score = 122 bits (307), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/128 (47%), Positives = 84/128 (65%), Gaps = 4/128 (3%)
Query: 81 EKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQT 140
++P +++ KK E+ + G QL YQLEG+NWL ++W + ILADEMGLGKTIQ+
Sbjct: 837 DRPPSNIWKKIEQSREY--KNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQS 894
Query: 141 ITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDI 200
ITFLY + G +GPFL+ APLSTI NWEREF TW D VV Y G R +++ +++
Sbjct: 895 ITFLYEILLTG-IRGPFLIIAPLSTIANWEREFRTWT-DINVVVYHGSLISRQMIQQYEM 952
Query: 201 SWEDTANR 208
+ D+ R
Sbjct: 953 YFRDSQGR 960
>sp|Q3L8U1|CHD9_HUMAN Chromodomain-helicase-DNA-binding protein 9 OS=Homo sapiens GN=CHD9
PE=1 SV=2
Length = 2897
Score = 121 bits (304), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/159 (44%), Positives = 95/159 (59%), Gaps = 18/159 (11%)
Query: 60 ELQEDEDGA--------SGSKP--RRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQ 109
EL+ED D A S+P RR PP +++ KK ++ + G QL YQ
Sbjct: 811 ELKEDVDLAKIEEFEQLQASRPDTRRLDRPP----SNIWKKIDQSRDY--KNGNQLREYQ 864
Query: 110 LEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINW 169
LEG+NWL ++W + ILADEMGLGKTIQ+ITFLY + G +GPFL+ APLSTI NW
Sbjct: 865 LEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYEILLTG-IRGPFLIIAPLSTIANW 923
Query: 170 EREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANR 208
EREF TW D VV Y G R +++ +++ + D+ R
Sbjct: 924 EREFRTWT-DINVVVYHGSLISRQMIQQYEMYFRDSQGR 961
>sp|Q8TD26|CHD6_HUMAN Chromodomain-helicase-DNA-binding protein 6 OS=Homo sapiens GN=CHD6
PE=1 SV=4
Length = 2715
Score = 117 bits (292), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 66/152 (43%), Positives = 90/152 (59%), Gaps = 9/152 (5%)
Query: 58 TKELQEDEDGASGSKPRRYTPPPE-----KPTTDLRKKYEKQPPFLDDTGMQLHAYQLEG 112
T EL+ED D A + PE +P +D +K EK + + QL YQLEG
Sbjct: 411 TWELEEDVDPAKVKEFESLQVLPEIKHVERPASDSWQKLEKSREYKNSN--QLREYQLEG 468
Query: 113 INWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWERE 172
+NWL ++W + ILADEMGLGKTIQ+ITFL +F G GPFL+ APLSTI NWERE
Sbjct: 469 MNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFLRG-IHGPFLIIAPLSTITNWERE 527
Query: 173 FETWAPDFYVVTYVGDKDCRIVLRDHDISWED 204
F TW + + Y G + R +++ +++ + D
Sbjct: 528 FRTWT-EMNAIVYHGSQISRQMIQQYEMVYRD 558
>sp|Q06A37|CHD7_CHICK Chromodomain-helicase-DNA-binding protein 7 OS=Gallus gallus GN=CHD7
PE=2 SV=1
Length = 3011
Score = 117 bits (292), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 61/128 (47%), Positives = 83/128 (64%), Gaps = 4/128 (3%)
Query: 81 EKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQT 140
E+P D KK E + ++ +L YQLEG+NWL ++W + ILADEMGLGKTIQ+
Sbjct: 947 ERPPADDWKKSESSREYKNNN--KLREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQS 1004
Query: 141 ITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDI 200
ITFLY ++ +G GPFLV APLSTI NWEREF TW + VV Y G + R ++ +++
Sbjct: 1005 ITFLYEIYLKG-IHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYHGSQASRRTIQLYEM 1062
Query: 201 SWEDTANR 208
++D R
Sbjct: 1063 YFKDPQGR 1070
>sp|A2AJK6|CHD7_MOUSE Chromodomain-helicase-DNA-binding protein 7 OS=Mus musculus GN=Chd7
PE=1 SV=1
Length = 2986
Score = 116 bits (291), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/128 (47%), Positives = 83/128 (64%), Gaps = 4/128 (3%)
Query: 81 EKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQT 140
E+P D KK E + ++ +L YQLEG+NWL ++W + ILADEMGLGKTIQ+
Sbjct: 936 ERPPADDWKKSESSREYKNNN--KLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQS 993
Query: 141 ITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDI 200
ITFLY ++ +G GPFLV APLSTI NWEREF TW + VV Y G + R ++ +++
Sbjct: 994 ITFLYEIYLKG-IHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYHGSQASRRTIQLYEM 1051
Query: 201 SWEDTANR 208
++D R
Sbjct: 1052 YFKDPQGR 1059
>sp|Q9P2D1|CHD7_HUMAN Chromodomain-helicase-DNA-binding protein 7 OS=Homo sapiens GN=CHD7
PE=1 SV=3
Length = 2997
Score = 116 bits (290), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/128 (47%), Positives = 83/128 (64%), Gaps = 4/128 (3%)
Query: 81 EKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQT 140
E+P D KK E + ++ +L YQLEG+NWL ++W + ILADEMGLGKTIQ+
Sbjct: 946 ERPPADDWKKSESSREYKNNN--KLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQS 1003
Query: 141 ITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDI 200
ITFLY ++ +G GPFLV APLSTI NWEREF TW + VV Y G + R ++ +++
Sbjct: 1004 ITFLYEIYLKG-IHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYHGSQASRRTIQLYEM 1061
Query: 201 SWEDTANR 208
++D R
Sbjct: 1062 YFKDPQGR 1069
>sp|O14139|HRP3_SCHPO Chromodomain helicase hrp3 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=hrp3 PE=1 SV=1
Length = 1388
Score = 111 bits (278), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 50/112 (44%), Positives = 71/112 (63%), Gaps = 2/112 (1%)
Query: 89 KKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLF 148
+K E+QP ++ TG +L +QL G+NW+ Y W +N + ILADEMGLGKT+QT+ FL L
Sbjct: 361 RKLEQQPSYI--TGGELRDFQLTGVNWMAYLWHKNENGILADEMGLGKTVQTVAFLSYLA 418
Query: 149 KEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDI 200
GPFLV PLST+ W+ WA D ++Y+G+ R V+RD++
Sbjct: 419 HSLRQHGPFLVVVPLSTVPAWQETLALWASDMNCISYLGNTTSRQVIRDYEF 470
>sp|B5DE69|CHD8_XENTR Chromodomain-helicase-DNA-binding protein 8 OS=Xenopus tropicalis
GN=chd8 PE=2 SV=2
Length = 2184
Score = 110 bits (276), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 53/108 (49%), Positives = 71/108 (65%), Gaps = 2/108 (1%)
Query: 101 TGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVS 160
G QL YQLEG+NWL ++W + ILADEMGLGKTIQ+ITFL ++ G +GPFLV
Sbjct: 751 NGNQLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSITFLQEVYNVG-IRGPFLVI 809
Query: 161 APLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANR 208
APLSTI NWEREF +W + Y G R +++ +++ +D+ R
Sbjct: 810 APLSTITNWEREFGSWT-QMNTIVYHGSLASRQMIQQYEMYCKDSKGR 856
>sp|Q09XV5|CHD8_MOUSE Chromodomain-helicase-DNA-binding protein 8 OS=Mus musculus GN=Chd8
PE=1 SV=1
Length = 2582
Score = 110 bits (275), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 52/105 (49%), Positives = 69/105 (65%), Gaps = 2/105 (1%)
Query: 104 QLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPL 163
QL YQLEG+NWL ++W + ILADEMGLGKTIQ+I FL ++ G GPFLV APL
Sbjct: 812 QLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVYNVG-IHGPFLVIAPL 870
Query: 164 STIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANR 208
STI NWEREF TW + + Y G R +++ +++ +D+ R
Sbjct: 871 STITNWEREFNTWT-EMNTIVYHGSLASRQMIQQYEMYCKDSRGR 914
>sp|Q9HCK8|CHD8_HUMAN Chromodomain-helicase-DNA-binding protein 8 OS=Homo sapiens GN=CHD8
PE=1 SV=5
Length = 2581
Score = 110 bits (274), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 52/105 (49%), Positives = 69/105 (65%), Gaps = 2/105 (1%)
Query: 104 QLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPL 163
QL YQLEG+NWL ++W + ILADEMGLGKTIQ+I FL ++ G GPFLV APL
Sbjct: 810 QLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVYNVG-IHGPFLVIAPL 868
Query: 164 STIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANR 208
STI NWEREF TW + + Y G R +++ +++ +D+ R
Sbjct: 869 STITNWEREFNTWT-EMNTIVYHGSLASRQMIQQYEMYCKDSRGR 912
>sp|Q9JIX5|CHD8_RAT Chromodomain-helicase-DNA-binding protein 8 OS=Rattus norvegicus
GN=Chd8 PE=1 SV=2
Length = 2581
Score = 110 bits (274), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 52/105 (49%), Positives = 69/105 (65%), Gaps = 2/105 (1%)
Query: 104 QLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPL 163
QL YQLEG+NWL ++W + ILADEMGLGKTIQ+I FL ++ G GPFLV APL
Sbjct: 810 QLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVYNVG-IHGPFLVIAPL 868
Query: 164 STIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANR 208
STI NWEREF TW + + Y G R +++ +++ +D+ R
Sbjct: 869 STITNWEREFNTWT-EMNTIVYHGSLASRQMIQQYEMYCKDSRGR 912
>sp|Q9US25|HRP1_SCHPO Chromodomain helicase hrp1 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=hrp1 PE=1 SV=1
Length = 1373
Score = 107 bits (267), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 68/112 (60%), Gaps = 2/112 (1%)
Query: 89 KKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLF 148
+K EKQP ++ G ++ +QL GINW+ Y W +N + ILADEMGLGKT+QT+ FL L
Sbjct: 376 RKLEKQPSYI--KGGEIRDFQLTGINWMAYLWHRNENGILADEMGLGKTVQTVCFLSYLV 433
Query: 149 KEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDI 200
GPFL+ PLST+ W+ W PD + Y G+ + R +R+++
Sbjct: 434 HSLKQHGPFLIVVPLSTVPAWQETLANWTPDLNSICYTGNTESRANIREYEF 485
>sp|B0R0I6|CHD8_DANRE Chromodomain-helicase-DNA-binding protein 8 OS=Danio rerio GN=chd8
PE=3 SV=2
Length = 2511
Score = 106 bits (265), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 66/104 (63%), Gaps = 2/104 (1%)
Query: 101 TGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVS 160
G QL YQLEG+NWL ++W + ILADEMGLGKTIQ+I L +F G + PF++
Sbjct: 843 NGNQLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIALLSEMFSAG-VQSPFMII 901
Query: 161 APLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWED 204
APLSTI NWEREF W D + Y G R +++ +++ +D
Sbjct: 902 APLSTITNWEREFSNWT-DMNAIVYHGSLASRQMIQQYEMYCKD 944
>sp|P32657|CHD1_YEAST Chromo domain-containing protein 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CHD1 PE=1 SV=1
Length = 1468
Score = 103 bits (256), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 72/119 (60%), Gaps = 5/119 (4%)
Query: 85 TDLRKKYEK---QPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTI 141
T R ++EK QPPF+ G +L +QL GINW+ + W + + ILADEMGLGKT+QT+
Sbjct: 355 TSQRPRFEKLSVQPPFI--KGGELRDFQLTGINWMAFLWSKGDNGILADEMGLGKTVQTV 412
Query: 142 TFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDI 200
F+ L GP ++ PLST+ W FE WAPD + Y+G++ R +R+++
Sbjct: 413 AFISWLIFARRQNGPHIIVVPLSTMPAWLDTFEKWAPDLNCICYMGNQKSRDTIREYEF 471
>sp|P32597|STH1_YEAST Nuclear protein STH1/NPS1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=STH1 PE=1 SV=1
Length = 1359
Score = 100 bits (250), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 69/114 (60%), Gaps = 3/114 (2%)
Query: 87 LRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYS 146
+++K +KQP L G L YQL G+ W+ + +++ ILADEMGLGKTIQ+I+ +
Sbjct: 454 IKEKIDKQPSIL--VGGTLKEYQLRGLEWMVSLYNNHLNGILADEMGLGKTIQSISLITY 511
Query: 147 LFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDI 200
L++ GPFLV PLSTI NW EFE WAP + Y G + R L+ H I
Sbjct: 512 LYEVKKDIGPFLVIVPLSTITNWTLEFEKWAPSLNTIIYKGTPNQRHSLQ-HQI 564
>sp|A7TJI3|INO80_VANPO Putative DNA helicase INO80 OS=Vanderwaltozyma polyspora (strain
ATCC 22028 / DSM 70294) GN=INO80 PE=3 SV=1
Length = 1556
Score = 100 bits (249), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 91/167 (54%), Gaps = 13/167 (7%)
Query: 30 DDDDDEDLKAAYFNDGKKKKSKGRGKTKTKELQEDEDGASGSKPRRYTPPPEKPTTDLRK 89
D++DD++L+ + K R KTK + D D ++G + P T L +
Sbjct: 738 DNEDDDELRRKAAQNASNVLQKSREKTK----KFDNDTSNGEELNFQNP------TSLGE 787
Query: 90 KYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFK 149
+QP L T L YQL+G+NWL + Q I+ ILADEMGLGKT+Q+I+ L L +
Sbjct: 788 VVIEQPSILACT---LKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLAE 844
Query: 150 EGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLR 196
+ + GPFLV P ST+ NW E + P F ++ Y G+ + R +LR
Sbjct: 845 KYNIWGPFLVVTPASTLHNWVNEISKFVPQFKILPYWGNSNDRKILR 891
>sp|Q9UTN6|SNF21_SCHPO Chromatin structure-remodeling complex subunit snf21
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=snf21 PE=1 SV=1
Length = 1199
Score = 100 bits (249), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 65/110 (59%), Gaps = 2/110 (1%)
Query: 86 DLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLY 145
++R+ +QP L G +L YQL G+ W+ + +++ ILADEMGLGKTIQTI+ +
Sbjct: 400 NIREVVTEQPSIL--VGGKLKEYQLRGLQWMISLYNNHLNGILADEMGLGKTIQTISLIT 457
Query: 146 SLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVL 195
L ++ GPFLV PLST+ NW EFE WAP + Y G R L
Sbjct: 458 HLIEKKRQNGPFLVIVPLSTLTNWTMEFERWAPSIVKIVYKGPPQVRKAL 507
>sp|A4R227|INO80_MAGO7 Putative DNA helicase INO80 OS=Magnaporthe oryzae (strain 70-15 /
ATCC MYA-4617 / FGSC 8958) GN=INO80 PE=3 SV=1
Length = 1944
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 65/104 (62%), Gaps = 3/104 (2%)
Query: 93 KQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGH 152
+QP L T L YQL+G+NWL + Q I+ ILADEMGLGKTIQ+I+ + L +
Sbjct: 1069 EQPKLLTAT---LKEYQLKGLNWLVNLYEQGINGILADEMGLGKTIQSISVMAYLAEHHD 1125
Query: 153 CKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLR 196
GPFLV AP ST+ NWE+E + + PD +V Y G R +LR
Sbjct: 1126 IWGPFLVVAPASTLHNWEQEIKRFVPDLKIVPYWGSASDRKILR 1169
>sp|Q74Z27|INO80_ASHGO Putative DNA helicase INO80 OS=Ashbya gossypii (strain ATCC 10895 /
CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=INO80 PE=3 SV=2
Length = 1414
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 90/167 (53%), Gaps = 13/167 (7%)
Query: 30 DDDDDEDLKAAYFNDGKKKKSKGRGKTKTKELQEDEDGASGSKPRRYTPPPEKPTTDLRK 89
D++DDE+L K ++ +T+E + DG SG P T L +
Sbjct: 593 DNEDDEELHR------KAAQNASNALKETREKAKAFDGMSGDDEELNFQNP----TSLGE 642
Query: 90 KYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFK 149
+QP L T L YQL+G+NWL + Q I+ ILADEMGLGKT+Q+I+ L L +
Sbjct: 643 ITIEQPKILACT---LKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLAE 699
Query: 150 EGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLR 196
+ GPF+V P ST+ NW E + + PDF ++ Y G+ + R +LR
Sbjct: 700 RYNIWGPFIVVTPASTLHNWVNEIQKFVPDFKILPYWGNGNDRKILR 746
>sp|Q9CXF7|CHD1L_MOUSE Chromodomain-helicase-DNA-binding protein 1-like OS=Mus musculus
GN=Chd1l PE=2 SV=1
Length = 900
Score = 97.4 bits (241), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 48/96 (50%), Positives = 60/96 (62%)
Query: 101 TGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVS 160
TG++L +YQLEG+NWL + IL DEMGLGKT QTI L L + +GPFLV
Sbjct: 36 TGIRLRSYQLEGVNWLVQCFHCQNGCILGDEMGLGKTCQTIALLIYLVGRLNDEGPFLVL 95
Query: 161 APLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLR 196
PLS + NW+ E E +AP VTY GDK+ R L+
Sbjct: 96 CPLSVLSNWKEEMERFAPGLSCVTYTGDKEERARLQ 131
>sp|P22082|SNF2_YEAST Transcription regulatory protein SNF2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SNF2 PE=1 SV=1
Length = 1703
Score = 97.1 bits (240), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 67/106 (63%), Gaps = 2/106 (1%)
Query: 87 LRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYS 146
+++ +KQP L G L YQ++G+ W+ + +++ ILADEMGLGKTIQTI+ L
Sbjct: 751 IKEDIKKQPSIL--VGGTLKDYQIKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTY 808
Query: 147 LFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCR 192
L++ + +GP+LV PLST+ NW EF WAP +++ G + R
Sbjct: 809 LYEMKNIRGPYLVIVPLSTLSNWSSEFAKWAPTLRTISFKGSPNER 854
>sp|Q6BKC2|SWR1_DEBHA Helicase SWR1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767
/ JCM 1990 / NBRC 0083 / IGC 2968) GN=SWR1 PE=3 SV=2
Length = 1616
Score = 97.1 bits (240), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 59/98 (60%), Gaps = 3/98 (3%)
Query: 95 PPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCK 154
PP L T L YQ +G+NWL + + ILADEMGLGKTIQTI+ L L E H
Sbjct: 774 PPLLRGT---LRPYQKQGLNWLASLYNNGTNGILADEMGLGKTIQTISLLAYLAAEHHIW 830
Query: 155 GPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCR 192
GP L+ P S ++NWE EF+ +AP F V+TY G R
Sbjct: 831 GPHLIVVPTSVMLNWEMEFKKFAPGFKVLTYYGSPQQR 868
>sp|Q4IL82|INO80_GIBZE Putative DNA helicase INO80 OS=Gibberella zeae (strain PH-1 / ATCC
MYA-4620 / FGSC 9075 / NRRL 31084) GN=INO80 PE=3 SV=1
Length = 1904
Score = 96.7 bits (239), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 47/104 (45%), Positives = 67/104 (64%), Gaps = 3/104 (2%)
Query: 93 KQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGH 152
+QP ++ QL YQL+G+NWL + Q I+ ILADEMGLGKT+Q+I+ + L ++
Sbjct: 1036 EQPKLIN---AQLKEYQLKGLNWLVNLYEQGINGILADEMGLGKTVQSISVMAYLAEKHD 1092
Query: 153 CKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLR 196
GPFLV AP ST+ NW++E + P+F ++ Y G R VLR
Sbjct: 1093 IWGPFLVVAPASTLHNWQQEIAKFVPEFKILPYWGGASDRKVLR 1136
>sp|Q7S133|SWR1_NEUCR Helicase swr-1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A /
CBS 708.71 / DSM 1257 / FGSC 987) GN=swr-1 PE=3 SV=1
Length = 1845
Score = 96.7 bits (239), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 70/130 (53%), Gaps = 10/130 (7%)
Query: 65 EDGASGSKP--RRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQ 122
E S KP R+ +P P PT + + PFL L YQ G++WL +
Sbjct: 911 ELAVSVQKPDSRQSSPQPTTPTV------KTEIPFL--LRGTLREYQHHGLDWLAGLYAN 962
Query: 123 NIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYV 182
N + ILADEMGLGKTIQTI L L GP LV P S ++NWE EF+ W P F +
Sbjct: 963 NTNGILADEMGLGKTIQTIALLAHLACHHEVWGPHLVIVPTSVMLNWEMEFKKWCPGFKI 1022
Query: 183 VTYVGDKDCR 192
+TY G+++ R
Sbjct: 1023 LTYYGNQEER 1032
>sp|Q0UG82|INO80_PHANO Putative DNA helicase INO80 OS=Phaeosphaeria nodorum (strain SN15 /
ATCC MYA-4574 / FGSC 10173) GN=INO80 PE=3 SV=2
Length = 1673
Score = 96.7 bits (239), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/103 (47%), Positives = 65/103 (63%), Gaps = 3/103 (2%)
Query: 94 QPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHC 153
QP L+ T L YQL+G+NWL + Q I+ ILADEMGLGKT+Q+I+ + L + +
Sbjct: 813 QPKLLNCT---LKEYQLKGLNWLVNLYEQGINGILADEMGLGKTVQSISVMAYLAERYNI 869
Query: 154 KGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLR 196
GPFLV AP ST+ NW++E + PD V+ Y G R VLR
Sbjct: 870 WGPFLVIAPASTLHNWQQEIAKFVPDLNVIPYWGTAKDRKVLR 912
>sp|A7Z019|SMCA4_BOVIN Transcription activator BRG1 OS=Bos taurus GN=SMARCA4 PE=2 SV=1
Length = 1606
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 54/88 (61%)
Query: 105 LHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLS 164
L YQ++G+ WL + N++ ILADEMGLGKTIQTI + L + GPFL+ PLS
Sbjct: 746 LKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLS 805
Query: 165 TIINWEREFETWAPDFYVVTYVGDKDCR 192
T+ NW EF+ WAP V+Y G R
Sbjct: 806 TLSNWAYEFDKWAPSVVKVSYKGSPAAR 833
>sp|Q6FK48|SWR1_CANGA Helicase SWR1 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM
3761 / NBRC 0622 / NRRL Y-65) GN=SWR1 PE=3 SV=1
Length = 1450
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 57/88 (64%)
Query: 105 LHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLS 164
L YQ +G+NWL + N + ILADEMGLGKTIQTI+ L L E H GP L+ P S
Sbjct: 628 LRTYQKQGLNWLASLYNNNTNGILADEMGLGKTIQTISLLSYLACEKHNWGPHLIVVPTS 687
Query: 165 TIINWEREFETWAPDFYVVTYVGDKDCR 192
++NWE EF+ +AP F V+TY G+ R
Sbjct: 688 VLLNWEMEFKRFAPGFKVLTYYGNPQQR 715
>sp|Q872I5|INO80_NEUCR Putative DNA helicase ino-80 OS=Neurospora crassa (strain ATCC 24698
/ 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=ino-80 PE=3 SV=3
Length = 1997
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/104 (47%), Positives = 66/104 (63%), Gaps = 3/104 (2%)
Query: 93 KQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGH 152
+QP L+ QL YQL+G+NWL + Q I+ ILADEMGLGKT+Q+I+ + L ++
Sbjct: 1109 EQPKLLN---CQLKEYQLKGLNWLVNLYEQGINGILADEMGLGKTVQSISVMAYLAEKYD 1165
Query: 153 CKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLR 196
GPFLV AP ST+ NW++E + P F V+ Y G R VLR
Sbjct: 1166 IWGPFLVVAPASTLHNWQQEITKFVPQFKVLPYWGTAGDRKVLR 1209
>sp|Q3TKT4|SMCA4_MOUSE Transcription activator BRG1 OS=Mus musculus GN=Smarca4 PE=1 SV=1
Length = 1613
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 54/88 (61%)
Query: 105 LHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLS 164
L YQ++G+ WL + N++ ILADEMGLGKTIQTI + L + GPFL+ PLS
Sbjct: 754 LKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLS 813
Query: 165 TIINWEREFETWAPDFYVVTYVGDKDCR 192
T+ NW EF+ WAP V+Y G R
Sbjct: 814 TLSNWAYEFDKWAPSVVKVSYKGSPAAR 841
>sp|P25439|BRM_DROME ATP-dependent helicase brm OS=Drosophila melanogaster GN=brm PE=1
SV=2
Length = 1638
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 59/94 (62%)
Query: 105 LHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLS 164
L YQ++G+ WL + N++ ILADEMGLGKTIQTI+ + L GP+L+ PLS
Sbjct: 773 LKEYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTISLVTYLMDRKKVMGPYLIIVPLS 832
Query: 165 TIINWEREFETWAPDFYVVTYVGDKDCRIVLRDH 198
T+ NW EFE WAP VV+Y G R +L++
Sbjct: 833 TLPNWVLEFEKWAPAVGVVSYKGSPQGRRLLQNQ 866
>sp|P51532|SMCA4_HUMAN Transcription activator BRG1 OS=Homo sapiens GN=SMARCA4 PE=1 SV=2
Length = 1647
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 54/88 (61%)
Query: 105 LHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLS 164
L YQ++G+ WL + N++ ILADEMGLGKTIQTI + L + GPFL+ PLS
Sbjct: 754 LKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLS 813
Query: 165 TIINWEREFETWAPDFYVVTYVGDKDCR 192
T+ NW EF+ WAP V+Y G R
Sbjct: 814 TLSNWAYEFDKWAPSVVKVSYKGSPAAR 841
>sp|Q8K1P7|SMCA4_RAT Transcription activator BRG1 OS=Rattus norvegicus GN=Smarca4 PE=1
SV=1
Length = 1613
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 54/88 (61%)
Query: 105 LHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLS 164
L YQ++G+ WL + N++ ILADEMGLGKTIQTI + L + GPFL+ PLS
Sbjct: 754 LKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLS 813
Query: 165 TIINWEREFETWAPDFYVVTYVGDKDCR 192
T+ NW EF+ WAP V+Y G R
Sbjct: 814 TLSNWAYEFDKWAPSVVKVSYKGSPAAR 841
>sp|Q6BGY8|INO80_DEBHA Putative DNA helicase INO80 OS=Debaryomyces hansenii (strain ATCC
36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=INO80 PE=3 SV=2
Length = 1364
Score = 95.9 bits (237), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 72/126 (57%), Gaps = 8/126 (6%)
Query: 79 PPEKPTTDLRKKYEKQPPFLDDTGMQ--------LHAYQLEGINWLRYSWGQNIDTILAD 130
P + P T+ + + P L D + L YQ++G+NWL + Q I+ ILAD
Sbjct: 533 PLKNPDTNGEEMNFQNPTLLGDINISQPDLLKCTLKEYQVKGLNWLANLYEQGINGILAD 592
Query: 131 EMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKD 190
EMGLGKT+Q+I+ L L + + GPFLV P ST+ NW++E + P+F V+ Y G+
Sbjct: 593 EMGLGKTVQSISVLAYLAETHNIWGPFLVVTPASTLHNWQQEISRFVPEFKVIPYWGNAK 652
Query: 191 CRIVLR 196
R VLR
Sbjct: 653 DRKVLR 658
>sp|Q9XFH4|DDM1_ARATH ATP-dependent DNA helicase DDM1 OS=Arabidopsis thaliana GN=DDM1
PE=1 SV=1
Length = 764
Score = 95.9 bits (237), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 92/189 (48%), Gaps = 25/189 (13%)
Query: 8 VRGAAARGKKKKKSTGRASKAADDDDDEDLKAAYFNDGKKKKSKGRGKTKTKELQEDEDG 67
+ + + + +K GR KAA ++ K A +SK G+T +L E+E
Sbjct: 129 IESESQKAEPEKTGRGRKRKAASQYNNTKAKRAV--AAMISRSKEDGETINSDLTEEE-- 184
Query: 68 ASGSKPRRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTI 127
T ++ + E P TG QL +YQL+G+ WL W ++ I
Sbjct: 185 -----------------TVIKLQNELCPLL---TGGQLKSYQLKGVKWLISLWQNGLNGI 224
Query: 128 LADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVG 187
LAD+MGLGKTIQTI FL L G GP+LV APLST+ NW E + P + Y G
Sbjct: 225 LADQMGLGKTIQTIGFLSHLKGNG-LDGPYLVIAPLSTLSNWFNEIARFTPSINAIIYHG 283
Query: 188 DKDCRIVLR 196
DK+ R LR
Sbjct: 284 DKNQRDELR 292
>sp|Q3B7N1|CHD1L_BOVIN Chromodomain-helicase-DNA-binding protein 1-like OS=Bos taurus
GN=CHD1L PE=2 SV=1
Length = 897
Score = 95.5 bits (236), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 57/96 (59%)
Query: 101 TGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVS 160
TG+ L YQL+G+NWL + IL DEMGLGKT QTI L + +GPFL+
Sbjct: 44 TGIHLRPYQLQGVNWLAQCFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLNDEGPFLIL 103
Query: 161 APLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLR 196
PLS + NW+ E E +AP VTY GDKD R L+
Sbjct: 104 CPLSVLSNWKEEMERFAPGLSCVTYAGDKDKRACLQ 139
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.134 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,630,449
Number of Sequences: 539616
Number of extensions: 4135918
Number of successful extensions: 19563
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 283
Number of HSP's successfully gapped in prelim test: 299
Number of HSP's that attempted gapping in prelim test: 17929
Number of HSP's gapped (non-prelim): 1471
length of query: 209
length of database: 191,569,459
effective HSP length: 112
effective length of query: 97
effective length of database: 131,132,467
effective search space: 12719849299
effective search space used: 12719849299
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 58 (26.9 bits)