Your job contains 1 sequence.
>psy14604
GKSKRRPVRGAAARGKKKKKSTGRASKAADDDDDEDLKAAYFNDGKKKKSKGRGKTKTKE
LQEDEDGASGSKPRRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSW
GQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDF
YVVTYVGDKDCRIVLRDHDISWEDTANRG
The BLAST search returned 11 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy14604
(209 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0262519 - symbol:Mi-2 species:7227 "Drosophila mel... 616 1.3e-58 1
UNIPROTKB|F5GWX5 - symbol:CHD4 "Chromodomain-helicase-DNA... 543 7.4e-51 1
UNIPROTKB|E2RHA0 - symbol:CHD4 "Uncharacterized protein" ... 543 7.5e-51 1
UNIPROTKB|Q14839 - symbol:CHD4 "Chromodomain-helicase-DNA... 543 7.5e-51 1
UNIPROTKB|F1SLR5 - symbol:CHD4 "Uncharacterized protein" ... 543 7.5e-51 1
MGI|MGI:1344380 - symbol:Chd4 "chromodomain helicase DNA ... 543 7.5e-51 1
UNIPROTKB|E9PU01 - symbol:Chd4 "Protein Chd4" species:101... 543 7.5e-51 1
UNIPROTKB|J9NW81 - symbol:CHD4 "Uncharacterized protein" ... 543 7.6e-51 1
UNIPROTKB|F1N3F6 - symbol:CHD4 "Uncharacterized protein" ... 543 7.6e-51 1
UNIPROTKB|F1LM59 - symbol:Chd4 "Protein Chd4" species:101... 543 7.7e-51 1
UNIPROTKB|F1NH79 - symbol:CHD4 "Uncharacterized protein" ... 539 2.0e-50 1
ZFIN|ZDB-GENE-041111-187 - symbol:chd4a "chromodomain hel... 527 3.8e-49 1
ZFIN|ZDB-GENE-030131-4532 - symbol:chd4b "chromodomain he... 524 8.2e-49 1
RGD|1582725 - symbol:Chd5 "chromodomain helicase DNA bind... 517 4.5e-48 1
UNIPROTKB|K7EMY3 - symbol:CHD5 "Chromodomain-helicase-DNA... 511 5.8e-48 1
UNIPROTKB|F1LPP7 - symbol:Chd3 "Protein Chd3" species:101... 513 6.3e-48 2
UNIPROTKB|F1M7Q0 - symbol:Chd3 "Protein Chd3" species:101... 513 6.6e-48 2
UNIPROTKB|J9NRN3 - symbol:CHD5 "Uncharacterized protein" ... 511 7.9e-48 1
UNIPROTKB|F2Z2R5 - symbol:CHD5 "Chromodomain-helicase-DNA... 511 8.3e-48 1
RGD|1311923 - symbol:Chd3 "chromodomain helicase DNA bind... 513 1.2e-47 1
UNIPROTKB|F1N544 - symbol:CHD3 "Uncharacterized protein" ... 513 1.3e-47 1
UNIPROTKB|E2RTI2 - symbol:CHD3 "Uncharacterized protein" ... 513 1.3e-47 1
UNIPROTKB|Q12873 - symbol:CHD3 "Chromodomain-helicase-DNA... 513 1.3e-47 1
UNIPROTKB|F1ST12 - symbol:CHD3 "Uncharacterized protein" ... 513 1.3e-47 1
UNIPROTKB|E9PG89 - symbol:CHD3 "Chromodomain-helicase-DNA... 513 1.3e-47 1
UNIPROTKB|F1SSZ2 - symbol:CHD5 "Uncharacterized protein" ... 511 1.5e-47 1
UNIPROTKB|F1RIM3 - symbol:CHD5 "Uncharacterized protein" ... 511 1.6e-47 1
UNIPROTKB|E2R1M3 - symbol:CHD5 "Uncharacterized protein" ... 511 1.8e-47 1
UNIPROTKB|F1MFF9 - symbol:Bt.62145 "Uncharacterized prote... 511 1.8e-47 1
UNIPROTKB|Q8TDI0 - symbol:CHD5 "Chromodomain-helicase-DNA... 511 2.0e-47 1
UNIPROTKB|F1NH78 - symbol:F1NH78 "Uncharacterized protein... 505 7.4e-47 1
FB|FBgn0023395 - symbol:Chd3 "Chd3" species:7227 "Drosoph... 498 8.1e-47 1
WB|WBGene00002637 - symbol:let-418 species:6239 "Caenorha... 483 1.7e-44 1
UNIPROTKB|G5EBZ4 - symbol:let-418 "Protein let-418" speci... 483 1.7e-44 1
WB|WBGene00000482 - symbol:chd-3 species:6239 "Caenorhabd... 478 5.6e-44 1
UNIPROTKB|Q22516 - symbol:chd-3 "Chromodomain-helicase-DN... 478 5.6e-44 1
UNIPROTKB|E1C1A9 - symbol:CHD2 "Uncharacterized protein" ... 321 2.3e-29 2
TAIR|locus:2116747 - symbol:PKR2 "PICKLE RELATED 2" speci... 330 1.8e-28 1
ZFIN|ZDB-GENE-050419-256 - symbol:chd2 "chromodomain heli... 323 1.8e-27 1
FB|FBgn0250786 - symbol:Chd1 "Chromodomain-helicase-DNA-b... 322 2.4e-27 1
UNIPROTKB|O14647 - symbol:CHD2 "Chromodomain-helicase-DNA... 319 4.8e-27 1
UNIPROTKB|I3LRQ2 - symbol:CHD2 "Uncharacterized protein" ... 314 7.4e-27 1
UNIPROTKB|J9NSS6 - symbol:CHD2 "Uncharacterized protein" ... 314 1.1e-26 1
UNIPROTKB|J9NX79 - symbol:CHD2 "Uncharacterized protein" ... 314 1.5e-26 1
UNIPROTKB|G3MXX3 - symbol:CHD2 "Uncharacterized protein" ... 314 1.6e-26 1
UNIPROTKB|E2R5Z7 - symbol:CHD2 "Uncharacterized protein" ... 314 1.7e-26 1
UNIPROTKB|F1SA77 - symbol:CHD2 "Uncharacterized protein" ... 314 1.7e-26 1
UNIPROTKB|J9PA90 - symbol:CHD2 "Uncharacterized protein" ... 314 1.7e-26 1
UNIPROTKB|D4AD08 - symbol:Chd2 "Chromodomain helicase DNA... 313 2.1e-26 1
UNIPROTKB|I3LQZ8 - symbol:CHD2 "Uncharacterized protein" ... 308 6.6e-26 1
UNIPROTKB|I3LB58 - symbol:I3LB58 "Uncharacterized protein... 291 1.1e-25 1
UNIPROTKB|H3BTW3 - symbol:CHD9 "Chromodomain-helicase-DNA... 301 1.9e-25 1
TAIR|locus:2040184 - symbol:PKL "PICKLE" species:3702 "Ar... 301 2.7e-25 1
UNIPROTKB|H7C294 - symbol:CHD6 "Chromodomain-helicase-DNA... 292 3.3e-25 1
MGI|MGI:1924001 - symbol:Chd9 "chromodomain helicase DNA ... 304 3.3e-25 1
FB|FBgn0086902 - symbol:kis "kismet" species:7227 "Drosop... 305 5.4e-25 1
UNIPROTKB|E1BS48 - symbol:CHD9 "Uncharacterized protein" ... 301 6.2e-25 1
RGD|1594200 - symbol:LOC680231 "similar to chromodomain h... 301 6.9e-25 1
UNIPROTKB|Q3L8U1 - symbol:CHD9 "Chromodomain-helicase-DNA... 301 7.0e-25 1
UNIPROTKB|E2RDK8 - symbol:CHD9 "Uncharacterized protein" ... 300 8.9e-25 1
UNIPROTKB|F1NVT7 - symbol:CHD6 "Uncharacterized protein" ... 295 1.0e-24 1
UNIPROTKB|C9JFU2 - symbol:CHD6 "Chromodomain-helicase-DNA... 292 1.1e-24 1
UNIPROTKB|E1BDZ3 - symbol:CHD9 "Uncharacterized protein" ... 299 1.1e-24 1
RGD|1306794 - symbol:Chd1 "chromodomain helicase DNA bind... 291 1.6e-24 1
UNIPROTKB|F1NLW6 - symbol:CHD6 "Uncharacterized protein" ... 295 1.9e-24 1
UNIPROTKB|F1NLV5 - symbol:CHD6 "Uncharacterized protein" ... 295 2.0e-24 1
DICTYBASE|DDB_G0284171 - symbol:DDB_G0284171 "CHR group p... 294 2.4e-24 1
UNIPROTKB|E1BS47 - symbol:CHD7 "Chromodomain-helicase-DNA... 291 3.0e-24 1
UNIPROTKB|O14646 - symbol:CHD1 "Chromodomain-helicase-DNA... 292 3.3e-24 1
MGI|MGI:88393 - symbol:Chd1 "chromodomain helicase DNA bi... 291 4.2e-24 1
UNIPROTKB|B6ZLK2 - symbol:CHD1 "Chromodomain-helicase-DNA... 291 4.3e-24 1
UNIPROTKB|F1RN66 - symbol:CHD1 "Uncharacterized protein" ... 291 4.5e-24 1
UNIPROTKB|I3L6N4 - symbol:CHD1 "Uncharacterized protein" ... 291 4.5e-24 1
UNIPROTKB|I3LIS2 - symbol:CHD1 "Uncharacterized protein" ... 291 4.5e-24 1
UNIPROTKB|F1MGF2 - symbol:CHD1 "Uncharacterized protein" ... 291 4.6e-24 1
UNIPROTKB|F1PWD8 - symbol:CHD7 "Uncharacterized protein" ... 293 5.1e-24 1
UNIPROTKB|E1BPM4 - symbol:CHD7 "Uncharacterized protein" ... 289 5.6e-24 2
UNIPROTKB|F1RT88 - symbol:CHD7 "Uncharacterized protein" ... 289 5.8e-24 2
UNIPROTKB|F1PTH3 - symbol:CHD6 "Uncharacterized protein" ... 292 5.9e-24 1
UNIPROTKB|J9P0F6 - symbol:CHD6 "Uncharacterized protein" ... 292 5.9e-24 1
UNIPROTKB|Q8TD26 - symbol:CHD6 "Chromodomain-helicase-DNA... 292 5.9e-24 1
UNIPROTKB|F1N734 - symbol:CHD6 "Uncharacterized protein" ... 292 5.9e-24 1
UNIPROTKB|F1NSG3 - symbol:CHD7 "Chromodomain-helicase-DNA... 291 6.0e-24 1
ZFIN|ZDB-GENE-030131-497 - symbol:chd9 "chromodomain heli... 292 6.4e-24 1
ZFIN|ZDB-GENE-070912-179 - symbol:chd7 "chromodomain heli... 290 8.2e-24 2
UNIPROTKB|Q06A37 - symbol:CHD7 "Chromodomain-helicase-DNA... 291 8.4e-24 1
UNIPROTKB|H9L0N0 - symbol:H9L0N0 "Uncharacterized protein... 287 9.0e-24 1
RGD|1311921 - symbol:Chd7 "chromodomain helicase DNA bind... 289 1.4e-23 1
MGI|MGI:2444748 - symbol:Chd7 "chromodomain helicase DNA ... 289 1.4e-23 1
UNIPROTKB|Q9P2D1 - symbol:CHD7 "Chromodomain-helicase-DNA... 289 1.4e-23 1
WB|WBGene00010369 - symbol:chd-1 species:6239 "Caenorhabd... 285 1.5e-23 1
UNIPROTKB|E2QUI5 - symbol:CHD1 "Uncharacterized protein" ... 285 1.8e-23 1
UNIPROTKB|J9P6Y8 - symbol:CHD1 "Uncharacterized protein" ... 285 1.9e-23 1
UNIPROTKB|F1NP27 - symbol:CHD1 "Chromodomain-helicase-DNA... 276 1.8e-22 1
UNIPROTKB|F1N8K8 - symbol:CHD1 "Chromodomain-helicase-DNA... 276 1.8e-22 1
UNIPROTKB|B5DE69 - symbol:chd8 "Chromodomain-helicase-DNA... 276 2.3e-22 1
RGD|620696 - symbol:Chd8 "chromodomain helicase DNA bindi... 273 5.8e-22 1
MGI|MGI:1915022 - symbol:Chd8 "chromodomain helicase DNA ... 273 5.8e-22 1
UNIPROTKB|E2QUR1 - symbol:CHD8 "Uncharacterized protein" ... 272 6.1e-22 1
UNIPROTKB|F1MLB2 - symbol:CHD8 "Uncharacterized protein" ... 272 7.2e-22 1
WARNING: Descriptions of 310 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0262519 [details] [associations]
symbol:Mi-2 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=IDA;NAS] [GO:0005634
"nucleus" evidence=ISS;IDA;NAS] [GO:0004003 "ATP-dependent DNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0016581 "NuRD complex" evidence=ISS;TAS]
[GO:0006333 "chromatin assembly or disassembly" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS;IDA] [GO:0003678 "DNA
helicase activity" evidence=ISS] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0042766 "nucleosome mobilization" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007517 "muscle
organ development" evidence=IMP] [GO:0048813 "dendrite
morphogenesis" evidence=IMP] [GO:0031491 "nucleosome binding"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0070615
"nucleosome-dependent ATPase activity" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 EMBL:AE014296 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0000122
GO:GO:0048813 GO:GO:0007517 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004003 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005700 GO:GO:0042766 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0016581 InterPro:IPR023780
PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
EMBL:AF119716 EMBL:AY113368 RefSeq:NP_001163476.1
RefSeq:NP_649154.2 UniGene:Dm.28317 ProteinModelPortal:O97159
SMR:O97159 DIP:DIP-22862N IntAct:O97159 MINT:MINT-864813
STRING:O97159 PaxDb:O97159 EnsemblMetazoa:FBtr0074919
EnsemblMetazoa:FBtr0302046 GeneID:40170 KEGG:dme:Dmel_CG8103
CTD:40170 FlyBase:FBgn0262519 InParanoid:O97159 OrthoDB:EOG4T76J4
ChiTaRS:Mi-2 GenomeRNAi:40170 NextBio:817384 Bgee:O97159
GermOnline:CG8103 Uniprot:O97159
Length = 1982
Score = 616 (221.9 bits), Expect = 1.3e-58, P = 1.3e-58
Identities = 108/151 (71%), Positives = 132/151 (87%)
Query: 60 ELQEDEDGASGSKP-RRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRY 118
++++DED +P + YTPPPEKPTTDL+KKYE QP FL+ TGMQLH YQ+EGINWLRY
Sbjct: 689 KVEDDED-----RPVKHYTPPPEKPTTDLKKKYEDQPAFLEGTGMQLHPYQIEGINWLRY 743
Query: 119 SWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAP 178
SWGQ IDTILADEMGLGKTIQT+TFLYSL+KEGHC+GPFLV+ PLST++NWEREFE WAP
Sbjct: 744 SWGQGIDTILADEMGLGKTIQTVTFLYSLYKEGHCRGPFLVAVPLSTLVNWEREFELWAP 803
Query: 179 DFYVVTYVGDKDCRIVLRDHDISWEDTANRG 209
DFY +TY+GDKD R V+R++++S+E+ A RG
Sbjct: 804 DFYCITYIGDKDSRAVIRENELSFEEGAIRG 834
>UNIPROTKB|F5GWX5 [details] [associations]
symbol:CHD4 "Chromodomain-helicase-DNA-binding protein 4"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:AC006064
IPI:IPI00000846 HGNC:HGNC:1919 ChiTaRS:CHD4
ProteinModelPortal:F5GWX5 SMR:F5GWX5 PRIDE:F5GWX5
Ensembl:ENST00000544040 UCSC:uc001qpn.3 ArrayExpress:F5GWX5
Bgee:F5GWX5 Uniprot:F5GWX5
Length = 1905
Score = 543 (196.2 bits), Expect = 7.4e-51, P = 7.4e-51
Identities = 102/155 (65%), Positives = 117/155 (75%)
Query: 60 ELQEDEDGASGSKP-----RRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGIN 114
EL E+G G K R+ PPE PT D KYE+QP +LD TG LH YQ+EG+N
Sbjct: 669 ELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLN 728
Query: 115 WLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFE 174
WLR+SW Q DTILADEMGLGKT+QT FLYSL+KEGH KGPFLVSAPLSTIINWEREFE
Sbjct: 729 WLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFE 788
Query: 175 TWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRG 209
WAPD YVVTYVGDKD R ++R+++ S+ED A RG
Sbjct: 789 MWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRG 823
>UNIPROTKB|E2RHA0 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1108 KO:K11643 EMBL:AAEX03015287 RefSeq:XP_867754.2
Ensembl:ENSCAFT00000023774 GeneID:477714 KEGG:cfa:477714
Uniprot:E2RHA0
Length = 1912
Score = 543 (196.2 bits), Expect = 7.5e-51, P = 7.5e-51
Identities = 102/155 (65%), Positives = 117/155 (75%)
Query: 60 ELQEDEDGASGSKP-----RRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGIN 114
EL E+G G K R+ PPE PT D KYE+QP +LD TG LH YQ+EG+N
Sbjct: 676 ELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLN 735
Query: 115 WLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFE 174
WLR+SW Q DTILADEMGLGKT+QT FLYSL+KEGH KGPFLVSAPLSTIINWEREFE
Sbjct: 736 WLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFE 795
Query: 175 TWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRG 209
WAPD YVVTYVGDKD R ++R+++ S+ED A RG
Sbjct: 796 MWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRG 830
>UNIPROTKB|Q14839 [details] [associations]
symbol:CHD4 "Chromodomain-helicase-DNA-binding protein 4"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005813 "centrosome" evidence=IDA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006357 GO:GO:0006351 GO:GO:0016568
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004003 InterPro:IPR019786 PROSITE:PS01359
Pathway_Interaction_DB:hdac_classi_pathway InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016581 InterPro:IPR023780 PROSITE:PS00598
HOGENOM:HOG000231124 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326 EMBL:X86691
EMBL:AC006064 EMBL:BC038596 IPI:IPI00000846 IPI:IPI00455210
RefSeq:NP_001264.2 UniGene:Hs.162233 PDB:1MM2 PDB:1MM3 PDB:2EE1
PDB:2L5U PDB:2L75 PDBsum:1MM2 PDBsum:1MM3 PDBsum:2EE1 PDBsum:2L5U
PDBsum:2L75 ProteinModelPortal:Q14839 SMR:Q14839 DIP:DIP-31183N
IntAct:Q14839 MINT:MINT-349766 STRING:Q14839 PhosphoSite:Q14839
DMDM:311033360 PaxDb:Q14839 PRIDE:Q14839 DNASU:1108
Ensembl:ENST00000309577 Ensembl:ENST00000357008
Ensembl:ENST00000544484 GeneID:1108 KEGG:hsa:1108 UCSC:uc001qpo.3
UCSC:uc001qpp.3 CTD:1108 GeneCards:GC12M006679 H-InvDB:HIX0201859
HGNC:HGNC:1919 HPA:HPA012008 MIM:603277 neXtProt:NX_Q14839
PharmGKB:PA26455 KO:K11643 OMA:ERMLLCR OrthoDB:EOG4WH8JX
ChiTaRS:CHD4 EvolutionaryTrace:Q14839 GenomeRNAi:1108 NextBio:4598
PMAP-CutDB:Q14839 ArrayExpress:Q14839 Bgee:Q14839 CleanEx:HS_CHD4
Genevestigator:Q14839 GermOnline:ENSG00000111642 Uniprot:Q14839
Length = 1912
Score = 543 (196.2 bits), Expect = 7.5e-51, P = 7.5e-51
Identities = 102/155 (65%), Positives = 117/155 (75%)
Query: 60 ELQEDEDGASGSKP-----RRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGIN 114
EL E+G G K R+ PPE PT D KYE+QP +LD TG LH YQ+EG+N
Sbjct: 676 ELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLN 735
Query: 115 WLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFE 174
WLR+SW Q DTILADEMGLGKT+QT FLYSL+KEGH KGPFLVSAPLSTIINWEREFE
Sbjct: 736 WLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFE 795
Query: 175 TWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRG 209
WAPD YVVTYVGDKD R ++R+++ S+ED A RG
Sbjct: 796 MWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRG 830
>UNIPROTKB|F1SLR5 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1108 KO:K11643 OMA:ERMLLCR EMBL:CU914489 EMBL:GACC01000070
RefSeq:XP_003126577.3 UniGene:Ssc.25044 Ensembl:ENSSSCT00000000759
GeneID:100515610 KEGG:ssc:100515610 Uniprot:F1SLR5
Length = 1912
Score = 543 (196.2 bits), Expect = 7.5e-51, P = 7.5e-51
Identities = 102/155 (65%), Positives = 117/155 (75%)
Query: 60 ELQEDEDGASGSKP-----RRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGIN 114
EL E+G G K R+ PPE PT D KYE+QP +LD TG LH YQ+EG+N
Sbjct: 676 ELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLN 735
Query: 115 WLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFE 174
WLR+SW Q DTILADEMGLGKT+QT FLYSL+KEGH KGPFLVSAPLSTIINWEREFE
Sbjct: 736 WLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFE 795
Query: 175 TWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRG 209
WAPD YVVTYVGDKD R ++R+++ S+ED A RG
Sbjct: 796 MWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRG 830
>MGI|MGI:1344380 [details] [associations]
symbol:Chd4 "chromodomain helicase DNA binding protein 4"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=ISO] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=ISO;IDA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016818
"hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0043234
"protein complex" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 MGI:MGI:1344380 Pfam:PF00385
GO:GO:0005524 GO:GO:0005737 GO:GO:0005813 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351
GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 PROSITE:PS00598
GeneTree:ENSGT00560000076896 HOGENOM:HOG000231124
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
HOVERGEN:HBG005326 CTD:1108 KO:K11643 OrthoDB:EOG4WH8JX
ChiTaRS:CHD4 EMBL:BC058578 IPI:IPI00396802 RefSeq:NP_666091.1
UniGene:Mm.333388 ProteinModelPortal:Q6PDQ2 SMR:Q6PDQ2
DIP:DIP-59651N IntAct:Q6PDQ2 STRING:Q6PDQ2 PhosphoSite:Q6PDQ2
PaxDb:Q6PDQ2 PRIDE:Q6PDQ2 Ensembl:ENSMUST00000056889 GeneID:107932
KEGG:mmu:107932 UCSC:uc009dtk.1 NextBio:359735 PMAP-CutDB:Q6PDQ2
Bgee:Q6PDQ2 CleanEx:MM_CHD4 Genevestigator:Q6PDQ2
GermOnline:ENSMUSG00000063870 Uniprot:Q6PDQ2
Length = 1915
Score = 543 (196.2 bits), Expect = 7.5e-51, P = 7.5e-51
Identities = 102/155 (65%), Positives = 117/155 (75%)
Query: 60 ELQEDEDGASGSKP-----RRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGIN 114
EL E+G G K R+ PPE PT D KYE+QP +LD TG LH YQ+EG+N
Sbjct: 669 ELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLN 728
Query: 115 WLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFE 174
WLR+SW Q DTILADEMGLGKT+QT FLYSL+KEGH KGPFLVSAPLSTIINWEREFE
Sbjct: 729 WLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFE 788
Query: 175 TWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRG 209
WAPD YVVTYVGDKD R ++R+++ S+ED A RG
Sbjct: 789 MWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRG 823
>UNIPROTKB|E9PU01 [details] [associations]
symbol:Chd4 "Protein Chd4" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 RGD:620064 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
IPI:IPI01016558 PRIDE:E9PU01 Ensembl:ENSRNOT00000055970
ArrayExpress:E9PU01 Uniprot:E9PU01
Length = 1915
Score = 543 (196.2 bits), Expect = 7.5e-51, P = 7.5e-51
Identities = 102/155 (65%), Positives = 117/155 (75%)
Query: 60 ELQEDEDGASGSKP-----RRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGIN 114
EL E+G G K R+ PPE PT D KYE+QP +LD TG LH YQ+EG+N
Sbjct: 669 ELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLN 728
Query: 115 WLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFE 174
WLR+SW Q DTILADEMGLGKT+QT FLYSL+KEGH KGPFLVSAPLSTIINWEREFE
Sbjct: 729 WLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFE 788
Query: 175 TWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRG 209
WAPD YVVTYVGDKD R ++R+++ S+ED A RG
Sbjct: 789 MWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRG 823
>UNIPROTKB|J9NW81 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:ERMLLCR EMBL:AAEX03015287 Ensembl:ENSCAFT00000048002
Uniprot:J9NW81
Length = 1932
Score = 543 (196.2 bits), Expect = 7.6e-51, P = 7.6e-51
Identities = 102/155 (65%), Positives = 117/155 (75%)
Query: 60 ELQEDEDGASGSKP-----RRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGIN 114
EL E+G G K R+ PPE PT D KYE+QP +LD TG LH YQ+EG+N
Sbjct: 696 ELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLN 755
Query: 115 WLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFE 174
WLR+SW Q DTILADEMGLGKT+QT FLYSL+KEGH KGPFLVSAPLSTIINWEREFE
Sbjct: 756 WLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFE 815
Query: 175 TWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRG 209
WAPD YVVTYVGDKD R ++R+++ S+ED A RG
Sbjct: 816 MWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRG 850
>UNIPROTKB|F1N3F6 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:ERMLLCR EMBL:DAAA02014463 IPI:IPI00877578
Ensembl:ENSBTAT00000019612 ArrayExpress:F1N3F6 Uniprot:F1N3F6
Length = 1934
Score = 543 (196.2 bits), Expect = 7.6e-51, P = 7.6e-51
Identities = 102/155 (65%), Positives = 117/155 (75%)
Query: 60 ELQEDEDGASGSKP-----RRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGIN 114
EL E+G G K R+ PPE PT D KYE+QP +LD TG LH YQ+EG+N
Sbjct: 698 ELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLN 757
Query: 115 WLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFE 174
WLR+SW Q DTILADEMGLGKT+QT FLYSL+KEGH KGPFLVSAPLSTIINWEREFE
Sbjct: 758 WLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFE 817
Query: 175 TWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRG 209
WAPD YVVTYVGDKD R ++R+++ S+ED A RG
Sbjct: 818 MWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRG 852
>UNIPROTKB|F1LM59 [details] [associations]
symbol:Chd4 "Protein Chd4" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 RGD:620064 GO:GO:0005524 GO:GO:0005737 GO:GO:0005813
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
IPI:IPI00365698 PRIDE:F1LM59 Ensembl:ENSRNOT00000024864
ArrayExpress:F1LM59 Uniprot:F1LM59
Length = 1945
Score = 543 (196.2 bits), Expect = 7.7e-51, P = 7.7e-51
Identities = 102/155 (65%), Positives = 117/155 (75%)
Query: 60 ELQEDEDGASGSKP-----RRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGIN 114
EL E+G G K R+ PPE PT D KYE+QP +LD TG LH YQ+EG+N
Sbjct: 697 ELMRGEEGRPGKKLKKVKLRKLERPPETPTVDPTVKYERQPEYLDATGGTLHPYQMEGLN 756
Query: 115 WLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFE 174
WLR+SW Q DTILADEMGLGKT+QT FLYSL+KEGH KGPFLVSAPLSTIINWEREFE
Sbjct: 757 WLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFE 816
Query: 175 TWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRG 209
WAPD YVVTYVGDKD R ++R+++ S+ED A RG
Sbjct: 817 MWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRG 851
>UNIPROTKB|F1NH79 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:AADN02061139 EMBL:AADN02061140 EMBL:AADN02061141
EMBL:AADN02061142 EMBL:AADN02061143 IPI:IPI00598956
Ensembl:ENSGALT00000023339 OMA:DGEHEHQ Uniprot:F1NH79
Length = 1895
Score = 539 (194.8 bits), Expect = 2.0e-50, P = 2.0e-50
Identities = 101/155 (65%), Positives = 117/155 (75%)
Query: 60 ELQEDEDGASGSK-----PRRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGIN 114
EL E+G G K R+ PPE PT D KY++QP +LD TG LH YQLEG+N
Sbjct: 646 ELMRGEEGRPGKKLKKVKMRKLERPPETPTVDPTVKYDRQPEYLDVTGGTLHPYQLEGLN 705
Query: 115 WLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFE 174
WLR+SW Q DTILADEMGLGKT+QT FLYSL+KEGH KGPFLVSAPLSTIINWEREFE
Sbjct: 706 WLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFE 765
Query: 175 TWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRG 209
WAPD YVVTYVGDKD R ++R+++ ++ED A RG
Sbjct: 766 MWAPDMYVVTYVGDKDSRAIIRENEFTFEDNAIRG 800
>ZFIN|ZDB-GENE-041111-187 [details] [associations]
symbol:chd4a "chromodomain helicase DNA binding
protein 4a" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-041111-187
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:BX004850
IPI:IPI00962864 Ensembl:ENSDART00000005453 ArrayExpress:F1QWV5
Bgee:F1QWV5 Uniprot:F1QWV5
Length = 1930
Score = 527 (190.6 bits), Expect = 3.8e-49, P = 3.8e-49
Identities = 100/156 (64%), Positives = 116/156 (74%)
Query: 60 ELQEDEDGASGSK------PRRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGI 113
EL ++G G K R+ PPE P D K+E+QP +LD TG LH YQLEG+
Sbjct: 659 ELMMGDEGKPGKKIKIKGKMRKLDRPPENPVVDPTIKFERQPDYLDTTGGTLHPYQLEGL 718
Query: 114 NWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREF 173
NWLR+SW Q DTILADEMGLGKT+QT FLYSL+KEGH KGPFLVSAPLSTIINWEREF
Sbjct: 719 NWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREF 778
Query: 174 ETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRG 209
E WAPD YVVTYVGDKD R V+R+++ S+E+ A RG
Sbjct: 779 EMWAPDMYVVTYVGDKDSRAVIRENEFSFENNAIRG 814
>ZFIN|ZDB-GENE-030131-4532 [details] [associations]
symbol:chd4b "chromodomain helicase DNA binding
protein 4b" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-030131-4532
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:BX511250
IPI:IPI00931161 RefSeq:XP_685699.4 UniGene:Dr.75373
Ensembl:ENSDART00000092902 Ensembl:ENSDART00000148389 GeneID:560622
KEGG:dre:560622 CTD:560622 NextBio:20883532 Uniprot:F1RBT2
Length = 1953
Score = 524 (189.5 bits), Expect = 8.2e-49, P = 8.2e-49
Identities = 100/155 (64%), Positives = 116/155 (74%)
Query: 60 ELQEDEDGASGSKPR----RYTP-PPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGIN 114
EL E+G G K + R T PP P D K+++QP +LD TG LH YQLEG+N
Sbjct: 686 ELMLGEEGRPGKKMKKVKVRKTERPPANPVVDPTIKFDRQPDYLDSTGGTLHPYQLEGLN 745
Query: 115 WLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFE 174
WLR+SW Q DTILADEMGLGKT+QT FLYSL+KEGH KGPFLVSAPLSTIINWEREFE
Sbjct: 746 WLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFE 805
Query: 175 TWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANRG 209
WAPD YVVTYVGDKD R V+R+++ ++ED A RG
Sbjct: 806 MWAPDMYVVTYVGDKDSRAVIRENEFTFEDNAIRG 840
>RGD|1582725 [details] [associations]
symbol:Chd5 "chromodomain helicase DNA binding protein 5"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1582725 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 OrthoDB:EOG4WH8JX
IPI:IPI00948282 Ensembl:ENSRNOT00000067364 UCSC:RGD:1582725
ArrayExpress:D4A5U0 Uniprot:D4A5U0
Length = 1940
Score = 517 (187.1 bits), Expect = 4.5e-48, P = 4.5e-48
Identities = 93/138 (67%), Positives = 110/138 (79%)
Query: 72 KPRRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADE 131
K + PP+ P D K++KQP ++D TG LH YQLEG+NWLR+SW Q DTILADE
Sbjct: 665 KDDKQEKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADE 724
Query: 132 MGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDC 191
MGLGKT+QTI FLYSL+KEGH KGP+LVSAPLSTIINWEREFE WAPDFYVVTY GDK+
Sbjct: 725 MGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKES 784
Query: 192 RIVLRDHDISWEDTANRG 209
R V+R+++ S+ED A RG
Sbjct: 785 RSVIRENEFSFEDNAIRG 802
>UNIPROTKB|K7EMY3 [details] [associations]
symbol:CHD5 "Chromodomain-helicase-DNA-binding protein 5"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AL031847 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:AL035406
HGNC:HGNC:16816 Ensembl:ENST00000462991 Uniprot:K7EMY3
Length = 1060
Score = 511 (184.9 bits), Expect = 5.8e-48, P = 5.8e-48
Identities = 94/141 (66%), Positives = 111/141 (78%)
Query: 70 GSKPR--RYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTI 127
G K R + PP+ P D K++KQP ++D TG LH YQLEG+NWLR+SW Q DTI
Sbjct: 46 GKKLRDDKQEKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTI 105
Query: 128 LADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVG 187
LADEMGLGKT+QTI FLYSL+KEGH KGP+LVSAPLSTIINWEREFE WAPDFYVVTY G
Sbjct: 106 LADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTG 165
Query: 188 DKDCRIVLRDHDISWEDTANR 208
DK+ R V+R+++ S+ED A R
Sbjct: 166 DKESRSVIRENEFSFEDNAIR 186
>UNIPROTKB|F1LPP7 [details] [associations]
symbol:Chd3 "Protein Chd3" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 IPI:IPI00369880
Ensembl:ENSRNOT00000057060 Uniprot:F1LPP7
Length = 2020
Score = 513 (185.6 bits), Expect = 6.3e-48, Sum P(2) = 6.3e-48
Identities = 93/131 (70%), Positives = 105/131 (80%)
Query: 79 PPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTI 138
PP PT D KYE QP F+ TG LH YQLEG+NWLR+SW Q DTILADEMGLGKTI
Sbjct: 761 PPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTI 820
Query: 139 QTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDH 198
QTI FLYSL+KEGH KGPFLVSAPLSTIINWEREF+ WAP FYVVTY GDKD R ++R++
Sbjct: 821 QTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIREN 880
Query: 199 DISWEDTANRG 209
+ S+ED A +G
Sbjct: 881 EFSFEDNAIKG 891
Score = 35 (17.4 bits), Expect = 6.3e-48, Sum P(2) = 6.3e-48
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 62 QEDEDGASGSKPR------RYTPP 79
+EDE+G G P R++PP
Sbjct: 40 EEDEEGVLGRGPGHDRGRDRHSPP 63
>UNIPROTKB|F1M7Q0 [details] [associations]
symbol:Chd3 "Protein Chd3" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR
IPI:IPI00959834 Ensembl:ENSRNOT00000012983 Uniprot:F1M7Q0
Length = 2054
Score = 513 (185.6 bits), Expect = 6.6e-48, Sum P(2) = 6.6e-48
Identities = 93/131 (70%), Positives = 105/131 (80%)
Query: 79 PPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTI 138
PP PT D KYE QP F+ TG LH YQLEG+NWLR+SW Q DTILADEMGLGKTI
Sbjct: 761 PPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTI 820
Query: 139 QTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDH 198
QTI FLYSL+KEGH KGPFLVSAPLSTIINWEREF+ WAP FYVVTY GDKD R ++R++
Sbjct: 821 QTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIREN 880
Query: 199 DISWEDTANRG 209
+ S+ED A +G
Sbjct: 881 EFSFEDNAIKG 891
Score = 35 (17.4 bits), Expect = 6.6e-48, Sum P(2) = 6.6e-48
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 62 QEDEDGASGSKPR------RYTPP 79
+EDE+G G P R++PP
Sbjct: 40 EEDEEGVLGRGPGHDRGRDRHSPP 63
>UNIPROTKB|J9NRN3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 EMBL:AAEX03003895
EMBL:AAEX03003896 EMBL:AAEX03003897 Ensembl:ENSCAFT00000044104
Uniprot:J9NRN3
Length = 1195
Score = 511 (184.9 bits), Expect = 7.9e-48, P = 7.9e-48
Identities = 92/137 (67%), Positives = 109/137 (79%)
Query: 72 KPRRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADE 131
K + PP+ P D K++KQP ++D TG LH YQLEG+NWLR+SW Q DTILADE
Sbjct: 641 KDDKQEKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADE 700
Query: 132 MGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDC 191
MGLGKT+QTI FLYSL+KEGH KGP+LVSAPLSTIINWEREFE WAPDFYVVTY GDK+
Sbjct: 701 MGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKES 760
Query: 192 RIVLRDHDISWEDTANR 208
R V+R+++ S+ED A R
Sbjct: 761 RSVIRENEFSFEDNAIR 777
>UNIPROTKB|F2Z2R5 [details] [associations]
symbol:CHD5 "Chromodomain-helicase-DNA-binding protein 5"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:AL031847
GO:GO:0008026 InterPro:IPR023780 EMBL:AL035406 HGNC:HGNC:16816
ChiTaRS:CHD5 IPI:IPI00444866 ProteinModelPortal:F2Z2R5 SMR:F2Z2R5
Ensembl:ENST00000496404 ArrayExpress:F2Z2R5 Bgee:F2Z2R5
Uniprot:F2Z2R5
Length = 1225
Score = 511 (184.9 bits), Expect = 8.3e-48, P = 8.3e-48
Identities = 94/141 (66%), Positives = 111/141 (78%)
Query: 70 GSKPR--RYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTI 127
G K R + PP+ P D K++KQP ++D TG LH YQLEG+NWLR+SW Q DTI
Sbjct: 663 GKKLRDDKQEKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTI 722
Query: 128 LADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVG 187
LADEMGLGKT+QTI FLYSL+KEGH KGP+LVSAPLSTIINWEREFE WAPDFYVVTY G
Sbjct: 723 LADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTG 782
Query: 188 DKDCRIVLRDHDISWEDTANR 208
DK+ R V+R+++ S+ED A R
Sbjct: 783 DKESRSVIRENEFSFEDNAIR 803
>RGD|1311923 [details] [associations]
symbol:Chd3 "chromodomain helicase DNA binding protein 3"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005813 "centrosome" evidence=ISO]
[GO:0006333 "chromatin assembly or disassembly" evidence=ISO]
[GO:0007051 "spindle organization" evidence=ISO] [GO:0016581 "NuRD
complex" evidence=ISO] [GO:0045111 "intermediate filament
cytoskeleton" evidence=ISO] [GO:0051297 "centrosome organization"
evidence=ISO] InterPro:IPR001841 InterPro:IPR009071
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326
IPI:IPI00369880 EMBL:AY903245 EMBL:AY903246 UniGene:Rn.232095
STRING:Q2KML1 UCSC:RGD:1311923 Genevestigator:Q2KML1 Uniprot:Q2KML1
Length = 1925
Score = 513 (185.6 bits), Expect = 1.2e-47, P = 1.2e-47
Identities = 93/131 (70%), Positives = 105/131 (80%)
Query: 79 PPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTI 138
PP PT D KYE QP F+ TG LH YQLEG+NWLR+SW Q DTILADEMGLGKTI
Sbjct: 666 PPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTI 725
Query: 139 QTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDH 198
QTI FLYSL+KEGH KGPFLVSAPLSTIINWEREF+ WAP FYVVTY GDKD R ++R++
Sbjct: 726 QTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIREN 785
Query: 199 DISWEDTANRG 209
+ S+ED A +G
Sbjct: 786 EFSFEDNAIKG 796
>UNIPROTKB|F1N544 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR EMBL:DAAA02048806
IPI:IPI00716282 Ensembl:ENSBTAT00000019119 ArrayExpress:F1N544
Uniprot:F1N544
Length = 1998
Score = 513 (185.6 bits), Expect = 1.3e-47, P = 1.3e-47
Identities = 93/131 (70%), Positives = 105/131 (80%)
Query: 79 PPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTI 138
PP PT D KYE QP F+ TG LH YQLEG+NWLR+SW Q DTILADEMGLGKTI
Sbjct: 706 PPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTI 765
Query: 139 QTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDH 198
QTI FLYSL+KEGH KGPFLVSAPLSTIINWEREF+ WAP FYVVTY GDKD R ++R++
Sbjct: 766 QTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIREN 825
Query: 199 DISWEDTANRG 209
+ S+ED A +G
Sbjct: 826 EFSFEDNAIKG 836
>UNIPROTKB|E2RTI2 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR EMBL:AAEX03003635
EMBL:AAEX03003636 Ensembl:ENSCAFT00000026729 Uniprot:E2RTI2
Length = 1998
Score = 513 (185.6 bits), Expect = 1.3e-47, P = 1.3e-47
Identities = 93/131 (70%), Positives = 105/131 (80%)
Query: 79 PPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTI 138
PP PT D KYE QP F+ TG LH YQLEG+NWLR+SW Q DTILADEMGLGKTI
Sbjct: 708 PPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTI 767
Query: 139 QTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDH 198
QTI FLYSL+KEGH KGPFLVSAPLSTIINWEREF+ WAP FYVVTY GDKD R ++R++
Sbjct: 768 QTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIREN 827
Query: 199 DISWEDTANRG 209
+ S+ED A +G
Sbjct: 828 EFSFEDNAIKG 838
>UNIPROTKB|Q12873 [details] [associations]
symbol:CHD3 "Chromodomain-helicase-DNA-binding protein 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0004386 "helicase activity" evidence=NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0008270
"zinc ion binding" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007051 "spindle organization" evidence=IDA]
[GO:0005813 "centrosome" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0051297 "centrosome organization" evidence=IDA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=TAS] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=TAS] [GO:0016581 "NuRD complex" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0045111 "intermediate
filament cytoskeleton" evidence=IDA] InterPro:IPR001841
InterPro:IPR009071 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005737 GO:GO:0005813
EMBL:CH471108 GO:GO:0005730 GO:GO:0051297 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006357 GO:GO:0006351
GO:GO:0016568 Gene3D:1.10.30.10 GO:GO:0045111 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004003
InterPro:IPR019786 PROSITE:PS01359
Pathway_Interaction_DB:hdac_classi_pathway InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0007051 GO:GO:0016581 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 HOGENOM:HOG000231124
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1107 EMBL:U91543 EMBL:AF006515 EMBL:U08379 IPI:IPI00373870
IPI:IPI00411592 RefSeq:NP_001005271.2 RefSeq:NP_001005273.1
RefSeq:NP_005843.2 UniGene:Hs.25601 ProteinModelPortal:Q12873
SMR:Q12873 DIP:DIP-32496N IntAct:Q12873 MINT:MINT-1185641
STRING:Q12873 PhosphoSite:Q12873 DMDM:88911273 PaxDb:Q12873
PRIDE:Q12873 Ensembl:ENST00000330494 Ensembl:ENST00000358181
GeneID:1107 KEGG:hsa:1107 UCSC:uc002gje.2 UCSC:uc002gjf.2
GeneCards:GC17P007788 H-InvDB:HIX0013516 HGNC:HGNC:1918
HPA:HPA043368 MIM:602120 neXtProt:NX_Q12873 PharmGKB:PA26454
HOVERGEN:HBG005326 KO:K11642 PhylomeDB:Q12873 ChiTaRS:CHD3
GenomeRNAi:1107 NextBio:4590 ArrayExpress:Q12873 Bgee:Q12873
CleanEx:HS_CHD3 Genevestigator:Q12873 GermOnline:ENSG00000170004
Uniprot:Q12873
Length = 2000
Score = 513 (185.6 bits), Expect = 1.3e-47, P = 1.3e-47
Identities = 93/131 (70%), Positives = 105/131 (80%)
Query: 79 PPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTI 138
PP PT D KYE QP F+ TG LH YQLEG+NWLR+SW Q DTILADEMGLGKTI
Sbjct: 710 PPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTI 769
Query: 139 QTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDH 198
QTI FLYSL+KEGH KGPFLVSAPLSTIINWEREF+ WAP FYVVTY GDKD R ++R++
Sbjct: 770 QTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIREN 829
Query: 199 DISWEDTANRG 209
+ S+ED A +G
Sbjct: 830 EFSFEDNAIKG 840
>UNIPROTKB|F1ST12 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 CTD:1107 KO:K11642 OMA:EPEPGYR
EMBL:CU972380 RefSeq:XP_003132000.1 UniGene:Ssc.1663
Ensembl:ENSSSCT00000019548 GeneID:100188906 KEGG:ssc:100188906
Uniprot:F1ST12
Length = 2002
Score = 513 (185.6 bits), Expect = 1.3e-47, P = 1.3e-47
Identities = 93/131 (70%), Positives = 105/131 (80%)
Query: 79 PPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTI 138
PP PT D KYE QP F+ TG LH YQLEG+NWLR+SW Q DTILADEMGLGKTI
Sbjct: 710 PPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTI 769
Query: 139 QTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDH 198
QTI FLYSL+KEGH KGPFLVSAPLSTIINWEREF+ WAP FYVVTY GDKD R ++R++
Sbjct: 770 QTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIREN 829
Query: 199 DISWEDTANRG 209
+ S+ED A +G
Sbjct: 830 EFSFEDNAIKG 840
>UNIPROTKB|E9PG89 [details] [associations]
symbol:CHD3 "Chromodomain-helicase-DNA-binding protein 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0006333 "chromatin assembly or
disassembly" evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IDA] InterPro:IPR001841 InterPro:IPR009071
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005730 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.30.10 GO:GO:0045111
GO:GO:0006333 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1107 RefSeq:NP_001005271.2 UniGene:Hs.25601 GeneID:1107
KEGG:hsa:1107 HGNC:HGNC:1918 KO:K11642 ChiTaRS:CHD3 GenomeRNAi:1107
NextBio:4590 EMBL:AC104581 IPI:IPI00465222
ProteinModelPortal:E9PG89 SMR:E9PG89 PRIDE:E9PG89
Ensembl:ENST00000380358 UCSC:uc002gjd.2 OMA:EPEPGYR
ArrayExpress:E9PG89 Bgee:E9PG89 Uniprot:E9PG89
Length = 2059
Score = 513 (185.6 bits), Expect = 1.3e-47, P = 1.3e-47
Identities = 93/131 (70%), Positives = 105/131 (80%)
Query: 79 PPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTI 138
PP PT D KYE QP F+ TG LH YQLEG+NWLR+SW Q DTILADEMGLGKTI
Sbjct: 769 PPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRFSWAQGTDTILADEMGLGKTI 828
Query: 139 QTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDH 198
QTI FLYSL+KEGH KGPFLVSAPLSTIINWEREF+ WAP FYVVTY GDKD R ++R++
Sbjct: 829 QTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAPKFYVVTYTGDKDSRAIIREN 888
Query: 199 DISWEDTANRG 209
+ S+ED A +G
Sbjct: 889 EFSFEDNAIKG 899
>UNIPROTKB|F1SSZ2 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:FP102454 Ensembl:ENSSSCT00000019561 Uniprot:F1SSZ2
Length = 1667
Score = 511 (184.9 bits), Expect = 1.5e-47, P = 1.5e-47
Identities = 94/141 (66%), Positives = 111/141 (78%)
Query: 70 GSKPR--RYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTI 127
G K R + PP+ P D K++KQP ++D TG LH YQLEG+NWLR+SW Q DTI
Sbjct: 579 GKKLRDDKQEKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTI 638
Query: 128 LADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVG 187
LADEMGLGKT+QTI FLYSL+KEGH KGP+LVSAPLSTIINWEREFE WAPDFYVVTY G
Sbjct: 639 LADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTG 698
Query: 188 DKDCRIVLRDHDISWEDTANR 208
DK+ R V+R+++ S+ED A R
Sbjct: 699 DKESRSVIRENEFSFEDNAIR 719
>UNIPROTKB|F1RIM3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:FP102454 Ensembl:ENSSSCT00000003736 Uniprot:F1RIM3
Length = 1723
Score = 511 (184.9 bits), Expect = 1.6e-47, P = 1.6e-47
Identities = 94/141 (66%), Positives = 111/141 (78%)
Query: 70 GSKPR--RYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTI 127
G K R + PP+ P D K++KQP ++D TG LH YQLEG+NWLR+SW Q DTI
Sbjct: 595 GKKLRDDKQEKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTI 654
Query: 128 LADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVG 187
LADEMGLGKT+QTI FLYSL+KEGH KGP+LVSAPLSTIINWEREFE WAPDFYVVTY G
Sbjct: 655 LADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTG 714
Query: 188 DKDCRIVLRDHDISWEDTANR 208
DK+ R V+R+++ S+ED A R
Sbjct: 715 DKESRSVIRENEFSFEDNAIR 735
>UNIPROTKB|E2R1M3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:AAEX03003895 EMBL:AAEX03003896 EMBL:AAEX03003897
Ensembl:ENSCAFT00000031086 Uniprot:E2R1M3
Length = 1812
Score = 511 (184.9 bits), Expect = 1.8e-47, P = 1.8e-47
Identities = 92/137 (67%), Positives = 109/137 (79%)
Query: 72 KPRRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADE 131
K + PP+ P D K++KQP ++D TG LH YQLEG+NWLR+SW Q DTILADE
Sbjct: 530 KDDKQEKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADE 589
Query: 132 MGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDC 191
MGLGKT+QTI FLYSL+KEGH KGP+LVSAPLSTIINWEREFE WAPDFYVVTY GDK+
Sbjct: 590 MGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKES 649
Query: 192 RIVLRDHDISWEDTANR 208
R V+R+++ S+ED A R
Sbjct: 650 RSVIRENEFSFEDNAIR 666
>UNIPROTKB|F1MFF9 [details] [associations]
symbol:Bt.62145 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:DAAA02043090 IPI:IPI00688794
Ensembl:ENSBTAT00000010688 Uniprot:F1MFF9
Length = 1852
Score = 511 (184.9 bits), Expect = 1.8e-47, P = 1.8e-47
Identities = 92/137 (67%), Positives = 109/137 (79%)
Query: 72 KPRRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADE 131
K + PP+ P D K++KQP ++D TG LH YQLEG+NWLR+SW Q DTILADE
Sbjct: 613 KDDKQEKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADE 672
Query: 132 MGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDC 191
MGLGKT+QTI FLYSL+KEGH KGP+LVSAPLSTIINWEREFE WAPDFYVVTY GDK+
Sbjct: 673 MGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKES 732
Query: 192 RIVLRDHDISWEDTANR 208
R V+R+++ S+ED A R
Sbjct: 733 RSVIRENEFSFEDNAIR 749
>UNIPROTKB|Q8TDI0 [details] [associations]
symbol:CHD5 "Chromodomain-helicase-DNA-binding protein 5"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
EMBL:AF425231 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:AL031847
GO:GO:0008026 InterPro:IPR023780 PROSITE:PS00598
HOGENOM:HOG000231124 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326 OrthoDB:EOG4WH8JX
EMBL:AL035406 EMBL:AL117491 EMBL:AB007913 IPI:IPI00152535
PIR:T17269 RefSeq:NP_056372.1 UniGene:Hs.522898
ProteinModelPortal:Q8TDI0 SMR:Q8TDI0 IntAct:Q8TDI0 STRING:Q8TDI0
PhosphoSite:Q8TDI0 DMDM:51701343 PaxDb:Q8TDI0 PRIDE:Q8TDI0
DNASU:26038 Ensembl:ENST00000262450 GeneID:26038 KEGG:hsa:26038
UCSC:uc001amb.2 CTD:26038 GeneCards:GC01M006096 HGNC:HGNC:16816
HPA:HPA015809 MIM:610771 neXtProt:NX_Q8TDI0 PharmGKB:PA134969178
InParanoid:Q8TDI0 KO:K14435 OMA:KRIDDGD PhylomeDB:Q8TDI0
ChiTaRS:CHD5 GenomeRNAi:26038 NextBio:47863 ArrayExpress:Q8TDI0
Bgee:Q8TDI0 CleanEx:HS_CHD5 Genevestigator:Q8TDI0
GermOnline:ENSG00000116254 Uniprot:Q8TDI0
Length = 1954
Score = 511 (184.9 bits), Expect = 2.0e-47, P = 2.0e-47
Identities = 94/141 (66%), Positives = 111/141 (78%)
Query: 70 GSKPR--RYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTI 127
G K R + PP+ P D K++KQP ++D TG LH YQLEG+NWLR+SW Q DTI
Sbjct: 663 GKKLRDDKQEKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTI 722
Query: 128 LADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVG 187
LADEMGLGKT+QTI FLYSL+KEGH KGP+LVSAPLSTIINWEREFE WAPDFYVVTY G
Sbjct: 723 LADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTG 782
Query: 188 DKDCRIVLRDHDISWEDTANR 208
DK+ R V+R+++ S+ED A R
Sbjct: 783 DKESRSVIRENEFSFEDNAIR 803
>UNIPROTKB|F1NH78 [details] [associations]
symbol:F1NH78 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:AADN02040929 EMBL:AADN02040930 IPI:IPI00571784
Ensembl:ENSGALT00000023340 ArrayExpress:F1NH78 Uniprot:F1NH78
Length = 1781
Score = 505 (182.8 bits), Expect = 7.4e-47, P = 7.4e-47
Identities = 93/138 (67%), Positives = 109/138 (78%)
Query: 72 KPRRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADE 131
K + PPE P D K++KQP ++D TG LH YQLEG+NWLR+SW Q DTILADE
Sbjct: 598 KEEKLEKPPETPLVDPTVKFDKQPWYIDATGGTLHPYQLEGLNWLRFSWAQGTDTILADE 657
Query: 132 MGLGKTIQTITFLYSLFKE-GHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKD 190
MGLGKT+QTI FLYSL+KE GH KGP+LVSAPLSTIINWEREFE WAPDFYVVTY GDK+
Sbjct: 658 MGLGKTVQTIVFLYSLYKEQGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKE 717
Query: 191 CRIVLRDHDISWEDTANR 208
R V+R+++ S+ED A R
Sbjct: 718 SRSVIRENEFSFEDNAIR 735
>FB|FBgn0023395 [details] [associations]
symbol:Chd3 "Chd3" species:7227 "Drosophila melanogaster"
[GO:0006333 "chromatin assembly or disassembly" evidence=ISS;NAS]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0004386 "helicase
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 EMBL:AE014296 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0006333
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 PROSITE:PS00598 GeneTree:ENSGT00560000076896
InterPro:IPR009463 Pfam:PF06465 EMBL:AY071503 EMBL:AF007780
RefSeq:NP_649111.1 ProteinModelPortal:O16102 SMR:O16102
DIP:DIP-21327N MINT:MINT-1651376 STRING:O16102 PaxDb:O16102
EnsemblMetazoa:FBtr0074998 GeneID:40111 KEGG:dme:Dmel_CG9594
UCSC:CG9594-RA CTD:1107 FlyBase:FBgn0023395 InParanoid:O16102
OMA:IKWRDLA OrthoDB:EOG4JH9WN PhylomeDB:O16102 GenomeRNAi:40111
NextBio:817050 Bgee:O16102 GermOnline:CG9594 Uniprot:O16102
Length = 892
Score = 498 (180.4 bits), Expect = 8.1e-47, P = 8.1e-47
Identities = 89/140 (63%), Positives = 108/140 (77%)
Query: 69 SGSKPRRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTIL 128
S +K R+ P PT DL KKYE QP FL + G++LH +Q+EG++WLRYSWGQ I TIL
Sbjct: 233 SSNKGRQRDRPA--PTIDLNKKYEDQPVFLKEAGLKLHPFQIEGVSWLRYSWGQGIPTIL 290
Query: 129 ADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGD 188
ADEMGLGKTIQT+ FLYSLFKEGHC+GPFL+S PLST+ NWERE E WAP+ Y VTYVG
Sbjct: 291 ADEMGLGKTIQTVVFLYSLFKEGHCRGPFLISVPLSTLTNWERELELWAPELYCVTYVGG 350
Query: 189 KDCRIVLRDHDISWEDTANR 208
K R V+R H+IS+E+ +
Sbjct: 351 KTARAVIRKHEISFEEVTTK 370
>WB|WBGene00002637 [details] [associations]
symbol:let-418 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0048557 "embryonic digestive tract
morphogenesis" evidence=IGI] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IDA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0008134 "transcription
factor binding" evidence=IPI] [GO:0016581 "NuRD complex"
evidence=ISS] [GO:0040027 "negative regulation of vulval
development" evidence=IMP] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0000122 GO:GO:0040035
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
GO:GO:0048557 HSSP:Q14839 EMBL:AF308445 EMBL:FO080294 PIR:T34239
RefSeq:NP_504523.1 UniGene:Cel.16862 ProteinModelPortal:G5EBZ4
SMR:G5EBZ4 IntAct:G5EBZ4 STRING:Q19815 EnsemblMetazoa:F26F12.7
GeneID:178970 KEGG:cel:CELE_F26F12.7 CTD:178970 WormBase:F26F12.7
OMA:VTQDATE NextBio:903342 Uniprot:G5EBZ4
Length = 1829
Score = 483 (175.1 bits), Expect = 1.7e-44, P = 1.7e-44
Identities = 88/142 (61%), Positives = 108/142 (76%)
Query: 68 ASGSKPRRYTPPPEK-PTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDT 126
A G P+ +K D+RKKYE QP ++ +TG +LH YQLEG+NWLR+ W D
Sbjct: 564 AKGLPPKEDEKKKKKREKIDIRKKYEVQPDYVTETGGKLHPYQLEGLNWLRHCWSNGTDA 623
Query: 127 ILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYV 186
ILADEMGLGKT+Q++TFLYSL KEGHCKGPFL++APLSTIINWERE E W PDFYVVTYV
Sbjct: 624 ILADEMGLGKTVQSLTFLYSLMKEGHCKGPFLIAAPLSTIINWEREAEQWCPDFYVVTYV 683
Query: 187 GDKDCRIVLRDHDISWEDTANR 208
G +D R+VLR+H+ S+ + A R
Sbjct: 684 GLRDARVVLREHEFSFVEGAVR 705
>UNIPROTKB|G5EBZ4 [details] [associations]
symbol:let-418 "Protein let-418" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0000122 GO:GO:0040035
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
GO:GO:0048557 HSSP:Q14839 EMBL:AF308445 EMBL:FO080294 PIR:T34239
RefSeq:NP_504523.1 UniGene:Cel.16862 ProteinModelPortal:G5EBZ4
SMR:G5EBZ4 IntAct:G5EBZ4 STRING:Q19815 EnsemblMetazoa:F26F12.7
GeneID:178970 KEGG:cel:CELE_F26F12.7 CTD:178970 WormBase:F26F12.7
OMA:VTQDATE NextBio:903342 Uniprot:G5EBZ4
Length = 1829
Score = 483 (175.1 bits), Expect = 1.7e-44, P = 1.7e-44
Identities = 88/142 (61%), Positives = 108/142 (76%)
Query: 68 ASGSKPRRYTPPPEK-PTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDT 126
A G P+ +K D+RKKYE QP ++ +TG +LH YQLEG+NWLR+ W D
Sbjct: 564 AKGLPPKEDEKKKKKREKIDIRKKYEVQPDYVTETGGKLHPYQLEGLNWLRHCWSNGTDA 623
Query: 127 ILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYV 186
ILADEMGLGKT+Q++TFLYSL KEGHCKGPFL++APLSTIINWERE E W PDFYVVTYV
Sbjct: 624 ILADEMGLGKTVQSLTFLYSLMKEGHCKGPFLIAAPLSTIINWEREAEQWCPDFYVVTYV 683
Query: 187 GDKDCRIVLRDHDISWEDTANR 208
G +D R+VLR+H+ S+ + A R
Sbjct: 684 GLRDARVVLREHEFSFVEGAVR 705
>WB|WBGene00000482 [details] [associations]
symbol:chd-3 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=TAS]
[GO:0040027 "negative regulation of vulval development"
evidence=IMP] [GO:0046580 "negative regulation of Ras protein
signal transduction" evidence=IMP] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0000118 "histone deacetylase
complex" evidence=ISS] [GO:0003682 "chromatin binding"
evidence=TAS] [GO:0003678 "DNA helicase activity" evidence=ISS]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003682 GO:GO:0006338
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0001709 GO:GO:0046580 GO:GO:0008026 InterPro:IPR023780
PROSITE:PS00598 GO:GO:0000118 GeneTree:ENSGT00560000076896
EMBL:AF308444 EMBL:Z67884 EMBL:Z67881 PIR:T20160 RefSeq:NP_510140.1
UniGene:Cel.16950 ProteinModelPortal:Q22516 SMR:Q22516
STRING:Q22516 PaxDb:Q22516 EnsemblMetazoa:T14G8.1 GeneID:181421
KEGG:cel:CELE_T14G8.1 UCSC:T14G8.1 CTD:181421 WormBase:T14G8.1
HOGENOM:HOG000231124 InParanoid:Q22516 OMA:INIIMEL NextBio:913870
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
Uniprot:Q22516
Length = 1787
Score = 478 (173.3 bits), Expect = 5.6e-44, P = 5.6e-44
Identities = 90/149 (60%), Positives = 109/149 (73%)
Query: 62 QEDEDGASGSKPRRYTPPPEK-PTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSW 120
Q + G G K T +K D+ KKYE QP F+ +TG LH YQLEGINWLR+ W
Sbjct: 573 QREAKGL-GPKEDEVTSRRKKREKIDILKKYEVQPDFISETGGNLHPYQLEGINWLRHCW 631
Query: 121 GQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDF 180
D ILADEMGLGKT+Q++TFLY+L KEGH KGPFL++APLSTIINWERE E W PDF
Sbjct: 632 SNGTDAILADEMGLGKTVQSLTFLYTLMKEGHTKGPFLIAAPLSTIINWEREAELWCPDF 691
Query: 181 YVVTYVGDKDCRIVLRDHDISWEDTANRG 209
YVVTYVGD++ R+V+R+H+ S+ D A RG
Sbjct: 692 YVVTYVGDRESRMVIREHEFSFVDGAVRG 720
>UNIPROTKB|Q22516 [details] [associations]
symbol:chd-3 "Chromodomain-helicase-DNA-binding protein 3
homolog" species:6239 "Caenorhabditis elegans" [GO:0032508 "DNA
duplex unwinding" evidence=ISS] InterPro:IPR001841
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003682 GO:GO:0006338 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0001709 GO:GO:0046580
GO:GO:0008026 InterPro:IPR023780 PROSITE:PS00598 GO:GO:0000118
GeneTree:ENSGT00560000076896 EMBL:AF308444 EMBL:Z67884 EMBL:Z67881
PIR:T20160 RefSeq:NP_510140.1 UniGene:Cel.16950
ProteinModelPortal:Q22516 SMR:Q22516 STRING:Q22516 PaxDb:Q22516
EnsemblMetazoa:T14G8.1 GeneID:181421 KEGG:cel:CELE_T14G8.1
UCSC:T14G8.1 CTD:181421 WormBase:T14G8.1 HOGENOM:HOG000231124
InParanoid:Q22516 OMA:INIIMEL NextBio:913870 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 Uniprot:Q22516
Length = 1787
Score = 478 (173.3 bits), Expect = 5.6e-44, P = 5.6e-44
Identities = 90/149 (60%), Positives = 109/149 (73%)
Query: 62 QEDEDGASGSKPRRYTPPPEK-PTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSW 120
Q + G G K T +K D+ KKYE QP F+ +TG LH YQLEGINWLR+ W
Sbjct: 573 QREAKGL-GPKEDEVTSRRKKREKIDILKKYEVQPDFISETGGNLHPYQLEGINWLRHCW 631
Query: 121 GQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDF 180
D ILADEMGLGKT+Q++TFLY+L KEGH KGPFL++APLSTIINWERE E W PDF
Sbjct: 632 SNGTDAILADEMGLGKTVQSLTFLYTLMKEGHTKGPFLIAAPLSTIINWEREAELWCPDF 691
Query: 181 YVVTYVGDKDCRIVLRDHDISWEDTANRG 209
YVVTYVGD++ R+V+R+H+ S+ D A RG
Sbjct: 692 YVVTYVGDRESRMVIREHEFSFVDGAVRG 720
>UNIPROTKB|E1C1A9 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
OMA:AHSWCKN EMBL:AADN02041467 EMBL:AADN02041468 EMBL:AADN02041469
EMBL:AADN02041470 IPI:IPI00575702 Ensembl:ENSGALT00000011260
Uniprot:E1C1A9
Length = 1727
Score = 321 (118.1 bits), Expect = 2.3e-29, Sum P(2) = 2.3e-29
Identities = 58/108 (53%), Positives = 78/108 (72%)
Query: 92 EKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEG 151
+KQP ++ ++L YQLEG+NWL +SW +N ILADEMGLGKTIQTI+FL LF +
Sbjct: 473 KKQPSYIGSENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQH 532
Query: 152 HCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHD 199
GPFLV PLST+ +W+REFE WAP+ VV Y+GD R ++R+++
Sbjct: 533 QLYGPFLVVVPLSTLTSWQREFEVWAPEINVVVYIGDLMSRNMIREYE 580
Score = 50 (22.7 bits), Expect = 2.3e-29, Sum P(2) = 2.3e-29
Identities = 15/41 (36%), Positives = 24/41 (58%)
Query: 63 EDEDGASGSKPRRYTPPP--EKPTT------DLRKKYEKQP 95
E E ++GSK ++ TPP EKP + D++K +E+ P
Sbjct: 60 ESESESTGSKSQQ-TPPETKEKPASKKERIADVKKMWEEYP 99
Score = 39 (18.8 bits), Expect = 3.2e-28, Sum P(2) = 3.2e-28
Identities = 6/16 (37%), Positives = 10/16 (62%)
Query: 62 QEDEDGASGSKPRRYT 77
++D+D G P+R T
Sbjct: 210 EDDDDDEDGETPKRQT 225
Score = 38 (18.4 bits), Expect = 4.1e-28, Sum P(2) = 4.1e-28
Identities = 7/21 (33%), Positives = 10/21 (47%)
Query: 62 QEDEDGASGSKPRRYTPPPEK 82
+EDEDG P P++
Sbjct: 154 EEDEDGGDQGTSAESEPEPKR 174
>TAIR|locus:2116747 [details] [associations]
symbol:PKR2 "PICKLE RELATED 2" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 EMBL:CP002687
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
IPI:IPI00523018 RefSeq:NP_194918.2 UniGene:At.54572
ProteinModelPortal:F4JTF6 SMR:F4JTF6 PRIDE:F4JTF6
EnsemblPlants:AT4G31900.1 GeneID:829320 KEGG:ath:AT4G31900
OMA:SYWESES ArrayExpress:F4JTF6 Uniprot:F4JTF6
Length = 1202
Score = 330 (121.2 bits), Expect = 1.8e-28, P = 1.8e-28
Identities = 72/145 (49%), Positives = 93/145 (64%)
Query: 60 ELQEDEDGASGSKPRRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYS 119
E+Q +D S S+ +Y E+ + K+++ P FL T LH YQLEG+N+LRYS
Sbjct: 185 EIQRFKDINSSSRRDKYVEN-ERNREEF-KQFDLTPEFLTGT---LHTYQLEGLNFLRYS 239
Query: 120 WGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPD 179
W + + ILADEMGLGKTIQ+I FL SLF+E P LV APLSTI NWEREF TWAP
Sbjct: 240 WSKKTNVILADEMGLGKTIQSIAFLASLFEEN--LSPHLVVAPLSTIRNWEREFATWAPH 297
Query: 180 FYVVTYVGDKDCRIVLRDHDISWED 204
VV Y GD + R V+ +H+ + +
Sbjct: 298 MNVVMYTGDSEARDVIWEHEFYFSE 322
>ZFIN|ZDB-GENE-050419-256 [details] [associations]
symbol:chd2 "chromodomain helicase DNA binding
protein 2" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-050419-256
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 EMBL:BX649578 IPI:IPI00999128
Ensembl:ENSDART00000127730 ArrayExpress:E7F7R2 Bgee:E7F7R2
Uniprot:E7F7R2
Length = 1813
Score = 323 (118.8 bits), Expect = 1.8e-27, P = 1.8e-27
Identities = 58/108 (53%), Positives = 78/108 (72%)
Query: 92 EKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEG 151
+KQP ++ D ++L YQL+G+NWL +SW + ILADEMGLGKTIQTI+FL LF +
Sbjct: 476 KKQPSYIGDENLELRDYQLDGVNWLAHSWCRCNSVILADEMGLGKTIQTISFLSYLFHQH 535
Query: 152 HCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHD 199
GPF+V PLST+ +W+REF+TWAPD VV Y+GD R +RD++
Sbjct: 536 QLYGPFIVVVPLSTLTSWQREFDTWAPDMNVVVYLGDVTSRKTIRDYE 583
>FB|FBgn0250786 [details] [associations]
symbol:Chd1 "Chromodomain-helicase-DNA-binding protein 1"
species:7227 "Drosophila melanogaster" [GO:0005705 "polytene
chromosome interband" evidence=IDA] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0005703 "polytene chromosome puff" evidence=IDA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0035042 "fertilization,
exchange of chromosomal proteins" evidence=IMP] [GO:0048477
"oogenesis" evidence=IMP] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IMP] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
EMBL:AE014134 GO:GO:0006355 GO:GO:0003677 GO:GO:0048477
GO:GO:0006351 GO:GO:0003682 GO:GO:0004386 GO:GO:0007476
InterPro:IPR016197 SUPFAM:SSF54160 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598 GO:GO:0005703
InterPro:IPR025260 Pfam:PF13907 EMBL:L77907 PIR:T13944
RefSeq:NP_477197.1 ProteinModelPortal:Q7KU24 SMR:Q7KU24
STRING:Q7KU24 PaxDb:Q7KU24 PRIDE:Q7KU24 EnsemblMetazoa:FBtr0077674
GeneID:33505 KEGG:dme:Dmel_CG3733 UCSC:CG3733-RA CTD:1105
FlyBase:FBgn0250786 GeneTree:ENSGT00560000076896 InParanoid:Q7KU24
KO:K11367 OrthoDB:EOG45MKM5 PhylomeDB:Q7KU24 ChiTaRS:CHD1
GenomeRNAi:33505 NextBio:783939 Bgee:Q7KU24 GO:GO:0005705
GO:GO:0035042 Uniprot:Q7KU24
Length = 1883
Score = 322 (118.4 bits), Expect = 2.4e-27, P = 2.4e-27
Identities = 61/116 (52%), Positives = 81/116 (69%)
Query: 90 KYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFK 149
+ + QP FL +G+ L YQ++G+NWL +SW + ILADEMGLGKTIQTI FLYSLFK
Sbjct: 514 RIKNQPEFLS-SGLTLRDYQMDGLNWLLHSWCKENSVILADEMGLGKTIQTICFLYSLFK 572
Query: 150 EGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDT 205
H GPFL PLST+ W+REF+ WAPD VVTY+GD R +++ ++ +E +
Sbjct: 573 IHHLYGPFLCVVPLSTMTAWQREFDLWAPDMNVVTYLGDIKSRELIQQYEWQFESS 628
>UNIPROTKB|O14647 [details] [associations]
symbol:CHD2 "Chromodomain-helicase-DNA-binding protein 2"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=TAS] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=TAS] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0006357 GO:GO:0004003 EMBL:CH471101
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 HOVERGEN:HBG005325
InterPro:IPR025260 Pfam:PF13907 KO:K11367 HOGENOM:HOG000207917
EMBL:AF006514 EMBL:BT007050 EMBL:FJ515838 EMBL:AC013394
EMBL:BC007347 EMBL:CR978407 IPI:IPI00023109 IPI:IPI00815893
RefSeq:NP_001036037.1 RefSeq:NP_001262.3 UniGene:Hs.220864
ProteinModelPortal:O14647 SMR:O14647 IntAct:O14647 STRING:O14647
PhosphoSite:O14647 PaxDb:O14647 PRIDE:O14647 DNASU:1106
Ensembl:ENST00000394196 Ensembl:ENST00000420239
Ensembl:ENST00000557381 GeneID:1106 KEGG:hsa:1106 UCSC:uc002bso.1
UCSC:uc002bsp.3 CTD:1106 GeneCards:GC15P093533 HGNC:HGNC:1917
MIM:602119 neXtProt:NX_O14647 PharmGKB:PA26453 InParanoid:O14647
OMA:AHSWCKN OrthoDB:EOG4QRH36 ChiTaRS:CHD2 GenomeRNAi:1106
NextBio:4584 ArrayExpress:O14647 Bgee:O14647 CleanEx:HS_CHD2
Genevestigator:O14647 GermOnline:ENSG00000173575 Uniprot:O14647
Length = 1828
Score = 319 (117.4 bits), Expect = 4.8e-27, P = 4.8e-27
Identities = 58/108 (53%), Positives = 77/108 (71%)
Query: 92 EKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEG 151
+KQP +L ++L YQLEG+NWL +SW +N ILADEMGLGKTIQTI+FL LF +
Sbjct: 471 KKQPAYLGGENLELRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQH 530
Query: 152 HCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHD 199
GPFL+ PLST+ +W+REFE WAP+ VV Y+GD R +R+++
Sbjct: 531 QLYGPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYE 578
>UNIPROTKB|I3LRQ2 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
GeneTree:ENSGT00560000076896 EMBL:CT954235 EMBL:CU466964
Ensembl:ENSSSCT00000027293 Uniprot:I3LRQ2
Length = 1051
Score = 314 (115.6 bits), Expect = 7.4e-27, P = 7.4e-27
Identities = 57/108 (52%), Positives = 77/108 (71%)
Query: 92 EKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEG 151
+KQP +L ++L YQLEG+NWL +SW ++ ILADEMGLGKTIQTI+FL LF +
Sbjct: 473 KKQPAYLGGENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQH 532
Query: 152 HCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHD 199
GPFL+ PLST+ +W+REFE WAP+ VV Y+GD R +R+++
Sbjct: 533 QLYGPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYE 580
>UNIPROTKB|J9NSS6 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
GeneTree:ENSGT00560000076896 EMBL:AAEX03002279 EMBL:AAEX03002280
Ensembl:ENSCAFT00000043290 Uniprot:J9NSS6
Length = 1379
Score = 314 (115.6 bits), Expect = 1.1e-26, P = 1.1e-26
Identities = 57/108 (52%), Positives = 77/108 (71%)
Query: 92 EKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEG 151
+KQP +L ++L YQLEG+NWL +SW ++ ILADEMGLGKTIQTI+FL LF +
Sbjct: 471 KKQPTYLGGENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQH 530
Query: 152 HCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHD 199
GPFL+ PLST+ +W+REFE WAP+ VV Y+GD R +R+++
Sbjct: 531 QLYGPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYE 578
>UNIPROTKB|J9NX79 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
EMBL:AAEX03002279 EMBL:AAEX03002280 Ensembl:ENSCAFT00000044612
Uniprot:J9NX79
Length = 1689
Score = 314 (115.6 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 57/108 (52%), Positives = 77/108 (71%)
Query: 92 EKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEG 151
+KQP +L ++L YQLEG+NWL +SW ++ ILADEMGLGKTIQTI+FL LF +
Sbjct: 440 KKQPTYLGGENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQH 499
Query: 152 HCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHD 199
GPFL+ PLST+ +W+REFE WAP+ VV Y+GD R +R+++
Sbjct: 500 QLYGPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYE 547
>UNIPROTKB|G3MXX3 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
OMA:AHSWCKN EMBL:DAAA02051958 Ensembl:ENSBTAT00000065179
Uniprot:G3MXX3
Length = 1810
Score = 314 (115.6 bits), Expect = 1.6e-26, P = 1.6e-26
Identities = 57/108 (52%), Positives = 77/108 (71%)
Query: 92 EKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEG 151
+KQP +L ++L YQLEG+NWL +SW ++ ILADEMGLGKTIQTI+FL LF +
Sbjct: 453 KKQPAYLGGENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQH 512
Query: 152 HCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHD 199
GPFL+ PLST+ +W+REFE WAP+ VV Y+GD R +R+++
Sbjct: 513 QLYGPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYE 560
>UNIPROTKB|E2R5Z7 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
EMBL:AAEX03002279 EMBL:AAEX03002280 Ensembl:ENSCAFT00000017614
NextBio:20854276 Uniprot:E2R5Z7
Length = 1831
Score = 314 (115.6 bits), Expect = 1.7e-26, P = 1.7e-26
Identities = 57/108 (52%), Positives = 77/108 (71%)
Query: 92 EKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEG 151
+KQP +L ++L YQLEG+NWL +SW ++ ILADEMGLGKTIQTI+FL LF +
Sbjct: 474 KKQPTYLGGENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQH 533
Query: 152 HCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHD 199
GPFL+ PLST+ +W+REFE WAP+ VV Y+GD R +R+++
Sbjct: 534 QLYGPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYE 581
>UNIPROTKB|F1SA77 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
OMA:AHSWCKN EMBL:CT954235 EMBL:CU466964 Ensembl:ENSSSCT00000002524
Uniprot:F1SA77
Length = 1831
Score = 314 (115.6 bits), Expect = 1.7e-26, P = 1.7e-26
Identities = 57/108 (52%), Positives = 77/108 (71%)
Query: 92 EKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEG 151
+KQP +L ++L YQLEG+NWL +SW ++ ILADEMGLGKTIQTI+FL LF +
Sbjct: 473 KKQPAYLGGENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQH 532
Query: 152 HCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHD 199
GPFL+ PLST+ +W+REFE WAP+ VV Y+GD R +R+++
Sbjct: 533 QLYGPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYE 580
>UNIPROTKB|J9PA90 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
OMA:AHSWCKN EMBL:AAEX03002279 EMBL:AAEX03002280
Ensembl:ENSCAFT00000045903 Uniprot:J9PA90
Length = 1840
Score = 314 (115.6 bits), Expect = 1.7e-26, P = 1.7e-26
Identities = 57/108 (52%), Positives = 77/108 (71%)
Query: 92 EKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEG 151
+KQP +L ++L YQLEG+NWL +SW ++ ILADEMGLGKTIQTI+FL LF +
Sbjct: 484 KKQPTYLGGENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQH 543
Query: 152 HCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHD 199
GPFL+ PLST+ +W+REFE WAP+ VV Y+GD R +R+++
Sbjct: 544 QLYGPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYE 591
>UNIPROTKB|D4AD08 [details] [associations]
symbol:Chd2 "Chromodomain helicase DNA binding protein 2
(Predicted)" species:10116 "Rattus norvegicus" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 EMBL:CH473980
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 KO:K11367 CTD:1106 OrthoDB:EOG4QRH36
IPI:IPI00778855 RefSeq:NP_001100993.1 UniGene:Rn.225034
Ensembl:ENSRNOT00000055829 GeneID:308738 KEGG:rno:308738
RGD:1310056 NextBio:659434 Uniprot:D4AD08
Length = 1834
Score = 313 (115.2 bits), Expect = 2.1e-26, P = 2.1e-26
Identities = 57/108 (52%), Positives = 77/108 (71%)
Query: 92 EKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEG 151
+KQP +L ++L YQLEG+NWL +SW ++ ILADEMGLGKTIQTI+FL LF +
Sbjct: 478 KKQPAYLGGENLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQH 537
Query: 152 HCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHD 199
GPFL+ PLST+ +W+REFE WAP+ VV Y+GD R +R+++
Sbjct: 538 QLYGPFLIVVPLSTLTSWQREFEIWAPEVNVVVYIGDLMSRNTIREYE 585
>UNIPROTKB|I3LQZ8 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
EMBL:CT954235 EMBL:CU466964 Ensembl:ENSSSCT00000025402
Uniprot:I3LQZ8
Length = 1709
Score = 308 (113.5 bits), Expect = 6.6e-26, P = 6.6e-26
Identities = 57/109 (52%), Positives = 77/109 (70%)
Query: 92 EKQPPFLDDTGMQLHAYQLEGINWLRYSW-GQNIDTILADEMGLGKTIQTITFLYSLFKE 150
+KQP +L ++L YQLEG+NWL +SW ++ ILADEMGLGKTIQTI+FL LF +
Sbjct: 459 KKQPAYLGGENLELRDYQLEGLNWLAHSWCNRSNSVILADEMGLGKTIQTISFLSYLFHQ 518
Query: 151 GHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHD 199
GPFL+ PLST+ +W+REFE WAP+ VV Y+GD R +R+++
Sbjct: 519 HQLYGPFLIVVPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYE 567
>UNIPROTKB|I3LB58 [details] [associations]
symbol:I3LB58 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 Pfam:PF00176 PROSITE:PS50013
SMART:SM00298 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 InterPro:IPR014001 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 EMBL:FP236283
Ensembl:ENSSSCT00000027570 OMA:REWIFEG Uniprot:I3LB58
Length = 226
Score = 291 (107.5 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 65/150 (43%), Positives = 89/150 (59%)
Query: 60 ELQEDEDGASGSKPRRYTPPPE-----KPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGIN 114
EL+ED D A + PE +P +D +K EK + + QL YQLEG+N
Sbjct: 79 ELEEDVDPAKVKEFESLQILPEIKHVERPASDSWQKLEKSREYKNSN--QLREYQLEGMN 136
Query: 115 WLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFE 174
WL ++W + ILADEMGLGKTIQ+ITFL +F G GPFL+ APLSTI NWEREF
Sbjct: 137 WLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFLRG-IHGPFLIIAPLSTITNWEREFR 195
Query: 175 TWAPDFYVVTYVGDKDCRIVLRDHDISWED 204
TW + + Y G + R +++ +++ + D
Sbjct: 196 TWT-EMNAIVYHGSQISRQMIQQYEMVYRD 224
>UNIPROTKB|H3BTW3 [details] [associations]
symbol:CHD9 "Chromodomain-helicase-DNA-binding protein 9"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00384 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780 EMBL:AC007906
EMBL:AC079416 HGNC:HGNC:25701 Ensembl:ENST00000565803 Bgee:H3BTW3
Uniprot:H3BTW3
Length = 1099
Score = 301 (111.0 bits), Expect = 1.9e-25, P = 1.9e-25
Identities = 64/146 (43%), Positives = 92/146 (63%)
Query: 63 EDEDGASGSKPRRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQ 122
E+ + S+P T ++P +++ KK ++ + + G QL YQLEG+NWL ++W
Sbjct: 348 EEFEQLQASRPD--TRRLDRPPSNIWKKIDQSRDYKN--GNQLREYQLEGLNWLLFNWYN 403
Query: 123 NIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYV 182
+ ILADEMGLGKTIQ+ITFLY + G +GPFL+ APLSTI NWEREF TW D V
Sbjct: 404 RRNCILADEMGLGKTIQSITFLYEILLTG-IRGPFLIIAPLSTIANWEREFRTWT-DINV 461
Query: 183 VTYVGDKDCRIVLRDHDISWEDTANR 208
V Y G R +++ +++ + D+ R
Sbjct: 462 VVYHGSLISRQMIQQYEMYFRDSQGR 487
>TAIR|locus:2040184 [details] [associations]
symbol:PKL "PICKLE" species:3702 "Arabidopsis thaliana"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003678 "DNA helicase activity" evidence=ISS] [GO:0016568
"chromatin modification" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0009736 "cytokinin
mediated signaling pathway" evidence=IMP] [GO:0009733 "response to
auxin stimulus" evidence=IMP] [GO:2000023 "regulation of lateral
root development" evidence=IMP] [GO:0009788 "negative regulation of
abscisic acid mediated signaling pathway" evidence=IMP] [GO:0006346
"methylation-dependent chromatin silencing" evidence=RCA]
[GO:0016246 "RNA interference" evidence=RCA] [GO:0008283 "cell
proliferation" evidence=IMP] [GO:0009739 "response to gibberellin
stimulus" evidence=IMP] [GO:0048364 "root development"
evidence=IMP] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 Prosite:PS00518 GO:GO:0005524 GO:GO:0005634
GO:GO:0045892 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009733
GO:GO:0046872 GO:GO:0003677 GO:GO:0008283 GO:GO:0008270
GO:GO:0016568 GO:GO:0048364 GO:GO:0009739 GO:GO:0009788
GO:GO:0009736 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
PROSITE:PS00598 HOGENOM:HOG000231124 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
EMBL:AF185578 EMBL:AF185577 EMBL:AK229409 IPI:IPI00521160
PIR:T52301 RefSeq:NP_565587.1 UniGene:At.11745
ProteinModelPortal:Q9S775 SMR:Q9S775 STRING:Q9S775 PaxDb:Q9S775
PRIDE:Q9S775 EnsemblPlants:AT2G25170.1 GeneID:817055
KEGG:ath:AT2G25170 TAIR:At2g25170 InParanoid:Q9S775 OMA:NVVMYFG
PhylomeDB:Q9S775 ProtClustDB:CLSN2688404 Genevestigator:Q9S775
GermOnline:AT2G25170 GO:GO:2000023 Uniprot:Q9S775
Length = 1384
Score = 301 (111.0 bits), Expect = 2.7e-25, P = 2.7e-25
Identities = 68/140 (48%), Positives = 86/140 (61%)
Query: 60 ELQEDEDGASGSKPRRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYS 119
E+Q +D S+ RR K ++++ P FL G+ LH YQLEG+N+LR+S
Sbjct: 233 EIQRFKD--VNSRTRRSKDVDHKRNPRDFQQFDHTPEFLK--GL-LHPYQLEGLNFLRFS 287
Query: 120 WGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPD 179
W + ILADEMGLGKTIQ+I L SLF+E P LV APLST+ NWEREF TWAP
Sbjct: 288 WSKQTHVILADEMGLGKTIQSIALLASLFEENLI--PHLVIAPLSTLRNWEREFATWAPQ 345
Query: 180 FYVVTYVGDKDCRIVLRDHD 199
VV Y G R V+R+H+
Sbjct: 346 MNVVMYFGTAQARAVIREHE 365
>UNIPROTKB|H7C294 [details] [associations]
symbol:CHD6 "Chromodomain-helicase-DNA-binding protein 6"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953 Pfam:PF00176
PROSITE:PS50013 SMART:SM00298 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
EMBL:AL121674 EMBL:AL031669 EMBL:AL031667 HGNC:HGNC:19057
ChiTaRS:CHD6 ProteinModelPortal:H7C294 Ensembl:ENST00000440697
Uniprot:H7C294
Length = 525
Score = 292 (107.8 bits), Expect = 3.3e-25, P = 3.3e-25
Identities = 65/150 (43%), Positives = 89/150 (59%)
Query: 60 ELQEDEDGASGSKPRRYTPPPE-----KPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGIN 114
EL+ED D A + PE +P +D +K EK + + QL YQLEG+N
Sbjct: 116 ELEEDVDPAKVKEFESLQVLPEIKHVERPASDSWQKLEKSREYKNSN--QLREYQLEGMN 173
Query: 115 WLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFE 174
WL ++W + ILADEMGLGKTIQ+ITFL +F G GPFL+ APLSTI NWEREF
Sbjct: 174 WLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFLRG-IHGPFLIIAPLSTITNWEREFR 232
Query: 175 TWAPDFYVVTYVGDKDCRIVLRDHDISWED 204
TW + + Y G + R +++ +++ + D
Sbjct: 233 TWT-EMNAIVYHGSQISRQMIQQYEMVYRD 261
>MGI|MGI:1924001 [details] [associations]
symbol:Chd9 "chromodomain helicase DNA binding protein 9"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016817 "hydrolase activity, acting on
acid anhydrides" evidence=IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00592
MGI:MGI:1924001 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
GO:GO:0016568 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 PROSITE:PS00598 HOVERGEN:HBG081150
HOGENOM:HOG000246942 GeneTree:ENSGT00560000077077 CTD:80205
KO:K14438 OMA:MWGHQTA EMBL:DQ127229 EMBL:AK034446 EMBL:AK039562
EMBL:AK084000 EMBL:AB093226 EMBL:BC052896 IPI:IPI00229650
IPI:IPI00758139 RefSeq:NP_796198.1 UniGene:Mm.100615
ProteinModelPortal:Q8BYH8 SMR:Q8BYH8 STRING:Q8BYH8
PhosphoSite:Q8BYH8 PaxDb:Q8BYH8 PRIDE:Q8BYH8
Ensembl:ENSMUST00000048665 Ensembl:ENSMUST00000109614 GeneID:109151
KEGG:mmu:109151 UCSC:uc009msf.2 UCSC:uc009msi.2 InParanoid:Q8BYH8
OrthoDB:EOG4548XQ ChiTaRS:CHD9 NextBio:361700 Bgee:Q8BYH8
CleanEx:MM_CHD9 Genevestigator:Q8BYH8 Uniprot:Q8BYH8
Length = 2885
Score = 304 (112.1 bits), Expect = 3.3e-25, P = 3.3e-25
Identities = 65/146 (44%), Positives = 92/146 (63%)
Query: 63 EDEDGASGSKPRRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQ 122
E+ + S+P T ++P +++ KK E+ + + G QL YQLEG+NWL ++W
Sbjct: 821 EEFEQLQASRPD--TRHLDRPPSNIWKKIEQSREYKN--GNQLREYQLEGLNWLLFNWYN 876
Query: 123 NIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYV 182
+ ILADEMGLGKTIQ+ITFLY + G +GPFL+ APLSTI NWEREF TW D V
Sbjct: 877 RRNCILADEMGLGKTIQSITFLYEILLTG-IRGPFLIIAPLSTIANWEREFRTWT-DINV 934
Query: 183 VTYVGDKDCRIVLRDHDISWEDTANR 208
V Y G R +++ +++ + D+ R
Sbjct: 935 VVYHGSLISRQMIQQYEMYFRDSQGR 960
>FB|FBgn0086902 [details] [associations]
symbol:kis "kismet" species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS;IDA] [GO:0007379 "segment
specification" evidence=IMP] [GO:0007350 "blastoderm segmentation"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0019730 "antimicrobial humoral
response" evidence=IMP] [GO:0007298 "border follicle cell
migration" evidence=IMP] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0007411 "axon guidance" evidence=IMP]
[GO:0016322 "neuron remodeling" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0007614 "short-term memory"
evidence=IMP] [GO:0046622 "positive regulation of organ growth"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0007476 "imaginal disc-derived
wing morphogenesis" evidence=IMP] [GO:0007031 "peroxisome
organization" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0007411 GO:GO:0045892 GO:GO:0005875
EMBL:AE014134 GO:GO:0003677 GO:GO:0006200 GO:GO:0016322
GO:GO:0007031 GO:GO:0016887 GO:GO:0007298 GO:GO:0007614
GO:GO:0004386 GO:GO:0007379 GO:GO:0046622 GO:GO:0007476
GO:GO:0019730 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0007350 InterPro:IPR023780
KO:K14437 GeneTree:ENSGT00560000077077 RefSeq:NP_001137761.1
UniGene:Dm.3182 ProteinModelPortal:B7Z002 SMR:B7Z002 STRING:B7Z002
EnsemblMetazoa:FBtr0299837 GeneID:33185 KEGG:dme:Dmel_CG3696
CTD:33185 FlyBase:FBgn0086902 OMA:TTFEMIV OrthoDB:EOG4BZKHC
PhylomeDB:B7Z002 GenomeRNAi:33185 NextBio:782323 Bgee:B7Z002
Uniprot:B7Z002
Length = 5517
Score = 305 (112.4 bits), Expect = 5.4e-25, P = 5.4e-25
Identities = 67/157 (42%), Positives = 97/157 (61%)
Query: 60 ELQEDEDGASGSKPRRYTPPPEK--------PTTDLRKKYEKQPPFLDDTGMQLHAYQLE 111
EL+ED D + R+ P++ P +L KK EK P + G L YQLE
Sbjct: 1978 ELEEDVDNDKIEQYLRFNKIPQRSEWKSKKRPHPELWKKLEKTPVYKG--GNSLRPYQLE 2035
Query: 112 GINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWER 171
G+NWL++SW + ILADEMGLGKTIQ++TF++S+++ G +GPFLV APLSTI NW+R
Sbjct: 2036 GLNWLKFSWYNTHNCILADEMGLGKTIQSLTFVHSVYEYG-IRGPFLVIAPLSTIPNWQR 2094
Query: 172 EFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANR 208
EFE W D VV Y G + +++D++ ++ + +
Sbjct: 2095 EFEGWT-DMNVVVYHGSVTSKQMIQDYEYYYKTESGK 2130
>UNIPROTKB|E1BS48 [details] [associations]
symbol:CHD9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 OMA:MWGHQTA EMBL:AADN02038292
EMBL:AADN02038293 EMBL:AADN02038294 EMBL:AADN02038295
EMBL:AADN02038296 EMBL:AADN02038297 EMBL:AADN02038298
IPI:IPI00579055 Ensembl:ENSGALT00000005902 Uniprot:E1BS48
Length = 2614
Score = 301 (111.0 bits), Expect = 6.2e-25, P = 6.2e-25
Identities = 73/159 (45%), Positives = 94/159 (59%)
Query: 60 ELQEDEDGAS--------GSKP--RRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQ 109
EL+ED D A S+P RR PP P + KK E + + G QL YQ
Sbjct: 808 ELKEDVDQAKIEEFEQLQASRPDSRRLDRPP--PNS--WKKIEHSREYKN--GNQLREYQ 861
Query: 110 LEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINW 169
LEG+NWL ++W + ILADEMGLGKTIQ+ITFLY + G +GPFL+ APLSTI NW
Sbjct: 862 LEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFLYEILLSG-IRGPFLIIAPLSTITNW 920
Query: 170 EREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANR 208
EREF TW D VV Y G R +++ +++ + D+ R
Sbjct: 921 EREFRTWT-DLNVVVYHGSMISRQMIQQYEMYFRDSQGR 958
>RGD|1594200 [details] [associations]
symbol:LOC680231 "similar to chromodomain helicase DNA binding
protein 9" species:10116 "Rattus norvegicus" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 RGD:1594200 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 OrthoDB:EOG4548XQ IPI:IPI00957597
Ensembl:ENSRNOT00000018201 Uniprot:D3ZVE2
Length = 2881
Score = 301 (111.0 bits), Expect = 6.9e-25, P = 6.9e-25
Identities = 64/146 (43%), Positives = 92/146 (63%)
Query: 63 EDEDGASGSKPRRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQ 122
E+ + S+P T ++P +++ KK ++ + + G QL YQLEG+NWL ++W
Sbjct: 821 EEFEQLQASRPD--TRQLDRPPSNIWKKIDQSREYKN--GNQLREYQLEGLNWLLFNWYN 876
Query: 123 NIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYV 182
+ ILADEMGLGKTIQ+ITFLY + G +GPFL+ APLSTI NWEREF TW D V
Sbjct: 877 RRNCILADEMGLGKTIQSITFLYEVLLTG-IRGPFLIIAPLSTIANWEREFRTWT-DINV 934
Query: 183 VTYVGDKDCRIVLRDHDISWEDTANR 208
V Y G R +++ +++ + D+ R
Sbjct: 935 VVYHGSLISRQMIQQYEMYFRDSQGR 960
>UNIPROTKB|Q3L8U1 [details] [associations]
symbol:CHD9 "Chromodomain-helicase-DNA-binding protein 9"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0044255 "cellular lipid metabolic
process" evidence=TAS] [GO:0044281 "small molecule metabolic
process" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
Reactome:REACT_111217 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005654 GO:GO:0006355 GO:GO:0044281
GO:GO:0003677 GO:GO:0044255 GO:GO:0006351 GO:GO:0016568
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
PROSITE:PS00598 HOVERGEN:HBG081150 EMBL:AY243500 EMBL:DQ333316
EMBL:AY647157 EMBL:AC007906 EMBL:AC079416 EMBL:BC140815
EMBL:AB002306 EMBL:AF150735 EMBL:AK022582 IPI:IPI00383105
IPI:IPI00746795 IPI:IPI00914955 RefSeq:NP_079410.4 UniGene:Hs.59159
UniGene:Hs.622347 ProteinModelPortal:Q3L8U1 SMR:Q3L8U1
IntAct:Q3L8U1 STRING:Q3L8U1 PhosphoSite:Q3L8U1 DMDM:215273951
PaxDb:Q3L8U1 PRIDE:Q3L8U1 Ensembl:ENST00000398510
Ensembl:ENST00000447540 Ensembl:ENST00000564845
Ensembl:ENST00000566029 GeneID:80205 KEGG:hsa:80205 UCSC:uc002egy.3
UCSC:uc002ehb.3 UCSC:uc002ehc.3 CTD:80205 GeneCards:GC16P053041
HGNC:HGNC:25701 neXtProt:NX_Q3L8U1 PharmGKB:PA128394727
InParanoid:Q3L8U1 KO:K14438 OMA:MWGHQTA GenomeRNAi:80205
NextBio:70576 ArrayExpress:Q3L8U1 Bgee:Q3L8U1 CleanEx:HS_CHD9
Genevestigator:Q3L8U1 GermOnline:ENSG00000177200 Uniprot:Q3L8U1
Length = 2897
Score = 301 (111.0 bits), Expect = 7.0e-25, P = 7.0e-25
Identities = 64/146 (43%), Positives = 92/146 (63%)
Query: 63 EDEDGASGSKPRRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQ 122
E+ + S+P T ++P +++ KK ++ + + G QL YQLEG+NWL ++W
Sbjct: 822 EEFEQLQASRPD--TRRLDRPPSNIWKKIDQSRDYKN--GNQLREYQLEGLNWLLFNWYN 877
Query: 123 NIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYV 182
+ ILADEMGLGKTIQ+ITFLY + G +GPFL+ APLSTI NWEREF TW D V
Sbjct: 878 RRNCILADEMGLGKTIQSITFLYEILLTG-IRGPFLIIAPLSTIANWEREFRTWT-DINV 935
Query: 183 VTYVGDKDCRIVLRDHDISWEDTANR 208
V Y G R +++ +++ + D+ R
Sbjct: 936 VVYHGSLISRQMIQQYEMYFRDSQGR 961
>UNIPROTKB|E2RDK8 [details] [associations]
symbol:CHD9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 OMA:MWGHQTA EMBL:AAEX03001603
EMBL:AAEX03001604 EMBL:AAEX03001605 Ensembl:ENSCAFT00000015413
Uniprot:E2RDK8
Length = 2902
Score = 300 (110.7 bits), Expect = 8.9e-25, P = 8.9e-25
Identities = 64/146 (43%), Positives = 91/146 (62%)
Query: 63 EDEDGASGSKPRRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQ 122
E+ + S+P T ++P ++ KK ++ + + G QL YQLEG+NWL ++W
Sbjct: 824 EEFEHLQASRPD--TRHLDRPPANIWKKIDQSRDYKN--GNQLREYQLEGLNWLLFNWYN 879
Query: 123 NIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYV 182
+ ILADEMGLGKTIQ+ITFLY + G +GPFL+ APLSTI NWEREF TW D V
Sbjct: 880 RRNCILADEMGLGKTIQSITFLYEILLTG-IRGPFLIIAPLSTIANWEREFRTWT-DINV 937
Query: 183 VTYVGDKDCRIVLRDHDISWEDTANR 208
V Y G R +++ +++ + D+ R
Sbjct: 938 VVYHGSLISRQMIQQYEMYFRDSQGR 963
>UNIPROTKB|F1NVT7 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 GeneTree:ENSGT00560000077077 EMBL:AADN02019534
EMBL:AADN02019532 EMBL:AADN02019533 IPI:IPI00818616
Ensembl:ENSGALT00000040615 ArrayExpress:F1NVT7 Uniprot:F1NVT7
Length = 1257
Score = 295 (108.9 bits), Expect = 1.0e-24, P = 1.0e-24
Identities = 65/151 (43%), Positives = 90/151 (59%)
Query: 60 ELQEDEDGASGSKPRRYTPPPE-----KPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGIN 114
EL+ED D + PPE +P ++ +K EK + + QL YQLEG+N
Sbjct: 335 ELEEDVDPVKIKEFEALQIPPEIKHMERPASESWQKLEKSREYKNSN--QLREYQLEGMN 392
Query: 115 WLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFE 174
WL ++W + ILADEMGLGKTIQ+ITFL +F G GPFL+ APLSTI NWEREF
Sbjct: 393 WLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFLMG-IHGPFLIIAPLSTITNWEREFR 451
Query: 175 TWAPDFYVVTYVGDKDCRIVLRDHDISWEDT 205
TW + + Y G + R +++ +++ + DT
Sbjct: 452 TWT-EMNAIVYHGSQISRQMIQQYEMVYRDT 481
>UNIPROTKB|C9JFU2 [details] [associations]
symbol:CHD6 "Chromodomain-helicase-DNA-binding protein 6"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953 Pfam:PF00176
PROSITE:PS50013 SMART:SM00298 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
EMBL:AL121674 EMBL:AL031669 EMBL:AL031667 IPI:IPI00395823
HGNC:HGNC:19057 ChiTaRS:CHD6 ProteinModelPortal:C9JFU2 SMR:C9JFU2
STRING:C9JFU2 Ensembl:ENST00000309279 HOGENOM:HOG000171128
ArrayExpress:C9JFU2 Bgee:C9JFU2 Uniprot:C9JFU2
Length = 822
Score = 292 (107.8 bits), Expect = 1.1e-24, P = 1.1e-24
Identities = 65/150 (43%), Positives = 89/150 (59%)
Query: 60 ELQEDEDGASGSKPRRYTPPPE-----KPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGIN 114
EL+ED D A + PE +P +D +K EK + + QL YQLEG+N
Sbjct: 413 ELEEDVDPAKVKEFESLQVLPEIKHVERPASDSWQKLEKSREYKNSN--QLREYQLEGMN 470
Query: 115 WLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFE 174
WL ++W + ILADEMGLGKTIQ+ITFL +F G GPFL+ APLSTI NWEREF
Sbjct: 471 WLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFLRG-IHGPFLIIAPLSTITNWEREFR 529
Query: 175 TWAPDFYVVTYVGDKDCRIVLRDHDISWED 204
TW + + Y G + R +++ +++ + D
Sbjct: 530 TWT-EMNAIVYHGSQISRQMIQQYEMVYRD 558
>UNIPROTKB|E1BDZ3 [details] [associations]
symbol:CHD9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 OMA:MWGHQTA EMBL:DAAA02046444
IPI:IPI00705152 Ensembl:ENSBTAT00000002955 Uniprot:E1BDZ3
Length = 2900
Score = 299 (110.3 bits), Expect = 1.1e-24, P = 1.1e-24
Identities = 64/146 (43%), Positives = 91/146 (62%)
Query: 63 EDEDGASGSKPRRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQ 122
E+ + S+P T ++P ++ KK ++ + + G QL YQLEG+NWL ++W
Sbjct: 823 EEFEQLQASRPD--TRHLDRPPPNIWKKIDQSRDYKN--GNQLREYQLEGLNWLLFNWYN 878
Query: 123 NIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYV 182
+ ILADEMGLGKTIQ+ITFLY + G +GPFL+ APLSTI NWEREF TW D V
Sbjct: 879 RRNCILADEMGLGKTIQSITFLYEILLTG-IRGPFLIIAPLSTIANWEREFRTWT-DINV 936
Query: 183 VTYVGDKDCRIVLRDHDISWEDTANR 208
V Y G R +++ +++ + D+ R
Sbjct: 937 VVYHGSLISRQMIQQYEMYFRDSQGR 962
>RGD|1306794 [details] [associations]
symbol:Chd1 "chromodomain helicase DNA binding protein 1"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=ISO]
[GO:0035064 "methylated histone residue binding" evidence=ISO]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1306794 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0006338 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 GeneTree:ENSGT00560000076896 OrthoDB:EOG4PG601
IPI:IPI00767719 Ensembl:ENSRNOT00000019358 UCSC:RGD:1306794
Uniprot:D4AAG9
Length = 904
Score = 291 (107.5 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 55/109 (50%), Positives = 74/109 (67%)
Query: 92 EKQPPFLDD-TGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKE 150
+KQP ++ G++L YQL G+NWL +SW + ILADEMGLGKTIQTI+FL LF E
Sbjct: 465 KKQPSYIGGHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHE 524
Query: 151 GHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHD 199
GPFL+ PLST+ +W+RE +TWA V Y+GD + R ++R H+
Sbjct: 525 HQLYGPFLLVVPLSTLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHE 573
>UNIPROTKB|F1NLW6 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 EMBL:AADN02019534 EMBL:AADN02019532
EMBL:AADN02019533 IPI:IPI00572954 Ensembl:ENSGALT00000002030
ArrayExpress:F1NLW6 Uniprot:F1NLW6
Length = 2005
Score = 295 (108.9 bits), Expect = 1.9e-24, P = 1.9e-24
Identities = 65/151 (43%), Positives = 90/151 (59%)
Query: 60 ELQEDEDGASGSKPRRYTPPPE-----KPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGIN 114
EL+ED D + PPE +P ++ +K EK + + QL YQLEG+N
Sbjct: 210 ELEEDVDPVKIKEFEALQIPPEIKHMERPASESWQKLEKSREYKNSN--QLREYQLEGMN 267
Query: 115 WLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFE 174
WL ++W + ILADEMGLGKTIQ+ITFL +F G GPFL+ APLSTI NWEREF
Sbjct: 268 WLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFLMG-IHGPFLIIAPLSTITNWEREFR 326
Query: 175 TWAPDFYVVTYVGDKDCRIVLRDHDISWEDT 205
TW + + Y G + R +++ +++ + DT
Sbjct: 327 TWT-EMNAIVYHGSQISRQMIQQYEMVYRDT 356
>UNIPROTKB|F1NLV5 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
OMA:CKWATME GeneTree:ENSGT00560000077077 EMBL:AADN02019534
EMBL:AADN02019532 EMBL:AADN02019533 IPI:IPI00588365
Ensembl:ENSGALT00000002034 ArrayExpress:F1NLV5 Uniprot:F1NLV5
Length = 2007
Score = 295 (108.9 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 65/151 (43%), Positives = 90/151 (59%)
Query: 60 ELQEDEDGASGSKPRRYTPPPE-----KPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGIN 114
EL+ED D + PPE +P ++ +K EK + + QL YQLEG+N
Sbjct: 210 ELEEDVDPVKIKEFEALQIPPEIKHMERPASESWQKLEKSREYKNSN--QLREYQLEGMN 267
Query: 115 WLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFE 174
WL ++W + ILADEMGLGKTIQ+ITFL +F G GPFL+ APLSTI NWEREF
Sbjct: 268 WLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFLMG-IHGPFLIIAPLSTITNWEREFR 326
Query: 175 TWAPDFYVVTYVGDKDCRIVLRDHDISWEDT 205
TW + + Y G + R +++ +++ + DT
Sbjct: 327 TWT-EMNAIVYHGSQISRQMIQQYEMVYRDT 356
>DICTYBASE|DDB_G0284171 [details] [associations]
symbol:DDB_G0284171 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISS] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 dictyBase:DDB_G0284171
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0006357 EMBL:AAFI02000063 GO:GO:0004003 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR025260 Pfam:PF13907
KO:K11367 RefSeq:XP_638708.1 ProteinModelPortal:Q54Q16
STRING:Q54Q16 EnsemblProtists:DDB0220640 GeneID:8624452
KEGG:ddi:DDB_G0284171 InParanoid:Q54Q16 OMA:DINATEF
ProtClustDB:CLSZ2732060 Uniprot:Q54Q16
Length = 1917
Score = 294 (108.6 bits), Expect = 2.4e-24, P = 2.4e-24
Identities = 62/119 (52%), Positives = 76/119 (63%)
Query: 90 KYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFK 149
K + QP ++ G L YQ+EG+NWL +SW N + ILADEMGLGKTIQTI+FL LF
Sbjct: 742 KLDTQPSWIS-AGT-LRDYQMEGLNWLVHSWMNNTNVILADEMGLGKTIQTISFLSYLFN 799
Query: 150 EGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANR 208
E KGPFLV PLSTI NW+REF WAP V+ Y G R ++R ++ T NR
Sbjct: 800 EQDIKGPFLVVVPLSTIENWQREFAKWAPAMNVIVYTGTGQSRDIIRLYEFY---TTNR 855
>UNIPROTKB|E1BS47 [details] [associations]
symbol:CHD7 "Chromodomain-helicase-DNA-binding protein 7"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00717
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0003682 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 EMBL:AADN02022009 EMBL:AADN02022010
IPI:IPI00598234 Ensembl:ENSGALT00000005903 ArrayExpress:E1BS47
Uniprot:E1BS47
Length = 1326
Score = 291 (107.5 bits), Expect = 3.0e-24, P = 3.0e-24
Identities = 61/128 (47%), Positives = 83/128 (64%)
Query: 81 EKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQT 140
E+P D KK E + ++ +L YQLEG+NWL ++W + ILADEMGLGKTIQ+
Sbjct: 132 ERPPADDWKKSESSREYKNNN--KLREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQS 189
Query: 141 ITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDI 200
ITFLY ++ +G GPFLV APLSTI NWEREF TW + VV Y G + R ++ +++
Sbjct: 190 ITFLYEIYLKG-IHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYHGSQASRRTIQLYEM 247
Query: 201 SWEDTANR 208
++D R
Sbjct: 248 YFKDPQGR 255
>UNIPROTKB|O14646 [details] [associations]
symbol:CHD1 "Chromodomain-helicase-DNA-binding protein 1"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0035064 "methylated histone residue
binding" evidence=IDA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=TAS] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0003677 GO:GO:0006357 GO:GO:0006351 GO:GO:0006338
GO:GO:0004003 GO:GO:0035064 InterPro:IPR016197 SUPFAM:SSF54160
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
HOVERGEN:HBG005325 InterPro:IPR025260 Pfam:PF13907 CTD:1105
KO:K11367 EMBL:AF006513 EMBL:AC022121 EMBL:BC117134 IPI:IPI00297851
IPI:IPI00954192 RefSeq:NP_001261.2 UniGene:Hs.643465 PDB:2B2T
PDB:2B2U PDB:2B2V PDB:2B2W PDB:2B2Y PDB:4B4C PDBsum:2B2T
PDBsum:2B2U PDBsum:2B2V PDBsum:2B2W PDBsum:2B2Y PDBsum:4B4C
ProteinModelPortal:O14646 SMR:O14646 IntAct:O14646 STRING:O14646
PhosphoSite:O14646 PaxDb:O14646 PRIDE:O14646
Ensembl:ENST00000284049 GeneID:1105 KEGG:hsa:1105 UCSC:uc003knf.3
GeneCards:GC05M098219 H-InvDB:HIX0005061 HGNC:HGNC:1915
HPA:HPA022236 MIM:602118 neXtProt:NX_O14646 PharmGKB:PA26451
HOGENOM:HOG000207917 InParanoid:O14646 OMA:AETHENE
OrthoDB:EOG4PG601 PhylomeDB:O14646 DrugBank:DB00445
EvolutionaryTrace:O14646 GenomeRNAi:1105 NextBio:4580
ArrayExpress:O14646 Bgee:O14646 CleanEx:HS_CHD1
Genevestigator:O14646 GermOnline:ENSG00000153922 Uniprot:O14646
Length = 1710
Score = 292 (107.8 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 56/115 (48%), Positives = 76/115 (66%)
Query: 92 EKQPPFLDD-TGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKE 150
+KQP ++ G++L YQL G+NWL +SW + ILADEMGLGKTIQTI+FL LF E
Sbjct: 467 KKQPSYIGGHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHE 526
Query: 151 GHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDT 205
GPFL+ PLST+ +W+RE +TWA V Y+GD + R ++R H+ + T
Sbjct: 527 HQLYGPFLLVVPLSTLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWTHHQT 581
>MGI|MGI:88393 [details] [associations]
symbol:Chd1 "chromodomain helicase DNA binding protein 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=NAS] [GO:0004386 "helicase activity"
evidence=NAS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=NAS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006333 "chromatin assembly or disassembly" evidence=NAS]
[GO:0006338 "chromatin remodeling" evidence=IGI] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0035064 "methylated histone
residue binding" evidence=ISO] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 MGI:MGI:88393 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 GO:GO:0003682 GO:GO:0006338 GO:GO:0006333
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 HOVERGEN:HBG005325
InterPro:IPR025260 Pfam:PF13907 CTD:1105
GeneTree:ENSGT00560000076896 KO:K11367 HOGENOM:HOG000207917
OMA:AETHENE OrthoDB:EOG4PG601 EMBL:L10410 EMBL:CH466630
EMBL:BC115822 IPI:IPI00107999 PIR:A47392 RefSeq:NP_031716.2
UniGene:Mm.8137 ProteinModelPortal:P40201 SMR:P40201 IntAct:P40201
STRING:P40201 PhosphoSite:P40201 PaxDb:P40201 PRIDE:P40201
Ensembl:ENSMUST00000024627 GeneID:12648 KEGG:mmu:12648
InParanoid:Q14BJ0 NextBio:281852 Bgee:P40201 CleanEx:MM_CHD1
Genevestigator:P40201 GermOnline:ENSMUSG00000023852 Uniprot:P40201
Length = 1711
Score = 291 (107.5 bits), Expect = 4.2e-24, P = 4.2e-24
Identities = 55/109 (50%), Positives = 74/109 (67%)
Query: 92 EKQPPFLDD-TGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKE 150
+KQP ++ G++L YQL G+NWL +SW + ILADEMGLGKTIQTI+FL LF E
Sbjct: 465 KKQPSYIGGHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHE 524
Query: 151 GHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHD 199
GPFL+ PLST+ +W+RE +TWA V Y+GD + R ++R H+
Sbjct: 525 HQLYGPFLLVVPLSTLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHE 573
>UNIPROTKB|B6ZLK2 [details] [associations]
symbol:CHD1 "Chromodomain-helicase-DNA-binding protein 1"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000775
"chromosome, centromeric region" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0000775 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 EMBL:AB465210 IPI:IPI00573130 UniGene:Gga.4301
UniGene:Gga.8463 STRING:B6ZLK2 HOVERGEN:HBG005325
InterPro:IPR025260 Pfam:PF13907 Uniprot:B6ZLK2
Length = 1719
Score = 291 (107.5 bits), Expect = 4.3e-24, P = 4.3e-24
Identities = 55/109 (50%), Positives = 73/109 (66%)
Query: 92 EKQPPFLDD-TGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKE 150
+KQP ++ ++L YQL G+NWL +SW + ILADEMGLGKTIQTI+FL LF E
Sbjct: 463 KKQPSYIGGHESLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHE 522
Query: 151 GHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHD 199
GPFL+ PLST+ +W+RE +TWAP V Y+GD R ++R H+
Sbjct: 523 HQLYGPFLLVVPLSTLTSWQREIQTWAPQMNAVVYLGDITSRNMIRTHE 571
>UNIPROTKB|F1RN66 [details] [associations]
symbol:CHD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
EMBL:CU570924 EMBL:CU928692 Ensembl:ENSSSCT00000015489
Uniprot:F1RN66
Length = 1794
Score = 291 (107.5 bits), Expect = 4.5e-24, P = 4.5e-24
Identities = 55/109 (50%), Positives = 74/109 (67%)
Query: 92 EKQPPFLDD-TGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKE 150
+KQP ++ G++L YQL G+NWL +SW + ILADEMGLGKTIQTI+FL LF E
Sbjct: 461 KKQPSYIGGHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHE 520
Query: 151 GHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHD 199
GPFL+ PLST+ +W+RE +TWA V Y+GD + R ++R H+
Sbjct: 521 HQLYGPFLLVVPLSTLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHE 569
>UNIPROTKB|I3L6N4 [details] [associations]
symbol:CHD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
EMBL:CU570924 EMBL:CU928692 Ensembl:ENSSSCT00000022643
Uniprot:I3L6N4
Length = 1798
Score = 291 (107.5 bits), Expect = 4.5e-24, P = 4.5e-24
Identities = 55/109 (50%), Positives = 74/109 (67%)
Query: 92 EKQPPFLDD-TGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKE 150
+KQP ++ G++L YQL G+NWL +SW + ILADEMGLGKTIQTI+FL LF E
Sbjct: 461 KKQPSYIGGHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHE 520
Query: 151 GHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHD 199
GPFL+ PLST+ +W+RE +TWA V Y+GD + R ++R H+
Sbjct: 521 HQLYGPFLLVVPLSTLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHE 569
>UNIPROTKB|I3LIS2 [details] [associations]
symbol:CHD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035064 "methylated histone residue binding"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0006338 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 OMA:AETHENE EMBL:CU570924
EMBL:CU928692 Ensembl:ENSSSCT00000032432 Uniprot:I3LIS2
Length = 1799
Score = 291 (107.5 bits), Expect = 4.5e-24, P = 4.5e-24
Identities = 55/109 (50%), Positives = 74/109 (67%)
Query: 92 EKQPPFLDD-TGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKE 150
+KQP ++ G++L YQL G+NWL +SW + ILADEMGLGKTIQTI+FL LF E
Sbjct: 462 KKQPSYIGGHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHE 521
Query: 151 GHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHD 199
GPFL+ PLST+ +W+RE +TWA V Y+GD + R ++R H+
Sbjct: 522 HQLYGPFLLVVPLSTLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHE 570
>UNIPROTKB|F1MGF2 [details] [associations]
symbol:CHD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0035064 "methylated histone residue binding"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0006338 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 OMA:AETHENE EMBL:DAAA02021391
EMBL:DAAA02021392 IPI:IPI00717393 UniGene:Bt.105262
Ensembl:ENSBTAT00000034967 NextBio:20866990 Uniprot:F1MGF2
Length = 1810
Score = 291 (107.5 bits), Expect = 4.6e-24, P = 4.6e-24
Identities = 55/109 (50%), Positives = 74/109 (67%)
Query: 92 EKQPPFLDD-TGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKE 150
+KQP ++ G++L YQL G+NWL +SW + ILADEMGLGKTIQTI+FL LF E
Sbjct: 479 KKQPSYIGGHEGLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHE 538
Query: 151 GHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHD 199
GPFL+ PLST+ +W+RE +TWA V Y+GD + R ++R H+
Sbjct: 539 HQLYGPFLLVVPLSTLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHE 587
>UNIPROTKB|F1PWD8 [details] [associations]
symbol:CHD7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 SMART:SM00717 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0003682 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 OMA:TFGVIFD EMBL:AAEX03015818
EMBL:AAEX03015819 EMBL:AAEX03015820 Ensembl:ENSCAFT00000011497
GeneTree:ENSGT00700000105087 Uniprot:F1PWD8
Length = 2994
Score = 293 (108.2 bits), Expect = 5.1e-24, P = 5.1e-24
Identities = 61/128 (47%), Positives = 83/128 (64%)
Query: 81 EKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQT 140
E+P D KK E + ++ +L YQLEG+NWL ++W + ILADEMGLGKTIQ+
Sbjct: 945 ERPPADDWKKSESSREYKNNN--KLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQS 1002
Query: 141 ITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDI 200
ITFLY ++ +G GPFLV APLSTI NWEREF TW + VV Y G + R ++ +++
Sbjct: 1003 ITFLYEIYLKG-IHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYHGSQASRRTIQSYEM 1060
Query: 201 SWEDTANR 208
++D R
Sbjct: 1061 YFKDPQGR 1068
>UNIPROTKB|E1BPM4 [details] [associations]
symbol:CHD7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060324 "face development" evidence=IEA] [GO:0060123
"regulation of growth hormone secretion" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IEA] [GO:0060021
"palate development" evidence=IEA] [GO:0050890 "cognition"
evidence=IEA] [GO:0048844 "artery morphogenesis" evidence=IEA]
[GO:0048752 "semicircular canal morphogenesis" evidence=IEA]
[GO:0043584 "nose development" evidence=IEA] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0030540 "female genitalia development" evidence=IEA]
[GO:0030217 "T cell differentiation" evidence=IEA] [GO:0021545
"cranial nerve development" evidence=IEA] [GO:0008015 "blood
circulation" evidence=IEA] [GO:0007628 "adult walking behavior"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0007512 "adult heart development" evidence=IEA]
[GO:0007417 "central nervous system development" evidence=IEA]
[GO:0003007 "heart morphogenesis" evidence=IEA] [GO:0001701 "in
utero embryonic development" evidence=IEA] [GO:0001501 "skeletal
system development" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 SMART:SM00717 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0008015
GO:GO:0003007 GO:GO:0050890 GO:GO:0001701 GO:GO:0040018
GO:GO:0007417 GO:GO:0003682 GO:GO:0001501 GO:GO:0060041
GO:GO:0007605 GO:GO:0007512 GO:GO:0004386 GO:GO:0035116
GO:GO:0060324 GO:GO:0060021 GO:GO:0048844 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0030540 GO:GO:0007628 GO:GO:0030217 GO:GO:0048752
InterPro:IPR023780 OMA:TFGVIFD GO:GO:0021545 GO:GO:0043584
GO:GO:0060123 GeneTree:ENSGT00560000077077 EMBL:DAAA02038386
EMBL:DAAA02038387 EMBL:DAAA02038388 IPI:IPI00697020
Ensembl:ENSBTAT00000026607 Uniprot:E1BPM4
Length = 2940
Score = 289 (106.8 bits), Expect = 5.6e-24, Sum P(2) = 5.6e-24
Identities = 61/128 (47%), Positives = 83/128 (64%)
Query: 81 EKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQT 140
E+P D KK E + ++ +L YQLEG+NWL ++W + ILADEMGLGKTIQ+
Sbjct: 896 ERPPADDWKKSESSREYKNNN--KLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQS 953
Query: 141 ITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDI 200
ITFLY ++ +G GPFLV APLSTI NWEREF TW + VV Y G + R ++ +++
Sbjct: 954 ITFLYEIYLKG-IHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYHGSQASRRTIQLYEM 1011
Query: 201 SWEDTANR 208
++D R
Sbjct: 1012 YFKDPQGR 1019
Score = 36 (17.7 bits), Expect = 5.6e-24, Sum P(2) = 5.6e-24
Identities = 6/10 (60%), Positives = 6/10 (60%)
Query: 77 TPPPEKPTTD 86
TPPP P D
Sbjct: 680 TPPPSPPPED 689
>UNIPROTKB|F1RT88 [details] [associations]
symbol:CHD7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060324 "face development" evidence=IEA] [GO:0060123
"regulation of growth hormone secretion" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IEA] [GO:0060021
"palate development" evidence=IEA] [GO:0050890 "cognition"
evidence=IEA] [GO:0048844 "artery morphogenesis" evidence=IEA]
[GO:0048752 "semicircular canal morphogenesis" evidence=IEA]
[GO:0043584 "nose development" evidence=IEA] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0030540 "female genitalia development" evidence=IEA]
[GO:0030217 "T cell differentiation" evidence=IEA] [GO:0021545
"cranial nerve development" evidence=IEA] [GO:0008015 "blood
circulation" evidence=IEA] [GO:0007628 "adult walking behavior"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0007512 "adult heart development" evidence=IEA]
[GO:0007417 "central nervous system development" evidence=IEA]
[GO:0003007 "heart morphogenesis" evidence=IEA] [GO:0001701 "in
utero embryonic development" evidence=IEA] [GO:0001501 "skeletal
system development" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 SMART:SM00717 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0008015
GO:GO:0003007 GO:GO:0050890 GO:GO:0001701 GO:GO:0040018
GO:GO:0007417 GO:GO:0003682 GO:GO:0001501 GO:GO:0060041
GO:GO:0007605 GO:GO:0007512 GO:GO:0004386 GO:GO:0035116
GO:GO:0060324 GO:GO:0060021 GO:GO:0048844 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0030540 GO:GO:0007628 GO:GO:0030217 GO:GO:0048752
InterPro:IPR023780 OMA:TFGVIFD GO:GO:0021545 GO:GO:0043584
GO:GO:0060123 GeneTree:ENSGT00560000077077 EMBL:CU179734
Ensembl:ENSSSCT00000006828 Uniprot:F1RT88
Length = 2991
Score = 289 (106.8 bits), Expect = 5.8e-24, Sum P(2) = 5.8e-24
Identities = 61/128 (47%), Positives = 83/128 (64%)
Query: 81 EKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQT 140
E+P D KK E + ++ +L YQLEG+NWL ++W + ILADEMGLGKTIQ+
Sbjct: 939 ERPPADDWKKSESSREYKNNN--KLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQS 996
Query: 141 ITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDI 200
ITFLY ++ +G GPFLV APLSTI NWEREF TW + VV Y G + R ++ +++
Sbjct: 997 ITFLYEIYLKG-IHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYHGSQASRRTIQLYEM 1054
Query: 201 SWEDTANR 208
++D R
Sbjct: 1055 YFKDPQGR 1062
Score = 36 (17.7 bits), Expect = 5.8e-24, Sum P(2) = 5.8e-24
Identities = 6/10 (60%), Positives = 6/10 (60%)
Query: 77 TPPPEKPTTD 86
TPPP P D
Sbjct: 723 TPPPSPPPED 732
>UNIPROTKB|F1PTH3 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00717 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0003682 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 OMA:CKWATME GeneTree:ENSGT00560000077077
EMBL:AAEX03013942 EMBL:AAEX03013943 Ensembl:ENSCAFT00000014716
Uniprot:F1PTH3
Length = 2715
Score = 292 (107.8 bits), Expect = 5.9e-24, P = 5.9e-24
Identities = 65/150 (43%), Positives = 89/150 (59%)
Query: 60 ELQEDEDGASGSKPRRYTPPPE-----KPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGIN 114
EL+ED D A + PE +P +D +K EK + + QL YQLEG+N
Sbjct: 413 ELEEDVDPAKVKEFESLQVLPEIKHVERPASDSWQKLEKSREYKNSN--QLREYQLEGMN 470
Query: 115 WLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFE 174
WL ++W + ILADEMGLGKTIQ+ITFL +F G GPFL+ APLSTI NWEREF
Sbjct: 471 WLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFLRG-IHGPFLIIAPLSTITNWEREFR 529
Query: 175 TWAPDFYVVTYVGDKDCRIVLRDHDISWED 204
TW + + Y G + R +++ +++ + D
Sbjct: 530 TWT-EMNAIVYHGSQISRQMIQQYEMVYRD 558
>UNIPROTKB|J9P0F6 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00717 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0003682 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 CTD:84181 KO:K14436 GeneTree:ENSGT00560000077077
EMBL:AAEX03013942 EMBL:AAEX03013943 RefSeq:XP_534421.3
Ensembl:ENSCAFT00000048852 GeneID:477230 KEGG:cfa:477230
Uniprot:J9P0F6
Length = 2715
Score = 292 (107.8 bits), Expect = 5.9e-24, P = 5.9e-24
Identities = 65/150 (43%), Positives = 89/150 (59%)
Query: 60 ELQEDEDGASGSKPRRYTPPPE-----KPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGIN 114
EL+ED D A + PE +P +D +K EK + + QL YQLEG+N
Sbjct: 413 ELEEDVDPAKVKEFESLQVLPEIKHVERPASDSWQKLEKSREYKNSN--QLREYQLEGMN 470
Query: 115 WLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFE 174
WL ++W + ILADEMGLGKTIQ+ITFL +F G GPFL+ APLSTI NWEREF
Sbjct: 471 WLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFLRG-IHGPFLIIAPLSTITNWEREFR 529
Query: 175 TWAPDFYVVTYVGDKDCRIVLRDHDISWED 204
TW + + Y G + R +++ +++ + D
Sbjct: 530 TWT-EMNAIVYHGSQISRQMIQQYEMVYRD 558
>UNIPROTKB|Q8TD26 [details] [associations]
symbol:CHD6 "Chromodomain-helicase-DNA-binding protein 6"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006338 "chromatin remodeling" evidence=NAS]
[GO:0007399 "nervous system development" evidence=NAS] [GO:0003682
"chromatin binding" evidence=NAS] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00717 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0007399 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GO:GO:0006338
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 PROSITE:PS00598 CleanEx:HS_CHD5 EMBL:AY034072
EMBL:AL121674 EMBL:AL031669 EMBL:AL031667 EMBL:BC021907
EMBL:BC039860 EMBL:BC040016 EMBL:AF525085 EMBL:AB037756
EMBL:AK026022 IPI:IPI00220289 IPI:IPI00395823 IPI:IPI00513717
RefSeq:NP_115597.3 UniGene:Hs.740645 UniGene:Hs.741381 PDB:2EPB
PDBsum:2EPB ProteinModelPortal:Q8TD26 SMR:Q8TD26 IntAct:Q8TD26
MINT:MINT-1197235 STRING:Q8TD26 PhosphoSite:Q8TD26 DMDM:296439466
PaxDb:Q8TD26 PRIDE:Q8TD26 Ensembl:ENST00000373222
Ensembl:ENST00000373233 Ensembl:ENST00000440647 GeneID:84181
KEGG:hsa:84181 UCSC:uc002xka.1 UCSC:uc002xkc.3 CTD:84181
GeneCards:GC20M040030 H-InvDB:HIX0015824 H-InvDB:HIX0027712
HGNC:HGNC:19057 neXtProt:NX_Q8TD26 PharmGKB:PA134974700
HOVERGEN:HBG081150 InParanoid:Q8TD26 KO:K14436 OMA:CKWATME
OrthoDB:EOG4NP72J PhylomeDB:Q8TD26 ChiTaRS:CHD6
EvolutionaryTrace:Q8TD26 GenomeRNAi:84181 NextBio:73559
ArrayExpress:Q8TD26 Bgee:Q8TD26 CleanEx:HS_CHD6
Genevestigator:Q8TD26 GermOnline:ENSG00000124177 Uniprot:Q8TD26
Length = 2715
Score = 292 (107.8 bits), Expect = 5.9e-24, P = 5.9e-24
Identities = 65/150 (43%), Positives = 89/150 (59%)
Query: 60 ELQEDEDGASGSKPRRYTPPPE-----KPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGIN 114
EL+ED D A + PE +P +D +K EK + + QL YQLEG+N
Sbjct: 413 ELEEDVDPAKVKEFESLQVLPEIKHVERPASDSWQKLEKSREYKNSN--QLREYQLEGMN 470
Query: 115 WLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFE 174
WL ++W + ILADEMGLGKTIQ+ITFL +F G GPFL+ APLSTI NWEREF
Sbjct: 471 WLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFLRG-IHGPFLIIAPLSTITNWEREFR 529
Query: 175 TWAPDFYVVTYVGDKDCRIVLRDHDISWED 204
TW + + Y G + R +++ +++ + D
Sbjct: 530 TWT-EMNAIVYHGSQISRQMIQQYEMVYRD 558
>UNIPROTKB|F1N734 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00717 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0003682 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 OMA:CKWATME GeneTree:ENSGT00560000077077
EMBL:DAAA02036652 EMBL:DAAA02036653 EMBL:DAAA02036654
EMBL:DAAA02036655 IPI:IPI00924240 Ensembl:ENSBTAT00000061177
ArrayExpress:F1N734 Uniprot:F1N734
Length = 2720
Score = 292 (107.8 bits), Expect = 5.9e-24, P = 5.9e-24
Identities = 65/150 (43%), Positives = 89/150 (59%)
Query: 60 ELQEDEDGASGSKPRRYTPPPE-----KPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGIN 114
EL+ED D A + PE +P +D +K EK + + QL YQLEG+N
Sbjct: 412 ELEEDVDPAKVKEFESLQVLPEIKHVERPASDSWQKLEKSREYKNSN--QLREYQLEGMN 469
Query: 115 WLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFE 174
WL ++W + ILADEMGLGKTIQ+ITFL +F G GPFL+ APLSTI NWEREF
Sbjct: 470 WLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFLRG-IHGPFLIIAPLSTITNWEREFR 528
Query: 175 TWAPDFYVVTYVGDKDCRIVLRDHDISWED 204
TW + + Y G + R +++ +++ + D
Sbjct: 529 TWT-EMNAIVYHGSQISRQMIQQYEMVYRD 557
>UNIPROTKB|F1NSG3 [details] [associations]
symbol:CHD7 "Chromodomain-helicase-DNA-binding protein 7"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008015 "blood circulation" evidence=IEA] [GO:0021545 "cranial
nerve development" evidence=IEA] [GO:0030217 "T cell
differentiation" evidence=IEA] [GO:0030540 "female genitalia
development" evidence=IEA] [GO:0035116 "embryonic hindlimb
morphogenesis" evidence=IEA] [GO:0040018 "positive regulation of
multicellular organism growth" evidence=IEA] [GO:0043584 "nose
development" evidence=IEA] [GO:0048752 "semicircular canal
morphogenesis" evidence=IEA] [GO:0048844 "artery morphogenesis"
evidence=IEA] [GO:0050890 "cognition" evidence=IEA] [GO:0060021
"palate development" evidence=IEA] [GO:0060041 "retina development
in camera-type eye" evidence=IEA] [GO:0060123 "regulation of growth
hormone secretion" evidence=IEA] [GO:0060324 "face development"
evidence=IEA] [GO:0001501 "skeletal system development"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0003007 "heart morphogenesis" evidence=IEA]
[GO:0007417 "central nervous system development" evidence=IEA]
[GO:0007512 "adult heart development" evidence=IEA] [GO:0007605
"sensory perception of sound" evidence=IEA] [GO:0007628 "adult
walking behavior" evidence=IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 SMART:SM00717 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0040018 GO:GO:0003682
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780 IPI:IPI00590082
OMA:TFGVIFD GO:GO:0060123 GeneTree:ENSGT00560000077077
EMBL:AADN02022009 EMBL:AADN02022010 Ensembl:ENSGALT00000024950
ArrayExpress:F1NSG3 Uniprot:F1NSG3
Length = 2248
Score = 291 (107.5 bits), Expect = 6.0e-24, P = 6.0e-24
Identities = 61/128 (47%), Positives = 83/128 (64%)
Query: 81 EKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQT 140
E+P D KK E + ++ +L YQLEG+NWL ++W + ILADEMGLGKTIQ+
Sbjct: 184 ERPPADDWKKSESSREYKNNN--KLREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQS 241
Query: 141 ITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDI 200
ITFLY ++ +G GPFLV APLSTI NWEREF TW + VV Y G + R ++ +++
Sbjct: 242 ITFLYEIYLKG-IHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYHGSQASRRTIQLYEM 299
Query: 201 SWEDTANR 208
++D R
Sbjct: 300 YFKDPQGR 307
>ZFIN|ZDB-GENE-030131-497 [details] [associations]
symbol:chd9 "chromodomain helicase DNA binding
protein 9" species:7955 "Danio rerio" [GO:0016817 "hydrolase
activity, acting on acid anhydrides" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 ZFIN:ZDB-GENE-030131-497
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 GeneTree:ENSGT00560000077077
EMBL:CR318585 EMBL:CU464124 EMBL:FP015866 IPI:IPI00972236
Ensembl:ENSDART00000027807 Bgee:E7F7W5 Uniprot:E7F7W5
Length = 2948
Score = 292 (107.8 bits), Expect = 6.4e-24, P = 6.4e-24
Identities = 63/138 (45%), Positives = 85/138 (61%)
Query: 71 SKPRRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILAD 130
+KP +T E+P KK EK + ++ L YQLEG+NWL ++W + ILAD
Sbjct: 883 AKP--HTNRMERPPASHWKKLEKSRKYCNENS--LRDYQLEGVNWLLFNWYNRRNCILAD 938
Query: 131 EMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKD 190
EMGLGKTIQ+ITFL +++ G KGPFL+ APLSTI NWEREF TW V+ Y G
Sbjct: 939 EMGLGKTIQSITFLEEIYRTG-IKGPFLIIAPLSTIANWEREFRTWT-HLNVIVYHGSVV 996
Query: 191 CRIVLRDHDISWEDTANR 208
R +L+ +++ D+ R
Sbjct: 997 SRQMLQQYEMYCRDSQGR 1014
>ZFIN|ZDB-GENE-070912-179 [details] [associations]
symbol:chd7 "chromodomain helicase DNA binding
protein 7" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016817 "hydrolase
activity, acting on acid anhydrides" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007368 "determination of left/right symmetry"
evidence=IMP] [GO:0001756 "somitogenesis" evidence=IMP] [GO:0060041
"retina development in camera-type eye" evidence=IMP] [GO:0021602
"cranial nerve morphogenesis" evidence=IMP] [GO:0001947 "heart
looping" evidence=IMP] [GO:0030282 "bone mineralization"
evidence=IMP] [GO:0042472 "inner ear morphogenesis" evidence=IMP]
[GO:0014029 "neural crest formation" evidence=IMP]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 ZFIN:ZDB-GENE-070912-179 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0001756 GO:GO:0042472
GO:GO:0060041 GO:GO:0004386 GO:GO:0001947 GO:GO:0030282
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 GeneTree:ENSGT00560000077077
GO:GO:0021602 EMBL:CR450710 GO:GO:0014029 IPI:IPI00493585
Ensembl:ENSDART00000016208 Ensembl:ENSDART00000135230
Uniprot:F1QGL1
Length = 3140
Score = 290 (107.1 bits), Expect = 8.2e-24, Sum P(2) = 8.2e-24
Identities = 61/128 (47%), Positives = 81/128 (63%)
Query: 81 EKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQT 140
E+P T +K E + + L YQLEG+NWL ++W + ILADEMGLGKTIQ+
Sbjct: 990 ERPPTSDWQKSESSREYKNANA--LREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQS 1047
Query: 141 ITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDI 200
ITFLY ++ +G GPFLV APLSTI NWEREF TW + VV Y G + R ++ +++
Sbjct: 1048 ITFLYEIYLKG-IHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYHGSQASRKTIQAYEM 1105
Query: 201 SWEDTANR 208
+ DT R
Sbjct: 1106 YYRDTQGR 1113
Score = 34 (17.0 bits), Expect = 8.2e-24, Sum P(2) = 8.2e-24
Identities = 6/26 (23%), Positives = 13/26 (50%)
Query: 61 LQEDEDGASGSKPRRYTPPPEKPTTD 86
+ +D+DG + P+ T ++ D
Sbjct: 815 ISDDDDGDDSAGPKSPTTSEQQELPD 840
>UNIPROTKB|Q06A37 [details] [associations]
symbol:CHD7 "Chromodomain-helicase-DNA-binding protein 7"
species:9031 "Gallus gallus" [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00592 SMART:SM00717
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GO:GO:0016568
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
PROSITE:PS00598 HOVERGEN:HBG081150 EMBL:DQ978381 IPI:IPI00590082
RefSeq:NP_001071054.1 UniGene:Gga.20865 ProteinModelPortal:Q06A37
SMR:Q06A37 GeneID:421140 KEGG:gga:421140 CTD:55636
HOGENOM:HOG000246942 InParanoid:Q06A37 KO:K14437 OrthoDB:EOG4MCWZD
NextBio:20823957 Uniprot:Q06A37
Length = 3011
Score = 291 (107.5 bits), Expect = 8.4e-24, P = 8.4e-24
Identities = 61/128 (47%), Positives = 83/128 (64%)
Query: 81 EKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQT 140
E+P D KK E + ++ +L YQLEG+NWL ++W + ILADEMGLGKTIQ+
Sbjct: 947 ERPPADDWKKSESSREYKNNN--KLREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQS 1004
Query: 141 ITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDI 200
ITFLY ++ +G GPFLV APLSTI NWEREF TW + VV Y G + R ++ +++
Sbjct: 1005 ITFLYEIYLKG-IHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYHGSQASRRTIQLYEM 1062
Query: 201 SWEDTANR 208
++D R
Sbjct: 1063 YFKDPQGR 1070
>UNIPROTKB|H9L0N0 [details] [associations]
symbol:H9L0N0 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 EMBL:AADN02032856 EMBL:AADN02032857
EMBL:AADN02032858 EMBL:AADN02032859 EMBL:AADN02032860
EMBL:AADN02032861 EMBL:AADN02032862 EMBL:AADN02032863
EMBL:AADN02032864 EMBL:AADN02032865 Ensembl:ENSGALT00000023599
Uniprot:H9L0N0
Length = 1444
Score = 287 (106.1 bits), Expect = 9.0e-24, P = 9.0e-24
Identities = 55/109 (50%), Positives = 73/109 (66%)
Query: 92 EKQPPFLDDTG-MQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKE 150
+KQP ++ ++L YQL G+NWL +SW + ILADEMGLGKTIQTI+FL LF E
Sbjct: 142 KKQPFYIGGRDCLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHE 201
Query: 151 GHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHD 199
GPFL+ PLST+ +W+RE +TWAP V Y+GD R ++R H+
Sbjct: 202 HELYGPFLLVVPLSTLTSWQREIQTWAPQMNAVVYLGDITSRNMIRTHE 250
>RGD|1311921 [details] [associations]
symbol:Chd7 "chromodomain helicase DNA binding protein 7"
species:10116 "Rattus norvegicus" [GO:0001501 "skeletal system
development" evidence=IEA;ISO] [GO:0001568 "blood vessel
development" evidence=ISO] [GO:0001701 "in utero embryonic
development" evidence=IEA;ISO] [GO:0003007 "heart morphogenesis"
evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0007417 "central
nervous system development" evidence=IEA;ISO] [GO:0007512 "adult
heart development" evidence=IEA;ISO] [GO:0007605 "sensory
perception of sound" evidence=IEA;ISO] [GO:0007626 "locomotory
behavior" evidence=ISO] [GO:0007628 "adult walking behavior"
evidence=IEA;ISO] [GO:0008015 "blood circulation" evidence=IEA;ISO]
[GO:0021545 "cranial nerve development" evidence=IEA;ISO]
[GO:0030217 "T cell differentiation" evidence=IEA;ISO] [GO:0030540
"female genitalia development" evidence=IEA;ISO] [GO:0035116
"embryonic hindlimb morphogenesis" evidence=IEA;ISO] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IEA;ISO] [GO:0042471 "ear morphogenesis" evidence=ISO]
[GO:0042472 "inner ear morphogenesis" evidence=ISO] [GO:0043010
"camera-type eye development" evidence=ISO] [GO:0043584 "nose
development" evidence=IEA;ISO] [GO:0048752 "semicircular canal
morphogenesis" evidence=IEA;ISO] [GO:0048806 "genitalia
development" evidence=ISO] [GO:0048844 "artery morphogenesis"
evidence=IEA;ISO] [GO:0050890 "cognition" evidence=IEA;ISO]
[GO:0060021 "palate development" evidence=IEA;ISO] [GO:0060041
"retina development in camera-type eye" evidence=IEA;ISO]
[GO:0060123 "regulation of growth hormone secretion"
evidence=IEA;ISO] [GO:0060173 "limb development" evidence=ISO]
[GO:0060324 "face development" evidence=IEA;ISO] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 SMART:SM00717 Pfam:PF00385 RGD:1311921 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0008015 GO:GO:0003007
GO:GO:0050890 GO:GO:0001701 GO:GO:0040018 GO:GO:0007417
GO:GO:0003682 GO:GO:0001501 GO:GO:0060041 GO:GO:0007605
GO:GO:0007512 GO:GO:0004386 GO:GO:0035116 GO:GO:0060324
GO:GO:0060021 GO:GO:0048844 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030540
GO:GO:0007628 GO:GO:0030217 GO:GO:0048752 InterPro:IPR023780
CTD:55636 KO:K14437 OrthoDB:EOG4MCWZD GO:GO:0021545 GO:GO:0043584
GO:GO:0060123 GeneTree:ENSGT00560000077077 IPI:IPI00366595
RefSeq:XP_003749947.1 PRIDE:D3ZAP7 Ensembl:ENSRNOT00000008901
GeneID:312974 KEGG:rno:312974 UCSC:RGD:1311921 Uniprot:D3ZAP7
Length = 2985
Score = 289 (106.8 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 61/128 (47%), Positives = 83/128 (64%)
Query: 81 EKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQT 140
E+P D KK E + ++ +L YQLEG+NWL ++W + ILADEMGLGKTIQ+
Sbjct: 935 ERPPADDWKKSESSREYKNNN--KLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQS 992
Query: 141 ITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDI 200
ITFLY ++ +G GPFLV APLSTI NWEREF TW + VV Y G + R ++ +++
Sbjct: 993 ITFLYEIYLKG-IHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYHGSQASRRTIQLYEM 1050
Query: 201 SWEDTANR 208
++D R
Sbjct: 1051 YFKDPQGR 1058
>MGI|MGI:2444748 [details] [associations]
symbol:Chd7 "chromodomain helicase DNA binding protein 7"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001501 "skeletal system development"
evidence=ISO] [GO:0001568 "blood vessel development" evidence=IMP]
[GO:0001701 "in utero embryonic development" evidence=ISO;IMP]
[GO:0003007 "heart morphogenesis" evidence=ISO;IMP] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007417 "central
nervous system development" evidence=ISO] [GO:0007512 "adult heart
development" evidence=IMP] [GO:0007605 "sensory perception of
sound" evidence=IMP] [GO:0007626 "locomotory behavior"
evidence=IMP] [GO:0007628 "adult walking behavior" evidence=IMP]
[GO:0008015 "blood circulation" evidence=IMP] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016817 "hydrolase activity, acting on
acid anhydrides" evidence=IEA] [GO:0021545 "cranial nerve
development" evidence=ISO] [GO:0030217 "T cell differentiation"
evidence=ISO] [GO:0030540 "female genitalia development"
evidence=IMP] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=IMP] [GO:0040018 "positive regulation of multicellular
organism growth" evidence=IMP] [GO:0042471 "ear morphogenesis"
evidence=IMP] [GO:0042472 "inner ear morphogenesis"
evidence=ISO;IMP] [GO:0043010 "camera-type eye development"
evidence=IMP] [GO:0043584 "nose development" evidence=ISO;IMP]
[GO:0048752 "semicircular canal morphogenesis" evidence=IGI]
[GO:0048806 "genitalia development" evidence=ISO] [GO:0048844
"artery morphogenesis" evidence=IGI] [GO:0050890 "cognition"
evidence=ISO] [GO:0060021 "palate development" evidence=ISO;IMP]
[GO:0060041 "retina development in camera-type eye" evidence=ISO]
[GO:0060123 "regulation of growth hormone secretion" evidence=ISO]
[GO:0060173 "limb development" evidence=ISO] [GO:0060324 "face
development" evidence=ISO] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 SMART:SM00717 MGI:MGI:2444748 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0008015 GO:GO:0003007 GO:GO:0050890 GO:GO:0001701
GO:GO:0040018 GO:GO:0007417 GO:GO:0006351 GO:GO:0003682
GO:GO:0016568 GO:GO:0043010 GO:GO:0001501 GO:GO:0060041
GO:GO:0007605 GO:GO:0007512 GO:GO:0004386 GO:GO:0035116
GO:GO:0060324 GO:GO:0060021 GO:GO:0048844 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0030540 GO:GO:0007628 GO:GO:0030217
GO:GO:0048752 InterPro:IPR023780 PROSITE:PS00598 HOVERGEN:HBG081150
CTD:55636 HOGENOM:HOG000246942 KO:K14437 OrthoDB:EOG4MCWZD
OMA:TFGVIFD GO:GO:0021545 GO:GO:0043584 GO:GO:0060123 EMBL:AK042727
EMBL:AK171051 EMBL:AK171857 EMBL:AK172025 EMBL:AL732627
EMBL:AL805903 EMBL:BC034239 IPI:IPI00345676 IPI:IPI00666779
IPI:IPI00849588 RefSeq:NP_001074886.1 UniGene:Mm.138792
ProteinModelPortal:A2AJK6 SMR:A2AJK6 IntAct:A2AJK6 STRING:A2AJK6
PhosphoSite:A2AJK6 PaxDb:A2AJK6 PRIDE:A2AJK6
Ensembl:ENSMUST00000039267 Ensembl:ENSMUST00000051558
Ensembl:ENSMUST00000127476 GeneID:320790 KEGG:mmu:320790
UCSC:uc008rxy.1 UCSC:uc008rya.1 GeneTree:ENSGT00560000077077
InParanoid:A2AJK6 NextBio:397435 Bgee:A2AJK6 CleanEx:MM_CHD7
Genevestigator:A2AJK6 Uniprot:A2AJK6
Length = 2986
Score = 289 (106.8 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 61/128 (47%), Positives = 83/128 (64%)
Query: 81 EKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQT 140
E+P D KK E + ++ +L YQLEG+NWL ++W + ILADEMGLGKTIQ+
Sbjct: 936 ERPPADDWKKSESSREYKNNN--KLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQS 993
Query: 141 ITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDI 200
ITFLY ++ +G GPFLV APLSTI NWEREF TW + VV Y G + R ++ +++
Sbjct: 994 ITFLYEIYLKG-IHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYHGSQASRRTIQLYEM 1051
Query: 201 SWEDTANR 208
++D R
Sbjct: 1052 YFKDPQGR 1059
>UNIPROTKB|Q9P2D1 [details] [associations]
symbol:CHD7 "Chromodomain-helicase-DNA-binding protein 7"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0007512 "adult heart development" evidence=IEA] [GO:0007605
"sensory perception of sound" evidence=IEA] [GO:0007628 "adult
walking behavior" evidence=IEA] [GO:0008015 "blood circulation"
evidence=IEA] [GO:0030540 "female genitalia development"
evidence=IEA] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=IEA] [GO:0040018 "positive regulation of multicellular
organism growth" evidence=IEA] [GO:0048752 "semicircular canal
morphogenesis" evidence=IEA] [GO:0048844 "artery morphogenesis"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0001701 "in utero embryonic
development" evidence=IMP] [GO:0003007 "heart morphogenesis"
evidence=IMP] [GO:0042472 "inner ear morphogenesis" evidence=IMP]
[GO:0043584 "nose development" evidence=IMP] [GO:0048806 "genitalia
development" evidence=IMP] [GO:0060021 "palate development"
evidence=IMP] [GO:0060041 "retina development in camera-type eye"
evidence=IMP] [GO:0001501 "skeletal system development"
evidence=IMP] [GO:0050890 "cognition" evidence=IMP] [GO:0007417
"central nervous system development" evidence=IMP] [GO:0021545
"cranial nerve development" evidence=IMP] [GO:0060123 "regulation
of growth hormone secretion" evidence=IMP] [GO:0003682 "chromatin
binding" evidence=TAS] [GO:0030217 "T cell differentiation"
evidence=IMP] [GO:0060173 "limb development" evidence=IMP]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0060324 "face development" evidence=IMP]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00592 SMART:SM00717
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0008015 GO:GO:0003007 GO:GO:0050890
GO:GO:0001701 GO:GO:0040018 GO:GO:0007417 GO:GO:0006351
GO:GO:0003682 GO:GO:0016568 GO:GO:0048806 GO:GO:0042472
GO:GO:0001501 GO:GO:0060041 GO:GO:0007605 GO:GO:0007512
GO:GO:0004386 GO:GO:0035116 GO:GO:0060324 GO:GO:0060021
GO:GO:0060173 GO:GO:0048844 InterPro:IPR016197 SUPFAM:SSF54160
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0030540 GO:GO:0007628 GO:GO:0030217 GO:GO:0048752
InterPro:IPR023780 PROSITE:PS00598 HOVERGEN:HBG081150 CTD:55636
KO:K14437 OrthoDB:EOG4MCWZD EMBL:AC023102 EMBL:AC113143
EMBL:AB037837 EMBL:AK000364 EMBL:AK000368 EMBL:BC014681
EMBL:BC051264 EMBL:BC053890 EMBL:BC068000 EMBL:BC080627
EMBL:BC110818 IPI:IPI00472901 IPI:IPI00794880 RefSeq:NP_060250.2
UniGene:Hs.20395 UniGene:Hs.733236 PDB:2CKC PDB:2V0E PDB:2V0F
PDBsum:2CKC PDBsum:2V0E PDBsum:2V0F ProteinModelPortal:Q9P2D1
SMR:Q9P2D1 DIP:DIP-48685N IntAct:Q9P2D1 STRING:Q9P2D1
PhosphoSite:Q9P2D1 DMDM:148877246 PaxDb:Q9P2D1 PRIDE:Q9P2D1
Ensembl:ENST00000307121 Ensembl:ENST00000423902
Ensembl:ENST00000525508 GeneID:55636 KEGG:hsa:55636 UCSC:uc003xue.3
GeneCards:GC08P061642 H-InvDB:HIX0007533 HGNC:HGNC:20626 MIM:214800
MIM:608765 MIM:608892 MIM:612370 neXtProt:NX_Q9P2D1 Orphanet:138
Orphanet:478 Orphanet:432 PharmGKB:PA134948695 InParanoid:Q9P2D1
OMA:TFGVIFD EvolutionaryTrace:Q9P2D1 GenomeRNAi:55636 NextBio:60291
ArrayExpress:Q9P2D1 Bgee:Q9P2D1 CleanEx:HS_CHD7
Genevestigator:Q9P2D1 GermOnline:ENSG00000171316 GO:GO:0021545
GO:GO:0043584 GO:GO:0060123 Uniprot:Q9P2D1
Length = 2997
Score = 289 (106.8 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 61/128 (47%), Positives = 83/128 (64%)
Query: 81 EKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQT 140
E+P D KK E + ++ +L YQLEG+NWL ++W + ILADEMGLGKTIQ+
Sbjct: 946 ERPPADDWKKSESSREYKNNN--KLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQS 1003
Query: 141 ITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDI 200
ITFLY ++ +G GPFLV APLSTI NWEREF TW + VV Y G + R ++ +++
Sbjct: 1004 ITFLYEIYLKG-IHGPFLVIAPLSTIPNWEREFRTWT-ELNVVVYHGSQASRRTIQLYEM 1061
Query: 201 SWEDTANR 208
++D R
Sbjct: 1062 YFKDPQGR 1069
>WB|WBGene00010369 [details] [associations]
symbol:chd-1 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0003677
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
KO:K11367 HOGENOM:HOG000207917 OMA:VERVIKW EMBL:Z92970 PIR:T23056
RefSeq:NP_491994.2 ProteinModelPortal:O17909 SMR:O17909
STRING:O17909 PaxDb:O17909 EnsemblMetazoa:H06O01.2 GeneID:172432
KEGG:cel:CELE_H06O01.2 UCSC:H06O01.2 CTD:172432 WormBase:H06O01.2
InParanoid:O17909 NextBio:875487 Uniprot:O17909
Length = 1461
Score = 285 (105.4 bits), Expect = 1.5e-23, P = 1.5e-23
Identities = 59/128 (46%), Positives = 79/128 (61%)
Query: 80 PEKPTTDLRK-----KYEKQPPFLDDTGMQLHA---YQLEGINWLRYSWGQNIDTILADE 131
P K + LRK K+E P FL G H YQLEG+NW+ Y+W + +ILADE
Sbjct: 372 PNKNSNVLRKRPKFEKFESMPDFLKTDGESTHKLRDYQLEGLNWMVYAWCKGNSSILADE 431
Query: 132 MGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDC 191
MGLGKTIQ+I+ L SLF GP+LV PLST+ W++EF WAP+ +V Y+GD
Sbjct: 432 MGLGKTIQSISLLASLFHRYDLAGPYLVVVPLSTMAAWQKEFAQWAPEMNLVVYMGDVVS 491
Query: 192 RIVLRDHD 199
R ++R ++
Sbjct: 492 RDMIRQYE 499
>UNIPROTKB|E2QUI5 [details] [associations]
symbol:CHD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 CTD:1105
GeneTree:ENSGT00560000076896 KO:K11367 EMBL:AAEX03002026
RefSeq:XP_848459.1 Ensembl:ENSCAFT00000012332 GeneID:488891
KEGG:cfa:488891 NextBio:20862162 Uniprot:E2QUI5
Length = 1711
Score = 285 (105.4 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 54/109 (49%), Positives = 73/109 (66%)
Query: 92 EKQPPFLDD-TGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKE 150
+KQP ++ ++L YQL G+NWL +SW + ILADEMGLGKTIQTI+FL LF E
Sbjct: 466 KKQPSYIGGHESLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHE 525
Query: 151 GHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHD 199
GPFL+ PLST+ +W+RE +TWA V Y+GD + R ++R H+
Sbjct: 526 HQLYGPFLLVVPLSTLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHE 574
>UNIPROTKB|J9P6Y8 [details] [associations]
symbol:CHD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
OMA:AETHENE EMBL:AAEX03002026 Ensembl:ENSCAFT00000043995
Uniprot:J9P6Y8
Length = 1782
Score = 285 (105.4 bits), Expect = 1.9e-23, P = 1.9e-23
Identities = 54/109 (49%), Positives = 73/109 (66%)
Query: 92 EKQPPFLDD-TGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKE 150
+KQP ++ ++L YQL G+NWL +SW + ILADEMGLGKTIQTI+FL LF E
Sbjct: 449 KKQPSYIGGHESLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHE 508
Query: 151 GHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHD 199
GPFL+ PLST+ +W+RE +TWA V Y+GD + R ++R H+
Sbjct: 509 HQLYGPFLLVVPLSTLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHE 557
>UNIPROTKB|F1NP27 [details] [associations]
symbol:CHD1 "Chromodomain-helicase-DNA-binding protein 1"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 EMBL:AADN02065411 EMBL:AADN02065412
EMBL:AADN02065413 IPI:IPI00591777 Ensembl:ENSGALT00000024661
ArrayExpress:F1NP27 Uniprot:F1NP27
Length = 1803
Score = 276 (102.2 bits), Expect = 1.8e-22, P = 1.8e-22
Identities = 54/109 (49%), Positives = 72/109 (66%)
Query: 92 EKQPPFLDD-TGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKE 150
+KQP ++ ++L YQL G+ WL +SW + ILADEMGLGKTIQTI+FL LF E
Sbjct: 464 KKQPSYIGGHESLELRDYQLNGL-WLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHE 522
Query: 151 GHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHD 199
GPFL+ PLST+ +W+RE +TWAP V Y+GD R ++R H+
Sbjct: 523 HQLYGPFLLVVPLSTLTSWQREIQTWAPQMNAVVYLGDITSRNMIRTHE 571
>UNIPROTKB|F1N8K8 [details] [associations]
symbol:CHD1 "Chromodomain-helicase-DNA-binding protein 1"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 OMA:AETHENE EMBL:AADN02065411
EMBL:AADN02065412 EMBL:AADN02065413 IPI:IPI00588290
Ensembl:ENSGALT00000023601 ArrayExpress:F1N8K8 Uniprot:F1N8K8
Length = 1804
Score = 276 (102.2 bits), Expect = 1.8e-22, P = 1.8e-22
Identities = 54/109 (49%), Positives = 72/109 (66%)
Query: 92 EKQPPFLDD-TGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKE 150
+KQP ++ ++L YQL G+ WL +SW + ILADEMGLGKTIQTI+FL LF E
Sbjct: 464 KKQPSYIGGHESLELRDYQLNGL-WLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHE 522
Query: 151 GHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHD 199
GPFL+ PLST+ +W+RE +TWAP V Y+GD R ++R H+
Sbjct: 523 HQLYGPFLLVVPLSTLTSWQREIQTWAPQMNAVVYLGDITSRNMIRTHE 571
>UNIPROTKB|B5DE69 [details] [associations]
symbol:chd8 "Chromodomain-helicase-DNA-binding protein 8"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0016055 GO:GO:0003677 GO:GO:0006351
GO:GO:0016568 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0071339
InterPro:IPR023780 PROSITE:PS00598 HOVERGEN:HBG107676 CTD:57680
KO:K04494 EMBL:BC168549 RefSeq:NP_001131089.2 UniGene:Str.42730
GeneID:100192376 KEGG:xtr:100192376 Xenbase:XB-GENE-966847
Uniprot:B5DE69
Length = 2184
Score = 276 (102.2 bits), Expect = 2.3e-22, P = 2.3e-22
Identities = 65/155 (41%), Positives = 87/155 (56%)
Query: 60 ELQED-EDGASGSKPRRYTPPPE-----KPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGI 113
EL+ED +DG R P +P KK E + G QL YQLEG+
Sbjct: 706 ELKEDVDDGKIEEFKRIEARQPNLKRVARPAATSWKKLELSREY--QNGNQLREYQLEGV 763
Query: 114 NWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREF 173
NWL ++W + ILADEMGLGKTIQ+ITFL ++ G +GPFLV APLSTI NWEREF
Sbjct: 764 NWLLFNWYNRQNCILADEMGLGKTIQSITFLQEVYNVG-IRGPFLVIAPLSTITNWEREF 822
Query: 174 ETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANR 208
+W + Y G R +++ +++ +D+ R
Sbjct: 823 GSWT-QMNTIVYHGSLASRQMIQQYEMYCKDSKGR 856
>RGD|620696 [details] [associations]
symbol:Chd8 "chromodomain helicase DNA binding protein 8"
species:10116 "Rattus norvegicus" [GO:0001701 "in utero embryonic
development" evidence=IEA;ISO] [GO:0002039 "p53 binding"
evidence=ISO;ISS] [GO:0003677 "DNA binding" evidence=ISO;ISS]
[GO:0003678 "DNA helicase activity" evidence=ISO;ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005524 "ATP binding"
evidence=ISO;ISS] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=ISO;IDA] [GO:0008094
"DNA-dependent ATPase activity" evidence=ISO;ISS] [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISO;IDA] [GO:0032508 "DNA duplex unwinding" evidence=ISO]
[GO:0035064 "methylated histone residue binding" evidence=ISO;ISS]
[GO:0042393 "histone binding" evidence=ISO;ISS] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISO;ISS] [GO:0043066
"negative regulation of apoptotic process" evidence=ISO;ISS]
[GO:0043234 "protein complex" evidence=ISO;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=ISO;IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO;ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO;ISS] [GO:0045945 "positive regulation of
transcription from RNA polymerase III promoter" evidence=ISO;ISS]
[GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=ISO;IDA] [GO:0070016 "armadillo repeat domain binding"
evidence=IPI] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 RGD:620696 GO:GO:0005524
GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0006351 GO:GO:0035064 GO:GO:0008013
GO:GO:0045945 GO:GO:0030178 GO:GO:0060070 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
GO:GO:0002039 EMBL:CH474040 InterPro:IPR023780 PROSITE:PS00598
GO:GO:0008094 HOGENOM:HOG000246942 GeneTree:ENSGT00560000077077
HOVERGEN:HBG107676 OrthoDB:EOG4ZPDTC CTD:57680 KO:K04494
EMBL:AF169825 IPI:IPI00201110 IPI:IPI00923717 RefSeq:NP_075222.2
UniGene:Rn.98337 STRING:Q9JIX5 PhosphoSite:Q9JIX5 PRIDE:Q9JIX5
Ensembl:ENSRNOT00000022593 GeneID:65027 KEGG:rno:65027
UCSC:RGD:620696 NextBio:613802 Genevestigator:Q9JIX5 Uniprot:Q9JIX5
Length = 2581
Score = 273 (101.2 bits), Expect = 5.8e-22, P = 5.8e-22
Identities = 65/155 (41%), Positives = 88/155 (56%)
Query: 60 ELQEDED-GASGSKPRRYTPPPE-----KPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGI 113
EL+ED D G R + PE +P + KK E + + QL YQLEG+
Sbjct: 762 ELKEDVDEGKIREFKRIQSRHPELKRVNRPQANAWKKLELSHEYKNRN--QLREYQLEGV 819
Query: 114 NWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREF 173
NWL ++W + ILADEMGLGKTIQ+I FL ++ G GPFLV APLSTI NWEREF
Sbjct: 820 NWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVYNVG-IHGPFLVIAPLSTITNWEREF 878
Query: 174 ETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANR 208
TW + + Y G R +++ +++ +D+ R
Sbjct: 879 NTWT-EMNTIVYHGSLASRQMIQQYEMYCKDSRGR 912
>MGI|MGI:1915022 [details] [associations]
symbol:Chd8 "chromodomain helicase DNA binding protein 8"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IMP] [GO:0002039 "p53 binding" evidence=IPI] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=ISO;IDA] [GO:0003678 "DNA helicase activity" evidence=ISO]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=ISO] [GO:0008094 "DNA-dependent
ATPase activity" evidence=ISO] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0030178 "negative regulation of Wnt receptor
signaling pathway" evidence=ISO] [GO:0032508 "DNA duplex unwinding"
evidence=ISO] [GO:0035064 "methylated histone residue binding"
evidence=ISO] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=ISO]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IMP;IDA] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO;IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0045945 "positive regulation of transcription
from RNA polymerase III promoter" evidence=ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISO]
[GO:0070016 "armadillo repeat domain binding" evidence=ISO]
[GO:0071339 "MLL1 complex" evidence=ISO] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 MGI:MGI:1915022 Pfam:PF00385 GO:GO:0005524
GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0006351 GO:GO:0035064 GO:GO:0008013
GO:GO:0045945 GO:GO:0030178 GO:GO:0060070 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
InterPro:IPR023780 PROSITE:PS00598 GO:GO:0008094
HOGENOM:HOG000246942 GeneTree:ENSGT00560000077077
HOVERGEN:HBG107676 OrthoDB:EOG4ZPDTC CTD:57680 KO:K04494
OMA:FLAYMED EMBL:DQ190419 EMBL:AY863219 EMBL:AK129393 EMBL:AK160299
IPI:IPI00858099 IPI:IPI00923681 RefSeq:NP_963999.2
UniGene:Mm.289934 ProteinModelPortal:Q09XV5 SMR:Q09XV5
IntAct:Q09XV5 STRING:Q09XV5 PhosphoSite:Q09XV5 PaxDb:Q09XV5
PRIDE:Q09XV5 Ensembl:ENSMUST00000089752 GeneID:67772 KEGG:mmu:67772
UCSC:uc007tot.1 UCSC:uc007tov.1 InParanoid:Q09XV5 ChiTaRS:CHD8
NextBio:325525 Bgee:Q09XV5 Genevestigator:Q09XV5 Uniprot:Q09XV5
Length = 2582
Score = 273 (101.2 bits), Expect = 5.8e-22, P = 5.8e-22
Identities = 65/155 (41%), Positives = 88/155 (56%)
Query: 60 ELQEDED-GASGSKPRRYTPPPE-----KPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGI 113
EL+ED D G R + PE +P + KK E + + QL YQLEG+
Sbjct: 764 ELKEDVDEGKIREFKRIQSRHPELRRVNRPQANAWKKLELSHEYKNRN--QLREYQLEGV 821
Query: 114 NWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREF 173
NWL ++W + ILADEMGLGKTIQ+I FL ++ G GPFLV APLSTI NWEREF
Sbjct: 822 NWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVYNVG-IHGPFLVIAPLSTITNWEREF 880
Query: 174 ETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANR 208
TW + + Y G R +++ +++ +D+ R
Sbjct: 881 NTWT-EMNTIVYHGSLASRQMIQQYEMYCKDSRGR 914
>UNIPROTKB|E2QUR1 [details] [associations]
symbol:CHD8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 EMBL:AAEX03009852
Ensembl:ENSCAFT00000009072 Uniprot:E2QUR1
Length = 2200
Score = 272 (100.8 bits), Expect = 6.1e-22, P = 6.1e-22
Identities = 65/155 (41%), Positives = 87/155 (56%)
Query: 60 ELQEDED-GASGSKPRRYTPPPE-----KPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGI 113
EL+ED D G R + PE +P KK E + + QL YQLEG+
Sbjct: 379 ELKEDVDEGKIREFKRIQSRHPELKRVNRPQASAWKKLELSHEYKNRN--QLREYQLEGV 436
Query: 114 NWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREF 173
NWL ++W + ILADEMGLGKTIQ+I FL ++ G GPFLV APLSTI NWEREF
Sbjct: 437 NWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVYNVG-IHGPFLVIAPLSTITNWEREF 495
Query: 174 ETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANR 208
TW + + Y G R +++ +++ +D+ R
Sbjct: 496 NTWT-EMNTIVYHGSLASRQMIQQYEMYCKDSRGR 529
>UNIPROTKB|F1MLB2 [details] [associations]
symbol:CHD8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
[GO:0045945 "positive regulation of transcription from RNA
polymerase III promoter" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0035064 "methylated histone
residue binding" evidence=IEA] [GO:0030178 "negative regulation of
Wnt receptor signaling pathway" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003678 "DNA helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0002039 "p53 binding"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0045945 GO:GO:0030178 GO:GO:0060070
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
InterPro:IPR023780 GO:GO:0008094 GeneTree:ENSGT00560000077077
OMA:FLAYMED EMBL:DAAA02028315 EMBL:DAAA02028312 EMBL:DAAA02028313
EMBL:DAAA02028314 IPI:IPI01017729 Ensembl:ENSBTAT00000027215
Uniprot:F1MLB2
Length = 2537
Score = 272 (100.8 bits), Expect = 7.2e-22, P = 7.2e-22
Identities = 65/155 (41%), Positives = 87/155 (56%)
Query: 60 ELQEDED-GASGSKPRRYTPPPE-----KPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGI 113
EL+ED D G R + PE +P KK E + + QL YQLEG+
Sbjct: 715 ELKEDVDEGKIREFKRIQSRHPELKRVNRPQASAWKKLELSHEYKNRN--QLREYQLEGV 772
Query: 114 NWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREF 173
NWL ++W + ILADEMGLGKTIQ+I FL ++ G GPFLV APLSTI NWEREF
Sbjct: 773 NWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVYNVG-IHGPFLVIAPLSTITNWEREF 831
Query: 174 ETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANR 208
TW + + Y G R +++ +++ +D+ R
Sbjct: 832 NTWT-EMNTIVYHGSLASRQMIQQYEMYCKDSRGR 865
>UNIPROTKB|F1S8J5 [details] [associations]
symbol:CHD8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
[GO:0045945 "positive regulation of transcription from RNA
polymerase III promoter" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0035064 "methylated histone
residue binding" evidence=IEA] [GO:0030178 "negative regulation of
Wnt receptor signaling pathway" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003678 "DNA helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0002039 "p53 binding"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0045945 GO:GO:0030178 GO:GO:0060070
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
InterPro:IPR023780 GO:GO:0008094 GeneTree:ENSGT00560000077077
OMA:FLAYMED EMBL:FP340603 Ensembl:ENSSSCT00000002379
ArrayExpress:F1S8J5 Uniprot:F1S8J5
Length = 2569
Score = 272 (100.8 bits), Expect = 7.3e-22, P = 7.3e-22
Identities = 65/155 (41%), Positives = 87/155 (56%)
Query: 60 ELQEDED-GASGSKPRRYTPPPE-----KPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGI 113
EL+ED D G R + PE +P KK E + + QL YQLEG+
Sbjct: 762 ELKEDVDEGKIREFKRIQSRHPELKRVNRPQASAWKKLELSHEYKNRN--QLREYQLEGV 819
Query: 114 NWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREF 173
NWL ++W + ILADEMGLGKTIQ+I FL ++ G GPFLV APLSTI NWEREF
Sbjct: 820 NWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVYNVG-IHGPFLVIAPLSTITNWEREF 878
Query: 174 ETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANR 208
TW + + Y G R +++ +++ +D+ R
Sbjct: 879 NTWT-EMNTIVYHGSLASRQMIQQYEMYCKDSRGR 912
>UNIPROTKB|Q9HCK8 [details] [associations]
symbol:CHD8 "Chromodomain-helicase-DNA-binding protein 8"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0070016 "armadillo repeat
domain binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IDA]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003678 "DNA helicase activity" evidence=IMP] [GO:0035064
"methylated histone residue binding" evidence=IDA] [GO:0045945
"positive regulation of transcription from RNA polymerase III
promoter" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IDA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IMP] [GO:0043234 "protein complex" evidence=IDA]
[GO:0002039 "p53 binding" evidence=ISS] [GO:0008013 "beta-catenin
binding" evidence=IDA] [GO:0071339 "MLL1 complex" evidence=IDA]
[GO:0042393 "histone binding" evidence=ISS] [GO:0032508 "DNA duplex
unwinding" evidence=IMP] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00592 Pfam:PF00385
GO:GO:0005524 GO:GO:0045892 GO:GO:0043066 GO:GO:0003677
GO:GO:0001701 GO:GO:0045944 GO:GO:0006351 GO:GO:0035064
GO:GO:0008013 GO:GO:0045945 GO:GO:0030178 GO:GO:0060070
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0043044 GO:GO:0071339 GO:GO:0002039 InterPro:IPR023780
PROSITE:PS00598 GO:GO:0008094 HOVERGEN:HBG107676 EMBL:CR749315
EMBL:AL834524 EMBL:AL135744 EMBL:AL161747 EMBL:CB043942
EMBL:AB046784 EMBL:AK131077 EMBL:BC011695 EMBL:BC025964
EMBL:BC036920 EMBL:BC063693 EMBL:BC073903 EMBL:BC098452
IPI:IPI00398992 IPI:IPI00719073 RefSeq:NP_001164100.1
RefSeq:NP_065971.2 UniGene:Hs.530698 PDB:2CKA PDB:2DL6 PDBsum:2CKA
PDBsum:2DL6 ProteinModelPortal:Q9HCK8 SMR:Q9HCK8 IntAct:Q9HCK8
STRING:Q9HCK8 PhosphoSite:Q9HCK8 DMDM:226706293 PaxDb:Q9HCK8
PRIDE:Q9HCK8 Ensembl:ENST00000399982 Ensembl:ENST00000430710
Ensembl:ENST00000557364 GeneID:57680 KEGG:hsa:57680 UCSC:uc001war.2
UCSC:uc001was.2 CTD:57680 GeneCards:GC14M021853 HGNC:HGNC:20153
HPA:HPA000849 MIM:610528 neXtProt:NX_Q9HCK8 PharmGKB:PA134957052
KO:K04494 OMA:FLAYMED EvolutionaryTrace:Q9HCK8 GenomeRNAi:57680
NextBio:64494 ArrayExpress:Q9HCK8 Bgee:Q9HCK8 CleanEx:HS_CHD8
Genevestigator:Q9HCK8 GermOnline:ENSG00000100888 Uniprot:Q9HCK8
Length = 2581
Score = 272 (100.8 bits), Expect = 7.4e-22, P = 7.4e-22
Identities = 65/155 (41%), Positives = 87/155 (56%)
Query: 60 ELQEDED-GASGSKPRRYTPPPE-----KPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGI 113
EL+ED D G R + PE +P KK E + + QL YQLEG+
Sbjct: 762 ELKEDVDEGKIREFKRIQSRHPELKRVNRPQASAWKKLELSHEYKNRN--QLREYQLEGV 819
Query: 114 NWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREF 173
NWL ++W + ILADEMGLGKTIQ+I FL ++ G GPFLV APLSTI NWEREF
Sbjct: 820 NWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVYNVG-IHGPFLVIAPLSTITNWEREF 878
Query: 174 ETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANR 208
TW + + Y G R +++ +++ +D+ R
Sbjct: 879 NTWT-EMNTIVYHGSLASRQMIQQYEMYCKDSRGR 912
>UNIPROTKB|H0YJG4 [details] [associations]
symbol:CHD8 "Chromodomain-helicase-DNA-binding protein 8"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AL135744 EMBL:AL161747
HGNC:HGNC:20153 Ensembl:ENST00000555935 Uniprot:H0YJG4
Length = 873
Score = 266 (98.7 bits), Expect = 7.4e-22, P = 7.4e-22
Identities = 56/127 (44%), Positives = 76/127 (59%)
Query: 82 KPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTI 141
+P KK E + + QL YQLEG+NWL ++W + ILADEMGLGKTIQ+I
Sbjct: 16 RPQASAWKKLELSHEYKNRN--QLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSI 73
Query: 142 TFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDIS 201
FL ++ G GPFLV APLSTI NWEREF TW + + Y G R +++ +++
Sbjct: 74 AFLQEVYNVG-IHGPFLVIAPLSTITNWEREFNTWT-EMNTIVYHGSLASRQMIQQYEMY 131
Query: 202 WEDTANR 208
+D+ R
Sbjct: 132 CKDSRGR 138
>UNIPROTKB|E2QUS7 [details] [associations]
symbol:CHD8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 OMA:FLAYMED EMBL:AAEX03009852
Ensembl:ENSCAFT00000009065 Uniprot:E2QUS7
Length = 2586
Score = 272 (100.8 bits), Expect = 7.4e-22, P = 7.4e-22
Identities = 65/155 (41%), Positives = 87/155 (56%)
Query: 60 ELQEDED-GASGSKPRRYTPPPE-----KPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGI 113
EL+ED D G R + PE +P KK E + + QL YQLEG+
Sbjct: 762 ELKEDVDEGKIREFKRIQSRHPELKRVNRPQASAWKKLELSHEYKNRN--QLREYQLEGV 819
Query: 114 NWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREF 173
NWL ++W + ILADEMGLGKTIQ+I FL ++ G GPFLV APLSTI NWEREF
Sbjct: 820 NWLLFNWYNRQNCILADEMGLGKTIQSIAFLQEVYNVG-IHGPFLVIAPLSTITNWEREF 878
Query: 174 ETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANR 208
TW + + Y G R +++ +++ +D+ R
Sbjct: 879 NTWT-EMNTIVYHGSLASRQMIQQYEMYCKDSRGR 912
>POMBASE|SPAC3G6.01 [details] [associations]
symbol:hrp3 "ATP-dependent DNA helicase Hrp3"
species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] [GO:0000790 "nuclear
chromatin" evidence=NAS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IC] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=NAS] [GO:0008094
"DNA-dependent ATPase activity" evidence=ISM] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IMP]
[GO:0031934 "mating-type region heterochromatin" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEP] [GO:0060303 "regulation of
nucleosome density" evidence=IMP] [GO:0030702 "chromatin silencing
at centromere" evidence=IMP] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
PomBase:SPAC3G6.01 Pfam:PF00385 GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0045944 GO:GO:0006351
GO:GO:0006338 GO:GO:0030466 GO:GO:0000790 GO:GO:0000070
GO:GO:0004003 GO:GO:0031934 InterPro:IPR016197 SUPFAM:SSF54160
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 KO:K11367 HOGENOM:HOG000207917
OrthoDB:EOG4TF3TB GO:GO:0060303 PIR:T38720 RefSeq:NP_594967.1
ProteinModelPortal:O14139 MINT:MINT-4670837 STRING:O14139
EnsemblFungi:SPAC3G6.01.1 GeneID:2543064 KEGG:spo:SPAC3G6.01
OMA:HINGSST NextBio:20804092 Uniprot:O14139
Length = 1388
Score = 263 (97.6 bits), Expect = 3.1e-21, P = 3.1e-21
Identities = 51/117 (43%), Positives = 73/117 (62%)
Query: 89 KKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLF 148
+K E+QP ++ TG +L +QL G+NW+ Y W +N + ILADEMGLGKT+QT+ FL L
Sbjct: 361 RKLEQQPSYI--TGGELRDFQLTGVNWMAYLWHKNENGILADEMGLGKTVQTVAFLSYLA 418
Query: 149 KEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDT 205
GPFLV PLST+ W+ WA D ++Y+G+ R V+RD++ + T
Sbjct: 419 HSLRQHGPFLVVVPLSTVPAWQETLALWASDMNCISYLGNTTSRQVIRDYEFYVDGT 475
>WB|WBGene00007053 [details] [associations]
symbol:chd-7 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0016817 "hydrolase activity, acting on acid
anhydrides" evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00592
SMART:SM00717 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0003682 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR017877 PROSITE:PS50090
InterPro:IPR023780 KO:K14437 GeneTree:ENSGT00560000077077
EMBL:FO080504 EMBL:FO080107 RefSeq:NP_491426.2 PaxDb:O61845
EnsemblMetazoa:T04D1.4 GeneID:172079 KEGG:cel:CELE_T04D1.4
UCSC:T04D1.4 CTD:172079 WormBase:T04D1.4 HOGENOM:HOG000213105
InParanoid:O61845 OMA:LLAFRME NextBio:873933 Uniprot:O61845
Length = 2967
Score = 249 (92.7 bits), Expect = 6.3e-21, Sum P(2) = 6.3e-21
Identities = 51/102 (50%), Positives = 65/102 (63%)
Query: 102 GMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSA 161
G L YQ EG++WL Y + + ILADEMGLGKT+QTITFL ++ G GPFLV
Sbjct: 1194 GNSLREYQFEGVDWLLYCYYNAQNCILADEMGLGKTVQTITFLSRIYDYG-IHGPFLVVV 1252
Query: 162 PLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWE 203
PLSTI NW REFETW D + Y G R VL+ +++ ++
Sbjct: 1253 PLSTIQNWVREFETWT-DMNAIVYHGSAYAREVLQQYEVFYD 1293
Score = 47 (21.6 bits), Expect = 6.3e-21, Sum P(2) = 6.3e-21
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 69 SGSKPR-RYTPPPEKPTTDLRKKYEKQPPFLDDTGMQ 104
+G P+ +Y PPP+ P + ++ Y +Q G Q
Sbjct: 164 NGPPPQGQYPPPPQAPQ-NYQQMYHQQRAQQQQAGQQ 199
>ZFIN|ZDB-GENE-030131-6320 [details] [associations]
symbol:chd8 "chromodomain helicase DNA binding
protein 8" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0071339 "MLL1 complex" evidence=ISS] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00717 Pfam:PF00385
ZFIN:ZDB-GENE-030131-6320 GO:GO:0005524 GO:GO:0006355 GO:GO:0016055
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GO:GO:0016568
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0071339
InterPro:IPR023780 PROSITE:PS00598 EMBL:AL928674 IPI:IPI00919855
UniGene:Dr.81397 PRIDE:B0R0I6 HOVERGEN:HBG107676 OrthoDB:EOG4ZPDTC
Uniprot:B0R0I6
Length = 2511
Score = 262 (97.3 bits), Expect = 8.2e-21, P = 8.2e-21
Identities = 55/133 (41%), Positives = 78/133 (58%)
Query: 72 KPRRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADE 131
+PR P +P KK ++ + + G QL YQLEG+NWL ++W + ILADE
Sbjct: 818 QPRLKRTP--RPAASAWKKLDESTEYKN--GNQLREYQLEGVNWLLFNWYNRQNCILADE 873
Query: 132 MGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDC 191
MGLGKTIQ+I L +F G + PF++ APLSTI NWEREF W D + Y G
Sbjct: 874 MGLGKTIQSIALLSEMFSAG-VQSPFMIIAPLSTITNWEREFSNWT-DMNAIVYHGSLAS 931
Query: 192 RIVLRDHDISWED 204
R +++ +++ +D
Sbjct: 932 RQMIQQYEMYCKD 944
>DICTYBASE|DDB_G0280705 [details] [associations]
symbol:DDB_G0280705 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00717
dictyBase:DDB_G0280705 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0006357 GO:GO:0003682 EMBL:AAFI02000037
GO:GO:0004003 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
KO:K14437 RefSeq:XP_641133.1 ProteinModelPortal:Q54UZ8
EnsemblProtists:DDB0220644 GeneID:8622691 KEGG:ddi:DDB_G0280705
InParanoid:Q54UZ8 OMA:YPHERID ProtClustDB:CLSZ2846801
Uniprot:Q54UZ8
Length = 2373
Score = 252 (93.8 bits), Expect = 1.6e-20, Sum P(2) = 1.6e-20
Identities = 53/130 (40%), Positives = 77/130 (59%)
Query: 80 PEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQ 139
P P T KK ++ P + G +L YQLEG+NWL + W + ++IL DEMGLGKT+Q
Sbjct: 486 PRPPRTAW-KKIDQSPDYFTK-GNKLRPYQLEGLNWLSFCWHEQRNSILGDEMGLGKTVQ 543
Query: 140 TITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHD 199
+++ L +L K +GPFLV APL+TI +W+REFE W D + Y R + R+++
Sbjct: 544 SVSILETLRKVHGIRGPFLVVAPLTTIPHWKREFENWT-DMNALVYHDSGAGRPICRNYE 602
Query: 200 ISWEDTANRG 209
+D G
Sbjct: 603 FYLKDKDGGG 612
Score = 38 (18.4 bits), Expect = 1.6e-20, Sum P(2) = 1.6e-20
Identities = 6/9 (66%), Positives = 7/9 (77%)
Query: 77 TPPPEKPTT 85
TPPP KP +
Sbjct: 195 TPPPPKPVS 203
>CGD|CAL0001390 [details] [associations]
symbol:orf19.3035 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0031934 "mating-type region
heterochromatin" evidence=IEA] [GO:0046695 "SLIK (SAGA-like)
complex" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0030874 "nucleolar chromatin" evidence=IEA] [GO:2000616
"negative regulation of histone H3-K9 acetylation" evidence=IEA]
[GO:0034401 "regulation of transcription by chromatin organization"
evidence=IEA] [GO:0071441 "negative regulation of histone H3-K14
acetylation" evidence=IEA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0006368 "transcription elongation
from RNA polymerase II promoter" evidence=IEA] [GO:0000070 "mitotic
sister chromatid segregation" evidence=IEA] [GO:0060303 "regulation
of nucleosome density" evidence=IEA] [GO:0006200 "ATP catabolic
process" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:2000104 "negative regulation of
DNA-dependent DNA replication" evidence=IEA] [GO:0042766
"nucleosome mobilization" evidence=IEA] [GO:0001178 "regulation of
transcriptional start site selection at RNA polymerase II promoter"
evidence=IEA] [GO:0006363 "termination of RNA polymerase I
transcription" evidence=IEA] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=IEA] [GO:0000182 "rDNA
binding" evidence=IEA] [GO:0031490 "chromatin DNA binding"
evidence=IEA] [GO:0035064 "methylated histone residue binding"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 CGD:CAL0001390
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 EMBL:AACQ01000017
EMBL:AACQ01000015 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907 KO:K11367
RefSeq:XP_721262.1 RefSeq:XP_721533.1 ProteinModelPortal:Q5AI17
STRING:Q5AI17 GeneID:3636889 GeneID:3637077 KEGG:cal:CaO19.10553
KEGG:cal:CaO19.3035 Uniprot:Q5AI17
Length = 1410
Score = 256 (95.2 bits), Expect = 1.8e-20, P = 1.8e-20
Identities = 50/112 (44%), Positives = 72/112 (64%)
Query: 89 KKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLF 148
+K KQP F+ + G +L +QL G+NW+ + W +N + ILADEMGLGKT+QT+ FL L
Sbjct: 348 EKLFKQPVFIKN-G-ELRDFQLTGLNWMAFLWSRNENGILADEMGLGKTVQTVAFLSWLI 405
Query: 149 KEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDI 200
GP LV PLST+ W+ FE WAPD V Y+G+ + R +R++++
Sbjct: 406 YARRQNGPHLVVVPLSTVPAWQETFEKWAPDVNCVYYLGNGEARKTIREYEL 457
>ASPGD|ASPL0000056677 [details] [associations]
symbol:AN1024 species:162425 "Emericella nidulans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0006312 "mitotic
recombination" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 EMBL:BN001308 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
HOGENOM:HOG000172362 EnsemblFungi:CADANIAT00001623 OMA:NNITELW
Uniprot:C8VTY9
Length = 868
Score = 253 (94.1 bits), Expect = 1.8e-20, P = 1.8e-20
Identities = 51/104 (49%), Positives = 65/104 (62%)
Query: 101 TGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVS 160
TG ++ YQLEG+ WL+ W + ILADEMGLGKT+Q I+ L + FKE + GPFL+S
Sbjct: 198 TGGKMRKYQLEGLEWLKSLWMNGLCGILADEMGLGKTVQAIS-LIAFFKEHNVSGPFLIS 256
Query: 161 APLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWED 204
APLST+ NW EF W P V Y G +D R LR ++ D
Sbjct: 257 APLSTVSNWVDEFARWTPGIKTVLYHGTRDERAQLRKKFMNLRD 300
>DICTYBASE|DDB_G0285205 [details] [associations]
symbol:snf2a "SNF2-related protein SNF2a"
species:44689 "Dictyostelium discoideum" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR017956
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00384
SMART:SM00490 dictyBase:DDB_G0285205 GO:GO:0005524 GO:GO:0003677
EMBL:AAFI02000075 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 KO:K11647 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 RefSeq:XP_638342.2
ProteinModelPortal:Q54NM0 STRING:Q54NM0 PRIDE:Q54NM0
EnsemblProtists:DDB0233441 GeneID:8624967 KEGG:ddi:DDB_G0285205
OMA:HASKHRV Uniprot:Q54NM0
Length = 1604
Score = 255 (94.8 bits), Expect = 2.6e-20, P = 2.6e-20
Identities = 55/120 (45%), Positives = 75/120 (62%)
Query: 77 TPPPEKPTTDLRKKYE----KQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEM 132
T P + TT L KK +QP + TG +L YQ+ G+ WL + +N++ ILADEM
Sbjct: 594 TSPLQSTTTILAKKSNNLVIEQPDLM--TGGKLKEYQVTGLEWLISLYTRNLNGILADEM 651
Query: 133 GLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCR 192
GLGKT+QTI F+ L++ + + PFLV APLSTI NW EF W+P +V+ Y G +D R
Sbjct: 652 GLGKTVQTIAFISFLYERMNVREPFLVVAPLSTISNWVSEFARWSPKLHVIVYKGKQDER 711
>POMBASE|SPAC1783.05 [details] [associations]
symbol:hrp1 "ATP-dependent DNA helicase Hrp1"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000779 "condensed chromosome, centromeric
region" evidence=IDA] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004003 "ATP-dependent
DNA helicase activity" evidence=ISM] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=IMP] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IMP] [GO:0007076 "mitotic chromosome
condensation" evidence=IMP] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IDA] [GO:0016592 "mediator complex"
evidence=IPI] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IMP] [GO:0030702 "chromatin
silencing at centromere" evidence=IMP] [GO:0035067 "negative
regulation of histone acetylation" evidence=IMP] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0048096 "chromatin-mediated maintenance
of transcription" evidence=TAS] [GO:0060303 "regulation of
nucleosome density" evidence=IMP] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 PomBase:SPAC1783.05 Pfam:PF00385 GO:GO:0005524
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0045944
GO:GO:0030466 GO:GO:0000122 GO:GO:0000790 GO:GO:0030702
GO:GO:0004003 GO:GO:0007076 GO:GO:0048096 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0000779 GO:GO:0035067 InterPro:IPR023780
PROSITE:PS00598 GO:GO:0016592 GO:GO:0006369 KO:K11367
HOGENOM:HOG000207917 OrthoDB:EOG4TF3TB EMBL:X99021 EMBL:AB027852
PIR:T43334 PIR:T50107 RefSeq:NP_593660.1 ProteinModelPortal:Q9US25
MINT:MINT-4979817 STRING:Q9US25 EnsemblFungi:SPAC1783.05.1
GeneID:2542363 KEGG:spo:SPAC1783.05 OMA:VERVIKW NextBio:20803422
GO:GO:0060303 Uniprot:Q9US25
Length = 1373
Score = 252 (93.8 bits), Expect = 4.5e-20, P = 4.5e-20
Identities = 47/111 (42%), Positives = 68/111 (61%)
Query: 89 KKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLF 148
+K EKQP ++ G ++ +QL GINW+ Y W +N + ILADEMGLGKT+QT+ FL L
Sbjct: 376 RKLEKQPSYIK--GGEIRDFQLTGINWMAYLWHRNENGILADEMGLGKTVQTVCFLSYLV 433
Query: 149 KEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHD 199
GPFL+ PLST+ W+ W PD + Y G+ + R +R+++
Sbjct: 434 HSLKQHGPFLIVVPLSTVPAWQETLANWTPDLNSICYTGNTESRANIREYE 484
>SGD|S000000966 [details] [associations]
symbol:CHD1 "Chromatin remodeler that regulates various
aspects of transcription" species:4932 "Saccharomyces cerevisiae"
[GO:0030874 "nucleolar chromatin" evidence=IDA] [GO:0042766
"nucleosome mobilization" evidence=IDA] [GO:0000182 "rDNA binding"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0046695 "SLIK (SAGA-like)
complex" evidence=IDA] [GO:0000124 "SAGA complex" evidence=IDA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IDA]
[GO:0034401 "regulation of transcription by chromatin organization"
evidence=IGI;IMP] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IDA] [GO:0001178 "regulation of transcriptional start site
selection at RNA polymerase II promoter" evidence=IGI] [GO:2000616
"negative regulation of histone H3-K9 acetylation" evidence=IMP]
[GO:0071441 "negative regulation of histone H3-K14 acetylation"
evidence=IMP] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=IGI;IPI] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0031490 "chromatin DNA binding"
evidence=IDA] [GO:0016584 "nucleosome positioning"
evidence=IGI;IDA] [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0006369 "termination of RNA polymerase II transcription"
evidence=IGI;IMP] [GO:0071894 "histone H2B conserved C-terminal
lysine ubiquitination" evidence=IMP] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0035064 "methylated histone residue binding" evidence=IDA]
[GO:2000104 "negative regulation of DNA-dependent DNA replication"
evidence=IGI] [GO:0006363 "termination of RNA polymerase I
transcription" evidence=IGI] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SGD:S000000966 Pfam:PF00385 GO:GO:0005739
GO:GO:0005524 GO:GO:2000104 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:BK006939 GO:GO:0000124 GO:GO:0046695 GO:GO:0004386
GO:GO:0034401 GO:GO:0006368 GO:GO:0035064 GO:GO:0031490
GO:GO:0042766 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043044
GO:GO:0016584 EMBL:U18917 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 GO:GO:0006363 GO:GO:0008094 GO:GO:0006369
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
KO:K11367 HOGENOM:HOG000207917 PIR:S30818 RefSeq:NP_011091.1
PDB:2DY7 PDB:2DY8 PDB:2H1E PDB:2XB0 PDB:3MWY PDB:3TED PDBsum:2DY7
PDBsum:2DY8 PDBsum:2H1E PDBsum:2XB0 PDBsum:3MWY PDBsum:3TED
ProteinModelPortal:P32657 SMR:P32657 DIP:DIP-6362N IntAct:P32657
MINT:MINT-618890 STRING:P32657 PaxDb:P32657 PeptideAtlas:P32657
EnsemblFungi:YER164W GeneID:856911 KEGG:sce:YER164W CYGD:YER164w
OMA:IKWQFMA OrthoDB:EOG4TF3TB SABIO-RK:P32657
EvolutionaryTrace:P32657 NextBio:983353 Genevestigator:P32657
GermOnline:YER164W GO:GO:0030874 GO:GO:0000182 GO:GO:0071441
GO:GO:2000616 GO:GO:0001178 Uniprot:P32657
Length = 1468
Score = 249 (92.7 bits), Expect = 1.0e-19, P = 1.0e-19
Identities = 49/118 (41%), Positives = 72/118 (61%)
Query: 85 TDLRKKYEK---QPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTI 141
T R ++EK QPPF+ G +L +QL GINW+ + W + + ILADEMGLGKT+QT+
Sbjct: 355 TSQRPRFEKLSVQPPFIK--GGELRDFQLTGINWMAFLWSKGDNGILADEMGLGKTVQTV 412
Query: 142 TFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHD 199
F+ L GP ++ PLST+ W FE WAPD + Y+G++ R +R+++
Sbjct: 413 AFISWLIFARRQNGPHIIVVPLSTMPAWLDTFEKWAPDLNCICYMGNQKSRDTIREYE 470
>CGD|CAL0005444 [details] [associations]
symbol:SNF2 species:5476 "Candida albicans" [GO:0016514
"SWI/SNF complex" evidence=IPI] [GO:0009405 "pathogenesis"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0001102 "RNA polymerase II activating
transcription factor binding" evidence=IEA] [GO:0070577 "histone
acetyl-lysine binding" evidence=IEA] [GO:0031492 "nucleosomal DNA
binding" evidence=IEA] [GO:0016586 "RSC complex" evidence=IEA]
[GO:0044182 "filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:1900430 "positive regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:0036178 "filamentous growth of a population of
unicellular organisms in response to neutral pH" evidence=IMP]
[GO:1900442 "positive regulation of filamentous growth of a
population of unicellular organisms in response to neutral pH"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:1900445 "positive regulation of filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0042766 "nucleosome mobilization" evidence=IEA]
[GO:0005987 "sucrose catabolic process" evidence=IEA] [GO:1900231
"regulation of single-species biofilm formation on inanimate
substrate" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0042148 "strand invasion"
evidence=IEA] [GO:0044109 "cellular alcohol catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0031496 "positive regulation of mating type
switching" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0006261 "DNA-dependent DNA
replication" evidence=IEA] [GO:0061412 "positive regulation of
transcription from RNA polymerase II promoter in response to amino
acid starvation" evidence=IEA] [GO:0036244 "cellular response to
neutral pH" evidence=IMP] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 CGD:CAL0005444 GO:GO:0005524 GO:GO:0071216
GO:GO:0036244 GO:GO:0036180 GO:GO:0036178 GO:GO:0009405
GO:GO:1900445 GO:GO:1900442 GO:GO:0006355 GO:GO:0003677
GO:GO:0016514 GO:GO:0004386 EMBL:AACQ01000007 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 KO:K11786
RefSeq:XP_722570.1 ProteinModelPortal:Q5AM49 MINT:MINT-2832160
STRING:Q5AM49 GeneID:3635855 KEGG:cal:CaO19.1526 Uniprot:Q5AM49
Length = 1690
Score = 249 (92.7 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 53/114 (46%), Positives = 71/114 (62%)
Query: 87 LRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYS 146
++++ KQP L G L YQL+G+ W+ + +++ ILADEMGLGKTIQTI+ L
Sbjct: 765 IKEEVTKQPSIL--VGGTLKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTY 822
Query: 147 LFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDI 200
L + GPFLV PLST+ NW EFE WAP +TY G + R V++ HDI
Sbjct: 823 LVEVKKIPGPFLVIVPLSTVTNWNLEFEKWAPSIKKITYKGTPNQRKVMQ-HDI 875
>UNIPROTKB|Q5AM49 [details] [associations]
symbol:SNF2 "Putative uncharacterized protein SNF2"
species:237561 "Candida albicans SC5314" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016514 "SWI/SNF complex"
evidence=IPI] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0036178 "filamentous growth of a population of unicellular
organisms in response to neutral pH" evidence=IMP] [GO:0036180
"filamentous growth of a population of unicellular organisms in
response to biotic stimulus" evidence=IMP] [GO:0036244 "cellular
response to neutral pH" evidence=IMP] [GO:0044182 "filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:0071216 "cellular response to biotic stimulus" evidence=IMP]
[GO:1900430 "positive regulation of filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:1900442
"positive regulation of filamentous growth of a population of
unicellular organisms in response to neutral pH" evidence=IMP]
[GO:1900445 "positive regulation of filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 CGD:CAL0005444 GO:GO:0005524 GO:GO:0071216
GO:GO:0036244 GO:GO:0036180 GO:GO:0036178 GO:GO:0009405
GO:GO:1900445 GO:GO:1900442 GO:GO:0006355 GO:GO:0003677
GO:GO:0016514 GO:GO:0004386 EMBL:AACQ01000007 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 KO:K11786
RefSeq:XP_722570.1 ProteinModelPortal:Q5AM49 MINT:MINT-2832160
STRING:Q5AM49 GeneID:3635855 KEGG:cal:CaO19.1526 Uniprot:Q5AM49
Length = 1690
Score = 249 (92.7 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 53/114 (46%), Positives = 71/114 (62%)
Query: 87 LRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYS 146
++++ KQP L G L YQL+G+ W+ + +++ ILADEMGLGKTIQTI+ L
Sbjct: 765 IKEEVTKQPSIL--VGGTLKEYQLKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTY 822
Query: 147 LFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDI 200
L + GPFLV PLST+ NW EFE WAP +TY G + R V++ HDI
Sbjct: 823 LVEVKKIPGPFLVIVPLSTVTNWNLEFEKWAPSIKKITYKGTPNQRKVMQ-HDI 875
>TAIR|locus:2041644 [details] [associations]
symbol:CHR5 "chromatin remodeling 5" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0004386 "helicase
activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006333 "chromatin assembly or disassembly" evidence=ISS]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0009506 GO:GO:0005524 GO:GO:0005634
EMBL:CP002685 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR025260 Pfam:PF13907 KO:K11367
IPI:IPI00521189 RefSeq:NP_178970.3 UniGene:At.40665 PRIDE:F4IV99
EnsemblPlants:AT2G13370.1 GeneID:815823 KEGG:ath:AT2G13370
OMA:ARNTKSY Uniprot:F4IV99
Length = 1724
Score = 247 (92.0 bits), Expect = 2.1e-19, P = 2.1e-19
Identities = 51/120 (42%), Positives = 71/120 (59%)
Query: 89 KKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLF 148
+K ++QP +L G L YQLEG+N+L SW + + ILADEMGLGKT+Q+++ L L
Sbjct: 611 RKLDEQPEWL--IGGTLRDYQLEGLNFLVNSWLNDTNVILADEMGLGKTVQSVSMLGFLQ 668
Query: 149 KEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWEDTANR 208
GPFLV PLST+ NW +EF W P ++ YVG + R V + ++ E R
Sbjct: 669 NTQQIPGPFLVVVPLSTLANWAKEFRKWLPGMNIIVYVGTRASREVCQQYEFYNEKKVGR 728
>ZFIN|ZDB-GENE-091113-61 [details] [associations]
symbol:si:dkey-76p7.6 "si:dkey-76p7.6" species:7955
"Danio rerio" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0000729 "DNA double-strand break processing" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISS] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-091113-61 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043044 SUPFAM:SSF46934
GO:GO:0000729 GO:GO:0035861 GeneTree:ENSGT00630000089890
EMBL:BX927385 IPI:IPI00901431 Ensembl:ENSDART00000113101
Bgee:E7F1C4 Uniprot:E7F1C4
Length = 954
Score = 242 (90.2 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 51/103 (49%), Positives = 62/103 (60%)
Query: 94 QPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHC 153
QP L T QL YQL G+NWL + ILADEMGLGKTIQ I+FL L++EG+
Sbjct: 419 QPEILSST-FQLKPYQLIGLNWLVLLHQNKLSGILADEMGLGKTIQAISFLAHLYQEGN- 476
Query: 154 KGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLR 196
GP L++ P ST+ NW RE W P F V+ Y G D R +R
Sbjct: 477 HGPHLITVPASTLDNWVRELNLWCPSFKVLVYYGSADDRKYMR 519
>WB|WBGene00010845 [details] [associations]
symbol:M03C11.8 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0003677 GO:GO:0006281 GO:GO:0016568 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K14439
GeneTree:ENSGT00630000089890 EMBL:Z49128 EMBL:AL021171 PIR:T23046
RefSeq:NP_499301.2 ProteinModelPortal:G5EDG2 SMR:G5EDG2
EnsemblMetazoa:M03C11.8 GeneID:176462 KEGG:cel:CELE_M03C11.8
WormBase:M03C11.8 OMA:KEERYMA NextBio:892680 Uniprot:G5EDG2
Length = 989
Score = 221 (82.9 bits), Expect = 6.1e-19, Sum P(2) = 6.1e-19
Identities = 48/103 (46%), Positives = 61/103 (59%)
Query: 94 QPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHC 153
Q P L + G LH YQL G+ WL + ++++ IL DEMGLGKTIQ + FL S K+
Sbjct: 384 QLPLLKE-GCTLHDYQLIGVKWLIMMYNKDLNAILGDEMGLGKTIQIVAFL-SYLKQIGK 441
Query: 154 KGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLR 196
GP L+ P STI NW EF W P ++TY G +D R LR
Sbjct: 442 TGPHLIVVPSSTIENWIGEFHKWCPSIQLLTYYGSQDERKHLR 484
Score = 45 (20.9 bits), Expect = 6.1e-19, Sum P(2) = 6.1e-19
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 60 ELQEDEDGASGSKPRRYTPPPEKPTTDLRKKYEKQ 94
E ED+D PR+ P +K R+ Y ++
Sbjct: 95 EEDEDDDDYEEEGPRKRKAPSKKKLVYPRENYRRE 129
>ASPGD|ASPL0000048785 [details] [associations]
symbol:AN1956 species:162425 "Emericella nidulans"
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0033553 "rDNA
heterochromatin" evidence=IEA] [GO:0044732 "mitotic spindle pole
body" evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0031934 "mating-type region heterochromatin"
evidence=IEA] [GO:0031933 "telomeric heterochromatin" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0030466 "chromatin silencing at silent mating-type cassette"
evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
evidence=IEA] [GO:0016584 "nucleosome positioning" evidence=IEA]
[GO:0030702 "chromatin silencing at centromere" evidence=IEA]
InterPro:IPR000014 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00091 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 EMBL:BN001307 GO:GO:0008270 GO:GO:0004871
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786 PROSITE:PS01359
EMBL:AACD01000029 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
OrthoDB:EOG4GQTD1 RefSeq:XP_659560.1 ProteinModelPortal:Q5BBX4
EnsemblFungi:CADANIAT00008616 GeneID:2875239 KEGG:ani:AN1956.2
HOGENOM:HOG000192830 OMA:SFARVWA Uniprot:Q5BBX4
Length = 1443
Score = 240 (89.5 bits), Expect = 9.1e-19, P = 9.1e-19
Identities = 48/112 (42%), Positives = 67/112 (59%)
Query: 89 KKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLF 148
K E QP + TG ++ YQ +G+NWL + W + + ILADEMGLGKTIQ I L +L
Sbjct: 592 KSREAQPRIM--TGGEIMDYQRDGLNWLYFKWFKQQNAILADEMGLGKTIQVIGLLATLV 649
Query: 149 KEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDI 200
++ C PFL+ P ST NW +E +TW P VTY G R + ++H++
Sbjct: 650 QDHKC-WPFLIVVPNSTCPNWRKELKTWVPSLRAVTYYGSSLARKMAQEHEM 700
>RGD|1311935 [details] [associations]
symbol:Chd1l "chromodomain helicase DNA binding protein 1-like"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0006200 "ATP catabolic process" evidence=ISO]
[GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 RGD:1311935 GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003677
GO:GO:0006974 GO:GO:0016887 GO:GO:0006338 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589
PROSITE:PS51154 OrthoDB:EOG4SXNBV GeneTree:ENSGT00670000098110
IPI:IPI00560655 Ensembl:ENSRNOT00000043937 UCSC:RGD:1311935
ArrayExpress:D4ACG6 Uniprot:D4ACG6
Length = 903
Score = 236 (88.1 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 52/104 (50%), Positives = 65/104 (62%)
Query: 101 TGMQLHAYQLEGINWLRYSW-GQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLV 159
TG++L +YQLEG+NWL + GQN IL DEMGLGKT QTI L L + +GPFL+
Sbjct: 36 TGIRLRSYQLEGVNWLVQCFHGQN-GCILGDEMGLGKTCQTIALLIYLVGRLNDEGPFLI 94
Query: 160 SAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWE 203
PLS + NW+ E E +AP VTY GDK+ R R D+ E
Sbjct: 95 LCPLSVLSNWKEEMERFAPGLSCVTYTGDKEER-ARRQQDLRQE 137
>MGI|MGI:95453 [details] [associations]
symbol:Smarcad1 "SWI/SNF-related, matrix-associated
actin-dependent regulator of chromatin, subfamily a, containing
DEAD/H box 1" species:10090 "Mus musculus" [GO:0000018 "regulation
of DNA recombination" evidence=ISS] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000729 "DNA double-strand break
processing" evidence=ISO] [GO:0000792 "heterochromatin"
evidence=IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=ISO] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=ISO] [GO:0043596 "nuclear replication fork" evidence=ISO]
[GO:0051304 "chromosome separation" evidence=ISO] [GO:0070932
"histone H3 deacetylation" evidence=ISO] [GO:0070933 "histone H4
deacetylation" evidence=ISO] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 MGI:MGI:95453 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0043596 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0043044 GO:GO:0000792 GO:GO:0070932 GO:GO:0070933
GO:GO:0000729 GO:GO:0000018 HOGENOM:HOG000172362 GO:GO:0035861
KO:K14439 GeneTree:ENSGT00630000089890 GO:GO:0051304 OMA:KNQRGIQ
CTD:56916 HOVERGEN:HBG055804 EMBL:X69942 EMBL:AK122454
EMBL:BC042442 EMBL:AK134442 EMBL:AK147884 IPI:IPI00223926
IPI:IPI00556837 PIR:A56559 RefSeq:NP_001240321.1 RefSeq:NP_031984.1
UniGene:Mm.99113 ProteinModelPortal:Q04692 SMR:Q04692 STRING:Q04692
PhosphoSite:Q04692 PaxDb:Q04692 PRIDE:Q04692
Ensembl:ENSMUST00000031984 GeneID:13990 KEGG:mmu:13990
UCSC:uc009ced.1 UCSC:uc012emw.1 InParanoid:Q04692 OrthoDB:EOG4RV2QW
NextBio:284868 Bgee:Q04692 Genevestigator:Q04692
GermOnline:ENSMUSG00000029920 Uniprot:Q04692
Length = 1021
Score = 229 (85.7 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 48/106 (45%), Positives = 63/106 (59%)
Query: 91 YEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKE 150
+ ++ P L + + L YQ G+NWL ++ ILADEMGLGKTIQ I FL LF+E
Sbjct: 478 WNREQPSLLNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLFQE 537
Query: 151 GHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLR 196
G+ KGP L+ P STI NW RE W P V+ Y G ++ R +R
Sbjct: 538 GN-KGPHLIVVPASTIDNWLREVNLWCPSLNVLCYYGSQEERKQIR 582
Score = 34 (17.0 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 10/36 (27%), Positives = 14/36 (38%)
Query: 61 LQEDEDGASGSKPRRYTPPPEKPTTDLRKKYEKQPP 96
L +E+ A G R TP + T +PP
Sbjct: 38 LSAEEENAEGEGSRANTPDSDV-TEKTEDSSVPEPP 72
>ASPGD|ASPL0000042729 [details] [associations]
symbol:AN2278 species:162425 "Emericella nidulans"
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0016586 "RSC complex" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194
SMART:SM00297 SMART:SM00490 SMART:SM00951 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 EMBL:BN001307
GO:GO:0004386 EMBL:AACD01000038 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
HOGENOM:HOG000172362 KO:K11786 OrthoDB:EOG4D565R RefSeq:XP_659882.1
ProteinModelPortal:Q5BB02 STRING:Q5BB02
EnsemblFungi:CADANIAT00008970 GeneID:2875521 KEGG:ani:AN2278.2
OMA:GSDHSSP Uniprot:Q5BB02
Length = 1407
Score = 238 (88.8 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 55/143 (38%), Positives = 77/143 (53%)
Query: 63 EDEDGASGSKPR---RYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYS 119
+DED ASGS R ++++ +QP L G L YQ++G+ W+
Sbjct: 494 DDEDIASGSDEEGEGRRKIDYYAVAHRIKEEITEQPSIL--VGGTLKEYQMKGLQWMISL 551
Query: 120 WGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPD 179
+ N++ ILADEMGLGKTIQTI+ + + + GPFLV PLST+ NW EFE WAP
Sbjct: 552 YNNNLNGILADEMGLGKTIQTISLITHIIERKRNNGPFLVIVPLSTLTNWNLEFEKWAPS 611
Query: 180 FYVVTYVGDKDCRIVLRDHDISW 202
+ Y G + R + +I W
Sbjct: 612 VSRIVYKGPPNAR-KQQQQNIRW 633
>CGD|CAL0005422 [details] [associations]
symbol:ISW2 species:5476 "Candida albicans" [GO:0001410
"chlamydospore formation" evidence=IMP] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0071280 "cellular response to copper ion"
evidence=IMP] [GO:0035690 "cellular response to drug" evidence=IMP]
[GO:0008623 "CHRAC" evidence=IEA] [GO:0060195 "negative regulation
of antisense RNA transcription" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0000183 "chromatin
silencing at rDNA" evidence=IEA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=IEA] [GO:0046020 "negative
regulation of transcription from RNA polymerase II promoter by
pheromones" evidence=IEA] [GO:0006348 "chromatin silencing at
telomere" evidence=IEA] [GO:0016584 "nucleosome positioning"
evidence=IEA] [GO:0015616 "DNA translocase activity" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 CGD:CAL0005422 GO:GO:0005524
GO:GO:0001410 GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0071280 GO:GO:0035690 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0004386 EMBL:AACQ01000074 GO:GO:0030447 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 SUPFAM:SSF101224 RefSeq:XP_716066.1
ProteinModelPortal:Q5A310 STRING:Q5A310 GeneID:3642235
KEGG:cal:CaO19.7401 Uniprot:Q5A310
Length = 1056
Score = 236 (88.1 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 49/106 (46%), Positives = 67/106 (63%)
Query: 93 KQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGH 152
+ P ++ + G +L YQ++G+NWL + + ILADEMGLGKT+QTI+FL L H
Sbjct: 129 ESPSYIKE-G-KLREYQIQGLNWLISLYENRLSGILADEMGLGKTLQTISFLGYLRYIKH 186
Query: 153 CKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRI-VLRD 197
GPF+V P ST+ NW REF W PD VV GDK+ R +++D
Sbjct: 187 IDGPFIVIVPKSTLDNWRREFAKWTPDVNVVVLQGDKEQRASIIKD 232
>UNIPROTKB|Q5A310 [details] [associations]
symbol:ISW2 "Putative uncharacterized protein ISW2"
species:237561 "Candida albicans SC5314" [GO:0001410 "chlamydospore
formation" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0035690 "cellular response to drug" evidence=IMP]
[GO:0071280 "cellular response to copper ion" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 CGD:CAL0005422 GO:GO:0005524
GO:GO:0001410 GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0071280 GO:GO:0035690 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0004386 EMBL:AACQ01000074 GO:GO:0030447 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 SUPFAM:SSF101224 RefSeq:XP_716066.1
ProteinModelPortal:Q5A310 STRING:Q5A310 GeneID:3642235
KEGG:cal:CaO19.7401 Uniprot:Q5A310
Length = 1056
Score = 236 (88.1 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 49/106 (46%), Positives = 67/106 (63%)
Query: 93 KQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGH 152
+ P ++ + G +L YQ++G+NWL + + ILADEMGLGKT+QTI+FL L H
Sbjct: 129 ESPSYIKE-G-KLREYQIQGLNWLISLYENRLSGILADEMGLGKTLQTISFLGYLRYIKH 186
Query: 153 CKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRI-VLRD 197
GPF+V P ST+ NW REF W PD VV GDK+ R +++D
Sbjct: 187 IDGPFIVIVPKSTLDNWRREFAKWTPDVNVVVLQGDKEQRASIIKD 232
>RGD|1309640 [details] [associations]
symbol:Smarcad1 "SWI/SNF-related, matrix-associated
actin-dependent regulator of chromatin, subfamily a, containing
DEAD/H box 1`" species:10116 "Rattus norvegicus" [GO:0000018
"regulation of DNA recombination" evidence=IEA;ISO] [GO:0000729
"DNA double-strand break processing" evidence=ISO;ISS] [GO:0000792
"heterochromatin" evidence=ISO;ISS] [GO:0003677 "DNA binding"
evidence=IEA;ISO] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;ISS] [GO:0035861 "site of double-strand break"
evidence=ISO;ISS] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=ISO;ISS] [GO:0043596 "nuclear replication fork"
evidence=IEA;ISO] [GO:0051304 "chromosome separation"
evidence=ISO;ISS] [GO:0070932 "histone H3 deacetylation"
evidence=ISO;ISS] [GO:0070933 "histone H4 deacetylation"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140 PROSITE:PS51194
SMART:SM00490 RGD:1309640 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043044 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0000729 GO:GO:0000018 GO:GO:0035861 KO:K14439
GeneTree:ENSGT00630000089890 GO:GO:0051304 OMA:KNQRGIQ CTD:56916
OrthoDB:EOG4RV2QW EMBL:AABR03032021 IPI:IPI00765483
RefSeq:NP_001101334.2 UniGene:Rn.7758 ProteinModelPortal:D3Z9Z9
Ensembl:ENSRNOT00000008585 GeneID:312398 KEGG:rno:312398
UCSC:RGD:1309640 Uniprot:D3Z9Z9
Length = 1024
Score = 227 (85.0 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 49/104 (47%), Positives = 63/104 (60%)
Query: 93 KQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGH 152
+QP L+ + + L YQ G+NWL ++ ILADEMGLGKTIQ I FL LF+EG+
Sbjct: 484 EQPSLLNQS-LSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLFQEGN 542
Query: 153 CKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLR 196
KGP L+ P STI NW RE W P V+ Y G ++ R +R
Sbjct: 543 -KGPHLIVVPASTIDNWLREVNLWCPTLNVLCYYGSQEERKQIR 585
Score = 35 (17.4 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 11/35 (31%), Positives = 15/35 (42%)
Query: 62 QEDE--DGASGSKPRRYTPPPEKPTTDLRKKYEKQ 94
+EDE D S KPR + + +EKQ
Sbjct: 217 EEDEANDDQSLKKPRGDRREESNESAEASSNWEKQ 251
Score = 34 (17.0 bits), Expect = 2.2e-18, Sum P(2) = 2.2e-18
Identities = 10/36 (27%), Positives = 14/36 (38%)
Query: 61 LQEDEDGASGSKPRRYTPPPEKPTTDLRKKYEKQPP 96
L +E+ A G R TP + T +PP
Sbjct: 38 LSAEEENAEGEVSRANTPDSDV-TEKTEDSSVPEPP 72
>ASPGD|ASPL0000052010 [details] [associations]
symbol:AN1255 species:162425 "Emericella nidulans"
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0031934 "mating-type region
heterochromatin" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0000070
"mitotic sister chromatid segregation" evidence=IEA] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IEA]
[GO:0060303 "regulation of nucleosome density" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 EMBL:BN001308 GO:GO:0003677 EMBL:AACD01000017
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
KO:K11367 HOGENOM:HOG000207917 OrthoDB:EOG4TF3TB RefSeq:XP_658859.1
ProteinModelPortal:Q5BDX5 STRING:Q5BDX5
EnsemblFungi:CADANIAT00001368 GeneID:2877029 KEGG:ani:AN1255.2
OMA:GPRRMAI Uniprot:Q5BDX5
Length = 1517
Score = 237 (88.5 bits), Expect = 2.0e-18, P = 2.0e-18
Identities = 48/124 (38%), Positives = 78/124 (62%)
Query: 88 RKKYEK---QPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFL 144
RK +E P FL + G QL +Q++G+N++ ++W +N + +LADEMGLGKT+QT+ F+
Sbjct: 428 RKPFEPIKGTPSFLHN-G-QLKEFQVKGVNFMAFNWVKNRNVVLADEMGLGKTVQTVAFI 485
Query: 145 YSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWED 204
L +GPF+V PLST+ +W F+ W+PD V Y G++ R VL+++++ +
Sbjct: 486 SWLRHVRRQQGPFVVVVPLSTMPSWAETFDNWSPDLNYVVYNGNEASRNVLKEYELMVDG 545
Query: 205 TANR 208
R
Sbjct: 546 NPRR 549
>SGD|S000001388 [details] [associations]
symbol:STH1 "ATPase component of the RSC chromatin remodeling
complex" species:4932 "Saccharomyces cerevisiae" [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0007126 "meiosis" evidence=IMP]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA;IDA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;IMP] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0070577 "histone
acetyl-lysine binding" evidence=IDA] [GO:0006337 "nucleosome
disassembly" evidence=IDA] [GO:0016584 "nucleosome positioning"
evidence=IMP] [GO:0007010 "cytoskeleton organization"
evidence=IGI;IMP] [GO:0031055 "chromatin remodeling at centromere"
evidence=IMP] [GO:0007059 "chromosome segregation" evidence=IGI]
[GO:0016586 "RSC complex" evidence=IDA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IDA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000086 "G2/M transition of mitotic cell cycle" evidence=IMP]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IMP] [GO:0015616 "DNA translocase activity" evidence=IDA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SGD:S000001388 GO:GO:0005524 GO:GO:0007126 GO:GO:0000086
GO:GO:0007010 GO:GO:0007059 GO:GO:0000775 GO:GO:0006355
EMBL:BK006942 GO:GO:0006302 GO:GO:0004386 GO:GO:0006368
GO:GO:0006337 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016586 GO:GO:0043044 GO:GO:0016584
EMBL:DQ115392 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
GO:GO:0070577 InterPro:IPR018359 EMBL:Z46833 InterPro:IPR014012
PROSITE:PS51204 GeneTree:ENSGT00670000098110 HOGENOM:HOG000172362
GO:GO:0015616 GO:GO:0031055 KO:K11786 OrthoDB:EOG4D565R EMBL:D10595
EMBL:M83755 PIR:S49883 RefSeq:NP_012140.1 ProteinModelPortal:P32597
SMR:P32597 DIP:DIP-5889N IntAct:P32597 MINT:MINT-615490
STRING:P32597 PaxDb:P32597 PeptideAtlas:P32597 EnsemblFungi:YIL126W
GeneID:854680 KEGG:sce:YIL126W CYGD:YIL126w OMA:MEDFLRM
NextBio:977286 Genevestigator:P32597 GermOnline:YIL126W
Uniprot:P32597
Length = 1359
Score = 236 (88.1 bits), Expect = 2.3e-18, P = 2.3e-18
Identities = 51/114 (44%), Positives = 69/114 (60%)
Query: 87 LRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYS 146
+++K +KQP L G L YQL G+ W+ + +++ ILADEMGLGKTIQ+I+ +
Sbjct: 454 IKEKIDKQPSIL--VGGTLKEYQLRGLEWMVSLYNNHLNGILADEMGLGKTIQSISLITY 511
Query: 147 LFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDI 200
L++ GPFLV PLSTI NW EFE WAP + Y G + R L+ H I
Sbjct: 512 LYEVKKDIGPFLVIVPLSTITNWTLEFEKWAPSLNTIIYKGTPNQRHSLQ-HQI 564
>POMBASE|SPAC1250.01 [details] [associations]
symbol:snf21 "ATP-dependent DNA helicase Snf21"
species:4896 "Schizosaccharomyces pombe" [GO:0000790 "nuclear
chromatin" evidence=IC] [GO:0000991 "core RNA polymerase II binding
transcription factor activity" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IC] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=ISO] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0016586 "RSC complex"
evidence=IDA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 PomBase:SPAC1250.01 GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0006338 GO:GO:0000790
GO:GO:0004003 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016586 GO:GO:0000991 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 HOGENOM:HOG000172362
KO:K11786 EMBL:AB162438 PIR:T37561 RefSeq:NP_594861.1
ProteinModelPortal:Q9UTN6 DIP:DIP-48388N STRING:Q9UTN6
EnsemblFungi:SPAC1250.01.1 GeneID:2542638 KEGG:spo:SPAC1250.01
OMA:WAPSISA OrthoDB:EOG4D565R NextBio:20803687 Uniprot:Q9UTN6
Length = 1199
Score = 235 (87.8 bits), Expect = 2.4e-18, P = 2.4e-18
Identities = 48/110 (43%), Positives = 65/110 (59%)
Query: 86 DLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLY 145
++R+ +QP L G +L YQL G+ W+ + +++ ILADEMGLGKTIQTI+ +
Sbjct: 400 NIREVVTEQPSIL--VGGKLKEYQLRGLQWMISLYNNHLNGILADEMGLGKTIQTISLIT 457
Query: 146 SLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVL 195
L ++ GPFLV PLST+ NW EFE WAP + Y G R L
Sbjct: 458 HLIEKKRQNGPFLVIVPLSTLTNWTMEFERWAPSIVKIVYKGPPQVRKAL 507
>CGD|CAL0000801 [details] [associations]
symbol:orf19.1720 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0006312 "mitotic
recombination" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
CGD:CAL0000801 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
EMBL:AACQ01000014 EMBL:AACQ01000013 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 RefSeq:XP_721671.1
RefSeq:XP_721791.1 ProteinModelPortal:Q5AJ72 GeneID:3636620
GeneID:3636670 KEGG:cal:CaO19.1720 KEGG:cal:CaO19.9288
Uniprot:Q5AJ72
Length = 864
Score = 224 (83.9 bits), Expect = 2.8e-18, Sum P(2) = 2.8e-18
Identities = 53/128 (41%), Positives = 71/128 (55%)
Query: 81 EKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQT 140
EK + KQP + TG QL YQ++G+ WL + ++ ILADEMGLGKT+Q
Sbjct: 153 EKSQNSSKITNNKQPKLI--TGGQLKDYQMDGLEWLITLFQNGLNGILADEMGLGKTLQC 210
Query: 141 ITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDI 200
I+FL L + G GPFLV P+ST+ NW E +AP V Y+G K R D D+
Sbjct: 211 ISFLSHLIENG-INGPFLVVVPVSTLSNWYNEIRKFAPKIKVTKYIGTKQER---NDIDL 266
Query: 201 -SWEDTAN 207
++T N
Sbjct: 267 LQQQETTN 274
Score = 34 (17.0 bits), Expect = 2.8e-18, Sum P(2) = 2.8e-18
Identities = 8/24 (33%), Positives = 11/24 (45%)
Query: 63 EDEDGASGSKPRRYTPPPEKPTTD 86
++E K RR T P K T +
Sbjct: 105 KNESDTQPIKKRRKTKPKSKSTAN 128
>UNIPROTKB|Q5AJ72 [details] [associations]
symbol:CaO19.1720 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 CGD:CAL0000801 GO:GO:0005524 GO:GO:0003677
GO:GO:0004386 EMBL:AACQ01000014 EMBL:AACQ01000013 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 RefSeq:XP_721671.1
RefSeq:XP_721791.1 ProteinModelPortal:Q5AJ72 GeneID:3636620
GeneID:3636670 KEGG:cal:CaO19.1720 KEGG:cal:CaO19.9288
Uniprot:Q5AJ72
Length = 864
Score = 224 (83.9 bits), Expect = 2.8e-18, Sum P(2) = 2.8e-18
Identities = 53/128 (41%), Positives = 71/128 (55%)
Query: 81 EKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQT 140
EK + KQP + TG QL YQ++G+ WL + ++ ILADEMGLGKT+Q
Sbjct: 153 EKSQNSSKITNNKQPKLI--TGGQLKDYQMDGLEWLITLFQNGLNGILADEMGLGKTLQC 210
Query: 141 ITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDI 200
I+FL L + G GPFLV P+ST+ NW E +AP V Y+G K R D D+
Sbjct: 211 ISFLSHLIENG-INGPFLVVVPVSTLSNWYNEIRKFAPKIKVTKYIGTKQER---NDIDL 266
Query: 201 -SWEDTAN 207
++T N
Sbjct: 267 LQQQETTN 274
Score = 34 (17.0 bits), Expect = 2.8e-18, Sum P(2) = 2.8e-18
Identities = 8/24 (33%), Positives = 11/24 (45%)
Query: 63 EDEDGASGSKPRRYTPPPEKPTTD 86
++E K RR T P K T +
Sbjct: 105 KNESDTQPIKKRRKTKPKSKSTAN 128
>UNIPROTKB|I3LTT5 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00680000100002 EMBL:CU695129
Ensembl:ENSSSCT00000027860 Uniprot:I3LTT5
Length = 778
Score = 231 (86.4 bits), Expect = 3.4e-18, P = 3.4e-18
Identities = 48/117 (41%), Positives = 69/117 (58%)
Query: 82 KPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTI 141
+ T+++ ++E P ++ G L YQ+ G+NWL + ++ ILADEMGLGKT+QTI
Sbjct: 165 RKTSNVCVRFEVSPSYVK--GGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTI 222
Query: 142 TFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIV-LRD 197
L L + GP +V P ST+ NW EF+ W P V+ +VGDKD R +RD
Sbjct: 223 ALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRD 279
>UNIPROTKB|E2QVR5 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 GO:GO:0003677 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 SUPFAM:SSF101224
Ensembl:ENSCAFT00000029649 Uniprot:E2QVR5
Length = 1073
Score = 233 (87.1 bits), Expect = 3.4e-18, P = 3.4e-18
Identities = 48/117 (41%), Positives = 69/117 (58%)
Query: 82 KPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTI 141
+ T+++ ++E P ++ G L YQ+ G+NWL + ++ ILADEMGLGKT+QTI
Sbjct: 174 RKTSNVCVRFEVSPSYVK--GGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTI 231
Query: 142 TFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIV-LRD 197
L L + GP +V P ST+ NW EF+ W P V+ +VGDKD R +RD
Sbjct: 232 ALLGYLKHYRNIPGPHMVLVPKSTLYNWMNEFKRWVPSLRVICFVGDKDARAAFIRD 288
>UNIPROTKB|F6XTU7 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0031491 "nucleosome binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 GO:GO:0003677 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 GeneTree:ENSGT00680000100002
SUPFAM:SSF101224 OMA:PMSQKRK EMBL:AAEX03026896
Ensembl:ENSCAFT00000029649 Uniprot:F6XTU7
Length = 1075
Score = 233 (87.1 bits), Expect = 3.4e-18, P = 3.4e-18
Identities = 48/117 (41%), Positives = 69/117 (58%)
Query: 82 KPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTI 141
+ T+++ ++E P ++ G L YQ+ G+NWL + ++ ILADEMGLGKT+QTI
Sbjct: 162 RKTSNVCVRFEVSPSYVK--GGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTI 219
Query: 142 TFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIV-LRD 197
L L + GP +V P ST+ NW EF+ W P V+ +VGDKD R +RD
Sbjct: 220 ALLGYLKHYRNIPGPHMVLVPKSTLYNWMNEFKRWVPSLRVICFVGDKDARAAFIRD 276
>UNIPROTKB|F1P5V5 [details] [associations]
symbol:HELLS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000330 Pfam:PF00176
GO:GO:0005524 GO:GO:0003677 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00550000075106 EMBL:AADN02027839
EMBL:AADN02027838 IPI:IPI01017281 Ensembl:ENSGALT00000008747
ArrayExpress:F1P5V5 Uniprot:F1P5V5
Length = 227
Score = 220 (82.5 bits), Expect = 3.6e-18, P = 3.6e-18
Identities = 55/134 (41%), Positives = 74/134 (55%)
Query: 60 ELQEDEDGASGSKPR--RYTPPPEKPTTDLRKKYEKQP-PFLDD---TGMQLHAYQLEGI 113
+LQ++ D S K R + K D +K+ QP PF TG + YQ+EG+
Sbjct: 30 DLQKNGDSNSVIKDRLCQAVRHSAKQFLDPVRKFNGQPVPFQQPKIFTGGVMRWYQVEGM 89
Query: 114 NWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREF 173
WLR W I+ ILADEMGLGKTIQ I + + + G GPFLV PLST+ NW EF
Sbjct: 90 EWLRMLWENGINGILADEMGLGKTIQCIATIALMVERG-VPGPFLVCGPLSTLPNWMSEF 148
Query: 174 ETWAPDFYVVTYVG 187
+ + P+ ++ Y G
Sbjct: 149 KRFTPEIPLMLYHG 162
>WB|WBGene00016868 [details] [associations]
symbol:C52B9.8 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K11647 GeneTree:ENSGT00550000074659 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 EMBL:FO080644 PIR:T28937 RefSeq:NP_508736.1
ProteinModelPortal:Q22944 SMR:Q22944 STRING:Q22944 PaxDb:Q22944
EnsemblMetazoa:C52B9.8 GeneID:180705 KEGG:cel:CELE_C52B9.8
UCSC:C52B9.8 CTD:180705 WormBase:C52B9.8 InParanoid:Q22944
NextBio:910548 Uniprot:Q22944
Length = 1336
Score = 234 (87.4 bits), Expect = 3.6e-18, P = 3.6e-18
Identities = 43/92 (46%), Positives = 62/92 (67%)
Query: 103 MQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAP 162
++L YQ++G+ W+ + N++ ILADEMGLGKTIQTI F+ L + GPFLV P
Sbjct: 364 LKLKPYQIKGLEWMVSLFNNNLNGILADEMGLGKTIQTIAFITYLMEIKKTSGPFLVIVP 423
Query: 163 LSTIINWEREFETWAPDFYVVTYVGDKDCRIV 194
LST+ NW+ EF+ WA + +++ Y G K+ R V
Sbjct: 424 LSTVPNWQNEFDKWAANVHLIAYKGPKETRKV 455
>POMBASE|SPBP35G2.10 [details] [associations]
symbol:mit1 "SHREC complex subunit Mit1" species:4896
"Schizosaccharomyces pombe" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0000183 "chromatin silencing at rDNA" evidence=IMP] [GO:0000790
"nuclear chromatin" evidence=IC] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISM] [GO:0005524 "ATP binding" evidence=ISM;IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005721 "centromeric
heterochromatin" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0006342 "chromatin silencing" evidence=IMP]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016584
"nucleosome positioning" evidence=IMP] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0019787 "small conjugating protein
ligase activity" evidence=ISM] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=IMP] [GO:0030702 "chromatin
silencing at centromere" evidence=IMP] [GO:0031933 "telomeric
heterochromatin" evidence=IDA] [GO:0031934 "mating-type region
heterochromatin" evidence=IDA] [GO:0033553 "rDNA heterochromatin"
evidence=IDA] [GO:0044732 "mitotic spindle pole body" evidence=IDA]
[GO:0070824 "SHREC complex" evidence=IDA] InterPro:IPR001841
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00490 PomBase:SPBP35G2.10 Prosite:PS00518 GO:GO:0005524
GO:GO:0044732 GO:GO:0046872 GO:GO:0003677 EMBL:CU329671
GO:GO:0008270 GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0030466
GO:GO:0000122 GO:GO:0000790 GO:GO:0030702 GO:GO:0000183
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004003 InterPro:IPR019786 PROSITE:PS01359
GO:GO:0005721 GO:GO:0031934 InterPro:IPR016197 SUPFAM:SSF54160
HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016584 GO:GO:0019787 GO:GO:0033553
GO:GO:0016581 GO:GO:0031933 RefSeq:NP_595385.1
ProteinModelPortal:Q9P793 STRING:Q9P793 EnsemblFungi:SPBP35G2.10.1
GeneID:2541336 KEGG:spo:SPBP35G2.10 OrthoDB:EOG4GQTD1
NextBio:20802445 Uniprot:Q9P793
Length = 1418
Score = 233 (87.1 bits), Expect = 5.0e-18, P = 5.0e-18
Identities = 51/116 (43%), Positives = 69/116 (59%)
Query: 83 PTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTIT 142
P T+L ++ QP F+ G L YQL+G+NWL W + ILADEMGLGKT+Q I+
Sbjct: 538 PFTNL--EWHSQPSFIK--GGTLMPYQLKGLNWLYLRWYTHHPCILADEMGLGKTVQVIS 593
Query: 143 FLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDH 198
F+ LF C P LV P +T+ NWERE + WAP + VG + R ++RD+
Sbjct: 594 FISVLFYRHKCF-PVLVIVPHATVANWERELKKWAPFLQINVLVGSEKNRSLVRDY 648
>UNIPROTKB|K7GMM0 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0031491
"nucleosome binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 EMBL:CU695129
GeneID:100188905 RefSeq:XP_003360491.1 Ensembl:ENSSSCT00000034062
Uniprot:K7GMM0
Length = 1057
Score = 231 (86.4 bits), Expect = 5.5e-18, P = 5.5e-18
Identities = 48/117 (41%), Positives = 69/117 (58%)
Query: 82 KPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTI 141
+ T+++ ++E P ++ G L YQ+ G+NWL + ++ ILADEMGLGKT+QTI
Sbjct: 165 RKTSNVCVRFEVSPSYVK--GGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTI 222
Query: 142 TFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIV-LRD 197
L L + GP +V P ST+ NW EF+ W P V+ +VGDKD R +RD
Sbjct: 223 ALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRD 279
>UNIPROTKB|K7GNV1 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0031491
"nucleosome binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 EMBL:CU695129
GeneID:100188905 RefSeq:XP_003360492.1 Ensembl:ENSSSCT00000032734
Uniprot:K7GNV1
Length = 1061
Score = 231 (86.4 bits), Expect = 5.5e-18, P = 5.5e-18
Identities = 48/117 (41%), Positives = 69/117 (58%)
Query: 82 KPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTI 141
+ T+++ ++E P ++ G L YQ+ G+NWL + ++ ILADEMGLGKT+QTI
Sbjct: 165 RKTSNVCVRFEVSPSYVK--GGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTI 222
Query: 142 TFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIV-LRD 197
L L + GP +V P ST+ NW EF+ W P V+ +VGDKD R +RD
Sbjct: 223 ALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRD 279
>MGI|MGI:1915308 [details] [associations]
symbol:Chd1l "chromodomain helicase DNA binding protein
1-like" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=ISO]
[GO:0006974 "response to DNA damage stimulus" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
MGI:MGI:1915308 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000166 GO:GO:0003677 GO:GO:0006281
GO:GO:0006974 GO:GO:0016887 GO:GO:0006338 GO:GO:0004386 HSSP:Q97XQ5
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR002589 PROSITE:PS51154 CTD:9557 HOGENOM:HOG000030789
HOVERGEN:HBG077542 OrthoDB:EOG4SXNBV OMA:TCQTIAL ChiTaRS:CHD1L
EMBL:AK014473 EMBL:AK165656 EMBL:BC052385 EMBL:BC057567
EMBL:BC062966 IPI:IPI00466859 IPI:IPI00890897 RefSeq:NP_080815.1
UniGene:Mm.41447 ProteinModelPortal:Q9CXF7 SMR:Q9CXF7
DIP:DIP-58953N STRING:Q9CXF7 PhosphoSite:Q9CXF7 PaxDb:Q9CXF7
PRIDE:Q9CXF7 Ensembl:ENSMUST00000029730 GeneID:68058 KEGG:mmu:68058
UCSC:uc008qow.1 UCSC:uc008qox.1 GeneTree:ENSGT00670000098110
InParanoid:Q9CXF7 NextBio:326336 Bgee:Q9CXF7 Genevestigator:Q9CXF7
Uniprot:Q9CXF7
Length = 900
Score = 230 (86.0 bits), Expect = 5.5e-18, P = 5.5e-18
Identities = 57/128 (44%), Positives = 71/128 (55%)
Query: 79 PPEKPTTDLRKKYEKQPPFLDD---TGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLG 135
P E LR + Q P L TG++L +YQLEG+NWL + IL DEMGLG
Sbjct: 13 PAEHGPEPLRTRV--QEPDLQQWGLTGIRLRSYQLEGVNWLVQCFHCQNGCILGDEMGLG 70
Query: 136 KTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVL 195
KT QTI L L + +GPFLV PLS + NW+ E E +AP VTY GDK+ R L
Sbjct: 71 KTCQTIALLIYLVGRLNDEGPFLVLCPLSVLSNWKEEMERFAPGLSCVTYTGDKEERARL 130
Query: 196 RDHDISWE 203
+ D+ E
Sbjct: 131 QQ-DLRQE 137
>UNIPROTKB|F1RTI9 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0036310 "annealing helicase
activity" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0007420 "brain
development" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
GO:GO:0007420 GO:GO:0030182 GO:GO:0003677 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016589
GO:GO:0008094 GeneTree:ENSGT00680000100002 SUPFAM:SSF101224
OMA:PMSQKRK EMBL:CU695129 Ensembl:ENSSSCT00000013830 Uniprot:F1RTI9
Length = 1073
Score = 231 (86.4 bits), Expect = 5.6e-18, P = 5.6e-18
Identities = 48/117 (41%), Positives = 69/117 (58%)
Query: 82 KPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTI 141
+ T+++ ++E P ++ G L YQ+ G+NWL + ++ ILADEMGLGKT+QTI
Sbjct: 165 RKTSNVCVRFEVSPSYVK--GGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTI 222
Query: 142 TFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIV-LRD 197
L L + GP +V P ST+ NW EF+ W P V+ +VGDKD R +RD
Sbjct: 223 ALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRD 279
>UNIPROTKB|K7GLQ2 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0031491
"nucleosome binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 EMBL:CU695129
RefSeq:XP_003135410.1 Ensembl:ENSSSCT00000033549 GeneID:100188905
Uniprot:K7GLQ2
Length = 1073
Score = 231 (86.4 bits), Expect = 5.6e-18, P = 5.6e-18
Identities = 48/117 (41%), Positives = 69/117 (58%)
Query: 82 KPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTI 141
+ T+++ ++E P ++ G L YQ+ G+NWL + ++ ILADEMGLGKT+QTI
Sbjct: 165 RKTSNVCVRFEVSPSYVK--GGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTI 222
Query: 142 TFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIV-LRD 197
L L + GP +V P ST+ NW EF+ W P V+ +VGDKD R +RD
Sbjct: 223 ALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRD 279
>UNIPROTKB|F1N166 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0036310 "annealing helicase
activity" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0007420 "brain
development" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
GO:GO:0007420 GO:GO:0030182 GO:GO:0003677 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016589
GO:GO:0008094 GeneTree:ENSGT00680000100002 SUPFAM:SSF101224
OMA:PMSQKRK EMBL:DAAA02067438 EMBL:DAAA02067437 IPI:IPI01018574
Ensembl:ENSBTAT00000002973 Uniprot:F1N166
Length = 1078
Score = 231 (86.4 bits), Expect = 5.6e-18, P = 5.6e-18
Identities = 48/117 (41%), Positives = 69/117 (58%)
Query: 82 KPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTI 141
+ T+++ ++E P ++ G L YQ+ G+NWL + ++ ILADEMGLGKT+QTI
Sbjct: 165 RKTSNVCVRFEVSPSYVK--GGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTI 222
Query: 142 TFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIV-LRD 197
L L + GP +V P ST+ NW EF+ W P V+ +VGDKD R +RD
Sbjct: 223 ALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRD 279
>UNIPROTKB|F6TQG2 [details] [associations]
symbol:SMARCA1 "Probable global transcription activator
SNF2L1" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0031491 "nucleosome
binding" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 GO:GO:0003677 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 ChiTaRS:SMARCA1 SUPFAM:SSF101224
EMBL:AL138745 EMBL:AL022577 HGNC:HGNC:11097 IPI:IPI00647510
ProteinModelPortal:F6TQG2 SMR:F6TQG2 PRIDE:F6TQG2
Ensembl:ENST00000450039 ArrayExpress:F6TQG2 Bgee:F6TQG2
Uniprot:F6TQG2
Length = 1005
Score = 230 (86.0 bits), Expect = 6.5e-18, P = 6.5e-18
Identities = 48/117 (41%), Positives = 69/117 (58%)
Query: 82 KPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTI 141
+ T+++ ++E P ++ G L YQ+ G+NWL + ++ ILADEMGLGKT+QTI
Sbjct: 141 RKTSNVCIRFEVSPSYVK--GGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTI 198
Query: 142 TFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIV-LRD 197
L L + GP +V P ST+ NW EF+ W P V+ +VGDKD R +RD
Sbjct: 199 ALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRD 255
>WB|WBGene00004204 [details] [associations]
symbol:swsn-4 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0040010 GO:GO:0006355
GO:GO:0003677 GO:GO:0040035 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 KO:K11647
GeneTree:ENSGT00550000074659 OMA:QKKYTIS InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 EMBL:Z68751 EMBL:Z68341 EMBL:AF230280 PIR:T20488
RefSeq:NP_502082.1 UniGene:Cel.23435 ProteinModelPortal:G5EF53
SMR:G5EF53 EnsemblMetazoa:F01G4.1 GeneID:178015
KEGG:cel:CELE_F01G4.1 CTD:178015 WormBase:F01G4.1 NextBio:899366
Uniprot:G5EF53
Length = 1474
Score = 232 (86.7 bits), Expect = 6.7e-18, P = 6.7e-18
Identities = 46/108 (42%), Positives = 65/108 (60%)
Query: 87 LRKKYEKQPPFLD--DTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFL 144
+++K KQ + D + L YQ++G+ W+ + N++ ILADEMGLGKTIQTI+ +
Sbjct: 513 IKEKVVKQHTTMGGGDPNLLLKPYQIKGLEWMVSLYNNNLNGILADEMGLGKTIQTISLV 572
Query: 145 YSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCR 192
L + GP+LV PLST+ NW+ EF WAP + Y G KD R
Sbjct: 573 TYLMEVKQNNGPYLVIVPLSTLSNWQNEFAKWAPSVTTIIYKGTKDAR 620
>MGI|MGI:1935127 [details] [associations]
symbol:Smarca1 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000733 "DNA strand renaturation" evidence=ISO]
[GO:0000790 "nuclear chromatin" evidence=IDA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006338 "chromatin
remodeling" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0007420 "brain
development" evidence=ISO;IMP] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016589 "NURF complex" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016817 "hydrolase activity,
acting on acid anhydrides" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IMP] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0036310 "annealing helicase activity" evidence=ISO] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISO] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0070615 "nucleosome-dependent ATPase activity" evidence=ISO]
[GO:0090537 "CERF complex" evidence=ISO] [GO:2000177 "regulation of
neural precursor cell proliferation" evidence=IGI;IMP]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 MGI:MGI:1935127 GO:GO:0005524 GO:GO:0005634
GO:GO:0045893 GO:GO:0007420 GO:GO:0030182 GO:GO:0003677
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
GO:GO:0043044 GO:GO:0016589 GO:GO:0036310 GO:GO:0008094
GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862 SUPFAM:SSF101224
CTD:6594 HOVERGEN:HBG056329 KO:K11727 EMBL:AF325920 EMBL:AK030741
EMBL:AL671903 EMBL:BC057115 IPI:IPI00314654 IPI:IPI00761324
RefSeq:NP_444353.3 UniGene:Mm.229151 HSSP:Q24368
ProteinModelPortal:Q6PGB8 SMR:Q6PGB8 STRING:Q6PGB8
PhosphoSite:Q6PGB8 PaxDb:Q6PGB8 PRIDE:Q6PGB8
Ensembl:ENSMUST00000077569 Ensembl:ENSMUST00000088973
Ensembl:ENSMUST00000101616 GeneID:93761 KEGG:mmu:93761
UCSC:uc009tbl.2 UCSC:uc009tbm.2 InParanoid:B1AUP6 OrthoDB:EOG44J2H9
NextBio:351647 Bgee:Q6PGB8 Genevestigator:Q6PGB8
GermOnline:ENSMUSG00000031099 Uniprot:Q6PGB8
Length = 1046
Score = 230 (86.0 bits), Expect = 6.9e-18, P = 6.9e-18
Identities = 48/117 (41%), Positives = 69/117 (58%)
Query: 82 KPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTI 141
+ T+++ ++E P ++ G L YQ+ G+NWL + ++ ILADEMGLGKT+QTI
Sbjct: 166 RKTSNVCVRFEVSPSYVK--GGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTI 223
Query: 142 TFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIV-LRD 197
L L + GP +V P ST+ NW EF+ W P V+ +VGDKD R +RD
Sbjct: 224 ALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDVRAAFIRD 280
>TAIR|locus:2173644 [details] [associations]
symbol:CHR1 "chromatin remodeling 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006349
"regulation of gene expression by genetic imprinting" evidence=IMP]
[GO:0044030 "regulation of DNA methylation" evidence=IMP]
[GO:0051574 "positive regulation of histone H3-K9 methylation"
evidence=IMP] [GO:0000786 "nucleosome" evidence=IDA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IMP] [GO:0016887
"ATPase activity" evidence=IDA] [GO:0090241 "negative regulation of
histone H4 acetylation" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006344 "maintenance of chromatin silencing"
evidence=IMP] [GO:0009294 "DNA mediated transformation"
evidence=IMP] [GO:0032197 "transposition, RNA-mediated"
evidence=IMP] [GO:0006342 "chromatin silencing" evidence=RCA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=IMP;RCA] [GO:0008283 "cell proliferation" evidence=RCA]
[GO:0016246 "RNA interference" evidence=RCA] [GO:0016572 "histone
phosphorylation" evidence=RCA] [GO:0031048 "chromatin silencing by
small RNA" evidence=RCA] [GO:0051567 "histone H3-K9 methylation"
evidence=RCA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0006351 GO:GO:0004003 GO:GO:0006349 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0009294
EMBL:AB018119 GO:GO:0000786 GO:GO:0051574 GO:GO:0044030
GO:GO:0090241 GO:GO:0032197 EMBL:AF143940 EMBL:AY099638
EMBL:BT002161 EMBL:AY699010 EMBL:AY699011 IPI:IPI00524705
RefSeq:NP_201476.1 UniGene:At.28851 ProteinModelPortal:Q9XFH4
SMR:Q9XFH4 STRING:Q9XFH4 PaxDb:Q9XFH4 PRIDE:Q9XFH4
EnsemblPlants:AT5G66750.1 GeneID:836808 KEGG:ath:AT5G66750
TAIR:At5g66750 HOGENOM:HOG000172362 InParanoid:Q9XFH4 OMA:ETFYTAI
PhylomeDB:Q9XFH4 ProtClustDB:CLSN2686877 Genevestigator:Q9XFH4
GO:GO:0006344 GO:GO:0006346 Uniprot:Q9XFH4
Length = 764
Score = 228 (85.3 bits), Expect = 6.9e-18, P = 6.9e-18
Identities = 49/96 (51%), Positives = 60/96 (62%)
Query: 101 TGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVS 160
TG QL +YQL+G+ WL W ++ ILAD+MGLGKTIQTI FL L G GP+LV
Sbjct: 198 TGGQLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLSHLKGNG-LDGPYLVI 256
Query: 161 APLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLR 196
APLST+ NW E + P + Y GDK+ R LR
Sbjct: 257 APLSTLSNWFNEIARFTPSINAIIYHGDKNQRDELR 292
>UNIPROTKB|P28370 [details] [associations]
symbol:SMARCA1 "Probable global transcription activator
SNF2L1" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016589 "NURF complex" evidence=IDA]
[GO:0036310 "annealing helicase activity" evidence=IDA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IDA] [GO:0070615
"nucleosome-dependent ATPase activity" evidence=IDA] [GO:0090537
"CERF complex" evidence=IDA] [GO:0030182 "neuron differentiation"
evidence=ISS] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IDA] [GO:0007420 "brain development" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0006351 "transcription, DNA-dependent"
evidence=IMP] [GO:0000733 "DNA strand renaturation" evidence=IDA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
GO:GO:0007420 GO:GO:0030182 GO:GO:0003677 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044
GO:GO:0016589 GO:GO:0036310 ChiTaRS:SMARCA1 SUPFAM:SSF101224
EMBL:AL138745 EMBL:M88163 EMBL:M89907 EMBL:AL022577 EMBL:BC117447
IPI:IPI00216046 IPI:IPI00646130 PIR:S35457 PIR:S35458
RefSeq:NP_003060.2 RefSeq:NP_620604.2 UniGene:Hs.152292
ProteinModelPortal:P28370 SMR:P28370 IntAct:P28370
MINT:MINT-2802155 STRING:P28370 PhosphoSite:P28370 DMDM:115311627
PaxDb:P28370 PRIDE:P28370 Ensembl:ENST00000371121
Ensembl:ENST00000371122 Ensembl:ENST00000371123 GeneID:6594
KEGG:hsa:6594 UCSC:uc004eun.4 UCSC:uc004eup.4 CTD:6594
GeneCards:GC0XM128580 HGNC:HGNC:11097 HPA:HPA003335 MIM:300012
neXtProt:NX_P28370 PharmGKB:PA35947 HOVERGEN:HBG056329
InParanoid:P28370 KO:K11727 OMA:PMSQKRK PhylomeDB:P28370
GenomeRNAi:6594 NextBio:25645 ArrayExpress:P28370 Bgee:P28370
CleanEx:HS_SMARCA1 Genevestigator:P28370 GermOnline:ENSG00000102038
Uniprot:P28370
Length = 1054
Score = 230 (86.0 bits), Expect = 7.0e-18, P = 7.0e-18
Identities = 48/117 (41%), Positives = 69/117 (58%)
Query: 82 KPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTI 141
+ T+++ ++E P ++ G L YQ+ G+NWL + ++ ILADEMGLGKT+QTI
Sbjct: 162 RKTSNVCIRFEVSPSYVK--GGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTI 219
Query: 142 TFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIV-LRD 197
L L + GP +V P ST+ NW EF+ W P V+ +VGDKD R +RD
Sbjct: 220 ALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRD 276
>TAIR|locus:2150270 [details] [associations]
symbol:CHR23 "chromatin remodeling 23" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006259 "DNA metabolic process" evidence=RCA] [GO:0007062
"sister chromatid cohesion" evidence=RCA] [GO:0007126 "meiosis"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0010388 "cullin deneddylation" evidence=RCA] [GO:0016567
"protein ubiquitination" evidence=RCA] [GO:0016571 "histone
methylation" evidence=RCA] [GO:0016579 "protein deubiquitination"
evidence=RCA] [GO:0031048 "chromatin silencing by small RNA"
evidence=RCA] [GO:0033044 "regulation of chromosome organization"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 EMBL:CP002688 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K11647
OMA:WAPSISA IPI:IPI00536400 RefSeq:NP_197432.2 UniGene:At.43995
ProteinModelPortal:F4K128 SMR:F4K128 PRIDE:F4K128
EnsemblPlants:AT5G19310.1 GeneID:832051 KEGG:ath:AT5G19310
PhylomeDB:F4K128 Uniprot:F4K128
Length = 1064
Score = 230 (86.0 bits), Expect = 7.1e-18, P = 7.1e-18
Identities = 47/110 (42%), Positives = 64/110 (58%)
Query: 87 LRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYS 146
+++K KQP L G +L +YQLEG+ W+ + + + ILADEMGLGKTIQTI +
Sbjct: 370 IQEKVTKQPSLLQ--GGELRSYQLEGLQWMVSLYNNDYNGILADEMGLGKTIQTIALIAY 427
Query: 147 LFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLR 196
L + GP L+ AP + + NWE EF WAP Y G K+ R +R
Sbjct: 428 LLESKDLHGPHLILAPKAVLPNWENEFALWAPSISAFLYDGSKEKRTEIR 477
>POMBASE|SPCC1620.14c [details] [associations]
symbol:snf22 "ATP-dependent DNA helicase Snf22"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0000991 "core RNA polymerase II binding transcription factor
activity" evidence=ISO] [GO:0003677 "DNA binding" evidence=IC]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISM]
[GO:0005524 "ATP binding" evidence=IC] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005819 "spindle" evidence=IDA] [GO:0006338
"chromatin remodeling" evidence=IGI] [GO:0007131 "reciprocal
meiotic recombination" evidence=IMP] [GO:0010972 "negative
regulation of G2/M transition of mitotic cell cycle" evidence=IMP]
[GO:0016514 "SWI/SNF complex" evidence=IDA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEP] [GO:1900389 "regulation of glucose import
by regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:1900400 "regulation of iron ion import by
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR014978 InterPro:IPR017956
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00384
SMART:SM00490 SMART:SM00951 PomBase:SPCC1620.14c GO:GO:0005524
GO:GO:0005819 EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0003677
GO:GO:0045944 GO:GO:0000122 GO:GO:0000790 GO:GO:0016514
GO:GO:0004003 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043044 GO:GO:0000991 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0007131
InterPro:IPR014012 PROSITE:PS51204 GO:GO:0010972
HOGENOM:HOG000172362 KO:K11786 OrthoDB:EOG4D565R EMBL:AB162437
PIR:T41628 RefSeq:NP_588472.2 ProteinModelPortal:O94421
DIP:DIP-48377N STRING:O94421 PRIDE:O94421
EnsemblFungi:SPCC1620.14c.1 GeneID:2538881 KEGG:spo:SPCC1620.14c
NextBio:20800061 GO:GO:1900389 GO:GO:1900400 Uniprot:O94421
Length = 1680
Score = 232 (86.7 bits), Expect = 7.9e-18, P = 7.9e-18
Identities = 47/104 (45%), Positives = 63/104 (60%)
Query: 93 KQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGH 152
+QP G L YQL+G+ W+ + N++ ILADEMGLGKTIQTI F+ L ++ +
Sbjct: 859 EQPKIF--VGGTLKDYQLKGLEWMLSLYNNNLNGILADEMGLGKTIQTIAFITYLIEKKN 916
Query: 153 CKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLR 196
+GPFL+ PLST+ NW EFE WAP + Y G R L+
Sbjct: 917 QQGPFLIIVPLSTLTNWIMEFEKWAPSVKKIAYKGPPQLRKTLQ 960
>UNIPROTKB|D4AA07 [details] [associations]
symbol:Smarca4 "Transcription activator BRG1" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS51194 SMART:SM00490 SMART:SM00592 RGD:621728
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
OrthoDB:EOG418BMJ IPI:IPI00915110 Ensembl:ENSRNOT00000060926
ArrayExpress:D4AA07 Uniprot:D4AA07
Length = 1262
Score = 221 (82.9 bits), Expect = 8.0e-18, Sum P(2) = 8.0e-18
Identities = 45/104 (43%), Positives = 63/104 (60%)
Query: 89 KKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLF 148
++ +KQ + + G+ L YQ++G+ WL + N++ ILADEMGLGKTIQTI + L
Sbjct: 539 ERVDKQSALMVN-GV-LKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLM 596
Query: 149 KEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCR 192
+ GPFL+ PLST+ NW EF+ WAP V+Y G R
Sbjct: 597 EHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAAR 640
Score = 37 (18.1 bits), Expect = 8.0e-18, Sum P(2) = 8.0e-18
Identities = 10/39 (25%), Positives = 19/39 (48%)
Query: 62 QEDEDGASGSKPRRYTPPPEKPTTDLRKKYEKQPPFLDD 100
+E+E+ +P+ P + PT + +K + P DD
Sbjct: 462 EEEEEEEEEEQPQ----PAQPPTLPVEEKKKIPDPDSDD 496
>RGD|1561046 [details] [associations]
symbol:Smarca1 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 1"
species:10116 "Rattus norvegicus" [GO:0000733 "DNA strand
renaturation" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006338
"chromatin remodeling" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=ISO] [GO:0007420 "brain development"
evidence=ISO] [GO:0016589 "NURF complex" evidence=ISO] [GO:0030182
"neuron differentiation" evidence=ISO] [GO:0031491 "nucleosome
binding" evidence=IEA] [GO:0036310 "annealing helicase activity"
evidence=ISO] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0090537 "CERF
complex" evidence=ISO] [GO:2000177 "regulation of neural precursor
cell proliferation" evidence=ISO] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISO] [GO:0070615 "nucleosome-dependent ATPase
activity" evidence=ISO] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 RGD:1561046 GO:GO:0005524 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 IPI:IPI00947680
PRIDE:D3ZIE5 Ensembl:ENSRNOT00000068478 UCSC:RGD:1561046
ArrayExpress:D3ZIE5 Uniprot:D3ZIE5
Length = 1034
Score = 229 (85.7 bits), Expect = 8.7e-18, P = 8.7e-18
Identities = 48/117 (41%), Positives = 69/117 (58%)
Query: 82 KPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTI 141
+ T+++ ++E P ++ G L YQ+ G+NWL + ++ ILADEMGLGKT+QTI
Sbjct: 142 RKTSNVCVRFEVSPSYVK--GGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTI 199
Query: 142 TFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIV-LRD 197
L L + GP +V P ST+ NW EF+ W P V+ +VGDKD R +RD
Sbjct: 200 ALLGYLKHYRNFPGPHMVLVPKSTLHNWMNEFKRWVPSLRVICFVGDKDVRAAFIRD 256
>ZFIN|ZDB-GENE-050522-499 [details] [associations]
symbol:smarcad1 "SWI/SNF-related, matrix-associated
actin-dependent regulator of chromatin, subfamily a, containing
DEAD/H box 1" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=ISS] [GO:0000729 "DNA double-strand break
processing" evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-050522-499 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0043044 SUPFAM:SSF46934 GO:GO:0000729 HOGENOM:HOG000172362
GO:GO:0035861 GeneTree:ENSGT00630000089890 OMA:KEERYMA
HOVERGEN:HBG055804 EMBL:AL807792 IPI:IPI00492619 UniGene:Dr.3950
ProteinModelPortal:B0R061 Ensembl:ENSDART00000091409
ArrayExpress:B0R061 Bgee:B0R061 Uniprot:B0R061
Length = 972
Score = 228 (85.3 bits), Expect = 1.0e-17, P = 1.0e-17
Identities = 51/108 (47%), Positives = 65/108 (60%)
Query: 93 KQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGH 152
KQP L+ + ++L AYQL G+ WL + ILADEMGLGKTIQ I FL L+++G
Sbjct: 437 KQPKVLN-SNLKLQAYQLIGLKWLILLHQHKLSGILADEMGLGKTIQAIAFLAHLYEKG- 494
Query: 153 CKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDI 200
KGP L++ P ST+ NW RE W P V+ Y G + R LR DI
Sbjct: 495 IKGPHLITVPSSTLDNWVRELGLWCPSLKVLIYYGSVEDRKYLRQ-DI 541
>UNIPROTKB|F1MJ46 [details] [associations]
symbol:SMARCA4 "Transcription activator BRG1" species:9913
"Bos taurus" [GO:0071565 "nBAF complex" evidence=IEA] [GO:0071564
"npBAF complex" evidence=IEA] [GO:0060347 "heart trabecula
formation" evidence=IEA] [GO:0060318 "definitive erythrocyte
differentiation" evidence=IEA] [GO:0048730 "epidermis
morphogenesis" evidence=IEA] [GO:0048562 "embryonic organ
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043966 "histone H3 acetylation" evidence=IEA] [GO:0043388
"positive regulation of DNA binding" evidence=IEA] [GO:0035887
"aortic smooth muscle cell differentiation" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0030902 "hindbrain development" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0030216 "keratinocyte
differentiation" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0010424 "DNA methylation on cytosine within a CG
sequence" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0007403 "glial cell fate determination"
evidence=IEA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA]
[GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001889 "liver development"
evidence=IEA] [GO:0001835 "blastocyst hatching" evidence=IEA]
[GO:0001832 "blastocyst growth" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0000792
"heterochromatin" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
GO:GO:0001889 GO:GO:0003682 GO:GO:0006338 GO:GO:0000122
GO:GO:0071564 GO:GO:0071565 GO:GO:0000902 GO:GO:0004386
GO:GO:0001570 GO:GO:0035116 GO:GO:0005719 GO:GO:0030902
GO:GO:0048730 GO:GO:0000977 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0019827 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347
GO:GO:0043966 GO:GO:0043388 GeneTree:ENSGT00550000074659
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 GO:GO:0001835
GO:GO:0007403 GO:GO:0006346 GO:GO:0010424 GO:GO:0060318
GO:GO:0048562 GO:GO:0001832 GO:GO:0005726 GO:GO:0035887
IPI:IPI00693529 OMA:HKPMESM EMBL:DAAA02019479 EMBL:DAAA02019480
EMBL:DAAA02019481 Ensembl:ENSBTAT00000025598 ArrayExpress:F1MJ46
Uniprot:F1MJ46
Length = 1604
Score = 221 (82.9 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 45/104 (43%), Positives = 63/104 (60%)
Query: 89 KKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLF 148
++ +KQ + + G+ L YQ++G+ WL + N++ ILADEMGLGKTIQTI + L
Sbjct: 732 ERVDKQSALMVN-GV-LKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLM 789
Query: 149 KEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCR 192
+ GPFL+ PLST+ NW EF+ WAP V+Y G R
Sbjct: 790 EHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAAR 833
Score = 37 (18.1 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 10/39 (25%), Positives = 19/39 (48%)
Query: 62 QEDEDGASGSKPRRYTPPPEKPTTDLRKKYEKQPPFLDD 100
+E+E+ +P+ P + PT + +K + P DD
Sbjct: 655 EEEEEEEEEEQPQ----PAQPPTLPVEEKKKIPDPDSDD 689
>UNIPROTKB|A7Z019 [details] [associations]
symbol:SMARCA4 "Transcription activator BRG1" species:9913
"Bos taurus" [GO:0071565 "nBAF complex" evidence=ISS] [GO:0071564
"npBAF complex" evidence=ISS] [GO:0060347 "heart trabecula
formation" evidence=IEA] [GO:0060318 "definitive erythrocyte
differentiation" evidence=IEA] [GO:0048730 "epidermis
morphogenesis" evidence=IEA] [GO:0048562 "embryonic organ
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043966 "histone H3 acetylation" evidence=IEA] [GO:0043388
"positive regulation of DNA binding" evidence=IEA] [GO:0035887
"aortic smooth muscle cell differentiation" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0030902 "hindbrain development" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0030216 "keratinocyte
differentiation" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0010424 "DNA methylation on cytosine within a CG
sequence" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0007403 "glial cell fate determination"
evidence=IEA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA]
[GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001889 "liver development"
evidence=IEA] [GO:0001835 "blastocyst hatching" evidence=IEA]
[GO:0001832 "blastocyst growth" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0000792
"heterochromatin" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
GO:GO:0001889 GO:GO:0006351 GO:GO:0003682 GO:GO:0006338
GO:GO:0000122 GO:GO:0071564 GO:GO:0071565 GO:GO:0000902
GO:GO:0004386 GO:GO:0001570 GO:GO:0035116 GO:GO:0005719
GO:GO:0030902 GO:GO:0048730 GO:GO:0000977 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0019827
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347 GO:GO:0043966
GO:GO:0043388 KO:K11647 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GO:GO:0001835 GO:GO:0007403 GO:GO:0006346 GO:GO:0010424
GO:GO:0060318 GO:GO:0048562 GO:GO:0001832 GO:GO:0005726
HOGENOM:HOG000172363 HOVERGEN:HBG056636 GO:GO:0035887
OrthoDB:EOG418BMJ EMBL:BC153216 IPI:IPI00693529
RefSeq:NP_001099084.1 UniGene:Bt.27590 ProteinModelPortal:A7Z019
SMR:A7Z019 STRING:A7Z019 PRIDE:A7Z019 GeneID:414274 KEGG:bta:414274
CTD:6597 InParanoid:A7Z019 NextBio:20818684 ArrayExpress:A7Z019
Uniprot:A7Z019
Length = 1606
Score = 221 (82.9 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 45/104 (43%), Positives = 63/104 (60%)
Query: 89 KKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLF 148
++ +KQ + + G+ L YQ++G+ WL + N++ ILADEMGLGKTIQTI + L
Sbjct: 732 ERVDKQSALMVN-GV-LKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLM 789
Query: 149 KEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCR 192
+ GPFL+ PLST+ NW EF+ WAP V+Y G R
Sbjct: 790 EHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAAR 833
Score = 37 (18.1 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 10/39 (25%), Positives = 19/39 (48%)
Query: 62 QEDEDGASGSKPRRYTPPPEKPTTDLRKKYEKQPPFLDD 100
+E+E+ +P+ P + PT + +K + P DD
Sbjct: 655 EEEEEEEEEEQPQ----PAQPPTLPVEEKKKIPDPDSDD 689
>UNIPROTKB|F1MFS2 [details] [associations]
symbol:CHD1L "Chromodomain-helicase-DNA-binding protein
1-like" species:9913 "Bos taurus" [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003677 GO:GO:0006974
GO:GO:0006338 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR002589 PROSITE:PS51154 GO:GO:0008026 IPI:IPI00710168
OMA:TCQTIAL GeneTree:ENSGT00670000098110 EMBL:DAAA02007335
Ensembl:ENSBTAT00000027762 Uniprot:F1MFS2
Length = 896
Score = 226 (84.6 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 48/103 (46%), Positives = 60/103 (58%)
Query: 101 TGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVS 160
TG+ L YQL+G+NWL + IL DEMGLGKT QTI L + +GPFL+
Sbjct: 44 TGIHLRPYQLQGVNWLAQCFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLNDEGPFLIL 103
Query: 161 APLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWE 203
PLS + NW+ E E +AP VTY GDKD R L+ D+ E
Sbjct: 104 CPLSVLSNWKEEMERFAPGLSCVTYAGDKDKRACLQQ-DLKQE 145
>UNIPROTKB|Q3B7N1 [details] [associations]
symbol:CHD1L "Chromodomain-helicase-DNA-binding protein
1-like" species:9913 "Bos taurus" [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0000166 "nucleotide binding"
evidence=ISS] [GO:0006281 "DNA repair" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0000166
GO:GO:0003677 GO:GO:0006281 GO:GO:0006974 GO:GO:0016887
GO:GO:0006338 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589 PROSITE:PS51154
GO:GO:0008026 EMBL:BC107534 IPI:IPI00710168 RefSeq:NP_001032909.1
UniGene:Bt.18335 ProteinModelPortal:Q3B7N1 PRIDE:Q3B7N1
GeneID:524787 KEGG:bta:524787 CTD:9557 HOGENOM:HOG000030789
HOVERGEN:HBG077542 InParanoid:Q3B7N1 OrthoDB:EOG4SXNBV
NextBio:20874039 Uniprot:Q3B7N1
Length = 897
Score = 226 (84.6 bits), Expect = 1.5e-17, P = 1.5e-17
Identities = 48/103 (46%), Positives = 60/103 (58%)
Query: 101 TGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVS 160
TG+ L YQL+G+NWL + IL DEMGLGKT QTI L + +GPFL+
Sbjct: 44 TGIHLRPYQLQGVNWLAQCFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLNDEGPFLIL 103
Query: 161 APLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWE 203
PLS + NW+ E E +AP VTY GDKD R L+ D+ E
Sbjct: 104 CPLSVLSNWKEEMERFAPGLSCVTYAGDKDKRACLQQ-DLKQE 145
>MGI|MGI:88192 [details] [associations]
symbol:Smarca4 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 4"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP;IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=ISO] [GO:0000792 "heterochromatin"
evidence=IDA] [GO:0000902 "cell morphogenesis" evidence=IMP]
[GO:0000977 "RNA polymerase II regulatory region sequence-specific
DNA binding" evidence=IDA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=ISO] [GO:0001570
"vasculogenesis" evidence=IMP] [GO:0001701 "in utero embryonic
development" evidence=IMP] [GO:0001832 "blastocyst growth"
evidence=IMP] [GO:0001835 "blastocyst hatching" evidence=IMP]
[GO:0001889 "liver development" evidence=IMP] [GO:0002039 "p53
binding" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0003713 "transcription
coactivator activity" evidence=ISO] [GO:0003714 "transcription
corepressor activity" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005719 "nuclear euchromatin" evidence=IDA]
[GO:0005726 "perichromatin fibrils" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
[GO:0006337 "nucleosome disassembly" evidence=ISO] [GO:0006338
"chromatin remodeling" evidence=ISO;IMP] [GO:0006346
"methylation-dependent chromatin silencing" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IMP] [GO:0007403 "glial cell fate determination"
evidence=IMP] [GO:0007507 "heart development" evidence=IMP]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISO]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0010424 "DNA methylation on cytosine within a CG sequence"
evidence=IMP] [GO:0016514 "SWI/SNF complex" evidence=ISO;IDA;TAS]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016817 "hydrolase activity,
acting on acid anhydrides" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IMP;TAS] [GO:0019827 "stem cell maintenance" evidence=IMP]
[GO:0022008 "neurogenesis" evidence=IDA] [GO:0030198 "extracellular
matrix organization" evidence=IMP] [GO:0030216 "keratinocyte
differentiation" evidence=IMP] [GO:0030308 "negative regulation of
cell growth" evidence=ISO] [GO:0030900 "forebrain development"
evidence=IMP] [GO:0030902 "hindbrain development" evidence=IMP]
[GO:0030957 "Tat protein binding" evidence=ISO] [GO:0032403
"protein complex binding" evidence=ISO] [GO:0035116 "embryonic
hindlimb morphogenesis" evidence=IMP] [GO:0035887 "aortic smooth
muscle cell differentiation" evidence=IMP] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISO] [GO:0043388
"positive regulation of DNA binding" evidence=IGI] [GO:0043923
"positive regulation by host of viral transcription" evidence=ISO]
[GO:0043966 "histone H3 acetylation" evidence=IMP] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IGI;ISO;IMP] [GO:0047485
"protein N-terminus binding" evidence=ISO] [GO:0048562 "embryonic
organ morphogenesis" evidence=IMP] [GO:0048730 "epidermis
morphogenesis" evidence=IMP] [GO:0050681 "androgen receptor
binding" evidence=ISO] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0060318 "definitive erythrocyte differentiation"
evidence=IMP] [GO:0060347 "heart trabecula formation" evidence=IGI]
[GO:0060766 "negative regulation of androgen receptor signaling
pathway" evidence=ISO] [GO:0070577 "histone acetyl-lysine binding"
evidence=ISO] [GO:0071564 "npBAF complex" evidence=ISO;IDA]
[GO:0071565 "nBAF complex" evidence=IDA] [GO:0071778 "WINAC
complex" evidence=ISO] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 MGI:MGI:88192
GO:GO:0005524 GO:GO:0003714 GO:GO:0030216 GO:GO:0045944
GO:GO:0030198 GO:GO:0030900 GO:GO:0001889 EMBL:CH466522
GO:GO:0006351 GO:GO:0003682 GO:GO:0016887 GO:GO:0006338
GO:GO:0000122 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
GO:GO:0000902 GO:GO:0004386 GO:GO:0001570 GO:GO:0035116
GO:GO:0005719 GO:GO:0030902 GO:GO:0048730 GO:GO:0000977
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0019827 GO:GO:0006334 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347
GO:GO:0043966 GO:GO:0043388 KO:K11647 GeneTree:ENSGT00550000074659
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 GO:GO:0001835
GO:GO:0007403 GO:GO:0006346 GO:GO:0010424 GO:GO:0060318
GO:GO:0048562 GO:GO:0001832 GO:GO:0005726 HOGENOM:HOG000172363
HOVERGEN:HBG056636 GO:GO:0035887 OrthoDB:EOG418BMJ CTD:6597
EMBL:AK147285 EMBL:AK160825 EMBL:AK166837 EMBL:BC079560
IPI:IPI00875789 IPI:IPI00955124 RefSeq:NP_001167549.1
RefSeq:NP_001167550.1 RefSeq:NP_035547.2 UniGene:Mm.286593
ProteinModelPortal:Q3TKT4 SMR:Q3TKT4 DIP:DIP-40650N DIP:DIP-59249N
IntAct:Q3TKT4 MINT:MINT-1958721 STRING:Q3TKT4 PhosphoSite:Q3TKT4
PaxDb:Q3TKT4 PRIDE:Q3TKT4 Ensembl:ENSMUST00000034707
Ensembl:ENSMUST00000098948 Ensembl:ENSMUST00000174008 GeneID:20586
KEGG:mmu:20586 UCSC:uc009omd.2 UCSC:uc009ome.2 InParanoid:Q3TUD7
NextBio:298883 Bgee:Q3TKT4 Genevestigator:Q3TKT4 Uniprot:Q3TKT4
Length = 1613
Score = 221 (82.9 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 45/104 (43%), Positives = 63/104 (60%)
Query: 89 KKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLF 148
++ +KQ + + G+ L YQ++G+ WL + N++ ILADEMGLGKTIQTI + L
Sbjct: 740 ERVDKQSALMVN-GV-LKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLM 797
Query: 149 KEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCR 192
+ GPFL+ PLST+ NW EF+ WAP V+Y G R
Sbjct: 798 EHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAAR 841
Score = 37 (18.1 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 10/39 (25%), Positives = 19/39 (48%)
Query: 62 QEDEDGASGSKPRRYTPPPEKPTTDLRKKYEKQPPFLDD 100
+E+E+ +P+ P + PT + +K + P DD
Sbjct: 663 EEEEEEEEEEQPQ----PAQPPTLPVEEKKKIPDPDSDD 697
>RGD|621728 [details] [associations]
symbol:Smarca4 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 4"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0000792
"heterochromatin" evidence=ISO] [GO:0000902 "cell morphogenesis"
evidence=ISO] [GO:0000977 "RNA polymerase II regulatory region
sequence-specific DNA binding" evidence=ISO] [GO:0001105 "RNA
polymerase II transcription coactivator activity" evidence=ISO]
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0001701 "in utero
embryonic development" evidence=ISO] [GO:0001832 "blastocyst
growth" evidence=ISO] [GO:0001835 "blastocyst hatching"
evidence=ISO] [GO:0001889 "liver development" evidence=ISO]
[GO:0002039 "p53 binding" evidence=ISO] [GO:0003407 "neural retina
development" evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISO] [GO:0003713
"transcription coactivator activity" evidence=ISO] [GO:0003714
"transcription corepressor activity" evidence=ISO;ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005719 "nuclear euchromatin"
evidence=ISO] [GO:0005726 "perichromatin fibrils" evidence=ISO]
[GO:0006337 "nucleosome disassembly" evidence=ISO;IDA] [GO:0006338
"chromatin remodeling" evidence=ISO] [GO:0006346
"methylation-dependent chromatin silencing" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA;ISO] [GO:0007403 "glial cell fate determination"
evidence=ISO] [GO:0007507 "heart development" evidence=ISO]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISO]
[GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0010424 "DNA methylation on cytosine within a CG sequence"
evidence=ISO] [GO:0016514 "SWI/SNF complex" evidence=ISO;IDA]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0019827 "stem cell
maintenance" evidence=ISO] [GO:0022008 "neurogenesis" evidence=ISO]
[GO:0030198 "extracellular matrix organization" evidence=ISO]
[GO:0030216 "keratinocyte differentiation" evidence=ISO]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0030900 "forebrain development" evidence=ISO] [GO:0030902
"hindbrain development" evidence=ISO] [GO:0030957 "Tat protein
binding" evidence=ISO] [GO:0032403 "protein complex binding"
evidence=IDA] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=ISO] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=ISO] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IDA] [GO:0043388 "positive regulation of DNA
binding" evidence=ISO] [GO:0043923 "positive regulation by host of
viral transcription" evidence=ISO] [GO:0043966 "histone H3
acetylation" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0047485 "protein
N-terminus binding" evidence=ISO] [GO:0048562 "embryonic organ
morphogenesis" evidence=ISO] [GO:0048730 "epidermis morphogenesis"
evidence=ISO] [GO:0050681 "androgen receptor binding" evidence=ISO]
[GO:0051091 "positive regulation of sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0060318
"definitive erythrocyte differentiation" evidence=ISO] [GO:0060347
"heart trabecula formation" evidence=ISO] [GO:0060766 "negative
regulation of androgen receptor signaling pathway" evidence=ISO]
[GO:0070577 "histone acetyl-lysine binding" evidence=ISO]
[GO:0071564 "npBAF complex" evidence=ISO;ISS] [GO:0071565 "nBAF
complex" evidence=ISO;ISS] [GO:0071778 "WINAC complex"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 RGD:621728 GO:GO:0005524 GO:GO:0003714
GO:GO:0007399 GO:GO:0006355 GO:GO:0032403 GO:GO:0003677
GO:GO:0006351 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
GO:GO:0004386 GO:GO:0006337 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043044 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 HOGENOM:HOG000172363
HOVERGEN:HBG056636 EMBL:AJ504723 IPI:IPI00781891 UniGene:Rn.23417
ProteinModelPortal:Q8K1P7 SMR:Q8K1P7 IntAct:Q8K1P7 STRING:Q8K1P7
PhosphoSite:Q8K1P7 PRIDE:Q8K1P7 UCSC:RGD:621728 ArrayExpress:Q8K1P7
Genevestigator:Q8K1P7 Uniprot:Q8K1P7
Length = 1613
Score = 221 (82.9 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 45/104 (43%), Positives = 63/104 (60%)
Query: 89 KKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLF 148
++ +KQ + + G+ L YQ++G+ WL + N++ ILADEMGLGKTIQTI + L
Sbjct: 740 ERVDKQSALMVN-GV-LKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLM 797
Query: 149 KEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCR 192
+ GPFL+ PLST+ NW EF+ WAP V+Y G R
Sbjct: 798 EHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAAR 841
Score = 37 (18.1 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 10/39 (25%), Positives = 19/39 (48%)
Query: 62 QEDEDGASGSKPRRYTPPPEKPTTDLRKKYEKQPPFLDD 100
+E+E+ +P+ P + PT + +K + P DD
Sbjct: 663 EEEEEEEEEEQPQ----PAQPPTLPVEEKKKIPDPDSDD 697
>UNIPROTKB|G3V790 [details] [associations]
symbol:Smarca4 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 4, isoform
CRA_b" species:10116 "Rattus norvegicus" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0000977 "RNA
polymerase II regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0001832 "blastocyst growth" evidence=IEA] [GO:0001835
"blastocyst hatching" evidence=IEA] [GO:0001889 "liver development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005719 "nuclear euchromatin"
evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0006346
"methylation-dependent chromatin silencing" evidence=IEA]
[GO:0007403 "glial cell fate determination" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0010424 "DNA methylation on cytosine within a CG sequence"
evidence=IEA] [GO:0019827 "stem cell maintenance" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0030216 "keratinocyte differentiation" evidence=IEA]
[GO:0030900 "forebrain development" evidence=IEA] [GO:0030902
"hindbrain development" evidence=IEA] [GO:0035116 "embryonic
hindlimb morphogenesis" evidence=IEA] [GO:0035887 "aortic smooth
muscle cell differentiation" evidence=IEA] [GO:0043388 "positive
regulation of DNA binding" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0048562 "embryonic organ morphogenesis" evidence=IEA]
[GO:0048730 "epidermis morphogenesis" evidence=IEA] [GO:0060318
"definitive erythrocyte differentiation" evidence=IEA] [GO:0060347
"heart trabecula formation" evidence=IEA] [GO:0071564 "npBAF
complex" evidence=IEA] [GO:0071565 "nBAF complex" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 RGD:621728 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GeneTree:ENSGT00550000074659
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 EMBL:CH473993
UniGene:Rn.23417 Ensembl:ENSRNOT00000013165 Uniprot:G3V790
Length = 1614
Score = 221 (82.9 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 45/104 (43%), Positives = 63/104 (60%)
Query: 89 KKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLF 148
++ +KQ + + G+ L YQ++G+ WL + N++ ILADEMGLGKTIQTI + L
Sbjct: 740 ERVDKQSALMVN-GV-LKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLM 797
Query: 149 KEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCR 192
+ GPFL+ PLST+ NW EF+ WAP V+Y G R
Sbjct: 798 EHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAAR 841
Score = 37 (18.1 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 10/39 (25%), Positives = 19/39 (48%)
Query: 62 QEDEDGASGSKPRRYTPPPEKPTTDLRKKYEKQPPFLDD 100
+E+E+ +P+ P + PT + +K + P DD
Sbjct: 663 EEEEEEEEEEQPQ----PAQPPTLPVEEKKKIPDPDSDD 697
>UNIPROTKB|F1M6Y4 [details] [associations]
symbol:Smarca4 "Transcription activator BRG1" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000792 "heterochromatin" evidence=IEA] [GO:0000902 "cell
morphogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0001832 "blastocyst
growth" evidence=IEA] [GO:0001835 "blastocyst hatching"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0005726
"perichromatin fibrils" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IEA] [GO:0006346 "methylation-dependent
chromatin silencing" evidence=IEA] [GO:0007403 "glial cell fate
determination" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0010424 "DNA methylation on cytosine
within a CG sequence" evidence=IEA] [GO:0019827 "stem cell
maintenance" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0030216 "keratinocyte
differentiation" evidence=IEA] [GO:0030900 "forebrain development"
evidence=IEA] [GO:0030902 "hindbrain development" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0035887 "aortic smooth muscle cell differentiation"
evidence=IEA] [GO:0043388 "positive regulation of DNA binding"
evidence=IEA] [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0048562 "embryonic organ
morphogenesis" evidence=IEA] [GO:0048730 "epidermis morphogenesis"
evidence=IEA] [GO:0060318 "definitive erythrocyte differentiation"
evidence=IEA] [GO:0060347 "heart trabecula formation" evidence=IEA]
[GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 RGD:621728 GO:GO:0005524
GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
GO:GO:0001889 GO:GO:0003682 GO:GO:0006338 GO:GO:0000122
GO:GO:0071564 GO:GO:0071565 GO:GO:0000902 GO:GO:0004386
GO:GO:0001570 GO:GO:0035116 GO:GO:0005719 GO:GO:0030902
GO:GO:0048730 GO:GO:0000977 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0019827 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347
GO:GO:0043966 GO:GO:0043388 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GO:GO:0001835 GO:GO:0007403 GO:GO:0006346 GO:GO:0010424
GO:GO:0060318 GO:GO:0048562 GO:GO:0001832 GO:GO:0005726
GO:GO:0035887 IPI:IPI00951882 Ensembl:ENSRNOT00000060927
ArrayExpress:F1M6Y4 Uniprot:F1M6Y4
Length = 1618
Score = 221 (82.9 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 45/104 (43%), Positives = 63/104 (60%)
Query: 89 KKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLF 148
++ +KQ + + G+ L YQ++G+ WL + N++ ILADEMGLGKTIQTI + L
Sbjct: 740 ERVDKQSALMVN-GV-LKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLM 797
Query: 149 KEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCR 192
+ GPFL+ PLST+ NW EF+ WAP V+Y G R
Sbjct: 798 EHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAAR 841
Score = 37 (18.1 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 10/39 (25%), Positives = 19/39 (48%)
Query: 62 QEDEDGASGSKPRRYTPPPEKPTTDLRKKYEKQPPFLDD 100
+E+E+ +P+ P + PT + +K + P DD
Sbjct: 663 EEEEEEEEEEQPQ----PAQPPTLPVEEKKKIPDPDSDD 697
>FB|FBgn0000212 [details] [associations]
symbol:brm "brahma" species:7227 "Drosophila melanogaster"
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=ISS;IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS;IDA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=NAS]
[GO:0003713 "transcription coactivator activity" evidence=ISS;NAS]
[GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0048096
"chromatin-mediated maintenance of transcription" evidence=NAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0035060 "brahma
complex" evidence=IDA;TAS] [GO:0048477 "oogenesis" evidence=TAS]
[GO:0045749 "negative regulation of S phase of mitotic cell cycle"
evidence=IGI] [GO:0035172 "hemocyte proliferation" evidence=TAS]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0007474 "imaginal disc-derived wing vein specification"
evidence=IMP] [GO:0048666 "neuron development" evidence=IMP]
[GO:0007517 "muscle organ development" evidence=IMP] [GO:0048813
"dendrite morphogenesis" evidence=IMP] [GO:0006911 "phagocytosis,
engulfment" evidence=IMP] [GO:0007409 "axonogenesis" evidence=IMP]
[GO:0007480 "imaginal disc-derived leg morphogenesis" evidence=IGI]
[GO:0008586 "imaginal disc-derived wing vein morphogenesis"
evidence=IMP] [GO:0008587 "imaginal disc-derived wing margin
morphogenesis" evidence=IMP] [GO:0045742 "positive regulation of
epidermal growth factor receptor signaling pathway" evidence=IMP]
[GO:0070983 "dendrite guidance" evidence=IMP] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0043974 "histone H3-K27
acetylation" evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0045893 GO:GO:0006911 EMBL:AE014296 GO:GO:0003677
GO:GO:0008586 GO:GO:0007474 GO:GO:0048477 GO:GO:0006351
GO:GO:0016887 GO:GO:0007517 GO:GO:0007409 GO:GO:0004386
GO:GO:0045742 GO:GO:0007480 GO:GO:0045749 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043044
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0008587 KO:K11647 EMBL:M85049
EMBL:AY095048 EMBL:BT009972 PIR:A42091 RefSeq:NP_536745.4
RefSeq:NP_536746.1 RefSeq:NP_730088.1 RefSeq:NP_730089.1
UniGene:Dm.5356 ProteinModelPortal:P25439 SMR:P25439 DIP:DIP-36728N
IntAct:P25439 MINT:MINT-6541230 STRING:P25439 PaxDb:P25439
EnsemblMetazoa:FBtr0075525 EnsemblMetazoa:FBtr0075526 GeneID:39744
KEGG:dme:Dmel_CG5942 CTD:39744 FlyBase:FBgn0000212
GeneTree:ENSGT00550000074659 InParanoid:P25439 OMA:QKKYTIS
OrthoDB:EOG4K3JB3 PhylomeDB:P25439 ChiTaRS:SMARCA2 GenomeRNAi:39744
NextBio:815155 Bgee:P25439 GermOnline:CG5942 GO:GO:0035060
GO:GO:0070983 GO:GO:0035172 GO:GO:0043974 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 Uniprot:P25439
Length = 1638
Score = 219 (82.2 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 44/93 (47%), Positives = 59/93 (63%)
Query: 105 LHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLS 164
L YQ++G+ WL + N++ ILADEMGLGKTIQTI+ + L GP+L+ PLS
Sbjct: 773 LKEYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTISLVTYLMDRKKVMGPYLIIVPLS 832
Query: 165 TIINWEREFETWAPDFYVVTYVGDKDCRIVLRD 197
T+ NW EFE WAP VV+Y G R +L++
Sbjct: 833 TLPNWVLEFEKWAPAVGVVSYKGSPQGRRLLQN 865
Score = 39 (18.8 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 7/22 (31%), Positives = 12/22 (54%)
Query: 62 QEDEDGASGSKPRRYTPPPEKP 83
Q+ ++G+ P+ TPP P
Sbjct: 245 QQQPPPSAGTPPQCSTPPASNP 266
Score = 36 (17.7 bits), Expect = 3.2e-17, Sum P(2) = 3.2e-17
Identities = 7/24 (29%), Positives = 8/24 (33%)
Query: 73 PRRYTPPPEKPTTDLRKKYEKQPP 96
P PP + P Y Q P
Sbjct: 17 PSPMAPPSQSPAPSPHSPYPHQQP 40
Score = 36 (17.7 bits), Expect = 3.2e-17, Sum P(2) = 3.2e-17
Identities = 6/27 (22%), Positives = 15/27 (55%)
Query: 78 PPPEKPTTDLRKKYEKQPPFLDDTGMQ 104
PPPE+ + + ++ +++ G+Q
Sbjct: 128 PPPERSSQENLHALQRAIDSMEEKGLQ 154
>ZFIN|ZDB-GENE-030605-1 [details] [associations]
symbol:smarca4 "SWI/SNF related, matrix associated,
actin dependent regulator of chromatin, subfamily a, member 4"
species:7955 "Danio rerio" [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0031101 "fin regeneration" evidence=IMP] [GO:0003407 "neural
retina development" evidence=IMP] [GO:0007417 "central nervous
system development" evidence=IMP] [GO:0014032 "neural crest cell
development" evidence=IMP] [GO:0060059 "embryonic retina
morphogenesis in camera-type eye" evidence=IMP] [GO:0010842 "retina
layer formation" evidence=IMP] [GO:0021634 "optic nerve formation"
evidence=IMP] [GO:0030182 "neuron differentiation" evidence=IMP]
[GO:0060973 "cell migration involved in heart development"
evidence=IMP] [GO:0001947 "heart looping" evidence=IMP] [GO:0060038
"cardiac muscle cell proliferation" evidence=IMP] [GO:0048596
"embryonic camera-type eye morphogenesis" evidence=IMP] [GO:0000185
"activation of MAPKKK activity" evidence=IMP] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 ZFIN:ZDB-GENE-030605-1 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0030182 GO:GO:0003677 GO:GO:0007417
GO:GO:0004386 GO:GO:0001947 GO:GO:0010842 GO:GO:0014032
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0031101 GO:GO:0060038 GO:GO:0048596
KO:K11647 GeneTree:ENSGT00550000074659 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 GO:GO:0060059 GO:GO:0000185 HOGENOM:HOG000172363
HOVERGEN:HBG056636 CTD:6597 OMA:HKPMESM EMBL:BX322663 EMBL:BC163918
EMBL:BC163920 EMBL:AY205256 EMBL:AY218841 IPI:IPI00493397
RefSeq:NP_853634.1 UniGene:Dr.2414 SMR:Q7ZSY3 STRING:Q7ZSY3
Ensembl:ENSDART00000115110 Ensembl:ENSDART00000134514 GeneID:353295
KEGG:dre:353295 InParanoid:Q7ZSY3 NextBio:20812727 GO:GO:0060973
GO:GO:0021634 Uniprot:Q7ZSY3
Length = 1627
Score = 229 (85.7 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 49/104 (47%), Positives = 63/104 (60%)
Query: 89 KKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLF 148
+K EKQ L + G QL YQ++G+ WL + N++ ILADEMGLGKTIQTI + L
Sbjct: 752 EKVEKQSSLLVN-G-QLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLM 809
Query: 149 KEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCR 192
+ GPFL+ PLST+ NW EF+ WAP V+Y G R
Sbjct: 810 EFKRLNGPFLIIVPLSTLSNWVYEFDKWAPSVVKVSYKGSPAAR 853
>DICTYBASE|DDB_G0267556 [details] [associations]
symbol:DDB_G0267556 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0267556
GO:GO:0005524 GO:GO:0003677 EMBL:AAFI02000003 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
RefSeq:XP_647125.1 ProteinModelPortal:Q55GQ9
EnsemblProtists:DDB0233433 GeneID:8615929 KEGG:ddi:DDB_G0267556
InParanoid:Q55GQ9 OMA:CANVVIF ProtClustDB:CLSZ2501118
Uniprot:Q55GQ9
Length = 1159
Score = 215 (80.7 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 45/107 (42%), Positives = 63/107 (58%)
Query: 90 KYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFK 149
K QP ++ + YQL G+NW+ + + I+ ILADEMGLGKT+QTI+ L + +
Sbjct: 530 KLVAQPKIINKV---MRNYQLIGLNWMAVLYKEKINGILADEMGLGKTVQTISLLAHIKE 586
Query: 150 EGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLR 196
+ GP LV P + + NWEREF+TW P +V Y G+ R LR
Sbjct: 587 AYNDNGPHLVVVPATILANWEREFQTWCPSLSIVRYYGNLREREELR 633
Score = 39 (18.8 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 9/15 (60%), Positives = 10/15 (66%)
Query: 71 SKPRRYTPPPEKPTT 85
SKP + PP KPTT
Sbjct: 256 SKPTQQ--PPTKPTT 268
>DICTYBASE|DDB_G0271052 [details] [associations]
symbol:snf2b "SNF2-related protein Snf2a"
species:44689 "Dictyostelium discoideum" [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00951 dictyBase:DDB_G0271052 GO:GO:0005524 GO:GO:0005654
EMBL:AAFI02000005 GO:GO:0003677 GO:GO:0006357 GO:GO:0004386
InterPro:IPR011050 SUPFAM:SSF51126 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF47370
KO:K11647 InterPro:IPR014012 PROSITE:PS51204 RefSeq:XP_646649.1
ProteinModelPortal:Q55C32 EnsemblProtists:DDB0220695 GeneID:8617621
KEGG:ddi:DDB_G0271052 InParanoid:Q55C32 OMA:NINDNPN Uniprot:Q55C32
Length = 3247
Score = 228 (85.3 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 47/100 (47%), Positives = 61/100 (61%)
Query: 93 KQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGH 152
+QP L+ G +L YQ++G+ W+ + ++ ILADEMGLGKTIQTI + L +
Sbjct: 1701 EQPALLE--GGKLKPYQMQGLQWMVSLYNNKLNGILADEMGLGKTIQTIALVSYLIEVKK 1758
Query: 153 CKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCR 192
GPFLV PLST+ NW +EF WAP V Y GDK R
Sbjct: 1759 NNGPFLVVVPLSTLSNWGQEFSKWAPKVKRVLYYGDKPAR 1798
Score = 36 (17.7 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 6/8 (75%), Positives = 6/8 (75%)
Query: 78 PPPEKPTT 85
PPP PTT
Sbjct: 1654 PPPPPPTT 1661
Score = 34 (17.0 bits), Expect = 2.7e-17, Sum P(2) = 2.7e-17
Identities = 7/37 (18%), Positives = 17/37 (45%)
Query: 60 ELQEDEDGASGSKPRRYTPPPEKPTTDLRKKYEKQPP 96
E Q+ + A +P++ P + + + ++Q P
Sbjct: 985 EQQQQQTQAQQPQPQQIQQPQHQQSQQQSENLQQQQP 1021
>UNIPROTKB|F1P0A4 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] InterPro:IPR000330
InterPro:IPR020838 Pfam:PF00176 Pfam:PF13892 GO:GO:0005524
GO:GO:0003677 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0016817 GeneTree:ENSGT00680000100002 EMBL:AADN02016239
EMBL:AADN02016240 IPI:IPI00819661 Ensembl:ENSGALT00000038610
ArrayExpress:F1P0A4 Uniprot:F1P0A4
Length = 469
Score = 220 (82.5 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 48/115 (41%), Positives = 69/115 (60%)
Query: 84 TTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITF 143
TT++ ++E+ P ++ G +L YQ+ G+NWL + I+ ILADEMGLGKT+QTI+
Sbjct: 146 TTNVCTRFEESPSYVK-WG-KLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISL 203
Query: 144 LYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIV-LRD 197
L + + GP +V P ST+ NW EF+ W P V +GDKD R +RD
Sbjct: 204 LGYMKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPTLRAVCLIGDKDQRAAFVRD 258
>SGD|S000001934 [details] [associations]
symbol:IRC5 "Putative ATPase containing the DEAD/H
helicase-related sequence motif" species:4932 "Saccharomyces
cerevisiae" [GO:0006312 "mitotic recombination" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 SGD:S000001934 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 EMBL:D50617 EMBL:BK006940 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006312 GeneTree:ENSGT00550000075106 PIR:S56293
RefSeq:NP_116696.2 ProteinModelPortal:P43610 SMR:P43610
DIP:DIP-5300N MINT:MINT-543614 STRING:P43610 PaxDb:P43610
PRIDE:P43610 EnsemblFungi:YFR038W GeneID:850599 KEGG:sce:YFR038W
CYGD:YFR038w OMA:FEIFNKW OrthoDB:EOG40S3Q6 NextBio:966463
Genevestigator:P43610 GermOnline:YFR038W Uniprot:P43610
Length = 853
Score = 224 (83.9 bits), Expect = 2.2e-17, P = 2.2e-17
Identities = 49/95 (51%), Positives = 62/95 (65%)
Query: 93 KQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGH 152
KQP L + L YQLEG+NWL + ++ ILADEMGLGKT+Q+I L ++ E
Sbjct: 212 KQPRLLKNC--ILKPYQLEGLNWLITLYENGLNGILADEMGLGKTVQSIALLAFIY-EMD 268
Query: 153 CKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVG 187
KGPFLV+APLST+ NW EF +APD V+ Y G
Sbjct: 269 TKGPFLVTAPLSTLDNWMNEFAKFAPDLPVLKYYG 303
>CGD|CAL0003962 [details] [associations]
symbol:orf19.239 species:5476 "Candida albicans" [GO:0016586
"RSC complex" evidence=IEA] [GO:0007059 "chromosome segregation"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0031055 "chromatin remodeling at
centromere" evidence=IEA] [GO:0006337 "nucleosome disassembly"
evidence=IEA] [GO:0016584 "nucleosome positioning" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0006368
"transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0007126 "meiosis" evidence=IEA] [GO:0007010
"cytoskeleton organization" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0000086
"G2/M transition of mitotic cell cycle" evidence=IEA] [GO:0015616
"DNA translocase activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0070577 "histone acetyl-lysine binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 CGD:CAL0003962 GO:GO:0005524 GO:GO:0003677
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
EMBL:AACQ01000027 EMBL:AACQ01000026 InterPro:IPR014012
PROSITE:PS51204 KO:K11786 RefSeq:XP_719938.1 RefSeq:XP_720068.1
ProteinModelPortal:Q5AEM9 STRING:Q5AEM9 GeneID:3638290
GeneID:3638351 KEGG:cal:CaO19.239 KEGG:cal:CaO19.7869
Uniprot:Q5AEM9
Length = 1303
Score = 226 (84.6 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 48/116 (41%), Positives = 72/116 (62%)
Query: 87 LRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYS 146
+++K +QP L G +L YQ++G+ W+ + +++ ILADEMGLGKTIQ+I+ +
Sbjct: 485 IKEKITEQPTIL--VGGKLKEYQMKGLEWMVSLYNNHLNGILADEMGLGKTIQSISLVTY 542
Query: 147 LFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISW 202
L ++ H + FL+ PLSTI NW EFE WAP V+ Y G + R L+ DI +
Sbjct: 543 LIEKKH-ENKFLIIVPLSTITNWTLEFEKWAPSIKVIVYKGSQQQRRSLQP-DIRY 596
>UNIPROTKB|E1BCV0 [details] [associations]
symbol:HELLS "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046651 "lymphocyte proliferation" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0031508 "centromeric heterochromatin assembly"
evidence=IEA] [GO:0010216 "maintenance of DNA methylation"
evidence=IEA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001655 "urogenital system
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
GO:GO:0001655 GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216
OMA:ETFYTAI GO:GO:0006346 GO:GO:0046651
GeneTree:ENSGT00550000075106 EMBL:DAAA02058849 EMBL:DAAA02058850
EMBL:DAAA02058851 IPI:IPI00710948 Ensembl:ENSBTAT00000007848
Uniprot:E1BCV0
Length = 816
Score = 223 (83.6 bits), Expect = 2.7e-17, P = 2.7e-17
Identities = 57/145 (39%), Positives = 78/145 (53%)
Query: 60 ELQEDEDGASGSKPR--RYTPPPEKPTTDLRKKYEKQP-PFLDD---TGMQLHAYQLEGI 113
+LQ+++D S K R + K D +K QP PF TG + YQ+EG+
Sbjct: 150 DLQKNKDSNSKIKDRLSQTVRQNTKFFFDPVRKCNGQPVPFQQPKHFTGGVMRWYQVEGM 209
Query: 114 NWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREF 173
WLR W I+ ILADEMGLGKT+Q I + + + G GPFLV PLST+ NW EF
Sbjct: 210 EWLRMLWENGINGILADEMGLGKTVQCIATIALMIQRG-VPGPFLVCGPLSTLPNWMAEF 268
Query: 174 ETWAPDFYVVTYVGDKDCRIVLRDH 198
+ + P+ + Y G + R +L H
Sbjct: 269 KRFTPEIPTMLYHGTQQERRILVKH 293
>CGD|CAL0000831 [details] [associations]
symbol:orf19.1734 species:5476 "Candida albicans" [GO:0031011
"Ino80 complex" evidence=IEA] [GO:0042766 "nucleosome mobilization"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0043486
"histone exchange" evidence=IEA] [GO:0006348 "chromatin silencing
at telomere" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043618 "regulation of transcription from RNA polymerase II
promoter in response to stress" evidence=IEA] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF13892 PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
CGD:CAL0000831 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006281 GO:GO:0006351 GO:GO:0016568
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACQ01000298 EMBL:AACQ01000297
RefSeq:XP_710247.1 RefSeq:XP_710254.1 STRING:Q59KI4 GeneID:3648140
GeneID:3648148 KEGG:cal:CaO19.1734 KEGG:cal:CaO19.9302 KO:K11665
Uniprot:Q59KI4
Length = 1387
Score = 216 (81.1 bits), Expect = 2.7e-17, Sum P(2) = 2.7e-17
Identities = 48/103 (46%), Positives = 65/103 (63%)
Query: 94 QPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHC 153
QP L T L YQL+G+NWL + Q I+ ILADEMGLGKT+Q+I+ L L + +
Sbjct: 664 QPNMLKCT---LKEYQLKGLNWLANLYEQGINGILADEMGLGKTVQSISVLAYLAETYNM 720
Query: 154 KGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLR 196
GPFLV P ST+ NW++E + P+F V+ Y G+ R +LR
Sbjct: 721 WGPFLVVTPASTLHNWQQEITKFVPEFKVLPYWGNAKDRKILR 763
Score = 38 (18.4 bits), Expect = 2.7e-17, Sum P(2) = 2.7e-17
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 81 EKPTTDLRKKYEKQ 94
E+ DL+KK+EK+
Sbjct: 509 ERLERDLKKKHEKE 522
Score = 35 (17.4 bits), Expect = 5.5e-17, Sum P(2) = 5.5e-17
Identities = 11/30 (36%), Positives = 17/30 (56%)
Query: 68 ASGSK-P-RRYTPPPEKPTTDLRKKYEKQP 95
A+GS P RR+ KP+T + K + +P
Sbjct: 291 ANGSDTPDRRHQRQSSKPSTPILIKPKTEP 320
>UNIPROTKB|E2RG62 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0070933 "histone H4 deacetylation"
evidence=IEA] [GO:0070932 "histone H3 deacetylation" evidence=IEA]
[GO:0051304 "chromosome separation" evidence=IEA] [GO:0043596
"nuclear replication fork" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0035861 "site of
double-strand break" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000729 "DNA double-strand break processing" evidence=IEA]
[GO:0000018 "regulation of DNA recombination" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003677 GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934 GO:GO:0000792
GO:GO:0070932 GO:GO:0070933 GO:GO:0000018
GeneTree:ENSGT00630000089890 GO:GO:0051304 EMBL:AAEX03016768
EMBL:AAEX03016769 Ensembl:ENSCAFT00000015951 Uniprot:E2RG62
Length = 1026
Score = 224 (83.9 bits), Expect = 2.9e-17, P = 2.9e-17
Identities = 48/104 (46%), Positives = 63/104 (60%)
Query: 93 KQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGH 152
+QP L+ + + L YQ G+NWL ++ ILADEMGLGKTIQ I FL L++EG+
Sbjct: 486 EQPSILNQS-LSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQEGN 544
Query: 153 CKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLR 196
KGP L+ P STI NW RE W P V+ Y G ++ R +R
Sbjct: 545 -KGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIR 587
>UNIPROTKB|J9NX47 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 GeneTree:ENSGT00630000089890
EMBL:AAEX03016768 EMBL:AAEX03016769 Ensembl:ENSCAFT00000044961
Uniprot:J9NX47
Length = 1026
Score = 224 (83.9 bits), Expect = 2.9e-17, P = 2.9e-17
Identities = 48/104 (46%), Positives = 63/104 (60%)
Query: 93 KQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGH 152
+QP L+ + + L YQ G+NWL ++ ILADEMGLGKTIQ I FL L++EG+
Sbjct: 486 EQPSILNQS-LSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQEGN 544
Query: 153 CKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLR 196
KGP L+ P STI NW RE W P V+ Y G ++ R +R
Sbjct: 545 -KGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIR 587
>UNIPROTKB|J9PA79 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 GeneTree:ENSGT00630000089890
OMA:KNQRGIQ EMBL:AAEX03016768 EMBL:AAEX03016769
Ensembl:ENSCAFT00000043847 Uniprot:J9PA79
Length = 1026
Score = 224 (83.9 bits), Expect = 2.9e-17, P = 2.9e-17
Identities = 48/104 (46%), Positives = 63/104 (60%)
Query: 93 KQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGH 152
+QP L+ + + L YQ G+NWL ++ ILADEMGLGKTIQ I FL L++EG+
Sbjct: 486 EQPSILNQS-LSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQEGN 544
Query: 153 CKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLR 196
KGP L+ P STI NW RE W P V+ Y G ++ R +R
Sbjct: 545 -KGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIR 587
>UNIPROTKB|E1B7X9 [details] [associations]
symbol:SMARCAD1 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A containing
DEAD/H box 1" species:9913 "Bos taurus" [GO:0035861 "site of
double-strand break" evidence=ISS] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=ISS] [GO:0000729 "DNA double-strand
break processing" evidence=ISS] [GO:0070933 "histone H4
deacetylation" evidence=ISS] [GO:0070932 "histone H3 deacetylation"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0000792
"heterochromatin" evidence=ISS] [GO:0051304 "chromosome separation"
evidence=ISS] [GO:0043596 "nuclear replication fork" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000018 "regulation of
DNA recombination" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043044 SUPFAM:SSF46934
GO:GO:0000792 GO:GO:0070932 GO:GO:0070933 GO:GO:0000729
GO:GO:0000018 GO:GO:0035861 GeneTree:ENSGT00630000089890
GO:GO:0051304 EMBL:DAAA02016925 EMBL:DAAA02016926 IPI:IPI00826348
UniGene:Bt.77636 Ensembl:ENSBTAT00000047936 OMA:KNQRGIQ
Uniprot:E1B7X9
Length = 1028
Score = 224 (83.9 bits), Expect = 2.9e-17, P = 2.9e-17
Identities = 48/104 (46%), Positives = 63/104 (60%)
Query: 93 KQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGH 152
+QP L+ + + L YQ G+NWL ++ ILADEMGLGKTIQ I FL L++EG+
Sbjct: 488 EQPSILNQS-LSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQEGN 546
Query: 153 CKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLR 196
KGP L+ P STI NW RE W P V+ Y G ++ R +R
Sbjct: 547 -KGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIR 589
>UNIPROTKB|F1RWW3 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070933 "histone H4 deacetylation" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0051304
"chromosome separation" evidence=IEA] [GO:0043596 "nuclear
replication fork" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0035861 "site of
double-strand break" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000729 "DNA double-strand break processing" evidence=IEA]
[GO:0000018 "regulation of DNA recombination" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003677 GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934 GO:GO:0000792
GO:GO:0070932 GO:GO:0070933 GO:GO:0000018
GeneTree:ENSGT00630000089890 GO:GO:0051304 OMA:KNQRGIQ
EMBL:CU951443 Ensembl:ENSSSCT00000010066 Uniprot:F1RWW3
Length = 1029
Score = 224 (83.9 bits), Expect = 2.9e-17, P = 2.9e-17
Identities = 48/104 (46%), Positives = 63/104 (60%)
Query: 93 KQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGH 152
+QP L+ + + L YQ G+NWL ++ ILADEMGLGKTIQ I FL L++EG+
Sbjct: 489 EQPSILNQS-LSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQEGN 547
Query: 153 CKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLR 196
KGP L+ P STI NW RE W P V+ Y G ++ R +R
Sbjct: 548 -KGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIR 590
>UNIPROTKB|Q86WJ1 [details] [associations]
symbol:CHD1L "Chromodomain-helicase-DNA-binding protein
1-like" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IDA] [GO:0016887 "ATPase activity"
evidence=IMP] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=TAS] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0006281 "DNA repair" evidence=TAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0006200 "ATP
catabolic process" evidence=IMP] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
GO:GO:0003677 GO:GO:0006281 EMBL:AL356378 GO:GO:0006338
GO:GO:0004003 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589 PROSITE:PS51154
CTD:9557 HOVERGEN:HBG077542 OrthoDB:EOG4SXNBV EMBL:AF537213
EMBL:AK001342 EMBL:AK027631 EMBL:EF560738 EMBL:BC001171
EMBL:BC005038 EMBL:BC008649 EMBL:BC043501 EMBL:BC077717
EMBL:AK223496 IPI:IPI00329088 IPI:IPI00854584 IPI:IPI00890729
IPI:IPI00890749 RefSeq:NP_001243265.1 RefSeq:NP_001243266.1
RefSeq:NP_001243267.1 RefSeq:NP_004275.4 RefSeq:NP_078844.2
RefSeq:XP_003960255.1 RefSeq:XP_003960264.1 UniGene:Hs.191164
ProteinModelPortal:Q86WJ1 SMR:Q86WJ1 DIP:DIP-48933N IntAct:Q86WJ1
STRING:Q86WJ1 PhosphoSite:Q86WJ1 DMDM:311033359 PaxDb:Q86WJ1
PRIDE:Q86WJ1 Ensembl:ENST00000369258 Ensembl:ENST00000369259
Ensembl:ENST00000431239 Ensembl:ENST00000579763
Ensembl:ENST00000583055 GeneID:101060601 GeneID:9557
KEGG:hsa:101060601 KEGG:hsa:9557 UCSC:uc001epm.4 UCSC:uc001epo.4
UCSC:uc009wjh.3 GeneCards:GC01P146717 H-InvDB:HIX0000988
H-InvDB:HIX0028745 HGNC:HGNC:1916 HPA:HPA027789 HPA:HPA028670
MIM:613039 neXtProt:NX_Q86WJ1 PharmGKB:PA26452 InParanoid:Q86WJ1
OMA:TCQTIAL PhylomeDB:Q86WJ1 ChiTaRS:CHD1L GenomeRNAi:9557
NextBio:35849 ArrayExpress:Q86WJ1 Bgee:Q86WJ1 CleanEx:HS_CHD1L
Genevestigator:Q86WJ1 Uniprot:Q86WJ1
Length = 897
Score = 223 (83.6 bits), Expect = 3.1e-17, P = 3.1e-17
Identities = 47/103 (45%), Positives = 61/103 (59%)
Query: 101 TGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVS 160
TG+ L +YQLEG+NWL + IL DEMGLGKT QTI L + +GPFL+
Sbjct: 42 TGIHLRSYQLEGVNWLAQRFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLNDEGPFLIL 101
Query: 161 APLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWE 203
PLS + NW+ E + +AP VTY GDK+ R L+ D+ E
Sbjct: 102 CPLSVLSNWKEEMQRFAPGLSCVTYAGDKEERACLQQ-DLKQE 143
>ASPGD|ASPL0000041040 [details] [associations]
symbol:AN9077 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0000812 "Swr1
complex" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 EMBL:BN001306 GO:GO:0006351
GO:GO:0016568 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529
PROSITE:PS51204 GO:GO:0008026 EMBL:AACD01000169 KO:K11681
RefSeq:XP_682346.1 STRING:Q5ARK3 GeneID:2868023 KEGG:ani:AN9077.2
HOGENOM:HOG000186095 OMA:YGNQEER OrthoDB:EOG49S9FK Uniprot:Q5ARK3
Length = 1698
Score = 226 (84.6 bits), Expect = 3.5e-17, P = 3.5e-17
Identities = 58/143 (40%), Positives = 74/143 (51%)
Query: 63 EDEDGASGSKP-RRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWG 121
E E +S P ++ P E P L+ P L T L YQ G++WL +
Sbjct: 788 EPESVSSIEAPAEKHAQPSESPGPGLKTPI---PHLLRGT---LREYQHFGLDWLAGLYS 841
Query: 122 QNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFY 181
+I+ ILADEMGLGKTIQTI L L E GP LV P S I+NWE EF+ W P F
Sbjct: 842 NHINGILADEMGLGKTIQTIALLAHLAVEHGVWGPHLVVVPTSVILNWEMEFKKWCPGFK 901
Query: 182 VVTYVGDKDCRIVLRDHDISWED 204
++TY G+++ R R W D
Sbjct: 902 IMTYYGNQEER---RQKRRGWMD 921
>UNIPROTKB|F1SDB8 [details] [associations]
symbol:CHD1L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0006974 GO:GO:0006338
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589
PROSITE:PS51154 GO:GO:0008026 OMA:TCQTIAL
GeneTree:ENSGT00670000098110 EMBL:CU462855
Ensembl:ENSSSCT00000007340 Uniprot:F1SDB8
Length = 905
Score = 222 (83.2 bits), Expect = 4.0e-17, P = 4.0e-17
Identities = 59/147 (40%), Positives = 79/147 (53%)
Query: 61 LQEDEDGAS-GSKPRRYTPPPEKPTTDL-RKKYEKQP-PFLDDTGMQLHAYQLEGINWLR 117
++ E G S G+ PR + T+ R + ++Q TG+ L YQLEG+NWL
Sbjct: 1 MERAEAGTSAGNMPRFLLALQSQSRTEAERARVQEQDLRRWGLTGIHLRPYQLEGVNWLA 60
Query: 118 YSWGQNIDTILADEMGLGKTIQTIT-FLYSLFKEGHCKGPFLVSAPLSTIINWEREFETW 176
+ IL DEMGLGKT QTI F+Y L + +GPFL+ PLS + NW+ E E
Sbjct: 61 QCFHYQNGCILGDEMGLGKTCQTIAVFIY-LAGRLNDEGPFLILCPLSVLSNWKEEMERC 119
Query: 177 APDFYVVTYVGDKDCRIVLRDHDISWE 203
AP VTY GDK+ R L+ D+ E
Sbjct: 120 APGLCCVTYAGDKEERAHLQQ-DLKQE 145
>SGD|S000005816 [details] [associations]
symbol:SNF2 "Catalytic subunit of the SWI/SNF chromatin
remodeling complex" species:4932 "Saccharomyces cerevisiae"
[GO:0006261 "DNA-dependent DNA replication" evidence=IMP]
[GO:0016514 "SWI/SNF complex" evidence=IDA;IMP] [GO:0006338
"chromatin remodeling" evidence=IGI;IMP] [GO:0031496 "positive
regulation of mating type switching" evidence=IMP] [GO:0031492
"nucleosomal DNA binding" evidence=IDA] [GO:0042766 "nucleosome
mobilization" evidence=IMP;IDA] [GO:0006302 "double-strand break
repair" evidence=IMP] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IMP;IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IGI;IMP] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IMP;IDA]
[GO:0044109 "cellular alcohol catabolic process" evidence=IMP]
[GO:0005987 "sucrose catabolic process" evidence=IMP] [GO:0070577
"histone acetyl-lysine binding" evidence=IMP;IDA] [GO:0042148
"strand invasion" evidence=IMP] [GO:0061412 "positive regulation of
transcription from RNA polymerase II promoter in response to amino
acid starvation" evidence=IMP] [GO:0001102 "RNA polymerase II
activating transcription factor binding" evidence=IPI]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR014978 InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00384 SMART:SM00490
SMART:SM00951 SGD:S000005816 GO:GO:0005524 EMBL:BK006948
GO:GO:0006351 GO:GO:0006261 GO:GO:0016514 GO:GO:0006302
GO:GO:0004386 GO:GO:0005987 GO:GO:0042766 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043044
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 GO:GO:0070577
InterPro:IPR018359 GeneTree:ENSGT00550000074659 InterPro:IPR014012
PROSITE:PS51204 EMBL:X89633 GO:GO:0008094 HOGENOM:HOG000172362
GO:GO:0031492 RefSeq:NP_014933.3 GeneID:854465 KEGG:sce:YOR290C
KO:K11786 GO:GO:0061412 GO:GO:0042148 OrthoDB:EOG4D565R EMBL:M61703
EMBL:X57837 EMBL:D90459 EMBL:Z75198 EMBL:Z75199 PIR:S15047
RefSeq:NP_014935.3 ProteinModelPortal:P22082 SMR:P22082
DIP:DIP-1150N IntAct:P22082 MINT:MINT-600461 STRING:P22082
PaxDb:P22082 PeptideAtlas:P22082 EnsemblFungi:YOR290C GeneID:854467
KEGG:sce:YOR292C CYGD:YOR290c OMA:HPNFLSK NextBio:976750
Genevestigator:P22082 GermOnline:YOR290C GO:GO:0044109
GO:GO:0031496 Uniprot:P22082
Length = 1703
Score = 225 (84.3 bits), Expect = 4.4e-17, P = 4.4e-17
Identities = 44/106 (41%), Positives = 67/106 (63%)
Query: 87 LRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYS 146
+++ +KQP L G L YQ++G+ W+ + +++ ILADEMGLGKTIQTI+ L
Sbjct: 751 IKEDIKKQPSIL--VGGTLKDYQIKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTY 808
Query: 147 LFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCR 192
L++ + +GP+LV PLST+ NW EF WAP +++ G + R
Sbjct: 809 LYEMKNIRGPYLVIVPLSTLSNWSSEFAKWAPTLRTISFKGSPNER 854
>UNIPROTKB|F1P3Q4 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007420 "brain development" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0016589 "NURF
complex" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0036310 "annealing helicase activity"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044
GO:GO:0016589 GO:GO:0008094 GeneTree:ENSGT00680000100002
SUPFAM:SSF101224 OMA:PMSQKRK EMBL:AADN02013587 EMBL:AADN02013588
IPI:IPI00594974 Ensembl:ENSGALT00000013737 Uniprot:F1P3Q4
Length = 982
Score = 222 (83.2 bits), Expect = 4.5e-17, P = 4.5e-17
Identities = 46/117 (39%), Positives = 68/117 (58%)
Query: 82 KPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTI 141
+ T+++ ++E+ P ++ G L YQ+ G+NW+ + ++ ILADEMGLGKT+QTI
Sbjct: 86 RKTSNVCIRFEESPSYVK--GGTLRDYQVRGLNWMISLYENGVNGILADEMGLGKTLQTI 143
Query: 142 TFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIV-LRD 197
L L + GP +V P ST+ NW EF+ W P V +GDKD R +RD
Sbjct: 144 ALLGYLKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPSLRAVCLIGDKDARAAFIRD 200
>ASPGD|ASPL0000037473 [details] [associations]
symbol:AN2973 species:162425 "Emericella nidulans"
[GO:0000729 "DNA double-strand break processing" evidence=IEA]
[GO:0070870 "heterochromatin maintenance involved in chromatin
silencing" evidence=IEA] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0000183 "chromatin
silencing at rDNA" evidence=IEA] [GO:0070869 "heterochromatin
assembly involved in chromatin silencing" evidence=IEA] [GO:0006348
"chromatin silencing at telomere" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0031934 "mating-type region heterochromatin" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000775 "chromosome,
centromeric region" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003677 EMBL:BN001306 EMBL:AACD01000051
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 OrthoDB:EOG4BCHW4 KO:K14439 HOGENOM:HOG000195581
RefSeq:XP_660577.1 ProteinModelPortal:Q5B907
EnsemblFungi:CADANIAT00010107 GeneID:2874181 KEGG:ani:AN2973.2
OMA:QQVGINW Uniprot:Q5B907
Length = 1107
Score = 222 (83.2 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 51/132 (38%), Positives = 75/132 (56%)
Query: 67 GASGSKPRRYTPPPEKPTTDLRK-KYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNID 125
G S+P + P + RK ++ QP + + +++ YQ+ GINWL + +
Sbjct: 528 GTPASQPS--DEDSDGPGSRSRKARFISQPGIMAED-LKMKNYQIVGINWLSLLFENELS 584
Query: 126 TILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTY 185
ILAD+MGLGKT Q I FL L+++G KGP LV P STI NW REF+ + P V+ Y
Sbjct: 585 CILADDMGLGKTCQVIAFLAHLYEKG-IKGPHLVVVPSSTIENWLREFQKFCPTLSVMPY 643
Query: 186 VGDKDCRIVLRD 197
D++ R +R+
Sbjct: 644 YADQNVRAQIRE 655
>UNIPROTKB|K7GT64 [details] [associations]
symbol:LOC100622433 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00550000074659 EMBL:FP102365
Ensembl:ENSSSCT00000034320 Uniprot:K7GT64
Length = 980
Score = 221 (82.9 bits), Expect = 5.7e-17, P = 5.7e-17
Identities = 45/104 (43%), Positives = 63/104 (60%)
Query: 89 KKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLF 148
++ +KQ + + G+ L YQ++G+ WL + N++ ILADEMGLGKTIQTI + L
Sbjct: 73 ERVDKQSALMVN-GV-LKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLM 130
Query: 149 KEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCR 192
+ GPFL+ PLST+ NW EF+ WAP V+Y G R
Sbjct: 131 EHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAAR 174
>UNIPROTKB|F1SSV0 [details] [associations]
symbol:INO80 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000045 "regulation of G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0071479 "cellular response to ionizing
radiation" evidence=IEA] [GO:0070914 "UV-damage excision repair"
evidence=IEA] [GO:0051225 "spindle assembly" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043014 "alpha-tubulin
binding" evidence=IEA] [GO:0034644 "cellular response to UV"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0030307
"positive regulation of cell growth" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0010571 "positive regulation of
DNA replication involved in S phase" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0003678 "DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0030307
GO:GO:0051225 GO:GO:0003677 GO:GO:0045944 GO:GO:0016887
GO:GO:0006338 GO:GO:0000070 GO:GO:0031011 GO:GO:0000724
GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914 GO:GO:2000045
GO:GO:0010571 KO:K11665 CTD:54617 GeneTree:ENSGT00680000100052
OMA:KVIRKFW EMBL:FP015925 RefSeq:XP_003121636.1 UniGene:Ssc.45003
Ensembl:ENSSSCT00000005252 GeneID:100517567 KEGG:ssc:100517567
Uniprot:F1SSV0
Length = 1566
Score = 218 (81.8 bits), Expect = 5.8e-17, Sum P(2) = 5.8e-17
Identities = 44/93 (47%), Positives = 61/93 (65%)
Query: 104 QLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPL 163
+L YQL+G+NWL + Q I+ ILADEMGLGKT+Q+I L L + + GPFL+ +P
Sbjct: 526 KLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLIISPA 585
Query: 164 STIINWEREFETWAPDFYVVTYVGDKDCRIVLR 196
ST+ NW +EF + P F V+ Y G+ R V+R
Sbjct: 586 STLNNWHQEFTRFVPKFKVLPYWGNPHDRKVIR 618
Score = 34 (17.0 bits), Expect = 5.8e-17, Sum P(2) = 5.8e-17
Identities = 6/15 (40%), Positives = 11/15 (73%)
Query: 62 QEDEDGASGSKPRRY 76
++DE+ +S PRR+
Sbjct: 239 RKDEEVSSEESPRRH 253
>UNIPROTKB|F1P5V4 [details] [associations]
symbol:HELLS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0001655 "urogenital system development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005721 "centromeric
heterochromatin" evidence=IEA] [GO:0006346 "methylation-dependent
chromatin silencing" evidence=IEA] [GO:0010216 "maintenance of DNA
methylation" evidence=IEA] [GO:0031508 "centromeric heterochromatin
assembly" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0046651 "lymphocyte
proliferation" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216 OMA:ETFYTAI
GO:GO:0006346 GO:GO:0046651 GeneTree:ENSGT00550000075106
EMBL:AADN02027839 EMBL:AADN02027838 IPI:IPI00823178
Ensembl:ENSGALT00000008749 ArrayExpress:F1P5V4 Uniprot:F1P5V4
Length = 839
Score = 220 (82.5 bits), Expect = 5.8e-17, P = 5.8e-17
Identities = 55/134 (41%), Positives = 74/134 (55%)
Query: 60 ELQEDEDGASGSKPR--RYTPPPEKPTTDLRKKYEKQP-PFLDD---TGMQLHAYQLEGI 113
+LQ++ D S K R + K D +K+ QP PF TG + YQ+EG+
Sbjct: 171 DLQKNGDSNSVIKDRLCQAVRHSAKQFLDPVRKFNGQPVPFQQPKIFTGGVMRWYQVEGM 230
Query: 114 NWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREF 173
WLR W I+ ILADEMGLGKTIQ I + + + G GPFLV PLST+ NW EF
Sbjct: 231 EWLRMLWENGINGILADEMGLGKTIQCIATIALMVERG-VPGPFLVCGPLSTLPNWMSEF 289
Query: 174 ETWAPDFYVVTYVG 187
+ + P+ ++ Y G
Sbjct: 290 KRFTPEIPLMLYHG 303
>DICTYBASE|DDB_G0292358 [details] [associations]
symbol:ino80 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0031011 "Ino80 complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0006338 "chromatin remodeling" evidence=ISS] [GO:0006281 "DNA
repair" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
dictyBase:DDB_G0292358 GO:GO:0005524 GenomeReviews:CM000155_GR
GO:GO:0003677 GO:GO:0006281 GO:GO:0016887 GO:GO:0006338
GO:GO:0006366 GO:GO:0031011 GO:GO:0004386 EMBL:AAFI02000189
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K11665 RefSeq:XP_629681.1 ProteinModelPortal:Q54DG0
STRING:Q54DG0 PRIDE:Q54DG0 EnsemblProtists:DDB0233012
GeneID:8628597 KEGG:ddi:DDB_G0292358 InParanoid:Q54DG0 OMA:MINILED
ProtClustDB:CLSZ2497087 Uniprot:Q54DG0
Length = 2129
Score = 219 (82.2 bits), Expect = 5.8e-17, Sum P(2) = 5.8e-17
Identities = 51/120 (42%), Positives = 68/120 (56%)
Query: 79 PPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTI 138
PP T D K QP L+ L YQL+G+ W+ + Q I+ ILADEMGLGKTI
Sbjct: 1143 PPGFSTADTLK----QPTILN---ADLKPYQLKGMTWIVNLYDQGINGILADEMGLGKTI 1195
Query: 139 QTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDH 198
Q+I L L +E + GPFL+ P ST+ NW+ EF + P F V+ Y G + R +R +
Sbjct: 1196 QSIAVLAHLAEEKNIWGPFLIVTPKSTLHNWKNEFAKFVPAFKVIPYWGTQQQRTTIRKY 1255
Score = 36 (17.7 bits), Expect = 5.8e-17, Sum P(2) = 5.8e-17
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 69 SGSKPRRYTPPPEKPTT 85
S S ++++ PP K TT
Sbjct: 172 SSSSSKQFSLPPLKSTT 188
>UNIPROTKB|F1S594 [details] [associations]
symbol:LOC100622433 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
GeneTree:ENSGT00550000074659 EMBL:FP102365
Ensembl:ENSSSCT00000014884 OMA:KSSGHER Uniprot:F1S594
Length = 866
Score = 220 (82.5 bits), Expect = 6.1e-17, P = 6.1e-17
Identities = 42/88 (47%), Positives = 54/88 (61%)
Query: 105 LHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLS 164
L YQ++G+ WL + N++ ILADEMGLGKTIQTI + L + GPFL+ PLS
Sbjct: 6 LKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLS 65
Query: 165 TIINWEREFETWAPDFYVVTYVGDKDCR 192
T+ NW EF+ WAP V+Y G R
Sbjct: 66 TLSNWAYEFDKWAPSVVKVSYKGSPAAR 93
>UNIPROTKB|F1SC64 [details] [associations]
symbol:HELLS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046651 "lymphocyte proliferation" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0031508 "centromeric heterochromatin assembly"
evidence=IEA] [GO:0010216 "maintenance of DNA methylation"
evidence=IEA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001655 "urogenital system
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
GO:GO:0001655 GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216
OMA:ETFYTAI GO:GO:0006346 GO:GO:0046651
GeneTree:ENSGT00550000075106 EMBL:CU468514
Ensembl:ENSSSCT00000011474 Uniprot:F1SC64
Length = 838
Score = 219 (82.2 bits), Expect = 7.4e-17, P = 7.4e-17
Identities = 57/145 (39%), Positives = 77/145 (53%)
Query: 60 ELQEDEDGASGSKPR--RYTPPPEKPTTDLRKKYEKQP-PFLDD---TGMQLHAYQLEGI 113
+LQ++ D S K R + K D +K QP PF TG + YQ+EG+
Sbjct: 172 DLQKNRDSNSIIKDRLSQTVRQNTKFFFDPVRKCNGQPVPFQQPKHFTGGVMRWYQVEGM 231
Query: 114 NWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREF 173
WLR W I+ ILADEMGLGKT+Q I + + + G GPFLV PLST+ NW EF
Sbjct: 232 EWLRMLWENGINGILADEMGLGKTVQCIATIALMIQRG-VPGPFLVCGPLSTLPNWMAEF 290
Query: 174 ETWAPDFYVVTYVGDKDCRIVLRDH 198
+ + P+ + Y G + R L +H
Sbjct: 291 QRFTPEIPTMLYHGSQQERRKLVNH 315
>UNIPROTKB|E1C0M8 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0031491 "nucleosome binding" evidence=IEA] [GO:0000183
"chromatin silencing at rDNA" evidence=IEA] [GO:0000793 "condensed
chromosome" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005677 "chromatin
silencing complex" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IEA]
[GO:0009790 "embryo development" evidence=IEA] [GO:0016584
"nucleosome positioning" evidence=IEA] [GO:0016589 "NURF complex"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0031213 "RSF complex" evidence=IEA] [GO:0042393 "histone
binding" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0043596 "nuclear replication fork"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0005730
GO:GO:0003677 GO:GO:0006352 GO:GO:0016887 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0043596 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0000183 GO:GO:0006302 GO:GO:0004386 GO:GO:0000793
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
GO:GO:0043044 GO:GO:0016584 GO:GO:0006334 GO:GO:0005677
GO:GO:0016589 GeneTree:ENSGT00680000100002 SUPFAM:SSF101224
OMA:EDYCHWR GO:GO:0031213 EMBL:AADN02016239 EMBL:AADN02016240
IPI:IPI00577188 Ensembl:ENSGALT00000016121 ArrayExpress:E1C0M8
Uniprot:E1C0M8
Length = 1038
Score = 220 (82.5 bits), Expect = 8.0e-17, P = 8.0e-17
Identities = 48/115 (41%), Positives = 69/115 (60%)
Query: 84 TTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITF 143
TT++ ++E+ P ++ G +L YQ+ G+NWL + I+ ILADEMGLGKT+QTI+
Sbjct: 146 TTNVCTRFEESPSYVK-WG-KLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISL 203
Query: 144 LYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIV-LRD 197
L + + GP +V P ST+ NW EF+ W P V +GDKD R +RD
Sbjct: 204 LGYMKHYRNIPGPHMVLVPKSTLHNWMNEFKRWVPTLRAVCLIGDKDQRAAFVRD 258
>UNIPROTKB|D4A4J2 [details] [associations]
symbol:Smarca2 "Protein Smarca2" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
Pfam:PF08880 PROSITE:PS51194 SMART:SM00490 SMART:SM00592
SMART:SM00951 RGD:1302988 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
IPI:IPI00777186 Ensembl:ENSRNOT00000016283 ArrayExpress:D4A4J2
Uniprot:D4A4J2
Length = 1506
Score = 222 (83.2 bits), Expect = 8.0e-17, P = 8.0e-17
Identities = 44/101 (43%), Positives = 62/101 (61%)
Query: 87 LRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYS 146
+ ++ EKQ L + G H YQL+G+ W+ + N++ ILADEMGLGKTIQTI +
Sbjct: 715 ISERVEKQSALLIN-GTLKH-YQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITY 772
Query: 147 LFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVG 187
L + GP+L+ PLST+ NW EF+ WAP ++Y G
Sbjct: 773 LMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKG 813
>DICTYBASE|DDB_G0293012 [details] [associations]
symbol:DDB_G0293012 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISS] InterPro:IPR000330 InterPro:IPR000626
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00213 SMART:SM00298
SMART:SM00490 dictyBase:DDB_G0293012 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0006357 GO:GO:0004003
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
EMBL:AAFI02000199 InterPro:IPR022617 Pfam:PF11976
RefSeq:XP_629261.1 ProteinModelPortal:Q54CF8
EnsemblProtists:DDB0220643 GeneID:8628981 KEGG:ddi:DDB_G0293012
InParanoid:Q54CF8 OMA:IMINEDI Uniprot:Q54CF8
Length = 3071
Score = 223 (83.6 bits), Expect = 8.1e-17, Sum P(2) = 8.1e-17
Identities = 54/135 (40%), Positives = 75/135 (55%)
Query: 72 KPRRYTPPPEK-PTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILAD 130
+P++Y P K P + E P F D+ + L +Q+EG WL Y W ++LAD
Sbjct: 870 QPKKYVNRPTKLPIFN----NELVPKFQDN--LSLKEFQVEGFLWLSYCWYHCRSSLLAD 923
Query: 131 EMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKD 190
EMGLGKTIQ+I FL L + KGPFLV APLST+ NW +E W +V Y G ++
Sbjct: 924 EMGLGKTIQSIAFLQYLSQSVGIKGPFLVVAPLSTLGNWHKEILKWTKMKTLVFY-GSQE 982
Query: 191 CRIVLRDHDISWEDT 205
R + ++ +DT
Sbjct: 983 TRGFISKYEFKHKDT 997
Score = 34 (17.0 bits), Expect = 8.1e-17, Sum P(2) = 8.1e-17
Identities = 6/15 (40%), Positives = 8/15 (53%)
Query: 70 GSKPRRYTPPPEKPT 84
G + TPPP P+
Sbjct: 285 GGTTAQSTPPPPPPS 299
>UNIPROTKB|E1C2F7 [details] [associations]
symbol:E1C2F7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IEA] [GO:0008285
"negative regulation of cell proliferation" evidence=IEA]
[GO:0016514 "SWI/SNF complex" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0035887 "aortic smooth
muscle cell differentiation" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0045111 "intermediate filament cytoskeleton" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565
"nBAF complex" evidence=IEA] [GO:0071778 "WINAC complex"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0045892 GO:GO:0008285 GO:GO:0030308 GO:GO:0045944
GO:GO:0044212 GO:GO:0045111 GO:GO:0000790 GO:GO:0071564
GO:GO:0016514 GO:GO:0071565 GO:GO:0004386 GO:GO:0001105
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
OMA:PQEGMHQ EMBL:AADN02068434 EMBL:AADN02068435 EMBL:AADN02068436
EMBL:AADN02068437 EMBL:AADN02068438 EMBL:AADN02068439
EMBL:AADN02068440 EMBL:AADN02068441 IPI:IPI00583413
Ensembl:ENSGALT00000016528 Uniprot:E1C2F7
Length = 1546
Score = 222 (83.2 bits), Expect = 8.2e-17, P = 8.2e-17
Identities = 44/101 (43%), Positives = 62/101 (61%)
Query: 87 LRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYS 146
+ ++ EKQ L + G H YQL+G+ W+ + N++ ILADEMGLGKTIQTI +
Sbjct: 682 ITERVEKQSSLLIN-GTLKH-YQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITY 739
Query: 147 LFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVG 187
L + GP+L+ PLST+ NW EF+ WAP ++Y G
Sbjct: 740 LMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKG 780
>UNIPROTKB|A5PKK5 [details] [associations]
symbol:SMARCA2 "SMARCA2 protein" species:9913 "Bos taurus"
[GO:0071778 "WINAC complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0016514 "SWI/SNF complex"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0045892
GO:GO:0008285 GO:GO:0030308 GO:GO:0045944 GO:GO:0044212
GO:GO:0045111 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
GO:GO:0071565 GO:GO:0004386 GO:GO:0001105 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
KO:K11647 GeneTree:ENSGT00550000074659 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 CTD:6595 HOGENOM:HOG000172363 HOVERGEN:HBG056636
OMA:PQEGMHQ GO:GO:0035887 OrthoDB:EOG418BMJ EMBL:DAAA02022747
EMBL:DAAA02022748 EMBL:DAAA02022749 EMBL:BC142521 IPI:IPI00854472
RefSeq:NP_001092585.1 UniGene:Bt.63204 SMR:A5PKK5 STRING:A5PKK5
Ensembl:ENSBTAT00000035681 GeneID:540904 KEGG:bta:540904
InParanoid:A5PKK5 NextBio:20878906 Uniprot:A5PKK5
Length = 1554
Score = 222 (83.2 bits), Expect = 8.3e-17, P = 8.3e-17
Identities = 44/101 (43%), Positives = 62/101 (61%)
Query: 87 LRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYS 146
+ ++ EKQ L + G H YQL+G+ W+ + N++ ILADEMGLGKTIQTI +
Sbjct: 690 ISERVEKQSALLIN-GTLKH-YQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITY 747
Query: 147 LFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVG 187
L + GP+L+ PLST+ NW EF+ WAP ++Y G
Sbjct: 748 LMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKG 788
>UNIPROTKB|E2RKP4 [details] [associations]
symbol:SMARCA2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0071778 "WINAC complex" evidence=IEA]
[GO:0071565 "nBAF complex" evidence=IEA] [GO:0071564 "npBAF
complex" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045111
"intermediate filament cytoskeleton" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0035887 "aortic smooth muscle cell differentiation"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0016514 "SWI/SNF complex" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 GO:GO:0005524 GO:GO:0045892 GO:GO:0008285
GO:GO:0030308 GO:GO:0045944 GO:GO:0044212 GO:GO:0045111
GO:GO:0000790 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
GO:GO:0004386 GO:GO:0001105 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0071778 GeneTree:ENSGT00550000074659
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 GO:GO:0035887
EMBL:AAEX03000600 Ensembl:ENSCAFT00000003206 NextBio:20852013
Uniprot:E2RKP4
Length = 1556
Score = 222 (83.2 bits), Expect = 8.3e-17, P = 8.3e-17
Identities = 44/101 (43%), Positives = 62/101 (61%)
Query: 87 LRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYS 146
+ ++ EKQ L + G H YQL+G+ W+ + N++ ILADEMGLGKTIQTI +
Sbjct: 692 ISERVEKQSALLIN-GTLKH-YQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITY 749
Query: 147 LFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVG 187
L + GP+L+ PLST+ NW EF+ WAP ++Y G
Sbjct: 750 LMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKG 790
>UNIPROTKB|F1SJG5 [details] [associations]
symbol:SMARCA2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071778 "WINAC complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0016514 "SWI/SNF complex"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0045892
GO:GO:0008285 GO:GO:0030308 GO:GO:0045944 GO:GO:0044212
GO:GO:0045111 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
GO:GO:0071565 GO:GO:0004386 GO:GO:0001105 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
GeneTree:ENSGT00550000074659 OMA:PQEGMHQ GO:GO:0035887
EMBL:CT998562 EMBL:CU062411 Ensembl:ENSSSCT00000005766
Uniprot:F1SJG5
Length = 1556
Score = 222 (83.2 bits), Expect = 8.3e-17, P = 8.3e-17
Identities = 44/101 (43%), Positives = 62/101 (61%)
Query: 87 LRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYS 146
+ ++ EKQ L + G H YQL+G+ W+ + N++ ILADEMGLGKTIQTI +
Sbjct: 692 ISERVEKQSALLIN-GTLKH-YQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITY 749
Query: 147 LFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVG 187
L + GP+L+ PLST+ NW EF+ WAP ++Y G
Sbjct: 750 LMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKG 790
>UNIPROTKB|J9P5P2 [details] [associations]
symbol:SMARCA2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 KO:K11647
GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
CTD:6595 OMA:PQEGMHQ EMBL:AAEX03000600 RefSeq:XP_850159.1
Ensembl:ENSCAFT00000046362 GeneID:476335 KEGG:cfa:476335
Uniprot:J9P5P2
Length = 1574
Score = 222 (83.2 bits), Expect = 8.4e-17, P = 8.4e-17
Identities = 44/101 (43%), Positives = 62/101 (61%)
Query: 87 LRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYS 146
+ ++ EKQ L + G H YQL+G+ W+ + N++ ILADEMGLGKTIQTI +
Sbjct: 692 ISERVEKQSALLIN-GTLKH-YQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITY 749
Query: 147 LFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVG 187
L + GP+L+ PLST+ NW EF+ WAP ++Y G
Sbjct: 750 LMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKG 790
>MGI|MGI:99603 [details] [associations]
symbol:Smarca2 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=ISO]
[GO:0001105 "RNA polymerase II transcription coactivator activity"
evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006325 "chromatin organization"
evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] [GO:0016514 "SWI/SNF complex"
evidence=ISO;TAS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0035887 "aortic smooth muscle cell differentiation"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0071564 "npBAF complex"
evidence=IDA] [GO:0071565 "nBAF complex" evidence=IDA] [GO:0071778
"WINAC complex" evidence=ISO] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 MGI:MGI:99603 GO:GO:0005524
GO:GO:0045892 GO:GO:0008285 GO:GO:0007399 GO:GO:0030308
GO:GO:0045944 GO:GO:0044212 GO:GO:0045111 GO:GO:0000790
GO:GO:0071564 GO:GO:0016514 GO:GO:0071565 GO:GO:0004386
GO:GO:0001105 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006334 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778 KO:K11647
ChiTaRS:SMARCA2 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
CTD:6595 HOGENOM:HOG000172363 HOVERGEN:HBG056636 GO:GO:0035887
EMBL:BC075641 IPI:IPI01018407 RefSeq:NP_035546.2 UniGene:Mm.313303
ProteinModelPortal:Q6DIC0 SMR:Q6DIC0 DIP:DIP-48888N STRING:Q6DIC0
PhosphoSite:Q6DIC0 PaxDb:Q6DIC0 PRIDE:Q6DIC0 GeneID:67155
KEGG:mmu:67155 UCSC:uc008hbn.1 InParanoid:Q6DIC0 OrthoDB:EOG418BMJ
NextBio:323746 Bgee:Q6DIC0 Genevestigator:Q6DIC0 Uniprot:Q6DIC0
Length = 1577
Score = 222 (83.2 bits), Expect = 8.4e-17, P = 8.4e-17
Identities = 44/101 (43%), Positives = 62/101 (61%)
Query: 87 LRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYS 146
+ ++ EKQ L + G H YQL+G+ W+ + N++ ILADEMGLGKTIQTI +
Sbjct: 713 ISERVEKQSALLIN-GTLKH-YQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITY 770
Query: 147 LFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVG 187
L + GP+L+ PLST+ NW EF+ WAP ++Y G
Sbjct: 771 LMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKG 811
>UNIPROTKB|P51531 [details] [associations]
symbol:SMARCA2 "Probable global transcription activator
SNF2L2" species:9606 "Homo sapiens" [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0035887 "aortic
smooth muscle cell differentiation" evidence=IEA] [GO:0016514
"SWI/SNF complex" evidence=IDA] [GO:0071564 "npBAF complex"
evidence=ISS] [GO:0071565 "nBAF complex" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP;IDA] [GO:0001105 "RNA
polymerase II transcription coactivator activity" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IDA] [GO:0003713
"transcription coactivator activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0071778 "WINAC
complex" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0030308 "negative regulation of cell
growth" evidence=IMP] [GO:0006338 "chromatin remodeling"
evidence=TAS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=TAS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0045111 "intermediate
filament cytoskeleton" evidence=IDA] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 GO:GO:0005524 GO:GO:0008285 GO:GO:0007399
GO:GO:0005654 GO:GO:0030308 GO:GO:0006338 GO:GO:0000122
GO:GO:0044212 GO:GO:0045111 GO:GO:0000790 GO:GO:0071564
GO:GO:0016514 GO:GO:0071565 EMBL:CH471071 GO:GO:0004386
Pathway_Interaction_DB:ar_tf_pathway GO:GO:0001105 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
KO:K11647 ChiTaRS:SMARCA2 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GO:GO:0008094 EMBL:X72889 EMBL:D26155 EMBL:AL359076 EMBL:AL138755
IPI:IPI00386718 IPI:IPI00514648 PIR:S39580 PIR:S45251
RefSeq:NP_003061.3 RefSeq:NP_620614.2 UniGene:Hs.298990 PDB:2DAT
PDBsum:2DAT ProteinModelPortal:P51531 SMR:P51531 DIP:DIP-29005N
IntAct:P51531 MINT:MINT-1898892 STRING:P51531 PhosphoSite:P51531
DMDM:212276472 PaxDb:P51531 PRIDE:P51531 DNASU:6595
Ensembl:ENST00000349721 Ensembl:ENST00000357248
Ensembl:ENST00000382194 Ensembl:ENST00000382203 GeneID:6595
KEGG:hsa:6595 UCSC:uc003zhc.3 UCSC:uc003zhd.3 CTD:6595
GeneCards:GC09P002005 HGNC:HGNC:11098 HPA:HPA029981 MIM:600014
MIM:601358 neXtProt:NX_P51531 Orphanet:3051 PharmGKB:PA35948
HOGENOM:HOG000172363 HOVERGEN:HBG056636 InParanoid:P51531
OMA:PQEGMHQ PhylomeDB:P51531 EvolutionaryTrace:P51531
GenomeRNAi:6595 NextBio:25649 PMAP-CutDB:P51531 ArrayExpress:P51531
Bgee:P51531 CleanEx:HS_SMARCA2 Genevestigator:P51531
GermOnline:ENSG00000080503 GO:GO:0035887 Uniprot:P51531
Length = 1590
Score = 222 (83.2 bits), Expect = 8.5e-17, P = 8.5e-17
Identities = 44/101 (43%), Positives = 62/101 (61%)
Query: 87 LRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYS 146
+ ++ EKQ L + G H YQL+G+ W+ + N++ ILADEMGLGKTIQTI +
Sbjct: 708 ISERVEKQSALLIN-GTLKH-YQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITY 765
Query: 147 LFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVG 187
L + GP+L+ PLST+ NW EF+ WAP ++Y G
Sbjct: 766 LMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKG 806
>UNIPROTKB|E9PTG1 [details] [associations]
symbol:Smarca2 "Protein Smarca2" species:10116 "Rattus
norvegicus" [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0001105 "RNA polymerase II transcription coactivator activity"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0016514
"SWI/SNF complex" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0045111
"intermediate filament cytoskeleton" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] [GO:0071778 "WINAC complex" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 RGD:1302988 GO:GO:0005524 GO:GO:0045892
GO:GO:0008285 GO:GO:0030308 GO:GO:0045944 GO:GO:0044212
GO:GO:0045111 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
GO:GO:0071565 GO:GO:0004386 GO:GO:0001105 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
OMA:PQEGMHQ GO:GO:0035887 IPI:IPI00464435
Ensembl:ENSRNOT00000016740 ArrayExpress:E9PTG1 Uniprot:E9PTG1
Length = 1597
Score = 222 (83.2 bits), Expect = 8.6e-17, P = 8.6e-17
Identities = 44/101 (43%), Positives = 62/101 (61%)
Query: 87 LRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYS 146
+ ++ EKQ L + G H YQL+G+ W+ + N++ ILADEMGLGKTIQTI +
Sbjct: 715 ISERVEKQSALLIN-GTLKH-YQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITY 772
Query: 147 LFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVG 187
L + GP+L+ PLST+ NW EF+ WAP ++Y G
Sbjct: 773 LMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPSVVKISYKG 813
>CGD|CAL0001763 [details] [associations]
symbol:orf19.1871 species:5476 "Candida albicans" [GO:0000812
"Swr1 complex" evidence=IEA] [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
CGD:CAL0001763 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0016568 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
EMBL:AACQ01000133 EMBL:AACQ01000132 RefSeq:XP_713128.1
RefSeq:XP_713174.1 ProteinModelPortal:Q59U81 STRING:Q59U81
PRIDE:Q59U81 GeneID:3645174 GeneID:3645220 KEGG:cal:CaO19.1871
KEGG:cal:CaO19.9427 KO:K11681 Uniprot:Q59U81
Length = 1641
Score = 222 (83.2 bits), Expect = 8.9e-17, P = 8.9e-17
Identities = 45/88 (51%), Positives = 56/88 (63%)
Query: 105 LHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLS 164
L YQ +G+NWL + N + ILADEMGLGKTIQTI+ L L E H GP L+ P S
Sbjct: 823 LRPYQKQGLNWLASLYNNNTNGILADEMGLGKTIQTISLLAYLACEHHKWGPHLIIVPTS 882
Query: 165 TIINWEREFETWAPDFYVVTYVGDKDCR 192
++NWE EF+ +AP F V+TY G R
Sbjct: 883 VMLNWEMEFKKFAPGFKVLTYYGSPQQR 910
>UNIPROTKB|F1NAD2 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000018 "regulation of
DNA recombination" evidence=IEA] [GO:0000729 "DNA double-strand
break processing" evidence=IEA] [GO:0000792 "heterochromatin"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0035861
"site of double-strand break" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0043596
"nuclear replication fork" evidence=IEA] [GO:0051304 "chromosome
separation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0070933 "histone H4 deacetylation" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0000018 GeneTree:ENSGT00630000089890
GO:GO:0051304 OMA:KNQRGIQ EMBL:AADN02016061 EMBL:AADN02016062
EMBL:AADN02016063 EMBL:AADN02016064 EMBL:AADN02016065
EMBL:AADN02016066 EMBL:AADN02016067 IPI:IPI00583150
Ensembl:ENSGALT00000016936 Uniprot:F1NAD2
Length = 963
Score = 219 (82.2 bits), Expect = 9.1e-17, P = 9.1e-17
Identities = 50/110 (45%), Positives = 68/110 (61%)
Query: 93 KQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGH 152
+QP L+ + ++L YQ G+NWL ++ ILADEMGLGKTIQ I FL +++EG
Sbjct: 422 EQPSVLNQS-LELKPYQKIGLNWLALLHKHGLNGILADEMGLGKTIQAIAFLAHIYQEGD 480
Query: 153 CKGPFLVSAPLSTIINWEREFETWAPDFYVVTY-VGDKDCRIVLRDHDIS 201
+GP L+ P ST+ NW RE W P+ V+ Y VG ++ R LR DIS
Sbjct: 481 -RGPHLIVVPASTLDNWIREVNLWCPELNVLFYYVGSQEDRKHLRA-DIS 528
>UNIPROTKB|Q9NRZ9 [details] [associations]
symbol:HELLS "Lymphoid-specific helicase" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0001655 "urogenital system development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005721
"centromeric heterochromatin" evidence=ISS] [GO:0006346
"methylation-dependent chromatin silencing" evidence=ISS]
[GO:0007275 "multicellular organismal development" evidence=ISS]
[GO:0010216 "maintenance of DNA methylation" evidence=ISS]
[GO:0031508 "centromeric heterochromatin assembly" evidence=ISS]
[GO:0000775 "chromosome, centromeric region" evidence=ISS]
[GO:0046651 "lymphocyte proliferation" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0005634 GO:GO:0051301 GO:GO:0007067 GO:GO:0003677
EMBL:CH471066 GO:GO:0006351 GO:GO:0003682 GO:GO:0001655
GO:GO:0004386 GO:GO:0005721 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031508
GO:GO:0010216 GO:GO:0006346 GO:GO:0046651 EMBL:AF155827
EMBL:AB102717 EMBL:AB102718 EMBL:AB102719 EMBL:AB102720
EMBL:AB102721 EMBL:AB102722 EMBL:AK314485 EMBL:AB113249
EMBL:BX538033 EMBL:AL138759 EMBL:BC015477 EMBL:BC029381
EMBL:BC030963 EMBL:BC031004 EMBL:AY007108 EMBL:AB074174
IPI:IPI00010590 IPI:IPI00807418 IPI:IPI00807455 IPI:IPI00807553
IPI:IPI00807574 IPI:IPI00807597 IPI:IPI00807667 IPI:IPI00807698
IPI:IPI00807726 RefSeq:NP_060533.2 UniGene:Hs.655830
ProteinModelPortal:Q9NRZ9 SMR:Q9NRZ9 IntAct:Q9NRZ9 STRING:Q9NRZ9
PhosphoSite:Q9NRZ9 DMDM:74761670 PaxDb:Q9NRZ9 PRIDE:Q9NRZ9
DNASU:3070 Ensembl:ENST00000348459 Ensembl:ENST00000394036
Ensembl:ENST00000394044 Ensembl:ENST00000394045 GeneID:3070
KEGG:hsa:3070 UCSC:uc001kjs.3 UCSC:uc009xul.3 UCSC:uc009xum.3
CTD:3070 GeneCards:GC10P096305 H-InvDB:HIX0017337 HGNC:HGNC:4861
HPA:CAB004491 MIM:603946 neXtProt:NX_Q9NRZ9 PharmGKB:PA35054
HOVERGEN:HBG060049 OrthoDB:EOG4SN1N4 PhylomeDB:Q9NRZ9 ChiTaRS:HELLS
GenomeRNAi:3070 NextBio:12147 ArrayExpress:Q9NRZ9 Bgee:Q9NRZ9
Genevestigator:Q9NRZ9 GermOnline:ENSG00000119969 Uniprot:Q9NRZ9
Length = 838
Score = 218 (81.8 bits), Expect = 9.5e-17, P = 9.5e-17
Identities = 56/139 (40%), Positives = 76/139 (54%)
Query: 60 ELQEDEDGASGSKPRRYTPPPE--KPTTDLRKKYEKQP-PFLDD---TGMQLHAYQLEGI 113
+LQ+++D S K R + K D +K QP PF TG + YQ+EG+
Sbjct: 172 DLQKNKDSNSIIKDRLSETVRQNTKFFFDPVRKCNGQPVPFQQPKHFTGGVMRWYQVEGM 231
Query: 114 NWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREF 173
WLR W I+ ILADEMGLGKT+Q I + + + G GPFLV PLST+ NW EF
Sbjct: 232 EWLRMLWENGINGILADEMGLGKTVQCIATIALMIQRG-VPGPFLVCGPLSTLPNWMAEF 290
Query: 174 ETWAPDFYVVTYVGDKDCR 192
+ + PD + Y G ++ R
Sbjct: 291 KRFTPDIPTMLYHGTQEER 309
>UNIPROTKB|E2QW28 [details] [associations]
symbol:HELLS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 OMA:ETFYTAI
GeneTree:ENSGT00550000075106 EMBL:AAEX03015428
Ensembl:ENSCAFT00000012889 Uniprot:E2QW28
Length = 839
Score = 218 (81.8 bits), Expect = 9.5e-17, P = 9.5e-17
Identities = 56/139 (40%), Positives = 75/139 (53%)
Query: 60 ELQEDEDGASGSKPR--RYTPPPEKPTTDLRKKYEKQP-PFLDD---TGMQLHAYQLEGI 113
+LQ+++D S K R + K D +K QP PF TG + YQ+EG+
Sbjct: 173 DLQKNKDSNSIIKDRLSQTVRQNTKFFFDPVRKCNGQPVPFQQPKHFTGGVMRWYQVEGM 232
Query: 114 NWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREF 173
WLR W I+ ILADEMGLGKT+Q I + + + G GPFLV PLST+ NW EF
Sbjct: 233 EWLRMLWENGINGILADEMGLGKTVQCIATIALMIQRG-VPGPFLVCGPLSTLPNWMAEF 291
Query: 174 ETWAPDFYVVTYVGDKDCR 192
+ + PD + Y G + R
Sbjct: 292 QRFTPDIPTMLYHGTQQER 310
>ZFIN|ZDB-GENE-030131-9923 [details] [associations]
symbol:hells "helicase, lymphoid-specific"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000775
"chromosome, centromeric region" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0045132 "meiotic chromosome segregation"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR011515 Pfam:PF00176 Pfam:PF00271
Pfam:PF07557 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-030131-9923 GO:GO:0005524 GO:GO:0005634 GO:GO:0000775
GO:GO:0003677 GO:GO:0004386 GO:GO:0045132 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 CTD:3070 HOVERGEN:HBG060049
EMBL:AY612850 IPI:IPI00817585 RefSeq:NP_001032178.1
UniGene:Dr.75180 ProteinModelPortal:Q3BDS6 STRING:Q3BDS6
GeneID:553328 KEGG:dre:553328 InParanoid:Q3BDS6 NextBio:20880094
ArrayExpress:Q3BDS6 Uniprot:Q3BDS6
Length = 853
Score = 218 (81.8 bits), Expect = 9.8e-17, P = 9.8e-17
Identities = 52/116 (44%), Positives = 69/116 (59%)
Query: 80 PEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQ 139
PE+ T + + +QP TG + YQ+EGI WLR W I+ ILADEMGLGKTIQ
Sbjct: 211 PER-TVNGQPVPAQQPQLF--TGGVMRWYQVEGIEWLRMLWENGINGILADEMGLGKTIQ 267
Query: 140 TITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVL 195
I + ++ E GPFLV APLST+ NW EF+ + P+ V+ Y G + R+ L
Sbjct: 268 CIAHI-AMMVEKKVLGPFLVVAPLSTLPNWISEFKRFTPEVSVLLYHGPQKERLDL 322
>UNIPROTKB|Q9H4L7 [details] [associations]
symbol:SMARCAD1 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A containing
DEAD/H box 1" species:9606 "Homo sapiens" [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0009117 "nucleotide metabolic process" evidence=NAS]
[GO:0003676 "nucleic acid binding" evidence=NAS] [GO:0016363
"nuclear matrix" evidence=NAS] [GO:0051260 "protein
homooligomerization" evidence=NAS] [GO:0000018 "regulation of DNA
recombination" evidence=IEP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0016568 "chromatin
modification" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003677 "DNA binding" evidence=IDA] [GO:0000729
"DNA double-strand break processing" evidence=IMP] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IMP] [GO:0035861
"site of double-strand break" evidence=IDA] [GO:0043596 "nuclear
replication fork" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=NAS] [GO:0051304 "chromosome separation" evidence=IMP]
[GO:0070932 "histone H3 deacetylation" evidence=IMP] [GO:0070933
"histone H4 deacetylation" evidence=IMP] [GO:0000792
"heterochromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR003892 InterPro:IPR009060
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0045893 GO:GO:0003677
GO:GO:0009117 GO:GO:0051260 GO:GO:0043596 GO:GO:0004386
GO:GO:0016363 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043044 SUPFAM:SSF46934 GO:GO:0000792
GO:GO:0070932 GO:GO:0070933 GO:GO:0000729 GO:GO:0000018
HOGENOM:HOG000172362 GO:GO:0035861 KO:K14439 GO:GO:0051304
OMA:KNQRGIQ EMBL:AY008271 EMBL:AB032948 EMBL:AK023990 EMBL:AK027490
EMBL:AK301668 EMBL:AC096746 EMBL:BC017953 EMBL:BC045534
EMBL:AL359929 EMBL:AL512768 IPI:IPI00008422 IPI:IPI00220119
RefSeq:NP_001121901.1 RefSeq:NP_001121902.1 RefSeq:NP_001241878.1
RefSeq:NP_064544.2 UniGene:Hs.410406 ProteinModelPortal:Q9H4L7
SMR:Q9H4L7 STRING:Q9H4L7 PhosphoSite:Q9H4L7 DMDM:306526240
PaxDb:Q9H4L7 PRIDE:Q9H4L7 DNASU:56916 Ensembl:ENST00000354268
Ensembl:ENST00000359052 Ensembl:ENST00000457823
Ensembl:ENST00000509418 GeneID:56916 KEGG:hsa:56916 UCSC:uc003htb.4
UCSC:uc003htc.4 CTD:56916 GeneCards:GC04P095128 H-InvDB:HIX0004380
HGNC:HGNC:18398 HPA:HPA016737 MIM:136000 MIM:612761
neXtProt:NX_Q9H4L7 Orphanet:289465 PharmGKB:PA134954731
HOVERGEN:HBG055804 ChiTaRS:SMARCAD1 GenomeRNAi:56916 NextBio:62407
ArrayExpress:Q9H4L7 Bgee:Q9H4L7 CleanEx:HS_SMARCAD1
Genevestigator:Q9H4L7 GermOnline:ENSG00000163104 Uniprot:Q9H4L7
Length = 1026
Score = 219 (82.2 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 47/104 (45%), Positives = 62/104 (59%)
Query: 93 KQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGH 152
+QP L+ + + L YQ G+NWL ++ ILADEMGLGKTIQ I FL L++EG+
Sbjct: 486 EQPSILNQS-LSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLYQEGN 544
Query: 153 CKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLR 196
GP L+ P STI NW RE W P V+ Y G ++ R +R
Sbjct: 545 -NGPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIR 587
>UNIPROTKB|E2RJ89 [details] [associations]
symbol:SMARCA4 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 KO:K11647
GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
CTD:6597 EMBL:AAEX03012414 RefSeq:XP_867683.1
Ensembl:ENSCAFT00000027907 GeneID:476710 KEGG:cfa:476710
OMA:HKPMESM Uniprot:E2RJ89
Length = 1614
Score = 221 (82.9 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 45/104 (43%), Positives = 63/104 (60%)
Query: 89 KKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLF 148
++ +KQ + + G+ L YQ++G+ WL + N++ ILADEMGLGKTIQTI + L
Sbjct: 740 ERVDKQSALMVN-GV-LKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLM 797
Query: 149 KEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCR 192
+ GPFL+ PLST+ NW EF+ WAP V+Y G R
Sbjct: 798 EHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAAR 841
>FB|FBgn0086613 [details] [associations]
symbol:Ino80 "Ino80" species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0031011 "Ino80 complex" evidence=IDA] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0000975 "regulatory region DNA
binding" evidence=IDA] [GO:0010468 "regulation of gene expression"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IDA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 EMBL:AE014297 GO:GO:0005524
GO:GO:0006355 GO:GO:0006281 GO:GO:0006351 GO:GO:0016887
GO:GO:0006338 GO:GO:0031011 GO:GO:0006310 GO:GO:0005700
GO:GO:0010468 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0003678 GO:GO:0000975 KO:K11665
EMBL:AY069786 RefSeq:NP_732413.1 UniGene:Dm.33518
ProteinModelPortal:Q9VDY1 SMR:Q9VDY1 IntAct:Q9VDY1 STRING:Q9VDY1
PaxDb:Q9VDY1 EnsemblMetazoa:FBtr0083771 GeneID:42314
KEGG:dme:Dmel_CG31212 UCSC:CG31212-RA CTD:54617 FlyBase:FBgn0086613
GeneTree:ENSGT00680000100052 InParanoid:Q9VDY1 OMA:NTMAEVR
OrthoDB:EOG4SQVBH PhylomeDB:Q9VDY1 ChiTaRS:INO80 GenomeRNAi:42314
NextBio:828189 Bgee:Q9VDY1 Uniprot:Q9VDY1
Length = 1638
Score = 221 (82.9 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 55/135 (40%), Positives = 72/135 (53%)
Query: 62 QEDEDGASGSKPRRYTPPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWG 121
+E+E+ A S P P DL QP T L YQ++G+ WL +
Sbjct: 501 KEEEEQAQESV-EDIKPEPRPEMKDL-----PQPKMFKGT---LKGYQIKGMTWLANIYD 551
Query: 122 QNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFY 181
Q I ILADEMGLGKT+Q+I FL + + GPFLV +P ST+ NW++E + PDF
Sbjct: 552 QGISGILADEMGLGKTVQSIAFLCHIAEHYGVWGPFLVISPASTLHNWQQEMSRFVPDFK 611
Query: 182 VVTYVGDKDCRIVLR 196
VV Y G R +LR
Sbjct: 612 VVPYWGSPAERKILR 626
>SGD|S000005831 [details] [associations]
symbol:ISW2 "ATP-dependent DNA translocase involved in
chromatin remodeling" species:4932 "Saccharomyces cerevisiae"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;IDA;IPI] [GO:0006338 "chromatin remodeling"
evidence=IEA;IGI;IMP;IPI] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0060195 "negative
regulation of antisense RNA transcription" evidence=IGI]
[GO:0016584 "nucleosome positioning" evidence=IDA] [GO:0008623
"CHRAC" evidence=ISS;IPI] [GO:0046020 "negative regulation of
transcription from RNA polymerase II promoter by pheromones"
evidence=IMP] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0000183
"chromatin silencing at rDNA" evidence=IMP] [GO:0015616 "DNA
translocase activity" evidence=IDA] [GO:0003697 "single-stranded
DNA binding" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006369
"termination of RNA polymerase II transcription" evidence=IGI]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 SGD:S000005831 GO:GO:0005524 EMBL:BK006948
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338 GO:GO:0003697
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183 GO:GO:0006348
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
GO:GO:0008623 GO:GO:0006369 GO:GO:0046020 GO:GO:0060195
GO:GO:0015616 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
SUPFAM:SSF101224 OrthoDB:EOG48SM27 EMBL:Z75212 PIR:S67208
RefSeq:NP_014948.1 ProteinModelPortal:Q08773 SMR:Q08773
DIP:DIP-6603N IntAct:Q08773 MINT:MINT-469536 STRING:Q08773
PaxDb:Q08773 PeptideAtlas:Q08773 PRIDE:Q08773 EnsemblFungi:YOR304W
GeneID:854480 KEGG:sce:YOR304W CYGD:YOR304w OMA:NEQSALS
NextBio:976792 Genevestigator:Q08773 GermOnline:YOR304W
Uniprot:Q08773
Length = 1120
Score = 219 (82.2 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 47/100 (47%), Positives = 62/100 (62%)
Query: 93 KQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGH 152
+ P F+ +G +L YQ++G+NWL + ILADEMGLGKT+QTI+FL L
Sbjct: 174 ESPSFVK-SG-KLRDYQVQGLNWLISLHENKLSGILADEMGLGKTLQTISFLGYLRYVKQ 231
Query: 153 CKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCR 192
+GPFL+ P ST+ NW REF W P+ V+ GDKD R
Sbjct: 232 IEGPFLIIVPKSTLDNWRREFLKWTPNVNVLVLHGDKDTR 271
>UNIPROTKB|P51532 [details] [associations]
symbol:SMARCA4 "Transcription activator BRG1" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0016514
"SWI/SNF complex" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0071564 "npBAF complex" evidence=ISS;IDA]
[GO:0071565 "nBAF complex" evidence=ISS] [GO:0006338 "chromatin
remodeling" evidence=IC;IDA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IDA] [GO:0000790
"nuclear chromatin" evidence=IDA] [GO:0071778 "WINAC complex"
evidence=IDA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP;IDA] [GO:0030308 "negative regulation
of cell growth" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IGI;IDA]
[GO:0060766 "negative regulation of androgen receptor signaling
pathway" evidence=IMP] [GO:0050681 "androgen receptor binding"
evidence=IPI] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IGI] [GO:0045749 "negative regulation of S phase of
mitotic cell cycle" evidence=TAS] [GO:0070577 "histone
acetyl-lysine binding" evidence=IDA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0002039 "p53 binding" evidence=IPI]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0003713 "transcription
coactivator activity" evidence=IMP;NAS] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=NAS]
[GO:0006337 "nucleosome disassembly" evidence=IDA] [GO:0043923
"positive regulation by host of viral transcription" evidence=IMP]
[GO:0030957 "Tat protein binding" evidence=IPI] [GO:0003407 "neural
retina development" evidence=IEP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IMP] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 GO:GO:0005524 GO:GO:0003714 GO:GO:0007399
GO:GO:0051091 GO:GO:0030308 GO:GO:0003677 GO:GO:0006338
GO:GO:0000122 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
GO:GO:0003407 GO:GO:0071565 GO:GO:0004386 EMBL:CH471106
GO:GO:0001105 GO:GO:0045749 Orphanet:1465 GO:GO:0006337
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 GO:GO:0070577
InterPro:IPR018359 GO:GO:0071778 KO:K11647 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 EMBL:AC011442 GO:GO:0008094 GO:GO:0060766
GO:GO:0043923 EMBL:AC011485 HOGENOM:HOG000172363 HOVERGEN:HBG056636
CTD:6597 EMBL:U29175 EMBL:D26156 EMBL:AF254822 EMBL:EU430756
EMBL:EU430757 EMBL:EU430758 EMBL:EU430759 EMBL:AC006127
IPI:IPI00293426 IPI:IPI00900285 IPI:IPI00900328 IPI:IPI00900338
IPI:IPI01016040 PIR:S45252 RefSeq:NP_001122316.1
RefSeq:NP_001122317.1 RefSeq:NP_001122318.1 RefSeq:NP_001122319.1
RefSeq:NP_001122320.1 RefSeq:NP_003063.2 UniGene:Hs.327527 PDB:2GRC
PDB:2H60 PDB:3UVD PDBsum:2GRC PDBsum:2H60 PDBsum:3UVD
ProteinModelPortal:P51532 SMR:P51532 DIP:DIP-24249N IntAct:P51532
MINT:MINT-204078 STRING:P51532 PhosphoSite:P51532 DMDM:116242792
PaxDb:P51532 PRIDE:P51532 Ensembl:ENST00000344626
Ensembl:ENST00000413806 Ensembl:ENST00000429416
Ensembl:ENST00000444061 Ensembl:ENST00000450717
Ensembl:ENST00000541122 GeneID:6597 KEGG:hsa:6597 UCSC:uc002mqf.4
GeneCards:GC19P011071 HGNC:HGNC:11100 HPA:CAB004208 MIM:603254
MIM:613325 MIM:614609 neXtProt:NX_P51532 Orphanet:231108
PharmGKB:PA35950 ChiTaRS:SMARCA4 EvolutionaryTrace:P51532
GenomeRNAi:6597 NextBio:25661 ArrayExpress:P51532 Bgee:P51532
CleanEx:HS_SMARCA4 Genevestigator:P51532 GermOnline:ENSG00000127616
Uniprot:P51532
Length = 1647
Score = 221 (82.9 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 45/104 (43%), Positives = 63/104 (60%)
Query: 89 KKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLF 148
++ +KQ + + G+ L YQ++G+ WL + N++ ILADEMGLGKTIQTI + L
Sbjct: 740 ERVDKQSALMVN-GV-LKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLM 797
Query: 149 KEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCR 192
+ GPFL+ PLST+ NW EF+ WAP V+Y G R
Sbjct: 798 EHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAAR 841
>UNIPROTKB|Q9HBD4 [details] [associations]
symbol:SMARCA4 "SMARCA4 isoform 2" species:9606 "Homo
sapiens" [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000792 "heterochromatin" evidence=IEA] [GO:0000902 "cell
morphogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0001832 "blastocyst
growth" evidence=IEA] [GO:0001835 "blastocyst hatching"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0005719 "nuclear
euchromatin" evidence=IEA] [GO:0005726 "perichromatin fibrils"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=IEA] [GO:0007403 "glial cell fate determination"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0010424 "DNA methylation on cytosine within a CG
sequence" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0030198 "extracellular matrix organization"
evidence=IEA] [GO:0030216 "keratinocyte differentiation"
evidence=IEA] [GO:0030900 "forebrain development" evidence=IEA]
[GO:0030902 "hindbrain development" evidence=IEA] [GO:0035116
"embryonic hindlimb morphogenesis" evidence=IEA] [GO:0035887
"aortic smooth muscle cell differentiation" evidence=IEA]
[GO:0043388 "positive regulation of DNA binding" evidence=IEA]
[GO:0043966 "histone H3 acetylation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
evidence=IEA] [GO:0048730 "epidermis morphogenesis" evidence=IEA]
[GO:0060318 "definitive erythrocyte differentiation" evidence=IEA]
[GO:0060347 "heart trabecula formation" evidence=IEA] [GO:0071564
"npBAF complex" evidence=IEA] [GO:0071565 "nBAF complex"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
GO:GO:0001889 GO:GO:0003682 GO:GO:0006338 GO:GO:0000122
GO:GO:0071564 GO:GO:0071565 GO:GO:0000902 GO:GO:0004386
GO:GO:0001570 GO:GO:0035116 GO:GO:0005719 GO:GO:0030902
EMBL:CH471106 GO:GO:0048730 GO:GO:0000977 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0019827 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792
GO:GO:0060347 GO:GO:0043966 GO:GO:0043388 KO:K11647
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 EMBL:AC011442
GO:GO:0001835 GO:GO:0007403 GO:GO:0006346 GO:GO:0010424
GO:GO:0060318 GO:GO:0048562 GO:GO:0001832 EMBL:AC011485
GO:GO:0005726 HOGENOM:HOG000172363 HOVERGEN:HBG056636 GO:GO:0035887
CTD:6597 EMBL:AF254822 EMBL:AC006127 UniGene:Hs.327527 GeneID:6597
KEGG:hsa:6597 HGNC:HGNC:11100 PharmGKB:PA35950 ChiTaRS:SMARCA4
GenomeRNAi:6597 NextBio:25661 IPI:IPI00900269 RefSeq:NP_001122321.1
SMR:Q9HBD4 STRING:Q9HBD4 Ensembl:ENST00000358026 UCSC:uc010dxo.3
Uniprot:Q9HBD4
Length = 1679
Score = 221 (82.9 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 45/104 (43%), Positives = 63/104 (60%)
Query: 89 KKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLF 148
++ +KQ + + G+ L YQ++G+ WL + N++ ILADEMGLGKTIQTI + L
Sbjct: 740 ERVDKQSALMVN-GV-LKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLM 797
Query: 149 KEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCR 192
+ GPFL+ PLST+ NW EF+ WAP V+Y G R
Sbjct: 798 EHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAAR 841
>MGI|MGI:106209 [details] [associations]
symbol:Hells "helicase, lymphoid specific" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000775 "chromosome, centromeric region" evidence=IDA]
[GO:0001655 "urogenital system development" evidence=IMP]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005721 "centromeric heterochromatin"
evidence=IDA] [GO:0006306 "DNA methylation" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IMP] [GO:0006346
"methylation-dependent chromatin silencing" evidence=IMP]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IMP] [GO:0010216 "maintenance of DNA
methylation" evidence=IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0030098 "lymphocyte differentiation"
evidence=TAS] [GO:0031508 "centromeric heterochromatin assembly"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 MGI:MGI:106209 GO:GO:0005524
GO:GO:0005634 GO:GO:0043066 GO:GO:0051301 GO:GO:0007067
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GO:GO:0001655
GO:GO:0004386 GO:GO:0005721 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031508
GO:GO:0010216 HOGENOM:HOG000172362 OMA:ETFYTAI GO:GO:0006346
GO:GO:0030098 GO:GO:0046651 CTD:3070 HOVERGEN:HBG060049
OrthoDB:EOG4SN1N4 EMBL:U25691 EMBL:AF155210 EMBL:AK013266
EMBL:AK147126 EMBL:BC020056 EMBL:BC100394 IPI:IPI00121431
IPI:IPI00808497 PIR:JC4666 RefSeq:NP_032260.2 UniGene:Mm.392920
UniGene:Mm.486446 UniGene:Mm.57223 ProteinModelPortal:Q60848
SMR:Q60848 DIP:DIP-43735N IntAct:Q60848 MINT:MINT-2521001
STRING:Q60848 PhosphoSite:Q60848 PaxDb:Q60848 PRIDE:Q60848
DNASU:15201 Ensembl:ENSMUST00000025965 GeneID:15201 KEGG:mmu:15201
UCSC:uc008hjt.1 GeneTree:ENSGT00550000075106 InParanoid:Q60848
NextBio:287739 Bgee:Q60848 CleanEx:MM_HELLS Genevestigator:Q60848
GermOnline:ENSMUSG00000025001 Uniprot:Q60848
Length = 821
Score = 217 (81.4 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 54/139 (38%), Positives = 76/139 (54%)
Query: 60 ELQEDEDGASGSKPR--RYTPPPEKPTTDLRKKYEKQP-PFLDD---TGMQLHAYQLEGI 113
++Q+++D S K R + K D +K QP PF TG + YQ+EG+
Sbjct: 155 DIQKNKDSNSMIKDRLSQTVRQNSKFFFDPVRKCNGQPVPFQQPKHFTGGVMRWYQVEGM 214
Query: 114 NWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREF 173
WLR W I+ ILADEMGLGKT+Q I + + + G GPFLV PLST+ NW EF
Sbjct: 215 EWLRMLWENGINGILADEMGLGKTVQCIATIALMIQRG-VPGPFLVCGPLSTLPNWMAEF 273
Query: 174 ETWAPDFYVVTYVGDKDCR 192
+ + P+ + Y G ++ R
Sbjct: 274 KRFTPEIPTLLYHGTREDR 292
>FB|FBgn0032157 [details] [associations]
symbol:Etl1 "Etl1 homologue" species:7227 "Drosophila
melanogaster" [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISS] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 EMBL:AE014134 GO:GO:0003677
GO:GO:0006281 GO:GO:0016568 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 KO:K14439
GeneTree:ENSGT00630000089890 OMA:KEERYMA EMBL:AY060597
RefSeq:NP_001033889.1 RefSeq:NP_001033890.1 RefSeq:NP_609320.2
UniGene:Dm.3953 ProteinModelPortal:Q9VL72 SMR:Q9VL72 IntAct:Q9VL72
STRING:Q9VL72 PRIDE:Q9VL72 EnsemblMetazoa:FBtr0079901 GeneID:34311
KEGG:dme:Dmel_CG5899 UCSC:CG5899-RA FlyBase:FBgn0032157
InParanoid:Q9VL72 PhylomeDB:Q9VL72 GenomeRNAi:34311 NextBio:787873
Bgee:Q9VL72 Uniprot:Q9VL72
Length = 844
Score = 217 (81.4 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 47/104 (45%), Positives = 61/104 (58%)
Query: 93 KQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGH 152
+QP L +G+QL YQ+ G+NWL Q ++ ILADEMGLGKTIQ I FL L + G
Sbjct: 278 EQPKLLS-SGLQLADYQIIGLNWLTVMHKQEMNGILADEMGLGKTIQVIAFLAYLKENGL 336
Query: 153 CKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLR 196
+ L+ P ST+ NWE E W P+ V Y G +D R +R
Sbjct: 337 SQAAHLIVVPSSTLDNWEAEISRWCPELVVEKYHGSQDERRRMR 380
>POMBASE|SPCC1235.05c [details] [associations]
symbol:fft2 "fun thirty related protein Fft2
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000790
"nuclear chromatin" evidence=NAS] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISM;ISS] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=NAS]
[GO:0051276 "chromosome organization" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 PomBase:SPCC1235.05c GO:GO:0005829
GO:GO:0005524 EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0003677
GO:GO:0006338 GO:GO:0000790 GO:GO:0004003 HSSP:Q97XQ5
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0016585 OrthoDB:EOG4BCHW4 PIR:T40879 RefSeq:NP_587731.1
ProteinModelPortal:O74842 STRING:O74842 EnsemblFungi:SPCC1235.05c.1
GeneID:2539045 KEGG:spo:SPCC1235.05c KO:K14439 NextBio:20800219
Uniprot:O74842
Length = 1284
Score = 219 (82.2 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 49/120 (40%), Positives = 65/120 (54%)
Query: 78 PPPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKT 137
P +D K +QP L + +QL +YQL G+NWL + Q + ILADEMGLGKT
Sbjct: 524 PTEAADNSDFPKFVTEQPKTLA-SDVQLKSYQLVGVNWLHLLYQQKLSGILADEMGLGKT 582
Query: 138 IQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRD 197
Q + F L ++GH GP LV P ST+ NW RE + P V Y G + R +R+
Sbjct: 583 CQVVAFFALLLEQGH-HGPHLVVVPSSTLENWLRELARFCPSLRVEPYYGSQQERANIRE 641
>UNIPROTKB|H0YMN5 [details] [associations]
symbol:INO80 "DNA helicase INO80" species:9606 "Homo
sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016817 "hydrolase activity, acting on
acid anhydrides" evidence=IEA] InterPro:IPR000330
InterPro:IPR020838 Pfam:PF00176 Pfam:PF13892 PROSITE:PS51413
GO:GO:0005524 GO:GO:0003677 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AC020661 GO:GO:0016817 ChiTaRS:INO80
HGNC:HGNC:26956 EMBL:AC021753 ProteinModelPortal:H0YMN5 SMR:H0YMN5
Ensembl:ENST00000558357 Bgee:H0YMN5 Uniprot:H0YMN5
Length = 1104
Score = 218 (81.8 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 44/93 (47%), Positives = 61/93 (65%)
Query: 104 QLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPL 163
+L YQL+G+NWL + Q I+ ILADEMGLGKT+Q+I L L + + GPFL+ +P
Sbjct: 517 KLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLIISPA 576
Query: 164 STIINWEREFETWAPDFYVVTYVGDKDCRIVLR 196
ST+ NW +EF + P F V+ Y G+ R V+R
Sbjct: 577 STLNNWHQEFTRFVPKFKVLPYWGNPHDRKVIR 609
>UNIPROTKB|F1Q2U2 [details] [associations]
symbol:CHD1L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589
PROSITE:PS51154 GO:GO:0008026 OMA:TCQTIAL
GeneTree:ENSGT00670000098110 EMBL:AAEX03011032
Ensembl:ENSCAFT00000017488 Uniprot:F1Q2U2
Length = 898
Score = 216 (81.1 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 47/103 (45%), Positives = 60/103 (58%)
Query: 101 TGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVS 160
TG++L +YQLEG+NWL + IL DEMGLGKT QTI L + +GPFL+
Sbjct: 44 TGIRLRSYQLEGVNWLARCFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLNDEGPFLIL 103
Query: 161 APLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWE 203
PLS + NW E E +AP V Y GDK+ R L+ D+ E
Sbjct: 104 CPLSVLSNWTEEMERFAPGLSCVMYAGDKEERARLQQ-DLKQE 145
>ZFIN|ZDB-GENE-041014-72 [details] [associations]
symbol:ino80 "INO80 homolog (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
ZFIN:ZDB-GENE-041014-72 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:BX897725
HOGENOM:HOG000231795 HOVERGEN:HBG057875 OMA:KVIRKFW IPI:IPI00516098
UniGene:Dr.84310 ProteinModelPortal:Q5RGG8 STRING:Q5RGG8
InParanoid:Q5RGG8 Uniprot:Q5RGG8
Length = 1582
Score = 219 (82.2 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 44/93 (47%), Positives = 61/93 (65%)
Query: 104 QLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPL 163
+L YQL+G+NWL + Q I+ ILADEMGLGKT+Q+I L L + + GPFL+ +P
Sbjct: 518 KLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLIISPA 577
Query: 164 STIINWEREFETWAPDFYVVTYVGDKDCRIVLR 196
ST+ NW +EF + P F V+ Y G+ R V+R
Sbjct: 578 STLNNWHQEFSRFVPKFKVLPYWGNPHDRKVIR 610
>UNIPROTKB|Q9ULG1 [details] [associations]
symbol:INO80 "DNA helicase INO80" species:9606 "Homo
sapiens" [GO:0003779 "actin binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0003678 "DNA helicase
activity" evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0031011 "Ino80 complex" evidence=IDA] [GO:0034644 "cellular
response to UV" evidence=IMP] [GO:0000724 "double-strand break
repair via homologous recombination" evidence=IMP] [GO:0070914
"UV-damage excision repair" evidence=IMP] [GO:0071479 "cellular
response to ionizing radiation" evidence=IMP] [GO:0006302
"double-strand break repair" evidence=IMP] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0030307 "positive regulation of cell growth"
evidence=IMP] [GO:2000045 "regulation of G1/S transition of mitotic
cell cycle" evidence=IMP] [GO:0010571 "positive regulation of DNA
replication involved in S phase" evidence=IMP] [GO:0043014
"alpha-tubulin binding" evidence=IMP] [GO:0051225 "spindle
assembly" evidence=IMP] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0032508 "DNA duplex unwinding" evidence=IDA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF13892 PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
GO:GO:0005524 GO:GO:0030307 GO:GO:0051301 GO:GO:0051225
GO:GO:0003677 GO:GO:0045944 GO:GO:0016887 GO:GO:0006338
GO:GO:0000070 GO:GO:0031011 GO:GO:0000724 GO:GO:0034644
GO:GO:0005874 GO:GO:0071479 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043014
GO:GO:0003678 GO:GO:0070914 GO:GO:2000045 EMBL:CH471125
GO:GO:0010571 KO:K11665 CTD:54617 ChiTaRS:INO80 EMBL:AB033085
EMBL:BC146785 EMBL:AL137280 IPI:IPI00008091 PIR:T46350
RefSeq:NP_060023.1 UniGene:Hs.292949 ProteinModelPortal:Q9ULG1
SMR:Q9ULG1 DIP:DIP-34296N IntAct:Q9ULG1 STRING:Q9ULG1
PhosphoSite:Q9ULG1 DMDM:114149322 PaxDb:Q9ULG1 PRIDE:Q9ULG1
Ensembl:ENST00000361937 Ensembl:ENST00000401393 GeneID:54617
KEGG:hsa:54617 UCSC:uc001zni.3 GeneCards:GC15M041271
HGNC:HGNC:26956 MIM:610169 neXtProt:NX_Q9ULG1 PharmGKB:PA162392040
HOGENOM:HOG000231795 HOVERGEN:HBG057875 InParanoid:Q9ULG1
OMA:KVIRKFW OrthoDB:EOG4ZKJKF GenomeRNAi:54617 NextBio:57137
ArrayExpress:Q9ULG1 Bgee:Q9ULG1 CleanEx:HS_INO80
Genevestigator:Q9ULG1 GermOnline:ENSG00000128908 Uniprot:Q9ULG1
Length = 1556
Score = 218 (81.8 bits), Expect = 2.2e-16, P = 2.2e-16
Identities = 44/93 (47%), Positives = 61/93 (65%)
Query: 104 QLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPL 163
+L YQL+G+NWL + Q I+ ILADEMGLGKT+Q+I L L + + GPFL+ +P
Sbjct: 517 KLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLIISPA 576
Query: 164 STIINWEREFETWAPDFYVVTYVGDKDCRIVLR 196
ST+ NW +EF + P F V+ Y G+ R V+R
Sbjct: 577 STLNNWHQEFTRFVPKFKVLPYWGNPHDRKVIR 609
>MGI|MGI:1915392 [details] [associations]
symbol:Ino80 "INO80 homolog (S. cerevisiae)" species:10090
"Mus musculus" [GO:0000070 "mitotic sister chromatid segregation"
evidence=ISO] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003678
"DNA helicase activity" evidence=ISO] [GO:0003779 "actin binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005874 "microtubule" evidence=IEA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=ISO] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0010571 "positive regulation of DNA replication involved in S
phase" evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0030307 "positive regulation of cell growth" evidence=ISO]
[GO:0031011 "Ino80 complex" evidence=ISO] [GO:0032508 "DNA duplex
unwinding" evidence=ISO] [GO:0034644 "cellular response to UV"
evidence=ISO] [GO:0043014 "alpha-tubulin binding" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0051225 "spindle
assembly" evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
[GO:0070914 "UV-damage excision repair" evidence=ISO] [GO:0071479
"cellular response to ionizing radiation" evidence=ISO] [GO:2000045
"regulation of G1/S transition of mitotic cell cycle" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 MGI:MGI:1915392 GO:GO:0005524
GO:GO:0005634 GO:GO:0030307 GO:GO:0051301 GO:GO:0051225
GO:GO:0003677 GO:GO:0045944 GO:GO:0016887 GO:GO:0006338
GO:GO:0000070 GO:GO:0031011 GO:GO:0000724 GO:GO:0034644
GO:GO:0005874 GO:GO:0071479 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0070914 GO:GO:2000045 GO:GO:0010571 EMBL:AL844862 KO:K11665
CTD:54617 GeneTree:ENSGT00680000100052 HOGENOM:HOG000231795
HOVERGEN:HBG057875 OMA:KVIRKFW OrthoDB:EOG4ZKJKF EMBL:AK040612
EMBL:AK129317 EMBL:BC059235 IPI:IPI00378561 IPI:IPI00785415
RefSeq:NP_080850.2 UniGene:Mm.330496 ProteinModelPortal:Q6ZPV2
SMR:Q6ZPV2 IntAct:Q6ZPV2 STRING:Q6ZPV2 PhosphoSite:Q6ZPV2
PaxDb:Q6ZPV2 PRIDE:Q6ZPV2 Ensembl:ENSMUST00000049920
Ensembl:ENSMUST00000110808 GeneID:68142 KEGG:mmu:68142
InParanoid:Q6ZPV2 NextBio:326516 Bgee:Q6ZPV2 Genevestigator:Q6ZPV2
GermOnline:ENSMUSG00000034154 Uniprot:Q6ZPV2
Length = 1559
Score = 218 (81.8 bits), Expect = 2.2e-16, P = 2.2e-16
Identities = 44/93 (47%), Positives = 61/93 (65%)
Query: 104 QLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPL 163
+L YQL+G+NWL + Q I+ ILADEMGLGKT+Q+I L L + + GPFL+ +P
Sbjct: 519 KLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLIISPA 578
Query: 164 STIINWEREFETWAPDFYVVTYVGDKDCRIVLR 196
ST+ NW +EF + P F V+ Y G+ R V+R
Sbjct: 579 STLNNWHQEFTRFVPKFKVLPYWGNPHDRKVIR 611
>UNIPROTKB|F1PKX5 [details] [associations]
symbol:INO80 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000045 "regulation of G1/S transition of
mitotic cell cycle" evidence=IEA] [GO:0071479 "cellular response to
ionizing radiation" evidence=IEA] [GO:0070914 "UV-damage excision
repair" evidence=IEA] [GO:0051225 "spindle assembly" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043014 "alpha-tubulin
binding" evidence=IEA] [GO:0034644 "cellular response to UV"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0030307
"positive regulation of cell growth" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0010571 "positive regulation of
DNA replication involved in S phase" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0003678 "DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0030307
GO:GO:0051225 GO:GO:0003677 GO:GO:0045944 GO:GO:0016887
GO:GO:0006338 GO:GO:0000070 GO:GO:0031011 GO:GO:0000724
GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914 GO:GO:2000045
GO:GO:0010571 KO:K11665 CTD:54617 GeneTree:ENSGT00680000100052
OMA:KVIRKFW EMBL:AAEX03016071 RefSeq:XP_849183.1
Ensembl:ENSCAFT00000015097 GeneID:478262 KEGG:cfa:478262
Uniprot:F1PKX5
Length = 1560
Score = 218 (81.8 bits), Expect = 2.2e-16, P = 2.2e-16
Identities = 44/93 (47%), Positives = 61/93 (65%)
Query: 104 QLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPL 163
+L YQL+G+NWL + Q I+ ILADEMGLGKT+Q+I L L + + GPFL+ +P
Sbjct: 520 KLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLIISPA 579
Query: 164 STIINWEREFETWAPDFYVVTYVGDKDCRIVLR 196
ST+ NW +EF + P F V+ Y G+ R V+R
Sbjct: 580 STLNNWHQEFTRFVPKFKVLPYWGNPHDRKVIR 612
>UNIPROTKB|F1NYY9 [details] [associations]
symbol:INO80 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0010571 "positive
regulation of DNA replication involved in S phase" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0030307 "positive
regulation of cell growth" evidence=IEA] [GO:0031011 "Ino80
complex" evidence=IEA] [GO:0034644 "cellular response to UV"
evidence=IEA] [GO:0043014 "alpha-tubulin binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051225 "spindle
assembly" evidence=IEA] [GO:0070914 "UV-damage excision repair"
evidence=IEA] [GO:0071479 "cellular response to ionizing radiation"
evidence=IEA] [GO:2000045 "regulation of G1/S transition of mitotic
cell cycle" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003678 "DNA helicase activity"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490 GO:GO:0005524
GO:GO:0030307 GO:GO:0051225 GO:GO:0003677 GO:GO:0045944
GO:GO:0016887 GO:GO:0006338 GO:GO:0000070 GO:GO:0031011
GO:GO:0000724 GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914
GO:GO:2000045 GO:GO:0010571 GeneTree:ENSGT00680000100052
OMA:KVIRKFW EMBL:AADN02033529 EMBL:AADN02033530 IPI:IPI00604387
Ensembl:ENSGALT00000013933 Uniprot:F1NYY9
Length = 1564
Score = 218 (81.8 bits), Expect = 2.2e-16, P = 2.2e-16
Identities = 44/93 (47%), Positives = 61/93 (65%)
Query: 104 QLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPL 163
+L YQL+G+NWL + Q I+ ILADEMGLGKT+Q+I L L + + GPFL+ +P
Sbjct: 522 KLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLIISPA 581
Query: 164 STIINWEREFETWAPDFYVVTYVGDKDCRIVLR 196
ST+ NW +EF + P F V+ Y G+ R V+R
Sbjct: 582 STLNNWHQEFARFVPKFKVLPYWGNPHDRKVIR 614
>UNIPROTKB|E1BAN8 [details] [associations]
symbol:INO80 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000045 "regulation of G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0071479 "cellular response to ionizing
radiation" evidence=IEA] [GO:0070914 "UV-damage excision repair"
evidence=IEA] [GO:0051225 "spindle assembly" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043014 "alpha-tubulin
binding" evidence=IEA] [GO:0034644 "cellular response to UV"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0030307
"positive regulation of cell growth" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0010571 "positive regulation of
DNA replication involved in S phase" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0003678 "DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0030307
GO:GO:0051225 GO:GO:0003677 GO:GO:0045944 GO:GO:0016887
GO:GO:0006338 GO:GO:0000070 GO:GO:0031011 GO:GO:0000724
GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914 GO:GO:2000045
GO:GO:0010571 KO:K11665 CTD:54617 GeneTree:ENSGT00680000100052
OMA:KVIRKFW EMBL:DAAA02028556 EMBL:DAAA02028557 IPI:IPI00685860
RefSeq:NP_001192313.1 UniGene:Bt.55708 Ensembl:ENSBTAT00000013708
GeneID:505992 KEGG:bta:505992 NextBio:20867400 Uniprot:E1BAN8
Length = 1566
Score = 218 (81.8 bits), Expect = 2.2e-16, P = 2.2e-16
Identities = 44/93 (47%), Positives = 61/93 (65%)
Query: 104 QLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPL 163
+L YQL+G+NWL + Q I+ ILADEMGLGKT+Q+I L L + + GPFL+ +P
Sbjct: 526 KLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLIISPA 585
Query: 164 STIINWEREFETWAPDFYVVTYVGDKDCRIVLR 196
ST+ NW +EF + P F V+ Y G+ R V+R
Sbjct: 586 STLNNWHQEFTRFVPKFKVLPYWGNPHDRKVIR 618
>ASPGD|ASPL0000047400 [details] [associations]
symbol:AN2285 species:162425 "Emericella nidulans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0042766 "nucleosome
mobilization" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0043486 "histone exchange" evidence=IEA] [GO:0006348 "chromatin
silencing at telomere" evidence=IEA] [GO:0006366 "transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0016584
"nucleosome positioning" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0043618 "regulation of transcription from RNA
polymerase II promoter in response to stress" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 EMBL:BN001307 GO:GO:0006281
GO:GO:0006351 GO:GO:0016568 GO:GO:0004386 EMBL:AACD01000038
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K11665 RefSeq:XP_659889.1 ProteinModelPortal:Q5BAZ5
STRING:Q5BAZ5 EnsemblFungi:CADANIAT00008977 GeneID:2874790
KEGG:ani:AN2285.2 HOGENOM:HOG000048482 OMA:LYFQMTR
OrthoDB:EOG41G6C8 Uniprot:Q5BAZ5
Length = 1612
Score = 209 (78.6 bits), Expect = 2.7e-16, Sum P(2) = 2.7e-16
Identities = 44/93 (47%), Positives = 62/93 (66%)
Query: 104 QLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPL 163
+L YQL+G+NWL + Q I+ ILADEMGLGKTIQ+I+ + L + + GPFLV AP
Sbjct: 797 KLKEYQLKGLNWLVNLYEQGINGILADEMGLGKTIQSISVMAYLAEVHNIWGPFLVIAPA 856
Query: 164 STIINWEREFETWAPDFYVVTYVGDKDCRIVLR 196
ST+ NW++E + P+ V+ Y G+ R +LR
Sbjct: 857 STLHNWQQEITKFVPNIKVLPYWGNAKDRKILR 889
Score = 37 (18.1 bits), Expect = 2.7e-16, Sum P(2) = 2.7e-16
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 71 SKPRRYTPPPEKPTTDLRKKYEKQPP 96
+KPR Y P E Y++QPP
Sbjct: 25 NKPRHYYPNSEH--------YQQQPP 42
Score = 35 (17.4 bits), Expect = 4.3e-16, Sum P(2) = 4.3e-16
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 79 PPEKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGIN 114
P E P + KK K + T + + Y+ +G N
Sbjct: 529 PREDPRKESLKKDAKGGRSKEATPVPVSTYESKGYN 564
>SGD|S000003118 [details] [associations]
symbol:INO80 "ATPase and nucleosome spacing factor"
species:4932 "Saccharomyces cerevisiae" [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA;IMP;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0042766 "nucleosome mobilization" evidence=IMP] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0043486 "histone exchange"
evidence=IDA] [GO:0043140 "ATP-dependent 3'-5' DNA helicase
activity" evidence=IDA] [GO:0016817 "hydrolase activity, acting on
acid anhydrides" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IMP;IDA] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0043618 "regulation of transcription from RNA polymerase II
promoter in response to stress" evidence=IMP] [GO:0016584
"nucleosome positioning" evidence=IDA] [GO:0031011 "Ino80 complex"
evidence=IDA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490 SGD:S000003118
GO:GO:0005524 EMBL:BK006941 GO:GO:0003677 GO:GO:0006281
GO:GO:0045944 GO:GO:0016887 GO:GO:0006366 GO:GO:0031011
GO:GO:0006348 GO:GO:0004386 GO:GO:0043486 GO:GO:0042766 EMBL:Z48618
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:X99960 GO:GO:0016584 GO:GO:0043618 KO:K11665
GeneTree:ENSGT00680000100052 HOGENOM:HOG000048482 OrthoDB:EOG41G6C8
EMBL:Z72672 PIR:S60416 RefSeq:NP_011365.1 ProteinModelPortal:P53115
SMR:P53115 DIP:DIP-1386N IntAct:P53115 MINT:MINT-388693
STRING:P53115 PaxDb:P53115 PeptideAtlas:P53115 EnsemblFungi:YGL150C
GeneID:852728 KEGG:sce:YGL150C CYGD:YGL150c OMA:DEFSDWF
NextBio:972117 Genevestigator:P53115 GermOnline:YGL150C
Uniprot:P53115
Length = 1489
Score = 217 (81.4 bits), Expect = 2.7e-16, P = 2.7e-16
Identities = 51/116 (43%), Positives = 70/116 (60%)
Query: 81 EKPTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQT 140
+ PT+ L + +QP L T L YQL+G+NWL + Q I+ ILADEMGLGKT+Q+
Sbjct: 686 QNPTS-LGEITIEQPKILACT---LKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQS 741
Query: 141 ITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLR 196
I+ L L + + GPFLV P ST+ NW E + P F ++ Y G+ + R VLR
Sbjct: 742 ISVLAHLAENHNIWGPFLVVTPASTLHNWVNEISKFLPQFKILPYWGNANDRKVLR 797
>SGD|S000000449 [details] [associations]
symbol:ISW1 "ATPase subunit of imitation-switch (ISWI) class
chromatin remodelers" species:4932 "Saccharomyces cerevisiae"
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0006369
"termination of RNA polymerase II transcription" evidence=IGI]
[GO:0034401 "regulation of transcription by chromatin organization"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0031491 "nucleosome binding" evidence=IEA;IDA] [GO:0003677 "DNA
binding" evidence=IEA;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0030874 "nucleolar chromatin" evidence=IDA] [GO:0000182 "rDNA
binding" evidence=IDA] [GO:0006363 "termination of RNA polymerase I
transcription" evidence=IGI] [GO:0070870 "heterochromatin
maintenance involved in chromatin silencing" evidence=IGI;IMP]
[GO:0016587 "Isw1 complex" evidence=IPI] [GO:0006354 "DNA-dependent
transcription, elongation" evidence=IMP;IDA] [GO:0006338 "chromatin
remodeling" evidence=IEA;IGI;IMP;IPI] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA] [GO:0001178 "regulation of transcriptional start site
selection at RNA polymerase II promoter" evidence=IGI] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016584 "nucleosome positioning"
evidence=IGI;IMP] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 SGD:S000000449 GO:GO:0005524 GO:GO:0006200
GO:GO:0045944 EMBL:BK006936 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0006338 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386
GO:GO:0034401 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
GO:GO:0006363 GO:GO:0006354 GO:GO:0006369
GeneTree:ENSGT00670000098110 GO:GO:0030874 GO:GO:0000182
GO:GO:0001178 GO:GO:0070870 GO:GO:0016587 PDB:2Y9Y PDB:2Y9Z
PDBsum:2Y9Y PDBsum:2Y9Z HOGENOM:HOG000192862 SUPFAM:SSF101224
EMBL:Z36114 PIR:S46122 RefSeq:NP_009804.1 ProteinModelPortal:P38144
SMR:P38144 DIP:DIP-6601N IntAct:P38144 MINT:MINT-614918
STRING:P38144 PaxDb:P38144 PeptideAtlas:P38144 EnsemblFungi:YBR245C
GeneID:852547 KEGG:sce:YBR245C CYGD:YBR245c OMA:LEMITHG
OrthoDB:EOG48SM27 EvolutionaryTrace:P38144 NextBio:971628
Genevestigator:P38144 GermOnline:YBR245C Uniprot:P38144
Length = 1129
Score = 215 (80.7 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 49/107 (45%), Positives = 63/107 (58%)
Query: 90 KYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFL-YSLF 148
++ + P +++ QL YQ++G+NWL I ILADEMGLGKT+QTI+FL Y +
Sbjct: 184 QFRESPAYVNG---QLRPYQIQGVNWLVSLHKNKIAGILADEMGLGKTLQTISFLGYLRY 240
Query: 149 KEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVL 195
E GPFLV AP ST+ NW RE W PD GDK+ R L
Sbjct: 241 IE-KIPGPFLVIAPKSTLNNWLREINRWTPDVNAFILQGDKEERAEL 286
>ZFIN|ZDB-GENE-030131-5964 [details] [associations]
symbol:smarca2 "SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, subfamily a,
member 2" species:7955 "Danio rerio" [GO:0016817 "hydrolase
activity, acting on acid anhydrides" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 ZFIN:ZDB-GENE-030131-5964 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 KO:K11647
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 CTD:6595
HOVERGEN:HBG056636 EMBL:BC060676 IPI:IPI00483012 RefSeq:NP_997881.1
UniGene:Dr.93531 ProteinModelPortal:Q6P9P2 SMR:Q6P9P2 STRING:Q6P9P2
GeneID:334032 KEGG:dre:334032 InParanoid:Q6P9P2 NextBio:20810237
ArrayExpress:Q6P9P2 Uniprot:Q6P9P2
Length = 1568
Score = 210 (79.0 bits), Expect = 3.2e-16, Sum P(2) = 3.2e-16
Identities = 43/104 (41%), Positives = 61/104 (58%)
Query: 89 KKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLF 148
++ +KQ FL + G L YQ++G+ W+ + N++ ILADEMGLGKTIQTI + L
Sbjct: 712 ERVDKQSTFLIN-GT-LKQYQIQGLEWMVSLYNNNLNGILADEMGLGKTIQTIGLITYLM 769
Query: 149 KEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCR 192
+ GP+L+ PLST+ NW E + WAP + Y G R
Sbjct: 770 ELKRLNGPYLIIVPLSTLSNWVYELDKWAPSIVKIAYKGTPSMR 813
Score = 35 (17.4 bits), Expect = 3.2e-16, Sum P(2) = 3.2e-16
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 69 SGSKPRRYTPPPEKPTTDLRKKYEKQPP 96
S + P T P+T L + + QPP
Sbjct: 285 SPAPPLAPTGTQPVPSTSLTSQPQPQPP 312
>UNIPROTKB|Q5FWR0 [details] [associations]
symbol:smarcad1 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A containing
DEAD/H box 1" species:8364 "Xenopus (Silurana) tropicalis"
[GO:0000729 "DNA double-strand break processing" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043044 SUPFAM:SSF46934
GO:GO:0000729 HOGENOM:HOG000172362 GO:GO:0035861 KO:K14439
HOVERGEN:HBG055804 OrthoDB:EOG4RV2QW EMBL:AAMC01061573
EMBL:AAMC01061574 EMBL:AAMC01061575 EMBL:BC089242
RefSeq:NP_001015697.1 UniGene:Str.34312 ProteinModelPortal:Q5FWR0
GeneID:548414 KEGG:xtr:548414 Xenbase:XB-GENE-492700
InParanoid:Q5FWR0 Uniprot:Q5FWR0
Length = 1003
Score = 214 (80.4 bits), Expect = 3.3e-16, P = 3.3e-16
Identities = 47/108 (43%), Positives = 62/108 (57%)
Query: 93 KQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGH 152
+QP + + + L YQ G+NWL ++ ILADEMGLGKT+Q I FL L+ G
Sbjct: 463 EQPSIMSEN-LVLKPYQKIGLNWLALLHKHKVNMILADEMGLGKTVQAIAFLAHLYVTGD 521
Query: 153 CKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDI 200
GP LV P ST+ NW REF W P ++ Y G ++ R LR +DI
Sbjct: 522 -SGPHLVVVPASTMDNWIREFNQWCPSMNILLYYGSQEERKHLR-YDI 567
>TAIR|locus:2054955 [details] [associations]
symbol:ASG3 "ALTERED SEED GERMINATION 3" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP002685
GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 IPI:IPI00520375 RefSeq:NP_973689.2 UniGene:At.47803
ProteinModelPortal:F4IV45 SMR:F4IV45 PRIDE:F4IV45
EnsemblPlants:AT2G44980.2 GeneID:819106 KEGG:ath:AT2G44980
OMA:WALMHFC PhylomeDB:F4IV45 ArrayExpress:F4IV45 Uniprot:F4IV45
Length = 877
Score = 212 (79.7 bits), Expect = 4.5e-16, P = 4.5e-16
Identities = 47/112 (41%), Positives = 67/112 (59%)
Query: 90 KYEKQPPFLDDTGMQ--LHAYQLEGINWL--RYSWGQNIDTILADEMGLGKTIQTITFL- 144
K+ PP + G+ L +Q+EG++WL +Y G N+ + D+MGLGKT+Q I+FL
Sbjct: 34 KFSNTPPDCSEFGVTATLKPHQVEGVSWLIQKYLLGVNV-VLELDQMGLGKTLQAISFLS 92
Query: 145 YSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLR 196
Y F++G GPFLV PLS W E + P+ V+ YVGDK CR+ +R
Sbjct: 93 YLKFRQG-LPGPFLVLCPLSVTDGWVSEINRFTPNLEVLRYVGDKYCRLDMR 143
>MGI|MGI:2444036 [details] [associations]
symbol:Srcap "Snf2-related CREBBP activator protein"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0043234 "protein complex" evidence=ISO] InterPro:IPR000330
Pfam:PF00176 MGI:MGI:2444036 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 GO:GO:0043234 GO:GO:0003677 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 PROSITE:PS51204 GeneTree:ENSGT00530000063427
EMBL:AC136146 EMBL:AC122417 IPI:IPI00988884
ProteinModelPortal:E9Q9V7 SMR:E9Q9V7 Ensembl:ENSMUST00000066582
OMA:VIQDHQA Bgee:E9Q9V7 Uniprot:E9Q9V7
Length = 936
Score = 201 (75.8 bits), Expect = 4.6e-16, Sum P(2) = 4.6e-16
Identities = 40/84 (47%), Positives = 53/84 (63%)
Query: 104 QLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPL 163
QL YQ G++WL + + ++ ILADEMGLGKTIQTI+ L L E GP L+ P
Sbjct: 609 QLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTISLLAHLACEKGNWGPHLIIVPT 668
Query: 164 STIINWEREFETWAPDFYVVTYVG 187
S ++NWE E + W P F ++TY G
Sbjct: 669 SVMLNWEMELKRWCPSFKILTYYG 692
Score = 37 (18.1 bits), Expect = 4.6e-16, Sum P(2) = 4.6e-16
Identities = 12/31 (38%), Positives = 14/31 (45%)
Query: 62 QEDEDGASGSKPRRYTPPPEKPTTDLRKKYE 92
+ + DG SG PP PTT L K E
Sbjct: 552 RSEVDGGSG-------PPTPGPTTTLGPKKE 575
>ZFIN|ZDB-GENE-021125-1 [details] [associations]
symbol:smarca5 "SWI/SNF related, matrix associated,
actin dependent regulator of chromatin, subfamily a, member 5"
species:7955 "Danio rerio" [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 ZFIN:ZDB-GENE-021125-1 GO:GO:0005524
GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0060041
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
GO:GO:0043044 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
SUPFAM:SSF101224 OMA:EDYCHWR HOVERGEN:HBG056329 EMBL:CU550733
IPI:IPI00619566 UniGene:Dr.76168 Ensembl:ENSDART00000123972
ArrayExpress:B8A552 Bgee:B8A552 Uniprot:B8A552
Length = 1035
Score = 212 (79.7 bits), Expect = 5.7e-16, P = 5.7e-16
Identities = 45/114 (39%), Positives = 67/114 (58%)
Query: 85 TDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFL 144
T + +++ P ++ TG +L YQ+ G+NWL + I+ ILADEMGLGKT+QTI+ L
Sbjct: 145 TSVCTRFDDSPSYVK-TG-KLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLL 202
Query: 145 YSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIV-LRD 197
+ + GP +V P ST+ NW EF+ W P V +GD++ R +RD
Sbjct: 203 GYMKHYRNIPGPHMVLVPKSTLYNWMNEFKRWVPSLKAVCLIGDREERTAFIRD 256
>GENEDB_PFALCIPARUM|PFB0730w [details] [associations]
symbol:PFB0730w "DNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0003678 "DNA helicase
activity" evidence=ISS] [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0016514 "SWI/SNF complex" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
GO:GO:0006338 GO:GO:0016514 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 KO:K11647 EMBL:AE001362 OMA:NENMNMS
PIR:F71607 RefSeq:XP_001349665.1 ProteinModelPortal:O96239
EnsemblProtists:PFB0730w:mRNA GeneID:812747 KEGG:pfa:PFB0730w
EuPathDB:PlasmoDB:PF3D7_0216000 Uniprot:O96239
Length = 1997
Score = 214 (80.4 bits), Expect = 7.9e-16, P = 7.9e-16
Identities = 49/103 (47%), Positives = 62/103 (60%)
Query: 89 KKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLF 148
K+ KQP L G +L YQLEG+ WL + N+ ILADEMGLGKTIQTI+ L++
Sbjct: 870 KEKVKQPSIL--IGGELMKYQLEGLEWLVSLYNNNLHGILADEMGLGKTIQTIS-LFAYL 926
Query: 149 KE--GHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDK 189
KE + L+ PLST+ NW EF W P V+TY G+K
Sbjct: 927 KEFKNNINVKNLIIVPLSTLPNWISEFNRWCPSLNVITYRGNK 969
>UNIPROTKB|O96239 [details] [associations]
symbol:PFB0730w "DEAD/DEAH box helicase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003678 "DNA helicase
activity" evidence=ISS] [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0016514 "SWI/SNF complex" evidence=ISS]
[GO:0032508 "DNA duplex unwinding" evidence=ISS] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0006338
GO:GO:0016514 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0003678 KO:K11647 EMBL:AE001362 OMA:NENMNMS PIR:F71607
RefSeq:XP_001349665.1 ProteinModelPortal:O96239
EnsemblProtists:PFB0730w:mRNA GeneID:812747 KEGG:pfa:PFB0730w
EuPathDB:PlasmoDB:PF3D7_0216000 Uniprot:O96239
Length = 1997
Score = 214 (80.4 bits), Expect = 7.9e-16, P = 7.9e-16
Identities = 49/103 (47%), Positives = 62/103 (60%)
Query: 89 KKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLF 148
K+ KQP L G +L YQLEG+ WL + N+ ILADEMGLGKTIQTI+ L++
Sbjct: 870 KEKVKQPSIL--IGGELMKYQLEGLEWLVSLYNNNLHGILADEMGLGKTIQTIS-LFAYL 926
Query: 149 KE--GHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDK 189
KE + L+ PLST+ NW EF W P V+TY G+K
Sbjct: 927 KEFKNNINVKNLIIVPLSTLPNWISEFNRWCPSLNVITYRGNK 969
>RGD|1302988 [details] [associations]
symbol:Smarca2 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 2"
species:10116 "Rattus norvegicus" [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO] [GO:0016514 "SWI/SNF complex"
evidence=ISO] [GO:0030308 "negative regulation of cell growth"
evidence=ISO] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=ISO] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=ISO] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISO]
[GO:0045111 "intermediate filament cytoskeleton" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0071564 "npBAF complex" evidence=ISO] [GO:0071565 "nBAF
complex" evidence=ISO] [GO:0071778 "WINAC complex" evidence=ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 RGD:1302988 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 KO:K11647 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 CTD:6595 HOGENOM:HOG000172363 HOVERGEN:HBG056636
OrthoDB:EOG418BMJ IPI:IPI00464435 EMBL:AY643746
RefSeq:NP_001004446.1 UniGene:Rn.94939 ProteinModelPortal:Q6DUH4
SMR:Q6DUH4 STRING:Q6DUH4 GeneID:361745 KEGG:rno:361745
UCSC:RGD:1302988 InParanoid:Q6DUH4 NextBio:677480
Genevestigator:Q6DUH4 Uniprot:Q6DUH4
Length = 1597
Score = 212 (79.7 bits), Expect = 9.9e-16, P = 9.9e-16
Identities = 43/101 (42%), Positives = 61/101 (60%)
Query: 87 LRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYS 146
+ ++ EKQ L + G H YQL+G+ W+ + N++ ILADEMG GKTIQTI +
Sbjct: 715 ISERVEKQSALLIN-GTLKH-YQLQGLEWMVSLYNNNLNGILADEMGPGKTIQTIALITY 772
Query: 147 LFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVG 187
L + GP+L+ PLST+ NW EF+ WAP ++Y G
Sbjct: 773 LMEHKGLNGPYLIIVPLSTLSNWTYEFDKWAPSAVKISYKG 813
>ZFIN|ZDB-GENE-070705-296 [details] [associations]
symbol:si:dkey-148b12.1 "si:dkey-148b12.1"
species:7955 "Danio rerio" [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0031491
"nucleosome binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 ZFIN:ZDB-GENE-070705-296 GO:GO:0005524 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
GO:GO:0043044 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
SUPFAM:SSF101224 HOVERGEN:HBG056329 KO:K11727 OrthoDB:EOG44J2H9
EMBL:CR848717 EMBL:CU104724 IPI:IPI00488326 RefSeq:NP_001093467.1
UniGene:Dr.81160 SMR:A5WUY4 Ensembl:ENSDART00000020725
GeneID:559803 KEGG:dre:559803 OMA:IGHAWIN NextBio:20883144
Uniprot:A5WUY4
Length = 1036
Score = 209 (78.6 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 45/109 (41%), Positives = 64/109 (58%)
Query: 90 KYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFK 149
++E+ P ++ + G L YQ+ G+NW+ + I+ ILADEMGLGKT+QTI L L
Sbjct: 130 RFEESPSYIKN-GT-LRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTIALLGYLKH 187
Query: 150 EGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIV-LRD 197
+ GP +V P ST+ NW EF+ W P V +G+KD R +RD
Sbjct: 188 YRNIPGPHMVLVPKSTLHNWMNEFKRWVPTLKAVCLIGNKDERAAFIRD 236
>SGD|S000002742 [details] [associations]
symbol:SWR1 "Swi2/Snf2-related ATPase structural component of
the SWR1 complex" species:4932 "Saccharomyces cerevisiae"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000812 "Swr1 complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IGI;IMP;IDA] [GO:0005198 "structural molecule
activity" evidence=IMP] [GO:0043486 "histone exchange"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SGD:S000002742 GO:GO:0005524 GO:GO:0006355 GO:GO:0003677
GO:GO:0005198 EMBL:BK006938 GO:GO:0006351 GO:GO:0000812
GO:GO:0004386 GO:GO:0043486 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 PROSITE:PS51204 GeneTree:ENSGT00530000063427
EMBL:U51032 KO:K11681 HOGENOM:HOG000186095 OrthoDB:EOG49S9FK
PIR:S70099 RefSeq:NP_010621.1 ProteinModelPortal:Q05471 SMR:Q05471
DIP:DIP-2845N IntAct:Q05471 MINT:MINT-1165514 STRING:Q05471
PaxDb:Q05471 EnsemblFungi:YDR334W GeneID:851934 KEGG:sce:YDR334W
CYGD:YDR334w OMA:APGFKVL NextBio:970001 Genevestigator:Q05471
GermOnline:YDR334W Uniprot:Q05471
Length = 1514
Score = 211 (79.3 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 43/88 (48%), Positives = 55/88 (62%)
Query: 105 LHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLS 164
L YQ +G+NWL + + + ILADEMGLGKTIQTI+ L L E GP L+ P S
Sbjct: 696 LRTYQKQGLNWLASLYNNHTNGILADEMGLGKTIQTISLLAYLACEKENWGPHLIVVPTS 755
Query: 165 TIINWEREFETWAPDFYVVTYVGDKDCR 192
++NWE EF+ +AP F V+TY G R
Sbjct: 756 VLLNWEMEFKRFAPGFKVLTYYGSPQQR 783
>UNIPROTKB|F1NS62 [details] [associations]
symbol:CHD1L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0006974 GO:GO:0006338
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
OMA:TCQTIAL GeneTree:ENSGT00670000098110 EMBL:AADN02037964
EMBL:AADN02037962 EMBL:AADN02037963 IPI:IPI00573125
Ensembl:ENSGALT00000024254 Uniprot:F1NS62
Length = 895
Score = 208 (78.3 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 45/98 (45%), Positives = 60/98 (61%)
Query: 101 TGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVS 160
TG++L YQL+G+NWL + IL DEMGLGKT QTI+ L L K+ K L+
Sbjct: 42 TGIKLRPYQLDGVNWLVQCYQVQHGCILGDEMGLGKTCQTISLLLYLTKKLTNKERSLIL 101
Query: 161 APLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDH 198
PLS + NW+ E E +AP VTYVG+K+ R L+ +
Sbjct: 102 CPLSVLSNWKEELERFAPGLSFVTYVGNKEERYKLQQN 139
>POMBASE|SPAC20G8.08c [details] [associations]
symbol:fft1 "fun thirty related protein Fft1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000790
"nuclear chromatin" evidence=NAS] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISM] [GO:0005524 "ATP binding" evidence=ISM] [GO:0005634
"nucleus" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=ISS] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 PomBase:SPAC20G8.08c
GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003677
GO:GO:0006338 GO:GO:0000790 GO:GO:0004003 HSSP:Q97XQ5
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0016585 PIR:T38130 RefSeq:NP_593325.1
ProteinModelPortal:P87114 EnsemblFungi:SPAC20G8.08c.1
GeneID:2541983 KEGG:spo:SPAC20G8.08c OrthoDB:EOG4BCHW4
NextBio:20803065 Uniprot:P87114
Length = 944
Score = 208 (78.3 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 48/110 (43%), Positives = 63/110 (57%)
Query: 84 TTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITF 143
T + +Y Q P +G+ L +YQ+ G+NWL + + ILADEMGLGKT Q I+F
Sbjct: 393 TGSISYEYNSQQPSSIASGITLKSYQIVGLNWLCLMYKAKLSGILADEMGLGKTCQVISF 452
Query: 144 LYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRI 193
L SL KE + LV P ST+ NW REFE + P V +Y G + RI
Sbjct: 453 LASL-KEKGIQNRHLVVVPSSTLGNWLREFEKFCPSLRVESYSGTQSERI 501
>RGD|1310969 [details] [associations]
symbol:Ino80 "INO80 homolog (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0000070 "mitotic sister chromatid
segregation" evidence=ISO] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IEA;ISO] [GO:0003678 "DNA helicase activity"
evidence=ISO] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0006200 "ATP catabolic process" evidence=ISO]
[GO:0006302 "double-strand break repair" evidence=ISO] [GO:0006338
"chromatin remodeling" evidence=ISO] [GO:0010571 "positive
regulation of DNA replication involved in S phase" evidence=ISO]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0030307 "positive
regulation of cell growth" evidence=ISO] [GO:0031011 "Ino80
complex" evidence=ISO] [GO:0032508 "DNA duplex unwinding"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043014 "alpha-tubulin binding" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0051225 "spindle assembly"
evidence=ISO] [GO:0070914 "UV-damage excision repair" evidence=ISO]
[GO:0071479 "cellular response to ionizing radiation" evidence=ISO]
[GO:2000045 "regulation of G1/S transition of mitotic cell cycle"
evidence=ISO] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490 RGD:1310969
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GeneTree:ENSGT00680000100052
IPI:IPI00569811 Ensembl:ENSRNOT00000031672 UCSC:RGD:1310969
Uniprot:D4A6Q6
Length = 1553
Score = 210 (79.0 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 41/85 (48%), Positives = 57/85 (67%)
Query: 104 QLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPL 163
+L YQL+G+NWL + Q I+ ILADEMGLGKT+Q+I L L + + GPFL+ +P
Sbjct: 519 KLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENIWGPFLIISPA 578
Query: 164 STIINWEREFETWAPDFYVVTYVGD 188
ST+ NW +EF + P F V+ Y G+
Sbjct: 579 STLNNWHQEFTRFVPKFKVLPYWGN 603
>POMBASE|SPAC29B12.01 [details] [associations]
symbol:ino80 "SNF2 family helicase Ino80" species:4896
"Schizosaccharomyces pombe" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=ISO] [GO:0006338 "chromatin remodeling" evidence=IPI]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IDA] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 PomBase:SPAC29B12.01 GO:GO:0005524
EMBL:CU329670 GO:GO:0006355 GenomeReviews:CU329670_GR GO:GO:0003677
GO:GO:0006281 GO:GO:0006351 GO:GO:0016568 GO:GO:0031011 HSSP:Q97XQ5
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0043140 KO:K11665 HOGENOM:HOG000048482 OrthoDB:EOG41G6C8
RefSeq:NP_001018299.1 ProteinModelPortal:O14148 STRING:O14148
EnsemblFungi:SPAC29B12.01.1 GeneID:3361566 KEGG:spo:SPAC29B12.01
OMA:INDHNSA NextBio:20811604 Uniprot:O14148
Length = 1604
Score = 210 (79.0 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 50/117 (42%), Positives = 69/117 (58%)
Query: 81 EKPTTDLRKKYE-KQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQ 139
+ PT L +E KQP L +L YQL+G+NWL + Q I+ ILADEMGLGKT+Q
Sbjct: 822 QNPT--LVNAFEVKQPKMLM---CKLKEYQLKGLNWLANLYEQGINGILADEMGLGKTVQ 876
Query: 140 TITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLR 196
+I+ + L + + GPFLV AP ST+ NW++E + P + Y G R +LR
Sbjct: 877 SISVMAYLAETHNIWGPFLVIAPASTLHNWQQEITRFVPKLKCIPYWGSTKDRKILR 933
>FB|FBgn0011604 [details] [associations]
symbol:Iswi "Imitation SWI" species:7227 "Drosophila
melanogaster" [GO:0006338 "chromatin remodeling"
evidence=ISS;NAS;TAS] [GO:0016589 "NURF complex"
evidence=NAS;IDA;TAS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IGI;IDA] [GO:0000166 "nucleotide binding"
evidence=TAS] [GO:0016584 "nucleosome positioning" evidence=IDA]
[GO:0006334 "nucleosome assembly" evidence=IDA] [GO:0016590 "ACF
complex" evidence=NAS;IDA;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IMP;IDA] [GO:0008623 "CHRAC"
evidence=NAS;IDA;TAS] [GO:0006333 "chromatin assembly or
disassembly" evidence=IDA;TAS] [GO:0042766 "nucleosome
mobilization" evidence=IDA;TAS] [GO:0016887 "ATPase activity"
evidence=NAS] [GO:0035060 "brahma complex" evidence=IDA]
[GO:0003678 "DNA helicase activity" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0006351 "transcription,
DNA-dependent" evidence=IDA] [GO:0005667 "transcription factor
complex" evidence=IPI] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035076 "ecdysone
receptor-mediated signaling pathway" evidence=IGI] [GO:0007517
"muscle organ development" evidence=IMP] [GO:0048813 "dendrite
morphogenesis" evidence=IMP] [GO:0042752 "regulation of circadian
rhythm" evidence=IMP] [GO:0006325 "chromatin organization"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0031213 "RSF complex"
evidence=IPI] [GO:0005700 "polytene chromosome" evidence=IDA]
[GO:0070615 "nucleosome-dependent ATPase activity" evidence=IDA]
[GO:0035063 "nuclear speck organization" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 EMBL:AE013599 GO:GO:0005524
GO:GO:0045892 GO:GO:0003677 GO:GO:0045944 GO:GO:0006351
GO:GO:0042752 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0048813 GO:GO:0007517 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0005700 GO:GO:0035076 GO:GO:0042766 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0031491 GO:GO:0043044 GO:GO:0016584 GO:GO:0006334
GO:GO:0016589 GO:GO:0016590 GO:GO:0008623 GO:GO:0008094
ChiTaRS:SMARCA1 GeneTree:ENSGT00680000100002 KO:K11654
SUPFAM:SSF101224 EMBL:L27127 EMBL:AY094908 EMBL:BT044562 PIR:A56533
RefSeq:NP_523719.1 RefSeq:NP_725203.1 RefSeq:NP_725204.1
UniGene:Dm.2581 PDB:1OFC PDBsum:1OFC ProteinModelPortal:Q24368
SMR:Q24368 DIP:DIP-24067N IntAct:Q24368 MINT:MINT-252539
STRING:Q24368 PaxDb:Q24368 PRIDE:Q24368 EnsemblMetazoa:FBtr0087841
EnsemblMetazoa:FBtr0087842 EnsemblMetazoa:FBtr0087843 GeneID:36390
KEGG:dme:Dmel_CG8625 CTD:36390 FlyBase:FBgn0011604
InParanoid:Q24368 OMA:EDYCHWR OrthoDB:EOG4M0CGK PhylomeDB:Q24368
EvolutionaryTrace:Q24368 GenomeRNAi:36390 NextBio:798287
Bgee:Q24368 GermOnline:CG8625 GO:GO:0031213 GO:GO:0070615
GO:GO:0035063 Uniprot:Q24368
Length = 1027
Score = 207 (77.9 bits), Expect = 1.9e-15, P = 1.9e-15
Identities = 43/109 (39%), Positives = 65/109 (59%)
Query: 90 KYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFK 149
+++ P ++ +G ++ YQ+ G+NW+ + I+ ILADEMGLGKT+QTI+ L L
Sbjct: 115 RFDASPAYIK-SG-EMRDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKH 172
Query: 150 EGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCR-IVLRD 197
+ GP +V P ST+ NW EF+ W P V +GD+D R +RD
Sbjct: 173 FKNQAGPHIVIVPKSTLQNWVNEFKKWCPSLRAVCLIGDQDTRNTFIRD 221
>POMBASE|SPAC25A8.01c [details] [associations]
symbol:fft3 "fun thirty related protein Fft3"
species:4896 "Schizosaccharomyces pombe" [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0003677 "DNA binding" evidence=ISM]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IDA] [GO:0032017 "positive regulation of Ran
protein signal transduction" evidence=IGI] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC25A8.01c GO:GO:0005524 EMBL:CU329670
GO:GO:0003677 GO:GO:0006338 GO:GO:0000790 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0016585 GO:GO:0008094 OrthoDB:EOG4BCHW4 EMBL:AB027947
PIR:T38371 RefSeq:NP_593617.1 ProteinModelPortal:O42861
STRING:O42861 EnsemblFungi:SPAC25A8.01c.1 GeneID:2541531
KEGG:spo:SPAC25A8.01c HOGENOM:HOG000195581 OMA:NRASERY
NextBio:20802628 GO:GO:0032017 Uniprot:O42861
Length = 922
Score = 206 (77.6 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 49/123 (39%), Positives = 66/123 (53%)
Query: 85 TDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFL 144
T + PP ++L YQ+ GINWL + + ILADEMGLGKT QTI F
Sbjct: 367 TPANSSFITTPPASFSPDIKLQDYQIIGINWLYLLYELKLAGILADEMGLGKTCQTIAF- 425
Query: 145 YSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVLRDHDISWED 204
+SL + + GP LV AP ST+ NW REF + P + Y G + R +R+ S +D
Sbjct: 426 FSLLMDKNINGPHLVIAPASTMENWLREFAKFCPKLKIELYYGSQVEREEIRERINSNKD 485
Query: 205 TAN 207
+ N
Sbjct: 486 SYN 488
>MGI|MGI:1935129 [details] [associations]
symbol:Smarca5 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 5"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
evidence=IDA] [GO:0000793 "condensed chromosome" evidence=ISO]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005677 "chromatin silencing complex" evidence=IDA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006302 "double-strand
break repair" evidence=IMP] [GO:0006333 "chromatin assembly or
disassembly" evidence=IDA] [GO:0006334 "nucleosome assembly"
evidence=ISO] [GO:0006338 "chromatin remodeling"
evidence=ISO;IGI;IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0009790 "embryo development"
evidence=IMP] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016584 "nucleosome positioning" evidence=ISO] [GO:0016589
"NURF complex" evidence=ISO] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016817 "hydrolase activity, acting on acid
anhydrides" evidence=IEA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0031213 "RSF complex" evidence=ISO] [GO:0031491 "nucleosome
binding" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP;TAS] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00717
MGI:MGI:1935129 GO:GO:0005524 GO:GO:0045893 GO:GO:0005730
GO:GO:0003677 GO:GO:0006352 GO:GO:0016887 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0006338 GO:GO:0009790 GO:GO:0043596
GO:GO:0006333 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183
GO:GO:0006302 GO:GO:0004386 GO:GO:0000793 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
GO:GO:0043044 GO:GO:0016584 GO:GO:0006334 GO:GO:0005677
GO:GO:0016589 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
KO:K11654 SUPFAM:SSF101224 OMA:EDYCHWR GO:GO:0031213
HOVERGEN:HBG056329 OrthoDB:EOG44J2H9 CTD:8467 EMBL:AF375046
EMBL:AF325921 EMBL:BC021922 EMBL:BC053069 EMBL:AK039811
EMBL:AK052320 IPI:IPI00396739 RefSeq:NP_444354.2 UniGene:Mm.246803
ProteinModelPortal:Q91ZW3 SMR:Q91ZW3 DIP:DIP-36073N IntAct:Q91ZW3
MINT:MINT-1867515 STRING:Q91ZW3 PhosphoSite:Q91ZW3 PaxDb:Q91ZW3
PRIDE:Q91ZW3 Ensembl:ENSMUST00000043359 GeneID:93762 KEGG:mmu:93762
UCSC:uc009mja.1 InParanoid:Q91ZW3 NextBio:351651 Bgee:Q91ZW3
Genevestigator:Q91ZW3 GermOnline:ENSMUSG00000031715 Uniprot:Q91ZW3
Length = 1051
Score = 206 (77.6 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 46/114 (40%), Positives = 67/114 (58%)
Query: 85 TDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFL 144
T++ ++E P ++ G +L YQ+ G+NWL + I+ ILADEMGLGKT+QTI+ L
Sbjct: 161 TNVCTRFEDSPSYVK-WG-KLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLL 218
Query: 145 YSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIV-LRD 197
+ + GP +V P ST+ NW EF+ W P V +GDK+ R +RD
Sbjct: 219 GYMKHYRNIPGPHMVLVPKSTLHNWMSEFKKWVPTLRSVCLIGDKEQRAAFVRD 272
>RGD|1308832 [details] [associations]
symbol:Smarca5 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 5"
species:10116 "Rattus norvegicus" [GO:0000183 "chromatin silencing
at rDNA" evidence=ISO] [GO:0000793 "condensed chromosome"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA;ISO]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005677 "chromatin silencing complex" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006302 "double-strand break repair"
evidence=ISO] [GO:0006333 "chromatin assembly or disassembly"
evidence=ISO] [GO:0006334 "nucleosome assembly" evidence=ISO]
[GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0009790
"embryo development" evidence=ISO] [GO:0016584 "nucleosome
positioning" evidence=ISO] [GO:0016589 "NURF complex" evidence=ISO]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0031213 "RSF
complex" evidence=ISO] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0043596 "nuclear
replication fork" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 RGD:1308832 GO:GO:0005524 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 OMA:EDYCHWR
IPI:IPI00359419 PRIDE:F1LNL2 Ensembl:ENSRNOT00000024568
UCSC:RGD:1308832 ArrayExpress:F1LNL2 Uniprot:F1LNL2
Length = 1051
Score = 206 (77.6 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 46/114 (40%), Positives = 67/114 (58%)
Query: 85 TDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFL 144
T++ ++E P ++ G +L YQ+ G+NWL + I+ ILADEMGLGKT+QTI+ L
Sbjct: 161 TNVCTRFEDSPSYVK-WG-KLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLL 218
Query: 145 YSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIV-LRD 197
+ + GP +V P ST+ NW EF+ W P V +GDK+ R +RD
Sbjct: 219 GYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRD 272
>UNIPROTKB|F1N052 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043596 "nuclear replication fork" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0031213 "RSF
complex" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0016589 "NURF complex" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0009790 "embryo development"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005677 "chromatin silencing complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0000793 "condensed chromosome"
evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 GO:GO:0005524
GO:GO:0005730 GO:GO:0003677 GO:GO:0006352 GO:GO:0016887
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009790 GO:GO:0043596
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183 GO:GO:0006302
GO:GO:0004386 GO:GO:0000793 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
GO:GO:0006334 GO:GO:0005677 GO:GO:0016589
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 OMA:EDYCHWR
GO:GO:0031213 EMBL:DAAA02044371 IPI:IPI00868566 UniGene:Bt.103096
Ensembl:ENSBTAT00000004408 Uniprot:F1N052
Length = 1052
Score = 206 (77.6 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 46/114 (40%), Positives = 67/114 (58%)
Query: 85 TDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFL 144
T++ ++E P ++ G +L YQ+ G+NWL + I+ ILADEMGLGKT+QTI+ L
Sbjct: 162 TNVCTRFEDSPSYVK-WG-KLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLL 219
Query: 145 YSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIV-LRD 197
+ + GP +V P ST+ NW EF+ W P V +GDK+ R +RD
Sbjct: 220 GYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRD 273
>UNIPROTKB|E2QWV0 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0043596 "nuclear replication fork"
evidence=IEA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0031213 "RSF complex" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA]
[GO:0016584 "nucleosome positioning" evidence=IEA] [GO:0009790
"embryo development" evidence=IEA] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0006334 "nucleosome
assembly" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005677
"chromatin silencing complex" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000793 "condensed chromosome" evidence=IEA] [GO:0000183
"chromatin silencing at rDNA" evidence=IEA] [GO:0031491 "nucleosome
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0005730
GO:GO:0003677 GO:GO:0006352 GO:GO:0016887 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009790 GO:GO:0043596 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0000183 GO:GO:0006302 GO:GO:0004386
GO:GO:0000793 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0031491 GO:GO:0043044 GO:GO:0016584 GO:GO:0006334
GO:GO:0005677 GO:GO:0016589 GeneTree:ENSGT00680000100002 KO:K11654
SUPFAM:SSF101224 OMA:EDYCHWR GO:GO:0031213 CTD:8467
EMBL:AAEX03010002 RefSeq:XP_532676.1 ProteinModelPortal:E2QWV0
Ensembl:ENSCAFT00000012062 GeneID:475451 KEGG:cfa:475451
NextBio:20851293 Uniprot:E2QWV0
Length = 1052
Score = 206 (77.6 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 46/114 (40%), Positives = 67/114 (58%)
Query: 85 TDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFL 144
T++ ++E P ++ G +L YQ+ G+NWL + I+ ILADEMGLGKT+QTI+ L
Sbjct: 162 TNVCTRFEDSPSYVK-WG-KLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLL 219
Query: 145 YSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIV-LRD 197
+ + GP +V P ST+ NW EF+ W P V +GDK+ R +RD
Sbjct: 220 GYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRD 273
>UNIPROTKB|O60264 [details] [associations]
symbol:SMARCA5 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A member 5"
species:9606 "Homo sapiens" [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0000183 "chromatin silencing at rDNA" evidence=IEA] [GO:0005677
"chromatin silencing complex" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=IEA] [GO:0009790 "embryo
development" evidence=IEA] [GO:0006334 "nucleosome assembly"
evidence=IDA;TAS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IDA]
[GO:0016584 "nucleosome positioning" evidence=IDA] [GO:0031213 "RSF
complex" evidence=IPI] [GO:0042393 "histone binding" evidence=IDA]
[GO:0005524 "ATP binding" evidence=IDA] [GO:0000793 "condensed
chromosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0016589 "NURF complex" evidence=IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0034080
"CENP-A containing nucleosome assembly at centromere" evidence=TAS]
[GO:0043596 "nuclear replication fork" evidence=IDA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IMP] [GO:0006200 "ATP
catabolic process" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 GO:GO:0005524
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0005730 GO:GO:0003677
GO:GO:0006352 GO:GO:0006357 GO:GO:0016887 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009790 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0000183 GO:GO:0006302 GO:GO:0004386 GO:GO:0000793
GO:GO:0034080 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0016584 GO:GO:0005677
GO:GO:0016589 HOGENOM:HOG000192862 KO:K11654 SUPFAM:SSF101224
OMA:EDYCHWR GO:GO:0031213 HOVERGEN:HBG056329 OrthoDB:EOG44J2H9
EMBL:AB010882 EMBL:BC023144 IPI:IPI00297211 RefSeq:NP_003592.3
UniGene:Hs.558422 ProteinModelPortal:O60264 SMR:O60264
IntAct:O60264 MINT:MINT-2981772 STRING:O60264 PhosphoSite:O60264
PaxDb:O60264 PeptideAtlas:O60264 PRIDE:O60264 DNASU:8467
Ensembl:ENST00000283131 GeneID:8467 KEGG:hsa:8467 UCSC:uc003ijg.3
CTD:8467 GeneCards:GC04P144434 HGNC:HGNC:11101 HPA:CAB005227
HPA:HPA008751 MIM:603375 neXtProt:NX_O60264 PharmGKB:PA35951
InParanoid:O60264 PhylomeDB:O60264 GenomeRNAi:8467 NextBio:31688
ArrayExpress:O60264 Bgee:O60264 CleanEx:HS_SMARCA5
Genevestigator:O60264 GermOnline:ENSG00000153147 Uniprot:O60264
Length = 1052
Score = 206 (77.6 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 46/114 (40%), Positives = 67/114 (58%)
Query: 85 TDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFL 144
T++ ++E P ++ G +L YQ+ G+NWL + I+ ILADEMGLGKT+QTI+ L
Sbjct: 162 TNVCTRFEDSPSYVK-WG-KLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLL 219
Query: 145 YSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIV-LRD 197
+ + GP +V P ST+ NW EF+ W P V +GDK+ R +RD
Sbjct: 220 GYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRD 273
>UNIPROTKB|F1RRG9 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043596 "nuclear replication fork" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0031213 "RSF
complex" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0016589 "NURF complex" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0009790 "embryo development"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005677 "chromatin silencing complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0000793 "condensed chromosome"
evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 GO:GO:0005524
GO:GO:0005730 GO:GO:0003677 GO:GO:0006352 GO:GO:0016887
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009790 GO:GO:0043596
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183 GO:GO:0006302
GO:GO:0004386 GO:GO:0000793 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
GO:GO:0006334 GO:GO:0005677 GO:GO:0016589
GeneTree:ENSGT00680000100002 KO:K11654 SUPFAM:SSF101224 OMA:EDYCHWR
GO:GO:0031213 CTD:8467 EMBL:CU463195 RefSeq:XP_003129222.2
UniGene:Ssc.97261 Ensembl:ENSSSCT00000009907 GeneID:100188903
KEGG:ssc:100188903 ArrayExpress:F1RRG9 Uniprot:F1RRG9
Length = 1052
Score = 206 (77.6 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 46/114 (40%), Positives = 67/114 (58%)
Query: 85 TDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFL 144
T++ ++E P ++ G +L YQ+ G+NWL + I+ ILADEMGLGKT+QTI+ L
Sbjct: 162 TNVCTRFEDSPSYVK-WG-KLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLL 219
Query: 145 YSLFKEGHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIV-LRD 197
+ + GP +V P ST+ NW EF+ W P V +GDK+ R +RD
Sbjct: 220 GYMKHYRNIPGPHMVLVPKSTLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRD 273
>WB|WBGene00007027 [details] [associations]
symbol:ssl-1 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0003677 GO:GO:0040011 GO:GO:0016568 GO:GO:0040035
GO:GO:0004386 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 PROSITE:PS51204 GeneTree:ENSGT00530000063427 KO:K11320
EMBL:AL132904 EMBL:AY551965 RefSeq:NP_001255179.1
RefSeq:NP_001255180.1 RefSeq:NP_001255181.1 RefSeq:NP_001255182.1
UniGene:Cel.203 ProteinModelPortal:Q9NEL2 SMR:Q9NEL2
MINT:MINT-3384018 PaxDb:Q9NEL2 EnsemblMetazoa:Y111B2A.22a
GeneID:190954 KEGG:cel:CELE_Y111B2A.22 UCSC:Y111B2A.22 CTD:190954
WormBase:Y111B2A.22a WormBase:Y111B2A.22b WormBase:Y111B2A.22c
WormBase:Y111B2A.22d InParanoid:Q9NEL2 OMA:HLACSES NextBio:947488
ArrayExpress:Q9NEL2 Uniprot:Q9NEL2
Length = 2395
Score = 210 (79.0 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 45/96 (46%), Positives = 60/96 (62%)
Query: 93 KQP-PFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEG 151
K P PFL G QL YQ+ G++W+ + +N++ ILADEMGLGKTIQTI+ L +
Sbjct: 547 KTPVPFLI-RG-QLREYQMVGLDWMVTLYEKNLNGILADEMGLGKTIQTISLLAHMACSE 604
Query: 152 HCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVG 187
GP L+ P S I+NWE EF+ W P ++TY G
Sbjct: 605 SIWGPHLIVVPTSVILNWEMEFKKWCPALKILTYFG 640
>UNIPROTKB|G3N326 [details] [associations]
symbol:LOC788113 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR000330 Pfam:PF00176
GO:GO:0005524 GO:GO:0003677 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529
PROSITE:PS51204 GeneTree:ENSGT00530000063427 EMBL:DAAA02057908
Ensembl:ENSBTAT00000063921 Uniprot:G3N326
Length = 934
Score = 205 (77.2 bits), Expect = 2.7e-15, P = 2.7e-15
Identities = 56/143 (39%), Positives = 73/143 (51%)
Query: 60 ELQEDEDGASGSK-PRRYTP-PPEKPTTDLRKKYEKQPP---FLDDTGM----------Q 104
E Q + DG SG P T P+K TD+ E P L T + Q
Sbjct: 548 EEQSEADGGSGPPTPGPTTTLGPKKEITDIAAAAESLQPKGYTLATTQVKTPIPLLLRGQ 607
Query: 105 LHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLS 164
L YQ G++WL + + ++ ILADEMGLGKTIQTI+ L L E GP L+ P S
Sbjct: 608 LREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTISLLAHLACEKGNWGPHLIIVPTS 667
Query: 165 TIINWEREFETWAPDFYVVTYVG 187
++NWE E + W P F ++TY G
Sbjct: 668 VMLNWEMELKRWCPSFKILTYYG 690
>DICTYBASE|DDB_G0292948 [details] [associations]
symbol:isw "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0016587 "Isw1
complex" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 dictyBase:DDB_G0292948 GO:GO:0005524
GenomeReviews:CM000155_GR GO:GO:0003677 EMBL:AAFI02000197
GO:GO:0016887 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
GO:GO:0043044 GO:GO:0016587 KO:K11654 SUPFAM:SSF101224
RefSeq:XP_629432.1 ProteinModelPortal:Q54CI4 STRING:Q54CI4
PRIDE:Q54CI4 EnsemblProtists:DDB0231763 GeneID:8628951
KEGG:ddi:DDB_G0292948 InParanoid:Q54CI4 OMA:IREANAF
ProtClustDB:CLSZ2728711 Uniprot:Q54CI4
Length = 1221
Score = 205 (77.2 bits), Expect = 3.9e-15, P = 3.9e-15
Identities = 43/102 (42%), Positives = 61/102 (59%)
Query: 91 YEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKE 150
+ PP++ M+ YQ+ G+NWL + + I+ ILADEMGLGKT+QTI+ L L +
Sbjct: 264 FTSSPPYIKSGTMR--DYQVYGLNWLIQLYERGINGILADEMGLGKTLQTISLLGYLSEY 321
Query: 151 GHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCR 192
+GP L+ AP ST+ W +EF W P VV + G K+ R
Sbjct: 322 KGIRGPHLIIAPKSTLSGWAKEFTRWCPFLRVVRFHGSKEER 363
>TAIR|locus:2062840 [details] [associations]
symbol:SYD "SPLAYED" species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009908 "flower development"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=IPI] [GO:0010199 "organ
boundary specification between lateral organs and the meristem"
evidence=IGI] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=NAS] [GO:0040029 "regulation of gene expression,
epigenetic" evidence=RCA;IMP] [GO:0009611 "response to wounding"
evidence=IEP] [GO:0005829 "cytosol" evidence=IDA] [GO:0000226
"microtubule cytoskeleton organization" evidence=RCA] [GO:0000911
"cytokinesis by cell plate formation" evidence=RCA] [GO:0006306
"DNA methylation" evidence=RCA] [GO:0006342 "chromatin silencing"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0009845
"seed germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=RCA] [GO:0016567
"protein ubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] [GO:0050826 "response to
freezing" evidence=RCA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 SMART:SM00951 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GO:GO:0009611 GO:GO:0006355
GO:GO:0003677 GO:GO:0003682 GO:GO:0016887 GO:GO:0004386
GO:GO:0009908 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0043044 GO:GO:0010199 GO:GO:0040029 InterPro:IPR014012
PROSITE:PS51204 IPI:IPI00516285 RefSeq:NP_850116.1 UniGene:At.22414
PRIDE:F4IHS2 EnsemblPlants:AT2G28290.1 GeneID:817375
KEGG:ath:AT2G28290 OMA:SDLYAIS Uniprot:F4IHS2
Length = 3574
Score = 210 (79.0 bits), Expect = 4.1e-15, P = 4.1e-15
Identities = 48/135 (35%), Positives = 72/135 (53%)
Query: 61 LQEDEDGASGSKPRRYTPPPEK---PTTDLRKKYEKQPPFLDDTGMQLHAYQLEGINWLR 117
L E+ED + +K Y EK +++ +QP L G +L YQ+ G+ WL
Sbjct: 711 LIENEDESDQAK--HYLESNEKYYLMAHSIKENINEQPSSL--VGGKLREYQMNGLRWLV 766
Query: 118 YSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPLSTIINWEREFETWA 177
+ +++ ILADEMGLGKT+Q I+ + L + + +GPFLV P S + W+ E WA
Sbjct: 767 SLYNNHLNGILADEMGLGKTVQVISLICYLMETKNDRGPFLVVVPSSVLPGWQSEINFWA 826
Query: 178 PDFYVVTYVGDKDCR 192
P + + Y G D R
Sbjct: 827 PSIHKIVYCGTPDER 841
>UNIPROTKB|F1RG74 [details] [associations]
symbol:SRCAP "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043234 "protein complex" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR017956
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00384
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005794
GO:GO:0043234 GO:GO:0003677 InterPro:IPR020478 PRINTS:PR00929
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
GeneTree:ENSGT00530000063427 OMA:LGTGNPQ EMBL:FP102572
Ensembl:ENSSSCT00000008537 Uniprot:F1RG74
Length = 3230
Score = 201 (75.8 bits), Expect = 4.2e-15, Sum P(2) = 4.2e-15
Identities = 40/84 (47%), Positives = 53/84 (63%)
Query: 104 QLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKEGHCKGPFLVSAPL 163
QL YQ G++WL + + ++ ILADEMGLGKTIQTI+ L L E GP L+ P
Sbjct: 624 QLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTISLLAHLACEKGNWGPHLIIVPT 683
Query: 164 STIINWEREFETWAPDFYVVTYVG 187
S ++NWE E + W P F ++TY G
Sbjct: 684 SVMLNWEMELKRWCPSFKILTYYG 707
Score = 40 (19.1 bits), Expect = 4.2e-15, Sum P(2) = 4.2e-15
Identities = 13/33 (39%), Positives = 15/33 (45%)
Query: 60 ELQEDEDGASGSKPRRYTPPPEKPTTDLRKKYE 92
E + + DG SG PP PTT L K E
Sbjct: 565 EERSEADGGSG-------PPTPGPTTTLGPKKE 590
>UNIPROTKB|G4NCV5 [details] [associations]
symbol:MGG_01012 "ISWI chromatin-remodeling complex ATPase
ISW2" species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 EMBL:CM001235 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
SUPFAM:SSF101224 RefSeq:XP_003717932.1 EnsemblFungi:MGG_01012T0
GeneID:2674262 KEGG:mgr:MGG_01012 Uniprot:G4NCV5
Length = 1128
Score = 204 (76.9 bits), Expect = 4.5e-15, P = 4.5e-15
Identities = 46/105 (43%), Positives = 59/105 (56%)
Query: 91 YEKQPPFLDDTGMQLHAYQLEGINWLRYSWGQNIDTILADEMGLGKTIQTITFLYSLFKE 150
+ + P F+ T + YQ+ G+NWL I ILADEMGLGKT+QTI+FL L
Sbjct: 175 FRESPAFIQGT---MRDYQIAGLNWLISLHENGISGILADEMGLGKTLQTISFLGYLRHI 231
Query: 151 GHCKGPFLVSAPLSTIINWEREFETWAPDFYVVTYVGDKDCRIVL 195
GP LV P ST+ NW+REF W P+ V+ G K+ R L
Sbjct: 232 MGITGPHLVIVPKSTLDNWKREFGKWTPEVNVLVLQGAKEERAAL 276
WARNING: HSPs involving 160 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.138 0.441 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 209 162 0.00079 107 3 11 22 0.41 32
30 0.44 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 410
No. of states in DFA: 597 (63 KB)
Total size of DFA: 179 KB (2103 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.36u 0.11s 17.47t Elapsed: 00:00:01
Total cpu time: 17.38u 0.11s 17.49t Elapsed: 00:00:01
Start: Thu Aug 15 11:06:00 2013 End: Thu Aug 15 11:06:01 2013
WARNINGS ISSUED: 2