BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14605
(139 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q12873|CHD3_HUMAN Chromodomain-helicase-DNA-binding protein 3 OS=Homo sapiens GN=CHD3
PE=1 SV=3
Length = 2000
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 44/57 (77%), Positives = 48/57 (84%)
Query: 4 IQDLQTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDG 60
+ +T+HQDYCEVCQQGGEIILCDTCPRAYHL CLDPELD PEGKWSCP C +G
Sbjct: 371 VDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEG 427
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 34/48 (70%)
Query: 10 EHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCV 57
+H +YC VC+ GGE++ CD C +YH+ CL+P L + P G+W CPRC
Sbjct: 454 DHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCT 501
>sp|O97159|CHDM_DROME Chromodomain-helicase-DNA-binding protein Mi-2 homolog
OS=Drosophila melanogaster GN=Mi-2 PE=1 SV=2
Length = 1982
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 44/52 (84%), Positives = 47/52 (90%)
Query: 5 QDLQTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
+D + EHQDYCEVCQQGGEIILCDTCPRAYHL CL+PELDE PEGKWSCP C
Sbjct: 370 EDGEHEHQDYCEVCQQGGEIILCDTCPRAYHLVCLEPELDEPPEGKWSCPHC 421
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 35/46 (76%)
Query: 11 HQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
HQ++C VC+ GGE++ CD+CP AYH CL+P LD P+G W CPRC
Sbjct: 436 HQEFCRVCKDGGELLCCDSCPSAYHTFCLNPPLDTIPDGDWRCPRC 481
>sp|Q8TDI0|CHD5_HUMAN Chromodomain-helicase-DNA-binding protein 5 OS=Homo sapiens GN=CHD5
PE=2 SV=1
Length = 1954
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 43/53 (81%), Positives = 48/53 (90%)
Query: 8 QTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDG 60
+T+HQDYCEVCQQGGEIILCDTCPRAYHL CLDPEL++ PEGKWSCP C +G
Sbjct: 339 ETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEG 391
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 34/47 (72%)
Query: 11 HQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCV 57
H ++C VC+ GGE++ CD CP +YHL CL+P L E P G+W CPRC
Sbjct: 415 HMEFCRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCT 461
>sp|Q14839|CHD4_HUMAN Chromodomain-helicase-DNA-binding protein 4 OS=Homo sapiens GN=CHD4
PE=1 SV=2
Length = 1912
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 40/60 (66%), Positives = 51/60 (85%)
Query: 1 MSHIQDLQTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDG 60
++ + +T+HQDYCEVCQQGGEIILCDTCPRAYH+ CLDP++++ PEGKWSCP C +G
Sbjct: 359 VTAVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEG 418
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 35/47 (74%)
Query: 11 HQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCV 57
H ++C VC+ GGE++ CDTCP +YH+ CL+P L E P G+W CPRC
Sbjct: 448 HMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 494
>sp|Q6PDQ2|CHD4_MOUSE Chromodomain-helicase-DNA-binding protein 4 OS=Mus musculus GN=Chd4
PE=1 SV=1
Length = 1915
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 40/60 (66%), Positives = 51/60 (85%)
Query: 1 MSHIQDLQTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDG 60
++ + +T+HQDYCEVCQQGGEIILCDTCPRAYH+ CLDP++++ PEGKWSCP C +G
Sbjct: 352 VTAVDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEG 411
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 35/47 (74%)
Query: 11 HQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCV 57
H ++C VC+ GGE++ CDTCP +YH+ CL+P L E P G+W CPRC
Sbjct: 441 HMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCT 487
>sp|G5EBZ4|LE418_CAEEL Protein let-418 OS=Caenorhabditis elegans GN=let-418 PE=1 SV=1
Length = 1829
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 45/67 (67%)
Query: 8 QTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASP 67
+ E+ DYCE C+Q GE++LCDTCPRAYH C+D ++E PEG WSC C+ GP
Sbjct: 252 EAENNDYCEECKQDGELLLCDTCPRAYHTVCIDENMEEPPEGDWSCAHCIEHGPEVVKEE 311
Query: 68 PAEEVKE 74
PA++ E
Sbjct: 312 PAKQNDE 318
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 44/71 (61%), Gaps = 10/71 (14%)
Query: 10 EHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETP-EGKWSCPRCVSDGPPETASPP 68
++ ++C++C++ ++LCD+C ++H C+DP L E P E WSCPRC ET P
Sbjct: 315 QNDEFCKICKETENLLLCDSCVCSFHAYCIDPPLTEVPKEETWSCPRC------ETVKP- 367
Query: 69 AEEVKEKEVLC 79
E K +++LC
Sbjct: 368 --EHKIEKILC 376
>sp|Q22516|CHD3_CAEEL Chromodomain-helicase-DNA-binding protein 3 homolog
OS=Caenorhabditis elegans GN=chd-3 PE=2 SV=2
Length = 1787
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 40/55 (72%)
Query: 7 LQTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGP 61
++ HQ+ CEVC Q GE++LCDTC RAYH+ C+D +++ PEG WSCP C GP
Sbjct: 260 VEENHQENCEVCNQDGELMLCDTCTRAYHVACIDENMEQPPEGDWSCPHCEEHGP 314
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 11 HQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPE 63
+ DYC +C++ I+LCDTCP +YH C+DP L E PEG+WSCPRC+ P +
Sbjct: 327 NMDYCRICKETSNILLCDTCPSSYHAYCIDPPLTEIPEGEWSCPRCIIPEPAQ 379
>sp|Q96BD5|PF21A_HUMAN PHD finger protein 21A OS=Homo sapiens GN=PHF21A PE=1 SV=1
Length = 680
Score = 73.2 bits (178), Expect = 5e-13, Method: Composition-based stats.
Identities = 26/46 (56%), Positives = 35/46 (76%)
Query: 11 HQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
H+D+C VC++ G++++CDTC R YHL CLDP L P+G W CPRC
Sbjct: 487 HEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRC 532
>sp|Q6ZPK0|PF21A_MOUSE PHD finger protein 21A OS=Mus musculus GN=Phf21a PE=1 SV=2
Length = 659
Score = 71.2 bits (173), Expect = 2e-12, Method: Composition-based stats.
Identities = 25/46 (54%), Positives = 35/46 (76%)
Query: 11 HQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
H+D+C VC++ G++++CDTC R YHL CL+P L P+G W CPRC
Sbjct: 467 HEDFCSVCRKSGQLLMCDTCSRVYHLDCLEPPLKTIPKGMWICPRC 512
>sp|O16102|CHD3_DROME Chromodomain-helicase-DNA-binding protein 3 OS=Drosophila
melanogaster GN=Chd3 PE=2 SV=3
Length = 892
Score = 69.7 bits (169), Expect = 5e-12, Method: Composition-based stats.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 12 QDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCV 57
++YC+VC GG+++ CD+CP YH CL P L P+G W CPRC+
Sbjct: 35 EEYCKVCSDGGDLLCCDSCPSVYHRTCLSPPLKSIPKGDWICPRCI 80
>sp|O43918|AIRE_HUMAN Autoimmune regulator OS=Homo sapiens GN=AIRE PE=1 SV=1
Length = 545
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 34/51 (66%)
Query: 7 LQTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCV 57
L +++D C VC+ GGE+I CD CPRA+HL CL P L E P G W C C+
Sbjct: 291 LHQKNEDECAVCRDGGELICCDGCPRAFHLACLSPPLREIPSGTWRCSSCL 341
>sp|Q04779|RCO1_YEAST Transcriptional regulatory protein RCO1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RCO1 PE=1 SV=1
Length = 684
Score = 64.7 bits (156), Expect = 2e-10, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 10 EHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDET--PEGKWSCPRC 56
E++D+C C Q G + CDTCP+++H CLDP +D P+G W C C
Sbjct: 258 ENEDFCSACNQSGSFLCCDTCPKSFHFLCLDPPIDPNNLPKGDWHCNEC 306
>sp|Q9Z0E3|AIRE_MOUSE Autoimmune regulator OS=Mus musculus GN=Aire PE=1 SV=1
Length = 552
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 33/51 (64%)
Query: 7 LQTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCV 57
+ +++D C VC GGE+I CD CPRA+HL CL P L E P G W C C+
Sbjct: 293 VNQKNEDECAVCHDGGELICCDGCPRAFHLACLSPPLQEIPSGLWRCSCCL 343
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 22/53 (41%)
Query: 15 CEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASP 67
C VC G E++ C C A+H C P P C C +D P +P
Sbjct: 434 CSVCGDGTEVLRCAHCAAAFHWRCHFPTAAARPGTNLRCKSCSADSTPTPGTP 486
>sp|Q96EK2|PF21B_HUMAN PHD finger protein 21B OS=Homo sapiens GN=PHF21B PE=2 SV=1
Length = 531
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 30/46 (65%)
Query: 11 HQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
H ++C C++G + C TCP AYHL CL+P L P+G W CPRC
Sbjct: 351 HDEHCAACKRGANLQPCGTCPGAYHLSCLEPPLKTAPKGVWVCPRC 396
>sp|Q6E2N3|TRI33_DANRE E3 ubiquitin-protein ligase TRIM33 OS=Danio rerio GN=trim33 PE=2
SV=1
Length = 1163
Score = 61.6 bits (148), Expect = 1e-09, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 33/53 (62%)
Query: 11 HQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPE 63
++D+C VCQ GGE++ CD CP+ +H+ C P L +P G W C C + PE
Sbjct: 920 NEDWCAVCQNGGELLCCDHCPKVFHITCHIPTLKSSPSGDWMCTFCRNLANPE 972
>sp|Q12830|BPTF_HUMAN Nucleosome-remodeling factor subunit BPTF OS=Homo sapiens GN=BPTF
PE=1 SV=3
Length = 3046
Score = 60.8 bits (146), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 10 EHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASPPA 69
++ D+C VC + G+++ C+TC YHL C+ P L+E PE +W C CV+ P A
Sbjct: 388 QYDDHCRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVCVAHKVPGVTDCVA 447
Query: 70 EEVKEK 75
E K K
Sbjct: 448 EIQKNK 453
>sp|Q8C966|PF21B_MOUSE PHD finger protein 21B OS=Mus musculus GN=Phf21b PE=2 SV=1
Length = 487
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 29/46 (63%)
Query: 11 HQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
H ++C C++G + C TC AYHL CLDP L P+G W CP+C
Sbjct: 306 HDEFCAACKRGASLQPCGTCSGAYHLSCLDPPLKTPPKGLWVCPKC 351
>sp|Q924W6|TRI66_MOUSE Tripartite motif-containing protein 66 OS=Mus musculus GN=Trim66 PE=1
SV=3
Length = 1242
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 33/54 (61%)
Query: 10 EHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPE 63
E++D+C VC GGE++ CD CP+ YHL C P L P G+W C C S PE
Sbjct: 994 ENEDFCAVCINGGELLCCDRCPKVYHLSCHVPALLSFPGGEWVCTLCRSLTQPE 1047
>sp|O15016|TRI66_HUMAN Tripartite motif-containing protein 66 OS=Homo sapiens GN=TRIM66 PE=2
SV=4
Length = 1216
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 33/54 (61%)
Query: 10 EHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPE 63
E++D+C VC GGE++ CD CP+ +HL C P L P G+W C C S PE
Sbjct: 968 ENEDFCAVCLNGGELLCCDRCPKVFHLSCHVPALLSFPGGEWVCTLCRSLTQPE 1021
>sp|Q9UPN9|TRI33_HUMAN E3 ubiquitin-protein ligase TRIM33 OS=Homo sapiens GN=TRIM33 PE=1
SV=3
Length = 1127
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%)
Query: 11 HQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPET 64
++D+C VCQ GG+++ C+ CP+ +HL C P L P G W C C G PE
Sbjct: 886 NEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDIGKPEV 939
>sp|Q9W0T1|NU301_DROME Nucleosome-remodeling factor subunit NURF301 OS=Drosophila
melanogaster GN=E(bx) PE=1 SV=2
Length = 2669
Score = 58.5 bits (140), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%)
Query: 4 IQDLQTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVS 58
+Q+ + D+C VC + G+++ C+TCP YHL C+DP +++ P W C C S
Sbjct: 331 LQEGPIHYDDHCRVCHRLGDLLCCETCPAVYHLECVDPPMNDVPTEDWQCGLCRS 385
>sp|Q64127|TIF1A_MOUSE Transcription intermediary factor 1-alpha OS=Mus musculus GN=Trim24
PE=1 SV=1
Length = 1051
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%)
Query: 11 HQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPET 64
++D+C VCQ GGE++ C+ CP+ +HL C P L P G+W C C PE
Sbjct: 826 NEDWCAVCQNGGELLCCEKCPKVFHLTCHVPTLTNFPSGEWICTFCRDLSKPEV 879
>sp|Q9UIG0|BAZ1B_HUMAN Tyrosine-protein kinase BAZ1B OS=Homo sapiens GN=BAZ1B PE=1 SV=2
Length = 1483
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 32/45 (71%), Gaps = 3/45 (6%)
Query: 15 CEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
C+VC++ GE +ILCD C +A+HL CL P L E P+G+W CP C
Sbjct: 1187 CKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPAC 1231
>sp|O15164|TIF1A_HUMAN Transcription intermediary factor 1-alpha OS=Homo sapiens GN=TRIM24
PE=1 SV=3
Length = 1050
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%)
Query: 11 HQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPET 64
++D+C VCQ GGE++ C+ CP+ +HL C P L P G+W C C PE
Sbjct: 825 NEDWCAVCQNGGELLCCEKCPKVFHLSCHVPTLTNFPSGEWICTFCRDLSKPEV 878
>sp|Q6P2L6|NSD3_MOUSE Histone-lysine N-methyltransferase NSD3 OS=Mus musculus GN=Whsc1l1
PE=1 SV=2
Length = 1439
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 32/46 (69%), Gaps = 4/46 (8%)
Query: 11 HQDYCEVCQQGGEIILCDT--CPRAYHLCCLDPELDETPEGKWSCP 54
H+DYC C GGE+++CD CP+AYHL CL+ L + P GKW CP
Sbjct: 1322 HEDYCFQCGDGGELVMCDKKDCPKAYHLLCLN--LTQPPHGKWECP 1365
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 26/39 (66%), Gaps = 3/39 (7%)
Query: 18 CQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
C++GG ++ C++CP ++H CL ++ PEG W+C C
Sbjct: 917 CEKGGRLLCCESCPASFHPECLSIDM---PEGCWNCNDC 952
>sp|Q99PP7|TRI33_MOUSE E3 ubiquitin-protein ligase TRIM33 OS=Mus musculus GN=Trim33 PE=1
SV=2
Length = 1142
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%)
Query: 11 HQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPET 64
++D+C VCQ GG+++ C+ CP+ +HL C P L P G W C C G PE
Sbjct: 901 NEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDIGKPEV 954
>sp|Q9Z277|BAZ1B_MOUSE Tyrosine-protein kinase BAZ1B OS=Mus musculus GN=Baz1b PE=1 SV=2
Length = 1479
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 32/45 (71%), Gaps = 3/45 (6%)
Query: 15 CEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
C+VC++ GE +ILCD C +A+HL CL P L E P+G+W CP C
Sbjct: 1187 CKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPAC 1231
>sp|Q9BZ95|NSD3_HUMAN Histone-lysine N-methyltransferase NSD3 OS=Homo sapiens GN=WHSC1L1
PE=1 SV=1
Length = 1437
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 32/46 (69%), Gaps = 4/46 (8%)
Query: 11 HQDYCEVCQQGGEIILCDT--CPRAYHLCCLDPELDETPEGKWSCP 54
H+DYC C GGE+++CD CP+AYHL CL+ L + P GKW CP
Sbjct: 1320 HEDYCFQCGDGGELVMCDKKDCPKAYHLLCLN--LTQPPYGKWECP 1363
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 3/39 (7%)
Query: 18 CQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
C++GG ++ C++CP ++H CL E+ PEG W+C C
Sbjct: 917 CEKGGRLLCCESCPASFHPECLSIEM---PEGCWNCNDC 952
>sp|Q56R14|TRI33_XENLA E3 ubiquitin-protein ligase TRIM33 OS=Xenopus laevis GN=trim33 PE=1
SV=1
Length = 1091
Score = 57.4 bits (137), Expect = 3e-08, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 11 HQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPE 63
++D+C VCQ GG+++ C+ CP+ +HL C P L P G+W C C PE
Sbjct: 849 NEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGEWICTFCRDLNKPE 901
>sp|A8DZJ1|BAZ1B_XENLA Tyrosine-protein kinase BAZ1B OS=Xenopus laevis GN=baz1b PE=2 SV=2
Length = 1441
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 36/54 (66%), Gaps = 4/54 (7%)
Query: 6 DLQTEHQDYCEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
D+ +E+ C+VC++ GE +ILCD C +A+HL CL P L P+G+W CP C
Sbjct: 1146 DMSSENA-RCKVCRKKGEDDKLILCDECNKAFHLFCLRPVLFNIPDGEWLCPAC 1198
>sp|Q62240|KDM5D_MOUSE Lysine-specific demethylase 5D OS=Mus musculus GN=Kdm5d PE=2 SV=2
Length = 1548
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 32/56 (57%), Gaps = 6/56 (10%)
Query: 15 CEVCQQGGEI---ILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVS---DGPPET 64
C +C +G E+ +LCD C YH+ CL P L E P+G W CP+C+ PPE
Sbjct: 326 CRICSRGDEVDKFLLCDGCSDNYHIFCLLPPLSEVPKGVWRCPKCILAECKSPPEA 381
>sp|A2BIL7|BAZ1B_DANRE Tyrosine-protein kinase BAZ1B OS=Danio rerio GN=baz1b PE=1 SV=2
Length = 1536
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
Query: 15 CEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
C+VC++ GE +ILCD C +A+HL CL P L P G+W CP C
Sbjct: 1205 CKVCRRKGEDDKLILCDECNKAFHLFCLRPALYRIPAGEWLCPAC 1249
>sp|Q96QT6|PHF12_HUMAN PHD finger protein 12 OS=Homo sapiens GN=PHF12 PE=1 SV=2
Length = 1004
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Query: 11 HQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDE--TPEGKWSCPRCV 57
+ D C+ C++GG+++ CD CP A+HL C +P L E P G+W C RC
Sbjct: 55 NHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCT 103
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 24 IILCDTCPRAYHLCCLDPELDETPEGKWSCPRCV 57
+I CD CP +H+ CL+P L P G+W CP +
Sbjct: 286 LIQCDYCPLLFHMDCLEPPLTAMPLGRWMCPNHI 319
>sp|Q5SPL2|PHF12_MOUSE PHD finger protein 12 OS=Mus musculus GN=Phf12 PE=2 SV=1
Length = 1003
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Query: 11 HQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDE--TPEGKWSCPRCV 57
+ D C+ C++GG+++ CD CP A+HL C +P L E P G+W C RC
Sbjct: 55 NHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCT 103
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 24 IILCDTCPRAYHLCCLDPELDETPEGKWSCPRCV 57
+I CD CP +H+ CL+P L P G+W CP +
Sbjct: 286 LIQCDYCPLLFHMDCLEPPLTAMPLGRWMCPNHI 319
>sp|P47156|JHD2_YEAST Histone demethylase JHD2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=JHD2 PE=1 SV=1
Length = 728
Score = 53.1 bits (126), Expect = 5e-07, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 6 DLQTEHQDYCEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGKWSCPRCV 57
D + + D C VC++ + ILCD+C + +H+ CL P L+ P G W C C+
Sbjct: 229 DFEEDDDDACIVCRKTNDPKRTILCDSCDKPFHIYCLSPPLERVPSGDWICNTCI 283
>sp|Q8UVR5|BAZ1A_XENLA Bromodomain adjacent to zinc finger domain protein 1A (Fragment)
OS=Xenopus laevis GN=baz1a PE=2 SV=1
Length = 627
Score = 52.8 bits (125), Expect = 6e-07, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
Query: 15 CEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
C+VC++ G+ ++LCD C R +H+ C+ P+L PEG W CP C
Sbjct: 225 CKVCRKKGDGESMVLCDGCDRGHHIYCVRPKLKYVPEGDWFCPEC 269
>sp|Q09698|YA27_SCHPO Uncharacterized protein C2F7.07c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC2F7.07c PE=4 SV=1
Length = 607
Score = 52.4 bits (124), Expect = 9e-07, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 11 HQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDET--PEGKWSCPRC 56
+ DYC C G + C+TCP ++H C+DP ++E P+ W C C
Sbjct: 262 NNDYCSACHGPGNFLCCETCPNSFHFTCIDPPIEEKNLPDDAWYCNEC 309
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 21/51 (41%), Gaps = 2/51 (3%)
Query: 24 IILCDTCPRAYHLCCLDPELDETPEG--KWSCPRCVSDGPPETASPPAEEV 72
I+ CD C +H CL+P L P KW CP P P +V
Sbjct: 422 ILACDYCNSYWHPDCLNPPLATLPSNLRKWKCPNHSDHVTPRYRLPEKAKV 472
>sp|Q30DN6|KDM5D_CANFA Lysine-specific demethylase 5D OS=Canis familiaris GN=KDM5D PE=2
SV=1
Length = 1545
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Query: 15 CEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVS---DGPPET 64
C +C +G E ++LCD C YH+ CL P L E P G W CP+C+ PPE
Sbjct: 320 CRICSRGDEDDKLLLCDGCDDTYHIFCLIPPLPEIPRGVWRCPKCIMAECKRPPEA 375
>sp|Q9VMJ7|KDM5_DROME Lysine-specific demethylase lid OS=Drosophila melanogaster GN=lid
PE=1 SV=1
Length = 1838
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Query: 15 CEVCQQGG---EIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCV 57
C +C +G ++LCD C +YH CL P L P+G+W CPRCV
Sbjct: 451 CHICNRGDVEESMLLCDGCDDSYHTFCLLPPLTSIPKGEWLCPRCV 496
>sp|P41230|KDM5C_MOUSE Lysine-specific demethylase 5C OS=Mus musculus GN=Kdm5c PE=2 SV=4
Length = 1554
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
Query: 15 CEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGKWSCPRCV 57
C +C +G E ++LCD C YH+ CL P L E P+G W CP+CV
Sbjct: 327 CRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWRCPKCV 372
>sp|P41229|KDM5C_HUMAN Lysine-specific demethylase 5C OS=Homo sapiens GN=KDM5C PE=1 SV=2
Length = 1560
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
Query: 15 CEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGKWSCPRCV 57
C +C +G E ++LCD C YH+ CL P L E P+G W CP+CV
Sbjct: 327 CRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWRCPKCV 372
>sp|Q9P1Y6|PHRF1_HUMAN PHD and RING finger domain-containing protein 1 OS=Homo sapiens
GN=PHRF1 PE=1 SV=3
Length = 1649
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 10 EHQDYCEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDG 60
E +CEVC + ++LCD C YH+ CLDP L E P +W CP C + G
Sbjct: 181 EDPTFCEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQEVPVDEWFCPECAAPG 234
>sp|Q38JA7|KDM5C_CANFA Lysine-specific demethylase 5C OS=Canis familiaris GN=KDM5C PE=2
SV=1
Length = 1556
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
Query: 15 CEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGKWSCPRCV 57
C +C +G E ++LCD C YH+ CL P L E P+G W CP+CV
Sbjct: 327 CRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWRCPKCV 372
>sp|A1YVX4|KDM5C_PIG Lysine-specific demethylase 5C OS=Sus scrofa GN=KDM5C PE=2 SV=1
Length = 1516
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
Query: 15 CEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGKWSCPRCV 57
C +C +G E ++LCD C YH+ CL P L E P+G W CP+CV
Sbjct: 286 CRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWRCPKCV 331
>sp|Q9BY66|KDM5D_HUMAN Lysine-specific demethylase 5D OS=Homo sapiens GN=KDM5D PE=1 SV=2
Length = 1539
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Query: 15 CEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGKWSCPRCV 57
C+VC +G E ++ CD C YH+ CL P L E P G W CP+C+
Sbjct: 317 CQVCSRGDEDDKLLFCDGCDDNYHIFCLLPPLPEIPRGIWRCPKCI 362
>sp|Q5XUN4|KDM5D_PANTR Lysine-specific demethylase 5D OS=Pan troglodytes GN=KDM5D PE=2
SV=1
Length = 1535
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Query: 15 CEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGKWSCPRCV 57
C+VC +G E ++ CD C YH+ CL P L E P G W CP+C+
Sbjct: 317 CQVCSRGDEDDKLLFCDGCDDNYHIFCLLPPLPEIPRGIWRCPKCI 362
>sp|Q9ULU4|PKCB1_HUMAN Protein kinase C-binding protein 1 OS=Homo sapiens GN=ZMYND8 PE=1
SV=2
Length = 1186
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Query: 14 YCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
YC VC + G+++ C+ CPR YH CL L PEG W CP C
Sbjct: 90 YCWVCHREGQVLCCELCPRVYHAKCL--RLTSEPEGDWFCPEC 130
>sp|Q9NRL2|BAZ1A_HUMAN Bromodomain adjacent to zinc finger domain protein 1A OS=Homo sapiens
GN=BAZ1A PE=1 SV=2
Length = 1556
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
Query: 15 CEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
C++C++ G+ ++LCD C R +H C+ P+L PEG W CP C
Sbjct: 1151 CKICRKKGDAENMVLCDGCDRGHHTYCVRPKLKTVPEGDWFCPEC 1195
>sp|A6H619|PHRF1_MOUSE PHD and RING finger domain-containing protein 1 OS=Mus musculus
GN=Phrf1 PE=1 SV=2
Length = 1682
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 10 EHQDYCEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDG--PPET 64
E +CEVC + ++LCD C YH+ CLDP L E P +W CP C G P
Sbjct: 183 EDPTFCEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQEVPVDEWFCPECTVPGVDPTHD 242
Query: 65 ASPPAEE 71
A+P ++E
Sbjct: 243 AAPVSDE 249
>sp|Q9SGH2|MBD9_ARATH Methyl-CpG-binding domain-containing protein 9 OS=Arabidopsis
thaliana GN=MBD9 PE=2 SV=1
Length = 2176
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 25/43 (58%)
Query: 15 CEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCV 57
C V + ++LCDTC YH CL+P L P+G W CP CV
Sbjct: 1293 CGVDKDDDSVLLCDTCDAEYHTYCLNPPLIRIPDGNWYCPSCV 1335
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 21/37 (56%)
Query: 24 IILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDG 60
+++CD C R +H+ C++ ++ P W C C + G
Sbjct: 98 VVVCDACERGFHMSCVNDGVEAAPSADWMCSDCRTGG 134
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.137 0.438
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,883,967
Number of Sequences: 539616
Number of extensions: 2602113
Number of successful extensions: 10960
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 167
Number of HSP's successfully gapped in prelim test: 173
Number of HSP's that attempted gapping in prelim test: 10514
Number of HSP's gapped (non-prelim): 558
length of query: 139
length of database: 191,569,459
effective HSP length: 104
effective length of query: 35
effective length of database: 135,449,395
effective search space: 4740728825
effective search space used: 4740728825
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)