Query psy14605
Match_columns 139
No_of_seqs 201 out of 1179
Neff 6.5
Searched_HMMs 29240
Date Fri Aug 16 16:00:37 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14605.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14605hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1fp0_A KAP-1 corepressor; PHD 99.7 1.1E-18 3.8E-23 119.0 5.7 60 1-60 14-73 (88)
2 2l5u_A Chromodomain-helicase-D 99.7 2.6E-18 9E-23 109.6 3.8 59 3-61 2-60 (61)
3 1xwh_A Autoimmune regulator; P 99.7 5.1E-18 1.7E-22 109.7 3.5 56 8-63 4-59 (66)
4 1mm2_A MI2-beta; PHD, zinc fin 99.7 1.1E-17 3.9E-22 106.6 4.3 54 8-61 5-58 (61)
5 2yql_A PHD finger protein 21A; 99.7 1.9E-17 6.6E-22 103.7 3.0 52 7-58 4-55 (56)
6 2lri_C Autoimmune regulator; Z 99.7 5.7E-17 2E-21 105.0 3.9 52 9-60 9-60 (66)
7 2puy_A PHD finger protein 21A; 99.6 4.5E-17 1.6E-21 103.3 2.4 50 10-59 3-52 (60)
8 3u5n_A E3 ubiquitin-protein li 99.6 4.2E-16 1.4E-20 120.1 4.0 55 8-62 3-57 (207)
9 1wev_A Riken cDNA 1110020M19; 99.6 3.3E-16 1.1E-20 106.5 1.8 57 4-60 8-73 (88)
10 3o36_A Transcription intermedi 99.6 9.4E-16 3.2E-20 116.1 4.2 52 10-61 2-53 (184)
11 1f62_A Transcription factor WS 99.6 8E-16 2.7E-20 94.3 2.7 45 14-58 2-49 (51)
12 2e6r_A Jumonji/ARID domain-con 99.6 9.5E-16 3.2E-20 105.1 2.9 53 7-59 11-66 (92)
13 2yt5_A Metal-response element- 99.5 9.7E-16 3.3E-20 98.5 1.8 54 8-61 2-63 (66)
14 3asl_A E3 ubiquitin-protein li 99.5 9E-15 3.1E-19 95.6 3.5 46 14-59 20-69 (70)
15 2e6s_A E3 ubiquitin-protein li 99.5 1.3E-14 4.5E-19 96.5 3.5 46 13-58 27-76 (77)
16 2l43_A N-teminal domain from h 99.5 8.3E-15 2.8E-19 99.7 2.3 51 9-61 22-77 (88)
17 2ro1_A Transcription intermedi 99.5 1.4E-14 4.7E-19 110.6 3.7 49 12-60 2-50 (189)
18 2ku3_A Bromodomain-containing 99.5 3.6E-15 1.2E-19 97.8 0.2 51 8-60 12-67 (71)
19 3shb_A E3 ubiquitin-protein li 99.4 1.1E-13 3.8E-18 92.0 3.3 45 14-58 28-76 (77)
20 2k16_A Transcription initiatio 99.4 6.3E-14 2.1E-18 92.1 1.9 56 5-60 11-69 (75)
21 4gne_A Histone-lysine N-methyl 99.4 1.4E-13 4.9E-18 96.7 3.4 51 7-59 10-62 (107)
22 3v43_A Histone acetyltransfera 99.4 2.9E-13 1E-17 95.3 3.7 45 14-58 63-111 (112)
23 3ask_A E3 ubiquitin-protein li 99.3 3.7E-13 1.3E-17 105.5 3.2 47 12-58 174-224 (226)
24 2kwj_A Zinc finger protein DPF 99.3 3.1E-13 1.1E-17 95.6 2.2 46 14-59 60-108 (114)
25 2lbm_A Transcriptional regulat 99.3 2.3E-13 7.9E-18 100.0 1.0 52 8-59 59-117 (142)
26 2ysm_A Myeloid/lymphoid or mix 99.3 1.1E-12 3.9E-17 91.8 3.4 47 14-60 56-105 (111)
27 1wen_A Inhibitor of growth fam 99.3 5.4E-12 1.9E-16 82.5 5.0 50 9-61 13-67 (71)
28 2vnf_A ING 4, P29ING4, inhibit 99.2 1.7E-12 5.7E-17 82.3 1.8 50 7-59 5-59 (60)
29 3c6w_A P28ING5, inhibitor of g 99.2 1.8E-12 6.2E-17 82.0 1.9 49 8-59 5-58 (59)
30 1weu_A Inhibitor of growth fam 99.2 1.6E-11 5.4E-16 84.0 5.2 51 8-61 32-87 (91)
31 2g6q_A Inhibitor of growth pro 99.2 3.9E-12 1.3E-16 81.2 2.0 50 7-59 6-60 (62)
32 2ysm_A Myeloid/lymphoid or mix 99.2 1.6E-11 5.5E-16 85.9 3.9 50 8-57 3-55 (111)
33 2lv9_A Histone-lysine N-methyl 99.2 2.9E-11 1E-15 83.4 4.7 45 13-59 29-76 (98)
34 3ql9_A Transcriptional regulat 99.1 2.4E-12 8.1E-17 93.2 -2.1 52 8-59 53-111 (129)
35 2jmi_A Protein YNG1, ING1 homo 99.1 4.7E-11 1.6E-15 81.5 2.5 48 8-58 22-75 (90)
36 1x4i_A Inhibitor of growth pro 98.8 9.6E-10 3.3E-14 71.6 1.3 48 9-59 3-55 (70)
37 1we9_A PHD finger family prote 98.7 3.2E-09 1.1E-13 67.3 2.3 53 9-61 3-60 (64)
38 1wee_A PHD finger family prote 98.7 6.3E-09 2.2E-13 67.6 3.0 54 8-62 12-69 (72)
39 1wew_A DNA-binding family prot 98.6 1E-08 3.4E-13 67.8 2.2 54 8-62 12-75 (78)
40 2xb1_A Pygopus homolog 2, B-ce 98.6 6.3E-09 2.2E-13 72.5 1.0 49 12-62 3-64 (105)
41 3o70_A PHD finger protein 13; 98.6 1.6E-08 5.6E-13 65.3 2.8 48 10-59 17-67 (68)
42 2kwj_A Zinc finger protein DPF 98.6 3.4E-09 1.2E-13 74.6 -0.6 45 13-57 2-59 (114)
43 2rsd_A E3 SUMO-protein ligase 98.5 2.3E-08 8E-13 64.3 2.1 54 5-59 3-65 (68)
44 2ri7_A Nucleosome-remodeling f 98.5 5.3E-09 1.8E-13 77.9 -1.3 51 9-60 5-60 (174)
45 2vpb_A Hpygo1, pygopus homolog 98.5 1.1E-08 3.9E-13 65.5 -0.4 48 9-58 5-65 (65)
46 1wem_A Death associated transc 98.5 1.8E-08 6.3E-13 66.0 -0.0 51 11-62 15-73 (76)
47 1wil_A KIAA1045 protein; ring 98.4 7.2E-08 2.5E-12 64.8 1.9 58 5-62 8-79 (89)
48 3v43_A Histone acetyltransfera 98.4 1.7E-08 5.9E-13 70.7 -1.5 47 11-57 4-62 (112)
49 1wep_A PHF8; structural genomi 98.4 7.2E-08 2.5E-12 63.6 1.3 52 10-62 10-66 (79)
50 3o7a_A PHD finger protein 13 v 98.4 1.1E-07 3.7E-12 58.1 1.7 44 13-58 5-51 (52)
51 3kqi_A GRC5, PHD finger protei 98.3 1.2E-07 4.1E-12 62.0 0.5 52 10-62 8-64 (75)
52 2kgg_A Histone demethylase jar 98.2 1.1E-07 3.8E-12 58.1 -0.7 44 14-57 4-52 (52)
53 3lqh_A Histone-lysine N-methyl 97.8 3.6E-06 1.2E-10 63.9 0.5 50 13-62 3-66 (183)
54 3kv5_D JMJC domain-containing 97.6 4.7E-06 1.6E-10 71.5 -1.4 49 10-59 35-88 (488)
55 3pur_A Lysine-specific demethy 97.5 1.7E-05 5.7E-10 68.7 1.0 37 23-59 57-94 (528)
56 3kv4_A PHD finger protein 8; e 97.3 1.5E-05 5E-10 67.9 -2.2 48 13-61 6-58 (447)
57 3a1b_A DNA (cytosine-5)-methyl 97.2 5.8E-05 2E-09 56.1 0.2 53 8-60 75-135 (159)
58 4bbq_A Lysine-specific demethy 97.1 0.00016 5.6E-09 50.1 1.9 38 23-60 74-115 (117)
59 2pv0_B DNA (cytosine-5)-methyl 96.6 0.0004 1.4E-08 58.0 0.3 53 8-60 89-149 (386)
60 4gne_A Histone-lysine N-methyl 96.2 0.0019 6.6E-08 44.8 2.1 44 9-53 50-98 (107)
61 2ku7_A MLL1 PHD3-CYP33 RRM chi 96.0 0.0025 8.6E-08 44.0 1.7 38 23-60 1-45 (140)
62 3rsn_A SET1/ASH2 histone methy 95.9 0.0061 2.1E-07 45.9 3.6 47 13-60 6-60 (177)
63 2kiz_A E3 ubiquitin-protein li 88.8 0.087 3E-06 32.2 0.2 48 9-60 11-61 (69)
64 1iym_A EL5; ring-H2 finger, ub 88.3 0.17 5.9E-06 29.3 1.3 45 11-59 4-52 (55)
65 4bbq_A Lysine-specific demethy 86.7 0.1 3.6E-06 35.6 -0.4 35 13-58 8-42 (117)
66 2lq6_A Bromodomain-containing 85.7 0.33 1.1E-05 32.0 1.6 31 10-40 15-49 (87)
67 1vyx_A ORF K3, K3RING; zinc-bi 85.4 0.044 1.5E-06 33.7 -2.6 49 10-60 4-57 (60)
68 2ect_A Ring finger protein 126 85.1 0.62 2.1E-05 28.9 2.7 49 9-61 12-63 (78)
69 2l0b_A E3 ubiquitin-protein li 85.0 0.18 6.2E-06 32.8 0.1 47 10-60 38-87 (91)
70 2ct0_A Non-SMC element 1 homol 84.9 0.4 1.4E-05 30.8 1.7 48 10-59 13-61 (74)
71 1x4j_A Ring finger protein 38; 84.9 0.14 4.8E-06 31.9 -0.5 48 10-61 21-71 (75)
72 1weq_A PHD finger protein 7; s 84.1 1.1 3.8E-05 29.6 3.7 36 23-61 45-81 (85)
73 2ecl_A Ring-box protein 2; RNF 80.3 0.4 1.4E-05 30.5 0.3 45 11-59 14-73 (81)
74 2d8s_A Cellular modulator of i 80.2 0.26 8.8E-06 31.9 -0.6 51 10-62 13-70 (80)
75 2d8t_A Dactylidin, ring finger 79.6 0.59 2E-05 28.6 1.0 47 9-60 12-59 (71)
76 1v87_A Deltex protein 2; ring- 79.4 0.29 1E-05 32.7 -0.6 51 11-61 24-93 (114)
77 2ecm_A Ring finger and CHY zin 78.0 0.22 7.5E-06 28.8 -1.4 45 11-59 4-52 (55)
78 3nw0_A Non-structural maintena 77.0 0.64 2.2E-05 36.0 0.6 47 11-59 179-226 (238)
79 1bor_A Transcription factor PM 74.3 4.4 0.00015 23.5 3.9 45 10-61 4-48 (56)
80 2ep4_A Ring finger protein 24; 74.3 0.38 1.3E-05 29.6 -1.1 48 10-61 13-63 (74)
81 2yur_A Retinoblastoma-binding 72.6 1 3.6E-05 27.8 0.7 50 10-61 13-63 (74)
82 2ysl_A Tripartite motif-contai 71.8 2.2 7.4E-05 25.8 2.1 49 10-60 18-67 (73)
83 2ecy_A TNF receptor-associated 71.8 1.2 4.2E-05 26.6 0.9 46 10-60 13-60 (66)
84 3k1l_B Fancl; UBC, ring, RWD, 71.8 1.3 4.3E-05 36.8 1.2 50 10-59 306-370 (381)
85 4a0k_B E3 ubiquitin-protein li 71.6 0.86 2.9E-05 31.6 0.1 27 29-59 83-109 (117)
86 2ct2_A Tripartite motif protei 70.6 0.71 2.4E-05 29.0 -0.4 53 8-61 11-67 (88)
87 2csy_A Zinc finger protein 183 69.7 0.61 2.1E-05 29.3 -0.9 47 10-60 13-59 (81)
88 2ecw_A Tripartite motif-contai 68.9 0.83 2.8E-05 28.3 -0.4 51 10-61 17-70 (85)
89 3ng2_A RNF4, snurf, ring finge 68.2 0.82 2.8E-05 27.6 -0.5 50 8-61 6-62 (71)
90 2egp_A Tripartite motif-contai 67.8 5 0.00017 24.4 3.2 50 10-61 10-64 (79)
91 3dpl_R Ring-box protein 1; ubi 67.6 0.86 2.9E-05 30.9 -0.6 31 25-59 68-98 (106)
92 3l11_A E3 ubiquitin-protein li 67.1 3.5 0.00012 27.3 2.5 46 10-60 13-60 (115)
93 2ea6_A Ring finger protein 4; 65.8 0.78 2.7E-05 27.4 -1.0 46 10-59 13-65 (69)
94 3lrq_A E3 ubiquitin-protein li 64.9 0.58 2E-05 30.8 -1.9 47 11-60 21-68 (100)
95 2ecj_A Tripartite motif-contai 64.7 2.3 7.8E-05 24.4 1.0 44 10-56 13-58 (58)
96 2ecn_A Ring finger protein 141 64.3 1 3.5E-05 27.2 -0.7 47 10-61 13-59 (70)
97 1chc_A Equine herpes virus-1 r 63.0 0.65 2.2E-05 27.9 -1.7 46 11-60 4-50 (68)
98 4ayc_A E3 ubiquitin-protein li 62.7 1.3 4.5E-05 30.7 -0.4 44 12-59 53-96 (138)
99 2ckl_B Ubiquitin ligase protei 62.4 0.99 3.4E-05 32.2 -1.1 47 11-60 53-100 (165)
100 2kn9_A Rubredoxin; metalloprot 59.2 6 0.00021 25.8 2.4 11 49-59 59-69 (81)
101 2djb_A Polycomb group ring fin 59.2 2.1 7E-05 26.1 0.1 48 10-61 13-61 (72)
102 2k1p_A Zinc finger RAN-binding 58.3 6.2 0.00021 21.1 2.0 16 47-62 3-18 (33)
103 2xeu_A Ring finger protein 4; 55.5 1.3 4.5E-05 25.9 -1.3 45 12-60 3-54 (64)
104 1t1h_A Gspef-atpub14, armadill 54.0 2.1 7.3E-05 26.3 -0.5 47 10-61 6-54 (78)
105 2ecv_A Tripartite motif-contai 53.8 1.9 6.6E-05 26.5 -0.7 50 10-61 17-70 (85)
106 2ysj_A Tripartite motif-contai 53.7 1.5 5.1E-05 25.9 -1.2 44 10-56 18-63 (63)
107 2lk0_A RNA-binding protein 5; 53.5 3 0.0001 22.3 0.1 14 48-61 3-16 (32)
108 3fl2_A E3 ubiquitin-protein li 53.3 2.7 9.4E-05 28.3 -0.1 49 11-62 51-99 (124)
109 1v5n_A PDI-like hypothetical p 53.2 5.1 0.00018 26.2 1.3 30 13-42 48-79 (89)
110 2hf1_A Tetraacyldisaccharide-1 52.5 5 0.00017 25.2 1.1 22 13-34 9-36 (68)
111 2js4_A UPF0434 protein BB2007; 51.7 5.2 0.00018 25.2 1.1 24 12-35 8-37 (70)
112 2jr6_A UPF0434 protein NMA0874 51.4 5.1 0.00018 25.1 1.0 22 13-34 9-36 (68)
113 2pk7_A Uncharacterized protein 51.1 5.3 0.00018 25.1 1.1 22 13-34 9-36 (69)
114 2jny_A Uncharacterized BCR; st 51.1 5.4 0.00019 25.0 1.1 24 12-35 10-39 (67)
115 1e8j_A Rubredoxin; iron-sulfur 49.9 20 0.0007 21.1 3.5 11 49-59 35-45 (52)
116 2ckl_A Polycomb group ring fin 49.7 3.8 0.00013 26.9 0.2 48 10-61 13-61 (108)
117 1jm7_A BRCA1, breast cancer ty 49.1 5.6 0.00019 25.9 1.0 48 12-62 21-70 (112)
118 4ap4_A E3 ubiquitin ligase RNF 48.6 1.5 5.1E-05 29.4 -2.1 47 10-60 70-123 (133)
119 1jm7_B BARD1, BRCA1-associated 47.4 8.5 0.00029 25.6 1.7 43 12-60 22-65 (117)
120 2a20_A Regulating synaptic mem 44.7 3.3 0.00011 25.7 -0.7 50 9-58 6-59 (62)
121 2yqp_A Probable ATP-dependent 44.7 11 0.00037 23.1 1.7 24 2-25 9-32 (60)
122 1e4u_A Transcriptional repress 44.3 9.8 0.00034 23.9 1.6 49 10-62 9-62 (78)
123 1yk4_A Rubredoxin, RD; electro 44.1 11 0.00038 22.3 1.6 11 49-59 34-44 (52)
124 6rxn_A Rubredoxin; electron tr 43.8 12 0.0004 21.7 1.7 33 26-59 6-39 (46)
125 2fiy_A Protein FDHE homolog; F 43.6 10 0.00034 30.4 1.8 27 10-36 180-220 (309)
126 2zet_C Melanophilin; complex, 43.5 11 0.00037 27.2 1.9 47 10-59 66-117 (153)
127 4b2u_A S67; toxin, ICK; NMR {S 43.4 5 0.00017 21.7 0.0 13 48-60 16-28 (36)
128 2y43_A E3 ubiquitin-protein li 42.9 4 0.00014 26.3 -0.5 46 12-61 22-68 (99)
129 2lx0_A Membrane fusion protein 42.5 11 0.00036 19.9 1.2 18 120-137 5-22 (32)
130 1zbd_B Rabphilin-3A; G protein 38.8 10 0.00035 26.7 1.0 50 10-59 53-107 (134)
131 1pft_A TFIIB, PFTFIIBN; N-term 37.6 22 0.00074 20.2 2.2 24 13-36 6-36 (50)
132 1weo_A Cellulose synthase, cat 37.5 5.2 0.00018 26.7 -0.6 48 10-60 14-68 (93)
133 2enn_A NPKC-theta, protein kin 36.3 16 0.00056 22.8 1.6 29 13-41 35-68 (77)
134 1faq_A RAF-1; transferase, ser 35.7 24 0.00081 20.0 2.2 28 13-40 15-43 (52)
135 1g25_A CDK-activating kinase a 35.6 7.9 0.00027 22.8 0.0 47 12-61 3-54 (65)
136 4cpa_I Metallocarboxypeptidase 35.4 21 0.00073 19.6 1.8 13 47-59 18-30 (38)
137 3ztg_A E3 ubiquitin-protein li 34.9 4.8 0.00016 25.4 -1.1 49 10-60 11-60 (92)
138 1z6u_A NP95-like ring finger p 34.6 5.1 0.00017 28.3 -1.1 48 12-62 78-125 (150)
139 2enz_A NPKC-theta, protein kin 34.0 22 0.00075 21.3 1.9 28 13-40 24-56 (65)
140 4b2v_A S64; toxin, ICK; NMR {S 33.2 21 0.00072 18.7 1.4 12 48-59 16-27 (32)
141 1n0z_A ZNF265; zinc finger, RN 32.3 43 0.0015 19.0 2.9 17 46-62 10-28 (45)
142 2yuu_A NPKC-delta, protein kin 32.0 22 0.00077 22.4 1.8 28 13-40 29-61 (83)
143 1ptq_A Protein kinase C delta 31.9 16 0.00056 20.5 1.0 29 12-40 11-44 (50)
144 2co8_A NEDD9 interacting prote 30.7 74 0.0025 19.4 4.2 48 10-59 13-74 (82)
145 2kpi_A Uncharacterized protein 30.3 23 0.00078 21.1 1.5 25 12-36 10-40 (56)
146 2drn_C 24-residues peptide fro 30.0 37 0.0013 17.2 2.0 13 122-134 4-16 (26)
147 1dx8_A Rubredoxin; electron tr 29.6 40 0.0014 21.0 2.6 11 49-59 39-49 (70)
148 4ic3_A E3 ubiquitin-protein li 29.3 29 0.00099 21.0 1.9 40 12-59 24-64 (74)
149 3uej_A NPKC-delta, protein kin 28.3 20 0.00068 21.5 1.0 29 12-40 20-53 (65)
150 2db6_A SH3 and cysteine rich d 28.3 19 0.00064 22.3 0.9 28 13-40 29-61 (74)
151 2eli_A Protein kinase C alpha 28.1 29 0.001 22.0 1.8 28 13-40 29-61 (85)
152 3hct_A TNF receptor-associated 28.1 5.2 0.00018 26.8 -2.0 47 10-60 16-63 (118)
153 2v3b_B Rubredoxin 2, rubredoxi 27.8 34 0.0012 20.3 2.0 11 49-59 35-45 (55)
154 2d9g_A YY1-associated factor 2 27.3 32 0.0011 20.3 1.8 15 46-60 7-21 (53)
155 1s24_A Rubredoxin 2; electron 26.0 36 0.0012 22.3 2.0 11 49-59 67-77 (87)
156 1zfo_A LAsp-1; LIM domain, zin 25.5 25 0.00084 18.1 0.9 24 13-38 4-30 (31)
157 1kbe_A Kinase suppressor of RA 25.1 24 0.00083 20.4 0.9 28 13-40 15-43 (49)
158 4rxn_A Rubredoxin; electron tr 24.2 35 0.0012 20.3 1.5 11 49-59 35-45 (54)
159 1y8f_A UNC-13 homolog A, MUNC1 23.6 28 0.00097 20.9 1.1 28 13-40 25-57 (66)
160 3j20_Y 30S ribosomal protein S 22.4 37 0.0013 19.7 1.4 8 13-20 20-27 (50)
161 2d8y_A Eplin protein; LIM doma 22.4 53 0.0018 20.4 2.3 33 5-39 8-43 (91)
162 2y1n_A E3 ubiquitin-protein li 22.1 9.3 0.00032 31.7 -1.9 44 13-59 333-376 (389)
163 2dj8_A Protein CBFA2T1; zinc f 21.9 57 0.002 19.1 2.2 22 11-33 14-35 (60)
164 3im4_C Dual specificity A kina 21.6 78 0.0027 18.1 2.6 16 114-130 12-27 (45)
165 1rmd_A RAG1; V(D)J recombinati 21.4 7.4 0.00025 25.7 -2.2 47 11-61 22-69 (116)
166 2fnf_X Putative RAS effector N 21.1 44 0.0015 20.6 1.6 28 13-40 36-65 (72)
167 3f6q_B LIM and senescent cell 21.1 28 0.00095 20.4 0.6 35 5-40 4-41 (72)
168 1qf8_A Casein kinase II; casei 20.4 30 0.001 25.6 0.8 34 29-62 108-146 (182)
169 2ebr_A Nuclear pore complex pr 20.3 93 0.0032 17.9 2.8 18 45-62 6-23 (47)
170 2vrw_B P95VAV, VAV1, proto-onc 20.3 43 0.0015 26.7 1.8 29 12-40 357-390 (406)
No 1
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=99.75 E-value=1.1e-18 Score=118.97 Aligned_cols=60 Identities=28% Similarity=0.738 Sum_probs=55.8
Q ss_pred CCCCCCCccccccccccccccCceEEeccCCCCCcccccCCCCCCCCCCCccccccccCC
Q psy14605 1 MSHIQDLQTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDG 60 (139)
Q Consensus 1 ~s~~d~~~~~~~~~C~vC~~~g~ll~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~~~ 60 (139)
||..+.+...++.+|.+|+++|+||+||.|+++||++|+.|++..+|.|+|+|+.|....
T Consensus 14 ~~~~~~~~d~n~~~C~vC~~~g~LL~CD~C~~~fH~~Cl~PpL~~~P~g~W~C~~C~~~~ 73 (88)
T 1fp0_A 14 IIDEFGTLDDSATICRVCQKPGDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVLP 73 (88)
T ss_dssp CCCCCCSSSSSSSCCSSSCSSSCCEECTTSSCEECTTSSSTTCCCCCSSSCCCCSCCCCC
T ss_pred ccccccccCCCCCcCcCcCCCCCEEECCCCCCceecccCCCCCCCCcCCCcCCccccCCC
Confidence 567788888999999999999999999999999999999999999999999999998653
No 2
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=99.72 E-value=2.6e-18 Score=109.59 Aligned_cols=59 Identities=68% Similarity=1.502 Sum_probs=53.9
Q ss_pred CCCCCccccccccccccccCceEEeccCCCCCcccccCCCCCCCCCCCccccccccCCC
Q psy14605 3 HIQDLQTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGP 61 (139)
Q Consensus 3 ~~d~~~~~~~~~C~vC~~~g~ll~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~~~~ 61 (139)
.+|..+..++.+|.+|+++|+||+||.|+++||++|++|++..+|.+.|+|+.|...++
T Consensus 2 ~~~~~~~~~~~~C~vC~~~g~ll~CD~C~~~fH~~Cl~p~l~~~p~g~W~C~~C~~~g~ 60 (61)
T 2l5u_A 2 PLGSYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGI 60 (61)
T ss_dssp CCSCCSSCCCSSCTTTSCCSSEEECSSSSCEEEHHHHCTTCCSCCCSSCCCTTGGGGSC
T ss_pred CCCcccCCCCCCCccCCCCCcEEECCCCChhhhhhccCCCCCCCCCCceECcccccccc
Confidence 35677788889999999999999999999999999999999999999999999987654
No 3
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=99.70 E-value=5.1e-18 Score=109.72 Aligned_cols=56 Identities=48% Similarity=1.174 Sum_probs=50.9
Q ss_pred ccccccccccccccCceEEeccCCCCCcccccCCCCCCCCCCCccccccccCCCCC
Q psy14605 8 QTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPE 63 (139)
Q Consensus 8 ~~~~~~~C~vC~~~g~ll~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~~~~~~ 63 (139)
.+.++.+|.+|+++|+||+||.|+++||++|++||+..+|.+.|+|+.|.....+.
T Consensus 4 ~~~~~~~C~vC~~~g~ll~CD~C~~~fH~~Cl~ppl~~~P~g~W~C~~C~~~~~~~ 59 (66)
T 1xwh_A 4 AQKNEDECAVCRDGGELICCDGCPRAFHLACLSPPLREIPSGTWRCSSCLQATVQE 59 (66)
T ss_dssp CCSCCCSBSSSSCCSSCEECSSCCCEECTTTSSSCCSSCCSSCCCCHHHHHTCCCC
T ss_pred CCCCCCCCccCCCCCCEEEcCCCChhhcccccCCCcCcCCCCCeECccccCccccc
Confidence 45678899999999999999999999999999999999999999999998765543
No 4
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=99.69 E-value=1.1e-17 Score=106.62 Aligned_cols=54 Identities=48% Similarity=1.294 Sum_probs=49.4
Q ss_pred ccccccccccccccCceEEeccCCCCCcccccCCCCCCCCCCCccccccccCCC
Q psy14605 8 QTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGP 61 (139)
Q Consensus 8 ~~~~~~~C~vC~~~g~ll~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~~~~ 61 (139)
++.++.+|.+|+++|+||+||.|+++||++|++|++..+|.++|+|+.|.....
T Consensus 5 ~d~~~~~C~vC~~~g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~~~ 58 (61)
T 1mm2_A 5 SDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCPAL 58 (61)
T ss_dssp SCSSCSSCTTTCCCSSCBCCSSSCCCBCSSSSSSCCSSCCSSCCCCTTTTTTCC
T ss_pred ccCCCCcCCCCCCCCCEEEcCCCCHHHcccccCCCcCcCCCCccCChhhcCchh
Confidence 346778999999999999999999999999999999999999999999987644
No 5
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.67 E-value=1.9e-17 Score=103.70 Aligned_cols=52 Identities=50% Similarity=1.296 Sum_probs=48.0
Q ss_pred CccccccccccccccCceEEeccCCCCCcccccCCCCCCCCCCCcccccccc
Q psy14605 7 LQTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVS 58 (139)
Q Consensus 7 ~~~~~~~~C~vC~~~g~ll~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~ 58 (139)
....++.+|.+|+.+|+||+||.|+++||++|++||+..+|.+.|+|+.|..
T Consensus 4 g~~~~~~~C~vC~~~g~ll~Cd~C~~~~H~~Cl~ppl~~~p~g~W~C~~C~~ 55 (56)
T 2yql_A 4 GSSGHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQD 55 (56)
T ss_dssp CCCSSCCSCSSSCCSSCCEECSSSSCEECSSSSSSCCCSCCCSSCCCHHHHC
T ss_pred CcCCCCCCCccCCCCCeEEEcCCCCcceECccCCCCcCCCCCCceEChhhhC
Confidence 3456778999999999999999999999999999999999999999999974
No 6
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=99.65 E-value=5.7e-17 Score=105.04 Aligned_cols=52 Identities=27% Similarity=0.639 Sum_probs=47.7
Q ss_pred cccccccccccccCceEEeccCCCCCcccccCCCCCCCCCCCccccccccCC
Q psy14605 9 TEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDG 60 (139)
Q Consensus 9 ~~~~~~C~vC~~~g~ll~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~~~ 60 (139)
+.+...|.+|+++|+||+||.|+++||++|++|++..+|.+.|||+.|....
T Consensus 9 ~~~~~~C~vC~~~~~ll~Cd~C~~~~H~~Cl~P~l~~~P~g~W~C~~C~~~~ 60 (66)
T 2lri_C 9 LAPGARCGVCGDGTDVLRCTHCAAAFHWRCHFPAGTSRPGTGLRCRSCSGDV 60 (66)
T ss_dssp CCTTCCCTTTSCCTTCEECSSSCCEECHHHHCTTTCCCCSSSCCCTTTTTCC
T ss_pred CCCCCCcCCCCCCCeEEECCCCCCceecccCCCccCcCCCCCEECccccCCC
Confidence 4556789999999999999999999999999999999999999999998653
No 7
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=99.64 E-value=4.5e-17 Score=103.27 Aligned_cols=50 Identities=52% Similarity=1.359 Sum_probs=46.9
Q ss_pred ccccccccccccCceEEeccCCCCCcccccCCCCCCCCCCCccccccccC
Q psy14605 10 EHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSD 59 (139)
Q Consensus 10 ~~~~~C~vC~~~g~ll~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~~ 59 (139)
.++.+|.+|+++|+||+||.|+++||++|++||+..+|.+.|+|+.|...
T Consensus 3 ~~~~~C~vC~~~g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~ 52 (60)
T 2puy_A 3 IHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQ 52 (60)
T ss_dssp CCCSSCTTTCCCSSCEECSSSSCEECGGGSSSCCSSCCCSCCCCHHHHHH
T ss_pred CCCCCCcCCCCCCcEEEcCCCCcCEECCcCCCCcCCCCCCceEChhccCh
Confidence 46789999999999999999999999999999999999999999999754
No 8
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=99.59 E-value=4.2e-16 Score=120.13 Aligned_cols=55 Identities=40% Similarity=1.092 Sum_probs=50.1
Q ss_pred ccccccccccccccCceEEeccCCCCCcccccCCCCCCCCCCCccccccccCCCC
Q psy14605 8 QTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPP 62 (139)
Q Consensus 8 ~~~~~~~C~vC~~~g~ll~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~~~~~ 62 (139)
++.++++|.+|+++|+||+||+|+++||++|++|++..+|.|.|+|+.|......
T Consensus 3 ~d~~~~~C~~C~~~g~ll~Cd~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~~~ 57 (207)
T 3u5n_A 3 DDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDIGKP 57 (207)
T ss_dssp CCSSCSSBTTTCCCEEEEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSSSC
T ss_pred CCCCCCCCCCCCCCCceEEcCCCCCccCCccCCCCCCCCCCCCEEeCceeCcccc
Confidence 3467789999999999999999999999999999999999999999999976543
No 9
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=99.58 E-value=3.3e-16 Score=106.53 Aligned_cols=57 Identities=30% Similarity=0.734 Sum_probs=49.0
Q ss_pred CCCCcccccccccccccc-----CceEEeccCCCCCcccccCCCCCC----CCCCCccccccccCC
Q psy14605 4 IQDLQTEHQDYCEVCQQG-----GEIILCDTCPRAYHLCCLDPELDE----TPEGKWSCPRCVSDG 60 (139)
Q Consensus 4 ~d~~~~~~~~~C~vC~~~-----g~ll~Cd~C~~~~H~~Cl~P~l~~----~p~~~W~C~~C~~~~ 60 (139)
-+++..+++.+|.+|+.+ +.||+||.|+++||++|++||+.. +|.+.|||+.|+...
T Consensus 8 ~dd~~~e~~~~C~vC~~~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~~~~~p~g~W~C~~C~~~~ 73 (88)
T 1wev_A 8 ADDFAMEMGLACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCTRQM 73 (88)
T ss_dssp CCCCHHHHCCSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSCCCHHHHHCTTCCCCCHHHHHHH
T ss_pred cccccCCCCCcCCCCCCCCCCCCCceEECCCCCCeEcCccCCCcccccccCCCCCCeeCccccchh
Confidence 344556777899999987 579999999999999999999984 899999999997643
No 10
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=99.57 E-value=9.4e-16 Score=116.05 Aligned_cols=52 Identities=40% Similarity=1.104 Sum_probs=48.3
Q ss_pred ccccccccccccCceEEeccCCCCCcccccCCCCCCCCCCCccccccccCCC
Q psy14605 10 EHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGP 61 (139)
Q Consensus 10 ~~~~~C~vC~~~g~ll~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~~~~ 61 (139)
.++++|.+|+++|+||+||+|+++||++|+.|++..+|.|.|+|+.|.....
T Consensus 2 ~~~~~C~~C~~~g~ll~Cd~C~~~~H~~C~~p~l~~~p~~~W~C~~C~~~~~ 53 (184)
T 3o36_A 2 PNEDWCAVCQNGGELLCCEKCPKVFHLSCHVPTLTNFPSGEWICTFCRDLSK 53 (184)
T ss_dssp CSCSSCTTTCCCSSCEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSSS
T ss_pred CCCCccccCCCCCeeeecCCCCcccCccccCCCCCCCCCCCEECccccCccc
Confidence 4678999999999999999999999999999999999999999999987643
No 11
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=99.57 E-value=8e-16 Score=94.31 Aligned_cols=45 Identities=51% Similarity=1.342 Sum_probs=41.8
Q ss_pred ccccccccC---ceEEeccCCCCCcccccCCCCCCCCCCCcccccccc
Q psy14605 14 YCEVCQQGG---EIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVS 58 (139)
Q Consensus 14 ~C~vC~~~g---~ll~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~ 58 (139)
+|.+|++++ +||+||.|+++||++|++|++..+|.++|+|+.|..
T Consensus 2 ~C~vC~~~~~~~~ll~Cd~C~~~~H~~Cl~p~l~~~P~g~W~C~~C~~ 49 (51)
T 1f62_A 2 RCKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPACQP 49 (51)
T ss_dssp CCTTTCCSSCCSCCEECTTTCCEECHHHHCTTCCSCCSSCCSCTTTSC
T ss_pred CCCCCCCCCCCCCEEECCCCChhhCcccCCCCcCCCCCCcEECcCccc
Confidence 689999765 699999999999999999999999999999999975
No 12
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.56 E-value=9.5e-16 Score=105.09 Aligned_cols=53 Identities=40% Similarity=1.040 Sum_probs=47.2
Q ss_pred CccccccccccccccC---ceEEeccCCCCCcccccCCCCCCCCCCCccccccccC
Q psy14605 7 LQTEHQDYCEVCQQGG---EIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSD 59 (139)
Q Consensus 7 ~~~~~~~~C~vC~~~g---~ll~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~~ 59 (139)
....++.+|.+|+.++ .||+||.|+++||++|++||+..+|.++|||+.|...
T Consensus 11 ~~~~~~~~C~vC~~~~~~~~ll~CD~C~~~~H~~Cl~Ppl~~~P~g~W~C~~C~~~ 66 (92)
T 2e6r_A 11 AQFIDSYICQVCSRGDEDDKLLFCDGCDDNYHIFCLLPPLPEIPRGIWRCPKCILA 66 (92)
T ss_dssp CCCCCCCCCSSSCCSGGGGGCEECTTTCCEECSSSSSSCCSSCCSSCCCCHHHHHH
T ss_pred hhccCCCCCccCCCcCCCCCEEEcCCCCchhccccCCCCcccCCCCCcCCccCcCc
Confidence 3446667899999876 4999999999999999999999999999999999764
No 13
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=99.55 E-value=9.7e-16 Score=98.46 Aligned_cols=54 Identities=31% Similarity=0.901 Sum_probs=47.0
Q ss_pred cccccccccccccc-----CceEEeccCCCCCcccccCCCCCC--C-CCCCccccccccCCC
Q psy14605 8 QTEHQDYCEVCQQG-----GEIILCDTCPRAYHLCCLDPELDE--T-PEGKWSCPRCVSDGP 61 (139)
Q Consensus 8 ~~~~~~~C~vC~~~-----g~ll~Cd~C~~~~H~~Cl~P~l~~--~-p~~~W~C~~C~~~~~ 61 (139)
++.++.+|.+|+.+ +.||+||.|+++||++|++|++.. + |.+.|||+.|.....
T Consensus 2 ~~~~~~~C~vC~~~~~~~~~~ll~Cd~C~~~~H~~C~~p~l~~~~~~p~~~W~C~~C~~~~~ 63 (66)
T 2yt5_A 2 SSGSSGVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVFATT 63 (66)
T ss_dssp CCCCCCCBSSSCCCCCBTTBCEEECSSSCCEEETTTSSSCCCHHHHHSSCCCCCHHHHHTTS
T ss_pred CCCCCCCCCCCCCCCCCCCCCEEECCCCChHHHhhhCCCcccccccCCCCCEECCCCcCccc
Confidence 35677899999987 789999999999999999999876 3 889999999986543
No 14
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=99.50 E-value=9e-15 Score=95.57 Aligned_cols=46 Identities=39% Similarity=1.104 Sum_probs=40.8
Q ss_pred ccccccc---cCceEEeccCCCCCcccccCCCCCCCCCC-CccccccccC
Q psy14605 14 YCEVCQQ---GGEIILCDTCPRAYHLCCLDPELDETPEG-KWSCPRCVSD 59 (139)
Q Consensus 14 ~C~vC~~---~g~ll~Cd~C~~~~H~~Cl~P~l~~~p~~-~W~C~~C~~~ 59 (139)
.|.+|++ ++.||+||+|+++||++|++||+..+|.| .|+|+.|...
T Consensus 20 ~C~~C~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~~ 69 (70)
T 3asl_A 20 ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRND 69 (70)
T ss_dssp SBTTTCCCSCGGGEEECTTTCCEEEGGGSSSCCSSCCSSSCCCCTTTSCC
T ss_pred CCcCCCCcCCCCCEEEcCCCCCceecccCCCCcCCCCCCCCcCCcCccCc
Confidence 4557785 57899999999999999999999999999 9999999853
No 15
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.49 E-value=1.3e-14 Score=96.51 Aligned_cols=46 Identities=46% Similarity=1.086 Sum_probs=42.0
Q ss_pred cccccccc---cCceEEeccCCCCCcccccCCCCCCCCCC-Ccccccccc
Q psy14605 13 DYCEVCQQ---GGEIILCDTCPRAYHLCCLDPELDETPEG-KWSCPRCVS 58 (139)
Q Consensus 13 ~~C~vC~~---~g~ll~Cd~C~~~~H~~Cl~P~l~~~p~~-~W~C~~C~~ 58 (139)
..|.+|+. ++.||+||.|+++||++|++||+..+|.| +|||+.|..
T Consensus 27 c~C~vC~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~ 76 (77)
T 2e6s_A 27 CSCRVCGGKHEPNMQLLCDECNVAYHIYCLNPPLDKVPEEEYWYCPSCKT 76 (77)
T ss_dssp SSCSSSCCCCCSTTEEECSSSCCEEETTSSSSCCSSCCCSSCCCCTTTCC
T ss_pred CCCcCcCCcCCCCCEEEcCCCCccccccccCCCccCCCCCCCcCCcCccC
Confidence 37889995 57899999999999999999999999999 999999974
No 16
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=99.48 E-value=8.3e-15 Score=99.66 Aligned_cols=51 Identities=31% Similarity=0.864 Sum_probs=44.9
Q ss_pred cccccccccccccC-----ceEEeccCCCCCcccccCCCCCCCCCCCccccccccCCC
Q psy14605 9 TEHQDYCEVCQQGG-----EIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGP 61 (139)
Q Consensus 9 ~~~~~~C~vC~~~g-----~ll~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~~~~ 61 (139)
.+++.+|.+|+.++ +||+||.|+++||++|++|++ +|.|.|||+.|.....
T Consensus 22 ~~~~~~C~vC~~~~s~~~~~ll~CD~C~~~fH~~Cl~p~~--vP~g~W~C~~C~~~~~ 77 (88)
T 2l43_A 22 IDEDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPY--IPEGQWLCRHCLQSRA 77 (88)
T ss_dssp CCCCCCCSSCCSSSSCSEEEEEECSSSCCCCCHHHHTCSS--CCSSCCCCHHHHHHTT
T ss_pred CCCCCcCCcCCCCCCCCCCCEEECCCCCchhhcccCCCCc--cCCCceECccccCccc
Confidence 35678999999886 899999999999999999875 8999999999986543
No 17
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=99.48 E-value=1.4e-14 Score=110.62 Aligned_cols=49 Identities=35% Similarity=0.934 Sum_probs=46.1
Q ss_pred ccccccccccCceEEeccCCCCCcccccCCCCCCCCCCCccccccccCC
Q psy14605 12 QDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDG 60 (139)
Q Consensus 12 ~~~C~vC~~~g~ll~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~~~ 60 (139)
+++|.+|+.+|+||+||+|+++||++|+.|++..+|.|.|+|+.|....
T Consensus 2 ~~~C~~C~~~g~ll~Cd~C~~~~H~~Cl~p~l~~~p~g~W~C~~C~~~~ 50 (189)
T 2ro1_A 2 ATICRVCQKPGDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVLP 50 (189)
T ss_dssp CCCBTTTCCCSSCCCCTTTCCBCCSTTSTTCCSSCCCTTCCTTTTSCSC
T ss_pred CCcCccCCCCCceeECCCCCchhccccCCCCcccCCCCCCCCcCccCCC
Confidence 4689999999999999999999999999999999999999999998654
No 18
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=99.47 E-value=3.6e-15 Score=97.80 Aligned_cols=51 Identities=31% Similarity=0.851 Sum_probs=44.4
Q ss_pred ccccccccccccccC-----ceEEeccCCCCCcccccCCCCCCCCCCCccccccccCC
Q psy14605 8 QTEHQDYCEVCQQGG-----EIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDG 60 (139)
Q Consensus 8 ~~~~~~~C~vC~~~g-----~ll~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~~~ 60 (139)
...++.+|.+|++++ +||+||.|+++||++|++|+. +|.|+|||+.|....
T Consensus 12 ~~~~~~~C~vC~~~~s~~~~~ll~CD~C~~~~H~~Cl~~~~--vP~g~W~C~~C~~~~ 67 (71)
T 2ku3_A 12 LIDEDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPY--IPEGQWLCRHCLQSR 67 (71)
T ss_dssp CCCSSCSCSSSCCCCCCSSSCEEECSSSCCEEEHHHHTCSS--CCSSCCCCHHHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCEEECCCCCCccccccCCCCc--CCCCCcCCccCcCcC
Confidence 446678999999875 799999999999999999874 899999999998643
No 19
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=99.40 E-value=1.1e-13 Score=92.03 Aligned_cols=45 Identities=38% Similarity=1.093 Sum_probs=38.9
Q ss_pred cccccccc---CceEEeccCCCCCcccccCCCCCCCCCCC-cccccccc
Q psy14605 14 YCEVCQQG---GEIILCDTCPRAYHLCCLDPELDETPEGK-WSCPRCVS 58 (139)
Q Consensus 14 ~C~vC~~~---g~ll~Cd~C~~~~H~~Cl~P~l~~~p~~~-W~C~~C~~ 58 (139)
.|.+|+.+ +.||+||.|+++||++|++|||..+|.++ |+|+.|+.
T Consensus 28 ~C~vC~~~~d~~~ll~CD~C~~~yH~~Cl~PpL~~~P~g~~W~C~~C~~ 76 (77)
T 3shb_A 28 ACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 76 (77)
T ss_dssp SBTTTCCCSCGGGEEECTTTCCEEETTTSSSCCSSCCSSSCCCCTTTC-
T ss_pred cCCccCCCCCCcceeEeCCCCCccCcccCCCcccCCCCCCceECcCccc
Confidence 35566654 46999999999999999999999999998 99999974
No 20
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=99.40 E-value=6.3e-14 Score=92.09 Aligned_cols=56 Identities=29% Similarity=0.624 Sum_probs=47.6
Q ss_pred CCCcccccccccccccc--C-ceEEeccCCCCCcccccCCCCCCCCCCCccccccccCC
Q psy14605 5 QDLQTEHQDYCEVCQQG--G-EIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDG 60 (139)
Q Consensus 5 d~~~~~~~~~C~vC~~~--g-~ll~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~~~ 60 (139)
.+.++.+..+|.+|+.+ + .||.||.|+.+||+.|++++...+|.+.|+|+.|....
T Consensus 11 ~~~~~~~~~~C~~C~~~~~~~~mi~CD~C~~wfH~~Cv~~~~~~~~~~~w~C~~C~~~~ 69 (75)
T 2k16_A 11 RDEWGNQIWICPGCNKPDDGSPMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCANKI 69 (75)
T ss_dssp ECSSSCEEECBTTTTBCCSSCCEEECSSSSSEEEHHHHTCSSCCCSSSCCCCTTTHHHH
T ss_pred ccccCCCCcCCCCCCCCCCCCCEEEcCCCCcccccccCCCCccCCCCCCEEChhccCch
Confidence 34455677889999986 3 69999999999999999998888888999999998653
No 21
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=99.39 E-value=1.4e-13 Score=96.75 Aligned_cols=51 Identities=51% Similarity=1.235 Sum_probs=46.0
Q ss_pred CccccccccccccccCceEEec--cCCCCCcccccCCCCCCCCCCCccccccccC
Q psy14605 7 LQTEHQDYCEVCQQGGEIILCD--TCPRAYHLCCLDPELDETPEGKWSCPRCVSD 59 (139)
Q Consensus 7 ~~~~~~~~C~vC~~~g~ll~Cd--~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~~ 59 (139)
....++++|.+|+++|+||+|| .|+++||++|++ |..+|.|.|+||.|...
T Consensus 10 ~~~~~~~~C~~C~~~G~ll~CD~~~Cp~~fH~~Cl~--L~~~P~g~W~Cp~c~C~ 62 (107)
T 4gne_A 10 PKQMHEDYCFQCGDGGELVMCDKKDCPKAYHLLCLN--LTQPPYGKWECPWHQCD 62 (107)
T ss_dssp CCCSSCSSCTTTCCCSEEEECCSTTCCCEECTGGGT--CSSCCSSCCCCGGGBCT
T ss_pred CcCCCCCCCCcCCCCCcEeEECCCCCCcccccccCc--CCcCCCCCEECCCCCCC
Confidence 3457788999999999999999 899999999999 89999999999998643
No 22
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=99.36 E-value=2.9e-13 Score=95.34 Aligned_cols=45 Identities=36% Similarity=1.076 Sum_probs=40.8
Q ss_pred cccccccc----CceEEeccCCCCCcccccCCCCCCCCCCCcccccccc
Q psy14605 14 YCEVCQQG----GEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVS 58 (139)
Q Consensus 14 ~C~vC~~~----g~ll~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~ 58 (139)
+|.+|+.+ +.||+||.|+++||++|+.|++..+|.++|||+.|..
T Consensus 63 ~C~vC~~~~~~~~~ll~Cd~C~~~yH~~Cl~p~l~~~P~~~W~C~~C~~ 111 (112)
T 3v43_A 63 TCSSCRDQGKNADNMLFCDSCDRGFHMECCDPPLTRMPKGMWICQICRP 111 (112)
T ss_dssp CBTTTCCCCCTTCCCEECTTTCCEECGGGCSSCCSSCCSSCCCCTTTSC
T ss_pred ccccccCcCCCccceEEcCCCCCeeecccCCCCCCCCCCCCeECCCCCC
Confidence 57778765 3799999999999999999999999999999999975
No 23
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=99.33 E-value=3.7e-13 Score=105.51 Aligned_cols=47 Identities=36% Similarity=1.014 Sum_probs=39.0
Q ss_pred ccccccccc---cCceEEeccCCCCCcccccCCCCCCCCCC-Ccccccccc
Q psy14605 12 QDYCEVCQQ---GGEIILCDTCPRAYHLCCLDPELDETPEG-KWSCPRCVS 58 (139)
Q Consensus 12 ~~~C~vC~~---~g~ll~Cd~C~~~~H~~Cl~P~l~~~p~~-~W~C~~C~~ 58 (139)
+..|.+|+. ++.||+||+|+++||++|++||+..+|.| .|+|+.|..
T Consensus 174 ~c~C~vC~~~~~~~~lL~CD~C~~~yH~~CL~PPL~~vP~G~~W~Cp~C~~ 224 (226)
T 3ask_A 174 VCACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 224 (226)
T ss_dssp TTSCSSSCCCCC--CCEECSSSCCEECSCC--CCCCSCCSSSCCCCGGGC-
T ss_pred CCCCcCCCCCCCCCCeEEcCCCCcceeCccCCCCcccCCCCCCCCCcCCcC
Confidence 346999997 46899999999999999999999999999 999999975
No 24
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=99.33 E-value=3.1e-13 Score=95.56 Aligned_cols=46 Identities=41% Similarity=1.119 Sum_probs=41.3
Q ss_pred ccccccc---cCceEEeccCCCCCcccccCCCCCCCCCCCccccccccC
Q psy14605 14 YCEVCQQ---GGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSD 59 (139)
Q Consensus 14 ~C~vC~~---~g~ll~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~~ 59 (139)
.|.+|+. ++.||+||.|+++||++|++||+..+|.|+|||+.|...
T Consensus 60 ~C~~C~~~~~~~~ll~Cd~C~~~yH~~Cl~ppl~~~P~g~W~C~~C~~~ 108 (114)
T 2kwj_A 60 SCILCGTSENDDQLLFCDDCDRGYHMYCLNPPVAEPPEGSWSCHLCWEL 108 (114)
T ss_dssp CCTTTTCCTTTTTEEECSSSCCEEETTTSSSCCSSCCSSCCCCHHHHHH
T ss_pred ccCcccccCCCCceEEcCCCCccccccccCCCccCCCCCCeECccccch
Confidence 5777777 367999999999999999999999999999999999753
No 25
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=99.32 E-value=2.3e-13 Score=99.98 Aligned_cols=52 Identities=27% Similarity=0.742 Sum_probs=46.8
Q ss_pred ccccccccccccccCceEEeccCCCCCcccccCCCCCC-------CCCCCccccccccC
Q psy14605 8 QTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDE-------TPEGKWSCPRCVSD 59 (139)
Q Consensus 8 ~~~~~~~C~vC~~~g~ll~Cd~C~~~~H~~Cl~P~l~~-------~p~~~W~C~~C~~~ 59 (139)
++.++.+|.+|+.+|+|++||+|+++||+.|+.|++.. .|.++|+|+.|...
T Consensus 59 ~Dg~~d~C~vC~~GG~LlcCD~Cpr~Fh~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~~~ 117 (142)
T 2lbm_A 59 SDGMDEQCRWCAEGGNLICCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPE 117 (142)
T ss_dssp TTSCBCSCSSSCCCSSEEECSSSCCEEEHHHHHHHTCHHHHHHHHTSTTCCCCTTTCCC
T ss_pred CCCCCCeecccCCCCcEEeCCCCCCeeeHhhcCCCCChhhhhhcccCCCCCEeecccCc
Confidence 45678999999999999999999999999999998862 48899999999864
No 26
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=99.29 E-value=1.1e-12 Score=91.81 Aligned_cols=47 Identities=38% Similarity=1.032 Sum_probs=42.1
Q ss_pred ccccccccCc---eEEeccCCCCCcccccCCCCCCCCCCCccccccccCC
Q psy14605 14 YCEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDG 60 (139)
Q Consensus 14 ~C~vC~~~g~---ll~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~~~ 60 (139)
+|.+|+++++ ||.||.|+++||++|+.||+..+|.+.|+|+.|....
T Consensus 56 ~C~~C~~~~~~~~ll~Cd~C~~~yH~~Cl~ppl~~~P~g~W~C~~C~~c~ 105 (111)
T 2ysm_A 56 VCQNCKQSGEDSKMLVCDTCDKGYHTFCLQPVMKSVPTNGWKCKNCRICI 105 (111)
T ss_dssp CCTTTCCCSCCTTEEECSSSCCEEEGGGSSSCCSSCCSSCCCCHHHHCCS
T ss_pred cccccCccCCCCCeeECCCCCcHHhHHhcCCccccCCCCCcCCcCCcCcC
Confidence 5777887764 9999999999999999999999999999999997653
No 27
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=99.26 E-value=5.4e-12 Score=82.54 Aligned_cols=50 Identities=42% Similarity=1.116 Sum_probs=42.6
Q ss_pred cccccccccccc--cCceEEecc--CC-CCCcccccCCCCCCCCCCCccccccccCCC
Q psy14605 9 TEHQDYCEVCQQ--GGEIILCDT--CP-RAYHLCCLDPELDETPEGKWSCPRCVSDGP 61 (139)
Q Consensus 9 ~~~~~~C~vC~~--~g~ll~Cd~--C~-~~~H~~Cl~P~l~~~p~~~W~C~~C~~~~~ 61 (139)
+++..+| +|++ .|.||.||. |+ .+||+.|++ ++..|.+.|||+.|.....
T Consensus 13 ~~~~~~C-~C~~~~~g~MI~CD~~~C~~~wfH~~Cvg--l~~~p~g~w~Cp~C~~~~~ 67 (71)
T 1wen_A 13 PNEPTYC-LCHQVSYGEMIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQESG 67 (71)
T ss_dssp TTSCCCS-TTCCCSCSSEECCSCSSCSCCCEETTTTT--CSSCCSSCCCCTTTSSCSS
T ss_pred CCCCCEE-ECCCCCCCCEeEeeCCCCCCccEecccCC--cCcCCCCCEECCCCCcccc
Confidence 4556789 7998 578999999 88 699999999 8888899999999986543
No 28
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=99.24 E-value=1.7e-12 Score=82.33 Aligned_cols=50 Identities=42% Similarity=1.142 Sum_probs=39.9
Q ss_pred Cccccccccccccc--cCceEEecc--CC-CCCcccccCCCCCCCCCCCccccccccC
Q psy14605 7 LQTEHQDYCEVCQQ--GGEIILCDT--CP-RAYHLCCLDPELDETPEGKWSCPRCVSD 59 (139)
Q Consensus 7 ~~~~~~~~C~vC~~--~g~ll~Cd~--C~-~~~H~~Cl~P~l~~~p~~~W~C~~C~~~ 59 (139)
.++++..+| +|++ .|.||.||. |+ .+||+.|++ ++.+|.+.|||+.|..+
T Consensus 5 ~d~~e~~~C-~C~~~~~g~mi~CD~cdC~~~wfH~~Cvg--l~~~p~g~w~C~~C~~~ 59 (60)
T 2vnf_A 5 VDPNEPTYC-LCHQVSYGEMIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQE 59 (60)
T ss_dssp ----CCEET-TTTEECCSEEEECSCTTCSSCEEETGGGT--CSSCCSSCCCCHHHHC-
T ss_pred cCCCCCCEE-ECCCcCCCCEEEeCCCCCCCceEehhcCC--CCcCCCCCEECcCccCc
Confidence 345566788 8998 578999999 66 799999999 88889999999999754
No 29
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=99.24 E-value=1.8e-12 Score=81.96 Aligned_cols=49 Identities=49% Similarity=1.265 Sum_probs=40.6
Q ss_pred ccccccccccccc--cCceEEecc--CC-CCCcccccCCCCCCCCCCCccccccccC
Q psy14605 8 QTEHQDYCEVCQQ--GGEIILCDT--CP-RAYHLCCLDPELDETPEGKWSCPRCVSD 59 (139)
Q Consensus 8 ~~~~~~~C~vC~~--~g~ll~Cd~--C~-~~~H~~Cl~P~l~~~p~~~W~C~~C~~~ 59 (139)
++++..+| +|++ .|.||.||. |+ .+||+.|++ ++..|.+.|+||.|..+
T Consensus 5 d~~e~~yC-~C~~~~~g~mi~CD~~~C~~~wfH~~Cvg--l~~~p~~~w~Cp~C~~~ 58 (59)
T 3c6w_A 5 GSNEPTYC-LCHQVSYGEMIGCDNPDCPIEWFHFACVD--LTTKPKGKWFCPRCVQE 58 (59)
T ss_dssp ---CCEET-TTTEECCSEEEECSCTTCSSCEEETGGGT--CSSCCSSCCCCHHHHCC
T ss_pred CCCCCcEE-ECCCCCCCCeeEeeCCCCCCCCEecccCC--cccCCCCCEECcCccCc
Confidence 34566788 8998 578999999 88 699999999 88888999999999754
No 30
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=99.20 E-value=1.6e-11 Score=83.99 Aligned_cols=51 Identities=41% Similarity=1.100 Sum_probs=42.9
Q ss_pred ccccccccccccc--cCceEEecc--CC-CCCcccccCCCCCCCCCCCccccccccCCC
Q psy14605 8 QTEHQDYCEVCQQ--GGEIILCDT--CP-RAYHLCCLDPELDETPEGKWSCPRCVSDGP 61 (139)
Q Consensus 8 ~~~~~~~C~vC~~--~g~ll~Cd~--C~-~~~H~~Cl~P~l~~~p~~~W~C~~C~~~~~ 61 (139)
++++..+| +|++ .|.||.||. |+ .+||+.|++ +...|.+.|||+.|.....
T Consensus 32 d~~e~~yC-iC~~~~~g~MI~CD~~dC~~~WfH~~CVg--l~~~p~g~W~Cp~C~~~~~ 87 (91)
T 1weu_A 32 DPNEPTYC-LCHQVSYGEMIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQESG 87 (91)
T ss_dssp CSCCCBCS-TTCCBCCSCCCCCSCSSCSCCCCCSTTTT--CSSCCCSSCCCTTTCCCCS
T ss_pred CCCCCcEE-ECCCCCCCCEeEecCCCCCCCCEecccCC--cCcCCCCCEECcCccCcCC
Confidence 34566788 9998 578999999 77 699999999 7788889999999987544
No 31
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=99.20 E-value=3.9e-12 Score=81.17 Aligned_cols=50 Identities=44% Similarity=1.182 Sum_probs=40.3
Q ss_pred Cccccccccccccc--cCceEEecc--CC-CCCcccccCCCCCCCCCCCccccccccC
Q psy14605 7 LQTEHQDYCEVCQQ--GGEIILCDT--CP-RAYHLCCLDPELDETPEGKWSCPRCVSD 59 (139)
Q Consensus 7 ~~~~~~~~C~vC~~--~g~ll~Cd~--C~-~~~H~~Cl~P~l~~~p~~~W~C~~C~~~ 59 (139)
.++++..+| +|++ .|.||.||. |+ .+||+.|++ ++..|.+.|+||.|...
T Consensus 6 ~d~~e~~yC-~C~~~~~g~MI~CD~c~C~~~WfH~~Cvg--l~~~p~~~w~Cp~C~~~ 60 (62)
T 2g6q_A 6 IDPNEPTYC-LCNQVSYGEMIGCDNEQCPIEWFHFSCVS--LTYKPKGKWYCPKCRGD 60 (62)
T ss_dssp ----CCEET-TTTEECCSEEEECSCTTCSSCEEETGGGT--CSSCCSSCCCCHHHHTC
T ss_pred cCCCCCcEE-ECCCCCCCCeeeeeCCCCCcccEecccCC--cCcCCCCCEECcCcccC
Confidence 345666788 8998 578999999 66 899999999 77788899999999764
No 32
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=99.16 E-value=1.6e-11 Score=85.90 Aligned_cols=50 Identities=32% Similarity=0.873 Sum_probs=44.8
Q ss_pred ccccccccccccccCce---EEeccCCCCCcccccCCCCCCCCCCCccccccc
Q psy14605 8 QTEHQDYCEVCQQGGEI---ILCDTCPRAYHLCCLDPELDETPEGKWSCPRCV 57 (139)
Q Consensus 8 ~~~~~~~C~vC~~~g~l---l~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~ 57 (139)
...++++|.+|+++|++ |+|+.|++.||++|+++++..++.+.|+|+.|.
T Consensus 3 ~~~~~~~C~~C~~~g~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~W~C~~C~ 55 (111)
T 2ysm_A 3 SGSSGANCAVCDSPGDLLDQFFCTTCGQHYHGMCLDIAVTPLKRAGWQCPECK 55 (111)
T ss_dssp CCCCCSCBTTTCCCCCTTTSEECSSSCCEECTTTTTCCCCTTTSTTCCCTTTC
T ss_pred CCCCCCCCcCCCCCCCCcCCeECCCCCCCcChHHhCCccccccccCccCCcCC
Confidence 34678899999998875 999999999999999998887888999999985
No 33
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=99.15 E-value=2.9e-11 Score=83.41 Aligned_cols=45 Identities=29% Similarity=0.795 Sum_probs=38.1
Q ss_pred cccccccc---cCceEEeccCCCCCcccccCCCCCCCCCCCccccccccC
Q psy14605 13 DYCEVCQQ---GGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSD 59 (139)
Q Consensus 13 ~~C~vC~~---~g~ll~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~~ 59 (139)
..| +|+. +|.||.||.|+.+||+.|++|++..+|. .|+|+.|...
T Consensus 29 vrC-iC~~~~~~~~mi~Cd~C~~w~H~~C~~~~~~~~p~-~w~C~~C~~~ 76 (98)
T 2lv9_A 29 TRC-ICGFTHDDGYMICCDKCSVWQHIDCMGIDRQHIPD-TYLCERCQPR 76 (98)
T ss_dssp CCC-TTSCCSCSSCEEEBTTTCBEEETTTTTCCTTSCCS-SBCCTTTSSS
T ss_pred EEe-ECCCccCCCcEEEcCCCCCcCcCcCCCCCccCCCC-CEECCCCcCC
Confidence 456 6765 4689999999999999999999888874 8999999754
No 34
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=99.12 E-value=2.4e-12 Score=93.22 Aligned_cols=52 Identities=27% Similarity=0.735 Sum_probs=45.4
Q ss_pred ccccccccccccccCceEEeccCCCCCcccccCCCCC-----CC--CCCCccccccccC
Q psy14605 8 QTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELD-----ET--PEGKWSCPRCVSD 59 (139)
Q Consensus 8 ~~~~~~~C~vC~~~g~ll~Cd~C~~~~H~~Cl~P~l~-----~~--p~~~W~C~~C~~~ 59 (139)
+++++.+|.+|++||+|++||.|+++||..|+.|++. .+ |.++|+|+.|...
T Consensus 53 ~Dg~~~~C~vC~dGG~LlcCd~Cpr~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~~~ 111 (129)
T 3ql9_A 53 SDGMDEQCRWCAEGGNLICCDFCHNAFCKKCILRNLGRRELSTIMDENNQWYCYICHPE 111 (129)
T ss_dssp TTSCBSSCTTTCCCSEEEECSSSSCEEEHHHHHHHTCHHHHHHHTCTTSCCCCTTTCCG
T ss_pred CCCCCCcCeecCCCCeeEecCCCchhhhHHHhCCCcchhHHHHhccCCCCeEcCCcCCH
Confidence 4577889999999999999999999999999998753 33 7899999999764
No 35
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=99.06 E-value=4.7e-11 Score=81.50 Aligned_cols=48 Identities=31% Similarity=0.952 Sum_probs=39.6
Q ss_pred ccccccccccccc--cCceEEeccCC---CCCcccccCCCCCCCCCCCccccc-ccc
Q psy14605 8 QTEHQDYCEVCQQ--GGEIILCDTCP---RAYHLCCLDPELDETPEGKWSCPR-CVS 58 (139)
Q Consensus 8 ~~~~~~~C~vC~~--~g~ll~Cd~C~---~~~H~~Cl~P~l~~~p~~~W~C~~-C~~ 58 (139)
++++..+| +|++ .|.||.||.|+ .+||+.|++ |+..|.+.|||+. |..
T Consensus 22 ~~~~~~yC-iC~~~~~g~MI~CD~c~C~~eWfH~~CVg--l~~~p~~~W~Cp~cC~~ 75 (90)
T 2jmi_A 22 NNQEEVYC-FCRNVSYGPMVACDNPACPFEWFHYGCVG--LKQAPKGKWYCSKDCKE 75 (90)
T ss_dssp --CCSCCS-TTTCCCSSSEECCCSSSCSCSCEETTTSS--CSSCTTSCCCSSHHHHH
T ss_pred CCCCCcEE-EeCCCCCCCEEEecCCCCccccCcCccCC--CCcCCCCCccCChhhcc
Confidence 34556789 8997 47899999966 899999999 7788889999999 974
No 36
>1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.80 E-value=9.6e-10 Score=71.58 Aligned_cols=48 Identities=40% Similarity=1.043 Sum_probs=39.7
Q ss_pred cccccccccccc--cCceEEeccCC---CCCcccccCCCCCCCCCCCccccccccC
Q psy14605 9 TEHQDYCEVCQQ--GGEIILCDTCP---RAYHLCCLDPELDETPEGKWSCPRCVSD 59 (139)
Q Consensus 9 ~~~~~~C~vC~~--~g~ll~Cd~C~---~~~H~~Cl~P~l~~~p~~~W~C~~C~~~ 59 (139)
+++..+| +|++ .|.||.||.|+ .+||+.|++ ++..|.+.|||+.|...
T Consensus 3 ~~~~~yC-~C~~~~~g~MI~CD~cdC~~~WfH~~Cvg--l~~~p~~~w~Cp~C~~~ 55 (70)
T 1x4i_A 3 SGSSGYC-ICNQVSYGEMVGCDNQDCPIEWFHYGCVG--LTEAPKGKWYCPQCTAA 55 (70)
T ss_dssp CSCCCCS-TTSCCCCSSEECCSCTTCSCCCEEHHHHT--CSSCCSSCCCCHHHHHH
T ss_pred CCCCeEE-EcCCCCCCCEeEeCCCCCCccCCcccccc--cCcCCCCCEECCCCCcc
Confidence 4566788 5987 46899999975 799999999 67778899999999754
No 37
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=98.74 E-value=3.2e-09 Score=67.33 Aligned_cols=53 Identities=21% Similarity=0.526 Sum_probs=41.1
Q ss_pred ccccccccccccc----CceEEeccCCCCCcccccCCCCCCCC-CCCccccccccCCC
Q psy14605 9 TEHQDYCEVCQQG----GEIILCDTCPRAYHLCCLDPELDETP-EGKWSCPRCVSDGP 61 (139)
Q Consensus 9 ~~~~~~C~vC~~~----g~ll~Cd~C~~~~H~~Cl~P~l~~~p-~~~W~C~~C~~~~~ 61 (139)
+++..+|.+|+++ +.||.||.|..+||..|++....... ...|+|+.|..+..
T Consensus 3 ~~e~~~C~~C~~~~~~~~~mI~Cd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~k~~ 60 (64)
T 1we9_A 3 SGSSGQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSNKSG 60 (64)
T ss_dssp CSSCCCCSSSCCCCCSSSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHHHHTTTC
T ss_pred CCCCCCCCCCCCccCCCCCEEEccCCCCCCCccccCcChhHhcCCCcEECCCCcCcCC
Confidence 3556789999975 46999999999999999995433322 36899999987644
No 38
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=98.71 E-value=6.3e-09 Score=67.64 Aligned_cols=54 Identities=24% Similarity=0.550 Sum_probs=41.0
Q ss_pred cccccccccccccc---C-ceEEeccCCCCCcccccCCCCCCCCCCCccccccccCCCC
Q psy14605 8 QTEHQDYCEVCQQG---G-EIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPP 62 (139)
Q Consensus 8 ~~~~~~~C~vC~~~---g-~ll~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~~~~~ 62 (139)
++....+| +|+.. | .||.||.|..+||..|++..........|+|+.|.....+
T Consensus 12 ~~~~~~~C-~C~~~~~~g~~mI~Cd~C~~W~H~~Cvg~~~~~~~~~~~~C~~C~~~~~p 69 (72)
T 1wee_A 12 VDNWKVDC-KCGTKDDDGERMLACDGCGVWHHTRCIGINNADALPSKFLCFRCIELSGP 69 (72)
T ss_dssp SCSSEECC-TTCCCSCCSSCEEECSSSCEEEETTTTTCCTTSCCCSCCCCHHHHHHCSS
T ss_pred CCCcceEe-eCCCccCCCCcEEECCCCCCccCCeeeccCccccCCCcEECCCccCCCCC
Confidence 34556789 79975 3 4999999999999999995533333478999999876544
No 39
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=98.63 E-value=1e-08 Score=67.77 Aligned_cols=54 Identities=24% Similarity=0.488 Sum_probs=40.6
Q ss_pred cccccccccccccc---CceEEec--cCCCCCcccccCCCCCC-----CCCCCccccccccCCCC
Q psy14605 8 QTEHQDYCEVCQQG---GEIILCD--TCPRAYHLCCLDPELDE-----TPEGKWSCPRCVSDGPP 62 (139)
Q Consensus 8 ~~~~~~~C~vC~~~---g~ll~Cd--~C~~~~H~~Cl~P~l~~-----~p~~~W~C~~C~~~~~~ 62 (139)
++++..+| +|+.. |.||.|| .|..+||..|++.+... .....|+|+.|......
T Consensus 12 ~~~~~~~C-iC~~~~~~g~MI~CD~~~C~~W~H~~CVgi~~~~~~~~~~~~~~~~C~~C~~~~~~ 75 (78)
T 1wew_A 12 QPEIKVRC-VCGNSLETDSMIQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEICRLTSGP 75 (78)
T ss_dssp SCCCCCCC-SSCCCCCCSCEEECSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCHHHHHCCSC
T ss_pred CCCCCEEe-ECCCcCCCCCEEEECCccCCccccCEEEccccccccccccCCCCEECCCCCcccCC
Confidence 34566788 89985 6799999 99999999999943221 11358999999876543
No 40
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=98.62 E-value=6.3e-09 Score=72.52 Aligned_cols=49 Identities=24% Similarity=0.726 Sum_probs=40.1
Q ss_pred cccccccccc----CceEEec-cCCCCCcccccCCCCCC--------CCCCCccccccccCCCC
Q psy14605 12 QDYCEVCQQG----GEIILCD-TCPRAYHLCCLDPELDE--------TPEGKWSCPRCVSDGPP 62 (139)
Q Consensus 12 ~~~C~vC~~~----g~ll~Cd-~C~~~~H~~Cl~P~l~~--------~p~~~W~C~~C~~~~~~ 62 (139)
...|.+|+++ +.|+.|| .|..+||..|++ ++. .|.+.|+|+.|......
T Consensus 3 ~~~C~iC~~p~~~~~~mi~Cdd~C~~WfH~~CVg--lt~~~~~~i~~~~~~~~~Cp~C~~~~~~ 64 (105)
T 2xb1_A 3 VYPCGACRSEVNDDQDAILCEASCQKWFHRECTG--MTESAYGLLTTEASAVWACDLCLKTKEG 64 (105)
T ss_dssp CCBCTTTCSBCCTTSCEEECTTTTCCEEEGGGTT--CCHHHHHHHHHCTTEEECCHHHHHTTTT
T ss_pred cCCCCCCCCccCCCCCEEEecCCcccccccccCC--cCHHHHHhhccCCCCCEECccccCcCCC
Confidence 4579999987 5799998 999999999999 443 35689999999876443
No 41
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=98.62 E-value=1.6e-08 Score=65.31 Aligned_cols=48 Identities=23% Similarity=0.610 Sum_probs=38.3
Q ss_pred cccccccccccc---CceEEeccCCCCCcccccCCCCCCCCCCCccccccccC
Q psy14605 10 EHQDYCEVCQQG---GEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSD 59 (139)
Q Consensus 10 ~~~~~C~vC~~~---g~ll~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~~ 59 (139)
.+..+| +|+.+ +.||.||.|..+||..|++.....+| +.|+|+.|...
T Consensus 17 ~~~~~C-iC~~~~~~~~MIqCd~C~~WfH~~Cvgi~~~~~~-~~~~C~~C~~s 67 (68)
T 3o70_A 17 QGLVTC-FCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVP-EVFVCQKCRDS 67 (68)
T ss_dssp TTCCCS-TTCCCCTTCCEEECTTTCCEEETTTTTCCTTSCC-SSCCCHHHHTC
T ss_pred CCceEe-ECCCcCCCCCEEECCCCCccccccccCcCcccCC-CcEECCCCCCC
Confidence 445678 99985 25999999999999999996554444 68999999753
No 42
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=98.61 E-value=3.4e-09 Score=74.65 Aligned_cols=45 Identities=36% Similarity=0.899 Sum_probs=37.2
Q ss_pred ccccccccc----------CceEEeccCCCCCcccccCCCCC---CCCCCCccccccc
Q psy14605 13 DYCEVCQQG----------GEIILCDTCPRAYHLCCLDPELD---ETPEGKWSCPRCV 57 (139)
Q Consensus 13 ~~C~vC~~~----------g~ll~Cd~C~~~~H~~Cl~P~l~---~~p~~~W~C~~C~ 57 (139)
++|.+|.++ ++||.|+.|++.||++|++++.. .++.+.|+|+.|.
T Consensus 2 ~~C~~C~~~~~~n~k~g~~~~Li~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 59 (114)
T 2kwj_A 2 SYCDFCLGGSNMNKKSGRPEELVSCADCGRSGHPTCLQFTLNMTEAVKTYKWQCIECK 59 (114)
T ss_dssp CCCSSSCCBTTBCTTTCCCCCCEECSSSCCEECTTTTTCCHHHHHHHHHTTCCCGGGC
T ss_pred CcCccCCCCccccccCCCCCCCeEeCCCCCccchhhCCChhhhhhccCCCccCccccC
Confidence 578888764 37999999999999999997633 4577899999994
No 43
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=98.55 E-value=2.3e-08 Score=64.35 Aligned_cols=54 Identities=22% Similarity=0.474 Sum_probs=38.7
Q ss_pred CCCcccccccccccccc---CceEEecc--CCCCCcccccCCCCCCC----CCCCccccccccC
Q psy14605 5 QDLQTEHQDYCEVCQQG---GEIILCDT--CPRAYHLCCLDPELDET----PEGKWSCPRCVSD 59 (139)
Q Consensus 5 d~~~~~~~~~C~vC~~~---g~ll~Cd~--C~~~~H~~Cl~P~l~~~----p~~~W~C~~C~~~ 59 (139)
|..++++..+| +|+.. |.||.||+ |..+||..|++...... ....|+|+.|...
T Consensus 3 d~~~~e~~v~C-~C~~~~~~g~mI~CD~~~C~~W~H~~Cvgi~~~~~~~~~~p~~~~C~~Cr~~ 65 (68)
T 2rsd_A 3 DSFQPEAKVRC-ICSSTMVNDSMIQCEDQRCQVWQHLNCVLIPDKPGESAEVPPVFYCELCRLS 65 (68)
T ss_dssp SCCCSSCEECC-TTCCCSCCSCEEECSCTTTCEEEETTTSCCCSSTTSCCCCCSSCCCHHHHHH
T ss_pred CCcCCCCCEEe-ECCCCcCCCCEEEECCCCCCCeEchhhCCCCcccccccCCCCcEECcCccCc
Confidence 34456667788 79864 67999995 99999999998422211 1247999999753
No 44
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=98.54 E-value=5.3e-09 Score=77.87 Aligned_cols=51 Identities=29% Similarity=0.669 Sum_probs=38.8
Q ss_pred cccccccccccccC----ceEEeccCCCCCcccccCCCCCC-CCCCCccccccccCC
Q psy14605 9 TEHQDYCEVCQQGG----EIILCDTCPRAYHLCCLDPELDE-TPEGKWSCPRCVSDG 60 (139)
Q Consensus 9 ~~~~~~C~vC~~~g----~ll~Cd~C~~~~H~~Cl~P~l~~-~p~~~W~C~~C~~~~ 60 (139)
+++..+| +|+.++ .||.||.|+.+||..|++..... .+.+.|+|+.|....
T Consensus 5 ~~~~~~C-~C~~~~~~~~~mi~Cd~C~~WfH~~Cv~~~~~~~~~~~~~~C~~C~~~~ 60 (174)
T 2ri7_A 5 SDTKLYC-ICKTPEDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQSTE 60 (174)
T ss_dssp --CCEET-TTTEECCTTSCEEECTTTCCEEEHHHHTCCHHHHTTCSSCCCHHHHHHH
T ss_pred CCCCcEe-eCCCCCCCCCCEeECCCCCchhChhhcCCchhhccCccCeecCCCcchh
Confidence 3566789 999863 59999999999999999843222 235789999998654
No 45
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=98.49 E-value=1.1e-08 Score=65.55 Aligned_cols=48 Identities=25% Similarity=0.826 Sum_probs=37.0
Q ss_pred ccccccccccccc----CceEEec-cCCCCCcccccCCCCCC--------CCCCCcccccccc
Q psy14605 9 TEHQDYCEVCQQG----GEIILCD-TCPRAYHLCCLDPELDE--------TPEGKWSCPRCVS 58 (139)
Q Consensus 9 ~~~~~~C~vC~~~----g~ll~Cd-~C~~~~H~~Cl~P~l~~--------~p~~~W~C~~C~~ 58 (139)
.+....|.+|+++ ..+|.|| .|..+||..|++ ++. .|.+.|+|+.|.+
T Consensus 5 ~~~~~~C~~C~~p~~~~~~mI~CD~~C~~WfH~~Cvg--lt~~~~~~l~~e~~~~w~C~~C~~ 65 (65)
T 2vpb_A 5 SDPVYPCGICTNEVNDDQDAILCEASCQKWFHRICTG--MTETAYGLLTAEASAVWGCDTCMA 65 (65)
T ss_dssp ----CBCTTTCSBCCTTSCEEEBTTTTCCEEEHHHHT--CCHHHHHHHHHCTTEEECCHHHHC
T ss_pred CCCcCcCccCCCccCCCCCeEecccCccccCchhccC--CCHHHHHHhhccCCCcEECcCccC
Confidence 3556789999986 2599999 999999999999 543 3667999999963
No 46
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.47 E-value=1.8e-08 Score=65.96 Aligned_cols=51 Identities=27% Similarity=0.653 Sum_probs=38.5
Q ss_pred ccccccccccc---CceEEeccCCCCCcccccCCCCCCC-----CCCCccccccccCCCC
Q psy14605 11 HQDYCEVCQQG---GEIILCDTCPRAYHLCCLDPELDET-----PEGKWSCPRCVSDGPP 62 (139)
Q Consensus 11 ~~~~C~vC~~~---g~ll~Cd~C~~~~H~~Cl~P~l~~~-----p~~~W~C~~C~~~~~~ 62 (139)
+..+| +|+++ +.||.||.|..+||..|++...... +...|+|+.|.....+
T Consensus 15 ~~~~C-~C~~~~~~~~MI~Cd~C~~WfH~~Cvgl~~~~~~~l~~~~~~~~C~~C~~~~~p 73 (76)
T 1wem_A 15 NALYC-ICRQPHNNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTILSGP 73 (76)
T ss_dssp TCCCS-TTCCCCCSSCEEECSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCCHHHHHHSCS
T ss_pred CCCEE-ECCCccCCCCEEEeCCCCCcEeCeEEccchhhhhhccCCCCeEECcCCcCccCc
Confidence 34778 89985 4699999999999999999432211 2468999999866443
No 47
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=98.42 E-value=7.2e-08 Score=64.76 Aligned_cols=58 Identities=24% Similarity=0.557 Sum_probs=45.9
Q ss_pred CCCccccccccccccc--cCceEEeccCCCCCcccccCCC------------CCCCCCCCccccccccCCCC
Q psy14605 5 QDLQTEHQDYCEVCQQ--GGEIILCDTCPRAYHLCCLDPE------------LDETPEGKWSCPRCVSDGPP 62 (139)
Q Consensus 5 d~~~~~~~~~C~vC~~--~g~ll~Cd~C~~~~H~~Cl~P~------------l~~~p~~~W~C~~C~~~~~~ 62 (139)
+.....++..|.||.. .+.++.|..|.+.||..|+.++ +...+..-|.|+.|...+..
T Consensus 8 ~~e~~~~D~~C~VC~~~t~~~l~pCRvC~RvfH~~CL~r~gy~~~~~a~e~~l~A~T~~GWSC~~CenL~lL 79 (89)
T 1wil_A 8 PREPVVNDEMCDVCEVWTAESLFPCRVCTRVFHDGCLRRMGYIQGDSAAEVTEMAHTETGWSCHYCDNINLL 79 (89)
T ss_dssp SCCCCCCSCCCTTTCCCCSSCCSSCSSSSSCCCHHHHHHHTSCCCCCCCSCSCCCSSSSSCCCTTTCCCCSS
T ss_pred cccCCCCCcccCccccccccceeccccccccccHhhcccccccccHHHHHHHHccCCCCCccccccchhhhh
Confidence 4455678899999994 6789999999999999999864 33446678999999765443
No 48
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=98.40 E-value=1.7e-08 Score=70.73 Aligned_cols=47 Identities=28% Similarity=0.639 Sum_probs=37.4
Q ss_pred ccccccccccc---------CceEEeccCCCCCcccccCCC--C-CCCCCCCccccccc
Q psy14605 11 HQDYCEVCQQG---------GEIILCDTCPRAYHLCCLDPE--L-DETPEGKWSCPRCV 57 (139)
Q Consensus 11 ~~~~C~vC~~~---------g~ll~Cd~C~~~~H~~Cl~P~--l-~~~p~~~W~C~~C~ 57 (139)
...+|.+|.++ ++||.|+.|++.||++|++.. + ..++.+.|+|+.|+
T Consensus 4 p~~~C~~C~~~~~~~~~g~~~~Ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 62 (112)
T 3v43_A 4 PIPICSFCLGTKEQNREKKPEELISCADCGNSGHPSCLKFSPELTVRVKALRWQCIECK 62 (112)
T ss_dssp CCSSBTTTCCCTTCCTTSCCCCCEECTTTCCEECHHHHTCCHHHHHHHHTSCCCCTTTC
T ss_pred cCccccccCCchhhCcCCCchhceEhhhcCCCCCCchhcCCHHHHHHhhccccccccCC
Confidence 44689999753 479999999999999999742 2 23567899999995
No 49
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=98.38 E-value=7.2e-08 Score=63.64 Aligned_cols=52 Identities=27% Similarity=0.590 Sum_probs=38.8
Q ss_pred cccccccccccc----CceEEeccCCCCCcccccCCCCCCC-CCCCccccccccCCCC
Q psy14605 10 EHQDYCEVCQQG----GEIILCDTCPRAYHLCCLDPELDET-PEGKWSCPRCVSDGPP 62 (139)
Q Consensus 10 ~~~~~C~vC~~~----g~ll~Cd~C~~~~H~~Cl~P~l~~~-p~~~W~C~~C~~~~~~ 62 (139)
....+| +|+.+ +.||.||.|..+||..|++...... ....|+|+.|.....+
T Consensus 10 ~~~~~C-~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~~~~ 66 (79)
T 1wep_A 10 LVPVYC-LCRQPYNVNHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCPDCEAVFGP 66 (79)
T ss_dssp CCCCCS-TTSCSCCSSSCEEEBTTTCCEEEHHHHTCCHHHHTTCSBBCCTTTTTTSCS
T ss_pred CCccEE-EcCCccCCCCceEEcCCCCCcEEeeecCcccccccCCCeEECCCcccccCC
Confidence 344567 89985 4699999999999999999432222 2368999999876544
No 50
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=98.36 E-value=1.1e-07 Score=58.09 Aligned_cols=44 Identities=25% Similarity=0.671 Sum_probs=34.7
Q ss_pred ccccccccc---CceEEeccCCCCCcccccCCCCCCCCCCCcccccccc
Q psy14605 13 DYCEVCQQG---GEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVS 58 (139)
Q Consensus 13 ~~C~vC~~~---g~ll~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~ 58 (139)
.+| +|+.+ +.||.||.|..+||..|++.....+| ..|+|+.|..
T Consensus 5 ~~C-~C~~~~~~~~MI~Cd~C~~W~H~~Cvgi~~~~~~-~~~~C~~C~~ 51 (52)
T 3o7a_A 5 VTC-FCMKPFAGRPMIECNECHTWIHLSCAKIRKSNVP-EVFVCQKCRD 51 (52)
T ss_dssp BCS-TTCCBCTTCCEEECTTTCCEEETTTTTCCGGGCC-SSCCCHHHHT
T ss_pred eEE-EeCCcCCCCCEEEcCCCCccccccccCCCcccCC-CcEECcCCCC
Confidence 356 68874 47999999999999999996544344 6899999963
No 51
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=98.28 E-value=1.2e-07 Score=62.03 Aligned_cols=52 Identities=31% Similarity=0.729 Sum_probs=38.5
Q ss_pred cccccccccccc----CceEEeccCCCCCcccccCCCCCCCCC-CCccccccccCCCC
Q psy14605 10 EHQDYCEVCQQG----GEIILCDTCPRAYHLCCLDPELDETPE-GKWSCPRCVSDGPP 62 (139)
Q Consensus 10 ~~~~~C~vC~~~----g~ll~Cd~C~~~~H~~Cl~P~l~~~p~-~~W~C~~C~~~~~~ 62 (139)
....+| +|+.+ +.||.||.|..+||..|++......+. ..|+|+.|......
T Consensus 8 ~~~~yC-iC~~~~~~~~~MI~Cd~C~~WfH~~Cvg~~~~~~~~~~~~~C~~C~~~~~~ 64 (75)
T 3kqi_A 8 TVPVYC-VCRLPYDVTRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNCEKTHGK 64 (75)
T ss_dssp CCCEET-TTTEECCTTSCEEECTTTCCEEEHHHHTCCTTTGGGBSSCCCHHHHHHHCC
T ss_pred CCeeEE-ECCCcCCCCCCEEEcCCCCCCEecccccccccccCCCCEEECCCCcccCCC
Confidence 344567 89985 369999999999999999944333332 57999999865444
No 52
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=98.22 E-value=1.1e-07 Score=58.12 Aligned_cols=44 Identities=20% Similarity=0.595 Sum_probs=32.4
Q ss_pred ccccccccC----ceEEec-cCCCCCcccccCCCCCCCCCCCccccccc
Q psy14605 14 YCEVCQQGG----EIILCD-TCPRAYHLCCLDPELDETPEGKWSCPRCV 57 (139)
Q Consensus 14 ~C~vC~~~g----~ll~Cd-~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~ 57 (139)
.|.+|+++. .||.|| .|..+||..|++..........|+|+.|.
T Consensus 4 ~cc~C~~p~~~~~~mI~Cd~~C~~WfH~~Cvgl~~~~~~~~~~~C~~C~ 52 (52)
T 2kgg_A 4 AAQNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINCA 52 (52)
T ss_dssp SCTTCCCCCCTTCCEEECTTTTCCEEETTTTTCCHHHHHHSCCCCSCC-
T ss_pred cCCCCcCccCCCCcEEEeCCCCCccCcccccCCCccccCCCCEECCCCC
Confidence 466788752 499999 89999999999933222223789999984
No 53
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=97.80 E-value=3.6e-06 Score=63.88 Aligned_cols=50 Identities=24% Similarity=0.723 Sum_probs=37.2
Q ss_pred ccccccccc---C----ceEEeccCCCCCcccccCCCCC------CCCC-CCccccccccCCCC
Q psy14605 13 DYCEVCQQG---G----EIILCDTCPRAYHLCCLDPELD------ETPE-GKWSCPRCVSDGPP 62 (139)
Q Consensus 13 ~~C~vC~~~---g----~ll~Cd~C~~~~H~~Cl~P~l~------~~p~-~~W~C~~C~~~~~~ 62 (139)
.+|.+|++. + .||.||.|..+||..|++.... ..|. ..|+|+.|......
T Consensus 3 ~~CpiC~k~Y~~~~~~~~MIqCd~C~~W~H~~Cvgi~~~~~e~~~~~pe~~~y~Cp~C~~~~~~ 66 (183)
T 3lqh_A 3 NFCPLCDKCYDDDDYESKMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTERHPA 66 (183)
T ss_dssp CBCTTTCCBCTTCCTTCCEEECTTTCCEEEGGGSSCCHHHHHHHHHSHHHHCCCCTTTCCSSSC
T ss_pred CcCCCCcCccCCcccCCCeEECCCCCcccchhccccCHHHHHHhhcCCCCCeeECcCCCCCCCH
Confidence 479999974 2 3999999999999999994321 1122 37999999876543
No 54
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=97.62 E-value=4.7e-06 Score=71.53 Aligned_cols=49 Identities=31% Similarity=0.663 Sum_probs=36.3
Q ss_pred cccccccccccc----CceEEeccCCCCCcccccCCCCCCCC-CCCccccccccC
Q psy14605 10 EHQDYCEVCQQG----GEIILCDTCPRAYHLCCLDPELDETP-EGKWSCPRCVSD 59 (139)
Q Consensus 10 ~~~~~C~vC~~~----g~ll~Cd~C~~~~H~~Cl~P~l~~~p-~~~W~C~~C~~~ 59 (139)
....+| +|+.+ +.||.||.|..+||..|++....... .+.|+|+.|...
T Consensus 35 ~~~~yC-~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~ 88 (488)
T 3kv5_D 35 PPPVYC-VCRQPYDVNRFMIECDICKDWFHGSCVGVEEHHAVDIDLYHCPNCAVL 88 (488)
T ss_dssp CCCEET-TTTEECCTTSCEEEBTTTCCEEEHHHHTCCGGGGGGEEEBCCHHHHHH
T ss_pred CCCeEE-eCCCcCCCCCCeEEccCCCCceeeeecCcCcccccCCCEEECCCCcCC
Confidence 334567 89985 45999999999999999994322222 257999999754
No 55
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=97.55 E-value=1.7e-05 Score=68.65 Aligned_cols=37 Identities=38% Similarity=0.731 Sum_probs=28.8
Q ss_pred ceEEeccCCCCCcccccCCCCCCC-CCCCccccccccC
Q psy14605 23 EIILCDTCPRAYHLCCLDPELDET-PEGKWSCPRCVSD 59 (139)
Q Consensus 23 ~ll~Cd~C~~~~H~~Cl~P~l~~~-p~~~W~C~~C~~~ 59 (139)
.||.||.|+.+||..|++-..... ..+.|+||.|...
T Consensus 57 ~mI~CD~C~~WfH~~CVgi~~~~a~~~~~y~Cp~C~~~ 94 (528)
T 3pur_A 57 QWIGCDSCQTWYHFLCSGLEQFEYYLYEKFFCPKCVPH 94 (528)
T ss_dssp SEEECTTTCCEEEGGGTTCCGGGTTTEEECCCTTTHHH
T ss_pred CEEECCCCCcCCCCcCCCCChhHhcCCCeEECcCCcCC
Confidence 389999999999999999432222 2368999999764
No 56
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=97.31 E-value=1.5e-05 Score=67.86 Aligned_cols=48 Identities=27% Similarity=0.653 Sum_probs=35.7
Q ss_pred ccccccccc----CceEEeccCCCCCcccccCCCCCCCC-CCCccccccccCCC
Q psy14605 13 DYCEVCQQG----GEIILCDTCPRAYHLCCLDPELDETP-EGKWSCPRCVSDGP 61 (139)
Q Consensus 13 ~~C~vC~~~----g~ll~Cd~C~~~~H~~Cl~P~l~~~p-~~~W~C~~C~~~~~ 61 (139)
.+| +|+.+ +.||.||.|..+||..|++-.....+ .+.|+|+.|.....
T Consensus 6 ~yC-iC~~~~d~~~~MIqCD~C~~WfH~~CVgi~~~~~~~~~~y~C~~C~~~~~ 58 (447)
T 3kv4_A 6 VYC-LCRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNCEVLHG 58 (447)
T ss_dssp EET-TTTEECCTTSCEEECTTTCCEEEHHHHTCCHHHHTTEEECCCHHHHHHHC
T ss_pred eEE-eCCCcCCCCCCeEEcCCCCcccccccCCcCcccccCCCEEECCCCccccC
Confidence 456 89874 56999999999999999993322222 26799999976533
No 57
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=97.19 E-value=5.8e-05 Score=56.08 Aligned_cols=53 Identities=30% Similarity=0.822 Sum_probs=42.5
Q ss_pred ccccccccccccccCceEEec--cCCCCCcccccCCCCCC------CCCCCccccccccCC
Q psy14605 8 QTEHQDYCEVCQQGGEIILCD--TCPRAYHLCCLDPELDE------TPEGKWSCPRCVSDG 60 (139)
Q Consensus 8 ~~~~~~~C~vC~~~g~ll~Cd--~C~~~~H~~Cl~P~l~~------~p~~~W~C~~C~~~~ 60 (139)
+++.+.+|.+|+.||+|++|| .|++.|-..|+.--+.. .....|.|..|....
T Consensus 75 eDG~~~yC~wC~~Gg~l~~Cdn~~C~r~FC~~CI~~nvG~~~~~~i~~~d~W~Cy~C~P~~ 135 (159)
T 3a1b_A 75 DDGYQSYCTICCGGREVLMCGNNNCCRCFCVECVDLLVGPGAAQAAIKEDPWNCYMCGHKG 135 (159)
T ss_dssp TTSSBSSCTTTSCCSEEEECSSTTTCCEEEHHHHHHHTCTTHHHHHHTSSSCCCTTTCSSC
T ss_pred CCCCcceeeEecCCCeEEeeCCCCCCCchhHHHHHHhcCHhHHHHHhccCCCEEEecCCcc
Confidence 346678999999999999999 89999999998632222 345789999998654
No 58
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=97.12 E-value=0.00016 Score=50.14 Aligned_cols=38 Identities=24% Similarity=0.710 Sum_probs=28.7
Q ss_pred ceEEeccCCCCCcccccCCCCCCCCC----CCccccccccCC
Q psy14605 23 EIILCDTCPRAYHLCCLDPELDETPE----GKWSCPRCVSDG 60 (139)
Q Consensus 23 ~ll~Cd~C~~~~H~~Cl~P~l~~~p~----~~W~C~~C~~~~ 60 (139)
.|+.|+.|+.+||..|++++...++. ..|.|+.|....
T Consensus 74 ~m~~C~~C~~~~H~~C~~~~~~~~~~~~~~~~~~C~~C~~~~ 115 (117)
T 4bbq_A 74 KLMECCICNEIVHPGCLQMDGEGLLNEELPNCWECPKCYQED 115 (117)
T ss_dssp SCEEETTTCCEECGGGCCSCCCCEECSSSSSEEECTTTC---
T ss_pred ceEEeeecCCeEECCCCCCCccccccccCCCCeECCCCcCCC
Confidence 48999999999999999976554332 359999998653
No 59
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=96.57 E-value=0.0004 Score=58.02 Aligned_cols=53 Identities=26% Similarity=0.825 Sum_probs=42.4
Q ss_pred ccccccccccccccCceEEec--cCCCCCcccccCCCCCC------CCCCCccccccccCC
Q psy14605 8 QTEHQDYCEVCQQGGEIILCD--TCPRAYHLCCLDPELDE------TPEGKWSCPRCVSDG 60 (139)
Q Consensus 8 ~~~~~~~C~vC~~~g~ll~Cd--~C~~~~H~~Cl~P~l~~------~p~~~W~C~~C~~~~ 60 (139)
+++.+.+|.+|+.||++++|| .|++.|-..|+.--+.. .....|.|..|....
T Consensus 89 ~DG~~~yCr~C~~Gg~l~~Cdn~~C~r~FC~~Ci~~n~g~~~~~~i~~~d~W~Cf~C~p~p 149 (386)
T 2pv0_B 89 DDGYQSYCSICCSGETLLICGNPDCTRCYCFECVDSLVGPGTSGKVHAMSNWVCYLCLPSS 149 (386)
T ss_dssp SSSSBCSCTTTCCCSSCEECCSTTCCCEECHHHHHHHTCTTHHHHHHHCSSCCCTTTSSCC
T ss_pred CCCCcccceEcCCCCeEEEeCCCCCCcchHHHHHHHhcChhHHHHhhccCCceEEEcCCcc
Confidence 356678999999999999999 99999999998633321 133689999998664
No 60
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=96.22 E-value=0.0019 Score=44.83 Aligned_cols=44 Identities=16% Similarity=0.316 Sum_probs=34.9
Q ss_pred cccccccc-----cccccCceEEeccCCCCCcccccCCCCCCCCCCCccc
Q psy14605 9 TEHQDYCE-----VCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSC 53 (139)
Q Consensus 9 ~~~~~~C~-----vC~~~g~ll~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C 53 (139)
+...++|. +|++... +.|..|+.+||..|+.+.|...+...|+|
T Consensus 50 P~g~W~Cp~c~C~~C~k~~~-~~C~~Cp~sfC~~c~~g~l~~~~~~~~~c 98 (107)
T 4gne_A 50 PYGKWECPWHQCDECSSAAV-SFCEFCPHSFCKDHEKGALVPSALEGRLC 98 (107)
T ss_dssp CSSCCCCGGGBCTTTCSBCC-EECSSSSCEECTTTCTTSCEECTTTTCEE
T ss_pred CCCCEECCCCCCCcCCCCCC-cCcCCCCcchhhhccCCcceecCCCCcee
Confidence 34556665 4555444 78999999999999999998888889997
No 61
>2ku7_A MLL1 PHD3-CYP33 RRM chimeric protein; transcriptional regulation, RRM domain, transcr; NMR {Homo sapiens}
Probab=95.96 E-value=0.0025 Score=44.02 Aligned_cols=38 Identities=21% Similarity=0.543 Sum_probs=28.7
Q ss_pred ceEEeccCCCCCcccccCCCC------CCCC-CCCccccccccCC
Q psy14605 23 EIILCDTCPRAYHLCCLDPEL------DETP-EGKWSCPRCVSDG 60 (139)
Q Consensus 23 ~ll~Cd~C~~~~H~~Cl~P~l------~~~p-~~~W~C~~C~~~~ 60 (139)
.||.||.|..+||..|++-.- ...| ...|.||.|....
T Consensus 1 ~mi~c~~c~~w~H~~c~~~~~~~~~~l~~lp~~~~~~c~~C~~~~ 45 (140)
T 2ku7_A 1 SMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTERH 45 (140)
T ss_dssp CCCCCSCCSSCHHHHHCCCCHHHHHHHHSSCTTTTCCSSCCTTTS
T ss_pred CccccccCCCccCCcccccCHHHHHHHhhccccceeeCccccccc
Confidence 378999999999999998331 2334 3479999998653
No 62
>3rsn_A SET1/ASH2 histone methyltransferase complex subun; PHD domain, winged helix domain, binding, transcription; 2.10A {Homo sapiens} PDB: 3s32_A
Probab=95.87 E-value=0.0061 Score=45.86 Aligned_cols=47 Identities=15% Similarity=0.360 Sum_probs=31.6
Q ss_pred cccccccccCc----eEEeccCCCCCcccccCCCCCC-CCC---CCccccccccCC
Q psy14605 13 DYCEVCQQGGE----IILCDTCPRAYHLCCLDPELDE-TPE---GKWSCPRCVSDG 60 (139)
Q Consensus 13 ~~C~vC~~~g~----ll~Cd~C~~~~H~~Cl~P~l~~-~p~---~~W~C~~C~~~~ 60 (139)
.+| -|+++|+ +|.|+.|.++||..|+..+... +|. -.+.|..|...+
T Consensus 6 ~yC-YCG~~~~~~~~mLqC~~C~qWFH~~Cl~~~~~~~lp~~~fY~F~C~~C~~~g 60 (177)
T 3rsn_A 6 GSV-DEENGRQLGEVELQCGICTKWFTADTFGIDTSSCLPFMTNYSFHCNVCHHSG 60 (177)
T ss_dssp ------CTTCCTTSCEEECTTTCCEEEGGGGTCCCTTCCTTCCSEEEECTTTSTTS
T ss_pred eEE-EcCCCCCCCceeEeeccccceecHHHhcccccCccccceeEEEEccccCCCC
Confidence 467 5888764 9999999999999999854433 332 247799997654
No 63
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=88.84 E-value=0.087 Score=32.18 Aligned_cols=48 Identities=27% Similarity=0.556 Sum_probs=33.0
Q ss_pred ccccccccccccc---CceEEeccCCCCCcccccCCCCCCCCCCCccccccccCC
Q psy14605 9 TEHQDYCEVCQQG---GEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDG 60 (139)
Q Consensus 9 ~~~~~~C~vC~~~---g~ll~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~~~ 60 (139)
...+..|.+|... +..+..-.|.-.||..|+...+... ..||.|....
T Consensus 11 ~~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~----~~CP~Cr~~~ 61 (69)
T 2kiz_A 11 EDTEEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITN----KKCPICRVDI 61 (69)
T ss_dssp TTCCCSBTTTTBCCCSSSCEEECTTSCEEEHHHHHHHHHHC----SBCTTTCSBS
T ss_pred CCCCCCCeeCCccccCCCcEEEeCCCCHHHHHHHHHHHHcC----CCCcCcCccc
Confidence 4555789999763 3444555799999999997544322 3599998653
No 64
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=88.33 E-value=0.17 Score=29.28 Aligned_cols=45 Identities=29% Similarity=0.599 Sum_probs=31.7
Q ss_pred ccccccccccc---Cc-eEEeccCCCCCcccccCCCCCCCCCCCccccccccC
Q psy14605 11 HQDYCEVCQQG---GE-IILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSD 59 (139)
Q Consensus 11 ~~~~C~vC~~~---g~-ll~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~~ 59 (139)
++..|.+|... ++ .+.-..|.-.||..|+...+.. ...||.|...
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~w~~~----~~~CP~Cr~~ 52 (55)
T 1iym_A 4 DGVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGS----HSTCPLCRLT 52 (55)
T ss_dssp CSCCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTTT----CCSCSSSCCC
T ss_pred CCCcCccCCccccCCCceEECCCCCCcccHHHHHHHHHc----CCcCcCCCCE
Confidence 34579999874 22 3444469999999999865543 3479999864
No 65
>4bbq_A Lysine-specific demethylase 2A; oxidoreductase, ubiquitin, ligase, ubiquitination, demethyla ZF-CXXC DNA binding domain, CPG island, chromatin; 2.24A {Homo sapiens}
Probab=86.75 E-value=0.1 Score=35.64 Aligned_cols=35 Identities=23% Similarity=0.454 Sum_probs=25.9
Q ss_pred cccccccccCceEEeccCCCCCcccccCCCCCCCCCCCcccccccc
Q psy14605 13 DYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVS 58 (139)
Q Consensus 13 ~~C~vC~~~g~ll~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~ 58 (139)
.+|.+|+..+ |+.|...||++|++++. |.|..|+.
T Consensus 8 ~~C~~C~~~~----C~~C~~c~~~~~~~~~~-------~~~~~c~~ 42 (117)
T 4bbq_A 8 RKCKACVQGE----CGVCHYCRDMKKFGGPG-------RMKQSCVL 42 (117)
T ss_dssp SCSHHHHSCC----CSCSHHHHHSGGGTSCC-------CSCCCCGG
T ss_pred CcCcCcCCcC----CCCCCCCcCCcccCCCC-------ccccchhh
Confidence 4677777654 99999999999998663 55666544
No 66
>2lq6_A Bromodomain-containing protein 1; PHD finger, metal binding protein; NMR {Homo sapiens}
Probab=85.68 E-value=0.33 Score=32.04 Aligned_cols=31 Identities=32% Similarity=0.798 Sum_probs=25.1
Q ss_pred cccccccccccc--CceEEec--cCCCCCcccccC
Q psy14605 10 EHQDYCEVCQQG--GEIILCD--TCPRAYHLCCLD 40 (139)
Q Consensus 10 ~~~~~C~vC~~~--g~ll~Cd--~C~~~~H~~Cl~ 40 (139)
-....|.+|+.. |-.|-|. .|..+||+.|..
T Consensus 15 R~~l~C~iC~~~~~GAciqC~~~~C~~~fHv~CA~ 49 (87)
T 2lq6_A 15 RWKLTCYLCKQKGVGASIQCHKANCYTAFHVTCAQ 49 (87)
T ss_dssp CCCCCBTTTTBCCSSCEEECSCTTTCCEEEHHHHH
T ss_pred HhcCCCcCCCCCCCcEeEecCCCCCCCcCcHHHHH
Confidence 445679999863 7888897 599999999964
No 67
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=85.39 E-value=0.044 Score=33.72 Aligned_cols=49 Identities=22% Similarity=0.309 Sum_probs=31.9
Q ss_pred ccccccccccccC--ce-EEe--ccCCCCCcccccCCCCCCCCCCCccccccccCC
Q psy14605 10 EHQDYCEVCQQGG--EI-ILC--DTCPRAYHLCCLDPELDETPEGKWSCPRCVSDG 60 (139)
Q Consensus 10 ~~~~~C~vC~~~g--~l-l~C--d~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~~~ 60 (139)
+....|.+|..++ .+ ..| .+.-+.||..|+...+.. ++.+.|+.|....
T Consensus 4 ~~~~~CrIC~~~~~~~l~~PC~C~gs~~~~H~~Cl~~W~~~--~~~~~C~~C~~~~ 57 (60)
T 1vyx_A 4 EDVPVCWICNEELGNERFRACGCTGELENVHRSCLSTWLTI--SRNTACQICGVVY 57 (60)
T ss_dssp CSCCEETTTTEECSCCCCCSCCCSSGGGSCCHHHHHHHHHH--HTCSBCTTTCCBC
T ss_pred CCCCEeEEeecCCCCceecCcCCCCchhhhHHHHHHHHHHh--CCCCccCCCCCee
Confidence 4556899998643 23 233 233349999999865432 2468999998653
No 68
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=85.14 E-value=0.62 Score=28.88 Aligned_cols=49 Identities=29% Similarity=0.574 Sum_probs=33.0
Q ss_pred ccccccccccccc---CceEEeccCCCCCcccccCCCCCCCCCCCccccccccCCC
Q psy14605 9 TEHQDYCEVCQQG---GEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGP 61 (139)
Q Consensus 9 ~~~~~~C~vC~~~---g~ll~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~~~~ 61 (139)
...+..|.+|... +..+.--.|.-.||..|+...+.. ...||.|.....
T Consensus 12 ~~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~----~~~CP~Cr~~~~ 63 (78)
T 2ect_A 12 VGSGLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQ----HDSCPVCRKSLT 63 (78)
T ss_dssp SSSSCCCTTTTSCCCTTSCEEECTTSCEEETTTTHHHHTT----TCSCTTTCCCCC
T ss_pred CCCCCCCeeCCccccCCCCEEEeCCCCeecHHHHHHHHHc----CCcCcCcCCccC
Confidence 3456789999764 233333368889999999755432 247999987643
No 69
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=84.98 E-value=0.18 Score=32.79 Aligned_cols=47 Identities=21% Similarity=0.496 Sum_probs=32.8
Q ss_pred cccccccccccc---CceEEeccCCCCCcccccCCCCCCCCCCCccccccccCC
Q psy14605 10 EHQDYCEVCQQG---GEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDG 60 (139)
Q Consensus 10 ~~~~~C~vC~~~---g~ll~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~~~ 60 (139)
+.+..|.+|... ++.+..-.|.-.||..|+...+... -.||.|....
T Consensus 38 ~~~~~C~IC~~~~~~~~~~~~l~C~H~Fh~~Ci~~wl~~~----~~CP~Cr~~~ 87 (91)
T 2l0b_A 38 GQEMCCPICCSEYVKGDVATELPCHHYFHKPCVSIWLQKS----GTCPVCRCMF 87 (91)
T ss_dssp SSCSEETTTTEECCTTCEEEEETTTEEEEHHHHHHHHTTT----CBCTTTCCBS
T ss_pred CCCCCCcccChhhcCCCcEEecCCCChHHHHHHHHHHHcC----CcCcCcCccC
Confidence 455679999864 3434444599999999998655432 3799998653
No 70
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=84.92 E-value=0.4 Score=30.75 Aligned_cols=48 Identities=23% Similarity=0.555 Sum_probs=34.8
Q ss_pred ccccccccccccC-ceEEeccCCCCCcccccCCCCCCCCCCCccccccccC
Q psy14605 10 EHQDYCEVCQQGG-EIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSD 59 (139)
Q Consensus 10 ~~~~~C~vC~~~g-~ll~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~~ 59 (139)
+....|.+|...- .-+-|..|...||..|+...+... ..=.||.|...
T Consensus 13 ~~i~~C~IC~~~i~~g~~C~~C~h~fH~~Ci~kWl~~~--~~~~CP~Cr~~ 61 (74)
T 2ct0_A 13 DAVKICNICHSLLIQGQSCETCGIRMHLPCVAKYFQSN--AEPRCPHCNDY 61 (74)
T ss_dssp SSSCBCSSSCCBCSSSEECSSSCCEECHHHHHHHSTTC--SSCCCTTTCSC
T ss_pred CCCCcCcchhhHcccCCccCCCCchhhHHHHHHHHHhc--CCCCCCCCcCc
Confidence 3446799999742 335688999999999998665443 22469999865
No 71
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=84.85 E-value=0.14 Score=31.85 Aligned_cols=48 Identities=27% Similarity=0.640 Sum_probs=33.3
Q ss_pred cccccccccccc---CceEEeccCCCCCcccccCCCCCCCCCCCccccccccCCC
Q psy14605 10 EHQDYCEVCQQG---GEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGP 61 (139)
Q Consensus 10 ~~~~~C~vC~~~---g~ll~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~~~~ 61 (139)
..+..|.+|... ++.+..-.|.-.||..|+...+.. ...||.|.....
T Consensus 21 ~~~~~C~IC~~~~~~~~~~~~l~C~H~fh~~Ci~~w~~~----~~~CP~Cr~~~~ 71 (75)
T 1x4j_A 21 SEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKA----NRTCPICRADSG 71 (75)
T ss_dssp SSCCEETTTTEECCBTCEEEEETTTEEEETTHHHHHHHH----CSSCTTTCCCCC
T ss_pred CCCCCCeECCcccCCCCeEEEECCCCHhHHHHHHHHHHc----CCcCcCcCCcCC
Confidence 345689999964 444455569989999999854432 247999986543
No 72
>1weq_A PHD finger protein 7; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=84.05 E-value=1.1 Score=29.60 Aligned_cols=36 Identities=33% Similarity=0.795 Sum_probs=28.4
Q ss_pred ceEEeccCCC-CCcccccCCCCCCCCCCCccccccccCCC
Q psy14605 23 EIILCDTCPR-AYHLCCLDPELDETPEGKWSCPRCVSDGP 61 (139)
Q Consensus 23 ~ll~Cd~C~~-~~H~~Cl~P~l~~~p~~~W~C~~C~~~~~ 61 (139)
.||+|..|.. +-|..|.. +.. ....|.|..|.....
T Consensus 45 ~L~lC~~Cgs~gtH~~Cs~--l~~-~~~~weC~~C~~v~~ 81 (85)
T 1weq_A 45 RLILCATCGSHGTHRDCSS--LRP-NSKKWECNECLPASG 81 (85)
T ss_dssp BCEECSSSCCCEECSGGGT--CCT-TCSCCCCTTTSCCSS
T ss_pred EEEeCcccCCchhHHHHhC--CcC-CCCCEECCcCccccC
Confidence 4999999986 89999998 432 346899999986443
No 73
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=80.29 E-value=0.4 Score=30.54 Aligned_cols=45 Identities=24% Similarity=0.777 Sum_probs=30.7
Q ss_pred cccccccccccC--------------c-eEEeccCCCCCcccccCCCCCCCCCCCccccccccC
Q psy14605 11 HQDYCEVCQQGG--------------E-IILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSD 59 (139)
Q Consensus 11 ~~~~C~vC~~~g--------------~-ll~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~~ 59 (139)
.+..|.+|...- + .+.-..|.-.||..|+..-+... -.||.|...
T Consensus 14 ~~~~C~IC~~~~~~~C~iC~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~----~~CP~CR~~ 73 (81)
T 2ecl_A 14 ECDTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQN----NRCPLCQQD 73 (81)
T ss_dssp CCSCBTTTTBCTTSCCTTHHHHTCTTTCCEEEETTSCEEEHHHHHHHTTTC----CBCTTTCCB
T ss_pred CCCCCcccChhhhccCcccccccCCCceEEEeCCCCCccChHHHHHHHHhC----CCCCCcCCC
Confidence 345677777632 2 33334699999999998766543 279999865
No 74
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=80.24 E-value=0.26 Score=31.85 Aligned_cols=51 Identities=22% Similarity=0.461 Sum_probs=33.2
Q ss_pred cccccccccccc----CceEE-e--ccCCCCCcccccCCCCCCCCCCCccccccccCCCC
Q psy14605 10 EHQDYCEVCQQG----GEIIL-C--DTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPP 62 (139)
Q Consensus 10 ~~~~~C~vC~~~----g~ll~-C--d~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~~~~~ 62 (139)
.....|.||... +.++. | .+....||..|+...+.. .+...||.|......
T Consensus 13 ~~~~~C~IC~~~~~~~~~l~~pC~C~Gs~h~fH~~Cl~~Wl~~--~~~~~CplCr~~~~~ 70 (80)
T 2d8s_A 13 SSQDICRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKS--SDTRCCELCKYEFIM 70 (80)
T ss_dssp TTSCCCSSSCCCCCSSSCEECSSSCCSSSCCEETTHHHHHHHH--HCCSBCSSSCCBCCC
T ss_pred CCCCCCeEcCccccCCCeeEeccccCCcCCeeCHHHHHHHHhh--CCCCCCCCCCCeeec
Confidence 445689999864 23432 2 223489999999865443 234689999876544
No 75
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=79.60 E-value=0.59 Score=28.59 Aligned_cols=47 Identities=15% Similarity=0.311 Sum_probs=31.8
Q ss_pred cccccccccccccC-ceEEeccCCCCCcccccCCCCCCCCCCCccccccccCC
Q psy14605 9 TEHQDYCEVCQQGG-EIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDG 60 (139)
Q Consensus 9 ~~~~~~C~vC~~~g-~ll~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~~~ 60 (139)
...+..|.+|...- +.+.- .|.-.||..|+...+.. ...||.|....
T Consensus 12 ~~~~~~C~IC~~~~~~~~~~-~CgH~fC~~Ci~~~~~~----~~~CP~Cr~~~ 59 (71)
T 2d8t_A 12 SLTVPECAICLQTCVHPVSL-PCKHVFCYLCVKGASWL----GKRCALCRQEI 59 (71)
T ss_dssp SSSCCBCSSSSSBCSSEEEE-TTTEEEEHHHHHHCTTC----SSBCSSSCCBC
T ss_pred CCCCCCCccCCcccCCCEEc-cCCCHHHHHHHHHHHHC----CCcCcCcCchh
Confidence 34557899999753 22222 68888999998754433 25899998753
No 76
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=79.43 E-value=0.29 Score=32.72 Aligned_cols=51 Identities=24% Similarity=0.497 Sum_probs=33.3
Q ss_pred cccccccccccC------------------ceEEeccCCCCCcccccCCCCCCCC-CCCccccccccCCC
Q psy14605 11 HQDYCEVCQQGG------------------EIILCDTCPRAYHLCCLDPELDETP-EGKWSCPRCVSDGP 61 (139)
Q Consensus 11 ~~~~C~vC~~~g------------------~ll~Cd~C~~~~H~~Cl~P~l~~~p-~~~W~C~~C~~~~~ 61 (139)
.+..|.||...- ..+.--.|.-.||..|+...+.... ...-.||.|.....
T Consensus 24 ~~~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~Fh~~Ci~~wl~~~~~~~~~~CP~CR~~~~ 93 (114)
T 1v87_A 24 PEEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKTIYG 93 (114)
T ss_dssp CSCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCCBSS
T ss_pred CCCcCccCChhhcCcccccccccccccCcccceecCCCCCcccHHHHHHHHHcccCCCCCcCCCCCCccC
Confidence 346899998641 1222457889999999986542211 23468999987544
No 77
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=78.01 E-value=0.22 Score=28.76 Aligned_cols=45 Identities=22% Similarity=0.571 Sum_probs=31.7
Q ss_pred ccccccccccc----CceEEeccCCCCCcccccCCCCCCCCCCCccccccccC
Q psy14605 11 HQDYCEVCQQG----GEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSD 59 (139)
Q Consensus 11 ~~~~C~vC~~~----g~ll~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~~ 59 (139)
.+..|.+|... +..+..-.|.-.||..|+...+... ..||.|...
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~----~~CP~Cr~~ 52 (55)
T 2ecm_A 4 GSSGCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEG----YRCPLCSGP 52 (55)
T ss_dssp CCCSCTTTCCCCCTTTSCEEECTTSCEEETTHHHHHHHHT----CCCTTSCCS
T ss_pred CCCcCcccChhhcCCCcCeEecCCCCcccHHHHHHHHHcC----CcCCCCCCc
Confidence 34679999874 2346667799999999997543322 579999764
No 78
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=76.96 E-value=0.64 Score=35.95 Aligned_cols=47 Identities=23% Similarity=0.549 Sum_probs=34.3
Q ss_pred ccccccccccc-CceEEeccCCCCCcccccCCCCCCCCCCCccccccccC
Q psy14605 11 HQDYCEVCQQG-GEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSD 59 (139)
Q Consensus 11 ~~~~C~vC~~~-g~ll~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~~ 59 (139)
....|.+|..- ..-+.|..|+..||..|+.-.+.. .+.-.||.|...
T Consensus 179 ~i~~C~iC~~iv~~g~~C~~C~~~~H~~C~~~~~~~--~~~~~CP~C~~~ 226 (238)
T 3nw0_A 179 AVKICNICHSLLIQGQSCETCGIRMHLPCVAKYFQS--NAEPRCPHCNDY 226 (238)
T ss_dssp TCCBCTTTCSBCSSCEECSSSCCEECHHHHHHHTTT--CSSCBCTTTCCB
T ss_pred CCCcCcchhhHHhCCcccCccChHHHHHHHHHHHHh--CCCCCCCCCCCC
Confidence 35679999984 244779999999999999743332 234579999764
No 79
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=74.32 E-value=4.4 Score=23.54 Aligned_cols=45 Identities=22% Similarity=0.423 Sum_probs=28.5
Q ss_pred ccccccccccccCceEEeccCCCCCcccccCCCCCCCCCCCccccccccCCC
Q psy14605 10 EHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGP 61 (139)
Q Consensus 10 ~~~~~C~vC~~~g~ll~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~~~~ 61 (139)
.+...|.+|...-.-..--.|.-.|+..|+.. ..-.||.|.....
T Consensus 4 ~~~~~C~IC~~~~~~p~~l~CgH~fC~~Ci~~-------~~~~CP~Cr~~~~ 48 (56)
T 1bor_A 4 FQFLRCQQCQAEAKCPKLLPCLHTLCSGCLEA-------SGMQCPICQAPWP 48 (56)
T ss_dssp CCCSSCSSSCSSCBCCSCSTTSCCSBTTTCSS-------SSSSCSSCCSSSS
T ss_pred ccCCCceEeCCccCCeEEcCCCCcccHHHHcc-------CCCCCCcCCcEee
Confidence 44567999987532111124777788888763 2357999987643
No 80
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=74.31 E-value=0.38 Score=29.58 Aligned_cols=48 Identities=25% Similarity=0.474 Sum_probs=32.0
Q ss_pred cccccccccccc---CceEEeccCCCCCcccccCCCCCCCCCCCccccccccCCC
Q psy14605 10 EHQDYCEVCQQG---GEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGP 61 (139)
Q Consensus 10 ~~~~~C~vC~~~---g~ll~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~~~~ 61 (139)
..+..|.+|... +..+.--.|.-.||..|+...+... -.||.|.....
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~C~H~f~~~Ci~~~~~~~----~~CP~Cr~~~~ 63 (74)
T 2ep4_A 13 NLHELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVR----KVCPLCNMPVL 63 (74)
T ss_dssp CCSCBCSSSCCBCCSSSCEEEETTTEEEEHHHHHHHHHHC----SBCTTTCCBCS
T ss_pred CCCCCCcCCCcccCCCCcEEEcCCCCEecHHHHHHHHHcC----CcCCCcCcccc
Confidence 455789999975 2333222588899999997544322 27999987543
No 81
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=72.56 E-value=1 Score=27.77 Aligned_cols=50 Identities=20% Similarity=0.540 Sum_probs=33.0
Q ss_pred ccccccccccccC-ceEEeccCCCCCcccccCCCCCCCCCCCccccccccCCC
Q psy14605 10 EHQDYCEVCQQGG-EIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGP 61 (139)
Q Consensus 10 ~~~~~C~vC~~~g-~ll~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~~~~ 61 (139)
..+..|.+|...- +-+.-..|.-.||..|+...+... +.-.||.|.....
T Consensus 13 ~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~~--~~~~CP~Cr~~~~ 63 (74)
T 2yur_A 13 PDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLES--DEHTCPTCHQNDV 63 (74)
T ss_dssp CGGGSCSSSCCCCTTCEECSSSCCEECTTHHHHHHHHS--SSSCCSSSCCSSC
T ss_pred CCCCCCcCCChHHhCCeEcCCCCCHHHHHHHHHHHHhc--CCCcCCCCCCcCC
Confidence 4557899998753 333333488899999987544321 2457999988643
No 82
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=71.84 E-value=2.2 Score=25.78 Aligned_cols=49 Identities=18% Similarity=0.478 Sum_probs=33.0
Q ss_pred ccccccccccccC-ceEEeccCCCCCcccccCCCCCCCCCCCccccccccCC
Q psy14605 10 EHQDYCEVCQQGG-EIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDG 60 (139)
Q Consensus 10 ~~~~~C~vC~~~g-~ll~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~~~ 60 (139)
.....|.+|...- +-+.- .|+-.||..|+...+.. ..+.-.||.|....
T Consensus 18 ~~~~~C~IC~~~~~~~~~~-~CgH~fC~~Ci~~~~~~-~~~~~~CP~Cr~~~ 67 (73)
T 2ysl_A 18 QEEVICPICLDILQKPVTI-DCGHNFCLKCITQIGET-SCGFFKCPLCKTSV 67 (73)
T ss_dssp CCCCBCTTTCSBCSSEEEC-TTCCEEEHHHHHHHCSS-SCSCCCCSSSCCCC
T ss_pred ccCCEeccCCcccCCeEEc-CCCChhhHHHHHHHHHc-CCCCCCCCCCCCcC
Confidence 4456799999853 22222 89989999998754432 13456899998754
No 83
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=71.83 E-value=1.2 Score=26.61 Aligned_cols=46 Identities=20% Similarity=0.384 Sum_probs=31.6
Q ss_pred ccccccccccccC--ceEEeccCCCCCcccccCCCCCCCCCCCccccccccCC
Q psy14605 10 EHQDYCEVCQQGG--EIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDG 60 (139)
Q Consensus 10 ~~~~~C~vC~~~g--~ll~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~~~ 60 (139)
.....|.+|...- ..+ -.|+-.||..|+...+. .+...||.|....
T Consensus 13 ~~~~~C~IC~~~~~~p~~--~~CgH~fC~~Ci~~~~~---~~~~~CP~Cr~~~ 60 (66)
T 2ecy_A 13 EDKYKCEKCHLVLCSPKQ--TECGHRFCESCMAALLS---SSSPKCTACQESI 60 (66)
T ss_dssp CCCEECTTTCCEESSCCC--CSSSCCCCHHHHHHHHT---TSSCCCTTTCCCC
T ss_pred CcCCCCCCCChHhcCeeE--CCCCCHHHHHHHHHHHH---hCcCCCCCCCcCC
Confidence 4456799998752 222 37888999999875543 2345799998753
No 84
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=71.82 E-value=1.3 Score=36.82 Aligned_cols=50 Identities=26% Similarity=0.630 Sum_probs=33.3
Q ss_pred cccccccccccc----Cc--eEEec--cCCCCCcccccCCCCCCCCC-------CCccccccccC
Q psy14605 10 EHQDYCEVCQQG----GE--IILCD--TCPRAYHLCCLDPELDETPE-------GKWSCPRCVSD 59 (139)
Q Consensus 10 ~~~~~C~vC~~~----g~--ll~Cd--~C~~~~H~~Cl~P~l~~~p~-------~~W~C~~C~~~ 59 (139)
+....|.+|-.. |. ...|+ .|...||..|+...+...+. -.=-||.|...
T Consensus 306 e~~~ECaICys~~l~~g~lPdk~C~n~~C~h~FH~~CL~kWLrs~~~sRqSFnvi~G~CPyCr~p 370 (381)
T 3k1l_B 306 NEELRCNICFAYRLDGGEVPLVSCDNAKCVLKCHAVCLEEWFKTLMDGKTFLEVSFGQCPFCKAK 370 (381)
T ss_dssp CSCCSCSSSCCSSCTTCCCCCBCCSCTTCCCCBCSGGGHHHHHHHHSSSCTTTCCEEECTTTCCE
T ss_pred cCCccCcccceeecCCCCCccccccCCccCCccchHHHHHHHHhCCCccccccccCCCCCCCCCc
Confidence 455679999862 32 35688 89999999999754332211 11359999864
No 85
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=71.57 E-value=0.86 Score=31.61 Aligned_cols=27 Identities=26% Similarity=0.612 Sum_probs=0.0
Q ss_pred cCCCCCcccccCCCCCCCCCCCccccccccC
Q psy14605 29 TCPRAYHLCCLDPELDETPEGKWSCPRCVSD 59 (139)
Q Consensus 29 ~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~~ 59 (139)
.|.-.||..|+.+-+... -.||.|...
T Consensus 83 ~C~H~FH~~CI~~Wl~~~----~~CP~Cr~~ 109 (117)
T 4a0k_B 83 VCNHAFHFHCISRWLKTR----QVCPLDNRE 109 (117)
T ss_dssp -------------------------------
T ss_pred CcCceEcHHHHHHHHHcC----CcCCCCCCe
Confidence 688899999999776542 469999865
No 86
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=70.55 E-value=0.71 Score=29.03 Aligned_cols=53 Identities=17% Similarity=0.244 Sum_probs=33.9
Q ss_pred ccccccccccccccCce----EEeccCCCCCcccccCCCCCCCCCCCccccccccCCC
Q psy14605 8 QTEHQDYCEVCQQGGEI----ILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGP 61 (139)
Q Consensus 8 ~~~~~~~C~vC~~~g~l----l~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~~~~ 61 (139)
.-.....|.+|...-.. ..--.|+-.||..|+...+... .+...||.|.....
T Consensus 11 ~~~~~~~C~IC~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~-~~~~~CP~Cr~~~~ 67 (88)
T 2ct2_A 11 ALREVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASS-INGVRCPFCSKITR 67 (88)
T ss_dssp CCCSCCBCTTTCCBCCTTSSCEEECSSSCEEEHHHHHHHHHHC-SSCBCCTTTCCCBC
T ss_pred hccCCCCCccCCccccccCCCeEECCCCChhhHHHHHHHHHcC-CCCcCCCCCCCccc
Confidence 33555789999975211 2233799899999987443321 23468999987543
No 87
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=69.71 E-value=0.61 Score=29.25 Aligned_cols=47 Identities=17% Similarity=0.290 Sum_probs=31.5
Q ss_pred ccccccccccccCceEEeccCCCCCcccccCCCCCCCCCCCccccccccCC
Q psy14605 10 EHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDG 60 (139)
Q Consensus 10 ~~~~~C~vC~~~g~ll~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~~~ 60 (139)
.....|.+|...-....--.|.-.||..|+...+.. ...||.|....
T Consensus 13 ~~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~~----~~~CP~Cr~~~ 59 (81)
T 2csy_A 13 EIPFRCFICRQAFQNPVVTKCRHYFCESCALEHFRA----TPRCYICDQPT 59 (81)
T ss_dssp CCCSBCSSSCSBCCSEEECTTSCEEEHHHHHHHHHH----CSBCSSSCCBC
T ss_pred CCCCCCcCCCchhcCeeEccCCCHhHHHHHHHHHHC----CCcCCCcCccc
Confidence 445679999875321122478888999998754432 34799998764
No 88
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=68.89 E-value=0.83 Score=28.31 Aligned_cols=51 Identities=22% Similarity=0.561 Sum_probs=32.6
Q ss_pred ccccccccccccC-ceEEeccCCCCCcccccCCCCCCC--CCCCccccccccCCC
Q psy14605 10 EHQDYCEVCQQGG-EIILCDTCPRAYHLCCLDPELDET--PEGKWSCPRCVSDGP 61 (139)
Q Consensus 10 ~~~~~C~vC~~~g-~ll~Cd~C~~~~H~~Cl~P~l~~~--p~~~W~C~~C~~~~~ 61 (139)
..+..|.+|...- +-+. -.|.-.||..|+...+... ..+...||.|.....
T Consensus 17 ~~~~~C~IC~~~~~~p~~-~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~ 70 (85)
T 2ecw_A 17 KEEVTCPICLELLKEPVS-ADCNHSFCRACITLNYESNRNTDGKGNCPVCRVPYP 70 (85)
T ss_dssp CTTTSCTTTCSCCSSCEE-CTTSCCBCHHHHHHHHHHSBCTTSCBCCTTTCCCCC
T ss_pred ccCCCCcCCChhhCccee-CCCCCHHHHHHHHHHHHhccCCCCCCCCCCCCCcCC
Confidence 4456899999752 2222 3588889999986433221 124678999987533
No 89
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=68.17 E-value=0.82 Score=27.56 Aligned_cols=50 Identities=24% Similarity=0.636 Sum_probs=34.9
Q ss_pred cccccccccccccc-------CceEEeccCCCCCcccccCCCCCCCCCCCccccccccCCC
Q psy14605 8 QTEHQDYCEVCQQG-------GEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGP 61 (139)
Q Consensus 8 ~~~~~~~C~vC~~~-------g~ll~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~~~~ 61 (139)
....+..|.+|... +..+..-.|+-.||..|+...+... -.||.|.....
T Consensus 6 ~~~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~----~~CP~Cr~~~~ 62 (71)
T 3ng2_A 6 RPSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNA----NTCPTCRKKIN 62 (71)
T ss_dssp CCTTCCBCTTTCCBHHHHHTTTCCEEECTTSCEEEHHHHHHHHHHC----SBCTTTCCBCC
T ss_pred CCCCCCCCcccChhhhccccccCCeEeCCCCChHhHHHHHHHHHcC----CCCCCCCCccC
Confidence 34556789999973 3445667899999999997543322 37999987543
No 90
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=67.84 E-value=5 Score=24.39 Aligned_cols=50 Identities=22% Similarity=0.410 Sum_probs=33.6
Q ss_pred ccccccccccccC--ceEEeccCCCCCcccccCCCCCCC---CCCCccccccccCCC
Q psy14605 10 EHQDYCEVCQQGG--EIILCDTCPRAYHLCCLDPELDET---PEGKWSCPRCVSDGP 61 (139)
Q Consensus 10 ~~~~~C~vC~~~g--~ll~Cd~C~~~~H~~Cl~P~l~~~---p~~~W~C~~C~~~~~ 61 (139)
..+..|.+|...- ..+ -.|+-.|+..|+...+... ..+.-.||.|.....
T Consensus 10 ~~~~~C~IC~~~~~~p~~--l~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~~ 64 (79)
T 2egp_A 10 QEEVTCPICLELLTEPLS--LDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYS 64 (79)
T ss_dssp CCCCEETTTTEECSSCCC--CSSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCCC
T ss_pred ccCCCCcCCCcccCCeeE--CCCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCcCC
Confidence 3456799999752 222 2688899999998655432 123678999987643
No 91
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=67.58 E-value=0.86 Score=30.87 Aligned_cols=31 Identities=23% Similarity=0.575 Sum_probs=23.3
Q ss_pred EEeccCCCCCcccccCCCCCCCCCCCccccccccC
Q psy14605 25 ILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSD 59 (139)
Q Consensus 25 l~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~~ 59 (139)
+.--.|.-.||..|+.+-+.. .-.||.|...
T Consensus 68 ~~~~~C~H~FH~~Ci~~Wl~~----~~~CP~Cr~~ 98 (106)
T 3dpl_R 68 VAWGVCNHAFHFHCISRWLKT----RQVCPLDNRE 98 (106)
T ss_dssp EEEETTSCEEEHHHHHHHHTT----CSBCSSSCSB
T ss_pred EeecccCcEECHHHHHHHHHc----CCcCcCCCCc
Confidence 333579999999999876554 3479999875
No 92
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=67.07 E-value=3.5 Score=27.34 Aligned_cols=46 Identities=17% Similarity=0.467 Sum_probs=32.7
Q ss_pred ccccccccccccC--ceEEeccCCCCCcccccCCCCCCCCCCCccccccccCC
Q psy14605 10 EHQDYCEVCQQGG--EIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDG 60 (139)
Q Consensus 10 ~~~~~C~vC~~~g--~ll~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~~~ 60 (139)
..+..|.+|...- ...+ .|+-.|+..|+...+. .+...||.|....
T Consensus 13 ~~~~~C~iC~~~~~~p~~~--~CgH~fC~~Ci~~~~~---~~~~~CP~Cr~~~ 60 (115)
T 3l11_A 13 LSECQCGICMEILVEPVTL--PCNHTLCKPCFQSTVE---KASLCCPFCRRRV 60 (115)
T ss_dssp HHHHBCTTTCSBCSSCEEC--TTSCEECHHHHCCCCC---TTTSBCTTTCCBC
T ss_pred CCCCCCccCCcccCceeEc--CCCCHHhHHHHHHHHh---HCcCCCCCCCccc
Confidence 4557899999752 2333 7988999999986543 2357899998753
No 93
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=65.80 E-value=0.78 Score=27.38 Aligned_cols=46 Identities=26% Similarity=0.712 Sum_probs=32.2
Q ss_pred cccccccccccc-------CceEEeccCCCCCcccccCCCCCCCCCCCccccccccC
Q psy14605 10 EHQDYCEVCQQG-------GEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSD 59 (139)
Q Consensus 10 ~~~~~C~vC~~~-------g~ll~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~~ 59 (139)
.....|.+|... +..+.--.|.-.||..|+...+.. .-.||.|...
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~----~~~CP~Cr~~ 65 (69)
T 2ea6_A 13 SGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN----ANTCPTCRKK 65 (69)
T ss_dssp TCCCCCTTTCCCHHHHTTTTCCEEECSSSCEEEHHHHHHHHHH----CSSCTTTCCC
T ss_pred CCCCCCcccCccccccccccCCeEeCCCCChhcHHHHHHHHHc----CCCCCCCCCc
Confidence 455679999974 234456689999999999754332 2369999865
No 94
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=64.92 E-value=0.58 Score=30.85 Aligned_cols=47 Identities=23% Similarity=0.582 Sum_probs=34.3
Q ss_pred ccccccccccc-CceEEeccCCCCCcccccCCCCCCCCCCCccccccccCC
Q psy14605 11 HQDYCEVCQQG-GEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDG 60 (139)
Q Consensus 11 ~~~~C~vC~~~-g~ll~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~~~ 60 (139)
.+..|.+|... .+-+.|-.|+-.||..|+...+... ...||.|....
T Consensus 21 ~~~~C~IC~~~~~~p~~~~~CgH~FC~~Ci~~~~~~~---~~~CP~Cr~~~ 68 (100)
T 3lrq_A 21 EVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQ---RAQCPHCRAPL 68 (100)
T ss_dssp HHTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHHHHT---CSBCTTTCCBC
T ss_pred CCCCCccCCccccCccccCCCCChhhHHHHHHHHHHC---cCCCCCCCCcC
Confidence 34679999985 3556668999999999997543322 25899998764
No 95
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=64.72 E-value=2.3 Score=24.38 Aligned_cols=44 Identities=23% Similarity=0.613 Sum_probs=27.0
Q ss_pred ccccccccccccC--ceEEeccCCCCCcccccCCCCCCCCCCCcccccc
Q psy14605 10 EHQDYCEVCQQGG--EIILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56 (139)
Q Consensus 10 ~~~~~C~vC~~~g--~ll~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C 56 (139)
.....|.+|...- ..+ -.|.-.||..|+...+... ...-.||.|
T Consensus 13 ~~~~~C~IC~~~~~~p~~--~~CgH~fC~~Ci~~~~~~~-~~~~~CP~C 58 (58)
T 2ecj_A 13 QVEASCSVCLEYLKEPVI--IECGHNFCKACITRWWEDL-ERDFPCPVC 58 (58)
T ss_dssp CCCCBCSSSCCBCSSCCC--CSSCCCCCHHHHHHHTTSS-CCSCCCSCC
T ss_pred ccCCCCccCCcccCccEe--CCCCCccCHHHHHHHHHhc-CCCCCCCCC
Confidence 3456799998752 222 2588888888887543321 234567766
No 96
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=64.28 E-value=1 Score=27.25 Aligned_cols=47 Identities=23% Similarity=0.539 Sum_probs=32.5
Q ss_pred ccccccccccccCceEEeccCCCCCcccccCCCCCCCCCCCccccccccCCC
Q psy14605 10 EHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGP 61 (139)
Q Consensus 10 ~~~~~C~vC~~~g~ll~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~~~~ 61 (139)
.....|.+|...-.. .--.|.-.||..|+...+. ....||.|.....
T Consensus 13 ~~~~~C~IC~~~~~~-~~~~CgH~fc~~Ci~~~~~----~~~~CP~Cr~~~~ 59 (70)
T 2ecn_A 13 TDEEECCICMDGRAD-LILPCAHSFCQKCIDKWSD----RHRNCPICRLQMT 59 (70)
T ss_dssp CCCCCCSSSCCSCCS-EEETTTEEECHHHHHHSSC----CCSSCHHHHHCTT
T ss_pred CCCCCCeeCCcCccC-cccCCCCcccHHHHHHHHH----CcCcCCCcCCccc
Confidence 445689999985322 3346888899999976544 3467999986533
No 97
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=63.02 E-value=0.65 Score=27.92 Aligned_cols=46 Identities=17% Similarity=0.501 Sum_probs=31.3
Q ss_pred cccccccccccC-ceEEeccCCCCCcccccCCCCCCCCCCCccccccccCC
Q psy14605 11 HQDYCEVCQQGG-EIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDG 60 (139)
Q Consensus 11 ~~~~C~vC~~~g-~ll~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~~~ 60 (139)
.+..|.+|...- +-...-.|+-.||..|+...+.. ...||.|....
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~C~H~fc~~Ci~~~~~~----~~~CP~Cr~~~ 50 (68)
T 1chc_A 4 VAERCPICLEDPSNYSMALPCLHAFCYVCITRWIRQ----NPTCPLCKVPV 50 (68)
T ss_dssp CCCCCSSCCSCCCSCEEETTTTEEESTTHHHHHHHH----SCSTTTTCCCC
T ss_pred CCCCCeeCCccccCCcEecCCCCeeHHHHHHHHHhC----cCcCcCCChhh
Confidence 345799999863 32345578888999998743322 24799998653
No 98
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=62.72 E-value=1.3 Score=30.74 Aligned_cols=44 Identities=20% Similarity=0.504 Sum_probs=29.1
Q ss_pred ccccccccccCceEEeccCCCCCcccccCCCCCCCCCCCccccccccC
Q psy14605 12 QDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSD 59 (139)
Q Consensus 12 ~~~C~vC~~~g~ll~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~~ 59 (139)
+..|.+|...-.-..--.|+-.||..|+...+.. .-.||.|...
T Consensus 53 ~~~C~iC~~~~~~~~~~~CgH~fc~~Ci~~~~~~----~~~CP~Cr~~ 96 (138)
T 4ayc_A 53 ELQCIICSEYFIEAVTLNCAHSFCSYCINEWMKR----KIECPICRKD 96 (138)
T ss_dssp HSBCTTTCSBCSSEEEETTSCEEEHHHHHHHTTT----CSBCTTTCCB
T ss_pred cCCCcccCcccCCceECCCCCCccHHHHHHHHHc----CCcCCCCCCc
Confidence 3469999985321112268888999998754433 2469999865
No 99
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=62.43 E-value=0.99 Score=32.18 Aligned_cols=47 Identities=19% Similarity=0.480 Sum_probs=33.6
Q ss_pred cccccccccccC-ceEEeccCCCCCcccccCCCCCCCCCCCccccccccCC
Q psy14605 11 HQDYCEVCQQGG-EIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDG 60 (139)
Q Consensus 11 ~~~~C~vC~~~g-~ll~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~~~ 60 (139)
....|.+|...- +-+....|+-.||..|+...+. .+...||.|....
T Consensus 53 ~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~---~~~~~CP~Cr~~~ 100 (165)
T 2ckl_B 53 SELMCPICLDMLKNTMTTKECLHRFCADCIITALR---SGNKECPTCRKKL 100 (165)
T ss_dssp HHHBCTTTSSBCSSEEEETTTCCEEEHHHHHHHHH---TTCCBCTTTCCBC
T ss_pred CCCCCcccChHhhCcCEeCCCCChhHHHHHHHHHH---hCcCCCCCCCCcC
Confidence 345799998853 4455568999999999875443 2346799998764
No 100
>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}
Probab=59.25 E-value=6 Score=25.77 Aligned_cols=11 Identities=45% Similarity=1.356 Sum_probs=9.0
Q ss_pred CCccccccccC
Q psy14605 49 GKWSCPRCVSD 59 (139)
Q Consensus 49 ~~W~C~~C~~~ 59 (139)
.+|.||.|-..
T Consensus 59 ddW~CPvCga~ 69 (81)
T 2kn9_A 59 DDWSCPDCGAA 69 (81)
T ss_dssp TTCCCTTTCCC
T ss_pred CCCcCCCCCCC
Confidence 47999999764
No 101
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=59.21 E-value=2.1 Score=26.11 Aligned_cols=48 Identities=15% Similarity=0.337 Sum_probs=32.6
Q ss_pred ccccccccccccC-ceEEeccCCCCCcccccCCCCCCCCCCCccccccccCCC
Q psy14605 10 EHQDYCEVCQQGG-EIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGP 61 (139)
Q Consensus 10 ~~~~~C~vC~~~g-~ll~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~~~~ 61 (139)
.....|.+|...- +-+.-..|.-.||..|+...+.. .-.||.|.....
T Consensus 13 ~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~----~~~CP~Cr~~~~ 61 (72)
T 2djb_A 13 TPYILCSICKGYLIDATTITECLHTFCKSCIVRHFYY----SNRCPKCNIVVH 61 (72)
T ss_dssp CGGGSCTTTSSCCSSCEECSSSCCEECHHHHHHHHHH----CSSCTTTCCCCC
T ss_pred CCCCCCCCCChHHHCcCEECCCCCHHHHHHHHHHHHc----CCcCCCcCcccC
Confidence 4557899998753 33334578888999998644322 246999987643
No 102
>2k1p_A Zinc finger RAN-binding domain-containing protein 2; ZNF265, RNA binding, ranbp2, RBZ, ZIS, alternative splicing, metal-binding, mRNA processing; NMR {Homo sapiens} PDB: 3g9y_A
Probab=58.32 E-value=6.2 Score=21.12 Aligned_cols=16 Identities=19% Similarity=0.638 Sum_probs=11.6
Q ss_pred CCCCccccccccCCCC
Q psy14605 47 PEGKWSCPRCVSDGPP 62 (139)
Q Consensus 47 p~~~W~C~~C~~~~~~ 62 (139)
..|+|.|+.|-.....
T Consensus 3 ~~gDW~C~~C~~~Nfa 18 (33)
T 2k1p_A 3 SANDWQCKTCSNVNWA 18 (33)
T ss_dssp SSSSCBCSSSCCBCCT
T ss_pred CCCCcccCCCCCcccc
Confidence 3589999999765444
No 103
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=55.50 E-value=1.3 Score=25.92 Aligned_cols=45 Identities=27% Similarity=0.696 Sum_probs=31.3
Q ss_pred cccccccccc-------CceEEeccCCCCCcccccCCCCCCCCCCCccccccccCC
Q psy14605 12 QDYCEVCQQG-------GEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDG 60 (139)
Q Consensus 12 ~~~C~vC~~~-------g~ll~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~~~ 60 (139)
+..|.+|... ++.+..-.|+-.||..|+...+.. .-.||.|....
T Consensus 3 ~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~----~~~CP~Cr~~~ 54 (64)
T 2xeu_A 3 MVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKN----ANTCPTCRKKI 54 (64)
T ss_dssp CCBCTTTCCBHHHHHHTTCCEEEETTSCEEEHHHHHHHHHH----CSBCTTTCCBC
T ss_pred CCCCCccChhhhCccccCCCEEeCCCCCchhHHHHHHHHHc----CCCCCCCCccC
Confidence 4579999873 234455689999999999754332 24799998653
No 104
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=54.00 E-value=2.1 Score=26.30 Aligned_cols=47 Identities=17% Similarity=0.292 Sum_probs=32.1
Q ss_pred ccccccccccccC--ceEEeccCCCCCcccccCCCCCCCCCCCccccccccCCC
Q psy14605 10 EHQDYCEVCQQGG--EIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGP 61 (139)
Q Consensus 10 ~~~~~C~vC~~~g--~ll~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~~~~ 61 (139)
..+..|.+|...- .++. .|+-.|+..|+...+. .+.-.||.|.....
T Consensus 6 ~~~~~C~IC~~~~~~Pv~~--~CgH~fc~~Ci~~~~~---~~~~~CP~C~~~~~ 54 (78)
T 1t1h_A 6 PEYFRCPISLELMKDPVIV--STGQTYERSSIQKWLD---AGHKTCPKSQETLL 54 (78)
T ss_dssp SSSSSCTTTSCCCSSEEEE--TTTEEEEHHHHHHHHT---TTCCBCTTTCCBCS
T ss_pred cccCCCCCccccccCCEEc--CCCCeecHHHHHHHHH---HCcCCCCCCcCCCC
Confidence 4456899999853 2332 6888899999875443 23568999987543
No 105
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=53.75 E-value=1.9 Score=26.55 Aligned_cols=50 Identities=22% Similarity=0.533 Sum_probs=31.5
Q ss_pred ccccccccccccC-c-eEEeccCCCCCcccccCCCCCC--CCCCCccccccccCCC
Q psy14605 10 EHQDYCEVCQQGG-E-IILCDTCPRAYHLCCLDPELDE--TPEGKWSCPRCVSDGP 61 (139)
Q Consensus 10 ~~~~~C~vC~~~g-~-ll~Cd~C~~~~H~~Cl~P~l~~--~p~~~W~C~~C~~~~~ 61 (139)
.....|.+|...- + .++ .|.-.||..|+...+.. ...+.-.||.|.....
T Consensus 17 ~~~~~C~IC~~~~~~p~~~--~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~ 70 (85)
T 2ecv_A 17 KEEVTCPICLELLTQPLSL--DCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQ 70 (85)
T ss_dssp CCCCCCTTTCSCCSSCBCC--SSSCCBCTTHHHHHHHHHHHTTSCCCCTTTCCSSC
T ss_pred cCCCCCCCCCcccCCceeC--CCCCHHHHHHHHHHHHHhhcCCCCCcCCCCCCccC
Confidence 3456799999853 2 222 68888888898643222 0123568999987644
No 106
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=53.72 E-value=1.5 Score=25.93 Aligned_cols=44 Identities=20% Similarity=0.596 Sum_probs=26.7
Q ss_pred ccccccccccccC--ceEEeccCCCCCcccccCCCCCCCCCCCcccccc
Q psy14605 10 EHQDYCEVCQQGG--EIILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56 (139)
Q Consensus 10 ~~~~~C~vC~~~g--~ll~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C 56 (139)
..+..|.+|...- ..++ .|+-.||..|+...+.. ..+.-.||.|
T Consensus 18 ~~~~~C~IC~~~~~~p~~~--~CgH~fC~~Ci~~~~~~-~~~~~~CP~C 63 (63)
T 2ysj_A 18 QEEVICPICLDILQKPVTI--DCGHNFCLKCITQIGET-SCGFFKCPLC 63 (63)
T ss_dssp CCCCBCTTTCSBCSSCEEC--TTSSEECHHHHHHHHHH-CSSCCCCSCC
T ss_pred ccCCCCCcCCchhCCeEEe--CCCCcchHHHHHHHHHc-CCCCCcCcCC
Confidence 4456799998752 2332 78888888887644331 1123467766
No 107
>2lk0_A RNA-binding protein 5; zinc finger; NMR {Homo sapiens} PDB: 2lk1_A*
Probab=53.48 E-value=3 Score=22.27 Aligned_cols=14 Identities=21% Similarity=0.700 Sum_probs=10.5
Q ss_pred CCCccccccccCCC
Q psy14605 48 EGKWSCPRCVSDGP 61 (139)
Q Consensus 48 ~~~W~C~~C~~~~~ 61 (139)
.|+|.|+.|.....
T Consensus 3 ~gDW~C~~C~~~Nf 16 (32)
T 2lk0_A 3 FEDWLCNKCCLNNF 16 (32)
T ss_dssp CSEEECTTTCCEEE
T ss_pred CCCCCcCcCcCCcC
Confidence 38999999965433
No 108
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=53.33 E-value=2.7 Score=28.34 Aligned_cols=49 Identities=24% Similarity=0.387 Sum_probs=32.1
Q ss_pred cccccccccccCceEEeccCCCCCcccccCCCCCCCCCCCccccccccCCCC
Q psy14605 11 HQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPP 62 (139)
Q Consensus 11 ~~~~C~vC~~~g~ll~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~~~~~ 62 (139)
.+..|.+|...-.-..--.|+-.||..|+...+. .+...||.|......
T Consensus 51 ~~~~C~IC~~~~~~p~~~~CgH~fC~~Ci~~~~~---~~~~~CP~Cr~~~~~ 99 (124)
T 3fl2_A 51 ETFQCICCQELVFRPITTVCQHNVCKDCLDRSFR---AQVFSCPACRYDLGR 99 (124)
T ss_dssp HHTBCTTTSSBCSSEEECTTSCEEEHHHHHHHHH---TTCCBCTTTCCBCCT
T ss_pred cCCCCCcCChHHcCcEEeeCCCcccHHHHHHHHh---HCcCCCCCCCccCCC
Confidence 3457999997532111127888899999875443 234589999976544
No 109
>1v5n_A PDI-like hypothetical protein AT1G60420; DC1 domain, zinc binding domain, PDI-like protein, structural genomics; NMR {Arabidopsis thaliana} SCOP: g.49.1.3
Probab=53.23 E-value=5.1 Score=26.17 Aligned_cols=30 Identities=27% Similarity=0.480 Sum_probs=24.6
Q ss_pred ccccccccc--CceEEeccCCCCCcccccCCC
Q psy14605 13 DYCEVCQQG--GEIILCDTCPRAYHLCCLDPE 42 (139)
Q Consensus 13 ~~C~vC~~~--g~ll~Cd~C~~~~H~~Cl~P~ 42 (139)
-.|.+|+.. +..-.|..|+-..|+.|+..|
T Consensus 48 ~~C~~C~~~~~~~~Y~C~~C~f~lH~~Ca~~p 79 (89)
T 1v5n_A 48 YTCDKCEEEGTIWSYHCDECDFDLHAKCALNE 79 (89)
T ss_dssp CCCTTTSCCCCSCEEECTTTCCCCCHHHHHCS
T ss_pred eEeCCCCCcCCCcEEEcCCCCCeEcHHhcCCC
Confidence 469999985 457789999999999998744
No 110
>2hf1_A Tetraacyldisaccharide-1-P 4-kinase; LPXK, lipid A biosynthes structural genomics, PSI-2, protein structure initiative; 1.90A {Chromobacterium violaceum} SCOP: b.171.1.1
Probab=52.49 E-value=5 Score=25.17 Aligned_cols=22 Identities=18% Similarity=0.526 Sum_probs=14.9
Q ss_pred ccccccccc------CceEEeccCCCCC
Q psy14605 13 DYCEVCQQG------GEIILCDTCPRAY 34 (139)
Q Consensus 13 ~~C~vC~~~------g~ll~Cd~C~~~~ 34 (139)
-.|++|+.+ ...+.|..|+.+|
T Consensus 9 L~CP~ck~~L~~~~~~~~LiC~~cg~~Y 36 (68)
T 2hf1_A 9 LVCPLCKGPLVFDKSKDELICKGDRLAF 36 (68)
T ss_dssp CBCTTTCCBCEEETTTTEEEETTTTEEE
T ss_pred eECCCCCCcCeEeCCCCEEEcCCCCcEe
Confidence 468888863 2456677777777
No 111
>2js4_A UPF0434 protein BB2007; NESG, northeast structural genomics consortium, beta, PSI-2, protein structure initiative; NMR {Bordetella bronchiseptica RB50}
Probab=51.67 E-value=5.2 Score=25.22 Aligned_cols=24 Identities=21% Similarity=0.469 Sum_probs=17.1
Q ss_pred cccccccccc------CceEEeccCCCCCc
Q psy14605 12 QDYCEVCQQG------GEIILCDTCPRAYH 35 (139)
Q Consensus 12 ~~~C~vC~~~------g~ll~Cd~C~~~~H 35 (139)
--.|++|+.+ ...+.|..|+.+|=
T Consensus 8 iL~CP~ck~~L~~~~~~~~LiC~~cg~~YP 37 (70)
T 2js4_A 8 ILVCPVCKGRLEFQRAQAELVCNADRLAFP 37 (70)
T ss_dssp CCBCTTTCCBEEEETTTTEEEETTTTEEEE
T ss_pred heECCCCCCcCEEeCCCCEEEcCCCCceec
Confidence 3579999874 24667888888873
No 112
>2jr6_A UPF0434 protein NMA0874; solution, structural genomics, PSI, structure initiative, northeast structural genomics consort NESG; NMR {Neisseria meningitidis}
Probab=51.38 E-value=5.1 Score=25.11 Aligned_cols=22 Identities=18% Similarity=0.244 Sum_probs=15.1
Q ss_pred ccccccccc------CceEEeccCCCCC
Q psy14605 13 DYCEVCQQG------GEIILCDTCPRAY 34 (139)
Q Consensus 13 ~~C~vC~~~------g~ll~Cd~C~~~~ 34 (139)
-.|++|+.+ ...+.|..|..+|
T Consensus 9 L~CP~ck~~L~~~~~~~~LiC~~cg~~Y 36 (68)
T 2jr6_A 9 LVCPVTKGRLEYHQDKQELWSRQAKLAY 36 (68)
T ss_dssp CBCSSSCCBCEEETTTTEEEETTTTEEE
T ss_pred eECCCCCCcCeEeCCCCEEEcCCCCcEe
Confidence 478888863 2456677777777
No 113
>2pk7_A Uncharacterized protein; NESG, PLR1, putative tetraacyldisaccharide-1-P 4-kinase, Q4K structural genomics, PSI-2; 2.20A {Pseudomonas fluorescens} SCOP: b.171.1.1
Probab=51.11 E-value=5.3 Score=25.11 Aligned_cols=22 Identities=18% Similarity=0.401 Sum_probs=14.8
Q ss_pred ccccccccc------CceEEeccCCCCC
Q psy14605 13 DYCEVCQQG------GEIILCDTCPRAY 34 (139)
Q Consensus 13 ~~C~vC~~~------g~ll~Cd~C~~~~ 34 (139)
-.|++|+++ ...+.|..|..+|
T Consensus 9 L~CP~ck~~L~~~~~~~~LiC~~cg~~Y 36 (69)
T 2pk7_A 9 LACPICKGPLKLSADKTELISKGAGLAY 36 (69)
T ss_dssp CCCTTTCCCCEECTTSSEEEETTTTEEE
T ss_pred eeCCCCCCcCeEeCCCCEEEcCCCCcEe
Confidence 468888863 2355677777776
No 114
>2jny_A Uncharacterized BCR; structure, CGR1, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Corynebacterium glutamicum} SCOP: b.171.1.1
Probab=51.09 E-value=5.4 Score=24.97 Aligned_cols=24 Identities=13% Similarity=0.175 Sum_probs=17.3
Q ss_pred cccccccccc------CceEEeccCCCCCc
Q psy14605 12 QDYCEVCQQG------GEIILCDTCPRAYH 35 (139)
Q Consensus 12 ~~~C~vC~~~------g~ll~Cd~C~~~~H 35 (139)
--.|++|+.+ ..-+.|..|..+|=
T Consensus 10 iL~CP~ck~~L~~~~~~g~LvC~~c~~~YP 39 (67)
T 2jny_A 10 VLACPKDKGPLRYLESEQLLVNERLNLAYR 39 (67)
T ss_dssp CCBCTTTCCBCEEETTTTEEEETTTTEEEE
T ss_pred HhCCCCCCCcCeEeCCCCEEEcCCCCcccc
Confidence 3579999974 24567888888873
No 115
>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A
Probab=49.90 E-value=20 Score=21.06 Aligned_cols=11 Identities=36% Similarity=1.295 Sum_probs=9.1
Q ss_pred CCccccccccC
Q psy14605 49 GKWSCPRCVSD 59 (139)
Q Consensus 49 ~~W~C~~C~~~ 59 (139)
.+|.||.|-..
T Consensus 35 ~dw~CP~Cg~~ 45 (52)
T 1e8j_A 35 DDWACPVCGAS 45 (52)
T ss_dssp TTCCCSSSCCC
T ss_pred CCCcCCCCCCc
Confidence 47999999764
No 116
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=49.66 E-value=3.8 Score=26.93 Aligned_cols=48 Identities=17% Similarity=0.317 Sum_probs=33.3
Q ss_pred ccccccccccccC-ceEEeccCCCCCcccccCCCCCCCCCCCccccccccCCC
Q psy14605 10 EHQDYCEVCQQGG-EIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGP 61 (139)
Q Consensus 10 ~~~~~C~vC~~~g-~ll~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~~~~ 61 (139)
..+..|.+|...- +-+....|+-.||..|+...+.. .-.||.|.....
T Consensus 13 ~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~----~~~CP~Cr~~~~ 61 (108)
T 2ckl_A 13 NPHLMCVLCGGYFIDATTIIECLHSFCKTCIVRYLET----SKYCPICDVQVH 61 (108)
T ss_dssp GGGTBCTTTSSBCSSEEEETTTCCEEEHHHHHHHHTS----CSBCTTTCCBSC
T ss_pred CCcCCCccCChHHhCcCEeCCCCChhhHHHHHHHHHh----CCcCcCCCcccc
Confidence 4456799999753 34444589999999998754432 257999987643
No 117
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=49.12 E-value=5.6 Score=25.89 Aligned_cols=48 Identities=21% Similarity=0.465 Sum_probs=31.6
Q ss_pred ccccccccccC--ceEEeccCCCCCcccccCCCCCCCCCCCccccccccCCCC
Q psy14605 12 QDYCEVCQQGG--EIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPP 62 (139)
Q Consensus 12 ~~~C~vC~~~g--~ll~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~~~~~ 62 (139)
...|.+|...- ..+ -.|+-.||..|+...+... .+...||.|......
T Consensus 21 ~~~C~IC~~~~~~p~~--~~CgH~fC~~Ci~~~~~~~-~~~~~CP~Cr~~~~~ 70 (112)
T 1jm7_A 21 ILECPICLELIKEPVS--TKCDHIFCKFCMLKLLNQK-KGPSQCPLCKNDITK 70 (112)
T ss_dssp HTSCSSSCCCCSSCCB--CTTSCCCCSHHHHHHHHSS-SSSCCCTTTSCCCCT
T ss_pred CCCCcccChhhcCeEE--CCCCCHHHHHHHHHHHHhC-CCCCCCcCCCCcCCH
Confidence 45799998752 222 2688899999987443322 244689999875443
No 118
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=48.61 E-value=1.5 Score=29.38 Aligned_cols=47 Identities=26% Similarity=0.672 Sum_probs=33.0
Q ss_pred cccccccccccc-------CceEEeccCCCCCcccccCCCCCCCCCCCccccccccCC
Q psy14605 10 EHQDYCEVCQQG-------GEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDG 60 (139)
Q Consensus 10 ~~~~~C~vC~~~-------g~ll~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~~~ 60 (139)
+....|.+|... +..+..-.|+-.||..|+.+.+... ..||.|....
T Consensus 70 ~~~~~C~iC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~----~~CP~Cr~~~ 123 (133)
T 4ap4_A 70 SGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNA----NTCPTCRKKI 123 (133)
T ss_dssp SSSCBCTTTCCBHHHHHHTTCCEEEETTSBEEEHHHHHHHHHHC----SBCTTTCCBC
T ss_pred CCCCCCCCCCCccccccccCcceEeCCCCChhhHHHHHHHHHcC----CCCCCCCCcC
Confidence 445678888763 2344566899999999998655432 4899998653
No 119
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=47.39 E-value=8.5 Score=25.59 Aligned_cols=43 Identities=19% Similarity=0.428 Sum_probs=28.9
Q ss_pred ccccccccccC-ceEEeccCCCCCcccccCCCCCCCCCCCccccccccCC
Q psy14605 12 QDYCEVCQQGG-EIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDG 60 (139)
Q Consensus 12 ~~~C~vC~~~g-~ll~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~~~ 60 (139)
...|.+|...- +-+.-..|+-.|+..|+...+. -.||.|....
T Consensus 22 ~~~C~IC~~~~~~pv~~~~CgH~fC~~Ci~~~~~------~~CP~Cr~~~ 65 (117)
T 1jm7_B 22 LLRCSRCTNILREPVCLGGCEHIFCSNCVSDCIG------TGCPVCYTPA 65 (117)
T ss_dssp TTSCSSSCSCCSSCBCCCSSSCCBCTTTGGGGTT------TBCSSSCCBC
T ss_pred CCCCCCCChHhhCccEeCCCCCHHHHHHHHHHhc------CCCcCCCCcC
Confidence 45799999753 2222226888888888875443 4799998764
No 120
>2a20_A Regulating synaptic membrane exocytosis protein 2; zinc-finger domain, metal binding protein; NMR {Rattus norvegicus} PDB: 2cjs_C
Probab=44.74 E-value=3.3 Score=25.66 Aligned_cols=50 Identities=18% Similarity=0.440 Sum_probs=31.0
Q ss_pred ccccccccccccc----CceEEeccCCCCCcccccCCCCCCCCCCCcccccccc
Q psy14605 9 TEHQDYCEVCQQG----GEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVS 58 (139)
Q Consensus 9 ~~~~~~C~vC~~~----g~ll~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~ 58 (139)
.+....|.+|.+. |---.|..|..-+--.|-+---.....-.|.|..|.+
T Consensus 6 ~~d~~~C~iC~KTKFADG~Gh~C~yCk~r~CaRCGg~v~lr~~k~~WvC~lC~k 59 (62)
T 2a20_A 6 KGDAPTCGICHKTKFADGCGHNCSYCQTKFCARCGGRVSLRSNKVMWVCNLCRK 59 (62)
T ss_dssp SSCCCCCSSSSCSCCCSSCCEEBTTTCCEECTTSEEEEESSTTCEEEEEHHHHH
T ss_pred cCCcchhhhhccceeccCCCccccccCCeeecccCCEeeecCCeEEEEehhhhh
Confidence 3455789999984 4445577777766666654211122334799999975
No 121
>2yqp_A Probable ATP-dependent RNA helicase DDX59; structure genomics, ZF-HIT domain, DEAD box polypeptide 59 isoform 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=44.72 E-value=11 Score=23.14 Aligned_cols=24 Identities=33% Similarity=0.508 Sum_probs=18.4
Q ss_pred CCCCCCccccccccccccccCceE
Q psy14605 2 SHIQDLQTEHQDYCEVCQQGGEII 25 (139)
Q Consensus 2 s~~d~~~~~~~~~C~vC~~~g~ll 25 (139)
|-.+.+....+.+|.+|+.-|..|
T Consensus 9 sk~Qr~p~pgePvCvvCGryGeYI 32 (60)
T 2yqp_A 9 SKTQRWAEPGEPICVVCGRYGEYI 32 (60)
T ss_dssp CCCCCCCCTTSCCCSSSSSCCSEE
T ss_pred hhhhcCCCCCCceEEEecCcccee
Confidence 345667777788999999988765
No 122
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=44.32 E-value=9.8 Score=23.93 Aligned_cols=49 Identities=24% Similarity=0.476 Sum_probs=31.4
Q ss_pred ccccccccccccCc-----eEEeccCCCCCcccccCCCCCCCCCCCccccccccCCCC
Q psy14605 10 EHQDYCEVCQQGGE-----IILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPP 62 (139)
Q Consensus 10 ~~~~~C~vC~~~g~-----ll~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~~~~~ 62 (139)
..+..|.||...-. ++.| .|+-.|+..|+...+. .+...||.|......
T Consensus 9 ~~~~~CpICle~~~~~d~~~~p~-~CGH~fC~~Cl~~~~~---~~~~~CP~CR~~~~~ 62 (78)
T 1e4u_A 9 EDPVECPLCMEPLEIDDINFFPC-TCGYQICRFCWHRIRT---DENGLCPACRKPYPE 62 (78)
T ss_dssp CCCCBCTTTCCBCCTTTTTCCSS-TTSCCCCHHHHHHHTT---SSCSBCTTTCCBCSS
T ss_pred ccCCcCCccCccCcccccccccc-CCCCCcCHHHHHHHHh---cCCCCCCCCCCccCC
Confidence 34567999998421 1112 4888888888764332 245789999876443
No 123
>1yk4_A Rubredoxin, RD; electron transport; 0.69A {Pyrococcus abyssi} PDB: 2pya_A 1yk5_A 1bq8_A 1bq9_A* 3kyu_A 3kyv_A 3kyw_A 3kyx_A 3kyy_A 3ryg_A 3rz6_A 3rzt_A 3ss2_A 1brf_A 1caa_A 1cad_A 1vcx_A 1zrp_A 1iu5_A 1iu6_A ...
Probab=44.10 E-value=11 Score=22.28 Aligned_cols=11 Identities=36% Similarity=1.189 Sum_probs=9.0
Q ss_pred CCccccccccC
Q psy14605 49 GKWSCPRCVSD 59 (139)
Q Consensus 49 ~~W~C~~C~~~ 59 (139)
.+|.||.|-..
T Consensus 34 ~dw~CP~Cg~~ 44 (52)
T 1yk4_A 34 DDWVCPLCGAP 44 (52)
T ss_dssp TTCBCTTTCCB
T ss_pred CCCcCCCCCCC
Confidence 47999999764
No 124
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=43.84 E-value=12 Score=21.72 Aligned_cols=33 Identities=30% Similarity=0.836 Sum_probs=17.0
Q ss_pred EeccCCCCCcccccCC-CCCCCCCCCccccccccC
Q psy14605 26 LCDTCPRAYHLCCLDP-ELDETPEGKWSCPRCVSD 59 (139)
Q Consensus 26 ~Cd~C~~~~H~~Cl~P-~l~~~p~~~W~C~~C~~~ 59 (139)
.|..|+-.|...=-+| +...+| .+|.||.|-..
T Consensus 6 ~C~vCGyvyd~~~Gd~t~f~~lP-~dw~CP~Cg~~ 39 (46)
T 6rxn_A 6 VCNVCGYEYDPAEHDNVPFDQLP-DDWCCPVCGVS 39 (46)
T ss_dssp EETTTCCEECGGGGTTCCGGGSC-TTCBCTTTCCB
T ss_pred ECCCCCeEEeCCcCCCcchhhCC-CCCcCcCCCCc
Confidence 4555554443221111 122343 46999999754
No 125
>2fiy_A Protein FDHE homolog; FDHE protein, structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pseudomonas aeruginosa} SCOP: e.59.1.1
Probab=43.62 E-value=10 Score=30.39 Aligned_cols=27 Identities=26% Similarity=0.771 Sum_probs=20.5
Q ss_pred cccccccccccc---------C-----ceEEeccCCCCCcc
Q psy14605 10 EHQDYCEVCQQG---------G-----EIILCDTCPRAYHL 36 (139)
Q Consensus 10 ~~~~~C~vC~~~---------g-----~ll~Cd~C~~~~H~ 36 (139)
....+|+||+.. | ..+.|..|...||+
T Consensus 180 ~~~~~CPvCGs~P~~s~l~~~g~~~G~R~l~Cs~C~t~W~~ 220 (309)
T 2fiy_A 180 ESRTLCPACGSPPMAGMIRQGGKETGLRYLSCSLCACEWHY 220 (309)
T ss_dssp TTCSSCTTTCCCEEEEEEEC----CCEEEEEETTTCCEEEC
T ss_pred ccCCCCCCCCCcCceeEEeecCCCCCcEEEEeCCCCCEEee
Confidence 456799999962 1 37889999998874
No 126
>2zet_C Melanophilin; complex, GTP-binding protein, GTPase, G-protein, RAB, RAB27B, effector, SLP homology domain, acetylation, lipoprotein, membrane; HET: GTP; 3.00A {Mus musculus}
Probab=43.50 E-value=11 Score=27.18 Aligned_cols=47 Identities=21% Similarity=0.449 Sum_probs=33.8
Q ss_pred cccccccccccc-----CceEEeccCCCCCcccccCCCCCCCCCCCccccccccC
Q psy14605 10 EHQDYCEVCQQG-----GEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSD 59 (139)
Q Consensus 10 ~~~~~C~vC~~~-----g~ll~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~~ 59 (139)
.++..|..|..+ +.-..|..|..-+-..|-. ...+...|.|..|...
T Consensus 66 ~~~~~C~~C~~~fg~l~~~g~~C~~C~~~VC~~C~~---~~~~~~~W~C~vC~k~ 117 (153)
T 2zet_C 66 LNETHCARCLQPYRLLLNSRRQCLECSLFVCKSCSH---AHPEEQGWLCDPCHLA 117 (153)
T ss_dssp GGGTBCTTTCCBGGGCSSCCEECTTTCCEECGGGEE---CCSSSSSCEEHHHHHH
T ss_pred CCCccchhhcCccccccCCCCcCCCCCchhhccccc---ccCCCCcEeeHHHHHH
Confidence 456789999986 3456788887777677763 1224578999999864
No 127
>4b2u_A S67; toxin, ICK; NMR {Sicarius dolichocephalus}
Probab=43.36 E-value=5 Score=21.66 Aligned_cols=13 Identities=54% Similarity=1.605 Sum_probs=10.7
Q ss_pred CCCccccccccCC
Q psy14605 48 EGKWSCPRCVSDG 60 (139)
Q Consensus 48 ~~~W~C~~C~~~~ 60 (139)
.|+|.|..|+..+
T Consensus 16 egdwcchkcvpeg 28 (36)
T 4b2u_A 16 EGDWCCHKCVPEG 28 (36)
T ss_dssp GCCSSSSEEEEET
T ss_pred ccCeeeecccccC
Confidence 5899999998654
No 128
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=42.95 E-value=4 Score=26.28 Aligned_cols=46 Identities=22% Similarity=0.438 Sum_probs=31.4
Q ss_pred ccccccccccC-ceEEeccCCCCCcccccCCCCCCCCCCCccccccccCCC
Q psy14605 12 QDYCEVCQQGG-EIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGP 61 (139)
Q Consensus 12 ~~~C~vC~~~g-~ll~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~~~~ 61 (139)
...|.+|...- +-+..-.|+-.||..|+...+.. .-.||.|.....
T Consensus 22 ~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~----~~~CP~Cr~~~~ 68 (99)
T 2y43_A 22 LLRCGICFEYFNIAMIIPQCSHNYCSLCIRKFLSY----KTQCPTCCVTVT 68 (99)
T ss_dssp HTBCTTTCSBCSSEEECTTTCCEEEHHHHHHHHTT----CCBCTTTCCBCC
T ss_pred CCCcccCChhhCCcCEECCCCCHhhHHHHHHHHHC----CCCCCCCCCcCC
Confidence 46799999853 33333478889999998754432 247999987543
No 129
>2lx0_A Membrane fusion protein P14; membrane fusion protein transmembrane domain, P14 fast prote ARCH, micelle-peptide complex, membrane protein; NMR {Synthetic}
Probab=42.51 E-value=11 Score=19.85 Aligned_cols=18 Identities=33% Similarity=0.508 Sum_probs=15.3
Q ss_pred HHHHHHHHHHHHHHhccC
Q psy14605 120 IYGQMARQILLALFLGTG 137 (139)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~ 137 (139)
.|+.||.-|-.-+||+-|
T Consensus 5 iweviaglvalltflafg 22 (32)
T 2lx0_A 5 IWEVIAGLVALLTFLAFG 22 (32)
T ss_dssp SHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 699999999998888654
No 130
>1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: g.50.1.1
Probab=38.84 E-value=10 Score=26.71 Aligned_cols=50 Identities=18% Similarity=0.604 Sum_probs=33.4
Q ss_pred cccccccccccc-----CceEEeccCCCCCcccccCCCCCCCCCCCccccccccC
Q psy14605 10 EHQDYCEVCQQG-----GEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSD 59 (139)
Q Consensus 10 ~~~~~C~vC~~~-----g~ll~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~~ 59 (139)
.++..|.+|..+ +.-..|..|..-+-..|-.-.........|.|..|.+.
T Consensus 53 ~~~~~C~~C~~~~g~l~~~g~~C~~C~~~VC~~C~~~~~~~~~~~~W~C~vC~k~ 107 (134)
T 1zbd_B 53 DGVNRCILCGEQLGMLGSASVVCEDCKKNVCTKCGVETSNNRPHPVWLCKICLEQ 107 (134)
T ss_dssp CSSSBCSSSCCBCSTTSCCEEECTTTCCEEETTSEEECCCSSSSCCEEEHHHHHH
T ss_pred CCCccccccCCCcccccCCCCCCCCCCcccccccCCccCCCCCccceechhhHHH
Confidence 355689999985 23567888877777777653212223457999999863
No 131
>1pft_A TFIIB, PFTFIIBN; N-terminal domain, transcription initiation factor; NMR {Pyrococcus furiosus} SCOP: g.41.3.1
Probab=37.63 E-value=22 Score=20.20 Aligned_cols=24 Identities=21% Similarity=0.585 Sum_probs=16.2
Q ss_pred ccccccccc-------CceEEeccCCCCCcc
Q psy14605 13 DYCEVCQQG-------GEIILCDTCPRAYHL 36 (139)
Q Consensus 13 ~~C~vC~~~-------g~ll~Cd~C~~~~H~ 36 (139)
..|+.|+.. ...+.|..|+.+|-.
T Consensus 6 ~~CP~C~~~~l~~d~~~gelvC~~CG~v~~e 36 (50)
T 1pft_A 6 KVCPACESAELIYDPERGEIVCAKCGYVIEE 36 (50)
T ss_dssp CSCTTTSCCCEEEETTTTEEEESSSCCBCCC
T ss_pred EeCcCCCCcceEEcCCCCeEECcccCCcccc
Confidence 468888761 135678888887743
No 132
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=37.48 E-value=5.2 Score=26.73 Aligned_cols=48 Identities=27% Similarity=0.692 Sum_probs=35.3
Q ss_pred cccccccccccc------C-ceEEeccCCCCCcccccCCCCCCCCCCCccccccccCC
Q psy14605 10 EHQDYCEVCQQG------G-EIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDG 60 (139)
Q Consensus 10 ~~~~~C~vC~~~------g-~ll~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~~~ 60 (139)
.+..+|.+|++. | -.+.|..|....--.|+. .....|.-.||.|....
T Consensus 14 ~~~qiCqiCGD~VG~~~~Ge~FVAC~eC~FPvCrpCyE---YErkeG~q~CpqCktrY 68 (93)
T 1weo_A 14 LDGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYE---YERREGTQNCPQCKTRY 68 (93)
T ss_dssp CSSCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHH---HHHHTSCSSCTTTCCCC
T ss_pred cCCCccccccCccccCCCCCEEEeeeccCChhhHHHHH---HHHhccCccccccCCcc
Confidence 455799999984 3 478899998777777775 22345778899997654
No 133
>2enn_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=36.27 E-value=16 Score=22.82 Aligned_cols=29 Identities=31% Similarity=0.754 Sum_probs=24.0
Q ss_pred ccccccccc-----CceEEeccCCCCCcccccCC
Q psy14605 13 DYCEVCQQG-----GEIILCDTCPRAYHLCCLDP 41 (139)
Q Consensus 13 ~~C~vC~~~-----g~ll~Cd~C~~~~H~~Cl~P 41 (139)
.+|.+|++- -+-+.|..|....|..|+..
T Consensus 35 t~C~~C~~~lwGl~kqG~~C~~C~~~~Hk~C~~~ 68 (77)
T 2enn_A 35 TFCSVCHEFVWGLNKQGYQCRQCNAAIHKKCIDK 68 (77)
T ss_dssp EECSSSCCEECCTTCCEEECSSSCCEEESGGGSS
T ss_pred cCccccChhhccccccccCcCCCCCcCCHhHHhh
Confidence 579999873 25788999999999999873
No 134
>1faq_A RAF-1; transferase, serine/threonine-protein kinase, proto- oncogene, zinc, ATP-binding, phorbol-ester binding; NMR {Homo sapiens} SCOP: g.49.1.1 PDB: 1far_A
Probab=35.68 E-value=24 Score=19.96 Aligned_cols=28 Identities=29% Similarity=0.743 Sum_probs=23.1
Q ss_pred ccccccccc-CceEEeccCCCCCcccccC
Q psy14605 13 DYCEVCQQG-GEIILCDTCPRAYHLCCLD 40 (139)
Q Consensus 13 ~~C~vC~~~-g~ll~Cd~C~~~~H~~Cl~ 40 (139)
.+|..|++- -+-+.|..|....|..|..
T Consensus 15 t~C~~C~~~l~qG~~C~~C~~~~H~~C~~ 43 (52)
T 1faq_A 15 AFCDICQKFLLNGFRCQTCGYKFHEHCST 43 (52)
T ss_dssp EECTTSSSEECSEEECTTTTCCBCSTTSS
T ss_pred cCCCCcccccccCCEeCCCCCeEChhHHh
Confidence 578888763 2567899999999999987
No 135
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=35.57 E-value=7.9 Score=22.76 Aligned_cols=47 Identities=19% Similarity=0.533 Sum_probs=30.5
Q ss_pred cccccccccc---Cc-e-EEeccCCCCCcccccCCCCCCCCCCCccccccccCCC
Q psy14605 12 QDYCEVCQQG---GE-I-ILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGP 61 (139)
Q Consensus 12 ~~~C~vC~~~---g~-l-l~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~~~~ 61 (139)
+..|.+|... +. . +.--.|+-.|+..|+...+.. +.-.||.|.....
T Consensus 3 ~~~C~IC~~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~---~~~~CP~Cr~~~~ 54 (65)
T 1g25_A 3 DQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVR---GAGNCPECGTPLR 54 (65)
T ss_dssp TTCCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHHHHHT---TSSSCTTTCCCCS
T ss_pred CCcCCcCCCCccCCCccCeecCCCCCHhHHHHHHHHHHc---CCCcCCCCCCccc
Confidence 4579999982 22 1 122479999999998743221 3457999987643
No 136
>4cpa_I Metallocarboxypeptidase inhibitor; hydrolase (C-terminal peptidase); 2.50A {Solanum tuberosum} SCOP: g.3.2.1 PDB: 1h20_A
Probab=35.35 E-value=21 Score=19.65 Aligned_cols=13 Identities=31% Similarity=0.915 Sum_probs=10.0
Q ss_pred CCCCccccccccC
Q psy14605 47 PEGKWSCPRCVSD 59 (139)
Q Consensus 47 p~~~W~C~~C~~~ 59 (139)
-++.|+|..|...
T Consensus 18 CS~gw~CqaC~nf 30 (38)
T 4cpa_I 18 CSGAWFCQACWNS 30 (38)
T ss_dssp SCCCSSCCEEETT
T ss_pred cccchHHHHHHhh
Confidence 3578999999753
No 137
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=34.87 E-value=4.8 Score=25.43 Aligned_cols=49 Identities=20% Similarity=0.554 Sum_probs=31.4
Q ss_pred ccccccccccccC-ceEEeccCCCCCcccccCCCCCCCCCCCccccccccCC
Q psy14605 10 EHQDYCEVCQQGG-EIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDG 60 (139)
Q Consensus 10 ~~~~~C~vC~~~g-~ll~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~~~ 60 (139)
..+..|.+|...- +-+.-..|+-.|+..|+...+.. .+...||.|....
T Consensus 11 ~~~~~C~IC~~~~~~p~~~~~CgH~fC~~Ci~~~~~~--~~~~~CP~Cr~~~ 60 (92)
T 3ztg_A 11 PDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLE--SDEHTCPTCHQND 60 (92)
T ss_dssp CTTTEETTTTEECSSCEECTTTCCEECHHHHHHHHHH--CTTCCCTTTCCSS
T ss_pred CcCCCCCCCChhhcCceECCCCCCHHHHHHHHHHHHh--cCCCcCcCCCCcC
Confidence 4557899999742 22222348888888888643321 1346899999764
No 138
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=34.55 E-value=5.1 Score=28.32 Aligned_cols=48 Identities=23% Similarity=0.385 Sum_probs=31.5
Q ss_pred ccccccccccCceEEeccCCCCCcccccCCCCCCCCCCCccccccccCCCC
Q psy14605 12 QDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPP 62 (139)
Q Consensus 12 ~~~C~vC~~~g~ll~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~~~~~ 62 (139)
...|.+|...-.-..--.|+-.|+..|+...+.. +...||.|......
T Consensus 78 ~~~C~IC~~~~~~pv~~~CgH~fC~~Ci~~~~~~---~~~~CP~Cr~~~~~ 125 (150)
T 1z6u_A 78 SFMCVCCQELVYQPVTTECFHNVCKDCLQRSFKA---QVFSCPACRHDLGQ 125 (150)
T ss_dssp HTBCTTTSSBCSSEEECTTSCEEEHHHHHHHHHT---TCCBCTTTCCBCCT
T ss_pred CCEeecCChhhcCCEEcCCCCchhHHHHHHHHHh---CCCcCCCCCccCCC
Confidence 4579999975321111478888899998654432 34579999876544
No 139
>2enz_A NPKC-theta, protein kinase C theta type; zinc binding, DAG/PE-binding protein, diacylglycerol, phorbol ester, TCR, T-cell, structural genomics; NMR {Homo sapiens}
Probab=33.96 E-value=22 Score=21.32 Aligned_cols=28 Identities=32% Similarity=0.764 Sum_probs=23.5
Q ss_pred ccccccccc--C---ceEEeccCCCCCcccccC
Q psy14605 13 DYCEVCQQG--G---EIILCDTCPRAYHLCCLD 40 (139)
Q Consensus 13 ~~C~vC~~~--g---~ll~Cd~C~~~~H~~Cl~ 40 (139)
.+|..|++- | +-+.|..|....|..|+.
T Consensus 24 t~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~ 56 (65)
T 2enz_A 24 TFCEHCGTLLWGLARQGLKCDACGMNVHHRCQT 56 (65)
T ss_dssp CBCSSSCCBCCCSSSCSEEESSSCCEECTTTTT
T ss_pred cCchhcChhheecCCcccccCCCCCccCHhHHh
Confidence 579999873 2 577899999999999987
No 140
>4b2v_A S64; toxin, ICK; NMR {Sicarius dolichocephalus}
Probab=33.23 E-value=21 Score=18.68 Aligned_cols=12 Identities=42% Similarity=1.403 Sum_probs=9.7
Q ss_pred CCCccccccccC
Q psy14605 48 EGKWSCPRCVSD 59 (139)
Q Consensus 48 ~~~W~C~~C~~~ 59 (139)
.|+|.|-.|+.+
T Consensus 16 mgdwccgrcirn 27 (32)
T 4b2v_A 16 MGDWCCGRCIRN 27 (32)
T ss_dssp TCCCCSSEEETT
T ss_pred hcchhhhHHHHh
Confidence 378999999754
No 141
>1n0z_A ZNF265; zinc finger, RNA splicing, transcription; NMR {Homo sapiens} SCOP: g.41.11.1
Probab=32.34 E-value=43 Score=19.00 Aligned_cols=17 Identities=29% Similarity=0.931 Sum_probs=11.9
Q ss_pred CCCCCcccc--ccccCCCC
Q psy14605 46 TPEGKWSCP--RCVSDGPP 62 (139)
Q Consensus 46 ~p~~~W~C~--~C~~~~~~ 62 (139)
...|+|.|+ .|-.....
T Consensus 10 ~~~GDW~C~~~~C~~~Nfa 28 (45)
T 1n0z_A 10 VSDGDWICPDKKCGNVNFA 28 (45)
T ss_dssp SCSSSCBCSSTTTCCBCCS
T ss_pred CCCCCcCCCCCCCCCEEcc
Confidence 346899999 78765444
No 142
>2yuu_A NPKC-delta, protein kinase C delta type; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=31.97 E-value=22 Score=22.41 Aligned_cols=28 Identities=36% Similarity=0.867 Sum_probs=23.6
Q ss_pred ccccccccc--C---ceEEeccCCCCCcccccC
Q psy14605 13 DYCEVCQQG--G---EIILCDTCPRAYHLCCLD 40 (139)
Q Consensus 13 ~~C~vC~~~--g---~ll~Cd~C~~~~H~~Cl~ 40 (139)
.+|..|++- | .-+.|..|....|..|+.
T Consensus 29 t~C~~C~~~lwGl~kqg~~C~~C~~~~Hk~C~~ 61 (83)
T 2yuu_A 29 TFCSVCKDFVWGLNKQGYKCRQCNAAIHKKCID 61 (83)
T ss_dssp CCCSSSCCCCCSSSCCEEEETTTCCEECTTGGG
T ss_pred cChhhcChhhccccccccccCCcCCeeChhhhh
Confidence 579999873 2 578899999999999987
No 143
>1ptq_A Protein kinase C delta type; phosphotransferase; 1.95A {Mus musculus} SCOP: g.49.1.1 PDB: 1ptr_A*
Probab=31.86 E-value=16 Score=20.46 Aligned_cols=29 Identities=24% Similarity=0.715 Sum_probs=23.7
Q ss_pred cccccccccc--C---ceEEeccCCCCCcccccC
Q psy14605 12 QDYCEVCQQG--G---EIILCDTCPRAYHLCCLD 40 (139)
Q Consensus 12 ~~~C~vC~~~--g---~ll~Cd~C~~~~H~~Cl~ 40 (139)
..+|..|++- | +-+.|..|....|..|..
T Consensus 11 pt~C~~C~~~l~g~~~qg~~C~~C~~~~H~~C~~ 44 (50)
T 1ptq_A 11 PTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCRE 44 (50)
T ss_dssp CCBCTTTCCBCCSSSSCEEEETTTCCEECHHHHT
T ss_pred CCCcCCCCceeeccCCccCEeCCCCCeECHHHhh
Confidence 3579999873 2 678899999999999986
No 144
>2co8_A NEDD9 interacting protein with calponin homology and LIM domains; zinc finger protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=30.70 E-value=74 Score=19.44 Aligned_cols=48 Identities=19% Similarity=0.427 Sum_probs=27.9
Q ss_pred cccccccccccc---CceEEeccCCCCCcccccC-----CCCCCC------CCCCccccccccC
Q psy14605 10 EHQDYCEVCQQG---GEIILCDTCPRAYHLCCLD-----PELDET------PEGKWSCPRCVSD 59 (139)
Q Consensus 10 ~~~~~C~vC~~~---g~ll~Cd~C~~~~H~~Cl~-----P~l~~~------p~~~W~C~~C~~~ 59 (139)
.....|..|++. ++++. .-++.||..|.. -+|... .++..||..|...
T Consensus 13 ~~~~~C~~C~~~I~~~e~v~--a~~~~wH~~CF~C~~C~~~L~~~~~~~~~~~g~~yC~~~y~~ 74 (82)
T 2co8_A 13 GAGDLCALCGEHLYVLERLC--VNGHFFHRSCFRCHTCEATLWPGGYEQHPGDGHFYCLQHLPQ 74 (82)
T ss_dssp CSSCBCSSSCCBCCTTTBCC--BTTBCCBTTTCBCSSSCCBCCTTSEECCTTTCCCEETTTCCC
T ss_pred CCCCCCcccCCCcccceEEE--ECCCeeCCCcCEEcCCCCCcCCCceeEeCcCCEEEChHHHHh
Confidence 344679999984 34443 446788876542 122221 2466778777654
No 145
>2kpi_A Uncharacterized protein SCO3027; zinc finger, PSI-2, NESG, all beta, structural genomics, protein structure initiative; NMR {Streptomyces coelicolor}
Probab=30.28 E-value=23 Score=21.13 Aligned_cols=25 Identities=24% Similarity=0.627 Sum_probs=17.8
Q ss_pred cccccccccc----CceEEec--cCCCCCcc
Q psy14605 12 QDYCEVCQQG----GEIILCD--TCPRAYHL 36 (139)
Q Consensus 12 ~~~C~vC~~~----g~ll~Cd--~C~~~~H~ 36 (139)
--.|.+|+.+ ..-+.|. .|..+|=.
T Consensus 10 iL~CP~c~~~L~~~~~~L~C~~~~c~~~YPI 40 (56)
T 2kpi_A 10 ILACPACHAPLEERDAELICTGQDCGLAYPV 40 (56)
T ss_dssp SCCCSSSCSCEEEETTEEEECSSSCCCEEEE
T ss_pred heeCCCCCCcceecCCEEEcCCcCCCcEEee
Confidence 3579999975 2456788 89888843
No 146
>2drn_C 24-residues peptide from AN A-kinase anchoring protein; AKAP, PKA, signal transduction, 4-helix bundle, helix- loop-helix; NMR {Rattus norvegicus}
Probab=29.98 E-value=37 Score=17.20 Aligned_cols=13 Identities=23% Similarity=0.210 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHHh
Q psy14605 122 GQMARQILLALFL 134 (139)
Q Consensus 122 ~~~~~~~~~~~~~ 134 (139)
+.-|+||+||..-
T Consensus 4 EEaA~RIVdaVi~ 16 (26)
T 2drn_C 4 EEAASRIVDAVIE 16 (26)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 4568999999764
No 147
>1dx8_A Rubredoxin; electron transport, zinc-substitution; NMR {Guillardia theta} SCOP: g.41.5.1 PDB: 1h7v_A
Probab=29.59 E-value=40 Score=21.02 Aligned_cols=11 Identities=36% Similarity=0.966 Sum_probs=8.9
Q ss_pred CCccccccccC
Q psy14605 49 GKWSCPRCVSD 59 (139)
Q Consensus 49 ~~W~C~~C~~~ 59 (139)
.+|.||.|-..
T Consensus 39 ddw~CP~Cga~ 49 (70)
T 1dx8_A 39 DSFMCPACRSP 49 (70)
T ss_dssp TTCBCTTTCCB
T ss_pred CCCcCCCCCCC
Confidence 47999999764
No 148
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=29.29 E-value=29 Score=21.04 Aligned_cols=40 Identities=20% Similarity=0.516 Sum_probs=26.4
Q ss_pred ccccccccccCceEEeccCCCC-CcccccCCCCCCCCCCCccccccccC
Q psy14605 12 QDYCEVCQQGGEIILCDTCPRA-YHLCCLDPELDETPEGKWSCPRCVSD 59 (139)
Q Consensus 12 ~~~C~vC~~~g~ll~Cd~C~~~-~H~~Cl~P~l~~~p~~~W~C~~C~~~ 59 (139)
+..|.+|...-.-..--.|+-. |...|+... ..||.|...
T Consensus 24 ~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~--------~~CP~Cr~~ 64 (74)
T 4ic3_A 24 EKLCKICMDRNIAIVFVPCGHLVTCKQCAEAV--------DKCPMCYTV 64 (74)
T ss_dssp HTBCTTTSSSBCCEEEETTCCBCCCHHHHTTC--------SBCTTTCCB
T ss_pred CCCCCCCCCCCCCEEEcCCCChhHHHHhhhcC--------ccCCCcCcC
Confidence 4679999985432222367766 777887632 679999865
No 149
>3uej_A NPKC-delta, protein kinase C delta type; proteine kinase cdelta, phosphotransferase, anesthetic bindi metal binding protein; 1.30A {Mus musculus} PDB: 3ugi_A 3ugl_A 3uey_A 3ugd_A 3uff_A 1ptq_A 1ptr_A*
Probab=28.28 E-value=20 Score=21.48 Aligned_cols=29 Identities=24% Similarity=0.715 Sum_probs=23.9
Q ss_pred cccccccccc--C---ceEEeccCCCCCcccccC
Q psy14605 12 QDYCEVCQQG--G---EIILCDTCPRAYHLCCLD 40 (139)
Q Consensus 12 ~~~C~vC~~~--g---~ll~Cd~C~~~~H~~Cl~ 40 (139)
..+|..|++- | +-+.|..|....|..|..
T Consensus 20 pt~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~ 53 (65)
T 3uej_A 20 PTFCDHCGSLLWGLVKQGLKCEDCGMNVHHKCRE 53 (65)
T ss_dssp CCBCTTTCCBCCSSSSCEEEETTTCCEECHHHHT
T ss_pred CCcccccChhhhccCceeeECCCCCCeEchhHhh
Confidence 3579999873 2 578899999999999986
No 150
>2db6_A SH3 and cysteine rich domain 3; STAC3, C1 domain, cystein-rich domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.27 E-value=19 Score=22.34 Aligned_cols=28 Identities=25% Similarity=0.653 Sum_probs=23.5
Q ss_pred ccccccccc--C---ceEEeccCCCCCcccccC
Q psy14605 13 DYCEVCQQG--G---EIILCDTCPRAYHLCCLD 40 (139)
Q Consensus 13 ~~C~vC~~~--g---~ll~Cd~C~~~~H~~Cl~ 40 (139)
.+|..|+.- | +-+.|..|....|..|+.
T Consensus 29 t~C~~C~~~lwGl~kqG~~C~~C~~~~Hk~C~~ 61 (74)
T 2db6_A 29 KFCDVCARMIVLNNKFGLRCKNCKTNIHEHCQS 61 (74)
T ss_dssp EECSSSCCEECHHHHEEEEESSSCCEECTTTTG
T ss_pred cCchhcChhhccccCCccccCCCCCccChhHHh
Confidence 579999873 2 578899999999999987
No 151
>2eli_A Protein kinase C alpha type; PKC-alpha, PKC-A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.14 E-value=29 Score=22.04 Aligned_cols=28 Identities=32% Similarity=0.776 Sum_probs=23.6
Q ss_pred ccccccccc--C---ceEEeccCCCCCcccccC
Q psy14605 13 DYCEVCQQG--G---EIILCDTCPRAYHLCCLD 40 (139)
Q Consensus 13 ~~C~vC~~~--g---~ll~Cd~C~~~~H~~Cl~ 40 (139)
.+|..|++- | +-+.|..|....|..|+.
T Consensus 29 t~C~~C~~~l~Gl~kqG~~C~~C~~~~Hk~C~~ 61 (85)
T 2eli_A 29 TFCDHCGSLLYGLIHQGMKCDTCDMNVHKQCVI 61 (85)
T ss_dssp CBCSSSCCBCCCSSSCEEECSSSCCEEETTTTT
T ss_pred cCCcccCccccccccCCCcCCCcCCccCHhHHh
Confidence 579999873 3 678899999999999987
No 152
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=28.07 E-value=5.2 Score=26.77 Aligned_cols=47 Identities=17% Similarity=0.376 Sum_probs=30.5
Q ss_pred ccccccccccccC-ceEEeccCCCCCcccccCCCCCCCCCCCccccccccCC
Q psy14605 10 EHQDYCEVCQQGG-EIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDG 60 (139)
Q Consensus 10 ~~~~~C~vC~~~g-~ll~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~~~ 60 (139)
.....|.+|...- +-+. -.|+-.|+..|+...+... ...||.|....
T Consensus 16 ~~~~~C~IC~~~~~~p~~-~~CgH~fC~~Ci~~~~~~~---~~~CP~Cr~~~ 63 (118)
T 3hct_A 16 ESKYECPICLMALREAVQ-TPCGHRFCKACIIKSIRDA---GHKCPVDNEIL 63 (118)
T ss_dssp CGGGBCTTTCSBCSSEEE-CTTSCEEEHHHHHHHHHHH---CSBCTTTCCBC
T ss_pred CCCCCCCcCChhhcCeEE-CCcCChhhHHHHHHHHhhC---CCCCCCCCCCc
Confidence 3446799999753 2222 3699889999986433221 23899997653
No 153
>2v3b_B Rubredoxin 2, rubredoxin; alkane degradation, iron-sulfur protein, oxidoreductase, ELE transfer, electron transport, FAD, NAD, iron; HET: FAD; 2.45A {Pseudomonas aeruginosa}
Probab=27.78 E-value=34 Score=20.29 Aligned_cols=11 Identities=36% Similarity=1.220 Sum_probs=9.1
Q ss_pred CCccccccccC
Q psy14605 49 GKWSCPRCVSD 59 (139)
Q Consensus 49 ~~W~C~~C~~~ 59 (139)
.+|.||.|-..
T Consensus 35 ~dw~CP~Cga~ 45 (55)
T 2v3b_B 35 ADWVCPDCGVG 45 (55)
T ss_dssp TTCCCTTTCCC
T ss_pred CCCcCCCCCCC
Confidence 47999999764
No 154
>2d9g_A YY1-associated factor 2; ZF-ranbp domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.27 E-value=32 Score=20.27 Aligned_cols=15 Identities=33% Similarity=0.882 Sum_probs=11.2
Q ss_pred CCCCCccccccccCC
Q psy14605 46 TPEGKWSCPRCVSDG 60 (139)
Q Consensus 46 ~p~~~W~C~~C~~~~ 60 (139)
.+.+.|.|+.|....
T Consensus 7 ~~~~~W~C~~CT~~N 21 (53)
T 2d9g_A 7 GDEGYWDCSVCTFRN 21 (53)
T ss_dssp SCCCCEECSSSCCEE
T ss_pred CCCCCcCCCCCccCC
Confidence 355789999997653
No 155
>1s24_A Rubredoxin 2; electron transport; NMR {Pseudomonas oleovorans} SCOP: g.41.5.1
Probab=25.97 E-value=36 Score=22.27 Aligned_cols=11 Identities=36% Similarity=1.301 Sum_probs=8.9
Q ss_pred CCccccccccC
Q psy14605 49 GKWSCPRCVSD 59 (139)
Q Consensus 49 ~~W~C~~C~~~ 59 (139)
.+|.||.|-..
T Consensus 67 ddW~CPvCga~ 77 (87)
T 1s24_A 67 DDWCCPDCGAT 77 (87)
T ss_dssp TTCCCSSSCCC
T ss_pred CCCCCCCCCCC
Confidence 47999999764
No 156
>1zfo_A LAsp-1; LIM domain, zinc-finger, metal-binding protein; NMR {Sus scrofa} SCOP: g.39.1.4
Probab=25.46 E-value=25 Score=18.15 Aligned_cols=24 Identities=25% Similarity=0.592 Sum_probs=14.3
Q ss_pred ccccccccc---CceEEeccCCCCCcccc
Q psy14605 13 DYCEVCQQG---GEIILCDTCPRAYHLCC 38 (139)
Q Consensus 13 ~~C~vC~~~---g~ll~Cd~C~~~~H~~C 38 (139)
+.|..|++. .+-+..+ ++.||..|
T Consensus 4 ~~C~~C~k~Vy~~Ek~~~~--g~~~Hk~C 30 (31)
T 1zfo_A 4 PNCARCGKIVYPTEKVNCL--DKFWHKAC 30 (31)
T ss_dssp CBCSSSCSBCCGGGCCCSS--SSCCCGGG
T ss_pred CcCCccCCEEecceeEEEC--CeEecccC
Confidence 467888874 2333333 46777776
No 157
>1kbe_A Kinase suppressor of RAS; KSR, cysteine-rich domain, zinc- binding protein, signaling protein; NMR {Mus musculus} SCOP: g.49.1.1 PDB: 1kbf_A
Probab=25.12 E-value=24 Score=20.43 Aligned_cols=28 Identities=29% Similarity=0.606 Sum_probs=21.9
Q ss_pred cccccccccC-ceEEeccCCCCCcccccC
Q psy14605 13 DYCEVCQQGG-EIILCDTCPRAYHLCCLD 40 (139)
Q Consensus 13 ~~C~vC~~~g-~ll~Cd~C~~~~H~~Cl~ 40 (139)
.+|..|++.= .-+-|..|....|..|..
T Consensus 15 t~C~~C~k~i~~G~kC~~Ck~~cH~kC~~ 43 (49)
T 1kbe_A 15 QVCNVCQKSMIFGVKCKHCRLKCHNKCTK 43 (49)
T ss_dssp CCCSSSCCSSCCEEEETTTTEEESSSCTT
T ss_pred cCccccCceeECcCCCCCCCCccchhhcC
Confidence 5799998741 126799999999999976
No 158
>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...
Probab=24.17 E-value=35 Score=20.28 Aligned_cols=11 Identities=36% Similarity=1.150 Sum_probs=9.0
Q ss_pred CCccccccccC
Q psy14605 49 GKWSCPRCVSD 59 (139)
Q Consensus 49 ~~W~C~~C~~~ 59 (139)
.+|.||.|-..
T Consensus 35 ~dw~CP~Cg~~ 45 (54)
T 4rxn_A 35 DDWVCPLCGVG 45 (54)
T ss_dssp TTCBCTTTCCB
T ss_pred CCCcCcCCCCc
Confidence 47999999764
No 159
>1y8f_A UNC-13 homolog A, MUNC13-1; cysteine-rich domain, C1-domain, zinc-binding domain, endocytosis/exocytosis,signaling protein complex; NMR {Rattus norvegicus}
Probab=23.59 E-value=28 Score=20.90 Aligned_cols=28 Identities=32% Similarity=0.714 Sum_probs=23.2
Q ss_pred ccccccccc--C---ceEEeccCCCCCcccccC
Q psy14605 13 DYCEVCQQG--G---EIILCDTCPRAYHLCCLD 40 (139)
Q Consensus 13 ~~C~vC~~~--g---~ll~Cd~C~~~~H~~Cl~ 40 (139)
.+|..|++- | +-+.|..|....|..|+.
T Consensus 25 t~C~~C~~~l~Gl~~qg~~C~~C~~~~Hk~C~~ 57 (66)
T 1y8f_A 25 TYCYECEGLLWGIARQGMRCTECGVKCHEKCQD 57 (66)
T ss_dssp CCCTTTCCCCCSSCCEEEEETTTCCEECTTHHH
T ss_pred cChhhcChhhcccCcceeEcCCCCCeeCHHHHh
Confidence 579999873 2 567899999999999976
No 160
>3j20_Y 30S ribosomal protein S27AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=22.36 E-value=37 Score=19.71 Aligned_cols=8 Identities=25% Similarity=1.036 Sum_probs=4.7
Q ss_pred cccccccc
Q psy14605 13 DYCEVCQQ 20 (139)
Q Consensus 13 ~~C~vC~~ 20 (139)
.+|+.|+.
T Consensus 20 k~CP~CG~ 27 (50)
T 3j20_Y 20 KFCPRCGP 27 (50)
T ss_dssp EECSSSCS
T ss_pred ccCCCCCC
Confidence 45666654
No 161
>2d8y_A Eplin protein; LIM domain, epithelial protein LOST in neoplasm, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=22.36 E-value=53 Score=20.44 Aligned_cols=33 Identities=21% Similarity=0.529 Sum_probs=20.8
Q ss_pred CCCcccccccccccccc---CceEEeccCCCCCccccc
Q psy14605 5 QDLQTEHQDYCEVCQQG---GEIILCDTCPRAYHLCCL 39 (139)
Q Consensus 5 d~~~~~~~~~C~vC~~~---g~ll~Cd~C~~~~H~~Cl 39 (139)
..+.......|..|+.. ++++ ..-++.||..|.
T Consensus 8 ~~~~~~~~~~C~~C~~~I~~~~~v--~a~~~~~H~~CF 43 (91)
T 2d8y_A 8 MKFQAPARETCVECQKTVYPMERL--LANQQVFHISCF 43 (91)
T ss_dssp SCSCSSSSCBCTTTCCBCCTTSEE--ECSSSEEETTTC
T ss_pred CccCCCCCCcCccCCCccCCceeE--EECCCEECCCCC
Confidence 33334456789999985 3444 355678887664
No 162
>2y1n_A E3 ubiquitin-protein ligase; ligase-transferase complex, ubiquitin ring E3 ligase; HET: PTR; 2.00A {Homo sapiens} PDB: 2y1m_A* 4a4c_A* 4a4b_A* 1fbv_A* 3vgo_A 4a49_A* 2k4d_A 2ldr_A*
Probab=22.07 E-value=9.3 Score=31.67 Aligned_cols=44 Identities=18% Similarity=0.560 Sum_probs=30.7
Q ss_pred cccccccccCceEEeccCCCCCcccccCCCCCCCCCCCccccccccC
Q psy14605 13 DYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSD 59 (139)
Q Consensus 13 ~~C~vC~~~g~ll~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~~ 59 (139)
..|.+|...-.-...-.|+-.||..|+...+.. ..-.||.|...
T Consensus 333 ~~C~ICle~~~~pv~lpCGH~FC~~Ci~~wl~~---~~~~CP~CR~~ 376 (389)
T 2y1n_A 333 QLCKICAENDKDVKIEPCGHLMCTSCLTSWQES---EGQGCPFCRCE 376 (389)
T ss_dssp SBCTTTSSSBCCEEEETTCCEECHHHHHHHHHH---TCSBCTTTCCB
T ss_pred CCCCccCcCCCCeEEeCCCChhhHHHHHHHHhc---CCCCCCCCCCc
Confidence 579999886544445678888999998643321 23479999865
No 163
>2dj8_A Protein CBFA2T1; zinc finger MYND domain, protein MTG8, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.85.1.1
Probab=21.92 E-value=57 Score=19.10 Aligned_cols=22 Identities=23% Similarity=0.525 Sum_probs=15.7
Q ss_pred cccccccccccCceEEeccCCCC
Q psy14605 11 HQDYCEVCQQGGEIILCDTCPRA 33 (139)
Q Consensus 11 ~~~~C~vC~~~g~ll~Cd~C~~~ 33 (139)
....|..|+.. .+..|..|..+
T Consensus 14 ~~~~C~~C~~~-~~~~Cs~C~~v 35 (60)
T 2dj8_A 14 SSESCWNCGRK-ASETCSGCNTA 35 (60)
T ss_dssp CSCCCSSSCSC-CCEECTTTSCC
T ss_pred CCcccccCCCC-CcccCCCCCCE
Confidence 34678888874 47778888664
No 164
>3im4_C Dual specificity A kinase-anchoring protein 2; four-helix bundle, acetylation, CAMP, CAMP-binding, disulfide bond, nucleotide-binding; 2.29A {Homo sapiens} PDB: 3tmh_D
Probab=21.59 E-value=78 Score=18.12 Aligned_cols=16 Identities=25% Similarity=0.393 Sum_probs=9.8
Q ss_pred HHHHHHHHHHHHHHHHH
Q psy14605 114 EKEEARIYGQMARQILL 130 (139)
Q Consensus 114 ~~~~~~~~~~~~~~~~~ 130 (139)
+..|.+||+ ||.-|+.
T Consensus 12 ~aqEEMAWq-IA~MIV~ 27 (45)
T 3im4_C 12 EAQEELAWK-IAKMIVS 27 (45)
T ss_dssp HHHHHHHHH-HHHHHHH
T ss_pred HHHHHHHHH-HHHHHHH
Confidence 445678995 5555543
No 165
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=21.42 E-value=7.4 Score=25.72 Aligned_cols=47 Identities=17% Similarity=0.368 Sum_probs=31.2
Q ss_pred cccccccccccC-ceEEeccCCCCCcccccCCCCCCCCCCCccccccccCCC
Q psy14605 11 HQDYCEVCQQGG-EIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGP 61 (139)
Q Consensus 11 ~~~~C~vC~~~g-~ll~Cd~C~~~~H~~Cl~P~l~~~p~~~W~C~~C~~~~~ 61 (139)
.+..|.+|...- +-+. -.|+-.|+..|+...+... .-.||.|.....
T Consensus 22 ~~~~C~IC~~~~~~p~~-~~CgH~fC~~Ci~~~~~~~---~~~CP~Cr~~~~ 69 (116)
T 1rmd_A 22 KSISCQICEHILADPVE-TSCKHLFCRICILRCLKVM---GSYCPSCRYPCF 69 (116)
T ss_dssp HHTBCTTTCSBCSSEEE-CTTSCEEEHHHHHHHHHHT---CSBCTTTCCBCC
T ss_pred CCCCCCCCCcHhcCcEE-cCCCCcccHHHHHHHHhHC---cCcCCCCCCCCC
Confidence 346799999853 2222 4799999999986443321 247999987644
No 166
>2fnf_X Putative RAS effector NORE1; zinc, signal transduction, apoptosis, cysteine rich domain; NMR {Mus musculus}
Probab=21.09 E-value=44 Score=20.64 Aligned_cols=28 Identities=21% Similarity=0.739 Sum_probs=21.9
Q ss_pred ccccccccc--CceEEeccCCCCCcccccC
Q psy14605 13 DYCEVCQQG--GEIILCDTCPRAYHLCCLD 40 (139)
Q Consensus 13 ~~C~vC~~~--g~ll~Cd~C~~~~H~~Cl~ 40 (139)
.+|..|+.- .+-+-|..|....|..|..
T Consensus 36 t~C~~C~~~l~~qG~kC~~C~~~cHkkC~~ 65 (72)
T 2fnf_X 36 GWCDLCGREVLRQALRCANCKFTCHSECRS 65 (72)
T ss_dssp CBCTTTSSBCSSCCEECTTSSCEECTGGGG
T ss_pred cchhhhhHHHHhCcCccCCCCCeechhhhc
Confidence 468888762 3557799999999999976
No 167
>3f6q_B LIM and senescent cell antigen-like-containing domain protein 1; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 2kbx_B 3ixe_B
Probab=21.05 E-value=28 Score=20.35 Aligned_cols=35 Identities=29% Similarity=0.506 Sum_probs=20.2
Q ss_pred CCCcccccccccccccc---CceEEeccCCCCCcccccC
Q psy14605 5 QDLQTEHQDYCEVCQQG---GEIILCDTCPRAYHLCCLD 40 (139)
Q Consensus 5 d~~~~~~~~~C~vC~~~---g~ll~Cd~C~~~~H~~Cl~ 40 (139)
+-+.......|..|++. ++.+ ...-++.||..|..
T Consensus 4 ~yy~~~~~~~C~~C~~~i~~~e~~-~~~~~~~~H~~CF~ 41 (72)
T 3f6q_B 4 LYFQGSASATCERCKGGFAPAEKI-VNSNGELYHEQCFV 41 (72)
T ss_dssp EECCCCTTCBCTTTCCBCCTTCEE-EEETTEEEETTTSS
T ss_pred ccccCcCCccchhcCccccCCceE-EEeCcCeeCcCCCc
Confidence 33444455689999985 2322 12345678887753
No 168
>1qf8_A Casein kinase II; casein kinase beta subunit (1-182), Ser/Thr protein kinase, Zn finger, transferase; HET: MSE; 1.74A {Homo sapiens} SCOP: g.41.4.1 PDB: 3eed_A 1rqf_A
Probab=20.39 E-value=30 Score=25.63 Aligned_cols=34 Identities=35% Similarity=0.683 Sum_probs=19.3
Q ss_pred cCCCCCc--ccccCCCCCCCCC---CCccccccccCCCC
Q psy14605 29 TCPRAYH--LCCLDPELDETPE---GKWSCPRCVSDGPP 62 (139)
Q Consensus 29 ~C~~~~H--~~Cl~P~l~~~p~---~~W~C~~C~~~~~~ 62 (139)
.||+.|- +.|+--.++..|. -..|||.|.....+
T Consensus 108 ~CPRv~C~~q~~LPvGlSd~pg~~~VKlyCP~C~DvY~p 146 (182)
T 1qf8_A 108 YCPRVYCENQPMLPIGLSDIPGEAMVKLYCPKCMDVYTP 146 (182)
T ss_dssp BCCBGGGTTCBCEEECSCSSTTSCBCEEECTTTCCEECC
T ss_pred CCCccccCCCcccCCccCCCCCCCceEEECCCccceeCC
Confidence 5777553 2233223444443 36999999876544
No 169
>2ebr_A Nuclear pore complex protein NUP153; ZF-ranbp domain, nucleoporin NUP153, 153 kDa nucleoporin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.33 E-value=93 Score=17.86 Aligned_cols=18 Identities=33% Similarity=0.996 Sum_probs=12.8
Q ss_pred CCCCCCccccccccCCCC
Q psy14605 45 ETPEGKWSCPRCVSDGPP 62 (139)
Q Consensus 45 ~~p~~~W~C~~C~~~~~~ 62 (139)
..+.|.|-|..|......
T Consensus 6 k~~~gsW~C~~C~v~N~a 23 (47)
T 2ebr_A 6 SGPEGSWDCELCLVQNKA 23 (47)
T ss_dssp SSCCSSCCCSSSCCCCCS
T ss_pred cCCCCeeECCeeecCCcC
Confidence 346788999999765444
No 170
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding, metal-binding, phosphoprotein, exchange factor, RAC, GTPase, membrane domain; 1.85A {Mus musculus} PDB: 3bji_A 1f5x_A
Probab=20.32 E-value=43 Score=26.74 Aligned_cols=29 Identities=31% Similarity=0.618 Sum_probs=24.0
Q ss_pred cccccccccc--C---ceEEeccCCCCCcccccC
Q psy14605 12 QDYCEVCQQG--G---EIILCDTCPRAYHLCCLD 40 (139)
Q Consensus 12 ~~~C~vC~~~--g---~ll~Cd~C~~~~H~~Cl~ 40 (139)
..+|..|+.. | .-..|..|+..+|-.|..
T Consensus 357 ~t~C~~C~~~~~g~~~qg~~C~~C~~~~h~~C~~ 390 (406)
T 2vrw_B 357 TTSCKACQMLLRGTFYQGYRCYRCRAPAHKECLG 390 (406)
T ss_dssp CCBCTTTCCBCCSSSSCEEEETTTCCEECGGGGG
T ss_pred CCCCccccchhceeCCCCCCCCCCcCccchhhhh
Confidence 3579999973 3 577899999999999986
Done!