Your job contains 1 sequence.
>psy14606
MSHIQDLQTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDG
PPETASPPAEEVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCP
KCSCPPLPGKLEDMASLLRLPRQHR
The BLAST search returned 13 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy14606
(145 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0262519 - symbol:Mi-2 species:7227 "Drosophila mel... 426 2.2e-38 1
UNIPROTKB|J9NRN3 - symbol:CHD5 "Uncharacterized protein" ... 413 2.4e-37 1
UNIPROTKB|F2Z2R5 - symbol:CHD5 "Chromodomain-helicase-DNA... 413 2.5e-37 1
UNIPROTKB|F1SSZ2 - symbol:CHD5 "Uncharacterized protein" ... 413 4.2e-37 1
UNIPROTKB|F1RIM3 - symbol:CHD5 "Uncharacterized protein" ... 413 4.4e-37 1
UNIPROTKB|E2R1M3 - symbol:CHD5 "Uncharacterized protein" ... 413 4.8e-37 1
RGD|1582725 - symbol:Chd5 "chromodomain helicase DNA bind... 413 5.2e-37 1
UNIPROTKB|Q8TDI0 - symbol:CHD5 "Chromodomain-helicase-DNA... 413 5.3e-37 1
UNIPROTKB|F1NH78 - symbol:F1NH78 "Uncharacterized protein... 412 5.9e-37 1
UNIPROTKB|H7C2H0 - symbol:CHD3 "Chromodomain-helicase-DNA... 396 8.0e-37 1
UNIPROTKB|F1MFF9 - symbol:Bt.62145 "Uncharacterized prote... 410 1.0e-36 1
UNIPROTKB|F1LPP8 - symbol:Chd3 "Protein Chd3" species:101... 395 5.3e-36 1
UNIPROTKB|F1SLR5 - symbol:CHD4 "Uncharacterized protein" ... 393 1.7e-35 2
UNIPROTKB|E2RTI2 - symbol:CHD3 "Uncharacterized protein" ... 398 2.2e-35 1
UNIPROTKB|F1N544 - symbol:CHD3 "Uncharacterized protein" ... 397 2.8e-35 1
UNIPROTKB|Q12873 - symbol:CHD3 "Chromodomain-helicase-DNA... 396 3.5e-35 1
UNIPROTKB|E9PG89 - symbol:CHD3 "Chromodomain-helicase-DNA... 396 3.7e-35 1
RGD|1311923 - symbol:Chd3 "chromodomain helicase DNA bind... 395 4.3e-35 1
UNIPROTKB|F1LPP7 - symbol:Chd3 "Protein Chd3" species:101... 395 4.6e-35 1
UNIPROTKB|F1M7Q0 - symbol:Chd3 "Protein Chd3" species:101... 395 4.7e-35 1
UNIPROTKB|E2RHA0 - symbol:CHD4 "Uncharacterized protein" ... 393 6.9e-35 1
MGI|MGI:1344380 - symbol:Chd4 "chromodomain helicase DNA ... 393 6.9e-35 1
UNIPROTKB|E9PU01 - symbol:Chd4 "Protein Chd4" species:101... 393 6.9e-35 1
UNIPROTKB|J9NW81 - symbol:CHD4 "Uncharacterized protein" ... 393 7.0e-35 1
UNIPROTKB|F1N3F6 - symbol:CHD4 "Uncharacterized protein" ... 393 7.0e-35 1
UNIPROTKB|F1LM59 - symbol:Chd4 "Protein Chd4" species:101... 393 7.1e-35 1
UNIPROTKB|F1ST12 - symbol:CHD3 "Uncharacterized protein" ... 393 7.4e-35 1
UNIPROTKB|F5GWX5 - symbol:CHD4 "Chromodomain-helicase-DNA... 389 1.8e-34 1
UNIPROTKB|Q14839 - symbol:CHD4 "Chromodomain-helicase-DNA... 389 1.8e-34 1
UNIPROTKB|F1NH79 - symbol:CHD4 "Uncharacterized protein" ... 386 3.8e-34 1
ZFIN|ZDB-GENE-041111-187 - symbol:chd4a "chromodomain hel... 381 1.3e-33 1
WB|WBGene00000482 - symbol:chd-3 species:6239 "Caenorhabd... 320 3.7e-27 1
UNIPROTKB|Q22516 - symbol:chd-3 "Chromodomain-helicase-DN... 320 3.7e-27 1
WB|WBGene00002637 - symbol:let-418 species:6239 "Caenorha... 311 3.4e-26 1
UNIPROTKB|G5EBZ4 - symbol:let-418 "Protein let-418" speci... 311 3.4e-26 1
ZFIN|ZDB-GENE-030131-4532 - symbol:chd4b "chromodomain he... 294 2.4e-24 1
ZFIN|ZDB-GENE-121031-4 - symbol:chd3 "chromodomain helica... 261 3.7e-22 1
UNIPROTKB|C9JL37 - symbol:AIRE "Autoimmune regulator" spe... 182 1.1e-18 2
UNIPROTKB|O43918 - symbol:AIRE "Autoimmune regulator" spe... 185 5.3e-18 2
RGD|1311139 - symbol:Aire "autoimmune regulator" species:... 175 1.6e-17 2
MGI|MGI:1338803 - symbol:Aire "autoimmune regulator (auto... 172 8.6e-17 2
UNIPROTKB|E1BIC4 - symbol:AIRE "Uncharacterized protein" ... 185 1.0e-16 2
DICTYBASE|DDB_G0277341 - symbol:DDB_G0277341 "PHD zinc fi... 157 1.2e-16 2
POMBASE|SPAC2F7.07c - symbol:cph2 "Clr6 histone deacetyla... 130 2.5e-16 2
ZFIN|ZDB-GENE-030131-5379 - symbol:kdm5ba "lysine (K)-spe... 141 9.7e-16 3
UNIPROTKB|F1MS13 - symbol:PHF21A "Uncharacterized protein... 184 7.2e-15 2
UNIPROTKB|D4AC30 - symbol:D4AC30 "Uncharacterized protein... 146 2.2e-14 3
UNIPROTKB|F1S4N3 - symbol:KDM5B "Uncharacterized protein"... 122 2.4e-14 2
UNIPROTKB|F1PFZ4 - symbol:BPTF "Uncharacterized protein" ... 157 2.6e-14 2
UNIPROTKB|E7ETD6 - symbol:BPTF "Nucleosome-remodeling fac... 157 2.7e-14 2
UNIPROTKB|J9JHE8 - symbol:BPTF "Uncharacterized protein" ... 157 2.9e-14 2
UNIPROTKB|F1N3U7 - symbol:BPTF "Uncharacterized protein" ... 157 2.9e-14 2
UNIPROTKB|F1PJS3 - symbol:KDM5B "Uncharacterized protein"... 122 3.1e-14 2
UNIPROTKB|Q12830 - symbol:BPTF "Nucleosome-remodeling fac... 157 3.4e-14 2
FB|FBgn0029861 - symbol:CG3815 species:7227 "Drosophila m... 156 3.5e-14 2
ZFIN|ZDB-GENE-071008-4 - symbol:aire "autoimmune regulato... 165 3.6e-14 2
UNIPROTKB|C9JFR1 - symbol:AIRE "Autoimmune regulator" spe... 182 3.8e-14 1
UNIPROTKB|E2QYC0 - symbol:PHF12 "Uncharacterized protein"... 146 4.9e-14 3
UNIPROTKB|F1LM99 - symbol:F1LM99 "Uncharacterized protein... 146 5.5e-14 3
MGI|MGI:1924057 - symbol:Phf12 "PHD finger protein 12" sp... 146 5.5e-14 3
UNIPROTKB|F1RNA4 - symbol:PHF12 "Uncharacterized protein"... 146 5.5e-14 3
UNIPROTKB|E1B7A1 - symbol:PHF12 "Uncharacterized protein"... 146 5.5e-14 3
UNIPROTKB|E1C5C7 - symbol:BPTF "Uncharacterized protein" ... 157 5.7e-14 2
UNIPROTKB|E1C5C8 - symbol:BPTF "Uncharacterized protein" ... 157 5.8e-14 2
CGD|CAL0003038 - symbol:orf19.6506 species:5476 "Candida ... 144 6.3e-14 2
UNIPROTKB|F1LX76 - symbol:F1LX76 "Uncharacterized protein... 158 7.8e-14 2
UNIPROTKB|F1M1V5 - symbol:F1M1V5 "Uncharacterized protein... 158 8.2e-14 2
UNIPROTKB|F1M1V4 - symbol:F1M1V4 "Uncharacterized protein... 158 8.5e-14 2
MGI|MGI:1922855 - symbol:Kdm5b "lysine (K)-specific demet... 122 8.9e-14 2
UNIPROTKB|F1PPM4 - symbol:AIRE "Uncharacterized protein" ... 187 9.9e-14 1
UNIPROTKB|H7C212 - symbol:MLL3 "Histone-lysine N-methyltr... 124 1.0e-13 2
RGD|1565602 - symbol:Kdm5b "lysine (K)-specific demethyla... 121 1.1e-13 2
SGD|S000004680 - symbol:RCO1 "Essential subunit of the hi... 156 1.2e-13 2
UNIPROTKB|F1NRC4 - symbol:KDM5B "Lysine-specific demethyl... 121 1.4e-13 2
UNIPROTKB|F1NUR9 - symbol:KDM5B "Lysine-specific demethyl... 121 1.4e-13 2
UNIPROTKB|Q5F3R2 - symbol:KDM5B "Lysine-specific demethyl... 121 1.4e-13 2
UNIPROTKB|F1MUR2 - symbol:KDM5B "Uncharacterized protein"... 122 1.7e-13 2
UNIPROTKB|I3LDB0 - symbol:I3LDB0 "Uncharacterized protein... 184 2.2e-13 1
UNIPROTKB|B3KV94 - symbol:JARID1B "cDNA FLJ16281 fis, clo... 122 2.4e-13 2
UNIPROTKB|Q96BD5 - symbol:PHF21A "PHD finger protein 21A"... 184 3.0e-13 1
UNIPROTKB|F1PQV6 - symbol:PHF21A "Uncharacterized protein... 184 3.0e-13 1
UNIPROTKB|Q9UGL1 - symbol:KDM5B "Lysine-specific demethyl... 122 3.7e-13 2
ASPGD|ASPL0000065953 - symbol:AN7300 species:162425 "Emer... 150 4.4e-13 2
UNIPROTKB|F1NP02 - symbol:PHF21A "Uncharacterized protein... 181 5.2e-13 1
UNIPROTKB|C9J9G2 - symbol:PHF12 "PHD finger protein 12" s... 146 5.8e-13 2
UNIPROTKB|F1P5P6 - symbol:PHF21A "Uncharacterized protein... 181 5.9e-13 1
UNIPROTKB|F1M5S0 - symbol:RGD1560612 "Protein RGD1560612"... 180 6.1e-13 1
RGD|1560612 - symbol:Phf21a "PHD finger protein 21A" spec... 180 7.4e-13 1
MGI|MGI:2384756 - symbol:Phf21a "PHD finger protein 21A" ... 180 7.7e-13 1
TAIR|locus:2162509 - symbol:AT5G22760 "AT5G22760" species... 117 8.0e-13 2
ZFIN|ZDB-GENE-030131-6456 - symbol:phf21ab "PHD finger pr... 181 8.0e-13 1
UNIPROTKB|Q2TAK2 - symbol:PHF12 "PHF12 protein" species:9... 146 9.4e-13 2
FB|FBgn0023395 - symbol:Chd3 "Chd3" species:7227 "Drosoph... 170 9.7e-13 2
ZFIN|ZDB-GENE-030131-5913 - symbol:trim24 "tripartite mot... 160 1.2e-12 2
UNIPROTKB|I3LQA6 - symbol:AIRE "Uncharacterized protein" ... 177 1.3e-12 1
UNIPROTKB|Q96QT6 - symbol:PHF12 "PHD finger protein 12" s... 146 1.4e-12 2
UNIPROTKB|F1NX04 - symbol:PHF12 "Uncharacterized protein"... 146 1.4e-12 2
ZFIN|ZDB-GENE-030424-1 - symbol:kdm5bb "lysine (K)-specif... 126 1.5e-12 2
ZFIN|ZDB-GENE-030131-3876 - symbol:phf12a "PHD finger pro... 141 1.6e-12 2
UNIPROTKB|F1NW66 - symbol:Gga.49064 "Uncharacterized prot... 133 1.6e-12 2
WARNING: Descriptions of 423 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0262519 [details] [associations]
symbol:Mi-2 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=IDA;NAS] [GO:0005634
"nucleus" evidence=ISS;IDA;NAS] [GO:0004003 "ATP-dependent DNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0016581 "NuRD complex" evidence=ISS;TAS]
[GO:0006333 "chromatin assembly or disassembly" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS;IDA] [GO:0003678 "DNA
helicase activity" evidence=ISS] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0042766 "nucleosome mobilization" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007517 "muscle
organ development" evidence=IMP] [GO:0048813 "dendrite
morphogenesis" evidence=IMP] [GO:0031491 "nucleosome binding"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0070615
"nucleosome-dependent ATPase activity" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 EMBL:AE014296 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0000122
GO:GO:0048813 GO:GO:0007517 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004003 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005700 GO:GO:0042766 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0016581 InterPro:IPR023780
PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
EMBL:AF119716 EMBL:AY113368 RefSeq:NP_001163476.1
RefSeq:NP_649154.2 UniGene:Dm.28317 ProteinModelPortal:O97159
SMR:O97159 DIP:DIP-22862N IntAct:O97159 MINT:MINT-864813
STRING:O97159 PaxDb:O97159 EnsemblMetazoa:FBtr0074919
EnsemblMetazoa:FBtr0302046 GeneID:40170 KEGG:dme:Dmel_CG8103
CTD:40170 FlyBase:FBgn0262519 InParanoid:O97159 OrthoDB:EOG4T76J4
ChiTaRS:Mi-2 GenomeRNAi:40170 NextBio:817384 Bgee:O97159
GermOnline:CG8103 Uniprot:O97159
Length = 1982
Score = 426 (155.0 bits), Expect = 2.2e-38, P = 2.2e-38
Identities = 73/128 (57%), Positives = 89/128 (69%)
Query: 5 QDLQTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPET 64
+D + EHQDYCEVCQQGGEIILCDTCPRAYHL CL+PELDE PEGKWSCP C +DG
Sbjct: 370 EDGEHEHQDYCEVCQQGGEIILCDTCPRAYHLVCLEPELDEPPEGKWSCPHCEADG---- 425
Query: 65 ASPPAEEVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKCSC 124
+ E+ E + C CK G + L C++C +YH CL P++ +P W+CP+CSC
Sbjct: 426 GAAEEEDDDEHQEFCRVCKD-GGELLCCDSCPSAYHTFCLNPPLD-TIPDGDWRCPRCSC 483
Query: 125 PPLPGKLE 132
PPL GK E
Sbjct: 484 PPLTGKAE 491
>UNIPROTKB|J9NRN3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 EMBL:AAEX03003895
EMBL:AAEX03003896 EMBL:AAEX03003897 Ensembl:ENSCAFT00000044104
Uniprot:J9NRN3
Length = 1195
Score = 413 (150.4 bits), Expect = 2.4e-37, P = 2.4e-37
Identities = 74/134 (55%), Positives = 90/134 (67%)
Query: 8 QTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDG---PPET 64
+T+HQDYCEVCQQGGEIILCDTCPRAYHL CLDPEL++ PEGKWSCP C +G P+
Sbjct: 313 ETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKD 372
Query: 65 ASPPAEE--VKEKE----VLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWK 118
EE +E+E C CK G + L C+ C SYH HCL P+ E+P W
Sbjct: 373 DDDEEEEGGCEEEEDDHMEFCRVCKD-GGELLCCDACPSSYHLHCLNPPLP-EIPNGEWL 430
Query: 119 CPKCSCPPLPGKLE 132
CP+C+CPPL GK++
Sbjct: 431 CPRCTCPPLKGKVQ 444
Score = 189 (71.6 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 28/58 (48%), Positives = 40/58 (68%)
Query: 5 QDLQTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPP 62
++ + +H ++C VC+ GGE++ CD CP +YHL CL+P L E P G+W CPRC PP
Sbjct: 383 EEEEDDHMEFCRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCTC--PP 438
>UNIPROTKB|F2Z2R5 [details] [associations]
symbol:CHD5 "Chromodomain-helicase-DNA-binding protein 5"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:AL031847
GO:GO:0008026 InterPro:IPR023780 EMBL:AL035406 HGNC:HGNC:16816
ChiTaRS:CHD5 IPI:IPI00444866 ProteinModelPortal:F2Z2R5 SMR:F2Z2R5
Ensembl:ENST00000496404 ArrayExpress:F2Z2R5 Bgee:F2Z2R5
Uniprot:F2Z2R5
Length = 1225
Score = 413 (150.4 bits), Expect = 2.5e-37, P = 2.5e-37
Identities = 74/134 (55%), Positives = 90/134 (67%)
Query: 8 QTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDG---PPET 64
+T+HQDYCEVCQQGGEIILCDTCPRAYHL CLDPEL++ PEGKWSCP C +G P+
Sbjct: 339 ETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKD 398
Query: 65 ASPPAEE--VKEKE----VLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWK 118
EE +E+E C CK G + L C+ C SYH HCL P+ E+P W
Sbjct: 399 DDDEEEEGGCEEEEDDHMEFCRVCKD-GGELLCCDACPSSYHLHCLNPPLP-EIPNGEWL 456
Query: 119 CPKCSCPPLPGKLE 132
CP+C+CPPL GK++
Sbjct: 457 CPRCTCPPLKGKVQ 470
Score = 189 (71.6 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 28/58 (48%), Positives = 40/58 (68%)
Query: 5 QDLQTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPP 62
++ + +H ++C VC+ GGE++ CD CP +YHL CL+P L E P G+W CPRC PP
Sbjct: 409 EEEEDDHMEFCRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCTC--PP 464
>UNIPROTKB|F1SSZ2 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:FP102454 Ensembl:ENSSSCT00000019561 Uniprot:F1SSZ2
Length = 1667
Score = 413 (150.4 bits), Expect = 4.2e-37, P = 4.2e-37
Identities = 74/134 (55%), Positives = 90/134 (67%)
Query: 8 QTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDG---PPET 64
+T+HQDYCEVCQQGGEIILCDTCPRAYHL CLDPEL++ PEGKWSCP C +G P+
Sbjct: 255 ETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKD 314
Query: 65 ASPPAEE--VKEKE----VLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWK 118
EE +E+E C CK G + L C+ C SYH HCL P+ E+P W
Sbjct: 315 DDDEEEEGGCEEEEDDHMEFCRVCKD-GGELLCCDACPSSYHLHCLNPPLP-EIPNGEWL 372
Query: 119 CPKCSCPPLPGKLE 132
CP+C+CPPL GK++
Sbjct: 373 CPRCTCPPLKGKVQ 386
Score = 189 (71.6 bits), Expect = 2.9e-13, P = 2.9e-13
Identities = 28/58 (48%), Positives = 40/58 (68%)
Query: 5 QDLQTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPP 62
++ + +H ++C VC+ GGE++ CD CP +YHL CL+P L E P G+W CPRC PP
Sbjct: 325 EEEEDDHMEFCRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCTC--PP 380
>UNIPROTKB|F1RIM3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:FP102454 Ensembl:ENSSSCT00000003736 Uniprot:F1RIM3
Length = 1723
Score = 413 (150.4 bits), Expect = 4.4e-37, P = 4.4e-37
Identities = 74/134 (55%), Positives = 90/134 (67%)
Query: 8 QTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDG---PPET 64
+T+HQDYCEVCQQGGEIILCDTCPRAYHL CLDPEL++ PEGKWSCP C +G P+
Sbjct: 271 ETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKD 330
Query: 65 ASPPAEE--VKEKE----VLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWK 118
EE +E+E C CK G + L C+ C SYH HCL P+ E+P W
Sbjct: 331 DDDEEEEGGCEEEEDDHMEFCRVCKD-GGELLCCDACPSSYHLHCLNPPLP-EIPNGEWL 388
Query: 119 CPKCSCPPLPGKLE 132
CP+C+CPPL GK++
Sbjct: 389 CPRCTCPPLKGKVQ 402
Score = 189 (71.6 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
Identities = 28/58 (48%), Positives = 40/58 (68%)
Query: 5 QDLQTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPP 62
++ + +H ++C VC+ GGE++ CD CP +YHL CL+P L E P G+W CPRC PP
Sbjct: 341 EEEEDDHMEFCRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCTC--PP 396
Score = 37 (18.1 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 63 ETASPPAEEVKEKEVLCAKCK 83
E A P E++ ++EVL K K
Sbjct: 1554 EKAQPSPEQLPKEEVLPEKEK 1574
>UNIPROTKB|E2R1M3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:AAEX03003895 EMBL:AAEX03003896 EMBL:AAEX03003897
Ensembl:ENSCAFT00000031086 Uniprot:E2R1M3
Length = 1812
Score = 413 (150.4 bits), Expect = 4.8e-37, P = 4.8e-37
Identities = 74/134 (55%), Positives = 90/134 (67%)
Query: 8 QTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDG---PPET 64
+T+HQDYCEVCQQGGEIILCDTCPRAYHL CLDPEL++ PEGKWSCP C +G P+
Sbjct: 202 ETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKD 261
Query: 65 ASPPAEE--VKEKE----VLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWK 118
EE +E+E C CK G + L C+ C SYH HCL P+ E+P W
Sbjct: 262 DDDEEEEGGCEEEEDDHMEFCRVCKD-GGELLCCDACPSSYHLHCLNPPLP-EIPNGEWL 319
Query: 119 CPKCSCPPLPGKLE 132
CP+C+CPPL GK++
Sbjct: 320 CPRCTCPPLKGKVQ 333
Score = 189 (71.6 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 28/58 (48%), Positives = 40/58 (68%)
Query: 5 QDLQTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPP 62
++ + +H ++C VC+ GGE++ CD CP +YHL CL+P L E P G+W CPRC PP
Sbjct: 272 EEEEDDHMEFCRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCTC--PP 327
>RGD|1582725 [details] [associations]
symbol:Chd5 "chromodomain helicase DNA binding protein 5"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1582725 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 OrthoDB:EOG4WH8JX
IPI:IPI00948282 Ensembl:ENSRNOT00000067364 UCSC:RGD:1582725
ArrayExpress:D4A5U0 Uniprot:D4A5U0
Length = 1940
Score = 413 (150.4 bits), Expect = 5.2e-37, P = 5.2e-37
Identities = 74/134 (55%), Positives = 90/134 (67%)
Query: 8 QTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDG---PPET 64
+T+HQDYCEVCQQGGEIILCDTCPRAYHL CLDPEL++ PEGKWSCP C +G P+
Sbjct: 337 ETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKD 396
Query: 65 ASPPAEE--VKEKE----VLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWK 118
EE +E+E C CK G + L C+ C SYH HCL P+ E+P W
Sbjct: 397 DDEEEEEGGCEEEEDDHMEFCRVCKD-GGELLCCDACPSSYHLHCLNPPLP-EIPNGEWL 454
Query: 119 CPKCSCPPLPGKLE 132
CP+C+CPPL GK++
Sbjct: 455 CPRCTCPPLKGKVQ 468
Score = 189 (71.6 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 28/58 (48%), Positives = 40/58 (68%)
Query: 5 QDLQTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPP 62
++ + +H ++C VC+ GGE++ CD CP +YHL CL+P L E P G+W CPRC PP
Sbjct: 407 EEEEDDHMEFCRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCTC--PP 462
>UNIPROTKB|Q8TDI0 [details] [associations]
symbol:CHD5 "Chromodomain-helicase-DNA-binding protein 5"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
EMBL:AF425231 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:AL031847
GO:GO:0008026 InterPro:IPR023780 PROSITE:PS00598
HOGENOM:HOG000231124 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326 OrthoDB:EOG4WH8JX
EMBL:AL035406 EMBL:AL117491 EMBL:AB007913 IPI:IPI00152535
PIR:T17269 RefSeq:NP_056372.1 UniGene:Hs.522898
ProteinModelPortal:Q8TDI0 SMR:Q8TDI0 IntAct:Q8TDI0 STRING:Q8TDI0
PhosphoSite:Q8TDI0 DMDM:51701343 PaxDb:Q8TDI0 PRIDE:Q8TDI0
DNASU:26038 Ensembl:ENST00000262450 GeneID:26038 KEGG:hsa:26038
UCSC:uc001amb.2 CTD:26038 GeneCards:GC01M006096 HGNC:HGNC:16816
HPA:HPA015809 MIM:610771 neXtProt:NX_Q8TDI0 PharmGKB:PA134969178
InParanoid:Q8TDI0 KO:K14435 OMA:KRIDDGD PhylomeDB:Q8TDI0
ChiTaRS:CHD5 GenomeRNAi:26038 NextBio:47863 ArrayExpress:Q8TDI0
Bgee:Q8TDI0 CleanEx:HS_CHD5 Genevestigator:Q8TDI0
GermOnline:ENSG00000116254 Uniprot:Q8TDI0
Length = 1954
Score = 413 (150.4 bits), Expect = 5.3e-37, P = 5.3e-37
Identities = 74/134 (55%), Positives = 90/134 (67%)
Query: 8 QTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDG---PPET 64
+T+HQDYCEVCQQGGEIILCDTCPRAYHL CLDPEL++ PEGKWSCP C +G P+
Sbjct: 339 ETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKD 398
Query: 65 ASPPAEE--VKEKE----VLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWK 118
EE +E+E C CK G + L C+ C SYH HCL P+ E+P W
Sbjct: 399 DDDEEEEGGCEEEEDDHMEFCRVCKD-GGELLCCDACPSSYHLHCLNPPLP-EIPNGEWL 456
Query: 119 CPKCSCPPLPGKLE 132
CP+C+CPPL GK++
Sbjct: 457 CPRCTCPPLKGKVQ 470
Score = 189 (71.6 bits), Expect = 3.5e-13, P = 3.5e-13
Identities = 28/58 (48%), Positives = 40/58 (68%)
Query: 5 QDLQTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPP 62
++ + +H ++C VC+ GGE++ CD CP +YHL CL+P L E P G+W CPRC PP
Sbjct: 409 EEEEDDHMEFCRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCTC--PP 464
>UNIPROTKB|F1NH78 [details] [associations]
symbol:F1NH78 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:AADN02040929 EMBL:AADN02040930 IPI:IPI00571784
Ensembl:ENSGALT00000023340 ArrayExpress:F1NH78 Uniprot:F1NH78
Length = 1781
Score = 412 (150.1 bits), Expect = 5.9e-37, P = 5.9e-37
Identities = 75/135 (55%), Positives = 90/135 (66%)
Query: 8 QTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDG---PPET 64
+T+HQDYCEVCQQGGEIILCDTCPRAYHL CLDPEL++ PEGKWSCP C +G P+
Sbjct: 269 ETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKE 328
Query: 65 ASPPAEEVKEKEV-----LCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKC 119
EE E+E C CK G + L C+TC SYH HCL P+ E+P W C
Sbjct: 329 EEDEEEEGGEEEEDDHMEFCRVCKD-GGELLCCDTCPSSYHLHCLNPPLP-EIPNGEWLC 386
Query: 120 PKCS--CPPLPGKLE 132
P+C+ CPPL GK++
Sbjct: 387 PRCTPQCPPLKGKVQ 401
Score = 202 (76.2 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 29/58 (50%), Positives = 41/58 (70%)
Query: 5 QDLQTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPP 62
++ + +H ++C VC+ GGE++ CDTCP +YHL CL+P L E P G+W CPRC PP
Sbjct: 338 EEEEDDHMEFCRVCKDGGELLCCDTCPSSYHLHCLNPPLPEIPNGEWLCPRCTPQCPP 395
>UNIPROTKB|H7C2H0 [details] [associations]
symbol:CHD3 "Chromodomain-helicase-DNA-binding protein 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001841
InterPro:IPR009071 InterPro:IPR000953 InterPro:IPR001965
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00628 Pfam:PF08073
PROSITE:PS50013 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
SMART:SM00298 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR023780 HGNC:HGNC:1918 ChiTaRS:CHD3 EMBL:AC104581
GO:GO:0016818 Ensembl:ENST00000452447 Uniprot:H7C2H0
Length = 525
Score = 396 (144.5 bits), Expect = 8.0e-37, P = 8.0e-37
Identities = 73/142 (51%), Positives = 88/142 (61%)
Query: 4 IQDLQTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPE 63
+ +T+HQDYCEVCQQGGEIILCDTCPRAYHL CLDPELD PEGKWSCP C +G
Sbjct: 242 VDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQW 301
Query: 64 TASPPAEEVKE-------KEV------LCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEG 110
A EE +E KE C CK G + L C+ C SYH HCL P+
Sbjct: 302 EAKEEEEEYEEEGEEEGEKEEEDDHMEYCRVCKD-GGELLCCDACISSYHIHCLNPPLP- 359
Query: 111 ELPTSGWKCPKCSCPPLPGKLE 132
++P W CP+C+CP L G+++
Sbjct: 360 DIPNGEWLCPRCTCPVLKGRVQ 381
>UNIPROTKB|F1MFF9 [details] [associations]
symbol:Bt.62145 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:DAAA02043090 IPI:IPI00688794
Ensembl:ENSBTAT00000010688 Uniprot:F1MFF9
Length = 1852
Score = 410 (149.4 bits), Expect = 1.0e-36, P = 1.0e-36
Identities = 73/134 (54%), Positives = 90/134 (67%)
Query: 8 QTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDG---PPET 64
+T+HQDYCEVCQQGGEIILCDTCPRAYHL CLDPEL++ PEGKWSCP C +G P+
Sbjct: 284 ETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKD 343
Query: 65 ASPPAEE--VKEKE----VLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWK 118
+E +E+E C CK G + L C+ C SYH HCL P+ E+P W
Sbjct: 344 DDDDEDEGGCEEEEDDHMEFCRVCKD-GGELLCCDACPSSYHLHCLNPPLP-EIPNGEWL 401
Query: 119 CPKCSCPPLPGKLE 132
CP+C+CPPL GK++
Sbjct: 402 CPRCTCPPLKGKVQ 415
Score = 189 (71.6 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 28/58 (48%), Positives = 40/58 (68%)
Query: 5 QDLQTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPP 62
++ + +H ++C VC+ GGE++ CD CP +YHL CL+P L E P G+W CPRC PP
Sbjct: 354 EEEEDDHMEFCRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCTC--PP 409
>UNIPROTKB|F1LPP8 [details] [associations]
symbol:Chd3 "Protein Chd3" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] InterPro:IPR001841
InterPro:IPR009071 InterPro:IPR000953 InterPro:IPR001965
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00628 Pfam:PF08073
PROSITE:PS50013 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
SMART:SM00298 Pfam:PF00385 RGD:1311923 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
GeneTree:ENSGT00560000076896 GO:GO:0016818 IPI:IPI00779114
Ensembl:ENSRNOT00000057058 ArrayExpress:F1LPP8 Uniprot:F1LPP8
Length = 710
Score = 395 (144.1 bits), Expect = 5.3e-36, P = 5.3e-36
Identities = 72/141 (51%), Positives = 88/141 (62%)
Query: 4 IQDLQTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPE 63
+ +T+HQDYCEVCQQGGEIILCDTCPRAYHL CLDPELD PEGKWSCP C +G
Sbjct: 385 VDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQW 444
Query: 64 TASPPAEEVKE------KEV------LCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGE 111
A E+ +E KE C CK G + L C+ C SYH HCL P+ +
Sbjct: 445 EAKEEEEDYEEEGEEGEKEEEDDHMEYCRVCKD-GGELLCCDACISSYHIHCLNPPLP-D 502
Query: 112 LPTSGWKCPKCSCPPLPGKLE 132
+P W CP+C+CP L G+++
Sbjct: 503 IPNGEWLCPRCTCPVLKGRVQ 523
>UNIPROTKB|F1SLR5 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1108 KO:K11643 OMA:ERMLLCR EMBL:CU914489 EMBL:GACC01000070
RefSeq:XP_003126577.3 UniGene:Ssc.25044 Ensembl:ENSSSCT00000000759
GeneID:100515610 KEGG:ssc:100515610 Uniprot:F1SLR5
Length = 1912
Score = 393 (143.4 bits), Expect = 1.7e-35, Sum P(2) = 1.7e-35
Identities = 70/144 (48%), Positives = 87/144 (60%)
Query: 4 IQDLQTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPP- 62
+ +T+HQDYCEVCQQGGEIILCDTCPRAYH+ CLDP++++ PEGKWSCP C +G
Sbjct: 362 VDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQW 421
Query: 63 --------------ETASPPAEEVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPI 108
E P EE C CK G + L C+TC SYH HCL P+
Sbjct: 422 EAKEDNSEGEEILEEVGGDPEEEDDHHMEFCRVCKD-GGELLCCDTCPSSYHIHCLNPPL 480
Query: 109 EGELPTSGWKCPKCSCPPLPGKLE 132
E+P W CP+C+CP L GK++
Sbjct: 481 P-EIPNGEWLCPRCTCPALKGKVQ 503
Score = 37 (18.1 bits), Expect = 1.7e-35, Sum P(2) = 1.7e-35
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 121 KCSCPPLPGKLEDMASLLRLP 141
+C+ PP+P ED L+ P
Sbjct: 1593 ECTQPPVPAS-EDEKVLIEPP 1612
>UNIPROTKB|E2RTI2 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR EMBL:AAEX03003635
EMBL:AAEX03003636 Ensembl:ENSCAFT00000026729 Uniprot:E2RTI2
Length = 1998
Score = 398 (145.2 bits), Expect = 2.2e-35, P = 2.2e-35
Identities = 72/141 (51%), Positives = 87/141 (61%)
Query: 4 IQDLQTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPE 63
+ +T+HQDYCEVCQQGGEIILCDTCPRAYHL CLDPELD PEGKWSCP C +G
Sbjct: 370 VDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQW 429
Query: 64 TASPPAEEVKEKEV------------LCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGE 111
A EE +E E C CK G + L C+ C SYH HCL P+ +
Sbjct: 430 EAKEEEEEYEEGEEEGEKEEEDDHMEYCRVCKD-GGELLCCDACISSYHIHCLNPPLP-D 487
Query: 112 LPTSGWKCPKCSCPPLPGKLE 132
+P W CP+C+CP L G+++
Sbjct: 488 IPNGEWLCPRCTCPVLKGRVQ 508
>UNIPROTKB|F1N544 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR EMBL:DAAA02048806
IPI:IPI00716282 Ensembl:ENSBTAT00000019119 ArrayExpress:F1N544
Uniprot:F1N544
Length = 1998
Score = 397 (144.8 bits), Expect = 2.8e-35, P = 2.8e-35
Identities = 74/142 (52%), Positives = 87/142 (61%)
Query: 4 IQDLQTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDG--- 60
I +T+HQDYCEVCQQGGEIILCDTCPRAYHL CLDPELD PEGKWSCP C +G
Sbjct: 367 IDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQW 426
Query: 61 ----PPETASPPAEEVKEKEV------LCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEG 110
E EE EKE C CK G + L C+ C SYH HCL P+
Sbjct: 427 EAKEEEEDYEEEGEEEGEKEEEDDHMEYCRVCKD-GGELLCCDACISSYHIHCLNPPLP- 484
Query: 111 ELPTSGWKCPKCSCPPLPGKLE 132
++P W CP+C+CP L G+++
Sbjct: 485 DIPNGEWLCPRCTCPVLKGRVQ 506
>UNIPROTKB|Q12873 [details] [associations]
symbol:CHD3 "Chromodomain-helicase-DNA-binding protein 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0004386 "helicase activity" evidence=NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0008270
"zinc ion binding" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007051 "spindle organization" evidence=IDA]
[GO:0005813 "centrosome" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0051297 "centrosome organization" evidence=IDA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=TAS] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=TAS] [GO:0016581 "NuRD complex" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0045111 "intermediate
filament cytoskeleton" evidence=IDA] InterPro:IPR001841
InterPro:IPR009071 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005737 GO:GO:0005813
EMBL:CH471108 GO:GO:0005730 GO:GO:0051297 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006357 GO:GO:0006351
GO:GO:0016568 Gene3D:1.10.30.10 GO:GO:0045111 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004003
InterPro:IPR019786 PROSITE:PS01359
Pathway_Interaction_DB:hdac_classi_pathway InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0007051 GO:GO:0016581 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 HOGENOM:HOG000231124
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1107 EMBL:U91543 EMBL:AF006515 EMBL:U08379 IPI:IPI00373870
IPI:IPI00411592 RefSeq:NP_001005271.2 RefSeq:NP_001005273.1
RefSeq:NP_005843.2 UniGene:Hs.25601 ProteinModelPortal:Q12873
SMR:Q12873 DIP:DIP-32496N IntAct:Q12873 MINT:MINT-1185641
STRING:Q12873 PhosphoSite:Q12873 DMDM:88911273 PaxDb:Q12873
PRIDE:Q12873 Ensembl:ENST00000330494 Ensembl:ENST00000358181
GeneID:1107 KEGG:hsa:1107 UCSC:uc002gje.2 UCSC:uc002gjf.2
GeneCards:GC17P007788 H-InvDB:HIX0013516 HGNC:HGNC:1918
HPA:HPA043368 MIM:602120 neXtProt:NX_Q12873 PharmGKB:PA26454
HOVERGEN:HBG005326 KO:K11642 PhylomeDB:Q12873 ChiTaRS:CHD3
GenomeRNAi:1107 NextBio:4590 ArrayExpress:Q12873 Bgee:Q12873
CleanEx:HS_CHD3 Genevestigator:Q12873 GermOnline:ENSG00000170004
Uniprot:Q12873
Length = 2000
Score = 396 (144.5 bits), Expect = 3.5e-35, P = 3.5e-35
Identities = 73/142 (51%), Positives = 88/142 (61%)
Query: 4 IQDLQTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPE 63
+ +T+HQDYCEVCQQGGEIILCDTCPRAYHL CLDPELD PEGKWSCP C +G
Sbjct: 371 VDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQW 430
Query: 64 TASPPAEEVKE-------KEV------LCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEG 110
A EE +E KE C CK G + L C+ C SYH HCL P+
Sbjct: 431 EAKEEEEEYEEEGEEEGEKEEEDDHMEYCRVCKD-GGELLCCDACISSYHIHCLNPPLP- 488
Query: 111 ELPTSGWKCPKCSCPPLPGKLE 132
++P W CP+C+CP L G+++
Sbjct: 489 DIPNGEWLCPRCTCPVLKGRVQ 510
>UNIPROTKB|E9PG89 [details] [associations]
symbol:CHD3 "Chromodomain-helicase-DNA-binding protein 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0006333 "chromatin assembly or
disassembly" evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IDA] InterPro:IPR001841 InterPro:IPR009071
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005730 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.30.10 GO:GO:0045111
GO:GO:0006333 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1107 RefSeq:NP_001005271.2 UniGene:Hs.25601 GeneID:1107
KEGG:hsa:1107 HGNC:HGNC:1918 KO:K11642 ChiTaRS:CHD3 GenomeRNAi:1107
NextBio:4590 EMBL:AC104581 IPI:IPI00465222
ProteinModelPortal:E9PG89 SMR:E9PG89 PRIDE:E9PG89
Ensembl:ENST00000380358 UCSC:uc002gjd.2 OMA:EPEPGYR
ArrayExpress:E9PG89 Bgee:E9PG89 Uniprot:E9PG89
Length = 2059
Score = 396 (144.5 bits), Expect = 3.7e-35, P = 3.7e-35
Identities = 73/142 (51%), Positives = 88/142 (61%)
Query: 4 IQDLQTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPE 63
+ +T+HQDYCEVCQQGGEIILCDTCPRAYHL CLDPELD PEGKWSCP C +G
Sbjct: 430 VDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQW 489
Query: 64 TASPPAEEVKE-------KEV------LCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEG 110
A EE +E KE C CK G + L C+ C SYH HCL P+
Sbjct: 490 EAKEEEEEYEEEGEEEGEKEEEDDHMEYCRVCKD-GGELLCCDACISSYHIHCLNPPLP- 547
Query: 111 ELPTSGWKCPKCSCPPLPGKLE 132
++P W CP+C+CP L G+++
Sbjct: 548 DIPNGEWLCPRCTCPVLKGRVQ 569
>RGD|1311923 [details] [associations]
symbol:Chd3 "chromodomain helicase DNA binding protein 3"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005813 "centrosome" evidence=ISO]
[GO:0006333 "chromatin assembly or disassembly" evidence=ISO]
[GO:0007051 "spindle organization" evidence=ISO] [GO:0016581 "NuRD
complex" evidence=ISO] [GO:0045111 "intermediate filament
cytoskeleton" evidence=ISO] [GO:0051297 "centrosome organization"
evidence=ISO] InterPro:IPR001841 InterPro:IPR009071
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326
IPI:IPI00369880 EMBL:AY903245 EMBL:AY903246 UniGene:Rn.232095
STRING:Q2KML1 UCSC:RGD:1311923 Genevestigator:Q2KML1 Uniprot:Q2KML1
Length = 1925
Score = 395 (144.1 bits), Expect = 4.3e-35, P = 4.3e-35
Identities = 72/141 (51%), Positives = 88/141 (62%)
Query: 4 IQDLQTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPE 63
+ +T+HQDYCEVCQQGGEIILCDTCPRAYHL CLDPELD PEGKWSCP C +G
Sbjct: 328 VDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQW 387
Query: 64 TASPPAEEVKE------KEV------LCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGE 111
A E+ +E KE C CK G + L C+ C SYH HCL P+ +
Sbjct: 388 EAKEEEEDYEEEGEEGEKEEEDDHMEYCRVCKD-GGELLCCDACISSYHIHCLNPPLP-D 445
Query: 112 LPTSGWKCPKCSCPPLPGKLE 132
+P W CP+C+CP L G+++
Sbjct: 446 IPNGEWLCPRCTCPVLKGRVQ 466
>UNIPROTKB|F1LPP7 [details] [associations]
symbol:Chd3 "Protein Chd3" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 IPI:IPI00369880
Ensembl:ENSRNOT00000057060 Uniprot:F1LPP7
Length = 2020
Score = 395 (144.1 bits), Expect = 4.6e-35, P = 4.6e-35
Identities = 72/141 (51%), Positives = 88/141 (62%)
Query: 4 IQDLQTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPE 63
+ +T+HQDYCEVCQQGGEIILCDTCPRAYHL CLDPELD PEGKWSCP C +G
Sbjct: 423 VDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQW 482
Query: 64 TASPPAEEVKE------KEV------LCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGE 111
A E+ +E KE C CK G + L C+ C SYH HCL P+ +
Sbjct: 483 EAKEEEEDYEEEGEEGEKEEEDDHMEYCRVCKD-GGELLCCDACISSYHIHCLNPPLP-D 540
Query: 112 LPTSGWKCPKCSCPPLPGKLE 132
+P W CP+C+CP L G+++
Sbjct: 541 IPNGEWLCPRCTCPVLKGRVQ 561
>UNIPROTKB|F1M7Q0 [details] [associations]
symbol:Chd3 "Protein Chd3" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR
IPI:IPI00959834 Ensembl:ENSRNOT00000012983 Uniprot:F1M7Q0
Length = 2054
Score = 395 (144.1 bits), Expect = 4.7e-35, P = 4.7e-35
Identities = 72/141 (51%), Positives = 88/141 (62%)
Query: 4 IQDLQTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPE 63
+ +T+HQDYCEVCQQGGEIILCDTCPRAYHL CLDPELD PEGKWSCP C +G
Sbjct: 423 VDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQW 482
Query: 64 TASPPAEEVKE------KEV------LCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGE 111
A E+ +E KE C CK G + L C+ C SYH HCL P+ +
Sbjct: 483 EAKEEEEDYEEEGEEGEKEEEDDHMEYCRVCKD-GGELLCCDACISSYHIHCLNPPLP-D 540
Query: 112 LPTSGWKCPKCSCPPLPGKLE 132
+P W CP+C+CP L G+++
Sbjct: 541 IPNGEWLCPRCTCPVLKGRVQ 561
>UNIPROTKB|E2RHA0 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1108 KO:K11643 EMBL:AAEX03015287 RefSeq:XP_867754.2
Ensembl:ENSCAFT00000023774 GeneID:477714 KEGG:cfa:477714
Uniprot:E2RHA0
Length = 1912
Score = 393 (143.4 bits), Expect = 6.9e-35, P = 6.9e-35
Identities = 70/144 (48%), Positives = 87/144 (60%)
Query: 4 IQDLQTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPP- 62
+ +T+HQDYCEVCQQGGEIILCDTCPRAYH+ CLDP++++ PEGKWSCP C +G
Sbjct: 362 VDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQW 421
Query: 63 --------------ETASPPAEEVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPI 108
E P EE C CK G + L C+TC SYH HCL P+
Sbjct: 422 EAKEDNSEGEEILEEVGGDPEEEDDHHMEFCRVCKD-GGELLCCDTCPSSYHIHCLNPPL 480
Query: 109 EGELPTSGWKCPKCSCPPLPGKLE 132
E+P W CP+C+CP L GK++
Sbjct: 481 P-EIPNGEWLCPRCTCPALKGKVQ 503
>MGI|MGI:1344380 [details] [associations]
symbol:Chd4 "chromodomain helicase DNA binding protein 4"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=ISO] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=ISO;IDA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016818
"hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0043234
"protein complex" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 MGI:MGI:1344380 Pfam:PF00385
GO:GO:0005524 GO:GO:0005737 GO:GO:0005813 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351
GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 PROSITE:PS00598
GeneTree:ENSGT00560000076896 HOGENOM:HOG000231124
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
HOVERGEN:HBG005326 CTD:1108 KO:K11643 OrthoDB:EOG4WH8JX
ChiTaRS:CHD4 EMBL:BC058578 IPI:IPI00396802 RefSeq:NP_666091.1
UniGene:Mm.333388 ProteinModelPortal:Q6PDQ2 SMR:Q6PDQ2
DIP:DIP-59651N IntAct:Q6PDQ2 STRING:Q6PDQ2 PhosphoSite:Q6PDQ2
PaxDb:Q6PDQ2 PRIDE:Q6PDQ2 Ensembl:ENSMUST00000056889 GeneID:107932
KEGG:mmu:107932 UCSC:uc009dtk.1 NextBio:359735 PMAP-CutDB:Q6PDQ2
Bgee:Q6PDQ2 CleanEx:MM_CHD4 Genevestigator:Q6PDQ2
GermOnline:ENSMUSG00000063870 Uniprot:Q6PDQ2
Length = 1915
Score = 393 (143.4 bits), Expect = 6.9e-35, P = 6.9e-35
Identities = 70/144 (48%), Positives = 87/144 (60%)
Query: 4 IQDLQTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPP- 62
+ +T+HQDYCEVCQQGGEIILCDTCPRAYH+ CLDP++++ PEGKWSCP C +G
Sbjct: 355 VDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQW 414
Query: 63 --------------ETASPPAEEVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPI 108
E P EE C CK G + L C+TC SYH HCL P+
Sbjct: 415 EAKEDNSEGEEILEEVGGDPEEEDDHHMEFCRVCKD-GGELLCCDTCPSSYHIHCLNPPL 473
Query: 109 EGELPTSGWKCPKCSCPPLPGKLE 132
E+P W CP+C+CP L GK++
Sbjct: 474 P-EIPNGEWLCPRCTCPALKGKVQ 496
>UNIPROTKB|E9PU01 [details] [associations]
symbol:Chd4 "Protein Chd4" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 RGD:620064 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
IPI:IPI01016558 PRIDE:E9PU01 Ensembl:ENSRNOT00000055970
ArrayExpress:E9PU01 Uniprot:E9PU01
Length = 1915
Score = 393 (143.4 bits), Expect = 6.9e-35, P = 6.9e-35
Identities = 70/144 (48%), Positives = 87/144 (60%)
Query: 4 IQDLQTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPP- 62
+ +T+HQDYCEVCQQGGEIILCDTCPRAYH+ CLDP++++ PEGKWSCP C +G
Sbjct: 355 VDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQW 414
Query: 63 --------------ETASPPAEEVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPI 108
E P EE C CK G + L C+TC SYH HCL P+
Sbjct: 415 EAKEDNSEGEEILEEVGGDPEEEDDHHMEFCRVCKD-GGELLCCDTCPSSYHIHCLNPPL 473
Query: 109 EGELPTSGWKCPKCSCPPLPGKLE 132
E+P W CP+C+CP L GK++
Sbjct: 474 P-EIPNGEWLCPRCTCPALKGKVQ 496
>UNIPROTKB|J9NW81 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:ERMLLCR EMBL:AAEX03015287 Ensembl:ENSCAFT00000048002
Uniprot:J9NW81
Length = 1932
Score = 393 (143.4 bits), Expect = 7.0e-35, P = 7.0e-35
Identities = 70/144 (48%), Positives = 87/144 (60%)
Query: 4 IQDLQTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPP- 62
+ +T+HQDYCEVCQQGGEIILCDTCPRAYH+ CLDP++++ PEGKWSCP C +G
Sbjct: 382 VDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQW 441
Query: 63 --------------ETASPPAEEVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPI 108
E P EE C CK G + L C+TC SYH HCL P+
Sbjct: 442 EAKEDNSEGEEILEEVGGDPEEEDDHHMEFCRVCKD-GGELLCCDTCPSSYHIHCLNPPL 500
Query: 109 EGELPTSGWKCPKCSCPPLPGKLE 132
E+P W CP+C+CP L GK++
Sbjct: 501 P-EIPNGEWLCPRCTCPALKGKVQ 523
>UNIPROTKB|F1N3F6 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:ERMLLCR EMBL:DAAA02014463 IPI:IPI00877578
Ensembl:ENSBTAT00000019612 ArrayExpress:F1N3F6 Uniprot:F1N3F6
Length = 1934
Score = 393 (143.4 bits), Expect = 7.0e-35, P = 7.0e-35
Identities = 70/144 (48%), Positives = 87/144 (60%)
Query: 4 IQDLQTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPP- 62
+ +T+HQDYCEVCQQGGEIILCDTCPRAYH+ CLDP++++ PEGKWSCP C +G
Sbjct: 384 VDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQW 443
Query: 63 --------------ETASPPAEEVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPI 108
E P EE C CK G + L C+TC SYH HCL P+
Sbjct: 444 EAKEDNSEGEEILEEVGGDPEEEDDHHMEFCRVCKD-GGELLCCDTCPSSYHIHCLNPPL 502
Query: 109 EGELPTSGWKCPKCSCPPLPGKLE 132
E+P W CP+C+CP L GK++
Sbjct: 503 P-EIPNGEWLCPRCTCPALKGKVQ 525
>UNIPROTKB|F1LM59 [details] [associations]
symbol:Chd4 "Protein Chd4" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 RGD:620064 GO:GO:0005524 GO:GO:0005737 GO:GO:0005813
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
IPI:IPI00365698 PRIDE:F1LM59 Ensembl:ENSRNOT00000024864
ArrayExpress:F1LM59 Uniprot:F1LM59
Length = 1945
Score = 393 (143.4 bits), Expect = 7.1e-35, P = 7.1e-35
Identities = 70/144 (48%), Positives = 87/144 (60%)
Query: 4 IQDLQTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPP- 62
+ +T+HQDYCEVCQQGGEIILCDTCPRAYH+ CLDP++++ PEGKWSCP C +G
Sbjct: 383 VDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQW 442
Query: 63 --------------ETASPPAEEVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPI 108
E P EE C CK G + L C+TC SYH HCL P+
Sbjct: 443 EAKEDNSEGEEILEEVGGDPEEEDDHHMEFCRVCKD-GGELLCCDTCPSSYHIHCLNPPL 501
Query: 109 EGELPTSGWKCPKCSCPPLPGKLE 132
E+P W CP+C+CP L GK++
Sbjct: 502 P-EIPNGEWLCPRCTCPALKGKVQ 524
>UNIPROTKB|F1ST12 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 CTD:1107 KO:K11642 OMA:EPEPGYR
EMBL:CU972380 RefSeq:XP_003132000.1 UniGene:Ssc.1663
Ensembl:ENSSSCT00000019548 GeneID:100188906 KEGG:ssc:100188906
Uniprot:F1ST12
Length = 2002
Score = 393 (143.4 bits), Expect = 7.4e-35, P = 7.4e-35
Identities = 73/142 (51%), Positives = 87/142 (61%)
Query: 4 IQDLQTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPE 63
+ +T+HQDYCEVCQQGGEIILCDTCPRAYHL CLDPELD PEGKWSCP C +G
Sbjct: 371 VDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHCEKEGVQW 430
Query: 64 TASPP-------AEEVKEKEV------LCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEG 110
A EE EKE C CK G + L C+ C SYH HCL P+
Sbjct: 431 EAKEEDDDYEEEGEEEGEKEEEDDHMEYCRVCKD-GGELLCCDACISSYHIHCLNPPLP- 488
Query: 111 ELPTSGWKCPKCSCPPLPGKLE 132
++P W CP+C+CP L G+++
Sbjct: 489 DIPNGEWLCPRCTCPVLKGRVQ 510
>UNIPROTKB|F5GWX5 [details] [associations]
symbol:CHD4 "Chromodomain-helicase-DNA-binding protein 4"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:AC006064
IPI:IPI00000846 HGNC:HGNC:1919 ChiTaRS:CHD4
ProteinModelPortal:F5GWX5 SMR:F5GWX5 PRIDE:F5GWX5
Ensembl:ENST00000544040 UCSC:uc001qpn.3 ArrayExpress:F5GWX5
Bgee:F5GWX5 Uniprot:F5GWX5
Length = 1905
Score = 389 (142.0 bits), Expect = 1.8e-34, P = 1.8e-34
Identities = 71/144 (49%), Positives = 90/144 (62%)
Query: 4 IQDLQTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPE 63
+ +T+HQDYCEVCQQGGEIILCDTCPRAYH+ CLDP++++ PEGKWSCP C +G
Sbjct: 355 VDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQW 414
Query: 64 TASPPAEEVKE--KEV-------------LCAKCKSPGDQFLLCETCNGSYHPHCLPDPI 108
A E +E +EV C CK G + L C+TC SYH HCL P+
Sbjct: 415 EAKEDNSEGEEILEEVGGDLEEEDDHHMEFCRVCKD-GGELLCCDTCPSSYHIHCLNPPL 473
Query: 109 EGELPTSGWKCPKCSCPPLPGKLE 132
E+P W CP+C+CP L GK++
Sbjct: 474 P-EIPNGEWLCPRCTCPALKGKVQ 496
>UNIPROTKB|Q14839 [details] [associations]
symbol:CHD4 "Chromodomain-helicase-DNA-binding protein 4"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005813 "centrosome" evidence=IDA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006357 GO:GO:0006351 GO:GO:0016568
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004003 InterPro:IPR019786 PROSITE:PS01359
Pathway_Interaction_DB:hdac_classi_pathway InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016581 InterPro:IPR023780 PROSITE:PS00598
HOGENOM:HOG000231124 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326 EMBL:X86691
EMBL:AC006064 EMBL:BC038596 IPI:IPI00000846 IPI:IPI00455210
RefSeq:NP_001264.2 UniGene:Hs.162233 PDB:1MM2 PDB:1MM3 PDB:2EE1
PDB:2L5U PDB:2L75 PDBsum:1MM2 PDBsum:1MM3 PDBsum:2EE1 PDBsum:2L5U
PDBsum:2L75 ProteinModelPortal:Q14839 SMR:Q14839 DIP:DIP-31183N
IntAct:Q14839 MINT:MINT-349766 STRING:Q14839 PhosphoSite:Q14839
DMDM:311033360 PaxDb:Q14839 PRIDE:Q14839 DNASU:1108
Ensembl:ENST00000309577 Ensembl:ENST00000357008
Ensembl:ENST00000544484 GeneID:1108 KEGG:hsa:1108 UCSC:uc001qpo.3
UCSC:uc001qpp.3 CTD:1108 GeneCards:GC12M006679 H-InvDB:HIX0201859
HGNC:HGNC:1919 HPA:HPA012008 MIM:603277 neXtProt:NX_Q14839
PharmGKB:PA26455 KO:K11643 OMA:ERMLLCR OrthoDB:EOG4WH8JX
ChiTaRS:CHD4 EvolutionaryTrace:Q14839 GenomeRNAi:1108 NextBio:4598
PMAP-CutDB:Q14839 ArrayExpress:Q14839 Bgee:Q14839 CleanEx:HS_CHD4
Genevestigator:Q14839 GermOnline:ENSG00000111642 Uniprot:Q14839
Length = 1912
Score = 389 (142.0 bits), Expect = 1.8e-34, P = 1.8e-34
Identities = 71/144 (49%), Positives = 90/144 (62%)
Query: 4 IQDLQTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPE 63
+ +T+HQDYCEVCQQGGEIILCDTCPRAYH+ CLDP++++ PEGKWSCP C +G
Sbjct: 362 VDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQW 421
Query: 64 TASPPAEEVKE--KEV-------------LCAKCKSPGDQFLLCETCNGSYHPHCLPDPI 108
A E +E +EV C CK G + L C+TC SYH HCL P+
Sbjct: 422 EAKEDNSEGEEILEEVGGDLEEEDDHHMEFCRVCKD-GGELLCCDTCPSSYHIHCLNPPL 480
Query: 109 EGELPTSGWKCPKCSCPPLPGKLE 132
E+P W CP+C+CP L GK++
Sbjct: 481 P-EIPNGEWLCPRCTCPALKGKVQ 503
>UNIPROTKB|F1NH79 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:AADN02061139 EMBL:AADN02061140 EMBL:AADN02061141
EMBL:AADN02061142 EMBL:AADN02061143 IPI:IPI00598956
Ensembl:ENSGALT00000023339 OMA:DGEHEHQ Uniprot:F1NH79
Length = 1895
Score = 386 (140.9 bits), Expect = 3.8e-34, P = 3.8e-34
Identities = 70/144 (48%), Positives = 89/144 (61%)
Query: 4 IQDLQTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPE 63
+ +T+HQDYCEVCQQGGEIILCDTCPRAYH+ CLDP++++ PEGKWSCP C +G
Sbjct: 332 VDGYETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQW 391
Query: 64 TA---SPPAEEVKEKEV------------LCAKCKSPGDQFLLCETCNGSYHPHCLPDPI 108
A + EE+ E V C CK G + L C+ C SYH HCL P+
Sbjct: 392 EAKEDNSEGEEILEDVVGDAEEEDDHHMEFCRVCKD-GGELLCCDACPSSYHIHCLNPPL 450
Query: 109 EGELPTSGWKCPKCSCPPLPGKLE 132
E+P W CP+C+CP L GK++
Sbjct: 451 P-EIPNGEWLCPRCTCPALKGKVQ 473
>ZFIN|ZDB-GENE-041111-187 [details] [associations]
symbol:chd4a "chromodomain helicase DNA binding
protein 4a" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-041111-187
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:BX004850
IPI:IPI00962864 Ensembl:ENSDART00000005453 ArrayExpress:F1QWV5
Bgee:F1QWV5 Uniprot:F1QWV5
Length = 1930
Score = 381 (139.2 bits), Expect = 1.3e-33, P = 1.3e-33
Identities = 68/138 (49%), Positives = 87/138 (63%)
Query: 8 QTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRC----------- 56
+T+HQDYCEVCQQGGEIILCDTCPRAYH+ CLDP++++ PEG WSCP C
Sbjct: 349 ETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGTWSCPHCEKMGIQWEARE 408
Query: 57 -VSDGPPET-ASPPAEEVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPT 114
S+G + A AEE C CK G + L C++C SYH HCL P+ E+P
Sbjct: 409 DASEGEEDNEAGGEAEEDDHHMEFCRVCKD-GGELLCCDSCPSSYHIHCLNPPLP-EIPN 466
Query: 115 SGWKCPKCSCPPLPGKLE 132
W CP+C+CP + GK++
Sbjct: 467 GEWICPRCTCPSMKGKVQ 484
>WB|WBGene00000482 [details] [associations]
symbol:chd-3 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=TAS]
[GO:0040027 "negative regulation of vulval development"
evidence=IMP] [GO:0046580 "negative regulation of Ras protein
signal transduction" evidence=IMP] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0000118 "histone deacetylase
complex" evidence=ISS] [GO:0003682 "chromatin binding"
evidence=TAS] [GO:0003678 "DNA helicase activity" evidence=ISS]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003682 GO:GO:0006338
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0001709 GO:GO:0046580 GO:GO:0008026 InterPro:IPR023780
PROSITE:PS00598 GO:GO:0000118 GeneTree:ENSGT00560000076896
EMBL:AF308444 EMBL:Z67884 EMBL:Z67881 PIR:T20160 RefSeq:NP_510140.1
UniGene:Cel.16950 ProteinModelPortal:Q22516 SMR:Q22516
STRING:Q22516 PaxDb:Q22516 EnsemblMetazoa:T14G8.1 GeneID:181421
KEGG:cel:CELE_T14G8.1 UCSC:T14G8.1 CTD:181421 WormBase:T14G8.1
HOGENOM:HOG000231124 InParanoid:Q22516 OMA:INIIMEL NextBio:913870
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
Uniprot:Q22516
Length = 1787
Score = 320 (117.7 bits), Expect = 3.7e-27, P = 3.7e-27
Identities = 54/130 (41%), Positives = 75/130 (57%)
Query: 7 LQTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETAS 66
++ HQ+ CEVC Q GE++LCDTC RAYH+ C+D +++ PEG WSCP C GP +
Sbjct: 260 VEENHQENCEVCNQDGELMLCDTCTRAYHVACIDENMEQPPEGDWSCPHCEEHGP-DVLI 318
Query: 67 PPAEEVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKCSCPP 126
E K C CK + LLC+TC SYH +C+ P+ E+P W CP+C P
Sbjct: 319 VEEEPAKANMDYCRICKETSN-ILLCDTCPSSYHAYCIDPPLT-EIPEGEWSCPRCIIPE 376
Query: 127 LPGKLEDMAS 136
++E + S
Sbjct: 377 PAQRIEKILS 386
>UNIPROTKB|Q22516 [details] [associations]
symbol:chd-3 "Chromodomain-helicase-DNA-binding protein 3
homolog" species:6239 "Caenorhabditis elegans" [GO:0032508 "DNA
duplex unwinding" evidence=ISS] InterPro:IPR001841
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003682 GO:GO:0006338 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0001709 GO:GO:0046580
GO:GO:0008026 InterPro:IPR023780 PROSITE:PS00598 GO:GO:0000118
GeneTree:ENSGT00560000076896 EMBL:AF308444 EMBL:Z67884 EMBL:Z67881
PIR:T20160 RefSeq:NP_510140.1 UniGene:Cel.16950
ProteinModelPortal:Q22516 SMR:Q22516 STRING:Q22516 PaxDb:Q22516
EnsemblMetazoa:T14G8.1 GeneID:181421 KEGG:cel:CELE_T14G8.1
UCSC:T14G8.1 CTD:181421 WormBase:T14G8.1 HOGENOM:HOG000231124
InParanoid:Q22516 OMA:INIIMEL NextBio:913870 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 Uniprot:Q22516
Length = 1787
Score = 320 (117.7 bits), Expect = 3.7e-27, P = 3.7e-27
Identities = 54/130 (41%), Positives = 75/130 (57%)
Query: 7 LQTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETAS 66
++ HQ+ CEVC Q GE++LCDTC RAYH+ C+D +++ PEG WSCP C GP +
Sbjct: 260 VEENHQENCEVCNQDGELMLCDTCTRAYHVACIDENMEQPPEGDWSCPHCEEHGP-DVLI 318
Query: 67 PPAEEVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKCSCPP 126
E K C CK + LLC+TC SYH +C+ P+ E+P W CP+C P
Sbjct: 319 VEEEPAKANMDYCRICKETSN-ILLCDTCPSSYHAYCIDPPLT-EIPEGEWSCPRCIIPE 376
Query: 127 LPGKLEDMAS 136
++E + S
Sbjct: 377 PAQRIEKILS 386
>WB|WBGene00002637 [details] [associations]
symbol:let-418 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0048557 "embryonic digestive tract
morphogenesis" evidence=IGI] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IDA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0008134 "transcription
factor binding" evidence=IPI] [GO:0016581 "NuRD complex"
evidence=ISS] [GO:0040027 "negative regulation of vulval
development" evidence=IMP] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0000122 GO:GO:0040035
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
GO:GO:0048557 HSSP:Q14839 EMBL:AF308445 EMBL:FO080294 PIR:T34239
RefSeq:NP_504523.1 UniGene:Cel.16862 ProteinModelPortal:G5EBZ4
SMR:G5EBZ4 IntAct:G5EBZ4 STRING:Q19815 EnsemblMetazoa:F26F12.7
GeneID:178970 KEGG:cel:CELE_F26F12.7 CTD:178970 WormBase:F26F12.7
OMA:VTQDATE NextBio:903342 Uniprot:G5EBZ4
Length = 1829
Score = 311 (114.5 bits), Expect = 3.4e-26, P = 3.4e-26
Identities = 53/126 (42%), Positives = 74/126 (58%)
Query: 8 QTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASP 67
+ E+ DYCE C+Q GE++LCDTCPRAYH C+D ++E PEG WSC C+ GP
Sbjct: 252 EAENNDYCEECKQDGELLLCDTCPRAYHTVCIDENMEEPPEGDWSCAHCIEHGPEVVKEE 311
Query: 68 PAEEVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSG-WKCPKCSCPP 126
PA K+ + C CK + LLC++C S+H +C+ P+ E+P W CP+C
Sbjct: 312 PA---KQNDEFCKICKET-ENLLLCDSCVCSFHAYCIDPPLT-EVPKEETWSCPRCETVK 366
Query: 127 LPGKLE 132
K+E
Sbjct: 367 PEHKIE 372
Score = 106 (42.4 bits), Expect = 0.00022, P = 0.00022
Identities = 20/52 (38%), Positives = 27/52 (51%)
Query: 71 EVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC 122
E E C +CK G+ LLC+TC +YH C+ + +E E P W C C
Sbjct: 251 EEAENNDYCEECKQDGE-LLLCDTCPRAYHTVCIDENME-EPPEGDWSCAHC 300
>UNIPROTKB|G5EBZ4 [details] [associations]
symbol:let-418 "Protein let-418" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0000122 GO:GO:0040035
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
GO:GO:0048557 HSSP:Q14839 EMBL:AF308445 EMBL:FO080294 PIR:T34239
RefSeq:NP_504523.1 UniGene:Cel.16862 ProteinModelPortal:G5EBZ4
SMR:G5EBZ4 IntAct:G5EBZ4 STRING:Q19815 EnsemblMetazoa:F26F12.7
GeneID:178970 KEGG:cel:CELE_F26F12.7 CTD:178970 WormBase:F26F12.7
OMA:VTQDATE NextBio:903342 Uniprot:G5EBZ4
Length = 1829
Score = 311 (114.5 bits), Expect = 3.4e-26, P = 3.4e-26
Identities = 53/126 (42%), Positives = 74/126 (58%)
Query: 8 QTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASP 67
+ E+ DYCE C+Q GE++LCDTCPRAYH C+D ++E PEG WSC C+ GP
Sbjct: 252 EAENNDYCEECKQDGELLLCDTCPRAYHTVCIDENMEEPPEGDWSCAHCIEHGPEVVKEE 311
Query: 68 PAEEVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSG-WKCPKCSCPP 126
PA K+ + C CK + LLC++C S+H +C+ P+ E+P W CP+C
Sbjct: 312 PA---KQNDEFCKICKET-ENLLLCDSCVCSFHAYCIDPPLT-EVPKEETWSCPRCETVK 366
Query: 127 LPGKLE 132
K+E
Sbjct: 367 PEHKIE 372
Score = 106 (42.4 bits), Expect = 0.00022, P = 0.00022
Identities = 20/52 (38%), Positives = 27/52 (51%)
Query: 71 EVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC 122
E E C +CK G+ LLC+TC +YH C+ + +E E P W C C
Sbjct: 251 EEAENNDYCEECKQDGE-LLLCDTCPRAYHTVCIDENME-EPPEGDWSCAHC 300
>ZFIN|ZDB-GENE-030131-4532 [details] [associations]
symbol:chd4b "chromodomain helicase DNA binding
protein 4b" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-030131-4532
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:BX511250
IPI:IPI00931161 RefSeq:XP_685699.4 UniGene:Dr.75373
Ensembl:ENSDART00000092902 Ensembl:ENSDART00000148389 GeneID:560622
KEGG:dre:560622 CTD:560622 NextBio:20883532 Uniprot:F1RBT2
Length = 1953
Score = 294 (108.6 bits), Expect = 2.4e-24, P = 2.4e-24
Identities = 59/141 (41%), Positives = 76/141 (53%)
Query: 8 QTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDG----PPE 63
+T+HQDYCEVCQQGGEIILCDTCPRAYH+ CLDP+++ PEG WSCP C +G E
Sbjct: 371 ETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMERAPEGTWSCPHCEKEGIQWEARE 430
Query: 64 TASPPAEEVKEKEVLCAKCKSPGDQFL-LCETCNGSYHPHCL---P--------DPIEGE 111
+S EE + + D + C C C P +P +
Sbjct: 431 ESSEGEEENDDGRRDDGDVEEEDDHHMEFCRVCKDGGELLCCDTCPSSYHLHCLNPPLPD 490
Query: 112 LPTSGWKCPKCSCPPLPGKLE 132
+P W CP+C PPL GK++
Sbjct: 491 IPNGEWICPRCLSPPLKGKVQ 511
Score = 196 (74.1 bits), Expect = 6.3e-14, P = 6.3e-14
Identities = 29/59 (49%), Positives = 42/59 (71%)
Query: 4 IQDLQTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPP 62
+++ H ++C VC+ GGE++ CDTCP +YHL CL+P L + P G+W CPRC+S PP
Sbjct: 449 VEEEDDHHMEFCRVCKDGGELLCCDTCPSSYHLHCLNPPLPDIPNGEWICPRCLS--PP 505
>ZFIN|ZDB-GENE-121031-4 [details] [associations]
symbol:chd3 "chromodomain helicase DNA binding
protein 3" species:7955 "Danio rerio" [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR001965
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00628 Pfam:PF08073
PROSITE:PS50016 SMART:SM00184 SMART:SM00249 ZFIN:ZDB-GENE-121031-4
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0016818 EMBL:BC127572
EMBL:BC127574 IPI:IPI00488488 UniGene:Dr.66871 eggNOG:NOG299768
InParanoid:A0PJQ7 OMA:DSTHEET Uniprot:A0PJQ7
Length = 430
Score = 261 (96.9 bits), Expect = 3.7e-22, P = 3.7e-22
Identities = 41/49 (83%), Positives = 46/49 (93%)
Query: 8 QTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
+T+HQDYCEVCQQGGEIILCDTCPRAYHL CL+PEL++ PEGKWSCP C
Sbjct: 379 ETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLEPELEKAPEGKWSCPHC 427
>UNIPROTKB|C9JL37 [details] [associations]
symbol:AIRE "Autoimmune regulator" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:AP001060 HGNC:HGNC:360
HOGENOM:HOG000060093 IPI:IPI00480202 ProteinModelPortal:C9JL37
SMR:C9JL37 STRING:C9JL37 Ensembl:ENST00000355347
ArrayExpress:C9JL37 Bgee:C9JL37 Uniprot:C9JL37
Length = 338
Score = 182 (69.1 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 32/67 (47%), Positives = 41/67 (61%)
Query: 10 EHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASPPA 69
+++D C VC+ GGE+I CD CPRA+HL CL P L E P G W C C+ E P A
Sbjct: 87 KNEDECAVCRDGGELICCDGCPRAFHLACLSPPLREIPSGTWRCSSCLQATVQEV-QPRA 145
Query: 70 EEVKEKE 76
EE + +E
Sbjct: 146 EEPRPQE 152
Score = 65 (27.9 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 16/54 (29%), Positives = 21/54 (38%)
Query: 79 CAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKCSCPPLPGKLE 132
C C G L C C ++H C P P +G +C CS P +E
Sbjct: 227 CGVC-GDGTDVLRCTHCAAAFHWRC-HFPAGTSRPGTGLRCRSCSGDVTPAPVE 278
>UNIPROTKB|O43918 [details] [associations]
symbol:AIRE "Autoimmune regulator" species:9606 "Homo
sapiens" [GO:0045182 "translation regulator activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006959 "humoral immune response" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0042393 "histone binding" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=IDA] [GO:0006955 "immune
response" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0015629 "actin cytoskeleton" evidence=IDA] InterPro:IPR000770
InterPro:IPR001965 InterPro:IPR004865 InterPro:IPR008087
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01342 Pfam:PF03172
PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414
SMART:SM00249 SMART:SM00258 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 GO:GO:0045893 GO:GO:0006955 GO:GO:0006417
GO:GO:0046872 GO:GO:0015629 GO:GO:0008270 GO:GO:0045944
EMBL:CH471079 GO:GO:0006351 GO:GO:0003682 GO:GO:0045182
GO:GO:0044212 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 EMBL:AB006682 EMBL:AB006683 EMBL:AB006684
EMBL:AB006685 EMBL:Z97990 EMBL:AJ009610 EMBL:AP001754 EMBL:AP001060
EMBL:BC137268 EMBL:BC137270 IPI:IPI00015149 IPI:IPI00031178
IPI:IPI00031188 RefSeq:NP_000374.1 UniGene:Hs.129829 PDB:1XWH
PDB:2KE1 PDB:2KFT PDB:2LRI PDBsum:1XWH PDBsum:2KE1 PDBsum:2KFT
PDBsum:2LRI ProteinModelPortal:O43918 SMR:O43918 DIP:DIP-47504N
IntAct:O43918 MINT:MINT-6542056 STRING:O43918 PhosphoSite:O43918
PRIDE:O43918 Ensembl:ENST00000291582 Ensembl:ENST00000337909
Ensembl:ENST00000397994 Ensembl:ENST00000468282 GeneID:326
KEGG:hsa:326 UCSC:uc002zei.2 CTD:326 GeneCards:GC21P045705
HGNC:HGNC:360 HPA:HPA038267 MIM:109100 MIM:240300 MIM:607358
neXtProt:NX_O43918 Orphanet:3453 PharmGKB:PA24654 eggNOG:NOG317492
HOGENOM:HOG000060093 HOVERGEN:HBG014961 InParanoid:O43918 KO:K10603
OMA:NDDECAV OrthoDB:EOG4VX25M PhylomeDB:O43918
EvolutionaryTrace:O43918 GenomeRNAi:326 NextBio:1337
ArrayExpress:O43918 Bgee:O43918 CleanEx:HS_AIRE
Genevestigator:O43918 GermOnline:ENSG00000160224 GO:GO:0042393
GO:GO:0006959 Gene3D:3.10.390.10 InterPro:IPR010919 SUPFAM:SSF63763
Uniprot:O43918
Length = 545
Score = 185 (70.2 bits), Expect = 5.3e-18, Sum P(2) = 5.3e-18
Identities = 33/70 (47%), Positives = 42/70 (60%)
Query: 7 LQTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETAS 66
L +++D C VC+ GGE+I CD CPRA+HL CL P L E P G W C C+ E
Sbjct: 291 LHQKNEDECAVCRDGGELICCDGCPRAFHLACLSPPLREIPSGTWRCSSCLQATVQEV-Q 349
Query: 67 PPAEEVKEKE 76
P AEE + +E
Sbjct: 350 PRAEEPRPQE 359
Score = 104 (41.7 bits), Expect = 0.00034, P = 0.00034
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 61 PPETASPPAEEVKEK-EVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKC 119
P A P ++ +K E CA C+ G + + C+ C ++H CL P+ E+P+ W+C
Sbjct: 280 PAPLALPSDPQLHQKNEDECAVCRD-GGELICCDGCPRAFHLACLSPPLR-EIPSGTWRC 337
Query: 120 PKC 122
C
Sbjct: 338 SSC 340
Score = 65 (27.9 bits), Expect = 5.3e-18, Sum P(2) = 5.3e-18
Identities = 16/54 (29%), Positives = 21/54 (38%)
Query: 79 CAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKCSCPPLPGKLE 132
C C G L C C ++H C P P +G +C CS P +E
Sbjct: 434 CGVC-GDGTDVLRCTHCAAAFHWRC-HFPAGTSRPGTGLRCRSCSGDVTPAPVE 485
>RGD|1311139 [details] [associations]
symbol:Aire "autoimmune regulator" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0003682 "chromatin binding" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005622 "intracellular"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0005886 "plasma membrane"
evidence=IEA;ISO] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0006959 "humoral immune response"
evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA;ISO] [GO:0015629 "actin
cytoskeleton" evidence=IEA;ISO] [GO:0042393 "histone binding"
evidence=IEA;ISO] [GO:0042802 "identical protein binding"
evidence=IEA;ISO] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA;ISO] [GO:0045182 "translation regulator
activity" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000770 InterPro:IPR001965 InterPro:IPR004865
InterPro:IPR008087 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01342
Pfam:PF03172 PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS50864
PROSITE:PS51414 SMART:SM00249 SMART:SM00258 RGD:1311139
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 GO:GO:0006417
GO:GO:0046872 GO:GO:0015629 GO:GO:0008270 GO:GO:0045944
GO:GO:0003682 GO:GO:0045182 GO:GO:0044212 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 OMA:NDDECAV OrthoDB:EOG4VX25M
GO:GO:0006959 Gene3D:3.10.390.10 InterPro:IPR010919 SUPFAM:SSF63763
GeneTree:ENSGT00440000034278 IPI:IPI00360526
Ensembl:ENSRNOT00000001611 UCSC:RGD:1311139 Uniprot:D3ZV49
Length = 551
Score = 175 (66.7 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 29/61 (47%), Positives = 36/61 (59%)
Query: 10 EHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASPPA 69
+++D C VC GGE+I CD CPRA+HL CL P L E P G W C C+ + S P
Sbjct: 296 KNEDECAVCHDGGELICCDGCPRAFHLACLSPPLQEIPSGLWRCSCCLQGRIQQNLSQPE 355
Query: 70 E 70
E
Sbjct: 356 E 356
Score = 103 (41.3 bits), Expect = 0.00055, P = 0.00055
Identities = 23/76 (30%), Positives = 37/76 (48%)
Query: 61 PPETASPPAEEVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCP 120
PP P + E E CA C G + + C+ C ++H CL P++ E+P+ W+C
Sbjct: 285 PPLPNEPQVHQKNEDE--CAVCHD-GGELICCDGCPRAFHLACLSPPLQ-EIPSGLWRCS 340
Query: 121 KCSCPPLPGKLEDMAS 136
C L G+++ S
Sbjct: 341 CC----LQGRIQQNLS 352
Score = 71 (30.1 bits), Expect = 1.6e-17, Sum P(2) = 1.6e-17
Identities = 17/53 (32%), Positives = 23/53 (43%)
Query: 78 LCAKCKSPGDQ--FLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKCSCPPLP 128
L A+C GD L C C ++H C P+ P + +C CS P P
Sbjct: 430 LSARCGVCGDSTDVLRCAHCAAAFHWRC-HFPMAAVRPGTNLRCKSCSAEPTP 481
>MGI|MGI:1338803 [details] [associations]
symbol:Aire "autoimmune regulator (autoimmune
polyendocrinopathy candidiasis ectodermal dystrophy)" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0005622 "intracellular"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0006959 "humoral
immune response" evidence=IMP] [GO:0008270 "zinc ion binding"
evidence=ISO] [GO:0042393 "histone binding" evidence=ISO]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISO]
[GO:0045182 "translation regulator activity" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IMP;IDA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000770 InterPro:IPR001965 InterPro:IPR004865
InterPro:IPR008087 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01342
Pfam:PF03172 PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS50864
PROSITE:PS51414 SMART:SM00184 SMART:SM00249 SMART:SM00258
MGI:MGI:1338803 GO:GO:0005886 GO:GO:0005634 GO:GO:0005737
GO:GO:0006417 GO:GO:0046872 GO:GO:0015629 GO:GO:0008270
GO:GO:0045944 GO:GO:0006351 GO:GO:0003682 GO:GO:0045182
GO:GO:0044212 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 CTD:326 eggNOG:NOG317492 HOVERGEN:HBG014961
KO:K10603 OMA:NDDECAV GO:GO:0042393 GO:GO:0006959
Gene3D:3.10.390.10 InterPro:IPR010919 SUPFAM:SSF63763 EMBL:AF105002
EMBL:AF128772 EMBL:AF128773 EMBL:AJ007715 EMBL:AF079536
EMBL:AJ132243 EMBL:AF128115 EMBL:AF128116 EMBL:AF128117
EMBL:AF128118 EMBL:AF128119 EMBL:AF128120 EMBL:AF128121
EMBL:AF128122 EMBL:AF128123 EMBL:AF128124 EMBL:AF128125
EMBL:AJ243821 IPI:IPI00129025 IPI:IPI00223523 IPI:IPI00223524
IPI:IPI00223525 IPI:IPI00230215 IPI:IPI00230216 IPI:IPI00230217
IPI:IPI00230218 IPI:IPI00230219 IPI:IPI00230220 IPI:IPI00230221
IPI:IPI00400171 RefSeq:NP_001258478.1 RefSeq:NP_001258479.1
RefSeq:NP_001258480.1 RefSeq:NP_001258481.1 RefSeq:NP_001258482.1
RefSeq:NP_001258483.1 RefSeq:NP_001258484.1 RefSeq:NP_001258485.1
RefSeq:NP_001258486.1 RefSeq:NP_001258487.1 RefSeq:NP_001258488.1
RefSeq:NP_033776.1 UniGene:Mm.35300 ProteinModelPortal:Q9Z0E3
SMR:Q9Z0E3 DIP:DIP-31030N IntAct:Q9Z0E3 STRING:Q9Z0E3
PhosphoSite:Q9Z0E3 PRIDE:Q9Z0E3 Ensembl:ENSMUST00000019257
Ensembl:ENSMUST00000105395 Ensembl:ENSMUST00000105396
Ensembl:ENSMUST00000128241 Ensembl:ENSMUST00000130972
Ensembl:ENSMUST00000140636 Ensembl:ENSMUST00000145975
Ensembl:ENSMUST00000148469 Ensembl:ENSMUST00000154374
Ensembl:ENSMUST00000155021 Ensembl:ENSMUST00000156417 GeneID:11634
KEGG:mmu:11634 UCSC:uc007fws.1 UCSC:uc007fwt.1 UCSC:uc007fwu.1
UCSC:uc007fwv.1 UCSC:uc007fww.1 UCSC:uc007fwx.1 UCSC:uc007fwz.1
UCSC:uc007fxa.1 UCSC:uc007fxb.1 GeneTree:ENSGT00440000034278
InParanoid:Q9Z0E3 ChiTaRS:AIRE NextBio:279201 Bgee:Q9Z0E3
Genevestigator:Q9Z0E3 GermOnline:ENSMUSG00000000731 Uniprot:Q9Z0E3
Length = 552
Score = 172 (65.6 bits), Expect = 8.6e-17, Sum P(2) = 8.6e-17
Identities = 28/59 (47%), Positives = 35/59 (59%)
Query: 10 EHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASPP 68
+++D C VC GGE+I CD CPRA+HL CL P L E P G W C C+ + S P
Sbjct: 296 KNEDECAVCHDGGELICCDGCPRAFHLACLSPPLQEIPSGLWRCSCCLQGRVQQNLSQP 354
Score = 106 (42.4 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 21/63 (33%), Positives = 34/63 (53%)
Query: 61 PPETASPPAEEVKEK-EVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKC 119
PP + P +V +K E CA C G + + C+ C ++H CL P++ E+P+ W+C
Sbjct: 282 PPLPSLPSEPQVNQKNEDECAVCHD-GGELICCDGCPRAFHLACLSPPLQ-EIPSGLWRC 339
Query: 120 PKC 122
C
Sbjct: 340 SCC 342
Score = 67 (28.6 bits), Expect = 8.6e-17, Sum P(2) = 8.6e-17
Identities = 16/53 (30%), Positives = 22/53 (41%)
Query: 79 CAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKCSCP--PLPG 129
C+ C G + L C C ++H C P P + +C CS P PG
Sbjct: 434 CSVC-GDGTEVLRCAHCAAAFHWRC-HFPTAAARPGTNLRCKSCSADSTPTPG 484
>UNIPROTKB|E1BIC4 [details] [associations]
symbol:AIRE "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006959 "humoral
immune response" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0045182 "translation regulator activity"
evidence=IEA] InterPro:IPR000770 InterPro:IPR001965
InterPro:IPR004865 InterPro:IPR008087 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01342 Pfam:PF03172 PRINTS:PR01711
PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414 SMART:SM00249
SMART:SM00258 GO:GO:0005886 GO:GO:0005634 GO:GO:0005737
GO:GO:0006417 GO:GO:0046872 GO:GO:0015629 GO:GO:0008270
GO:GO:0045944 GO:GO:0003682 GO:GO:0045182 GO:GO:0044212
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 OMA:NDDECAV
GO:GO:0006959 Gene3D:3.10.390.10 InterPro:IPR010919 SUPFAM:SSF63763
GeneTree:ENSGT00440000034278 EMBL:DAAA02003438 EMBL:DAAA02003439
IPI:IPI00693894 Ensembl:ENSBTAT00000031852 Uniprot:E1BIC4
Length = 561
Score = 185 (70.2 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 30/71 (42%), Positives = 42/71 (59%)
Query: 7 LQTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETAS 66
L +++D C C+ GGE++ CD CPRA+HL CL P L E P G W C CV +
Sbjct: 299 LHQKNEDECAACRDGGELLCCDGCPRAFHLACLTPPLSEIPSGTWRCSNCVQGTTAQRDL 358
Query: 67 PPAEEVKEKEV 77
P AE+ + +E+
Sbjct: 359 PRAEQPRPQEL 369
Score = 117 (46.2 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 23/69 (33%), Positives = 35/69 (50%)
Query: 54 PRCVSDGPPETASPPAEEVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELP 113
PR + PP S P K ++ CA C+ G + L C+ C ++H CL P+ E+P
Sbjct: 283 PRDRAPAPPALPSEPQLHQKNEDE-CAACRD-GGELLCCDGCPRAFHLACLTPPLS-EIP 339
Query: 114 TSGWKCPKC 122
+ W+C C
Sbjct: 340 SGTWRCSNC 348
Score = 53 (23.7 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
Identities = 16/53 (30%), Positives = 20/53 (37%)
Query: 79 CAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKCS--CPPLPG 129
C C D L C C ++H C P P + +C CS P PG
Sbjct: 442 CGVCGDGADA-LRCAHCAAAFHWRC-HFPGCATRPGAALRCRACSGDTAPAPG 492
>DICTYBASE|DDB_G0277341 [details] [associations]
symbol:DDB_G0277341 "PHD zinc finger-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 dictyBase:DDB_G0277341 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 EMBL:AAFI02000019 eggNOG:NOG145066
RefSeq:XP_642746.2 ProteinModelPortal:Q86K47 SMR:Q86K47
EnsemblProtists:DDB0219998 GeneID:8620936 KEGG:ddi:DDB_G0277341
InParanoid:Q86K47 OMA:ASMPSEF Uniprot:Q86K47
Length = 914
Score = 157 (60.3 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 25/64 (39%), Positives = 36/64 (56%)
Query: 11 HQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCV---SDGPPETASP 67
+ DYC C GG+++ CD C ++HL CL+P L+E P G W C C +T P
Sbjct: 60 NDDYCSGCGDGGDLLCCDNCQASFHLICLNPPLNEIPSGDWFCDSCTYKKQQQQQKTKQP 119
Query: 68 PAEE 71
PA++
Sbjct: 120 PAQQ 123
Score = 87 (35.7 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 22/77 (28%), Positives = 33/77 (42%)
Query: 71 EVKEKEVLCAKCKSPGDQ--FLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKCSCPPLP 128
+ K+ C CK +Q + C CN +H CL P+ + P S W CPK + P
Sbjct: 189 KTSSKKKGCQSCKDSSNQTDIVQCNRCNSCFHTFCLEPPLIYK-P-SYWICPKHNDYTSP 246
Query: 129 GKLEDMASLLRLPRQHR 145
+ + R QH+
Sbjct: 247 SAYSSIRNTRRPGEQHQ 263
>POMBASE|SPAC2F7.07c [details] [associations]
symbol:cph2 "Clr6 histone deacetylase associated PHD
protein-2 Cph2" species:4896 "Schizosaccharomyces pombe"
[GO:0005634 "nucleus" evidence=IDA] [GO:0005819 "spindle"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016575 "histone
deacetylation" evidence=ISO] [GO:0019787 "small conjugating protein
ligase activity" evidence=ISM] [GO:0032221 "Rpd3S complex"
evidence=IDA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 PomBase:SPAC2F7.07c EMBL:CU329670
GO:GO:0005819 GO:GO:0046872 GO:GO:0008270 GO:GO:0006338
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0019787
GO:GO:0016575 GO:GO:0032221 eggNOG:NOG145066 OrthoDB:EOG4TQQJV
PIR:T38555 RefSeq:NP_592978.1 ProteinModelPortal:Q09698
DIP:DIP-29347N STRING:Q09698 EnsemblFungi:SPAC2F7.07c.1
GeneID:2541422 KEGG:spo:SPAC2F7.07c NextBio:20802526 Uniprot:Q09698
Length = 607
Score = 130 (50.8 bits), Expect = 2.5e-16, Sum P(2) = 2.5e-16
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 11 HQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDET--PEGKWSCPRC 56
+ DYC C G + C+TCP ++H C+DP ++E P+ W C C
Sbjct: 262 NNDYCSACHGPGNFLCCETCPNSFHFTCIDPPIEEKNLPDDAWYCNEC 309
Score = 124 (48.7 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 24/60 (40%), Positives = 33/60 (55%)
Query: 79 CAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGE-LPTSGWKCPKCSCPPLPGKLEDMASL 137
C+ C PG+ FL CETC S+H C+ PIE + LP W C +C L +L++ L
Sbjct: 266 CSACHGPGN-FLCCETCPNSFHFTCIDPPIEEKNLPDDAWYCNECKHHSLYNELDEQEEL 324
Score = 107 (42.7 bits), Expect = 2.5e-16, Sum P(2) = 2.5e-16
Identities = 28/74 (37%), Positives = 39/74 (52%)
Query: 77 VLCAKC-KSP--GDQFLLCETCNGSYHPHCLPDPIEGELPTS--GWKCPKCSCPPLPG-K 130
+LC +C KS L C+ CN +HP CL P+ LP++ WKCP S P +
Sbjct: 407 ILCFRCHKSALVSQSILACDYCNSYWHPDCLNPPL-ATLPSNLRKWKCPNHSDHVTPRYR 465
Query: 131 LEDMASLLR--LPR 142
L + A ++R LPR
Sbjct: 466 LPEKAKVIRVGLPR 479
>ZFIN|ZDB-GENE-030131-5379 [details] [associations]
symbol:kdm5ba "lysine (K)-specific demethylase
5Ba" species:7955 "Danio rerio" [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 ZFIN:ZDB-GENE-030131-5379 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 EMBL:CR628365 IPI:IPI00636517
Ensembl:ENSDART00000058729 ArrayExpress:F1R3Y4 Bgee:F1R3Y4
Uniprot:F1R3Y4
Length = 1483
Score = 141 (54.7 bits), Expect = 9.7e-16, Sum P(3) = 9.7e-16
Identities = 28/65 (43%), Positives = 38/65 (58%)
Query: 6 DLQTEHQDYCEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSD--G 60
D Q E Q C VC GG+ ++LCD C +YH CL P L + P+G W CP+C++ G
Sbjct: 272 DPQVE-QYICLVCGGGGDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKCLAQECG 330
Query: 61 PPETA 65
P+ A
Sbjct: 331 KPQVA 335
Score = 124 (48.7 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 27/88 (30%), Positives = 43/88 (48%)
Query: 59 DGPPETASPPAEEVKEKEVLCAKCKSPGDQ--FLLCETCNGSYHPHCLPDPIEGELPTSG 116
DG A+ + + ++ +C C GD+ LLC+ C+ SYH CL P+ ++P
Sbjct: 260 DGEKSKATFGFLDPQVEQYICLVCGGGGDEDRLLLCDGCDDSYHTFCLIPPLH-DVPKGD 318
Query: 117 WKCPKCSCPPLPGKLEDMASLLRLPRQH 144
W+CPKC GK + + PR +
Sbjct: 319 WRCPKCLAQEC-GKPQVAFGFEQAPRDY 345
Score = 86 (35.3 bits), Expect = 9.7e-16, Sum P(3) = 9.7e-16
Identities = 21/59 (35%), Positives = 28/59 (47%)
Query: 85 PGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKCSC---PPLPGKLEDMASLLRL 140
P L CE C +YH C+P + ++ W CP C PPL L +ASL R+
Sbjct: 1151 PAGPMLQCELCRDAYHSGCVPGFKDIQIGQP-WLCPLCKRSEKPPLDKVLPLLASLQRI 1208
Score = 36 (17.7 bits), Expect = 9.7e-16, Sum P(3) = 9.7e-16
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 76 EVLCAKCKSPGDQ 88
EVLC +C++ G Q
Sbjct: 1056 EVLCPRCET-GSQ 1067
Score = 36 (17.7 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 16/52 (30%), Positives = 23/52 (44%)
Query: 74 EKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKCSCP 125
++E CAKC++ +L TC P C P+ + T CSCP
Sbjct: 655 DEERQCAKCRTTC--YLSAITC-----P-CSPEQVVCLHHTQDL----CSCP 694
>UNIPROTKB|F1MS13 [details] [associations]
symbol:PHF21A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0001967
"suckling behavior" evidence=IEA] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR017956 InterPro:IPR019787 Pfam:PF00628 Pfam:PF02178
PROSITE:PS50016 SMART:SM00184 SMART:SM00249 SMART:SM00384
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0001967
GO:GO:0003682 GO:GO:0000122 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0000118 OMA:SCTVNCN
GeneTree:ENSGT00530000063984 EMBL:DAAA02041566 EMBL:DAAA02041567
IPI:IPI00716921 Ensembl:ENSBTAT00000012652 Uniprot:F1MS13
Length = 631
Score = 184 (69.8 bits), Expect = 7.2e-15, Sum P(2) = 7.2e-15
Identities = 26/46 (56%), Positives = 35/46 (76%)
Query: 11 HQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
H+D+C VC++ G++++CDTC R YHL CLDP L P+G W CPRC
Sbjct: 435 HEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRC 480
Score = 128 (50.1 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 32/97 (32%), Positives = 48/97 (49%)
Query: 26 LCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASPPAEEVKEKEVLCAKCKSP 85
L T P + H PE ++T E ++ P V P SP + + E C+ C+
Sbjct: 391 LTPTSPPSSHPD--SPENEKT-ETTFTFPASVQ--PVSLPSPTSTDGDIHEDFCSVCRKS 445
Query: 86 GDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC 122
G Q L+C+TC+ YH CL P++ +P W CP+C
Sbjct: 446 G-QLLMCDTCSRVYHLDCLDPPLK-TIPKGMWICPRC 480
Score = 38 (18.4 bits), Expect = 7.2e-15, Sum P(2) = 7.2e-15
Identities = 9/36 (25%), Positives = 16/36 (44%)
Query: 54 PRCVSDGPPETASP-PAEEVKEKEVLCAKCKSPGDQ 88
P C T++P P+ + A C +PG++
Sbjct: 595 PDCTPPANASTSTPAPSPPSSSSQSCTANC-NPGEE 629
>UNIPROTKB|D4AC30 [details] [associations]
symbol:D4AC30 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 IPI:IPI00781625
Ensembl:ENSRNOT00000035130 ArrayExpress:D4AC30 Uniprot:D4AC30
Length = 786
Score = 146 (56.5 bits), Expect = 2.2e-14, Sum P(3) = 2.2e-14
Identities = 24/50 (48%), Positives = 33/50 (66%)
Query: 9 TEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDET--PEGKWSCPRC 56
T H D C+ C++GG+++ CD CP A+HL C +P L E P G+W C RC
Sbjct: 54 TNH-DSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRC 102
Score = 102 (41.0 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 17/46 (36%), Positives = 24/46 (52%)
Query: 9 TEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCP 54
T H + + +I CD CP +H+ CL+P L P G+W CP
Sbjct: 270 THHISFLRRSCRVAPLIQCDYCPLLFHMDCLEPPLTAMPLGRWMCP 315
Score = 63 (27.2 bits), Expect = 3.8e-13, Sum P(2) = 3.8e-13
Identities = 22/85 (25%), Positives = 33/85 (38%)
Query: 52 SCPRCVSDGPPETASPPAEEVKEKEVLCAKCKSPGDQFLLCETCNGSYH-------PHCL 104
SCP +S SPP + +++ C+ C + C T NG + PH
Sbjct: 494 SCPSAMSTQNSLGCSPPHQPPTLEDISCSSCVEKSKK-APCGTANGPVNTEVKANGPHLY 552
Query: 105 PDPIEGELPTSGWKCPKCSCPPLPG 129
P + P + P + P LPG
Sbjct: 553 SSPTDSSDPR---RLPGANTP-LPG 573
Score = 60 (26.2 bits), Expect = 2.2e-14, Sum P(3) = 2.2e-14
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 92 CETCNGSYHPHCLPDPIEGELPTSGWKCP 120
C+ C +H CL P+ +P W CP
Sbjct: 288 CDYCPLLFHMDCLEPPLTA-MPLGRWMCP 315
Score = 37 (18.1 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 9/32 (28%), Positives = 14/32 (43%)
Query: 97 GSYHPHCLPDPIEGELPTSGWKCPKCSCPPLP 128
G H + ++ E T CP+ S P+P
Sbjct: 590 GGLQNHAVGIIVKTENATGPSSCPQRSLVPVP 621
Score = 34 (17.0 bits), Expect = 2.2e-14, Sum P(3) = 2.2e-14
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 122 CSCPPLPGKLEDMA 135
CS P P LED++
Sbjct: 507 CSPPHQPPTLEDIS 520
>UNIPROTKB|F1S4N3 [details] [associations]
symbol:KDM5B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0034648 "histone demethylase
activity (H3-dimethyl-K4 specific)" evidence=IEA] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 GO:GO:0034647 OMA:CENEKEM
EMBL:CU986276 Ensembl:ENSSSCT00000011960 Uniprot:F1S4N3
Length = 1304
Score = 122 (48.0 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 15 CEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVS 58
C +C G + ++LCD C +YH CL P L + P+G W CP+C++
Sbjct: 311 CLLCGSGSDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKCLA 357
Score = 116 (45.9 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 78 LCAKCKSPGDQ--FLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC 122
+C C S D+ LLC+ C+ SYH CL P+ ++P W+CPKC
Sbjct: 310 VCLLCGSGSDEDRLLLCDGCDDSYHTFCLIPPLH-DVPKGDWRCPKC 355
Score = 104 (41.7 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 26/76 (34%), Positives = 36/76 (47%)
Query: 68 PAEEVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC---SC 124
P ++V K LC K +P + CE C ++H C+ P + P W CP C
Sbjct: 1169 PVQDVDMKVCLCQK--APAAPMIQCELCRDAFHTSCVAVPSISQGPRI-WLCPHCRRSEK 1225
Query: 125 PPLPGKLEDMASLLRL 140
PPL L +ASL R+
Sbjct: 1226 PPLEKILPLLASLQRI 1241
Score = 41 (19.5 bits), Expect = 7.7e-08, Sum P(2) = 7.7e-08
Identities = 19/62 (30%), Positives = 25/62 (40%)
Query: 70 EEVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKCSCPPLPG 129
E + + E C KCK+ F+ +C+ C P G L CSCPP
Sbjct: 682 ELLPDDERQCVKCKTTC--FMSAISCS------CKP----GLLVCLHHVKELCSCPPYKY 729
Query: 130 KL 131
KL
Sbjct: 730 KL 731
Score = 41 (19.5 bits), Expect = 8.1e-05, Sum P(2) = 8.1e-05
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 19 QQGGEIILCDTCPRAYH 35
Q GE ++ T PRAYH
Sbjct: 572 QCAGEFVI--TFPRAYH 586
>UNIPROTKB|F1PFZ4 [details] [associations]
symbol:BPTF "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
GeneTree:ENSGT00660000095339 EMBL:AAEX03006365 EMBL:AAEX03006366
Ensembl:ENSCAFT00000018361 Uniprot:F1PFZ4
Length = 2716
Score = 157 (60.3 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 10 EHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASPPA 69
++ D+C VC + G+++ C+TC YHL C+ P L+E PE +W C CV+ P A
Sbjct: 188 QYDDHCRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVCVAHKVPGVTDCVA 247
Query: 70 EEVKEK 75
E K K
Sbjct: 248 EIQKNK 253
Score = 119 (46.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 24/69 (34%), Positives = 36/69 (52%)
Query: 69 AEEVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKCSCPPLP 128
+E V + + C C GD L CETC+ YH C+ P+E E+P W+C C +P
Sbjct: 183 SEGVIQYDDHCRVCHKLGD-LLCCETCSAVYHLECVKPPLE-EVPEDEWQCEVCVAHKVP 240
Query: 129 GKLEDMASL 137
G + +A +
Sbjct: 241 GVTDCVAEI 249
Score = 75 (31.5 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 19/61 (31%), Positives = 30/61 (49%)
Query: 66 SPPAEEVKEKEVLCAKCKSPGDQ---FLLCETCNGSYHPHCLPD-PIEGELPTSGWKCPK 121
S ++E K+ L CK+P D+ ++ C+ C YH C+ E EL + CP+
Sbjct: 2526 STTSKETKKDTKLYCICKTPYDESKFYIGCDRCQNWYHGRCVGILQSEAEL-IDEYVCPQ 2584
Query: 122 C 122
C
Sbjct: 2585 C 2585
>UNIPROTKB|E7ETD6 [details] [associations]
symbol:BPTF "Nucleosome-remodeling factor subunit BPTF"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00249 SMART:SM00297
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
EMBL:AC006534 EMBL:AC107377 EMBL:AC134407 HGNC:HGNC:3581
ChiTaRS:BPTF IPI:IPI00024532 ProteinModelPortal:E7ETD6
Ensembl:ENST00000424123 ArrayExpress:E7ETD6 Uniprot:E7ETD6
Length = 2764
Score = 157 (60.3 bits), Expect = 2.7e-14, Sum P(2) = 2.7e-14
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 10 EHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASPPA 69
++ D+C VC + G+++ C+TC YHL C+ P L+E PE +W C CV+ P A
Sbjct: 249 QYDDHCRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVCVAHKVPGVTDCVA 308
Query: 70 EEVKEK 75
E K K
Sbjct: 309 EIQKNK 314
Score = 119 (46.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 24/69 (34%), Positives = 36/69 (52%)
Query: 69 AEEVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKCSCPPLP 128
+E V + + C C GD L CETC+ YH C+ P+E E+P W+C C +P
Sbjct: 244 SEGVIQYDDHCRVCHKLGD-LLCCETCSAVYHLECVKPPLE-EVPEDEWQCEVCVAHKVP 301
Query: 129 GKLEDMASL 137
G + +A +
Sbjct: 302 GVTDCVAEI 310
Score = 75 (31.5 bits), Expect = 2.7e-14, Sum P(2) = 2.7e-14
Identities = 19/61 (31%), Positives = 30/61 (49%)
Query: 66 SPPAEEVKEKEVLCAKCKSPGDQ---FLLCETCNGSYHPHCLPD-PIEGELPTSGWKCPK 121
S ++E K+ L CK+P D+ ++ C+ C YH C+ E EL + CP+
Sbjct: 2574 STTSKETKKDTKLYCICKTPYDESKFYIGCDRCQNWYHGRCVGILQSEAEL-IDEYVCPQ 2632
Query: 122 C 122
C
Sbjct: 2633 C 2633
>UNIPROTKB|J9JHE8 [details] [associations]
symbol:BPTF "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
OMA:DVIMEDF GeneTree:ENSGT00660000095339 EMBL:AAEX03006365
EMBL:AAEX03006366 Ensembl:ENSCAFT00000047847 Uniprot:J9JHE8
Length = 2842
Score = 157 (60.3 bits), Expect = 2.9e-14, Sum P(2) = 2.9e-14
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 10 EHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASPPA 69
++ D+C VC + G+++ C+TC YHL C+ P L+E PE +W C CV+ P A
Sbjct: 188 QYDDHCRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVCVAHKVPGVTDCVA 247
Query: 70 EEVKEK 75
E K K
Sbjct: 248 EIQKNK 253
Score = 119 (46.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 24/69 (34%), Positives = 36/69 (52%)
Query: 69 AEEVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKCSCPPLP 128
+E V + + C C GD L CETC+ YH C+ P+E E+P W+C C +P
Sbjct: 183 SEGVIQYDDHCRVCHKLGD-LLCCETCSAVYHLECVKPPLE-EVPEDEWQCEVCVAHKVP 240
Query: 129 GKLEDMASL 137
G + +A +
Sbjct: 241 GVTDCVAEI 249
Score = 75 (31.5 bits), Expect = 2.9e-14, Sum P(2) = 2.9e-14
Identities = 19/61 (31%), Positives = 30/61 (49%)
Query: 66 SPPAEEVKEKEVLCAKCKSPGDQ---FLLCETCNGSYHPHCLPD-PIEGELPTSGWKCPK 121
S ++E K+ L CK+P D+ ++ C+ C YH C+ E EL + CP+
Sbjct: 2652 STTSKETKKDTKLYCICKTPYDESKFYIGCDRCQNWYHGRCVGILQSEAEL-IDEYVCPQ 2710
Query: 122 C 122
C
Sbjct: 2711 C 2711
>UNIPROTKB|F1N3U7 [details] [associations]
symbol:BPTF "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0007492 "endoderm development" evidence=IEA]
[GO:0007420 "brain development" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IEA] [GO:0001892 "embryonic placenta
development" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 SMART:SM00249
SMART:SM00297 GO:GO:0045893 GO:GO:0007420 GO:GO:0009952
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0006351
GO:GO:0006338 GO:GO:0000122 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0007492 GO:GO:0001892 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0016589
InterPro:IPR004022 InterPro:IPR018500 InterPro:IPR018501
Pfam:PF02791 SMART:SM00571 PROSITE:PS50827 OMA:DVIMEDF
GO:GO:0008094 GeneTree:ENSGT00660000095339 EMBL:DAAA02049354
IPI:IPI00698701 Ensembl:ENSBTAT00000019440 Uniprot:F1N3U7
Length = 2853
Score = 157 (60.3 bits), Expect = 2.9e-14, Sum P(2) = 2.9e-14
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 10 EHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASPPA 69
++ D+C VC + G+++ C+TC YHL C+ P L+E PE +W C CV+ P A
Sbjct: 190 QYDDHCRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVCVAHKVPGVTDCVA 249
Query: 70 EEVKEK 75
E K K
Sbjct: 250 EIQKNK 255
Score = 119 (46.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 24/69 (34%), Positives = 36/69 (52%)
Query: 69 AEEVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKCSCPPLP 128
+E V + + C C GD L CETC+ YH C+ P+E E+P W+C C +P
Sbjct: 185 SEGVIQYDDHCRVCHKLGD-LLCCETCSAVYHLECVKPPLE-EVPEDEWQCEVCVAHKVP 242
Query: 129 GKLEDMASL 137
G + +A +
Sbjct: 243 GVTDCVAEI 251
Score = 75 (31.5 bits), Expect = 2.9e-14, Sum P(2) = 2.9e-14
Identities = 19/61 (31%), Positives = 30/61 (49%)
Query: 66 SPPAEEVKEKEVLCAKCKSPGDQ---FLLCETCNGSYHPHCLPD-PIEGELPTSGWKCPK 121
S ++E K+ L CK+P D+ ++ C+ C YH C+ E EL + CP+
Sbjct: 2663 STTSKETKKDTKLYCICKTPYDESKFYIGCDRCQNWYHGRCVGILQSEAEL-IDEYVCPQ 2721
Query: 122 C 122
C
Sbjct: 2722 C 2722
Score = 42 (19.8 bits), Expect = 7.7e-11, Sum P(2) = 7.7e-11
Identities = 12/40 (30%), Positives = 15/40 (37%)
Query: 97 GSYHP--HCLPDPIEGELPTSGWKCPKCSCPPLPGKLEDM 134
G YH LP E E + P C ++EDM
Sbjct: 1425 GDYHDSLETLPSTKESESAQAAMPLPSCPEGSSSNQVEDM 1464
>UNIPROTKB|F1PJS3 [details] [associations]
symbol:KDM5B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
GeneTree:ENSGT00530000063118 OMA:CENEKEM EMBL:AAEX03004965
Ensembl:ENSCAFT00000016655 Uniprot:F1PJS3
Length = 1476
Score = 122 (48.0 bits), Expect = 3.1e-14, Sum P(2) = 3.1e-14
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 15 CEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVS 58
C +C G + ++LCD C +YH CL P L + P+G W CP+C++
Sbjct: 244 CLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKCLA 290
Score = 116 (45.9 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 78 LCAKCKSPGDQ--FLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC 122
+C C S D+ LLC+ C+ SYH CL P+ ++P W+CPKC
Sbjct: 243 VCLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLH-DVPKGDWRCPKC 288
Score = 104 (41.7 bits), Expect = 3.1e-14, Sum P(2) = 3.1e-14
Identities = 26/76 (34%), Positives = 37/76 (48%)
Query: 68 PAEEVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC---SC 124
P ++V+ K LC K +P + CE C ++H C+ P + P W CP C
Sbjct: 1102 PVQDVELKVCLCQK--APAAPMIQCELCRDAFHTSCVVVPSISQGPRI-WLCPHCRRSEK 1158
Query: 125 PPLPGKLEDMASLLRL 140
PPL L +ASL R+
Sbjct: 1159 PPLEKILPLLASLQRI 1174
Score = 41 (19.5 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 9/17 (52%), Positives = 11/17 (64%)
Query: 19 QQGGEIILCDTCPRAYH 35
Q GE ++ T PRAYH
Sbjct: 505 QCAGEFVI--TFPRAYH 519
Score = 40 (19.1 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 7/10 (70%), Positives = 7/10 (70%)
Query: 122 CSCPPLPGKL 131
CSCPP KL
Sbjct: 655 CSCPPYKYKL 664
>UNIPROTKB|Q12830 [details] [associations]
symbol:BPTF "Nucleosome-remodeling factor subunit BPTF"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0001892 "embryonic placenta development"
evidence=IEA] [GO:0007492 "endoderm development" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016589
"NURF complex" evidence=IDA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007420 "brain development" evidence=IMP] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0006351 "transcription, DNA-dependent" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IMP;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0005737
GO:GO:0045893 GO:GO:0007420 GO:GO:0009952 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0006351 GO:GO:0006338
GO:GO:0000122 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0008134 GO:GO:0007492 GO:GO:0001892
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076
InterPro:IPR018359 GO:GO:0016589 InterPro:IPR004022
InterPro:IPR018500 InterPro:IPR018501 Pfam:PF02791 SMART:SM00571
PROSITE:PS50827 EMBL:AB032251 EMBL:AC006534 EMBL:AC107377
EMBL:AC134407 EMBL:U05237 EMBL:AY282495 EMBL:BC067234
IPI:IPI00254408 IPI:IPI00376404 IPI:IPI00785110 PIR:G01252
RefSeq:NP_004450.3 RefSeq:NP_872579.2 UniGene:Hs.444200 PDB:2F6J
PDB:2F6N PDB:2FSA PDB:2FUI PDB:2FUU PDB:2RI7 PDB:3QZS PDB:3QZT
PDB:3QZV PDB:3UV2 PDBsum:2F6J PDBsum:2F6N PDBsum:2FSA PDBsum:2FUI
PDBsum:2FUU PDBsum:2RI7 PDBsum:3QZS PDBsum:3QZT PDBsum:3QZV
PDBsum:3UV2 ProteinModelPortal:Q12830 SMR:Q12830 IntAct:Q12830
STRING:Q12830 PhosphoSite:Q12830 DMDM:215274183 PaxDb:Q12830
PRIDE:Q12830 Ensembl:ENST00000306378 Ensembl:ENST00000321892
Ensembl:ENST00000335221 Ensembl:ENST00000571054
Ensembl:ENST00000573834 Ensembl:ENST00000576412 GeneID:2186
KEGG:hsa:2186 UCSC:uc002jge.3 UCSC:uc002jgf.3 CTD:2186
GeneCards:GC17P065821 HGNC:HGNC:3581 HPA:HPA029069 MIM:601819
neXtProt:NX_Q12830 PharmGKB:PA162377557 HOGENOM:HOG000231041
HOVERGEN:HBG080062 KO:K11728 OMA:DVIMEDF ChiTaRS:BPTF
EvolutionaryTrace:Q12830 GenomeRNAi:2186 NextBio:8831
ArrayExpress:Q12830 Bgee:Q12830 CleanEx:HS_BPTF
Genevestigator:Q12830 GermOnline:ENSG00000171634 Uniprot:Q12830
Length = 3046
Score = 157 (60.3 bits), Expect = 3.4e-14, Sum P(2) = 3.4e-14
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 10 EHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASPPA 69
++ D+C VC + G+++ C+TC YHL C+ P L+E PE +W C CV+ P A
Sbjct: 388 QYDDHCRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVCVAHKVPGVTDCVA 447
Query: 70 EEVKEK 75
E K K
Sbjct: 448 EIQKNK 453
Score = 119 (46.9 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 24/69 (34%), Positives = 36/69 (52%)
Query: 69 AEEVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKCSCPPLP 128
+E V + + C C GD L CETC+ YH C+ P+E E+P W+C C +P
Sbjct: 383 SEGVIQYDDHCRVCHKLGD-LLCCETCSAVYHLECVKPPLE-EVPEDEWQCEVCVAHKVP 440
Query: 129 GKLEDMASL 137
G + +A +
Sbjct: 441 GVTDCVAEI 449
Score = 75 (31.5 bits), Expect = 3.4e-14, Sum P(2) = 3.4e-14
Identities = 19/61 (31%), Positives = 30/61 (49%)
Query: 66 SPPAEEVKEKEVLCAKCKSPGDQ---FLLCETCNGSYHPHCLPD-PIEGELPTSGWKCPK 121
S ++E K+ L CK+P D+ ++ C+ C YH C+ E EL + CP+
Sbjct: 2856 STTSKETKKDTKLYCICKTPYDESKFYIGCDRCQNWYHGRCVGILQSEAEL-IDEYVCPQ 2914
Query: 122 C 122
C
Sbjct: 2915 C 2915
>FB|FBgn0029861 [details] [associations]
symbol:CG3815 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0070822 "Sin3-type complex" evidence=IDA]
InterPro:IPR000253 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50006 PROSITE:PS50016 SMART:SM00249
GO:GO:0046872 EMBL:AE014298 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0070822 HSSP:Q14839
eggNOG:NOG145066 GeneTree:ENSGT00440000033777 EMBL:AY069054
RefSeq:NP_572311.1 UniGene:Dm.2312 SMR:Q9W410 IntAct:Q9W410
MINT:MINT-921456 STRING:Q9W410 EnsemblMetazoa:FBtr0070899
GeneID:31571 KEGG:dme:Dmel_CG3815 UCSC:CG3815-RA
FlyBase:FBgn0029861 InParanoid:Q9W410 OMA:SEFGTEV OrthoDB:EOG45HQC9
GenomeRNAi:31571 NextBio:774240 Uniprot:Q9W410
Length = 878
Score = 156 (60.0 bits), Expect = 3.5e-14, Sum P(2) = 3.5e-14
Identities = 27/69 (39%), Positives = 38/69 (55%)
Query: 11 HQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDET--PEGKWSCPRCVSDGPPETASPP 68
+ DYC+ C++GG ++ CD CP ++HL C DP L E P G+W C C + + PP
Sbjct: 52 NHDYCDACEEGGNLLCCDRCPSSFHLQCHDPPLSEEDIPSGQWLCHSCRMS---KLSQPP 108
Query: 69 AEEVKEKEV 77
A K V
Sbjct: 109 ASSSKASSV 117
Score = 103 (41.3 bits), Expect = 0.00099, P = 0.00099
Identities = 18/41 (43%), Positives = 21/41 (51%)
Query: 14 YCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCP 54
YC + +I CD CP +H CLDP L P G W CP
Sbjct: 261 YCTRSCKRAPLISCDYCPLYFHQDCLDPPLTALPAGLWMCP 301
Score = 64 (27.6 bits), Expect = 3.5e-14, Sum P(2) = 3.5e-14
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 79 CAK-CKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCP 120
C + CK + C+ C +H CL P+ LP W CP
Sbjct: 262 CTRSCKRA--PLISCDYCPLYFHQDCLDPPLTA-LPAGLWMCP 301
>ZFIN|ZDB-GENE-071008-4 [details] [associations]
symbol:aire "autoimmune regulator" species:7955
"Danio rerio" [GO:0045182 "translation regulator activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006959
"humoral immune response" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000770
InterPro:IPR001965 InterPro:IPR004865 InterPro:IPR008087
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01342 Pfam:PF03172
PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414
SMART:SM00184 SMART:SM00249 ZFIN:ZDB-GENE-071008-4 GO:GO:0005634
GO:GO:0005737 GO:GO:0006417 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0045182 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0006959 Gene3D:3.10.390.10 InterPro:IPR010919
SUPFAM:SSF63763 GeneTree:ENSGT00440000034278 EMBL:BX649390
IPI:IPI00876716 Ensembl:ENSDART00000079317 Bgee:F1Q623
Uniprot:F1Q623
Length = 513
Score = 165 (63.1 bits), Expect = 3.6e-14, Sum P(2) = 3.6e-14
Identities = 33/67 (49%), Positives = 36/67 (53%)
Query: 10 EHQD-YCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVS----DGPPET 64
EH D C VC+ GGE+I CD CPRA+HL CL P L P G W C C S D
Sbjct: 291 EHNDDECAVCKDGGELICCDGCPRAFHLSCLVPPLTSIPRGTWRCQLCQSNRLKDRTYTH 350
Query: 65 ASPPAEE 71
PPA E
Sbjct: 351 VQPPATE 357
Score = 48 (22.0 bits), Expect = 3.6e-14, Sum P(2) = 3.6e-14
Identities = 16/61 (26%), Positives = 21/61 (34%)
Query: 79 CAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKCSCPPLPGKLEDMASLL 138
C C + + C C +YH C P +C CS PG D +S
Sbjct: 405 CGICYLTRGELITCPQCLQAYHALC-------NFPNGRTRCRNCSRSWGPGN--DNSSTC 455
Query: 139 R 139
R
Sbjct: 456 R 456
>UNIPROTKB|C9JFR1 [details] [associations]
symbol:AIRE "Autoimmune regulator" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:AP001060 IPI:IPI00031188
HGNC:HGNC:360 ProteinModelPortal:C9JFR1 SMR:C9JFR1 STRING:C9JFR1
Ensembl:ENST00000329347 HOGENOM:HOG000207903 ArrayExpress:C9JFR1
Bgee:C9JFR1 Uniprot:C9JFR1
Length = 244
Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 32/67 (47%), Positives = 41/67 (61%)
Query: 10 EHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASPPA 69
+++D C VC+ GGE+I CD CPRA+HL CL P L E P G W C C+ E P A
Sbjct: 87 KNEDECAVCRDGGELICCDGCPRAFHLACLSPPLREIPSGTWRCSSCLQATVQEV-QPRA 145
Query: 70 EEVKEKE 76
EE + +E
Sbjct: 146 EEPRPQE 152
>UNIPROTKB|E2QYC0 [details] [associations]
symbol:PHF12 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 OMA:MSSQAQG
GeneTree:ENSGT00440000033777 EMBL:AAEX03006672
Ensembl:ENSCAFT00000029911 Uniprot:E2QYC0
Length = 910
Score = 146 (56.5 bits), Expect = 4.9e-14, Sum P(3) = 4.9e-14
Identities = 24/50 (48%), Positives = 33/50 (66%)
Query: 9 TEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDET--PEGKWSCPRC 56
T H D C+ C++GG+++ CD CP A+HL C +P L E P G+W C RC
Sbjct: 54 TNH-DSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRC 102
Score = 102 (41.0 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 17/43 (39%), Positives = 23/43 (53%)
Query: 15 CEVCQQG---GEIILCDTCPRAYHLCCLDPELDETPEGKWSCP 54
C C + +I CD CP +H+ CL+P L P G+W CP
Sbjct: 274 CFTCNRSCRVAPLIQCDYCPLLFHMDCLEPPLTAMPLGRWMCP 316
Score = 61 (26.5 bits), Expect = 8.8e-13, Sum P(2) = 8.8e-13
Identities = 22/85 (25%), Positives = 33/85 (38%)
Query: 52 SCPRCVSDGPPETASPPAEEVKEKEVLCAKCKSPGDQFLLCETCNGSYH-------PHCL 104
SCP +S + SPP + +++ C+ C + C T NG PH
Sbjct: 495 SCPSGISTQNSLSCSPPHQPPALEDINCSSCVEKSKK-APCGTANGPVSTEVKANGPHLY 553
Query: 105 PDPIEGELPTSGWKCPKCSCPPLPG 129
P + P + P + P LPG
Sbjct: 554 SSPTDSTDPR---RLPGANTP-LPG 574
Score = 60 (26.2 bits), Expect = 4.9e-14, Sum P(3) = 4.9e-14
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 92 CETCNGSYHPHCLPDPIEGELPTSGWKCP 120
C+ C +H CL P+ +P W CP
Sbjct: 289 CDYCPLLFHMDCLEPPLTA-MPLGRWMCP 316
Score = 36 (17.7 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 9/32 (28%), Positives = 14/32 (43%)
Query: 97 GSYHPHCLPDPIEGELPTSGWKCPKCSCPPLP 128
G H + ++ E T CP+ S P+P
Sbjct: 591 GGLQNHTVGIIVKTENATGPSSCPQRSLVPVP 622
Score = 33 (16.7 bits), Expect = 4.9e-14, Sum P(3) = 4.9e-14
Identities = 7/13 (53%), Positives = 8/13 (61%)
Query: 122 CSCPPLPGKLEDM 134
CS P P LED+
Sbjct: 508 CSPPHQPPALEDI 520
>UNIPROTKB|F1LM99 [details] [associations]
symbol:F1LM99 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000253 InterPro:IPR001965 InterPro:IPR008984
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50006 PROSITE:PS50016
SMART:SM00249 GO:GO:0017053 GO:GO:0046872 GO:GO:0008270
Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0035091 GO:GO:0001106
GO:GO:0016580 OMA:MSSQAQG GeneTree:ENSGT00440000033777
IPI:IPI00369959 Ensembl:ENSRNOT00000056234 ArrayExpress:F1LM99
Uniprot:F1LM99
Length = 1003
Score = 146 (56.5 bits), Expect = 5.5e-14, Sum P(3) = 5.5e-14
Identities = 24/50 (48%), Positives = 33/50 (66%)
Query: 9 TEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDET--PEGKWSCPRC 56
T H D C+ C++GG+++ CD CP A+HL C +P L E P G+W C RC
Sbjct: 54 TNH-DSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRC 102
Score = 102 (41.0 bits), Expect = 9.0e-07, Sum P(2) = 9.0e-07
Identities = 17/46 (36%), Positives = 24/46 (52%)
Query: 9 TEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCP 54
T H + + +I CD CP +H+ CL+P L P G+W CP
Sbjct: 270 THHISFLRRSCRVAPLIQCDYCPLLFHMDCLEPPLTAMPLGRWMCP 315
Score = 63 (27.2 bits), Expect = 6.9e-13, Sum P(2) = 6.9e-13
Identities = 22/85 (25%), Positives = 33/85 (38%)
Query: 52 SCPRCVSDGPPETASPPAEEVKEKEVLCAKCKSPGDQFLLCETCNGSYH-------PHCL 104
SCP +S SPP + +++ C+ C + C T NG + PH
Sbjct: 494 SCPSAMSTQNSLGCSPPHQPPTLEDISCSSCVEKSKK-APCGTANGPVNTEVKANGPHLY 552
Query: 105 PDPIEGELPTSGWKCPKCSCPPLPG 129
P + P + P + P LPG
Sbjct: 553 SSPTDSSDPR---RLPGANTP-LPG 573
Score = 60 (26.2 bits), Expect = 5.5e-14, Sum P(3) = 5.5e-14
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 92 CETCNGSYHPHCLPDPIEGELPTSGWKCP 120
C+ C +H CL P+ +P W CP
Sbjct: 288 CDYCPLLFHMDCLEPPLTA-MPLGRWMCP 315
Score = 37 (18.1 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 9/32 (28%), Positives = 14/32 (43%)
Query: 97 GSYHPHCLPDPIEGELPTSGWKCPKCSCPPLP 128
G H + ++ E T CP+ S P+P
Sbjct: 590 GGLQNHAVGIIVKTENATGPSSCPQRSLVPVP 621
Score = 34 (17.0 bits), Expect = 5.5e-14, Sum P(3) = 5.5e-14
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 122 CSCPPLPGKLEDMA 135
CS P P LED++
Sbjct: 507 CSPPHQPPTLEDIS 520
>MGI|MGI:1924057 [details] [associations]
symbol:Phf12 "PHD finger protein 12" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0001106 "RNA
polymerase II transcription corepressor activity" evidence=ISO]
[GO:0001222 "transcription corepressor binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016580 "Sin3 complex" evidence=ISO]
[GO:0017053 "transcriptional repressor complex" evidence=ISO]
[GO:0035091 "phosphatidylinositol binding" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000253 InterPro:IPR001965 InterPro:IPR008984
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50006 PROSITE:PS50016
SMART:SM00249 MGI:MGI:1924057 GO:GO:0017053 GO:GO:0046872
GO:GO:0008270 Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0035091 GO:GO:0001106
GO:GO:0016580 EMBL:AL669840 CTD:57649 eggNOG:NOG145066
HOGENOM:HOG000220810 HOVERGEN:HBG057884 OMA:MSSQAQG
OrthoDB:EOG4VHK63 ChiTaRS:PHF12 EMBL:AL845484 EMBL:BC043080
EMBL:AK129383 IPI:IPI00330525 IPI:IPI00515364 RefSeq:NP_777277.2
UniGene:Mm.274329 ProteinModelPortal:Q5SPL2 SMR:Q5SPL2
DIP:DIP-59633N PhosphoSite:Q5SPL2 PRIDE:Q5SPL2
Ensembl:ENSMUST00000049167 Ensembl:ENSMUST00000108360 GeneID:268448
KEGG:mmu:268448 GeneTree:ENSGT00440000033777 InParanoid:Q5SPL2
NextBio:392291 Bgee:Q5SPL2 CleanEx:MM_PHF12 Genevestigator:Q5SPL2
GermOnline:ENSMUSG00000037791 Uniprot:Q5SPL2
Length = 1003
Score = 146 (56.5 bits), Expect = 5.5e-14, Sum P(3) = 5.5e-14
Identities = 24/50 (48%), Positives = 33/50 (66%)
Query: 9 TEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDET--PEGKWSCPRC 56
T H D C+ C++GG+++ CD CP A+HL C +P L E P G+W C RC
Sbjct: 54 TNH-DSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRC 102
Score = 102 (41.0 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 17/43 (39%), Positives = 23/43 (53%)
Query: 15 CEVCQQG---GEIILCDTCPRAYHLCCLDPELDETPEGKWSCP 54
C C + +I CD CP +H+ CL+P L P G+W CP
Sbjct: 274 CFTCNRSCRVAPLIQCDYCPLLFHMDCLEPPLTAMPLGRWMCP 316
Score = 65 (27.9 bits), Expect = 4.3e-13, Sum P(2) = 4.3e-13
Identities = 23/85 (27%), Positives = 33/85 (38%)
Query: 52 SCPRCVSDGPPETASPPAEEVKEKEVLCAKCKSPGDQFLLCETCNGSYH-------PHCL 104
SCP VS SPP + +++ C+ C + C T NG + PH
Sbjct: 495 SCPSAVSTQNSLGCSPPHQPPTLEDISCSSCVEKSKK-APCGTANGPVNTEIKANGPHLY 553
Query: 105 PDPIEGELPTSGWKCPKCSCPPLPG 129
P + P + P + P LPG
Sbjct: 554 SSPTDSTDPR---RLPGANTP-LPG 574
Score = 60 (26.2 bits), Expect = 5.5e-14, Sum P(3) = 5.5e-14
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 92 CETCNGSYHPHCLPDPIEGELPTSGWKCP 120
C+ C +H CL P+ +P W CP
Sbjct: 289 CDYCPLLFHMDCLEPPLTA-MPLGRWMCP 316
Score = 34 (17.0 bits), Expect = 5.5e-14, Sum P(3) = 5.5e-14
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 122 CSCPPLPGKLEDMA 135
CS P P LED++
Sbjct: 508 CSPPHQPPTLEDIS 521
Score = 33 (16.7 bits), Expect = 8.8e-10, Sum P(2) = 8.8e-10
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 108 IEGELPTSGWKCPKCSCPPLP 128
++ E T CP+ S P+P
Sbjct: 601 VKTENATGPSSCPQRSLVPVP 621
>UNIPROTKB|F1RNA4 [details] [associations]
symbol:PHF12 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035091 "phosphatidylinositol binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0016580 "Sin3 complex" evidence=IEA] [GO:0001222 "transcription
corepressor binding" evidence=IEA] [GO:0001106 "RNA polymerase II
transcription corepressor activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR000253 InterPro:IPR001965
InterPro:IPR008984 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50006
PROSITE:PS50016 SMART:SM00249 GO:GO:0017053 GO:GO:0046872
GO:GO:0008270 Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0035091 GO:GO:0001106
GO:GO:0016580 CTD:57649 OMA:MSSQAQG GeneTree:ENSGT00440000033777
EMBL:FP236132 RefSeq:XP_003131823.2 UniGene:Ssc.50204
Ensembl:ENSSSCT00000019351 GeneID:100515341 KEGG:ssc:100515341
Uniprot:F1RNA4
Length = 1004
Score = 146 (56.5 bits), Expect = 5.5e-14, Sum P(3) = 5.5e-14
Identities = 24/50 (48%), Positives = 33/50 (66%)
Query: 9 TEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDET--PEGKWSCPRC 56
T H D C+ C++GG+++ CD CP A+HL C +P L E P G+W C RC
Sbjct: 54 TNH-DSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRC 102
Score = 102 (41.0 bits), Expect = 9.0e-07, Sum P(2) = 9.0e-07
Identities = 17/43 (39%), Positives = 23/43 (53%)
Query: 15 CEVCQQG---GEIILCDTCPRAYHLCCLDPELDETPEGKWSCP 54
C C + +I CD CP +H+ CL+P L P G+W CP
Sbjct: 274 CFTCNRSCRVAPLIQCDYCPLLFHMDCLEPPLTAMPLGRWMCP 316
Score = 63 (27.2 bits), Expect = 7.0e-13, Sum P(2) = 7.0e-13
Identities = 22/85 (25%), Positives = 34/85 (40%)
Query: 52 SCPRCVSDGPPETASPPAEEVKEKEVLCAKCKSPGDQFLLCETCNGSYH-------PHCL 104
SCP +S + SPP + +++ C+ C + C T NG + PH
Sbjct: 495 SCPSGLSTQNSLSCSPPHQPPTLEDISCSSCAEKSKK-APCGTANGPVNTEVKANGPHLY 553
Query: 105 PDPIEGELPTSGWKCPKCSCPPLPG 129
P + P + P + P LPG
Sbjct: 554 SSPTDSTDPR---RLPGANTP-LPG 574
Score = 60 (26.2 bits), Expect = 5.5e-14, Sum P(3) = 5.5e-14
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 92 CETCNGSYHPHCLPDPIEGELPTSGWKCP 120
C+ C +H CL P+ +P W CP
Sbjct: 289 CDYCPLLFHMDCLEPPLTA-MPLGRWMCP 316
Score = 36 (17.7 bits), Expect = 4.3e-10, Sum P(2) = 4.3e-10
Identities = 9/32 (28%), Positives = 14/32 (43%)
Query: 97 GSYHPHCLPDPIEGELPTSGWKCPKCSCPPLP 128
G H + ++ E T CP+ S P+P
Sbjct: 591 GGLQNHTVGIIVKTENATGPSSCPQRSLVPVP 622
Score = 34 (17.0 bits), Expect = 5.5e-14, Sum P(3) = 5.5e-14
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 122 CSCPPLPGKLEDMA 135
CS P P LED++
Sbjct: 508 CSPPHQPPTLEDIS 521
>UNIPROTKB|E1B7A1 [details] [associations]
symbol:PHF12 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0035091 "phosphatidylinositol binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0016580 "Sin3 complex" evidence=IEA] [GO:0001222 "transcription
corepressor binding" evidence=IEA] [GO:0001106 "RNA polymerase II
transcription corepressor activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR000253 InterPro:IPR001965
InterPro:IPR008984 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50006
PROSITE:PS50016 SMART:SM00249 GO:GO:0017053 GO:GO:0046872
GO:GO:0008270 Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0035091 GO:GO:0001106
GO:GO:0016580 CTD:57649 OMA:MSSQAQG GeneTree:ENSGT00440000033777
EMBL:DAAA02048610 IPI:IPI00688031 RefSeq:NP_001179060.1
UniGene:Bt.52047 PRIDE:E1B7A1 Ensembl:ENSBTAT00000021255
GeneID:507057 KEGG:bta:507057 NextBio:20867881 Uniprot:E1B7A1
Length = 1004
Score = 146 (56.5 bits), Expect = 5.5e-14, Sum P(3) = 5.5e-14
Identities = 24/50 (48%), Positives = 33/50 (66%)
Query: 9 TEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDET--PEGKWSCPRC 56
T H D C+ C++GG+++ CD CP A+HL C +P L E P G+W C RC
Sbjct: 54 TNH-DSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRC 102
Score = 102 (41.0 bits), Expect = 9.0e-07, Sum P(2) = 9.0e-07
Identities = 17/43 (39%), Positives = 23/43 (53%)
Query: 15 CEVCQQG---GEIILCDTCPRAYHLCCLDPELDETPEGKWSCP 54
C C + +I CD CP +H+ CL+P L P G+W CP
Sbjct: 274 CFTCNRSCRVAPLIQCDYCPLLFHMDCLEPPLTAMPLGRWMCP 316
Score = 63 (27.2 bits), Expect = 7.0e-13, Sum P(2) = 7.0e-13
Identities = 22/85 (25%), Positives = 34/85 (40%)
Query: 52 SCPRCVSDGPPETASPPAEEVKEKEVLCAKCKSPGDQFLLCETCNGSYH-------PHCL 104
SCP +S + SPP + +++ C+ C + C T NG + PH
Sbjct: 495 SCPSGLSTQNSLSCSPPHQPPTLEDISCSSCAEKSKK-APCGTANGPVNTEVKANGPHLY 553
Query: 105 PDPIEGELPTSGWKCPKCSCPPLPG 129
P + P + P + P LPG
Sbjct: 554 SSPTDSTDPR---RLPGANTP-LPG 574
Score = 60 (26.2 bits), Expect = 5.5e-14, Sum P(3) = 5.5e-14
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 92 CETCNGSYHPHCLPDPIEGELPTSGWKCP 120
C+ C +H CL P+ +P W CP
Sbjct: 289 CDYCPLLFHMDCLEPPLTA-MPLGRWMCP 316
Score = 34 (17.0 bits), Expect = 5.5e-14, Sum P(3) = 5.5e-14
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 122 CSCPPLPGKLEDMA 135
CS P P LED++
Sbjct: 508 CSPPHQPPTLEDIS 521
>UNIPROTKB|E1C5C7 [details] [associations]
symbol:BPTF "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
GeneTree:ENSGT00660000095339 EMBL:AADN02030018 EMBL:AADN02030019
EMBL:AADN02030020 IPI:IPI00594126 Ensembl:ENSGALT00000005744
ArrayExpress:E1C5C7 Uniprot:E1C5C7
Length = 2789
Score = 157 (60.3 bits), Expect = 5.7e-14, Sum P(2) = 5.7e-14
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 10 EHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASPPA 69
++ D+C VC + G+++ C+TC YHL C+ P L+E PE +W C CV+ P A
Sbjct: 248 QYDDHCRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVCVAHKVPGVTDCVA 307
Query: 70 EEVKEK 75
E K K
Sbjct: 308 EIQKNK 313
Score = 119 (46.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 24/69 (34%), Positives = 36/69 (52%)
Query: 69 AEEVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKCSCPPLP 128
+E V + + C C GD L CETC+ YH C+ P+E E+P W+C C +P
Sbjct: 243 SEGVIQYDDHCRVCHKLGD-LLCCETCSAVYHLECVKPPLE-EVPEDEWQCEVCVAHKVP 300
Query: 129 GKLEDMASL 137
G + +A +
Sbjct: 301 GVTDCVAEI 309
Score = 72 (30.4 bits), Expect = 5.7e-14, Sum P(2) = 5.7e-14
Identities = 18/61 (29%), Positives = 30/61 (49%)
Query: 66 SPPAEEVKEKEVLCAKCKSPGDQ---FLLCETCNGSYHPHCLPD-PIEGELPTSGWKCPK 121
S ++E K+ L CK+P D+ ++ C+ C YH C+ E +L + CP+
Sbjct: 2599 STTSKETKKDTKLYCICKTPYDESKFYIGCDRCQNWYHGRCVGILQSEADL-IDEYVCPQ 2657
Query: 122 C 122
C
Sbjct: 2658 C 2658
>UNIPROTKB|E1C5C8 [details] [associations]
symbol:BPTF "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0001892 "embryonic placenta
development" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007420 "brain development" evidence=IEA]
[GO:0007492 "endoderm development" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA]
[GO:0016589 "NURF complex" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0045893
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0006351
GO:GO:0006338 GO:GO:0000122 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0016589 InterPro:IPR004022
InterPro:IPR018500 InterPro:IPR018501 Pfam:PF02791 SMART:SM00571
PROSITE:PS50827 OMA:DVIMEDF GO:GO:0008094
GeneTree:ENSGT00660000095339 EMBL:AADN02030018 EMBL:AADN02030019
EMBL:AADN02030020 IPI:IPI00601232 Ensembl:ENSGALT00000005741
ArrayExpress:E1C5C8 Uniprot:E1C5C8
Length = 2802
Score = 157 (60.3 bits), Expect = 5.8e-14, Sum P(2) = 5.8e-14
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 10 EHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASPPA 69
++ D+C VC + G+++ C+TC YHL C+ P L+E PE +W C CV+ P A
Sbjct: 248 QYDDHCRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVCVAHKVPGVTDCVA 307
Query: 70 EEVKEK 75
E K K
Sbjct: 308 EIQKNK 313
Score = 119 (46.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 24/69 (34%), Positives = 36/69 (52%)
Query: 69 AEEVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKCSCPPLP 128
+E V + + C C GD L CETC+ YH C+ P+E E+P W+C C +P
Sbjct: 243 SEGVIQYDDHCRVCHKLGD-LLCCETCSAVYHLECVKPPLE-EVPEDEWQCEVCVAHKVP 300
Query: 129 GKLEDMASL 137
G + +A +
Sbjct: 301 GVTDCVAEI 309
Score = 72 (30.4 bits), Expect = 5.8e-14, Sum P(2) = 5.8e-14
Identities = 18/61 (29%), Positives = 30/61 (49%)
Query: 66 SPPAEEVKEKEVLCAKCKSPGDQ---FLLCETCNGSYHPHCLPD-PIEGELPTSGWKCPK 121
S ++E K+ L CK+P D+ ++ C+ C YH C+ E +L + CP+
Sbjct: 2612 STTSKETKKDTKLYCICKTPYDESKFYIGCDRCQNWYHGRCVGILQSEADL-IDEYVCPQ 2670
Query: 122 C 122
C
Sbjct: 2671 C 2671
>CGD|CAL0003038 [details] [associations]
symbol:orf19.6506 species:5476 "Candida albicans" [GO:0032221
"Rpd3S complex" evidence=IEA] [GO:0033698 "Rpd3L complex"
evidence=IEA] [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0060195 "negative
regulation of antisense RNA transcription" evidence=IEA]
[GO:0030174 "regulation of DNA-dependent DNA replication
initiation" evidence=IEA] [GO:0016575 "histone deacetylation"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 CGD:CAL0003038 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 EMBL:AACQ01000020 EMBL:AACQ01000016
eggNOG:NOG145066 RefSeq:XP_720831.1 RefSeq:XP_721344.1
RefSeq:XP_888831.1 ProteinModelPortal:Q5AH34 GeneID:3637022
GeneID:3637451 GeneID:3703842 KEGG:cal:CaO19.13859
KEGG:cal:CaO19.6506 KEGG:cal:CaO19_6506 Uniprot:Q5AH34
Length = 688
Score = 144 (55.7 bits), Expect = 6.3e-14, Sum P(2) = 6.3e-14
Identities = 21/55 (38%), Positives = 32/55 (58%)
Query: 10 EHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPET 64
E+ D+C C G I C+ CP+++H C DP ++E PE +W C C + PE+
Sbjct: 268 ENDDFCFACGMPGIFICCEKCPKSFHFTCCDPPIEEAPEDEWYCRECYTKVHPES 322
Score = 123 (48.4 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 26/64 (40%), Positives = 32/64 (50%)
Query: 70 EEVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKCSCPPLPG 129
EEVKE + C C PG F+ CE C S+H C PIE E P W C +C P
Sbjct: 264 EEVKENDDFCFACGMPGI-FICCEKCPKSFHFTCCDPPIE-EAPEDEWYCRECYTKVHPE 321
Query: 130 KLED 133
++D
Sbjct: 322 SIQD 325
Score = 122 (48.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 32/83 (38%), Positives = 40/83 (48%)
Query: 4 IQDLQTEHQD-Y-CEVCQQGG----EIILCDTCPRAYHLCCLDPEL--DETPEGKWSCPR 55
I DL E+ D Y C C G +I CD CP YH+ CLDP L +T KW CP
Sbjct: 399 IDDLYNENGDPYLCHKCGGSGLNRRTLIHCDYCPLVYHIDCLDPPLFGPKTIGDKWRCPN 458
Query: 56 CVSDGPPETASPPAEEVKEKEVL 78
+ D P+ P + KE V+
Sbjct: 459 HIEDLFPK-GLPKLRQFKETRVI 480
Score = 71 (30.1 bits), Expect = 6.3e-14, Sum P(2) = 6.3e-14
Identities = 19/48 (39%), Positives = 24/48 (50%)
Query: 78 LCAKCKSPG--DQFLL-CETCNGSYHPHCLPDPIEGELPTSG--WKCP 120
LC KC G + L+ C+ C YH CL P+ G T G W+CP
Sbjct: 411 LCHKCGGSGLNRRTLIHCDYCPLVYHIDCLDPPLFGP-KTIGDKWRCP 457
>UNIPROTKB|F1LX76 [details] [associations]
symbol:F1LX76 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
IPI:IPI00361297 Ensembl:ENSRNOT00000020904 ArrayExpress:F1LX76
Uniprot:F1LX76
Length = 2894
Score = 158 (60.7 bits), Expect = 7.8e-14, Sum P(2) = 7.8e-14
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 10 EHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASPPA 69
++ D+C VC + G+++ C+TC YHL C+ P L+E PE +W C CV+ P A
Sbjct: 366 QYDDHCRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVCVAHKVPGVTDCVA 425
Query: 70 EEVKEK 75
E K K
Sbjct: 426 EVQKNK 431
Score = 118 (46.6 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 24/69 (34%), Positives = 36/69 (52%)
Query: 69 AEEVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKCSCPPLP 128
+E V + + C C GD L CETC+ YH C+ P+E E+P W+C C +P
Sbjct: 361 SEGVIQYDDHCRVCHKLGD-LLCCETCSAVYHLECVKPPLE-EVPEDEWQCEVCVAHKVP 418
Query: 129 GKLEDMASL 137
G + +A +
Sbjct: 419 GVTDCVAEV 427
Score = 70 (29.7 bits), Expect = 7.8e-14, Sum P(2) = 7.8e-14
Identities = 18/61 (29%), Positives = 30/61 (49%)
Query: 66 SPPAEEVKEKEVLCAKCKSPGDQ---FLLCETCNGSYHPHCLPD-PIEGELPTSGWKCPK 121
S ++E K+ L CK+P D+ ++ C+ C +H C+ E EL + CP+
Sbjct: 2704 STTSKEAKKDTRLYCICKTPYDESKFYIGCDRCQNWFHGRCVGILQSEAEL-IDEYVCPQ 2762
Query: 122 C 122
C
Sbjct: 2763 C 2763
>UNIPROTKB|F1M1V5 [details] [associations]
symbol:F1M1V5 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
IPI:IPI00782357 Ensembl:ENSRNOT00000055099 ArrayExpress:F1M1V5
Uniprot:F1M1V5
Length = 2952
Score = 158 (60.7 bits), Expect = 8.2e-14, Sum P(2) = 8.2e-14
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 10 EHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASPPA 69
++ D+C VC + G+++ C+TC YHL C+ P L+E PE +W C CV+ P A
Sbjct: 366 QYDDHCRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVCVAHKVPGVTDCVA 425
Query: 70 EEVKEK 75
E K K
Sbjct: 426 EVQKNK 431
Score = 118 (46.6 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 24/69 (34%), Positives = 36/69 (52%)
Query: 69 AEEVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKCSCPPLP 128
+E V + + C C GD L CETC+ YH C+ P+E E+P W+C C +P
Sbjct: 361 SEGVIQYDDHCRVCHKLGD-LLCCETCSAVYHLECVKPPLE-EVPEDEWQCEVCVAHKVP 418
Query: 129 GKLEDMASL 137
G + +A +
Sbjct: 419 GVTDCVAEV 427
Score = 70 (29.7 bits), Expect = 8.2e-14, Sum P(2) = 8.2e-14
Identities = 18/61 (29%), Positives = 30/61 (49%)
Query: 66 SPPAEEVKEKEVLCAKCKSPGDQ---FLLCETCNGSYHPHCLPD-PIEGELPTSGWKCPK 121
S ++E K+ L CK+P D+ ++ C+ C +H C+ E EL + CP+
Sbjct: 2762 STTSKEAKKDTRLYCICKTPYDESKFYIGCDRCQNWFHGRCVGILQSEAEL-IDEYVCPQ 2820
Query: 122 C 122
C
Sbjct: 2821 C 2821
>UNIPROTKB|F1M1V4 [details] [associations]
symbol:F1M1V4 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0045893
GO:GO:0007420 GO:GO:0009952 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0006351 GO:GO:0006338 GO:GO:0000122
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0007492
GO:GO:0001892 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0016589 InterPro:IPR004022
InterPro:IPR018500 InterPro:IPR018501 Pfam:PF02791 SMART:SM00571
PROSITE:PS50827 GO:GO:0008094 IPI:IPI00949885
Ensembl:ENSRNOT00000055100 ArrayExpress:F1M1V4 Uniprot:F1M1V4
Length = 3013
Score = 158 (60.7 bits), Expect = 8.5e-14, Sum P(2) = 8.5e-14
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 10 EHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASPPA 69
++ D+C VC + G+++ C+TC YHL C+ P L+E PE +W C CV+ P A
Sbjct: 366 QYDDHCRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVCVAHKVPGVTDCVA 425
Query: 70 EEVKEK 75
E K K
Sbjct: 426 EVQKNK 431
Score = 118 (46.6 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 24/69 (34%), Positives = 36/69 (52%)
Query: 69 AEEVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKCSCPPLP 128
+E V + + C C GD L CETC+ YH C+ P+E E+P W+C C +P
Sbjct: 361 SEGVIQYDDHCRVCHKLGD-LLCCETCSAVYHLECVKPPLE-EVPEDEWQCEVCVAHKVP 418
Query: 129 GKLEDMASL 137
G + +A +
Sbjct: 419 GVTDCVAEV 427
Score = 70 (29.7 bits), Expect = 8.5e-14, Sum P(2) = 8.5e-14
Identities = 18/61 (29%), Positives = 30/61 (49%)
Query: 66 SPPAEEVKEKEVLCAKCKSPGDQ---FLLCETCNGSYHPHCLPD-PIEGELPTSGWKCPK 121
S ++E K+ L CK+P D+ ++ C+ C +H C+ E EL + CP+
Sbjct: 2823 STTSKEAKKDTRLYCICKTPYDESKFYIGCDRCQNWFHGRCVGILQSEAEL-IDEYVCPQ 2881
Query: 122 C 122
C
Sbjct: 2882 C 2882
>MGI|MGI:1922855 [details] [associations]
symbol:Kdm5b "lysine (K)-specific demethylase 5B"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003714 "transcription corepressor activity"
evidence=ISO] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=IDA] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=ISO] [GO:0034648 "histone demethylase activity
(H3-dimethyl-K4 specific)" evidence=ISO] [GO:0034720 "histone H3-K4
demethylation" evidence=ISO;IDA] [GO:0034721 "histone H3-K4
demethylation, trimethyl-H3-K4-specific" evidence=ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 MGI:MGI:1922855 GO:GO:0003714 GO:GO:0045892
GO:GO:0005730 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 GeneTree:ENSGT00530000063118
GO:GO:0034647 KO:K11446 HOGENOM:HOG000290719 CTD:10765
OrthoDB:EOG4HT8RC OMA:CENEKEM EMBL:AY082429 EMBL:AY082430
EMBL:AK220451 EMBL:BC048180 EMBL:BC057318 EMBL:AK041304
IPI:IPI00330824 IPI:IPI00776332 RefSeq:NP_690855.2 UniGene:Mm.28995
UniGene:Mm.391994 PDB:2EQY PDBsum:2EQY ProteinModelPortal:Q80Y84
SMR:Q80Y84 IntAct:Q80Y84 STRING:Q80Y84 PhosphoSite:Q80Y84
PRIDE:Q80Y84 Ensembl:ENSMUST00000047714 Ensembl:ENSMUST00000112198
GeneID:75605 KEGG:mmu:75605 UCSC:uc007csg.2 UCSC:uc011wsg.1
InParanoid:Q80Y84 EvolutionaryTrace:Q80Y84 NextBio:343484
Bgee:Q80Y84 Genevestigator:Q80Y84 Uniprot:Q80Y84
Length = 1544
Score = 122 (48.0 bits), Expect = 8.9e-14, Sum P(2) = 8.9e-14
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 15 CEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVS 58
C +C G + ++LCD C +YH CL P L + P+G W CP+C++
Sbjct: 312 CLLCGSGNDEDRLLLCDGCDDSYHTFCLVPPLHDVPKGDWRCPKCLA 358
Score = 118 (46.6 bits), Expect = 9.4e-07, Sum P(2) = 9.4e-07
Identities = 27/83 (32%), Positives = 38/83 (45%)
Query: 43 LDETPEGKWSCP-RCVSDGPPETASPPAEEVKEKEVLCAKCKSPGDQ--FLLCETCNGSY 99
+ + P K C + P A A V +C C S D+ LLC+ C+ SY
Sbjct: 277 IKQEPTEKKDCELESEKEKPKSRAKKTATAVDL--YVCLLCGSGNDEDRLLLCDGCDDSY 334
Query: 100 HPHCLPDPIEGELPTSGWKCPKC 122
H CL P+ ++P W+CPKC
Sbjct: 335 HTFCLVPPLH-DVPKGDWRCPKC 356
Score = 100 (40.3 bits), Expect = 8.9e-14, Sum P(2) = 8.9e-14
Identities = 24/76 (31%), Positives = 37/76 (48%)
Query: 68 PAEEVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC---SC 124
P ++++ K LC K +P + CE C ++H C+ P + + W CP C
Sbjct: 1170 PVQDLEMKVCLCQK--TPATPMIQCELCRDAFHTSCVAAPSISQ-SSRIWLCPHCRRSEK 1226
Query: 125 PPLPGKLEDMASLLRL 140
PPL L +ASL R+
Sbjct: 1227 PPLEKILPLLASLQRI 1242
Score = 36 (17.7 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 5/5 (100%), Positives = 5/5 (100%)
Query: 122 CSCPP 126
CSCPP
Sbjct: 723 CSCPP 727
>UNIPROTKB|F1PPM4 [details] [associations]
symbol:AIRE "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045182 "translation regulator activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006959 "humoral immune response" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000770
InterPro:IPR001965 InterPro:IPR004865 InterPro:IPR008087
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01342 Pfam:PF03172
PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414
SMART:SM00249 SMART:SM00258 GO:GO:0005634 GO:GO:0005737
GO:GO:0006417 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0045182 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 OMA:NDDECAV GO:GO:0006959 Gene3D:3.10.390.10
InterPro:IPR010919 SUPFAM:SSF63763 GeneTree:ENSGT00440000034278
EMBL:AAEX03016632 Ensembl:ENSCAFT00000017065 Uniprot:F1PPM4
Length = 547
Score = 187 (70.9 bits), Expect = 9.9e-14, P = 9.9e-14
Identities = 33/70 (47%), Positives = 43/70 (61%)
Query: 7 LQTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETAS 66
LQ +++D C VC+ GGE+I CD CPRA+HL CL P L + P G W C C+ G +
Sbjct: 291 LQQKNEDECAVCRDGGELICCDGCPRAFHLACLSPPLHDIPSGTWRCSSCLQ-GRAQRDV 349
Query: 67 PPAEEVKEKE 76
P AEE +E
Sbjct: 350 PRAEEPPPQE 359
Score = 111 (44.1 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 25/80 (31%), Positives = 39/80 (48%)
Query: 47 PEGKWSCPRCVSDG----PPETASPPAEEVKEKEVLCAKCKSPGDQFLLCETCNGSYHPH 102
PEG PR G PP S P + K ++ CA C+ G + + C+ C ++H
Sbjct: 265 PEGGGD-PRAGQPGRVQAPPALPSEPQLQQKNEDE-CAVCRD-GGELICCDGCPRAFHLA 321
Query: 103 CLPDPIEGELPTSGWKCPKC 122
CL P+ ++P+ W+C C
Sbjct: 322 CLSPPLH-DIPSGTWRCSSC 340
>UNIPROTKB|H7C212 [details] [associations]
symbol:MLL3 "Histone-lysine N-methyltransferase MLL3"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 EMBL:AC005631 EMBL:AC006017 EMBL:AC104692
HGNC:HGNC:13726 ChiTaRS:MLL3 EMBL:AC006474
ProteinModelPortal:H7C212 Ensembl:ENST00000418673 Uniprot:H7C212
Length = 228
Score = 124 (48.7 bits), Expect = 9.5e-08, P = 9.5e-08
Identities = 21/46 (45%), Positives = 26/46 (56%)
Query: 15 CEVCQQG---GEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCV 57
CE C + G ++LCD C +YH CLDP L P+G W C CV
Sbjct: 166 CEACGKATDPGRLLLCDDCDISYHTYCLDPPLQTVPKGGWKCKWCV 211
Score = 117 (46.2 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 79 CAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC 122
C K PG + LLC+ C+ SYH +CL P++ +P GWKC C
Sbjct: 169 CGKATDPG-RLLLCDDCDISYHTYCLDPPLQ-TVPKGGWKCKWC 210
Score = 99 (39.9 bits), Expect = 0.00066, P = 0.00066
Identities = 21/65 (32%), Positives = 30/65 (46%)
Query: 78 LCAKCKSPGD----QFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKCSCPPLPGKLED 133
+C C S G + L C C YHP+C+ I + + GW+C +C+ GK D
Sbjct: 115 MCVVCGSFGQGAEGRLLACSQCGQCYHPYCVSIKITKVVLSKGWRCLECTVCEACGKATD 174
Query: 134 MASLL 138
LL
Sbjct: 175 PGRLL 179
Score = 80 (33.2 bits), Expect = 1.0e-13, Sum P(2) = 1.0e-13
Identities = 19/57 (33%), Positives = 27/57 (47%)
Query: 6 DLQTEHQDYCEVCQ---QG--GEIILCDTCPRAYHLCCLDPELDETPEGK-WSCPRC 56
D T +QD C VC QG G ++ C C + YH C+ ++ + K W C C
Sbjct: 107 DKFTLNQDMCVVCGSFGQGAEGRLLACSQCGQCYHPYCVSIKITKVVLSKGWRCLEC 163
>RGD|1565602 [details] [associations]
symbol:Kdm5b "lysine (K)-specific demethylase 5B" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=ISO] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=IEA;ISO] [GO:0034648 "histone demethylase activity
(H3-dimethyl-K4 specific)" evidence=IEA;ISO] [GO:0034720 "histone
H3-K4 demethylation" evidence=ISO] [GO:0034721 "histone H3-K4
demethylation, trimethyl-H3-K4-specific" evidence=ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
RGD:1565602 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063118 GO:GO:0034647
OrthoDB:EOG4HT8RC IPI:IPI00554242 Ensembl:ENSRNOT00000006290
UCSC:RGD:1565602 Uniprot:D3ZUT4
Length = 1546
Score = 121 (47.7 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 15 CEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVS 58
C +C G + ++LCD C +YH CL P L + P+G W CP+C++
Sbjct: 314 CLLCGSGNDEDRLLLCDGCDDSYHTFCLLPPLHDVPKGDWRCPKCLA 360
Score = 117 (46.2 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 25/66 (37%), Positives = 33/66 (50%)
Query: 59 DGPPETASPPAEEVKEKEVLCAKCKSPGDQ--FLLCETCNGSYHPHCLPDPIEGELPTSG 116
D P A A V +C C S D+ LLC+ C+ SYH CL P+ ++P
Sbjct: 296 DKPKSRAKKTATAVDL--YVCLLCGSGNDEDRLLLCDGCDDSYHTFCLLPPLH-DVPKGD 352
Query: 117 WKCPKC 122
W+CPKC
Sbjct: 353 WRCPKC 358
Score = 100 (40.3 bits), Expect = 1.1e-13, Sum P(2) = 1.1e-13
Identities = 26/77 (33%), Positives = 38/77 (49%)
Query: 68 PAEEVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSG-WKCPKC---S 123
PA++V+ K LC K +P + CE C ++H C+ + +S W CP C
Sbjct: 1172 PAQDVETKVCLCQK--TPATPMIQCELCRDAFHTSCVA--VSSISQSSRIWLCPHCRRSE 1227
Query: 124 CPPLPGKLEDMASLLRL 140
PPL L +ASL R+
Sbjct: 1228 KPPLEKILPLLASLQRI 1244
Score = 36 (17.7 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 5/5 (100%), Positives = 5/5 (100%)
Query: 122 CSCPP 126
CSCPP
Sbjct: 725 CSCPP 729
>SGD|S000004680 [details] [associations]
symbol:RCO1 "Essential subunit of the histone deacetylase
Rpd3S complex" species:4932 "Saccharomyces cerevisiae" [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0060195 "negative regulation of
antisense RNA transcription" evidence=IMP] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0033698 "Rpd3L complex" evidence=IDA] [GO:0016575
"histone deacetylation" evidence=IMP] [GO:0032221 "Rpd3S complex"
evidence=IDA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0030174 "regulation of DNA-dependent DNA
replication initiation" evidence=IMP] [GO:0006368 "transcription
elongation from RNA polymerase II promoter" evidence=IGI]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
SGD:S000004680 GO:GO:0046872 GO:GO:0008270 EMBL:Z48952
EMBL:BK006946 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006368 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0033698 GO:GO:0016575 GO:GO:0030174
GO:GO:0032221 GO:GO:0060195 eggNOG:NOG145066
GeneTree:ENSGT00440000033777 PIR:S52835 RefSeq:NP_013791.1
ProteinModelPortal:Q04779 SMR:Q04779 DIP:DIP-1959N IntAct:Q04779
MINT:MINT-497703 STRING:Q04779 PaxDb:Q04779 PeptideAtlas:Q04779
EnsemblFungi:YMR075W GeneID:855097 KEGG:sce:YMR075W CYGD:YMR075w
HOGENOM:HOG000066043 OMA:FLCCDTC OrthoDB:EOG4TQQJV NextBio:978414
Genevestigator:Q04779 GermOnline:YMR075W Uniprot:Q04779
Length = 684
Score = 156 (60.0 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 10 EHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDET--PEGKWSCPRC 56
E++D+C C Q G + CDTCP+++H CLDP +D P+G W C C
Sbjct: 258 ENEDFCSACNQSGSFLCCDTCPKSFHFLCLDPPIDPNNLPKGDWHCNEC 306
Score = 110 (43.8 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 21/50 (42%), Positives = 26/50 (52%)
Query: 74 EKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIE-GELPTSGWKCPKC 122
E E C+ C G FL C+TC S+H CL PI+ LP W C +C
Sbjct: 258 ENEDFCSACNQSGS-FLCCDTCPKSFHFLCLDPPIDPNNLPKGDWHCNEC 306
Score = 56 (24.8 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 90 LLCETCNGSYHPHCLPDPIEGELPTSGWKCP 120
+ C+ C +H C+P L S WKCP
Sbjct: 438 MTCDYCQTPWHLDCVPRASFKNLG-SKWKCP 467
Score = 38 (18.4 bits), Expect = 8.7e-12, Sum P(2) = 8.7e-12
Identities = 10/23 (43%), Positives = 13/23 (56%)
Query: 84 SPGDQFLLCETCN----GSY-HP 101
S +FL+C CN GS+ HP
Sbjct: 409 SNSGKFLICYKCNQTRLGSWSHP 431
>UNIPROTKB|F1NRC4 [details] [associations]
symbol:KDM5B "Lysine-specific demethylase 5B" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0034647 "histone
demethylase activity (H3-trimethyl-K4 specific)" evidence=IEA]
[GO:0034648 "histone demethylase activity (H3-dimethyl-K4
specific)" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 GeneTree:ENSGT00530000063118
GO:GO:0034647 IPI:IPI00578699 EMBL:AADN02063991 EMBL:AADN02063988
EMBL:AADN02063989 EMBL:AADN02063990 Ensembl:ENSGALT00000000582
ArrayExpress:F1NRC4 Uniprot:F1NRC4
Length = 1510
Score = 121 (47.7 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 15 CEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVS 58
C +C G + ++LCD C +YH CL P L + P+G W CP+C++
Sbjct: 275 CLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPQCLA 321
Score = 112 (44.5 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 78 LCAKCKSPGDQ--FLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC 122
+C C S D+ LLC+ C+ SYH CL P+ ++P W+CP+C
Sbjct: 274 VCLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLH-DVPKGDWRCPQC 319
Score = 99 (39.9 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 27/75 (36%), Positives = 36/75 (48%)
Query: 69 AEEVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC---SCP 125
+EE E +V C K P + CE C G +H C+ P + P W CP+C P
Sbjct: 1133 SEEDAELKV-CVCQKEPAAPMIQCELCRGFFHTGCVSVPHALQGPRV-WLCPQCRRSEKP 1190
Query: 126 PLPGKLEDMASLLRL 140
PL L +ASL R+
Sbjct: 1191 PLEKILPLLASLQRI 1205
>UNIPROTKB|F1NUR9 [details] [associations]
symbol:KDM5B "Lysine-specific demethylase 5B" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0034647 "histone
demethylase activity (H3-trimethyl-K4 specific)" evidence=IEA]
[GO:0034648 "histone demethylase activity (H3-dimethyl-K4
specific)" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 GeneTree:ENSGT00530000063118
GO:GO:0034647 OMA:CENEKEM EMBL:AADN02063991 EMBL:AADN02063988
EMBL:AADN02063989 EMBL:AADN02063990 IPI:IPI00823098
Ensembl:ENSGALT00000040834 ArrayExpress:F1NUR9 Uniprot:F1NUR9
Length = 1521
Score = 121 (47.7 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 15 CEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVS 58
C +C G + ++LCD C +YH CL P L + P+G W CP+C++
Sbjct: 286 CLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPQCLA 332
Score = 112 (44.5 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 78 LCAKCKSPGDQ--FLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC 122
+C C S D+ LLC+ C+ SYH CL P+ ++P W+CP+C
Sbjct: 285 VCLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLH-DVPKGDWRCPQC 330
Score = 99 (39.9 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 27/75 (36%), Positives = 36/75 (48%)
Query: 69 AEEVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC---SCP 125
+EE E +V C K P + CE C G +H C+ P + P W CP+C P
Sbjct: 1144 SEEDAELKV-CVCQKEPAAPMIQCELCRGFFHTGCVSVPHALQGPRV-WLCPQCRRSEKP 1201
Query: 126 PLPGKLEDMASLLRL 140
PL L +ASL R+
Sbjct: 1202 PLEKILPLLASLQRI 1216
>UNIPROTKB|Q5F3R2 [details] [associations]
symbol:KDM5B "Lysine-specific demethylase 5B" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0034721 "histone H3-K4 demethylation,
trimethyl-H3-K4-specific" evidence=ISS] [GO:0034720 "histone H3-K4
demethylation" evidence=ISS] [GO:0034647 "histone demethylase
activity (H3-trimethyl-K4 specific)" evidence=ISS] [GO:0034648
"histone demethylase activity (H3-dimethyl-K4 specific)"
evidence=ISS] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006351 GO:GO:0016706 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 eggNOG:NOG327026
GO:GO:0034647 KO:K11446 HOGENOM:HOG000290719 EMBL:AJ851588
IPI:IPI00578699 RefSeq:NP_001026200.1 UniGene:Gga.7752 HSSP:Q14839
ProteinModelPortal:Q5F3R2 SMR:Q5F3R2 GeneID:421168 KEGG:gga:421168
CTD:10765 InParanoid:Q5F3R2 OrthoDB:EOG4HT8RC NextBio:20823981
Uniprot:Q5F3R2
Length = 1522
Score = 121 (47.7 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 15 CEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVS 58
C +C G + ++LCD C +YH CL P L + P+G W CP+C++
Sbjct: 287 CLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPQCLA 333
Score = 112 (44.5 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 78 LCAKCKSPGDQ--FLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC 122
+C C S D+ LLC+ C+ SYH CL P+ ++P W+CP+C
Sbjct: 286 VCLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLH-DVPKGDWRCPQC 331
Score = 99 (39.9 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 27/75 (36%), Positives = 36/75 (48%)
Query: 69 AEEVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC---SCP 125
+EE E +V C K P + CE C G +H C+ P + P W CP+C P
Sbjct: 1145 SEEDAELKV-CVCQKEPAAPMIQCELCRGFFHTGCVSVPHALQGPRV-WLCPQCRRSEKP 1202
Query: 126 PLPGKLEDMASLLRL 140
PL L +ASL R+
Sbjct: 1203 PLEKILPLLASLQRI 1217
>UNIPROTKB|F1MUR2 [details] [associations]
symbol:KDM5B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0034648 "histone demethylase
activity (H3-dimethyl-K4 specific)" evidence=IEA] [GO:0034647
"histone demethylase activity (H3-trimethyl-K4 specific)"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648
Gene3D:1.10.150.60 SUPFAM:SSF46774 GeneTree:ENSGT00530000063118
GO:GO:0034647 OMA:CENEKEM EMBL:DAAA02043305 IPI:IPI01001710
Ensembl:ENSBTAT00000028871 Uniprot:F1MUR2
Length = 1484
Score = 122 (48.0 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 15 CEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVS 58
C +C G + ++LCD C +YH CL P L + P+G W CP+C++
Sbjct: 252 CLLCGSGSDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKCLA 298
Score = 121 (47.7 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 25/71 (35%), Positives = 36/71 (50%)
Query: 56 CVSDGPPETASPPAEEVKEKEVL--CAKCKSPGDQ--FLLCETCNGSYHPHCLPDPIEGE 111
CV++ E A++ L C C S D+ LLC+ C+ SYH CL P+ +
Sbjct: 227 CVTESEKEKPKSRAKKTTNAVDLYVCLLCGSGSDEDRLLLCDGCDDSYHTFCLIPPLH-D 285
Query: 112 LPTSGWKCPKC 122
+P W+CPKC
Sbjct: 286 VPKGDWRCPKC 296
Score = 97 (39.2 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 24/76 (31%), Positives = 36/76 (47%)
Query: 68 PAEEVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC---SC 124
P +V+ + +C K +P + CE C ++H C+ P + P W CP C
Sbjct: 1110 PVHDVEMRVCVCQK--APAAPMVQCELCRDAFHTSCVAAPSIPQGPRV-WLCPNCRRSEK 1166
Query: 125 PPLPGKLEDMASLLRL 140
PPL L +ASL R+
Sbjct: 1167 PPLEKILPLLASLQRI 1182
Score = 40 (19.1 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 7/10 (70%), Positives = 7/10 (70%)
Query: 122 CSCPPLPGKL 131
CSCPP KL
Sbjct: 663 CSCPPYKYKL 672
>UNIPROTKB|I3LDB0 [details] [associations]
symbol:I3LDB0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0001967
"suckling behavior" evidence=IEA] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR017956 InterPro:IPR019787 Pfam:PF00628 Pfam:PF02178
PROSITE:PS50016 SMART:SM00184 SMART:SM00249 SMART:SM00384
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 OMA:SCTVNCN
GeneTree:ENSGT00530000063984 EMBL:FP101987
Ensembl:ENSSSCT00000023373 Uniprot:I3LDB0
Length = 563
Score = 184 (69.8 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 26/46 (56%), Positives = 35/46 (76%)
Query: 11 HQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
H+D+C VC++ G++++CDTC R YHL CLDP L P+G W CPRC
Sbjct: 367 HEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRC 412
Score = 126 (49.4 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 32/97 (32%), Positives = 48/97 (49%)
Query: 26 LCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASPPAEEVKEKEVLCAKCKSP 85
L T P + H PE ++T E ++ P V P SP + + E C+ C+
Sbjct: 323 LTPTSPPSSHPD--SPENEKT-ETTFTFPAPVQ--PVSLPSPTSTDGDIHEDFCSVCRKS 377
Query: 86 GDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC 122
G Q L+C+TC+ YH CL P++ +P W CP+C
Sbjct: 378 G-QLLMCDTCSRVYHLDCLDPPLK-TIPKGMWICPRC 412
>UNIPROTKB|B3KV94 [details] [associations]
symbol:JARID1B "cDNA FLJ16281 fis, clone NT2RI3003104,
highly similar to Homo sapiens Jumonji, AT rich interactive domain
1B (RBP2-like) (JARID1B), mRNA" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0032453 "histone demethylase activity (H3-K4 specific)"
evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 EMBL:CH471067 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0032453
HOGENOM:HOG000290719 EMBL:AC098934 EMBL:AC104463 UniGene:Hs.443650
HGNC:HGNC:18039 ChiTaRS:KDM5B HOVERGEN:HBG068574 EMBL:AK122752
IPI:IPI00877939 SMR:B3KV94 STRING:B3KV94 Ensembl:ENST00000235790
Uniprot:B3KV94
Length = 1275
Score = 122 (48.0 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 15 CEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVS 58
C +C G + ++LCD C +YH CL P L + P+G W CP+C++
Sbjct: 154 CLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKCLA 200
Score = 119 (46.9 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 24/63 (38%), Positives = 34/63 (53%)
Query: 62 PETASPPAEEVKEKEVLCAKCKSPGDQ--FLLCETCNGSYHPHCLPDPIEGELPTSGWKC 119
P++ S A + V C C S D+ LLC+ C+ SYH CL P+ ++P W+C
Sbjct: 138 PKSRSKKATNAVDLYV-CLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLH-DVPKGDWRC 195
Query: 120 PKC 122
PKC
Sbjct: 196 PKC 198
Score = 94 (38.1 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
Identities = 27/77 (35%), Positives = 36/77 (46%)
Query: 68 PAEEVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDP-IEGELPTSGWKCPKC---S 123
P ++V K LC K +P + CE C ++H C+ P I L W CP C
Sbjct: 1012 PLQDVDIKICLCQK--APAAPMIQCELCRDAFHTSCVAVPSISQGLRI--WLCPHCRRSE 1067
Query: 124 CPPLPGKLEDMASLLRL 140
PPL L +ASL R+
Sbjct: 1068 KPPLEKILPLLASLQRI 1084
Score = 41 (19.5 bits), Expect = 7.3e-08, Sum P(2) = 7.3e-08
Identities = 19/62 (30%), Positives = 25/62 (40%)
Query: 70 EEVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKCSCPPLPG 129
E + + E C KCK+ F+ +C+ C P G L CSCPP
Sbjct: 525 ELLPDDERQCVKCKTTC--FMSAISCS------CKP----GLLVCLHHVKELCSCPPYKY 572
Query: 130 KL 131
KL
Sbjct: 573 KL 574
>UNIPROTKB|Q96BD5 [details] [associations]
symbol:PHF21A "PHD finger protein 21A" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0001967 "suckling behavior"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0000118 "histone deacetylase complex" evidence=IDA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0007596 "blood coagulation" evidence=TAS] Reactome:REACT_604
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR017956
InterPro:IPR019787 Pfam:PF00628 Pfam:PF02178 PROSITE:PS50016
SMART:SM00184 SMART:SM00249 SMART:SM00384 EMBL:CH471064
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0007596
GO:GO:0008270 GO:GO:0001967 GO:GO:0006351 GO:GO:0003682
GO:GO:0016568 GO:GO:0000122 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0000118 EMBL:AY090777 EMBL:AB051483
EMBL:AK021530 EMBL:AK023258 EMBL:BC015714 EMBL:BX648236
EMBL:AF208848 IPI:IPI00041959 IPI:IPI00054460 IPI:IPI00737174
RefSeq:NP_001095272.1 RefSeq:NP_057705.3 UniGene:Hs.502458 PDB:2PUY
PDB:2YQL PDBsum:2PUY PDBsum:2YQL ProteinModelPortal:Q96BD5
SMR:Q96BD5 IntAct:Q96BD5 MINT:MINT-1469147 STRING:Q96BD5
PhosphoSite:Q96BD5 DMDM:74731224 PaxDb:Q96BD5 PRIDE:Q96BD5
DNASU:51317 Ensembl:ENST00000257821 Ensembl:ENST00000323180
Ensembl:ENST00000418153 GeneID:51317 KEGG:hsa:51317 UCSC:uc001ncb.4
UCSC:uc001ncc.4 UCSC:uc001nce.2 CTD:51317 GeneCards:GC11M045950
HGNC:HGNC:24156 HPA:HPA023580 MIM:608325 neXtProt:NX_Q96BD5
PharmGKB:PA134977844 eggNOG:NOG310379 HOVERGEN:HBG080293
InParanoid:Q96BD5 OMA:SCTVNCN OrthoDB:EOG4KWJSH PhylomeDB:Q96BD5
EvolutionaryTrace:Q96BD5 GenomeRNAi:51317 NextBio:54681
ArrayExpress:Q96BD5 Bgee:Q96BD5 CleanEx:HS_PHF21A
Genevestigator:Q96BD5 GermOnline:ENSG00000135365 Uniprot:Q96BD5
Length = 680
Score = 184 (69.8 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 26/46 (56%), Positives = 35/46 (76%)
Query: 11 HQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
H+D+C VC++ G++++CDTC R YHL CLDP L P+G W CPRC
Sbjct: 487 HEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRC 532
Score = 129 (50.5 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 32/97 (32%), Positives = 49/97 (50%)
Query: 26 LCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASPPAEEVKEKEVLCAKCKSP 85
L T P++ H PE ++T E ++ P V P SP + + E C+ C+
Sbjct: 443 LTPTSPQSSHPD--SPENEKT-ETTFTFPAPVQ--PVSLPSPTSTDGDIHEDFCSVCRKS 497
Query: 86 GDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC 122
G Q L+C+TC+ YH CL P++ +P W CP+C
Sbjct: 498 G-QLLMCDTCSRVYHLDCLDPPLK-TIPKGMWICPRC 532
>UNIPROTKB|F1PQV6 [details] [associations]
symbol:PHF21A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR017956 InterPro:IPR019787
Pfam:PF00628 Pfam:PF02178 PROSITE:PS50016 SMART:SM00184
SMART:SM00249 SMART:SM00384 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 OMA:SCTVNCN GeneTree:ENSGT00530000063984
EMBL:AAEX03011503 EMBL:AAEX03011502 Ensembl:ENSCAFT00000014853
Uniprot:F1PQV6
Length = 680
Score = 184 (69.8 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 26/46 (56%), Positives = 35/46 (76%)
Query: 11 HQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
H+D+C VC++ G++++CDTC R YHL CLDP L P+G W CPRC
Sbjct: 487 HEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRC 532
Score = 126 (49.4 bits), Expect = 5.0e-07, P = 5.0e-07
Identities = 32/97 (32%), Positives = 48/97 (49%)
Query: 26 LCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASPPAEEVKEKEVLCAKCKSP 85
L T P + H PE ++T E ++ P V P SP + + E C+ C+
Sbjct: 443 LTPTSPPSSHPD--SPENEKT-ETTFTFPAPVQ--PVSLPSPTSTDGDIHEDFCSVCRKS 497
Query: 86 GDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC 122
G Q L+C+TC+ YH CL P++ +P W CP+C
Sbjct: 498 G-QLLMCDTCSRVYHLDCLDPPLK-TIPKGMWICPRC 532
>UNIPROTKB|Q9UGL1 [details] [associations]
symbol:KDM5B "Lysine-specific demethylase 5B" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003714 "transcription corepressor activity" evidence=IDA]
[GO:0034647 "histone demethylase activity (H3-trimethyl-K4
specific)" evidence=IDA] [GO:0034648 "histone demethylase activity
(H3-dimethyl-K4 specific)" evidence=IDA] [GO:0034720 "histone H3-K4
demethylation" evidence=IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=TAS] [GO:0005634
"nucleus" evidence=TAS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0034721 "histone
H3-K4 demethylation, trimethyl-H3-K4-specific" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0003714 GO:GO:0045892 GO:GO:0005730
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 GO:GO:0034647 KO:K11446
HOGENOM:HOG000290719 HSSP:Q14839 CTD:10765 OrthoDB:EOG4HT8RC
EMBL:AJ132440 EMBL:AF087481 EMBL:AJ243706 EMBL:AC098934
EMBL:AC104463 IPI:IPI00847436 IPI:IPI00873956 RefSeq:NP_006609.3
UniGene:Hs.443650 ProteinModelPortal:Q9UGL1 SMR:Q9UGL1
DIP:DIP-53652N IntAct:Q9UGL1 STRING:Q9UGL1 PhosphoSite:Q9UGL1
DMDM:296439317 PaxDb:Q9UGL1 PRIDE:Q9UGL1 Ensembl:ENST00000367264
Ensembl:ENST00000367265 GeneID:10765 KEGG:hsa:10765 UCSC:uc001gyf.3
UCSC:uc009xag.3 GeneCards:GC01M202696 H-InvDB:HIX0001478
HGNC:HGNC:18039 HPA:HPA027179 MIM:605393 neXtProt:NX_Q9UGL1
PharmGKB:PA164721626 InParanoid:Q9UGL1 OMA:CENEKEM ChiTaRS:KDM5B
GenomeRNAi:10765 NextBio:40877 ArrayExpress:Q9UGL1 Bgee:Q9UGL1
CleanEx:HS_JARID1B Genevestigator:Q9UGL1 Uniprot:Q9UGL1
Length = 1544
Score = 122 (48.0 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 15 CEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVS 58
C +C G + ++LCD C +YH CL P L + P+G W CP+C++
Sbjct: 312 CLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKCLA 358
Score = 119 (46.9 bits), Expect = 7.5e-06, P = 7.5e-06
Identities = 24/63 (38%), Positives = 34/63 (53%)
Query: 62 PETASPPAEEVKEKEVLCAKCKSPGDQ--FLLCETCNGSYHPHCLPDPIEGELPTSGWKC 119
P++ S A + V C C S D+ LLC+ C+ SYH CL P+ ++P W+C
Sbjct: 296 PKSRSKKATNAVDLYV-CLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLH-DVPKGDWRC 353
Query: 120 PKC 122
PKC
Sbjct: 354 PKC 356
Score = 94 (38.1 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
Identities = 27/77 (35%), Positives = 36/77 (46%)
Query: 68 PAEEVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDP-IEGELPTSGWKCPKC---S 123
P ++V K LC K +P + CE C ++H C+ P I L W CP C
Sbjct: 1170 PLQDVDIKICLCQK--APAAPMIQCELCRDAFHTSCVAVPSISQGLRI--WLCPHCRRSE 1225
Query: 124 CPPLPGKLEDMASLLRL 140
PPL L +ASL R+
Sbjct: 1226 KPPLEKILPLLASLQRI 1242
Score = 41 (19.5 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 19/62 (30%), Positives = 25/62 (40%)
Query: 70 EEVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKCSCPPLPG 129
E + + E C KCK+ F+ +C+ C P G L CSCPP
Sbjct: 683 ELLPDDERQCVKCKTTC--FMSAISCS------CKP----GLLVCLHHVKELCSCPPYKY 730
Query: 130 KL 131
KL
Sbjct: 731 KL 732
>ASPGD|ASPL0000065953 [details] [associations]
symbol:AN7300 species:162425 "Emericella nidulans"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0035556 "intracellular signal
transduction" evidence=IEA] InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00249 GO:GO:0046872
GO:GO:0008270 EMBL:BN001304 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 EMBL:AACD01000127 eggNOG:NOG145066
OrthoDB:EOG4N6053 RefSeq:XP_680569.1 ProteinModelPortal:Q5AWN0
EnsemblFungi:CADANIAT00000138 GeneID:2870174 KEGG:ani:AN7300.2
HOGENOM:HOG000168186 OMA:PPEGDWF Uniprot:Q5AWN0
Length = 841
Score = 150 (57.9 bits), Expect = 4.4e-13, Sum P(2) = 4.4e-13
Identities = 23/55 (41%), Positives = 33/55 (60%)
Query: 4 IQDLQTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDET--PEGKWSCPRC 56
+ D E+ D+C C++ G ++ CD C +YH CL+P LD PEG W CP+C
Sbjct: 442 LTDEPAENNDFCRQCEKSGRLLCCDGCVYSYHFSCLNPPLDPANPPEGDWFCPKC 496
Score = 111 (44.1 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 22/55 (40%), Positives = 29/55 (52%)
Query: 70 EEVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSG-WKCPKCS 123
+E E C +C+ G + L C+ C SYH CL P++ P G W CPKCS
Sbjct: 444 DEPAENNDFCRQCEKSG-RLLCCDGCVYSYHFSCLNPPLDPANPPEGDWFCPKCS 497
Score = 59 (25.8 bits), Expect = 4.4e-13, Sum P(2) = 4.4e-13
Identities = 12/41 (29%), Positives = 23/41 (56%)
Query: 71 EVKEKEVLCAKC--KSPGDQFLL-CETCNGSYHPHCLPDPI 108
+ K K ++C KC + G + ++ C+ C ++H CL P+
Sbjct: 570 DAKGKLIVCVKCGQTTNGRRPIIQCDFCPCAFHMDCLDPPL 610
Score = 39 (18.8 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 10/18 (55%), Positives = 13/18 (72%)
Query: 129 GKLEDMASLLRL-PRQHR 145
GK E++ASL R+ PR R
Sbjct: 536 GKYEEVASLPRINPRAAR 553
Score = 34 (17.0 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 6/16 (37%), Positives = 8/16 (50%)
Query: 59 DGPPETASPPAEEVKE 74
D PP +P E+ E
Sbjct: 164 DSPPTLLTPAEEQAPE 179
>UNIPROTKB|F1NP02 [details] [associations]
symbol:PHF21A "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR017956 InterPro:IPR019787
Pfam:PF00628 Pfam:PF02178 PROSITE:PS50016 SMART:SM00184
SMART:SM00249 SMART:SM00384 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GeneTree:ENSGT00530000063984 EMBL:AADN02033506
EMBL:AADN02033505 IPI:IPI00680686 Ensembl:ENSGALT00000030514
ArrayExpress:F1NP02 Uniprot:F1NP02
Length = 603
Score = 181 (68.8 bits), Expect = 5.2e-13, P = 5.2e-13
Identities = 25/46 (54%), Positives = 35/46 (76%)
Query: 11 HQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
H+D+C VC++ G++++CDTC R YHL CLDP L P+G W CP+C
Sbjct: 411 HEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPKC 456
Score = 131 (51.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 29/82 (35%), Positives = 43/82 (52%)
Query: 41 PELDETPEGKWSCPRCVSDGPPETASPPAEEVKEKEVLCAKCKSPGDQFLLCETCNGSYH 100
PE ++T E ++ P V P SP + + E C+ C+ G Q L+C+TC+ YH
Sbjct: 380 PENEKT-ETTFTFPAAVQ--PVSLPSPSSTDGDIHEDFCSVCRKSG-QLLMCDTCSRVYH 435
Query: 101 PHCLPDPIEGELPTSGWKCPKC 122
CL P++ +P W CPKC
Sbjct: 436 LDCLDPPLK-TIPKGMWICPKC 456
>UNIPROTKB|C9J9G2 [details] [associations]
symbol:PHF12 "PHD finger protein 12" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:AC024267 HGNC:HGNC:20816
HOGENOM:HOG000220810 ChiTaRS:PHF12 IPI:IPI00952567
ProteinModelPortal:C9J9G2 STRING:C9J9G2 Ensembl:ENST00000378879
UCSC:uc002hdh.1 ArrayExpress:C9J9G2 Uniprot:C9J9G2
Length = 705
Score = 146 (56.5 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 24/50 (48%), Positives = 33/50 (66%)
Query: 9 TEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDET--PEGKWSCPRC 56
T H D C+ C++GG+++ CD CP A+HL C +P L E P G+W C RC
Sbjct: 54 TNH-DSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRC 102
Score = 102 (41.0 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 17/43 (39%), Positives = 23/43 (53%)
Query: 15 CEVCQQG---GEIILCDTCPRAYHLCCLDPELDETPEGKWSCP 54
C C + +I CD CP +H+ CL+P L P G+W CP
Sbjct: 274 CFTCNRSCRVAPLIQCDYCPLLFHMDCLEPPLTAMPLGRWMCP 316
Score = 65 (27.9 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 25/96 (26%), Positives = 38/96 (39%)
Query: 44 DETPEGKW---SCPRCVSDGPPETASPPAEEVKEKEVLCAKCKSPGDQFLLCETCNGSYH 100
D+TP SCP +S + SPP + +++ C+ C + C T NG +
Sbjct: 484 DKTPTPSHYPLSCPSGISTQNSLSCSPPHQSPALEDIGCSSCAEKSKK-TPCGTANGPVN 542
Query: 101 -------PHCLPDPIEGELPTSGWKCPKCSCPPLPG 129
PH P + P + P + P LPG
Sbjct: 543 TEVKANGPHLYSSPTDSTDPR---RLPGANTP-LPG 574
Score = 60 (26.2 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 92 CETCNGSYHPHCLPDPIEGELPTSGWKCP 120
C+ C +H CL P+ +P W CP
Sbjct: 289 CDYCPLLFHMDCLEPPLTA-MPLGRWMCP 316
Score = 36 (17.7 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 9/32 (28%), Positives = 14/32 (43%)
Query: 97 GSYHPHCLPDPIEGELPTSGWKCPKCSCPPLP 128
G H + ++ E T CP+ S P+P
Sbjct: 591 GGLQNHTVGIIVKTENATGPSSCPQRSLVPVP 622
>UNIPROTKB|F1P5P6 [details] [associations]
symbol:PHF21A "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR017956 InterPro:IPR019787
Pfam:PF00628 Pfam:PF02178 PROSITE:PS50016 SMART:SM00184
SMART:SM00249 SMART:SM00384 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003682 GO:GO:0000122 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0000118
GeneTree:ENSGT00530000063984 EMBL:AADN02033506 EMBL:AADN02033505
IPI:IPI00574652 Ensembl:ENSGALT00000013689 ArrayExpress:F1P5P6
Uniprot:F1P5P6
Length = 651
Score = 181 (68.8 bits), Expect = 5.9e-13, P = 5.9e-13
Identities = 25/46 (54%), Positives = 35/46 (76%)
Query: 11 HQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
H+D+C VC++ G++++CDTC R YHL CLDP L P+G W CP+C
Sbjct: 459 HEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPKC 504
Score = 131 (51.2 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 29/82 (35%), Positives = 43/82 (52%)
Query: 41 PELDETPEGKWSCPRCVSDGPPETASPPAEEVKEKEVLCAKCKSPGDQFLLCETCNGSYH 100
PE ++T E ++ P V P SP + + E C+ C+ G Q L+C+TC+ YH
Sbjct: 428 PENEKT-ETTFTFPAAVQ--PVSLPSPSSTDGDIHEDFCSVCRKSG-QLLMCDTCSRVYH 483
Query: 101 PHCLPDPIEGELPTSGWKCPKC 122
CL P++ +P W CPKC
Sbjct: 484 LDCLDPPLK-TIPKGMWICPKC 504
>UNIPROTKB|F1M5S0 [details] [associations]
symbol:RGD1560612 "Protein RGD1560612" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GeneTree:ENSGT00530000063984 IPI:IPI00947688
Ensembl:ENSRNOT00000066219 ArrayExpress:F1M5S0 Uniprot:F1M5S0
Length = 573
Score = 180 (68.4 bits), Expect = 6.1e-13, P = 6.1e-13
Identities = 25/46 (54%), Positives = 35/46 (76%)
Query: 11 HQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
H+D+C VC++ G++++CDTC R YHL CL+P L P+G W CPRC
Sbjct: 381 HEDFCSVCRKSGQLLMCDTCSRVYHLDCLEPPLKTIPKGMWICPRC 426
Score = 119 (46.9 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 22/62 (35%), Positives = 33/62 (53%)
Query: 61 PPETASPPAEEVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCP 120
P SP + + E C+ C+ G Q L+C+TC+ YH CL P++ +P W CP
Sbjct: 367 PVSLPSPTSTDGDIHEDFCSVCRKSG-QLLMCDTCSRVYHLDCLEPPLK-TIPKGMWICP 424
Query: 121 KC 122
+C
Sbjct: 425 RC 426
>RGD|1560612 [details] [associations]
symbol:Phf21a "PHD finger protein 21A" species:10116 "Rattus
norvegicus" [GO:0000118 "histone deacetylase complex"
evidence=IEA;ISO] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0001967
"suckling behavior" evidence=IEA;ISO] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR017956 InterPro:IPR019787 Pfam:PF00628 Pfam:PF02178
PROSITE:PS50016 SMART:SM00184 SMART:SM00249 SMART:SM00384
RGD:1560612 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
GeneTree:ENSGT00530000063984 IPI:IPI00952132
Ensembl:ENSRNOT00000067664 UCSC:RGD:1560612 ArrayExpress:F1M6K4
Uniprot:F1M6K4
Length = 639
Score = 180 (68.4 bits), Expect = 7.4e-13, P = 7.4e-13
Identities = 25/46 (54%), Positives = 35/46 (76%)
Query: 11 HQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
H+D+C VC++ G++++CDTC R YHL CL+P L P+G W CPRC
Sbjct: 447 HEDFCSVCRKSGQLLMCDTCSRVYHLDCLEPPLKTIPKGMWICPRC 492
Score = 126 (49.4 bits), Expect = 4.6e-07, P = 4.6e-07
Identities = 32/97 (32%), Positives = 48/97 (49%)
Query: 26 LCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASPPAEEVKEKEVLCAKCKSP 85
L T P + H PE ++T E ++ P V P SP + + E C+ C+
Sbjct: 403 LTPTSPPSSHPD--SPENEKT-ETTFTFPAPVQ--PVSLPSPTSTDGDIHEDFCSVCRKS 457
Query: 86 GDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC 122
G Q L+C+TC+ YH CL P++ +P W CP+C
Sbjct: 458 G-QLLMCDTCSRVYHLDCLEPPLK-TIPKGMWICPRC 492
>MGI|MGI:2384756 [details] [associations]
symbol:Phf21a "PHD finger protein 21A" species:10090 "Mus
musculus" [GO:0000118 "histone deacetylase complex" evidence=ISO]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0001967 "suckling
behavior" evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR017956 InterPro:IPR019787
Pfam:PF00628 Pfam:PF02178 PROSITE:PS50016 SMART:SM00184
SMART:SM00249 SMART:SM00384 MGI:MGI:2384756 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0001967 GO:GO:0006351 GO:GO:0003682 GO:GO:0016568
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 CTD:51317
eggNOG:NOG310379 HOVERGEN:HBG080293 EMBL:AB105178 EMBL:AK129424
EMBL:AK037174 EMBL:BC019181 EMBL:AY206982 IPI:IPI00124469
IPI:IPI00228265 IPI:IPI00453806 IPI:IPI00742280 IPI:IPI00742299
IPI:IPI00742330 IPI:IPI00742344 IPI:IPI00742352 IPI:IPI00742439
RefSeq:NP_001103161.1 RefSeq:NP_620094.2 UniGene:Mm.330408
ProteinModelPortal:Q6ZPK0 SMR:Q6ZPK0 STRING:Q6ZPK0
PhosphoSite:Q6ZPK0 PRIDE:Q6ZPK0 GeneID:192285 KEGG:mmu:192285
UCSC:uc008kxi.2 HOGENOM:HOG000231466 ChiTaRS:PHF21A NextBio:371282
CleanEx:MM_PHF21A Genevestigator:Q6ZPK0
GermOnline:ENSMUSG00000058318 Uniprot:Q6ZPK0
Length = 659
Score = 180 (68.4 bits), Expect = 7.7e-13, P = 7.7e-13
Identities = 25/46 (54%), Positives = 35/46 (76%)
Query: 11 HQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
H+D+C VC++ G++++CDTC R YHL CL+P L P+G W CPRC
Sbjct: 467 HEDFCSVCRKSGQLLMCDTCSRVYHLDCLEPPLKTIPKGMWICPRC 512
Score = 126 (49.4 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 32/97 (32%), Positives = 48/97 (49%)
Query: 26 LCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASPPAEEVKEKEVLCAKCKSP 85
L T P + H PE ++T E ++ P V P SP + + E C+ C+
Sbjct: 423 LTPTSPPSSHPD--SPENEKT-ETTFTFPAPVQ--PVSLPSPTSTDGDIHEDFCSVCRKS 477
Query: 86 GDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC 122
G Q L+C+TC+ YH CL P++ +P W CP+C
Sbjct: 478 G-QLLMCDTCSRVYHLDCLEPPLK-TIPKGMWICPRC 512
>TAIR|locus:2162509 [details] [associations]
symbol:AT5G22760 "AT5G22760" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009630 "gravitropism" evidence=RCA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 Prosite:PS00018 EMBL:CP002688 GO:GO:0046872
GO:GO:0008270 InterPro:IPR018247 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR004022
InterPro:IPR018500 InterPro:IPR018501 Pfam:PF02791 SMART:SM00571
PROSITE:PS50827 IPI:IPI00532034 RefSeq:NP_197668.2 UniGene:At.43647
PRIDE:F4KBB1 EnsemblPlants:AT5G22760.1 GeneID:832339
KEGG:ath:AT5G22760 OMA:SHFPSIV Uniprot:F4KBB1
Length = 1566
Score = 117 (46.2 bits), Expect = 8.0e-13, Sum P(2) = 8.0e-13
Identities = 20/51 (39%), Positives = 26/51 (50%)
Query: 6 DLQTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
DL + D C +C G ++ CD CP AYH C+ P+G W CP C
Sbjct: 408 DLDA-NSDECRLCGMDGTLLCCDGCPLAYHSRCIGVVKMYIPDGPWYCPEC 457
Score = 96 (38.9 bits), Expect = 8.0e-13, Sum P(2) = 8.0e-13
Identities = 19/51 (37%), Positives = 24/51 (47%)
Query: 74 EKEVLCAKCK--SPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC 122
E + C CK PG L C+TCN + H HC P E W+C +C
Sbjct: 1513 ENTIPCQICKHVEPGPD-LTCQTCNMTIHSHCSPWEEESTCIGGSWRCGRC 1562
Score = 66 (28.3 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 19/70 (27%), Positives = 34/70 (48%)
Query: 78 LCAKCK---SPGDQFLLCETCNGSYHPHCLPDPIEGELP-TSGWKCPKC------SCPPL 127
+C CK +PG ++ C +C+ YH + E ++P G+KC +C CP +
Sbjct: 1244 VCWICKLPYNPGLTYIHCTSCDMWYHIEAVKLE-ESKIPEVVGFKCCRCRRIRSPDCPYM 1302
Query: 128 PGKLEDMASL 137
KL++ +
Sbjct: 1303 DPKLKEQKQM 1312
Score = 57 (25.1 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 23/84 (27%), Positives = 35/84 (41%)
Query: 8 QTEHQDYCEVCQ----QGGEIILCDTCPRAYHLCCLDPELDETPEGK-WSCPRCVSDGPP 62
Q Q C +C+ G I C +C YH+ + E + PE + C RC P
Sbjct: 1238 QPNLQPVCWICKLPYNPGLTYIHCTSCDMWYHIEAVKLEESKIPEVVGFKCCRCRRIRSP 1297
Query: 63 ETA--SPPAEEVKE-KEVLCAKCK 83
+ P +E K+ K+V + K
Sbjct: 1298 DCPYMDPKLKEQKQMKQVFFRRQK 1321
Score = 47 (21.6 bits), Expect = 9.1e-08, Sum P(2) = 9.1e-08
Identities = 12/29 (41%), Positives = 12/29 (41%)
Query: 79 CAKCKSPGDQFL----LCETCNGSYHPHC 103
CA C D FL C TC G H C
Sbjct: 1085 CASCHL--DVFLRDSITCSTCQGFCHKEC 1111
>ZFIN|ZDB-GENE-030131-6456 [details] [associations]
symbol:phf21ab "PHD finger protein 21Ab"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0060324
"face development" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR017956 InterPro:IPR019787 Pfam:PF00628 Pfam:PF02178
PROSITE:PS50016 SMART:SM00184 SMART:SM00249 SMART:SM00384
ZFIN:ZDB-GENE-030131-6456 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0060324
GeneTree:ENSGT00530000063984 EMBL:BX088562 IPI:IPI00499307
UniGene:Dr.80349 Ensembl:ENSDART00000021577 NextBio:20885937
Bgee:E7F750 Uniprot:E7F750
Length = 796
Score = 181 (68.8 bits), Expect = 8.0e-13, P = 8.0e-13
Identities = 25/46 (54%), Positives = 35/46 (76%)
Query: 11 HQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
H+D+C VC++ G++++CDTC R YHL CLDP L P+G W CP+C
Sbjct: 460 HEDFCTVCRRSGQLLMCDTCSRVYHLDCLDPPLKNIPKGMWICPKC 505
Score = 117 (46.2 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 22/57 (38%), Positives = 31/57 (54%)
Query: 66 SPPAEEVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC 122
SP + + E C C+ G Q L+C+TC+ YH CL P++ +P W CPKC
Sbjct: 451 SPSSGDGDIHEDFCTVCRRSG-QLLMCDTCSRVYHLDCLDPPLKN-IPKGMWICPKC 505
>UNIPROTKB|Q2TAK2 [details] [associations]
symbol:PHF12 "PHF12 protein" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 EMBL:AC024267 UniGene:Hs.444173 HGNC:HGNC:20816
HOVERGEN:HBG057884 ChiTaRS:PHF12 IPI:IPI00952567 EMBL:BC110882
ProteinModelPortal:Q2TAK2 SMR:Q2TAK2 STRING:Q2TAK2
Ensembl:ENST00000577226 UCSC:uc002hdi.1 Bgee:Q2TAK2 Uniprot:Q2TAK2
Length = 849
Score = 146 (56.5 bits), Expect = 9.4e-13, Sum P(2) = 9.4e-13
Identities = 24/50 (48%), Positives = 33/50 (66%)
Query: 9 TEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDET--PEGKWSCPRC 56
T H D C+ C++GG+++ CD CP A+HL C +P L E P G+W C RC
Sbjct: 54 TNH-DSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRC 102
Score = 102 (41.0 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 17/43 (39%), Positives = 23/43 (53%)
Query: 15 CEVCQQG---GEIILCDTCPRAYHLCCLDPELDETPEGKWSCP 54
C C + +I CD CP +H+ CL+P L P G+W CP
Sbjct: 274 CFTCNRSCRVAPLIQCDYCPLLFHMDCLEPPLTAMPLGRWMCP 316
Score = 65 (27.9 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 25/96 (26%), Positives = 38/96 (39%)
Query: 44 DETPEGKW---SCPRCVSDGPPETASPPAEEVKEKEVLCAKCKSPGDQFLLCETCNGSYH 100
D+TP SCP +S + SPP + +++ C+ C + C T NG +
Sbjct: 484 DKTPTPSHYPLSCPSGISTQNSLSCSPPHQSPALEDIGCSSCAEKSKK-TPCGTANGPVN 542
Query: 101 -------PHCLPDPIEGELPTSGWKCPKCSCPPLPG 129
PH P + P + P + P LPG
Sbjct: 543 TEVKANGPHLYSSPTDSTDPR---RLPGANTP-LPG 574
Score = 60 (26.2 bits), Expect = 9.4e-13, Sum P(2) = 9.4e-13
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 92 CETCNGSYHPHCLPDPIEGELPTSGWKCP 120
C+ C +H CL P+ +P W CP
Sbjct: 289 CDYCPLLFHMDCLEPPLTA-MPLGRWMCP 316
Score = 36 (17.7 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 9/32 (28%), Positives = 14/32 (43%)
Query: 97 GSYHPHCLPDPIEGELPTSGWKCPKCSCPPLP 128
G H + ++ E T CP+ S P+P
Sbjct: 591 GGLQNHTVGIIVKTENATGPSSCPQRSLVPVP 622
>FB|FBgn0023395 [details] [associations]
symbol:Chd3 "Chd3" species:7227 "Drosophila melanogaster"
[GO:0006333 "chromatin assembly or disassembly" evidence=ISS;NAS]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0004386 "helicase
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 EMBL:AE014296 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0006333
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 PROSITE:PS00598 GeneTree:ENSGT00560000076896
InterPro:IPR009463 Pfam:PF06465 EMBL:AY071503 EMBL:AF007780
RefSeq:NP_649111.1 ProteinModelPortal:O16102 SMR:O16102
DIP:DIP-21327N MINT:MINT-1651376 STRING:O16102 PaxDb:O16102
EnsemblMetazoa:FBtr0074998 GeneID:40111 KEGG:dme:Dmel_CG9594
UCSC:CG9594-RA CTD:1107 FlyBase:FBgn0023395 InParanoid:O16102
OMA:IKWRDLA OrthoDB:EOG4JH9WN PhylomeDB:O16102 GenomeRNAi:40111
NextBio:817050 Bgee:O16102 GermOnline:CG9594 Uniprot:O16102
Length = 892
Score = 170 (64.9 bits), Expect = 9.7e-13, Sum P(2) = 9.7e-13
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 12 QDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCV 57
++YC+VC GG+++ CD+CP YH CL P L P+G W CPRC+
Sbjct: 35 EEYCKVCSDGGDLLCCDSCPSVYHRTCLSPPLKSIPKGDWICPRCI 80
Score = 138 (53.6 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 30/87 (34%), Positives = 45/87 (51%)
Query: 51 WSCP-RCVSDGPPETASPPAEEVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIE 109
W P + D P+T + ++ +++E C C GD L C++C YH CL P++
Sbjct: 11 WKTPGKASKDKRPKT-NAKKQKFRDEEY-CKVCSDGGD-LLCCDSCPSVYHRTCLSPPLK 67
Query: 110 GELPTSGWKCPKCSCPPLPGKLEDMAS 136
+P W CP+C PLPGK E + S
Sbjct: 68 S-IPKGDWICPRCI--PLPGKAEKILS 91
Score = 36 (17.7 bits), Expect = 9.7e-13, Sum P(2) = 9.7e-13
Identities = 12/49 (24%), Positives = 20/49 (40%)
Query: 91 LCETCNGSYHPHCLPDPIEGELPTSGWKCPKCSCPPLPGKLEDMASLLR 139
L + CN HP+ P E + S GKL+ ++ +L+
Sbjct: 551 LRKCCN---HPYLFPSAAEEATISPSGLYEMSSLTKASGKLDLLSKMLK 596
>ZFIN|ZDB-GENE-030131-5913 [details] [associations]
symbol:trim24 "tripartite motif-containing 24"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 Prosite:PS00518
ZFIN:ZDB-GENE-030131-5913 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR017907 Gene3D:1.20.920.10 SUPFAM:SSF47370 EMBL:AY598454
IPI:IPI00483547 UniGene:Dr.16482 ProteinModelPortal:Q6E2N2
SMR:Q6E2N2 HOVERGEN:HBG097569 ArrayExpress:Q6E2N2 Uniprot:Q6E2N2
Length = 961
Score = 160 (61.4 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 25/53 (47%), Positives = 33/53 (62%)
Query: 11 HQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPE 63
++D+C VCQ GGE+I CD CP+ +HL C P L +P G+W C C PE
Sbjct: 696 NEDWCAVCQNGGELICCDKCPKVFHLSCHVPSLTASPSGEWYCTLCRDLNSPE 748
Score = 46 (21.3 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 8/14 (57%), Positives = 12/14 (85%)
Query: 63 ETASPPAEEVKEKE 76
ETA PPAE++ ++E
Sbjct: 912 ETARPPAEDLPQEE 925
>UNIPROTKB|I3LQA6 [details] [associations]
symbol:AIRE "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006959 "humoral
immune response" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0045182 "translation regulator activity"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000770
InterPro:IPR001965 InterPro:IPR004865 InterPro:IPR008087
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01342 Pfam:PF03172
PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS50864 PROSITE:PS51414
SMART:SM00184 SMART:SM00249 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 GO:GO:0006417 GO:GO:0046872 GO:GO:0015629
GO:GO:0008270 GO:GO:0045944 GO:GO:0003682 GO:GO:0045182
GO:GO:0044212 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 OMA:NDDECAV GO:GO:0006959 Gene3D:3.10.390.10
InterPro:IPR010919 SUPFAM:SSF63763 GeneTree:ENSGT00440000034278
EMBL:FP312783 Ensembl:ENSSSCT00000030488 Uniprot:I3LQA6
Length = 564
Score = 177 (67.4 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 35/84 (41%), Positives = 46/84 (54%)
Query: 10 EHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVS-----DGPPET 64
+++D C VC+ GGE+I CD CPRA+HL CL P L + P G W C C+ D P
Sbjct: 302 KNEDECAVCRDGGELICCDGCPRAFHLACLSPPLRDIPSGTWRCSSCLQGRSQQDLPRAE 361
Query: 65 ASPPAEEVKEKEVLCAKCKSPGDQ 88
A P E E VL +S G++
Sbjct: 362 APRPQEPPAETPVLLG-LRSAGEE 384
Score = 107 (42.7 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 19/62 (30%), Positives = 32/62 (51%)
Query: 61 PPETASPPAEEVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCP 120
PP S P K ++ CA C+ G + + C+ C ++H CL P+ ++P+ W+C
Sbjct: 290 PPALPSEPQPHQKNEDE-CAVCRD-GGELICCDGCPRAFHLACLSPPLR-DIPSGTWRCS 346
Query: 121 KC 122
C
Sbjct: 347 SC 348
>UNIPROTKB|Q96QT6 [details] [associations]
symbol:PHF12 "PHD finger protein 12" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0001222
"transcription corepressor binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0017053 "transcriptional repressor complex" evidence=IDA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0035091 "phosphatidylinositol binding"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0001106 "RNA
polymerase II transcription corepressor activity" evidence=IDA]
[GO:0016580 "Sin3 complex" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000253 InterPro:IPR001965
InterPro:IPR008984 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50006
PROSITE:PS50016 SMART:SM00249 GO:GO:0017053 GO:GO:0046872
GO:GO:0008270 Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0035091 EMBL:CH471159
GO:GO:0001106 GO:GO:0016580 PDB:2LKM PDBsum:2LKM EMBL:AY030283
EMBL:AK024290 EMBL:AK160370 EMBL:BC001657 EMBL:BC121044
EMBL:AB040956 IPI:IPI00290033 IPI:IPI00292750 IPI:IPI00441976
IPI:IPI00607816 RefSeq:NP_001028733.1 RefSeq:NP_065940.1
UniGene:Hs.444173 PDB:2L9S PDBsum:2L9S ProteinModelPortal:Q96QT6
SMR:Q96QT6 DIP:DIP-59632N IntAct:Q96QT6 STRING:Q96QT6
PhosphoSite:Q96QT6 DMDM:71153050 PaxDb:Q96QT6 PRIDE:Q96QT6
Ensembl:ENST00000268756 Ensembl:ENST00000332830 GeneID:57649
KEGG:hsa:57649 UCSC:uc002hdg.1 UCSC:uc002hdj.1 CTD:57649
GeneCards:GC17M027232 H-InvDB:HIX0202392 HGNC:HGNC:20816
HPA:HPA021410 neXtProt:NX_Q96QT6 PharmGKB:PA134954478
eggNOG:NOG145066 HOGENOM:HOG000220810 HOVERGEN:HBG057884
InParanoid:Q96QT6 OMA:MSSQAQG OrthoDB:EOG4VHK63 ChiTaRS:PHF12
EvolutionaryTrace:Q96QT6 GenomeRNAi:57649 NextBio:64390
ArrayExpress:Q96QT6 Bgee:Q96QT6 CleanEx:HS_PHF12
Genevestigator:Q96QT6 GermOnline:ENSG00000109118 Uniprot:Q96QT6
Length = 1004
Score = 146 (56.5 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 24/50 (48%), Positives = 33/50 (66%)
Query: 9 TEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDET--PEGKWSCPRC 56
T H D C+ C++GG+++ CD CP A+HL C +P L E P G+W C RC
Sbjct: 54 TNH-DSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRC 102
Score = 102 (41.0 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 17/43 (39%), Positives = 23/43 (53%)
Query: 15 CEVCQQG---GEIILCDTCPRAYHLCCLDPELDETPEGKWSCP 54
C C + +I CD CP +H+ CL+P L P G+W CP
Sbjct: 274 CFTCNRSCRVAPLIQCDYCPLLFHMDCLEPPLTAMPLGRWMCP 316
Score = 65 (27.9 bits), Expect = 5.6e-07, Sum P(2) = 5.6e-07
Identities = 25/96 (26%), Positives = 38/96 (39%)
Query: 44 DETPEGKW---SCPRCVSDGPPETASPPAEEVKEKEVLCAKCKSPGDQFLLCETCNGSYH 100
D+TP SCP +S + SPP + +++ C+ C + C T NG +
Sbjct: 484 DKTPTPSHYPLSCPSGISTQNSLSCSPPHQSPALEDIGCSSCAEKSKK-TPCGTANGPVN 542
Query: 101 -------PHCLPDPIEGELPTSGWKCPKCSCPPLPG 129
PH P + P + P + P LPG
Sbjct: 543 TEVKANGPHLYSSPTDSTDPR---RLPGANTP-LPG 574
Score = 60 (26.2 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 92 CETCNGSYHPHCLPDPIEGELPTSGWKCP 120
C+ C +H CL P+ +P W CP
Sbjct: 289 CDYCPLLFHMDCLEPPLTA-MPLGRWMCP 316
Score = 36 (17.7 bits), Expect = 4.3e-10, Sum P(2) = 4.3e-10
Identities = 9/32 (28%), Positives = 14/32 (43%)
Query: 97 GSYHPHCLPDPIEGELPTSGWKCPKCSCPPLP 128
G H + ++ E T CP+ S P+P
Sbjct: 591 GGLQNHTVGIIVKTENATGPSSCPQRSLVPVP 622
>UNIPROTKB|F1NX04 [details] [associations]
symbol:PHF12 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0001106
"RNA polymerase II transcription corepressor activity"
evidence=IEA] [GO:0001222 "transcription corepressor binding"
evidence=IEA] [GO:0016580 "Sin3 complex" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=IEA] [GO:0035091
"phosphatidylinositol binding" evidence=IEA] InterPro:IPR000253
InterPro:IPR001965 InterPro:IPR008984 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50006 PROSITE:PS50016 SMART:SM00240
SMART:SM00249 GO:GO:0017053 GO:GO:0046872 GO:GO:0008270
Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0035091 GO:GO:0001106
GO:GO:0016580 OMA:MSSQAQG GeneTree:ENSGT00440000033777
EMBL:AADN02025853 IPI:IPI00589363 Ensembl:ENSGALT00000006417
Uniprot:F1NX04
Length = 1007
Score = 146 (56.5 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 24/50 (48%), Positives = 33/50 (66%)
Query: 9 TEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDET--PEGKWSCPRC 56
T H D C+ C++GG+++ CD CP A+HL C +P L E P G+W C RC
Sbjct: 52 TNH-DSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRC 100
Score = 102 (41.0 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 17/43 (39%), Positives = 23/43 (53%)
Query: 15 CEVCQQG---GEIILCDTCPRAYHLCCLDPELDETPEGKWSCP 54
C C + +I CD CP +H+ CL+P L P G+W CP
Sbjct: 270 CFTCNRSCRVAPLIQCDYCPLLFHMDCLEPPLTAMPLGRWMCP 312
Score = 60 (26.2 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 92 CETCNGSYHPHCLPDPIEGELPTSGWKCP 120
C+ C +H CL P+ +P W CP
Sbjct: 285 CDYCPLLFHMDCLEPPLTA-MPLGRWMCP 312
Score = 48 (22.0 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 10/46 (21%), Positives = 21/46 (45%)
Query: 52 SCPRCVSDGPPETASPPAEEVKEKEVLCAKCKSPGDQFLLCETCNG 97
SC ++ ++S + + +++V C+ C + C T NG
Sbjct: 493 SCTSGITTQNSLSSSQSQQTLSQEDVNCSSCLDKSKKVSSCGTSNG 538
>ZFIN|ZDB-GENE-030424-1 [details] [associations]
symbol:kdm5bb "lysine (K)-specific demethylase 5Bb"
species:7955 "Danio rerio" [GO:0016706 "oxidoreductase activity,
acting on paired donors, with incorporation or reduction of
molecular oxygen, 2-oxoglutarate as one donor, and incorporation of
one atom each of oxygen into both donors" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0034648 "histone demethylase activity
(H3-dimethyl-K4 specific)" evidence=ISS] [GO:0034720 "histone H3-K4
demethylation" evidence=ISS] [GO:0034647 "histone demethylase
activity (H3-trimethyl-K4 specific)" evidence=ISS] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 ZFIN:ZDB-GENE-030424-1 GO:GO:0005634
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 EMBL:CABZ01042196 EMBL:BX664742
Ensembl:ENSDART00000005583 Bgee:G1K2I1 Uniprot:G1K2I1
Length = 1522
Score = 126 (49.4 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 15 CEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVS 58
C VC +G + ++LCD C +YH CL P L + P+G W CP+C++
Sbjct: 317 CLVCGKGNDEDRLLLCDGCDDSYHTFCLIPPLTDVPKGDWRCPKCLT 363
Score = 117 (46.2 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 31/83 (37%), Positives = 42/83 (50%)
Query: 42 ELDE-TPEGKWSCPRCVSDGPPETASPPAEEVKEKEVL-CAKCKSPGDQFLLCETCNGSY 99
E+ E PE + S P+ + PP PP V L C K D+ LLC+ C+ SY
Sbjct: 286 EIKELNPEPEKSKPK-KKNIPP----PPVSMVDLYVCLVCGKGNDE-DRLLLCDGCDDSY 339
Query: 100 HPHCLPDPIEGELPTSGWKCPKC 122
H CL P+ ++P W+CPKC
Sbjct: 340 HTFCLIPPLT-DVPKGDWRCPKC 361
Score = 84 (34.6 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 21/66 (31%), Positives = 31/66 (46%)
Query: 78 LCAKCKSPG-DQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC---SCPPLPGKLED 133
+C C+ P L CE C ++H C+ P + L W CP C + PPL K+
Sbjct: 1189 VCV-CQKPAMGAMLQCELCRDAFHSVCVRGPSD-PLDPEAWLCPLCLRSTKPPLD-KIRS 1245
Query: 134 MASLLR 139
+ S L+
Sbjct: 1246 LLSSLQ 1251
Score = 59 (25.8 bits), Expect = 5.8e-10, Sum P(2) = 5.8e-10
Identities = 17/61 (27%), Positives = 29/61 (47%)
Query: 69 AEEVKEKEVLCA--KCKSP-GDQ--FLLCETCNGSYHPHCLPDPIEGELPTS-GWKCPKC 122
+E+ +E LC C P G++ ++ C+ CN +H C+ + EL + C C
Sbjct: 1456 SEDSEEDMTLCPAESCLQPEGEEVDWVQCDCCNRWFHMICVG--VSAELAAEEDYMCVSC 1513
Query: 123 S 123
S
Sbjct: 1514 S 1514
>ZFIN|ZDB-GENE-030131-3876 [details] [associations]
symbol:phf12a "PHD finger protein 12a"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000253 InterPro:IPR001965 InterPro:IPR008984
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50006 PROSITE:PS50016
SMART:SM00249 ZFIN:ZDB-GENE-030131-3876 GO:GO:0046872 GO:GO:0008270
Gene3D:2.60.200.20 SUPFAM:SSF49879 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GeneTree:ENSGT00440000033777
EMBL:CU694807 IPI:IPI00897047 RefSeq:XP_001919955.3
UniGene:Dr.79049 Ensembl:ENSDART00000111104 GeneID:562152
KEGG:dre:562152 CTD:562152 NextBio:20884273 Uniprot:E7EXI6
Length = 941
Score = 141 (54.7 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 23/50 (46%), Positives = 31/50 (62%)
Query: 9 TEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDET--PEGKWSCPRC 56
T H D C+ C++GG+++ CD CP A+HL C +P L P G W C RC
Sbjct: 54 TNH-DICDSCREGGDLLCCDHCPAAFHLQCCNPPLSREMLPSGDWMCHRC 102
Score = 109 (43.4 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 18/48 (37%), Positives = 25/48 (52%)
Query: 15 CEVCQQG---GEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSD 59
C C + +I CD CP +H+ CLDP L P G+W CP + +
Sbjct: 285 CYTCSRSCRLAPLIQCDFCPLLFHMDCLDPPLTAFPTGRWMCPNHIQN 332
Score = 64 (27.6 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 92 CETCNGSYHPHCLPDPIEGELPTSGWKCP 120
C+ C +H CL P+ PT W CP
Sbjct: 300 CDFCPLLFHMDCLDPPLTA-FPTGRWMCP 327
Score = 46 (21.3 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 17/53 (32%), Positives = 22/53 (41%)
Query: 52 SCPRCVSDGPPETASPPAEEVKEKEVLCAKCKS---PGDQFLLCETCNGSYHP 101
SC S G + +SP E LC CK+ P DQ + NG+ P
Sbjct: 476 SCQSAASQGS-QNSSPKVPCSSCTEGLCQNCKTTNGPVDQSI---QSNGTQDP 524
Score = 37 (18.1 bits), Expect = 9.7e-10, Sum P(2) = 9.7e-10
Identities = 13/62 (20%), Positives = 23/62 (37%)
Query: 67 PPAEEVKEKEVL-CAKCKSPGDQFLLCETCNGSY--HPHCL-PDPIEGELPTSGWKCPKC 122
PPA E C K+P + + + H + P + + ++G + P
Sbjct: 571 PPAHVKSEPRTQPCDHAKTPPASDAAAKVSDSTVCTGAHAVKPQKVTSDAGSNGQRSPSS 630
Query: 123 SC 124
SC
Sbjct: 631 SC 632
>UNIPROTKB|F1NW66 [details] [associations]
symbol:Gga.49064 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0035097 "histone methyltransferase complex" evidence=IEA]
[GO:0042800 "histone methyltransferase activity (H3-K4 specific)"
evidence=IEA] InterPro:IPR001841 Pfam:PF00856 InterPro:IPR009071
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR003888
InterPro:IPR003889 InterPro:IPR019787 Pfam:PF00628 Pfam:PF05964
Pfam:PF05965 PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51542
PROSITE:PS51543 SMART:SM00184 SMART:SM00249 SMART:SM00317
SMART:SM00541 SMART:SM00542 Pfam:PF00505 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 SMART:SM00398 SUPFAM:SSF47095
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0008168 InterPro:IPR003616 SMART:SM00508
PROSITE:PS50868 GO:GO:0051568 GeneTree:ENSGT00690000101661
OMA:VDPYERP EMBL:AADN02000310 EMBL:AADN02000311 EMBL:AADN02000312
IPI:IPI00593571 Ensembl:ENSGALT00000010124 Uniprot:F1NW66
Length = 4880
Score = 133 (51.9 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 31/89 (34%), Positives = 38/89 (42%)
Query: 15 CEVCQQG---GEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASPPAE- 70
CE C + G ++LCD C +YH CLDP L P+G W C CV SP
Sbjct: 963 CEACGKATDPGRLLLCDDCDISYHTYCLDPPLQTVPKGGWKCKWCVWCRHCGATSPGLRC 1022
Query: 71 EVKEKEVLCAKCKSPGDQFLLCETCNGSY 99
E + CA C S C C +Y
Sbjct: 1023 EWQNNYTQCAPCAS----LSTCPICYRTY 1047
Score = 133 (51.9 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 41/131 (31%), Positives = 50/131 (38%)
Query: 15 CEVCQQGGEIILC--DTCPRAYHLCCLDPE--LDETPEGKWSCPRCVSDGPPETASPPAE 70
C C+ G I C + C + YH C + CP + P E
Sbjct: 233 CAYCKHLGATIKCCEEKCTQMYHYPCAAGAGTFQDFSNLSLLCPDHIDQAP--------E 284
Query: 71 EVKEKEVLCAKCKSPGDQF--LLCETCNGSYHPHCLPDPIEGELPTSGWKCPKCS-CPPL 127
KE E CA C SPGD L C TC YH CL + L +GW+CP C C
Sbjct: 285 RSKE-EANCAVCDSPGDLLDQLFCTTCGQHYHGMCLDIQVT-PLKRAGWQCPDCKVCQNC 342
Query: 128 PGKLEDMASLL 138
ED L+
Sbjct: 343 KHSGEDNKMLV 353
Score = 125 (49.1 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 78 LCAKCKSPGD--QFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC 122
+C CK G+ + L+C+TC+ YH CL P+ +PT+GWKC C
Sbjct: 338 VCQNCKHSGEDNKMLVCDTCDKGYHTFCL-QPVMDSVPTNGWKCKNC 383
Score = 122 (48.0 bits), Expect = 7.5e-07, Sum P(2) = 7.5e-07
Identities = 25/85 (29%), Positives = 38/85 (44%)
Query: 15 CEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASPPAEE 71
C+ C+ GE +++CDTC + YH CL P +D P W C C E + + +
Sbjct: 339 CQNCKHSGEDNKMLVCDTCDKGYHTFCLQPVMDSVPTNGWKCKNCRVCA--ECGTRTSCQ 396
Query: 72 VKEKEVLCAKCKSPGDQFLLCETCN 96
++C C D L C C+
Sbjct: 397 WHHNCLVCDSCYQQQDN-LSCPFCD 420
Score = 118 (46.6 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 38/119 (31%), Positives = 49/119 (41%)
Query: 6 DLQTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETA 65
D T HQD C VC G+ L C + G+ P CVS +
Sbjct: 904 DKFTLHQDMCVVCGSFGQ------GAEGRLLAC-------SQCGQCYHPYCVSIKITKVV 950
Query: 66 SPPAEEVKEKEVL--CAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC 122
E V C K PG + LLC+ C+ SYH +CL P++ +P GWKC C
Sbjct: 951 LSKGWRCLECTVCEACGKATDPG-RLLLCDDCDISYHTYCLDPPLQ-TVPKGGWKCKWC 1007
Score = 99 (39.9 bits), Expect = 6.9e-08, Sum P(2) = 6.9e-08
Identities = 21/65 (32%), Positives = 30/65 (46%)
Query: 78 LCAKCKSPGD----QFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKCSCPPLPGKLED 133
+C C S G + L C C YHP+C+ I + + GW+C +C+ GK D
Sbjct: 912 MCVVCGSFGQGAEGRLLACSQCGQCYHPYCVSIKITKVVLSKGWRCLECTVCEACGKATD 971
Query: 134 MASLL 138
LL
Sbjct: 972 PGRLL 976
Score = 95 (38.5 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 16/52 (30%), Positives = 26/52 (50%)
Query: 8 QTEHQDYCEVCQQGGEII---LCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
+++ + C VC G+++ C TC + YH CLD ++ W CP C
Sbjct: 285 RSKEEANCAVCDSPGDLLDQLFCTTCGQHYHGMCLDIQVTPLKRAGWQCPDC 336
Score = 47 (21.6 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 13/41 (31%), Positives = 18/41 (43%)
Query: 42 ELDETPEGKWSCPRCVSDGPPETASPPAEEVKEKEVLCAKC 82
E+D T + R VS+ + + E K E LCA C
Sbjct: 43 EVDSTKQLTPVLQRSVSEESASSTASVGVEAKTSEQLCAFC 83
Score = 43 (20.2 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 113 PTSGWKCPKCSCPPLPGKLEDMASLLR 139
P S W P S PPL G+ + M++ R
Sbjct: 1571 PNSSW-AP--SAPPLEGEGDTMSNAQR 1594
Score = 35 (17.4 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 10/25 (40%), Positives = 11/25 (44%)
Query: 102 HCLPDPIEGELPTSGWKCPKCSCPP 126
HCLP E P+S P PP
Sbjct: 4259 HCLPQLQEKVSPSSS---PPIIFPP 4280
Score = 33 (16.7 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 100 HPHCLPDPIEGELPTSGWK 118
+P +P PI LP+S K
Sbjct: 3991 NPEPVPSPIIPILPSSTGK 4009
>UNIPROTKB|F1NRM1 [details] [associations]
symbol:F1NRM1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006959 "humoral immune response" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0045182 "translation regulator
activity" evidence=IEA] InterPro:IPR001965 InterPro:IPR004865
InterPro:IPR008087 InterPro:IPR019787 Pfam:PF00628 Pfam:PF03172
PRINTS:PR01711 PROSITE:PS50016 PROSITE:PS51414 SMART:SM00249
GO:GO:0005634 GO:GO:0005737 GO:GO:0006417 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0045182 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0006959
GeneTree:ENSGT00440000034278 EMBL:AADN02024441 EMBL:AADN02024442
IPI:IPI01017196 Ensembl:ENSGALT00000041318 ArrayExpress:F1NRM1
Uniprot:F1NRM1
Length = 537
Score = 175 (66.7 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 34/76 (44%), Positives = 44/76 (57%)
Query: 10 EHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASPPA 69
+++D C VC GGE+I CD CPRA+HL CL P L P G W C C G PET S +
Sbjct: 422 DNEDECAVCGDGGELICCDGCPRAFHLPCLVPPLPRVPRGLWLCSSCT--GIPETGSHES 479
Query: 70 EEVK-EKEVLCAKCKS 84
E+ +L AK ++
Sbjct: 480 SAAAGERVLLAAKLEN 495
Score = 140 (54.3 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 32/77 (41%), Positives = 41/77 (53%)
Query: 3 HIQD--LQTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGK----WSCPRC 56
H Q+ L +++D C VC GGE+I CD CPRA+HL CL P L P W+C
Sbjct: 281 HSQEPALYQDNEDECAVCGDGGELICCDGCPRAFHLPCLVPPLPRVPSPATAPLWNCTHT 340
Query: 57 V---SDGPP--ETASPP 68
+DG ET +PP
Sbjct: 341 AHHSTDGRTHTETHTPP 357
>UNIPROTKB|G4N2P7 [details] [associations]
symbol:MGG_04878 "Lid2 complex component lid2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR001841
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00184
SMART:SM00249 SMART:SM00501 SMART:SM00558 GO:GO:0005634
EMBL:CM001233 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
KO:K11446 RefSeq:XP_003712359.1 EnsemblFungi:MGG_04878T0
GeneID:2675627 KEGG:mgr:MGG_04878 Uniprot:G4N2P7
Length = 1755
Score = 139 (54.0 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 25/60 (41%), Positives = 36/60 (60%)
Query: 5 QDLQTEHQDYCEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGKWSCPRC-VSDG 60
+D T + C +C +G E I++C++C YH CLDP L P+ +W+CPRC V DG
Sbjct: 453 KDDSTPSPEKCHLCARGKETGFIVVCESCDYGYHGMCLDPPLKTKPDTEWNCPRCLVGDG 512
Score = 108 (43.1 bits), Expect = 0.00013, P = 0.00013
Identities = 23/61 (37%), Positives = 35/61 (57%)
Query: 62 PETASPPAEEVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPK 121
P+ S P+ E K LCA+ K G ++CE+C+ YH CL P++ + P + W CP+
Sbjct: 452 PKDDSTPSPE---KCHLCARGKETGF-IVVCESCDYGYHGMCLDPPLKTK-PDTEWNCPR 506
Query: 122 C 122
C
Sbjct: 507 C 507
Score = 70 (29.7 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 21/74 (28%), Positives = 33/74 (44%)
Query: 70 EEVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSG-WKCPKCSCP-PL 127
E+ + +EV C ++ + CE C+ YH CL G++ + CP C P+
Sbjct: 1325 EDPRFREVFCICRRTEAGMMIECELCHEWYHGKCLK-VARGKIREDDKYTCPICDWRVPI 1383
Query: 128 PG-----KLEDMAS 136
P LED+ S
Sbjct: 1384 PRDASRPNLEDLLS 1397
Score = 39 (18.8 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 70 EEVKEKEVLCAKCK 83
E+V E+E C CK
Sbjct: 851 EDVPEEEYQCGYCK 864
>UNIPROTKB|H0YF52 [details] [associations]
symbol:TRIM66 "Tripartite motif-containing protein 66"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00249 SMART:SM00297
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 EMBL:AC091053
EMBL:AC104360 HGNC:HGNC:29005 Ensembl:ENST00000530502
Uniprot:H0YF52
Length = 286
Score = 151 (58.2 bits), Expect = 3.0e-12, Sum P(2) = 3.0e-12
Identities = 25/54 (46%), Positives = 33/54 (61%)
Query: 10 EHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPE 63
E++D+C VC GGE++ CD CP+ +HL C P L P G+W C C S PE
Sbjct: 100 ENEDFCAVCLNGGELLCCDRCPKVFHLSCHVPALLSFPGGEWVCTLCRSLTQPE 153
Score = 33 (16.7 bits), Expect = 3.0e-12, Sum P(2) = 3.0e-12
Identities = 5/21 (23%), Positives = 10/21 (47%)
Query: 105 PDPIEGELPTSGWKCPKCSCP 125
P+ + ++ W C K + P
Sbjct: 237 PEEVVSDVRLMFWNCAKFNYP 257
>UNIPROTKB|F1Q4J4 [details] [associations]
symbol:KDM5A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 KO:K11446 CTD:5927 OMA:ECSKPRE
EMBL:AAEX03015319 EMBL:AAEX03015320 RefSeq:XP_854690.3
Ensembl:ENSCAFT00000025008 GeneID:477727 KEGG:cfa:477727
Uniprot:F1Q4J4
Length = 1688
Score = 127 (49.8 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 24/65 (36%), Positives = 36/65 (55%)
Query: 15 CEVCQQGG---EIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSD--GPPETASPPA 69
C C +G +++LCD C +YH CL P L + P+G W CP+CV++ P A
Sbjct: 296 CMFCGRGNNEDKLLLCDGCDDSYHTFCLIPPLPDVPKGDWRCPKCVAEECNKPREAFGFE 355
Query: 70 EEVKE 74
+ V+E
Sbjct: 356 QAVRE 360
Score = 109 (43.4 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 87 DQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC 122
D+ LLC+ C+ SYH CL P+ ++P W+CPKC
Sbjct: 306 DKLLLCDGCDDSYHTFCLIPPLP-DVPKGDWRCPKC 340
Score = 80 (33.2 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 24/73 (32%), Positives = 33/73 (45%)
Query: 75 KEVLCAKCKSPGDQFLL-CETCNGSYHPHCLPDPIEG-ELPTSGWK-------CPKCSCP 125
+EV C+ F+L CE C +H C+P P G + S W+ CP C
Sbjct: 1157 EEVKFCICRKTASGFMLQCELCKDWFHNSCVPLPKSGSQKKGSSWQAKEVKFLCPLCMRS 1216
Query: 126 PLPGKLEDMASLL 138
P +LE + SLL
Sbjct: 1217 RRP-RLETILSLL 1228
>GENEDB_PFALCIPARUM|PFF1185w [details] [associations]
symbol:PFF1185w "iswi protein homologue"
species:5833 "Plasmodium falciparum" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] [GO:0006338 "chromatin remodeling" evidence=ISS]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00490 GO:GO:0005524
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003723
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AL844505 RefSeq:XP_966228.1 ProteinModelPortal:C6KT82
IntAct:C6KT82 PRIDE:C6KT82 EnsemblProtists:PFF1185w:mRNA
GeneID:3885918 KEGG:pfa:PFF1185w EuPathDB:PlasmoDB:PF3D7_0624600
OMA:EERMAFR ProtClustDB:CLSZ2515339 Uniprot:C6KT82
Length = 2719
Score = 179 (68.1 bits), Expect = 5.9e-12, P = 5.9e-12
Identities = 41/126 (32%), Positives = 63/126 (50%)
Query: 10 EHQDYCEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEG-KWSCPRCVSDGPPET- 64
E++D C++C++ ++LCD CP +YH+ CL L PE KW CP C D
Sbjct: 67 ENEDRCKICREKSANLILLLCDGCPNSYHVSCLG--LAAEPESEKWYCPICKPDDHKNLD 124
Query: 65 -----ASPPAEEVKEKEV---LCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSG 116
+ + + V C C+ PG + L C+ C S+HP CLPD ++ + +
Sbjct: 125 VRRMRKGFVLDNMNGEHVNSSTCYVCQRPG-KLLGCDFCPNSFHPTCLPD-LDFDNISDQ 182
Query: 117 WKCPKC 122
W+CP C
Sbjct: 183 WECPCC 188
Score = 124 (48.7 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 22/61 (36%), Positives = 36/61 (59%)
Query: 4 IQDLQTEH--QDYCEVCQQGGEIILCDTCPRAYHLCCLDPELD-ETPEGKWSCPRCVSDG 60
+ ++ EH C VCQ+ G+++ CD CP ++H CL P+LD + +W CP C ++
Sbjct: 134 LDNMNGEHVNSSTCYVCQRPGKLLGCDFCPNSFHPTCL-PDLDFDNISDQWECPCCKNED 192
Query: 61 P 61
P
Sbjct: 193 P 193
Score = 122 (48.0 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 36/120 (30%), Positives = 54/120 (45%)
Query: 14 YCEVC----QQGGEIILCDTCPRAYHLCCLDPE-LDETPEGK----WSCPRCVSDGPPET 64
+C +C ++G E I C C + +H CL E L + + K + C +C+++
Sbjct: 7 WCTLCRENFEEGDECIQCKQCKKKFHRECLQAEGLMDNEQLKDIKNYVCYQCINED---- 62
Query: 65 ASPPAEEVKEKEVLCAKC--KSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC 122
+++ E E C C KS LLC+ C SYH CL E E + W CP C
Sbjct: 63 -----DDIPENEDRCKICREKSANLILLLCDGCPNSYHVSCLGLAAEPE--SEKWYCPIC 115
Score = 44 (20.5 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 78 LCAKCKSP-GDQFLLCETCNGSYHPHCLP 105
LC + S G+ + C TC S+ +C P
Sbjct: 1500 LCFRKSSQCGNLLIHCATCPTSFCYNCFP 1528
Score = 44 (20.5 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 12/39 (30%), Positives = 16/39 (41%)
Query: 86 GDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKCSC 124
GD + C C +YH C + I+ E W C C
Sbjct: 1463 GDM-INCFRCPKTYHKLC--EGIKDENVKKTWTCSWHEC 1498
Score = 42 (19.8 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 10/31 (32%), Positives = 12/31 (38%)
Query: 70 EEVKEKEVLCAKCKSPGDQFLLCETCNGSYH 100
E K+K K P +LCE C H
Sbjct: 1682 ETNKKKSTTFLHTKLPSKLLVLCENCKLPCH 1712
Score = 37 (18.1 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 6/11 (54%), Positives = 9/11 (81%)
Query: 78 LCAKCKSPGDQ 88
LC+KCK+ +Q
Sbjct: 1560 LCSKCKAVEEQ 1570
>UNIPROTKB|C6KT82 [details] [associations]
symbol:PFF1185w "Smarca-related protein" species:36329
"Plasmodium falciparum 3D7" [GO:0003723 "RNA binding" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00490 GO:GO:0005524
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003723
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AL844505 RefSeq:XP_966228.1 ProteinModelPortal:C6KT82
IntAct:C6KT82 PRIDE:C6KT82 EnsemblProtists:PFF1185w:mRNA
GeneID:3885918 KEGG:pfa:PFF1185w EuPathDB:PlasmoDB:PF3D7_0624600
OMA:EERMAFR ProtClustDB:CLSZ2515339 Uniprot:C6KT82
Length = 2719
Score = 179 (68.1 bits), Expect = 5.9e-12, P = 5.9e-12
Identities = 41/126 (32%), Positives = 63/126 (50%)
Query: 10 EHQDYCEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEG-KWSCPRCVSDGPPET- 64
E++D C++C++ ++LCD CP +YH+ CL L PE KW CP C D
Sbjct: 67 ENEDRCKICREKSANLILLLCDGCPNSYHVSCLG--LAAEPESEKWYCPICKPDDHKNLD 124
Query: 65 -----ASPPAEEVKEKEV---LCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSG 116
+ + + V C C+ PG + L C+ C S+HP CLPD ++ + +
Sbjct: 125 VRRMRKGFVLDNMNGEHVNSSTCYVCQRPG-KLLGCDFCPNSFHPTCLPD-LDFDNISDQ 182
Query: 117 WKCPKC 122
W+CP C
Sbjct: 183 WECPCC 188
Score = 124 (48.7 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 22/61 (36%), Positives = 36/61 (59%)
Query: 4 IQDLQTEH--QDYCEVCQQGGEIILCDTCPRAYHLCCLDPELD-ETPEGKWSCPRCVSDG 60
+ ++ EH C VCQ+ G+++ CD CP ++H CL P+LD + +W CP C ++
Sbjct: 134 LDNMNGEHVNSSTCYVCQRPGKLLGCDFCPNSFHPTCL-PDLDFDNISDQWECPCCKNED 192
Query: 61 P 61
P
Sbjct: 193 P 193
Score = 122 (48.0 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 36/120 (30%), Positives = 54/120 (45%)
Query: 14 YCEVC----QQGGEIILCDTCPRAYHLCCLDPE-LDETPEGK----WSCPRCVSDGPPET 64
+C +C ++G E I C C + +H CL E L + + K + C +C+++
Sbjct: 7 WCTLCRENFEEGDECIQCKQCKKKFHRECLQAEGLMDNEQLKDIKNYVCYQCINED---- 62
Query: 65 ASPPAEEVKEKEVLCAKC--KSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC 122
+++ E E C C KS LLC+ C SYH CL E E + W CP C
Sbjct: 63 -----DDIPENEDRCKICREKSANLILLLCDGCPNSYHVSCLGLAAEPE--SEKWYCPIC 115
Score = 44 (20.5 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 78 LCAKCKSP-GDQFLLCETCNGSYHPHCLP 105
LC + S G+ + C TC S+ +C P
Sbjct: 1500 LCFRKSSQCGNLLIHCATCPTSFCYNCFP 1528
Score = 44 (20.5 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 12/39 (30%), Positives = 16/39 (41%)
Query: 86 GDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKCSC 124
GD + C C +YH C + I+ E W C C
Sbjct: 1463 GDM-INCFRCPKTYHKLC--EGIKDENVKKTWTCSWHEC 1498
Score = 42 (19.8 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 10/31 (32%), Positives = 12/31 (38%)
Query: 70 EEVKEKEVLCAKCKSPGDQFLLCETCNGSYH 100
E K+K K P +LCE C H
Sbjct: 1682 ETNKKKSTTFLHTKLPSKLLVLCENCKLPCH 1712
Score = 37 (18.1 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 6/11 (54%), Positives = 9/11 (81%)
Query: 78 LCAKCKSPGDQ 88
LC+KCK+ +Q
Sbjct: 1560 LCSKCKAVEEQ 1570
>TAIR|locus:2040550 [details] [associations]
symbol:AT2G36720 "AT2G36720" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0009630 "gravitropism" evidence=RCA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016746 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 HSSP:Q14839 eggNOG:NOG145066 EMBL:AY093116
EMBL:BT008812 IPI:IPI00537974 RefSeq:NP_850270.1 UniGene:At.37517
ProteinModelPortal:Q8RWG0 SMR:Q8RWG0 PaxDb:Q8RWG0 PRIDE:Q8RWG0
EnsemblPlants:AT2G36720.1 GeneID:818244 KEGG:ath:AT2G36720
TAIR:At2g36720 HOGENOM:HOG000149118 InParanoid:Q8RWG0 OMA:DSCPRAF
PhylomeDB:Q8RWG0 ProtClustDB:CLSN2680077 Genevestigator:Q8RWG0
Uniprot:Q8RWG0
Length = 1007
Score = 136 (52.9 bits), Expect = 7.9e-12, Sum P(2) = 7.9e-12
Identities = 22/56 (39%), Positives = 32/56 (57%)
Query: 10 EHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETA 65
++ D C +C GG ++LCD+CPRA+H+ C+ L P G W C C + E A
Sbjct: 613 DNNDLCVICADGGNLLLCDSCPRAFHIECVS--LPSIPRGNWHCKYCENKFTSEIA 666
Score = 63 (27.2 bits), Expect = 7.9e-12, Sum P(2) = 7.9e-12
Identities = 19/66 (28%), Positives = 30/66 (45%)
Query: 77 VLCAK---CKSP-GDQ-FLLCETCNGSYHPHCLPDP--IE-GELPTSGWKCPKCSCPPLP 128
VLC+ C+S G + ++C+ C YH CL ++ ELP W C C +
Sbjct: 707 VLCSGSDFCRSGFGPRTIIICDQCEKEYHIGCLSSQNIVDLKELPKGNWFC-SMDCTRIN 765
Query: 129 GKLEDM 134
L+ +
Sbjct: 766 STLQKL 771
>UNIPROTKB|E9PSM3 [details] [associations]
symbol:Jarid1a "Protein Jarid1a" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005737 GO:GO:0045893 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003682 GO:GO:0016706
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0019907 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 IPI:IPI00365351
Ensembl:ENSRNOT00000034548 NextBio:665124 ArrayExpress:E9PSM3
Uniprot:E9PSM3
Length = 1690
Score = 125 (49.1 bits), Expect = 7.9e-12, Sum P(2) = 7.9e-12
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 15 CEVCQQGG---EIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSD 59
C C +G +++LCD C +YH CL P L + P+G W CP+CV++
Sbjct: 296 CMFCGRGNNEDKLLLCDGCDDSYHTFCLLPPLPDVPKGDWRCPKCVAE 343
Score = 109 (43.4 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 87 DQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC 122
D+ LLC+ C+ SYH CL P+ ++P W+CPKC
Sbjct: 306 DKLLLCDGCDDSYHTFCLLPPLP-DVPKGDWRCPKC 340
Score = 79 (32.9 bits), Expect = 7.9e-12, Sum P(2) = 7.9e-12
Identities = 24/73 (32%), Positives = 33/73 (45%)
Query: 75 KEVLCAKCKSPGDQFLL-CETCNGSYHPHCLPDPIEG-ELPTSGWK-------CPKCSCP 125
+EV C+ F+L CE C +H C+P P G + S W+ CP C
Sbjct: 1159 EEVKFCICRKTASGFMLQCELCKDWFHNGCVPLPKSGSQKKGSSWQAKDVKFLCPLCMRS 1218
Query: 126 PLPGKLEDMASLL 138
P +LE + SLL
Sbjct: 1219 RRP-RLETILSLL 1230
Score = 50 (22.7 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 24/84 (28%), Positives = 37/84 (44%)
Query: 55 RCVSDGPPETASPPAEEVKEKEVLCA--KCKSP-GDQ--FLLCET-CNGSYHPHCL---P 105
R V D P + AEE ++ +CA C+ P D+ ++ C+ C+ +H C+ P
Sbjct: 1586 RKVLDIPSKYDWSGAEESDDENAVCAAQNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVSP 1645
Query: 106 DPIEGELPTSGWKCPKCSCPPLPG 129
+ E E C K P PG
Sbjct: 1646 EMAENE-DYICINCAKKQGPDSPG 1668
>UNIPROTKB|F1NN75 [details] [associations]
symbol:KDM5A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0019907 "cyclin-dependent
protein kinase activating kinase holoenzyme complex" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005737 GO:GO:0045893
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003682
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0019907
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 OMA:ECSKPRE EMBL:AADN02006480
IPI:IPI00571489 Ensembl:ENSGALT00000021199 Uniprot:F1NN75
Length = 1696
Score = 126 (49.4 bits), Expect = 8.0e-12, Sum P(2) = 8.0e-12
Identities = 24/65 (36%), Positives = 36/65 (55%)
Query: 15 CEVCQQGG---EIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSD--GPPETASPPA 69
C C +G +++LCD C +YH CL P L + P+G W CP+CV++ P A
Sbjct: 299 CLFCGRGNNEDKLLLCDGCDDSYHTFCLIPPLPDVPKGDWRCPKCVAEECNKPREAFGFE 358
Query: 70 EEVKE 74
+ V+E
Sbjct: 359 QAVRE 363
Score = 109 (43.4 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 87 DQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC 122
D+ LLC+ C+ SYH CL P+ ++P W+CPKC
Sbjct: 309 DKLLLCDGCDDSYHTFCLIPPLP-DVPKGDWRCPKC 343
Score = 78 (32.5 bits), Expect = 8.0e-12, Sum P(2) = 8.0e-12
Identities = 23/73 (31%), Positives = 32/73 (43%)
Query: 75 KEVLCAKCKSPGDQFLL-CETCNGSYHPHCLPDP-IEGELPTSGWK-------CPKCSCP 125
+EV C+ F+L CE C +H C+P P + S W+ CP C
Sbjct: 1163 EEVKFCVCRKTASGFMLQCELCKDWFHSSCVPLPKTSSQKKGSSWQAKEVKFLCPLCMRS 1222
Query: 126 PLPGKLEDMASLL 138
P +LE + SLL
Sbjct: 1223 RRP-RLETILSLL 1234
>UNIPROTKB|F5H1F7 [details] [associations]
symbol:KDM5A "Lysine-specific demethylase 5A" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 EMBL:AC005844
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
EMBL:AC007406 HGNC:HGNC:9886 ChiTaRS:KDM5A IPI:IPI01018722
ProteinModelPortal:F5H1F7 SMR:F5H1F7 Ensembl:ENST00000382815
ArrayExpress:F5H1F7 Bgee:F5H1F7 Uniprot:F5H1F7
Length = 1636
Score = 127 (49.8 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 24/59 (40%), Positives = 33/59 (55%)
Query: 15 CEVCQQGG---EIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASPPAE 70
C C +G +++LCD C +YH CL P L + P+G W CP+CV+ E S P E
Sbjct: 296 CMFCGRGNNEDKLLLCDGCDDSYHTFCLIPPLPDVPKGDWRCPKCVA----EECSKPRE 350
Score = 109 (43.4 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 87 DQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC 122
D+ LLC+ C+ SYH CL P+ ++P W+CPKC
Sbjct: 306 DKLLLCDGCDDSYHTFCLIPPLP-DVPKGDWRCPKC 340
Score = 75 (31.5 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 23/73 (31%), Positives = 32/73 (43%)
Query: 75 KEVLCAKCKSPGDQFLL-CETCNGSYHPHCLPDP-IEGELPTSGWK-------CPKCSCP 125
+EV C+ F+L CE C +H C+P P + S W+ CP C
Sbjct: 1159 EEVKFCICRKTASGFMLQCELCKDWFHNSCVPLPKSSSQKKGSSWQAKEVKFLCPLCMRS 1218
Query: 126 PLPGKLEDMASLL 138
P +LE + SLL
Sbjct: 1219 RRP-RLETILSLL 1230
>UNIPROTKB|P29375 [details] [associations]
symbol:KDM5A "Lysine-specific demethylase 5A" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0019907 "cyclin-dependent
protein kinase activating kinase holoenzyme complex" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=TAS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0007275 GO:GO:0005634 GO:GO:0005737 GO:GO:0045893
GO:GO:0005730 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0003700 GO:GO:0003682 GO:GO:0016568 GO:GO:0006366
GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 EMBL:AC005844
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
EMBL:AC007406 eggNOG:NOG327026 KO:K11446 EMBL:S66431 EMBL:AB209999
EMBL:BC048307 EMBL:BC053893 EMBL:BC110916 IPI:IPI00021363
IPI:IPI01014284 PIR:I78879 RefSeq:NP_001036068.1 UniGene:Hs.76272
PDB:2JXJ PDB:2KGG PDB:2KGI PDB:3GL6 PDBsum:2JXJ PDBsum:2KGG
PDBsum:2KGI PDBsum:3GL6 ProteinModelPortal:P29375 SMR:P29375
DIP:DIP-472N IntAct:P29375 STRING:P29375 PhosphoSite:P29375
DMDM:215274124 PaxDb:P29375 PRIDE:P29375 Ensembl:ENST00000399788
GeneID:5927 KEGG:hsa:5927 UCSC:uc001qif.1 CTD:5927
GeneCards:GC12M000389 H-InvDB:HIX0010308 HGNC:HGNC:9886
HPA:HPA006201 MIM:180202 neXtProt:NX_P29375 PharmGKB:PA34250
HOGENOM:HOG000290719 OMA:ECSKPRE OrthoDB:EOG4GB758 ChiTaRS:KDM5A
EvolutionaryTrace:P29375 GenomeRNAi:5927 NextBio:23088
ArrayExpress:P29375 Bgee:P29375 CleanEx:HS_JARID1A CleanEx:HS_RBP2
Genevestigator:P29375 GermOnline:ENSG00000073614 Uniprot:P29375
Length = 1690
Score = 127 (49.8 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 24/59 (40%), Positives = 33/59 (55%)
Query: 15 CEVCQQGG---EIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASPPAE 70
C C +G +++LCD C +YH CL P L + P+G W CP+CV+ E S P E
Sbjct: 296 CMFCGRGNNEDKLLLCDGCDDSYHTFCLIPPLPDVPKGDWRCPKCVA----EECSKPRE 350
Score = 109 (43.4 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 87 DQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC 122
D+ LLC+ C+ SYH CL P+ ++P W+CPKC
Sbjct: 306 DKLLLCDGCDDSYHTFCLIPPLP-DVPKGDWRCPKC 340
Score = 75 (31.5 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 23/73 (31%), Positives = 32/73 (43%)
Query: 75 KEVLCAKCKSPGDQFLL-CETCNGSYHPHCLPDP-IEGELPTSGWK-------CPKCSCP 125
+EV C+ F+L CE C +H C+P P + S W+ CP C
Sbjct: 1159 EEVKFCICRKTASGFMLQCELCKDWFHNSCVPLPKSSSQKKGSSWQAKEVKFLCPLCMRS 1218
Query: 126 PLPGKLEDMASLL 138
P +LE + SLL
Sbjct: 1219 RRP-RLETILSLL 1230
>UNIPROTKB|F1N9E9 [details] [associations]
symbol:Gga.18314 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] InterPro:IPR001841
Pfam:PF00856 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00570 Pfam:PF00855 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 EMBL:AADN02028734 EMBL:AADN02028735 EMBL:AADN02028736
EMBL:AADN02028737 EMBL:AADN02028738 EMBL:AADN02028739
EMBL:AADN02028740 EMBL:AADN02028741 EMBL:AADN02028742
EMBL:AADN02028743 EMBL:AADN02070525 IPI:IPI00597924
Ensembl:ENSGALT00000004685 ArrayExpress:F1N9E9 Uniprot:F1N9E9
Length = 2114
Score = 128 (50.1 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 35/116 (30%), Positives = 54/116 (46%)
Query: 6 DLQTEHQDYCEVCQQGGEIILCDT--CPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPE 63
++ E +D C C GG+++ C CP+ YH CL+ L + P GKW CP D +
Sbjct: 1719 EVMKEREDECFSCGDGGQLVSCKKAGCPKVYHADCLN--LTKRPAGKWECPWHQCDMCGK 1776
Query: 64 TASPPAEEVKEKEVLCAK--CKSPGDQFLLCETCNG----SYHPHCLPDPIE-GEL 112
A+ E +C + CK + L +G + H C P+P+E GE+
Sbjct: 1777 EAASFCE-------MCPRSFCKQHREGMLFISKLDGRLSCTEHDPCGPNPLEPGEI 1825
Score = 123 (48.4 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 22/55 (40%), Positives = 33/55 (60%)
Query: 10 EHQD--YCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPP 62
EH + +C VC +GG ++ C++CP A+H CL+ E+ PEG W C C + P
Sbjct: 1307 EHVNVSWCFVCSEGGSLLCCESCPAAFHRECLNIEM---PEGSWYCNDCKAGKKP 1358
Score = 113 (44.8 bits), Expect = 9.6e-06, Sum P(2) = 9.6e-06
Identities = 33/114 (28%), Positives = 49/114 (42%)
Query: 12 QDYCEVCQQGGEIILCDT-CPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASPPAE 70
++ C++C++ GE++LC+ C A+HL CL L E P GK+ C C S G T
Sbjct: 1147 ENVCQICEKPGELLLCEAQCCGAFHLQCLG--LSEMPTGKFICNEC-STGV-HTC----- 1197
Query: 71 EVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKCSC 124
+C C + LL C YH C+ G++C C
Sbjct: 1198 ------FVCKNCGQDVKRCLL-PLCGKYYHEECIQKYPPTVTQNKGFRCSLHIC 1244
Score = 81 (33.6 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 29/84 (34%), Positives = 38/84 (45%)
Query: 69 AEEVKEKEVLCAKCKSPGDQFLLCET--CNGSYHPHCLPDPIEGELPTSGWKCPKCSCPP 126
AE +KE+E C C G Q + C+ C YH CL + P W+CP C
Sbjct: 1718 AEVMKEREDECFSC-GDGGQLVSCKKAGCPKVYHADCLNLT---KRPAGKWECPWHQCD- 1772
Query: 127 LPGKLEDMASLLRL-PR----QHR 145
+ GK + AS + PR QHR
Sbjct: 1773 MCGK--EAASFCEMCPRSFCKQHR 1794
Score = 34 (17.0 bits), Expect = 9.0e-07, Sum P(2) = 9.0e-07
Identities = 4/7 (57%), Positives = 6/7 (85%)
Query: 120 PKCSCPP 126
P+C+C P
Sbjct: 1497 PRCNCKP 1503
>UNIPROTKB|F1N972 [details] [associations]
symbol:Gga.18314 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0001702 "gastrulation with mouth forming second" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003712
"transcription cofactor activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0050681 "androgen
receptor binding" evidence=IEA] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR006560
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280
PROSITE:PS51215 SMART:SM00184 SMART:SM00249 SMART:SM00317
SMART:SM00570 Pfam:PF00855 GO:GO:0005634 GO:GO:0045893
GO:GO:0046872 GO:GO:0008270 GO:GO:0003682 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0003712
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 EMBL:AADN02028734 EMBL:AADN02028735 EMBL:AADN02028736
EMBL:AADN02028737 EMBL:AADN02028738 EMBL:AADN02028739
EMBL:AADN02028740 EMBL:AADN02028741 EMBL:AADN02028742
EMBL:AADN02028743 EMBL:AADN02070525 IPI:IPI00581947
Ensembl:ENSGALT00000004699 OMA:KYYHEEC ArrayExpress:F1N972
Uniprot:F1N972
Length = 2205
Score = 128 (50.1 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 35/116 (30%), Positives = 54/116 (46%)
Query: 6 DLQTEHQDYCEVCQQGGEIILCDT--CPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPE 63
++ E +D C C GG+++ C CP+ YH CL+ L + P GKW CP D +
Sbjct: 1826 EVMKEREDECFSCGDGGQLVSCKKAGCPKVYHADCLN--LTKRPAGKWECPWHQCDMCGK 1883
Query: 64 TASPPAEEVKEKEVLCAK--CKSPGDQFLLCETCNG----SYHPHCLPDPIE-GEL 112
A+ E +C + CK + L +G + H C P+P+E GE+
Sbjct: 1884 EAASFCE-------MCPRSFCKQHREGMLFISKLDGRLSCTEHDPCGPNPLEPGEI 1932
Score = 123 (48.4 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 22/55 (40%), Positives = 33/55 (60%)
Query: 10 EHQD--YCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPP 62
EH + +C VC +GG ++ C++CP A+H CL+ E+ PEG W C C + P
Sbjct: 1414 EHVNVSWCFVCSEGGSLLCCESCPAAFHRECLNIEM---PEGSWYCNDCKAGKKP 1465
Score = 113 (44.8 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 33/114 (28%), Positives = 49/114 (42%)
Query: 12 QDYCEVCQQGGEIILCDT-CPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASPPAE 70
++ C++C++ GE++LC+ C A+HL CL L E P GK+ C C S G T
Sbjct: 1254 ENVCQICEKPGELLLCEAQCCGAFHLQCLG--LSEMPTGKFICNEC-STGV-HTC----- 1304
Query: 71 EVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKCSC 124
+C C + LL C YH C+ G++C C
Sbjct: 1305 ------FVCKNCGQDVKRCLL-PLCGKYYHEECIQKYPPTVTQNKGFRCSLHIC 1351
Score = 81 (33.6 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 29/84 (34%), Positives = 38/84 (45%)
Query: 69 AEEVKEKEVLCAKCKSPGDQFLLCET--CNGSYHPHCLPDPIEGELPTSGWKCPKCSCPP 126
AE +KE+E C C G Q + C+ C YH CL + P W+CP C
Sbjct: 1825 AEVMKEREDECFSC-GDGGQLVSCKKAGCPKVYHADCLNLT---KRPAGKWECPWHQCD- 1879
Query: 127 LPGKLEDMASLLRL-PR----QHR 145
+ GK + AS + PR QHR
Sbjct: 1880 MCGK--EAASFCEMCPRSFCKQHR 1901
Score = 34 (17.0 bits), Expect = 9.8e-07, Sum P(2) = 9.8e-07
Identities = 4/7 (57%), Positives = 6/7 (85%)
Query: 120 PKCSCPP 126
P+C+C P
Sbjct: 1604 PRCNCKP 1610
>UNIPROTKB|F1NX82 [details] [associations]
symbol:PHF21B "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 OMA:SDKQALG
GeneTree:ENSGT00530000063984 EMBL:AADN02006727 IPI:IPI00584515
Ensembl:ENSGALT00000022994 Uniprot:F1NX82
Length = 447
Score = 165 (63.1 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 25/49 (51%), Positives = 32/49 (65%)
Query: 8 QTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
+ H +YC C++G + C TCPRAYHL CLDP L P+G W CP+C
Sbjct: 262 EIHHDEYCTACKRGVNLQPCGTCPRAYHLNCLDPPLKTAPKGVWVCPKC 310
>MGI|MGI:2136980 [details] [associations]
symbol:Kdm5a "lysine (K)-specific demethylase 5A"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016702 "oxidoreductase
activity, acting on single donors with incorporation of molecular
oxygen, incorporation of two atoms of oxygen" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
MGI:MGI:2136980 GO:GO:0007275 GO:GO:0005737 GO:GO:0045893
GO:GO:0005730 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0003682 GO:GO:0016568 GO:GO:0016706
GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0019907
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
eggNOG:NOG327026 GeneTree:ENSGT00530000063118 KO:K11446 CTD:5927
HOGENOM:HOG000290719 OMA:ECSKPRE ChiTaRS:KDM5A EMBL:AC155720
EMBL:AC078896 EMBL:AK135085 EMBL:AK144877 EMBL:AK166055
EMBL:BC080691 IPI:IPI00849089 RefSeq:NP_666109.2 UniGene:Mm.404761
UniGene:Mm.463658 ProteinModelPortal:Q3UXZ9 SMR:Q3UXZ9
IntAct:Q3UXZ9 STRING:Q3UXZ9 PhosphoSite:Q3UXZ9 PaxDb:Q3UXZ9
PRIDE:Q3UXZ9 Ensembl:ENSMUST00000100996 GeneID:214899
KEGG:mmu:214899 UCSC:uc009dne.2 InParanoid:Q3UXZ9 NextBio:374501
Bgee:Q3UXZ9 CleanEx:MM_RBP2 Genevestigator:Q3UXZ9 Uniprot:Q3UXZ9
Length = 1690
Score = 126 (49.4 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 24/65 (36%), Positives = 36/65 (55%)
Query: 15 CEVCQQGG---EIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSD--GPPETASPPA 69
C C +G +++LCD C +YH CL P L + P+G W CP+CV++ P A
Sbjct: 296 CMFCGRGNNEDKLLLCDGCDDSYHTFCLLPPLPDVPKGDWRCPKCVAEECNKPREAFGFE 355
Query: 70 EEVKE 74
+ V+E
Sbjct: 356 QAVRE 360
Score = 109 (43.4 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 87 DQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC 122
D+ LLC+ C+ SYH CL P+ ++P W+CPKC
Sbjct: 306 DKLLLCDGCDDSYHTFCLLPPLP-DVPKGDWRCPKC 340
Score = 75 (31.5 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 23/73 (31%), Positives = 32/73 (43%)
Query: 75 KEVLCAKCKSPGDQFLL-CETCNGSYHPHCLPDP-IEGELPTSGWK-------CPKCSCP 125
+EV C+ F+L CE C +H C+P P + S W+ CP C
Sbjct: 1159 EEVKFCICRKTASGFMLQCELCKDWFHNSCVPLPKSSSQKKGSSWQAKDVKFLCPLCMRS 1218
Query: 126 PLPGKLEDMASLL 138
P +LE + SLL
Sbjct: 1219 RRP-RLETILSLL 1230
>UNIPROTKB|J9NUG7 [details] [associations]
symbol:WHSC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF00856 InterPro:IPR009071 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50280
PROSITE:PS51215 SMART:SM00184 SMART:SM00249 SMART:SM00317
SMART:SM00570 Pfam:PF00855 Pfam:PF00505 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 EMBL:AAEX03002459
Ensembl:ENSCAFT00000043831 Uniprot:J9NUG7
Length = 1359
Score = 134 (52.2 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 27/60 (45%), Positives = 35/60 (58%)
Query: 10 EHQDYCEVCQQGGEIILCD--TCPRAYHLCCLDPELDETPEGKWSCP--RCVSDGPPETA 65
E +D C C GG+++LCD +C +AYHL CL L + P GKW CP C G P T+
Sbjct: 1231 ESEDECFRCGDGGQLVLCDRKSCTKAYHLSCLG--LGKRPFGKWECPWHHCDVCGKPSTS 1288
Score = 119 (46.9 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 32/118 (27%), Positives = 56/118 (47%)
Query: 9 TEHQDY-CEVCQQGGEIILCD-TCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETAS 66
T ++Y C++C++ G ++LC+ C A+HL CL L PEG+++C C S G
Sbjct: 657 TAKKEYVCQLCEKTGSLVLCEGPCCGAFHLACLG--LSRRPEGRFTCSECAS-GIHSC-- 711
Query: 67 PPAEEVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKCSC 124
+C + K+ + ++ + C YH C+ + G++CP SC
Sbjct: 712 ----------FVCKESKTDVKRCVVSQ-CGKFYHEACVRKYPLAVFESRGFRCPLHSC 758
Score = 113 (44.8 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 14 YCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
+C VC +GG ++ C++CP A+H CL+ ++ P+G W C C
Sbjct: 827 WCFVCSKGGSLLCCESCPAAFHPDCLNIDM---PDGSWFCNDC 866
Score = 86 (35.3 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 21/57 (36%), Positives = 28/57 (49%)
Query: 70 EEVKEKEVLCAKCKSPGDQFLLCE--TCNGSYHPHCLPDPIEGELPTSGWKCPKCSC 124
E KE E C +C G Q +LC+ +C +YH CL G+ P W+CP C
Sbjct: 1227 EGKKESEDECFRC-GDGGQLVLCDRKSCTKAYHLSCLG---LGKRPFGKWECPWHHC 1279
Score = 37 (18.1 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 5/7 (71%), Positives = 6/7 (85%)
Query: 120 PKCSCPP 126
PKC+C P
Sbjct: 1008 PKCNCKP 1014
>UNIPROTKB|F1PK46 [details] [associations]
symbol:WHSC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF00856 InterPro:IPR009071 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50280
PROSITE:PS51215 SMART:SM00184 SMART:SM00249 SMART:SM00317
SMART:SM00570 Pfam:PF00855 Pfam:PF00505 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 OMA:DVKRCVV
EMBL:AAEX03002459 Ensembl:ENSCAFT00000023738 Uniprot:F1PK46
Length = 1362
Score = 134 (52.2 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 27/60 (45%), Positives = 35/60 (58%)
Query: 10 EHQDYCEVCQQGGEIILCD--TCPRAYHLCCLDPELDETPEGKWSCP--RCVSDGPPETA 65
E +D C C GG+++LCD +C +AYHL CL L + P GKW CP C G P T+
Sbjct: 1234 ESEDECFRCGDGGQLVLCDRKSCTKAYHLSCLG--LGKRPFGKWECPWHHCDVCGKPSTS 1291
Score = 119 (46.9 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 32/118 (27%), Positives = 56/118 (47%)
Query: 9 TEHQDY-CEVCQQGGEIILCD-TCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETAS 66
T ++Y C++C++ G ++LC+ C A+HL CL L PEG+++C C S G
Sbjct: 660 TAKKEYVCQLCEKTGSLVLCEGPCCGAFHLACLG--LSRRPEGRFTCSECAS-GIHSC-- 714
Query: 67 PPAEEVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKCSC 124
+C + K+ + ++ + C YH C+ + G++CP SC
Sbjct: 715 ----------FVCKESKTDVKRCVVSQ-CGKFYHEACVRKYPLAVFESRGFRCPLHSC 761
Score = 113 (44.8 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 14 YCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
+C VC +GG ++ C++CP A+H CL+ ++ P+G W C C
Sbjct: 830 WCFVCSKGGSLLCCESCPAAFHPDCLNIDM---PDGSWFCNDC 869
Score = 86 (35.3 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 21/57 (36%), Positives = 28/57 (49%)
Query: 70 EEVKEKEVLCAKCKSPGDQFLLCE--TCNGSYHPHCLPDPIEGELPTSGWKCPKCSC 124
E KE E C +C G Q +LC+ +C +YH CL G+ P W+CP C
Sbjct: 1230 EGKKESEDECFRC-GDGGQLVLCDRKSCTKAYHLSCLG---LGKRPFGKWECPWHHC 1282
Score = 37 (18.1 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 5/7 (71%), Positives = 6/7 (85%)
Query: 120 PKCSCPP 126
PKC+C P
Sbjct: 1011 PKCNCKP 1017
>UNIPROTKB|F1NMG7 [details] [associations]
symbol:F1NMG7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0045182 "translation regulator activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006959 "humoral immune response" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR001965
InterPro:IPR004865 InterPro:IPR008087 InterPro:IPR019787
Pfam:PF00628 Pfam:PF03172 PRINTS:PR01711 PROSITE:PS50016
PROSITE:PS51414 SMART:SM00249 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 GO:GO:0006417 GO:GO:0046872 GO:GO:0015629
GO:GO:0008270 GO:GO:0045944 GO:GO:0003682 GO:GO:0045182
GO:GO:0044212 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 OMA:NDDECAV GO:GO:0006959
GeneTree:ENSGT00440000034278 EMBL:AADN02024441 EMBL:AADN02024442
IPI:IPI00575755 Ensembl:ENSGALT00000002020 ArrayExpress:F1NMG7
Uniprot:F1NMG7
Length = 584
Score = 166 (63.5 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 29/61 (47%), Positives = 37/61 (60%)
Query: 10 EHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVS---DGPPETAS 66
+++D C VC GGE+I CD CPRA+HL CL P L P G W C CV+ + P A+
Sbjct: 454 DNEDECAVCGDGGELICCDGCPRAFHLPCLVPPLPRVPSGTWQCSSCVAKEEEHSPGAAT 513
Query: 67 P 67
P
Sbjct: 514 P 514
Score = 140 (54.3 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 30/70 (42%), Positives = 38/70 (54%)
Query: 8 QTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGK----WSCPRCV---SDG 60
Q +++D C VC GGE+I CD CPRA+HL CL P L P W+C +DG
Sbjct: 297 QQDNEDECAVCGDGGELICCDGCPRAFHLPCLVPPLPRVPSPATAPLWNCTHTAHHSTDG 356
Query: 61 PP--ETASPP 68
ET +PP
Sbjct: 357 RTHTETHTPP 366
>UNIPROTKB|F1MQ59 [details] [associations]
symbol:KDM5A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0019907 "cyclin-dependent protein kinase activating kinase
holoenzyme complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005737 GO:GO:0045893
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0003682
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0019907
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 OMA:ECSKPRE EMBL:DAAA02014587
IPI:IPI00715082 Ensembl:ENSBTAT00000027280 Uniprot:F1MQ59
Length = 1693
Score = 127 (49.8 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 24/65 (36%), Positives = 36/65 (55%)
Query: 15 CEVCQQGG---EIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSD--GPPETASPPA 69
C C +G +++LCD C +YH CL P L + P+G W CP+CV++ P A
Sbjct: 296 CMFCGRGNNEDKLLLCDGCDDSYHTFCLIPPLPDVPKGDWRCPKCVAEECNKPREAFGFE 355
Query: 70 EEVKE 74
+ V+E
Sbjct: 356 QAVRE 360
Score = 109 (43.4 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 87 DQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC 122
D+ LLC+ C+ SYH CL P+ ++P W+CPKC
Sbjct: 306 DKLLLCDGCDDSYHTFCLIPPLP-DVPKGDWRCPKC 340
Score = 72 (30.4 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 21/66 (31%), Positives = 29/66 (43%)
Query: 82 CKSPGDQFLL-CETCNGSYHPHCLPDP-IEGELPTSGWK-------CPKCSCPPLPGKLE 132
C+ F+L CE C +H C+P P + S W+ CP C P +LE
Sbjct: 1167 CRKTASGFMLQCELCKDWFHNSCVPLPKSSSQKKGSSWQAKEVKFLCPLCMRSRRP-RLE 1225
Query: 133 DMASLL 138
+ SLL
Sbjct: 1226 TILSLL 1231
>UNIPROTKB|F1S8S0 [details] [associations]
symbol:WHSC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060348 "bone development" evidence=IEA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003290 "atrial septum secundum morphogenesis" evidence=IEA]
[GO:0003289 "atrial septum primum morphogenesis" evidence=IEA]
[GO:0003149 "membranous septum morphogenesis" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR009071 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184
SMART:SM00249 SMART:SM00317 SMART:SM00570 Pfam:PF00855 Pfam:PF00505
GO:GO:0005730 GO:GO:0046872 GO:GO:0008270 GO:GO:0031965
GO:GO:0003682 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0003289 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0060348 GO:GO:0018024
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 GO:GO:0003149 GO:GO:0003290 OMA:DVKRCVV EMBL:FP102229
EMBL:FP102127 Ensembl:ENSSSCT00000009499 Uniprot:F1S8S0
Length = 1361
Score = 128 (50.1 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 26/58 (44%), Positives = 34/58 (58%)
Query: 12 QDYCEVCQQGGEIILCD--TCPRAYHLCCLDPELDETPEGKWSCP--RCVSDGPPETA 65
+D C C GG+++LCD +C +AYHL CL L + P GKW CP C G P T+
Sbjct: 1235 EDECFRCGDGGQLVLCDRKSCTKAYHLPCLG--LGKRPFGKWECPWHHCDVCGKPSTS 1290
Score = 116 (45.9 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 14 YCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
+C VC +GG ++ C++CP A+H CL+ E+ P+G W C C
Sbjct: 829 WCFVCSKGGSLLCCESCPAAFHPDCLNIEM---PDGSWFCNDC 868
Score = 107 (42.7 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 34/117 (29%), Positives = 52/117 (44%)
Query: 10 EHQDYCEVCQQGGEIILCD-TCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASPP 68
EH C++C++ G ++LC+ C A+HL CL L PEG+ +C C S G
Sbjct: 663 EH--VCQLCEKPGSLVLCEGPCCGAFHLACLG--LARRPEGRLTCLECTS-GVHSCFV-- 715
Query: 69 AEEVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPD-PIEGELPTSGWKCPKCSC 124
KE + +C + C YH C+ P+ + G++CP SC
Sbjct: 716 ---CKESKADVRRC--------VVSQCGKFYHEACVRRFPLT-VFESRGFRCPLHSC 760
Score = 80 (33.2 bits), Expect = 3.4e-11, Sum P(2) = 3.4e-11
Identities = 20/57 (35%), Positives = 27/57 (47%)
Query: 70 EEVKEKEVLCAKCKSPGDQFLLCE--TCNGSYHPHCLPDPIEGELPTSGWKCPKCSC 124
E K E C +C G Q +LC+ +C +YH CL G+ P W+CP C
Sbjct: 1229 EGKKRSEDECFRC-GDGGQLVLCDRKSCTKAYHLPCLG---LGKRPFGKWECPWHHC 1281
Score = 37 (18.1 bits), Expect = 9.1e-07, Sum P(2) = 9.1e-07
Identities = 5/7 (71%), Positives = 6/7 (85%)
Query: 120 PKCSCPP 126
PKC+C P
Sbjct: 1010 PKCNCKP 1016
>UNIPROTKB|H0Y9U6 [details] [associations]
symbol:WHSC1 "Histone-lysine N-methyltransferase NSD2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 Pfam:PF00855 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR000313
PROSITE:PS50812 SMART:SM00293 EMBL:AL132868 EMBL:AC105448
HGNC:HGNC:12766 ChiTaRS:WHSC1 Ensembl:ENST00000514329
Uniprot:H0Y9U6
Length = 284
Score = 157 (60.3 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 41/128 (32%), Positives = 60/128 (46%)
Query: 9 TEHQDY-CEVCQQGGEIILCD-TCPRAYHLCCLDPELDETPEGKWSCPRCVS-------D 59
T ++Y C++C++ G ++LC+ C A+HL CL L PEG+++C C S +
Sbjct: 76 TAKKEYVCQLCEKPGSLLLCEGPCCGAFHLACLG--LSRRPEGRFTCSECASGCSVIASN 133
Query: 60 GPPETASPPAEEVKEKEV-----LCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPT 114
TA A + K C C S G L CE+C ++HP CL E+P
Sbjct: 134 SIICTAHFTARKGKRHHAHVNVSWCFVC-SKGGSLLCCESCPAAFHPDCL----NIEMPD 188
Query: 115 SGWKCPKC 122
W C C
Sbjct: 189 GSWFCNDC 196
>UNIPROTKB|F1PMA7 [details] [associations]
symbol:PHF14 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GeneTree:ENSGT00690000102091 OMA:SQELSME
EMBL:AAEX03009333 EMBL:AAEX03009334 Ensembl:ENSCAFT00000003573
Uniprot:F1PMA7
Length = 847
Score = 109 (43.4 bits), Expect = 4.4e-05, P = 4.4e-05
Identities = 28/87 (32%), Positives = 41/87 (47%)
Query: 5 QDLQTEHQDYCEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGK---WSCPRCVS 58
+DL+TE C C+ G+ ++ CD C YH CLDP L ++P+ W C C S
Sbjct: 764 EDLRTE----CATCKGTGDNENLVRCDECRLCYHFGCLDPPLKKSPKQTGYGWICQECDS 819
Query: 59 DGPPETASPPAEEVKEKEVLCAKCKSP 85
E + AE + L + K+P
Sbjct: 820 SSSKEDENE-AERKNISQELSMEQKNP 845
Score = 105 (42.0 bits), Expect = 4.6e-11, Sum P(2) = 4.6e-11
Identities = 22/64 (34%), Positives = 30/64 (46%)
Query: 15 CEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPE----GKWSCPRCVSDGPPETASP 67
C +C++ + ++LCDTC YHL CLDP L P W C C G + +
Sbjct: 627 CGICKKNHDQHLLLLCDTCKLHYHLGCLDPPLTRMPRKTKNSYWQCSECDQAGSSDMEAD 686
Query: 68 PAEE 71
A E
Sbjct: 687 MAME 690
Score = 91 (37.1 bits), Expect = 4.6e-11, Sum P(2) = 4.6e-11
Identities = 20/60 (33%), Positives = 30/60 (50%)
Query: 67 PPAEEVKEKEVLCAKCKSPGDQ--FLLCETCNGSYHPHCLPDPIEGELPTSG--WKCPKC 122
P AE+++ + CA CK GD + C+ C YH CL P++ +G W C +C
Sbjct: 761 PKAEDLRTE---CATCKGTGDNENLVRCDECRLCYHFGCLDPPLKKSPKQTGYGWICQEC 817
Score = 53 (23.7 bits), Expect = 0.00099, Sum P(2) = 0.00099
Identities = 23/81 (28%), Positives = 28/81 (34%)
Query: 10 EHQDYCEVC-----QQGGEIILCDTCPRAYHLCC--LDPELD-------ETPEGKWSCPR 55
+H C VC + EII CD C H C +D E D E W C
Sbjct: 216 DHILICCVCLGDNSEDADEIIQCDNCGITVHEGCYGVDGESDSIMSSASENSTEPWFCDA 275
Query: 56 CVSDGPPETASPPAEEVKEKE 76
C P P ++ KE
Sbjct: 276 CKCGVSPSCELCPNQDGIFKE 296
>UNIPROTKB|O96028 [details] [associations]
symbol:WHSC1 "Histone-lysine N-methyltransferase NSD2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0003149 "membranous
septum morphogenesis" evidence=IEA] [GO:0003289 "atrial septum
primum morphogenesis" evidence=IEA] [GO:0003290 "atrial septum
secundum morphogenesis" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0060348 "bone development" evidence=IEA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0009653 "anatomical structure morphogenesis"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0031965 "nuclear membrane"
evidence=IDA] InterPro:IPR001841 Pfam:PF00856 InterPro:IPR009071
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR006560
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280
PROSITE:PS51215 SMART:SM00184 SMART:SM00249 SMART:SM00317
SMART:SM00570 Pfam:PF00855 Pfam:PF00505 GO:GO:0005737 GO:GO:0005694
GO:GO:0005730 EMBL:CH471131 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0031965 GO:GO:0006351 GO:GO:0003682
GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0003289 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0009653 GO:GO:0060348 eggNOG:COG2940
GO:GO:0018024 InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 EMBL:AL132868
GO:GO:0003149 GO:GO:0003290 Orphanet:280 KO:K11424 EMBL:AF071593
EMBL:AF071594 EMBL:AF083386 EMBL:AF083387 EMBL:AF083388
EMBL:AF083389 EMBL:AF083390 EMBL:AF083391 EMBL:AF178206
EMBL:AF178199 EMBL:AF178198 EMBL:AF178202 EMBL:AF178204
EMBL:AF178205 EMBL:AF178203 EMBL:AF178201 EMBL:AF178200
EMBL:AF178219 EMBL:AF178207 EMBL:AF178216 EMBL:AF178215
EMBL:AF178214 EMBL:AF178213 EMBL:AF178212 EMBL:AF178211
EMBL:AF178210 EMBL:AF178209 EMBL:AF178208 EMBL:AF178218
EMBL:AF178217 EMBL:AF330040 EMBL:AY694128 EMBL:AJ007042
EMBL:AB029013 EMBL:AK289697 EMBL:AC105448 EMBL:BC052254
EMBL:BC070176 EMBL:BC094825 EMBL:BC141815 EMBL:BC152412
IPI:IPI00107486 IPI:IPI00107487 IPI:IPI00218240 IPI:IPI00334604
IPI:IPI00470433 IPI:IPI00790144 IPI:IPI00792674
RefSeq:NP_001035889.1 RefSeq:NP_015627.1 RefSeq:NP_579877.1
RefSeq:NP_579878.1 RefSeq:NP_579889.1 RefSeq:NP_579890.1
UniGene:Hs.113876 HSSP:Q9BYU8 ProteinModelPortal:O96028 SMR:O96028
IntAct:O96028 MINT:MINT-7103764 STRING:O96028 PhosphoSite:O96028
PaxDb:O96028 PRIDE:O96028 DNASU:7468 Ensembl:ENST00000312087
Ensembl:ENST00000353275 Ensembl:ENST00000382888
Ensembl:ENST00000382891 Ensembl:ENST00000382892
Ensembl:ENST00000382895 Ensembl:ENST00000398261
Ensembl:ENST00000420906 Ensembl:ENST00000436793
Ensembl:ENST00000503128 Ensembl:ENST00000508803
Ensembl:ENST00000512700 Ensembl:ENST00000514045 GeneID:7468
KEGG:hsa:7468 UCSC:uc003gdx.3 UCSC:uc003gdy.1 UCSC:uc003gdz.4
UCSC:uc003geg.1 UCSC:uc003geh.1 UCSC:uc003gei.4 CTD:7468
GeneCards:GC04P001840 HGNC:HGNC:12766 HPA:HPA015315 HPA:HPA015801
MIM:602952 neXtProt:NX_O96028 PharmGKB:PA37369 HOVERGEN:HBG053345
InParanoid:O96028 OMA:DVKRCVV ChiTaRS:WHSC1 GenomeRNAi:7468
NextBio:29246 ArrayExpress:O96028 Bgee:O96028 Genevestigator:O96028
GermOnline:ENSG00000109685 Uniprot:O96028
Length = 1365
Score = 129 (50.5 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 26/60 (43%), Positives = 34/60 (56%)
Query: 10 EHQDYCEVCQQGGEIILCDT--CPRAYHLCCLDPELDETPEGKWSCP--RCVSDGPPETA 65
+ +D C C GG+++LCD C +AYHL CL L + P GKW CP C G P T+
Sbjct: 1237 QSEDECFRCGDGGQLVLCDRKFCTKAYHLSCLG--LGKRPFGKWECPWHHCDVCGKPSTS 1294
Score = 118 (46.6 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 33/119 (27%), Positives = 58/119 (48%)
Query: 9 TEHQDY-CEVCQQGGEIILCD-TCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETAS 66
T ++Y C++C++ G ++LC+ C A+HL CL L PEG+++C C S G
Sbjct: 663 TAKKEYVCQLCEKPGSLLLCEGPCCGAFHLACLG--LSRRPEGRFTCSECAS-GIHSC-- 717
Query: 67 PPAEEVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPD-PIEGELPTSGWKCPKCSC 124
+C + K+ + ++ + C YH C+ P+ + G++CP SC
Sbjct: 718 ----------FVCKESKTDVKRCVVTQ-CGKFYHEACVKKYPLT-VFESRGFRCPLHSC 764
Score = 116 (45.9 bits), Expect = 5.5e-11, Sum P(2) = 5.5e-11
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 14 YCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
+C VC +GG ++ C++CP A+H CL+ E+ P+G W C C
Sbjct: 833 WCFVCSKGGSLLCCESCPAAFHPDCLNIEM---PDGSWFCNDC 872
Score = 78 (32.5 bits), Expect = 5.5e-11, Sum P(2) = 5.5e-11
Identities = 19/57 (33%), Positives = 27/57 (47%)
Query: 70 EEVKEKEVLCAKCKSPGDQFLLCET--CNGSYHPHCLPDPIEGELPTSGWKCPKCSC 124
E ++ E C +C G Q +LC+ C +YH CL G+ P W+CP C
Sbjct: 1233 EGKRQSEDECFRC-GDGGQLVLCDRKFCTKAYHLSCLG---LGKRPFGKWECPWHHC 1285
Score = 37 (18.1 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 5/7 (71%), Positives = 6/7 (85%)
Query: 120 PKCSCPP 126
PKC+C P
Sbjct: 1014 PKCNCKP 1020
>UNIPROTKB|F1MMY4 [details] [associations]
symbol:WHSC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060348 "bone development" evidence=IEA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003290 "atrial septum secundum morphogenesis" evidence=IEA]
[GO:0003289 "atrial septum primum morphogenesis" evidence=IEA]
[GO:0003149 "membranous septum morphogenesis" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR009071 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184
SMART:SM00249 SMART:SM00317 SMART:SM00570 Pfam:PF00855 Pfam:PF00505
GO:GO:0005730 GO:GO:0046872 GO:GO:0008270 GO:GO:0031965
GO:GO:0003682 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0003289 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0060348 GO:GO:0018024
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 GO:GO:0003149 GO:GO:0003290 OMA:DVKRCVV
EMBL:DAAA02018575 IPI:IPI00714897 Ensembl:ENSBTAT00000010497
Uniprot:F1MMY4
Length = 1368
Score = 131 (51.2 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 27/58 (46%), Positives = 34/58 (58%)
Query: 12 QDYCEVCQQGGEIILCD--TCPRAYHLCCLDPELDETPEGKWSCP--RCVSDGPPETA 65
+D C C GG+++LCD +C +AYHL CL L + P GKW CP C G P TA
Sbjct: 1242 EDECFRCGDGGQLVLCDRKSCTKAYHLPCLG--LGKRPFGKWECPWHHCDVCGKPSTA 1297
Score = 115 (45.5 bits), Expect = 5.5e-11, Sum P(2) = 5.5e-11
Identities = 18/43 (41%), Positives = 27/43 (62%)
Query: 14 YCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
+C VC +GG ++ C++CP A+H CL E+ P+G W C C
Sbjct: 836 WCFVCSKGGSLLCCESCPAAFHPDCLSIEM---PDGSWFCNDC 875
Score = 111 (44.1 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 34/117 (29%), Positives = 54/117 (46%)
Query: 10 EHQDYCEVCQQGGEIILCD-TCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASPP 68
EH C++C++ G ++LC+ C A+HL CL L PEG+ C C S G
Sbjct: 670 EH--VCQLCEEPGSLVLCEGPCCGAFHLACLG--LSRRPEGRLLCGECTS-GIHSC---- 720
Query: 69 AEEVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPD-PIEGELPTSGWKCPKCSC 124
+C + KS + ++ + C YH C+ P+ + G++CP SC
Sbjct: 721 --------FVCKESKSDVKRCVVSQ-CGKFYHEACVRRFPLT-VFESRGFRCPLHSC 767
Score = 79 (32.9 bits), Expect = 5.5e-11, Sum P(2) = 5.5e-11
Identities = 20/57 (35%), Positives = 27/57 (47%)
Query: 70 EEVKEKEVLCAKCKSPGDQFLLCE--TCNGSYHPHCLPDPIEGELPTSGWKCPKCSC 124
E K E C +C G Q +LC+ +C +YH CL G+ P W+CP C
Sbjct: 1236 EGKKPSEDECFRC-GDGGQLVLCDRKSCTKAYHLPCLG---LGKRPFGKWECPWHHC 1288
Score = 37 (18.1 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 5/7 (71%), Positives = 6/7 (85%)
Query: 120 PKCSCPP 126
PKC+C P
Sbjct: 1017 PKCNCKP 1023
>WB|WBGene00008081 [details] [associations]
symbol:athp-1 species:6239 "Caenorhabditis elegans"
[GO:0005509 "calcium ion binding" evidence=IEA] [GO:0005576
"extracellular region" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR000253 InterPro:IPR001965 InterPro:IPR017956
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50006 PROSITE:PS50016
SMART:SM00240 SMART:SM00249 SMART:SM00384 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0000003 Gene3D:2.60.200.20
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 eggNOG:NOG145066
EMBL:Z73424 HSSP:Q13263 PIR:T19918 RefSeq:NP_499397.2
ProteinModelPortal:Q18605 SMR:Q18605 DIP:DIP-27259N IntAct:Q18605
MINT:MINT-1045880 STRING:Q18605 PaxDb:Q18605 EnsemblMetazoa:C44B9.4
GeneID:176517 KEGG:cel:CELE_C44B9.4 UCSC:C44B9.4 CTD:176517
WormBase:C44B9.4 GeneTree:ENSGT00530000069671 HOGENOM:HOG000021274
InParanoid:Q18605 OMA:IAIQRCL NextBio:892916 Uniprot:Q18605
Length = 1150
Score = 125 (49.1 bits), Expect = 5.9e-11, Sum P(2) = 5.9e-11
Identities = 24/68 (35%), Positives = 33/68 (48%)
Query: 15 CEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRC------VSDGPPETASPP 68
C +C GG I+ C+ CP ++HL C+ E + P+ + C RC V PPE SP
Sbjct: 62 CGICSSGGNILCCEQCPASFHLACIGYESSDLPDDNFYCNRCRNLPENVRLFPPEKCSPS 121
Query: 69 AEEVKEKE 76
V E
Sbjct: 122 VNPVLRVE 129
Score = 67 (28.6 bits), Expect = 5.9e-11, Sum P(2) = 5.9e-11
Identities = 13/46 (28%), Positives = 22/46 (47%)
Query: 78 LCAKCKSPGD--QFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPK 121
+CA+C D + L C+ C+ +H C+ P+ W CP+
Sbjct: 220 VCAECNLKDDWTRMLKCDFCDLIWHQKCVTPPLIHVRAYFYWMCPR 265
>UNIPROTKB|Q18605 [details] [associations]
symbol:athp-1 "Protein ATHP-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000253 InterPro:IPR001965 InterPro:IPR017956
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50006 PROSITE:PS50016
SMART:SM00240 SMART:SM00249 SMART:SM00384 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0000003 Gene3D:2.60.200.20
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 eggNOG:NOG145066
EMBL:Z73424 HSSP:Q13263 PIR:T19918 RefSeq:NP_499397.2
ProteinModelPortal:Q18605 SMR:Q18605 DIP:DIP-27259N IntAct:Q18605
MINT:MINT-1045880 STRING:Q18605 PaxDb:Q18605 EnsemblMetazoa:C44B9.4
GeneID:176517 KEGG:cel:CELE_C44B9.4 UCSC:C44B9.4 CTD:176517
WormBase:C44B9.4 GeneTree:ENSGT00530000069671 HOGENOM:HOG000021274
InParanoid:Q18605 OMA:IAIQRCL NextBio:892916 Uniprot:Q18605
Length = 1150
Score = 125 (49.1 bits), Expect = 5.9e-11, Sum P(2) = 5.9e-11
Identities = 24/68 (35%), Positives = 33/68 (48%)
Query: 15 CEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRC------VSDGPPETASPP 68
C +C GG I+ C+ CP ++HL C+ E + P+ + C RC V PPE SP
Sbjct: 62 CGICSSGGNILCCEQCPASFHLACIGYESSDLPDDNFYCNRCRNLPENVRLFPPEKCSPS 121
Query: 69 AEEVKEKE 76
V E
Sbjct: 122 VNPVLRVE 129
Score = 67 (28.6 bits), Expect = 5.9e-11, Sum P(2) = 5.9e-11
Identities = 13/46 (28%), Positives = 22/46 (47%)
Query: 78 LCAKCKSPGD--QFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPK 121
+CA+C D + L C+ C+ +H C+ P+ W CP+
Sbjct: 220 VCAECNLKDDWTRMLKCDFCDLIWHQKCVTPPLIHVRAYFYWMCPR 265
>UNIPROTKB|B1AHC5 [details] [associations]
symbol:PHF21B "cDNA FLJ34161 fis, clone FCBBF3014229,
highly similar to PHD finger protein 21B" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 EMBL:CH471138
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 HOVERGEN:HBG080293 HOGENOM:HOG000231466
EMBL:AL049760 EMBL:Z83838 RefSeq:NP_001229379.1 UniGene:Hs.254097
DNASU:112885 GeneID:112885 KEGG:hsa:112885 CTD:112885
HGNC:HGNC:25161 ChiTaRS:PHF21B GenomeRNAi:112885 NextBio:78697
EMBL:AL079301 EMBL:AK091480 IPI:IPI00893566 SMR:B1AHC5
Ensembl:ENST00000403565 UCSC:uc003bfm.3 Uniprot:B1AHC5
Length = 327
Score = 156 (60.0 bits), Expect = 7.5e-11, P = 7.5e-11
Identities = 23/46 (50%), Positives = 30/46 (65%)
Query: 11 HQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
H ++C C++G + C TCP AYHL CL+P L P+G W CPRC
Sbjct: 147 HDEHCAACKRGANLQPCGTCPGAYHLSCLEPPLKTAPKGVWVCPRC 192
Score = 101 (40.6 bits), Expect = 9.9e-05, Sum P(2) = 9.9e-05
Identities = 19/44 (43%), Positives = 23/44 (52%)
Query: 79 CAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC 122
CA CK G C TC G+YH CL P++ P W CP+C
Sbjct: 151 CAACKR-GANLQPCGTCPGAYHLSCLEPPLK-TAPKGVWVCPRC 192
Score = 34 (17.0 bits), Expect = 9.9e-05, Sum P(2) = 9.9e-05
Identities = 7/27 (25%), Positives = 12/27 (44%)
Query: 41 PELDETPEGKWSCPRCVSDGPPETASP 67
P +E +G + + D PP +P
Sbjct: 46 PPTEEPSQGAQATKKKKEDRPPTQENP 72
>FB|FBgn0033636 [details] [associations]
symbol:tou "toutatis" species:7227 "Drosophila melanogaster"
[GO:0006338 "chromatin remodeling" evidence=NAS] [GO:0003682
"chromatin binding" evidence=NAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007399 "nervous system development" evidence=IMP] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0008134 "transcription factor binding"
evidence=IPI] InterPro:IPR001487 InterPro:IPR001739
InterPro:IPR001876 InterPro:IPR001965 InterPro:IPR016177
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01429
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50982
SMART:SM00249 SMART:SM00297 SMART:SM00547 EMBL:AE013599
GO:GO:0005634 GO:GO:0007399 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0045944 SUPFAM:SSF54171 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR004022 InterPro:IPR018501
Pfam:PF02791 PROSITE:PS50827 GeneTree:ENSGT00660000095335
Gene3D:3.30.890.10 UniGene:Dm.2658 GeneID:36241
KEGG:dme:Dmel_CG10897 CTD:36241 FlyBase:FBgn0033636
GenomeRNAi:36241 NextBio:797507 RefSeq:NP_001097270.1
ProteinModelPortal:A8DYA3 SMR:A8DYA3 STRING:A8DYA3
EnsemblMetazoa:FBtr0113066 UCSC:CG10897-RE OMA:GRHTTLL
PhylomeDB:A8DYA3 Bgee:A8DYA3 Uniprot:A8DYA3
Length = 3131
Score = 169 (64.5 bits), Expect = 7.9e-11, P = 7.9e-11
Identities = 37/121 (30%), Positives = 56/121 (46%)
Query: 15 CEVCQQG---GEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASPPAEE 71
C+ C G +++LCD C + YH C P++D P+G W C CV+ E
Sbjct: 2641 CQFCTSGENEDKLLLCDGCDKGYHTYCFKPKMDNIPDGDWYCYECVNKATNE-------- 2692
Query: 72 VKEKEVLCAKCK-SPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC-SCPPLPG 129
K ++C + SP + + C+ C +YH C P+ ++P W C C S P P
Sbjct: 2693 --RKCIVCGGHRPSPVGKMIYCDLCPRAYHADCYIPPLL-KVPRGKWYCHGCISRAPPPK 2749
Query: 130 K 130
K
Sbjct: 2750 K 2750
>RGD|1307955 [details] [associations]
symbol:Whsc1 "Wolf-Hirschhorn syndrome candidate 1"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003149 "membranous septum morphogenesis" evidence=ISO]
[GO:0003289 "atrial septum primum morphogenesis" evidence=ISO]
[GO:0003290 "atrial septum secundum morphogenesis" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0016568 "chromatin modification" evidence=ISO]
[GO:0018022 "peptidyl-lysine methylation" evidence=ISO] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=ISO]
[GO:0031965 "nuclear membrane" evidence=ISO] [GO:0034968 "histone
lysine methylation" evidence=ISO] [GO:0060348 "bone development"
evidence=ISO] REFSEQ:NM_001191552 Ncbi:NP_001178481
Length = 1346
Score = 129 (50.5 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 26/60 (43%), Positives = 34/60 (56%)
Query: 10 EHQDYCEVCQQGGEIILCDT--CPRAYHLCCLDPELDETPEGKWSCP--RCVSDGPPETA 65
+ +D C C GG+++LCD C +AYHL CL L + P GKW CP C G P T+
Sbjct: 1218 QSEDECFRCGDGGQLVLCDRKFCTKAYHLSCLG--LGKRPFGKWECPWHHCDVCGKPSTS 1275
Score = 120 (47.3 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 32/116 (27%), Positives = 55/116 (47%)
Query: 12 QDY-CEVCQQGGEIILCD-TCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASPPA 69
++Y C++C++ G ++LC+ C A+HL CL L + PEG+++C C S
Sbjct: 647 KEYVCQLCEKTGSLLLCEGPCCGAFHLACLG--LSQRPEGRFTCTECAS------GIHSC 698
Query: 70 EEVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPD-PIEGELPTSGWKCPKCSC 124
KE ++ +C + C YH C+ P+ + G++CP SC
Sbjct: 699 FVCKESKMEVKRC--------MVNQCGKFYHEACVKKYPLT-VFESRGFRCPLHSC 745
Score = 114 (45.2 bits), Expect = 8.6e-11, Sum P(2) = 8.6e-11
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 14 YCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
+C VC +GG ++ C+ CP A+H CL E+ P+G W C C
Sbjct: 814 WCFVCSKGGSLLCCEACPAAFHPDCLSIEM---PDGSWFCNDC 853
Score = 78 (32.5 bits), Expect = 8.6e-11, Sum P(2) = 8.6e-11
Identities = 19/57 (33%), Positives = 27/57 (47%)
Query: 70 EEVKEKEVLCAKCKSPGDQFLLCET--CNGSYHPHCLPDPIEGELPTSGWKCPKCSC 124
E ++ E C +C G Q +LC+ C +YH CL G+ P W+CP C
Sbjct: 1214 EGKRQSEDECFRC-GDGGQLVLCDRKFCTKAYHLSCLG---LGKRPFGKWECPWHHC 1266
Score = 37 (18.1 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 5/7 (71%), Positives = 6/7 (85%)
Query: 120 PKCSCPP 126
PKC+C P
Sbjct: 995 PKCNCKP 1001
>RGD|1583154 [details] [associations]
symbol:LOC686349 "similar to Wolf-Hirschhorn syndrome candidate
1 protein isoform 3" species:10116 "Rattus norvegicus" [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0003149 "membranous septum
morphogenesis" evidence=IEA] [GO:0003289 "atrial septum primum
morphogenesis" evidence=IEA] [GO:0003290 "atrial septum secundum
morphogenesis" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0060348 "bone development"
evidence=IEA] InterPro:IPR001841 Pfam:PF00856 InterPro:IPR009071
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR006560
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50089
PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00570 Pfam:PF00855 Pfam:PF00505 RGD:1583154
GO:GO:0005730 GO:GO:0046872 GO:GO:0008270 GO:GO:0031965
GO:GO:0003682 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0003289 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0060348 GO:GO:0018024
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 GO:GO:0003149 GO:GO:0003290 IPI:IPI00779496
Ensembl:ENSRNOT00000021952 OrthoDB:EOG4V6ZFW ArrayExpress:D4A9J4
Uniprot:D4A9J4
Length = 1366
Score = 129 (50.5 bits), Expect = 5.6e-07, P = 5.6e-07
Identities = 26/60 (43%), Positives = 34/60 (56%)
Query: 10 EHQDYCEVCQQGGEIILCDT--CPRAYHLCCLDPELDETPEGKWSCP--RCVSDGPPETA 65
+ +D C C GG+++LCD C +AYHL CL L + P GKW CP C G P T+
Sbjct: 1238 QSEDECFRCGDGGQLVLCDRKFCTKAYHLSCLG--LGKRPFGKWECPWHHCDVCGKPSTS 1295
Score = 120 (47.3 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 32/116 (27%), Positives = 55/116 (47%)
Query: 12 QDY-CEVCQQGGEIILCD-TCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASPPA 69
++Y C++C++ G ++LC+ C A+HL CL L + PEG+++C C S
Sbjct: 667 KEYVCQLCEKTGSLLLCEGPCCGAFHLACLG--LSQRPEGRFTCTECAS------GIHSC 718
Query: 70 EEVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPD-PIEGELPTSGWKCPKCSC 124
KE ++ +C + C YH C+ P+ + G++CP SC
Sbjct: 719 FVCKESKMEVKRC--------MVNQCGKFYHEACVKKYPLT-VFESRGFRCPLHSC 765
Score = 114 (45.2 bits), Expect = 8.9e-11, Sum P(2) = 8.9e-11
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 14 YCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
+C VC +GG ++ C+ CP A+H CL E+ P+G W C C
Sbjct: 834 WCFVCSKGGSLLCCEACPAAFHPDCLSIEM---PDGSWFCNDC 873
Score = 78 (32.5 bits), Expect = 8.9e-11, Sum P(2) = 8.9e-11
Identities = 19/57 (33%), Positives = 27/57 (47%)
Query: 70 EEVKEKEVLCAKCKSPGDQFLLCET--CNGSYHPHCLPDPIEGELPTSGWKCPKCSC 124
E ++ E C +C G Q +LC+ C +YH CL G+ P W+CP C
Sbjct: 1234 EGKRQSEDECFRC-GDGGQLVLCDRKFCTKAYHLSCLG---LGKRPFGKWECPWHHC 1286
Score = 37 (18.1 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
Identities = 5/7 (71%), Positives = 6/7 (85%)
Query: 120 PKCSCPP 126
PKC+C P
Sbjct: 1015 PKCNCKP 1021
>UNIPROTKB|F1N7W5 [details] [associations]
symbol:LOC788840 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 OMA:SDKQALG
GeneTree:ENSGT00530000063984 EMBL:DAAA02014921 IPI:IPI00842008
Ensembl:ENSBTAT00000042589 Uniprot:F1N7W5
Length = 501
Score = 159 (61.0 bits), Expect = 8.9e-11, P = 8.9e-11
Identities = 24/46 (52%), Positives = 30/46 (65%)
Query: 11 HQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
H + C C++G + C TCPRAYHL CLDP L P+G W CP+C
Sbjct: 321 HDELCAACKRGTNLQPCGTCPRAYHLSCLDPPLKTAPKGVWVCPKC 366
Score = 103 (41.3 bits), Expect = 0.00049, P = 0.00049
Identities = 22/52 (42%), Positives = 26/52 (50%)
Query: 71 EVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC 122
E+ E LCA CK G C TC +YH CL P++ P W CPKC
Sbjct: 318 EITHDE-LCAACKR-GTNLQPCGTCPRAYHLSCLDPPLK-TAPKGVWVCPKC 366
>UNIPROTKB|H9KZW6 [details] [associations]
symbol:H9KZW6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0033148 "positive regulation of intracellular
estrogen receptor signaling pathway" evidence=IEA] [GO:0035097
"histone methyltransferase complex" evidence=IEA] [GO:0043627
"response to estrogen stimulus" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GeneTree:ENSGT00690000101661
EMBL:AADN02067269 EMBL:AADN02067270 Ensembl:ENSGALT00000020812
OMA:ELLPCEL Uniprot:H9KZW6
Length = 725
Score = 126 (49.4 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 24/56 (42%), Positives = 30/56 (53%)
Query: 15 CEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASP 67
CEVC + + ++LCD C +YH CLDP L P+G W C CV ASP
Sbjct: 667 CEVCGKASDPSRLLLCDDCDISYHTYCLDPPLQTVPKGGWKCKWCVCCVQCGAASP 722
Score = 120 (47.3 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 78 LCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKCSC 124
+C K P + LLC+ C+ SYH +CL P++ +P GWKC C C
Sbjct: 669 VCGKASDPS-RLLLCDDCDISYHTYCLDPPLQ-TVPKGGWKCKWCVC 713
Score = 101 (40.6 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 21/65 (32%), Positives = 30/65 (46%)
Query: 78 LCAKCKSPG----DQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKCSCPPLPGKLED 133
+C C S G L C C+ YHP+C+ I + GW+C +C + GK D
Sbjct: 616 MCVVCGSFGRGAEGHLLACSQCSQCYHPYCVNSKITKVMLLKGWRCVECIVCEVCGKASD 675
Query: 134 MASLL 138
+ LL
Sbjct: 676 PSRLL 680
Score = 65 (27.9 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 21/59 (35%), Positives = 27/59 (45%)
Query: 28 DTCPRAYHLCCLDPELDETPEGKWSCPRCV-----SDGPPETAS--PPAEEVK-EKEVL 78
+ CP C L E D P GKW P + ++ PE A PP EE++ E E L
Sbjct: 206 ELCPEELLPCELPAEEDPKPPGKWGPPGLLPEVAAAEEAPELAPEVPPEEEMELEPEPL 264
Score = 46 (21.3 bits), Expect = 9.6e-09, Sum P(2) = 9.6e-09
Identities = 15/44 (34%), Positives = 21/44 (47%)
Query: 40 DPELDETPEGKWSCP-RCVSDGPPETA----SPPAEEVKEKEVL 78
+P +DE P K + + + PPE PP E EKE+L
Sbjct: 100 EPPVDEMPPEKPPLDEQHLEEQPPEKPPLDEQPPIELPSEKELL 143
Score = 38 (18.4 bits), Expect = 6.4e-08, Sum P(2) = 6.4e-08
Identities = 11/36 (30%), Positives = 14/36 (38%)
Query: 39 LDPELDETPEGKWSCPRCVSDGPPETASPPAEEVKE 74
+D E +P P C P A PP +E E
Sbjct: 296 MDTEPPGSPPPPLGSPACT----PAPAEPPEDEEME 327
Score = 35 (17.4 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 41 PELDETPEGKWSCPRCVSDGPPETASPPAEE 71
PE +E E + PR +G ++ P +EE
Sbjct: 359 PEEEEEEEEE--APRLEREGTSGSSPPLSEE 387
Score = 33 (16.7 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 13/44 (29%), Positives = 18/44 (40%)
Query: 41 PELDETPEGKWSCPRCVSDG--PPETASP-----PAEEVKEKEV 77
P L E P + G PP SP PAE +++E+
Sbjct: 283 PALPEPPRSPGTAMDTEPPGSPPPPLGSPACTPAPAEPPEDEEM 326
>POMBASE|SPBP19A11.06 [details] [associations]
symbol:lid2 "Lid2 complex subunit, predicted histone
demethylase Lid2" species:4896 "Schizosaccharomyces pombe"
[GO:0000070 "mitotic sister chromatid segregation" evidence=IMP]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016706
"oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0019787 "small conjugating protein ligase
activity" evidence=ISM] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IMP] [GO:0030702 "chromatin
silencing at centromere" evidence=IMP] [GO:0031507 "heterochromatin
assembly" evidence=IMP] [GO:0031618 "nuclear centromeric
heterochromatin" evidence=IDA] [GO:0031934 "mating-type region
heterochromatin" evidence=IDA] [GO:0034630 "RITS complex
localization" evidence=IMP] [GO:0034647 "histone demethylase
activity (H3-trimethyl-K4 specific)" evidence=IDA] [GO:0048189
"Lid2 complex" evidence=IDA] [GO:0051567 "histone H3-K9
methylation" evidence=IMP] [GO:0051572 "negative regulation of
histone H3-K4 methylation" evidence=IMP] InterPro:IPR001841
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51011 PROSITE:PS51184
SMART:SM00184 SMART:SM00249 SMART:SM00558 PomBase:SPBP19A11.06
Prosite:PS00518 GO:GO:0046872 GO:GO:0003677 EMBL:CU329671
GO:GO:0008270 GO:GO:0006351 GenomeReviews:CU329671_GR GO:GO:0030466
GO:GO:0030702 GO:GO:0000070 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0031934 GO:GO:0051567
Gene3D:1.10.150.60 SUPFAM:SSF46774 GO:GO:0048189 GO:GO:0019787
GO:GO:0031507 GO:GO:0051572 GO:GO:0031618 PROSITE:PS51183
GO:GO:0034630 eggNOG:NOG327026 GO:GO:0034647 OrthoDB:EOG44N21B
KO:K11446 PIR:T50313 RefSeq:NP_596174.1 ProteinModelPortal:Q9HDV4
IntAct:Q9HDV4 STRING:Q9HDV4 EnsemblFungi:SPBP19A11.06.1
GeneID:2541299 KEGG:spo:SPBP19A11.06 OMA:LPCVIRE NextBio:20802409
Uniprot:Q9HDV4
Length = 1513
Score = 119 (46.9 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 23/56 (41%), Positives = 29/56 (51%)
Query: 10 EHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRC---VSDGPP 62
E +YC + + I+LCD C AYH CLDP L P+ W C C +SD P
Sbjct: 269 EQCEYCGLDKNPETILLCDGCEAAYHTSCLDPPLTSIPKEDWYCDACKFNISDYDP 324
Score = 73 (30.8 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 30/97 (30%), Positives = 44/97 (45%)
Query: 60 GPP-ETAS----PPAE---EVKEKE--VLCAKCKSPGDQFLL-CETCNGSYHPHCLPDPI 108
GPP E AS P +E +++K+ + C C+ P ++ CE C+ YH CL
Sbjct: 1070 GPPMEPASRETSPDSEGRLTIRKKKGCIFCF-CRLPESGVMIECEICHEWYHAKCLKMSK 1128
Query: 109 EGELPTSGWKCPKCS----CPPLPG--KLEDMASLLR 139
+ + CP C P L KLED+ SL +
Sbjct: 1129 KKLRQDEKFTCPICDYRVEIPRLSNRPKLEDLQSLYK 1165
Score = 71 (30.1 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 19/53 (35%), Positives = 24/53 (45%)
Query: 72 VKEKE--VLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC 122
VKEK LC + SP D F+ C C +H C+ E S + CP C
Sbjct: 1348 VKEKNSSCLCGEEFSPRDSFIDCTICERRFHYDCVGLNNEIADSVSKFTCPIC 1400
Score = 52 (23.4 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 20/70 (28%), Positives = 28/70 (40%)
Query: 76 EVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPI-EGELPTSGWKC-PKCSCPPLPGKLED 133
E+ C+ CK P FL C+ CL D + E L + W + L E
Sbjct: 643 EIRCSNCKQPC--FLSFMQCHEPKKFICLGDCVKEVSLNATSWMLFYRWDVHELSNLAER 700
Query: 134 MASLLRLPRQ 143
SL+R P +
Sbjct: 701 FVSLIRGPEE 710
>UNIPROTKB|F1SJU8 [details] [associations]
symbol:PHF21B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 OMA:SDKQALG
GeneTree:ENSGT00530000063984 EMBL:CU633627
Ensembl:ENSSSCT00000000021 Uniprot:F1SJU8
Length = 450
Score = 157 (60.3 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 23/46 (50%), Positives = 30/46 (65%)
Query: 11 HQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
H ++C C++G + C TCP AYHL CLDP L P+G W CP+C
Sbjct: 270 HDEHCATCKRGANLQPCGTCPGAYHLSCLDPPLKTAPKGVWVCPKC 315
Score = 104 (41.7 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 20/44 (45%), Positives = 23/44 (52%)
Query: 79 CAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC 122
CA CK G C TC G+YH CL P++ P W CPKC
Sbjct: 274 CATCKR-GANLQPCGTCPGAYHLSCLDPPLK-TAPKGVWVCPKC 315
Score = 37 (18.1 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 7/27 (25%), Positives = 12/27 (44%)
Query: 41 PELDETPEGKWSCPRCVSDGPPETASP 67
P +E +G + + D PP +P
Sbjct: 169 PPTEEPSQGAQATKKKTEDRPPSQENP 195
>ZFIN|ZDB-GENE-080519-2 [details] [associations]
symbol:nsd1b "nuclear receptor binding SET domain
protein 1b" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0032259 "methylation" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215
SMART:SM00249 SMART:SM00317 SMART:SM00570 Pfam:PF00855
ZFIN:ZDB-GENE-080519-2 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024
GO:GO:0034968 InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 EMBL:BX842703 IPI:IPI00488658
Ensembl:ENSDART00000131188 Bgee:F1Q9U9 Uniprot:F1Q9U9
Length = 1873
Score = 130 (50.8 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 40/118 (33%), Positives = 58/118 (49%)
Query: 5 QDLQTEHQDYCEVCQQGGEIILCDT--CPRAYHLCCLDPELDETPEGKWSCP--RCVSDG 60
Q++ E +D C C GG+I+ C CP+ YH CL+ L + P G+W CP +C G
Sbjct: 1659 QEVIKEREDECFSCGDGGQIVSCKRPGCPKVYHADCLN--LTKRPAGRWECPWHQCDLCG 1716
Query: 61 PPETAS-----PPAEEVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIE-GEL 112
E AS P + V+ ++ + K G L C S H C P+P+E GE+
Sbjct: 1717 Q-EAASFCEMCPSSYCVEHRDGMLFISKLDGR--LSC-----SEHDPCGPEPLEPGEI 1766
Score = 119 (46.9 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 21/55 (38%), Positives = 33/55 (60%)
Query: 10 EHQD--YCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPP 62
EH + +C VC +GG ++ C++CP A+H CL+ ++ PEG W C C + P
Sbjct: 1256 EHVNVSWCFVCSEGGSLLCCESCPAAFHRECLNIDM---PEGSWYCNDCRAGKKP 1307
Score = 74 (31.1 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 19/57 (33%), Positives = 25/57 (43%)
Query: 70 EEVKEKEVLCAKCKSPGDQFLLCET--CNGSYHPHCLPDPIEGELPTSGWKCPKCSC 124
E +KE+E C C G Q + C+ C YH CL + P W+CP C
Sbjct: 1660 EVIKEREDECFSC-GDGGQIVSCKRPGCPKVYHADCLNLT---KRPAGRWECPWHQC 1712
>UNIPROTKB|E1C765 [details] [associations]
symbol:WHSC1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0003149 "membranous septum
morphogenesis" evidence=IEA] [GO:0003289 "atrial septum primum
morphogenesis" evidence=IEA] [GO:0003290 "atrial septum secundum
morphogenesis" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IEA]
[GO:0031965 "nuclear membrane" evidence=IEA] [GO:0060348 "bone
development" evidence=IEA] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR009071 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184
SMART:SM00249 SMART:SM00317 SMART:SM00570 Pfam:PF00855 Pfam:PF00505
GO:GO:0005730 GO:GO:0046872 GO:GO:0008270 GO:GO:0031965
GO:GO:0003682 GO:GO:0000122 Gene3D:1.10.30.10 SMART:SM00398
SUPFAM:SSF47095 PROSITE:PS50118 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 OMA:DVKRCVV
EMBL:AADN02014946 IPI:IPI00588925 Ensembl:ENSGALT00000025327
Uniprot:E1C765
Length = 1372
Score = 123 (48.4 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 25/60 (41%), Positives = 32/60 (53%)
Query: 10 EHQDYCEVCQQGGEIILCD--TCPRAYHLCCLDPELDETPEGKWSCP--RCVSDGPPETA 65
E +D C C GG+++LCD +C +AYHL CLD GKW CP C G P +
Sbjct: 1243 ESEDDCFRCGDGGQLVLCDRKSCTKAYHLSCLDLAKRPFVIGKWECPWHHCDVCGKPSVS 1302
Score = 114 (45.2 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 32/117 (27%), Positives = 53/117 (45%)
Query: 9 TEHQDYCEVCQQGGEIILCD-TCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASP 67
T+ + C++C++ G+++LC+ C RA+H+ CL L P GK+ C C S T
Sbjct: 669 TKKEYVCQLCEKTGDLLLCEGLCYRAFHVSCLG--LSGRPAGKFVCSECTSG--VHTCFV 724
Query: 68 PAEEVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKCSC 124
KE++ +C + C YH C+ + G++CP SC
Sbjct: 725 ----CKERKADLKRC--------VVSHCGKFYHEACVKKFHLTVFESRGFRCPLHSC 769
Score = 109 (43.4 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 14 YCEVC-QQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
+C VC ++GG ++ C++CP A+H CL+ E+ P+G W C C
Sbjct: 838 WCFVCSKEGGSLLCCESCPAAFHPDCLNIEM---PDGSWYCNDC 878
Score = 81 (33.6 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 20/57 (35%), Positives = 27/57 (47%)
Query: 70 EEVKEKEVLCAKCKSPGDQFLLCE--TCNGSYHPHCLPDPIEGELPTSGWKCPKCSC 124
E KE E C +C G Q +LC+ +C +YH CL D + W+CP C
Sbjct: 1239 EGKKESEDDCFRC-GDGGQLVLCDRKSCTKAYHLSCL-DLAKRPFVIGKWECPWHHC 1293
Score = 37 (18.1 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 5/7 (71%), Positives = 6/7 (85%)
Query: 120 PKCSCPP 126
PKC+C P
Sbjct: 1020 PKCNCKP 1026
>UNIPROTKB|Q96EK2 [details] [associations]
symbol:PHF21B "PHD finger protein 21B" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 EMBL:CH471138
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS01359 HOVERGEN:HBG080293
HOGENOM:HOG000231466 EMBL:CR456448 EMBL:AK092243 EMBL:AK297317
EMBL:AL049760 EMBL:Z83838 EMBL:BC012187 IPI:IPI00738578
IPI:IPI00739761 IPI:IPI01009331 RefSeq:NP_001129334.1
RefSeq:NP_001229379.1 RefSeq:NP_612424.1 UniGene:Hs.254097
ProteinModelPortal:Q96EK2 SMR:Q96EK2 PhosphoSite:Q96EK2
DMDM:74731574 PRIDE:Q96EK2 DNASU:112885 Ensembl:ENST00000313237
Ensembl:ENST00000396103 Ensembl:ENST00000404079 GeneID:112885
KEGG:hsa:112885 UCSC:uc003bfn.3 UCSC:uc011aql.2 CTD:112885
GeneCards:GC22M045277 HGNC:HGNC:25161 neXtProt:NX_Q96EK2
PharmGKB:PA134872136 eggNOG:NOG291382 InParanoid:Q96EK2 OMA:SDKQALG
OrthoDB:EOG4P2Q2F PhylomeDB:Q96EK2 ChiTaRS:PHF21B GenomeRNAi:112885
NextBio:78697 ArrayExpress:Q96EK2 Bgee:Q96EK2 CleanEx:HS_PHF21B
Genevestigator:Q96EK2 GermOnline:ENSG00000056487 Uniprot:Q96EK2
Length = 531
Score = 156 (60.0 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 23/46 (50%), Positives = 30/46 (65%)
Query: 11 HQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
H ++C C++G + C TCP AYHL CL+P L P+G W CPRC
Sbjct: 351 HDEHCAACKRGANLQPCGTCPGAYHLSCLEPPLKTAPKGVWVCPRC 396
Score = 101 (40.6 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 19/44 (43%), Positives = 23/44 (52%)
Query: 79 CAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC 122
CA CK G C TC G+YH CL P++ P W CP+C
Sbjct: 355 CAACKR-GANLQPCGTCPGAYHLSCLEPPLK-TAPKGVWVCPRC 396
Score = 34 (17.0 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 7/27 (25%), Positives = 12/27 (44%)
Query: 41 PELDETPEGKWSCPRCVSDGPPETASP 67
P +E +G + + D PP +P
Sbjct: 250 PPTEEPSQGAQATKKKKEDRPPTQENP 276
>MGI|MGI:2152406 [details] [associations]
symbol:Trim66 "tripartite motif-containing 66" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0010369 "chromocenter" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119 SMART:SM00249
SMART:SM00297 SMART:SM00502 MGI:MGI:2152406 GO:GO:0005634
GO:GO:0045892 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076 GO:GO:0010369
EMBL:AJ307670 GeneTree:ENSGT00530000062982 CTD:9866
HOGENOM:HOG000074104 HOVERGEN:HBG057849 KO:K12032 EMBL:AY572455
EMBL:AC124457 IPI:IPI00776191 IPI:IPI00853877 RefSeq:NP_862901.3
UniGene:Mm.183528 ProteinModelPortal:Q924W6 SMR:Q924W6
STRING:Q924W6 PhosphoSite:Q924W6 PRIDE:Q924W6
Ensembl:ENSMUST00000033339 GeneID:330627 KEGG:mmu:330627
InParanoid:Q924W6 NextBio:399482 Bgee:Q924W6 CleanEx:MM_TRIM66
Genevestigator:Q924W6 Uniprot:Q924W6
Length = 1242
Score = 154 (59.3 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 26/54 (48%), Positives = 33/54 (61%)
Query: 10 EHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPE 63
E++D+C VC GGE++ CD CP+ YHL C P L P G+W C C S PE
Sbjct: 994 ENEDFCAVCINGGELLCCDRCPKVYHLSCHVPALLSFPGGEWVCTLCRSLTQPE 1047
Score = 33 (16.7 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 5/21 (23%), Positives = 10/21 (47%)
Query: 105 PDPIEGELPTSGWKCPKCSCP 125
P+ + ++ W C K + P
Sbjct: 1131 PEEVVSDVRLMFWNCAKFNYP 1151
>ZFIN|ZDB-GENE-030131-2773 [details] [associations]
symbol:trim33 "tripartite motif-containing 33"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0033333
"fin development" evidence=IMP] [GO:0030218 "erythrocyte
differentiation" evidence=IGI;IMP] [GO:0034243 "regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IGI] [GO:0035162 "embryonic hemopoiesis" evidence=IMP]
[GO:0035166 "post-embryonic hemopoiesis" evidence=IMP] [GO:0060215
"primitive hemopoiesis" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00249 SMART:SM00297 SMART:SM00336
SMART:SM00502 Prosite:PS00518 ZFIN:ZDB-GENE-030131-2773
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 GO:GO:0030218
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR017907 Gene3D:1.20.920.10 SUPFAM:SSF47370 GO:GO:0034243
GO:GO:0035166 GO:GO:0060215 HOGENOM:HOG000252971 HOVERGEN:HBG054599
GeneTree:ENSGT00530000062982 CTD:51592 KO:K08883 GO:GO:0033333
EMBL:BX321886 IPI:IPI00512685 RefSeq:NP_001002871.2
UniGene:Dr.80165 SMR:B0S5U2 Ensembl:ENSDART00000020116
GeneID:324053 KEGG:dre:324053 NextBio:20808565 Uniprot:B0S5U2
Length = 1176
Score = 160 (61.4 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 38/110 (34%), Positives = 52/110 (47%)
Query: 11 HQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETA----- 65
++D+C VCQ GGE++ CD CP+ +H+ C P L +P G W C C + PE
Sbjct: 933 NEDWCAVCQNGGELLCCDHCPKVFHITCHIPTLKSSPSGDWMCTFCRNLANPEIEYNCDD 992
Query: 66 SPPAEEVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTS 115
PP KEK + SP +Q CE H L + +PTS
Sbjct: 993 DPPRN--KEKNEMAM---SPEEQ-RRCERLLLHVFCHELSTEFQEPVPTS 1036
>RGD|1595847 [details] [associations]
symbol:Trim66 "tripartite motif-containing 66" species:10116
"Rattus norvegicus" [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0010369 "chromocenter" evidence=ISO] [GO:0016235
"aggresome" evidence=ISO] [GO:0042803 "protein homodimerization
activity" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR000315 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR003649 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF00643 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50119 SMART:SM00249 SMART:SM00297
SMART:SM00336 SMART:SM00502 RGD:1595847 GO:GO:0005634 GO:GO:0045892
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0016235 Gene3D:1.20.920.10 SUPFAM:SSF47370
GO:GO:0010369 GeneTree:ENSGT00530000062982 IPI:IPI00366002
PRIDE:F1M6Z0 Ensembl:ENSRNOT00000019368 UCSC:RGD:1595847
NextBio:676966 ArrayExpress:F1M6Z0 Uniprot:F1M6Z0
Length = 1307
Score = 154 (59.3 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 26/54 (48%), Positives = 33/54 (61%)
Query: 10 EHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPE 63
E++D+C VC GGE++ CD CP+ YHL C P L P G+W C C S PE
Sbjct: 1059 ENEDFCAVCINGGELLCCDRCPKVYHLSCHVPALLSFPGGEWVCTLCRSLTQPE 1112
Score = 33 (16.7 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 5/21 (23%), Positives = 10/21 (47%)
Query: 105 PDPIEGELPTSGWKCPKCSCP 125
P+ + ++ W C K + P
Sbjct: 1196 PEEVVSDVRLMFWNCAKFNYP 1216
>UNIPROTKB|F1LWS6 [details] [associations]
symbol:F1LWS6 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR004022
InterPro:IPR018500 InterPro:IPR018501 Pfam:PF02791 SMART:SM00571
PROSITE:PS50827 IPI:IPI00209838 Ensembl:ENSRNOT00000020980
ArrayExpress:F1LWS6 Uniprot:F1LWS6
Length = 822
Score = 158 (60.7 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 10 EHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASPPA 69
++ D+C VC + G+++ C+TC YHL C+ P L+E PE +W C CV+ P A
Sbjct: 279 QYDDHCRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVCVAHKVPGVTDCVA 338
Query: 70 EEVKEK 75
E K K
Sbjct: 339 EVQKNK 344
Score = 118 (46.6 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 24/69 (34%), Positives = 36/69 (52%)
Query: 69 AEEVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKCSCPPLP 128
+E V + + C C GD L CETC+ YH C+ P+E E+P W+C C +P
Sbjct: 274 SEGVIQYDDHCRVCHKLGD-LLCCETCSAVYHLECVKPPLE-EVPEDEWQCEVCVAHKVP 331
Query: 129 GKLEDMASL 137
G + +A +
Sbjct: 332 GVTDCVAEV 340
>UNIPROTKB|J3QQU3 [details] [associations]
symbol:PHF12 "PHD finger protein 12" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 EMBL:AC024267 HGNC:HGNC:20816
ChiTaRS:PHF12 ProteinModelPortal:J3QQU3 Ensembl:ENST00000583524
Uniprot:J3QQU3
Length = 129
Score = 146 (56.5 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 24/50 (48%), Positives = 33/50 (66%)
Query: 9 TEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDET--PEGKWSCPRC 56
T H D C+ C++GG+++ CD CP A+HL C +P L E P G+W C RC
Sbjct: 54 TNH-DSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRC 102
Score = 95 (38.5 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 17/46 (36%), Positives = 23/46 (50%)
Query: 79 CAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGE-LPTSGWKCPKCS 123
C CK GD L C+ C ++H C P+ E LP W C +C+
Sbjct: 59 CDSCKEGGD-LLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCT 103
>UNIPROTKB|K7EJ43 [details] [associations]
symbol:PHF12 "PHD finger protein 12" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 EMBL:AC024267 HGNC:HGNC:20816
Ensembl:ENST00000584685 Uniprot:K7EJ43
Length = 215
Score = 146 (56.5 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 24/50 (48%), Positives = 33/50 (66%)
Query: 9 TEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDET--PEGKWSCPRC 56
T H D C+ C++GG+++ CD CP A+HL C +P L E P G+W C RC
Sbjct: 78 TNH-DSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRC 126
>TAIR|locus:2178828 [details] [associations]
symbol:AT5G58610 "AT5G58610" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP] [GO:0042991
"transcription factor import into nucleus" evidence=RCA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 INTERPRO:IPR008395 EMBL:CP002688 GO:GO:0046872
GO:GO:0008270 Gene3D:3.40.630.30 InterPro:IPR016181 SUPFAM:SSF55729
GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 Pfam:PF05641 InterPro:IPR014002
SMART:SM00743 IPI:IPI00519073 RefSeq:NP_200669.1 UniGene:At.55614
ProteinModelPortal:F4KGA3 SMR:F4KGA3 EnsemblPlants:AT5G58610.1
GeneID:835975 KEGG:ath:AT5G58610 OMA:RITQDWN Uniprot:F4KGA3
Length = 1065
Score = 159 (61.0 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 44/135 (32%), Positives = 58/135 (42%)
Query: 8 QTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASP 67
Q E+ +C VC GG++ILCD CP A+H CL L++ P+G W C C G
Sbjct: 690 QGENDVFCSVCHYGGKLILCDGCPSAFHANCLG--LEDVPDGDWFCQSCCC-GACGQFFL 746
Query: 68 PAEEVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLP-----DPIEGELPTSGWKCPK- 121
KE ++F+ C+ C YHP CL D ++ L W C K
Sbjct: 747 KTTSTNAKE----------EKFISCKQCELKYHPSCLRYDGACDSLDKILGEK-WFCSKD 795
Query: 122 CSCPPLPGKLEDMAS 136
C P D AS
Sbjct: 796 CEESLEPNMYGDDAS 810
>UNIPROTKB|F1M4B8 [details] [associations]
symbol:Phf14 "Protein Phf14" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 IPI:IPI00566375 Ensembl:ENSRNOT00000007707
RGD:1563764 ArrayExpress:F1M4B8 Uniprot:F1M4B8
Length = 924
Score = 105 (42.0 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 22/64 (34%), Positives = 30/64 (46%)
Query: 15 CEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPE----GKWSCPRCVSDGPPETASP 67
C +C++ + ++LCDTC YHL CLDP L P W C C G + +
Sbjct: 719 CGICKKNHDQHLLLLCDTCKLHYHLGCLDPPLTRMPRKTKNSYWQCSECDQAGSSDMEAE 778
Query: 68 PAEE 71
A E
Sbjct: 779 MAME 782
Score = 104 (41.7 bits), Expect = 0.00066, P = 0.00066
Identities = 23/60 (38%), Positives = 31/60 (51%)
Query: 5 QDLQTEHQDYCEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGK---WSCPRCVS 58
+DL+TE C C+ GE ++ CD C YH CLDP L ++P+ W C C S
Sbjct: 856 EDLRTE----CSTCKGTGENENLVRCDECRLCYHFGCLDPPLKKSPKQTGYGWICQECDS 911
Score = 84 (34.6 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 18/60 (30%), Positives = 30/60 (50%)
Query: 67 PPAEEVKEKEVLCAKCKSPGDQ--FLLCETCNGSYHPHCLPDPIEGELPTSG--WKCPKC 122
P AE+++ + C+ CK G+ + C+ C YH CL P++ +G W C +C
Sbjct: 853 PKAEDLRTE---CSTCKGTGENENLVRCDECRLCYHFGCLDPPLKKSPKQTGYGWICQEC 909
>POMBASE|SPAC16C9.05 [details] [associations]
symbol:cph1 "Clr6 histone deacetylase associated PHD
protein-1 Cph1" species:4896 "Schizosaccharomyces pombe"
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IPI]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016575 "histone deacetylation" evidence=ISO]
[GO:0019787 "small conjugating protein ligase activity"
evidence=ISM] [GO:0032221 "Rpd3S complex" evidence=IDA] [GO:0071276
"cellular response to cadmium ion" evidence=IMP] [GO:0071585
"detoxification of cadmium ion" evidence=IMP] InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
PomBase:SPAC16C9.05 GO:GO:0005829 EMBL:CU329670 GO:GO:0046872
GO:GO:0071276 GO:GO:0071585 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006368
InterPro:IPR019786 PROSITE:PS01359 eggNOG:NOG317492 GO:GO:0019787
GO:GO:0016575 GO:GO:0032221 PIR:T37778 RefSeq:NP_593079.1
ProteinModelPortal:Q09819 STRING:Q09819 EnsemblFungi:SPAC16C9.05.1
GeneID:2542318 KEGG:spo:SPAC16C9.05 OrthoDB:EOG4N6053
NextBio:20803379 Uniprot:Q09819
Length = 404
Score = 128 (50.1 bits), Expect = 3.2e-10, Sum P(2) = 3.2e-10
Identities = 24/55 (43%), Positives = 30/55 (54%)
Query: 13 DYCEVCQQGGEIILCDTCPRAYHLCCLDPEL--DETPEGKWSCPRCV--SDGPPE 63
DYC C G I C+ CP ++HL CL+P L + PEG W C C S PP+
Sbjct: 118 DYCSACGGRGLFICCEGCPCSFHLSCLEPPLTPENIPEGSWFCVTCSIKSHHPPK 172
Score = 45 (20.9 bits), Expect = 3.2e-10, Sum P(2) = 3.2e-10
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 79 CAKCKSP--GDQFLL-CETCNGSYHPHC 103
C C P G ++ C+ C+ YH +C
Sbjct: 241 CGYCSKPSMGACWVYGCQLCDTFYHKNC 268
>UNIPROTKB|E1B6X6 [details] [associations]
symbol:BAZ1B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071884 "vitamin D receptor activator activity"
evidence=IEA] [GO:0071778 "WINAC complex" evidence=IEA] [GO:0070577
"histone acetyl-lysine binding" evidence=IEA] [GO:0048096
"chromatin-mediated maintenance of transcription" evidence=IEA]
[GO:0043596 "nuclear replication fork" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0042809
"vitamin D receptor binding" evidence=IEA] [GO:0035173 "histone
kinase activity" evidence=IEA] [GO:0034725 "DNA
replication-dependent nucleosome disassembly" evidence=IEA]
[GO:0032947 "protein complex scaffold" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=IEA] [GO:0005721 "centromeric
heterochromatin" evidence=IEA] [GO:0004713 "protein tyrosine kinase
activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003007 "heart morphogenesis" evidence=IEA]
[GO:0000793 "condensed chromosome" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089
SMART:SM00184 SMART:SM00249 SMART:SM00297 GO:GO:0046872
GO:GO:0003007 GO:GO:0008270 GO:GO:0003682 GO:GO:0004713
GO:GO:0043596 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006302 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005721 GO:GO:0000793 GO:GO:0048096
GO:GO:0043044 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR018500 InterPro:IPR018501
InterPro:IPR013136 Pfam:PF10537 SMART:SM00571 PROSITE:PS50827
PROSITE:PS51136 GeneTree:ENSGT00660000095335 OMA:CNKAFHL
GO:GO:0071778 GO:GO:0035173 GO:GO:0071884 GO:GO:0034725
EMBL:DAAA02058197 IPI:IPI00704240 UniGene:Bt.32325
Ensembl:ENSBTAT00000006848 NextBio:20868520 Uniprot:E1B6X6
Length = 1482
Score = 147 (56.8 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 26/54 (48%), Positives = 36/54 (66%)
Query: 6 DLQTEHQDYCEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
D+ E+ C+VC++ GE +ILCD C +A+HL CL P L E P+G+W CP C
Sbjct: 1179 DMSAENAR-CKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPAC 1231
Score = 40 (19.1 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 9/35 (25%), Positives = 18/35 (51%)
Query: 66 SPPAEEVKEKEVLCAKCKSPGDQFLLCETCNGSYH 100
+PPA++++ E++ +S Q L + C H
Sbjct: 1318 APPADDMEVDELVLQTKRSSRRQSLELQKCEEILH 1352
>ZFIN|ZDB-GENE-080519-3 [details] [associations]
symbol:nsd1a "nuclear receptor binding SET domain
protein 1a" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0032259 "methylation" evidence=IEA] [GO:0008168
"methyltransferase activity" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] InterPro:IPR001841 Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215
SMART:SM00184 SMART:SM00249 SMART:SM00317 SMART:SM00570
Pfam:PF00855 ZFIN:ZDB-GENE-080519-3 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 KO:K15588
EMBL:CU633762 EMBL:CU655965 EMBL:CU659412 IPI:IPI00512787
RefSeq:XP_683890.4 UniGene:Dr.83733 Ensembl:ENSDART00000084114
GeneID:556086 KEGG:dre:556086 CTD:556086 NextBio:20881309
ArrayExpress:F1QA79 Bgee:F1QA79 Uniprot:F1QA79
Length = 2055
Score = 131 (51.2 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 40/117 (34%), Positives = 56/117 (47%)
Query: 6 DLQTEHQDYCEVCQQGGEIILCDT--CPRAYHLCCLDPELDETPEGKWSCP--RCVSDGP 61
++ E +D C C GG+I+ C CP+ YH CL+ L + P G+W CP +C G
Sbjct: 1794 EVTKEREDECFYCGDGGQIVSCKKPGCPKVYHADCLN--LSKRPAGRWECPWHQCNECGR 1851
Query: 62 PETAS-----PPAEEVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIE-GEL 112
E AS P + + +E + K G L C S H C PDP+E GE+
Sbjct: 1852 -EAASYCEMCPNSYCEQHREGMLFISKLDGK--LSC-----SEHDPCGPDPLEPGEI 1900
Score = 118 (46.6 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 14 YCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPP 62
+C VC +GG ++ C++CP A+H CL+ E+ P+G W C C + P
Sbjct: 1392 WCFVCSEGGSLLCCESCPAAFHRECLNIEM---PQGSWFCNDCRAGKKP 1437
Score = 111 (44.1 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 19/46 (41%), Positives = 32/46 (69%)
Query: 12 QDYCEVCQQGGEIILCD-TCPRAYHLCCLDPELDETPEGKWSCPRC 56
++ C+VC++ GE++LC+ C A+HL C+ L ETP+G++ C C
Sbjct: 1226 ENVCQVCEKTGELLLCEGQCCGAFHLQCIG--LTETPKGRFICQEC 1269
Score = 72 (30.4 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 19/58 (32%), Positives = 25/58 (43%)
Query: 69 AEEVKEKEVLCAKCKSPGDQFLLCET--CNGSYHPHCLPDPIEGELPTSGWKCPKCSC 124
+E KE+E C C G Q + C+ C YH CL + P W+CP C
Sbjct: 1793 SEVTKEREDECFYC-GDGGQIVSCKKPGCPKVYHADCLN---LSKRPAGRWECPWHQC 1846
>UNIPROTKB|F1RGC2 [details] [associations]
symbol:TRIM66 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0016235 "aggresome" evidence=IEA]
[GO:0010369 "chromocenter" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119
SMART:SM00249 SMART:SM00297 SMART:SM00502 GO:GO:0005634
GO:GO:0045892 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0016235 Gene3D:1.20.920.10
SUPFAM:SSF47370 GO:GO:0010369 GeneTree:ENSGT00530000062982
OMA:HMENERA EMBL:FP102759 Ensembl:ENSSSCT00000015917 Uniprot:F1RGC2
Length = 1238
Score = 152 (58.6 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 26/54 (48%), Positives = 32/54 (59%)
Query: 10 EHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPE 63
E++D+C VC GGE++ CD CP+ YHL C P L P G W C C S PE
Sbjct: 990 ENEDFCAVCLNGGELLCCDRCPKVYHLSCHLPALLSFPGGDWVCTLCRSLTQPE 1043
Score = 33 (16.7 bits), Expect = 3.4e-10, Sum P(2) = 3.4e-10
Identities = 5/21 (23%), Positives = 10/21 (47%)
Query: 105 PDPIEGELPTSGWKCPKCSCP 125
P+ + ++ W C K + P
Sbjct: 1127 PEEVVSDVRLMFWNCAKFNYP 1147
>CGD|CAL0000662 [details] [associations]
symbol:orf19.5651 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0034721 "histone H3-K4
demethylation, trimethyl-H3-K4-specific" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0034647 "histone
demethylase activity (H3-trimethyl-K4 specific)" evidence=IEA]
[GO:0034648 "histone demethylase activity (H3-dimethyl-K4
specific)" evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR019787 Pfam:PF00628 Pfam:PF02373 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 CGD:CAL0000662
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR019786 PROSITE:PS01359
EMBL:AACQ01000129 EMBL:AACQ01000128 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 eggNOG:NOG327026 RefSeq:XP_713332.1
RefSeq:XP_713379.1 ProteinModelPortal:Q59UR9 STRING:Q59UR9
GeneID:3644970 GeneID:3645037 KEGG:cal:CaO19.13096
KEGG:cal:CaO19.5651 Uniprot:Q59UR9
Length = 723
Score = 119 (46.9 bits), Expect = 3.5e-10, Sum P(3) = 3.5e-10
Identities = 22/55 (40%), Positives = 30/55 (54%)
Query: 6 DLQTEHQDYCEVCQQG---GEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCV 57
D + E+ D C VC Q E +LCD C YH+ CL+P L+ P W C +C+
Sbjct: 172 DSEDEY-DSCLVCGQHDHPSETLLCDNCDNPYHMKCLNPPLESVPATSWYCDKCL 225
Score = 106 (42.4 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 27/86 (31%), Positives = 42/86 (48%)
Query: 39 LDPELDETPE--GKWSCPRCVSDGPPETASPPAEEVKEKEVLCAKCKSPGDQFLLCETCN 96
L+ E D T + + C D P E+ S E+ + ++C + P + LLC+ C+
Sbjct: 145 LEREYDSTIKYYATYLHTNCTYDFP-ESDS---EDEYDSCLVCGQHDHPSET-LLCDNCD 199
Query: 97 GSYHPHCLPDPIEGELPTSGWKCPKC 122
YH CL P+E +P + W C KC
Sbjct: 200 NPYHMKCLNPPLES-VPATSWYCDKC 224
Score = 44 (20.5 bits), Expect = 3.5e-10, Sum P(3) = 3.5e-10
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 68 PAEEVKEKEVLCAKCKSP-GDQFLLCETCNGSY--HPHCLPDPIE 109
P+ + +++ LC CK+ G Q+ + E N P P IE
Sbjct: 552 PSVDNNDEDDLCDSCKTHIGFQYFVLEPENSKQLLTPDASPQEIE 596
Score = 35 (17.4 bits), Expect = 3.5e-10, Sum P(3) = 3.5e-10
Identities = 6/12 (50%), Positives = 8/12 (66%)
Query: 119 CPKCSCPPLPGK 130
C +C CP + GK
Sbjct: 686 CSECVCP-MKGK 696
>UNIPROTKB|F1LXK8 [details] [associations]
symbol:LOC100362634 "Protein LOC100362634" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR009071 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00249 GO:GO:0046872
GO:GO:0008284 GO:GO:0008270 GO:GO:0045944 SMART:SM00398
SUPFAM:SSF47095 GO:GO:0044212 GO:GO:0043627 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0033148
GO:GO:0035097 GeneTree:ENSGT00690000101661 IPI:IPI00560982
Ensembl:ENSRNOT00000040635 ArrayExpress:F1LXK8 Uniprot:F1LXK8
Length = 2383
Score = 144 (55.7 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 33/89 (37%), Positives = 41/89 (46%)
Query: 15 CEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASPPAE- 70
CEVC Q + ++LCD C +YH CLDP L P+G W C CVS ASP
Sbjct: 129 CEVCGQASDPSRLLLCDDCDISYHTYCLDPPLLTVPKGGWKCKWCVSCMQCGAASPGFHC 188
Query: 71 EVKEKEVLCAKCKSPGDQFLLCETCNGSY 99
E + C C S + C C+ Y
Sbjct: 189 EWQNSYTHCGPCAS----LVTCPICHAPY 213
Score = 110 (43.8 bits), Expect = 0.00011, P = 0.00011
Identities = 21/51 (41%), Positives = 29/51 (56%)
Query: 77 VLCAKCKSPGD--QFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC-SC 124
++C C D + LLC+ C+ SYH +CL P+ +P GWKC C SC
Sbjct: 127 IVCEVCGQASDPSRLLLCDDCDISYHTYCLDPPLL-TVPKGGWKCKWCVSC 176
Score = 47 (21.6 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 14/32 (43%), Positives = 16/32 (50%)
Query: 98 SYHPHCL-PDPIEGELPTSGWKCPKCSCPPLP 128
S PH L P+ + G L SG K S PP P
Sbjct: 1620 SEEPHRLAPEGLRG-LAVSGLPPQKPSAPPAP 1650
>UNIPROTKB|F1SNJ6 [details] [associations]
symbol:LOC100620590 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0004672 "protein kinase activity" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0002039 "p53
binding" evidence=IEA] [GO:0071391 "cellular response to estrogen
stimulus" evidence=IEA] [GO:0070577 "histone acetyl-lysine binding"
evidence=IEA] [GO:0070562 "regulation of vitamin D receptor
signaling pathway" evidence=IEA] [GO:0055074 "calcium ion
homeostasis" evidence=IEA] [GO:0046777 "protein
autophosphorylation" evidence=IEA] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0034056 "estrogen response element binding" evidence=IEA]
[GO:0031647 "regulation of protein stability" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0016922
"ligand-dependent nuclear receptor binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005726 "perichromatin
fibrils" evidence=IEA] [GO:0005719 "nuclear euchromatin"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00249 SMART:SM00297
GO:GO:0005737 GO:GO:0045892 GO:GO:0045893 GO:GO:0008285
GO:GO:0042981 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0046777 GO:GO:0003682 GO:GO:0004672 GO:GO:0031647
GO:GO:0030163 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005719 GO:GO:0004842 GO:GO:0055074
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0071391 GO:GO:0034056 GO:GO:0070562
GO:GO:0005726 EMBL:FP236752 Ensembl:ENSSSCT00000017986
Uniprot:F1SNJ6
Length = 301
Score = 149 (57.5 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 23/53 (43%), Positives = 32/53 (60%)
Query: 11 HQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPE 63
++D+C VCQ GGE++ C+ CP+ +HL C P L P G+W C C PE
Sbjct: 76 NEDWCAVCQNGGELLCCEKCPKVFHLSCHVPTLANFPSGEWICTFCRDLSKPE 128
>UNIPROTKB|J9P3J2 [details] [associations]
symbol:BAZ1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089 SMART:SM00184
SMART:SM00249 SMART:SM00297 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR018500 InterPro:IPR018501
InterPro:IPR013136 SMART:SM00571 PROSITE:PS50827 PROSITE:PS51136
GeneTree:ENSGT00660000095335 EMBL:AAEX03004244 EMBL:AAEX03004243
Ensembl:ENSCAFT00000046112 Uniprot:J9P3J2
Length = 1392
Score = 147 (56.8 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 26/54 (48%), Positives = 36/54 (66%)
Query: 6 DLQTEHQDYCEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
D+ E+ C+VC++ GE +ILCD C +A+HL CL P L E P+G+W CP C
Sbjct: 1088 DMSAENAR-CKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPAC 1140
Score = 39 (18.8 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 8/35 (22%), Positives = 18/35 (51%)
Query: 66 SPPAEEVKEKEVLCAKCKSPGDQFLLCETCNGSYH 100
+PP ++++ +E++ +S Q L + C H
Sbjct: 1228 APPVDDMEVEELVLQTKRSSRRQSLELQKCEDILH 1262
>UNIPROTKB|F1MD96 [details] [associations]
symbol:F1MD96 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0016235 "aggresome" evidence=IEA]
[GO:0010369 "chromocenter" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119
SMART:SM00249 SMART:SM00297 SMART:SM00336 SMART:SM00502
GO:GO:0005634 GO:GO:0045892 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0016235
Gene3D:1.20.920.10 SUPFAM:SSF47370 GO:GO:0010369
GeneTree:ENSGT00530000062982 OMA:HMENERA EMBL:DAAA02040745
EMBL:DAAA02040746 IPI:IPI01003121 Ensembl:ENSBTAT00000027831
Uniprot:F1MD96
Length = 1268
Score = 152 (58.6 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 26/54 (48%), Positives = 32/54 (59%)
Query: 10 EHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPE 63
E++D+C VC GGE++ CD CP+ YHL C P L P G W C C S PE
Sbjct: 1020 ENEDFCAVCLNGGELLCCDRCPKVYHLSCHLPALLSFPGGDWVCTLCRSLTQPE 1073
Score = 33 (16.7 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 5/21 (23%), Positives = 10/21 (47%)
Query: 105 PDPIEGELPTSGWKCPKCSCP 125
P+ + ++ W C K + P
Sbjct: 1157 PEEVVSDVRLMFWNCAKFNYP 1177
>UNIPROTKB|E2RED7 [details] [associations]
symbol:BAZ1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089 SMART:SM00184
SMART:SM00249 SMART:SM00297 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR018500 InterPro:IPR018501
InterPro:IPR013136 Pfam:PF10537 SMART:SM00571 PROSITE:PS50827
PROSITE:PS51136 GeneTree:ENSGT00660000095335 EMBL:AAEX03004244
EMBL:AAEX03004243 Ensembl:ENSCAFT00000020881 Uniprot:E2RED7
Length = 1482
Score = 147 (56.8 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 26/54 (48%), Positives = 36/54 (66%)
Query: 6 DLQTEHQDYCEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
D+ E+ C+VC++ GE +ILCD C +A+HL CL P L E P+G+W CP C
Sbjct: 1178 DMSAENAR-CKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPAC 1230
Score = 39 (18.8 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 8/35 (22%), Positives = 18/35 (51%)
Query: 66 SPPAEEVKEKEVLCAKCKSPGDQFLLCETCNGSYH 100
+PP ++++ +E++ +S Q L + C H
Sbjct: 1318 APPVDDMEVEELVLQTKRSSRRQSLELQKCEDILH 1352
>UNIPROTKB|J9PAU7 [details] [associations]
symbol:BAZ1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089 SMART:SM00184
SMART:SM00249 SMART:SM00297 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR018500 InterPro:IPR018501
InterPro:IPR013136 Pfam:PF10537 SMART:SM00571 PROSITE:PS50827
PROSITE:PS51136 GeneTree:ENSGT00660000095335 OMA:CNKAFHL
EMBL:AAEX03004244 EMBL:AAEX03004243 Ensembl:ENSCAFT00000046458
Uniprot:J9PAU7
Length = 1485
Score = 147 (56.8 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 26/54 (48%), Positives = 36/54 (66%)
Query: 6 DLQTEHQDYCEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
D+ E+ C+VC++ GE +ILCD C +A+HL CL P L E P+G+W CP C
Sbjct: 1181 DMSAENAR-CKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPAC 1233
Score = 39 (18.8 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 8/35 (22%), Positives = 18/35 (51%)
Query: 66 SPPAEEVKEKEVLCAKCKSPGDQFLLCETCNGSYH 100
+PP ++++ +E++ +S Q L + C H
Sbjct: 1321 APPVDDMEVEELVLQTKRSSRRQSLELQKCEDILH 1355
>UNIPROTKB|O15016 [details] [associations]
symbol:TRIM66 "Tripartite motif-containing protein 66"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0016235 "aggresome" evidence=IDA]
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119
SMART:SM00249 SMART:SM00297 SMART:SM00502 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0016235 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 EMBL:AJ400879 EMBL:AC091053
EMBL:AB002296 EMBL:AC104360 IPI:IPI00004420 IPI:IPI00941834
RefSeq:NP_055633.1 UniGene:Hs.130836 ProteinModelPortal:O15016
SMR:O15016 STRING:O15016 PhosphoSite:O15016 PaxDb:O15016
PRIDE:O15016 Ensembl:ENST00000299550 GeneID:9866 KEGG:hsa:9866
UCSC:uc010rbo.2 CTD:9866 GeneCards:GC11M008595 H-InvDB:HIX0201585
HGNC:HGNC:29005 HPA:HPA027420 MIM:612000 neXtProt:NX_O15016
PharmGKB:PA134954583 HOGENOM:HOG000074104 HOVERGEN:HBG057849
KO:K12032 GenomeRNAi:9866 NextBio:37189 ArrayExpress:O15016
Bgee:O15016 CleanEx:HS_TRIM66 Genevestigator:O15016
GermOnline:ENSG00000166436 Uniprot:O15016
Length = 1216
Score = 151 (58.2 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 25/54 (46%), Positives = 33/54 (61%)
Query: 10 EHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPE 63
E++D+C VC GGE++ CD CP+ +HL C P L P G+W C C S PE
Sbjct: 968 ENEDFCAVCLNGGELLCCDRCPKVFHLSCHVPALLSFPGGEWVCTLCRSLTQPE 1021
Score = 33 (16.7 bits), Expect = 4.2e-10, Sum P(2) = 4.2e-10
Identities = 5/21 (23%), Positives = 10/21 (47%)
Query: 105 PDPIEGELPTSGWKCPKCSCP 125
P+ + ++ W C K + P
Sbjct: 1105 PEEVVSDVRLMFWNCAKFNYP 1125
>UNIPROTKB|B5MCJ9 [details] [associations]
symbol:TRIM66 "Tripartite motif-containing protein 66"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0010369 "chromocenter" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0016235 "aggresome" evidence=IDA]
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119
SMART:SM00249 SMART:SM00297 SMART:SM00336 SMART:SM00502
GO:GO:0005634 GO:GO:0045892 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0016235
Gene3D:1.20.920.10 SUPFAM:SSF47370 GO:GO:0010369 EMBL:AC091053
EMBL:AC104360 IPI:IPI00941834 HGNC:HGNC:29005 HOGENOM:HOG000074104
HOVERGEN:HBG057849 ProteinModelPortal:B5MCJ9 SMR:B5MCJ9
STRING:B5MCJ9 PRIDE:B5MCJ9 Ensembl:ENST00000402157 OMA:HMENERA
OrthoDB:EOG42V8FR ArrayExpress:B5MCJ9 Bgee:B5MCJ9 Uniprot:B5MCJ9
Length = 1245
Score = 151 (58.2 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
Identities = 25/54 (46%), Positives = 33/54 (61%)
Query: 10 EHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPE 63
E++D+C VC GGE++ CD CP+ +HL C P L P G+W C C S PE
Sbjct: 997 ENEDFCAVCLNGGELLCCDRCPKVFHLSCHVPALLSFPGGEWVCTLCRSLTQPE 1050
Score = 33 (16.7 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
Identities = 5/21 (23%), Positives = 10/21 (47%)
Query: 105 PDPIEGELPTSGWKCPKCSCP 125
P+ + ++ W C K + P
Sbjct: 1134 PEEVVSDVRLMFWNCAKFNYP 1154
>UNIPROTKB|E7EN20 [details] [associations]
symbol:TRIM33 "E3 ubiquitin-protein ligase TRIM33"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00249 SMART:SM00297
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.20.920.10
SUPFAM:SSF47370 EMBL:AL390241 EMBL:AL035410 HGNC:HGNC:16290
ChiTaRS:TRIM33 IPI:IPI00748247 ProteinModelPortal:E7EN20 SMR:E7EN20
Ensembl:ENST00000450349 UCSC:uc010owr.2 ArrayExpress:E7EN20
Bgee:E7EN20 Uniprot:E7EN20
Length = 759
Score = 155 (59.6 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 35/105 (33%), Positives = 49/105 (46%)
Query: 11 HQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASPPAE 70
++D+C VCQ GG+++ C+ CP+ +HL C P L P G W C C G PE
Sbjct: 518 NEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDIGKPEVEYDCDN 577
Query: 71 EVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTS 115
K+ A+ SP DQ CE + H L + +P S
Sbjct: 578 LQHSKKGKTAQGLSPVDQ-RKCERLLLYLYCHELSIEFQEPVPAS 621
>ASPGD|ASPL0000010243 [details] [associations]
symbol:AN8211 species:162425 "Emericella nidulans"
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0031934 "mating-type
region heterochromatin" evidence=IEA] [GO:0048189 "Lid2 complex"
evidence=IEA] [GO:0031618 "nuclear centromeric heterochromatin"
evidence=IEA] [GO:0034647 "histone demethylase activity
(H3-trimethyl-K4 specific)" evidence=IEA] [GO:0000070 "mitotic
sister chromatid segregation" evidence=IEA] [GO:0030466 "chromatin
silencing at silent mating-type cassette" evidence=IEA] [GO:0034630
"RITS complex localization" evidence=IEA] [GO:0031507
"heterochromatin assembly" evidence=IEA] [GO:0051572 "negative
regulation of histone H3-K4 methylation" evidence=IEA] [GO:0051567
"histone H3-K9 methylation" evidence=IEA] [GO:0030702 "chromatin
silencing at centromere" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 EMBL:BN001302 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 OrthoDB:EOG44N21B KO:K11446
EMBL:AACD01000143 RefSeq:XP_681480.1 ProteinModelPortal:Q5AU19
EnsemblFungi:CADANIAT00004258 GeneID:2869040 KEGG:ani:AN8211.2
HOGENOM:HOG000160061 OMA:HFGATKT Uniprot:Q5AU19
Length = 1717
Score = 126 (49.4 bits), Expect = 4.7e-10, Sum P(2) = 4.7e-10
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 13 DYCEVC---QQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCV 57
D CE C + I++CD+C + +H CLDP L PE W CP+C+
Sbjct: 455 DKCETCGKSEDRSSILVCDSCDQGFHRYCLDPPLHHIPEFDWHCPKCL 502
Score = 61 (26.5 bits), Expect = 4.7e-10, Sum P(2) = 4.7e-10
Identities = 15/56 (26%), Positives = 24/56 (42%)
Query: 70 EEVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKCSCP 125
+ +++V C S + CE C YH CL G++ +C K +CP
Sbjct: 1315 QSTAKRDVFCICRHSEAGMMIECEICGEWYHGKCLKIA-RGKVK----ECDKYTCP 1365
>UNIPROTKB|H0Y612 [details] [associations]
symbol:TRIM33 "E3 ubiquitin-protein ligase TRIM33"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 EMBL:AL390241
EMBL:AL035410 HGNC:HGNC:16290 ChiTaRS:TRIM33
ProteinModelPortal:H0Y612 PRIDE:H0Y612 Ensembl:ENST00000448034
Bgee:H0Y612 Uniprot:H0Y612
Length = 888
Score = 155 (59.6 bits), Expect = 5.6e-10, P = 5.6e-10
Identities = 35/105 (33%), Positives = 49/105 (46%)
Query: 11 HQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASPPAE 70
++D+C VCQ GG+++ C+ CP+ +HL C P L P G W C C G PE
Sbjct: 647 NEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDIGKPEVEYDCDN 706
Query: 71 EVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTS 115
K+ A+ SP DQ CE + H L + +P S
Sbjct: 707 LQHSKKGKTAQGLSPVDQ-RKCERLLLYLYCHELSIEFQEPVPAS 750
>UNIPROTKB|F1NQI2 [details] [associations]
symbol:PHF14 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GeneTree:ENSGT00690000102091 OMA:SQELSME
EMBL:AC145960 EMBL:AADN02000799 IPI:IPI00571930
Ensembl:ENSGALT00000017434 ArrayExpress:F1NQI2 Uniprot:F1NQI2
Length = 923
Score = 121 (47.7 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 34/105 (32%), Positives = 47/105 (44%)
Query: 5 QDLQTEHQDYCEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGK---WSCPRCVS 58
+DL+TE C C+ G+ ++ CD C YH CLDP L ++P+ W C C S
Sbjct: 819 EDLRTE----CATCKGTGDNENLVRCDECRLCYHFGCLDPPLKKSPKQTGYGWICQECDS 874
Query: 59 DGPPETASPPAEEVKEKEV-LCAKCKSPGDQ---FLLCETCNGSY 99
E + E +E+ L K K GD F + CN Y
Sbjct: 875 TSSKEDENEAEAEHPSQELNLEQKIKKIGDCCSCFKYFQLCNSDY 919
Score = 104 (41.7 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 22/64 (34%), Positives = 30/64 (46%)
Query: 15 CEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPE----GKWSCPRCVSDGPPETASP 67
C +C++ + ++LCDTC YHL CLDP L P W C C G + +
Sbjct: 682 CGICKKNHDQHLLLLCDTCKLHYHLGCLDPPLTRMPRKTKNSYWQCSECDQAGSSDMEAD 741
Query: 68 PAEE 71
A E
Sbjct: 742 IAME 745
Score = 88 (36.0 bits), Expect = 5.6e-10, Sum P(2) = 5.6e-10
Identities = 19/60 (31%), Positives = 30/60 (50%)
Query: 67 PPAEEVKEKEVLCAKCKSPGDQ--FLLCETCNGSYHPHCLPDPIEGELPTSG--WKCPKC 122
P +E+++ + CA CK GD + C+ C YH CL P++ +G W C +C
Sbjct: 816 PKSEDLRTE---CATCKGTGDNENLVRCDECRLCYHFGCLDPPLKKSPKQTGYGWICQEC 872
>UNIPROTKB|G3MZF2 [details] [associations]
symbol:MLL2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008168 "methyltransferase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF00856 InterPro:IPR009071
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR003888
InterPro:IPR003889 InterPro:IPR019787 Pfam:PF00628 Pfam:PF05964
Pfam:PF05965 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50280
PROSITE:PS51542 PROSITE:PS51543 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00541 SMART:SM00542 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 SMART:SM00398 SUPFAM:SSF47095
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0008168 InterPro:IPR003616 SMART:SM00508
PROSITE:PS50868 GeneTree:ENSGT00690000101661 EMBL:DAAA02012952
Ensembl:ENSBTAT00000063707 Uniprot:G3MZF2
Length = 5420
Score = 144 (55.7 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 33/89 (37%), Positives = 41/89 (46%)
Query: 15 CEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASPPAE- 70
CEVC Q + ++LCD C +YH CLDP L P+G W C CVS ASP
Sbjct: 1367 CEVCGQASDPSRLLLCDDCDISYHTYCLDPPLLTVPKGGWKCKWCVSCMQCGAASPGFHC 1426
Query: 71 EVKEKEVLCAKCKSPGDQFLLCETCNGSY 99
E + C C S + C C+ Y
Sbjct: 1427 EWQNSYTHCGPCAS----LVTCPICHAPY 1451
Score = 137 (53.3 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 34/109 (31%), Positives = 52/109 (47%)
Query: 15 CEVCQQGG---EIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCV---SDGPPETASPP 68
C+ C++ G ++++C+TC + YH CL P ++E P W C C + G P
Sbjct: 276 CQACRKPGNDSKMLVCETCDKGYHTFCLKPPMEELPAHSWKCKACRVCRACGAGSAELNP 335
Query: 69 AEEVKEKEVLCAKC-KSPGDQFLLCETCNGSYHPHCLP-DPIE-GELPT 114
E E LC +C K+PG Q + + + P C P+E G PT
Sbjct: 336 NSEWFENYSLCHRCHKAPGGQPV--SSLAEQHPPVCSRFSPLEPGATPT 382
Score = 130 (50.8 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 78 LCAKCKSPGD--QFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC 122
+C C+ PG+ + L+CETC+ YH CL P+E ELP WKC C
Sbjct: 275 VCQACRKPGNDSKMLVCETCDKGYHTFCLKPPME-ELPAHSWKCKAC 320
Score = 118 (46.6 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 33/112 (29%), Positives = 47/112 (41%)
Query: 15 CEVCQQGGEIILCDT--CPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASPPAEEV 72
C C + G I C + C R YH C T G + + + PE S A +
Sbjct: 172 CSHCTRLGASIPCRSPGCSRLYHFPCA------TASGSFLSMKTLQLLCPEH-SEGATHL 224
Query: 73 KEKEVLCAKCKSPGD--QFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC 122
+E CA C+ PG+ C +C YH CL + +GW+CP+C
Sbjct: 225 EEAR--CAVCEGPGELCDLFFCTSCGHHYHGACLDTALTAR-KRAGWQCPEC 273
Score = 110 (43.8 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 21/51 (41%), Positives = 29/51 (56%)
Query: 77 VLCAKCKSPGD--QFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC-SC 124
++C C D + LLC+ C+ SYH +CL P+ +P GWKC C SC
Sbjct: 1365 IVCEVCGQASDPSRLLLCDDCDISYHTYCLDPPLL-TVPKGGWKCKWCVSC 1414
Score = 52 (23.4 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 107 PIEGELPTSGWKCPKCSCPPL---PGKLEDMASLL 138
P E +LPT+ PK PPL PG++ A+ L
Sbjct: 4214 PSEAQLPTTQPGTPKPQGPPLELPPGRVSPAAAQL 4248
Score = 41 (19.5 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 13/36 (36%), Positives = 18/36 (50%)
Query: 38 CLDPELDETPEGKWSCPRCVSDGPPETA--SPPAEE 71
CL P +E+P +S PPE + SPP E+
Sbjct: 563 CLFPPFEESPLSPPPEESPLSP-PPEASRLSPPPED 597
Score = 38 (18.4 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 10/24 (41%), Positives = 12/24 (50%)
Query: 105 PDPIEGELPTSGWKCPKCSCPPLP 128
P+ + G L SG K S PP P
Sbjct: 2859 PEGLRG-LAVSGLPPQKPSAPPAP 2881
Score = 33 (16.7 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 10/35 (28%), Positives = 14/35 (40%)
Query: 107 PIEGELPTSGWKCPKCSCPPLPGKLEDMASLLRLP 141
P+ P S + PK LP + S +LP
Sbjct: 4186 PVHPTPPPSSPQEPKRPSSQLPSPSSQLPSEAQLP 4220
>UNIPROTKB|E1B9N8 [details] [associations]
symbol:MLL2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0043627 "response
to estrogen stimulus" evidence=IEA] [GO:0035097 "histone
methyltransferase complex" evidence=IEA] [GO:0033148 "positive
regulation of intracellular estrogen receptor signaling pathway"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF00856 InterPro:IPR009071
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR003888
InterPro:IPR003889 InterPro:IPR019787 Pfam:PF00628 Pfam:PF05964
Pfam:PF05965 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50280
PROSITE:PS51542 PROSITE:PS51543 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00541 SMART:SM00542 GO:GO:0046872
GO:GO:0008284 GO:GO:0008270 GO:GO:0045944 SMART:SM00398
SUPFAM:SSF47095 GO:GO:0044212 GO:GO:0043627 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0008168
GO:GO:0033148 InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GO:GO:0035097 GeneTree:ENSGT00690000101661 OMA:PPNLGFV
EMBL:DAAA02012952 IPI:IPI00685960 Ensembl:ENSBTAT00000019193
Uniprot:E1B9N8
Length = 5448
Score = 144 (55.7 bits), Expect = 6.0e-10, Sum P(2) = 6.0e-10
Identities = 33/89 (37%), Positives = 41/89 (46%)
Query: 15 CEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASPPAE- 70
CEVC Q + ++LCD C +YH CLDP L P+G W C CVS ASP
Sbjct: 1395 CEVCGQASDPSRLLLCDDCDISYHTYCLDPPLLTVPKGGWKCKWCVSCMQCGAASPGFHC 1454
Query: 71 EVKEKEVLCAKCKSPGDQFLLCETCNGSY 99
E + C C S + C C+ Y
Sbjct: 1455 EWQNSYTHCGPCAS----LVTCPICHAPY 1479
Score = 137 (53.3 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 34/109 (31%), Positives = 52/109 (47%)
Query: 15 CEVCQQGG---EIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCV---SDGPPETASPP 68
C+ C++ G ++++C+TC + YH CL P ++E P W C C + G P
Sbjct: 276 CQACRKPGNDSKMLVCETCDKGYHTFCLKPPMEELPAHSWKCKACRVCRACGAGSAELNP 335
Query: 69 AEEVKEKEVLCAKC-KSPGDQFLLCETCNGSYHPHCLP-DPIE-GELPT 114
E E LC +C K+PG Q + + + P C P+E G PT
Sbjct: 336 NSEWFENYSLCHRCHKAPGGQPV--SSLAEQHPPVCSRFSPLEPGATPT 382
Score = 130 (50.8 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 78 LCAKCKSPGD--QFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC 122
+C C+ PG+ + L+CETC+ YH CL P+E ELP WKC C
Sbjct: 275 VCQACRKPGNDSKMLVCETCDKGYHTFCLKPPME-ELPAHSWKCKAC 320
Score = 118 (46.6 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 33/112 (29%), Positives = 47/112 (41%)
Query: 15 CEVCQQGGEIILCDT--CPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASPPAEEV 72
C C + G I C + C R YH C T G + + + PE S A +
Sbjct: 172 CSHCTRLGASIPCRSPGCSRLYHFPCA------TASGSFLSMKTLQLLCPEH-SEGATHL 224
Query: 73 KEKEVLCAKCKSPGD--QFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC 122
+E CA C+ PG+ C +C YH CL + +GW+CP+C
Sbjct: 225 EEAR--CAVCEGPGELCDLFFCTSCGHHYHGACLDTALTAR-KRAGWQCPEC 273
Score = 110 (43.8 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 21/51 (41%), Positives = 29/51 (56%)
Query: 77 VLCAKCKSPGD--QFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC-SC 124
++C C D + LLC+ C+ SYH +CL P+ +P GWKC C SC
Sbjct: 1393 IVCEVCGQASDPSRLLLCDDCDISYHTYCLDPPLL-TVPKGGWKCKWCVSC 1442
Score = 52 (23.4 bits), Expect = 6.0e-10, Sum P(2) = 6.0e-10
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 107 PIEGELPTSGWKCPKCSCPPL---PGKLEDMASLL 138
P E +LPT+ PK PPL PG++ A+ L
Sbjct: 4242 PSEAQLPTTQPGTPKPQGPPLELPPGRVSPAAAQL 4276
Score = 41 (19.5 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 13/36 (36%), Positives = 18/36 (50%)
Query: 38 CLDPELDETPEGKWSCPRCVSDGPPETA--SPPAEE 71
CL P +E+P +S PPE + SPP E+
Sbjct: 572 CLFPPFEESPLSPPPEESPLSP-PPEASRLSPPPED 606
Score = 38 (18.4 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 10/24 (41%), Positives = 12/24 (50%)
Query: 105 PDPIEGELPTSGWKCPKCSCPPLP 128
P+ + G L SG K S PP P
Sbjct: 2887 PEGLRG-LAVSGLPPQKPSAPPAP 2909
Score = 33 (16.7 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 10/35 (28%), Positives = 14/35 (40%)
Query: 107 PIEGELPTSGWKCPKCSCPPLPGKLEDMASLLRLP 141
P+ P S + PK LP + S +LP
Sbjct: 4214 PVHPTPPPSSPQEPKRPSSQLPSPSSQLPSEAQLP 4248
>MGI|MGI:2137357 [details] [associations]
symbol:Trim33 "tripartite motif-containing 33" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0017015 "regulation
of transforming growth factor beta receptor signaling pathway"
evidence=ISO] [GO:0030514 "negative regulation of BMP signaling
pathway" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0070410 "co-SMAD binding" evidence=ISO]
[GO:0070412 "R-SMAD binding" evidence=ISO] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 Pfam:PF13639 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00249 SMART:SM00297 SMART:SM00336 SMART:SM00502
UniPathway:UPA00143 MGI:MGI:2137357 Prosite:PS00518 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0016874
GO:GO:0008270 GO:GO:0006351 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0070412 InterPro:IPR017907
Gene3D:1.20.920.10 SUPFAM:SSF47370 eggNOG:COG5076 GO:GO:0030514
GO:GO:0017015 GO:GO:0070410 HOGENOM:HOG000252971 HOVERGEN:HBG054599
CTD:51592 KO:K08883 OrthoDB:EOG4SN1N0 EMBL:AY458590 EMBL:AK129293
EMBL:AF220138 IPI:IPI00409904 IPI:IPI00480381 RefSeq:NP_001073299.1
RefSeq:NP_444400.2 UniGene:Mm.195036 ProteinModelPortal:Q99PP7
SMR:Q99PP7 DIP:DIP-59674N IntAct:Q99PP7 STRING:Q99PP7
PhosphoSite:Q99PP7 PaxDb:Q99PP7 PRIDE:Q99PP7 GeneID:94093
KEGG:mmu:94093 UCSC:uc008qsv.1 UCSC:uc008qsw.1 InParanoid:Q99PP7
NextBio:352085 Bgee:Q99PP7 CleanEx:MM_TRIM33 Genevestigator:Q99PP7
GermOnline:ENSMUSG00000033014 Uniprot:Q99PP7
Length = 1142
Score = 156 (60.0 bits), Expect = 6.1e-10, P = 6.1e-10
Identities = 35/105 (33%), Positives = 49/105 (46%)
Query: 11 HQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASPPAE 70
++D+C VCQ GG+++ C+ CP+ +HL C P L P G W C C G PE
Sbjct: 901 NEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDIGKPEVEYDCDN 960
Query: 71 EVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTS 115
K+ A+ SP DQ CE + H L + +P S
Sbjct: 961 MQHSKKGKTAQGLSPVDQ-RKCERLLLYLYCHELSIEFQEPVPVS 1004
>UNIPROTKB|F1PLN6 [details] [associations]
symbol:TRIM33 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070412 "R-SMAD binding" evidence=IEA]
[GO:0070410 "co-SMAD binding" evidence=IEA] [GO:0030514 "negative
regulation of BMP signaling pathway" evidence=IEA] [GO:0017015
"regulation of transforming growth factor beta receptor signaling
pathway" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119 SMART:SM00184
SMART:SM00249 SMART:SM00297 SMART:SM00336 SMART:SM00502
Prosite:PS00518 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR017907 Gene3D:1.20.920.10 SUPFAM:SSF47370 GO:GO:0030514
GO:GO:0017015 GeneTree:ENSGT00530000062982 OMA:PIRSLMH
EMBL:AAEX03010993 Ensembl:ENSCAFT00000015037 Uniprot:F1PLN6
Length = 995
Score = 155 (59.6 bits), Expect = 6.5e-10, P = 6.5e-10
Identities = 35/105 (33%), Positives = 49/105 (46%)
Query: 11 HQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASPPAE 70
++D+C VCQ GG+++ C+ CP+ +HL C P L P G W C C G PE
Sbjct: 754 NEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDIGKPEVEYDCDN 813
Query: 71 EVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTS 115
K+ A+ SP DQ CE + H L + +P S
Sbjct: 814 LQHSKKGKTAQGLSPVDQ-RKCERLLLYLYCHELSIEFQEPVPAS 857
>UNIPROTKB|F1MNE1 [details] [associations]
symbol:TRIM33 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070412 "R-SMAD binding" evidence=IEA] [GO:0070410
"co-SMAD binding" evidence=IEA] [GO:0030514 "negative regulation of
BMP signaling pathway" evidence=IEA] [GO:0017015 "regulation of
transforming growth factor beta receptor signaling pathway"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
Pfam:PF13639 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 Prosite:PS00518
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR017907
Gene3D:1.20.920.10 SUPFAM:SSF47370 GO:GO:0030514 GO:GO:0017015
GeneTree:ENSGT00530000062982 CTD:51592 KO:K08883 OMA:PIRSLMH
EMBL:DAAA02007465 EMBL:DAAA02007466 EMBL:DAAA02007467
IPI:IPI00717094 RefSeq:NP_001192947.1 UniGene:Bt.91873
ProteinModelPortal:F1MNE1 PRIDE:F1MNE1 Ensembl:ENSBTAT00000001967
GeneID:533296 KEGG:bta:533296 NextBio:20875989 Uniprot:F1MNE1
Length = 1126
Score = 155 (59.6 bits), Expect = 7.6e-10, P = 7.6e-10
Identities = 35/105 (33%), Positives = 49/105 (46%)
Query: 11 HQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASPPAE 70
++D+C VCQ GG+++ C+ CP+ +HL C P L P G W C C G PE
Sbjct: 885 NEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDIGKPEVEYDCDN 944
Query: 71 EVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTS 115
K+ A+ SP DQ CE + H L + +P S
Sbjct: 945 LQHSKKGKTAQGLSPVDQ-RKCERLLLYLYCHELSIEFQEPVPAS 988
>UNIPROTKB|Q9UPN9 [details] [associations]
symbol:TRIM33 "E3 ubiquitin-protein ligase TRIM33"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0008270 "zinc ion binding" evidence=NAS]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0017015
"regulation of transforming growth factor beta receptor signaling
pathway" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030514 "negative regulation of BMP signaling pathway"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006351 "transcription,
DNA-dependent" evidence=TAS] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=TAS] [GO:0007179
"transforming growth factor beta receptor signaling pathway"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070410 "co-SMAD
binding" evidence=IPI] [GO:0070412 "R-SMAD binding" evidence=IPI]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] Reactome:REACT_71
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR003649 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF00643 Pfam:PF13639 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00249 SMART:SM00297 SMART:SM00336
SMART:SM00502 UniPathway:UPA00143 EMBL:AF119043 Prosite:PS00518
Reactome:REACT_111102 GO:GO:0005654 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0000122 GO:GO:0007179 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0004842 GO:GO:0006367
InterPro:IPR017907 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 GO:GO:0030514 GO:GO:0017015
MIM:188550 Orphanet:146 PDB:3U5N PDB:3U5O PDB:3U5P PDBsum:3U5N
PDBsum:3U5O PDBsum:3U5P EMBL:AL390241 HOVERGEN:HBG054599
EMBL:AF220136 EMBL:AF220137 EMBL:AB029036 EMBL:AL035410
EMBL:AJ132948 IPI:IPI00010252 IPI:IPI00221114 RefSeq:NP_056990.3
RefSeq:NP_148980.2 UniGene:Hs.26837 PDB:3U5M PDBsum:3U5M
ProteinModelPortal:Q9UPN9 SMR:Q9UPN9 DIP:DIP-54262N IntAct:Q9UPN9
STRING:Q9UPN9 PhosphoSite:Q9UPN9 DMDM:12643365 PaxDb:Q9UPN9
PRIDE:Q9UPN9 Ensembl:ENST00000358465 Ensembl:ENST00000369543
GeneID:51592 KEGG:hsa:51592 UCSC:uc001eew.3 UCSC:uc001eex.3
CTD:51592 GeneCards:GC01M114935 H-InvDB:HIX0000910 HGNC:HGNC:16290
HPA:HPA004345 MIM:605769 neXtProt:NX_Q9UPN9 PharmGKB:PA38118
InParanoid:Q9UPN9 KO:K08883 OMA:PIRSLMH OrthoDB:EOG4SN1N0
PhylomeDB:Q9UPN9 ChiTaRS:TRIM33 GenomeRNAi:51592 NextBio:55433
PMAP-CutDB:Q9UPN9 ArrayExpress:Q9UPN9 Bgee:Q9UPN9 CleanEx:HS_TRIM33
Genevestigator:Q9UPN9 GermOnline:ENSG00000197323 Uniprot:Q9UPN9
Length = 1127
Score = 155 (59.6 bits), Expect = 7.6e-10, P = 7.6e-10
Identities = 35/105 (33%), Positives = 49/105 (46%)
Query: 11 HQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASPPAE 70
++D+C VCQ GG+++ C+ CP+ +HL C P L P G W C C G PE
Sbjct: 886 NEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDIGKPEVEYDCDN 945
Query: 71 EVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTS 115
K+ A+ SP DQ CE + H L + +P S
Sbjct: 946 LQHSKKGKTAQGLSPVDQ-RKCERLLLYLYCHELSIEFQEPVPAS 989
>RGD|1307339 [details] [associations]
symbol:Trim33 "tripartite motif-containing 33" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0008150 "biological_process" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0017015 "regulation of transforming growth factor
beta receptor signaling pathway" evidence=ISO] [GO:0030514
"negative regulation of BMP signaling pathway" evidence=ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0070410 "co-SMAD binding" evidence=ISO]
[GO:0070412 "R-SMAD binding" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
Pfam:PF13639 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 RGD:1307339
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR017907 Gene3D:1.20.920.10 SUPFAM:SSF47370
GeneTree:ENSGT00530000062982 IPI:IPI00957392
Ensembl:ENSRNOT00000025600 UCSC:RGD:1307339 NextBio:688291
ArrayExpress:D3ZUM5 Uniprot:D3ZUM5
Length = 1127
Score = 155 (59.6 bits), Expect = 7.6e-10, P = 7.6e-10
Identities = 31/83 (37%), Positives = 42/83 (50%)
Query: 11 HQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASPPAE 70
++D+C VCQ GG+++ C+ CP+ +HL C P L P G W C C G PE
Sbjct: 903 NEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDIGKPEVEYDCDN 962
Query: 71 EVKEKEVLCAKCKSPGDQFLLCE 93
K+ A+ SP DQ CE
Sbjct: 963 MQHSKKGKTAQGLSPVDQ-RKCE 984
>MGI|MGI:2142581 [details] [associations]
symbol:Whsc1l1 "Wolf-Hirschhorn syndrome candidate 1-like 1
(human)" species:10090 "Mus musculus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008168 "methyltransferase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016571 "histone methylation"
evidence=ISO] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0018024 "histone-lysine N-methyltransferase activity"
evidence=ISO] [GO:0032259 "methylation" evidence=IEA] [GO:0034968
"histone lysine methylation" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215 SMART:SM00249
SMART:SM00317 SMART:SM00570 MGI:MGI:2142581 Pfam:PF00855
GO:GO:0005634 GO:GO:0005694 GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 eggNOG:COG2940 GO:GO:0018024 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 EMBL:AC156990
HOGENOM:HOG000230893 HOVERGEN:HBG079979 CTD:54904 KO:K11425
ChiTaRS:WHSC1L1 EMBL:AK079952 EMBL:AK132725 EMBL:AK156746
EMBL:AK170040 EMBL:AC162367 EMBL:BC064447 IPI:IPI00353681
IPI:IPI00625887 IPI:IPI00974621 IPI:IPI00987793
RefSeq:NP_001001735.1 UniGene:Mm.217337 ProteinModelPortal:Q6P2L6
SMR:Q6P2L6 STRING:Q6P2L6 PhosphoSite:Q6P2L6 PaxDb:Q6P2L6
PRIDE:Q6P2L6 DNASU:234135 Ensembl:ENSMUST00000146919
Ensembl:ENSMUST00000155861 GeneID:234135 KEGG:mmu:234135
UCSC:uc009lgk.1 UCSC:uc009lgm.1 UCSC:uc009lgp.1 InParanoid:Q6P2L6
NextBio:382034 Bgee:Q6P2L6 Genevestigator:Q6P2L6
GermOnline:ENSMUSG00000054823 Uniprot:Q6P2L6
Length = 1439
Score = 156 (60.0 bits), Expect = 8.0e-10, P = 8.0e-10
Identities = 27/50 (54%), Positives = 34/50 (68%)
Query: 11 HQDYCEVCQQGGEIILCDT--CPRAYHLCCLDPELDETPEGKWSCP--RC 56
H+DYC C GGE+++CD CP+AYHL CL+ L + P GKW CP RC
Sbjct: 1322 HEDYCFQCGDGGELVMCDKKDCPKAYHLLCLN--LTQPPHGKWECPWHRC 1369
Score = 117 (46.2 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 34/121 (28%), Positives = 51/121 (42%)
Query: 9 TEHQD-YCEVCQQGGE-IILCD-TCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETA 65
T +D C+VC++ G+ ++ C+ C R +H+ CL L PEG ++C C ET
Sbjct: 697 TSKKDTVCQVCEKAGDCLVACEGECCRHFHVECLG--LTAVPEGHFTCEEC------ETG 748
Query: 66 SPPAEEVKEKEVLCAKCKSPGDQFLLCET--CNGSYHPHCLPDPIEGELPTSGWKCPKCS 123
P C CK G C C YH C+ + G++CP+
Sbjct: 749 QHP----------CFSCKVSGKDVKRCSVSVCGKFYHEACVRKFPTAIFESKGFRCPQHC 798
Query: 124 C 124
C
Sbjct: 799 C 799
Score = 101 (40.6 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 15/39 (38%), Positives = 26/39 (66%)
Query: 18 CQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
C++GG ++ C++CP ++H CL ++ PEG W+C C
Sbjct: 917 CEKGGRLLCCESCPASFHPECLSIDM---PEGCWNCNDC 952
Score = 58 (25.5 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 17/58 (29%), Positives = 25/58 (43%)
Query: 69 AEEVKEKEVLCAKCKSPGDQFLLCET--CNGSYHPHCLPDPIEGELPTSGWKCPKCSC 124
AE E C +C G + ++C+ C +YH CL + P W+CP C
Sbjct: 1316 AEAKPIHEDYCFQC-GDGGELVMCDKKDCPKAYHLLCLNLT---QPPHGKWECPWHRC 1369
Score = 34 (17.0 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 4/7 (57%), Positives = 6/7 (85%)
Query: 120 PKCSCPP 126
P+C+C P
Sbjct: 1099 PRCNCKP 1105
>UNIPROTKB|D4A9U0 [details] [associations]
symbol:Phf21b "PHD finger protein 21B (Predicted)"
species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628
PROSITE:PS50016 SMART:SM00249 RGD:1308739 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 EMBL:CH473950 CTD:112885
OrthoDB:EOG4P2Q2F GeneTree:ENSGT00530000063984 IPI:IPI00361455
RefSeq:NP_001124152.1 UniGene:Rn.198794 Ensembl:ENSRNOT00000017906
GeneID:300117 KEGG:rno:300117 NextBio:646365 Uniprot:D4A9U0
Length = 494
Score = 150 (57.9 bits), Expect = 8.2e-10, P = 8.2e-10
Identities = 22/46 (47%), Positives = 29/46 (63%)
Query: 11 HQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
H ++C C++G + C TC AYHL CLDP L P+G W CP+C
Sbjct: 306 HDEFCAACKRGASLQPCGTCSGAYHLSCLDPPLKTAPKGVWVCPKC 351
Score = 109 (43.4 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 22/52 (42%), Positives = 27/52 (51%)
Query: 71 EVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC 122
E+ E CA CK G C TC+G+YH CL P++ P W CPKC
Sbjct: 303 EITHDE-FCAACKR-GASLQPCGTCSGAYHLSCLDPPLK-TAPKGVWVCPKC 351
>FB|FBgn0263667 [details] [associations]
symbol:Lpt "Lost PHDs of trr" species:7227 "Drosophila
melanogaster" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0035556 "intracellular signal transduction" evidence=IEA]
[GO:0006911 "phagocytosis, engulfment" evidence=IMP] [GO:0051568
"histone H3-K4 methylation" evidence=IDA] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0044666 "MLL3/4 complex"
evidence=IDA] [GO:0035076 "ecdysone receptor-mediated signaling
pathway" evidence=IGI] [GO:0071390 "cellular response to ecdysone"
evidence=IMP] [GO:1900114 "positive regulation of histone H3-K9
trimethylation" evidence=IMP] [GO:0042393 "histone binding"
evidence=IDA] [GO:0030374 "ligand-dependent nuclear receptor
transcription coactivator activity" evidence=IDA] [GO:0008230
"ecdysone receptor holocomplex" evidence=IPI] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0007474 "imaginal
disc-derived wing vein specification" evidence=IMP] [GO:0018990
"ecdysis, chitin-based cuticle" evidence=IMP] InterPro:IPR001841
InterPro:IPR009071 InterPro:IPR001965 InterPro:IPR002219
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00109
SMART:SM00184 SMART:SM00249 EMBL:AE013599 GO:GO:0006911
GO:GO:0035556 GO:GO:0046872 GO:GO:0007474 GO:GO:0008270
GO:GO:0003682 SMART:SM00398 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0042393 GO:GO:0005700
GO:GO:0035076 GO:GO:0051568 GO:GO:0030374 GO:GO:0018990
GO:GO:0044666 HSSP:Q14839 GeneTree:ENSGT00690000101661
GO:GO:1900114 GO:GO:0008230 FlyBase:FBgn0263667 EMBL:BT024446
RefSeq:NP_611847.2 UniGene:Dm.4536 SMR:Q9W1H0 MINT:MINT-284602
EnsemblMetazoa:FBtr0072134 GeneID:37795 KEGG:dme:Dmel_CG5591
UCSC:CG5591-RA InParanoid:Q9W1H0 OMA:LYANTEH GenomeRNAi:37795
NextBio:805447 Uniprot:Q9W1H0
Length = 1482
Score = 144 (55.7 bits), Expect = 8.5e-10, Sum P(2) = 8.5e-10
Identities = 38/131 (29%), Positives = 56/131 (42%)
Query: 15 CEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGKWSCPRCV-----SDGPPETAS 66
CE C + + ++LCD C +YH+ C++P L+ P G W C C P E +
Sbjct: 581 CEGCGKKNDEARLLLCDECDISYHIYCVNPPLETVPTGNWKCSFCTLCQKCGRNPTEKSE 640
Query: 67 PPAEEVKE-----KEVLCAKCK---SPGDQFLLCETCNGSYHPHCLPDPIEGELP----- 113
+ E + C CK S G+ + CE C H HC D + +L
Sbjct: 641 FGDSNMLECPSCTSQSSCPVCKVSYSNGEMIIQCEHCELWAHFHC--DSVNAQLTIDHYD 698
Query: 114 TSGWKCPKCSC 124
+ +KC KC C
Sbjct: 699 NNVYKCFKCRC 709
Score = 106 (42.4 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 22/92 (23%), Positives = 37/92 (40%)
Query: 15 CEVCQQGG----EIILCDTCPRAYHLCCLDPELDETPEGKWSCPRC--VSD-GPPETASP 67
C++C+Q + + C+ C + YH CL P + P+ W C RC +D G
Sbjct: 253 CQICRQQDSNDTKYVKCEQCQKTYHASCLRPVISAIPKYGWKCNRCRVCTDCGSRTPGGG 312
Query: 68 PAEEVKEKEVLCAKCKSPGDQFLLCETCNGSY 99
+ +C C ++ C C +Y
Sbjct: 313 SSSRWHSHYTICDSCYQQRNKGFSCPICQKAY 344
Score = 98 (39.6 bits), Expect = 7.8e-08, Sum P(3) = 7.8e-08
Identities = 16/45 (35%), Positives = 25/45 (55%)
Query: 78 LCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC 122
+C + S +++ CE C +YH CL P+ +P GWKC +C
Sbjct: 255 ICRQQDSNDTKYVKCEQCQKTYHASCLR-PVISAIPKYGWKCNRC 298
Score = 92 (37.4 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 24/66 (36%), Positives = 30/66 (45%)
Query: 78 LCAKCKSPG---DQFLL-CETCNGSYHPHCLP-DPIEGELPTSGWKCPKCSCPPLPGKLE 132
+C C S G D ++ C C YHP+C P G L GW+C C+ GK
Sbjct: 530 ICVMCGSLGIESDSVMITCAQCGQCYHPYCAGVKPSRGILQ-KGWRCLDCTVCEGCGKKN 588
Query: 133 DMASLL 138
D A LL
Sbjct: 589 DEARLL 594
Score = 79 (32.9 bits), Expect = 7.8e-08, Sum P(3) = 7.8e-08
Identities = 17/60 (28%), Positives = 30/60 (50%)
Query: 1 MSHIQDLQTEHQDYCEVCQQGGEI---ILCDTCPRAYHLCCLD-PELDETPEGKWSCPRC 56
+S + + +++ C C G++ I+C TC +H C+ L +T G W+C RC
Sbjct: 192 LSQVPVICSDNNVECLSCSSLGDLSKLIMCSTCGDHFHSTCIGLANLPDTRSG-WNCARC 250
Score = 39 (18.8 bits), Expect = 8.5e-10, Sum P(2) = 8.5e-10
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 121 KCSCPPLPGKLEDMASLLRLP 141
K PP P K E+M + + P
Sbjct: 1231 KIPMPPKPQKQEEMGRVWKQP 1251
>UNIPROTKB|I3LF49 [details] [associations]
symbol:I3LF49 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
GeneTree:ENSGT00530000062982 Ensembl:ENSSSCT00000030965
Uniprot:I3LF49
Length = 591
Score = 151 (58.2 bits), Expect = 8.5e-10, P = 8.5e-10
Identities = 34/105 (32%), Positives = 48/105 (45%)
Query: 11 HQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASPPAE 70
++D+C VCQ GG+++ C+ CP+ +HL C P L P G W C C G PE
Sbjct: 367 NEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDIGKPEVEYDCDN 426
Query: 71 EVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTS 115
K+ + SP DQ CE + H L + +P S
Sbjct: 427 LQHSKKGKTVQGLSPVDQ-RKCERLLLYLYCHELSIEFQEPVPAS 470
>WB|WBGene00004319 [details] [associations]
symbol:rbr-2 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0008340
"determination of adult lifespan" evidence=IMP] [GO:0034648
"histone demethylase activity (H3-dimethyl-K4 specific)"
evidence=IDA] [GO:0034647 "histone demethylase activity
(H3-trimethyl-K4 specific)" evidence=IDA] [GO:0034720 "histone
H3-K4 demethylation" evidence=IMP;IDA] [GO:0040028 "regulation of
vulval development" evidence=IMP] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0008340 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351
GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0034648 GO:GO:0040028 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 EMBL:Z69385 eggNOG:NOG327026
GeneTree:ENSGT00530000063118 GO:GO:0034647 KO:K11446 HSSP:Q14839
PIR:T27924 RefSeq:NP_502032.2 ProteinModelPortal:Q23541 SMR:Q23541
STRING:Q23541 PaxDb:Q23541 EnsemblMetazoa:ZK593.4 GeneID:177985
KEGG:cel:CELE_ZK593.4 UCSC:ZK593.4 CTD:177985 WormBase:ZK593.4
HOGENOM:HOG000113216 InParanoid:Q23541 OMA:KANQLLF NextBio:899238
Uniprot:Q23541
Length = 1477
Score = 130 (50.8 bits), Expect = 8.6e-10, Sum P(2) = 8.6e-10
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 12 QDYCEVCQQGGE---IILCDT--CPRAYHLCCLDPELDETPEGKWSCPRCV 57
Q +C C +G + ++LCD C H C DP LDE PEG+W CP+C+
Sbjct: 319 QVFCVACNEGKDEDLLLLCDIDGCNNGRHTYCCDPVLDEVPEGEWRCPKCI 369
Score = 109 (43.4 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 20/51 (39%), Positives = 27/51 (52%)
Query: 76 EVLCAKCKSPGDQ--FLLCET--CNGSYHPHCLPDPIEGELPTSGWKCPKC 122
+V C C D+ LLC+ CN H +C DP+ E+P W+CPKC
Sbjct: 319 QVFCVACNEGKDEDLLLLCDIDGCNNGRHTYCC-DPVLDEVPEGEWRCPKC 368
Score = 53 (23.7 bits), Expect = 8.6e-10, Sum P(2) = 8.6e-10
Identities = 13/50 (26%), Positives = 22/50 (44%)
Query: 90 LLCETCNGSYHPHCLP-DPIEGELPTSGWKCPKCSCPPLPGKLEDMASLL 138
L C C+ +H C P +LP + C +C P ++D+ + L
Sbjct: 1221 LTCIMCDSEFHVRCCEWSPFLEKLPEGCFLCVRCLRGQRP-VIDDVTTAL 1269
>UNIPROTKB|Q23541 [details] [associations]
symbol:rbr-2 "Lysine-specific demethylase rbr-2"
species:6239 "Caenorhabditis elegans" [GO:0034721 "histone H3-K4
demethylation, trimethyl-H3-K4-specific" evidence=IDA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005634 GO:GO:0008340
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016706 GO:GO:0016702 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0034648 GO:GO:0040028
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 EMBL:Z69385
eggNOG:NOG327026 GeneTree:ENSGT00530000063118 GO:GO:0034647
KO:K11446 HSSP:Q14839 PIR:T27924 RefSeq:NP_502032.2
ProteinModelPortal:Q23541 SMR:Q23541 STRING:Q23541 PaxDb:Q23541
EnsemblMetazoa:ZK593.4 GeneID:177985 KEGG:cel:CELE_ZK593.4
UCSC:ZK593.4 CTD:177985 WormBase:ZK593.4 HOGENOM:HOG000113216
InParanoid:Q23541 OMA:KANQLLF NextBio:899238 Uniprot:Q23541
Length = 1477
Score = 130 (50.8 bits), Expect = 8.6e-10, Sum P(2) = 8.6e-10
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 12 QDYCEVCQQGGE---IILCDT--CPRAYHLCCLDPELDETPEGKWSCPRCV 57
Q +C C +G + ++LCD C H C DP LDE PEG+W CP+C+
Sbjct: 319 QVFCVACNEGKDEDLLLLCDIDGCNNGRHTYCCDPVLDEVPEGEWRCPKCI 369
Score = 109 (43.4 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 20/51 (39%), Positives = 27/51 (52%)
Query: 76 EVLCAKCKSPGDQ--FLLCET--CNGSYHPHCLPDPIEGELPTSGWKCPKC 122
+V C C D+ LLC+ CN H +C DP+ E+P W+CPKC
Sbjct: 319 QVFCVACNEGKDEDLLLLCDIDGCNNGRHTYCC-DPVLDEVPEGEWRCPKC 368
Score = 53 (23.7 bits), Expect = 8.6e-10, Sum P(2) = 8.6e-10
Identities = 13/50 (26%), Positives = 22/50 (44%)
Query: 90 LLCETCNGSYHPHCLP-DPIEGELPTSGWKCPKCSCPPLPGKLEDMASLL 138
L C C+ +H C P +LP + C +C P ++D+ + L
Sbjct: 1221 LTCIMCDSEFHVRCCEWSPFLEKLPEGCFLCVRCLRGQRP-VIDDVTTAL 1269
>RGD|1308739 [details] [associations]
symbol:Phf21b "PHD finger protein 21B" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 RGD:1308739 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 OMA:SDKQALG IPI:IPI00566233
Ensembl:ENSRNOT00000046327 Uniprot:F1LTZ7
Length = 512
Score = 150 (57.9 bits), Expect = 8.7e-10, P = 8.7e-10
Identities = 22/46 (47%), Positives = 29/46 (63%)
Query: 11 HQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
H ++C C++G + C TC AYHL CLDP L P+G W CP+C
Sbjct: 324 HDEFCAACKRGASLQPCGTCSGAYHLSCLDPPLKTAPKGVWVCPKC 369
Score = 109 (43.4 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 22/52 (42%), Positives = 27/52 (51%)
Query: 71 EVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC 122
E+ E CA CK G C TC+G+YH CL P++ P W CPKC
Sbjct: 321 EITHDE-FCAACKR-GASLQPCGTCSGAYHLSCLDPPLK-TAPKGVWVCPKC 369
>ZFIN|ZDB-GENE-030131-1796 [details] [associations]
symbol:phf14 "PHD finger protein 14" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00184 SMART:SM00249 ZFIN:ZDB-GENE-030131-1796 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GeneTree:ENSGT00690000102091 CTD:9678
HOGENOM:HOG000015231 HOVERGEN:HBG053584 OrthoDB:EOG437RD8
EMBL:BX276085 EMBL:BX530058 EMBL:BX957232 IPI:IPI00508539
RefSeq:NP_001038252.1 UniGene:Dr.77386 Ensembl:ENSDART00000087662
GeneID:555505 KEGG:dre:555505 InParanoid:Q1LWT3 NextBio:20881014
Uniprot:Q1LWT3
Length = 900
Score = 104 (41.7 bits), Expect = 0.00064, P = 0.00064
Identities = 26/78 (33%), Positives = 38/78 (48%)
Query: 6 DLQTEHQDYCEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGK---WSCPRCVSD 59
D +TE C C+ G+ ++ CD C YH CLDP L ++P+ W C C +
Sbjct: 819 DTRTE----CTTCKGPGDNENLVRCDECRLCYHFGCLDPPLKKSPKQTGYGWICQECDTS 874
Query: 60 GPPETASPPAEEVKEKEV 77
E A+EV+E+ V
Sbjct: 875 SSKEEE---AQEVEEESV 889
Score = 102 (41.0 bits), Expect = 9.3e-10, Sum P(2) = 9.3e-10
Identities = 19/49 (38%), Positives = 26/49 (53%)
Query: 15 CEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPE----GKWSCPRC 56
C +C++ + ++LCDTC YHL CLDP L P+ W C C
Sbjct: 681 CGICKKNQDQHLLLLCDTCKLHYHLGCLDPPLTRMPKKTKNSYWQCSEC 729
Score = 91 (37.1 bits), Expect = 9.3e-10, Sum P(2) = 9.3e-10
Identities = 19/60 (31%), Positives = 29/60 (48%)
Query: 67 PPAEEVKEKEVLCAKCKSPGDQ--FLLCETCNGSYHPHCLPDPIEGELPTSG--WKCPKC 122
P A++ + + C CK PGD + C+ C YH CL P++ +G W C +C
Sbjct: 815 PKADDTRTE---CTTCKGPGDNENLVRCDECRLCYHFGCLDPPLKKSPKQTGYGWICQEC 871
Score = 89 (36.4 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 20/50 (40%), Positives = 25/50 (50%)
Query: 79 CAKCKSPGDQ--FLLCETCNGSYHPHCLPDPIEGELP----TSGWKCPKC 122
C CK DQ LLC+TC YH CL P+ +P S W+C +C
Sbjct: 681 CGICKKNQDQHLLLLCDTCKLHYHLGCLDPPLT-RMPKKTKNSYWQCSEC 729
Score = 61 (26.5 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 24/81 (29%), Positives = 30/81 (37%)
Query: 10 EHQDYCEVC-----QQGGEIILCDTCPRAYHLCC--LDPELD-------ETPEGKWSCPR 55
EH C VC + EII CD C H C +D E D E W C
Sbjct: 283 EHILICCVCLGDNSEDADEIIQCDNCGVTVHEGCYGVDGESDSIMSSASENSTEPWFCDA 342
Query: 56 CVSDGPPETASPPAEEVKEKE 76
C + P P+++ KE
Sbjct: 343 CKNGVSPSCELCPSQDGIFKE 363
>MGI|MGI:2443812 [details] [associations]
symbol:Phf21b "PHD finger protein 21B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
MGI:MGI:2443812 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS01359 HOVERGEN:HBG080293 CTD:112885 eggNOG:NOG291382
OMA:SDKQALG EMBL:AK042863 IPI:IPI00227362 RefSeq:NP_001074635.2
UniGene:Mm.101022 ProteinModelPortal:Q8C966 SMR:Q8C966
STRING:Q8C966 PhosphoSite:Q8C966 PRIDE:Q8C966
Ensembl:ENSMUST00000159939 GeneID:271305 KEGG:mmu:271305
UCSC:uc007xco.2 GeneTree:ENSGT00530000063984 NextBio:393443
Bgee:Q8C966 CleanEx:MM_PHF21B Genevestigator:Q8C966
GermOnline:ENSMUSG00000016624 Uniprot:Q8C966
Length = 487
Score = 149 (57.5 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 22/46 (47%), Positives = 29/46 (63%)
Query: 11 HQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
H ++C C++G + C TC AYHL CLDP L P+G W CP+C
Sbjct: 306 HDEFCAACKRGASLQPCGTCSGAYHLSCLDPPLKTPPKGLWVCPKC 351
Score = 108 (43.1 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 23/53 (43%), Positives = 28/53 (52%)
Query: 71 EVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSG-WKCPKC 122
E+ E CA CK G C TC+G+YH CL P++ P G W CPKC
Sbjct: 303 EITHDE-FCAACKR-GASLQPCGTCSGAYHLSCLDPPLK--TPPKGLWVCPKC 351
>UNIPROTKB|Q9UIG0 [details] [associations]
symbol:BAZ1B "Tyrosine-protein kinase BAZ1B" species:9606
"Homo sapiens" [GO:0004715 "non-membrane spanning protein tyrosine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000793 "condensed chromosome" evidence=IEA]
[GO:0005721 "centromeric heterochromatin" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=NAS] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0070577 "histone acetyl-lysine binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0035173 "histone kinase activity" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IDA] [GO:0016572
"histone phosphorylation" evidence=IDA] [GO:0004713 "protein
tyrosine kinase activity" evidence=IDA] [GO:0032947 "protein
complex scaffold" evidence=IDA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IDA] [GO:0071778 "WINAC complex"
evidence=IDA] [GO:0042809 "vitamin D receptor binding"
evidence=IPI] [GO:0006337 "nucleosome disassembly" evidence=IDA]
[GO:0034725 "DNA replication-dependent nucleosome disassembly"
evidence=IMP] [GO:0071884 "vitamin D receptor activator activity"
evidence=IMP] [GO:0006351 "transcription, DNA-dependent"
evidence=NAS] [GO:0043596 "nuclear replication fork" evidence=IDA]
[GO:0003007 "heart morphogenesis" evidence=ISS] [GO:0006302
"double-strand break repair" evidence=ISS] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=ISS] [GO:0048096
"chromatin-mediated maintenance of transcription" evidence=ISS]
InterPro:IPR001841 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
SMART:SM00297 GO:GO:0005524 GO:GO:0046872 GO:GO:0003007
GO:GO:0008270 GO:GO:0006351 GO:GO:0003682 GO:GO:0004715
GO:GO:0004713 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006302 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005721 GO:GO:0032947 GO:GO:0000793
GO:GO:0048096 GO:GO:0043044 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 GO:GO:0070577 InterPro:IPR018359
InterPro:IPR018500 InterPro:IPR018501 InterPro:IPR013136
Pfam:PF10537 SMART:SM00571 PROSITE:PS50827 PROSITE:PS51136
EMBL:AF084479 EMBL:AF072810 EMBL:AB032253 EMBL:AC005074
EMBL:AC005089 EMBL:CH471200 EMBL:BC065029 EMBL:BC136520
IPI:IPI00069817 IPI:IPI00216695 RefSeq:NP_115784.1
UniGene:Hs.647016 PDB:1F62 PDBsum:1F62 ProteinModelPortal:Q9UIG0
SMR:Q9UIG0 DIP:DIP-35642N IntAct:Q9UIG0 MINT:MINT-1894324
STRING:Q9UIG0 PhosphoSite:Q9UIG0 DMDM:22653670 PaxDb:Q9UIG0
PRIDE:Q9UIG0 Ensembl:ENST00000339594 Ensembl:ENST00000404251
Ensembl:ENST00000573731 Ensembl:ENST00000575505 GeneID:9031
KEGG:hsa:9031 UCSC:uc003tyc.3 CTD:9031 GeneCards:GC07M072854
HGNC:HGNC:961 HPA:CAB037158 MIM:605681 neXtProt:NX_Q9UIG0
Orphanet:904 PharmGKB:PA25271 HOVERGEN:HBG050668 InParanoid:Q9UIG0
KO:K11658 OMA:CNKAFHL OrthoDB:EOG4MKNFK PhylomeDB:Q9UIG0
ChiTaRS:BAZ1B EvolutionaryTrace:Q9UIG0 GenomeRNAi:9031
NextBio:33835 Bgee:Q9UIG0 CleanEx:HS_BAZ1B Genevestigator:Q9UIG0
GermOnline:ENSG00000009954 GO:GO:0071778 GO:GO:0035173
GO:GO:0071884 GO:GO:0034725 Uniprot:Q9UIG0
Length = 1483
Score = 147 (56.8 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 26/54 (48%), Positives = 36/54 (66%)
Query: 6 DLQTEHQDYCEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
D+ E+ C+VC++ GE +ILCD C +A+HL CL P L E P+G+W CP C
Sbjct: 1179 DMSAENAR-CKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPAC 1231
Score = 35 (17.4 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 8/35 (22%), Positives = 16/35 (45%)
Query: 66 SPPAEEVKEKEVLCAKCKSPGDQFLLCETCNGSYH 100
+PP ++ + E++ +S Q L + C H
Sbjct: 1319 APPVDDAEVDELVLQTKRSSRRQSLELQKCEEILH 1353
>UNIPROTKB|F5GXF5 [details] [associations]
symbol:BPTF "Nucleosome-remodeling factor subunit BPTF"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00249 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR004022 InterPro:IPR018500
InterPro:IPR018501 Pfam:PF02791 SMART:SM00571 PROSITE:PS50827
EMBL:AC006534 EMBL:AC107377 EMBL:AC134407 HGNC:HGNC:3581
ChiTaRS:BPTF IPI:IPI00911006 Ensembl:ENST00000544778
UCSC:uc010wqm.1 ArrayExpress:F5GXF5 Uniprot:F5GXF5
Length = 2457
Score = 157 (60.3 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 10 EHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASPPA 69
++ D+C VC + G+++ C+TC YHL C+ P L+E PE +W C CV+ P A
Sbjct: 388 QYDDHCRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVCVAHKVPGVTDCVA 447
Query: 70 EEVKEK 75
E K K
Sbjct: 448 EIQKNK 453
Score = 119 (46.9 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 24/69 (34%), Positives = 36/69 (52%)
Query: 69 AEEVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKCSCPPLP 128
+E V + + C C GD L CETC+ YH C+ P+E E+P W+C C +P
Sbjct: 383 SEGVIQYDDHCRVCHKLGD-LLCCETCSAVYHLECVKPPLE-EVPEDEWQCEVCVAHKVP 440
Query: 129 GKLEDMASL 137
G + +A +
Sbjct: 441 GVTDCVAEI 449
>UNIPROTKB|C9JGA3 [details] [associations]
symbol:KDM5D "Lysine-specific demethylase 5D" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 PROSITE:PS50016
PROSITE:PS51011 SMART:SM00249 SMART:SM00501 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 EMBL:AC010889 HGNC:HGNC:11115 ChiTaRS:KDM5D
IPI:IPI00644852 ProteinModelPortal:C9JGA3 SMR:C9JGA3 STRING:C9JGA3
Ensembl:ENST00000447300 HOGENOM:HOG000174636 ArrayExpress:C9JGA3
Bgee:C9JGA3 Uniprot:C9JGA3
Length = 425
Score = 132 (51.5 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 24/55 (43%), Positives = 31/55 (56%)
Query: 15 CEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGKWSCPRCV---SDGPPE 63
C+VC +G E ++ CD C YH+ CL P L E P G W CP+C+ PPE
Sbjct: 272 CQVCSRGDEDDKLLFCDGCDDNYHIFCLLPPLPEIPRGIWRCPKCILAECKQPPE 326
Score = 105 (42.0 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 78 LCAKCK--SPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC 122
+C C D+ L C+ C+ +YH CL P+ E+P W+CPKC
Sbjct: 271 ICQVCSRGDEDDKLLFCDGCDDNYHIFCLLPPLP-EIPRGIWRCPKC 316
Score = 36 (17.7 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 7/11 (63%), Positives = 7/11 (63%)
Query: 107 PIEGELPTSGW 117
P E E TSGW
Sbjct: 409 PEEKEYATSGW 419
Score = 33 (16.7 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 8/28 (28%), Positives = 14/28 (50%)
Query: 31 PRAYHLCCLDPELDETPEGKWSCPRCVS 58
P+ L + + D+T K +CP V+
Sbjct: 198 PKMMGLGLMAKDKDKTVHKKVTCPPTVT 225
>SGD|S000003880 [details] [associations]
symbol:JHD2 "JmjC domain family histone demethylase specific
for H3-K4" species:4932 "Saccharomyces cerevisiae" [GO:0032453
"histone demethylase activity (H3-K4 specific)" evidence=IDA;IMP]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0016577 "histone demethylation" evidence=IDA;IMP] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR019787 Pfam:PF00628 Pfam:PF02373 PROSITE:PS50016
PROSITE:PS51184 SMART:SM00249 SMART:SM00558 SGD:S000003880
GO:GO:0005634 GO:GO:0005737 EMBL:BK006943 GO:GO:0046872
GO:GO:0008270 GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 eggNOG:NOG327026 GeneTree:ENSGT00530000063118
EMBL:Z49619 EMBL:Z49620 PIR:S57142 RefSeq:NP_012653.1
ProteinModelPortal:P47156 SMR:P47156 DIP:DIP-4835N IntAct:P47156
MINT:MINT-537060 STRING:P47156 PaxDb:P47156 EnsemblFungi:YJR119C
GeneID:853583 KEGG:sce:YJR119C CYGD:YJR119c HOGENOM:HOG000113131
OMA:RNISGMT OrthoDB:EOG44N21B NextBio:974376 Genevestigator:P47156
GermOnline:YJR119C GO:GO:0032453 Uniprot:P47156
Length = 728
Score = 127 (49.8 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 6 DLQTEHQDYCEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGKWSCPRCV 57
D + + D C VC++ + ILCD+C + +H+ CL P L+ P G W C C+
Sbjct: 229 DFEEDDDDACIVCRKTNDPKRTILCDSCDKPFHIYCLSPPLERVPSGDWICNTCI 283
Score = 47 (21.6 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 7/22 (31%), Positives = 15/22 (68%)
Query: 63 ETASPPAEEVKEKEVLCAKCKS 84
E + P +E +E ++ C++CK+
Sbjct: 614 EVHTDPNDEDEEYDIFCSQCKT 635
>MGI|MGI:2141847 [details] [associations]
symbol:Phrf1 "PHD and ring finger domains 1" species:10090
"Mus musculus" [GO:0005634 "nucleus" evidence=ISO] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=ISO] [GO:0035556 "intracellular signal
transduction" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0070063 "RNA polymerase binding" evidence=ISO]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR002219
InterPro:IPR019787 Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016
PROSITE:PS50089 SMART:SM00109 SMART:SM00184 SMART:SM00249
MGI:MGI:2141847 Prosite:PS00518 GO:GO:0005634 GO:GO:0035556
GO:GO:0046872 GO:GO:0008270 GO:GO:0006397 GO:GO:0006366
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS01359 InterPro:IPR017907 CTD:57661
eggNOG:NOG300312 HOVERGEN:HBG108250 OMA:YMKKLHM ChiTaRS:PHRF1
GO:GO:0070063 EMBL:AC108908 EMBL:AC163434 EMBL:BC094566
EMBL:BC138446 EMBL:BC145719 EMBL:AK129387 IPI:IPI00881116
IPI:IPI00881246 RefSeq:NP_001074587.1 UniGene:Mm.248656
ProteinModelPortal:A6H619 SMR:A6H619 STRING:A6H619 PRIDE:A6H619
Ensembl:ENSMUST00000106027 Ensembl:ENSMUST00000122143 GeneID:101471
KEGG:mmu:101471 UCSC:uc009kkb.1 UCSC:uc009kkc.1
GeneTree:ENSGT00530000063661 HOGENOM:HOG000082501 InParanoid:Q505G1
NextBio:354944 Bgee:A6H619 Genevestigator:A6H619 Uniprot:A6H619
Length = 1682
Score = 148 (57.2 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 28/71 (39%), Positives = 39/71 (54%)
Query: 8 QTEHQD--YCEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDG-- 60
+ E +D +CEVC + ++LCD C YH+ CLDP L E P +W CP C G
Sbjct: 179 EAEEEDPTFCEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQEVPVDEWFCPECTVPGVD 238
Query: 61 PPETASPPAEE 71
P A+P ++E
Sbjct: 239 PTHDAAPVSDE 249
Score = 120 (47.3 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 27/68 (39%), Positives = 37/68 (54%)
Query: 61 PPE-TASPPAEEVKEKEVLCAKC-KSPG-DQFLLCETCNGSYHPHCLPDPIEGELPTSGW 117
P E T + AEE E C C +S D+ LLC+ C+ YH CL P++ E+P W
Sbjct: 171 PVENTKACEAEE--EDPTFCEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQ-EVPVDEW 227
Query: 118 KCPKCSCP 125
CP+C+ P
Sbjct: 228 FCPECTVP 235
Score = 34 (17.0 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 133 DMASLLRLPRQHR 145
D + L R+P+ HR
Sbjct: 676 DFSKLPRIPKIHR 688
>UNIPROTKB|J9P6F3 [details] [associations]
symbol:WHSC1L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0018024 "histone-lysine N-methyltransferase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184
SMART:SM00249 SMART:SM00317 SMART:SM00570 Pfam:PF00855
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 EMBL:AAEX03010393 Ensembl:ENSCAFT00000048373
Uniprot:J9P6F3
Length = 850
Score = 151 (58.2 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 25/46 (54%), Positives = 32/46 (69%)
Query: 11 HQDYCEVCQQGGEIILCDT--CPRAYHLCCLDPELDETPEGKWSCP 54
H+DYC C GGE+++CD CP+AYHL CL+ L + P GKW CP
Sbjct: 733 HEDYCFQCGDGGELVMCDKKDCPKAYHLLCLN--LTQPPYGKWECP 776
Score = 107 (42.7 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 31/114 (27%), Positives = 47/114 (41%)
Query: 15 CEVCQQGGE-IILCD-TCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASPPAEEV 72
C++C+ G+ +I C+ C + +HL CL L P+GK+ C C +T P
Sbjct: 116 CQICESSGDSLIPCEGECCKHFHLECLG--LASVPDGKFICIEC------KTGQHP---- 163
Query: 73 KEKEVLCAKCKSPGDQFLLCET--CNGSYHPHCLPDPIEGELPTSGWKCPKCSC 124
C CK G C C YH C+ + G++CP+ C
Sbjct: 164 ------CFSCKVSGTDVKRCSVGACGKFYHEACVRKFPTAIFESKGFRCPQHCC 211
Score = 104 (41.7 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 16/39 (41%), Positives = 26/39 (66%)
Query: 18 CQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
C++GG ++ C++CP ++H CL E+ PEG W+C C
Sbjct: 330 CEKGGRLLCCESCPASFHPECLSIEM---PEGCWNCNDC 365
Score = 62 (26.9 bits), Expect = 2.2e-07, Sum P(2) = 2.2e-07
Identities = 17/58 (29%), Positives = 26/58 (44%)
Query: 69 AEEVKEKEVLCAKCKSPGDQFLLCET--CNGSYHPHCLPDPIEGELPTSGWKCPKCSC 124
AE + E C +C G + ++C+ C +YH CL + P W+CP C
Sbjct: 727 AEPKQMHEDYCFQC-GDGGELVMCDKKDCPKAYHLLCLNLT---QPPYGKWECPWHQC 780
Score = 34 (17.0 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 4/7 (57%), Positives = 6/7 (85%)
Query: 120 PKCSCPP 126
P+C+C P
Sbjct: 509 PRCNCKP 515
>UNIPROTKB|D4AB82 [details] [associations]
symbol:Trim24 "Protein Trim24" species:10116 "Rattus
norvegicus" [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 RGD:1560596
Prosite:PS00518 GO:GO:0005737 GO:GO:0045892 GO:GO:0045893
GO:GO:0008285 GO:GO:0042981 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0046777 GO:GO:0003682 GO:GO:0004672
GO:GO:0031647 GO:GO:0030163 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005719 GO:GO:0004842 GO:GO:0055074
InterPro:IPR017907 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071391 GO:GO:0034056
GO:GO:0070562 GO:GO:0005726 OrthoDB:EOG4P8FH9 IPI:IPI00566577
Ensembl:ENSRNOT00000017848 ArrayExpress:D4AB82 Uniprot:D4AB82
Length = 1048
Score = 152 (58.6 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 25/64 (39%), Positives = 37/64 (57%)
Query: 3 HIQDLQTE---HQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSD 59
H+ + + E ++D+C VCQ GGE++ C+ CP+ +HL C P L P G+W C C
Sbjct: 813 HVGETRKEDDPNEDWCAVCQNGGELLCCEKCPKVFHLTCHVPTLTHFPSGEWICTFCRDL 872
Query: 60 GPPE 63
PE
Sbjct: 873 SKPE 876
>UNIPROTKB|O15164 [details] [associations]
symbol:TRIM24 "Transcription intermediary factor 1-alpha"
species:9606 "Homo sapiens" [GO:0004672 "protein kinase activity"
evidence=IEA] [GO:0005719 "nuclear euchromatin" evidence=IEA]
[GO:0005726 "perichromatin fibrils" evidence=IEA] [GO:0008285
"negative regulation of cell proliferation" evidence=IEA]
[GO:0016922 "ligand-dependent nuclear receptor binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046777 "protein
autophosphorylation" evidence=IEA] [GO:0055074 "calcium ion
homeostasis" evidence=IEA] [GO:0070562 "regulation of vitamin D
receptor signaling pathway" evidence=IEA] [GO:0070577 "histone
acetyl-lysine binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0003713 "transcription coactivator activity"
evidence=IDA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0071391 "cellular response to estrogen stimulus" evidence=IDA]
[GO:0034056 "estrogen response element binding" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=IDA] [GO:0035064
"methylated histone residue binding" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0002039 "p53 binding"
evidence=IPI] [GO:0042981 "regulation of apoptotic process"
evidence=IMP] [GO:0031647 "regulation of protein stability"
evidence=IMP] [GO:0030163 "protein catabolic process" evidence=IMP]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005102
"receptor binding" evidence=TAS] [GO:0006366 "transcription from
RNA polymerase II promoter" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00249 SMART:SM00297
SMART:SM00336 SMART:SM00502 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005829 GO:GO:0005634 Reactome:REACT_116125 GO:GO:0045892
GO:GO:0045893 GO:GO:0008285 GO:GO:0042981 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0005102 GO:GO:0046777
GO:GO:0003682 GO:GO:0004672 GO:GO:0031647 GO:GO:0003713
GO:GO:0006366 GO:GO:0030163 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005719 GO:GO:0004842 EMBL:CH236950
EMBL:CH471070 GO:GO:0055074 InterPro:IPR017907 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076 GO:GO:0070577
InterPro:IPR018359 GO:GO:0071391 MIM:188550 Orphanet:146
GO:GO:0034056 PDB:3O34 PDB:3O35 PDB:3O37 PDBsum:3O34 PDBsum:3O35
PDBsum:3O37 PDB:3O36 PDBsum:3O36 GO:GO:0070562 GO:GO:0005726
EMBL:AC013429 EMBL:AF009353 EMBL:AF119042 EMBL:AK075306
EMBL:AC008265 EMBL:BC028689 IPI:IPI00005184 IPI:IPI00184317
RefSeq:NP_003843.3 RefSeq:NP_056989.2 UniGene:Hs.490287 PDB:2YYN
PDB:3O33 PDBsum:2YYN PDBsum:3O33 ProteinModelPortal:O15164
SMR:O15164 DIP:DIP-52713N IntAct:O15164 STRING:O15164
PhosphoSite:O15164 PaxDb:O15164 PRIDE:O15164 DNASU:8805
Ensembl:ENST00000343526 Ensembl:ENST00000415680 GeneID:8805
KEGG:hsa:8805 UCSC:uc003vub.3 UCSC:uc003vuc.3 CTD:8805
GeneCards:GC07P138144 HGNC:HGNC:11812 HPA:HPA043495 MIM:603406
neXtProt:NX_O15164 PharmGKB:PA36519 HOGENOM:HOG000252971
HOVERGEN:HBG054599 InParanoid:O15164 KO:K08881 OMA:FWAQNIF
OrthoDB:EOG4P8FH9 PhylomeDB:O15164 ChiTaRS:TRIM24
EvolutionaryTrace:O15164 GenomeRNAi:8805 NextBio:33028
ArrayExpress:O15164 Bgee:O15164 CleanEx:HS_TRIM24
Genevestigator:O15164 GermOnline:ENSG00000122779 Uniprot:O15164
Length = 1050
Score = 152 (58.6 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 25/64 (39%), Positives = 37/64 (57%)
Query: 3 HIQDLQTE---HQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSD 59
H+ + + E ++D+C VCQ GGE++ C+ CP+ +HL C P L P G+W C C
Sbjct: 814 HVGETRKEDDPNEDWCAVCQNGGELLCCEKCPKVFHLSCHVPTLTNFPSGEWICTFCRDL 873
Query: 60 GPPE 63
PE
Sbjct: 874 SKPE 877
>MGI|MGI:109275 [details] [associations]
symbol:Trim24 "tripartite motif-containing 24" species:10090
"Mus musculus" [GO:0002039 "p53 binding" evidence=ISO;IPI]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=ISO;IDA] [GO:0003713 "transcription coactivator
activity" evidence=ISO;IDA] [GO:0004672 "protein kinase activity"
evidence=IDA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005719 "nuclear euchromatin" evidence=IDA]
[GO:0005726 "perichromatin fibrils" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006468 "protein phosphorylation" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=ISO] [GO:0008285 "negative
regulation of cell proliferation" evidence=IGI;IMP] [GO:0010628
"positive regulation of gene expression" evidence=IGI;IMP]
[GO:0016567 "protein ubiquitination" evidence=ISO;IDA] [GO:0016874
"ligase activity" evidence=IEA] [GO:0016922 "ligand-dependent
nuclear receptor binding" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=ISO;IMP] [GO:0031647 "regulation of
protein stability" evidence=ISO;IMP] [GO:0034056 "estrogen response
element binding" evidence=ISO] [GO:0042981 "regulation of apoptotic
process" evidence=ISO;IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IGI]
[GO:0046777 "protein autophosphorylation" evidence=IDA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0055074 "calcium ion
homeostasis" evidence=IMP] [GO:0070562 "regulation of vitamin D
receptor signaling pathway" evidence=IMP] [GO:0070577 "histone
acetyl-lysine binding" evidence=ISO] [GO:0071391 "cellular response
to estrogen stimulus" evidence=ISO] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 UniPathway:UPA00143
MGI:MGI:109275 Prosite:PS00518 GO:GO:0005737 GO:GO:0045892
GO:GO:0045893 GO:GO:0008285 GO:GO:0042981 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0046777 GO:GO:0006351
GO:GO:0003682 GO:GO:0004672 GO:GO:0031647 GO:GO:0003713
GO:GO:0030163 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005719 GO:GO:0004842 GO:GO:0055074
InterPro:IPR017907 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 GO:GO:0070577 InterPro:IPR018359
GO:GO:0016922 GO:GO:0071391 GO:GO:0034056 GO:GO:0070562
GO:GO:0005726 CTD:8805 HOGENOM:HOG000252971 HOVERGEN:HBG054599
KO:K08881 OMA:FWAQNIF OrthoDB:EOG4P8FH9 ChiTaRS:TRIM24 EMBL:S78221
EMBL:S78219 EMBL:BC056959 IPI:IPI00131130 IPI:IPI00227778
PIR:S55259 RefSeq:NP_001258993.1 RefSeq:NP_659542.3
UniGene:Mm.41063 ProteinModelPortal:Q64127 SMR:Q64127
DIP:DIP-31476N IntAct:Q64127 STRING:Q64127 PhosphoSite:Q64127
PaxDb:Q64127 PRIDE:Q64127 Ensembl:ENSMUST00000031859
Ensembl:ENSMUST00000120428 GeneID:21848 KEGG:mmu:21848
UCSC:uc009bjk.1 UCSC:uc009bjl.1 GeneTree:ENSGT00530000062982
InParanoid:Q64127 NextBio:301326 Bgee:Q64127 CleanEx:MM_TRIM24
Genevestigator:Q64127 GermOnline:ENSMUSG00000029833 Uniprot:Q64127
Length = 1051
Score = 152 (58.6 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 25/64 (39%), Positives = 37/64 (57%)
Query: 3 HIQDLQTE---HQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSD 59
H+ + + E ++D+C VCQ GGE++ C+ CP+ +HL C P L P G+W C C
Sbjct: 815 HVGETRKEDDPNEDWCAVCQNGGELLCCEKCPKVFHLTCHVPTLTNFPSGEWICTFCRDL 874
Query: 60 GPPE 63
PE
Sbjct: 875 SKPE 878
>UNIPROTKB|I3LBT0 [details] [associations]
symbol:I3LBT0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR000315 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR003649 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF00643 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50119 SMART:SM00249 SMART:SM00297
SMART:SM00336 SMART:SM00502 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
GeneTree:ENSGT00530000062982 Ensembl:ENSSSCT00000029002
Uniprot:I3LBT0
Length = 945
Score = 151 (58.2 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 34/105 (32%), Positives = 48/105 (45%)
Query: 11 HQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASPPAE 70
++D+C VCQ GG+++ C+ CP+ +HL C P L P G W C C G PE
Sbjct: 704 NEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDIGKPEVEYDCDN 763
Query: 71 EVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTS 115
K+ + SP DQ CE + H L + +P S
Sbjct: 764 LQHSKKGKTVQGLSPVDQ-RKCERLLLYLYCHELSIEFQEPVPAS 807
>UNIPROTKB|I3LD78 [details] [associations]
symbol:I3LD78 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] InterPro:IPR000315 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR003649 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF00643 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50119 SMART:SM00249 SMART:SM00297
SMART:SM00336 SMART:SM00502 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
GeneTree:ENSGT00530000062982 Ensembl:ENSSSCT00000022292 OMA:HCLELED
Uniprot:I3LD78
Length = 948
Score = 151 (58.2 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 34/105 (32%), Positives = 48/105 (45%)
Query: 11 HQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASPPAE 70
++D+C VCQ GG+++ C+ CP+ +HL C P L P G W C C G PE
Sbjct: 707 NEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDIGKPEVEYDCDN 766
Query: 71 EVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTS 115
K+ + SP DQ CE + H L + +P S
Sbjct: 767 LQHSKKGKTVQGLSPVDQ-RKCERLLLYLYCHELSIEFQEPVPAS 810
>UNIPROTKB|H7C0U2 [details] [associations]
symbol:ZMYND8 "Protein kinase C-binding protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR002893
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01753
PRINTS:PR00503 PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50865 SMART:SM00249 SMART:SM00297 Pfam:PF00855
EMBL:CH471077 GO:GO:0046872 GO:GO:0008270 GO:GO:0016301
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.20.920.10 SUPFAM:SSF47370 InterPro:IPR000313
PROSITE:PS50812 EMBL:AL049540 EMBL:AL031666 UniGene:Hs.446240
UniGene:Hs.658553 UniGene:Hs.668465 HGNC:HGNC:9397
InterPro:IPR021931 Pfam:PF12064 EMBL:AL390212 SMR:H7C0U2
Ensembl:ENST00000446994 Uniprot:H7C0U2
Length = 1105
Score = 139 (54.0 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 22/46 (47%), Positives = 28/46 (60%)
Query: 14 YCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSD 59
YC VC + G+++ C+ CPR YH CL L PEG W CP C +D
Sbjct: 65 YCWVCHREGQVLCCELCPRVYHAKCL--RLTSEPEGDWFCPECETD 108
Score = 38 (18.4 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 70 EEVKEKEVLCAKCKSPGDQFLLCETCNGSY 99
+E K+K+ CA CK F C N SY
Sbjct: 911 DETKKKQ-WCANCKKEAI-FYCC--WNTSY 936
Score = 34 (17.0 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 7/12 (58%), Positives = 7/12 (58%)
Query: 117 WKCPKCSCP-PL 127
W C CS P PL
Sbjct: 206 WFCEPCSNPHPL 217
>UNIPROTKB|F1PT90 [details] [associations]
symbol:TRIM66 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] InterPro:IPR001841
InterPro:IPR000315 InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR003649 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF00643 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00249 SMART:SM00297
SMART:SM00336 SMART:SM00502 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
GeneTree:ENSGT00530000062982 OMA:HMENERA EMBL:AAEX03012891
Ensembl:ENSCAFT00000011106 Uniprot:F1PT90
Length = 1374
Score = 146 (56.5 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 25/54 (46%), Positives = 32/54 (59%)
Query: 10 EHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPE 63
E++D+C VC GGE++ CD CP+ +HL C P L P G W C C S PE
Sbjct: 1126 ENEDFCAVCLNGGELLCCDRCPKVFHLSCHLPALLGFPGGDWVCTLCRSLTQPE 1179
Score = 33 (16.7 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 5/21 (23%), Positives = 10/21 (47%)
Query: 105 PDPIEGELPTSGWKCPKCSCP 125
P+ + ++ W C K + P
Sbjct: 1263 PEEVVSDVRLMFWNCAKFNYP 1283
>UNIPROTKB|E2RNG5 [details] [associations]
symbol:LOC609728 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR003649 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF00643 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50119
SMART:SM00184 SMART:SM00249 SMART:SM00297 SMART:SM00336
SMART:SM00502 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR017907 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 OMA:FWAQNIF
GeneTree:ENSGT00530000062982 EMBL:AAEX03010233
Ensembl:ENSCAFT00000006974 Uniprot:E2RNG5
Length = 1052
Score = 151 (58.2 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 25/64 (39%), Positives = 37/64 (57%)
Query: 3 HIQDLQTE---HQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSD 59
H+ + + E ++D+C VCQ GGE++ C+ CP+ +HL C P L P G+W C C
Sbjct: 816 HVGETRKEDDPNEDWCAVCQNGGELLCCEKCPKVFHLSCHVPTLANFPSGEWICTFCRDL 875
Query: 60 GPPE 63
PE
Sbjct: 876 SKPE 879
>RGD|708360 [details] [associations]
symbol:Phrf1 "PHD and ring finger domains 1" species:10116
"Rattus norvegicus" [GO:0006366 "transcription from RNA polymerase
II promoter" evidence=IMP] [GO:0006397 "mRNA processing"
evidence=IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IMP]
[GO:0070063 "RNA polymerase binding" evidence=IPI]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016 PROSITE:PS50089
SMART:SM00184 SMART:SM00249 RGD:708360 Prosite:PS00518
GO:GO:0019904 GO:GO:0046872 GO:GO:0008270 GO:GO:0006397
GO:GO:0006366 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR017907 EMBL:AC118351 CTD:57661
eggNOG:NOG300312 HOVERGEN:HBG108250 OMA:YMKKLHM OrthoDB:EOG4MSD0F
GeneTree:ENSGT00530000063661 HOGENOM:HOG000082501 EMBL:U49057
IPI:IPI00211009 IPI:IPI00915115 PIR:T31422 RefSeq:NP_620793.1
UniGene:Rn.10530 ProteinModelPortal:Q63625 STRING:Q63625
PRIDE:Q63625 Ensembl:ENSRNOT00000023376 Ensembl:ENSRNOT00000051755
GeneID:245925 KEGG:rno:245925 UCSC:RGD:708360 InParanoid:Q63625
NextBio:623186 ArrayExpress:Q63625 Genevestigator:Q63625
Uniprot:Q63625
Length = 1685
Score = 153 (58.9 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 29/74 (39%), Positives = 41/74 (55%)
Query: 5 QDLQTEHQD--YCEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSD 59
+D + E +D +CEVC + ++LCD C YH+ CLDP L E P +W CP C
Sbjct: 179 EDEEAEEEDPTFCEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQEVPVDEWFCPECAVP 238
Query: 60 G--PPETASPPAEE 71
G P A+P ++E
Sbjct: 239 GVDPTHDAAPVSDE 252
Score = 122 (48.0 bits), Expect = 8.9e-07, Sum P(2) = 8.9e-07
Identities = 23/59 (38%), Positives = 35/59 (59%)
Query: 70 EEVKEKE-VLCAKC-KSPG-DQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKCSCP 125
EE +E++ C C +S D+ LLC+ C+ YH CL P++ E+P W CP+C+ P
Sbjct: 181 EEAEEEDPTFCEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQ-EVPVDEWFCPECAVP 238
Score = 33 (16.7 bits), Expect = 8.9e-07, Sum P(2) = 8.9e-07
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 59 DGPPETASPP-AEEVKE 74
DGPP+ S A + +E
Sbjct: 17 DGPPQVGSSELASDAEE 33
>UNIPROTKB|Q63625 [details] [associations]
symbol:Phrf1 "PHD and RING finger domain-containing protein
1" species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016
PROSITE:PS50089 SMART:SM00184 SMART:SM00249 RGD:708360
Prosite:PS00518 GO:GO:0019904 GO:GO:0046872 GO:GO:0008270
GO:GO:0006397 GO:GO:0006366 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR017907 EMBL:AC118351 CTD:57661
eggNOG:NOG300312 HOVERGEN:HBG108250 OMA:YMKKLHM OrthoDB:EOG4MSD0F
GeneTree:ENSGT00530000063661 HOGENOM:HOG000082501 EMBL:U49057
IPI:IPI00211009 IPI:IPI00915115 PIR:T31422 RefSeq:NP_620793.1
UniGene:Rn.10530 ProteinModelPortal:Q63625 STRING:Q63625
PRIDE:Q63625 Ensembl:ENSRNOT00000023376 Ensembl:ENSRNOT00000051755
GeneID:245925 KEGG:rno:245925 UCSC:RGD:708360 InParanoid:Q63625
NextBio:623186 ArrayExpress:Q63625 Genevestigator:Q63625
Uniprot:Q63625
Length = 1685
Score = 153 (58.9 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 29/74 (39%), Positives = 41/74 (55%)
Query: 5 QDLQTEHQD--YCEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSD 59
+D + E +D +CEVC + ++LCD C YH+ CLDP L E P +W CP C
Sbjct: 179 EDEEAEEEDPTFCEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQEVPVDEWFCPECAVP 238
Query: 60 G--PPETASPPAEE 71
G P A+P ++E
Sbjct: 239 GVDPTHDAAPVSDE 252
Score = 122 (48.0 bits), Expect = 8.9e-07, Sum P(2) = 8.9e-07
Identities = 23/59 (38%), Positives = 35/59 (59%)
Query: 70 EEVKEKE-VLCAKC-KSPG-DQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKCSCP 125
EE +E++ C C +S D+ LLC+ C+ YH CL P++ E+P W CP+C+ P
Sbjct: 181 EEAEEEDPTFCEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQ-EVPVDEWFCPECAVP 238
Score = 33 (16.7 bits), Expect = 8.9e-07, Sum P(2) = 8.9e-07
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 59 DGPPETASPP-AEEVKE 74
DGPP+ S A + +E
Sbjct: 17 DGPPQVGSSELASDAEE 33
>UNIPROTKB|F1SHC3 [details] [associations]
symbol:MLL2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008168 "methyltransferase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] Pfam:PF00856 InterPro:IPR009071 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR003888 InterPro:IPR003889
InterPro:IPR019787 Pfam:PF00628 Pfam:PF05964 Pfam:PF05965
PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51542 PROSITE:PS51543
SMART:SM00249 SMART:SM00317 SMART:SM00541 SMART:SM00542
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 SMART:SM00398
SUPFAM:SSF47095 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0008168 InterPro:IPR003616
PROSITE:PS50868 GeneTree:ENSGT00690000101661 EMBL:CU633660
EMBL:CU633656 Ensembl:ENSSSCT00000000204 Uniprot:F1SHC3
Length = 5080
Score = 144 (55.7 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 33/89 (37%), Positives = 41/89 (46%)
Query: 15 CEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASPPAE- 70
CEVC Q + ++LCD C +YH CLDP L P+G W C CVS ASP
Sbjct: 983 CEVCGQASDPSRLLLCDDCDISYHTYCLDPPLLTVPKGGWKCKWCVSCMQCGAASPGFHC 1042
Query: 71 EVKEKEVLCAKCKSPGDQFLLCETCNGSY 99
E + C C S + C C+ Y
Sbjct: 1043 EWQNSYTHCGPCAS----LVTCPICHAPY 1067
Score = 110 (43.8 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 21/51 (41%), Positives = 29/51 (56%)
Query: 77 VLCAKCKSPGD--QFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC-SC 124
++C C D + LLC+ C+ SYH +CL P+ +P GWKC C SC
Sbjct: 981 IVCEVCGQASDPSRLLLCDDCDISYHTYCLDPPLL-TVPKGGWKCKWCVSC 1030
Score = 46 (21.3 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 107 PIEGELPTSGWKCPKCSCPPL---PGKLEDMASLL 138
P E +LPT+ PK PP PG++ A+ L
Sbjct: 3881 PSEAQLPTAQPGTPKPQGPPSELPPGRVSPAAAQL 3915
Score = 44 (20.5 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 8/17 (47%), Positives = 9/17 (52%)
Query: 38 CLDPELDETPEGKWSCP 54
CL P +E PE CP
Sbjct: 412 CLSPRPEEPPEEPGLCP 428
Score = 37 (18.1 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 11/28 (39%), Positives = 11/28 (39%)
Query: 105 PDPIEGELPTSGWKCPKCSCPPLPGKLE 132
P P EL S P P LP LE
Sbjct: 2496 PAPAAPELNNSLHPAPHTKGPNLPAGLE 2523
>UNIPROTKB|I3LTW9 [details] [associations]
symbol:MLL2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0043627 "response
to estrogen stimulus" evidence=IEA] [GO:0035097 "histone
methyltransferase complex" evidence=IEA] [GO:0033148 "positive
regulation of intracellular estrogen receptor signaling pathway"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00856 InterPro:IPR009071 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR003888 InterPro:IPR003889
InterPro:IPR019787 Pfam:PF00628 Pfam:PF05964 Pfam:PF05965
PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51542 PROSITE:PS51543
SMART:SM00249 SMART:SM00317 SMART:SM00541 SMART:SM00542
GO:GO:0046872 GO:GO:0008284 GO:GO:0008270 GO:GO:0045944
SMART:SM00398 SUPFAM:SSF47095 GO:GO:0044212 GO:GO:0043627
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0008168 GO:GO:0033148 InterPro:IPR003616
PROSITE:PS50868 GO:GO:0035097 GeneTree:ENSGT00690000101661
OMA:PPNLGFV EMBL:CU633660 EMBL:CU633656 Ensembl:ENSSSCT00000031953
Uniprot:I3LTW9
Length = 5114
Score = 144 (55.7 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 33/89 (37%), Positives = 41/89 (46%)
Query: 15 CEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASPPAE- 70
CEVC Q + ++LCD C +YH CLDP L P+G W C CVS ASP
Sbjct: 1017 CEVCGQASDPSRLLLCDDCDISYHTYCLDPPLLTVPKGGWKCKWCVSCMQCGAASPGFHC 1076
Query: 71 EVKEKEVLCAKCKSPGDQFLLCETCNGSY 99
E + C C S + C C+ Y
Sbjct: 1077 EWQNSYTHCGPCAS----LVTCPICHAPY 1101
Score = 110 (43.8 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 21/51 (41%), Positives = 29/51 (56%)
Query: 77 VLCAKCKSPGD--QFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC-SC 124
++C C D + LLC+ C+ SYH +CL P+ +P GWKC C SC
Sbjct: 1015 IVCEVCGQASDPSRLLLCDDCDISYHTYCLDPPLL-TVPKGGWKCKWCVSC 1064
Score = 46 (21.3 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
Identities = 13/35 (37%), Positives = 18/35 (51%)
Query: 107 PIEGELPTSGWKCPKCSCPPL---PGKLEDMASLL 138
P E +LPT+ PK PP PG++ A+ L
Sbjct: 3915 PSEAQLPTAQPGTPKPQGPPSELPPGRVSPAAAQL 3949
Score = 44 (20.5 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 8/17 (47%), Positives = 9/17 (52%)
Query: 38 CLDPELDETPEGKWSCP 54
CL P +E PE CP
Sbjct: 446 CLSPRPEEPPEEPGLCP 462
Score = 37 (18.1 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 11/28 (39%), Positives = 11/28 (39%)
Query: 105 PDPIEGELPTSGWKCPKCSCPPLPGKLE 132
P P EL S P P LP LE
Sbjct: 2530 PAPAAPELNNSLHPAPHTKGPNLPAGLE 2557
>UNIPROTKB|F1MP49 [details] [associations]
symbol:TRIM24 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071391 "cellular response to estrogen stimulus"
evidence=IEA] [GO:0070577 "histone acetyl-lysine binding"
evidence=IEA] [GO:0070562 "regulation of vitamin D receptor
signaling pathway" evidence=IEA] [GO:0055074 "calcium ion
homeostasis" evidence=IEA] [GO:0046777 "protein
autophosphorylation" evidence=IEA] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0042981 "regulation of apoptotic process" evidence=IEA]
[GO:0034056 "estrogen response element binding" evidence=IEA]
[GO:0031647 "regulation of protein stability" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0016922
"ligand-dependent nuclear receptor binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005726 "perichromatin
fibrils" evidence=IEA] [GO:0005719 "nuclear euchromatin"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0004672 "protein kinase activity" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0002039 "p53
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089
PROSITE:PS50119 SMART:SM00184 SMART:SM00249 SMART:SM00297
SMART:SM00336 SMART:SM00502 Prosite:PS00518 GO:GO:0005737
GO:GO:0045892 GO:GO:0045893 GO:GO:0008285 GO:GO:0042981
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0046777
GO:GO:0003682 GO:GO:0004672 GO:GO:0031647 GO:GO:0030163
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0005719
GO:GO:0004842 GO:GO:0055074 InterPro:IPR017907 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071391
GO:GO:0034056 GO:GO:0070562 GO:GO:0005726 OMA:FWAQNIF
GeneTree:ENSGT00530000062982 EMBL:DAAA02011697 EMBL:DAAA02011696
IPI:IPI01000481 Ensembl:ENSBTAT00000003151 Uniprot:F1MP49
Length = 1053
Score = 150 (57.9 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 25/64 (39%), Positives = 37/64 (57%)
Query: 3 HIQDLQTE---HQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSD 59
H +++ E ++D+C VCQ GGE++ C+ CP+ +HL C P L P G+W C C
Sbjct: 817 HAGEMRKEDDPNEDWCAVCQNGGELLCCEKCPKVFHLSCHVPTLANFPSGEWICTFCRDL 876
Query: 60 GPPE 63
PE
Sbjct: 877 SKPE 880
>UNIPROTKB|Q38JA7 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016706 "oxidoreductase activity,
acting on paired donors, with incorporation or reduction of
molecular oxygen, 2-oxoglutarate as one donor, and incorporation of
one atom each of oxygen into both donors" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006351 GO:GO:0016568 GO:GO:0016706
GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 HSSP:O43918
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
eggNOG:NOG327026 KO:K11446 EMBL:DQ223016 RefSeq:NP_001041497.1
UniGene:Cfa.46487 ProteinModelPortal:Q38JA7 SMR:Q38JA7 PRIDE:Q38JA7
GeneID:491894 KEGG:cfa:491894 CTD:8242 InParanoid:Q38JA7
OrthoDB:EOG4894KP NextBio:20864597 Uniprot:Q38JA7
Length = 1556
Score = 134 (52.2 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 25/55 (45%), Positives = 32/55 (58%)
Query: 15 CEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVS---DGPPE 63
C +C +G E ++LCD C YH+ CL P L E P+G W CP+CV PPE
Sbjct: 327 CRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWRCPKCVMAECKRPPE 381
Score = 110 (43.8 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 78 LCAKCK--SPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC 122
+C C D+ LLC+ C+ +YH CL P+ E+P W+CPKC
Sbjct: 326 VCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLP-EIPKGVWRCPKC 371
Score = 45 (20.9 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 18/63 (28%), Positives = 28/63 (44%)
Query: 64 TASPPAEEVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKCS 123
++ P AEE +E+E L + G L T + S + + +E L TSG P +
Sbjct: 1481 SSGPEAEEAQEEEELEEETGGEGPPQTLPTTGSPSTQEN--QNGLEPALATSGPSAPFST 1538
Query: 124 CPP 126
P
Sbjct: 1539 LSP 1541
Score = 37 (18.1 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 6/16 (37%), Positives = 10/16 (62%)
Query: 16 EVCQQGGEIILCDTCP 31
E+ Q G ++ C+T P
Sbjct: 165 EMYQSGANLVQCNTRP 180
Score = 36 (17.7 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 7/11 (63%), Positives = 7/11 (63%)
Query: 107 PIEGELPTSGW 117
P E E TSGW
Sbjct: 464 PEEEEYATSGW 474
Score = 33 (16.7 bits), Expect = 4.3e-08, Sum P(2) = 4.3e-08
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 61 PPETASPPAEEVKEKEV 77
PP AS P E K++
Sbjct: 1328 PPAPASDPLREGSGKDM 1344
>UNIPROTKB|O14686 [details] [associations]
symbol:MLL2 "Histone-lysine N-methyltransferase MLL2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0018024 "histone-lysine N-methyltransferase
activity" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0005634 "nucleus" evidence=NAS]
[GO:0003677 "DNA binding" evidence=NAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0033148 "positive
regulation of intracellular estrogen receptor signaling pathway"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0043627 "response to estrogen stimulus"
evidence=IDA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0051568 "histone H3-K4 methylation" evidence=ISS] [GO:0006342
"chromatin silencing" evidence=ISS] [GO:0001555 "oocyte growth"
evidence=ISS] [GO:0048477 "oogenesis" evidence=ISS] [GO:0035097
"histone methyltransferase complex" evidence=IPI] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR009071 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR003888 InterPro:IPR003889 InterPro:IPR019787
Pfam:PF00628 Pfam:PF05964 Pfam:PF05965 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50280 PROSITE:PS51542 PROSITE:PS51543
SMART:SM00184 SMART:SM00249 SMART:SM00317 SMART:SM00541
SMART:SM00542 Prosite:PS00518 GO:GO:0046872 GO:GO:0008284
GO:GO:0008270 GO:GO:0045944 GO:GO:0006351 SMART:SM00398
SUPFAM:SSF47095 GO:GO:0044212 GO:GO:0043627 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS01359 GO:GO:0006342 GO:GO:0033148 eggNOG:COG2940
GO:GO:0018024 InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GO:GO:0051568 GO:GO:0035097 EMBL:AC011603 GO:GO:0001555
Orphanet:2322 EMBL:AF010403 EMBL:AF010404 IPI:IPI00297859
IPI:IPI00377245 PIR:T03454 PIR:T03455 RefSeq:NP_003473.3
UniGene:Hs.731384 PDB:3UVK PDB:4ERQ PDBsum:3UVK PDBsum:4ERQ
ProteinModelPortal:O14686 SMR:O14686 DIP:DIP-37875N IntAct:O14686
MINT:MINT-1192941 STRING:O14686 PhosphoSite:O14686 PaxDb:O14686
PRIDE:O14686 Ensembl:ENST00000301067 GeneID:8085 KEGG:hsa:8085
UCSC:uc001rta.4 CTD:8085 GeneCards:GC12M049412 HGNC:HGNC:7133
HPA:HPA035977 MIM:147920 MIM:602113 neXtProt:NX_O14686
PharmGKB:PA30846 HOVERGEN:HBG006738 InParanoid:O14686 KO:K09187
OMA:PPNLGFV ChiTaRS:MLL2 GenomeRNAi:8085 NextBio:30706
ArrayExpress:O14686 Bgee:O14686 CleanEx:HS_MLL2
Genevestigator:O14686 GermOnline:ENSG00000167548 Uniprot:O14686
Length = 5537
Score = 144 (55.7 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 33/89 (37%), Positives = 41/89 (46%)
Query: 15 CEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASPPAE- 70
CEVC Q + ++LCD C +YH CLDP L P+G W C CVS ASP
Sbjct: 1430 CEVCGQASDPSRLLLCDDCDISYHTYCLDPPLLTVPKGGWKCKWCVSCMQCGAASPGFHC 1489
Query: 71 EVKEKEVLCAKCKSPGDQFLLCETCNGSY 99
E + C C S + C C+ Y
Sbjct: 1490 EWQNSYTHCGPCAS----LVTCPICHAPY 1514
Score = 133 (51.9 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 32/109 (29%), Positives = 50/109 (45%)
Query: 15 CEVCQQGG---EIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCV---SDGPPETASPP 68
C+ C++ G ++++C+TC + YH CL P ++E P W C C + G P
Sbjct: 276 CQACRKPGNDSKMLVCETCDKGYHTFCLKPPMEELPAHSWKCKACRVCRACGAGSAELNP 335
Query: 69 AEEVKEKEVLCAKC-KSPGDQFLLCETCNGSYHPHC--LPDPIEGELPT 114
E E LC +C K+ G Q + + + P C P G+ PT
Sbjct: 336 NSEWFENYSLCHRCHKAQGGQTI--RSVAEQHTPVCSRFSPPEPGDTPT 382
Score = 130 (50.8 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 78 LCAKCKSPGD--QFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC 122
+C C+ PG+ + L+CETC+ YH CL P+E ELP WKC C
Sbjct: 275 VCQACRKPGNDSKMLVCETCDKGYHTFCLKPPME-ELPAHSWKCKAC 320
Score = 124 (48.7 bits), Expect = 8.6e-06, P = 8.6e-06
Identities = 33/112 (29%), Positives = 47/112 (41%)
Query: 15 CEVCQQGGEIILCDT--CPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASPPAEEV 72
C C + G I C + CPR YH C T G + + + PE + A
Sbjct: 172 CSHCTRLGASIPCRSPGCPRLYHFPCA------TASGSFLSMKTLQLLCPEHSEGAAYL- 224
Query: 73 KEKEVLCAKCKSPGD--QFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC 122
+E CA C+ PG+ C +C YH CL + +GW+CP+C
Sbjct: 225 --EEARCAVCEGPGELCDLFFCTSCGHHYHGACLDTALTAR-KRAGWQCPEC 273
Score = 110 (43.8 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 21/51 (41%), Positives = 29/51 (56%)
Query: 77 VLCAKCKSPGD--QFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC-SC 124
++C C D + LLC+ C+ SYH +CL P+ +P GWKC C SC
Sbjct: 1428 IVCEVCGQASDPSRLLLCDDCDISYHTYCLDPPLL-TVPKGGWKCKWCVSC 1477
Score = 46 (21.3 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 14/32 (43%), Positives = 16/32 (50%)
Query: 98 SYHPHCL-PDPIEGELPTSGWKCPKCSCPPLP 128
S PH L P+ + G L SG K S PP P
Sbjct: 2910 SEDPHRLAPEGLRG-LAVSGLPPQKPSAPPAP 2940
Score = 42 (19.8 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 9/26 (34%), Positives = 10/26 (38%)
Query: 54 PRCVSDGPPETASPPAEEVKEKEVLC 79
P C PPE P +E V C
Sbjct: 367 PVCSRFSPPEPGDTPTDEPDALYVAC 392
Score = 40 (19.1 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 12/35 (34%), Positives = 17/35 (48%)
Query: 107 PIEGELPTSGWKCPKCSCP---PLPGKLEDMASLL 138
P E +LP + PK P P PG++ A+ L
Sbjct: 4331 PTEAQLPPTHPGTPKPQGPTLEPPPGRVSPAAAQL 4365
>UNIPROTKB|F1P4C7 [details] [associations]
symbol:TRIM24 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0002039 "p53 binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003713 "transcription
coactivator activity" evidence=IEA] [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005719 "nuclear euchromatin"
evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0031647 "regulation
of protein stability" evidence=IEA] [GO:0034056 "estrogen response
element binding" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0046777 "protein
autophosphorylation" evidence=IEA] [GO:0055074 "calcium ion
homeostasis" evidence=IEA] [GO:0070562 "regulation of vitamin D
receptor signaling pathway" evidence=IEA] [GO:0070577 "histone
acetyl-lysine binding" evidence=IEA] [GO:0071391 "cellular response
to estrogen stimulus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0016922 "ligand-dependent nuclear receptor
binding" evidence=ISS] InterPro:IPR000315 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR003649 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF00643 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 GO:GO:0005737
GO:GO:0045892 GO:GO:0045893 GO:GO:0008285 GO:GO:0042981
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0046777
GO:GO:0003682 GO:GO:0004672 GO:GO:0031647 GO:GO:0030163
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0005719
GO:GO:0004842 GO:GO:0055074 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0016922 GO:GO:0071391
GO:GO:0034056 GO:GO:0070562 GO:GO:0005726 OMA:FWAQNIF
GeneTree:ENSGT00530000062982 EMBL:AADN02006351 EMBL:AADN02006352
IPI:IPI00591737 Ensembl:ENSGALT00000020916 Uniprot:F1P4C7
Length = 928
Score = 149 (57.5 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 23/53 (43%), Positives = 32/53 (60%)
Query: 11 HQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPE 63
++D+C VCQ GGE++ C+ CP+ +HL C P L P G+W C C PE
Sbjct: 703 NEDWCAVCQNGGELLCCEKCPKVFHLSCHVPSLMSFPSGEWICTFCRDLSKPE 755
>UNIPROTKB|B7ZL11 [details] [associations]
symbol:WHSC1L1 "Histone-lysine N-methyltransferase NSD3"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0018024 "histone-lysine N-methyltransferase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184
SMART:SM00249 SMART:SM00317 SMART:SM00570 Pfam:PF00855
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868 InterPro:IPR000313
PROSITE:PS50812 SMART:SM00293 EMBL:AC087362 EMBL:AC087623
HOVERGEN:HBG079979 UniGene:Hs.608111 HGNC:HGNC:12767
ChiTaRS:WHSC1L1 EMBL:BC143510 IPI:IPI00980085 SMR:B7ZL11
STRING:B7ZL11 Ensembl:ENST00000527502 UCSC:uc011lbm.2
Uniprot:B7ZL11
Length = 1426
Score = 151 (58.2 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 25/46 (54%), Positives = 32/46 (69%)
Query: 11 HQDYCEVCQQGGEIILCDT--CPRAYHLCCLDPELDETPEGKWSCP 54
H+DYC C GGE+++CD CP+AYHL CL+ L + P GKW CP
Sbjct: 1309 HEDYCFQCGDGGELVMCDKKDCPKAYHLLCLN--LTQPPYGKWECP 1352
Score = 104 (41.7 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 16/39 (41%), Positives = 26/39 (66%)
Query: 18 CQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
C++GG ++ C++CP ++H CL E+ PEG W+C C
Sbjct: 917 CEKGGRLLCCESCPASFHPECLSIEM---PEGCWNCNDC 952
Score = 58 (25.5 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 15/51 (29%), Positives = 23/51 (45%)
Query: 76 EVLCAKCKSPGDQFLLCET--CNGSYHPHCLPDPIEGELPTSGWKCPKCSC 124
E C +C G + ++C+ C +YH CL + P W+CP C
Sbjct: 1310 EDYCFQC-GDGGELVMCDKKDCPKAYHLLCLNLT---QPPYGKWECPWHQC 1356
Score = 34 (17.0 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 4/7 (57%), Positives = 6/7 (85%)
Query: 120 PKCSCPP 126
P+C+C P
Sbjct: 1096 PRCNCKP 1102
>UNIPROTKB|F1RZJ3 [details] [associations]
symbol:WHSC1L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0018024 "histone-lysine N-methyltransferase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR006560
InterPro:IPR019787 PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215
SMART:SM00184 SMART:SM00249 SMART:SM00317 SMART:SM00570
Pfam:PF00855 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 OMA:MEKDIHK EMBL:CU570721 Ensembl:ENSSSCT00000017228
Uniprot:F1RZJ3
Length = 1437
Score = 151 (58.2 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 25/46 (54%), Positives = 32/46 (69%)
Query: 11 HQDYCEVCQQGGEIILCDT--CPRAYHLCCLDPELDETPEGKWSCP 54
H+DYC C GGE+++CD CP+AYHL CL+ L + P GKW CP
Sbjct: 1320 HEDYCFQCGDGGELVMCDRKDCPKAYHLLCLN--LPQPPYGKWECP 1363
Score = 104 (41.7 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 16/39 (41%), Positives = 26/39 (66%)
Query: 18 CQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
C++GG ++ C++CP ++H CL E+ PEG W+C C
Sbjct: 917 CEKGGRLLCCESCPASFHPECLSIEM---PEGCWNCNDC 952
Score = 66 (28.3 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 16/51 (31%), Positives = 24/51 (47%)
Query: 76 EVLCAKCKSPGDQFLLCET--CNGSYHPHCLPDPIEGELPTSGWKCPKCSC 124
E C +C G + ++C+ C +YH CL P + P W+CP C
Sbjct: 1321 EDYCFQC-GDGGELVMCDRKDCPKAYHLLCLNLP---QPPYGKWECPWHQC 1367
Score = 34 (17.0 bits), Expect = 0.00052, Sum P(2) = 0.00051
Identities = 4/7 (57%), Positives = 6/7 (85%)
Query: 120 PKCSCPP 126
P+C+C P
Sbjct: 1096 PRCNCKP 1102
>UNIPROTKB|Q9BZ95 [details] [associations]
symbol:WHSC1L1 "Histone-lysine N-methyltransferase NSD3"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
[GO:0016049 "cell growth" evidence=NAS] [GO:0016571 "histone
methylation" evidence=IDA] [GO:0005634 "nucleus" evidence=IC]
[GO:0030154 "cell differentiation" evidence=NAS] [GO:0018024
"histone-lysine N-methyltransferase activity" evidence=IDA]
[GO:0034968 "histone lysine methylation" evidence=IDA]
InterPro:IPR001841 Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184
SMART:SM00249 SMART:SM00317 SMART:SM00570 Pfam:PF00855
GO:GO:0005634 GO:GO:0005694 GO:GO:0030154 GO:GO:0006355
EMBL:CH471080 GO:GO:0046872 GO:GO:0016049 GO:GO:0008270
GO:GO:0006351 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 eggNOG:COG2940 GO:GO:0018024 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 PDB:4GNE PDB:4GNF PDB:4GNG PDBsum:4GNE PDBsum:4GNF
PDBsum:4GNG PharmGKB:PA37370 HOVERGEN:HBG079979 EMBL:AF332468
EMBL:AF332469 EMBL:AJ295990 EMBL:AJ295991 EMBL:AJ295992
EMBL:AF255649 EMBL:AK000360 EMBL:AK022560 EMBL:AK127594
EMBL:BC012059 EMBL:BC062631 EMBL:BC101717 EMBL:BC107734
EMBL:BC113469 EMBL:BC115006 IPI:IPI00307783 IPI:IPI00444331
IPI:IPI00743157 IPI:IPI00792713 RefSeq:NP_060248.2
RefSeq:NP_075447.1 UniGene:Hs.608111 PDB:2DAQ PDB:4GND PDBsum:2DAQ
PDBsum:4GND ProteinModelPortal:Q9BZ95 SMR:Q9BZ95 IntAct:Q9BZ95
STRING:Q9BZ95 PhosphoSite:Q9BZ95 DMDM:74761342 PaxDb:Q9BZ95
PRIDE:Q9BZ95 DNASU:54904 Ensembl:ENST00000316985
Ensembl:ENST00000317025 Ensembl:ENST00000433384 GeneID:54904
KEGG:hsa:54904 UCSC:uc003xli.3 UCSC:uc003xlj.3 UCSC:uc010lwe.3
CTD:54904 GeneCards:GC08M038151 HGNC:HGNC:12767 HPA:CAB013721
HPA:HPA005659 HPA:HPA018893 MIM:607083 neXtProt:NX_Q9BZ95
InParanoid:Q9BZ95 KO:K11425 OMA:MEKDIHK ChiTaRS:WHSC1L1
EvolutionaryTrace:Q9BZ95 GenomeRNAi:54904 NextBio:57940
ArrayExpress:Q9BZ95 Bgee:Q9BZ95 Genevestigator:Q9BZ95
GermOnline:ENSG00000147548 Uniprot:Q9BZ95
Length = 1437
Score = 151 (58.2 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 25/46 (54%), Positives = 32/46 (69%)
Query: 11 HQDYCEVCQQGGEIILCDT--CPRAYHLCCLDPELDETPEGKWSCP 54
H+DYC C GGE+++CD CP+AYHL CL+ L + P GKW CP
Sbjct: 1320 HEDYCFQCGDGGELVMCDKKDCPKAYHLLCLN--LTQPPYGKWECP 1363
Score = 104 (41.7 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 16/39 (41%), Positives = 26/39 (66%)
Query: 18 CQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
C++GG ++ C++CP ++H CL E+ PEG W+C C
Sbjct: 917 CEKGGRLLCCESCPASFHPECLSIEM---PEGCWNCNDC 952
Score = 58 (25.5 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 15/51 (29%), Positives = 23/51 (45%)
Query: 76 EVLCAKCKSPGDQFLLCET--CNGSYHPHCLPDPIEGELPTSGWKCPKCSC 124
E C +C G + ++C+ C +YH CL + P W+CP C
Sbjct: 1321 EDYCFQC-GDGGELVMCDKKDCPKAYHLLCLNLT---QPPYGKWECPWHQC 1367
Score = 34 (17.0 bits), Expect = 0.00052, Sum P(2) = 0.00051
Identities = 4/7 (57%), Positives = 6/7 (85%)
Query: 120 PKCSCPP 126
P+C+C P
Sbjct: 1096 PRCNCKP 1102
>UNIPROTKB|E2QUJ0 [details] [associations]
symbol:WHSC1L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184
SMART:SM00249 SMART:SM00317 SMART:SM00570 Pfam:PF00855
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00700000104009
InterPro:IPR000313 PROSITE:PS50812 SMART:SM00293 OMA:MEKDIHK
EMBL:AAEX03010393 Ensembl:ENSCAFT00000009828 Uniprot:E2QUJ0
Length = 1438
Score = 151 (58.2 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 25/46 (54%), Positives = 32/46 (69%)
Query: 11 HQDYCEVCQQGGEIILCDT--CPRAYHLCCLDPELDETPEGKWSCP 54
H+DYC C GGE+++CD CP+AYHL CL+ L + P GKW CP
Sbjct: 1321 HEDYCFQCGDGGELVMCDKKDCPKAYHLLCLN--LTQPPYGKWECP 1364
Score = 107 (42.7 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 31/114 (27%), Positives = 47/114 (41%)
Query: 15 CEVCQQGGE-IILCD-TCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASPPAEEV 72
C++C+ G+ +I C+ C + +HL CL L P+GK+ C C +T P
Sbjct: 703 CQICESSGDSLIPCEGECCKHFHLECLG--LASVPDGKFICIEC------KTGQHP---- 750
Query: 73 KEKEVLCAKCKSPGDQFLLCET--CNGSYHPHCLPDPIEGELPTSGWKCPKCSC 124
C CK G C C YH C+ + G++CP+ C
Sbjct: 751 ------CFSCKVSGTDVKRCSVGACGKFYHEACVRKFPTAIFESKGFRCPQHCC 798
Score = 104 (41.7 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 16/39 (41%), Positives = 26/39 (66%)
Query: 18 CQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
C++GG ++ C++CP ++H CL E+ PEG W+C C
Sbjct: 917 CEKGGRLLCCESCPASFHPECLSIEM---PEGCWNCNDC 952
Score = 62 (26.9 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 17/58 (29%), Positives = 26/58 (44%)
Query: 69 AEEVKEKEVLCAKCKSPGDQFLLCET--CNGSYHPHCLPDPIEGELPTSGWKCPKCSC 124
AE + E C +C G + ++C+ C +YH CL + P W+CP C
Sbjct: 1315 AEPKQMHEDYCFQC-GDGGELVMCDKKDCPKAYHLLCLNLT---QPPYGKWECPWHQC 1368
Score = 34 (17.0 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 4/7 (57%), Positives = 6/7 (85%)
Query: 120 PKCSCPP 126
P+C+C P
Sbjct: 1096 PRCNCKP 1102
>UNIPROTKB|D4A3R4 [details] [associations]
symbol:Whsc1l1 "Protein Whsc1l1" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] InterPro:IPR001841
Pfam:PF00856 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 PROSITE:PS50016
PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00570 Pfam:PF00855 RGD:1308980 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 GO:GO:0034968 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 IPI:IPI00393216 Ensembl:ENSRNOT00000031675
ArrayExpress:D4A3R4 Uniprot:D4A3R4
Length = 1439
Score = 151 (58.2 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 25/46 (54%), Positives = 32/46 (69%)
Query: 11 HQDYCEVCQQGGEIILCDT--CPRAYHLCCLDPELDETPEGKWSCP 54
H+DYC C GGE+++CD CP+AYHL CL+ L + P GKW CP
Sbjct: 1322 HEDYCFQCGDGGELVMCDKKDCPKAYHLLCLN--LTQPPYGKWECP 1365
Score = 111 (44.1 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 32/114 (28%), Positives = 47/114 (41%)
Query: 15 CEVCQQGGE-IILCD-TCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASPPAEEV 72
C+VC+ G+ ++ C+ C R +H CL L PEG+++C C ET P
Sbjct: 704 CQVCENTGDSLVACEGECCRHFHPECLG--LAAVPEGRFTCEEC------ETGQHP---- 751
Query: 73 KEKEVLCAKCKSPGDQFLLCET--CNGSYHPHCLPDPIEGELPTSGWKCPKCSC 124
C CK G C C YH C+ + G++CP+ C
Sbjct: 752 ------CFSCKVSGKDVKRCSVSVCGKFYHEACVRKFPTAIFESKGFRCPQHCC 799
Score = 101 (40.6 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 15/39 (38%), Positives = 26/39 (66%)
Query: 18 CQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
C++GG ++ C++CP ++H CL ++ PEG W+C C
Sbjct: 917 CEKGGRLLCCESCPASFHPECLSIDM---PEGCWNCNDC 952
Score = 61 (26.5 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 17/58 (29%), Positives = 26/58 (44%)
Query: 69 AEEVKEKEVLCAKCKSPGDQFLLCET--CNGSYHPHCLPDPIEGELPTSGWKCPKCSC 124
AE + E C +C G + ++C+ C +YH CL + P W+CP C
Sbjct: 1316 AEAKQIHEDYCFQC-GDGGELVMCDKKDCPKAYHLLCLNLT---QPPYGKWECPWHQC 1369
Score = 34 (17.0 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 4/7 (57%), Positives = 6/7 (85%)
Query: 120 PKCSCPP 126
P+C+C P
Sbjct: 1099 PRCNCKP 1105
>RGD|1308980 [details] [associations]
symbol:Whsc1l1 "Wolf-Hirschhorn syndrome candidate 1-like 1"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016571 "histone methylation" evidence=ISO]
[GO:0018024 "histone-lysine N-methyltransferase activity"
evidence=IEA;ISO] [GO:0034968 "histone lysine methylation"
evidence=ISO] InterPro:IPR001841 Pfam:PF00856 InterPro:IPR001214
InterPro:IPR001965 InterPro:IPR006560 InterPro:IPR019787
PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184
SMART:SM00249 SMART:SM00317 SMART:SM00570 Pfam:PF00855 RGD:1308980
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 IPI:IPI00204321 Ensembl:ENSRNOT00000021053
UCSC:RGD:1308980 ArrayExpress:D4AC06 Uniprot:D4AC06
Length = 1443
Score = 151 (58.2 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 25/46 (54%), Positives = 32/46 (69%)
Query: 11 HQDYCEVCQQGGEIILCDT--CPRAYHLCCLDPELDETPEGKWSCP 54
H+DYC C GGE+++CD CP+AYHL CL+ L + P GKW CP
Sbjct: 1326 HEDYCFQCGDGGELVMCDKKDCPKAYHLLCLN--LTQPPYGKWECP 1369
Score = 111 (44.1 bits), Expect = 6.9e-06, Sum P(2) = 6.9e-06
Identities = 32/114 (28%), Positives = 47/114 (41%)
Query: 15 CEVCQQGGE-IILCD-TCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASPPAEEV 72
C+VC+ G+ ++ C+ C R +H CL L PEG+++C C ET P
Sbjct: 711 CQVCENTGDSLVACEGECCRHFHPECLG--LAAVPEGRFTCEEC------ETGQHP---- 758
Query: 73 KEKEVLCAKCKSPGDQFLLCET--CNGSYHPHCLPDPIEGELPTSGWKCPKCSC 124
C CK G C C YH C+ + G++CP+ C
Sbjct: 759 ------CFSCKVSGKDVKRCSVSVCGKFYHEACVRKFPTAIFESKGFRCPQHCC 806
Score = 101 (40.6 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 15/39 (38%), Positives = 26/39 (66%)
Query: 18 CQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
C++GG ++ C++CP ++H CL ++ PEG W+C C
Sbjct: 924 CEKGGRLLCCESCPASFHPECLSIDM---PEGCWNCNDC 959
Score = 61 (26.5 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
Identities = 17/58 (29%), Positives = 26/58 (44%)
Query: 69 AEEVKEKEVLCAKCKSPGDQFLLCET--CNGSYHPHCLPDPIEGELPTSGWKCPKCSC 124
AE + E C +C G + ++C+ C +YH CL + P W+CP C
Sbjct: 1320 AEAKQIHEDYCFQC-GDGGELVMCDKKDCPKAYHLLCLNLT---QPPYGKWECPWHQC 1373
Score = 34 (17.0 bits), Expect = 6.9e-06, Sum P(2) = 6.9e-06
Identities = 4/7 (57%), Positives = 6/7 (85%)
Query: 120 PKCSCPP 126
P+C+C P
Sbjct: 1103 PRCNCKP 1109
>UNIPROTKB|E1BNH7 [details] [associations]
symbol:WHSC1L1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0018024 "histone-lysine N-methyltransferase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR001214 InterPro:IPR001965 InterPro:IPR006560
InterPro:IPR019787 PROSITE:PS50016 PROSITE:PS50280 PROSITE:PS51215
SMART:SM00184 SMART:SM00249 SMART:SM00317 SMART:SM00570
Pfam:PF00855 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0018024
InterPro:IPR003616 SMART:SM00508 PROSITE:PS50868
GeneTree:ENSGT00700000104009 InterPro:IPR000313 PROSITE:PS50812
SMART:SM00293 OMA:MEKDIHK EMBL:DAAA02060851 EMBL:DAAA02060847
EMBL:DAAA02060848 EMBL:DAAA02060849 EMBL:DAAA02060850
IPI:IPI00924282 Ensembl:ENSBTAT00000061245 Uniprot:E1BNH7
Length = 1440
Score = 139 (54.0 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 23/46 (50%), Positives = 31/46 (67%)
Query: 11 HQDYCEVCQQGGEIILCDT--CPRAYHLCCLDPELDETPEGKWSCP 54
H+D+C C GGE+++CD C +AYHL CL+ L + P GKW CP
Sbjct: 1323 HEDFCFQCGDGGELVMCDRKDCSKAYHLLCLN--LPQPPYGKWECP 1366
Score = 109 (43.4 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 31/114 (27%), Positives = 47/114 (41%)
Query: 15 CEVCQQGGE-IILCD-TCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASPPAEEV 72
C++C+ G+ +I C+ C + +HL CL L P+GK+ C C +T P
Sbjct: 705 CQICESSGDSLIPCEGECCKHFHLECLG--LSSPPDGKFVCVEC------KTGQHP---- 752
Query: 73 KEKEVLCAKCKSPGDQFLLCET--CNGSYHPHCLPDPIEGELPTSGWKCPKCSC 124
C CK G C C YH C+ + G++CP+ C
Sbjct: 753 ------CFSCKVSGADVKRCSVSACGKFYHEACVRKFPTAVFESKGFRCPQHCC 800
Score = 107 (42.7 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 17/39 (43%), Positives = 26/39 (66%)
Query: 18 CQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
C++GG ++ C++CP ++H CL E TPEG W+C C
Sbjct: 919 CEKGGRLLCCESCPASFHPECLSIE---TPEGCWNCNDC 954
Score = 71 (30.1 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 18/65 (27%), Positives = 29/65 (44%)
Query: 62 PETASPPAEEVKEKEVLCAKCKSPGDQFLLCET--CNGSYHPHCLPDPIEGELPTSGWKC 119
P+ E + E C +C G + ++C+ C+ +YH CL P + P W+C
Sbjct: 1310 PKRRKIKTEPKQLHEDFCFQC-GDGGELVMCDRKDCSKAYHLLCLNLP---QPPYGKWEC 1365
Query: 120 PKCSC 124
P C
Sbjct: 1366 PWHQC 1370
Score = 34 (17.0 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 4/7 (57%), Positives = 6/7 (85%)
Query: 120 PKCSCPP 126
P+C+C P
Sbjct: 1098 PRCNCKP 1104
>ZFIN|ZDB-GENE-091118-99 [details] [associations]
symbol:si:ch211-244o18.1 "si:ch211-244o18.1"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 ZFIN:ZDB-GENE-091118-99 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
GeneTree:ENSGT00690000101661 EMBL:BX294167 IPI:IPI00993170
Ensembl:ENSDART00000133525 Uniprot:F1R5P1
Length = 589
Score = 146 (56.5 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 32/89 (35%), Positives = 38/89 (42%)
Query: 15 CEVCQQG---GEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASPPAE- 70
CE C Q G ++LCD C +YH CLDP L P+G W C CV SP
Sbjct: 19 CEACGQASDPGRLLLCDDCDISYHTYCLDPPLQNVPKGSWKCKWCVLCTHCGATSPGLRC 78
Query: 71 EVKEKEVLCAKCKSPGDQFLLCETCNGSY 99
E + C C S +C C SY
Sbjct: 79 EWQNNYTQCGPCAS----LTVCPVCTRSY 103
Score = 109 (43.4 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 18/44 (40%), Positives = 26/44 (59%)
Query: 79 CAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC 122
C + PG + LLC+ C+ SYH +CL P++ +P WKC C
Sbjct: 22 CGQASDPG-RLLLCDDCDISYHTYCLDPPLQN-VPKGSWKCKWC 63
>UNIPROTKB|F1NBP6 [details] [associations]
symbol:F1NBP6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0010369 "chromocenter"
evidence=IEA] [GO:0016235 "aggresome" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000315 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR003649 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF00643 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50119 SMART:SM00184
SMART:SM00249 SMART:SM00297 SMART:SM00336 SMART:SM00502
Prosite:PS00518 GO:GO:0005634 GO:GO:0045892 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0016235 InterPro:IPR017907 Gene3D:1.20.920.10
SUPFAM:SSF47370 GO:GO:0010369 GeneTree:ENSGT00530000062982
OMA:HMENERA EMBL:AADN02030565 IPI:IPI00595769
Ensembl:ENSGALT00000009581 Uniprot:F1NBP6
Length = 1025
Score = 149 (57.5 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 24/54 (44%), Positives = 33/54 (61%)
Query: 10 EHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPE 63
E++D+C VC GGE++ CD CP+ +HL C P L P G+W C C + PE
Sbjct: 781 ENEDFCAVCLNGGELLCCDHCPKVFHLSCHVPALLSFPVGEWVCTLCRNPMKPE 834
>ZFIN|ZDB-GENE-060810-94 [details] [associations]
symbol:kdm5c "lysine (K)-specific demethylase 5C"
species:7955 "Danio rerio" [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
ZFIN:ZDB-GENE-060810-94 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0043524 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 GeneTree:ENSGT00530000063118 KO:K11446
HOGENOM:HOG000290719 CTD:8242 OMA:ISWQGRA HOVERGEN:HBG068574
EMBL:BX537348 IPI:IPI00611775 RefSeq:NP_001116706.1
UniGene:Dr.75967 SMR:B0S6L0 Ensembl:ENSDART00000098657
Ensembl:ENSDART00000127053 GeneID:553406 KEGG:dre:553406
NextBio:20880164 Uniprot:B0S6L0
Length = 1578
Score = 129 (50.5 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 15 CEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSD 59
C +C +G E ++LCD C YH CL P L + P+G W CP+CV++
Sbjct: 361 CRMCGRGDEDEKLMLCDGCDDNYHTFCLIPPLTDPPKGNWRCPKCVAE 408
Score = 49 (22.3 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 26/102 (25%), Positives = 37/102 (36%)
Query: 58 SDGPPETASPPAEEVKEKEVLCAKCKSPGDQFL-LCETCNGSYHPHCLPDP-----IEGE 111
SD P + + + +C C P L C C +H C+ P +
Sbjct: 1234 SDSPVLQNGGSSHSLTSSQTVCI-CGGPPRPLLHRCHLCKDWFHGGCVSFPPLLATSDTH 1292
Query: 112 L--PTSGWK------CPKCSCPPLPGKLEDMASLL----RLP 141
L P W CP+C P +LE + +LL RLP
Sbjct: 1293 LTKPLCWWDWNTRFLCPRCQRSRRP-RLETILALLVALQRLP 1333
Score = 34 (17.0 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 11/37 (29%), Positives = 14/37 (37%)
Query: 60 GPPETASPPAEEVKEKEVLCAKCKSPGD-QFLLCETC 95
G E E + + E C KCK+ L C C
Sbjct: 722 GIKEAEREAFELLPDDERQCDKCKTTCFLSALACSNC 758
>UNIPROTKB|F1P5H8 [details] [associations]
symbol:TRIM33 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0017015 "regulation of
transforming growth factor beta receptor signaling pathway"
evidence=IEA] [GO:0030514 "negative regulation of BMP signaling
pathway" evidence=IEA] [GO:0070410 "co-SMAD binding" evidence=IEA]
[GO:0070412 "R-SMAD binding" evidence=IEA] InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119
SMART:SM00249 SMART:SM00297 SMART:SM00336 SMART:SM00502
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.20.920.10
SUPFAM:SSF47370 GO:GO:0030514 GO:GO:0017015
GeneTree:ENSGT00530000062982 OMA:PIRSLMH EMBL:AADN02045019
IPI:IPI00589805 Ensembl:ENSGALT00000003070 Uniprot:F1P5H8
Length = 947
Score = 148 (57.2 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 34/105 (32%), Positives = 48/105 (45%)
Query: 11 HQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASPPAE 70
++D+C VCQ GG+++ C+ CP+ +HL C P L P G W C C PE
Sbjct: 723 NEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDLSKPEVEYDCDN 782
Query: 71 EVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTS 115
K+ A+ SP DQ CE + H L + +P S
Sbjct: 783 LQHSKKGKTAQGLSPVDQ-RKCERLLLYLYCHELSIEFQEPVPAS 826
>UNIPROTKB|E9PTL0 [details] [associations]
symbol:Zmynd8 "Protein Zmynd8" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR002893
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01753
PRINTS:PR00503 PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50865 SMART:SM00249 SMART:SM00297 Pfam:PF00855
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 InterPro:IPR021931 Pfam:PF12064
IPI:IPI00769023 Ensembl:ENSRNOT00000055139 RGD:1309544
ArrayExpress:E9PTL0 Uniprot:E9PTL0
Length = 1073
Score = 136 (52.9 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 23/55 (41%), Positives = 30/55 (54%)
Query: 2 SHIQDLQTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
S +D + YC VC + G+++ C+ CPR YH CL L PEG W CP C
Sbjct: 53 SSSKDQDGRNDFYCWVCHREGQVLCCELCPRVYHAKCL--RLTSEPEGDWFCPEC 105
Score = 38 (18.4 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 70 EEVKEKEVLCAKCKSPGDQFLLCETCNGSY 99
+E K+K+ CA CK F C N SY
Sbjct: 954 DETKKKQ-WCANCKKEAI-FYCC--WNTSY 979
Score = 34 (17.0 bits), Expect = 9.0e-09, Sum P(2) = 9.0e-09
Identities = 7/12 (58%), Positives = 7/12 (58%)
Query: 117 WKCPKCSCP-PL 127
W C CS P PL
Sbjct: 244 WFCEPCSNPHPL 255
>UNIPROTKB|K7EQP5 [details] [associations]
symbol:PHF12 "PHD finger protein 12" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 EMBL:AC024267 HGNC:HGNC:20816
Ensembl:ENST00000583747 Uniprot:K7EQP5
Length = 117
Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 9 TEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDET--PEGKWSC 53
T H D C+ C++GG+++ CD CP A+HL C +P L E P G+W C
Sbjct: 72 TNH-DSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMC 117
Score = 85 (35.0 bits), Expect = 0.00073, P = 0.00072
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 79 CAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGE-LPTSGWKC 119
C CK GD L C+ C ++H C P+ E LP W C
Sbjct: 77 CDSCKEGGD-LLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMC 117
>UNIPROTKB|Q5TH12 [details] [associations]
symbol:ZMYND8 "Protein kinase C-binding protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 GO:GO:0046872 GO:GO:0008270
GO:GO:0016301 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370 EMBL:AL049540
EMBL:AL031666 UniGene:Hs.446240 UniGene:Hs.658553 UniGene:Hs.668465
HGNC:HGNC:9397 EMBL:AL390212 IPI:IPI00872983 SMR:Q5TH12
STRING:Q5TH12 Ensembl:ENST00000435836 HOVERGEN:HBG105145
Uniprot:Q5TH12
Length = 175
Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 21/43 (48%), Positives = 26/43 (60%)
Query: 14 YCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
YC VC + G+++ C+ CPR YH CL L PEG W CP C
Sbjct: 65 YCWVCHREGQVLCCELCPRVYHAKCL--RLTSEPEGDWFCPEC 105
>UNIPROTKB|H0YMU7 [details] [associations]
symbol:MLL3 "Histone-lysine N-methyltransferase MLL3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016571 "histone methylation" evidence=IEA] InterPro:IPR001841
InterPro:IPR000637 InterPro:IPR001594 InterPro:IPR001965
InterPro:IPR017956 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS00354
PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS50216 SMART:SM00184
SMART:SM00249 SMART:SM00384 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0016571 EMBL:AC005631
EMBL:AC006017 EMBL:AC104692 HGNC:HGNC:13726 ChiTaRS:MLL3
EMBL:AC006474 ProteinModelPortal:H0YMU7 SMR:H0YMU7
Ensembl:ENST00000558084 Bgee:H0YMU7 Uniprot:H0YMU7
Length = 826
Score = 146 (56.5 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 32/114 (28%), Positives = 47/114 (41%)
Query: 15 CEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASPPAEE 71
C+ C+Q GE +++CDTC + YH CL P + P W C C E + + +
Sbjct: 391 CQNCKQSGEDSKMLVCDTCDKGYHTFCLQPVMKSVPTNGWKCKNCRIC--IECGTRSSSQ 448
Query: 72 VKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKCSCP 125
++C C D LC C YHP D + + W +C P
Sbjct: 449 WHHNCLICDNCYQQQDN--LCPFCGKCYHPELQKDMLHCNM-CKRWVHLECDKP 499
Score = 131 (51.2 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 42/132 (31%), Positives = 52/132 (39%)
Query: 15 CEVCQQGGEIILC--DTCPRAYHLCCLDPE--LDETPEGKWSCPRCVSDGPPETASPPAE 70
C C+ G I C + C + YH C + CP + P E
Sbjct: 285 CAFCKHLGATIKCCEEKCTQMYHYPCAAGAGTFQDFSHIFLLCPEHIDQAP--------E 336
Query: 71 EVKEKEVLCAKCKSPGD---QFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKCS-CPP 126
KE + CA C SPGD QF C TC YH CL D L +GW+CP+C C
Sbjct: 337 RSKE-DANCAVCDSPGDLLDQFF-CTTCGQHYHGMCL-DIAVTPLKRAGWQCPECKVCQN 393
Query: 127 LPGKLEDMASLL 138
ED L+
Sbjct: 394 CKQSGEDSKMLV 405
>UNIPROTKB|B0QZ44 [details] [associations]
symbol:KDM5C "Smcy homolog, X-linked (Mouse), isoform
CRA_a" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016706 "oxidoreductase activity, acting on paired donors, with
incorporation or reduction of molecular oxygen, 2-oxoglutarate as
one donor, and incorporation of one atom each of oxygen into both
donors" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.10.150.60
SUPFAM:SSF46774 InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375
SMART:SM00545 EMBL:CH471154 EMBL:AL139396 HOGENOM:HOG000290719
UniGene:Hs.631768 HGNC:HGNC:11114 ChiTaRS:KDM5C IPI:IPI00879547
SMR:B0QZ44 Ensembl:ENST00000404049 UCSC:uc004dsa.3
HOVERGEN:HBG068574 Uniprot:B0QZ44
Length = 1559
Score = 134 (52.2 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 25/55 (45%), Positives = 32/55 (58%)
Query: 15 CEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVS---DGPPE 63
C +C +G E ++LCD C YH+ CL P L E P+G W CP+CV PPE
Sbjct: 326 CRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWRCPKCVMAECKRPPE 380
Score = 110 (43.8 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 78 LCAKCK--SPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC 122
+C C D+ LLC+ C+ +YH CL P+ E+P W+CPKC
Sbjct: 325 VCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLP-EIPKGVWRCPKC 370
Score = 42 (19.8 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 19/64 (29%), Positives = 29/64 (45%)
Query: 64 TASPPAEEVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLP-DPIEGELPTSGWKCPKC 122
++ P AEEV+E+E L + G + T + S + +P EG TSG P
Sbjct: 1483 SSGPEAEEVQEEEELEEETGGEGPPAPIPTTGSPSTQENQNGLEPAEGT--TSGPSAPFS 1540
Query: 123 SCPP 126
+ P
Sbjct: 1541 TLTP 1544
Score = 36 (17.7 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 7/11 (63%), Positives = 7/11 (63%)
Query: 107 PIEGELPTSGW 117
P E E TSGW
Sbjct: 463 PEEEEYATSGW 473
>UNIPROTKB|P41229 [details] [associations]
symbol:KDM5C "Lysine-specific demethylase 5C" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0032453 "histone demethylase activity (H3-K4
specific)" evidence=IDA] [GO:0034720 "histone H3-K4 demethylation"
evidence=IDA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006351 GO:GO:0016706 GO:GO:0016702
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.10.150.60 SUPFAM:SSF46774 InterPro:IPR003349
PROSITE:PS51183 Pfam:PF02375 SMART:SM00545 EMBL:AL139396
eggNOG:NOG327026 GO:GO:0032453 KO:K11446 HOGENOM:HOG000290719
CTD:8242 OrthoDB:EOG4894KP EMBL:L25270 EMBL:AK304732 EMBL:BC054499
EMBL:Z29650 IPI:IPI00013185 IPI:IPI00219412 IPI:IPI00640875
IPI:IPI01012687 PIR:I54361 RefSeq:NP_001140174.1 RefSeq:NP_004178.2
UniGene:Hs.631768 PDB:2JRZ PDBsum:2JRZ ProteinModelPortal:P41229
SMR:P41229 DIP:DIP-39663N IntAct:P41229 STRING:P41229
PhosphoSite:P41229 DMDM:117949812 PaxDb:P41229 PRIDE:P41229
DNASU:8242 Ensembl:ENST00000375379 Ensembl:ENST00000375383
Ensembl:ENST00000375401 Ensembl:ENST00000452825 GeneID:8242
KEGG:hsa:8242 UCSC:uc004drz.3 GeneCards:GC0XM053237 HGNC:HGNC:11114
MIM:300534 MIM:314690 neXtProt:NX_P41229 Orphanet:85279
PharmGKB:PA35964 InParanoid:P41229 OMA:ISWQGRA PhylomeDB:P41229
ChiTaRS:KDM5C EvolutionaryTrace:P41229 GenomeRNAi:8242
NextBio:31002 ArrayExpress:P41229 Bgee:P41229 CleanEx:HS_JARID1C
Genevestigator:P41229 GermOnline:ENSG00000126012 Uniprot:P41229
Length = 1560
Score = 134 (52.2 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 25/55 (45%), Positives = 32/55 (58%)
Query: 15 CEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVS---DGPPE 63
C +C +G E ++LCD C YH+ CL P L E P+G W CP+CV PPE
Sbjct: 327 CRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWRCPKCVMAECKRPPE 381
Score = 110 (43.8 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 78 LCAKCK--SPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC 122
+C C D+ LLC+ C+ +YH CL P+ E+P W+CPKC
Sbjct: 326 VCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLP-EIPKGVWRCPKC 371
Score = 42 (19.8 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 19/64 (29%), Positives = 29/64 (45%)
Query: 64 TASPPAEEVKEKEVLCAKCKSPGDQFLLCETCNGSYHPHCLP-DPIEGELPTSGWKCPKC 122
++ P AEEV+E+E L + G + T + S + +P EG TSG P
Sbjct: 1484 SSGPEAEEVQEEEELEEETGGEGPPAPIPTTGSPSTQENQNGLEPAEGT--TSGPSAPFS 1541
Query: 123 SCPP 126
+ P
Sbjct: 1542 TLTP 1545
Score = 37 (18.1 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 6/16 (37%), Positives = 10/16 (62%)
Query: 16 EVCQQGGEIILCDTCP 31
E+ Q G ++ C+T P
Sbjct: 165 EMYQSGANLVQCNTRP 180
Score = 36 (17.7 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 7/11 (63%), Positives = 7/11 (63%)
Query: 107 PIEGELPTSGW 117
P E E TSGW
Sbjct: 464 PEEEEYATSGW 474
>UNIPROTKB|B7ZM62 [details] [associations]
symbol:ZMYND8 "ZMYND8 protein" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR002893 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01753 PRINTS:PR00503
PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50865
SMART:SM00249 SMART:SM00297 Pfam:PF00855 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 EMBL:AL049540 EMBL:AL031666
UniGene:Hs.446240 UniGene:Hs.658553 UniGene:Hs.668465
HGNC:HGNC:9397 HOVERGEN:HBG031823 InterPro:IPR021931 Pfam:PF12064
EMBL:AL390212 EMBL:BC136608 EMBL:BC144289 IPI:IPI00922821
SMR:B7ZM62 STRING:B7ZM62 Ensembl:ENST00000458360 UCSC:uc010zxz.1
HOGENOM:HOG000230951 Uniprot:B7ZM62
Length = 1054
Score = 134 (52.2 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
Identities = 21/43 (48%), Positives = 26/43 (60%)
Query: 14 YCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
YC VC + G+++ C+ CPR YH CL L PEG W CP C
Sbjct: 85 YCWVCHREGQVLCCELCPRVYHAKCL--RLTSEPEGDWFCPEC 125
Score = 38 (18.4 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 70 EEVKEKEVLCAKCKSPGDQFLLCETCNGSY 99
+E K+K+ CA CK F C N SY
Sbjct: 888 DETKKKQ-WCANCKKEAI-FYCC--WNTSY 913
Score = 36 (17.7 bits), Expect = 8.7e-09, Sum P(2) = 8.7e-09
Identities = 6/16 (37%), Positives = 11/16 (68%)
Query: 62 PETASPPAEEVKEKEV 77
P+ SP + V++KE+
Sbjct: 728 PKEPSPKQDAVQQKEI 743
Score = 34 (17.0 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 7/12 (58%), Positives = 7/12 (58%)
Query: 117 WKCPKCSCP-PL 127
W C CS P PL
Sbjct: 264 WFCEPCSNPHPL 275
>UNIPROTKB|I3LCE6 [details] [associations]
symbol:BAZ1B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071884 "vitamin D receptor activator activity"
evidence=IEA] [GO:0071778 "WINAC complex" evidence=IEA] [GO:0070577
"histone acetyl-lysine binding" evidence=IEA] [GO:0048096
"chromatin-mediated maintenance of transcription" evidence=IEA]
[GO:0043596 "nuclear replication fork" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0042809
"vitamin D receptor binding" evidence=IEA] [GO:0035173 "histone
kinase activity" evidence=IEA] [GO:0034725 "DNA
replication-dependent nucleosome disassembly" evidence=IEA]
[GO:0032947 "protein complex scaffold" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=IEA] [GO:0005721 "centromeric
heterochromatin" evidence=IEA] [GO:0004713 "protein tyrosine kinase
activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003007 "heart morphogenesis" evidence=IEA]
[GO:0000793 "condensed chromosome" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50089
SMART:SM00184 SMART:SM00249 SMART:SM00297 GO:GO:0046872
GO:GO:0003007 GO:GO:0008270 GO:GO:0003682 GO:GO:0004713
GO:GO:0043596 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006302 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005721 GO:GO:0000793 GO:GO:0048096
GO:GO:0043044 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR018500 InterPro:IPR018501
InterPro:IPR013136 Pfam:PF10537 SMART:SM00571 PROSITE:PS50827
PROSITE:PS51136 GeneTree:ENSGT00660000095335 OMA:CNKAFHL
GO:GO:0071778 GO:GO:0035173 GO:GO:0071884 GO:GO:0034725
EMBL:FP312931 Ensembl:ENSSSCT00000030732 Uniprot:I3LCE6
Length = 1483
Score = 141 (54.7 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 25/54 (46%), Positives = 35/54 (64%)
Query: 6 DLQTEHQDYCEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
D+ E+ C+VC++ GE +ILCD C +A+HL CL P L P+G+W CP C
Sbjct: 1179 DMSAENAR-CKVCRKKGEDDKLILCDECNKAFHLFCLRPALYAVPDGEWQCPAC 1231
Score = 34 (17.0 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
Identities = 8/34 (23%), Positives = 15/34 (44%)
Query: 67 PPAEEVKEKEVLCAKCKSPGDQFLLCETCNGSYH 100
PP ++ + E++ +S Q L + C H
Sbjct: 1320 PPVDDAEVDELVLQTKRSSRRQSLELQKCEEILH 1353
>UNIPROTKB|H7C4X9 [details] [associations]
symbol:ZMYND8 "Protein kinase C-binding protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR002893 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01753 PRINTS:PR00503 PROSITE:PS01360 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50865 SMART:SM00249 SMART:SM00297
Pfam:PF00855 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.20.920.10
SUPFAM:SSF47370 InterPro:IPR000313 PROSITE:PS50812 EMBL:AL049540
EMBL:AL031666 HGNC:HGNC:9397 InterPro:IPR021931 Pfam:PF12064
EMBL:AL390212 ProteinModelPortal:H7C4X9 PRIDE:H7C4X9
Ensembl:ENST00000467200 Uniprot:H7C4X9
Length = 1096
Score = 134 (52.2 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 21/43 (48%), Positives = 26/43 (60%)
Query: 14 YCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
YC VC + G+++ C+ CPR YH CL L PEG W CP C
Sbjct: 17 YCWVCHREGQVLCCELCPRVYHAKCL--RLTSEPEGDWFCPEC 57
Score = 38 (18.4 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 70 EEVKEKEVLCAKCKSPGDQFLLCETCNGSY 99
+E K+K+ CA CK F C N SY
Sbjct: 902 DETKKKQ-WCANCKKEAI-FYCC--WNTSY 927
Score = 34 (17.0 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 7/12 (58%), Positives = 7/12 (58%)
Query: 117 WKCPKCSCP-PL 127
W C CS P PL
Sbjct: 196 WFCEPCSNPHPL 207
>UNIPROTKB|H0YEK2 [details] [associations]
symbol:PHF21A "PHD finger protein 21A" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 EMBL:AC068385
HGNC:HGNC:24156 EMBL:AC024475 EMBL:AC129913 Ensembl:ENST00000530587
Bgee:H0YEK2 Uniprot:H0YEK2
Length = 116
Score = 133 (51.9 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 20/33 (60%), Positives = 24/33 (72%)
Query: 24 IILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
+++CDTC R YHL CLDP L P+G W CPRC
Sbjct: 1 LLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRC 33
Score = 90 (36.7 bits), Expect = 0.00021, P = 0.00021
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 90 LLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC 122
L+C+TC+ YH CL P++ +P W CP+C
Sbjct: 2 LMCDTCSRVYHLDCLDPPLK-TIPKGMWICPRC 33
>UNIPROTKB|Q2HXV1 [details] [associations]
symbol:ZMYND8 "RACK7 isoform l" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR002893 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01753 PROSITE:PS01360
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50865 SMART:SM00249
SMART:SM00297 Pfam:PF00855 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.20.920.10 SUPFAM:SSF47370 InterPro:IPR000313
PROSITE:PS50812 EMBL:AL049540 EMBL:AL031666 UniGene:Hs.446240
UniGene:Hs.658553 UniGene:Hs.668465 HGNC:HGNC:9397
HOVERGEN:HBG031823 InterPro:IPR021931 Pfam:PF12064 EMBL:AL390212
EMBL:DQ368680 IPI:IPI01009867 SMR:Q2HXV1 Ensembl:ENST00000540497
UCSC:uc002xsv.1 Uniprot:Q2HXV1
Length = 1134
Score = 134 (52.2 bits), Expect = 6.4e-09, Sum P(2) = 6.4e-09
Identities = 21/43 (48%), Positives = 26/43 (60%)
Query: 14 YCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
YC VC + G+++ C+ CPR YH CL L PEG W CP C
Sbjct: 85 YCWVCHREGQVLCCELCPRVYHAKCL--RLTSEPEGDWFCPEC 125
Score = 38 (18.4 bits), Expect = 6.4e-09, Sum P(2) = 6.4e-09
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 70 EEVKEKEVLCAKCKSPGDQFLLCETCNGSY 99
+E K+K+ CA CK F C N SY
Sbjct: 968 DETKKKQ-WCANCKKEAI-FYCC--WNTSY 993
Score = 34 (17.0 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 7/12 (58%), Positives = 7/12 (58%)
Query: 117 WKCPKCSCP-PL 127
W C CS P PL
Sbjct: 264 WFCEPCSNPHPL 275
>UNIPROTKB|Q2HXV3 [details] [associations]
symbol:ZMYND8 "Protein kinase C-binding protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR002893 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01753 PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50865 SMART:SM00249 SMART:SM00297 Pfam:PF00855
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 EMBL:AL049540 EMBL:AL031666
UniGene:Hs.446240 UniGene:Hs.658553 UniGene:Hs.668465
HGNC:HGNC:9397 HOVERGEN:HBG031823 InterPro:IPR021931 Pfam:PF12064
EMBL:AL390212 EMBL:DQ368678 IPI:IPI00941004 SMR:Q2HXV3
STRING:Q2HXV3 Ensembl:ENST00000372023 UCSC:uc010ghr.1
Uniprot:Q2HXV3
Length = 1136
Score = 134 (52.2 bits), Expect = 6.4e-09, Sum P(2) = 6.4e-09
Identities = 21/43 (48%), Positives = 26/43 (60%)
Query: 14 YCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
YC VC + G+++ C+ CPR YH CL L PEG W CP C
Sbjct: 85 YCWVCHREGQVLCCELCPRVYHAKCL--RLTSEPEGDWFCPEC 125
Score = 38 (18.4 bits), Expect = 6.4e-09, Sum P(2) = 6.4e-09
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 70 EEVKEKEVLCAKCKSPGDQFLLCETCNGSY 99
+E K+K+ CA CK F C N SY
Sbjct: 942 DETKKKQ-WCANCKKEAI-FYCC--WNTSY 967
Score = 34 (17.0 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 7/12 (58%), Positives = 7/12 (58%)
Query: 117 WKCPKCSCP-PL 127
W C CS P PL
Sbjct: 264 WFCEPCSNPHPL 275
>UNIPROTKB|J9P712 [details] [associations]
symbol:PHRF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016 PROSITE:PS50089
SMART:SM00184 SMART:SM00249 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR017907
GeneTree:ENSGT00530000063661 EMBL:AAEX03011329
Ensembl:ENSCAFT00000046673 Uniprot:J9P712
Length = 1626
Score = 148 (57.2 bits), Expect = 6.5e-09, P = 6.5e-09
Identities = 29/73 (39%), Positives = 38/73 (52%)
Query: 8 QTEHQDYCEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPET 64
+ E +CEVC + ++LCD C YH+ CLDP L E P +W CP C + G
Sbjct: 175 EEEDPTFCEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQEVPVDEWFCPECAAPGA--A 232
Query: 65 ASPPAEEVKEKEV 77
A A V E+EV
Sbjct: 233 ADADAGPVSEEEV 245
Score = 128 (50.1 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 26/67 (38%), Positives = 36/67 (53%)
Query: 61 PPETASPPAEEVKEKEVLCAKC-KSPG-DQFLLCETCNGSYHPHCLPDPIEGELPTSGWK 118
P E A EE +E C C +S D+ LLC+ C+ YH CL P++ E+P W
Sbjct: 165 PVENARA-GEEEEEDPTFCEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQ-EVPVDEWF 222
Query: 119 CPKCSCP 125
CP+C+ P
Sbjct: 223 CPECAAP 229
>UNIPROTKB|E2R8R1 [details] [associations]
symbol:ZMYND8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR002893
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01753
PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50865
SMART:SM00249 SMART:SM00297 Pfam:PF00855 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 InterPro:IPR021931 Pfam:PF12064
GeneTree:ENSGT00530000063428 EMBL:AAEX03013984 EMBL:AAEX03013985
Ensembl:ENSCAFT00000017108 OMA:PTINKGR Uniprot:E2R8R1
Length = 1143
Score = 134 (52.2 bits), Expect = 6.5e-09, Sum P(2) = 6.5e-09
Identities = 21/43 (48%), Positives = 26/43 (60%)
Query: 14 YCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
YC VC + G+++ C+ CPR YH CL L PEG W CP C
Sbjct: 85 YCWVCHREGQVLCCELCPRVYHAKCL--RLTSEPEGDWFCPEC 125
Score = 38 (18.4 bits), Expect = 6.5e-09, Sum P(2) = 6.5e-09
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 70 EEVKEKEVLCAKCKSPGDQFLLCETCNGSY 99
+E K+K+ CA CK F C N SY
Sbjct: 976 DETKKKQ-WCANCKKEAI-FYCC--WNTSY 1001
Score = 34 (17.0 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 7/12 (58%), Positives = 7/12 (58%)
Query: 117 WKCPKCSCP-PL 127
W C CS P PL
Sbjct: 264 WFCEPCSNPHPL 275
>UNIPROTKB|F1PXY6 [details] [associations]
symbol:PHRF1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016 PROSITE:PS50089
SMART:SM00184 SMART:SM00249 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR017907 OMA:YMKKLHM
GeneTree:ENSGT00530000063661 EMBL:AAEX03011329
Ensembl:ENSCAFT00000010559 Uniprot:F1PXY6
Length = 1637
Score = 148 (57.2 bits), Expect = 6.6e-09, P = 6.6e-09
Identities = 29/73 (39%), Positives = 38/73 (52%)
Query: 8 QTEHQDYCEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPET 64
+ E +CEVC + ++LCD C YH+ CLDP L E P +W CP C + G
Sbjct: 184 EEEDPTFCEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQEVPVDEWFCPECAAPGA--A 241
Query: 65 ASPPAEEVKEKEV 77
A A V E+EV
Sbjct: 242 ADADAGPVSEEEV 254
Score = 128 (50.1 bits), Expect = 8.8e-07, P = 8.8e-07
Identities = 26/67 (38%), Positives = 36/67 (53%)
Query: 61 PPETASPPAEEVKEKEVLCAKC-KSPG-DQFLLCETCNGSYHPHCLPDPIEGELPTSGWK 118
P E A EE +E C C +S D+ LLC+ C+ YH CL P++ E+P W
Sbjct: 174 PVENARA-GEEEEEDPTFCEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQ-EVPVDEWF 231
Query: 119 CPKCSCP 125
CP+C+ P
Sbjct: 232 CPECAAP 238
>UNIPROTKB|I3LU11 [details] [associations]
symbol:PHRF1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0035556 "intracellular signal transduction"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR002219
InterPro:IPR019787 Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016
PROSITE:PS50089 SMART:SM00109 SMART:SM00184 SMART:SM00249
Prosite:PS00518 GO:GO:0035556 GO:GO:0046872 GO:GO:0008270
GO:GO:0005622 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR017907 OMA:YMKKLHM
GeneTree:ENSGT00530000063661 EMBL:FP015900
Ensembl:ENSSSCT00000024857 Uniprot:I3LU11
Length = 1643
Score = 148 (57.2 bits), Expect = 6.6e-09, P = 6.6e-09
Identities = 28/73 (38%), Positives = 39/73 (53%)
Query: 8 QTEHQDYCEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPET 64
+ E +CEVC + ++LCD C YH+ CL+P L E P +W CP C + G
Sbjct: 178 EEEDPTFCEVCGRSDREDRLLLCDGCDAGYHMECLEPPLQEVPVDEWFCPECTASGAASA 237
Query: 65 ASPPAEEVKEKEV 77
A+ A V E+EV
Sbjct: 238 AAD-AGPVSEEEV 249
Score = 113 (44.8 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 21/56 (37%), Positives = 31/56 (55%)
Query: 70 EEVKEKEVLCAKC-KSPG-DQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKCS 123
E +E C C +S D+ LLC+ C+ YH CL P++ E+P W CP+C+
Sbjct: 176 EHEEEDPTFCEVCGRSDREDRLLLCDGCDAGYHMECLEPPLQ-EVPVDEWFCPECT 230
>UNIPROTKB|D5LMF5 [details] [associations]
symbol:zmynd8 "Zinc finger and MYND domain containing
protein 8" species:8355 "Xenopus laevis" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0007399 "nervous system development"
evidence=IMP] [GO:0070491 "repressing transcription factor binding"
evidence=IPI] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR002893 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01753 PRINTS:PR00503 PROSITE:PS01360 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50865 SMART:SM00249 SMART:SM00297
Pfam:PF00855 GO:GO:0005634 GO:GO:0007399 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0001106 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 CTD:23613 InterPro:IPR021931
Pfam:PF12064 EMBL:GU942747 RefSeq:NP_001170911.1 UniGene:Xl.18946
GeneID:733267 KEGG:xla:733267 Xenbase:XB-GENE-6253445
Uniprot:D5LMF5
Length = 1165
Score = 134 (52.2 bits), Expect = 6.8e-09, Sum P(2) = 6.8e-09
Identities = 21/43 (48%), Positives = 27/43 (62%)
Query: 14 YCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
YC VC + G+++ C+ CPR YH CL +L PEG W CP C
Sbjct: 130 YCWVCHREGQVLCCELCPRVYHAKCL--KLTAEPEGDWFCPEC 170
Score = 38 (18.4 bits), Expect = 6.8e-09, Sum P(2) = 6.8e-09
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 70 EEVKEKEVLCAKCKSPGDQFLLCETCNGSY 99
+E K+K+ CA CK F C N SY
Sbjct: 1066 DETKKKQ-WCANCKKEAI-FYCC--WNTSY 1091
Score = 34 (17.0 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 7/12 (58%), Positives = 7/12 (58%)
Query: 117 WKCPKCSCP-PL 127
W C CS P PL
Sbjct: 309 WFCEPCSNPHPL 320
>UNIPROTKB|J3KPU3 [details] [associations]
symbol:ZMYND8 "Protein kinase C-binding protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR002893 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01753 PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50865 SMART:SM00249 SMART:SM00297 Pfam:PF00855
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 EMBL:AL049540 EMBL:AL031666
HGNC:HGNC:9397 InterPro:IPR021931 Pfam:PF12064 EMBL:AL390212
ProteinModelPortal:J3KPU3 Ensembl:ENST00000396281 Uniprot:J3KPU3
Length = 1186
Score = 134 (52.2 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
Identities = 21/43 (48%), Positives = 26/43 (60%)
Query: 14 YCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
YC VC + G+++ C+ CPR YH CL L PEG W CP C
Sbjct: 90 YCWVCHREGQVLCCELCPRVYHAKCL--RLTSEPEGDWFCPEC 130
Score = 38 (18.4 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 70 EEVKEKEVLCAKCKSPGDQFLLCETCNGSY 99
+E K+K+ CA CK F C N SY
Sbjct: 1020 DETKKKQ-WCANCKKEAI-FYCC--WNTSY 1045
Score = 34 (17.0 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 7/12 (58%), Positives = 7/12 (58%)
Query: 117 WKCPKCSCP-PL 127
W C CS P PL
Sbjct: 269 WFCEPCSNPHPL 280
>UNIPROTKB|Q9ULU4 [details] [associations]
symbol:ZMYND8 "Protein kinase C-binding protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISS] [GO:0070491 "repressing
transcription factor binding" evidence=ISS] [GO:0001106 "RNA
polymerase II transcription corepressor activity" evidence=ISS]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISS] InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR002893 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01753 PROSITE:PS01360
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50865 SMART:SM00249
SMART:SM00297 EMBL:U48251 Pfam:PF00855 GO:GO:0005634 EMBL:CH471077
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0001106 Gene3D:1.20.920.10 SUPFAM:SSF47370
eggNOG:COG5076 InterPro:IPR000313 PROSITE:PS50812 GO:GO:0070491
EMBL:AL049540 EMBL:AL022342 EMBL:AF233453 EMBL:AF454056
EMBL:AF273045 EMBL:DQ082998 EMBL:DQ082999 EMBL:DQ368673
EMBL:DQ368674 EMBL:DQ368679 EMBL:DQ368669 EMBL:DQ368670
EMBL:DQ368671 EMBL:AB032951 EMBL:AK299899 EMBL:BX641005
EMBL:AL031666 EMBL:BC030721 IPI:IPI00385321 IPI:IPI00418316
IPI:IPI00640598 IPI:IPI00718938 IPI:IPI00719508 IPI:IPI00741204
IPI:IPI00789719 IPI:IPI00941061 IPI:IPI00946867 IPI:IPI01008745
IPI:IPI01008942 IPI:IPI01008945 IPI:IPI01008959 IPI:IPI01014325
RefSeq:NP_036540.3 RefSeq:NP_898868.1 RefSeq:NP_898869.1
UniGene:Hs.446240 UniGene:Hs.658553 UniGene:Hs.668465
ProteinModelPortal:Q9ULU4 SMR:Q9ULU4 IntAct:Q9ULU4
MINT:MINT-1183677 STRING:Q9ULU4 PhosphoSite:Q9ULU4 DMDM:25453223
PaxDb:Q9ULU4 PRIDE:Q9ULU4 Ensembl:ENST00000311275
Ensembl:ENST00000352431 Ensembl:ENST00000355972
Ensembl:ENST00000360911 Ensembl:ENST00000461685 GeneID:23613
KEGG:hsa:23613 UCSC:uc002xsu.1 UCSC:uc002xsw.1 UCSC:uc002xsx.1
UCSC:uc002xta.1 UCSC:uc002xtb.1 UCSC:uc002xtc.1 UCSC:uc002xtd.1
UCSC:uc002xte.1 UCSC:uc002xtf.1 UCSC:uc010zya.1 CTD:23613
GeneCards:GC20M045837 H-InvDB:HIX0015888 HGNC:HGNC:9397
HPA:HPA020949 neXtProt:NX_Q9ULU4 PharmGKB:PA162409890
HOVERGEN:HBG031823 GenomeRNAi:23613 NextBio:46322
ArrayExpress:Q9ULU4 Bgee:Q9ULU4 CleanEx:HS_ZMYND8
Genevestigator:Q9ULU4 GermOnline:ENSG00000101040 InterPro:IPR021931
Pfam:PF12064 Uniprot:Q9ULU4
Length = 1186
Score = 134 (52.2 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
Identities = 21/43 (48%), Positives = 26/43 (60%)
Query: 14 YCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
YC VC + G+++ C+ CPR YH CL L PEG W CP C
Sbjct: 90 YCWVCHREGQVLCCELCPRVYHAKCL--RLTSEPEGDWFCPEC 130
Score = 38 (18.4 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 70 EEVKEKEVLCAKCKSPGDQFLLCETCNGSY 99
+E K+K+ CA CK F C N SY
Sbjct: 1020 DETKKKQ-WCANCKKEAI-FYCC--WNTSY 1045
Score = 34 (17.0 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 7/12 (58%), Positives = 7/12 (58%)
Query: 117 WKCPKCSCP-PL 127
W C CS P PL
Sbjct: 269 WFCEPCSNPHPL 280
>UNIPROTKB|F1MY77 [details] [associations]
symbol:ZMYND8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR002893
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01753
PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50865
SMART:SM00249 SMART:SM00297 Pfam:PF00855 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 InterPro:IPR021931 Pfam:PF12064
GeneTree:ENSGT00530000063428 OMA:VDNIRRK EMBL:DAAA02036805
IPI:IPI00727342 UniGene:Bt.52435 Ensembl:ENSBTAT00000004258
NextBio:20867417 Uniprot:F1MY77
Length = 1193
Score = 134 (52.2 bits), Expect = 7.2e-09, Sum P(2) = 7.2e-09
Identities = 21/43 (48%), Positives = 26/43 (60%)
Query: 14 YCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
YC VC + G+++ C+ CPR YH CL L PEG W CP C
Sbjct: 110 YCWVCHREGQVLCCELCPRVYHAKCL--RLTSEPEGDWFCPEC 150
Score = 38 (18.4 bits), Expect = 7.2e-09, Sum P(2) = 7.2e-09
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 70 EEVKEKEVLCAKCKSPGDQFLLCETCNGSY 99
+E K+K+ CA CK F C N SY
Sbjct: 999 DETKKKQ-WCANCKKEAI-FYCC--WNTSY 1024
Score = 34 (17.0 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 7/12 (58%), Positives = 7/12 (58%)
Query: 117 WKCPKCSCP-PL 127
W C CS P PL
Sbjct: 289 WFCEPCSNPHPL 300
>UNIPROTKB|F1NME8 [details] [associations]
symbol:Gga.29865 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR002893
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01753
PRINTS:PR00503 PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50865 SMART:SM00249 SMART:SM00297 Pfam:PF00855
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 InterPro:IPR021931 Pfam:PF12064
GeneTree:ENSGT00530000063428 OMA:VDNIRRK EMBL:AADN02019301
IPI:IPI00581329 Ensembl:ENSGALT00000007232 Uniprot:F1NME8
Length = 1197
Score = 134 (52.2 bits), Expect = 7.3e-09, Sum P(2) = 7.3e-09
Identities = 21/43 (48%), Positives = 27/43 (62%)
Query: 14 YCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
YC VC + G+++ C+ CPR YH CL +L PEG W CP C
Sbjct: 108 YCWVCHREGQVLCCELCPRVYHAKCL--KLTAEPEGDWFCPEC 148
Score = 38 (18.4 bits), Expect = 7.3e-09, Sum P(2) = 7.3e-09
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 70 EEVKEKEVLCAKCKSPGDQFLLCETCNGSY 99
+E K+K+ CA CK F C N SY
Sbjct: 1032 DETKKKQ-WCANCKKEAI-FYCC--WNTSY 1057
Score = 34 (17.0 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 7/12 (58%), Positives = 7/12 (58%)
Query: 117 WKCPKCSCP-PL 127
W C CS P PL
Sbjct: 287 WFCEPCSNPHPL 298
>UNIPROTKB|D4A3B4 [details] [associations]
symbol:D4A3B4 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00558
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
GeneTree:ENSGT00530000063118 IPI:IPI00949627
Ensembl:ENSRNOT00000067288 ArrayExpress:D4A3B4 Uniprot:D4A3B4
Length = 1490
Score = 134 (52.2 bits), Expect = 7.4e-09, Sum P(2) = 7.4e-09
Identities = 25/55 (45%), Positives = 32/55 (58%)
Query: 15 CEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVS---DGPPE 63
C +C +G E ++LCD C YH+ CL P L E P+G W CP+CV PPE
Sbjct: 286 CRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWRCPKCVMAECKRPPE 340
Score = 110 (43.8 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 78 LCAKCK--SPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC 122
+C C D+ LLC+ C+ +YH CL P+ E+P W+CPKC
Sbjct: 285 VCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLP-EIPKGVWRCPKC 330
Score = 40 (19.1 bits), Expect = 7.4e-09, Sum P(2) = 7.4e-09
Identities = 8/15 (53%), Positives = 12/15 (80%)
Query: 64 TASPPAEEVKEKEVL 78
++ P AEEV+E+E L
Sbjct: 1414 SSGPEAEEVQEEEEL 1428
Score = 39 (18.8 bits), Expect = 9.4e-09, Sum P(2) = 9.4e-09
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 69 AEEVKEKEVLCAKCKSP 85
AE +EK LC + +SP
Sbjct: 939 AERWEEKAHLCLEARSP 955
Score = 37 (18.1 bits), Expect = 4.6e-06, Sum P(2) = 4.6e-06
Identities = 6/16 (37%), Positives = 10/16 (62%)
Query: 16 EVCQQGGEIILCDTCP 31
E+ Q G ++ C+T P
Sbjct: 124 EMYQSGANLVQCNTRP 139
Score = 36 (17.7 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 7/11 (63%), Positives = 7/11 (63%)
Query: 107 PIEGELPTSGW 117
P E E TSGW
Sbjct: 423 PEEEEYATSGW 433
>UNIPROTKB|G3V661 [details] [associations]
symbol:Baz1b "Bromodomain adjacent to zinc finger domain
protein 1B" species:10116 "Rattus norvegicus" [GO:0000793
"condensed chromosome" evidence=IEA] [GO:0003007 "heart
morphogenesis" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0004713 "protein tyrosine kinase activity"
evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0032947 "protein complex scaffold" evidence=IEA] [GO:0034725
"DNA replication-dependent nucleosome disassembly" evidence=IEA]
[GO:0035173 "histone kinase activity" evidence=IEA] [GO:0042809
"vitamin D receptor binding" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0043596
"nuclear replication fork" evidence=IEA] [GO:0048096
"chromatin-mediated maintenance of transcription" evidence=IEA]
[GO:0070577 "histone acetyl-lysine binding" evidence=IEA]
[GO:0071778 "WINAC complex" evidence=IEA] [GO:0071884 "vitamin D
receptor activator activity" evidence=IEA] InterPro:IPR001841
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50089 SMART:SM00184 SMART:SM00249
SMART:SM00297 RGD:1597089 GO:GO:0046872 GO:GO:0008270 EMBL:CH473973
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 InterPro:IPR018500 InterPro:IPR018501
InterPro:IPR013136 Pfam:PF10537 SMART:SM00571 PROSITE:PS50827
PROSITE:PS51136 GeneTree:ENSGT00660000095335 CTD:9031 KO:K11658
OMA:CNKAFHL EMBL:AC090529 RefSeq:NP_001178845.1 UniGene:Rn.7043
Ensembl:ENSRNOT00000001975 GeneID:368002 KEGG:rno:368002
NextBio:691979 Uniprot:G3V661
Length = 1476
Score = 147 (56.8 bits), Expect = 7.5e-09, P = 7.5e-09
Identities = 26/54 (48%), Positives = 36/54 (66%)
Query: 6 DLQTEHQDYCEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
D+ E+ C+VC++ GE +ILCD C +A+HL CL P L E P+G+W CP C
Sbjct: 1176 DMSAENAR-CKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPAC 1228
Score = 109 (43.4 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 71 EVKEKEVLCAKCKSPG--DQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKCSCPP 126
++ + C C+ G D+ +LC+ CN ++H CL P E+P W+CP C PP
Sbjct: 1176 DMSAENARCKVCRKKGEDDKLILCDECNKAFHLFCLR-PALYEVPDGEWQCPACQ-PP 1231
>MGI|MGI:1353499 [details] [associations]
symbol:Baz1b "bromodomain adjacent to zinc finger domain,
1B" species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000793 "condensed chromosome" evidence=IDA]
[GO:0003007 "heart morphogenesis" evidence=IMP] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0004713 "protein tyrosine
kinase activity" evidence=ISO] [GO:0004715 "non-membrane spanning
protein tyrosine kinase activity" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005721
"centromeric heterochromatin" evidence=IDA] [GO:0006302
"double-strand break repair" evidence=IMP] [GO:0006333 "chromatin
assembly or disassembly" evidence=IDA] [GO:0006337 "nucleosome
disassembly" evidence=ISO] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016572 "histone
phosphorylation" evidence=ISO] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0032947 "protein complex scaffold" evidence=ISO]
[GO:0034725 "DNA replication-dependent nucleosome disassembly"
evidence=ISO] [GO:0035173 "histone kinase activity" evidence=ISO]
[GO:0042393 "histone binding" evidence=IPI] [GO:0042809 "vitamin D
receptor binding" evidence=ISO] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048096 "chromatin-mediated maintenance of
transcription" evidence=IMP] [GO:0070577 "histone acetyl-lysine
binding" evidence=ISO] [GO:0071778 "WINAC complex" evidence=ISO]
[GO:0071884 "vitamin D receptor activator activity"
evidence=ISO;IMP] InterPro:IPR001841 InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS50016 SMART:SM00184
SMART:SM00249 SMART:SM00297 MGI:MGI:1353499 GO:GO:0005524
GO:GO:0046872 GO:GO:0003007 GO:GO:0008270 EMBL:CH466529
GO:GO:0006351 GO:GO:0003682 GO:GO:0004715 GO:GO:0004713
GO:GO:0043596 GO:GO:0006333 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006302 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005721 GO:GO:0000793 GO:GO:0048096
GO:GO:0016585 GO:GO:0043044 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 eggNOG:COG5076 GO:GO:0070577 InterPro:IPR018359
InterPro:IPR018500 InterPro:IPR018501 InterPro:IPR013136
Pfam:PF10537 SMART:SM00571 PROSITE:PS50827 PROSITE:PS51136
GeneTree:ENSGT00660000095335 CTD:9031 HOVERGEN:HBG050668 KO:K11658
OMA:CNKAFHL OrthoDB:EOG4MKNFK ChiTaRS:BAZ1B GO:GO:0071778
GO:GO:0035173 GO:GO:0071884 GO:GO:0034725 EMBL:AF084480
EMBL:BC141399 EMBL:AK017894 EMBL:AK037737 EMBL:AK137139
EMBL:AK140172 EMBL:AK141305 IPI:IPI00923656 IPI:IPI00930843
PIR:T17401 RefSeq:NP_035844.2 UniGene:Mm.40331
ProteinModelPortal:Q9Z277 SMR:Q9Z277 DIP:DIP-36072N IntAct:Q9Z277
STRING:Q9Z277 PhosphoSite:Q9Z277 PaxDb:Q9Z277 PRIDE:Q9Z277
Ensembl:ENSMUST00000002825 GeneID:22385 KEGG:mmu:22385
UCSC:uc008zxz.2 InParanoid:Q3USR7 NextBio:302753 Bgee:Q9Z277
CleanEx:MM_BAZ1B Genevestigator:Q9Z277
GermOnline:ENSMUSG00000002748 Uniprot:Q9Z277
Length = 1479
Score = 147 (56.8 bits), Expect = 7.5e-09, P = 7.5e-09
Identities = 26/54 (48%), Positives = 36/54 (66%)
Query: 6 DLQTEHQDYCEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
D+ E+ C+VC++ GE +ILCD C +A+HL CL P L E P+G+W CP C
Sbjct: 1179 DMSAENAR-CKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPAC 1231
Score = 109 (43.4 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 20/58 (34%), Positives = 31/58 (53%)
Query: 71 EVKEKEVLCAKCKSPG--DQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKCSCPP 126
++ + C C+ G D+ +LC+ CN ++H CL P E+P W+CP C PP
Sbjct: 1179 DMSAENARCKVCRKKGEDDKLILCDECNKAFHLFCLR-PALYEVPDGEWQCPACQ-PP 1234
>UNIPROTKB|F1M0S9 [details] [associations]
symbol:Zmynd8 "Protein Zmynd8" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR002893
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF01753
PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50865
SMART:SM00249 SMART:SM00297 Pfam:PF00855 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 InterPro:IPR021931 Pfam:PF12064
RGD:1309544 IPI:IPI00949507 Ensembl:ENSRNOT00000065165
ArrayExpress:F1M0S9 Uniprot:F1M0S9
Length = 1226
Score = 134 (52.2 bits), Expect = 7.7e-09, Sum P(2) = 7.7e-09
Identities = 21/43 (48%), Positives = 26/43 (60%)
Query: 14 YCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
YC VC + G+++ C+ CPR YH CL L PEG W CP C
Sbjct: 87 YCWVCHREGQVLCCELCPRVYHAKCL--RLTSEPEGDWFCPEC 127
Score = 38 (18.4 bits), Expect = 7.7e-09, Sum P(2) = 7.7e-09
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 70 EEVKEKEVLCAKCKSPGDQFLLCETCNGSY 99
+E K+K+ CA CK F C N SY
Sbjct: 1027 DETKKKQ-WCANCKKEAI-FYCC--WNTSY 1052
Score = 34 (17.0 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 7/12 (58%), Positives = 7/12 (58%)
Query: 117 WKCPKCSCP-PL 127
W C CS P PL
Sbjct: 266 WFCEPCSNPHPL 277
>UNIPROTKB|F5H0X3 [details] [associations]
symbol:ZMYND8 "Protein kinase C-binding protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR001965
InterPro:IPR002893 InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628
Pfam:PF01753 PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016
PROSITE:PS50865 SMART:SM00249 SMART:SM00297 Pfam:PF00855
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 EMBL:AL049540 EMBL:AL031666
IPI:IPI00418316 HGNC:HGNC:9397 InterPro:IPR021931 Pfam:PF12064
EMBL:AL390212 ProteinModelPortal:F5H0X3 SMR:F5H0X3 PRIDE:F5H0X3
Ensembl:ENST00000536340 UCSC:uc010zxy.1 OMA:VDNIRRK
ArrayExpress:F5H0X3 Bgee:F5H0X3 Uniprot:F5H0X3
Length = 1241
Score = 134 (52.2 bits), Expect = 7.9e-09, Sum P(2) = 7.9e-09
Identities = 21/43 (48%), Positives = 26/43 (60%)
Query: 14 YCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
YC VC + G+++ C+ CPR YH CL L PEG W CP C
Sbjct: 117 YCWVCHREGQVLCCELCPRVYHAKCL--RLTSEPEGDWFCPEC 157
Score = 38 (18.4 bits), Expect = 7.9e-09, Sum P(2) = 7.9e-09
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 70 EEVKEKEVLCAKCKSPGDQFLLCETCNGSY 99
+E K+K+ CA CK F C N SY
Sbjct: 1047 DETKKKQ-WCANCKKEAI-FYCC--WNTSY 1072
Score = 34 (17.0 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 7/12 (58%), Positives = 7/12 (58%)
Query: 117 WKCPKCSCP-PL 127
W C CS P PL
Sbjct: 296 WFCEPCSNPHPL 307
>ZFIN|ZDB-GENE-030131-2199 [details] [associations]
symbol:prkcbp1l "protein kinase C binding protein
1, like" species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] InterPro:IPR001487
InterPro:IPR001965 InterPro:IPR002893 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 Pfam:PF01753 PRINTS:PR00503
PROSITE:PS01360 PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50865
SMART:SM00249 SMART:SM00297 Pfam:PF00855 ZFIN:ZDB-GENE-030131-2199
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 InterPro:IPR021931 Pfam:PF12064
GeneTree:ENSGT00530000063428 EMBL:BX324190 IPI:IPI00611878
Ensembl:ENSDART00000124510 ArrayExpress:F1QYK7 Bgee:F1QYK7
Uniprot:F1QYK7
Length = 1131
Score = 133 (51.9 bits), Expect = 8.1e-09, Sum P(2) = 8.1e-09
Identities = 21/43 (48%), Positives = 27/43 (62%)
Query: 14 YCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
YC VC + G+++ C+ CPR YH CL +L PEG W CP C
Sbjct: 110 YCWVCHREGQVLCCELCPRVYHAKCL--KLAAEPEGDWFCPEC 150
Score = 38 (18.4 bits), Expect = 8.1e-09, Sum P(2) = 8.1e-09
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 70 EEVKEKEVLCAKCKSPGDQFLLCETCNGSY 99
+E K+K+ CA CK F C N SY
Sbjct: 1027 DETKKKQ-WCANCKKEAI-FYCC--WNTSY 1052
Score = 34 (17.0 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 7/12 (58%), Positives = 7/12 (58%)
Query: 117 WKCPKCSCP-PL 127
W C CS P PL
Sbjct: 289 WFCEPCSQPHPL 300
>MGI|MGI:99781 [details] [associations]
symbol:Kdm5c "lysine (K)-specific demethylase 5C"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0001085 "RNA polymerase II transcription factor binding"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016706 "oxidoreductase activity, acting
on paired donors, with incorporation or reduction of molecular
oxygen, 2-oxoglutarate as one donor, and incorporation of one atom
each of oxygen into both donors" evidence=IEA] [GO:0032453 "histone
demethylase activity (H3-K4 specific)" evidence=ISO] [GO:0034720
"histone H3-K4 demethylation" evidence=ISO] [GO:0042802 "identical
protein binding" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] InterPro:IPR001606 InterPro:IPR001965
InterPro:IPR003347 InterPro:IPR004198 InterPro:IPR013637
InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388 Pfam:PF02373
Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016 PROSITE:PS51011
PROSITE:PS51184 SMART:SM00249 SMART:SM00501 SMART:SM00558
MGI:MGI:99781 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0016706
GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
eggNOG:NOG327026 GeneTree:ENSGT00530000063118 GO:GO:0032453
KO:K11446 CTD:8242 OrthoDB:EOG4894KP ChiTaRS:KDM5C EMBL:AF127245
EMBL:AK008105 EMBL:AK155279 EMBL:AK155427 EMBL:AK155651
EMBL:AK158340 EMBL:AK011577 EMBL:BC043096 EMBL:BC054550 EMBL:Z29651
EMBL:AK129096 EMBL:L29563 EMBL:AF039894 IPI:IPI00112611
IPI:IPI00221399 IPI:IPI00776021 PIR:I48775 PIR:I84689
RefSeq:NP_038696.2 UniGene:Mm.142655 ProteinModelPortal:P41230
SMR:P41230 STRING:P41230 PhosphoSite:P41230 PaxDb:P41230
PRIDE:P41230 Ensembl:ENSMUST00000082177 Ensembl:ENSMUST00000112584
Ensembl:ENSMUST00000112588 GeneID:20591 KEGG:mmu:20591
UCSC:uc009uqc.2 UCSC:uc009uqd.2 UCSC:uc009uqe.2 InParanoid:P41230
NextBio:298901 Bgee:P41230 Genevestigator:P41230
GermOnline:ENSMUSG00000025332 Uniprot:P41230
Length = 1554
Score = 134 (52.2 bits), Expect = 8.1e-09, Sum P(2) = 8.1e-09
Identities = 25/55 (45%), Positives = 32/55 (58%)
Query: 15 CEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVS---DGPPE 63
C +C +G E ++LCD C YH+ CL P L E P+G W CP+CV PPE
Sbjct: 327 CRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPEIPKGVWRCPKCVMAECKRPPE 381
Score = 110 (43.8 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 78 LCAKCK--SPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC 122
+C C D+ LLC+ C+ +YH CL P+ E+P W+CPKC
Sbjct: 326 VCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLP-EIPKGVWRCPKC 371
Score = 40 (19.1 bits), Expect = 8.1e-09, Sum P(2) = 8.1e-09
Identities = 8/15 (53%), Positives = 12/15 (80%)
Query: 64 TASPPAEEVKEKEVL 78
++ P AEEV+E+E L
Sbjct: 1478 SSGPEAEEVQEEEEL 1492
Score = 37 (18.1 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 6/16 (37%), Positives = 10/16 (62%)
Query: 16 EVCQQGGEIILCDTCP 31
E+ Q G ++ C+T P
Sbjct: 165 EMYQSGANLVQCNTRP 180
Score = 36 (17.7 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 7/11 (63%), Positives = 7/11 (63%)
Query: 107 PIEGELPTSGW 117
P E E TSGW
Sbjct: 464 PEEEEYATSGW 474
>DICTYBASE|DDB_G0272064 [details] [associations]
symbol:DDB_G0272064 species:44689 "Dictyostelium
discoideum" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001005
InterPro:IPR001965 InterPro:IPR009057 InterPro:IPR019787
PROSITE:PS50016 SMART:SM00184 SMART:SM00249 SMART:SM00717
dictyBase:DDB_G0272064 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0003682 EMBL:AAFI02000007 SUPFAM:SSF46689 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR015947
SUPFAM:SSF88697 RefSeq:XP_645374.1 ProteinModelPortal:Q55A92
EnsemblProtists:DDB0216955 GeneID:8618263 KEGG:ddi:DDB_G0272064
eggNOG:NOG246263 InParanoid:Q55A92 OMA:RRSINSP Uniprot:Q55A92
Length = 2722
Score = 143 (55.4 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 36/117 (30%), Positives = 48/117 (41%)
Query: 27 CDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASPPAEEVKEKEVLCAKCKSPG 86
C TC +HL C DP L + P G W C E +S ++K C C
Sbjct: 901 CGTCESVFHLECADPPLHKIPPGTWYCSN-------ECSS--LSQLK-----CENCSKDN 946
Query: 87 --DQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKCSCPPLPGKLEDMASLLRLP 141
+ LC +CN YH CL P+ E+P W CP C +++ L LP
Sbjct: 947 KIESMALCISCNRGYHIFCLETPLF-EVPYYDWDCPTCETMKSQSADNNLSLLKELP 1002
Score = 104 (41.7 bits), Expect = 9.2e-09, Sum P(2) = 9.2e-09
Identities = 19/45 (42%), Positives = 24/45 (53%)
Query: 15 CEVCQQGGEI---ILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
CE C + +I LC +C R YH+ CL+ L E P W CP C
Sbjct: 939 CENCSKDNKIESMALCISCNRGYHIFCLETPLFEVPYYDWDCPTC 983
Score = 86 (35.3 bits), Expect = 9.2e-09, Sum P(2) = 9.2e-09
Identities = 18/53 (33%), Positives = 26/53 (49%)
Query: 72 VKEKEVLCAKCKSPG--DQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC 122
V+ K C++C + C+TC YH CL DPI+ + + W C KC
Sbjct: 2542 VESKHRACSECNKMDVKSNMITCDTCCSYYHSKCLLDPID-KSGYAYWICFKC 2593
Score = 46 (21.3 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 18/71 (25%), Positives = 28/71 (39%)
Query: 61 PPETASPPAEEVKEKEVLCAKCKSPGDQFLLCET-CNGSYHPHCLPDPIEGELPTSGWKC 119
PP P + + ++ + SP F T + P +P I +LPT+
Sbjct: 1934 PPPYVQHPLQ-LTHSDLSLQQTLSPYSSFTSSNTFTTPTTFPTTIPATIPTQLPTTTIGV 1992
Query: 120 PKCSCPPLPGK 130
P+ PP P K
Sbjct: 1993 PQL--PPKPTK 2001
>UNIPROTKB|B4E1Y0 [details] [associations]
symbol:KDM5D "Lysine-specific demethylase 5D" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016706 "oxidoreductase
activity, acting on paired donors, with incorporation or reduction
of molecular oxygen, 2-oxoglutarate as one donor, and incorporation
of one atom each of oxygen into both donors" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001606
InterPro:IPR001965 InterPro:IPR003347 InterPro:IPR004198
InterPro:IPR013637 InterPro:IPR019787 Pfam:PF00628 Pfam:PF01388
Pfam:PF02373 Pfam:PF02928 Pfam:PF08429 PROSITE:PS50016
PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249 SMART:SM00501
SMART:SM00558 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0016706 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
EMBL:AC010889 UniGene:Hs.80358 HGNC:HGNC:11115 ChiTaRS:KDM5D
HOVERGEN:HBG068574 EMBL:AK304027 IPI:IPI01013623 SMR:B4E1Y0
STRING:B4E1Y0 Ensembl:ENST00000535647 UCSC:uc004fuh.2
Uniprot:B4E1Y0
Length = 888
Score = 132 (51.5 bits), Expect = 9.3e-09, Sum P(2) = 9.3e-09
Identities = 24/55 (43%), Positives = 31/55 (56%)
Query: 15 CEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGKWSCPRCV---SDGPPE 63
C+VC +G E ++ CD C YH+ CL P L E P G W CP+C+ PPE
Sbjct: 317 CQVCSRGDEDDKLLFCDGCDDNYHIFCLLPPLPEIPRGIWRCPKCILAECKQPPE 371
Score = 105 (42.0 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 78 LCAKCK--SPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC 122
+C C D+ L C+ C+ +YH CL P+ E+P W+CPKC
Sbjct: 316 ICQVCSRGDEDDKLLFCDGCDDNYHIFCLLPPLP-EIPRGIWRCPKC 361
Score = 36 (17.7 bits), Expect = 9.3e-09, Sum P(2) = 9.3e-09
Identities = 7/11 (63%), Positives = 7/11 (63%)
Query: 107 PIEGELPTSGW 117
P E E TSGW
Sbjct: 454 PEEKEYATSGW 464
Score = 33 (16.7 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 8/25 (32%), Positives = 11/25 (44%)
Query: 60 GPPETASPPAEEVKEKEVLCAKCKS 84
G E E + + E C KCK+
Sbjct: 678 GVTEAEREAFELLPDDERQCIKCKT 702
Score = 33 (16.7 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 8/28 (28%), Positives = 14/28 (50%)
Query: 31 PRAYHLCCLDPELDETPEGKWSCPRCVS 58
P+ L + + D+T K +CP V+
Sbjct: 243 PKMMGLGLMAKDKDKTVHKKVTCPPTVT 270
>UNIPROTKB|F1P5W9 [details] [associations]
symbol:BAZ1B "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000793
"condensed chromosome" evidence=IEA] [GO:0003007 "heart
morphogenesis" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0004713 "protein tyrosine kinase activity"
evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0032947 "protein complex scaffold" evidence=IEA]
[GO:0034725 "DNA replication-dependent nucleosome disassembly"
evidence=IEA] [GO:0035173 "histone kinase activity" evidence=IEA]
[GO:0042809 "vitamin D receptor binding" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0043596
"nuclear replication fork" evidence=IEA] [GO:0048096
"chromatin-mediated maintenance of transcription" evidence=IEA]
[GO:0070577 "histone acetyl-lysine binding" evidence=IEA]
[GO:0071778 "WINAC complex" evidence=IEA] [GO:0071884 "vitamin D
receptor activator activity" evidence=IEA] InterPro:IPR001841
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 PROSITE:PS50089 SMART:SM00184 SMART:SM00249
SMART:SM00297 GO:GO:0046872 GO:GO:0008270 GO:GO:0003682
GO:GO:0004713 GO:GO:0043596 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0006302 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005721 GO:GO:0000793 GO:GO:0048096
GO:GO:0043044 Gene3D:1.20.920.10 SUPFAM:SSF47370 InterPro:IPR018500
InterPro:IPR018501 InterPro:IPR013136 Pfam:PF10537 SMART:SM00571
PROSITE:PS50827 PROSITE:PS51136 GeneTree:ENSGT00660000095335
OMA:CNKAFHL GO:GO:0071778 GO:GO:0035173 GO:GO:0071884 GO:GO:0034725
EMBL:AADN02026113 EMBL:AADN02026114 IPI:IPI00820657
Ensembl:ENSGALT00000040681 ArrayExpress:F1P5W9 Uniprot:F1P5W9
Length = 1488
Score = 146 (56.5 bits), Expect = 9.6e-09, P = 9.6e-09
Identities = 26/54 (48%), Positives = 36/54 (66%)
Query: 6 DLQTEHQDYCEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
D+ E+ C+VC++ GE +ILCD C +A+HL CL P L E P+G+W CP C
Sbjct: 1178 DMSAENAR-CKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEIPDGEWQCPAC 1230
Score = 105 (42.0 bits), Expect = 0.00044, P = 0.00044
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 71 EVKEKEVLCAKCKSPG--DQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC 122
++ + C C+ G D+ +LC+ CN ++H CL P E+P W+CP C
Sbjct: 1178 DMSAENARCKVCRKKGEDDKLILCDECNKAFHLFCLR-PALYEIPDGEWQCPAC 1230
>UNIPROTKB|Q30DN6 [details] [associations]
symbol:KDM5D "Lysine-specific demethylase 5D" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0016702 "oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016706 "oxidoreductase activity, acting on
paired donors, with incorporation or reduction of molecular oxygen,
2-oxoglutarate as one donor, and incorporation of one atom each of
oxygen into both donors" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001606 InterPro:IPR001965 InterPro:IPR003347
InterPro:IPR004198 InterPro:IPR013637 InterPro:IPR019787
Pfam:PF00628 Pfam:PF01388 Pfam:PF02373 Pfam:PF02928 Pfam:PF08429
PROSITE:PS50016 PROSITE:PS51011 PROSITE:PS51184 SMART:SM00249
SMART:SM00501 SMART:SM00558 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0016568 GO:GO:0016706
GO:GO:0016702 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.10.150.60 SUPFAM:SSF46774 HSSP:O43918
InterPro:IPR003349 PROSITE:PS51183 Pfam:PF02375 SMART:SM00545
KO:K11446 EMBL:DQ156494 RefSeq:NP_001106929.1 UniGene:Cfa.38975
ProteinModelPortal:Q30DN6 SMR:Q30DN6 GeneID:100134936
KEGG:cfa:100134936 CTD:8284 NextBio:20789320 Uniprot:Q30DN6
Length = 1545
Score = 137 (53.3 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 24/55 (43%), Positives = 31/55 (56%)
Query: 15 CEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVS---DGPPE 63
C +C +G E ++LCD C YH+ CL P L E P G W CP+C+ PPE
Sbjct: 320 CRICSRGDEDDKLLLCDGCDDTYHIFCLIPPLPEIPRGVWRCPKCIMAECKRPPE 374
Score = 108 (43.1 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 78 LCAKCK--SPGDQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC 122
+C C D+ LLC+ C+ +YH CL P+ E+P W+CPKC
Sbjct: 319 VCRICSRGDEDDKLLLCDGCDDTYHIFCLIPPLP-EIPRGVWRCPKC 364
Score = 38 (18.4 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 6/16 (37%), Positives = 10/16 (62%)
Query: 16 EVCQQGGEIILCDTCP 31
E+ Q G ++ C+T P
Sbjct: 165 EMFQSGANLVQCNTYP 180
Score = 36 (17.7 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 7/11 (63%), Positives = 7/11 (63%)
Query: 107 PIEGELPTSGW 117
P E E TSGW
Sbjct: 457 PEEEEYATSGW 467
Score = 33 (16.7 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 6/18 (33%), Positives = 11/18 (61%)
Query: 69 AEEVKEKEVLCAKCKSPG 86
A +++ +E L + C S G
Sbjct: 872 AYQIEAREALASLCPSVG 889
>UNIPROTKB|F1SBF4 [details] [associations]
symbol:ZMYND8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00439 Pfam:PF00628 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS50016 SMART:SM00249 SMART:SM00297 Pfam:PF00855
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR000313 PROSITE:PS50812 InterPro:IPR021931 Pfam:PF12064
GeneTree:ENSGT00530000063428 OMA:VDNIRRK EMBL:CU607040
Ensembl:ENSSSCT00000008158 Uniprot:F1SBF4
Length = 931
Score = 134 (52.2 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 21/43 (48%), Positives = 26/43 (60%)
Query: 14 YCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
YC VC + G+++ C+ CPR YH CL L PEG W CP C
Sbjct: 65 YCWVCHREGQVLCCELCPRVYHAKCL--RLTSEPEGDWFCPEC 105
Score = 34 (17.0 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 7/12 (58%), Positives = 7/12 (58%)
Query: 117 WKCPKCSCP-PL 127
W C CS P PL
Sbjct: 244 WFCEPCSNPHPL 255
>ZFIN|ZDB-GENE-040724-145 [details] [associations]
symbol:trim66 "tripartite motif containing 66"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000315
InterPro:IPR001487 InterPro:IPR001965 InterPro:IPR003649
InterPro:IPR019787 Pfam:PF00439 Pfam:PF00628 Pfam:PF00643
PROSITE:PS50014 PROSITE:PS50016 PROSITE:PS50119 SMART:SM00249
SMART:SM00297 SMART:SM00336 SMART:SM00502 ZFIN:ZDB-GENE-040724-145
GO:GO:0046872 GO:GO:0008270 GO:GO:0005622 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 Gene3D:1.20.920.10
SUPFAM:SSF47370 GeneTree:ENSGT00530000062982 EMBL:BX323591
IPI:IPI00516161 Ensembl:ENSDART00000076510 Uniprot:F1QYE4
Length = 1119
Score = 144 (55.7 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 23/56 (41%), Positives = 32/56 (57%)
Query: 8 QTEHQDYCEVCQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPE 63
+ E++D+C VC GG+++ CD CP+ +HL C P L P G W C C PE
Sbjct: 899 EIENEDFCAVCLIGGDLLCCDRCPKVFHLSCHVPPLHSFPVGDWICTLCRDVEQPE 954
>UNIPROTKB|E9PJ24 [details] [associations]
symbol:PHRF1 "PHD and RING finger domain-containing protein
1" species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016
PROSITE:PS50089 SMART:SM00184 SMART:SM00249 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR017907 EMBL:AP006284 HGNC:HGNC:24351
ChiTaRS:PHRF1 IPI:IPI00978364 Ensembl:ENST00000533464
UCSC:uc010qwe.2 ArrayExpress:E9PJ24 Bgee:E9PJ24 Uniprot:E9PJ24
Length = 1645
Score = 144 (55.7 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 29/73 (39%), Positives = 38/73 (52%)
Query: 8 QTEHQDYCEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPET 64
+ E +CEVC + ++LCD C YH+ CLDP L E P +W CP C + G
Sbjct: 175 EEEDPTFCEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQEVPVDEWFCPECAAPGVVLA 234
Query: 65 ASPPAEEVKEKEV 77
A A V E+EV
Sbjct: 235 AD--AGPVSEEEV 245
Score = 124 (48.7 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 23/59 (38%), Positives = 33/59 (55%)
Query: 69 AEEVKEKEVLCAKC-KSPG-DQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKCSCP 125
A E +E C C +S D+ LLC+ C+ YH CL P++ E+P W CP+C+ P
Sbjct: 172 ASEEEEDPTFCEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQ-EVPVDEWFCPECAAP 229
>UNIPROTKB|F8WEF5 [details] [associations]
symbol:PHRF1 "PHD and RING finger domain-containing protein
1" species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016
PROSITE:PS50089 SMART:SM00184 SMART:SM00249 Prosite:PS00518
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR017907 EMBL:AP006284
HGNC:HGNC:24351 ChiTaRS:PHRF1 IPI:IPI01013297
Ensembl:ENST00000413872 UCSC:uc009ybz.1 ArrayExpress:F8WEF5
Bgee:F8WEF5 Uniprot:F8WEF5
Length = 1647
Score = 144 (55.7 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 29/73 (39%), Positives = 38/73 (52%)
Query: 8 QTEHQDYCEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPET 64
+ E +CEVC + ++LCD C YH+ CLDP L E P +W CP C + G
Sbjct: 178 EEEDPTFCEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQEVPVDEWFCPECAAPGVVLA 237
Query: 65 ASPPAEEVKEKEV 77
A A V E+EV
Sbjct: 238 AD--AGPVSEEEV 248
Score = 124 (48.7 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 23/59 (38%), Positives = 33/59 (55%)
Query: 69 AEEVKEKEVLCAKC-KSPG-DQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKCSCP 125
A E +E C C +S D+ LLC+ C+ YH CL P++ E+P W CP+C+ P
Sbjct: 175 ASEEEEDPTFCEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQ-EVPVDEWFCPECAAP 232
>UNIPROTKB|Q9P1Y6 [details] [associations]
symbol:PHRF1 "PHD and RING finger domain-containing protein
1" species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0019904 "protein domain specific binding" evidence=IEA]
[GO:0070063 "RNA polymerase binding" evidence=ISS]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 Pfam:PF13639 PROSITE:PS50016 PROSITE:PS50089
SMART:SM00184 SMART:SM00249 Prosite:PS00518 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0006397 GO:GO:0006366
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS01359 InterPro:IPR017907 EMBL:AP006284
PharmGKB:PA164718737 HSSP:Q9UIG0 EMBL:AB040975 EMBL:BC004950
EMBL:BC013381 EMBL:BC029651 EMBL:BC041631 EMBL:BC136615
EMBL:BC144293 EMBL:BC146771 IPI:IPI00001813 IPI:IPI00827706
IPI:IPI00942878 RefSeq:NP_065952.2 UniGene:Hs.325838
ProteinModelPortal:Q9P1Y6 SMR:Q9P1Y6 IntAct:Q9P1Y6 STRING:Q9P1Y6
PhosphoSite:Q9P1Y6 DMDM:296439275 PaxDb:Q9P1Y6 PRIDE:Q9P1Y6
Ensembl:ENST00000264555 Ensembl:ENST00000416188
Ensembl:ENST00000534320 GeneID:57661 KEGG:hsa:57661 UCSC:uc001lqe.3
UCSC:uc010qwc.2 CTD:57661 GeneCards:GC11P000567 H-InvDB:HIX0201594
HGNC:HGNC:24351 HPA:HPA019867 MIM:611780 neXtProt:NX_Q9P1Y6
PharmGKB:PA164724459 eggNOG:NOG300312 HOVERGEN:HBG108250
InParanoid:Q9P1Y6 OMA:YMKKLHM OrthoDB:EOG4MSD0F ChiTaRS:PHRF1
GenomeRNAi:57661 NextBio:64425 ArrayExpress:Q9P1Y6 Bgee:Q9P1Y6
CleanEx:HS_PHRF1 Genevestigator:Q9P1Y6 GO:GO:0070063 Uniprot:Q9P1Y6
Length = 1649
Score = 144 (55.7 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 29/73 (39%), Positives = 38/73 (52%)
Query: 8 QTEHQDYCEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPET 64
+ E +CEVC + ++LCD C YH+ CLDP L E P +W CP C + G
Sbjct: 179 EEEDPTFCEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQEVPVDEWFCPECAAPGVVLA 238
Query: 65 ASPPAEEVKEKEV 77
A A V E+EV
Sbjct: 239 AD--AGPVSEEEV 249
Score = 124 (48.7 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 23/59 (38%), Positives = 33/59 (55%)
Query: 69 AEEVKEKEVLCAKC-KSPG-DQFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKCSCP 125
A E +E C C +S D+ LLC+ C+ YH CL P++ E+P W CP+C+ P
Sbjct: 176 ASEEEEDPTFCEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQ-EVPVDEWFCPECAAP 233
>UNIPROTKB|J9NSP5 [details] [associations]
symbol:MLL2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008168 "methyltransferase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF00856
InterPro:IPR009071 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR003888 InterPro:IPR003889 InterPro:IPR019787
Pfam:PF00628 Pfam:PF05964 Pfam:PF05965 PROSITE:PS50016
PROSITE:PS50089 PROSITE:PS50280 PROSITE:PS51542 PROSITE:PS51543
SMART:SM00184 SMART:SM00249 SMART:SM00317 SMART:SM00541
SMART:SM00542 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
SMART:SM00398 SUPFAM:SSF47095 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0008168 InterPro:IPR003616
SMART:SM00508 PROSITE:PS50868 GeneTree:ENSGT00690000101661
EMBL:AAEX03015073 Ensembl:ENSCAFT00000045185 Uniprot:J9NSP5
Length = 4515
Score = 142 (55.0 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 33/89 (37%), Positives = 41/89 (46%)
Query: 15 CEVCQQGGE---IILCDTCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASPPAE- 70
CEVC Q + ++LCD C +YH CLDP L P+G W C CVS ASP
Sbjct: 792 CEVCGQASDPSRLLLCDDCDISYHTYCLDPPLLTVPKGGWKCKWCVSCMQCGAASPGFHC 851
Query: 71 EVKEKEVLCAKCKSPGDQFLLCETCNGSY 99
E + C C S + C C+ Y
Sbjct: 852 EWQNSYTHCGPCAS----LVTCPICHTPY 876
Score = 136 (52.9 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 39/130 (30%), Positives = 59/130 (45%)
Query: 15 CEVCQQGG---EIILCDTCPRAYHLCCLDPELDETPEGKWSCPRCV---SDGPPETASPP 68
C+ C++ G ++++C+TC + YH CL P ++E P W C C + G P
Sbjct: 166 CQACRKPGNDSKMLVCETCDKGYHTFCLKPPMEELPAHSWKCKACRVCRACGAGSAELNP 225
Query: 69 AEEVKEKEVLCAKC-KSPGDQFL--LCE----TCNGSYHPH--CLPDPIE-GELPTSGWK 118
E E LC +C K+ G Q + + E C+ S P C P+E G+ PT K
Sbjct: 226 NSEWFENYSLCHRCHKAQGGQLIGSVAEQHPPVCS-SLLPSTLCRFSPLEPGDTPTDEPK 284
Query: 119 CPKCSCPPLP 128
+C P
Sbjct: 285 ALYVACQGQP 294
Score = 132 (51.5 bits), Expect = 9.9e-07, P = 9.9e-07
Identities = 34/112 (30%), Positives = 48/112 (42%)
Query: 15 CEVCQQGGEIILCDT--CPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASPPAEEV 72
C C + G I C + CPR YH C T G + + + PE S A +
Sbjct: 60 CSHCTRLGASIPCRSPGCPRLYHFPCA------TASGSFLSMKTLQLLCPEH-SEGAAHL 112
Query: 73 KEKEVLCAKCKSPGD--QFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC 122
+E CA C+ PG+ C +C YH CL + +GW+CP+C
Sbjct: 113 AIEEARCAVCEGPGELCDLFFCTSCGHHYHGACLDTALTAR-KRAGWQCPEC 163
Score = 130 (50.8 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 78 LCAKCKSPGD--QFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC 122
+C C+ PG+ + L+CETC+ YH CL P+E ELP WKC C
Sbjct: 165 VCQACRKPGNDSKMLVCETCDKGYHTFCLKPPME-ELPAHSWKCKAC 210
Score = 110 (43.8 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 21/51 (41%), Positives = 29/51 (56%)
Query: 77 VLCAKCKSPGD--QFLLCETCNGSYHPHCLPDPIEGELPTSGWKCPKC-SC 124
++C C D + LLC+ C+ SYH +CL P+ +P GWKC C SC
Sbjct: 790 IVCEVCGQASDPSRLLLCDDCDISYHTYCLDPPLL-TVPKGGWKCKWCVSC 839
Score = 38 (18.4 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 10/24 (41%), Positives = 12/24 (50%)
Query: 105 PDPIEGELPTSGWKCPKCSCPPLP 128
P+ + G L SG K S PP P
Sbjct: 2331 PEGLRG-LAVSGLPPQKPSAPPAP 2353
Score = 35 (17.4 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 13/37 (35%), Positives = 17/37 (45%)
Query: 38 CLDPELDETPEGKW-SCPRCVSDGPPETA-SPPAEEV 72
CL P +E W PR +S P + SP EE+
Sbjct: 608 CLSPAPEELRLPLWLEEPR-LSPRPEKPCLSPAPEEI 643
>UNIPROTKB|E1C6X8 [details] [associations]
symbol:WHSC1L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0018024 "histone-lysine
N-methyltransferase activity" evidence=IEA] InterPro:IPR001841
Pfam:PF00856 InterPro:IPR001214 InterPro:IPR001965
InterPro:IPR006560 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
PROSITE:PS50280 PROSITE:PS51215 SMART:SM00184 SMART:SM00249
SMART:SM00317 SMART:SM00570 Pfam:PF00855 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0018024 InterPro:IPR003616 SMART:SM00508
PROSITE:PS50868 GeneTree:ENSGT00700000104009 InterPro:IPR000313
PROSITE:PS50812 SMART:SM00293 CTD:54904 KO:K11425 OMA:MEKDIHK
EMBL:AADN02054858 IPI:IPI00603343 RefSeq:XP_001232891.1
UniGene:Gga.29652 UniGene:Gga.53440 Ensembl:ENSGALT00000005228
GeneID:426778 KEGG:gga:426778 NextBio:20828194 Uniprot:E1C6X8
Length = 1436
Score = 143 (55.4 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 42/122 (34%), Positives = 51/122 (41%)
Query: 11 HQDYCEVCQQGGEIILCDT--CPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETASPP 68
H+D C C GGE+++CD CP+AYHL CL+ L + P GKW CP D S P
Sbjct: 1319 HEDNCFQCGDGGELVMCDKKDCPKAYHLLCLN--LTQPPFGKWECPWHQCD----ICSSP 1372
Query: 69 AEEVKEKEVLCAK--CKSPGDQFLLCETCNGSY--HPHCLPDPIEGELPTSGWKCPKCSC 124
A E C CK LL +G H P+ E W KC
Sbjct: 1373 AVSFCE---FCPHSFCKDHEKGALLASALDGRLCCSTHDPKSPVAPEY----WNKIKCKL 1425
Query: 125 PP 126
P
Sbjct: 1426 EP 1427
Score = 113 (44.8 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 33/121 (27%), Positives = 48/121 (39%)
Query: 9 TEHQD-YCEVCQQGGE-IILCD-TCPRAYHLCCLDPELDETPEGKWSCPRCVSDGPPETA 65
T +D C++C+ GE ++ C+ C +H+ CL L PE K+ C C
Sbjct: 695 TNKKDTVCQICESSGESLVSCEGECCSTFHMECLG--LKAMPEEKFFCTEC--------- 743
Query: 66 SPPAEEVKEKEVLCAKCKSPGDQFLLCET--CNGSYHPHCLPDPIEGELPTSGWKCPKCS 123
K E C CK PG C C YH C+ + G++CP+
Sbjct: 744 -------KNGEHTCFSCKLPGKDVKRCSVSACGKFYHEACVRKFATALFESRGFRCPQHC 796
Query: 124 C 124
C
Sbjct: 797 C 797
Score = 103 (41.3 bits), Expect = 0.0010, Sum P(2) = 0.0010
Identities = 15/39 (38%), Positives = 28/39 (71%)
Query: 18 CQQGGEIILCDTCPRAYHLCCLDPELDETPEGKWSCPRC 56
C++GG+++ C++CP ++H CL+ ++ PEG W+C C
Sbjct: 916 CEKGGKLLCCESCPASFHPECLNIDM---PEGCWNCNDC 951
Score = 34 (17.0 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 4/7 (57%), Positives = 6/7 (85%)
Query: 120 PKCSCPP 126
P+C+C P
Sbjct: 1095 PRCNCKP 1101
WARNING: HSPs involving 273 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.139 0.484 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 145 145 0.00071 103 3 12 22 0.49 31
30 0.49 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 523
No. of states in DFA: 571 (61 KB)
Total size of DFA: 137 KB (2084 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.16u 0.07s 17.23t Elapsed: 00:00:03
Total cpu time: 17.21u 0.07s 17.28t Elapsed: 00:00:03
Start: Thu Aug 15 11:06:14 2013 End: Thu Aug 15 11:06:17 2013
WARNINGS ISSUED: 2