RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy1461
(189 letters)
>d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 170
Score = 42.3 bits (99), Expect = 5e-06
Identities = 24/147 (16%), Positives = 45/147 (30%), Gaps = 22/147 (14%)
Query: 1 MDLDGDGYLSMYELEYFYDEQLQRMDAIGIECLPFEDCLCQMLDMIKPEVPGKISLQDLK 60
M L+ +G + + + +R++ L D I PE + +
Sbjct: 16 MQLNSEGKIPVKNFFQMFPADRKRVE----AALSACHLPKGKNDAINPEDFPEPVYKSFL 71
Query: 61 RCKMTRIFFDTFFN--------------LEKYLDHEQRDPFASQRDDDTLSSR----MID 102
R D F L K+++ +QRD + +ID
Sbjct: 72 MSLCPRPEIDEIFTSYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQGLID 131
Query: 103 RIFSGTVTRSKHVMTYTEFVWFLLAEE 129
+ + + ++ VWFL E
Sbjct: 132 KYEPSGINAQRGQLSPEGMVWFLCGPE 158
>d1qasa1 a.39.1.7 (A:205-298) Phosphoinositide-specific
phospholipase C, isozyme D1 (PLC-D!) {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 94
Score = 30.2 bits (68), Expect = 0.047
Identities = 13/59 (22%), Positives = 27/59 (45%), Gaps = 4/59 (6%)
Query: 71 TFFNLEKYLDHEQRDPFASQRDDDTLSSRMIDRIFSGTVTRSKHVMTYTEFVWFLLAEE 129
+ L +L H+QR+ L+ +I+R +++ MT F+ +LL+ +
Sbjct: 25 SVERLVTFLQHQQREE----EAGPALALSLIERYEPSETAKAQRQMTKDGFLMYLLSAD 79
>d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica)
[TaxId: 5759]}
Length = 134
Score = 30.1 bits (66), Expect = 0.090
Identities = 15/126 (11%), Positives = 37/126 (29%)
Query: 1 MDLDGDGYLSMYELEYFYDEQLQRMDAIGIECLPFEDCLCQMLDMIKPEVPGKISLQDLK 60
+D++GDG +S E++ F ++ + ++ + ++ + E +
Sbjct: 9 IDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQ 68
Query: 61 RCKMTRIFFDTFFNLEKYLDHEQRDPFASQRDDDTLSSRMIDRIFSGTVTRSKHVMTYTE 120
+I + L + + +T E
Sbjct: 69 DLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQVMKADANGDGYITLEE 128
Query: 121 FVWFLL 126
F+ F L
Sbjct: 129 FLEFSL 134
>d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa
(Obelia longissima), obelin [TaxId: 32570]}
Length = 189
Score = 28.1 bits (61), Expect = 0.49
Identities = 16/162 (9%), Positives = 38/162 (23%), Gaps = 22/162 (13%)
Query: 1 MDLDGDGYLSMYELEYFYDEQLQR----------------------MDAIGIECLPFEDC 38
+D++G+G +++ E+ + + + + F
Sbjct: 23 LDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQF 82
Query: 39 LCQMLDMIKPEVPGKISLQDLKRCKMTRIFFDTFFNLEKYLDHEQRDPFASQRDDDTLSS 98
L + E+ + + FD F + + S
Sbjct: 83 LDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQ 142
Query: 99 RMIDRIFSGTVTRSKHVMTYTEFVWFLLAEEDKTHPRAIEYW 140
+ F + + E L P A +
Sbjct: 143 EDCEATFRHCDLDNAGDLDVDEMTRQHLGFWYTLDPEADGLY 184
>d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD
{Soybean (Glycine max) [TaxId: 3847]}
Length = 182
Score = 27.3 bits (59), Expect = 0.99
Identities = 17/125 (13%), Positives = 36/125 (28%), Gaps = 1/125 (0%)
Query: 1 MDLDGDGYLSMYELEYFYDEQLQRMDAIGIECLPFEDCLCQMLDMIKPEVPGKISLQDLK 60
+D D G ++ EL+ + I+ L + + + E + K
Sbjct: 19 IDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHLN-K 77
Query: 61 RCKMTRIFFDTFFNLEKYLDHEQRDPFASQRDDDTLSSRMIDRIFSGTVTRSKHVMTYTE 120
+ + + + + D D L ID + + + Y E
Sbjct: 78 LEREENLVSAFSYFDKDGSGYITLDEIQQACKDFGLDDIHIDDMIKEIDQDNDGQIDYGE 137
Query: 121 FVWFL 125
F +
Sbjct: 138 FAAMM 142
>d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea
[TaxId: 1836]}
Length = 176
Score = 26.9 bits (58), Expect = 1.3
Identities = 12/100 (12%), Positives = 23/100 (23%), Gaps = 6/100 (6%)
Query: 1 MDLDGDGYLSMYELEYFYDEQLQRMDAIGIECL------PFEDCLCQMLDMIKPEVPGKI 54
D DG+G L + E + F + G +
Sbjct: 16 WDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSL 75
Query: 55 SLQDLKRCKMTRIFFDTFFNLEKYLDHEQRDPFASQRDDD 94
+ + R IF + + L + +
Sbjct: 76 TEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNA 115
>d1wlma1 a.39.1.11 (A:8-145) Protein cgi-38 {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 138
Score = 26.0 bits (57), Expect = 1.9
Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Query: 92 DDDTLSSRMIDRIFSGTVTRSKHVMTYTEFVWFL--LAEE 129
D ++ +D +FS +S V+ Y EF L LA +
Sbjct: 46 DGKAVTGTDVDIVFSKVKAKSARVINYEEFKKALEELATK 85
>d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 165
Score = 25.8 bits (55), Expect = 2.8
Identities = 18/130 (13%), Positives = 40/130 (30%), Gaps = 13/130 (10%)
Query: 1 MDLDGDGYLSMYEL--------EYFYDEQLQRMDAIGIECLPFEDCLCQMLDMIKPEVPG 52
+DLD G LS+ E + D G + F++ + +
Sbjct: 25 LDLDNSGSLSVEEFMSLPELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKE 84
Query: 53 KISLQDLKRCKMTRIFFDTFFNLEKYLDHEQRDPFASQRDDDTLSSRMIDRIFSGTVTRS 112
+ + M + + + L + L + DT +++D+
Sbjct: 85 QKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNL-----KDTQLQQIVDKTIINADKDG 139
Query: 113 KHVMTYTEFV 122
+++ EF
Sbjct: 140 DGRISFEEFC 149
>d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces
pombe) [TaxId: 4896]}
Length = 140
Score = 25.4 bits (54), Expect = 3.1
Identities = 17/127 (13%), Positives = 33/127 (25%), Gaps = 1/127 (0%)
Query: 1 MDLDGDGYLSMYELEYFYDEQLQRMDAIGIECLPFEDCLCQMLDMIKPEVPGKISLQDLK 60
D G G + + Q I + ++ +
Sbjct: 14 FDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIESTLPAEVDMEQFLQVLNRPNGFDMPG 73
Query: 61 RCKMTRIFFDTFFNLEKYLDHEQRDPFASQRDDDTLSSRMIDRIFSGTVTRSKHVMTYTE 120
+ F F + + + LS+ +D + G + V Y +
Sbjct: 74 DPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPVKDGMV-NYHD 132
Query: 121 FVWFLLA 127
FV +LA
Sbjct: 133 FVQMILA 139
>d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB
{Human (Homo sapiens) [TaxId: 9606]}
Length = 180
Score = 25.5 bits (55), Expect = 3.7
Identities = 12/73 (16%), Positives = 27/73 (36%), Gaps = 1/73 (1%)
Query: 1 MDLDGDGYLSMYELEYFYDEQLQRMDAIGIECLPFEDCLCQMLDMIKPEVPGKISLQDLK 60
D D DG L+ +L + + + + + +L+ + G I+L + +
Sbjct: 104 FDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQ 163
Query: 61 R-CKMTRIFFDTF 72
+ F +F
Sbjct: 164 HVISRSPDFASSF 176
>d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus
(Branchiostoma lanceolatum) [TaxId: 7740]}
Length = 68
Score = 23.6 bits (51), Expect = 6.5
Identities = 11/61 (18%), Positives = 22/61 (36%), Gaps = 8/61 (13%)
Query: 1 MDLDGDGYLSMYELEYFYDEQLQRMDAIGIECLPFEDCLCQMLDMIKPEVPGKISLQDLK 60
D +GDG + E + M +G E L + + + + + G I + +
Sbjct: 11 FDANGDGVIDFDEFK-------FIMQKVGEEPLT-DAEVEEAMKEADEDGNGVIDIPEFM 62
Query: 61 R 61
Sbjct: 63 D 63
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.327 0.142 0.440
Gapped
Lambda K H
0.267 0.0576 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 765,293
Number of extensions: 35396
Number of successful extensions: 213
Number of sequences better than 10.0: 1
Number of HSP's gapped: 184
Number of HSP's successfully gapped: 60
Length of query: 189
Length of database: 2,407,596
Length adjustment: 80
Effective length of query: 109
Effective length of database: 1,309,196
Effective search space: 142702364
Effective search space used: 142702364
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 50 (23.4 bits)