BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14616
(174 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9WTM5|RUVB2_MOUSE RuvB-like 2 OS=Mus musculus GN=Ruvbl2 PE=2 SV=3
Length = 463
Score = 202 bits (514), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 104/137 (75%), Positives = 117/137 (85%), Gaps = 15/137 (10%)
Query: 1 MVGQLQARRAAGVVLGMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAG 60
MVGQL ARRAAGVVL MI+EGKIAGRA+L+AGQPGTGKTAIAMG+AQALGPDTPFT++AG
Sbjct: 46 MVGQLAARRAAGVVLEMIREGKIAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAG 105
Query: 61 SEIYSLEMNKTE---------------EETEMIEGEVVEIQIERPATGLGSKVGKLTMKT 105
SEI+SLEM+KTE EETE+IEGEVVEIQI+RPATG GSKVGKLT+KT
Sbjct: 106 SEIFSLEMSKTEALTQAFRRSIGVRIKEETEIIEGEVVEIQIDRPATGTGSKVGKLTLKT 165
Query: 106 TEMETSYDLGAKMIEAI 122
TEMET YDLG KMIE++
Sbjct: 166 TEMETIYDLGTKMIESL 182
Score = 60.5 bits (145), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 32/39 (82%)
Query: 123 GTAYSSPHGIPIDLLDRMVIIPTQPYQDEEIQAILKIRL 161
GT+Y SPHGIPIDLLDR++I+ T PY +++ + IL+IR
Sbjct: 337 GTSYQSPHGIPIDLLDRLLIVSTSPYSEKDTKQILRIRC 375
>sp|Q2TBU9|RUVB2_BOVIN RuvB-like 2 OS=Bos taurus GN=RUVBL2 PE=2 SV=3
Length = 463
Score = 202 bits (514), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 104/137 (75%), Positives = 117/137 (85%), Gaps = 15/137 (10%)
Query: 1 MVGQLQARRAAGVVLGMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAG 60
MVGQL ARRAAGVVL MI+EGKIAGRA+L+AGQPGTGKTAIAMG+AQALGPDTPFT++AG
Sbjct: 46 MVGQLAARRAAGVVLEMIREGKIAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAG 105
Query: 61 SEIYSLEMNKTE---------------EETEMIEGEVVEIQIERPATGLGSKVGKLTMKT 105
SEI+SLEM+KTE EETE+IEGEVVEIQI+RPATG GSKVGKLT+KT
Sbjct: 106 SEIFSLEMSKTEALTQAFRRSIGVRIKEETEIIEGEVVEIQIDRPATGTGSKVGKLTLKT 165
Query: 106 TEMETSYDLGAKMIEAI 122
TEMET YDLG KMIE++
Sbjct: 166 TEMETIYDLGTKMIESL 182
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 32/39 (82%)
Query: 123 GTAYSSPHGIPIDLLDRMVIIPTQPYQDEEIQAILKIRL 161
GT+Y SPHGIPIDLLDR++I+ T PY +++ + IL+IR
Sbjct: 337 GTSYQSPHGIPIDLLDRLLIVSTSPYSEKDKKQILRIRC 375
>sp|Q9Y230|RUVB2_HUMAN RuvB-like 2 OS=Homo sapiens GN=RUVBL2 PE=1 SV=3
Length = 463
Score = 202 bits (514), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 104/137 (75%), Positives = 117/137 (85%), Gaps = 15/137 (10%)
Query: 1 MVGQLQARRAAGVVLGMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAG 60
MVGQL ARRAAGVVL MI+EGKIAGRA+L+AGQPGTGKTAIAMG+AQALGPDTPFT++AG
Sbjct: 46 MVGQLAARRAAGVVLEMIREGKIAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAG 105
Query: 61 SEIYSLEMNKTE---------------EETEMIEGEVVEIQIERPATGLGSKVGKLTMKT 105
SEI+SLEM+KTE EETE+IEGEVVEIQI+RPATG GSKVGKLT+KT
Sbjct: 106 SEIFSLEMSKTEALTQAFRRSIGVRIKEETEIIEGEVVEIQIDRPATGTGSKVGKLTLKT 165
Query: 106 TEMETSYDLGAKMIEAI 122
TEMET YDLG KMIE++
Sbjct: 166 TEMETIYDLGTKMIESL 182
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 32/39 (82%)
Query: 123 GTAYSSPHGIPIDLLDRMVIIPTQPYQDEEIQAILKIRL 161
GT+Y SPHGIPIDLLDR++I+ T PY +++ + IL+IR
Sbjct: 337 GTSYQSPHGIPIDLLDRLLIVSTTPYSEKDTKQILRIRC 375
>sp|Q9DE27|RUVB2_XENLA RuvB-like 2 OS=Xenopus laevis GN=ruvbl2 PE=2 SV=1
Length = 462
Score = 197 bits (500), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 100/137 (72%), Positives = 116/137 (84%), Gaps = 15/137 (10%)
Query: 1 MVGQLQARRAAGVVLGMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAG 60
MVGQL +RRAAGV+L MIKEGKIAGRA+L+AGQPGTGKTAIAMG+AQALG DTPFT++AG
Sbjct: 45 MVGQLASRRAAGVILEMIKEGKIAGRAVLIAGQPGTGKTAIAMGMAQALGSDTPFTAIAG 104
Query: 61 SEIYSLEMNKTE---------------EETEMIEGEVVEIQIERPATGLGSKVGKLTMKT 105
SEI+SLEM+KTE EETE+IEGEVVE+QI+RPATG G+KVGKLT+KT
Sbjct: 105 SEIFSLEMSKTEALTQAFRRSIGVRIKEETEIIEGEVVEVQIDRPATGTGAKVGKLTLKT 164
Query: 106 TEMETSYDLGAKMIEAI 122
TEMET YDLG KMIE++
Sbjct: 165 TEMETIYDLGTKMIESL 181
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/39 (66%), Positives = 31/39 (79%)
Query: 123 GTAYSSPHGIPIDLLDRMVIIPTQPYQDEEIQAILKIRL 161
GT Y SPHGIPIDLLDR++II T PY ++E + ILKIR
Sbjct: 336 GTNYQSPHGIPIDLLDRLLIISTSPYNEKETKQILKIRC 374
>sp|P83571|RUVB2_DANRE RuvB-like 2 OS=Danio rerio GN=ruvbl2 PE=1 SV=1
Length = 463
Score = 195 bits (496), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 98/137 (71%), Positives = 117/137 (85%), Gaps = 15/137 (10%)
Query: 1 MVGQLQARRAAGVVLGMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAG 60
MVGQL +RRAAG++L MIK+G+IAGRA+L+AGQPGTGKTAIAMG+AQ+LGPDTPFT++AG
Sbjct: 46 MVGQLASRRAAGLILEMIKDGQIAGRAVLIAGQPGTGKTAIAMGIAQSLGPDTPFTALAG 105
Query: 61 SEIYSLEMNKTE---------------EETEMIEGEVVEIQIERPATGLGSKVGKLTMKT 105
SEI+SLEM+KTE EETE+IEGEVVEIQI+RPATG G+KVGKLT+KT
Sbjct: 106 SEIFSLEMSKTEALSQAFRKAIGVRIKEETEIIEGEVVEIQIDRPATGTGAKVGKLTLKT 165
Query: 106 TEMETSYDLGAKMIEAI 122
TEMET YDLG KMIE++
Sbjct: 166 TEMETIYDLGTKMIESL 182
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 31/39 (79%)
Query: 123 GTAYSSPHGIPIDLLDRMVIIPTQPYQDEEIQAILKIRL 161
GT Y SPHGIPID+LDR++II T PY ++E + ILKIR
Sbjct: 337 GTNYQSPHGIPIDMLDRLLIIATTPYTEKETRQILKIRC 375
>sp|Q29DI0|RUVB2_DROPS RuvB-like helicase 2 OS=Drosophila pseudoobscura pseudoobscura
GN=rept PE=3 SV=1
Length = 480
Score = 188 bits (478), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 97/137 (70%), Positives = 111/137 (81%), Gaps = 15/137 (10%)
Query: 1 MVGQLQARRAAGVVLGMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAG 60
MVGQ ARRAAGVV+ M++EGKIAGR ILLAG+P TGKTAIA+G+AQALG +TPFTSM+G
Sbjct: 42 MVGQKDARRAAGVVVQMVREGKIAGRCILLAGEPSTGKTAIAVGMAQALGTETPFTSMSG 101
Query: 61 SEIYSLEMNKTE---------------EETEMIEGEVVEIQIERPATGLGSKVGKLTMKT 105
SEIYSLEM+KTE EETE+IEGEVVEIQIERPATG G KVGK+T+KT
Sbjct: 102 SEIYSLEMSKTEALSQALRKSIGVRIKEETEIIEGEVVEIQIERPATGTGQKVGKVTLKT 161
Query: 106 TEMETSYDLGAKMIEAI 122
TEMET+YDLG K+IE
Sbjct: 162 TEMETNYDLGNKIIECF 178
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 36/51 (70%), Gaps = 3/51 (5%)
Query: 123 GTAYSSPHGIPIDLLDRMVIIPTQPYQDEEIQAILKIRLVKNERNEIYNHP 173
GT Y SPHGIPIDLLDRM+II T PY ++E++ ILKIR E + HP
Sbjct: 333 GTNYRSPHGIPIDLLDRMIIIRTVPYSEKEVKEILKIRC---EEEDCVMHP 380
>sp|Q9V3K3|RUVB2_DROME RuvB-like helicase 2 OS=Drosophila melanogaster GN=rept PE=1 SV=1
Length = 481
Score = 187 bits (474), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 96/137 (70%), Positives = 111/137 (81%), Gaps = 15/137 (10%)
Query: 1 MVGQLQARRAAGVVLGMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAG 60
MVGQ ARRAAGVV+ M++EGKIAGR ILLAG+P TGKTAIA+G+AQALG +TPFTSM+G
Sbjct: 42 MVGQKDARRAAGVVVQMVREGKIAGRCILLAGEPSTGKTAIAVGMAQALGTETPFTSMSG 101
Query: 61 SEIYSLEMNKTE---------------EETEMIEGEVVEIQIERPATGLGSKVGKLTMKT 105
SEIYSLEM+KTE EETE+IEGEVVEIQIERPA+G G KVGK+T+KT
Sbjct: 102 SEIYSLEMSKTEALSQALRKSIGVRIKEETEIIEGEVVEIQIERPASGTGQKVGKVTLKT 161
Query: 106 TEMETSYDLGAKMIEAI 122
TEMET+YDLG K+IE
Sbjct: 162 TEMETNYDLGNKIIECF 178
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 36/51 (70%), Gaps = 3/51 (5%)
Query: 123 GTAYSSPHGIPIDLLDRMVIIPTQPYQDEEIQAILKIRLVKNERNEIYNHP 173
GT Y SPHGIPIDLLDRM+II T PY ++E++ ILKIR E + HP
Sbjct: 333 GTNYRSPHGIPIDLLDRMIIIRTVPYSEKEVKEILKIRC---EEEDCIMHP 380
>sp|Q16TA2|RUVB2_AEDAE RuvB-like helicase 2 OS=Aedes aegypti GN=rept PE=3 SV=1
Length = 465
Score = 184 bits (468), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 93/137 (67%), Positives = 111/137 (81%), Gaps = 15/137 (10%)
Query: 1 MVGQLQARRAAGVVLGMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAG 60
MVGQ ARRAAG+V+ +++EGKIAGR ILLAG+P TGKTAIA+G+AQALG +TPFTSM+G
Sbjct: 42 MVGQKDARRAAGLVVQIVREGKIAGRCILLAGEPSTGKTAIAVGMAQALGNETPFTSMSG 101
Query: 61 SEIYSLEMNKTE---------------EETEMIEGEVVEIQIERPATGLGSKVGKLTMKT 105
SEIYSLEMNKTE EETE+IEGEVVEIQI+RPA+G G KVGK+T+KT
Sbjct: 102 SEIYSLEMNKTEALSQALRKSIGVRIKEETEIIEGEVVEIQIDRPASGTGQKVGKVTIKT 161
Query: 106 TEMETSYDLGAKMIEAI 122
T+MET+YDLG K+IE
Sbjct: 162 TDMETNYDLGNKIIECF 178
Score = 63.5 bits (153), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/49 (63%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
Query: 123 GTAYSSPHGIPIDLLDRMVIIPTQPYQDEEIQAILKIRLVKNERNEIYN 171
GT Y SPHGIPIDLLDRM+II T PY +EI+ ILKIR + E +I N
Sbjct: 333 GTNYRSPHGIPIDLLDRMIIIRTVPYSAKEIKEILKIR-CEEEDCQINN 380
>sp|Q54UW5|RUVB2_DICDI RuvB-like helicase 2 OS=Dictyostelium discoideum GN=rvb2 PE=1 SV=1
Length = 469
Score = 175 bits (444), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 90/137 (65%), Positives = 111/137 (81%), Gaps = 15/137 (10%)
Query: 1 MVGQLQARRAAGVVLGMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAG 60
MVGQ+ AR+AAG++L MIKEGKIAGRAIL+ G+PGTGKTAIAMG+AQ+LG TPFT++A
Sbjct: 42 MVGQVGARKAAGLILQMIKEGKIAGRAILIGGEPGTGKTAIAMGMAQSLGEKTPFTAIAA 101
Query: 61 SEIYSLEMNKTE---------------EETEMIEGEVVEIQIERPATGLGSKVGKLTMKT 105
SEI+SLEM+KTE EETE+I GEVV+IQI+RPATG G+KVGKLT+KT
Sbjct: 102 SEIFSLEMSKTEALTQAFRRSIGVRIKEETEVICGEVVDIQIDRPATGSGAKVGKLTLKT 161
Query: 106 TEMETSYDLGAKMIEAI 122
T M+ YDLGAKMI+++
Sbjct: 162 TSMDALYDLGAKMIDSL 178
Score = 40.0 bits (92), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 32/39 (82%)
Query: 123 GTAYSSPHGIPIDLLDRMVIIPTQPYQDEEIQAILKIRL 161
GT Y +PHGIP+DLLDR++II TQPY +++I ILKIR
Sbjct: 333 GTDYKAPHGIPLDLLDRLLIINTQPYTEKDIYKILKIRC 371
>sp|O94692|RUVB2_SCHPO RuvB-like helicase 2 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=rvb2 PE=1 SV=1
Length = 465
Score = 170 bits (430), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 86/137 (62%), Positives = 110/137 (80%), Gaps = 16/137 (11%)
Query: 1 MVGQLQARRAAGVVLGMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAG 60
MVGQ++ARRAAGV+L MI+EG+IAGRAIL+AG P TGKTAIAMG+AQ+LG DTPF +++
Sbjct: 41 MVGQVKARRAAGVILKMIQEGRIAGRAILMAGPPSTGKTAIAMGMAQSLGSDTPFVTLSA 100
Query: 61 SEIYSLEMNKTE---------------EETEMIEGEVVEIQIERPATGLGSKVGKLTMKT 105
SE+YSLEM+KTE EETE+IEGEVVE+QI+R TG G+K GKLT+++
Sbjct: 101 SEVYSLEMSKTEALLQALRKSIGVRIKEETEIIEGEVVEVQIDRSITG-GNKQGKLTIRS 159
Query: 106 TEMETSYDLGAKMIEAI 122
T+MET YDLG KMI+++
Sbjct: 160 TDMETVYDLGTKMIDSL 176
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/39 (69%), Positives = 31/39 (79%)
Query: 123 GTAYSSPHGIPIDLLDRMVIIPTQPYQDEEIQAILKIRL 161
GT Y SPHGIP+DLLDRM+II T PY EE++ ILKIR
Sbjct: 331 GTNYRSPHGIPVDLLDRMLIISTLPYSHEEVKEILKIRC 369
>sp|Q6CT29|RUVB2_KLULA RuvB-like helicase 2 OS=Kluyveromyces lactis (strain ATCC 8585 /
CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)
GN=RVB2 PE=3 SV=1
Length = 467
Score = 168 bits (426), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 88/137 (64%), Positives = 107/137 (78%), Gaps = 16/137 (11%)
Query: 1 MVGQLQARRAAGVVLGMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAG 60
MVGQLQARRAAGV+L M++ G IAGRA+L+AG P TGKTA+AMGL+Q+LG D PFT++AG
Sbjct: 42 MVGQLQARRAAGVILKMVQNGSIAGRAVLVAGPPSTGKTALAMGLSQSLGKDVPFTAIAG 101
Query: 61 SEIYSLEMNKTE---------------EETEMIEGEVVEIQIERPATGLGSKVGKLTMKT 105
SEI+SLE++KTE EETE+IEGEVVEIQI+R TG G K GKLT+KT
Sbjct: 102 SEIFSLELSKTEALTQAFRKSIGIKIKEETELIEGEVVEIQIDRSITG-GHKQGKLTIKT 160
Query: 106 TEMETSYDLGAKMIEAI 122
T+MET Y+LG KMIE +
Sbjct: 161 TDMETIYELGNKMIEGL 177
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 30/43 (69%)
Query: 123 GTAYSSPHGIPIDLLDRMVIIPTQPYQDEEIQAILKIRLVKNE 165
GT Y SPHG+P+DLLDR +II T+ Y EI+ IL IR + E
Sbjct: 332 GTNYKSPHGLPLDLLDRSIIITTKNYDASEIKTILTIRSTEEE 374
>sp|Q755G5|RUVB2_ASHGO RuvB-like helicase 2 OS=Ashbya gossypii (strain ATCC 10895 / CBS
109.51 / FGSC 9923 / NRRL Y-1056) GN=RVB2 PE=3 SV=2
Length = 469
Score = 167 bits (424), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 87/137 (63%), Positives = 107/137 (78%), Gaps = 16/137 (11%)
Query: 1 MVGQLQARRAAGVVLGMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAG 60
MVGQLQARRAAGV+L M++ G IAGRA+L+AG P TGKTA+AMGL+Q+LG D PFT+MAG
Sbjct: 43 MVGQLQARRAAGVILKMVQNGTIAGRAVLVAGPPSTGKTALAMGLSQSLGADVPFTAMAG 102
Query: 61 SEIYSLEMNKTE---------------EETEMIEGEVVEIQIERPATGLGSKVGKLTMKT 105
SEI+SLE++KTE E+TE+IEGEVVEIQI+R TG G K GKLT+KT
Sbjct: 103 SEIFSLELSKTEALTQAFRKSIGVKIKEDTELIEGEVVEIQIDRSITG-GHKQGKLTIKT 161
Query: 106 TEMETSYDLGAKMIEAI 122
T+MET Y+LG KMI+ +
Sbjct: 162 TDMETIYELGNKMIDGL 178
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 30/38 (78%)
Query: 123 GTAYSSPHGIPIDLLDRMVIIPTQPYQDEEIQAILKIR 160
GT Y SPHG+P+DLLDR +II TQ Y ++EI+ IL IR
Sbjct: 333 GTNYKSPHGLPLDLLDRSIIITTQNYSEQEIKTILSIR 370
>sp|Q6C3X6|RUVB2_YARLI RuvB-like helicase 2 OS=Yarrowia lipolytica (strain CLIB 122 / E
150) GN=RVB2 PE=3 SV=2
Length = 466
Score = 167 bits (424), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 88/139 (63%), Positives = 108/139 (77%), Gaps = 16/139 (11%)
Query: 1 MVGQLQARRAAGVVLGMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAG 60
MVGQ++ARRAA VVL MIK+GKIAGR++LLAG P TGKTAIAMG++Q+LG D PFTS+AG
Sbjct: 43 MVGQVKARRAAAVVLQMIKDGKIAGRSVLLAGPPSTGKTAIAMGISQSLGSDVPFTSLAG 102
Query: 61 SEIYSLEMNKTE---------------EETEMIEGEVVEIQIERPATGLGSKVGKLTMKT 105
SEIYSLE++KTE E T++IEGEVVEIQI+R +G G K GKLT+KT
Sbjct: 103 SEIYSLELSKTEALNQAFRKSIGVRIKETTDIIEGEVVEIQIDRSLSG-GHKQGKLTIKT 161
Query: 106 TEMETSYDLGAKMIEAIGT 124
T+MET YDLG KMI+++
Sbjct: 162 TDMETIYDLGHKMIDSLSN 180
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 32/38 (84%)
Query: 123 GTAYSSPHGIPIDLLDRMVIIPTQPYQDEEIQAILKIR 160
GT Y SPHG+P+DLLDR++IIPT PY +E++ IL+IR
Sbjct: 333 GTDYKSPHGLPVDLLDRVIIIPTSPYSPDEVKQILQIR 370
>sp|Q6FSF1|RUVB2_CANGA RuvB-like helicase 2 OS=Candida glabrata (strain ATCC 2001 / CBS
138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=RVB2 PE=3
SV=1
Length = 476
Score = 166 bits (419), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 88/137 (64%), Positives = 106/137 (77%), Gaps = 16/137 (11%)
Query: 1 MVGQLQARRAAGVVLGMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAG 60
MVGQLQARRAAGV+L MI+ G IAGRAIL+AG P TGKTA+AMGL+Q+LG D PFT++ G
Sbjct: 45 MVGQLQARRAAGVILRMIQNGSIAGRAILVAGPPSTGKTALAMGLSQSLGKDVPFTAITG 104
Query: 61 SEIYSLEMNKTE---------------EETEMIEGEVVEIQIERPATGLGSKVGKLTMKT 105
SEI+SLE++KTE EETE+IEGEVVEIQI+R TG G K GKLT+KT
Sbjct: 105 SEIFSLELSKTEALTQAFRKSIGIKIKEETELIEGEVVEIQIDRSITG-GHKQGKLTIKT 163
Query: 106 TEMETSYDLGAKMIEAI 122
T+MET Y+LG KMI+ +
Sbjct: 164 TDMETIYELGNKMIDGL 180
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 29/38 (76%)
Query: 123 GTAYSSPHGIPIDLLDRMVIIPTQPYQDEEIQAILKIR 160
GT Y SPHG+P+DLLDR +II T Y +EEI+ IL IR
Sbjct: 335 GTNYKSPHGLPLDLLDRSIIITTSNYNEEEIKTILTIR 372
>sp|Q6BSB8|RUVB2_DEBHA RuvB-like helicase 2 OS=Debaryomyces hansenii (strain ATCC 36239 /
CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=RVB2 PE=3
SV=1
Length = 480
Score = 166 bits (419), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 89/137 (64%), Positives = 107/137 (78%), Gaps = 16/137 (11%)
Query: 1 MVGQLQARRAAGVVLGMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAG 60
MVGQL+AR+AAGV+L MI+ GKIAGRA+L+AG P TGKTAIAMGL+Q LG + PFT++AG
Sbjct: 45 MVGQLKARKAAGVILKMIQAGKIAGRAVLVAGPPSTGKTAIAMGLSQNLGSEVPFTAIAG 104
Query: 61 SEIYSLEMNKTE---------------EETEMIEGEVVEIQIERPATGLGSKVGKLTMKT 105
SEI+SLE++KTE EETEMIEGEVVEIQI+R TG G K GKLT+KT
Sbjct: 105 SEIFSLELSKTESLTQAFRKSIGIKIKEETEMIEGEVVEIQIDRSITG-GHKQGKLTIKT 163
Query: 106 TEMETSYDLGAKMIEAI 122
T+MET Y+LG KMIE +
Sbjct: 164 TDMETIYELGNKMIEGL 180
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 31/43 (72%)
Query: 123 GTAYSSPHGIPIDLLDRMVIIPTQPYQDEEIQAILKIRLVKNE 165
GT Y SPHG+P+DLLDR +II T PY +EI+ IL IR + E
Sbjct: 335 GTNYKSPHGLPMDLLDRSIIIHTAPYNADEIRTILLIRATEEE 377
>sp|Q12464|RUVB2_YEAST RuvB-like protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508
/ S288c) GN=RVB2 PE=1 SV=1
Length = 471
Score = 166 bits (419), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 86/137 (62%), Positives = 107/137 (78%), Gaps = 16/137 (11%)
Query: 1 MVGQLQARRAAGVVLGMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAG 60
MVGQLQARRAAGV+L M++ G IAGRA+L+AG P TGKTA+AMG++Q+LG D PFT++AG
Sbjct: 44 MVGQLQARRAAGVILKMVQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAG 103
Query: 61 SEIYSLEMNKTE---------------EETEMIEGEVVEIQIERPATGLGSKVGKLTMKT 105
SEI+SLE++KTE EETE+IEGEVVEIQI+R TG G K GKLT+KT
Sbjct: 104 SEIFSLELSKTEALTQAFRKSIGIKIKEETELIEGEVVEIQIDRSITG-GHKQGKLTIKT 162
Query: 106 TEMETSYDLGAKMIEAI 122
T+MET Y+LG KMI+ +
Sbjct: 163 TDMETIYELGNKMIDGL 179
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 30/38 (78%)
Query: 123 GTAYSSPHGIPIDLLDRMVIIPTQPYQDEEIQAILKIR 160
GT Y SPHG+P+DLLDR +II T+ Y ++EI+ IL IR
Sbjct: 334 GTNYKSPHGLPLDLLDRSIIITTKSYNEQEIKTILSIR 371
>sp|Q5BGK3|RUVB2_EMENI RuvB-like helicase 2 OS=Emericella nidulans (strain FGSC A4 / ATCC
38163 / CBS 112.46 / NRRL 194 / M139) GN=rvb2 PE=3 SV=2
Length = 468
Score = 165 bits (418), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/137 (62%), Positives = 108/137 (78%), Gaps = 16/137 (11%)
Query: 1 MVGQLQARRAAGVVLGMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAG 60
+VGQ +AR+AA V+L M+KEGKIAGRA+L+AG P TGKTAIAMG+AQ+LGPD PFT +A
Sbjct: 45 LVGQEKARKAAAVILQMVKEGKIAGRAVLIAGPPSTGKTAIAMGMAQSLGPDVPFTMLAA 104
Query: 61 SEIYSLEMNKTE---------------EETEMIEGEVVEIQIERPATGLGSKVGKLTMKT 105
SEI+S+EM+KTE EE+E+IEGEVVEIQI+R TG G+K GKLT+KT
Sbjct: 105 SEIFSMEMSKTEALTQAFRKSIGVRIKEESEIIEGEVVEIQIDRSVTG-GNKQGKLTIKT 163
Query: 106 TEMETSYDLGAKMIEAI 122
T+MET YD+G KMI+++
Sbjct: 164 TDMETIYDMGTKMIDSM 180
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 30/38 (78%)
Query: 123 GTAYSSPHGIPIDLLDRMVIIPTQPYQDEEIQAILKIR 160
GT Y+SPHG+P+D LDR+VI+ TQ Y +EI+ IL IR
Sbjct: 335 GTTYNSPHGLPLDFLDRVVIVSTQHYSADEIRQILAIR 372
>sp|Q4I948|RUVB2_GIBZE RuvB-like helicase 2 OS=Gibberella zeae (strain PH-1 / ATCC
MYA-4620 / FGSC 9075 / NRRL 31084) GN=RVB2 PE=3 SV=2
Length = 473
Score = 164 bits (414), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 85/137 (62%), Positives = 108/137 (78%), Gaps = 16/137 (11%)
Query: 1 MVGQLQARRAAGVVLGMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAG 60
+VGQ +AR+AA V+L MIKEGKIAGRA+L+AG P TGKTAIAMG+AQ+LGPD PFT++A
Sbjct: 45 LVGQEKARKAAAVMLQMIKEGKIAGRAVLIAGPPSTGKTAIAMGMAQSLGPDVPFTTLAS 104
Query: 61 SEIYSLEMNKTE---------------EETEMIEGEVVEIQIERPATGLGSKVGKLTMKT 105
SEI+SLEM+KTE EE+E++EGEVVEIQI+R TG +K GKLT+KT
Sbjct: 105 SEIFSLEMSKTEALTQAFRKSIGVRIKEESEIMEGEVVEIQIDRSVTG-SAKQGKLTIKT 163
Query: 106 TEMETSYDLGAKMIEAI 122
T+ME YD+G+KMI+A+
Sbjct: 164 TDMEAVYDMGSKMIDAM 180
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 123 GTAYSSPHGIPIDLLDRMVIIPTQPYQDEEIQAILKIRLVKNERNEIYNHP 173
GT Y SPHG+P+D LDR+ II T Y EEI+ I+ IR + E+ HP
Sbjct: 335 GTDYRSPHGLPLDFLDRVAIINTHSYTPEEIKQIISIRA---QEEEVDVHP 382
>sp|Q4WKH9|RUVB2_ASPFU RuvB-like helicase 2 OS=Neosartorya fumigata (strain ATCC MYA-4609
/ Af293 / CBS 101355 / FGSC A1100) GN=rvb2 PE=3 SV=1
Length = 469
Score = 161 bits (408), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 83/137 (60%), Positives = 107/137 (78%), Gaps = 16/137 (11%)
Query: 1 MVGQLQARRAAGVVLGMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAG 60
+VGQ +AR+AA V+L M+KEGKIAGRA+L+AG P TGKTAIAMG+AQ+LG D PFT +A
Sbjct: 45 LVGQEKARKAAAVILQMVKEGKIAGRAVLIAGPPSTGKTAIAMGMAQSLGSDVPFTMLAA 104
Query: 61 SEIYSLEMNKTE---------------EETEMIEGEVVEIQIERPATGLGSKVGKLTMKT 105
SEI+S+EM+KTE EE+E+IEGEVVEIQ++R TG G+K GKLT+KT
Sbjct: 105 SEIFSMEMSKTEALTQAFRKSIGVRIKEESEIIEGEVVEIQVDRSVTG-GNKQGKLTIKT 163
Query: 106 TEMETSYDLGAKMIEAI 122
T+MET YD+G KMI+++
Sbjct: 164 TDMETIYDMGTKMIDSM 180
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 33/43 (76%)
Query: 123 GTAYSSPHGIPIDLLDRMVIIPTQPYQDEEIQAILKIRLVKNE 165
GT Y+SPHG+P+D LDR+VI+ TQPY +EI+ IL IR + E
Sbjct: 335 GTTYTSPHGLPLDFLDRVVIVSTQPYSGDEIRQILAIRAQEEE 377
>sp|Q5AGZ9|RUVB2_CANAL RuvB-like helicase 2 OS=Candida albicans (strain SC5314 / ATCC
MYA-2876) GN=RVB2 PE=3 SV=1
Length = 498
Score = 159 bits (403), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 85/137 (62%), Positives = 105/137 (76%), Gaps = 16/137 (11%)
Query: 1 MVGQLQARRAAGVVLGMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAG 60
MVGQL AR+AAGV+L M++ GKIAGRA+L+AG P TGKTAIAMGL+Q+LG PFT++A
Sbjct: 48 MVGQLSARKAAGVILKMVEAGKIAGRAVLIAGPPSTGKTAIAMGLSQSLGNQVPFTALAA 107
Query: 61 SEIYSLEMNKTE---------------EETEMIEGEVVEIQIERPATGLGSKVGKLTMKT 105
SE++SLE++KTE EETE+IEGEVVEIQI+R TG G K GKLT+KT
Sbjct: 108 SEVFSLELSKTEALTQAFRKSIGIKIKEETEIIEGEVVEIQIDRTITG-GHKQGKLTIKT 166
Query: 106 TEMETSYDLGAKMIEAI 122
T+MET Y+LG KMIE +
Sbjct: 167 TDMETIYELGNKMIEGL 183
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 29/43 (67%)
Query: 123 GTAYSSPHGIPIDLLDRMVIIPTQPYQDEEIQAILKIRLVKNE 165
GT Y SPHG+P+DLLDR + I T Y +EI+ IL IR + E
Sbjct: 338 GTDYKSPHGMPMDLLDRSITIHTTSYTADEIRTILSIRATEEE 380
>sp|Q873C7|RUVB2_NEUCR RuvB-like helicase 2 OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=rvb-2
PE=3 SV=1
Length = 481
Score = 159 bits (402), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 84/137 (61%), Positives = 107/137 (78%), Gaps = 16/137 (11%)
Query: 1 MVGQLQARRAAGVVLGMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAG 60
+VGQ +AR+AA VVL MIK+GKIAGRA+L+AG P TGKTA+AMG+AQ+LG D PFT++A
Sbjct: 45 LVGQEKARKAAAVVLEMIKQGKIAGRAVLIAGPPSTGKTALAMGMAQSLGTDVPFTTLAA 104
Query: 61 SEIYSLEMNKTE---------------EETEMIEGEVVEIQIERPATGLGSKVGKLTMKT 105
SEIYSLEM+KTE EE+E++EGEVVEIQI+R TG +K GKLT+KT
Sbjct: 105 SEIYSLEMSKTEALTQAFRKSIGVRIKEESEIMEGEVVEIQIDRSVTG-HAKQGKLTIKT 163
Query: 106 TEMETSYDLGAKMIEAI 122
T+ME YD+G+KMI+A+
Sbjct: 164 TDMEAIYDMGSKMIDAM 180
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 29/43 (67%)
Query: 123 GTAYSSPHGIPIDLLDRMVIIPTQPYQDEEIQAILKIRLVKNE 165
GT Y SPHG+P+D LDR+ II T Y +E++ IL IR + E
Sbjct: 335 GTDYKSPHGLPLDFLDRISIINTHSYTPDELRQILTIRAQEEE 377
>sp|P0CR28|RUVB2_CRYNJ RuvB-like helicase 2 OS=Cryptococcus neoformans var. neoformans
serotype D (strain JEC21 / ATCC MYA-565) GN=RVB2 PE=3
SV=1
Length = 463
Score = 152 bits (385), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 77/137 (56%), Positives = 102/137 (74%), Gaps = 16/137 (11%)
Query: 1 MVGQLQARRAAGVVLGMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAG 60
M+GQ +AR+AAGV+L M++EG+IAGRAIL+AG P TGKTA+AM + Q LG D PF +
Sbjct: 45 MIGQGKARKAAGVILKMVQEGRIAGRAILMAGPPSTGKTALAMAMTQTLGSDVPFVMLTA 104
Query: 61 SEIYSLEMNKTE---------------EETEMIEGEVVEIQIERPATGLGSKVGKLTMKT 105
SE++SLE++KTE EETE+IEGEVVEIQ++R TG +K G+LT+KT
Sbjct: 105 SEVFSLEISKTESLTQAFRRAIGVRIKEETELIEGEVVEIQVDRSVTG-ATKTGRLTLKT 163
Query: 106 TEMETSYDLGAKMIEAI 122
T+MET YDLG+KMI+ +
Sbjct: 164 TDMETVYDLGSKMIDQL 180
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 31/38 (81%)
Query: 123 GTAYSSPHGIPIDLLDRMVIIPTQPYQDEEIQAILKIR 160
GT Y SPHGIP DLLDRM+II T Y+++E++ I+KIR
Sbjct: 335 GTKYKSPHGIPADLLDRMLIISTNRYEEDEMREIVKIR 372
>sp|P0CR29|RUVB2_CRYNB RuvB-like helicase 2 OS=Cryptococcus neoformans var. neoformans
serotype D (strain B-3501A) GN=RVB2 PE=3 SV=1
Length = 463
Score = 152 bits (385), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 77/137 (56%), Positives = 102/137 (74%), Gaps = 16/137 (11%)
Query: 1 MVGQLQARRAAGVVLGMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAG 60
M+GQ +AR+AAGV+L M++EG+IAGRAIL+AG P TGKTA+AM + Q LG D PF +
Sbjct: 45 MIGQGKARKAAGVILKMVQEGRIAGRAILMAGPPSTGKTALAMAMTQTLGSDVPFVMLTA 104
Query: 61 SEIYSLEMNKTE---------------EETEMIEGEVVEIQIERPATGLGSKVGKLTMKT 105
SE++SLE++KTE EETE+IEGEVVEIQ++R TG +K G+LT+KT
Sbjct: 105 SEVFSLEISKTESLTQAFRRAIGVRIKEETELIEGEVVEIQVDRSVTG-ATKTGRLTLKT 163
Query: 106 TEMETSYDLGAKMIEAI 122
T+MET YDLG+KMI+ +
Sbjct: 164 TDMETVYDLGSKMIDQL 180
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 31/38 (81%)
Query: 123 GTAYSSPHGIPIDLLDRMVIIPTQPYQDEEIQAILKIR 160
GT Y SPHGIP DLLDRM+II T Y+++E++ I+KIR
Sbjct: 335 GTKYKSPHGIPADLLDRMLIISTNRYEEDEMREIVKIR 372
>sp|Q4P6N7|RUVB2_USTMA RuvB-like helicase 2 OS=Ustilago maydis (strain 521 / FGSC 9021)
GN=RVB2 PE=3 SV=1
Length = 476
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/137 (51%), Positives = 96/137 (70%), Gaps = 16/137 (11%)
Query: 1 MVGQLQARRAAGVVLGMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAG 60
MVGQ AR+AAG+++ M+++G+IAGRAIL+ G P TGKTAIAMG+AQ LG D PFT ++
Sbjct: 42 MVGQRAARKAAGLIVKMVQDGRIAGRAILMVGPPSTGKTAIAMGMAQTLGSDVPFTMLSA 101
Query: 61 SEIYSLEMNKTEEETEMIEGEV---------------VEIQIERPATGLGSKVGKLTMKT 105
SE++SLEM+KTE + + VEIQI+R TG +K GKLT+KT
Sbjct: 102 SEVFSLEMSKTEALMQAFRRSIGVRIREEAEVVEGEVVEIQIDRSLTG-ATKTGKLTIKT 160
Query: 106 TEMETSYDLGAKMIEAI 122
T+MET Y+LG KMI+++
Sbjct: 161 TDMETIYELGNKMIDSL 177
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 33/43 (76%)
Query: 123 GTAYSSPHGIPIDLLDRMVIIPTQPYQDEEIQAILKIRLVKNE 165
GT + SPHGIPIDLLDR++II T+PY+ +++ IL IR + E
Sbjct: 332 GTRFRSPHGIPIDLLDRVLIISTKPYELADLKQILTIRAAEEE 374
>sp|Q29AK9|RUVB1_DROPS RuvB-like helicase 1 OS=Drosophila pseudoobscura pseudoobscura
GN=pont PE=3 SV=1
Length = 456
Score = 97.4 bits (241), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 80/142 (56%), Gaps = 20/142 (14%)
Query: 1 MVGQLQARRAAGVVLGMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAG 60
+VGQ AR AAG+V+ +IK K+AGRA+LLAG PGTGKTAIA+ +AQ LG PF M G
Sbjct: 39 LVGQKAAREAAGIVVDLIKSKKMAGRALLLAGPPGTGKTAIALAIAQELGNKVPFCPMVG 98
Query: 61 SEIYSLEMNKTE---------------EETEMIEGEVVE---IQIERPATGLGSKVGKLT 102
SE++S E+ KTE E E+ EGEV E ++ E P G G + +
Sbjct: 99 SEVFSNEIKKTEVLMENFRRSIGLRIRETKEVYEGEVTELTPVETENPMGGYGKTISNVV 158
Query: 103 --MKTTEMETSYDLGAKMIEAI 122
+KT + L + +A+
Sbjct: 159 IGLKTAKGTKQLKLDPSIFDAL 180
>sp|Q9VH07|RUVB1_DROME RuvB-like helicase 1 OS=Drosophila melanogaster GN=pont PE=1 SV=1
Length = 456
Score = 97.1 bits (240), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 80/142 (56%), Gaps = 20/142 (14%)
Query: 1 MVGQLQARRAAGVVLGMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAG 60
+VGQ AR AAG+V+ +IK K+AGRA+LLAG PGTGKTAIA+ +AQ LG PF M G
Sbjct: 39 LVGQKAAREAAGIVVDLIKSKKMAGRALLLAGPPGTGKTAIALAIAQELGNKVPFCPMVG 98
Query: 61 SEIYSLEMNKTE---------------EETEMIEGEVVE---IQIERPATGLGSKVGKLT 102
SE++S E+ KTE E E+ EGEV E ++ E P G G + +
Sbjct: 99 SEVFSNEIKKTEVLMENFRRSIGLRIRETKEVYEGEVTELTPVETENPMGGYGKTISNVV 158
Query: 103 --MKTTEMETSYDLGAKMIEAI 122
+KT + L + +A+
Sbjct: 159 IGLKTAKGTKQLKLDPSIFDAL 180
>sp|Q0IFL2|RUVB1_AEDAE RuvB-like helicase 1 OS=Aedes aegypti GN=pont PE=3 SV=1
Length = 456
Score = 96.7 bits (239), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 72/121 (59%), Gaps = 18/121 (14%)
Query: 1 MVGQLQARRAAGVVLGMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAG 60
+VGQ AR AAG+V+ +IK K++GRA+LLAG PGTGKTAIA+ +AQ LG PF M G
Sbjct: 39 LVGQKDAREAAGIVVDLIKSKKMSGRALLLAGPPGTGKTAIALAIAQELGNKVPFCPMVG 98
Query: 61 SEIYSLEMNKTE---------------EETEMIEGEVVE---IQIERPATGLGSKVGKLT 102
SE++S E+ KTE E E+ EGEV E ++ E P G G + +
Sbjct: 99 SEVFSSEIKKTEVLMENFRRSIGLRIRETKEVYEGEVTELTPVETENPMGGYGKTISNVV 158
Query: 103 M 103
+
Sbjct: 159 I 159
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 27/33 (81%)
Query: 128 SPHGIPIDLLDRMVIIPTQPYQDEEIQAILKIR 160
SPHGIP+DLLDR++I+ T PY EI+ I+K+R
Sbjct: 346 SPHGIPLDLLDRLLIVRTAPYNLSEIEQIIKLR 378
>sp|P60123|RUVB1_RAT RuvB-like 1 OS=Rattus norvegicus GN=Ruvbl1 PE=1 SV=1
Length = 456
Score = 96.3 bits (238), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 54/119 (45%), Positives = 70/119 (58%), Gaps = 18/119 (15%)
Query: 1 MVGQLQARRAAGVVLGMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAG 60
+VGQ AR A GV++ +IK K+AGRA+LLAG PGTGKTA+A+ +AQ LG PF M G
Sbjct: 39 LVGQENAREACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVG 98
Query: 61 SEIYSLEMNKTE---------------EETEMIEGEVVEI---QIERPATGLGSKVGKL 101
SE+YS E+ KTE E E+ EGEV E+ + E P G G + +
Sbjct: 99 SEVYSTEIKKTEVLMENFRRAIGLRIKETKEVYEGEVTELTPCETENPMGGYGKTISHV 157
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 28/34 (82%)
Query: 127 SSPHGIPIDLLDRMVIIPTQPYQDEEIQAILKIR 160
+SPHGIP+DLLDR++II T Y +E++ I+KIR
Sbjct: 345 TSPHGIPLDLLDRVMIIRTMLYTPQEMKQIIKIR 378
>sp|P60122|RUVB1_MOUSE RuvB-like 1 OS=Mus musculus GN=Ruvbl1 PE=1 SV=1
Length = 456
Score = 96.3 bits (238), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 54/119 (45%), Positives = 70/119 (58%), Gaps = 18/119 (15%)
Query: 1 MVGQLQARRAAGVVLGMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAG 60
+VGQ AR A GV++ +IK K+AGRA+LLAG PGTGKTA+A+ +AQ LG PF M G
Sbjct: 39 LVGQENAREACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVG 98
Query: 61 SEIYSLEMNKTE---------------EETEMIEGEVVEI---QIERPATGLGSKVGKL 101
SE+YS E+ KTE E E+ EGEV E+ + E P G G + +
Sbjct: 99 SEVYSTEIKKTEVLMENFRRAIGLRIKETKEVYEGEVTELTPCETENPMGGYGKTISHV 157
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 28/34 (82%)
Query: 127 SSPHGIPIDLLDRMVIIPTQPYQDEEIQAILKIR 160
+SPHGIP+DLLDR++II T Y +E++ I+KIR
Sbjct: 345 TSPHGIPLDLLDRVMIIRTMLYTPQEMKQIIKIR 378
>sp|Q9Y265|RUVB1_HUMAN RuvB-like 1 OS=Homo sapiens GN=RUVBL1 PE=1 SV=1
Length = 456
Score = 96.3 bits (238), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 71/121 (58%), Gaps = 18/121 (14%)
Query: 1 MVGQLQARRAAGVVLGMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAG 60
+VGQ AR A GV++ +IK K+AGRA+LLAG PGTGKTA+A+ +AQ LG PF M G
Sbjct: 39 LVGQENAREACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVG 98
Query: 61 SEIYSLEMNKTE---------------EETEMIEGEVVEI---QIERPATGLGSKVGKLT 102
SE+YS E+ KTE E E+ EGEV E+ + E P G G + +
Sbjct: 99 SEVYSTEIKKTEVLMENFRRAIGLRIKETKEVYEGEVTELTPCETENPMGGYGKTISHVI 158
Query: 103 M 103
+
Sbjct: 159 I 159
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 28/34 (82%)
Query: 127 SSPHGIPIDLLDRMVIIPTQPYQDEEIQAILKIR 160
+SPHGIP+DLLDR++II T Y +E++ I+KIR
Sbjct: 345 TSPHGIPLDLLDRVMIIRTMLYTPQEMKQIIKIR 378
>sp|Q9DE26|RUVB1_XENLA RuvB-like 1 OS=Xenopus laevis GN=ruvbl1 PE=2 SV=1
Length = 456
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/121 (44%), Positives = 71/121 (58%), Gaps = 18/121 (14%)
Query: 1 MVGQLQARRAAGVVLGMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAG 60
+VGQ AR A GV++ +IK K+AGRA+LLAG PGTGKTA+A+ +AQ LG PF M G
Sbjct: 39 LVGQENAREACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGNKVPFCPMVG 98
Query: 61 SEIYSLEMNKTE---------------EETEMIEGEVVEI---QIERPATGLGSKVGKLT 102
SE+YS E+ KTE E E+ EGEV E+ + E P G G + +
Sbjct: 99 SEVYSTEIKKTEVLMENFRRAIGLRIRETKEVYEGEVTELTPCETENPMGGYGKTISHVI 158
Query: 103 M 103
+
Sbjct: 159 I 159
Score = 47.0 bits (110), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 28/34 (82%)
Query: 127 SSPHGIPIDLLDRMVIIPTQPYQDEEIQAILKIR 160
+SPHGIP+DLLDR++II T Y +E++ I+KIR
Sbjct: 345 ASPHGIPLDLLDRVMIIRTMLYTPQEMKQIIKIR 378
>sp|Q03940|RUVB1_YEAST RuvB-like protein 1 OS=Saccharomyces cerevisiae (strain ATCC 204508
/ S288c) GN=RVB1 PE=1 SV=1
Length = 463
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 71/119 (59%), Gaps = 18/119 (15%)
Query: 1 MVGQLQARRAAGVVLGMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAG 60
VGQ++AR A GV++ +IK K++GRAILLAG P TGKTA+A+ ++Q LGP PF + G
Sbjct: 48 FVGQIEAREACGVIVDLIKAKKMSGRAILLAGGPSTGKTALALAISQELGPKVPFCPLVG 107
Query: 61 SEIYSLEMNKTE---------------EETEMIEGEVVEI---QIERPATGLGSKVGKL 101
SE+YS+E+ KTE E E+ EGEV E+ E P G G + +
Sbjct: 108 SELYSVEVKKTETLMENFRRAIGLRIKETKEVYEGEVTELTPEDAENPLGGYGKTISHV 166
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 26/33 (78%)
Query: 128 SPHGIPIDLLDRMVIIPTQPYQDEEIQAILKIR 160
SPHG+P DL+DR++I+ T PY +EI+ I++ R
Sbjct: 355 SPHGVPPDLIDRLLIVRTLPYDKDEIRTIIERR 387
>sp|Q6FU78|RUVB1_CANGA RuvB-like helicase 1 OS=Candida glabrata (strain ATCC 2001 / CBS
138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=RVB1 PE=3
SV=1
Length = 457
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/119 (43%), Positives = 71/119 (59%), Gaps = 18/119 (15%)
Query: 1 MVGQLQARRAAGVVLGMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAG 60
VGQ++AR A GV++ +IK K++GRAILLAG P TGKTA+A+ ++Q LGP PF + G
Sbjct: 42 FVGQVEAREACGVIVDLIKAKKMSGRAILLAGGPSTGKTALALAISQELGPKVPFCPLVG 101
Query: 61 SEIYSLEMNKTE---------------EETEMIEGEVVEI---QIERPATGLGSKVGKL 101
SE+YS+E+ KTE E E+ EGEV E+ E P G G + +
Sbjct: 102 SELYSVEVKKTETLMENFRRAIGLRIKETKEVYEGEVTELTPEDAENPLGGYGKTISHV 160
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 26/33 (78%)
Query: 128 SPHGIPIDLLDRMVIIPTQPYQDEEIQAILKIR 160
SPHGIP DL+DR++I+ T PY +EI+ I++ R
Sbjct: 349 SPHGIPADLIDRLLIVRTLPYNKDEIRLIIERR 381
>sp|Q5BBV9|RUVB1_EMENI RuvB-like helicase 1 OS=Emericella nidulans (strain FGSC A4 / ATCC
38163 / CBS 112.46 / NRRL 194 / M139) GN=rvb1 PE=3 SV=3
Length = 458
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 78/142 (54%), Gaps = 20/142 (14%)
Query: 1 MVGQLQARRAAGVVLGMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAG 60
VGQ AR A GVV+ +IK K+AGRA+LLAG PGTGKTA+A+ ++Q LG PF + G
Sbjct: 40 WVGQAAAREACGVVVDLIKAKKMAGRAVLLAGGPGTGKTALALAVSQELGTKVPFCPIVG 99
Query: 61 SEIYSLEMNKTE---------------EETEMIEGEVVEI---QIERPATGLGSKVGKLT 102
SEIYS E+ KTE E E+ EGEV E+ + E P G G + L
Sbjct: 100 SEIYSAEVKKTEALMENFRRAIGLRVRETKEVYEGEVTELTPQEAENPLGGYGRTISHLI 159
Query: 103 --MKTTEMETSYDLGAKMIEAI 122
+K+ + L + EAI
Sbjct: 160 IGLKSAKGTKKLRLDPSIYEAI 181
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 27/34 (79%)
Query: 127 SSPHGIPIDLLDRMVIIPTQPYQDEEIQAILKIR 160
S+ HGIP DLL R++IIPT PY +EI+ I+++R
Sbjct: 346 SAAHGIPPDLLARLLIIPTHPYSPDEIKTIIRLR 379
>sp|Q4WPW8|RUVB1_ASPFU RuvB-like helicase 1 OS=Neosartorya fumigata (strain ATCC MYA-4609
/ Af293 / CBS 101355 / FGSC A1100) GN=rvb1 PE=3 SV=1
Length = 458
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 78/142 (54%), Gaps = 20/142 (14%)
Query: 1 MVGQLQARRAAGVVLGMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAG 60
VGQ AR A GVV+ +IK K+AGRAI+LAG PGTGKTA+A+ ++Q LG PF + G
Sbjct: 40 FVGQAAAREACGVVVDLIKAKKMAGRAIMLAGGPGTGKTALALAVSQELGTKVPFCPIVG 99
Query: 61 SEIYSLEMNKTE---------------EETEMIEGEVVEI---QIERPATGLGSKVGKLT 102
SEIYS E+ KTE E E+ EGEV E+ + E P G G + L
Sbjct: 100 SEIYSAEVKKTEALMENFRRAIGLRVRETKEVYEGEVTELTPEEAENPLGGYGRTISHLI 159
Query: 103 --MKTTEMETSYDLGAKMIEAI 122
+K+ + L + EAI
Sbjct: 160 IGLKSAKGTKKLRLDPSIYEAI 181
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 27/34 (79%)
Query: 127 SSPHGIPIDLLDRMVIIPTQPYQDEEIQAILKIR 160
++ HGIP DLL R++IIPT PY +EI+ I+++R
Sbjct: 346 TAAHGIPPDLLARLLIIPTHPYTPDEIKTIIRLR 379
>sp|Q6CQA9|RUVB1_KLULA RuvB-like helicase 1 OS=Kluyveromyces lactis (strain ATCC 8585 /
CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)
GN=RVB1 PE=3 SV=1
Length = 457
Score = 93.6 bits (231), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 71/119 (59%), Gaps = 18/119 (15%)
Query: 1 MVGQLQARRAAGVVLGMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAG 60
VGQ +AR A GV++ +IK K++G+AILLAG P TGKTA+A+ ++Q LGP PF + G
Sbjct: 42 FVGQAEAREACGVIVDLIKAKKMSGKAILLAGGPSTGKTALALAISQELGPKVPFCPLVG 101
Query: 61 SEIYSLEMNKTE---------------EETEMIEGEVVEI---QIERPATGLGSKVGKL 101
SE+YS+E+ KTE E E+ EGEV E+ + E P G G + +
Sbjct: 102 SELYSVEVKKTEALMENFRRAIGLRIKETKEVYEGEVTELTPEEAENPLGGYGKTISHV 160
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 25/33 (75%)
Query: 128 SPHGIPIDLLDRMVIIPTQPYQDEEIQAILKIR 160
SPHG+P DL+DR++I+ T PY EEI+ I+ R
Sbjct: 349 SPHGVPPDLIDRLLIVRTLPYNREEIKTIISKR 381
>sp|Q8AWW7|RUVB1_DANRE RuvB-like 1 OS=Danio rerio GN=ruvbl1 PE=2 SV=1
Length = 456
Score = 93.2 bits (230), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 69/119 (57%), Gaps = 18/119 (15%)
Query: 1 MVGQLQARRAAGVVLGMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAG 60
+VGQ AR A G++ +I+ K+AGRAILLAG PGTGKTA+A+ +AQ LG PF M G
Sbjct: 39 LVGQESAREACGIITELIRSKKMAGRAILLAGPPGTGKTALALAMAQELGNKVPFCPMVG 98
Query: 61 SEIYSLEMNKTE---------------EETEMIEGEVVEI---QIERPATGLGSKVGKL 101
SE+YS E+ KTE E E+ EGEV E+ + E P G G + +
Sbjct: 99 SEVYSSEIKKTEVLMENFRRAIGLRIKETKEVYEGEVTELTPCETENPMGGYGKTISHV 157
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/34 (61%), Positives = 28/34 (82%)
Query: 127 SSPHGIPIDLLDRMVIIPTQPYQDEEIQAILKIR 160
SSPHGIP+DLLDR++II T Y +E++ I+KIR
Sbjct: 345 SSPHGIPLDLLDRVMIIRTMLYTPQEMKQIIKIR 378
>sp|Q6BI60|RUVB1_DEBHA RuvB-like helicase 1 OS=Debaryomyces hansenii (strain ATCC 36239 /
CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=RBV1 PE=3
SV=1
Length = 457
Score = 93.2 bits (230), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 81/142 (57%), Gaps = 20/142 (14%)
Query: 1 MVGQLQARRAAGVVLGMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAG 60
VGQ AR A G+++ +IK +++G+AILLAG PGTGKTA+A+ ++Q LGP PF + G
Sbjct: 41 FVGQSDAREACGIIVDLIKSKRMSGKAILLAGAPGTGKTALALAISQELGPKVPFCPIVG 100
Query: 61 SEIYSLEMNKT---------------EEETEMIEGEVVEI---QIERPATGLGSKVGKLT 102
SE++S E+ KT +E E+ EGEV+E+ + E P G G + +
Sbjct: 101 SELFSAEIKKTAALMENFRRAIGLRIKETKEVYEGEVIELTPEEAENPLGGYGKTISHVI 160
Query: 103 --MKTTEMETSYDLGAKMIEAI 122
+KT + S L + E+I
Sbjct: 161 VGLKTAKGTKSLRLDPSIYESI 182
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 128 SPHGIPIDLLDRMVIIPTQPYQDEEIQAILKIR 160
SPHG P DL+DR++I+ T PY EEI+ I+ R
Sbjct: 349 SPHGCPADLIDRLLIVRTLPYNQEEIKIIISKR 381
>sp|Q8WZS3|RUVB1_NEUCR RuvB-like helicase 1 OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=rvb-1
PE=3 SV=1
Length = 458
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 78/142 (54%), Gaps = 20/142 (14%)
Query: 1 MVGQLQARRAAGVVLGMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAG 60
VGQ AR A GVV+ +IK K+AGR +LLAG PGTGKTA+A+ ++Q LG PF + G
Sbjct: 40 FVGQTTAREACGVVVDLIKAHKMAGRGVLLAGGPGTGKTALALAISQELGTKIPFCPITG 99
Query: 61 SEIYSLEMNKTE---------------EETEMIEGEVVEI---QIERPATGLGSKVGKLT 102
SEIYS E+ KTE E E+ EGEV E+ + E P G G + L
Sbjct: 100 SEIYSTEVKKTEVLMENFRRAIGLKVRETKEVYEGEVTELTPEEAENPLGGYGKTITTLL 159
Query: 103 --MKTTEMETSYDLGAKMIEAI 122
+K+ + + L + EAI
Sbjct: 160 IGLKSAKGQKKLRLDPSIYEAI 181
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 24/33 (72%)
Query: 128 SPHGIPIDLLDRMVIIPTQPYQDEEIQAILKIR 160
+ HGIP D L R++IIPT Y EEI+ I+KIR
Sbjct: 347 AAHGIPPDFLSRLLIIPTTAYDPEEIKRIVKIR 379
>sp|Q750R1|RUVB1_ASHGO RuvB-like helicase 1 OS=Ashbya gossypii (strain ATCC 10895 / CBS
109.51 / FGSC 9923 / NRRL Y-1056) GN=RVB1 PE=3 SV=1
Length = 459
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 71/119 (59%), Gaps = 18/119 (15%)
Query: 1 MVGQLQARRAAGVVLGMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAG 60
VGQ++AR A GV++ +IK +++GRAILLAG P TGKTA+A+ + Q LGP PF + G
Sbjct: 44 FVGQVEAREACGVIVDLIKAKRMSGRAILLAGGPSTGKTALALAITQELGPKVPFCPLVG 103
Query: 61 SEIYSLEMNKTE---------------EETEMIEGEVVEI---QIERPATGLGSKVGKL 101
SE++S+E+ KTE E E+ EGEV E+ + E P G G + +
Sbjct: 104 SELFSVEVKKTETLMENFRRAIGLRIKEVKEVYEGEVTELTPEEAENPLGGYGKTISHV 162
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 25/33 (75%)
Query: 128 SPHGIPIDLLDRMVIIPTQPYQDEEIQAILKIR 160
S HGIP DL+DR++I+ T PY +EI+ I++ R
Sbjct: 351 SAHGIPPDLIDRLLIVRTLPYTQDEIRVIIEKR 383
>sp|Q4P112|RUVB1_USTMA RuvB-like helicase 1 OS=Ustilago maydis (strain 521 / FGSC 9021)
GN=RVB1 PE=3 SV=1
Length = 488
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/142 (39%), Positives = 78/142 (54%), Gaps = 20/142 (14%)
Query: 1 MVGQLQARRAAGVVLGMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAG 60
VGQ AR A G+VL +I+ K AG+A+LLAG PGTGKTA+A+ ++Q LG PF M G
Sbjct: 56 FVGQKAAREACGLVLDLIRMKKFAGKALLLAGGPGTGKTALALAVSQELGHKVPFCPMVG 115
Query: 61 SEIYSLEMNKTE---------------EETEMIEGEVVEI---QIERPATGLGSKVGK-- 100
SE+YS E+ KTE E E+ EGE+ E+ + E P +G G +
Sbjct: 116 SEVYSSEVKKTEVLMENFRRAIGLRVRETKEVYEGEITELTPTEAENPLSGYGKTIAHVV 175
Query: 101 LTMKTTEMETSYDLGAKMIEAI 122
+ +KT + L + E+I
Sbjct: 176 IALKTVKGTKQLRLDPSIYESI 197
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 31/40 (77%)
Query: 121 AIGTAYSSPHGIPIDLLDRMVIIPTQPYQDEEIQAILKIR 160
A GT +PHGIP+DLLDR +I+ T PY+ +EI+ +L++R
Sbjct: 364 ASGTGIVAPHGIPLDLLDRCMIVRTMPYEKDEIREVLRLR 403
>sp|Q4ICA8|RUVB1_GIBZE RuvB-like helicase 1 OS=Gibberella zeae (strain PH-1 / ATCC
MYA-4620 / FGSC 9075 / NRRL 31084) GN=RVB1 PE=3 SV=1
Length = 458
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/142 (40%), Positives = 78/142 (54%), Gaps = 20/142 (14%)
Query: 1 MVGQLQARRAAGVVLGMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAG 60
VGQ AR + GVV+ +I+ K+AGR +LLAG PGTGKTA+A+ ++Q LG PF + G
Sbjct: 40 FVGQAAARESCGVVVDLIRAQKMAGRGVLLAGGPGTGKTALALAISQELGTKIPFCPIVG 99
Query: 61 SEIYSLEMNKTE---------------EETEMIEGEVVEI---QIERPATGLGSKVGKLT 102
SEIYS E+ KTE E E+ EGEV E+ + E P G G + L
Sbjct: 100 SEIYSAEVKKTEMLMENFRRAIGLKVRETKEVYEGEVTELTPEEAENPLGGYGKTISTLL 159
Query: 103 --MKTTEMETSYDLGAKMIEAI 122
+K+ + + L + EAI
Sbjct: 160 IGLKSAKGQKKLRLDPSIYEAI 181
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 26/33 (78%)
Query: 128 SPHGIPIDLLDRMVIIPTQPYQDEEIQAILKIR 160
+ HGIP D L RM+IIPT PY+ +EI+ I++IR
Sbjct: 347 AAHGIPSDFLARMLIIPTTPYEADEIKRIVRIR 379
>sp|Q8STP2|RUVB1_ENCCU RuvB-like protein 1 OS=Encephalitozoon cuniculi (strain GB-M1)
GN=RVB1 PE=1 SV=1
Length = 426
Score = 90.5 bits (223), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 87/142 (61%), Gaps = 20/142 (14%)
Query: 1 MVGQLQARRAAGVVLGMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAG 60
++GQ AR AAG+++ M++ +++GRA+L++G G+GKTA+A+G+++ LG TPFTSM+G
Sbjct: 31 VIGQENAREAAGLIVEMVRTKRMSGRAVLISGPVGSGKTALAVGISEELGAGTPFTSMSG 90
Query: 61 SEIYSLEMNKTE---------------EETEMIEGEVVEIQI---ERPATGLGSKVGKL- 101
SE+YS E+ KTE E ++ EGEVVE++I E P + ++ ++
Sbjct: 91 SEVYSNEVKKTEVLEEALRRSILVRMRELKDVYEGEVVELRIVDEENPLSSYPKRIKEMF 150
Query: 102 -TMKTTEMETSYDLGAKMIEAI 122
+KT++ L + E I
Sbjct: 151 VILKTSKESKKLKLAPSLYEQI 172
>sp|Q5A0W7|RUVB1_CANAL RuvB-like helicase 1 OS=Candida albicans (strain SC5314 / ATCC
MYA-2876) GN=RVB1 PE=3 SV=1
Length = 458
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 71/119 (59%), Gaps = 18/119 (15%)
Query: 1 MVGQLQARRAAGVVLGMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAG 60
VGQ +AR A G+++ +IK K++G+A+L+AG P TGKTA+A+ ++Q LGP PF + G
Sbjct: 42 FVGQNEAREACGIIVDLIKSKKMSGKAVLIAGPPATGKTALALAISQELGPKVPFCPIVG 101
Query: 61 SEIYSLEMNKT---------------EEETEMIEGEVVEI---QIERPATGLGSKVGKL 101
SE+YS E+ KT +E E+ EGEV+E+ + E P G G + +
Sbjct: 102 SELYSAEVKKTSALMENFRRAIGLRIKETKEVYEGEVIELTPEEAENPLGGYGKTISHV 160
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 128 SPHGIPIDLLDRMVIIPTQPYQDEEIQAILKIR 160
+PHG P DL+DR++I+ T PY EEI+ I+ R
Sbjct: 350 APHGCPPDLIDRLLIVRTLPYNQEEIKTIIGKR 382
>sp|P0CR26|RUVB1_CRYNJ RuvB-like helicase 1 OS=Cryptococcus neoformans var. neoformans
serotype D (strain JEC21 / ATCC MYA-565) GN=RVB1 PE=3
SV=1
Length = 484
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 78/142 (54%), Gaps = 20/142 (14%)
Query: 1 MVGQLQARRAAGVVLGMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAG 60
+GQ+ AR A G+ L ++K GK +GR +LL G PGTGKTA+A+ L+Q LG PF +M G
Sbjct: 56 FIGQILAREALGLHLSLLKGGKYSGRPLLLVGPPGTGKTALALALSQELGSKVPFCAMVG 115
Query: 61 SEIYSLEMNKTE---------------EETEMIEGEVVEI---QIERPATGLGSKVGKLT 102
SE+YS E+ KTE E E+ EGEV E+ + E P +G G + +
Sbjct: 116 SEVYSGEVKKTEVLGSCFRRAIGLRIKETKEVYEGEVTELTPSEAENPLSGYGKTISHVI 175
Query: 103 --MKTTEMETSYDLGAKMIEAI 122
+KT + L + E+I
Sbjct: 176 VGLKTVKGTKQLRLDPSVYESI 197
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 7/72 (9%)
Query: 90 PATGLGSKVGKLTMKTTEMETSYDLGAKMIEAIGTAYSSPHGIPIDLLDRMVIIPTQPYQ 149
P L S G T++ TE + ++ I A PHG+P+DLLDR +I+ TQ Y
Sbjct: 342 PYVVLASNRGISTIRGTEYDGVAGSASEGIRA-------PHGLPVDLLDRCMIVKTQLYT 394
Query: 150 DEEIQAILKIRL 161
+EI+ I+++R
Sbjct: 395 RDEIRRIVEMRC 406
>sp|P0CR27|RUVB1_CRYNB RuvB-like helicase 1 OS=Cryptococcus neoformans var. neoformans
serotype D (strain B-3501A) GN=RVB1 PE=3 SV=1
Length = 484
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 78/142 (54%), Gaps = 20/142 (14%)
Query: 1 MVGQLQARRAAGVVLGMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAG 60
+GQ+ AR A G+ L ++K GK +GR +LL G PGTGKTA+A+ L+Q LG PF +M G
Sbjct: 56 FIGQILAREALGLHLSLLKGGKYSGRPLLLVGPPGTGKTALALALSQELGSKVPFCAMVG 115
Query: 61 SEIYSLEMNKTE---------------EETEMIEGEVVEI---QIERPATGLGSKVGKLT 102
SE+YS E+ KTE E E+ EGEV E+ + E P +G G + +
Sbjct: 116 SEVYSGEVKKTEVLGSCFRRAIGLRIKETKEVYEGEVTELTPSEAENPLSGYGKTISHVI 175
Query: 103 --MKTTEMETSYDLGAKMIEAI 122
+KT + L + E+I
Sbjct: 176 VGLKTVKGTKQLRLDPSVYESI 197
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 7/72 (9%)
Query: 90 PATGLGSKVGKLTMKTTEMETSYDLGAKMIEAIGTAYSSPHGIPIDLLDRMVIIPTQPYQ 149
P L S G T++ TE + ++ I A PHG+P+DLLDR +I+ TQ Y
Sbjct: 342 PYVVLASNRGISTIRGTEYDGVAGSASEGIRA-------PHGLPVDLLDRCMIVKTQLYT 394
Query: 150 DEEIQAILKIRL 161
+EI+ I+++R
Sbjct: 395 RDEIRRIVEMRC 406
>sp|Q6CB52|RUVB1_YARLI RuvB-like helicase 1 OS=Yarrowia lipolytica (strain CLIB 122 / E
150) GN=RVB1 PE=3 SV=1
Length = 453
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/116 (42%), Positives = 69/116 (59%), Gaps = 18/116 (15%)
Query: 1 MVGQLQARRAAGVVLGMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAG 60
VGQ +AR A G+V+ +I+ K++GR ILLAG PGTGKTA+A+ ++Q LGP PF + G
Sbjct: 40 FVGQTEAREALGLVVDLIRASKMSGRGILLAGGPGTGKTALALAVSQELGPKVPFCPIVG 99
Query: 61 SEIYSLEMNKT---------------EEETEMIEGEVVEI---QIERPATGLGSKV 98
SEI+S E+ KT +E ++ EGEV E+ + E P G G +
Sbjct: 100 SEIFSAEVKKTAALMENFRRAIGLRIKETKDIYEGEVTELTPEEAEDPLGGYGKTI 155
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 26/35 (74%)
Query: 128 SPHGIPIDLLDRMVIIPTQPYQDEEIQAILKIRLV 162
SPHGI DLLDR++I+ T PY +EI+ I++ R V
Sbjct: 347 SPHGITTDLLDRLLIVRTLPYSLDEIKTIIQKRAV 381
>sp|Q9C0X6|RUVB1_SCHPO RuvB-like helicase 1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=rvb1 PE=3 SV=1
Length = 456
Score = 87.4 bits (215), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 66/121 (54%), Gaps = 18/121 (14%)
Query: 1 MVGQLQARRAAGVVLGMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAG 60
+GQ +AR A G++ +IK K G+ +L AG GTGKTA+A+ +AQ LGP PF M G
Sbjct: 40 FIGQEKAREACGIITDLIKSKKFGGKGVLFAGGAGTGKTALALAIAQELGPKVPFCPMVG 99
Query: 61 SEIYSLEMNKTE---------------EETEMIEGEVVEI---QIERPATGLGSKVGKLT 102
SE+YS E+ KTE E E+ EGEV E+ + E P G G + +
Sbjct: 100 SEVYSSEIKKTEALMENFRRAIGLRVKETKEVYEGEVTEMVPEEAENPLGGYGKTISHVL 159
Query: 103 M 103
+
Sbjct: 160 L 160
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 28/33 (84%)
Query: 128 SPHGIPIDLLDRMVIIPTQPYQDEEIQAILKIR 160
+PHGIP DLLDR++I+ T PY + EI++IL+IR
Sbjct: 347 APHGIPTDLLDRLLIVRTLPYSESEIRSILQIR 379
>sp|Q8SU27|RUVB2_ENCCU RuvB-like helicase 2 OS=Encephalitozoon cuniculi (strain GB-M1)
GN=RVB2 PE=1 SV=1
Length = 418
Score = 86.7 bits (213), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 81/133 (60%), Gaps = 28/133 (21%)
Query: 1 MVGQLQARRAAGVVLGMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAG 60
+VGQ++AR+A V+ M++ K G+ +L+ G G+GKTA+A+GL+++LG F S++G
Sbjct: 35 LVGQIKARKAMAVIRKMVESNK-GGKVVLIKGDRGSGKTALAIGLSKSLGG-VHFNSISG 92
Query: 61 SEIYSLEMNKTE---------------EETEMIEGEVVEIQIERPATGLGSKVGKLTMKT 105
+EIYSLEM+K+E E ++IEGEVV + R + +KT
Sbjct: 93 TEIYSLEMSKSEAITQALRKSVGLRIKESVKVIEGEVVSLSGRR-----------IVLKT 141
Query: 106 TEMETSYDLGAKM 118
+ME+S+++G KM
Sbjct: 142 VDMESSFEIGEKM 154
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 29/43 (67%)
Query: 123 GTAYSSPHGIPIDLLDRMVIIPTQPYQDEEIQAILKIRLVKNE 165
GT SP+GIP D +DR +II + + +++AIL+ R+++ +
Sbjct: 311 GTDEPSPYGIPRDFIDRALIISMEKHCRRDLEAILRHRILEED 353
>sp|Q54YV4|LONM1_DICDI Lon protease homolog, mitochondrial 1 OS=Dictyostelium discoideum
GN=DDB_G0278063 PE=3 SV=3
Length = 956
Score = 43.5 bits (101), Expect = 7e-04, Method: Composition-based stats.
Identities = 52/178 (29%), Positives = 81/178 (45%), Gaps = 36/178 (20%)
Query: 13 VVLGMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGPD-------------------- 52
+ +G IK G + G+ + G PGTGKT+IA +A+AL +
Sbjct: 493 ISVGHIK-GTVQGKILCFIGPPGTGKTSIAKSIAKALKKEFFRFSVGGLFDESEIKGHRR 551
Query: 53 TPFTSMAGSEIYSLEMNKTEEETEMIEGEVVEIQIER---PATGLGSKVG---KLTMKTT 106
T SM G I +L++ +T +I+ E+ +I P++ L + ++
Sbjct: 552 TYVGSMPGKIIQALKITQTSNPVILID-EIDKIGKRNHGDPSSALLEVLDPEQNVSFVDH 610
Query: 107 EMETSYDLGAKMIEAIGTAYSSPHGIPIDLLDRMVIIPTQPYQDEEIQAILKIRLVKN 164
++T YDL + I TA +S IP L DRM II Y +EE +I +VKN
Sbjct: 611 YLDTPYDLSKVLF--ICTA-NSGQDIPAALSDRMEIIRLPGYVEEE-----QIEIVKN 660
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.133 0.360
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,606,102
Number of Sequences: 539616
Number of extensions: 2528569
Number of successful extensions: 14022
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 727
Number of HSP's successfully gapped in prelim test: 718
Number of HSP's that attempted gapping in prelim test: 13042
Number of HSP's gapped (non-prelim): 1648
length of query: 174
length of database: 191,569,459
effective HSP length: 109
effective length of query: 65
effective length of database: 132,751,315
effective search space: 8628835475
effective search space used: 8628835475
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 57 (26.6 bits)