RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy14616
(174 letters)
>d2cqaa1 b.40.4.14 (A:8-89) RuvB-like 2 protein, RUVBL2 (TIP49b)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 82
Score = 72.1 bits (177), Expect = 5e-18
Identities = 42/50 (84%), Positives = 47/50 (94%)
Query: 73 EETEMIEGEVVEIQIERPATGLGSKVGKLTMKTTEMETSYDLGAKMIEAI 122
EETE+IEGEVVEIQI+RPATG GSKVGKLT+KTTEMET YDLG KMIE++
Sbjct: 2 EETEIIEGEVVEIQIDRPATGTGSKVGKLTLKTTEMETIYDLGTKMIESL 51
>d1w44a_ c.37.1.11 (A:) NTPase P4 {Bacteriophage phi-12 [TaxId:
161736]}
Length = 321
Score = 48.5 bits (115), Expect = 7e-08
Identities = 12/61 (19%), Positives = 24/61 (39%)
Query: 14 VLGMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIYSLEMNKTEE 73
V+ + A +++ G+ +GKT + L +ALG + ++ E S
Sbjct: 112 VVAEFGGHRYASGMVIVTGKGNSGKTPLVHALGEALGGKDKYATVRFGEPLSGYNTDFNV 171
Query: 74 E 74
Sbjct: 172 F 172
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase
domain {Simian virus 40 [TaxId: 10633]}
Length = 362
Score = 43.9 bits (103), Expect = 3e-06
Identities = 19/166 (11%), Positives = 38/166 (22%), Gaps = 14/166 (8%)
Query: 15 LGMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIYS--------- 65
L + R L G +GKT +A L + G ++
Sbjct: 144 LKCMVYNIPKKRYWLFKGPIDSGKTTLAAALLELCG--GKALNVNLPLDRLNFELGVAID 201
Query: 66 --LEMNKTEEETEMIEGEVVEIQIERPATGLGSKVGKLTMKTTEMETSYDLGAKMIEAIG 123
L + + + T ++ Q L + E + I
Sbjct: 202 QFLVVFEDVKGTGGESRDLPSGQGINNLDNLRDYLDGSVKVNLEKKHLNKRTQIFPPGIV 261
Query: 124 TAYSSPHGIPIDLLDRMVIIPTQPYQDEEIQAILKIRLVKNERNEI 169
T + I + + L++ +
Sbjct: 262 TMNEYSVPKTLQARFVKQIDFRPKDYLKHCLERSE-FLLEKRIIQS 306
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI
{Rhodobacter capsulatus [TaxId: 1061]}
Length = 333
Score = 41.1 bits (95), Expect = 2e-05
Identities = 23/146 (15%), Positives = 46/146 (31%), Gaps = 19/146 (13%)
Query: 2 VGQLQARRAAGVVLGMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGS 61
VGQ + A ++L + G +L+ G GTGK+ LA L ++ G
Sbjct: 10 VGQEDMKLA--LLLTAVDPG---IGGVLVFGDRGTGKSTAVRALAALLP---EIEAVEGC 61
Query: 62 EIYSLEMNKTEEETEMIEGEVVEIQIERPATGLGSKVGKLTMKTTEMETSYDLGAKMIEA 121
+ S + + ++ V+ LG ++ + A
Sbjct: 62 PVSSPNVEMIPDWATVLSTNVIRKPTPVVDLPLGVSEDRVVG-----------ALDIERA 110
Query: 122 IGTAYSSPHGIPIDLLDRMVIIPTQP 147
I + + +R + +
Sbjct: 111 ISKGEKAFEPGLLARANRGYLYIDEC 136
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 176
Score = 39.2 bits (90), Expect = 8e-05
Identities = 15/68 (22%), Positives = 28/68 (41%), Gaps = 2/68 (2%)
Query: 24 AGRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIYSLEMNKTEEETEMIEGEVV 83
G +LL+G PG+GK+ IA LA G P +++ + + +
Sbjct: 3 GGNILLLSGHPGSGKSTIAEALANLPGV--PKVHFHSDDLWGYIKHGRIDPWLPQSHQQN 60
Query: 84 EIQIERPA 91
+ ++ A
Sbjct: 61 RMIMQIAA 68
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Length = 443
Score = 39.7 bits (92), Expect = 9e-05
Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 11/71 (15%)
Query: 2 VGQLQARRAAGVVL---------GMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGPD 52
+GQ A+RA + L ++ + IL+ G G GKT IA LA+ +
Sbjct: 17 IGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLA--N 74
Query: 53 TPFTSMAGSEI 63
PF + ++
Sbjct: 75 APFIKVEATKF 85
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA
{Escherichia coli [TaxId: 562]}
Length = 274
Score = 39.2 bits (90), Expect = 9e-05
Identities = 17/121 (14%), Positives = 36/121 (29%)
Query: 20 EGKIAGRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIYSLEMNKTEEETEMIE 79
+AG L G GK+ +A+ LA + + + E+ I
Sbjct: 24 PNMVAGTVGALVSPGGAGKSMLALQLAAQIAGGPDLLEVGELPTGPVIYLPAEDPPTAIH 83
Query: 80 GEVVEIQIERPATGLGSKVGKLTMKTTEMETSYDLGAKMIEAIGTAYSSPHGIPIDLLDR 139
+ + A + L ++ + + + + A + +D L R
Sbjct: 84 HRLHALGAHLSAEERQAVADGLLIQPLIGSLPNIMAPEWFDGLKRAAEGRRLMVLDTLRR 143
Query: 140 M 140
Sbjct: 144 F 144
>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB
{Thermus thermophilus [TaxId: 274]}
Length = 239
Score = 37.2 bits (85), Expect = 4e-04
Identities = 37/173 (21%), Positives = 60/173 (34%), Gaps = 10/173 (5%)
Query: 1 MVGQLQARRAAGVVLGMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAG 60
+GQ + ++ V L K K +LL G PG GKT +A +A LG +G
Sbjct: 11 YIGQERLKQKLRVYLEAAKARKEPLEHLLLFGPPGLGKTTLAHVIAHELG--VNLRVTSG 68
Query: 61 SEIYSLEMNKTEEETEMIEGEVVEIQIERPATGLGSKVGKLTMK--TTEMETSYDLGAKM 118
I + EG+++ I + + M+ ++ A+
Sbjct: 69 PAIEKPGDLAAILANSLEEGDILFIDEIHRLSRQAEEHLYPAMEDFVMDIVIGQGPAART 128
Query: 119 IEA------IGTAYSSPHGIPIDLLDRMVIIPTQPYQDEEIQAILKIRLVKNE 165
I + A + P I LL R I+ Y E A +R +
Sbjct: 129 IRLELPRFTLIGATTRPGLITAPLLSRFGIVEHLEYYTPEELAQGVMRDARLL 181
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS
kinase) {Human (Homo sapiens) [TaxId: 9606]}
Length = 195
Score = 37.0 bits (84), Expect = 5e-04
Identities = 21/149 (14%), Positives = 40/149 (26%), Gaps = 2/149 (1%)
Query: 25 GRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIYSLEMNKTEEETEMIEGEVVE 84
G + L G G GKT ++M L + L + +NK + E V
Sbjct: 19 GCTVWLTGLSGAGKTTVSMALEEYLVCHGIPCYTLDGDNIRQGLNKNLGFSPEDREENVR 78
Query: 85 IQIERPATGLGSKVGKLTMKTTEMETSYDLGAKMIEAIGTAYSSPHGIPIDLLDRMVIIP 144
E + + +T + + ++ E + L
Sbjct: 79 RIAEVAKLFADAGLVCITSFISPYTQDRNNARQIHEGASLPF--FEVFVDAPLHVCEQRD 136
Query: 145 TQPYQDEEIQAILKIRLVKNERNEIYNHP 173
+ + +K + E P
Sbjct: 137 VKGLYKKARAGEIKGFTGIDSEYEKPEAP 165
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus
thermophilus [TaxId: 274]}
Length = 387
Score = 37.0 bits (85), Expect = 7e-04
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Query: 28 ILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIYSLEMNKTEEETEMIEGEVVE 84
+L G+PG GKTAI GLAQ + + G I SL+M + GE E
Sbjct: 46 PVLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKGKRIVSLQMGSLLAGAKY-RGEFEE 101
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase
III, N-domain {Escherichia coli [TaxId: 562]}
Length = 207
Score = 36.2 bits (82), Expect = 8e-04
Identities = 8/32 (25%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Query: 17 MIKEGKIAGRAILLAGQPGTGKTAIAMGLAQA 48
+ G+ A+L+ PG G A+ L++
Sbjct: 17 SYQAGRGHH-ALLIQALPGMGDDALIYALSRY 47
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta,
toxin zeta subunit {Streptococcus pyogenes [TaxId:
1314]}
Length = 273
Score = 36.5 bits (83), Expect = 9e-04
Identities = 13/65 (20%), Positives = 21/65 (32%), Gaps = 2/65 (3%)
Query: 26 RAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIYSLEMNKTEEETEMIEGEVVEI 85
A LL GQPG+GKT++ + + + N E + V +
Sbjct: 33 TAFLLGGQPGSGKTSLRSAIFEET--QGNVIVIDNDTFKQQHPNFDELVKLYEKDVVKHV 90
Query: 86 QIERP 90
Sbjct: 91 TPYSN 95
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase
{Streptomyces venezuelae [TaxId: 54571]}
Length = 178
Score = 35.8 bits (81), Expect = 0.001
Identities = 9/27 (33%), Positives = 11/27 (40%)
Query: 24 AGRAILLAGQPGTGKTAIAMGLAQALG 50
R I+L G GK+ I L L
Sbjct: 2 TTRMIILNGGSSAGKSGIVRCLQSVLP 28
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 252
Score = 36.3 bits (82), Expect = 0.001
Identities = 13/85 (15%), Positives = 28/85 (32%), Gaps = 4/85 (4%)
Query: 1 MVGQLQARRAAGVVLGMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAG 60
+ + + + + + +LL G GTGK M L +++ +
Sbjct: 13 LSHNEELTNF---LKSLSDQPRDL-PHLLLYGPNGTGKKTRCMALLESIFGPGVYRLKID 68
Query: 61 SEIYSLEMNKTEEETEMIEGEVVEI 85
+ N+ E + +EI
Sbjct: 69 VRQFVTASNRKLELNVVSSPYHLEI 93
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli
[TaxId: 562]}
Length = 169
Score = 34.7 bits (78), Expect = 0.003
Identities = 24/146 (16%), Positives = 39/146 (26%), Gaps = 5/146 (3%)
Query: 26 RAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIYSLEMNKTEEETEMIEGEVVEI 85
R I L G G GK+ I LAQ L F + E +
Sbjct: 3 RNIFLVGPMGAGKSTIGRQLAQQLN--MEFYDSDQEIEKRTGADVGWVFDLEGEEGFRDR 60
Query: 86 QIERPATGLGSKVGKLTMKTTEMETSYDLGAKMIEAIGTAYSSPHGIPIDLLDRMVIIPT 145
+ + + L +++ + + L R
Sbjct: 61 EEKVINELTEKQGIVLATGGGSVKSRETRNRLSARGVVVYLETT---IEKQLARTQRDKK 117
Query: 146 QPYQDEEIQAILKIRLVKNERNEIYN 171
+P E + + NERN +Y
Sbjct: 118 RPLLHVETPPREVLEALANERNPLYE 143
>d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH
{Thermus thermophilus [TaxId: 274]}
Length = 247
Score = 34.8 bits (80), Expect = 0.003
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Query: 21 GKIAGRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIYSLEMNKTEE 73
G + +LL G PG GKT +A +A PF + +GS+ + +
Sbjct: 38 GARIPKGVLLVGPPGVGKTHLARAVAGEAR--VPFITASGSDFVEMFVGVGAA 88
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR,
ribosylnicotinamide kinase domain {Haemophilus
influenzae [TaxId: 727]}
Length = 192
Score = 34.7 bits (78), Expect = 0.003
Identities = 9/54 (16%), Positives = 20/54 (37%), Gaps = 2/54 (3%)
Query: 26 RAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIYSLEMNKTEEETEMIE 79
+ + + G +GK+ + LA T G E ++ E+ + +
Sbjct: 8 KTVAILGGESSGKSVLVNKLAAVFN--TTSAWEYGREFVFEKLGGDEQAMQYSD 59
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal
domain {Aeropyrum pernix [TaxId: 56636]}
Length = 287
Score = 34.3 bits (77), Expect = 0.005
Identities = 10/48 (20%), Positives = 17/48 (35%), Gaps = 3/48 (6%)
Query: 6 QARRAAGVVLGMIKEGKIAGR---AILLAGQPGTGKTAIAMGLAQALG 50
+A A + L + G G+ G GKT +A + +
Sbjct: 24 EAEALARIYLNRLLSGAGLSDVNMIYGSIGRVGIGKTTLAKFTVKRVS 71
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum
aerophilum [TaxId: 13773]}
Length = 276
Score = 34.0 bits (76), Expect = 0.005
Identities = 11/50 (22%), Positives = 19/50 (38%)
Query: 6 QARRAAGVVLGMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGPDTPF 55
Q ++ ++ ++ L G+PGTGKT L + T
Sbjct: 24 QLQQLDILLGNWLRNPGHHYPRATLLGRPGTGKTVTLRKLWELYKDKTTA 73
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain
{Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Length = 183
Score = 33.5 bits (75), Expect = 0.007
Identities = 11/26 (42%), Positives = 12/26 (46%)
Query: 25 GRAILLAGQPGTGKTAIAMGLAQALG 50
G I L G +GK AIA L L
Sbjct: 6 GFTIFLTGYMNSGKDAIARALQVTLN 31
>d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 242
Score = 33.6 bits (75), Expect = 0.007
Identities = 12/48 (25%), Positives = 18/48 (37%)
Query: 17 MIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIY 64
+++ G G + G+ TGKT I LA G +Y
Sbjct: 15 LLQGGIETGSITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMY 62
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH
{Escherichia coli [TaxId: 562]}
Length = 256
Score = 33.3 bits (76), Expect = 0.008
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 26 RAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIYSLEMNKTEE 73
+ +L+ G PGTGKT +A +A PF +++GS+ + +
Sbjct: 46 KGVLMVGPPGTGKTLLAKAIAGEAK--VPFFTISGSDFVEMFVGVGAS 91
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide
biosynthesis protein MobB {Escherichia coli [TaxId:
562]}
Length = 170
Score = 33.0 bits (74), Expect = 0.009
Identities = 17/132 (12%), Positives = 36/132 (27%), Gaps = 3/132 (2%)
Query: 28 ILLAGQPGTGKTAIAMGLAQAL---GPDTPFTSMAGSEIYSLEMNKTEEETEMIEGEVVE 84
+ A GTGKT + L AL G ++ + K E
Sbjct: 5 LAFAAWSGTGKTTLLKKLIPALCARGIRPGLIKHTHHDMDVDKPGKDSYELRKAGAAQTI 64
Query: 85 IQIERPATGLGSKVGKLTMKTTEMETSYDLGAKMIEAIGTAYSSPHGIPIDLLDRMVIIP 144
+ ++ + + + + + D + + + D P
Sbjct: 65 VASQQRWALMTETPDEEELDLQFLASRMDTSKLDLILVEGFKHEEIAKIVLFRDGAGHRP 124
Query: 145 TQPYQDEEIQAI 156
+ D + A+
Sbjct: 125 EELVIDRHVIAV 136
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB
{Thermotoga maritima [TaxId: 2336]}
Length = 238
Score = 33.0 bits (74), Expect = 0.010
Identities = 18/57 (31%), Positives = 26/57 (45%)
Query: 1 MVGQLQARRAAGVVLGMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGPDTPFTS 57
+GQ ++ + L K +LLAG PG GKT +A +A L + TS
Sbjct: 11 FIGQENVKKKLSLALEAAKMRGEVLDHVLLAGPPGLGKTTLAHIIASELQTNIHVTS 67
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major
[TaxId: 5664]}
Length = 174
Score = 32.7 bits (73), Expect = 0.011
Identities = 24/151 (15%), Positives = 46/151 (30%), Gaps = 7/151 (4%)
Query: 22 KIAGRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIYSLEMNKTEEETEMIEGE 81
+ G IL+ G PGTGKT++A +A L E + E ++
Sbjct: 2 QPKGINILITGTPGTGKTSMAEMIAAELDGFQHLEVG----KLVKENHFYTEYDTELDTH 57
Query: 82 VVEIQIERPATGLGSKVGKLTMKTTEMETSYDLGAKMIEAIGTAYSSPHGIPIDLLDRMV 141
++E + E + S +L + + + L +R+
Sbjct: 58 IIEEKDEDRLLDFMEPIMVSRGNHVVDYHSSELFPERWFHMVVVLHTS---TEVLFERLT 114
Query: 142 IIPTQPYQDEEIQAILKIRLVKNERNEIYNH 172
+ E + + E + Y
Sbjct: 115 KRQYSEAKRAENMEAEIQCICEEEARDAYED 145
>d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic
domain {Archaeon Methanococcus voltae [TaxId: 2188]}
Length = 258
Score = 32.7 bits (73), Expect = 0.013
Identities = 15/137 (10%), Positives = 32/137 (23%), Gaps = 7/137 (5%)
Query: 17 MIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIYSLEMNKTEEETE 76
++ G + AG G+GKT I L ++ + +
Sbjct: 26 VLGGGLESQSVTEFAGVFGSGKTQIMHQSCVNLQNPEFLFYD----EEAVSKGEVAQPKA 81
Query: 77 MI---EGEVVEIQIERPATGLGSKVGKLTMKTTEMETSYDLGAKMIEAIGTAYSSPHGIP 133
+ EG +I + A G + T +
Sbjct: 82 VYIDTEGTFRPERIMQMAEHAGIDGQTVLDNTFVARAYNSDMQMLFAEKIEDLIQEGNNI 141
Query: 134 IDLLDRMVIIPTQPYQD 150
++ + +
Sbjct: 142 KLVVIDSLTSTFRNEYT 158
>d1xpua3 c.37.1.11 (A:129-417) Transcription termination factor Rho,
ATPase domain {Escherichia coli [TaxId: 562]}
Length = 289
Score = 32.7 bits (74), Expect = 0.015
Identities = 17/66 (25%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Query: 25 GRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIYSLEMNKTEEETEMIEGEVVE 84
G+ L+ P GKT + +AQ++ + P + I TE + +++GEVV
Sbjct: 43 GQRGLIVAPPKAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQ-RLVKGEVVA 101
Query: 85 IQIERP 90
+ P
Sbjct: 102 STFDEP 107
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus
halodurans [TaxId: 86665]}
Length = 176
Score = 31.9 bits (71), Expect = 0.019
Identities = 19/150 (12%), Positives = 38/150 (25%), Gaps = 10/150 (6%)
Query: 26 RAILLAGQPGTGKTAIAMGLAQALGP------DTPFTSMAGSEIYSLEMNKTEEETEMIE 79
+ ++ G G GK+ LA L D + G E ++ T
Sbjct: 3 KLYIITGPAGVGKSTTCKRLAAQLDNSAYIEGDIINHMVVGGYRPPWESDELLALTWKNI 62
Query: 80 GEVVEIQIERPATGLGSKVGKLTMKTTEMETSYDLGAKMIEAIGTAYSSPHGIPIDLLDR 139
++ + V E E ++ + + +LL R
Sbjct: 63 TDLTVNFLLAQ----NDVVLDYIAFPDEAEALAQTVQAKVDDVEIRFIILWTNREELLRR 118
Query: 140 MVIIPTQPYQDEEIQAILKIRLVKNERNEI 169
+ E +++ K
Sbjct: 119 DALRKKDEQMGERCLELVEEFESKGIDERY 148
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of
N-ethylmalemide-sensitive fusion (NSF) protein {Chinese
hamster (Cricetulus griseus) [TaxId: 10029]}
Length = 246
Score = 32.2 bits (72), Expect = 0.023
Identities = 9/17 (52%), Positives = 13/17 (76%)
Query: 26 RAILLAGQPGTGKTAIA 42
++LL G P +GKTA+A
Sbjct: 41 VSVLLEGPPHSGKTALA 57
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens),
isoenzyme 6 [TaxId: 9606]}
Length = 173
Score = 31.8 bits (71), Expect = 0.024
Identities = 21/144 (14%), Positives = 40/144 (27%), Gaps = 12/144 (8%)
Query: 28 ILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIYSLEMNKTEEETEMIEGEVVEIQI 87
ILL G PG GKT + LA G + ++ + E + E + +++
Sbjct: 7 ILLTGTPGVGKTTLGKELASKSG--LKYINV---GDLAREEQLYDGYDEEYDCPILDEDR 61
Query: 88 ERPATGLGSKVGKLTMKTTEMETSYDLGAKMIEAIGTAYSSPHGIPIDLLDRMVIIPTQP 147
M+ + Y E L +R+
Sbjct: 62 VV-------DELDNQMREGGVIVDYHGCDFFPERWFHIVFVLRTDTNVLYERLETRGYNE 114
Query: 148 YQDEEIQAILKIRLVKNERNEIYN 171
+ + +++ E Y
Sbjct: 115 KKLTDNIQCEIFQVLYEEATASYK 138
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3'
phosphatase, C-terminal domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 172
Score = 31.8 bits (71), Expect = 0.025
Identities = 6/25 (24%), Positives = 10/25 (40%)
Query: 26 RAILLAGQPGTGKTAIAMGLAQALG 50
++ G PG GK+ + G
Sbjct: 15 EVVVAVGFPGAGKSTFIQEHLVSAG 39
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 165
Score = 31.5 bits (70), Expect = 0.031
Identities = 28/149 (18%), Positives = 49/149 (32%), Gaps = 17/149 (11%)
Query: 28 ILLAGQPGTGKTAIAMGLAQALG-----PDTPFTSMAGSEIYSLEMNKTEEETEMIEGEV 82
+L G PG+GK+ I LA+ALG D G I + E+E IE +V
Sbjct: 4 AVLVGLPGSGKSTIGRRLAKALGVGLLDTDVAIEQRTGRSIADIFATDGEQEFRRIEEDV 63
Query: 83 VEIQIERPATGLGSKVGKLTMKTTEMETSYDLGAKMIEAIGTAYSSPHGIPIDLLDRMVI 142
V + + S+ G+ + +
Sbjct: 64 VRAALADH------DGVLSLGGGAVTSPGVRAALAGHTVVYLEISAAEGVRRTGGNTVRP 117
Query: 143 IPTQPYQDEEIQAILKIRLVKNERNEIYN 171
+ P + E+ +A++ +R +Y
Sbjct: 118 LLAGPDRAEKYRALM------AKRAPLYR 140
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId:
562]}
Length = 171
Score = 31.5 bits (70), Expect = 0.031
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 25 GRAILLAGQPGTGKTAIAMGLAQALG 50
+L G G+GK+A+A +A L
Sbjct: 6 HHIYVLMGVSGSGKSAVASEVAHQLH 31
>d1bifa1 c.37.1.7 (A:37-249)
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase,
kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 213
Score = 31.5 bits (70), Expect = 0.037
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 28 ILLAGQPGTGKTAIAMGLAQALG 50
I++ G P GKT I+ L + L
Sbjct: 5 IVMVGLPARGKTYISKKLTRYLN 27
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia
chrysanthemi [TaxId: 556]}
Length = 170
Score = 31.1 bits (69), Expect = 0.037
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 26 RAILLAGQPGTGKTAIAMGLAQALG 50
I + G G G T + LA+ALG
Sbjct: 3 EPIFMVGARGCGMTTVGRELARALG 27
>d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC
{Synechococcus sp. strain PCC 7942 (Anacystis nidulans
R2) [TaxId: 1140]}
Length = 242
Score = 31.4 bits (70), Expect = 0.038
Identities = 10/33 (30%), Positives = 12/33 (36%)
Query: 17 MIKEGKIAGRAILLAGQPGTGKTAIAMGLAQAL 49
M G IL G GTGKT + +
Sbjct: 18 MCGGGFFKDSIILATGATGTGKTLLVSRFVENA 50
>d1tuea_ c.37.1.20 (A:) Replication protein E1 helicase domain
{Human papillomavirus type 18 [TaxId: 333761]}
Length = 205
Score = 31.3 bits (71), Expect = 0.040
Identities = 5/25 (20%), Positives = 9/25 (36%)
Query: 26 RAILLAGQPGTGKTAIAMGLAQALG 50
++ G TGK+ M +
Sbjct: 54 NCLVFCGPANTGKSYFGMSFIHFIQ 78
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter
jejuni [TaxId: 197]}
Length = 161
Score = 31.0 bits (69), Expect = 0.042
Identities = 13/60 (21%), Positives = 21/60 (35%), Gaps = 2/60 (3%)
Query: 26 RAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIYSLEMNKTEEETEMIEGEVVEI 85
+ I+ G G+GK+ +A LA+ L F +E + E E
Sbjct: 1 KNIVFIGFMGSGKSTLARALAKDLD--LVFLDSDFLIEQKFNQKVSEIFEQKRENFFREQ 58
>d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic
domain {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 251
Score = 31.2 bits (69), Expect = 0.046
Identities = 10/41 (24%), Positives = 14/41 (34%)
Query: 24 AGRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIY 64
G L G+ TGK+ + LA G +Y
Sbjct: 33 TGSITELFGEFRTGKSQLCHTLAVTCQIPLDIGGGEGKCLY 73
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC
{Synechococcus sp. strain PCC 7942 (Anacystis nidulans
R2) [TaxId: 1140]}
Length = 242
Score = 31.1 bits (69), Expect = 0.051
Identities = 10/30 (33%), Positives = 16/30 (53%)
Query: 17 MIKEGKIAGRAILLAGQPGTGKTAIAMGLA 46
+ G GR+ L++G GTGKT ++
Sbjct: 18 ISHGGLPIGRSTLVSGTSGTGKTLFSIQFL 47
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 189
Score = 30.8 bits (68), Expect = 0.056
Identities = 13/100 (13%), Positives = 31/100 (31%)
Query: 26 RAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIYSLEMNKTEEETEMIEGEVVEI 85
R + L G PG GKT + ++ L +E + + + G +
Sbjct: 2 RHVFLTGPPGVGKTTLIHKASEVLKSSGVPVDGFYTEEVRQGGRRIGFDVVTLSGTRGPL 61
Query: 86 QIERPATGLGSKVGKLTMKTTEMETSYDLGAKMIEAIGTA 125
G + ++ ++ + L ++ +
Sbjct: 62 SRVGLEPPPGKRECRVGQYVVDLTSFEQLALPVLRNADCS 101
>d1yksa1 c.37.1.14 (A:185-324) YFV helicase domain {Yellow fever
virus [TaxId: 11089]}
Length = 140
Score = 30.4 bits (67), Expect = 0.060
Identities = 9/27 (33%), Positives = 13/27 (48%), Gaps = 4/27 (14%)
Query: 17 MIKEGKIAGRAILLAGQPGTGKTAIAM 43
M+K+G +L PG GKT +
Sbjct: 3 MLKKGMT----TVLDFHPGAGKTRRFL 25
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 237
Score = 30.8 bits (68), Expect = 0.065
Identities = 13/49 (26%), Positives = 21/49 (42%), Gaps = 5/49 (10%)
Query: 1 MVGQLQARRAAGVVLGMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQAL 49
+ Q A + +K + +L G PGTGKT+ + L + L
Sbjct: 14 VTAQDHAVTV---LKKTLKSANLP--HMLFYGPPGTGKTSTILALTKEL 57
>d1pzna2 c.37.1.11 (A:96-349) DNA repair protein Rad51, catalytic
domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Length = 254
Score = 30.8 bits (68), Expect = 0.066
Identities = 12/48 (25%), Positives = 21/48 (43%)
Query: 17 MIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIY 64
++ G + G+ G+GKT +A LA + + GS I+
Sbjct: 28 LLGGGIETQAITEVFGEFGSGKTQLAHTLAVMVQLPPEEGGLNGSVIW 75
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase),
helicase domain {Bacteriophage T7 [TaxId: 10760]}
Length = 277
Score = 30.8 bits (68), Expect = 0.075
Identities = 7/37 (18%), Positives = 10/37 (27%)
Query: 25 GRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGS 61
G I++ G GK+ A G
Sbjct: 35 GEVIMVTSGSGMGKSTFVRQQALQWGTAMGKKVGLAM 71
>d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III,
N-domain {Escherichia coli [TaxId: 562]}
Length = 239
Score = 30.5 bits (68), Expect = 0.079
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 4/57 (7%)
Query: 1 MVGQLQARRAAGVVLGMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGPDTPFTS 57
+VGQ A + + G+I A L +G G GKT+IA LA+ L +T T+
Sbjct: 14 VVGQEHVLTA---LANGLSLGRIH-HAYLFSGTRGVGKTSIARLLAKGLNCETGITA 66
>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon
Pyrococcus furiosus [TaxId: 2261]}
Length = 237
Score = 30.4 bits (67), Expect = 0.083
Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Query: 25 GRAILLAGQ-PGTGKTAIAMGLAQAL 49
GR I + GTGKT + L+ AL
Sbjct: 2 GRIISIVSGKGGTGKTTVTANLSVAL 27
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus
solfataricus [TaxId: 2287]}
Length = 283
Score = 30.5 bits (67), Expect = 0.084
Identities = 8/41 (19%), Positives = 14/41 (34%)
Query: 22 KIAGRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSE 62
+ L+ G TGK++I L + + E
Sbjct: 26 GLRAPITLVLGLRRTGKSSIIKIGINELNLPYIYLDLRKFE 66
>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon
Archaeoglobus fulgidus [TaxId: 2234]}
Length = 232
Score = 30.1 bits (66), Expect = 0.12
Identities = 12/25 (48%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Query: 26 RAILLAGQ-PGTGKTAIAMGLAQAL 49
R I +A GTGKT I L AL
Sbjct: 2 RTITVASGKGGTGKTTITANLGVAL 26
>d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 265
Score = 30.2 bits (67), Expect = 0.12
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 19 KEGKIAGRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIYSLEMNKTEE 73
K G + +L G PG GKT +A +A F S+ G E+ ++ ++E
Sbjct: 35 KFGMTPSKGVLFYGPPGCGKTLLAKAIANECQ--ANFISIKGPELLTMWFGESEA 87
>d2gnoa2 c.37.1.20 (A:11-208) gamma subunit of DNA polymerase III,
N-domain {Thermotoga maritima [TaxId: 2336]}
Length = 198
Score = 29.6 bits (66), Expect = 0.16
Identities = 4/24 (16%), Positives = 13/24 (54%)
Query: 27 AILLAGQPGTGKTAIAMGLAQALG 50
+IL+ G+ + +++ L + +
Sbjct: 17 SILINGEDLSYPREVSLELPEYVE 40
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 198
Score = 29.3 bits (64), Expect = 0.16
Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Query: 18 IKEGKIAGRAIL-LAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIYSLEMNKTEEE 74
I K AGR +L + G +GKT +A L+Q L + + + +E K
Sbjct: 14 ILAIKTAGRLVLGIDGLSRSGKTTLANQLSQTLREQGISVCVFHMDDHIVERAKRYHT 71
>d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 258
Score = 29.2 bits (64), Expect = 0.20
Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Query: 26 RAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIYSLEMNKTEEETEM 77
R ILL G PGTGKT IA +A G F + G EI S ++E
Sbjct: 39 RGILLYGPPGTGKTLIARAVANETGA--FFFLINGPEIMSKLAGESESNLRK 88
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain
{Mycoplasma pneumoniae [TaxId: 2104]}
Length = 177
Score = 29.1 bits (65), Expect = 0.21
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 23 IAGRAILLAGQPGTGKTAIAMGLAQA 48
+ G +LL G+ G GK+ A+ L
Sbjct: 13 VFGVGVLLTGRSGIGKSECALDLINK 38
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain
{Staphylococcus xylosus [TaxId: 1288]}
Length = 169
Score = 28.8 bits (64), Expect = 0.22
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 23 IAGRAILLAGQPGTGKTAIAMGLAQA 48
+ G +L+ G G GK+ A+ L +
Sbjct: 13 VYGVGVLITGDSGIGKSETALELIKR 38
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 253
Score = 29.0 bits (63), Expect = 0.24
Identities = 18/60 (30%), Positives = 27/60 (45%)
Query: 19 KEGKIAGRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIYSLEMNKTEEETEMI 78
K+G RA +L G PG GKT A +AQ LG D + + +L + + +
Sbjct: 46 KDGSGVFRAAMLYGPPGIGKTTAAHLVAQELGYDILEQNASDVRSKTLLNAGVKNALDNM 105
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain
{Bacteriophage T4 [TaxId: 10665]}
Length = 152
Score = 28.5 bits (62), Expect = 0.25
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 26 RAILLAGQPGTGKTAIAMGLAQ 47
+ IL G PG+GK+ A
Sbjct: 3 KIILTIGCPGSGKSTWAREFIA 24
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain
{Lactobacillus casei [TaxId: 1582]}
Length = 176
Score = 28.7 bits (64), Expect = 0.26
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 23 IAGRAILLAGQPGTGKTAIAMGLAQA 48
I G +L+ G G GK+ A+ L Q
Sbjct: 12 IYGLGVLITGDSGVGKSETALELVQR 37
>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA
{Escherichia coli [TaxId: 562]}
Length = 296
Score = 28.8 bits (63), Expect = 0.28
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 26 RAILLAGQPGTGKTAIAMGLAQAL 49
+ G+ G GKT+I+ A L
Sbjct: 9 PYLFFTGKGGVGKTSISCATAIRL 32
>d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Length = 309
Score = 29.0 bits (64), Expect = 0.30
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 9/54 (16%)
Query: 2 VGQLQARRAAGVV---------LGMIKEGKIAGRAILLAGQPGTGKTAIAMGLA 46
+GQ A+RA + L ++ + IL+ G G GKT IA LA
Sbjct: 17 IGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLA 70
>d2bmfa2 c.37.1.14 (A:178-482) Dengue virus helicase {Dengue virus
type 2 [TaxId: 11060]}
Length = 305
Score = 28.7 bits (63), Expect = 0.32
Identities = 5/27 (18%), Positives = 13/27 (48%), Gaps = 4/27 (14%)
Query: 17 MIKEGKIAGRAILLAGQPGTGKTAIAM 43
+ ++ ++ ++ PG GKT +
Sbjct: 5 IFRKKRL----TIMDLHPGAGKTKRYL 27
>d1r6bx2 c.37.1.20 (X:169-436) ClpA, an Hsp100 chaperone, AAA+
modules {Escherichia coli [TaxId: 562]}
Length = 268
Score = 28.4 bits (63), Expect = 0.39
Identities = 20/50 (40%), Positives = 25/50 (50%)
Query: 28 ILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIYSLEMNKTEEETEM 77
LL G+ G GKTAIA GLA + MA IYSL++ T+
Sbjct: 42 PLLVGESGVGKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKY 91
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus
voltae [TaxId: 2188]}
Length = 190
Score = 28.0 bits (61), Expect = 0.42
Identities = 6/25 (24%), Positives = 11/25 (44%)
Query: 26 RAILLAGQPGTGKTAIAMGLAQALG 50
+ +++ G PG G T + L
Sbjct: 2 KVVVVTGVPGVGSTTSSQLAMDNLR 26
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 180
Score = 28.0 bits (61), Expect = 0.43
Identities = 8/23 (34%), Positives = 11/23 (47%)
Query: 28 ILLAGQPGTGKTAIAMGLAQALG 50
++L G PG GK A L +
Sbjct: 5 MVLIGPPGAGKGTQAPNLQERFH 27
>d1v5wa_ c.37.1.11 (A:) Meiotic recombination protein DMC1/LIM15
homolog {Human (Homo sapiens) [TaxId: 9606]}
Length = 258
Score = 28.2 bits (61), Expect = 0.48
Identities = 7/26 (26%), Positives = 11/26 (42%)
Query: 21 GKIAGRAILLAGQPGTGKTAIAMGLA 46
G + G+ TGKT ++ L
Sbjct: 33 GIESMAITEAFGEFRTGKTQLSHTLC 58
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 181
Score = 27.6 bits (60), Expect = 0.63
Identities = 12/23 (52%), Positives = 15/23 (65%)
Query: 28 ILLAGQPGTGKTAIAMGLAQALG 50
+LL G PG GK A+ LA+ LG
Sbjct: 3 VLLLGPPGAGKGTQAVKLAEKLG 25
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Length = 225
Score = 27.7 bits (60), Expect = 0.64
Identities = 8/23 (34%), Positives = 12/23 (52%)
Query: 28 ILLAGQPGTGKTAIAMGLAQALG 50
I + G G GK + +A+AL
Sbjct: 6 ITIDGPSGAGKGTLCKAMAEALQ 28
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 213
Score = 27.6 bits (60), Expect = 0.67
Identities = 9/39 (23%), Positives = 17/39 (43%)
Query: 28 ILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIYSL 66
I ++G +GK+++ + Q LG + I S
Sbjct: 5 IGVSGGTASGKSSVCAKIVQLLGQNEVDYRQKQVVILSQ 43
>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA
{Escherichia coli [TaxId: 562]}
Length = 279
Score = 27.6 bits (60), Expect = 0.69
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 26 RAILLAGQPGTGKTAIAMGLAQAL 49
I+L G+ G GKT +A +A L
Sbjct: 21 GLIMLMGKGGVGKTTMAAAIAVRL 44
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 186
Score = 27.2 bits (59), Expect = 0.78
Identities = 20/147 (13%), Positives = 46/147 (31%), Gaps = 3/147 (2%)
Query: 26 RAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIYSLEMNKTEEETEMIEGEVVEI 85
R I+++G GTGK+ + L PD+ S++ + ++ + + +
Sbjct: 2 RPIVISGPSGTGKSTLLKKLFAEY-PDSFGFSVSSTTRTPRAGEVNGKDYNFVSVDEFKS 60
Query: 86 QIERPATGLGSKVGKLTMKTTEMETSYDLGAKMIEAIGTAYSSPHGIPIDLLDRMVIIPT 145
I+ ++ +T + + + +
Sbjct: 61 MIKNNEFIEWAQFSGNYYGSTVASVKQVSKSGKTCILDIDMQGVKSVKAIPELNARFLFI 120
Query: 146 QPYQDEEIQAILKIRLVKNERNEIYNH 172
P E+++ L+ R E E N
Sbjct: 121 APPSVEDLKKRLEGR--GTETEESINK 145
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS
kinase) {Fungus (Penicillium chrysogenum) [TaxId:
5076]}
Length = 208
Score = 27.5 bits (60), Expect = 0.80
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 25 GRAILLAGQPGTGKTAIAMGLAQAL 49
G I L G +GK+ +A+ L L
Sbjct: 24 GLTIWLTGLSASGKSTLAVELEHQL 48
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 182
Score = 27.2 bits (59), Expect = 0.81
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 28 ILLAGQPGTGKTAIAMGLAQALG 50
++L G PG GK A + A G
Sbjct: 3 LVLMGLPGAGKGTQAEKIVAAYG 25
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea
mays) [TaxId: 4577]}
Length = 189
Score = 27.2 bits (59), Expect = 0.89
Identities = 4/23 (17%), Positives = 10/23 (43%)
Query: 28 ILLAGQPGTGKTAIAMGLAQALG 50
++++G P +GK +
Sbjct: 6 VMISGAPASGKGTQCELIKTKYQ 28
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase
{Escherichia coli [TaxId: 562]}
Length = 179
Score = 27.2 bits (59), Expect = 0.95
Identities = 8/23 (34%), Positives = 11/23 (47%)
Query: 28 ILLAGQPGTGKTAIAMGLAQALG 50
I+L G P GK A + + G
Sbjct: 3 IILLGAPVAGKGTQAQFIMEKYG 25
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum
[TaxId: 44689]}
Length = 194
Score = 27.2 bits (59), Expect = 0.99
Identities = 6/23 (26%), Positives = 11/23 (47%)
Query: 28 ILLAGQPGTGKTAIAMGLAQALG 50
+ + G PG+GK + + G
Sbjct: 9 VFVLGGPGSGKGTQCANIVRDFG 31
>d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia coli
[TaxId: 562]}
Length = 222
Score = 27.3 bits (59), Expect = 1.0
Identities = 17/154 (11%), Positives = 39/154 (25%), Gaps = 13/154 (8%)
Query: 29 LLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIYS-------------LEMNKTEEET 75
L+G G GK+ AL PD + L+
Sbjct: 28 TLSGGNGAGKSTTMAAFVTALIPDLTLLHFRNTTEAGATSGSRDKGLHGKLKAGVCYSML 87
Query: 76 EMIEGEVVEIQIERPATGLGSKVGKLTMKTTEMETSYDLGAKMIEAIGTAYSSPHGIPID 135
+ I + + + + K+ +K ++ T +
Sbjct: 88 DTINSRHQRVVVGVRLQQVAGRDRKVDIKPFAIQGLPMSVQPTQLVTETLNERQARVLPL 147
Query: 136 LLDRMVIIPTQPYQDEEIQAILKIRLVKNERNEI 169
+ + + Q ++ +I + + I
Sbjct: 148 NELKDKLEAMEGVQFKQFNSITDYHSLMFDLGII 181
>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium
pasteurianum [TaxId: 1501]}
Length = 269
Score = 27.2 bits (59), Expect = 1.0
Identities = 7/24 (29%), Positives = 11/24 (45%)
Query: 26 RAILLAGQPGTGKTAIAMGLAQAL 49
R + + G+ G GK+ L L
Sbjct: 2 RQVAIYGKGGIGKSTTTQNLTSGL 25
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId:
9606]}
Length = 170
Score = 26.8 bits (58), Expect = 1.1
Identities = 12/60 (20%), Positives = 24/60 (40%), Gaps = 8/60 (13%)
Query: 28 ILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIYSLEMNKTEEETEMIEGEVVEIQI 87
++L G G GKT + + F S G + + + ++G V++Q+
Sbjct: 9 VMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVL--------DVDGVKVKLQM 60
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus
globisporus [TaxId: 1459]}
Length = 182
Score = 26.8 bits (58), Expect = 1.3
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 28 ILLAGQPGTGKTAIAMGLAQALG 50
I+L G PG GK A + + G
Sbjct: 3 IVLMGLPGAGKGTQADRIVEKYG 25
>d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter
vinelandii [TaxId: 354]}
Length = 289
Score = 26.8 bits (58), Expect = 1.3
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 24 AGRAILLAGQPGTGKTAIAMGLAQAL 49
A R + G+ G GK+ L AL
Sbjct: 1 AMRQCAIYGKGGIGKSTTTQNLVAAL 26
>d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus
influenzae [TaxId: 727]}
Length = 158
Score = 26.6 bits (58), Expect = 1.3
Identities = 11/40 (27%), Positives = 16/40 (40%)
Query: 18 IKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGPDTPFTS 57
+K + L G G GKT + G+ Q +G S
Sbjct: 26 LKLHTEKAIMVYLNGDLGAGKTTLTRGMLQGIGHQGNVKS 65
>d1u0ja_ c.37.1.20 (A:) Rep 40 protein helicase domain
{Adeno-associated virus 2, AAV2 [TaxId: 10804]}
Length = 267
Score = 26.8 bits (59), Expect = 1.4
Identities = 13/38 (34%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Query: 14 VLGMIKEGKIAGR-AILLAGQPGTGKTAIAMGLAQALG 50
V K R I L G TGKT IA +A +
Sbjct: 92 VFLGWATKKFGKRNTIWLFGPATTGKTNIAEAIAHTVP 129
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor
beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Length = 207
Score = 26.5 bits (57), Expect = 1.6
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 26 RAILLAGQPGTGKTAI 41
RA+L G +GKT +
Sbjct: 1 RAVLFVGLCDSGKTLL 16
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae
[TaxId: 1313]}
Length = 223
Score = 26.5 bits (57), Expect = 1.6
Identities = 7/23 (30%), Positives = 13/23 (56%)
Query: 28 ILLAGQPGTGKTAIAMGLAQALG 50
I + G +GK+ +A +A+ G
Sbjct: 6 IAIDGPASSGKSTVAKIIAKDFG 28
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 286
Score = 26.7 bits (58), Expect = 1.6
Identities = 6/22 (27%), Positives = 12/22 (54%)
Query: 28 ILLAGQPGTGKTAIAMGLAQAL 49
I +G G+GK+ ++ + L
Sbjct: 30 IFFSGPQGSGKSFTSIQIYNHL 51
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 196
Score = 26.5 bits (57), Expect = 1.7
Identities = 7/23 (30%), Positives = 9/23 (39%)
Query: 28 ILLAGQPGTGKTAIAMGLAQALG 50
I + G PG GK L +
Sbjct: 11 IFVLGGPGAGKGTQCEKLVKDYS 33
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus
acidocaldarius [TaxId: 2285]}
Length = 194
Score = 26.5 bits (57), Expect = 1.7
Identities = 6/23 (26%), Positives = 12/23 (52%)
Query: 28 ILLAGQPGTGKTAIAMGLAQALG 50
++ G PG GK+ + + + L
Sbjct: 4 GIVTGIPGVGKSTVLAKVKEILD 26
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos
taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Length = 190
Score = 26.4 bits (57), Expect = 1.7
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 28 ILLAGQPGTGKTAIAMGLAQALG 50
+L G PG GK A LA+
Sbjct: 6 AVLLGPPGAGKGTQAPKLAKNFC 28
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain
{Caenorhabditis elegans [TaxId: 6239]}
Length = 277
Score = 26.7 bits (58), Expect = 1.8
Identities = 7/26 (26%), Positives = 14/26 (53%)
Query: 17 MIKEGKIAGRAILLAGQPGTGKTAIA 42
+ + + + L G+ G+GK+ IA
Sbjct: 36 LDEMCDLDSFFLFLHGRAGSGKSVIA 61
>d1ny5a2 c.37.1.20 (A:138-384) Transcriptional activator sigm54
(NtrC1), C-terminal domain {Aquifex aeolicus [TaxId:
63363]}
Length = 247
Score = 26.4 bits (58), Expect = 1.8
Identities = 12/72 (16%), Positives = 25/72 (34%), Gaps = 3/72 (4%)
Query: 1 MVGQLQARRAAGVVLGMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAG 60
V + + +L IK+ A +L+ G+ G GK +A + +
Sbjct: 2 YVFESPKMKE---ILEKIKKISCAECPVLITGESGVGKEVVARLIHKLSDRSKEPFVALN 58
Query: 61 SEIYSLEMNKTE 72
++ + E
Sbjct: 59 VASIPRDIFEAE 70
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos
taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Length = 189
Score = 26.3 bits (57), Expect = 1.8
Identities = 5/23 (21%), Positives = 11/23 (47%)
Query: 28 ILLAGQPGTGKTAIAMGLAQALG 50
+ G PG+GK ++ + +
Sbjct: 9 AAIMGAPGSGKGTVSSRITKHFE 31
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARL1 [TaxId: 9606]}
Length = 169
Score = 26.2 bits (56), Expect = 1.9
Identities = 10/25 (40%), Positives = 13/25 (52%), Gaps = 5/25 (20%)
Query: 17 MIKEGKIAGRAILLAGQPGTGKTAI 41
M +E +I L+ G G GKT I
Sbjct: 2 MTREMRI-----LILGLDGAGKTTI 21
>d2jdid3 c.37.1.11 (D:82-357) Central domain of beta subunit of F1
ATP synthase {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 276
Score = 26.2 bits (58), Expect = 2.0
Identities = 13/55 (23%), Positives = 22/55 (40%), Gaps = 5/55 (9%)
Query: 25 GRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIYSLEMNKTEEETEMIE 79
G I L G G GKT + M L + + G +++ +T E ++
Sbjct: 68 GGKIGLFGGAGVGKTVLIMELINNVA-----KAHGGYSVFAGVGERTREGNDLYH 117
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein
Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Length = 178
Score = 26.1 bits (56), Expect = 2.1
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 28 ILLAGQPGTGKTAIAMGLAQALGPDT 53
I++ G+PG GKT + + + LG
Sbjct: 3 IIITGEPGVGKTTLVKKIVERLGKRA 28
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 194
Score = 26.1 bits (56), Expect = 2.2
Identities = 6/23 (26%), Positives = 10/23 (43%)
Query: 28 ILLAGQPGTGKTAIAMGLAQALG 50
+ + G PG GK + + G
Sbjct: 4 VFVLGGPGAGKGTQCARIVEKYG 26
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 25.9 bits (56), Expect = 2.3
Identities = 17/60 (28%), Positives = 25/60 (41%), Gaps = 9/60 (15%)
Query: 28 ILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIYSLEMNKTEEETEMIEGEVVEIQI 87
I+L G G GKT + Q L P ++ G + + I GE V++QI
Sbjct: 8 IVLIGNAGVGKTCLVRRFTQGLFPPGQGATI-GVDFMIKTVE--------INGEKVKLQI 58
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 190
Score = 26.1 bits (56), Expect = 2.4
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 26 RAILLAGQPGTGKTAIAMGLAQALGPDTPF 55
R ++L+G G GK+ + L Q F
Sbjct: 1 RPVVLSGPSGAGKSTLLKKLFQEHSSIFGF 30
>d1wp9a1 c.37.1.19 (A:1-200) putative ATP-dependent RNA helicase
PF2015 {Pyrococcus furiosus [TaxId: 2261]}
Length = 200
Score = 25.9 bits (55), Expect = 2.7
Identities = 9/22 (40%), Positives = 10/22 (45%)
Query: 22 KIAGRAILLAGQPGTGKTAIAM 43
K L+ G GKT IAM
Sbjct: 20 KCKETNCLIVLPTGLGKTLIAM 41
>d1jbka_ c.37.1.20 (A:) ClpB, AAA+ modules {Escherichia coli
[TaxId: 562]}
Length = 195
Score = 25.6 bits (56), Expect = 2.8
Identities = 16/44 (36%), Positives = 23/44 (52%)
Query: 25 GRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIYSLEM 68
+L G+PG GKTAI GLAQ + + G + +L+M
Sbjct: 43 KNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDM 86
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId:
9823]}
Length = 194
Score = 25.7 bits (55), Expect = 2.8
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 26 RAILLAGQPGTGKTAIAMGLAQALG 50
+ I + G PG+GK + Q G
Sbjct: 9 KIIFVVGGPGSGKGTQCEKIVQKYG 33
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Length = 174
Score = 25.7 bits (55), Expect = 3.0
Identities = 25/134 (18%), Positives = 39/134 (29%), Gaps = 3/134 (2%)
Query: 28 ILLAGQPGTGKTAIAMGLAQ-ALGPDTPFTSMAGSEIYSLE-MNKTEEETEMIEGEVVEI 85
++L G G GK+++ T LE
Sbjct: 9 VILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQERF 68
Query: 86 QIERPATGLGSKVGKLTMKTTEMETSYDLGAKMIEAIGTAYS-SPHGIPIDLLDRMVIIP 144
+ R GS LT + ++ +L E I A P P +L + I
Sbjct: 69 RSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKIDIS 128
Query: 145 TQPYQDEEIQAILK 158
+ EE QA +
Sbjct: 129 ERQVSTEEAQAWCR 142
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 173
Score = 25.1 bits (54), Expect = 3.7
Identities = 14/60 (23%), Positives = 26/60 (43%), Gaps = 9/60 (15%)
Query: 28 ILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIYSLEMNKTEEETEMIEGEVVEIQI 87
+LL G G GKT + ++ T F S G + + ++G+ +++QI
Sbjct: 9 LLLIGDSGVGKTCVLFRFSEDAFNST-FISTIGIDFKIRTIE--------LDGKRIKLQI 59
>d1uaaa1 c.37.1.19 (A:2-307) DEXX box DNA helicase {Escherichia
coli, RepD [TaxId: 562]}
Length = 306
Score = 25.5 bits (54), Expect = 4.2
Identities = 9/27 (33%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Query: 23 IAGRAILLAGQPGTGKTAIAMGLAQAL 49
+ G ++LAG G+GKT + L
Sbjct: 13 VTGPCLVLAG-AGSGKTRVITNKIAHL 38
>d2isya2 a.76.1.1 (A:65-140) Iron-dependent regulator {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 76
Score = 24.0 bits (52), Expect = 4.3
Identities = 8/28 (28%), Positives = 15/28 (53%)
Query: 107 EMETSYDLGAKMIEAIGTAYSSPHGIPI 134
E S D+ ++++ + +SP G PI
Sbjct: 41 EHVMSEDVERRLVKVLNNPTTSPFGNPI 68
>d2hhma_ e.7.1.1 (A:) Inositol monophosphatase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 272
Score = 25.4 bits (54), Expect = 4.4
Identities = 10/45 (22%), Positives = 16/45 (35%)
Query: 115 GAKMIEAIGTAYSSPHGIPIDLLDRMVIIPTQPYQDEEIQAILKI 159
++ G G P DL+ R VI E I +++
Sbjct: 220 AGIIVTEAGGVLMDVTGGPFDLMSRRVIAANNRILAERIAKEIQV 264
>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli
[TaxId: 562]}
Length = 224
Score = 25.0 bits (53), Expect = 4.8
Identities = 7/25 (28%), Positives = 10/25 (40%), Gaps = 1/25 (4%)
Query: 26 RAILLAG-QPGTGKTAIAMGLAQAL 49
+ + G GKT + L QA
Sbjct: 2 KRYFVTGTDTEVGKTVASCALLQAA 26
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium
extorquens [TaxId: 408]}
Length = 323
Score = 25.2 bits (54), Expect = 5.1
Identities = 20/155 (12%), Positives = 44/155 (28%), Gaps = 1/155 (0%)
Query: 3 GQLQARRAAGVVLGMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQAL-GPDTPFTSMAGS 61
+ R A ++ + + + G PG GK+ L L +A
Sbjct: 29 RRADHRAAVRDLIDAVLPQTGRAIRVGITGVPGVGKSTTIDALGSLLTAAGHKVAVLAVD 88
Query: 62 EIYSLEMNKTEEETEMIEGEVVEIQIERPATGLGSKVGKLTMKTTEMETSYDLGAKMIEA 121
+ + + ++ + +G + KT E + +
Sbjct: 89 PSSTRTGGSILGDKTRMARLAIDRNAFIRPSPSSGTLGGVAAKTRETMLLCEAAGFDVIL 148
Query: 122 IGTAYSSPHGIPIDLLDRMVIIPTQPYQDEEIQAI 156
+ T + L ++ P +E+Q I
Sbjct: 149 VETVGVGQSETAVADLTDFFLVLMLPGAGDELQGI 183
>d1eg7a_ c.37.1.10 (A:) Formyltetrahydrofolate synthetase
{Moorella thermoacetica [TaxId: 1525]}
Length = 549
Score = 25.2 bits (55), Expect = 5.2
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 35 GTGKTAIAMGLAQALG 50
G GKT ++GL AL
Sbjct: 65 GEGKTTTSVGLTDALA 80
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli
[TaxId: 562]}
Length = 308
Score = 25.1 bits (54), Expect = 5.5
Identities = 8/27 (29%), Positives = 10/27 (37%)
Query: 28 ILLAGQPGTGKTAIAMGLAQALGPDTP 54
I +AG GK+ A L L
Sbjct: 83 ISIAGSVAVGKSTTARVLQALLSRWPE 109
>d2jdia3 c.37.1.11 (A:95-379) Central domain of alpha subunit of F1
ATP synthase {Cow (Bos taurus) [TaxId: 9913]}
Length = 285
Score = 24.8 bits (54), Expect = 6.5
Identities = 10/61 (16%), Positives = 20/61 (32%), Gaps = 1/61 (1%)
Query: 25 GRAILLAGQPGTGKTAIAMGLAQALGPDTPFTSMAGSEIYS-LEMNKTEEETEMIEGEVV 83
G+ L+ G TGKT+IA+ T + + + + +
Sbjct: 68 GQRELIIGDRQTGKTSIAIDTIINQKRFNDGTDEKKKLYCIYVAIGQKRSTVAQLVKRLT 127
Query: 84 E 84
+
Sbjct: 128 D 128
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId:
9606]}
Length = 186
Score = 24.5 bits (52), Expect = 7.4
Identities = 12/65 (18%), Positives = 17/65 (26%), Gaps = 1/65 (1%)
Query: 28 ILLAGQPGTGKTAIAMGLAQ-ALGPDTPFTSMAGSEIYSLEMNKTEEETEMIEGEVVEIQ 86
+L G G GKT P T + N + V +Q
Sbjct: 8 LLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKVHLQ 67
Query: 87 IERPA 91
+ A
Sbjct: 68 LWDTA 72
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34
{Garden pea (Pisum sativum) [TaxId: 3888]}
Length = 257
Score = 24.4 bits (52), Expect = 9.9
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 14 VLGMIKEGKIAGRAILLAGQPGTGKTAI 41
+LG +K+ + IL+ G+ G GK++
Sbjct: 21 LLGNLKQEDVNSLTILVMGKGGVGKSST 48
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.313 0.133 0.360
Gapped
Lambda K H
0.267 0.0444 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 619,291
Number of extensions: 27985
Number of successful extensions: 277
Number of sequences better than 10.0: 1
Number of HSP's gapped: 277
Number of HSP's successfully gapped: 118
Length of query: 174
Length of database: 2,407,596
Length adjustment: 79
Effective length of query: 95
Effective length of database: 1,322,926
Effective search space: 125677970
Effective search space used: 125677970
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 50 (23.8 bits)