Query psy14622
Match_columns 788
No_of_seqs 264 out of 2388
Neff 5.2
Searched_HMMs 46136
Date Fri Aug 16 16:26:49 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14622.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/14622hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0356|consensus 100.0 3E-110 7E-115 920.3 33.1 468 7-786 37-506 (550)
2 PLN03167 Chaperonin-60 beta su 100.0 1.5E-96 3E-101 850.5 44.6 470 6-786 78-550 (600)
3 PRK14104 chaperonin GroEL; Pro 100.0 9.8E-95 2.1E-99 829.3 46.6 470 7-786 24-494 (546)
4 PRK12852 groEL chaperonin GroE 100.0 1.6E-94 3.5E-99 828.0 47.6 471 6-786 23-494 (545)
5 PTZ00114 Heat shock protein 60 100.0 1.1E-92 2.3E-97 814.3 47.9 472 6-786 34-509 (555)
6 CHL00093 groEL chaperonin GroE 100.0 1.4E-91 3E-96 801.3 46.1 469 7-786 23-494 (529)
7 TIGR02348 GroEL chaperonin Gro 100.0 5.7E-90 1.2E-94 787.2 47.4 470 7-786 22-491 (524)
8 PRK12850 groEL chaperonin GroE 100.0 8.1E-90 1.7E-94 788.7 46.1 470 7-786 24-493 (544)
9 PRK12851 groEL chaperonin GroE 100.0 1E-89 2.2E-94 787.4 46.3 470 7-786 24-493 (541)
10 PRK00013 groEL chaperonin GroE 100.0 1.6E-89 3.6E-94 785.5 47.2 471 6-786 22-493 (542)
11 PRK12849 groEL chaperonin GroE 100.0 4.5E-89 9.7E-94 782.0 47.4 471 6-786 22-492 (542)
12 cd03344 GroEL GroEL_like type 100.0 5.5E-88 1.2E-92 770.1 48.0 471 6-786 20-490 (520)
13 COG0459 GroL Chaperonin GroEL 100.0 1.5E-81 3.2E-86 714.8 22.4 449 6-786 23-483 (524)
14 cd03338 TCP1_delta TCP-1 (CTT 100.0 9.8E-65 2.1E-69 578.4 35.0 430 6-786 20-485 (515)
15 cd03342 TCP1_zeta TCP-1 (CTT o 100.0 1.7E-64 3.6E-69 572.9 31.5 410 6-786 24-452 (484)
16 cd03343 cpn60 cpn60 chaperonin 100.0 3.4E-63 7.3E-68 565.9 36.0 417 6-786 27-486 (517)
17 TIGR02345 chap_CCT_eta T-compl 100.0 1.2E-64 2.5E-69 579.0 21.3 419 6-786 30-489 (522)
18 TIGR02346 chap_CCT_theta T-com 100.0 9.2E-63 2E-67 564.3 33.4 424 6-786 30-489 (531)
19 TIGR02340 chap_CCT_alpha T-com 100.0 3E-62 6.5E-67 560.7 35.8 423 6-786 24-499 (536)
20 TIGR02342 chap_CCT_delta T-com 100.0 2.2E-62 4.8E-67 559.6 34.6 431 6-786 21-486 (517)
21 cd03339 TCP1_epsilon TCP-1 (CT 100.0 1.1E-62 2.3E-67 563.2 31.7 429 6-786 35-497 (526)
22 TIGR02339 thermosome_arch ther 100.0 5.4E-62 1.2E-66 556.5 35.5 418 6-786 28-489 (519)
23 TIGR02347 chap_CCT_zeta T-comp 100.0 8.3E-62 1.8E-66 556.3 33.7 414 6-786 28-495 (531)
24 cd03335 TCP1_alpha TCP-1 (CTT 100.0 3.3E-61 7.2E-66 551.0 36.4 424 6-786 20-495 (527)
25 TIGR02343 chap_CCT_epsi T-comp 100.0 2.1E-61 4.5E-66 553.3 32.7 428 7-786 40-501 (532)
26 PTZ00212 T-complex protein 1 s 100.0 2.9E-62 6.3E-67 560.5 23.0 412 6-786 34-495 (533)
27 TIGR02341 chap_CCT_beta T-comp 100.0 1.3E-60 2.8E-65 545.3 22.0 418 6-786 26-484 (519)
28 cd03341 TCP1_theta TCP-1 (CTT 100.0 8.1E-59 1.8E-63 525.1 34.8 402 6-786 20-441 (472)
29 cd03336 TCP1_beta TCP-1 (CTT o 100.0 4.2E-60 9E-65 540.9 24.2 407 6-786 25-483 (517)
30 cd00309 chaperonin_type_I_II c 100.0 3.8E-58 8.2E-63 517.8 37.2 396 6-786 20-435 (464)
31 TIGR02344 chap_CCT_gamma T-com 100.0 1.3E-57 2.9E-62 521.1 34.5 418 6-786 28-491 (525)
32 cd03340 TCP1_eta TCP-1 (CTT or 100.0 3.1E-57 6.8E-62 517.7 36.1 416 6-786 28-489 (522)
33 cd03337 TCP1_gamma TCP-1 (CTT 100.0 4.3E-57 9.4E-62 511.9 32.9 402 6-786 28-450 (480)
34 PF00118 Cpn60_TCP1: TCP-1/cpn 100.0 2.6E-54 5.5E-59 485.4 34.5 414 7-786 2-453 (485)
35 KOG0358|consensus 100.0 2.5E-36 5.4E-41 321.7 21.6 442 7-786 39-503 (534)
36 KOG0359|consensus 100.0 2.4E-36 5.1E-41 326.2 18.5 439 8-786 31-484 (520)
37 KOG0356|consensus 100.0 7.3E-38 1.6E-42 347.0 3.3 394 229-759 15-427 (550)
38 KOG0360|consensus 100.0 2.4E-35 5.1E-40 321.3 21.7 432 7-786 32-505 (545)
39 KOG0363|consensus 100.0 4.2E-35 9.1E-40 311.1 19.4 437 5-786 29-488 (527)
40 KOG0361|consensus 100.0 3.1E-34 6.6E-39 306.2 22.4 417 6-786 32-492 (543)
41 KOG0362|consensus 100.0 3.9E-28 8.5E-33 266.6 29.2 417 7-786 39-490 (537)
42 KOG0364|consensus 99.9 5.1E-25 1.1E-29 239.1 18.6 418 7-786 32-490 (527)
43 PLN03167 Chaperonin-60 beta su 99.9 1.7E-27 3.7E-32 276.6 -1.1 391 224-758 50-466 (600)
44 PRK14104 chaperonin GroEL; Pro 99.9 1E-25 2.2E-30 259.7 2.3 387 230-758 3-412 (546)
45 PRK12852 groEL chaperonin GroE 99.9 2.6E-24 5.7E-29 248.2 5.7 390 230-758 3-412 (545)
46 CHL00093 groEL chaperonin GroE 99.9 1.1E-24 2.4E-29 250.4 2.0 379 230-758 2-411 (529)
47 KOG0357|consensus 99.9 1.2E-22 2.6E-27 215.3 15.0 206 482-786 149-365 (400)
48 PRK00013 groEL chaperonin GroE 99.9 4.7E-23 1E-27 237.5 5.1 380 230-758 2-411 (542)
49 TIGR02348 GroEL chaperonin Gro 99.9 8E-23 1.7E-27 234.9 4.9 384 231-758 2-410 (524)
50 PRK12850 groEL chaperonin GroE 99.9 1.6E-22 3.4E-27 233.3 4.7 389 230-758 3-412 (544)
51 PTZ00114 Heat shock protein 60 99.9 2E-22 4.3E-27 233.1 3.9 381 230-758 14-424 (555)
52 PRK12849 groEL chaperonin GroE 99.8 3.5E-22 7.6E-27 230.4 5.0 390 230-758 2-411 (542)
53 PRK12851 groEL chaperonin GroE 99.8 1.1E-21 2.5E-26 226.1 5.0 387 230-758 3-412 (541)
54 cd03344 GroEL GroEL_like type 99.8 8.4E-21 1.8E-25 218.1 6.4 387 231-758 1-409 (520)
55 cd03333 chaperonin_like chaper 99.8 4.7E-18 1E-22 173.0 16.8 192 386-654 3-209 (209)
56 COG0459 GroL Chaperonin GroEL 99.8 6.1E-20 1.3E-24 210.6 2.0 156 230-418 3-175 (524)
57 TIGR02342 chap_CCT_delta T-com 99.0 1.5E-11 3.3E-16 141.8 -2.4 198 239-475 10-236 (517)
58 cd03338 TCP1_delta TCP-1 (CTT 99.0 5.3E-11 1.2E-15 137.2 1.1 148 239-418 9-175 (515)
59 cd00309 chaperonin_type_I_II c 98.9 7E-11 1.5E-15 134.4 -2.0 154 232-417 2-174 (464)
60 cd03334 Fab1_TCP TCP-1 like do 98.9 3E-08 6.5E-13 105.5 15.3 174 423-655 56-254 (261)
61 TIGR02345 chap_CCT_eta T-compl 98.9 1.5E-11 3.2E-16 142.1 -10.7 147 238-416 18-185 (522)
62 cd03340 TCP1_eta TCP-1 (CTT or 98.9 3E-10 6.5E-15 131.3 -1.0 247 244-539 22-305 (522)
63 TIGR02346 chap_CCT_theta T-com 98.8 5E-10 1.1E-14 129.8 0.3 195 239-472 19-239 (531)
64 cd03343 cpn60 cpn60 chaperonin 98.7 5.5E-10 1.2E-14 128.9 -4.8 154 232-417 9-181 (517)
65 cd03342 TCP1_zeta TCP-1 (CTT o 98.7 8.4E-10 1.8E-14 126.6 -3.7 151 235-417 9-179 (484)
66 TIGR02340 chap_CCT_alpha T-com 98.5 4.2E-09 9E-14 122.3 -4.1 157 232-420 6-185 (536)
67 TIGR02339 thermosome_arch ther 98.5 5.9E-09 1.3E-13 120.6 -3.8 157 232-420 10-189 (519)
68 cd03339 TCP1_epsilon TCP-1 (CT 98.4 1.1E-08 2.3E-13 118.6 -5.8 208 232-473 17-248 (526)
69 cd03335 TCP1_alpha TCP-1 (CTT 98.4 1.7E-08 3.7E-13 117.0 -4.2 148 236-415 6-173 (527)
70 PTZ00212 T-complex protein 1 s 98.4 1.1E-08 2.4E-13 118.8 -6.2 128 233-392 17-166 (533)
71 TIGR02347 chap_CCT_zeta T-comp 98.3 6.1E-08 1.3E-12 112.7 -3.7 150 237-418 15-184 (531)
72 cd03336 TCP1_beta TCP-1 (CTT o 98.2 9.4E-08 2E-12 110.7 -4.9 149 233-411 8-178 (517)
73 TIGR02341 chap_CCT_beta T-comp 98.1 1.3E-07 2.8E-12 109.6 -5.7 134 234-397 10-160 (519)
74 TIGR02343 chap_CCT_epsi T-comp 98.0 1.9E-07 4E-12 108.7 -5.6 207 233-473 22-252 (532)
75 TIGR02344 chap_CCT_gamma T-com 98.0 6.1E-07 1.3E-11 104.2 -3.3 152 236-417 14-182 (525)
76 cd03341 TCP1_theta TCP-1 (CTT 97.8 1.6E-06 3.5E-11 99.5 -3.2 147 242-421 12-181 (472)
77 cd03337 TCP1_gamma TCP-1 (CTT 97.8 8.2E-07 1.8E-11 102.1 -5.7 150 237-416 15-181 (480)
78 PF00118 Cpn60_TCP1: TCP-1/cpn 97.3 2.6E-05 5.7E-10 88.8 -3.0 135 251-416 2-153 (485)
79 cd03333 chaperonin_like chaper 96.3 0.0028 6.1E-08 64.9 3.2 92 127-257 2-139 (209)
80 KOG0363|consensus 94.1 0.011 2.3E-07 65.5 -0.8 190 244-471 24-239 (527)
81 KOG0361|consensus 91.4 0.24 5.1E-06 55.6 4.7 124 270-414 59-187 (543)
82 KOG0359|consensus 74.0 1.5 3.3E-05 50.1 1.3 61 173-257 266-326 (520)
83 KOG0358|consensus 73.6 1.4 3E-05 49.7 0.9 157 270-459 65-243 (534)
84 KOG3633|consensus 63.0 98 0.0021 32.1 11.2 123 584-715 51-216 (219)
85 KOG0364|consensus 50.3 16 0.00035 42.2 3.7 73 270-355 58-133 (527)
86 KOG0230|consensus 44.6 57 0.0012 43.0 7.6 181 428-667 374-580 (1598)
87 PRK14736 atpC F0F1 ATP synthas 34.1 1.1E+02 0.0024 29.9 6.3 51 569-619 70-126 (133)
88 TIGR00255 conserved hypothetic 33.3 93 0.002 34.5 6.2 67 681-758 151-223 (291)
89 PRK13600 putative ribosomal pr 25.2 1.5E+02 0.0033 27.0 5.1 52 482-543 23-74 (84)
90 KOG0357|consensus 24.9 65 0.0014 36.4 3.2 181 7-257 41-243 (400)
91 PF10805 DUF2730: Protein of u 23.7 1.1E+02 0.0025 28.7 4.2 37 586-622 46-82 (106)
92 PF03592 Terminase_2: Terminas 23.0 2E+02 0.0043 27.9 6.0 62 645-722 16-77 (144)
93 TIGR01216 ATP_synt_epsi ATP sy 22.0 2.5E+02 0.0055 27.1 6.4 36 582-617 87-122 (130)
94 PF04316 FlgM: Anti-sigma-28 f 21.9 1.4E+02 0.0029 24.9 3.9 30 689-718 26-55 (57)
95 PRK11820 hypothetical protein; 21.3 2.4E+02 0.0053 31.2 6.8 66 681-758 149-220 (288)
No 1
>KOG0356|consensus
Probab=100.00 E-value=3.3e-110 Score=920.33 Aligned_cols=468 Identities=73% Similarity=1.068 Sum_probs=455.3
Q ss_pred eeccCCCCCcCCCCceeeeecCCCCceEeeChHHhhccccccccccChhhHHHHHHhhhcccccCCCchhHHHHHHHHHH
Q psy14622 7 EQSWGSPKITKDDGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIAK 86 (788)
Q Consensus 7 ~~~~~S~kiLGPkG~nkmI~~~~G~~~ITnDGvTIlk~I~l~d~~ehpgAkLl~e~A~~qd~evGDGTTTavVLA~aLL~ 86 (788)
++..+++ +||+|||++|.+++|.|+|||||+|++++++|.|+++|.||++++++++++|+.+||||||+++||++|..
T Consensus 37 adav~~T--lgpKgrnViieq~~gsPkvtkdgvTva~si~l~d~~~n~gaklvq~va~~tN~~agdGtttatvlar~i~~ 114 (550)
T KOG0356|consen 37 ADAVAVT--LGPKGRNVIIEQSWGSPKVTKDGVTVAKSIELKDKYENIGAKLVQDVANNTNEEAGDGTTTATVLARAIAK 114 (550)
T ss_pred HHHhhhh--ccCCcceEEcccccCCCceecCCceeeccccccchhhhhccHHHHHHHhhccCccccCcchHHHHHHHHHH
Confidence 4456666 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHhccCCchHHhhHHHHHHHHhhhccccccceee
Q psy14622 87 EGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVTTPEEIAQVATISANGDKAVGELISDAMKRVSAKVEFQDALVL 166 (788)
Q Consensus 87 eglklI~~Gi~P~~I~~Gi~~A~~~ile~L~~ls~~V~d~eeL~~VA~tSan~d~~Ig~LIadAv~kV~~~~e~~d~~IL 166 (788)
+|++.+++|.+|++|++|+.+|++.+.+.|+++++||++.+++.+||++|+|+|.++|++|++||.+
T Consensus 115 eg~~~v~~G~npv~irrGi~~av~~vv~~L~k~sk~Vtt~eeIaqVAtiSAngD~~ig~li~~a~~k------------- 181 (550)
T KOG0356|consen 115 EGFEKVAKGANPVEIRRGIMLAVDAVVDELKKMSKPVTTPEEIAQVATISANGDKEIGNLISDAMKK------------- 181 (550)
T ss_pred HHHHHHhccCCchhhhhhHHHHHHHHHHHHHHhCCCCCCHHHHHHHHhhhcCCcHHHHHHHHHHHHH-------------
Confidence 9999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred eccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhcccccccccccccccccCCCccccccccc
Q psy14622 167 LSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRFGPEVRGLMLQG 246 (788)
Q Consensus 167 ite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~~~~~~~r~~~L~~ 246 (788)
T Consensus 182 -------------------------------------------------------------------------------- 181 (550)
T KOG0356|consen 182 -------------------------------------------------------------------------------- 181 (550)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeecccccccCcccccccccccccccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeeccccCCcceeeEeee
Q psy14622 247 VDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVVG 326 (788)
Q Consensus 247 ~~i~~~~~~~tp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 326 (788)
T Consensus 182 -------------------------------------------------------------------------------- 181 (550)
T KOG0356|consen 182 -------------------------------------------------------------------------------- 181 (550)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccccCCCCCchhhhhhhhhHHHHHHHH
Q psy14622 327 KEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFIIELKLVLEYYIQTY 406 (788)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (788)
T Consensus 182 -------------------------------------------------------------------------------- 181 (550)
T KOG0356|consen 182 -------------------------------------------------------------------------------- 181 (550)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhhccCCCCcEEEecCCccceeEEEEEeeEecccccccccccccCCceeEeccceeecccccccchhhhHHHHHHHHh
Q psy14622 407 IYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESKISSIQSIIPALELANS 486 (788)
Q Consensus 407 ~~~~~kvG~dGvItveeg~~~~~~lev~eG~~fd~GylSpyfvt~~e~~~v~l~~p~ILitD~kI~~i~~IlP~Le~~~~ 486 (788)
||++|+|++++|++++|+++++|||+|||||+||||+|++++++++|++|++|++++||+++++|+|+||.+.+
T Consensus 182 ------vG~~GVItv~~gkt~~delev~eGmkfdrGyiSPyfi~~~k~~~~e~e~~~~ll~~kki~~v~~ivp~LE~A~~ 255 (550)
T KOG0356|consen 182 ------VGRKGVITVKDGKTLEDELEVIEGMKFDRGYISPYFITSSKKQKVEFENALLLLSEKKISSVQSIVPALELALA 255 (550)
T ss_pred ------hCcCCeEEeecCCccccchhhhhcccccccccCccccccchhhhhhhhhhhhhhhhhhhhHHHHHhHHHHHhhh
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCeEEEecCCChhhHHhHHhhhcccccceeeecCCCCcchhhhhhhhhHhhhCCeEeccCCCC-CcccccCcccccce
Q psy14622 487 KRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATLQDLAVATGGIVFGDEASP-VKLEDLQATDLGSV 565 (788)
Q Consensus 487 ~~rpLLIIAedi~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~~~LeDiAilTGg~vis~~~~g-~~l~~v~~~~LG~a 565 (788)
..+|||||||||++|||++|++|++++.++|||||+|||||+|++.|+|||++|||+++.++ .+ ++|+++++++||.+
T Consensus 256 ~~~PLliIAeDi~~eaL~tLIlNkLk~glqV~AvKapgfGdnrk~~l~Diai~Tg~~v~~~e-~~~l~le~~~~~dLG~~ 334 (550)
T KOG0356|consen 256 KRRPLLIIAEDIDGEALATLVLNKLKGGLQVVAVKAPGFGDNRKNLLKDIAILTGATVFGEE-LSTLNLEDAKLEDLGEV 334 (550)
T ss_pred ccCceEEEehhcchhHHHHHHhhhhccceeEEEEecCCCcchHHHhhhHHHHHhhhhhhccc-hhhcccccCchhhcCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999 55 89999999999999
Q ss_pred eEEEEecCceEEEcCCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHhhcCCeEEEEecCCchhhHHHHHHHHHHHH
Q psy14622 566 GEIVITKDDTLILKGKGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSEVEVNEKKDRVTDAL 645 (788)
Q Consensus 566 ~~V~vt~d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~~~~~~L~eRla~LsggvAvI~VGG~Te~EikErk~r~edAl 645 (788)
.+|++|+|+|+++.|.+++++++.||+|++.+++.+.++|++++|+||+++|+||+|+|+|||.||+|++|||+|++|||
T Consensus 335 ~evvvtkd~t~ll~g~~~~~~v~~rIeqik~~~e~t~~~ye~ekl~er~a~ls~gvavi~vGg~se~Ev~ekk~rv~dal 414 (550)
T KOG0356|consen 335 GEVVVTKDDTMLLKGKGNKAQVEGRIEQIKEMIEETTSDYEKEKLNERLAKLSGGVAVIKVGGHSEVEVNEKKDRVEDAL 414 (550)
T ss_pred eeEEEecCcceeeCCCCCHHHHHHHHHHHHHHHHhhhhhhhHhHHHHHHHHhcCCeEEEEecCcchhhhhhhhhhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccccCCchhHhhHHHHhhhhhc-cCccccCCChhhHHHHHHHHHHHHHhhcChhHHHHHHHHHHHhccCeE
Q psy14622 646 NATRAAVEEGIVPGGGTALLRCIAVLDKLET-ANADQATGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVA 724 (788)
Q Consensus 646 ~a~raA~e~GiVpGGG~all~as~~L~~~~~-~~~~~~~G~~~~i~~r~~~l~~~~~~~~~~~d~~~l~eRla~Lsggva 724 (788)
||+|+|+++|||||||+|||||+..|+.++. .++++..|
T Consensus 415 nat~aaveeGivpGGG~all~~~~~l~~lk~~~~~~~k~G---------------------------------------- 454 (550)
T KOG0356|consen 415 NATRAAVEEGIVPGGGTALLRAIPVLDELKATNNFDQKVG---------------------------------------- 454 (550)
T ss_pred HHHHHHhhcCcccCCchHHHHhhhhhhhcccccchHhhhh----------------------------------------
Confidence 9999999999999999999999999999875 56666666
Q ss_pred EEEecccHHHHHHHHhcchHHHHHHHhCCchHHHHHHHhcCCCCeeEEcCCCcccchhhcCC
Q psy14622 725 VLKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVLESSGEMGYDAMNNEYVNMIQKVL 786 (788)
Q Consensus 725 vi~vGa~~~e~~e~~~r~~~a~~a~~Aa~e~g~Vv~~~~~~~~~~Gyda~~~~~~dm~~~Gi 786 (788)
++++.++++.|..++|.||++++.+|++|++. .++|||+++++|+||+++||
T Consensus 455 --------~eiv~~Al~~P~~~IakNAGvdg~~vv~Kv~~--~~~gyda~~~ey~dlv~~Gi 506 (550)
T KOG0356|consen 455 --------VEIVKKALRLPAQTIAKNAGVDGSVVVEKVLN--DDYGYDAAKGEYVDLVEAGI 506 (550)
T ss_pred --------HHHHHHHHhhhHHHHHHhcCCchHHHHHHHHh--hhhhhhhhcccHHHHHhccC
Confidence 99999999999999999999999999999994 48999999999999999997
No 2
>PLN03167 Chaperonin-60 beta subunit; Provisional
Probab=100.00 E-value=1.5e-96 Score=850.51 Aligned_cols=470 Identities=46% Similarity=0.748 Sum_probs=447.0
Q ss_pred EeeccCCCCCcCCCCceeeeecCCCCceEeeChHHhhccccccccccChhhHHHHHHhhhcccccCCCchhHHHHHHHHH
Q psy14622 6 LEQSWGSPKITKDDGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIA 85 (788)
Q Consensus 6 i~~~~~S~kiLGPkG~nkmI~~~~G~~~ITnDGvTIlk~I~l~d~~ehpgAkLl~e~A~~qd~evGDGTTTavVLA~aLL 85 (788)
+.+.++++ |||+||||||++++|+|+|||||+||+|+|++++|++|++|+|++++|.+||+++||||||++|||++|+
T Consensus 78 la~~vktT--LGP~G~~kmi~~~~G~~~ITnDG~TIlk~i~~~hP~~~~gakll~~~a~~qd~evGDGTTTvvVLa~~LL 155 (600)
T PLN03167 78 LADLVGVT--LGPKGRNVVLESKYGSPKIVNDGVTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLI 155 (600)
T ss_pred HHHHHhcc--CCCCCCCEEEECCCCCeeEeccHHHHHHHcccCCchhhHHHHHHHHHHHhhhhhhCCCccHHHHHHHHHH
Confidence 34668888 9999999999999999999999999999999998888889999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHhccCCchHHhhHHHHHHHHhhhcccccccee
Q psy14622 86 KEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVTTPEEIAQVATISANGDKAVGELISDAMKRVSAKVEFQDALV 165 (788)
Q Consensus 86 ~eglklI~~Gi~P~~I~~Gi~~A~~~ile~L~~ls~~V~d~eeL~~VA~tSan~d~~Ig~LIadAv~kV~~~~e~~d~~I 165 (788)
+++++++++|+||..|++||++|.+.+++.|+++++|+++ ++|.+||++|+++++.||+++++|+.+
T Consensus 156 ~ea~~li~~Gi~P~~I~~G~~~A~~~~~~~L~~~s~~v~d-~~L~~vA~tS~~~~~~i~~liaeAv~~------------ 222 (600)
T PLN03167 156 AEGVKVVAAGANPVQITRGIEKTAKALVKELKKMSKEVED-SELADVAAVSAGNNYEVGNMIAEAMSK------------ 222 (600)
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCH-HHHHHHHHHhccCcHHHHHHHHHHHHH------------
Confidence 9999999999999999999999999999999999999976 679999999999999999999999987
Q ss_pred eeccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhcccccccccccccccccCCCcccccccc
Q psy14622 166 LLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRFGPEVRGLMLQ 245 (788)
Q Consensus 166 Lite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~~~~~~~r~~~L~ 245 (788)
T Consensus 223 -------------------------------------------------------------------------------- 222 (600)
T PLN03167 223 -------------------------------------------------------------------------------- 222 (600)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceeecccccccCcccccccccccccccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeeccccCCcceeeEee
Q psy14622 246 GVDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVV 325 (788)
Q Consensus 246 ~~~i~~~~~~~tp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 325 (788)
T Consensus 223 -------------------------------------------------------------------------------- 222 (600)
T PLN03167 223 -------------------------------------------------------------------------------- 222 (600)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccccCCCCCchhhhhhhhhHHHHHHH
Q psy14622 326 GKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFIIELKLVLEYYIQT 405 (788)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (788)
T Consensus 223 -------------------------------------------------------------------------------- 222 (600)
T PLN03167 223 -------------------------------------------------------------------------------- 222 (600)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhhccCCCCcEEEecCCccceeEEEEEeeEecccccccccccccCCceeEeccceeecccccccchhhhHHHHHHHH
Q psy14622 406 YIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESKISSIQSIIPALELAN 485 (788)
Q Consensus 406 ~~~~~~kvG~dGvItveeg~~~~~~lev~eG~~fd~GylSpyfvt~~e~~~v~l~~p~ILitD~kI~~i~~IlP~Le~~~ 485 (788)
||++|+|++++|.+.+|++++++||.||+||+||||+|++++|..+|+||+||++|.+|++.++++|+||.+.
T Consensus 223 -------Vg~~g~i~v~~g~s~~dsl~~v~G~~~d~g~~spyfvt~~~~m~~~l~np~Ill~d~~i~~~~~l~~~le~i~ 295 (600)
T PLN03167 223 -------VGRKGVVTLEEGKSAENNLYVVEGMQFDRGYISPYFVTDSEKMSVEYDNCKLLLVDKKITNARDLIGILEDAI 295 (600)
T ss_pred -------hccCCcEEeccCCCccceeEEEEEEEecCCccCcccccCcCCCeEEEeCCEEEEEccccCCHHHHHHHHHHHH
Confidence 5667889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCeEEEecCCChhhHHhHHhhhcccccceeeecCCCCcchhhhhhhhhHhhhCCeEeccCCCCCcccccCcccccce
Q psy14622 486 SKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATLQDLAVATGGIVFGDEASPVKLEDLQATDLGSV 565 (788)
Q Consensus 486 ~~~rpLLIIAedi~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~~~LeDiAilTGg~vis~~~~g~~l~~v~~~~LG~a 565 (788)
+.++||||+|++|+++||++|++||++|.++++|||+|+||++|++.|+|||++|||++++++ .+..+++++.++||+|
T Consensus 296 ~~g~~lvI~a~~I~~~aL~~L~~nkl~g~~~i~aVk~p~~g~~~~~~L~dia~~tGa~~i~~~-~~~~l~~~~~~~LG~a 374 (600)
T PLN03167 296 RGGYPLLIIAEDIEQEALATLVVNKLRGSLKIAALKAPGFGERKSQYLDDIAILTGGTVIREE-VGLSLDKVGKEVLGTA 374 (600)
T ss_pred HhCcCEEEEcCCCCHHHHHHHHHhhccccceEEEEEcccCCcchHHHHHHHHHhhCCEEeccc-ccCCcccCCHHHCcee
Confidence 999999999999999999999999999999999999999999999999999999999999988 7888999999999999
Q ss_pred eEEEEecCceEEEcCCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHhhcCCeEEEEecCCchhhHHHHHHHHHHHH
Q psy14622 566 GEIVITKDDTLILKGKGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSEVEVNEKKDRVTDAL 645 (788)
Q Consensus 566 ~~V~vt~d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~~~~~~L~eRla~LsggvAvI~VGG~Te~EikErk~r~edAl 645 (788)
++|++++|+|+++++.++++.++.|+.+|+.+++.+.++|++++|++||++|+|++++|+|||+|+.|++|++++++|||
T Consensus 375 ~~v~~~~~~t~iig~~~~~~~i~~r~~~i~~~~~~~~~~~~~~~l~~Ri~~l~g~~aiI~vgG~t~~~l~E~er~i~DAl 454 (600)
T PLN03167 375 AKVVLTKDTTTIVGDGSTQEAVNKRVAQIKNLIEAAEQDYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDAL 454 (600)
T ss_pred eEEEEecccceeeCCCccHHHHHHHHHHHHhhhhccCCHHHHHHHHHHHhhcCCcEEEEEecCCcHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccccCCchhHhhHHHHhhhhhc--cCccccCCChhhHHHHHHHHHHHHHhhcChhHHHHHHHHHHHhccCe
Q psy14622 646 NATRAAVEEGIVPGGGTALLRCIAVLDKLET--ANADQATGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGV 723 (788)
Q Consensus 646 ~a~raA~e~GiVpGGG~all~as~~L~~~~~--~~~~~~~G~~~~i~~r~~~l~~~~~~~~~~~d~~~l~eRla~Lsggv 723 (788)
||+|+|+++|||||||+++++++..|+++.. .+.++..|
T Consensus 455 ~avk~ai~~gvVpGGGa~el~ls~~L~~~~~~~~~~eq~~g--------------------------------------- 495 (600)
T PLN03167 455 NATKAAVEEGIVVGGGCTLLRLASKVDAIKDTLENDEQKVG--------------------------------------- 495 (600)
T ss_pred HHHHHHHhcCCCccHHHHHHHHHHHHHHHHhcCCChhHHHH---------------------------------------
Confidence 9999999999999999999999999976532 22333333
Q ss_pred EEEEecccHHHHHHHHhcchHHHHHHHhCCchHHHHHHHh-cCCCCeeEEcCCCcccchhhcCC
Q psy14622 724 AVLKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVL-ESSGEMGYDAMNNEYVNMIQKVL 786 (788)
Q Consensus 724 avi~vGa~~~e~~e~~~r~~~a~~a~~Aa~e~g~Vv~~~~-~~~~~~Gyda~~~~~~dm~~~Gi 786 (788)
+++..+++++|.+++|.|||+++..|+.+++ +.+.++|||+.+++|+||+++||
T Consensus 496 ---------~~~~~~Al~~p~r~La~NAG~d~~~vv~~L~~~~~~~~G~d~~~g~~~dm~~~GI 550 (600)
T PLN03167 496 ---------ADIVKRALSYPLKLIAKNAGVNGSVVSEKVLSNDNPKFGYNAATGKYEDLMAAGI 550 (600)
T ss_pred ---------HHHHHHHHhcchhhhhhcCCCCHHHHHHHHHhcCCCCEeEeCCCCcCcchHhccC
Confidence 7899999999999999999999999999997 44457899999999999999997
No 3
>PRK14104 chaperonin GroEL; Provisional
Probab=100.00 E-value=9.8e-95 Score=829.26 Aligned_cols=470 Identities=57% Similarity=0.880 Sum_probs=448.2
Q ss_pred eeccCCCCCcCCCCceeeeecCCCCceEeeChHHhhccccccccccChhhHHHHHHhhhcccccCCCchhHHHHHHHHHH
Q psy14622 7 EQSWGSPKITKDDGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIAK 86 (788)
Q Consensus 7 ~~~~~S~kiLGPkG~nkmI~~~~G~~~ITnDGvTIlk~I~l~d~~ehpgAkLl~e~A~~qd~evGDGTTTavVLA~aLL~ 86 (788)
.+.++|+ |||+||||||+++.|+|.|||||+||+|+|+++|+++||+|+|++++|.+||+++||||||++|||++|++
T Consensus 24 a~~v~tT--LGP~G~~k~i~~~~g~~~iTnDG~tIlk~i~~~d~~~~pgakll~e~a~~qd~e~GDGTTTvvvLa~~LL~ 101 (546)
T PRK14104 24 ANAVKVT--LGPKGRNVVLDKSFGAPRITKDGVTVAKEIELEDKFENMGAQMVREVASKSADAAGDGTTTATVLAQAIVR 101 (546)
T ss_pred HHHHhhc--cCCCCCceEEEcCCCCeeEeccHHHHHHHhcCCCcccChHHHHHHHHHHhhcccccCcccHHHHHHHHHHH
Confidence 4567888 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHhccCCchHHhhHHHHHHHHhhhccccccceee
Q psy14622 87 EGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVTTPEEIAQVATISANGDKAVGELISDAMKRVSAKVEFQDALVL 166 (788)
Q Consensus 87 eglklI~~Gi~P~~I~~Gi~~A~~~ile~L~~ls~~V~d~eeL~~VA~tSan~d~~Ig~LIadAv~kV~~~~e~~d~~IL 166 (788)
++.+++++|+||..|++||++|.+.+++.|+++++|+++.+++.+||++|+++|+.+|+++++|+.+
T Consensus 102 ~a~~li~~Gi~P~~I~~G~~~A~~~~~~~L~~~a~~v~~~~~l~~va~~s~~~d~~i~~lv~~Av~~------------- 168 (546)
T PRK14104 102 EGAKSVAAGMNPMDLKRGIDLAVEAVVADLVKNSKKVTSNDEIAQVGTISANGDAEIGKFLADAMKK------------- 168 (546)
T ss_pred HHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhcCchHHHHHHHHHHHH-------------
Confidence 9999999999999999999999999999999999999877889999999999999999999999987
Q ss_pred eccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhcccccccccccccccccCCCccccccccc
Q psy14622 167 LSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRFGPEVRGLMLQG 246 (788)
Q Consensus 167 ite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~~~~~~~r~~~L~~ 246 (788)
T Consensus 169 -------------------------------------------------------------------------------- 168 (546)
T PRK14104 169 -------------------------------------------------------------------------------- 168 (546)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeecccccccCcccccccccccccccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeeccccCCcceeeEeee
Q psy14622 247 VDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVVG 326 (788)
Q Consensus 247 ~~i~~~~~~~tp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 326 (788)
T Consensus 169 -------------------------------------------------------------------------------- 168 (546)
T PRK14104 169 -------------------------------------------------------------------------------- 168 (546)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccccCCCCCchhhhhhhhhHHHHHHHH
Q psy14622 327 KEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFIIELKLVLEYYIQTY 406 (788)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (788)
T Consensus 169 -------------------------------------------------------------------------------- 168 (546)
T PRK14104 169 -------------------------------------------------------------------------------- 168 (546)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhhccCCCCcEEEecCCccceeEEEEEeeEecccccccccccccCCceeEeccceeecccccccchhhhHHHHHHHHh
Q psy14622 407 IYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESKISSIQSIIPALELANS 486 (788)
Q Consensus 407 ~~~~~kvG~dGvItveeg~~~~~~lev~eG~~fd~GylSpyfvt~~e~~~v~l~~p~ILitD~kI~~i~~IlP~Le~~~~ 486 (788)
||.+|+|++++++++++++++++||.|++||+||||+++++++.+++++|+||++|.+|+++++++|+|+.+.+
T Consensus 169 ------vg~~g~i~v~~~~~~~~~~~~~~G~~~~~g~~~p~~~~~~~~~~~~~~~~~Ilv~d~~i~~~~~i~~~l~~i~~ 242 (546)
T PRK14104 169 ------VGNEGVITVEEAKSLETELDVVEGMQFDRGYISPYFVTNADKMRVEMDDAYILINEKKLSSLNELLPLLEAVVQ 242 (546)
T ss_pred ------hccCCceeeEecccccceEEEEEEEEEeCCCCCcchhcCcccCceeeeCcEEEEehhhhcCHHHHHHHHHHHHH
Confidence 67788899999988888999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCeEEEecCCChhhHHhHHhhhcccccceeeecCCCCcchhhhhhhhhHhhhCCeEeccCCCCCcccccCccccccee
Q psy14622 487 KRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATLQDLAVATGGIVFGDEASPVKLEDLQATDLGSVG 566 (788)
Q Consensus 487 ~~rpLLIIAedi~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~~~LeDiAilTGg~vis~~~~g~~l~~v~~~~LG~a~ 566 (788)
.++||||++++|+++||++|+.||++++++++|||+|+||++|++.|+|||++|||++++++ .+..++++++++||+|.
T Consensus 243 ~g~~lvI~~~~i~~~al~~l~~Nk~~~~~~i~av~~~~~g~~r~~~l~~ia~~tG~~~i~~~-~~~~l~~~~~~~LG~a~ 321 (546)
T PRK14104 243 TGKPLVIVAEDVEGEALATLVVNRLRGGLKVAAVKAPGFGDRRKAMLQDIAILTGGQAISED-LGIKLENVTLQMLGRAK 321 (546)
T ss_pred hCcCEEEECCCCcHHHHHHHHhCcccceeeEEEEeccCCCcchHHHHHHHHHHhCCEEEecC-CCCCcCcCCHHHCCcee
Confidence 99999999999999999999999999999999999999999999999999999999999998 78889999999999999
Q ss_pred EEEEecCceEEEcCCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHhhcCCeEEEEecCCchhhHHHHHHHHHHHHH
Q psy14622 567 EIVITKDDTLILKGKGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSEVEVNEKKDRVTDALN 646 (788)
Q Consensus 567 ~V~vt~d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~~~~~~L~eRla~LsggvAvI~VGG~Te~EikErk~r~edAl~ 646 (788)
+|++++++|++++|.++++.+..|+++|+.+++++.++|++++|+|||+||+|++|+|.|||+|+.+++|++++++||+|
T Consensus 322 ~v~~~~~~~~~i~g~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~eRi~~l~~~~atI~irG~t~~~l~e~~r~i~Dal~ 401 (546)
T PRK14104 322 KVMIDKENTTIVNGAGKKADIEARVAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDAMH 401 (546)
T ss_pred EEEEcCCEEEEEeCCCCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccccCCchhHhhHHHHhhhhhccCccccCCChhhHHHHHHHHHHHHHhhcChhHHHHHHHHHHHhccCeEEE
Q psy14622 647 ATRAAVEEGIVPGGGTALLRCIAVLDKLETANADQATGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVL 726 (788)
Q Consensus 647 a~raA~e~GiVpGGG~all~as~~L~~~~~~~~~~~~G~~~~i~~r~~~l~~~~~~~~~~~d~~~l~eRla~Lsggvavi 726 (788)
|+|+|+++|||||||+++++++..|.++...+.+++.|
T Consensus 402 a~~~ai~~g~VpGGGa~e~~~s~~L~~~~~~~~~~~~~------------------------------------------ 439 (546)
T PRK14104 402 ATRAAVEEGIVPGGGVALLRASEQLKGIKTKNDDQKTG------------------------------------------ 439 (546)
T ss_pred HHHHHHHcCcCcCchHHHHHHHHHHHHhhcCChHHHHH------------------------------------------
Confidence 99999999999999999999999987653222222223
Q ss_pred EecccHHHHHHHHhcchHHHHHHHhCCchHHHHHHHhc-CCCCeeEEcCCCcccchhhcCC
Q psy14622 727 KVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVLE-SSGEMGYDAMNNEYVNMIQKVL 786 (788)
Q Consensus 727 ~vGa~~~e~~e~~~r~~~a~~a~~Aa~e~g~Vv~~~~~-~~~~~Gyda~~~~~~dm~~~Gi 786 (788)
++...++++.+.+++|.|||+++..|+.++++ ...++|||+.+++|+||++.||
T Consensus 440 ------i~~~a~Al~~ip~~La~NaG~d~~~v~~~l~~~~~~~~G~d~~~g~~~d~~~~GI 494 (546)
T PRK14104 440 ------VEIVRKALSAPARQIAINAGEDGSVIVGKILEKEQYSYGFDSQTGEYGNLVSKGI 494 (546)
T ss_pred ------HHHHHHHHHhhHHHHHHhCCCCHHHHHHHHHhcCCCcEeEeCCCCceeehHhcCC
Confidence 89999999999999999999999999999976 3456899999999999999997
No 4
>PRK12852 groEL chaperonin GroEL; Reviewed
Probab=100.00 E-value=1.6e-94 Score=827.98 Aligned_cols=471 Identities=56% Similarity=0.889 Sum_probs=448.5
Q ss_pred EeeccCCCCCcCCCCceeeeecCCCCceEeeChHHhhccccccccccChhhHHHHHHhhhcccccCCCchhHHHHHHHHH
Q psy14622 6 LEQSWGSPKITKDDGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIA 85 (788)
Q Consensus 6 i~~~~~S~kiLGPkG~nkmI~~~~G~~~ITnDGvTIlk~I~l~d~~ehpgAkLl~e~A~~qd~evGDGTTTavVLA~aLL 85 (788)
+.+.++|+ |||+||||||+++.|+|+|||||+||+++|+++|+++||+|+|++++|.+||+++||||||+++||++|+
T Consensus 23 la~~v~tT--LGP~G~~kmi~~~~g~~~iTnDG~TIlk~i~~~~~~~~p~akll~e~a~~q~~e~GDGTTtvvvLa~eLL 100 (545)
T PRK12852 23 LANAVKVT--LGPKGRNVVIEKSFGAPRITKDGVTVAKEIELEDKFENMGAQMVREVASKTNDLAGDGTTTATVLAQAIV 100 (545)
T ss_pred HHHHHhcc--cCCCCCCEEEECCCCCeeEeccHHHHHHHccCCCcccChHHHHHHHHHhhcCceecCCcchHHHHHHHHH
Confidence 34668889 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHhccCCchHHhhHHHHHHHHhhhcccccccee
Q psy14622 86 KEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVTTPEEIAQVATISANGDKAVGELISDAMKRVSAKVEFQDALV 165 (788)
Q Consensus 86 ~eglklI~~Gi~P~~I~~Gi~~A~~~ile~L~~ls~~V~d~eeL~~VA~tSan~d~~Ig~LIadAv~kV~~~~e~~d~~I 165 (788)
+++.+++++|+||..|++||++|.+.+++.|+++++|+++.+++.+||++|+++++.+|+++++|+.+
T Consensus 101 ~~a~~li~~Gi~P~~I~~G~~~A~~~~l~~L~~~s~~v~~~~~l~~va~~s~~~~~~l~~li~eA~~~------------ 168 (545)
T PRK12852 101 REGAKAVAAGMNPMDLKRGIDIAVAAVVKDIEKRAKPVASSAEIAQVGTISANGDAAIGKMIAQAMQK------------ 168 (545)
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHhhhcCChHHHHHHHHHHHHH------------
Confidence 99999999999999999999999999999999999999888889999999999999999999999987
Q ss_pred eeccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhcccccccccccccccccCCCcccccccc
Q psy14622 166 LLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRFGPEVRGLMLQ 245 (788)
Q Consensus 166 Lite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~~~~~~~r~~~L~ 245 (788)
T Consensus 169 -------------------------------------------------------------------------------- 168 (545)
T PRK12852 169 -------------------------------------------------------------------------------- 168 (545)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceeecccccccCcccccccccccccccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeeccccCCcceeeEee
Q psy14622 246 GVDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVV 325 (788)
Q Consensus 246 ~~~i~~~~~~~tp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 325 (788)
T Consensus 169 -------------------------------------------------------------------------------- 168 (545)
T PRK12852 169 -------------------------------------------------------------------------------- 168 (545)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccccCCCCCchhhhhhhhhHHHHHHH
Q psy14622 326 GKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFIIELKLVLEYYIQT 405 (788)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (788)
T Consensus 169 -------------------------------------------------------------------------------- 168 (545)
T PRK12852 169 -------------------------------------------------------------------------------- 168 (545)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhhccCCCCcEEEecCCccceeEEEEEeeEecccccccccccccCCceeEeccceeecccccccchhhhHHHHHHHH
Q psy14622 406 YIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESKISSIQSIIPALELAN 485 (788)
Q Consensus 406 ~~~~~~kvG~dGvItveeg~~~~~~lev~eG~~fd~GylSpyfvt~~e~~~v~l~~p~ILitD~kI~~i~~IlP~Le~~~ 485 (788)
||.+|+|++++|++..+++++++||.|++||+||||++++++|..+|+||+||++|.+|+++++++|+|+.+.
T Consensus 169 -------vg~~g~i~v~~g~~~~~~~~~v~G~~~~~g~~~p~~v~~~~~~~~~l~n~~Ili~d~~i~~~~~i~~~l~~i~ 241 (545)
T PRK12852 169 -------VGNEGVITVEENKSLETEVDIVEGMKFDRGYLSPYFVTNAEKMTVELDDAYILLHEKKLSGLQAMLPVLEAVV 241 (545)
T ss_pred -------hccCCceeeecCCCcceEEEEEEeEEecCCccCCccccccccceEEecCceEEEecCccCCHHHHHHHHHHHH
Confidence 5667788888898888999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCeEEEecCCChhhHHhHHhhhcccccceeeecCCCCcchhhhhhhhhHhhhCCeEeccCCCCCcccccCcccccce
Q psy14622 486 SKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATLQDLAVATGGIVFGDEASPVKLEDLQATDLGSV 565 (788)
Q Consensus 486 ~~~rpLLIIAedi~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~~~LeDiAilTGg~vis~~~~g~~l~~v~~~~LG~a 565 (788)
+.+.||||++++|+++||++|+.||++|+++++|||+|+||++|+..|+|||++|||++++.+ .|.+++++++++||+|
T Consensus 242 ~~g~~lvI~~~~i~~~al~~l~~nk~~~~~~i~av~~~~~~~~r~~~l~~ia~~tGa~~i~~~-~~~~l~~~~~~~lG~~ 320 (545)
T PRK12852 242 QSGKPLLIIAEDVEGEALATLVVNRLRGGLKVAAVKAPGFGDRRKAMLEDIAILTGGQLISED-LGIKLENVTLKMLGRA 320 (545)
T ss_pred HhCcCEEEECCCCcHHHHHHHHHhcccccceEEEEecCCcccchHhHHHHHHHhcCCEEEecC-cCCCcCCCCHHHCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999987 7888999999999999
Q ss_pred eEEEEecCceEEEcCCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHhhcCCeEEEEecCCchhhHHHHHHHHHHHH
Q psy14622 566 GEIVITKDDTLILKGKGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSEVEVNEKKDRVTDAL 645 (788)
Q Consensus 566 ~~V~vt~d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~~~~~~L~eRla~LsggvAvI~VGG~Te~EikErk~r~edAl 645 (788)
++|++++++|++++|.++++.+..|+++|+.+++++.+.|++++|+|||+||+|++++|.|||+|+.+++|++++++||+
T Consensus 321 ~~v~~~~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~~R~~~l~~~~~tI~irG~t~~~l~E~er~i~DAl 400 (545)
T PRK12852 321 KKVVIDKENTTIVNGAGKKADIEARVGQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRVEDAL 400 (545)
T ss_pred cEEEEEccEEEEEeCCCCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccccCCchhHhhHHHHhhhhhccCccccCCChhhHHHHHHHHHHHHHhhcChhHHHHHHHHHHHhccCeEE
Q psy14622 646 NATRAAVEEGIVPGGGTALLRCIAVLDKLETANADQATGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAV 725 (788)
Q Consensus 646 ~a~raA~e~GiVpGGG~all~as~~L~~~~~~~~~~~~G~~~~i~~r~~~l~~~~~~~~~~~d~~~l~eRla~Lsggvav 725 (788)
|++|+|+++|||||||+++++++..|.++...+.+++.|
T Consensus 401 ~a~~~a~~~g~VpGGGa~e~~~s~~L~~~~~~~~~~q~~----------------------------------------- 439 (545)
T PRK12852 401 NATRAAVQEGIVPGGGVALLRAKKAVGRINNDNADVQAG----------------------------------------- 439 (545)
T ss_pred HHHHHHHhcCCCcCchHHHHHHHHHHHHhhcCCcHHHHH-----------------------------------------
Confidence 999999999999999999999999997654322233333
Q ss_pred EEecccHHHHHHHHhcchHHHHHHHhCCchHHHHHHHhc-CCCCeeEEcCCCcccchhhcCC
Q psy14622 726 LKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVLE-SSGEMGYDAMNNEYVNMIQKVL 786 (788)
Q Consensus 726 i~vGa~~~e~~e~~~r~~~a~~a~~Aa~e~g~Vv~~~~~-~~~~~Gyda~~~~~~dm~~~Gi 786 (788)
++...++++.|.+++|.|||+++..|+.++++ .+..+|||+.+++|+||++.||
T Consensus 440 -------i~~~a~AL~~ip~~La~NaG~d~~~vl~~l~~~~~~~~G~d~~~g~~~d~~~~GI 494 (545)
T PRK12852 440 -------INIVLKALEAPIRQIAENAGVEGSIVVGKILENKSETFGFDAQTEEYVDMVAKGI 494 (545)
T ss_pred -------HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhcCCCeeEeCcCCCcccHHhCcC
Confidence 89999999999999999999999999999986 4456899999999999999997
No 5
>PTZ00114 Heat shock protein 60; Provisional
Probab=100.00 E-value=1.1e-92 Score=814.34 Aligned_cols=472 Identities=59% Similarity=0.924 Sum_probs=449.4
Q ss_pred EeeccCCCCCcCCCCceeeeecCCCCceEeeChHHhhccccccccccChhhHHHHHHhhhcccccCCCchhHHHHHHHHH
Q psy14622 6 LEQSWGSPKITKDDGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIA 85 (788)
Q Consensus 6 i~~~~~S~kiLGPkG~nkmI~~~~G~~~ITnDGvTIlk~I~l~d~~ehpgAkLl~e~A~~qd~evGDGTTTavVLA~aLL 85 (788)
+.+.++|+ |||+||||||+++.|+|+|||||+||+|+|++++|++||+|+|++++|.+||+++||||||++|||++|+
T Consensus 34 la~~v~tT--LGP~G~~kmi~~~~g~~~ITnDG~TIlk~i~~~~p~~~~~a~ll~~~a~~qd~evGDGTTtvvvLa~~LL 111 (555)
T PTZ00114 34 LADAVAVT--LGPKGRNVIIEQEYGSPKITKDGVTVAKAIEFSDRFENVGAQLIRQVASKTNDKAGDGTTTATILARAIF 111 (555)
T ss_pred HHHHHhcc--CCCCCCcEEEECCCCCeEEeeChHHHHHhcCcCCcchhHHHHHHHHHHHhhccccCCcccHHHHHHHHHH
Confidence 34678899 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHhccCCchHHhhHHHHHHHHhhhcccccccee
Q psy14622 86 KEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVTTPEEIAQVATISANGDKAVGELISDAMKRVSAKVEFQDALV 165 (788)
Q Consensus 86 ~eglklI~~Gi~P~~I~~Gi~~A~~~ile~L~~ls~~V~d~eeL~~VA~tSan~d~~Ig~LIadAv~kV~~~~e~~d~~I 165 (788)
+++.+++++|+||..|++||++|.+.+++.|+++++|+++.+++.++|++|+++++++|+++++|+.+
T Consensus 112 ~~a~~li~~GihP~~I~~G~~~A~~~~~~~L~~~s~~v~~~~~l~~va~ts~~~~~~l~~li~eAv~~------------ 179 (555)
T PTZ00114 112 REGCKAVAAGLNPMDLKRGIDLAVKVVLESLKEQSRPVKTKEDILNVATISANGDVEIGSLIADAMDK------------ 179 (555)
T ss_pred HHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHcCChHHHHHHHHHHHHH------------
Confidence 99999999999999999999999999999999999999888899999999999999999999999986
Q ss_pred eeccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhcccccccccccccccccCCCcccccccc
Q psy14622 166 LLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRFGPEVRGLMLQ 245 (788)
Q Consensus 166 Lite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~~~~~~~r~~~L~ 245 (788)
T Consensus 180 -------------------------------------------------------------------------------- 179 (555)
T PTZ00114 180 -------------------------------------------------------------------------------- 179 (555)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceeecccccccCcccccccccccccccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeeccccCCcceeeEee
Q psy14622 246 GVDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVV 325 (788)
Q Consensus 246 ~~~i~~~~~~~tp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 325 (788)
T Consensus 180 -------------------------------------------------------------------------------- 179 (555)
T PTZ00114 180 -------------------------------------------------------------------------------- 179 (555)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccccCCCCCchhhhhhhhhHHHHHHH
Q psy14622 326 GKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFIIELKLVLEYYIQT 405 (788)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (788)
T Consensus 180 -------------------------------------------------------------------------------- 179 (555)
T PTZ00114 180 -------------------------------------------------------------------------------- 179 (555)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhhccCCCCcEEEecCCccceeEEEEEeeEecccccccccccccCCceeEeccceeecccccccchhhhHHHHHHHH
Q psy14622 406 YIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESKISSIQSIIPALELAN 485 (788)
Q Consensus 406 ~~~~~~kvG~dGvItveeg~~~~~~lev~eG~~fd~GylSpyfvt~~e~~~v~l~~p~ILitD~kI~~i~~IlP~Le~~~ 485 (788)
+|.+|+|++++|.++++++++++||.|++||+||||++++++|..+|+||+||++|.+|+++++++|+|+.+.
T Consensus 180 -------vg~~g~I~~~~g~~~~ds~~~v~G~~~~~g~~~~~~~~~~~~~~~~l~~~~Ili~d~~L~~~~~i~~~le~i~ 252 (555)
T PTZ00114 180 -------VGKDGTITVEDGKTLEDELEVVEGMSFDRGYISPYFVTNEKTQKVELENPLILVTDKKISSIQSILPILEHAV 252 (555)
T ss_pred -------hCcCCcEEEcCCCCccceEEEEEEEEEeccccccccccccccCeEEecCCEEEEEcCCCCCHHHHHHHHHHHH
Confidence 5667788999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCeEEEecCCChhhHHhHHhhhcccccceeeecCCCCcchhhhhhhhhHhhhCCeEeccCCCCCcccccCcccccce
Q psy14622 486 SKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATLQDLAVATGGIVFGDEASPVKLEDLQATDLGSV 565 (788)
Q Consensus 486 ~~~rpLLIIAedi~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~~~LeDiAilTGg~vis~~~~g~~l~~v~~~~LG~a 565 (788)
+.++||||++++|+++||++|+.|+++|+++++|||.|+||+.|++.|+|||.+|||+++++.+.+..+++++.++||+|
T Consensus 253 ~~~~~llI~~~~i~~~al~~L~~n~~~g~~~i~avk~~~~g~~~~~~l~~la~~tG~~~i~~~~~~~~l~~~~~~~LG~a 332 (555)
T PTZ00114 253 KNKRPLLIIAEDVEGEALQTLIINKLRGGLKVCAVKAPGFGDNRKDILQDIAVLTGATVVSEDNVGLKLDDFDPSMLGSA 332 (555)
T ss_pred HhCCCEEEECCCCcHHHHHHHHHhCCCCceEEEEEecCCCCcchHHHHHHHHHHhCCEEecccccccCcccCCHHHcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999877889999999999999
Q ss_pred eEEEEecCceEEEcCCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHhhcCCeEEEEecCCchhhHHHHHHHHHHHH
Q psy14622 566 GEIVITKDDTLILKGKGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSEVEVNEKKDRVTDAL 645 (788)
Q Consensus 566 ~~V~vt~d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~~~~~~L~eRla~LsggvAvI~VGG~Te~EikErk~r~edAl 645 (788)
++|++++++|++++|.+++++|+.|+++|+.+++.+.++|++++|+|||+||+|++++|.|||+|+.+++|++++++||+
T Consensus 333 ~~v~~~~~~~~~~~~~~~~~~i~~r~~~l~~~~~~~~~~~~~~~l~eR~~~l~~~~~tI~i~G~t~~~l~E~~r~i~Dal 412 (555)
T PTZ00114 333 KKVTVTKDETVILTGGGDKAEIKERVELLRSQIERTTSEYDKEKLKERLAKLSGGVAVIKVGGASEVEVNEKKDRIEDAL 412 (555)
T ss_pred ceEEEEeceEEEEeCCCcHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCeEEEEecCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccccCCchhHhhHHHHhhhhhc---cCccccCCChhhHHHHHHHHHHHHHhhcChhHHHHHHHHHHHhccC
Q psy14622 646 NATRAAVEEGIVPGGGTALLRCIAVLDKLET---ANADQATGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASG 722 (788)
Q Consensus 646 ~a~raA~e~GiVpGGG~all~as~~L~~~~~---~~~~~~~G~~~~i~~r~~~l~~~~~~~~~~~d~~~l~eRla~Lsgg 722 (788)
|++|+|+++|||||||+++++|+..|.++.. .+.+++.|
T Consensus 413 ~~~k~a~~~gvVpGGGa~e~~~s~~L~~~~~~~~~~~~~~~~-------------------------------------- 454 (555)
T PTZ00114 413 NATRAAVEEGIVPGGGVALLRASKLLDKLEEDNELTPDQRTG-------------------------------------- 454 (555)
T ss_pred HHHHHHHhcCcccCCcHHHHHHHHHHHHHhhccCCchHHHHH--------------------------------------
Confidence 9999999999999999999999999976532 11223333
Q ss_pred eEEEEecccHHHHHHHHhcchHHHHHHHhCCchHHHHHHHhc-CCCCeeEEcCCCcccchhhcCC
Q psy14622 723 VAVLKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVLE-SSGEMGYDAMNNEYVNMIQKVL 786 (788)
Q Consensus 723 vavi~vGa~~~e~~e~~~r~~~a~~a~~Aa~e~g~Vv~~~~~-~~~~~Gyda~~~~~~dm~~~Gi 786 (788)
++...++++.|.+++|.|||+++..|+.++++ .+..+|||+.+|+++||++.||
T Consensus 455 ----------i~~~a~AL~~ip~~La~NaG~d~~~v~~~l~~~~~~~~G~d~~~g~~~d~~~~GI 509 (555)
T PTZ00114 455 ----------VKIVRNALRLPTKQIAENAGVEGAVVVEKILEKKDPSFGYDAQTGEYVNMFEAGI 509 (555)
T ss_pred ----------HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcCCCCEeEeCCCCcEeeHHhCCC
Confidence 89999999999999999999999999999976 4456899999999999999997
No 6
>CHL00093 groEL chaperonin GroEL
Probab=100.00 E-value=1.4e-91 Score=801.27 Aligned_cols=469 Identities=46% Similarity=0.767 Sum_probs=443.3
Q ss_pred eeccCCCCCcCCCCceeeeecCCCCceEeeChHHhhccccccccccChhhHHHHHHhhhcccccCCCchhHHHHHHHHHH
Q psy14622 7 EQSWGSPKITKDDGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIAK 86 (788)
Q Consensus 7 ~~~~~S~kiLGPkG~nkmI~~~~G~~~ITnDGvTIlk~I~l~d~~ehpgAkLl~e~A~~qd~evGDGTTTavVLA~aLL~ 86 (788)
.+.++|+ |||+||||||+++.|+|+|||||+||+|+|++++|+++++++|++++|.+|++++||||||++|||++|++
T Consensus 23 a~~v~tT--lGP~G~~kmi~~~~g~~~ITnDG~tIlk~i~~~hp~a~~g~~li~~~a~~~~~e~GDGTTtvvvLa~eLL~ 100 (529)
T CHL00093 23 AEAVSVT--LGPKGRNVVLEKKYGSPQIVNDGVTIAKEIELEDHIENTGVALIRQAASKTNDVAGDGTTTATVLAYAIVK 100 (529)
T ss_pred HHHHhcc--cCCCCCcEEEECCCCCeeEeccHHHHHHHccCcCHHHHHHHHHHHHHHHhcCceecCCCCHHHHHHHHHHH
Confidence 4568888 99999999999999999999999999999999977777777899999999999999999999999999999
Q ss_pred HHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHhccCCchHHhhHHHHHHHHhhhccccccceee
Q psy14622 87 EGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVTTPEEIAQVATISANGDKAVGELISDAMKRVSAKVEFQDALVL 166 (788)
Q Consensus 87 eglklI~~Gi~P~~I~~Gi~~A~~~ile~L~~ls~~V~d~eeL~~VA~tSan~d~~Ig~LIadAv~kV~~~~e~~d~~IL 166 (788)
+|++++++|+||..|++||++|.+.+++.|+++++|+++.++|.+||++|+++++.||+++++|+.+
T Consensus 101 ~a~~li~~Gi~P~~I~~G~~~A~~~~l~~L~~~s~~v~d~~~L~~VA~ts~~~~~~l~~lv~eAv~~------------- 167 (529)
T CHL00093 101 QGMKNVAAGANPISLKRGIEKATQYVVSQIAEYARPVEDIQAITQVASISAGNDEEVGSMIADAIEK------------- 167 (529)
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHhccChHHHHHHHHHHHHH-------------
Confidence 9999999999999999999999999999999999999988999999999999999999999999987
Q ss_pred eccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhcccccccccccccccccCCCccccccccc
Q psy14622 167 LSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRFGPEVRGLMLQG 246 (788)
Q Consensus 167 ite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~~~~~~~r~~~L~~ 246 (788)
T Consensus 168 -------------------------------------------------------------------------------- 167 (529)
T CHL00093 168 -------------------------------------------------------------------------------- 167 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeecccccccCcccccccccccccccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeeccccCCcceeeEeee
Q psy14622 247 VDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVVG 326 (788)
Q Consensus 247 ~~i~~~~~~~tp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 326 (788)
T Consensus 168 -------------------------------------------------------------------------------- 167 (529)
T CHL00093 168 -------------------------------------------------------------------------------- 167 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccccCCCCCchhhhhhhhhHHHHHHHH
Q psy14622 327 KEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFIIELKLVLEYYIQTY 406 (788)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (788)
T Consensus 168 -------------------------------------------------------------------------------- 167 (529)
T CHL00093 168 -------------------------------------------------------------------------------- 167 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhhccCCCCcEEEecCCccceeEEEEEeeEecccccccccccccCCceeEeccceeecccccccch-hhhHHHHHHHH
Q psy14622 407 IYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESKISSI-QSIIPALELAN 485 (788)
Q Consensus 407 ~~~~~kvG~dGvItveeg~~~~~~lev~eG~~fd~GylSpyfvt~~e~~~v~l~~p~ILitD~kI~~i-~~IlP~Le~~~ 485 (788)
||.+|.|++++|++..+++++++|+.|++||+||||++++++|.++|+||+||++|.+|+.. ++++|+|+.+.
T Consensus 168 ------vg~~g~i~~~~g~~~~~~~~~v~G~~~~~g~~~p~fv~~~k~~~~~l~n~~Ili~d~~le~~~~~i~~~l~~i~ 241 (529)
T CHL00093 168 ------VGREGVISLEEGKSTVTELEITEGMRFEKGFISPYFVTDTERMEVVQENPYILLTDKKITLVQQDLLPILEQVT 241 (529)
T ss_pred ------hccCCceeecCCCccceeeEEEeeEEecCccCcCccccCCccceEEecCceehhhcCCCCchHHHHHHHHHHHH
Confidence 45567777888888889999999999999999999999999999999999999999999988 78999999999
Q ss_pred hcCCCeEEEecCCChhhHHhHHhhhcccccceeeecCCCCcchhhhhhhhhHhhhCCeEeccCCCCCcccccCcccccce
Q psy14622 486 SKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATLQDLAVATGGIVFGDEASPVKLEDLQATDLGSV 565 (788)
Q Consensus 486 ~~~rpLLIIAedi~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~~~LeDiAilTGg~vis~~~~g~~l~~v~~~~LG~a 565 (788)
+.++||+|+|++|++++|++|++|+++|.++++|||.|+||++|+..|+|||++|||++++++ .|.+++++++++||+|
T Consensus 242 ~~~~~lvi~~~~i~~~al~~l~l~k~~g~~~i~avr~~~~~~~~k~~l~~ia~~tGa~~i~~~-~~~~~~~~~~~~LG~~ 320 (529)
T CHL00093 242 KTKRPLLIIAEDVEKEALATLVLNKLRGIVNVVAVRAPGFGDRRKAMLEDIAILTGGQVITED-AGLSLETIQLDLLGQA 320 (529)
T ss_pred hcCCCEEEEcCCCChHHHHHHHHhhhcccceEEEEecCCCCcchHHHHHHHHHhhCCEEeccc-ccCCcCCCCHHHCCcc
Confidence 999999999999999999999999999999999999999999999999999999999999988 6788999999999999
Q ss_pred eEEEEecCceEEEcCCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHhhcCCeEEEEecCCchhhHHHHHHHHHHHH
Q psy14622 566 GEIVITKDDTLILKGKGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSEVEVNEKKDRVTDAL 645 (788)
Q Consensus 566 ~~V~vt~d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~~~~~~L~eRla~LsggvAvI~VGG~Te~EikErk~r~edAl 645 (788)
++|.+++++|++++ .++++.+..|+++++++++.++++|+|++|+|||++|+|++++|.+||+|+.+++|++++++||+
T Consensus 321 ~~v~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~eR~~~l~g~~~~I~irg~t~~~l~E~er~i~DAl 399 (529)
T CHL00093 321 RRIIVTKDSTTIIA-DGNEEQVKARCEQLRKQIEIADSSYEKEKLQERLAKLSGGVAVIKVGAATETEMKDKKLRLEDAI 399 (529)
T ss_pred eEEEEecCEEEEEe-cCcHHHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHhcCCeEEEEeccCcHHHHHHHHHHHHHHH
Confidence 99999999999997 78899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccccCCchhHhhHHHHhhhhh--ccCccccCCChhhHHHHHHHHHHHHHhhcChhHHHHHHHHHHHhccCe
Q psy14622 646 NATRAAVEEGIVPGGGTALLRCIAVLDKLE--TANADQATGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGV 723 (788)
Q Consensus 646 ~a~raA~e~GiVpGGG~all~as~~L~~~~--~~~~~~~~G~~~~i~~r~~~l~~~~~~~~~~~d~~~l~eRla~Lsggv 723 (788)
||+|+|+++|||||||+++++|+..|.++. ..+.+++.|
T Consensus 400 ~a~r~a~~~gvVpGGGa~e~~~s~~L~~~~~~~~~g~~~~~--------------------------------------- 440 (529)
T CHL00093 400 NATKAAVEEGIVPGGGATLVHLSENLKTWAKNNLKEDELIG--------------------------------------- 440 (529)
T ss_pred HHHHHHHHcCcccCCcHHHHHHHHHHHHHhccCCChHHHHH---------------------------------------
Confidence 999999999999999999999999997653 223333333
Q ss_pred EEEEecccHHHHHHHHhcchHHHHHHHhCCchHHHHHHHhcCCCCeeEEcCCCcccchhhcCC
Q psy14622 724 AVLKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVLESSGEMGYDAMNNEYVNMIQKVL 786 (788)
Q Consensus 724 avi~vGa~~~e~~e~~~r~~~a~~a~~Aa~e~g~Vv~~~~~~~~~~Gyda~~~~~~dm~~~Gi 786 (788)
++...++++.|.+++|.|||++...|+.++.+...++|||+.+|+|+||++.||
T Consensus 441 ---------i~~~a~AL~~ip~~La~NaG~d~~~v~~~l~~~~~~~G~d~~~g~~~d~~~~GI 494 (529)
T CHL00093 441 ---------ALIVARAILAPLKRIAENAGKNGSVIIEKVQEQDFEIGYNAANNKFVNMYEAGI 494 (529)
T ss_pred ---------HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHccCCCEeEECCCCcccchHhccC
Confidence 899999999999999999999999999999876667999999999999999997
No 7
>TIGR02348 GroEL chaperonin GroL. This family consists of GroEL, the larger subunit of the GroEL/GroES cytosolic chaperonin. It is found in bacteria, organelles derived from bacteria, and occasionally in the Archaea. The bacterial GroEL/GroES group I chaperonin is replaced a group II chaperonin, usually called the thermosome in the Archaeota and CCT (chaperone-containing TCP) in the Eukaryota. GroEL, thermosome subunits, and CCT subunits all fall under the scope of Pfam model pfam00118.
Probab=100.00 E-value=5.7e-90 Score=787.23 Aligned_cols=470 Identities=57% Similarity=0.874 Sum_probs=444.2
Q ss_pred eeccCCCCCcCCCCceeeeecCCCCceEeeChHHhhccccccccccChhhHHHHHHhhhcccccCCCchhHHHHHHHHHH
Q psy14622 7 EQSWGSPKITKDDGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIAK 86 (788)
Q Consensus 7 ~~~~~S~kiLGPkG~nkmI~~~~G~~~ITnDGvTIlk~I~l~d~~ehpgAkLl~e~A~~qd~evGDGTTTavVLA~aLL~ 86 (788)
.+.++|+ |||+||||||+++.|+|+|||||+||+|+|++++|++|++|+|++++|.+||+++||||||+++||++|++
T Consensus 22 a~~v~tt--lGP~G~~kmi~~~~g~~~iTnDG~tIlk~i~~~hp~~~~~akll~~~a~~qd~e~GDGTTtvviLa~~Ll~ 99 (524)
T TIGR02348 22 ADAVKVT--LGPKGRNVVLEKSFGAPTITKDGVTVAKEIELEDKFENMGAQLVKEVASKTNDVAGDGTTTATVLAQAIVK 99 (524)
T ss_pred HHHhccC--cCCCCCcEEEECCCCCeeEeccHHHHHHHccCCChhhHHHHHHHHHHHHccCceeCCCcchHHHHHHHHHH
Confidence 4668899 99999999999999999999999999999999966666699999999999999999999999999999999
Q ss_pred HHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHhccCCchHHhhHHHHHHHHhhhccccccceee
Q psy14622 87 EGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVTTPEEIAQVATISANGDKAVGELISDAMKRVSAKVEFQDALVL 166 (788)
Q Consensus 87 eglklI~~Gi~P~~I~~Gi~~A~~~ile~L~~ls~~V~d~eeL~~VA~tSan~d~~Ig~LIadAv~kV~~~~e~~d~~IL 166 (788)
++.+++++|+||..|++||++|.+.+++.|+++++|+++.+++.++|++|+++++++++++++|+.+
T Consensus 100 ~a~~li~~GihP~~Ii~G~~~A~~~~l~~L~~~s~~~~~~~~l~~va~ts~~~~~~l~~lv~~A~~~------------- 166 (524)
T TIGR02348 100 EGLKNVAAGANPIELKRGIEKAVEAAVEELKKLSKPVKGKKEIAQVATISANNDEEIGSLIAEAMEK------------- 166 (524)
T ss_pred HHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhccChHHHHHHHHHHHHH-------------
Confidence 9999999999999999999999999999999999999988999999999999999999999999987
Q ss_pred eccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhcccccccccccccccccCCCccccccccc
Q psy14622 167 LSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRFGPEVRGLMLQG 246 (788)
Q Consensus 167 ite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~~~~~~~r~~~L~~ 246 (788)
T Consensus 167 -------------------------------------------------------------------------------- 166 (524)
T TIGR02348 167 -------------------------------------------------------------------------------- 166 (524)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeecccccccCcccccccccccccccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeeccccCCcceeeEeee
Q psy14622 247 VDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVVG 326 (788)
Q Consensus 247 ~~i~~~~~~~tp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 326 (788)
T Consensus 167 -------------------------------------------------------------------------------- 166 (524)
T TIGR02348 167 -------------------------------------------------------------------------------- 166 (524)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccccCCCCCchhhhhhhhhHHHHHHHH
Q psy14622 327 KEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFIIELKLVLEYYIQTY 406 (788)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (788)
T Consensus 167 -------------------------------------------------------------------------------- 166 (524)
T TIGR02348 167 -------------------------------------------------------------------------------- 166 (524)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhhccCCCCcEEEecCCccceeEEEEEeeEecccccccccccccCCceeEeccceeecccccccchhhhHHHHHHHHh
Q psy14622 407 IYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESKISSIQSIIPALELANS 486 (788)
Q Consensus 407 ~~~~~kvG~dGvItveeg~~~~~~lev~eG~~fd~GylSpyfvt~~e~~~v~l~~p~ILitD~kI~~i~~IlP~Le~~~~ 486 (788)
+|.+|.|.++.|++.++++++++||.|++||.+|||++++++|...++||+||++|.+|+++++++|+++.+.+
T Consensus 167 ------v~~~~~i~v~~g~~~~~~s~~v~G~~~~~g~~~~~~~~~~~~~~~~~~n~~Ili~d~~i~~~~~i~~~l~~i~~ 240 (524)
T TIGR02348 167 ------VGKDGVITVEESKSLETELEVVEGMQFDRGYISPYFVTDAEKMEVELENPYILITDKKISNIKDLLPLLEKVAQ 240 (524)
T ss_pred ------hCcCCcEeeecCCCccccEEEEEeEEEcCCCCCcccccCccCCeEEeeCceeeeccCCcCCHHHHHHHHHHHHH
Confidence 44566677777888889999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCeEEEecCCChhhHHhHHhhhcccccceeeecCCCCcchhhhhhhhhHhhhCCeEeccCCCCCcccccCccccccee
Q psy14622 487 KRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATLQDLAVATGGIVFGDEASPVKLEDLQATDLGSVG 566 (788)
Q Consensus 487 ~~rpLLIIAedi~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~~~LeDiAilTGg~vis~~~~g~~l~~v~~~~LG~a~ 566 (788)
.+.||||++++|+++||++|+.||++|+++++|||.|+||++|+..|+|||++|||++++++ .+.++++++.++||+|+
T Consensus 241 ~g~~lvi~~~~i~~~al~~l~~n~~~~~~~i~avr~~~~~~~r~~~l~~ia~~tG~~~i~~~-~~~~~~~~~~~~LG~~~ 319 (524)
T TIGR02348 241 SGKPLLIIAEDVEGEALATLVVNKLRGTLNVCAVKAPGFGDRRKAMLEDIAILTGGQVISEE-LGLKLEEVTLDDLGKAK 319 (524)
T ss_pred hCcCEEEECCCCChHHHHHHHHhhcccccceEEEECCCccchhhhhHHHHHHHhCCEEeccc-ccCCcCcCCHHHCCCce
Confidence 99999999999999999999999999999999999999999999999999999999999988 78889999999999999
Q ss_pred EEEEecCceEEEcCCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHhhcCCeEEEEecCCchhhHHHHHHHHHHHHH
Q psy14622 567 EIVITKDDTLILKGKGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSEVEVNEKKDRVTDALN 646 (788)
Q Consensus 567 ~V~vt~d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~~~~~~L~eRla~LsggvAvI~VGG~Te~EikErk~r~edAl~ 646 (788)
+|++++++|++++|.++++.+..|+++|+++++++.++|+|++|+|||+||+|++++|.+||+|+.+++|++++++||+|
T Consensus 320 ~v~~~~~~~~~i~~~~~~~~~~~ri~~l~~~~~~~~~~~~~~~l~eR~~~l~~~~~tI~irG~t~~~l~E~er~i~Dal~ 399 (524)
T TIGR02348 320 KVTVDKDNTTIVEGAGDKAAIKARVAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIKVGAATETEMKEKKLRVEDALN 399 (524)
T ss_pred EEEEeecEEEEEcCCCCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccccCCchhHhhHHHHhhhhhccCccccCCChhhHHHHHHHHHHHHHhhcChhHHHHHHHHHHHhccCeEEE
Q psy14622 647 ATRAAVEEGIVPGGGTALLRCIAVLDKLETANADQATGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVL 726 (788)
Q Consensus 647 a~raA~e~GiVpGGG~all~as~~L~~~~~~~~~~~~G~~~~i~~r~~~l~~~~~~~~~~~d~~~l~eRla~Lsggvavi 726 (788)
++|+|+++|||||||+++++++..|.+....+.+++.|
T Consensus 400 ~~r~a~~~g~VpGGGa~e~~~s~~L~~~~~~~~~~~~~------------------------------------------ 437 (524)
T TIGR02348 400 ATRAAVEEGIVPGGGVALLRAAAALEGLKGDNEDEAIG------------------------------------------ 437 (524)
T ss_pred HHHHHHhcCCccCCcHHHHHHHHHHHHhccCChHHHHH------------------------------------------
Confidence 99999999999999999999999987632222233333
Q ss_pred EecccHHHHHHHHhcchHHHHHHHhCCchHHHHHHHhcCCCCeeEEcCCCcccchhhcCC
Q psy14622 727 KVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVLESSGEMGYDAMNNEYVNMIQKVL 786 (788)
Q Consensus 727 ~vGa~~~e~~e~~~r~~~a~~a~~Aa~e~g~Vv~~~~~~~~~~Gyda~~~~~~dm~~~Gi 786 (788)
++...++++.+.+++|.|||+++..|+.++++..+++|||+.+|+|+||++.||
T Consensus 438 ------~~~~a~AL~~ip~~La~NaG~d~~~v~~~l~~~~~~~G~d~~~g~~~d~~~~gI 491 (524)
T TIGR02348 438 ------IDIVKRALEAPLRQIAENAGKDGAVVAEKVKESKGNFGFNAATGEYEDLVEAGI 491 (524)
T ss_pred ------HHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhcCCCeeEeCcCCcccchhhccC
Confidence 899999999999999999999999999999876556999999999999999997
No 8
>PRK12850 groEL chaperonin GroEL; Reviewed
Probab=100.00 E-value=8.1e-90 Score=788.65 Aligned_cols=470 Identities=56% Similarity=0.889 Sum_probs=445.0
Q ss_pred eeccCCCCCcCCCCceeeeecCCCCceEeeChHHhhccccccccccChhhHHHHHHhhhcccccCCCchhHHHHHHHHHH
Q psy14622 7 EQSWGSPKITKDDGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIAK 86 (788)
Q Consensus 7 ~~~~~S~kiLGPkG~nkmI~~~~G~~~ITnDGvTIlk~I~l~d~~ehpgAkLl~e~A~~qd~evGDGTTTavVLA~aLL~ 86 (788)
.+.++|+ |||+||||||+++.|+++|||||+||+++|++++|++|+||+|++++|.+||+++||||||+++||++|++
T Consensus 24 a~~v~tT--LGP~G~~kmi~~~~G~~~ITnDG~tIlk~i~i~hp~~~~ga~ll~~~a~~qd~e~GDGTTt~viLa~~LL~ 101 (544)
T PRK12850 24 ANAVKVT--LGPKGRNVVLEKSFGAPRITKDGVTVAKEIELEDKFENMGAQMVKEVASKTNDLAGDGTTTATVLAQAIVR 101 (544)
T ss_pred HHHHhCC--cCCCCCCEEEECCCCCeeEeccHHHHHHHhcCCChhhhHHHHHHHHHHhhhcchhcCCcchHHHHHHHHHH
Confidence 4568899 99999999999999999999999999999999988888889999999999999999999999999999999
Q ss_pred HHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHhccCCchHHhhHHHHHHHHhhhccccccceee
Q psy14622 87 EGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVTTPEEIAQVATISANGDKAVGELISDAMKRVSAKVEFQDALVL 166 (788)
Q Consensus 87 eglklI~~Gi~P~~I~~Gi~~A~~~ile~L~~ls~~V~d~eeL~~VA~tSan~d~~Ig~LIadAv~kV~~~~e~~d~~IL 166 (788)
++.+++++|+||..|++||++|.+.++++|+++++++++.++|.++|++|+++++.+++++++|+.+
T Consensus 102 ~a~~li~~GihP~~I~~G~~~a~~~~~~~L~~~s~~v~~~~~l~~va~~s~~~~~~l~~lv~eAv~~------------- 168 (544)
T PRK12850 102 EGAKLVAAGMNPMDLKRGIDLAVAAVVDELKKIAKKVTSSKEIAQVATISANGDESIGEMIAEAMDK------------- 168 (544)
T ss_pred HHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCCHHHHHHHHHHHHHH-------------
Confidence 9999999999999999999999999999999999999888899999999999999999999999987
Q ss_pred eccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhcccccccccccccccccCCCccccccccc
Q psy14622 167 LSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRFGPEVRGLMLQG 246 (788)
Q Consensus 167 ite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~~~~~~~r~~~L~~ 246 (788)
T Consensus 169 -------------------------------------------------------------------------------- 168 (544)
T PRK12850 169 -------------------------------------------------------------------------------- 168 (544)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeecccccccCcccccccccccccccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeeccccCCcceeeEeee
Q psy14622 247 VDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVVG 326 (788)
Q Consensus 247 ~~i~~~~~~~tp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 326 (788)
T Consensus 169 -------------------------------------------------------------------------------- 168 (544)
T PRK12850 169 -------------------------------------------------------------------------------- 168 (544)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccccCCCCCchhhhhhhhhHHHHHHHH
Q psy14622 327 KEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFIIELKLVLEYYIQTY 406 (788)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (788)
T Consensus 169 -------------------------------------------------------------------------------- 168 (544)
T PRK12850 169 -------------------------------------------------------------------------------- 168 (544)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhhccCCCCcEEEecCCccceeEEEEEeeEecccccccccccccCCceeEeccceeecccccccchhhhHHHHHHHHh
Q psy14622 407 IYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESKISSIQSIIPALELANS 486 (788)
Q Consensus 407 ~~~~~kvG~dGvItveeg~~~~~~lev~eG~~fd~GylSpyfvt~~e~~~v~l~~p~ILitD~kI~~i~~IlP~Le~~~~ 486 (788)
+|.+|.|.++.++...+++++++||.|++||.+|||++++++|..+++||+||++|.+|+++++++|+++.+.+
T Consensus 169 ------vg~~g~i~v~~~~~~g~~~~~v~G~~~~~g~~~p~~~~~~~~~~~~~~n~~Ill~d~~i~~~~~i~~~l~~i~~ 242 (544)
T PRK12850 169 ------VGKEGVITVEEAKTLGTELDVVEGMQFDRGYLSPYFVTNPEKMRAELEDPYILLHEKKISNLQDLLPILEAVVQ 242 (544)
T ss_pred ------hcccCceeeEEccccCcceEEEEeEEecCccCcCccccccccCeEEEeCCEEEEEecccCCHHHHHHHHHHHHH
Confidence 34456677777766778899999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCeEEEecCCChhhHHhHHhhhcccccceeeecCCCCcchhhhhhhhhHhhhCCeEeccCCCCCcccccCccccccee
Q psy14622 487 KRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATLQDLAVATGGIVFGDEASPVKLEDLQATDLGSVG 566 (788)
Q Consensus 487 ~~rpLLIIAedi~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~~~LeDiAilTGg~vis~~~~g~~l~~v~~~~LG~a~ 566 (788)
.+.||||++++|+++||++|+.|+++|+++++|||.|+||++|+..|+|||.+|||++++++ .+..++++++++||+|+
T Consensus 243 ~g~~lvI~~~~I~d~al~~l~~n~i~~~~~~~avk~p~~g~~~~~~le~ia~~tG~~~i~~~-~~~~~~~~~~~~LG~~~ 321 (544)
T PRK12850 243 SGRPLLIIAEDVEGEALATLVVNKLRGGLKSVAVKAPGFGDRRKAMLEDIAVLTGGQVISED-LGIKLENVTLDMLGRAK 321 (544)
T ss_pred hCCCEEEECCCCChHHHHHHHHcCCcccceEEEEeCCCcCcccHHHHHHHHHHhCCEEeccc-cCCCcccCCHHHcCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999988 68889999999999999
Q ss_pred EEEEecCceEEEcCCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHhhcCCeEEEEecCCchhhHHHHHHHHHHHHH
Q psy14622 567 EIVITKDDTLILKGKGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSEVEVNEKKDRVTDALN 646 (788)
Q Consensus 567 ~V~vt~d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~~~~~~L~eRla~LsggvAvI~VGG~Te~EikErk~r~edAl~ 646 (788)
+|++++++|++++|.++++.+..|+++|+++++++.++|++++|+|||+||+|++++|.|||+|+.+++|++++++||+|
T Consensus 322 ~v~~~~~~~~~i~g~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~eR~~~l~~~~~tI~irG~t~~~l~E~er~i~DAl~ 401 (544)
T PRK12850 322 RVLITKENTTIIDGAGDKKNIEARVKQIRAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRVDDALH 401 (544)
T ss_pred EEEEEeeeEEEEeCCCCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhcCCeEEEEECCCcHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccccCCchhHhhHHHHhhhhhccCccccCCChhhHHHHHHHHHHHHHhhcChhHHHHHHHHHHHhccCeEEE
Q psy14622 647 ATRAAVEEGIVPGGGTALLRCIAVLDKLETANADQATGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVL 726 (788)
Q Consensus 647 a~raA~e~GiVpGGG~all~as~~L~~~~~~~~~~~~G~~~~i~~r~~~l~~~~~~~~~~~d~~~l~eRla~Lsggvavi 726 (788)
++|+|+++|||||||+++++++..|.++...+.+++.|
T Consensus 402 ~~k~a~~~g~VpGGGa~e~~~s~~L~~~~~~~~~~~~~------------------------------------------ 439 (544)
T PRK12850 402 ATRAAVEEGIVPGGGVALLRARSALRGLKGANADETAG------------------------------------------ 439 (544)
T ss_pred HHHHHHhcCCccCCcHHHHHHHHHHHhccCCChHHHHH------------------------------------------
Confidence 99999999999999999999999997663223333444
Q ss_pred EecccHHHHHHHHhcchHHHHHHHhCCchHHHHHHHhcCCCCeeEEcCCCcccchhhcCC
Q psy14622 727 KVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVLESSGEMGYDAMNNEYVNMIQKVL 786 (788)
Q Consensus 727 ~vGa~~~e~~e~~~r~~~a~~a~~Aa~e~g~Vv~~~~~~~~~~Gyda~~~~~~dm~~~Gi 786 (788)
++.+.++++.+.+++|.|||++...|+.++++...++|||+.+|+|+||++.||
T Consensus 440 ------i~~~a~Al~~ip~~La~NaG~d~~~v~~~l~~~~~~~G~d~~~g~~~d~~~~gI 493 (544)
T PRK12850 440 ------IDIVRRALEEPLRQIATNAGFEGSVVVGKVAELPGNFGFNAQTGEYGDMVEAGI 493 (544)
T ss_pred ------HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHhhCCCcceeCCCCcccchhhccC
Confidence 899999999999999999999999999999876667999999999999999997
No 9
>PRK12851 groEL chaperonin GroEL; Reviewed
Probab=100.00 E-value=1e-89 Score=787.40 Aligned_cols=470 Identities=57% Similarity=0.885 Sum_probs=443.9
Q ss_pred eeccCCCCCcCCCCceeeeecCCCCceEeeChHHhhccccccccccChhhHHHHHHhhhcccccCCCchhHHHHHHHHHH
Q psy14622 7 EQSWGSPKITKDDGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIAK 86 (788)
Q Consensus 7 ~~~~~S~kiLGPkG~nkmI~~~~G~~~ITnDGvTIlk~I~l~d~~ehpgAkLl~e~A~~qd~evGDGTTTavVLA~aLL~ 86 (788)
.+.++|+ |||+||||||+++.|+++|||||+||+++|++++|++|++|+|++++|.+||+++||||||+++||++|++
T Consensus 24 a~~v~tT--lGP~G~~kmi~~~~g~~~ITnDG~tIlk~i~~~hp~~~~~akll~~~a~~qd~e~GDGTTtvviLa~~LL~ 101 (541)
T PRK12851 24 ADAVKVT--LGPKGRNVVIDKSFGAPTITNDGVTIAKEIELEDKFENMGAQMVREVASKTNDVAGDGTTTATVLAQAIVR 101 (541)
T ss_pred HHHHhcC--CCCCCCCEEEECCCCCeeEecCHHHHHHHccCCCchhhHHHHHHHHHHHhhhHhhCCCccHHHHHHHHHHH
Confidence 4568899 99999999999999999999999999999999977777799999999999999999999999999999999
Q ss_pred HHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHhccCCchHHhhHHHHHHHHhhhccccccceee
Q psy14622 87 EGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVTTPEEIAQVATISANGDKAVGELISDAMKRVSAKVEFQDALVL 166 (788)
Q Consensus 87 eglklI~~Gi~P~~I~~Gi~~A~~~ile~L~~ls~~V~d~eeL~~VA~tSan~d~~Ig~LIadAv~kV~~~~e~~d~~IL 166 (788)
++.+++++|+||..|++||++|.+.+++.|+++++|+++.+++.+||++|++.++.+++++++|+.+
T Consensus 102 ~a~~li~~Gihp~~I~~G~~~a~~~~~~~L~~~s~~~~~~~~l~~va~~s~~~~~~l~~lv~~Av~~------------- 168 (541)
T PRK12851 102 EGAKAVAAGANPMDLKRGIDRAVAAVVEELKANARPVTTNAEIAQVATISANGDAEIGRLVAEAMEK------------- 168 (541)
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhccChHHHHHHHHHHHHH-------------
Confidence 9999999999999999999999999999999999999888899999999998899999999999987
Q ss_pred eccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhcccccccccccccccccCCCccccccccc
Q psy14622 167 LSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRFGPEVRGLMLQG 246 (788)
Q Consensus 167 ite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~~~~~~~r~~~L~~ 246 (788)
T Consensus 169 -------------------------------------------------------------------------------- 168 (541)
T PRK12851 169 -------------------------------------------------------------------------------- 168 (541)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeecccccccCcccccccccccccccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeeccccCCcceeeEeee
Q psy14622 247 VDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVVG 326 (788)
Q Consensus 247 ~~i~~~~~~~tp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 326 (788)
T Consensus 169 -------------------------------------------------------------------------------- 168 (541)
T PRK12851 169 -------------------------------------------------------------------------------- 168 (541)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccccCCCCCchhhhhhhhhHHHHHHHH
Q psy14622 327 KEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFIIELKLVLEYYIQTY 406 (788)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (788)
T Consensus 169 -------------------------------------------------------------------------------- 168 (541)
T PRK12851 169 -------------------------------------------------------------------------------- 168 (541)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhhccCCCCcEEEecCCccceeEEEEEeeEecccccccccccccCCceeEeccceeecccccccchhhhHHHHHHHHh
Q psy14622 407 IYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESKISSIQSIIPALELANS 486 (788)
Q Consensus 407 ~~~~~kvG~dGvItveeg~~~~~~lev~eG~~fd~GylSpyfvt~~e~~~v~l~~p~ILitD~kI~~i~~IlP~Le~~~~ 486 (788)
+|.+|.|.++.+++..+++++++||.|++||.+|||++++++|..+++||+||++|.+|+++++++|+++.+.+
T Consensus 169 ------vg~~g~i~i~~~~~~~~~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~~~~~Ilv~d~~i~~~~~i~~~l~~i~~ 242 (541)
T PRK12851 169 ------VGNEGVITVEESKTAETELEVVEGMQFDRGYLSPYFVTDADKMEAELEDPYILIHEKKISNLQDLLPVLEAVVQ 242 (541)
T ss_pred ------hcccCceEEEEccCCCcceEEEEEEEecCCccccccccCCCCCeEEecccEEEEEcCCcCcHHHHHHHHHHHHH
Confidence 34455667777777778899999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCeEEEecCCChhhHHhHHhhhcccccceeeecCCCCcchhhhhhhhhHhhhCCeEeccCCCCCcccccCccccccee
Q psy14622 487 KRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATLQDLAVATGGIVFGDEASPVKLEDLQATDLGSVG 566 (788)
Q Consensus 487 ~~rpLLIIAedi~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~~~LeDiAilTGg~vis~~~~g~~l~~v~~~~LG~a~ 566 (788)
.+.||||++++|+++||++|+.|+++|+++++|||.|+||+.|+..|+|||.+|||++++.+ .+..++++++++||+|+
T Consensus 243 ~~~~lvi~~~~I~~~al~~l~~n~i~g~~~i~av~~p~~~~~~~~~l~~ia~~tGa~~i~~~-~~~~~~~~~~~~LG~~~ 321 (541)
T PRK12851 243 SGKPLLIIAEDVEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIAILTGGTVISED-LGIKLENVTLEQLGRAK 321 (541)
T ss_pred hCcCEEEECCCCChHHHHHHHHcCCcCceeEEEEecCccccccHhHHHHHHHHhCCEEeccC-CCCCcCcCCHHHcCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999988 67789999999999999
Q ss_pred EEEEecCceEEEcCCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHhhcCCeEEEEecCCchhhHHHHHHHHHHHHH
Q psy14622 567 EIVITKDDTLILKGKGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSEVEVNEKKDRVTDALN 646 (788)
Q Consensus 567 ~V~vt~d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~~~~~~L~eRla~LsggvAvI~VGG~Te~EikErk~r~edAl~ 646 (788)
+|++++++|++++|.++++++..|+++|+++++.+.++|+|++|+|||+||+|++++|.|||+|+.+++|++++++||+|
T Consensus 322 ~v~~~~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~~ri~~l~g~~~tI~irG~t~~~l~E~er~i~DAl~ 401 (541)
T PRK12851 322 KVVVEKENTTIIDGAGSKTEIEGRVAQIRAQIEETTSDYDREKLQERLAKLAGGVAVIRVGASTEVEVKEKKDRVDDALH 401 (541)
T ss_pred EEEEEcceEEEEcCCCCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccccCCchhHhhHHHHhhhhhccCccccCCChhhHHHHHHHHHHHHHhhcChhHHHHHHHHHHHhccCeEEE
Q psy14622 647 ATRAAVEEGIVPGGGTALLRCIAVLDKLETANADQATGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVL 726 (788)
Q Consensus 647 a~raA~e~GiVpGGG~all~as~~L~~~~~~~~~~~~G~~~~i~~r~~~l~~~~~~~~~~~d~~~l~eRla~Lsggvavi 726 (788)
|+|+|+++|||||||+++++|+..|.++...+.+++.|
T Consensus 402 a~~~al~~g~VpGGGa~e~~~s~~L~~~~~~~~~~~~~------------------------------------------ 439 (541)
T PRK12851 402 ATRAAVEEGIVPGGGVALLRAVKALDKLETANGDQRTG------------------------------------------ 439 (541)
T ss_pred HHHHHHHcCcccCchHHHHHHHHHHHHHhcCCcHHHHH------------------------------------------
Confidence 99999999999999999999999987654323233333
Q ss_pred EecccHHHHHHHHhcchHHHHHHHhCCchHHHHHHHhcCCCCeeEEcCCCcccchhhcCC
Q psy14622 727 KVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVLESSGEMGYDAMNNEYVNMIQKVL 786 (788)
Q Consensus 727 ~vGa~~~e~~e~~~r~~~a~~a~~Aa~e~g~Vv~~~~~~~~~~Gyda~~~~~~dm~~~Gi 786 (788)
++...++++.+.+++|.|||++...|+.++++...+||||+.+|+|+||++.||
T Consensus 440 ------~~~~a~AL~~ip~~La~NaG~d~~~vl~~l~~~~~~~G~d~~~g~~~d~~~~GI 493 (541)
T PRK12851 440 ------VEIVRRALEAPVRQIAENAGAEGSVVVGKLREKPGGYGFNAATNEYGDLYAQGV 493 (541)
T ss_pred ------HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHhhCCCeeeeCCCCCccchhhccC
Confidence 899999999999999999999999999999876667999999999999999997
No 10
>PRK00013 groEL chaperonin GroEL; Reviewed
Probab=100.00 E-value=1.6e-89 Score=785.54 Aligned_cols=471 Identities=57% Similarity=0.881 Sum_probs=444.4
Q ss_pred EeeccCCCCCcCCCCceeeeecCCCCceEeeChHHhhccccccccccChhhHHHHHHhhhcccccCCCchhHHHHHHHHH
Q psy14622 6 LEQSWGSPKITKDDGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIA 85 (788)
Q Consensus 6 i~~~~~S~kiLGPkG~nkmI~~~~G~~~ITnDGvTIlk~I~l~d~~ehpgAkLl~e~A~~qd~evGDGTTTavVLA~aLL 85 (788)
+.+.++|+ |||+||||||+++.|+++|||||+||+|+|++++|++|++|+|++++|.+||+++||||||+++||++|+
T Consensus 22 ia~~v~tt--LGP~G~~kmi~~~~g~~~ITnDG~tIlk~i~~~hp~~~~~akll~e~a~~qd~e~GDGTTtvviLa~~LL 99 (542)
T PRK00013 22 LADAVKVT--LGPKGRNVVLEKSFGAPTITKDGVTVAKEIELEDPFENMGAQLVKEVASKTNDVAGDGTTTATVLAQAIV 99 (542)
T ss_pred HHHHhhcc--CCCCCCCEEEECCCCCeeEeccHHHHHHHccCCCchhhHHHHHHHHHHHhcCcccCCccchHHHHHHHHH
Confidence 34678899 9999999999999999999999999999999996666669999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHhccCCchHHhhHHHHHHHHhhhcccccccee
Q psy14622 86 KEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVTTPEEIAQVATISANGDKAVGELISDAMKRVSAKVEFQDALV 165 (788)
Q Consensus 86 ~eglklI~~Gi~P~~I~~Gi~~A~~~ile~L~~ls~~V~d~eeL~~VA~tSan~d~~Ig~LIadAv~kV~~~~e~~d~~I 165 (788)
+++.+++++|+||..|++||+.|.+.+++.|+++++|+++.+++.++|++|+++++.+++++++|+..
T Consensus 100 ~~a~~li~~Gi~P~~I~~G~~~A~~~~~~~L~~~a~~~~~~~~l~~va~ts~~~~~~ls~lv~~Av~~------------ 167 (542)
T PRK00013 100 REGLKNVAAGANPMDLKRGIDKAVEAAVEELKKISKPVEDKEEIAQVATISANGDEEIGKLIAEAMEK------------ 167 (542)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHhcccchHHHHHHHHHHHHH------------
Confidence 99999999999999999999999999999999999999988999999999999999999999999987
Q ss_pred eeccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhcccccccccccccccccCCCcccccccc
Q psy14622 166 LLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRFGPEVRGLMLQ 245 (788)
Q Consensus 166 Lite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~~~~~~~r~~~L~ 245 (788)
T Consensus 168 -------------------------------------------------------------------------------- 167 (542)
T PRK00013 168 -------------------------------------------------------------------------------- 167 (542)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceeecccccccCcccccccccccccccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeeccccCCcceeeEee
Q psy14622 246 GVDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVV 325 (788)
Q Consensus 246 ~~~i~~~~~~~tp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 325 (788)
T Consensus 168 -------------------------------------------------------------------------------- 167 (542)
T PRK00013 168 -------------------------------------------------------------------------------- 167 (542)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccccCCCCCchhhhhhhhhHHHHHHH
Q psy14622 326 GKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFIIELKLVLEYYIQT 405 (788)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (788)
T Consensus 168 -------------------------------------------------------------------------------- 167 (542)
T PRK00013 168 -------------------------------------------------------------------------------- 167 (542)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhhccCCCCcEEEecCCccceeEEEEEeeEecccccccccccccCCceeEeccceeecccccccchhhhHHHHHHHH
Q psy14622 406 YIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESKISSIQSIIPALELAN 485 (788)
Q Consensus 406 ~~~~~~kvG~dGvItveeg~~~~~~lev~eG~~fd~GylSpyfvt~~e~~~v~l~~p~ILitD~kI~~i~~IlP~Le~~~ 485 (788)
+|.+|.|+|+.+++..+++++++|+.|++||.+|||++++++|..+++||+||++|.+|+++++++|+++++.
T Consensus 168 -------v~~~g~i~i~~~~~~~~~~~~v~G~~~~~g~~~~~~~~~~~~~~~~~~n~~Ilv~d~~i~~~~~l~~~l~~i~ 240 (542)
T PRK00013 168 -------VGKEGVITVEESKGFETELEVVEGMQFDRGYLSPYFVTDPEKMEAELENPYILITDKKISNIQDLLPVLEQVA 240 (542)
T ss_pred -------hCcCCcEEEEEcCCCCceEEEEEeEEecCCcccccccccccCCeEEEecCEEEEEcCccCCHHHHHHHHHHHH
Confidence 3445667888888888899999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCeEEEecCCChhhHHhHHhhhcccccceeeecCCCCcchhhhhhhhhHhhhCCeEeccCCCCCcccccCcccccce
Q psy14622 486 SKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATLQDLAVATGGIVFGDEASPVKLEDLQATDLGSV 565 (788)
Q Consensus 486 ~~~rpLLIIAedi~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~~~LeDiAilTGg~vis~~~~g~~l~~v~~~~LG~a 565 (788)
+.+.||||++++|+++||++|+.|+++|+++++|||.|+||++|+..|+|||.+|||++++++ .|..++++++++||+|
T Consensus 241 ~~g~~lvi~~~~I~~~al~~l~~~~~~g~~~i~avr~~~~~~~r~~~l~~ia~~tG~~~i~~~-~~~~~~~~~~~~LG~~ 319 (542)
T PRK00013 241 QSGKPLLIIAEDVEGEALATLVVNKLRGTLKVVAVKAPGFGDRRKAMLEDIAILTGGTVISEE-LGLKLEDATLEDLGQA 319 (542)
T ss_pred HhCCCEEEECCCCcHHHHHHHHHcCCcccceEEEEecCCcccchhhhHHHHHHHcCCEEeccc-ccCCcccCCHHHCCee
Confidence 999999999999999999999999999999999999999999999999999999999999988 7888999999999999
Q ss_pred eEEEEecCceEEEcCCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHhhcCCeEEEEecCCchhhHHHHHHHHHHHH
Q psy14622 566 GEIVITKDDTLILKGKGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSEVEVNEKKDRVTDAL 645 (788)
Q Consensus 566 ~~V~vt~d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~~~~~~L~eRla~LsggvAvI~VGG~Te~EikErk~r~edAl 645 (788)
.+|++++++|+++++.++++.+..|+++|+.+++.+.++|+|++|+|||+||+|++++|.|||+|+.+++|++++++||+
T Consensus 320 ~~v~~~~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~eRi~~l~g~~~tI~irG~t~~~l~E~er~i~Dal 399 (542)
T PRK00013 320 KKVVVTKDNTTIVDGAGDKEAIKARVAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIKVGAATEVEMKEKKDRVEDAL 399 (542)
T ss_pred eEEEEecCEEEEEeCCCCHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccccCCchhHhhHHHHhhhhhccCccccCCChhhHHHHHHHHHHHHHhhcChhHHHHHHHHHHHhccCeEE
Q psy14622 646 NATRAAVEEGIVPGGGTALLRCIAVLDKLETANADQATGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAV 725 (788)
Q Consensus 646 ~a~raA~e~GiVpGGG~all~as~~L~~~~~~~~~~~~G~~~~i~~r~~~l~~~~~~~~~~~d~~~l~eRla~Lsggvav 725 (788)
|++|+|+++|||||||+++++++..|.++...+.+++.|
T Consensus 400 ~~vk~al~~g~VpGGGa~e~~~s~~L~~~~~~~~~~~~~----------------------------------------- 438 (542)
T PRK00013 400 HATRAAVEEGIVPGGGVALLRAAPALEALKGLNGDEATG----------------------------------------- 438 (542)
T ss_pred HHHHHHHHcCcccCcHHHHHHHHHHHHHhcCCChHHHHH-----------------------------------------
Confidence 999999999999999999999999987652222233333
Q ss_pred EEecccHHHHHHHHhcchHHHHHHHhCCchHHHHHHHhcC-CCCeeEEcCCCcccchhhcCC
Q psy14622 726 LKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVLES-SGEMGYDAMNNEYVNMIQKVL 786 (788)
Q Consensus 726 i~vGa~~~e~~e~~~r~~~a~~a~~Aa~e~g~Vv~~~~~~-~~~~Gyda~~~~~~dm~~~Gi 786 (788)
++...++++.+.+++|.|||++...|+.++++. ..++|||+.+|+|+||++.||
T Consensus 439 -------i~~~a~Al~~ip~~La~NaG~d~~~vl~~l~~~~~~~~G~d~~~g~~~d~~~~gI 493 (542)
T PRK00013 439 -------INIVLRALEAPLRQIAENAGLEGSVVVEKVKNGKGKGYGYNAATGEYVDMIEAGI 493 (542)
T ss_pred -------HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhcCCCEeEeCCCCceeehhhccC
Confidence 899999999999999999999999999999763 456899999999999999997
No 11
>PRK12849 groEL chaperonin GroEL; Reviewed
Probab=100.00 E-value=4.5e-89 Score=781.98 Aligned_cols=471 Identities=58% Similarity=0.895 Sum_probs=445.7
Q ss_pred EeeccCCCCCcCCCCceeeeecCCCCceEeeChHHhhccccccccccChhhHHHHHHhhhcccccCCCchhHHHHHHHHH
Q psy14622 6 LEQSWGSPKITKDDGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIA 85 (788)
Q Consensus 6 i~~~~~S~kiLGPkG~nkmI~~~~G~~~ITnDGvTIlk~I~l~d~~ehpgAkLl~e~A~~qd~evGDGTTTavVLA~aLL 85 (788)
+.+.++|+ |||+||||||+++.|+++|||||+||+++|++++|++|++|+|++++|.+||+++||||||+++||++|+
T Consensus 22 la~~v~tT--LGP~G~~kmi~~~~g~~~ITnDGaTIlk~i~~~hp~~~~~a~ll~~~a~~qd~e~GDGTTtvviLageLL 99 (542)
T PRK12849 22 LADAVKVT--LGPKGRNVVIDKSFGAPTITKDGVSIAKEIELEDPFENLGAQLVKEVASKTNDVAGDGTTTATVLAQALV 99 (542)
T ss_pred HHHHHhcc--cCCCCCCEEEECCCCCeeEeccHHHHHHHcccCCccHhHHHHHHHHHHHhcCCccCCCccHHHHHHHHHH
Confidence 34678899 9999999999999999999999999999999996666669999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHhccCCchHHhhHHHHHHHHhhhcccccccee
Q psy14622 86 KEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVTTPEEIAQVATISANGDKAVGELISDAMKRVSAKVEFQDALV 165 (788)
Q Consensus 86 ~eglklI~~Gi~P~~I~~Gi~~A~~~ile~L~~ls~~V~d~eeL~~VA~tSan~d~~Ig~LIadAv~kV~~~~e~~d~~I 165 (788)
+++.+++++|+||..|++||++|.+.+++.|+++++|+++.+++.++|++|+++++.+++++++|+.+
T Consensus 100 ~~a~~li~~GihP~~I~~G~~~A~~~~~~~L~~~s~~~~~~~~l~~va~ts~~~~~~l~~lv~~Av~~------------ 167 (542)
T PRK12849 100 QEGLKNVAAGANPMDLKRGIDKAVEAVVEELKALARPVSGSEEIAQVATISANGDEEIGELIAEAMEK------------ 167 (542)
T ss_pred HHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCChHHHHHHHHHHHHH------------
Confidence 99999999999999999999999999999999999999988899999999999999999999999987
Q ss_pred eeccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhcccccccccccccccccCCCcccccccc
Q psy14622 166 LLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRFGPEVRGLMLQ 245 (788)
Q Consensus 166 Lite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~~~~~~~r~~~L~ 245 (788)
T Consensus 168 -------------------------------------------------------------------------------- 167 (542)
T PRK12849 168 -------------------------------------------------------------------------------- 167 (542)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceeecccccccCcccccccccccccccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeeccccCCcceeeEee
Q psy14622 246 GVDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVV 325 (788)
Q Consensus 246 ~~~i~~~~~~~tp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 325 (788)
T Consensus 168 -------------------------------------------------------------------------------- 167 (542)
T PRK12849 168 -------------------------------------------------------------------------------- 167 (542)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccccCCCCCchhhhhhhhhHHHHHHH
Q psy14622 326 GKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFIIELKLVLEYYIQT 405 (788)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (788)
T Consensus 168 -------------------------------------------------------------------------------- 167 (542)
T PRK12849 168 -------------------------------------------------------------------------------- 167 (542)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhhccCCCCcEEEecCCccceeEEEEEeeEecccccccccccccCCceeEeccceeecccccccchhhhHHHHHHHH
Q psy14622 406 YIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESKISSIQSIIPALELAN 485 (788)
Q Consensus 406 ~~~~~~kvG~dGvItveeg~~~~~~lev~eG~~fd~GylSpyfvt~~e~~~v~l~~p~ILitD~kI~~i~~IlP~Le~~~ 485 (788)
+|.+|.+.++.|.+.+|++++++|+.|++||.+|||+++.++|...++||+||++|.+|++.+++.|+++++.
T Consensus 168 -------v~~~g~i~i~~g~~~~d~~~~v~G~~~~~g~~~~~~~~~~~~~~~~~~n~~Ili~d~~i~~~~~~~~~l~~i~ 240 (542)
T PRK12849 168 -------VGKDGVITVEESKTLETELEVTEGMQFDRGYLSPYFVTDPERMEAVLEDPLILLTDKKISSLQDLLPLLEKVA 240 (542)
T ss_pred -------hccCCcEeEEeCCCcceeEEEEEeEEEecCcccCcccccccCceEEeeCcEEEeecCCcCCHHHHHHHHHHHH
Confidence 3445667777888888999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCeEEEecCCChhhHHhHHhhhcccccceeeecCCCCcchhhhhhhhhHhhhCCeEeccCCCCCcccccCcccccce
Q psy14622 486 SKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATLQDLAVATGGIVFGDEASPVKLEDLQATDLGSV 565 (788)
Q Consensus 486 ~~~rpLLIIAedi~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~~~LeDiAilTGg~vis~~~~g~~l~~v~~~~LG~a 565 (788)
+.+.||||++++|+++||++|+.|+++|.++++|||.|+||++|+..|+|||.+|||++++++ .+..+++++.++||+|
T Consensus 241 ~~~~~lvI~~~~I~~~al~~l~~~~~~~~~~i~avr~~~~~~~r~~~l~~ia~~tGa~~v~~~-~~~~~~~~~~~~LG~~ 319 (542)
T PRK12849 241 QSGKPLLIIAEDVEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIAILTGGTVISED-LGLKLEEVTLDDLGRA 319 (542)
T ss_pred HhCCCEEEECCCCcHHHHHHHHHhhhhccccEEEEeCCCccchhHhHHHHHHHHhCCEEeccc-ccCCcccCCHHHCcee
Confidence 999999999999999999999999999999999999999999999999999999999999988 6778999999999999
Q ss_pred eEEEEecCceEEEcCCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHhhcCCeEEEEecCCchhhHHHHHHHHHHHH
Q psy14622 566 GEIVITKDDTLILKGKGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSEVEVNEKKDRVTDAL 645 (788)
Q Consensus 566 ~~V~vt~d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~~~~~~L~eRla~LsggvAvI~VGG~Te~EikErk~r~edAl 645 (788)
++|++++++|++++|.++++++..|+++|+++++++.++|++++|+||++||+|++++|.+||+|+.+++|++++++||+
T Consensus 320 ~~v~~~~~~~~~i~g~~~~~~i~~r~~~l~~~~~~~~~~~~~~~l~eR~~~l~~~~~TI~irG~t~~~l~E~er~i~DAl 399 (542)
T PRK12849 320 KRVTITKDNTTIVDGAGDKEAIEARVAQIRRQIEETTSDYDREKLQERLAKLAGGVAVIKVGAATEVELKERKDRVEDAL 399 (542)
T ss_pred eEEEEeeeeEEEEeCCCCHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHhcCCeEEEEeCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccccCCchhHhhHHHHhhhhhccCccccCCChhhHHHHHHHHHHHHHhhcChhHHHHHHHHHHHhccCeEE
Q psy14622 646 NATRAAVEEGIVPGGGTALLRCIAVLDKLETANADQATGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAV 725 (788)
Q Consensus 646 ~a~raA~e~GiVpGGG~all~as~~L~~~~~~~~~~~~G~~~~i~~r~~~l~~~~~~~~~~~d~~~l~eRla~Lsggvav 725 (788)
|++|+|+++|||||||+++++++..|.++...+.+++.|
T Consensus 400 ~~~~~a~~~g~VpGGGa~e~~ls~~L~~~~~~~g~~~~~----------------------------------------- 438 (542)
T PRK12849 400 NATRAAVEEGIVPGGGVALLRAAKALDELAGLNGDQAAG----------------------------------------- 438 (542)
T ss_pred HHHHHHHHcCeecCCCHHHHHHHHHHHHhhCCChHHHHH-----------------------------------------
Confidence 999999999999999999999999997654222233333
Q ss_pred EEecccHHHHHHHHhcchHHHHHHHhCCchHHHHHHHhcCCCCeeEEcCCCcccchhhcCC
Q psy14622 726 LKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVLESSGEMGYDAMNNEYVNMIQKVL 786 (788)
Q Consensus 726 i~vGa~~~e~~e~~~r~~~a~~a~~Aa~e~g~Vv~~~~~~~~~~Gyda~~~~~~dm~~~Gi 786 (788)
++...++++.+.+++|.|||+++..|+.++++....+|||+.+|+|+||++.||
T Consensus 439 -------i~~~a~Al~~ip~~La~NaG~d~~~vi~~L~~~~~~~G~d~~~g~~~d~~~~GV 492 (542)
T PRK12849 439 -------VEIVRRALEAPLRQIAENAGLDGSVVVAKVLELEDGFGFNAATGEYGDLIAAGI 492 (542)
T ss_pred -------HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHhhCCCcceeCCCCccccHHhccC
Confidence 899999999999999999999999999999876667999999999999999997
No 12
>cd03344 GroEL GroEL_like type I chaperonin. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings, each composed of 7-9 subunits. The symmetry of type I is seven-fold and they are found in eubacteria (GroEL) and in organelles of eubacterial descent (hsp60 and RBP). With the aid of cochaperonin GroES, GroEL encapsulates non-native substrate proteins inside the cavity of the GroEL-ES complex and promotes folding by using energy derived from ATP hydrolysis.
Probab=100.00 E-value=5.5e-88 Score=770.11 Aligned_cols=471 Identities=61% Similarity=0.936 Sum_probs=445.6
Q ss_pred EeeccCCCCCcCCCCceeeeecCCCCceEeeChHHhhccccccccccChhhHHHHHHhhhcccccCCCchhHHHHHHHHH
Q psy14622 6 LEQSWGSPKITKDDGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIA 85 (788)
Q Consensus 6 i~~~~~S~kiLGPkG~nkmI~~~~G~~~ITnDGvTIlk~I~l~d~~ehpgAkLl~e~A~~qd~evGDGTTTavVLA~aLL 85 (788)
+.+.++|+ |||+||||||+++.|+|+|||||+||+++|++++|+++++|+|++++|.+||+++||||||+++||++|+
T Consensus 20 l~~~v~tt--lGP~G~~kmi~~~~g~~~iTnDG~tIlk~i~~~hp~~~~~a~ll~~~a~~qd~e~GDGTTtvviLa~~Ll 97 (520)
T cd03344 20 LADAVKVT--LGPKGRNVVIEKSFGSPKITKDGVTVAKEIELEDPFENMGAQLVKEVASKTNDVAGDGTTTATVLARAII 97 (520)
T ss_pred HHHHHhCC--cCCCCCcEEEECCCCCeEEEecHHHHHHHcccCCcchhHHHHHHHHHHhhhccccCCCcchHHHHHHHHH
Confidence 34668899 9999999999999999999999999999999996666669999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHhccCCchHHhhHHHHHHHHhhhcccccccee
Q psy14622 86 KEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVTTPEEIAQVATISANGDKAVGELISDAMKRVSAKVEFQDALV 165 (788)
Q Consensus 86 ~eglklI~~Gi~P~~I~~Gi~~A~~~ile~L~~ls~~V~d~eeL~~VA~tSan~d~~Ig~LIadAv~kV~~~~e~~d~~I 165 (788)
+++.+++++|+||..|++||+.|.+.+++.|+++++|+++.+++.++|++|+++++.+++++++|+..
T Consensus 98 ~~~~~li~~gi~p~~I~~G~~~a~~~~~~~L~~~~~~i~~~~~l~~va~ts~~~~~~l~~lv~~A~~~------------ 165 (520)
T cd03344 98 KEGLKAVAAGANPMDLKRGIEKAVEAVVEELKKLSKPVKTKEEIAQVATISANGDEEIGELIAEAMEK------------ 165 (520)
T ss_pred HHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCChHHHHHHHHHHHHH------------
Confidence 99999999999999999999999999999999999999999999999999999999999999999986
Q ss_pred eeccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhcccccccccccccccccCCCcccccccc
Q psy14622 166 LLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRFGPEVRGLMLQ 245 (788)
Q Consensus 166 Lite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~~~~~~~r~~~L~ 245 (788)
T Consensus 166 -------------------------------------------------------------------------------- 165 (520)
T cd03344 166 -------------------------------------------------------------------------------- 165 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceeecccccccCcccccccccccccccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeeccccCCcceeeEee
Q psy14622 246 GVDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVV 325 (788)
Q Consensus 246 ~~~i~~~~~~~tp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 325 (788)
T Consensus 166 -------------------------------------------------------------------------------- 165 (520)
T cd03344 166 -------------------------------------------------------------------------------- 165 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccccCCCCCchhhhhhhhhHHHHHHH
Q psy14622 326 GKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFIIELKLVLEYYIQT 405 (788)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (788)
T Consensus 166 -------------------------------------------------------------------------------- 165 (520)
T cd03344 166 -------------------------------------------------------------------------------- 165 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhhccCCCCcEEEecCCccceeEEEEEeeEecccccccccccccCCceeEeccceeecccccccchhhhHHHHHHHH
Q psy14622 406 YIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESKISSIQSIIPALELAN 485 (788)
Q Consensus 406 ~~~~~~kvG~dGvItveeg~~~~~~lev~eG~~fd~GylSpyfvt~~e~~~v~l~~p~ILitD~kI~~i~~IlP~Le~~~ 485 (788)
+|.+|.|+++.|.+..|++++++||.|++||.+|||++++++|..+++||+||++|..|+++++++|+++.+.
T Consensus 166 -------v~~~~~i~v~~g~~~~d~~~~~~G~~~~~g~~~~~~~~~~~~~~~~~~n~~Ili~d~~l~~~~~l~~~l~~i~ 238 (520)
T cd03344 166 -------VGKDGVITVEEGKTLETELEVVEGMQFDRGYLSPYFVTDPEKMEVELENPYILLTDKKISSIQELLPILELVA 238 (520)
T ss_pred -------hccCCcEEEEeCCCcceeEEEEeeEEecCCCCCCccccCcccCeEEeeCCEEEEECCCCCCHHHHHHHHHHHH
Confidence 3445667778888999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCeEEEecCCChhhHHhHHhhhcccccceeeecCCCCcchhhhhhhhhHhhhCCeEeccCCCCCcccccCcccccce
Q psy14622 486 SKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATLQDLAVATGGIVFGDEASPVKLEDLQATDLGSV 565 (788)
Q Consensus 486 ~~~rpLLIIAedi~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~~~LeDiAilTGg~vis~~~~g~~l~~v~~~~LG~a 565 (788)
+.+.||||++++|+++||++|+.|+++|+++++|||.|+||+.|+..|+|||.+|||++++++ .+..+++++.++||+|
T Consensus 239 ~~~~~lvi~~~~i~~~al~~l~~~~i~~~~~v~avk~~~~~~~~~~~l~~la~~tGa~~~~~~-~~~~~~~~~~~~LG~~ 317 (520)
T cd03344 239 KAGRPLLIIAEDVEGEALATLVVNKLRGGLKVCAVKAPGFGDRRKAMLEDIAILTGGTVISEE-LGLKLEDVTLEDLGRA 317 (520)
T ss_pred hhCCCEEEEcCCCCHHHHHHHHHcCCccCceEEEEeCCCCCcccHHHHHHHHHHhCCEEeccc-ccCCcccCCHHHCCcc
Confidence 999999999999999999999999999999999999999999999999999999999999998 5888999999999999
Q ss_pred eEEEEecCceEEEcCCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHhhcCCeEEEEecCCchhhHHHHHHHHHHHH
Q psy14622 566 GEIVITKDDTLILKGKGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSEVEVNEKKDRVTDAL 645 (788)
Q Consensus 566 ~~V~vt~d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~~~~~~L~eRla~LsggvAvI~VGG~Te~EikErk~r~edAl 645 (788)
++|++++++++++++.+++++++.|+++|+.+++++.++|++++|+||++||+|++++|.|||+|+.+++|++++++||+
T Consensus 318 ~~v~~~~~~~~~i~~~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~eR~~~l~~~~~TI~irG~t~~~l~E~~r~i~Dal 397 (520)
T cd03344 318 KKVVVTKDDTTIIGGAGDKAAIKARIAQIRKQIEETTSDYDKEKLQERLAKLSGGVAVIKVGGATEVELKEKKDRVEDAL 397 (520)
T ss_pred eEEEEeeceEEEEeCCCCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhcCCeEEEEEecCcHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccccCCchhHhhHHHHhhhhhccCccccCCChhhHHHHHHHHHHHHHhhcChhHHHHHHHHHHHhccCeEE
Q psy14622 646 NATRAAVEEGIVPGGGTALLRCIAVLDKLETANADQATGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAV 725 (788)
Q Consensus 646 ~a~raA~e~GiVpGGG~all~as~~L~~~~~~~~~~~~G~~~~i~~r~~~l~~~~~~~~~~~d~~~l~eRla~Lsggvav 725 (788)
|++|+|+++|||||||+++++|+..|.++...+..+..|
T Consensus 398 ~~~k~a~~~g~VpGGGa~e~~~s~~L~~~~~~~~~~~~~----------------------------------------- 436 (520)
T cd03344 398 NATRAAVEEGIVPGGGVALLRASPALDKLKALNGDEKLG----------------------------------------- 436 (520)
T ss_pred HHHHHHHhcCCCcCCcHHHHHHHHHHHHhccCChHHHHH-----------------------------------------
Confidence 999999999999999999999999997654222233333
Q ss_pred EEecccHHHHHHHHhcchHHHHHHHhCCchHHHHHHHhcCCCCeeEEcCCCcccchhhcCC
Q psy14622 726 LKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVLESSGEMGYDAMNNEYVNMIQKVL 786 (788)
Q Consensus 726 i~vGa~~~e~~e~~~r~~~a~~a~~Aa~e~g~Vv~~~~~~~~~~Gyda~~~~~~dm~~~Gi 786 (788)
++...++++.+.+++|.|||++...|+.++++...++|||+.+|+++||++.||
T Consensus 437 -------~~~~a~Al~~ip~~La~NaG~d~~~vi~~l~~~~~~~G~d~~~g~~~d~~~~gV 490 (520)
T cd03344 437 -------IEIVRRALEAPLRQIAENAGVDGSVVVEKVLESPDGFGYDAATGEYVDMIEAGI 490 (520)
T ss_pred -------HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHhhcCCEeEECCCCcccchHhccC
Confidence 899999999999999999999999999999876557999999999999999997
No 13
>COG0459 GroL Chaperonin GroEL (HSP60 family) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.5e-81 Score=714.85 Aligned_cols=449 Identities=45% Similarity=0.655 Sum_probs=408.0
Q ss_pred EeeccCCCCCcCCCCceeeeecCCCCceEeeChHHhhccccccccccChhhHHHHHHhhhcccccCCCchhHHHHHHHHH
Q psy14622 6 LEQSWGSPKITKDDGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIA 85 (788)
Q Consensus 6 i~~~~~S~kiLGPkG~nkmI~~~~G~~~ITnDGvTIlk~I~l~d~~ehpgAkLl~e~A~~qd~evGDGTTTavVLA~aLL 85 (788)
+.+.++|+ |||+||||||+++.|+|.|||||+||+++|+++ ||+|||++++|++||+++||||||+||||++|+
T Consensus 23 la~~vktt--LGPkG~~k~l~~~~g~~~iTnDG~tIlkeiele----hp~akll~eva~~qd~e~GDGTTtavVLa~all 96 (524)
T COG0459 23 LADAVKTT--LGPKGRNKMLVDSGGDITITNDGVTILKEIELE----HPGAKLLVEVAKKQDDEAGDGTTTAVVLAGALL 96 (524)
T ss_pred HHHHHHhc--cCCCcCceEEecCCCCEEEecCcceehhhhhcc----CchhHHHHHHHHHHHHHhcCchHHHHHHHHHHH
Confidence 34668888 999999999999977999999999999999996 999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhcCCCCCCHH-----HHHHHHHhccCCchHHhhHHHHHHHHhhhcccc
Q psy14622 86 KEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVTTPE-----EIAQVATISANGDKAVGELISDAMKRVSAKVEF 160 (788)
Q Consensus 86 ~eglklI~~Gi~P~~I~~Gi~~A~~~ile~L~~ls~~V~d~e-----eL~~VA~tSan~d~~Ig~LIadAv~kV~~~~e~ 160 (788)
++|++++++|+||+.|++||++|.+.+++.|+++++++++.+ ...++++.++++++.||+++++||.++++
T Consensus 97 ~ea~~li~~gi~P~~I~~G~~~A~~~~~e~l~~~a~~v~~~~~~~~~~~t~v~sk~~~~~~~i~~lv~~Av~~v~~---- 172 (524)
T COG0459 97 KEAEKLIAAGIHPTVIKRGYRLAVEKAVEELKEIAKPVSDSEEELKIAITSVASKSANSDEEIGELVVEAVEKVGK---- 172 (524)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhccCCcchhhhhhhhheeeeeeccChHHHHHHHHHHHHHhcc----
Confidence 999999999999999999999999999999999999998655 66666666776678899999999998411
Q ss_pred ccceeeeccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhcccccccccccccccccCCCccc
Q psy14622 161 QDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRFGPEVR 240 (788)
Q Consensus 161 ~d~~ILite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~~~~~~~r 240 (788)
+
T Consensus 173 -----------------------------------------------------------------------------~-- 173 (524)
T COG0459 173 -----------------------------------------------------------------------------E-- 173 (524)
T ss_pred -----------------------------------------------------------------------------c--
Confidence 0
Q ss_pred cccccceeecccccccCcccccccccccccccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeeccccCCcce
Q psy14622 241 GLMLQGVDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEAL 320 (788)
Q Consensus 241 ~~~L~~~~i~~~~~~~tp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 320 (788)
.
T Consensus 174 -------------------------------------------~------------------------------------ 174 (524)
T COG0459 174 -------------------------------------------Q------------------------------------ 174 (524)
T ss_pred -------------------------------------------c------------------------------------
Confidence 0
Q ss_pred eeEeeecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccccCCCCCchhhhhhhhhHH
Q psy14622 321 STLVVGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFIIELKLVLE 400 (788)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (788)
T Consensus 175 -------------------------------------------------------------------------------- 174 (524)
T COG0459 175 -------------------------------------------------------------------------------- 174 (524)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHhhhccCCCCcEEEecCCccceeEEEEEeeEecccccccccccccCCceeEeccceeecccccccchhhhHHH
Q psy14622 401 YYIQTYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESKISSIQSIIPA 480 (788)
Q Consensus 401 ~~~~~~~~~~~kvG~dGvItveeg~~~~~~lev~eG~~fd~GylSpyfvt~~e~~~v~l~~p~ILitD~kI~~i~~IlP~ 480 (788)
--.||+++++++.+..+++++++||+||+||+||||+++ .+++||+||++|.+|+..++.+|
T Consensus 175 ------------~d~~~i~~vk~~gg~~~e~~vveG~~~dkg~~s~~~~~~-----~~~e~~~Ili~d~~l~~~k~~l~- 236 (524)
T COG0459 175 ------------SDLDGIIIVKESGGSETELEVVEGMVFDKGYLSPYFMPD-----KRLENPKILLLDKKLEIKKPELP- 236 (524)
T ss_pred ------------cccCCeEEEEecCCCccceEEEeeEEecCCccCCCCCCc-----cccccceEEEEccccccccccCc-
Confidence 011788899999999999999999999999999999988 57889999999999999999999
Q ss_pred HHHHHhcCCCeEEEecCCChhhHHhHHhhhcccccceeeecCCCCcchhhhhhhhhHhhhCCeEeccCCCCCcccccCcc
Q psy14622 481 LELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATLQDLAVATGGIVFGDEASPVKLEDLQAT 560 (788)
Q Consensus 481 Le~~~~~~rpLLIIAedi~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~~~LeDiAilTGg~vis~~~~g~~l~~v~~~ 560 (788)
++...+.++||++|++|+++++|.+++.|.+++++++|+|++|||||+|+.+|+|++|+||+++++++ .+ + .+.
T Consensus 237 ~e~~i~~~~~l~~i~e~ee~e~l~~~v~ni~~~g~~~vvv~~~gi~D~~~~~L~d~~Ilt~~~v~~~d-l~---~--~l~ 310 (524)
T COG0459 237 LEIVISSGKPLLIIAEDEEGEALATLVVNILRGGANVVVVKAPGIDDLAKAYLEDIAILTGRRVKKED-LG---E--RLA 310 (524)
T ss_pred ceeEecCccHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECCCCcHHHHHHHHhhcceecceecchh-hH---H--HHH
Confidence 89888999999999999999999999999999999999999999999999999999999999999988 33 1 778
Q ss_pred cccceeEEEEecCceEEEcCCCCHHHHHHHHHHHHHHHHhc-CChHHHHHHHHHHHhhcCCeEEEEecCCchhhHHHHHH
Q psy14622 561 DLGSVGEIVITKDDTLILKGKGKKEDIDRRADQIRDQIEAT-TSDYEREKLQERLARLASGVAVLKVGGSSEVEVNEKKD 639 (788)
Q Consensus 561 ~LG~a~~V~vt~d~Ttii~g~g~~~~I~~R~~~l~~~~~~~-~s~~~~~~L~eRla~LsggvAvI~VGG~Te~EikErk~ 639 (788)
.+|.|+.|.+.+|.|+...|.+ .+.+++.. .++|++.++++|.++ +|++++|.|||+|+.+++|+++
T Consensus 311 ~~~ga~~v~~~~d~t~~~~G~~-----------~~~~ve~~~~~~~~~~~~~~~~~~-~~~~~tI~vrgate~~ldE~er 378 (524)
T COG0459 311 KLGGAKIVSVLKDLTTIVLGEG-----------AAGLVEETKTGDYDMEKLQERKAK-AGGVATILVRGATEVELDEKER 378 (524)
T ss_pred HccCceEEeecccCceeecCcc-----------ccceEEEeeccchhhhhhhhhhhc-CCCeEEEEECCccHhHHHHHHH
Confidence 9999999999999999988876 15566666 889999999999999 9999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhc-cccCCchhHhhHHHHhhhh-hccCc-cccCCChhhHHHHHHHHHHHHHhhcChhHHHHHHHHH
Q psy14622 640 RVTDALNATRAAVEEG-IVPGGGTALLRCIAVLDKL-ETANA-DQATGKKEDIDRRADQIRDQIEATTSDYEREKLQERL 716 (788)
Q Consensus 640 r~edAl~a~raA~e~G-iVpGGG~all~as~~L~~~-~~~~~-~~~~G~~~~i~~r~~~l~~~~~~~~~~~d~~~l~eRl 716 (788)
+++||||++|+|+++| ||||||+++++++..|... .+.+. +++.|
T Consensus 379 ~i~DAL~~~~~ave~g~iV~GGGa~e~~~a~~L~~~~~~~~g~~e~~~-------------------------------- 426 (524)
T COG0459 379 RIEDALNVVRAAVEEGKIVPGGGAAEIEAALRLREYAMTVEGGDEQLG-------------------------------- 426 (524)
T ss_pred HHHHHHHHHHHHHhcCCeEeCCCHHHHHHHHHHHhhhccCCchHHHHH--------------------------------
Confidence 9999999999999999 9999999999999999865 22222 34434
Q ss_pred HHhccCeEEEEecccHHHHHHHHhcchHHHHHHHhCCchHHHHHHHhcCCC--CeeEEcCCCcc-cchhhcCC
Q psy14622 717 ARLASGVAVLKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVLESSG--EMGYDAMNNEY-VNMIQKVL 786 (788)
Q Consensus 717 a~Lsggvavi~vGa~~~e~~e~~~r~~~a~~a~~Aa~e~g~Vv~~~~~~~~--~~Gyda~~~~~-~dm~~~Gi 786 (788)
++++.+++..|.+++|.|||+|+..|+.++++... ++|||+.+++| +||++.||
T Consensus 427 ----------------i~~~a~Ale~ip~~La~NaG~d~~~v~~~L~~~~~~~~~G~d~~~~~~~~dm~~~GI 483 (524)
T COG0459 427 ----------------IEAFARALEAPPRQLAENAGLDPIEVLSKLRSAHATTNYGIDAFTGEYEDDMIEAGI 483 (524)
T ss_pred ----------------HHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhcccCCccceeccCCccccchHhccC
Confidence 89999999999999999999999999999987653 58999999999 88999997
No 14
>cd03338 TCP1_delta TCP-1 (CTT or eukaryotic type II) chaperonin family, delta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=9.8e-65 Score=578.45 Aligned_cols=430 Identities=21% Similarity=0.324 Sum_probs=364.6
Q ss_pred EeeccCCCCCcCCCCceeeeecCCCCceEeeChHHhhccccccccccChhhHHHHHHhhhcccccCCCchhHHHHHHHHH
Q psy14622 6 LEQSWGSPKITKDDGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIA 85 (788)
Q Consensus 6 i~~~~~S~kiLGPkG~nkmI~~~~G~~~ITnDGvTIlk~I~l~d~~ehpgAkLl~e~A~~qd~evGDGTTTavVLA~aLL 85 (788)
+.+.++|+ |||+||||||+++.|+++|||||+||+++|+++ ||.|+|++++|.+||+++||||||+++||++|+
T Consensus 20 i~~~v~tt--lGP~G~~k~i~~~~g~~~iTnDG~tIlk~l~~~----hp~a~ll~~~a~~q~~~~GDGTtt~vvLa~~ll 93 (515)
T cd03338 20 VADAIRTS--LGPRGMDKMIQTGKGEVIITNDGATILKQMSVL----HPAAKMLVELSKAQDIEAGDGTTSVVVLAGALL 93 (515)
T ss_pred HHHHHhCC--CCCCCCCeeeeCCCCCEEEECcHHHHHHhCcCc----CHHHHHHHHHHHHHHhHhcCCcchHHHHHHHHH
Confidence 34678899 999999999999999999999999999999998 999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhcCCCCC--CHHHHHHHHHhccCCc------hHHhhHHHHHHHHhhhc
Q psy14622 86 KEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVT--TPEEIAQVATISANGD------KAVGELISDAMKRVSAK 157 (788)
Q Consensus 86 ~eglklI~~Gi~P~~I~~Gi~~A~~~ile~L~~ls~~V~--d~eeL~~VA~tSan~d------~~Ig~LIadAv~kV~~~ 157 (788)
+++++++++|+||..|++||++|.+.++++|++++.+++ +.++|.+||++|+++| +.+|+++++|+.++++.
T Consensus 94 ~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~a~~v~~~~~~~l~~va~ts~~sK~~~~~~~~ls~li~~A~~~v~~~ 173 (515)
T cd03338 94 SACESLLKKGIHPTVISESFQIAAKKAVEILDSMSIPVDLNDRESLIKSATTSLNSKVVSQYSSLLAPIAVDAVLKVIDP 173 (515)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHhccccchhhHHHHHHHHHHHHHHhhcc
Confidence 999999999999999999999999999999999999986 7889999999999965 67999999999984210
Q ss_pred cccccceeeeccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhcccccccccccccccccCCC
Q psy14622 158 VEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRFGP 237 (788)
Q Consensus 158 ~e~~d~~ILite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~~~~~ 237 (788)
+.
T Consensus 174 ------------------------------------------------------------------------------~~ 175 (515)
T cd03338 174 ------------------------------------------------------------------------------AT 175 (515)
T ss_pred ------------------------------------------------------------------------------cc
Confidence 00
Q ss_pred ccccccccceeecccccccCcccccccccccccccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeeccccCC
Q psy14622 238 EVRGLMLQGVDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDG 317 (788)
Q Consensus 238 ~~r~~~L~~~~i~~~~~~~tp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 317 (788)
+ ...+++.+
T Consensus 176 ~-~~~d~~~i---------------------------------------------------------------------- 184 (515)
T cd03338 176 A-TNVDLKDI---------------------------------------------------------------------- 184 (515)
T ss_pred c-CcCCHHHe----------------------------------------------------------------------
Confidence 0 00000000
Q ss_pred cceeeEeeecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccccCCCCCchhhhhhhh
Q psy14622 318 EALSTLVVGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFIIELKL 397 (788)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (788)
T Consensus 185 -------------------------------------------------------------------------------- 184 (515)
T cd03338 185 -------------------------------------------------------------------------------- 184 (515)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHHHHHHHHHhhhccCCCCcEEEecCCccceeEEEEEeeEeccccccc----ccccccCC---------ceeEecccee
Q psy14622 398 VLEYYIQTYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISP----YFINTAKG---------AKVEFQDALV 464 (788)
Q Consensus 398 ~~~~~~~~~~~~~~kvG~dGvItveeg~~~~~~lev~eG~~fd~GylSp----yfvt~~e~---------~~v~l~~p~I 464 (788)
.|....|.+..++ ++++|+.|++||.+| +|+++++- .+.++.+++
T Consensus 185 --------------------~i~~~~Ggs~~ds-~lv~Giv~~k~~~~~~~~p~~i~n~ki~ll~~~le~~~~~~~~~~- 242 (515)
T cd03338 185 --------------------RIVKKLGGTIEDT-ELVDGLVFTQKASKKAGGPTRIEKAKIGLIQFCLSPPKTDMDNNI- 242 (515)
T ss_pred --------------------EEEEecCCChhhc-eeeeeEEEeccccCcCCCCccccCCcEEEEeccccccccccCceE-
Confidence 1233356677776 899999999999995 48888776 445667777
Q ss_pred ecccc-cccch-----hhhHHHHHHHHhcCCCeEEEecCCChhhHHhHHhhhcccccceeeecCCCCcchhhhhhhhhHh
Q psy14622 465 LLSES-KISSI-----QSIIPALELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATLQDLAV 538 (788)
Q Consensus 465 LitD~-kI~~i-----~~IlP~Le~~~~~~rpLLIIAedi~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~~~LeDiAi 538 (788)
++++. ++.++ +++.++++.+.+.+.||||++++|++++++.++.|.+++ .+++||+ ..++..|+|||.
T Consensus 243 ~i~~~~~~~~~~~~E~~~i~~~v~~i~~~g~~lvi~~~~i~~~~v~~l~~~~l~~-~~I~av~-----~~~~~~LerIa~ 316 (515)
T cd03338 243 VVNDYAQMDRILREERKYILNMCKKIKKSGCNVLLIQKSILRDAVSDLALHFLAK-LKIMVVK-----DIEREEIEFICK 316 (515)
T ss_pred EeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCcccccccHHHHHHHHH-CCceEEe-----cCCHHHHHHHHH
Confidence 55664 66666 789999999999999999999999999999999999996 9999998 457889999999
Q ss_pred hhCCeEeccCCCCCcccccCcccccceeEEEEecC---ceEEEcCCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHH
Q psy14622 539 ATGGIVFGDEASPVKLEDLQATDLGSVGEIVITKD---DTLILKGKGKKEDIDRRADQIRDQIEATTSDYEREKLQERLA 615 (788)
Q Consensus 539 lTGg~vis~~~~g~~l~~v~~~~LG~a~~V~vt~d---~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~~~~~~L~eRla 615 (788)
+|||++++ ++++++.++||+|++|.+.+. +++++.+..+
T Consensus 317 ~tGa~ii~------sl~~l~~~~LG~~~~v~~~~~g~~~~~~i~~~~~-------------------------------- 358 (515)
T cd03338 317 TIGCKPVA------SIDHFTEDKLGSADLVEEVSLGDGKIVKITGVKN-------------------------------- 358 (515)
T ss_pred HHCCEEec------ccccCCHhhCCCCceEEEEEECCeEEEEEEecCC--------------------------------
Confidence 99999998 356777889999999987664 3344443211
Q ss_pred hhcCCeEEEEecCCchhhHHHHHHHHHHHHHHHHHHHHhc-cccCCchhHhhHHHHhhhhhc-cCccccCCChhhHHHHH
Q psy14622 616 RLASGVAVLKVGGSSEVEVNEKKDRVTDALNATRAAVEEG-IVPGGGTALLRCIAVLDKLET-ANADQATGKKEDIDRRA 693 (788)
Q Consensus 616 ~LsggvAvI~VGG~Te~EikErk~r~edAl~a~raA~e~G-iVpGGG~all~as~~L~~~~~-~~~~~~~G~~~~i~~r~ 693 (788)
++++++|.+||+|+.+++|++.+++||+||+|+|+++| +|||||+++++++..|+.+.. .+.+++.|
T Consensus 359 --~~~~~TIllrG~t~~~l~e~~r~i~Dal~~~~~~~~~~~vvpGGG~~e~~ls~~l~~~~~~~~~~~~~~--------- 427 (515)
T cd03338 359 --PGKTVTILVRGSNKLVLDEAERSLHDALCVIRCLVKKRALIPGGGAPEIEIALQLSEWARTLTGVEQYC--------- 427 (515)
T ss_pred --CCceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhCCCEEECCCHHHHHHHHHHHHHhccCCcHHHHH---------
Confidence 57899999999999999999999999999999999999 999999999999999876532 12122222
Q ss_pred HHHHHHHHhhcChhHHHHHHHHHHHhccCeEEEEecccHHHHHHHHhcchHHHHHHHhCCchHHHHHHHhc----CCCCe
Q psy14622 694 DQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVLE----SSGEM 769 (788)
Q Consensus 694 ~~l~~~~~~~~~~~d~~~l~eRla~Lsggvavi~vGa~~~e~~e~~~r~~~a~~a~~Aa~e~g~Vv~~~~~----~~~~~ 769 (788)
++...++++.+.+++|.|||+++..|+.++.+ ....+
T Consensus 428 ---------------------------------------~~~~a~al~~ip~~L~~NaG~d~~~~~~~l~~~h~~~~~~~ 468 (515)
T cd03338 428 ---------------------------------------VRAFADALEVIPYTLAENAGLNPISIVTELRNRHAQGEKNA 468 (515)
T ss_pred ---------------------------------------HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccCCcc
Confidence 89999999999999999999999999999975 23468
Q ss_pred eEEcCCCcccchhhcCC
Q psy14622 770 GYDAMNNEYVNMIQKVL 786 (788)
Q Consensus 770 Gyda~~~~~~dm~~~Gi 786 (788)
|||+.+|+|+||++.||
T Consensus 469 G~d~~~g~~~d~~~~gI 485 (515)
T cd03338 469 GINVRKGAITNILEENV 485 (515)
T ss_pred ceeccCCCccchhhcCc
Confidence 99999999999999997
No 15
>cd03342 TCP1_zeta TCP-1 (CTT or eukaryotic type II) chaperonin family, zeta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=1.7e-64 Score=572.93 Aligned_cols=410 Identities=21% Similarity=0.342 Sum_probs=350.9
Q ss_pred EeeccCCCCCcCCCCceeeeecCCCCceEeeChHHhhccccccccccChhhHHHHHHhhhcccccCCCchhHHHHHHHHH
Q psy14622 6 LEQSWGSPKITKDDGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIA 85 (788)
Q Consensus 6 i~~~~~S~kiLGPkG~nkmI~~~~G~~~ITnDGvTIlk~I~l~d~~ehpgAkLl~e~A~~qd~evGDGTTTavVLA~aLL 85 (788)
+.+.++|+ |||+||||||+++.|+++|||||+||+++|+++ ||.++|+.++|.+||+++||||||++|||++|+
T Consensus 24 l~~~vktt--lGP~G~~kmi~~~~g~~~iTnDG~tIlk~i~~~----hP~a~l~~~~a~~qd~~~GDGTTt~vvLa~~Ll 97 (484)
T cd03342 24 LQDVLKTN--LGPKGTLKMLVSGAGDIKLTKDGNVLLSEMQIQ----HPTASMIARAATAQDDITGDGTTSNVLLIGELL 97 (484)
T ss_pred HHHHHhcC--cCCCCCceEEECCCCCEEEeccHHHHHHhccCc----CHHHHHHHHHHHHhhhHhCCChhhHHHHHHHHH
Confidence 45678899 999999999999999999999999999999998 999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhcCCCCC---CHHHHHHHHHhccCCc------hHHhhHHHHHHHHhhh
Q psy14622 86 KEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVT---TPEEIAQVATISANGD------KAVGELISDAMKRVSA 156 (788)
Q Consensus 86 ~eglklI~~Gi~P~~I~~Gi~~A~~~ile~L~~ls~~V~---d~eeL~~VA~tSan~d------~~Ig~LIadAv~kV~~ 156 (788)
+++++++++|+||+.|++||++|.+.+++.|++++++++ +.+.+.+||++|+++| +.|++++++|+..+++
T Consensus 98 ~~a~~li~~gi~P~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~~~~l~~va~ts~~sk~~~~~~~~l~~l~~~A~~~v~~ 177 (484)
T cd03342 98 KQAERYIQEGVHPRIITEGFELAKNKALKFLESFKVPVEIDTDRELLLSVARTSLRTKLHADLADQLTEIVVDAVLAIYK 177 (484)
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHhCcccchhHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999987 8889999999999997 7899999999998411
Q ss_pred ccccccceeeeccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhcccccccccccccccccCC
Q psy14622 157 KVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRFG 236 (788)
Q Consensus 157 ~~e~~d~~ILite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~~~~ 236 (788)
+-
T Consensus 178 ~~------------------------------------------------------------------------------ 179 (484)
T cd03342 178 PD------------------------------------------------------------------------------ 179 (484)
T ss_pred cC------------------------------------------------------------------------------
Confidence 00
Q ss_pred CccccccccceeecccccccCcccccccccccccccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeeccccC
Q psy14622 237 PEVRGLMLQGVDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVD 316 (788)
Q Consensus 237 ~~~r~~~L~~~~i~~~~~~~tp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 316 (788)
....++.+.
T Consensus 180 ---~~~~~~~I~-------------------------------------------------------------------- 188 (484)
T cd03342 180 ---EPIDLHMVE-------------------------------------------------------------------- 188 (484)
T ss_pred ---CccChhHeE--------------------------------------------------------------------
Confidence 000001110
Q ss_pred CcceeeEeeecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccccCCCCCchhhhhhh
Q psy14622 317 GEALSTLVVGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFIIELK 396 (788)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (788)
T Consensus 189 -------------------------------------------------------------------------------- 188 (484)
T cd03342 189 -------------------------------------------------------------------------------- 188 (484)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhHHHHHHHHHHhhhccCCCCcEEEecCCccceeEEEEEeeEecccccccccccccCCceeEeccceeecccccccchhh
Q psy14622 397 LVLEYYIQTYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESKISSIQS 476 (788)
Q Consensus 397 ~~~~~~~~~~~~~~~kvG~dGvItveeg~~~~~~lev~eG~~fd~GylSpyfvt~~e~~~v~l~~p~ILitD~kI~~i~~ 476 (788)
++.+..| ..++.++++|+.|++||.+||| ...++||+|+++|.+|+..+.
T Consensus 189 ---------------------i~ki~gg--s~~ds~~i~G~~~~~~~~~~~m-------~~~~~n~~Ill~~~~le~~~~ 238 (484)
T cd03342 189 ---------------------IMQMQHK--SDSDTKLIRGLVLDHGARHPDM-------PKRVENAYILTCNVSLEYEKT 238 (484)
T ss_pred ---------------------EEEecCC--ChhhceEEeeEEEecCCCCCCC-------CccccCceEEEEeCCCCCCcc
Confidence 1122222 2346789999999999999998 234689999999999987765
Q ss_pred -hHHHHHHHHhcCCCeEEEecCCChhhHHhHHhhhcccccceeeecCCCCcchhhhhhhhhHhhhCCeEeccCCCCCccc
Q psy14622 477 -IIPALELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATLQDLAVATGGIVFGDEASPVKLE 555 (788)
Q Consensus 477 -IlP~Le~~~~~~rpLLIIAedi~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~~~LeDiAilTGg~vis~~~~g~~l~ 555 (788)
+.+.+ ..||||++++|+++||..|..|+ ++|||.. ++..|+|||.+|||++++ +++
T Consensus 239 ~~~~~~------~~~lvi~~~~I~~~al~~l~~~~------I~av~~~-----~~~~l~~ia~~tGa~ii~------~l~ 295 (484)
T cd03342 239 EVNSGF------FYSVVINQKGIDPPSLDMLAKEG------ILALRRA-----KRRNMERLTLACGGVAMN------SVD 295 (484)
T ss_pred ccCcEE------EEEEEEeCCCccHHHHHHHHHCC------CeEEEeC-----CHHHHHHHHHHhCCEEec------ccc
Confidence 32221 24799999999999999999984 7899863 677899999999999998 357
Q ss_pred ccCcccccceeEE---EEecCceEEEcCCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHhhcCCeEEEEecCCchh
Q psy14622 556 DLQATDLGSVGEI---VITKDDTLILKGKGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSEV 632 (788)
Q Consensus 556 ~v~~~~LG~a~~V---~vt~d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~~~~~~L~eRla~LsggvAvI~VGG~Te~ 632 (788)
+++.++||+|++| .++.+++++++|.+++ ++++|.++|+|+.
T Consensus 296 ~~~~~~LG~~~~v~~~~ig~~~~~~i~~~~~~-----------------------------------~~~tI~lrg~t~~ 340 (484)
T cd03342 296 DLSPECLGYAGLVYERTLGEEKYTFIEGVKNP-----------------------------------KSCTILIKGPNDH 340 (484)
T ss_pred cCChhhCcccceEEEEEECCeEEEEEECCCCC-----------------------------------cEEEEEEeCCCHH
Confidence 7888999999999 7888999999887654 5799999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhc-cccCCchhHhhHHHHhhhhhc-cCccccCCChhhHHHHHHHHHHHHHhhcChhHHH
Q psy14622 633 EVNEKKDRVTDALNATRAAVEEG-IVPGGGTALLRCIAVLDKLET-ANADQATGKKEDIDRRADQIRDQIEATTSDYERE 710 (788)
Q Consensus 633 EikErk~r~edAl~a~raA~e~G-iVpGGG~all~as~~L~~~~~-~~~~~~~G~~~~i~~r~~~l~~~~~~~~~~~d~~ 710 (788)
+++|.+.+++||++++|+|+++| +|||||+++++++..|+++.. .+.+++.|
T Consensus 341 ~l~E~er~l~DAl~~vk~~~~~~~~vpGGGa~e~~ls~~L~~~~~~~~~~~~~~-------------------------- 394 (484)
T cd03342 341 TITQIKDAIRDGLRAVKNAIEDKCVVPGAGAFEVALYAHLKEFKKSVKGKAKLG-------------------------- 394 (484)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCcEEeCCCHHHHHHHHHHHHHhhcCCCHHHHH--------------------------
Confidence 99999999999999999999999 999999999999999976532 12222222
Q ss_pred HHHHHHHHhccCeEEEEecccHHHHHHHHhcchHHHHHHHhCCchHHHHHHHhcC----CCCeeEEcCCCcccchhhcCC
Q psy14622 711 KLQERLARLASGVAVLKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVLES----SGEMGYDAMNNEYVNMIQKVL 786 (788)
Q Consensus 711 ~l~eRla~Lsggvavi~vGa~~~e~~e~~~r~~~a~~a~~Aa~e~g~Vv~~~~~~----~~~~Gyda~~~~~~dm~~~Gi 786 (788)
++...++++.+.+++|.|||+++..|+.+++.. ...+|||+.+|+|+||++.||
T Consensus 395 ----------------------i~~~a~Al~~ip~~La~NaG~d~~~~l~~l~~~h~~~~~~~Gid~~~g~~~d~~~~gI 452 (484)
T cd03342 395 ----------------------VQAFADALLVIPKTLAENSGLDVQETLVKLQDEYAEGGQVGGVDLDTGEPMDPESEGI 452 (484)
T ss_pred ----------------------HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHccCCceeeeCCCCcccchhhcCc
Confidence 899999999999999999999999999999732 346899999999999999997
No 16
>cd03343 cpn60 cpn60 chaperonin family. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. Archaeal cpn60 (thermosome), together with TF55 from thermophilic bacteria and the eukaryotic cytosol chaperonin (CTT), belong to the type II group of chaperonins. Cpn60 consists of two stacked octameric rings, which are composed of one or two different subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis.
Probab=100.00 E-value=3.4e-63 Score=565.93 Aligned_cols=417 Identities=26% Similarity=0.382 Sum_probs=354.5
Q ss_pred EeeccCCCCCcCCCCceeeeecCCCCceEeeChHHhhccccccccccChhhHHHHHHhhhcccccCCCchhHHHHHHHHH
Q psy14622 6 LEQSWGSPKITKDDGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIA 85 (788)
Q Consensus 6 i~~~~~S~kiLGPkG~nkmI~~~~G~~~ITnDGvTIlk~I~l~d~~ehpgAkLl~e~A~~qd~evGDGTTTavVLA~aLL 85 (788)
+.+.++|+ |||+||||||+++.|+++|||||+||+++|+++ ||+|+|++++|.+||+++||||||+++||++|+
T Consensus 27 i~~~v~ts--lGP~G~~k~i~~~~g~~~iTnDG~tIlk~l~~~----hP~a~ll~~~a~~q~~~~GDGTtt~viLa~~ll 100 (517)
T cd03343 27 VAEAVRTT--LGPKGMDKMLVDSLGDVTITNDGATILKEMDIE----HPAAKMLVEVAKTQDEEVGDGTTTAVVLAGELL 100 (517)
T ss_pred HHHHHhCC--CCCCCCCceeEcCCCCEEEEccHHHHHHHccCc----CHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHH
Confidence 34568888 999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhcCCCCC--CHHHHHHHHHhccCCc------hHHhhHHHHHHHHhhhc
Q psy14622 86 KEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVT--TPEEIAQVATISANGD------KAVGELISDAMKRVSAK 157 (788)
Q Consensus 86 ~eglklI~~Gi~P~~I~~Gi~~A~~~ile~L~~ls~~V~--d~eeL~~VA~tSan~d------~~Ig~LIadAv~kV~~~ 157 (788)
+++++++++|+||+.|++||++|.+.+++.|++++++++ +.+.+.+||++|+++| +.|++++++|+.++++.
T Consensus 101 ~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~s~~v~~~~~~~l~~va~ts~~sk~~~~~~~~l~~l~~~A~~~v~~~ 180 (517)
T cd03343 101 EKAEDLLDQNIHPTVIIEGYRLAAEKALELLDEIAIKVDPDDKDTLRKIAKTSLTGKGAEAAKDKLADLVVDAVLQVAEK 180 (517)
T ss_pred HHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHHhhhc
Confidence 999999999999999999999999999999999999986 7889999999999987 78999999999983110
Q ss_pred cccccceeeeccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhcccccccccccccccccCCC
Q psy14622 158 VEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRFGP 237 (788)
Q Consensus 158 ~e~~d~~ILite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~~~~~ 237 (788)
+.
T Consensus 181 ------------------------------------------------------------------------------~~ 182 (517)
T cd03343 181 ------------------------------------------------------------------------------RD 182 (517)
T ss_pred ------------------------------------------------------------------------------cC
Confidence 00
Q ss_pred ccccccccceeecccccccCcccccccccccccccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeeccccCC
Q psy14622 238 EVRGLMLQGVDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDG 317 (788)
Q Consensus 238 ~~r~~~L~~~~i~~~~~~~tp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 317 (788)
.....+++
T Consensus 183 ~~~~~~~~------------------------------------------------------------------------ 190 (517)
T cd03343 183 GKYVVDLD------------------------------------------------------------------------ 190 (517)
T ss_pred CCccccHH------------------------------------------------------------------------
Confidence 00000000
Q ss_pred cceeeEeeecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccccCCCCCchhhhhhhh
Q psy14622 318 EALSTLVVGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFIIELKL 397 (788)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (788)
T Consensus 191 -------------------------------------------------------------------------------- 190 (517)
T cd03343 191 -------------------------------------------------------------------------------- 190 (517)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHHHHHHHHHhhhccCCCCcEEE--ecCCccceeEEEEEeeEecccccccccccccCCceeEeccceeeccccc-----
Q psy14622 398 VLEYYIQTYIYLCLKVGKEGVITV--KDGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESK----- 470 (788)
Q Consensus 398 ~~~~~~~~~~~~~~kvG~dGvItv--eeg~~~~~~lev~eG~~fd~GylSpyfvt~~e~~~v~l~~p~ILitD~k----- 470 (788)
.|.+ ..|.+.. +.++++|+.|++||.+|||. ..++||+|+++|.+
T Consensus 191 --------------------~I~i~k~~Ggs~~-ds~lv~G~v~~~~~~~~~m~-------~~~~n~~Illl~~~Le~~k 242 (517)
T cd03343 191 --------------------NIKIEKKTGGSVD-DTELIRGIVIDKEVVHPGMP-------KRVENAKIALLDAPLEVKK 242 (517)
T ss_pred --------------------HeeEEeecCcCHH-HcceeeeEEEeccCCCCCCc-------cccCCCcEEEEeccccCCc
Confidence 0112 2344444 67789999999999999983 35789999999999
Q ss_pred --------ccchhhhHHHHH-----------HHHhcCCCeEEEecCCChhhHHhHHhhhcccccceeeecCCCCcchhhh
Q psy14622 471 --------ISSIQSIIPALE-----------LANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKA 531 (788)
Q Consensus 471 --------I~~i~~IlP~Le-----------~~~~~~rpLLIIAedi~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~~ 531 (788)
+++.+++.|+++ .+.+.+.||||++++|+++||..|..+ |.+ +|+. .++.
T Consensus 243 ~~~~~~~~i~s~~~~~~~~~~E~~~i~~~v~~i~~~g~~lvi~~~~I~~~al~~l~~~---gI~---~v~~-----v~~~ 311 (517)
T cd03343 243 TEIDAKIRITSPDQLQAFLEQEEAMLKEMVDKIADTGANVVFCQKGIDDLAQHYLAKA---GIL---AVRR-----VKKS 311 (517)
T ss_pred cccceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCccHHHHHHHhHC---CcE---EEEe-----CCHH
Confidence 588889999877 777889999999999999999999743 433 5553 2688
Q ss_pred hhhhhHhhhCCeEeccCCCCCcccccCcccccceeEEEEe---cCceEEEcCCCCHHHHHHHHHHHHHHHHhcCChHHHH
Q psy14622 532 TLQDLAVATGGIVFGDEASPVKLEDLQATDLGSVGEIVIT---KDDTLILKGKGKKEDIDRRADQIRDQIEATTSDYERE 608 (788)
Q Consensus 532 ~LeDiAilTGg~vis~~~~g~~l~~v~~~~LG~a~~V~vt---~d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~~~~~ 608 (788)
.|+|||.+|||++++ ++++++.+.||+|++|.+. ++++++++|.+++.
T Consensus 312 ~l~~Ia~~tGa~ii~------~~~~l~~~~LG~~~~v~~~~ig~~~~~~~~~~~~~~----------------------- 362 (517)
T cd03343 312 DMEKLARATGAKIVT------NIDDLTPEDLGEAELVEERKVGDDKMVFVEGCKNPK----------------------- 362 (517)
T ss_pred HHHHHHHHhCCEEec------chhhCChhhCCccceEEEEEECCeEEEEEEcCCCCc-----------------------
Confidence 899999999999997 3577788899999999877 77889998866543
Q ss_pred HHHHHHHhhcCCeEEEEecCCchhhHHHHHHHHHHHHHHHHHHHHhc-cccCCchhHhhHHHHhhhhhc-cCccccCCCh
Q psy14622 609 KLQERLARLASGVAVLKVGGSSEVEVNEKKDRVTDALNATRAAVEEG-IVPGGGTALLRCIAVLDKLET-ANADQATGKK 686 (788)
Q Consensus 609 ~L~eRla~LsggvAvI~VGG~Te~EikErk~r~edAl~a~raA~e~G-iVpGGG~all~as~~L~~~~~-~~~~~~~G~~ 686 (788)
.++|.++|+|+.+++|++.+++||++++|+|+++| +|||||+++++++..|..+.. .+.++..|
T Consensus 363 ------------~~TI~lrG~t~~~l~e~~~~l~Dal~~~~~~~~~~~vvpGGG~~e~~ls~~L~~~~~~~~~~~~~~-- 428 (517)
T cd03343 363 ------------AVTILLRGGTEHVVDELERALEDALRVVADALEDGKVVAGGGAVEIELAKRLREYARSVGGREQLA-- 428 (517)
T ss_pred ------------eEEEEEECCcHHHHHHHHHHHHHHHHHHHHHHhCCCeeeCCCHHHHHHHHHHHHHHhcCCCHHHHH--
Confidence 25899999999999999999999999999999999 999999999999999876422 12122222
Q ss_pred hhHHHHHHHHHHHHHhhcChhHHHHHHHHHHHhccCeEEEEecccHHHHHHHHhcchHHHHHHHhCCchHHHHHHHhc--
Q psy14622 687 EDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVLE-- 764 (788)
Q Consensus 687 ~~i~~r~~~l~~~~~~~~~~~d~~~l~eRla~Lsggvavi~vGa~~~e~~e~~~r~~~a~~a~~Aa~e~g~Vv~~~~~-- 764 (788)
++...++++.+.+++|.|||+++..|+.+++.
T Consensus 429 ----------------------------------------------~~~~~~aL~~ip~~L~~NaG~d~~~~~~~l~~~h 462 (517)
T cd03343 429 ----------------------------------------------VEAFADALEEIPRTLAENAGLDPIDTLVELRAAH 462 (517)
T ss_pred ----------------------------------------------HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHH
Confidence 78999999999999999999999999999973
Q ss_pred --CCCCeeEEcCCCcccchhhcCC
Q psy14622 765 --SSGEMGYDAMNNEYVNMIQKVL 786 (788)
Q Consensus 765 --~~~~~Gyda~~~~~~dm~~~Gi 786 (788)
...++|||+.+|+|+||++.||
T Consensus 463 ~~~~~~~G~d~~~g~~~d~~~~gI 486 (517)
T cd03343 463 EKGNKNAGLDVYTGEVVDMLEKGV 486 (517)
T ss_pred HccCCceeeecCCCCccchhhcCc
Confidence 2346899999999999999997
No 17
>TIGR02345 chap_CCT_eta T-complex protein 1, eta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT eta chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=1.2e-64 Score=578.96 Aligned_cols=419 Identities=24% Similarity=0.344 Sum_probs=356.9
Q ss_pred EeeccCCCCCcCCCCceeeeecCCCCceEeeChHHhhccccccccccChhhHHHHHHhhhcccccCCCchhHHHHHHHHH
Q psy14622 6 LEQSWGSPKITKDDGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIA 85 (788)
Q Consensus 6 i~~~~~S~kiLGPkG~nkmI~~~~G~~~ITnDGvTIlk~I~l~d~~ehpgAkLl~e~A~~qd~evGDGTTTavVLA~aLL 85 (788)
+.+.++|+ |||+||||||+++.| ++|||||+||+++|+++ ||.|+|++++|.+||+++||||||+++||++|+
T Consensus 30 i~~~v~tt--lGP~G~~k~i~~~~g-~~iTnDG~TIlk~i~~~----hP~a~ll~~~a~~q~~~~GDGTTt~vvLa~~Ll 102 (522)
T TIGR02345 30 IAEILKTT--LGPRGMDKLIVGKNG-ATVSNDGATILKLLDIV----HPAAKTLVDIAKSQDSEVGDGTTSVVILAGELL 102 (522)
T ss_pred HHHHHhCC--CCCCCCceEEECCCC-cEEeCcHHHHHHHhccc----ChHHHHHHHHHHHHHHHhCCCchhHHHHHHHHH
Confidence 34678899 999999999999999 99999999999999998 999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhcCCCCC-----CHHHHHHHHHhccCC------chHHhhHHHHHHHHh
Q psy14622 86 KEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVT-----TPEEIAQVATISANG------DKAVGELISDAMKRV 154 (788)
Q Consensus 86 ~eglklI~~Gi~P~~I~~Gi~~A~~~ile~L~~ls~~V~-----d~eeL~~VA~tSan~------d~~Ig~LIadAv~kV 154 (788)
+++++++++|+||..|++||+.|.+.++++|+++++|++ +.+.+.++|++|+++ ++.|++++++|+.++
T Consensus 103 ~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~va~tsl~sK~~~~~~~~l~~l~~~A~~~v 182 (522)
T TIGR02345 103 KEAKPFIEEGVHPQLIIRCYREALMLAIEKLKEIAVTIDEVKGEQREVLEKCAATALNSKLIAHEKEFFSKMIVDAVLQL 182 (522)
T ss_pred HhHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccCcCCcccccHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999987 557899999999985 478999999999983
Q ss_pred hhccccccceeeeccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhccccccccccccccccc
Q psy14622 155 SAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVR 234 (788)
Q Consensus 155 ~~~~e~~d~~ILite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~~ 234 (788)
+++ ++|
T Consensus 183 ~~~----------------------------------------~~~---------------------------------- 188 (522)
T TIGR02345 183 DID----------------------------------------DLD---------------------------------- 188 (522)
T ss_pred hhc----------------------------------------cCC----------------------------------
Confidence 110 000
Q ss_pred CCCccccccccceeecccccccCcccccccccccccccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeeccc
Q psy14622 235 FGPEVRGLMLQGVDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAED 314 (788)
Q Consensus 235 ~~~~~r~~~L~~~~i~~~~~~~tp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (788)
++.
T Consensus 189 ---------~~~-------------------------------------------------------------------- 191 (522)
T TIGR02345 189 ---------LKL-------------------------------------------------------------------- 191 (522)
T ss_pred ---------hhH--------------------------------------------------------------------
Confidence 000
Q ss_pred cCCcceeeEeeecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccccCCCCCchhhhh
Q psy14622 315 VDGEALSTLVVGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFIIE 394 (788)
Q Consensus 315 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (788)
T Consensus 192 -------------------------------------------------------------------------------- 191 (522)
T TIGR02345 192 -------------------------------------------------------------------------------- 191 (522)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhHHHHHHHHHHhhhccCCCCcEEEecCCccceeEEEEEeeEecccccccccccccCCceeEeccceeecccccccch
Q psy14622 395 LKLVLEYYIQTYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESKISSI 474 (788)
Q Consensus 395 ~~~~~~~~~~~~~~~~~kvG~dGvItveeg~~~~~~lev~eG~~fd~GylSpyfvt~~e~~~v~l~~p~ILitD~kI~~i 474 (788)
+ +++.+ +|.+..++. +++|+.|++||.||||.+.+. .++||+||++|.+|+..
T Consensus 192 ------------------I---~i~ki-~Ggs~~ds~-~v~Giv~~~~~~~~~~~~~~~----~~~n~kIll~~~~Le~~ 244 (522)
T TIGR02345 192 ------------------I---GVKKV-QGGSLQDSV-LVNGVAFKKTFSYAGFEQQPK----KFANPKILLLNVELELK 244 (522)
T ss_pred ------------------h---eEEee-cCCCHHhcc-eecceEEecccCccccccCCc----eeccceEEEEecCcccC
Confidence 0 23334 455555554 589999999999999987764 58899999999997532
Q ss_pred hhhHHHHHHHHhcCCCeEEEecCCCh-----hhHHhHHhhhccccc----ceeeecCCCCcchhhhhhhhhHhhhCCeEe
Q psy14622 475 QSIIPALELANSKRKPLVILAEDVDG-----EALSTLVVNRLKIGL----QVAAVKAPGFGDNRKATLQDLAVATGGIVF 545 (788)
Q Consensus 475 ~~IlP~Le~~~~~~rpLLIIAedi~~-----eAL~~Lv~N~~rg~~----~v~AVkaP~fG~~R~~~LeDiAilTGg~vi 545 (788)
+.+.|+.|++++++. +++..++.|+.++.. ++|+++.| |++++..+|+|.+|++++++.
T Consensus 245 -----------~~~~~~~i~~~~~~~~~~~~~~e~~~i~~~i~~i~~~g~~vv~~~~~-i~d~~~~~L~~~~I~~~~~v~ 312 (522)
T TIGR02345 245 -----------AEKDNAEIRVEDVEDYQAIVDAEWAIIFRKLEKIVESGANVVLSKLP-IGDLATQYFADHNIFCAGRVS 312 (522)
T ss_pred -----------ccccceEEEECCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCCC-ccHHHHHHHHHCCcEEEecCC
Confidence 555699999999999 999999999999854 99999999 999999999999999999887
Q ss_pred ccCCCCC-----------cccccCcccccceeEEEEecCceEEEcCCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHH
Q psy14622 546 GDEASPV-----------KLEDLQATDLGSVGEIVITKDDTLILKGKGKKEDIDRRADQIRDQIEATTSDYEREKLQERL 614 (788)
Q Consensus 546 s~~~~g~-----------~l~~v~~~~LG~a~~V~vt~d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~~~~~~L~eRl 614 (788)
..+ .+. ++++++.++||+|+.+.. ++...+|+
T Consensus 313 ~~d-l~ria~~tga~ii~~~~~l~~~~LG~~~~ie~------------------------------------~~~~~~r~ 355 (522)
T TIGR02345 313 DED-LKRVVKACGGSIQSTTSDLEADVLGTCALFEE------------------------------------RQIGSERY 355 (522)
T ss_pred HHH-HHHHHHHhCCeEEcchhhCChhhccCCceEEE------------------------------------EEECCeEE
Confidence 765 333 557788889999998742 12234567
Q ss_pred HhhcCC----eEEEEecCCchhhHHHHHHHHHHHHHHHHHHHHh-ccccCCchhHhhHHHHhhhhhc-cCccccCCChhh
Q psy14622 615 ARLASG----VAVLKVGGSSEVEVNEKKDRVTDALNATRAAVEE-GIVPGGGTALLRCIAVLDKLET-ANADQATGKKED 688 (788)
Q Consensus 615 a~Lsgg----vAvI~VGG~Te~EikErk~r~edAl~a~raA~e~-GiVpGGG~all~as~~L~~~~~-~~~~~~~G~~~~ 688 (788)
.+|+|+ +++|.+||+|+.+++|++++++||++++|+|+++ |+|||||+++++++..|.+... .+.++..|
T Consensus 356 ~~~~g~~~~~~~TI~lrG~t~~~l~E~~r~i~DAl~~~~~~~~~~~vvpGGG~~e~~ls~~l~~~~~~~~~~~~~~---- 431 (522)
T TIGR02345 356 NYFTGCPHAKTCTIILRGGAEQFIEEAERSLHDAIMIVRRALKARKIVAGGGAIEMELSKILREHSKKIDGKQQLI---- 431 (522)
T ss_pred EEEEcCCCCceEEEEEECCCHHHHHHHHHHHHHHHHHHHHHhcCCCEEeCCCHHHHHHHHHHHHHHhhCCCHHHHH----
Confidence 777777 8999999999999999999999999999999998 8999999999999999875421 12222222
Q ss_pred HHHHHHHHHHHHHhhcChhHHHHHHHHHHHhccCeEEEEecccHHHHHHHHhcchHHHHHHHhCCchHHHHHHHhc----
Q psy14622 689 IDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVLE---- 764 (788)
Q Consensus 689 i~~r~~~l~~~~~~~~~~~d~~~l~eRla~Lsggvavi~vGa~~~e~~e~~~r~~~a~~a~~Aa~e~g~Vv~~~~~---- 764 (788)
++...++++.+.+++|.|||+++..|+.++.+
T Consensus 432 --------------------------------------------i~~~a~aL~~ip~~La~NaG~d~~~vl~~l~~~h~~ 467 (522)
T TIGR02345 432 --------------------------------------------IEAFAKALEIIPRSLCENAGFDSIEILNKLRSRHAK 467 (522)
T ss_pred --------------------------------------------HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHc
Confidence 89999999999999999999999999999975
Q ss_pred CCCCeeEEcCCCcccchhhcCC
Q psy14622 765 SSGEMGYDAMNNEYVNMIQKVL 786 (788)
Q Consensus 765 ~~~~~Gyda~~~~~~dm~~~Gi 786 (788)
....+|||+.+|+|+||+++||
T Consensus 468 ~~~~~G~d~~~~~i~d~~~~gI 489 (522)
T TIGR02345 468 GGKWYGVDINTEDIGDNFENFV 489 (522)
T ss_pred CCCccceeCCCCcccchhhcCc
Confidence 2346899999999999999997
No 18
>TIGR02346 chap_CCT_theta T-complex protein 1, theta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT alpha chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=9.2e-63 Score=564.35 Aligned_cols=424 Identities=21% Similarity=0.293 Sum_probs=357.2
Q ss_pred EeeccCCCCCcCCCCceeeeecCCCCceEeeChHHhhccccccccccChhhHHHHHHhhhcccccCCCchhHHHHHHHHH
Q psy14622 6 LEQSWGSPKITKDDGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIA 85 (788)
Q Consensus 6 i~~~~~S~kiLGPkG~nkmI~~~~G~~~ITnDGvTIlk~I~l~d~~ehpgAkLl~e~A~~qd~evGDGTTTavVLA~aLL 85 (788)
+.+.++|+ |||+||||||+++.|+++|||||+||+++|+++ ||.|+|++++|.+||+++||||||++|||++|+
T Consensus 30 l~~~vktt--lGP~G~~kmi~~~~g~~~ITnDG~tIlk~i~~~----hP~akll~e~a~sqd~~~GDGTTt~vvLa~~Ll 103 (531)
T TIGR02346 30 LSNITRTS--LGPNGMNKMVINHLDKLFVTNDAATILRELEVQ----HPAAKLLVMASEMQENEIGDGTNLVIVLAGELL 103 (531)
T ss_pred HHHHHhcc--cCCCcCCeEEEcCCCCEEEECcHHHHHHhcccc----CHHHHHHHHHHHHHhhhhCCChhhHHHHHHHHH
Confidence 34568889 999999999999999999999999999999998 999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhcCC-CCC---CHHHHHHHHHhccCC-----chHHhhHHHHHHHHhhh
Q psy14622 86 KEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSK-PVT---TPEEIAQVATISANG-----DKAVGELISDAMKRVSA 156 (788)
Q Consensus 86 ~eglklI~~Gi~P~~I~~Gi~~A~~~ile~L~~ls~-~V~---d~eeL~~VA~tSan~-----d~~Ig~LIadAv~kV~~ 156 (788)
+++++++++|+||..|++||+.|.+.+++.|++++. ++. +.+.+.++|++|+++ ++.|++++++|+.++++
T Consensus 104 ~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~l~~i~~tsl~sK~~~~~~~ls~l~~~Ai~~v~~ 183 (531)
T TIGR02346 104 DKAEELIRMGLHPSEIIKGYEQALKKAMEVLEELVVWEVEDVRNKKELIKALKASISSKQYGNEDFLAQLVAKACSTVMP 183 (531)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCHHHHHHHHHHHhccccCchHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999986 664 477899999988865 67899999999998421
Q ss_pred ccccccceeeeccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhcccccccccccccccccCC
Q psy14622 157 KVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRFG 236 (788)
Q Consensus 157 ~~e~~d~~ILite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~~~~ 236 (788)
. +
T Consensus 184 ~------------------------------------------------------------------------------~ 185 (531)
T TIGR02346 184 K------------------------------------------------------------------------------N 185 (531)
T ss_pred c------------------------------------------------------------------------------C
Confidence 0 0
Q ss_pred CccccccccceeecccccccCcccccccccccccccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeeccccC
Q psy14622 237 PEVRGLMLQGVDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVD 316 (788)
Q Consensus 237 ~~~r~~~L~~~~i~~~~~~~tp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 316 (788)
. ....++.+.+
T Consensus 186 ~--~~~~~~~I~i------------------------------------------------------------------- 196 (531)
T TIGR02346 186 P--ENFNVDNIRV------------------------------------------------------------------- 196 (531)
T ss_pred C--CcCChhHeeE-------------------------------------------------------------------
Confidence 0 0000000100
Q ss_pred CcceeeEeeecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccccCCCCCchhhhhhh
Q psy14622 317 GEALSTLVVGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFIIELK 396 (788)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (788)
T Consensus 197 -------------------------------------------------------------------------------- 196 (531)
T TIGR02346 197 -------------------------------------------------------------------------------- 196 (531)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhHHHHHHHHHHhhhccCCCCcEEEecCCccceeEEEEEeeEeccc---------------ccccccccccC-CceeEec
Q psy14622 397 LVLEYYIQTYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRG---------------YISPYFINTAK-GAKVEFQ 460 (788)
Q Consensus 397 ~~~~~~~~~~~~~~~kvG~dGvItveeg~~~~~~lev~eG~~fd~G---------------ylSpyfvt~~e-~~~v~l~ 460 (788)
+. -.|.+.+ +.++++|+.|++| |.+|||+++++ ++.+.+.
T Consensus 197 ----------------------~k-i~G~s~~-ds~li~Gi~~~~~~~~~~k~i~n~kI~l~~~~l~~~~~~~~~~~~~~ 252 (531)
T TIGR02346 197 ----------------------SK-IMGGSIS-NSEVLKGMVFNREAEGSVKRVKNAKVAVFSCPLDTATTETKGTVLIH 252 (531)
T ss_pred ----------------------EE-ecCCChh-hceeEeeeEEeccCCCCceeccCCCEEEEecCcCCCcccCceEEEEC
Confidence 01 1233444 6789999999999 99999999988 8999999
Q ss_pred cceeecccccccchhhhHHHHHHHHhcCCCeEEEecCCChhhHHhHHhhhcccccceeeecCCCCcchhhhhhhhhHhhh
Q psy14622 461 DALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATLQDLAVAT 540 (788)
Q Consensus 461 ~p~ILitD~kI~~i~~IlP~Le~~~~~~rpLLIIAedi~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~~~LeDiAilT 540 (788)
+|+.+....+.+ .+.+.|.++.+.+.+.||||..++|++.++..|. ..+++|||.|+++ .|+|||.+|
T Consensus 253 ~~~~l~~~~~~e-~~~i~~~l~~i~~~g~~lvi~~~~I~d~~~~~l~------~~~I~av~~~~~~-----~l~~Ia~~t 320 (531)
T TIGR02346 253 NAEELLNYSKGE-ENQIEAYIKAIADSGVNVIVTGGSVGDMALHYCE------KYNIMVLKIPSKF-----ELRRLCKTV 320 (531)
T ss_pred CHHHHHHHHHHH-HHHHHHHHHHHHHcCCcEEEECCCcCHHHHHHHH------HCCcEEEecCCHH-----HHHHHHHHH
Confidence 999999777655 6889999999999999999889999998888665 4678999999877 478999999
Q ss_pred CCeEeccCCCCCcccccCcccccceeEEEEec---CceEEEcCCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHhh
Q psy14622 541 GGIVFGDEASPVKLEDLQATDLGSVGEIVITK---DDTLILKGKGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARL 617 (788)
Q Consensus 541 Gg~vis~~~~g~~l~~v~~~~LG~a~~V~vt~---d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~~~~~~L~eRla~L 617 (788)
||++++. ++++++++||+|++|.+.+ ++++++.+. +.
T Consensus 321 Ga~ii~~------l~~~~~~~LG~a~~v~~~~ig~~~~~~i~~~----------------------------------~~ 360 (531)
T TIGR02346 321 GATPLAR------LGAPQPEEIGYVDSVYVSEIGGQKVTVFKQE----------------------------------NG 360 (531)
T ss_pred CCEEecc------cccCCHhHccccceEEEEEECCEEEEEEEcc----------------------------------CC
Confidence 9999963 5778889999999998765 334444431 11
Q ss_pred cCCeEEEEecCCchhhHHHHHHHHHHHHHHHHHHHHhc-cccCCchhHhhHHHHhhhhhc-cCccccCCChhhHHHHHHH
Q psy14622 618 ASGVAVLKVGGSSEVEVNEKKDRVTDALNATRAAVEEG-IVPGGGTALLRCIAVLDKLET-ANADQATGKKEDIDRRADQ 695 (788)
Q Consensus 618 sggvAvI~VGG~Te~EikErk~r~edAl~a~raA~e~G-iVpGGG~all~as~~L~~~~~-~~~~~~~G~~~~i~~r~~~ 695 (788)
.+++++|.+||+|+.+++|++++++|||+++|+|+++| ||||||+++++++..|..+.. .+.++..|
T Consensus 361 ~~~~~tI~lrG~t~~~l~E~er~i~DAl~~~k~ai~~~~vVpGGG~~e~~ls~~L~~~~~~~~~~~~~~----------- 429 (531)
T TIGR02346 361 DSKISTIILRGSTKNLLDDIERAIDDGVNVIKALVKDNRFLPGAGATEIELALRLKKYANKLPGLDQYA----------- 429 (531)
T ss_pred CCCeEEEEEECCCHHHHHHHHHHHHHHHHHHHHHhcCCCEEECcCHHHHHHHHHHHHHhccCCCHHHHH-----------
Confidence 48899999999999999999999999999999999999 999999999999999876421 11122222
Q ss_pred HHHHHHhhcChhHHHHHHHHHHHhccCeEEEEecccHHHHHHHHhcchHHHHHHHhCCchHHHHHHHhc----CCCCeeE
Q psy14622 696 IRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVLE----SSGEMGY 771 (788)
Q Consensus 696 l~~~~~~~~~~~d~~~l~eRla~Lsggvavi~vGa~~~e~~e~~~r~~~a~~a~~Aa~e~g~Vv~~~~~----~~~~~Gy 771 (788)
++...++++.+..++|.|||+++-.|+.+++. ....+||
T Consensus 430 -------------------------------------~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~h~~~~~~~Gi 472 (531)
T TIGR02346 430 -------------------------------------IKKFAEAFEIIPRTLAENAGLNPNEVIPKLYAAHKKGNTSSGI 472 (531)
T ss_pred -------------------------------------HHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHccCCccce
Confidence 78999999999999999999999999999864 2346899
Q ss_pred EcCCCcc--cchhhcCC
Q psy14622 772 DAMNNEY--VNMIQKVL 786 (788)
Q Consensus 772 da~~~~~--~dm~~~Gi 786 (788)
|+.+++| +||++.||
T Consensus 473 d~~~~~~~i~d~~~~gI 489 (531)
T TIGR02346 473 DIEAESDGVKDASEAGI 489 (531)
T ss_pred eeeCCCccccChhhcCc
Confidence 9999995 99999997
No 19
>TIGR02340 chap_CCT_alpha T-complex protein 1, alpha subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT alpha chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=3e-62 Score=560.67 Aligned_cols=423 Identities=22% Similarity=0.295 Sum_probs=352.7
Q ss_pred EeeccCCCCCcCCCCceeeeecCCCCceEeeChHHhhccccccccccChhhHHHHHHhhhcccccCCCchhHHHHHHHHH
Q psy14622 6 LEQSWGSPKITKDDGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIA 85 (788)
Q Consensus 6 i~~~~~S~kiLGPkG~nkmI~~~~G~~~ITnDGvTIlk~I~l~d~~ehpgAkLl~e~A~~qd~evGDGTTTavVLA~aLL 85 (788)
+.+.++|+ |||+||||||+++.|+++|||||+||+++|+++ ||.|+|++++|++||+++||||||++|||++|+
T Consensus 24 l~~~vktt--lGP~G~~k~I~~~~g~~~iTnDG~tIlk~i~~~----hP~akll~~~a~~qd~~~GDGTTt~viLa~~Ll 97 (536)
T TIGR02340 24 IANIVKTS--LGPVGLDKMLVDDIGDVTITNDGATILKLLEVE----HPAAKILVELAQLQDREVGDGTTSVVIIAAELL 97 (536)
T ss_pred HHHHHhcC--cCCCcCceEEEcCCCCEEEeccHHHHHHHhccc----ChHHHHHHHHHHHHHHHhCCChhhHHHHHHHHH
Confidence 34568888 999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhc-CCCCC--CHHHHHHHHHhccCC------chHHhhHHHHHHHHhhh
Q psy14622 86 KEGFEKISKGANPIEIRRGVMLAVETIKTHLKEL-SKPVT--TPEEIAQVATISANG------DKAVGELISDAMKRVSA 156 (788)
Q Consensus 86 ~eglklI~~Gi~P~~I~~Gi~~A~~~ile~L~~l-s~~V~--d~eeL~~VA~tSan~------d~~Ig~LIadAv~kV~~ 156 (788)
+++++++++|+||+.|++||+.|.+.+++.|+++ ++|++ +.+++.+||++|+++ ++.|++++++|+..++.
T Consensus 98 ~~a~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~~~~~l~~va~tsl~sK~~~~~~~~ls~l~~~A~~~v~~ 177 (536)
T TIGR02340 98 KRADELIKRKVHPTSIISGYRLACKEAVKYIKENLSVSVDELGREALINVAKTSMSSKIIGLDSDFFSNIVVDAVLAVKM 177 (536)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhccCCCcccHHHHHHHHHHHhccccchhhHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999974 88887 788999999999985 47899999999998310
Q ss_pred ccccccceeeeccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhcccccccccccccccccCC
Q psy14622 157 KVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRFG 236 (788)
Q Consensus 157 ~~e~~d~~ILite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~~~~ 236 (788)
++
T Consensus 178 ------------------------------------------------------------------------------~~ 179 (536)
T TIGR02340 178 ------------------------------------------------------------------------------TN 179 (536)
T ss_pred ------------------------------------------------------------------------------cc
Confidence 00
Q ss_pred CccccccccceeecccccccCcccccccccccccccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeeccccC
Q psy14622 237 PEVRGLMLQGVDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVD 316 (788)
Q Consensus 237 ~~~r~~~L~~~~i~~~~~~~tp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 316 (788)
T Consensus 180 -------------------------------------------------------------------------------- 179 (536)
T TIGR02340 180 -------------------------------------------------------------------------------- 179 (536)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcceeeEeeecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccccCCCCCchhhhhhh
Q psy14622 317 GEALSTLVVGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFIIELK 396 (788)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (788)
.+|.+++
T Consensus 180 -----------------------------------------~~g~~~~-------------------------------- 186 (536)
T TIGR02340 180 -----------------------------------------ENGETKY-------------------------------- 186 (536)
T ss_pred -----------------------------------------ccCcccc--------------------------------
Confidence 0000000
Q ss_pred hhHHHHHHHHHHhhhccCCCCcEEEecCCccceeEEEEEeeEecccccccccccccCCceeEeccceeecccccccchh-
Q psy14622 397 LVLEYYIQTYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESKISSIQ- 475 (788)
Q Consensus 397 ~~~~~~~~~~~~~~~kvG~dGvItveeg~~~~~~lev~eG~~fd~GylSpyfvt~~e~~~v~l~~p~ILitD~kI~~i~- 475 (788)
+.+ +=.|.-..|.+. ++.++++|+.|++||.|| +|...++||+|+++|.+|+..+
T Consensus 187 -~~~---------------~I~i~k~~G~s~-~~s~~i~Gi~i~~~~~~~-------~m~~~~~n~kIli~~~~L~~~~~ 242 (536)
T TIGR02340 187 -PIK---------------AVNILKAHGGSA-RESYLVKGYALNCTRASQ-------QMPKRIKKAKIACLDFNLQKQKM 242 (536)
T ss_pred -chH---------------HeEEEEecCCCc-cccEEEEEEEEecccCCC-------CCcceecCCcEEEEecCCCCCcc
Confidence 000 000111345455 678999999999999987 5666899999999999997654
Q ss_pred ----------------------h-hHHHHHHHHhcCCCeEEEecCCChhhHHhHHhhhcccccceeeecCCCCcchh--h
Q psy14622 476 ----------------------S-IIPALELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNR--K 530 (788)
Q Consensus 476 ----------------------~-IlP~Le~~~~~~rpLLIIAedi~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R--~ 530 (788)
+ +.+.++.+.+.+..|+|..++|++.|+..|+.+ |.++.+| +
T Consensus 243 ~~~~~~~~~~~~~le~~~~~E~~~i~~~i~~I~~~g~~lvi~~k~I~~~a~~~L~k~-------------~I~~i~rv~~ 309 (536)
T TIGR02340 243 ALGVQIVVDDPAKLEGIRQREADITKERIKKILKAGANVVLTTGGIDDMCLKYFVEA-------------GAMGVRRCKK 309 (536)
T ss_pred cCceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEeCCCCcHHHHHHHHHC-------------CcEEEecCCH
Confidence 2 235666666778888888889999999998866 4555556 8
Q ss_pred hhhhhhHhhhCCeEeccCCCCC-cccccCcccccceeEEE---EecCceEEEcCCCCHHHHHHHHHHHHHHHHhcCChHH
Q psy14622 531 ATLQDLAVATGGIVFGDEASPV-KLEDLQATDLGSVGEIV---ITKDDTLILKGKGKKEDIDRRADQIRDQIEATTSDYE 606 (788)
Q Consensus 531 ~~LeDiAilTGg~vis~~~~g~-~l~~v~~~~LG~a~~V~---vt~d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~~~ 606 (788)
..|+|||.+|||++++.. .+. ..++++.++||+|++|. ++++++++++|.+++
T Consensus 310 ~~LerIa~~tGa~ii~~~-~~l~~~~~~~~~~LG~~~~v~~~~ig~~~~~~i~~~~~~---------------------- 366 (536)
T TIGR02340 310 EDLKRIAKATGGTLVSTL-ADLEGEETFDASYLGFADEVVEERIADDECILIKGTKGR---------------------- 366 (536)
T ss_pred HHHHHHHHHhCCEEecch-hhcCccccccccccccCceEEEEEECCeEEEEEEcCCCC----------------------
Confidence 889999999999999876 233 44667788999999998 889999999876654
Q ss_pred HHHHHHHHHhhcCCeEEEEecCCchhhHHHHHHHHHHHHHHHHHHHHhc-cccCCchhHhhHHHHhhhhhc-cCccccCC
Q psy14622 607 REKLQERLARLASGVAVLKVGGSSEVEVNEKKDRVTDALNATRAAVEEG-IVPGGGTALLRCIAVLDKLET-ANADQATG 684 (788)
Q Consensus 607 ~~~L~eRla~LsggvAvI~VGG~Te~EikErk~r~edAl~a~raA~e~G-iVpGGG~all~as~~L~~~~~-~~~~~~~G 684 (788)
.+++|.|||+|+.+++|++.+++||++++|+|+++| ||||||+++++++..|+++.. .+.++..|
T Consensus 367 -------------~~~TIlirG~t~~~l~E~~r~i~DAl~~~~~~~~~~~vVpGGGa~e~~ls~~l~~~~~~~~~~~~~~ 433 (536)
T TIGR02340 367 -------------KSASIILRGANDFMLDEMERSLHDALCVVKRTLESNSVVPGGGAVETALSIYLENFATTLGSREQLA 433 (536)
T ss_pred -------------CEEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhcCCCEEECCCHHHHHHHHHHHHHhhhCCChhHHH
Confidence 279999999999999999999999999999999999 999999999999999875422 12222222
Q ss_pred ChhhHHHHHHHHHHHHHhhcChhHHHHHHHHHHHhccCeEEEEecccHHHHHHHHhcchHHHHHHHhCCchHHHHHHHhc
Q psy14622 685 KKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVLE 764 (788)
Q Consensus 685 ~~~~i~~r~~~l~~~~~~~~~~~d~~~l~eRla~Lsggvavi~vGa~~~e~~e~~~r~~~a~~a~~Aa~e~g~Vv~~~~~ 764 (788)
++...++++.+.+++|.|||+++..|+.++.+
T Consensus 434 ------------------------------------------------~~~fa~AL~~ip~~La~NaG~d~~~~l~~l~~ 465 (536)
T TIGR02340 434 ------------------------------------------------IAEFAEALLIIPKVLAVNAALDSTELVAKLRA 465 (536)
T ss_pred ------------------------------------------------HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 89999999999999999999999999999864
Q ss_pred C------------CCCeeEEcCCCcccchhhcCC
Q psy14622 765 S------------SGEMGYDAMNNEYVNMIQKVL 786 (788)
Q Consensus 765 ~------------~~~~Gyda~~~~~~dm~~~Gi 786 (788)
. ...+|||+.+|+|+||++.||
T Consensus 466 ~h~~~~~~~~~~~~~~~Gid~~~g~~~d~~~~gI 499 (536)
T TIGR02340 466 YHAAAQLKPEKKHLKWYGLDLSNGKIRDNKEAGV 499 (536)
T ss_pred HHHccCcccccccCceEeEEccCCccccchhccc
Confidence 1 235899999999999999997
No 20
>TIGR02342 chap_CCT_delta T-complex protein 1, delta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT delta chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=2.2e-62 Score=559.58 Aligned_cols=431 Identities=22% Similarity=0.345 Sum_probs=361.2
Q ss_pred EeeccCCCCCcCCCCceeeeecCCCCceEeeChHHhhccccccccccChhhHHHHHHhhhcccccCCCchhHHHHHHHHH
Q psy14622 6 LEQSWGSPKITKDDGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIA 85 (788)
Q Consensus 6 i~~~~~S~kiLGPkG~nkmI~~~~G~~~ITnDGvTIlk~I~l~d~~ehpgAkLl~e~A~~qd~evGDGTTTavVLA~aLL 85 (788)
+.+.++|+ |||+||||||+++.|+++|||||+||+++|+++ ||.|+|++++|++||+++||||||+++||++|+
T Consensus 21 ia~~~ktt--lGP~G~~kmi~~~~g~~~ITnDG~tIlk~i~~~----hP~akll~~~a~~qd~~~GDGTtt~viLa~~Ll 94 (517)
T TIGR02342 21 VADAIRTS--LGPRGMDKMIQSGNGEVIITNDGATILKQMGVI----HPAAKMLVELSKAQDIEAGDGTTSVVILAGALL 94 (517)
T ss_pred HHHHHhCC--cCCCCCcEEEEcCCCCEEEeCCHHHHHHhcccc----ChHHHHHHHHHHHHHHHhCCCcchHHHHHHHHH
Confidence 35678899 999999999999999999999999999999998 999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhcCCCCC--CHHHHHHHHHhccCCc------hHHhhHHHHHHHHhhhc
Q psy14622 86 KEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVT--TPEEIAQVATISANGD------KAVGELISDAMKRVSAK 157 (788)
Q Consensus 86 ~eglklI~~Gi~P~~I~~Gi~~A~~~ile~L~~ls~~V~--d~eeL~~VA~tSan~d------~~Ig~LIadAv~kV~~~ 157 (788)
+++++++++|+||+.|++||++|.+.+++.|+++++|++ +.+.+.++|++|++++ +.|++++++|+..+++.
T Consensus 95 ~~a~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~l~~va~tsl~sK~~~~~~~~ls~l~~~a~~~v~~~ 174 (517)
T TIGR02342 95 GACETLLERGIHPTTISESFQIAADEAIKILDEMSIPVDLSDREILIKSATTSLSSKVVSQYSSLLAPLAVDAVLKVIDP 174 (517)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccccCccCHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999999986 7889999999999875 46799999999873110
Q ss_pred cccccceeeeccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhcccccccccccccccccCCC
Q psy14622 158 VEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRFGP 237 (788)
Q Consensus 158 ~e~~d~~ILite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~~~~~ 237 (788)
+
T Consensus 175 -------------------------------------------------------------------------------~ 175 (517)
T TIGR02342 175 -------------------------------------------------------------------------------E 175 (517)
T ss_pred -------------------------------------------------------------------------------c
Confidence 0
Q ss_pred ccccccccceeecccccccCcccccccccccccccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeeccccCC
Q psy14622 238 EVRGLMLQGVDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDG 317 (788)
Q Consensus 238 ~~r~~~L~~~~i~~~~~~~tp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 317 (788)
......++++.+
T Consensus 176 ~~~~~~~~~i~i-------------------------------------------------------------------- 187 (517)
T TIGR02342 176 NDKNVDLNDIKV-------------------------------------------------------------------- 187 (517)
T ss_pred cCCccCHHHeeE--------------------------------------------------------------------
Confidence 000000011101
Q ss_pred cceeeEeeecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccccCCCCCchhhhhhhh
Q psy14622 318 EALSTLVVGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFIIELKL 397 (788)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (788)
T Consensus 188 -------------------------------------------------------------------------------- 187 (517)
T TIGR02342 188 -------------------------------------------------------------------------------- 187 (517)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHHHHHHHHHhhhccCCCCcEEEecCCccceeEEEEEeeEecccccc----cccccccC---------CceeEecccee
Q psy14622 398 VLEYYIQTYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYIS----PYFINTAK---------GAKVEFQDALV 464 (788)
Q Consensus 398 ~~~~~~~~~~~~~~kvG~dGvItveeg~~~~~~lev~eG~~fd~GylS----pyfvt~~e---------~~~v~l~~p~I 464 (788)
+.+ .| +..++.++++|+.|++||.+ |+++++++ ..+.++.++++
T Consensus 188 ---------------------~k~-~G-gs~~ds~li~Givl~k~~~~~~~mpk~i~n~kI~ll~~~Le~~~~~~~~~~~ 244 (517)
T TIGR02342 188 ---------------------VKK-LG-GTIDDTELIEGLVFTQKASRSAGGPTRIEKAKIGLIQFQISPPKTDMENQVI 244 (517)
T ss_pred ---------------------Eec-cC-CChhhcEEEeeEEEeccccccCCCCccccCCcEEEEecCCCCCcccccceEE
Confidence 000 12 23346789999999999998 88887775 55667788888
Q ss_pred ecc----cccccc-hhhhHHHHHHHHhcCCCeEEEecCCChhhHHhHHhhhcccccceeeecCCCCcchhhhhhhhhHhh
Q psy14622 465 LLS----ESKISS-IQSIIPALELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATLQDLAVA 539 (788)
Q Consensus 465 Lit----D~kI~~-i~~IlP~Le~~~~~~rpLLIIAedi~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~~~LeDiAil 539 (788)
+.+ +..+.. .+.+.++++.+.+.+.||||++++|++++++.++.|.+++ .+++||| ..++..|+|||.+
T Consensus 245 ~~~~~~~~~~~~~E~~~l~~~v~~i~~~g~~lvi~~~~I~~~~l~~l~~~~l~~-~~I~av~-----~v~~~~LerIa~~ 318 (517)
T TIGR02342 245 VNDYAQMDRVLKEERKYILNIVKKIKKTGCNVLLIQKSILRDAVNDLALHFLAK-MKIMVVK-----DIEREEVEFICKT 318 (517)
T ss_pred eCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCcccccccHHHHHHHhh-CCceEEe-----cCCHHHHHHHHHH
Confidence 866 344444 4689999999999999999999999999999999999988 9999998 3478899999999
Q ss_pred hCCeEeccCCCCCcccccCcccccceeEEE-EecCceEE--EcCCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHh
Q psy14622 540 TGGIVFGDEASPVKLEDLQATDLGSVGEIV-ITKDDTLI--LKGKGKKEDIDRRADQIRDQIEATTSDYEREKLQERLAR 616 (788)
Q Consensus 540 TGg~vis~~~~g~~l~~v~~~~LG~a~~V~-vt~d~Tti--i~g~g~~~~I~~R~~~l~~~~~~~~s~~~~~~L~eRla~ 616 (788)
|||++++. +++++.++||+|++|. ++.+++.+ +.+..+
T Consensus 319 tGa~ii~~------~~~l~~~~LG~~~~v~~~~~~~~~~~~i~~~~~--------------------------------- 359 (517)
T TIGR02342 319 IGCKPIAS------IDHFTADKLGSAELVEEVTTDGGKIIKITGIQN--------------------------------- 359 (517)
T ss_pred HCCEEEcc------hhhcCcccCcCCceEEEEEECCeEEEEEEccCC---------------------------------
Confidence 99999983 5677788999999998 66655544 333211
Q ss_pred hcCCeEEEEecCCchhhHHHHHHHHHHHHHHHHHHHHh-ccccCCchhHhhHHHHhhhhhc-cCccccCCChhhHHHHHH
Q psy14622 617 LASGVAVLKVGGSSEVEVNEKKDRVTDALNATRAAVEE-GIVPGGGTALLRCIAVLDKLET-ANADQATGKKEDIDRRAD 694 (788)
Q Consensus 617 LsggvAvI~VGG~Te~EikErk~r~edAl~a~raA~e~-GiVpGGG~all~as~~L~~~~~-~~~~~~~G~~~~i~~r~~ 694 (788)
+|++++|.++|+|+.+++|++++++||++++|+|+++ |+|||||+++++++..|+++.. .+..++.|
T Consensus 360 -~~~~~tIllrG~t~~~l~E~er~i~DAl~~v~~~~~~~~~VpGGGa~e~~ls~~l~~~~~~~~~~~~~~---------- 428 (517)
T TIGR02342 360 -AGKTVTVLLRGSNKLVIDEAERSLHDALCVIRSLVKKRGLIPGGGAPEIEIAIKLSKLARTMKGVESYC---------- 428 (517)
T ss_pred -CCceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhCCCEEECcCHHHHHHHHHHHHHHhcCCcHHHHH----------
Confidence 5789999999999999999999999999999999998 8999999999999999876522 12122222
Q ss_pred HHHHHHHhhcChhHHHHHHHHHHHhccCeEEEEecccHHHHHHHHhcchHHHHHHHhCCchHHHHHHHhc----CCCCee
Q psy14622 695 QIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVLE----SSGEMG 770 (788)
Q Consensus 695 ~l~~~~~~~~~~~d~~~l~eRla~Lsggvavi~vGa~~~e~~e~~~r~~~a~~a~~Aa~e~g~Vv~~~~~----~~~~~G 770 (788)
++...++++.+.+++|.|||+++..|+.+++. ....+|
T Consensus 429 --------------------------------------i~~~a~al~~ip~~La~NaG~d~~~~l~~l~~~h~~~~~~~G 470 (517)
T TIGR02342 429 --------------------------------------VRAFADALEVIPYTLAENAGLNPIDVVTELRNRHANGEKYAG 470 (517)
T ss_pred --------------------------------------HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHcCCCccc
Confidence 88999999999999999999999999999975 234689
Q ss_pred EEcCCCcccchhhcCC
Q psy14622 771 YDAMNNEYVNMIQKVL 786 (788)
Q Consensus 771 yda~~~~~~dm~~~Gi 786 (788)
||+.+|+++||++.||
T Consensus 471 id~~~g~i~d~~~~gI 486 (517)
T TIGR02342 471 ISVRKGGITDMLEEEV 486 (517)
T ss_pred eecCCCCccchhhccc
Confidence 9999999999999997
No 21
>cd03339 TCP1_epsilon TCP-1 (CTT or eukaryotic type II) chaperonin family, epsilon subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=1.1e-62 Score=563.15 Aligned_cols=429 Identities=24% Similarity=0.371 Sum_probs=350.1
Q ss_pred EeeccCCCCCcCCCCceeeeecCCCCceEeeChHHhhccccccccccChhhHHHHHHhhhcccccCCCchhHHHHHHHHH
Q psy14622 6 LEQSWGSPKITKDDGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIA 85 (788)
Q Consensus 6 i~~~~~S~kiLGPkG~nkmI~~~~G~~~ITnDGvTIlk~I~l~d~~ehpgAkLl~e~A~~qd~evGDGTTTavVLA~aLL 85 (788)
|.+.++|+ |||+||||||+++.|+++|||||+||+++|+++ ||.|+|++++|++||+++||||||+++||++|+
T Consensus 35 i~~~v~ts--lGP~G~~kmi~~~~G~~~iTnDG~tIlk~l~~~----hP~akll~~~a~~q~~~~GDGTtt~viLa~~ll 108 (526)
T cd03339 35 VANILRTS--LGPRGMDKILVSPDGEVTVTNDGATILEKMDVD----HQIAKLLVELSKSQDDEIGDGTTGVVVLAGALL 108 (526)
T ss_pred HHHHHhCC--CCCCCCcEEEECCCCCEEEeCcHHHHHHHhccc----CHHHHHHHHHHHhhhhhhcCChhhHHHHHHHHH
Confidence 34668899 999999999999999999999999999999998 999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhcCCCCC----CHHHHHHHHHhccCCchHHhhHHHHHHHHhhhccccc
Q psy14622 86 KEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVT----TPEEIAQVATISANGDKAVGELISDAMKRVSAKVEFQ 161 (788)
Q Consensus 86 ~eglklI~~Gi~P~~I~~Gi~~A~~~ile~L~~ls~~V~----d~eeL~~VA~tSan~d~~Ig~LIadAv~kV~~~~e~~ 161 (788)
+++.+++++|+||..|++||+.|.+.+++.|+++++|+. +.+.+.++|++|++++ +++..++++.++.-+
T Consensus 109 ~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~l~~ia~tsl~sk--~~~~~~~~~s~i~v~---- 182 (526)
T cd03339 109 EQAEKLLDRGIHPIRIADGYEQACKIAVEHLEEIADKIEFSPDNKEPLIQTAMTSLGSK--IVSRCHRQFAEIAVD---- 182 (526)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccccCCCcccHHHHHHHHHHhhccc--chhhHHHHHHHHHHH----
Confidence 999999999999999999999999999999999999985 5788999999999864 444444444442000
Q ss_pred cceeeeccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhcccccccccccccccccCCCcccc
Q psy14622 162 DALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRFGPEVRG 241 (788)
Q Consensus 162 d~~ILite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~~~~~~~r~ 241 (788)
+++. +..+.. ..
T Consensus 183 ----------------------------------------------------av~~---------------i~~~~~-~~ 194 (526)
T cd03339 183 ----------------------------------------------------AVLS---------------VADLER-KD 194 (526)
T ss_pred ----------------------------------------------------HHHH---------------HhhcCC-Cc
Confidence 0000 000000 00
Q ss_pred ccccceeecccccccCcccccccccccccccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeeccccCCccee
Q psy14622 242 LMLQGVDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALS 321 (788)
Q Consensus 242 ~~L~~~~i~~~~~~~tp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 321 (788)
-+++.+.+
T Consensus 195 ~d~~~I~i------------------------------------------------------------------------ 202 (526)
T cd03339 195 VNFELIKV------------------------------------------------------------------------ 202 (526)
T ss_pred cchHHeEE------------------------------------------------------------------------
Confidence 00000100
Q ss_pred eEeeecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccccCCCCCchhhhhhhhhHHH
Q psy14622 322 TLVVGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFIIELKLVLEY 401 (788)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (788)
T Consensus 203 -------------------------------------------------------------------------------- 202 (526)
T cd03339 203 -------------------------------------------------------------------------------- 202 (526)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhhhccCCCCcEEEecCCccceeEEEEEeeEecccccccccccccCC-----ceeEeccceeeccccc--ccch
Q psy14622 402 YIQTYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFINTAKG-----AKVEFQDALVLLSESK--ISSI 474 (788)
Q Consensus 402 ~~~~~~~~~~kvG~dGvItveeg~~~~~~lev~eG~~fd~GylSpyfvt~~e~-----~~v~l~~p~ILitD~k--I~~i 474 (788)
+. -.|.... +.++++|+.|++||.+|||.++.++ ..+.|+.|++ .++.+ ++++
T Consensus 203 -----------------~k-i~Ggs~~-dS~~v~Givi~~~~~~~~m~~~~~n~kI~ll~~~le~~~~-~~~~~~~i~s~ 262 (526)
T cd03339 203 -----------------EG-KVGGRLE-DTKLVKGIVIDKDFSHPQMPKEVKDAKIAILTCPFEPPKP-KTKHKLDITSV 262 (526)
T ss_pred -----------------EE-ecCcCHH-HcceeeeEEEecccCCCCCCceecCCCEEEEEecccCCcc-ccceEEEeCCH
Confidence 00 1122222 4568899999999999999998888 7788899988 57777 7777
Q ss_pred hh-----------hHHHHHHHHhcCCCeEEEecCCChhhHHhHHhhhcccccceeeecCCCCcchhhhhhhhhHhhhCCe
Q psy14622 475 QS-----------IIPALELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATLQDLAVATGGI 543 (788)
Q Consensus 475 ~~-----------IlP~Le~~~~~~rpLLIIAedi~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~~~LeDiAilTGg~ 543 (788)
++ +.++++.+.+.+.||+|++++|++.||..|..|++. |||.+ +. ..|+|||.+|||+
T Consensus 263 ~~~~~~~~~E~~~i~~~v~~i~~~g~~lvi~~~~I~~~al~~L~~~~I~------av~~v--~~---~~LerIa~~tGa~ 331 (526)
T cd03339 263 EDYKKLQEYEQKYFREMVEQVKDAGANLVICQWGFDDEANHLLLQNGLP------AVRWV--GG---VEIELIAIATGGR 331 (526)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEeCCCCCHHHHHHHHHCCCE------EEEeC--CH---HHHHHHHHHhCCE
Confidence 66 888999999999999999999999999999988664 77774 32 3399999999999
Q ss_pred EeccCCCCCcccccCcccccceeEEE-----EecCceEEEcCCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHhhc
Q psy14622 544 VFGDEASPVKLEDLQATDLGSVGEIV-----ITKDDTLILKGKGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLA 618 (788)
Q Consensus 544 vis~~~~g~~l~~v~~~~LG~a~~V~-----vt~d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~~~~~~L~eRla~Ls 618 (788)
+++ ++++++.+.||+|++|. .+++.+++++|.+++
T Consensus 332 ii~------~l~~l~~~~LG~~~~v~~~~ig~~~~~~~~i~g~~~~---------------------------------- 371 (526)
T cd03339 332 IVP------RFEDLSPEKLGKAGLVREISFGTTKDKMLVIEGCPNS---------------------------------- 371 (526)
T ss_pred Eec------chhhCChhhcccCceEEEEEecCCCcEEEEEECCCCC----------------------------------
Confidence 997 45778888999999997 335678888876553
Q ss_pred CCeEEEEecCCchhhHHHHHHHHHHHHHHHHHHHHhc-cccCCchhHhhHHHHhhhhhc-cCccccCCChhhHHHHHHHH
Q psy14622 619 SGVAVLKVGGSSEVEVNEKKDRVTDALNATRAAVEEG-IVPGGGTALLRCIAVLDKLET-ANADQATGKKEDIDRRADQI 696 (788)
Q Consensus 619 ggvAvI~VGG~Te~EikErk~r~edAl~a~raA~e~G-iVpGGG~all~as~~L~~~~~-~~~~~~~G~~~~i~~r~~~l 696 (788)
++++|.++|+|+.+++|.+++++|||+++|+|+++| +|||||+++++++..|+++.. .+.+++.|
T Consensus 372 -~~~TIllrG~t~~~l~E~er~l~DAl~~~~~~~~~~~vvpGGGa~e~~ls~~l~~~~~~~~~~~~~~------------ 438 (526)
T cd03339 372 -KAVTIFIRGGNKMIIEEAKRSLHDALCVVRNLIRDNRIVYGGGAAEISCSLAVEKAADKCSGIEQYA------------ 438 (526)
T ss_pred -CEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHhhCCCEEeCCCHHHHHHHHHHHHHhccCCCHHHHH------------
Confidence 678999999999999999999999999999999998 999999999999999876421 12222222
Q ss_pred HHHHHhhcChhHHHHHHHHHHHhccCeEEEEecccHHHHHHHHhcchHHHHHHHhCCchHHHHHHHh-----cCCCCeeE
Q psy14622 697 RDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVL-----ESSGEMGY 771 (788)
Q Consensus 697 ~~~~~~~~~~~d~~~l~eRla~Lsggvavi~vGa~~~e~~e~~~r~~~a~~a~~Aa~e~g~Vv~~~~-----~~~~~~Gy 771 (788)
++...++++.+.+++|.|||++...|+.+++ +....+||
T Consensus 439 ------------------------------------~~~~a~aL~~ip~~L~~NaG~d~~~~l~~l~~~h~~~~~~~~Gi 482 (526)
T cd03339 439 ------------------------------------MRAFADALESIPLALAENSGLNPIETLSEVKARQVKEKNPHLGI 482 (526)
T ss_pred ------------------------------------HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcCCCeEee
Confidence 8999999999999999999999999999997 22346899
Q ss_pred EcCCCcccchhhcCC
Q psy14622 772 DAMNNEYVNMIQKVL 786 (788)
Q Consensus 772 da~~~~~~dm~~~Gi 786 (788)
|+.+|+|+||++.||
T Consensus 483 d~~~g~~~d~~~~gV 497 (526)
T cd03339 483 DCLGRGTNDMKEQKV 497 (526)
T ss_pred ecCCCccCchhhcCc
Confidence 999999999999997
No 22
>TIGR02339 thermosome_arch thermosome, various subunits, archaeal. Thermosome is the name given to the archaeal rather than eukaryotic form of the group II chaperonin (counterpart to the group I chaperonin, GroEL/GroES, in bacterial), a torroidal, ATP-dependent molecular chaperone that assists in the folding or refolding of nascent or denatured proteins. Various homologous subunits, one to five per archaeal genome, may be designated alpha, beta, etc., but phylogenetic analysis does not show distinct alpha subunit and beta subunit lineages traceable to ancient paralogs.
Probab=100.00 E-value=5.4e-62 Score=556.50 Aligned_cols=418 Identities=25% Similarity=0.377 Sum_probs=353.0
Q ss_pred EeeccCCCCCcCCCCceeeeecCCCCceEeeChHHhhccccccccccChhhHHHHHHhhhcccccCCCchhHHHHHHHHH
Q psy14622 6 LEQSWGSPKITKDDGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIA 85 (788)
Q Consensus 6 i~~~~~S~kiLGPkG~nkmI~~~~G~~~ITnDGvTIlk~I~l~d~~ehpgAkLl~e~A~~qd~evGDGTTTavVLA~aLL 85 (788)
|.+.++|+ |||+||||||+++.|+++|||||+||+++|+++ ||+|+|++++|.+||+++||||||+++||++|+
T Consensus 28 i~~~v~ts--lGP~G~~k~i~~~~g~~~iTnDG~tIlk~l~~~----hP~a~ll~~~a~~qd~~~GDGTtt~viL~~~ll 101 (519)
T TIGR02339 28 VAEAVKST--LGPRGMDKMLVDSLGDVTITNDGATILKEMDIE----HPAAKMLVEVAKTQDAEVGDGTTTAVVLAGELL 101 (519)
T ss_pred HHHHHhCC--CCCCCCCeeeECCCCCEEEEccHHHHHHhccCC----CHHHHHHHHHHHHHHHHhCCCcccHHHHHHHHH
Confidence 34678899 999999999999999999999999999999998 999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhcCCCCC--CHHHHHHHHHhccCCc-------hHHhhHHHHHHHHhhh
Q psy14622 86 KEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVT--TPEEIAQVATISANGD-------KAVGELISDAMKRVSA 156 (788)
Q Consensus 86 ~eglklI~~Gi~P~~I~~Gi~~A~~~ile~L~~ls~~V~--d~eeL~~VA~tSan~d-------~~Ig~LIadAv~kV~~ 156 (788)
+++++++++|+||+.|++||+.|.+.++++|+++++|++ +.+.+.++|++|+++| +.|++++++|+.++++
T Consensus 102 ~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~s~~v~~~~~~~L~~ia~tsl~sk~~~~~~~~~ls~l~~~A~~~v~~ 181 (519)
T TIGR02339 102 EKAEDLLEQGIHPTVIIEGYRKAAEKALEIIDEIATKISPEDRDLLKKVAETSLTGKASAEVTKDKLANLVVEAVKQVAE 181 (519)
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccccCcccHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999986 4688999999999987 6799999999998411
Q ss_pred ccccccceeeeccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhcccccccccccccccccCC
Q psy14622 157 KVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRFG 236 (788)
Q Consensus 157 ~~e~~d~~ILite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~~~~ 236 (788)
..
T Consensus 182 ~~------------------------------------------------------------------------------ 183 (519)
T TIGR02339 182 KR------------------------------------------------------------------------------ 183 (519)
T ss_pred hc------------------------------------------------------------------------------
Confidence 00
Q ss_pred CccccccccceeecccccccCcccccccccccccccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeeccccC
Q psy14622 237 PEVRGLMLQGVDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVD 316 (788)
Q Consensus 237 ~~~r~~~L~~~~i~~~~~~~tp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 316 (788)
+
T Consensus 184 ----------------------------------~--------------------------------------------- 184 (519)
T TIGR02339 184 ----------------------------------G--------------------------------------------- 184 (519)
T ss_pred ----------------------------------c---------------------------------------------
Confidence 0
Q ss_pred CcceeeEeeecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccccCCCCCchhhhhhh
Q psy14622 317 GEALSTLVVGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFIIELK 396 (788)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (788)
+|.+.+
T Consensus 185 ------------------------------------------~g~~~~-------------------------------- 190 (519)
T TIGR02339 185 ------------------------------------------DGKYYV-------------------------------- 190 (519)
T ss_pred ------------------------------------------CCCccc--------------------------------
Confidence 000000
Q ss_pred hhHHHHHHHHHHhhhccCCCCcEEE--ecCCccceeEEEEEeeEecccccccccccccCCceeEeccceeeccccc----
Q psy14622 397 LVLEYYIQTYIYLCLKVGKEGVITV--KDGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESK---- 470 (788)
Q Consensus 397 ~~~~~~~~~~~~~~~kvG~dGvItv--eeg~~~~~~lev~eG~~fd~GylSpyfvt~~e~~~v~l~~p~ILitD~k---- 470 (788)
|.+ .|.+ ..|.... +.++++|+.|++||.+|. |...++||+||++|.+
T Consensus 191 -~~~-----------------~I~i~k~~Ggs~~-ds~lv~G~vi~~~~~~~~-------m~~~i~n~kIlll~~~Le~~ 244 (519)
T TIGR02339 191 -DLD-----------------NIKIEKKTGGSID-DTELVEGIVVDKEPVHPG-------MPKRVKNAKIALLDAPLEVE 244 (519)
T ss_pred -CHH-----------------HeEEEEccCcChh-cceeEeeEEEecCCCCCC-------CccccCCCcEEEEecccccc
Confidence 000 1122 2344444 678999999999999883 5557899999999999
Q ss_pred ---------ccchhhhHHHHH-----------HHHhcCCCeEEEecCCChhhHHhHHhhhcccccceeeecCCCCcchhh
Q psy14622 471 ---------ISSIQSIIPALE-----------LANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRK 530 (788)
Q Consensus 471 ---------I~~i~~IlP~Le-----------~~~~~~rpLLIIAedi~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~ 530 (788)
|++++++.|+++ .+.+.+.||+|++++|++.||..|..+ |.+. |+. .++
T Consensus 245 ~~~~~~~~~i~~~~~~~~~l~~E~~~i~~~v~~i~~~g~~lvi~~~~I~~~al~~L~~~---gI~~---v~~-----v~~ 313 (519)
T TIGR02339 245 KTEIDAKIRITDPDQIKKFLDQEEAMLKEMVDKIADAGANVVFCQKGIDDLAQHYLAKA---GILA---VRR-----VKK 313 (519)
T ss_pred ccccceEEEECCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEECCCccHHHHHHHHHC---CCEE---Eec-----CCH
Confidence 788999999998 688889999999999999999999743 3333 432 267
Q ss_pred hhhhhhHhhhCCeEeccCCCCCcccccCcccccceeEEEEec---CceEEEcCCCCHHHHHHHHHHHHHHHHhcCChHHH
Q psy14622 531 ATLQDLAVATGGIVFGDEASPVKLEDLQATDLGSVGEIVITK---DDTLILKGKGKKEDIDRRADQIRDQIEATTSDYER 607 (788)
Q Consensus 531 ~~LeDiAilTGg~vis~~~~g~~l~~v~~~~LG~a~~V~vt~---d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~~~~ 607 (788)
..|+|||.+|||++++. +++++.+.||+|++|.+.+ +++++++|.+++.
T Consensus 314 ~~L~rIa~~tGa~ii~~------~~~l~~~~LG~~~~v~~~~ig~~~~~~~~~~~~~~---------------------- 365 (519)
T TIGR02339 314 SDIEKLARATGAKIVSS------IKEITESDLGYAGLVEERKVGDDKMTFVEGCKNPK---------------------- 365 (519)
T ss_pred HHHHHHHHHhCCEEeCc------hhhCChhhccCCceEEEEEECCeEEEEEEcCCCCC----------------------
Confidence 88999999999999973 4667778899999999877 8889998765543
Q ss_pred HHHHHHHHhhcCCeEEEEecCCchhhHHHHHHHHHHHHHHHHHHHHhc-cccCCchhHhhHHHHhhhhhc-cCccccCCC
Q psy14622 608 EKLQERLARLASGVAVLKVGGSSEVEVNEKKDRVTDALNATRAAVEEG-IVPGGGTALLRCIAVLDKLET-ANADQATGK 685 (788)
Q Consensus 608 ~~L~eRla~LsggvAvI~VGG~Te~EikErk~r~edAl~a~raA~e~G-iVpGGG~all~as~~L~~~~~-~~~~~~~G~ 685 (788)
.++|.++|+|+.+++|.+.+++||++++|+|+++| +|||||+++++++..|++... .+.++..+
T Consensus 366 -------------~~TI~lrG~t~~~l~E~~r~i~DAl~~~~~~~~~~~vvpGGGa~e~~ls~~l~~~~~~~~~~~~~~- 431 (519)
T TIGR02339 366 -------------AVTILLRGGTEHVVDELERSIQDALHVVASALEDGKVVAGGGAVEIELALRLRSYARKIGGREQLA- 431 (519)
T ss_pred -------------EEEEEEECCCHHHHHHHHHHHHHHHHHHHHHhcCCCEeeCCCHHHHHHHHHHHHHhhcCCCHHHHH-
Confidence 36799999999999999999999999999999999 999999999999999875421 11111222
Q ss_pred hhhHHHHHHHHHHHHHhhcChhHHHHHHHHHHHhccCeEEEEecccHHHHHHHHhcchHHHHHHHhCCchHHHHHHHhc-
Q psy14622 686 KEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVLE- 764 (788)
Q Consensus 686 ~~~i~~r~~~l~~~~~~~~~~~d~~~l~eRla~Lsggvavi~vGa~~~e~~e~~~r~~~a~~a~~Aa~e~g~Vv~~~~~- 764 (788)
++...++++.+..++|.|||++...|+.++..
T Consensus 432 -----------------------------------------------~~~~a~aL~~ip~~L~~NaG~d~~~~l~~l~~~ 464 (519)
T TIGR02339 432 -----------------------------------------------IEAFADALEEIPRILAENAGLDPIDALVELRAK 464 (519)
T ss_pred -----------------------------------------------HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Confidence 78899999999999999999999999999973
Q ss_pred ---CCCCeeEEcCCCcccchhhcCC
Q psy14622 765 ---SSGEMGYDAMNNEYVNMIQKVL 786 (788)
Q Consensus 765 ---~~~~~Gyda~~~~~~dm~~~Gi 786 (788)
....+|||+.+|+|+||++.||
T Consensus 465 h~~~~~~~Gid~~~g~~~d~~~~gI 489 (519)
T TIGR02339 465 HEKGNKNAGINVFTGEIEDMLELGV 489 (519)
T ss_pred HHccCCceeEEcCCCCccchhhccc
Confidence 2346899999999999999997
No 23
>TIGR02347 chap_CCT_zeta T-complex protein 1, zeta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT zeta chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=8.3e-62 Score=556.32 Aligned_cols=414 Identities=22% Similarity=0.326 Sum_probs=342.4
Q ss_pred EeeccCCCCCcCCCCceeeeecCCCCceEeeChHHhhccccccccccChhhHHHHHHhhhcccccCCCchhHHHHHHHHH
Q psy14622 6 LEQSWGSPKITKDDGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIA 85 (788)
Q Consensus 6 i~~~~~S~kiLGPkG~nkmI~~~~G~~~ITnDGvTIlk~I~l~d~~ehpgAkLl~e~A~~qd~evGDGTTTavVLA~aLL 85 (788)
+.+.++|+ |||+||||||+++.|+++|||||+||+++|+++ ||.++|+.++|.+||+++||||||++|||++|+
T Consensus 28 l~~~vktt--lGP~G~~Kmi~~~~G~~~ITnDG~TIlk~i~i~----hP~a~ll~~~a~~qd~~~GDGTTtvvvLa~~Ll 101 (531)
T TIGR02347 28 LQDVLKTN--LGPKGTLKMLVSGAGDIKLTKDGNVLLNEMQIQ----HPTASMIARAATAQDDITGDGTTSTVILIGELL 101 (531)
T ss_pred HHHHHhcC--CCCCccceEEEcCCCCEEEeccHHHHHHhcccc----ChHHHHHHHHHHHhhhhhcCcHHHHHHHHHHHH
Confidence 34678899 999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhcCCCC---CCHHHHHHHHHhccCC------chHHhhHHHHHHHHhhh
Q psy14622 86 KEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPV---TTPEEIAQVATISANG------DKAVGELISDAMKRVSA 156 (788)
Q Consensus 86 ~eglklI~~Gi~P~~I~~Gi~~A~~~ile~L~~ls~~V---~d~eeL~~VA~tSan~------d~~Ig~LIadAv~kV~~ 156 (788)
+++.+++++|+||..|++||+.|.+.+++.|+++++++ .+.+.+.++|++|+++ ++.|++++++|+.++++
T Consensus 102 ~~a~~li~~gihp~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~l~~ia~tsl~sK~~~~~~~~ls~iv~~Av~~v~~ 181 (531)
T TIGR02347 102 KQAERYILEGIHPRILTEGFEIARGELLEFLDKFKIKTEDEVDRELLLNVARTSLRTKLPIDLADQLTEIVVDAVLAIKK 181 (531)
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHHHHHhccccchhhHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999764 4788999999999988 47899999999998411
Q ss_pred ccccccceeeeccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhcccccccccccccccccCC
Q psy14622 157 KVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRFG 236 (788)
Q Consensus 157 ~~e~~d~~ILite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~~~~ 236 (788)
. |
T Consensus 182 ~------------------------------------------------------------------------------~ 183 (531)
T TIGR02347 182 D------------------------------------------------------------------------------G 183 (531)
T ss_pred c------------------------------------------------------------------------------C
Confidence 0 0
Q ss_pred CccccccccceeecccccccCcccccccccccccccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeeccccC
Q psy14622 237 PEVRGLMLQGVDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVD 316 (788)
Q Consensus 237 ~~~r~~~L~~~~i~~~~~~~tp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 316 (788)
. ...++.
T Consensus 184 ~---~i~~~~---------------------------------------------------------------------- 190 (531)
T TIGR02347 184 E---QIDLFM---------------------------------------------------------------------- 190 (531)
T ss_pred C---CCChhH----------------------------------------------------------------------
Confidence 0 000000
Q ss_pred CcceeeEeeecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccccCCCCCchhhhhhh
Q psy14622 317 GEALSTLVVGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFIIELK 396 (788)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (788)
T Consensus 191 -------------------------------------------------------------------------------- 190 (531)
T TIGR02347 191 -------------------------------------------------------------------------------- 190 (531)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhHHHHHHHHHHhhhccCCCCcEEE--ecCCccceeEEEEEeeEecccccccccccccCCceeEeccceeecccccccch
Q psy14622 397 LVLEYYIQTYIYLCLKVGKEGVITV--KDGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESKISSI 474 (788)
Q Consensus 397 ~~~~~~~~~~~~~~~kvG~dGvItv--eeg~~~~~~lev~eG~~fd~GylSpyfvt~~e~~~v~l~~p~ILitD~kI~~i 474 (788)
|.+ ..| +..++.++++|+.|++||.+|||.+ .++||+||++|.+|+..
T Consensus 191 ----------------------I~i~k~~g-~s~~ds~~v~Giv~~~~~~~~~~~~-------~~~n~~Ill~~~~le~~ 240 (531)
T TIGR02347 191 ----------------------VEIMEMKH-KSATDTTLIRGLVLDHGARHPDMPR-------RVKNAYILTCNVSLEYE 240 (531)
T ss_pred ----------------------eEEEEecC-CCccccEEEeeEEEecCcCCCCCce-------eccCceEEEEeCCCCCC
Confidence 111 112 2345778999999999999999843 67899999999999744
Q ss_pred h-------------------------------hhHHHHHHHHhc--CCC-eEEEecCCChhhHHhHHhhhcccccceeee
Q psy14622 475 Q-------------------------------SIIPALELANSK--RKP-LVILAEDVDGEALSTLVVNRLKIGLQVAAV 520 (788)
Q Consensus 475 ~-------------------------------~IlP~Le~~~~~--~rp-LLIIAedi~~eAL~~Lv~N~~rg~~~v~AV 520 (788)
+ +|+++.+.+++. +.+ |++..++|++.++..|..++ ++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~v~~I~~~~~~~~~~~~~~~~lvi~~k~I~~~a~~~L~~~~------I~~i 314 (531)
T TIGR02347 241 KTEVNSGFFYSNAEQREKLVEAERKFVDDRVKKIIELKKKVCGKSPDKGFVVINQKGIDPPSLDLLAKEG------IMAL 314 (531)
T ss_pred ccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCccEEEEeCCCccHHHHHHHHHCC------ceEE
Confidence 2 222222221111 235 55557899999999999764 3566
Q ss_pred cCCCCcchhhhhhhhhHhhhCCeEeccCCCCCcccccCcccccceeEE---EEecCceEEEcCCCCHHHHHHHHHHHHHH
Q psy14622 521 KAPGFGDNRKATLQDLAVATGGIVFGDEASPVKLEDLQATDLGSVGEI---VITKDDTLILKGKGKKEDIDRRADQIRDQ 597 (788)
Q Consensus 521 kaP~fG~~R~~~LeDiAilTGg~vis~~~~g~~l~~v~~~~LG~a~~V---~vt~d~Ttii~g~g~~~~I~~R~~~l~~~ 597 (788)
|-. ++..|+|||.+|||++++ ++++++.++||+|++| .++.++++++++.+++
T Consensus 315 ~rv-----~~~~le~ia~~tGa~~i~------~l~~~~~~~LG~~~~v~~~~ig~~~~~~i~~~~~~------------- 370 (531)
T TIGR02347 315 RRA-----KRRNMERLTLACGGEALN------SVEDLTPECLGWAGLVYETSIGEEKYTFIEEVKNP------------- 370 (531)
T ss_pred ccC-----CHHHHHHHHHHhCCEEec------ccccCCccccccceEEEEEEECCeEEEEEEcCCCC-------------
Confidence 532 367899999999999996 4678888999999999 8999999999887654
Q ss_pred HHhcCChHHHHHHHHHHHhhcCCeEEEEecCCchhhHHHHHHHHHHHHHHHHHHHHhc-cccCCchhHhhHHHHhhhhhc
Q psy14622 598 IEATTSDYEREKLQERLARLASGVAVLKVGGSSEVEVNEKKDRVTDALNATRAAVEEG-IVPGGGTALLRCIAVLDKLET 676 (788)
Q Consensus 598 ~~~~~s~~~~~~L~eRla~LsggvAvI~VGG~Te~EikErk~r~edAl~a~raA~e~G-iVpGGG~all~as~~L~~~~~ 676 (788)
++++|.+||+|+.+++|++++++||+|++|+|+++| +|||||+++++++..|.++..
T Consensus 371 ----------------------~~~TI~lrG~t~~~l~E~er~l~DAl~v~~~~~~~~~vvpGGGa~E~~ls~~l~~~~~ 428 (531)
T TIGR02347 371 ----------------------KSCTILIKGPNDHTIKQIKDAVRDGLRAVKNAIEDKCVVPGAGAFEIAAYCHLKEEKK 428 (531)
T ss_pred ----------------------CeEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHhhCCcEEeCCCHHHHHHHHHHHHHhh
Confidence 369999999999999999999999999999999999 999999999999999876532
Q ss_pred -cCccccCCChhhHHHHHHHHHHHHHhhcChhHHHHHHHHHHHhccCeEEEEecccHHHHHHHHhcchHHHHHHHhCCch
Q psy14622 677 -ANADQATGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSVEIVKKALRQPCMTIATNAGVDA 755 (788)
Q Consensus 677 -~~~~~~~G~~~~i~~r~~~l~~~~~~~~~~~d~~~l~eRla~Lsggvavi~vGa~~~e~~e~~~r~~~a~~a~~Aa~e~ 755 (788)
.+.+++.| ++...++++.+.+++|.|||+++
T Consensus 429 ~~~~~~~~~------------------------------------------------i~~fa~ALe~ip~~La~NaG~d~ 460 (531)
T TIGR02347 429 SVKGKAKLG------------------------------------------------VEAFANALLVIPKTLAENSGLDA 460 (531)
T ss_pred cCCCHHHHH------------------------------------------------HHHHHHHHHHHHHHHHHhcCCCH
Confidence 12222222 89999999999999999999999
Q ss_pred HHHHHHHhcC----CCCeeEEcCCCcccchhhcCC
Q psy14622 756 SVVVNKVLES----SGEMGYDAMNNEYVNMIQKVL 786 (788)
Q Consensus 756 g~Vv~~~~~~----~~~~Gyda~~~~~~dm~~~Gi 786 (788)
..|+.+++.. ...+|||+.+|+|+||++.||
T Consensus 461 ~~vl~~l~~~~~~~~~~~Gid~~~g~~~d~~~~gV 495 (531)
T TIGR02347 461 QDTLVKLEDEHDEGGEVVGVDLETGEPIDPEIKGI 495 (531)
T ss_pred HHHHHHHHHHHHccCCceeeeccCCCccchhhccC
Confidence 9999998642 135899999999999999997
No 24
>cd03335 TCP1_alpha TCP-1 (CTT or eukaryotic type II) chaperonin family, alpha subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=3.3e-61 Score=551.03 Aligned_cols=424 Identities=23% Similarity=0.315 Sum_probs=352.5
Q ss_pred EeeccCCCCCcCCCCceeeeecCCCCceEeeChHHhhccccccccccChhhHHHHHHhhhcccccCCCchhHHHHHHHHH
Q psy14622 6 LEQSWGSPKITKDDGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIA 85 (788)
Q Consensus 6 i~~~~~S~kiLGPkG~nkmI~~~~G~~~ITnDGvTIlk~I~l~d~~ehpgAkLl~e~A~~qd~evGDGTTTavVLA~aLL 85 (788)
+.+.++|+ |||+||||||+++.|+++|||||+||+++|+++ ||.|+|++++|++||+++||||||++|||++|+
T Consensus 20 l~~~v~ts--lGP~G~~kmi~~~~g~~~iTnDG~tIlk~i~~~----hP~akll~~~a~~q~~~~GDGTTt~vvLa~~ll 93 (527)
T cd03335 20 IANIVKSS--LGPVGLDKMLVDDIGDVTITNDGATILKLLEVE----HPAAKILVELAQLQDKEVGDGTTSVVIIAAELL 93 (527)
T ss_pred HHHHHhcC--cCCCcCceEEEcCCCCEEEeCcHHHHHHhcccc----ChHHHHHHHHHHHHHHHhCCCcchHHHHHHHHH
Confidence 34678899 999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHh-cCCCCC--CHHHHHHHHHhccCCc------hHHhhHHHHHHHHhhh
Q psy14622 86 KEGFEKISKGANPIEIRRGVMLAVETIKTHLKE-LSKPVT--TPEEIAQVATISANGD------KAVGELISDAMKRVSA 156 (788)
Q Consensus 86 ~eglklI~~Gi~P~~I~~Gi~~A~~~ile~L~~-ls~~V~--d~eeL~~VA~tSan~d------~~Ig~LIadAv~kV~~ 156 (788)
+++++++++|+||..|++||++|.+.+++.|++ +++|++ +.+.+.++|++|++++ +.+++++++|+..++.
T Consensus 94 ~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~l~~ia~tsl~sK~~~~~~~~ls~l~~~A~~~v~~ 173 (527)
T cd03335 94 KRANELVKQKIHPTTIISGYRLACKEAVKYIKEHLSISVDNLGKESLINVAKTSMSSKIIGADSDFFANMVVDAILAVKT 173 (527)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhccCCCccCHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999999999999996 899987 7889999999999864 6899999999987310
Q ss_pred ccccccceeeeccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhcccccccccccccccccCC
Q psy14622 157 KVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRFG 236 (788)
Q Consensus 157 ~~e~~d~~ILite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~~~~ 236 (788)
++
T Consensus 174 ------------------------------------------------------------------------------~~ 175 (527)
T cd03335 174 ------------------------------------------------------------------------------TN 175 (527)
T ss_pred ------------------------------------------------------------------------------cc
Confidence 00
Q ss_pred C-ccccccccceeecccccccCcccccccccccccccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeecccc
Q psy14622 237 P-EVRGLMLQGVDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDV 315 (788)
Q Consensus 237 ~-~~r~~~L~~~~i~~~~~~~tp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (788)
+ ......++.+.
T Consensus 176 ~~~~~~~~~~~I~------------------------------------------------------------------- 188 (527)
T cd03335 176 EKGKTKYPIKAVN------------------------------------------------------------------- 188 (527)
T ss_pred ccCCCccCHHHeE-------------------------------------------------------------------
Confidence 0 00000000000
Q ss_pred CCcceeeEeeecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccccCCCCCchhhhhh
Q psy14622 316 DGEALSTLVVGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFIIEL 395 (788)
Q Consensus 316 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (788)
T Consensus 189 -------------------------------------------------------------------------------- 188 (527)
T cd03335 189 -------------------------------------------------------------------------------- 188 (527)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhHHHHHHHHHHhhhccCCCCcEEEecCCccceeEEEEEeeEecccccccccccccCCceeEeccceeecccccccchh
Q psy14622 396 KLVLEYYIQTYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESKISSIQ 475 (788)
Q Consensus 396 ~~~~~~~~~~~~~~~~kvG~dGvItveeg~~~~~~lev~eG~~fd~GylSpyfvt~~e~~~v~l~~p~ILitD~kI~~i~ 475 (788)
|....|.+.. +.++++|+.|++||.+| +|...++||+||++|.+|+..+
T Consensus 189 -----------------------i~~~~Ggs~~-~s~li~Givi~~~~~~~-------~m~~~i~n~kIlll~~~Le~~~ 237 (527)
T cd03335 189 -----------------------ILKAHGKSAK-ESYLVNGYALNCTRASQ-------GMPTRVKNAKIACLDFNLQKTK 237 (527)
T ss_pred -----------------------EEEecCcChh-hcceeeeEEEecccCCC-------CCcccccCCcEEEEeccCCCCc
Confidence 1112343444 67889999999999987 4555789999999999997521
Q ss_pred ------------------------hhHHHHHHHHhcCCCeEEEecCCChhhHHhHHhhhcccccceeeecCCCCcchhhh
Q psy14622 476 ------------------------SIIPALELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKA 531 (788)
Q Consensus 476 ------------------------~IlP~Le~~~~~~rpLLIIAedi~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~~ 531 (788)
.+.+.++.+.+.+.||||++++|+++||..|..| .+.+++- .++.
T Consensus 238 ~~~~~~~~~~~~~~le~~~~~E~~~l~~~i~~i~~~g~~lvi~~k~I~d~al~~L~~~------~I~~v~~-----v~~~ 306 (527)
T cd03335 238 MKLGVQVVVTDPEKLEKIRQRESDITKERIKKILAAGANVVLTTGGIDDMCLKYFVEA------GAMAVRR-----VKKE 306 (527)
T ss_pred cccceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEeCCCCcHHHHHHHHHC------CcEEEEe-----CCHH
Confidence 1336677777899999999999999999999986 2344442 2678
Q ss_pred hhhhhHhhhCCeEeccCCCCC-cccccCcccccceeEEE---EecCceEEEcCCCCHHHHHHHHHHHHHHHHhcCChHHH
Q psy14622 532 TLQDLAVATGGIVFGDEASPV-KLEDLQATDLGSVGEIV---ITKDDTLILKGKGKKEDIDRRADQIRDQIEATTSDYER 607 (788)
Q Consensus 532 ~LeDiAilTGg~vis~~~~g~-~l~~v~~~~LG~a~~V~---vt~d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~~~~ 607 (788)
.|+|||.+|||++++.. .+. ..+++++++||+|++|. ++.+++++++|.++
T Consensus 307 ~lerIa~~tGa~ii~~~-~~l~~~~~~~~~~LG~~~~v~~~~ig~~~~~~i~g~~~------------------------ 361 (527)
T cd03335 307 DLRRIAKATGATLVSTL-ANLEGEETFDPSYLGEAEEVVQERIGDDELILIKGTKK------------------------ 361 (527)
T ss_pred HHHHHHHHhCCEEecCh-hhcCcccccCHhhCccCceEEEEEECCeEEEEEEcCCC------------------------
Confidence 89999999999999875 222 33566778999999998 88889999987654
Q ss_pred HHHHHHHHhhcCCeEEEEecCCchhhHHHHHHHHHHHHHHHHHHHHhc-cccCCchhHhhHHHHhhhhhc-cCccccCCC
Q psy14622 608 EKLQERLARLASGVAVLKVGGSSEVEVNEKKDRVTDALNATRAAVEEG-IVPGGGTALLRCIAVLDKLET-ANADQATGK 685 (788)
Q Consensus 608 ~~L~eRla~LsggvAvI~VGG~Te~EikErk~r~edAl~a~raA~e~G-iVpGGG~all~as~~L~~~~~-~~~~~~~G~ 685 (788)
+++++|.++|+|+.+++|++++++||++++|+|+++| +|||||+++++++..|.++.. .+.++..|
T Consensus 362 -----------~~~~TIllrG~t~~~l~e~er~i~Dal~~~~~~~~~~~vvpGGGa~e~~ls~~L~~~~~~~~~~~~~~- 429 (527)
T cd03335 362 -----------RSSASIILRGANDFMLDEMERSLHDALCVVKRTLESNSVVPGGGAVETALSIYLENFATTLGSREQLA- 429 (527)
T ss_pred -----------CCEEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhCCCEeeCCCHHHHHHHHHHHHHHhccCcHHHHH-
Confidence 6789999999999999999999999999999999999 999999999999999876532 12122222
Q ss_pred hhhHHHHHHHHHHHHHhhcChhHHHHHHHHHHHhccCeEEEEecccHHHHHHHHhcchHHHHHHHhCCchHHHHHHHhcC
Q psy14622 686 KEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVLES 765 (788)
Q Consensus 686 ~~~i~~r~~~l~~~~~~~~~~~d~~~l~eRla~Lsggvavi~vGa~~~e~~e~~~r~~~a~~a~~Aa~e~g~Vv~~~~~~ 765 (788)
++...++++.+.+++|.|||+++..++.+++..
T Consensus 430 -----------------------------------------------i~~~a~aL~~ip~~La~NaG~d~~~~~~~l~~~ 462 (527)
T cd03335 430 -----------------------------------------------IAEFAEALLVIPKTLAVNAAKDATELVAKLRAY 462 (527)
T ss_pred -----------------------------------------------HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
Confidence 899999999999999999999999999998641
Q ss_pred ------------CCCeeEEcCCCcccchhhcCC
Q psy14622 766 ------------SGEMGYDAMNNEYVNMIQKVL 786 (788)
Q Consensus 766 ------------~~~~Gyda~~~~~~dm~~~Gi 786 (788)
...+|||+.+|+|+||++.||
T Consensus 463 h~~~~~~~~~~~~~~~Gid~~~g~~~d~~~~gV 495 (527)
T cd03335 463 HAAAQVKPDKKHLKWYGLDLINGKVRDNLEAGV 495 (527)
T ss_pred HHhcCCccccccCceEeEECCCCcccchhhccc
Confidence 235899999999999999997
No 25
>TIGR02343 chap_CCT_epsi T-complex protein 1, epsilon subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT epsilon chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=2.1e-61 Score=553.30 Aligned_cols=428 Identities=25% Similarity=0.367 Sum_probs=351.0
Q ss_pred eeccCCCCCcCCCCceeeeecCCCCceEeeChHHhhccccccccccChhhHHHHHHhhhcccccCCCchhHHHHHHHHHH
Q psy14622 7 EQSWGSPKITKDDGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIAK 86 (788)
Q Consensus 7 ~~~~~S~kiLGPkG~nkmI~~~~G~~~ITnDGvTIlk~I~l~d~~ehpgAkLl~e~A~~qd~evGDGTTTavVLA~aLL~ 86 (788)
.+.++|+ |||+||||||+++.|+++|||||+||+++|+++ ||.|+|++++|.+||+++||||||+++||++|++
T Consensus 40 ~~~vktt--lGP~G~~KmI~~~~G~~~ITnDG~tIlk~l~~~----hP~akll~~~a~~qd~~~GDGTttvvvLa~~Ll~ 113 (532)
T TIGR02343 40 ASILRTS--LGPKGMDKMLQSPDGDITVTNDGATILSQMDVD----NPIAKLMVELSKSQDDEIGDGTTGVVVLAGALLE 113 (532)
T ss_pred HHHHhCC--CCCCCCeEEEEcCCCCEEEeCcHHHHHHHccCC----CHHHHHHHHHHHHHHHHhcCCcccHHHHHHHHHH
Confidence 4568899 999999999999999999999999999999998 9999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhcCCCCC----CHHHHHHHHHhccCCchHHhhHHHHHHHHhhhcccccc
Q psy14622 87 EGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVT----TPEEIAQVATISANGDKAVGELISDAMKRVSAKVEFQD 162 (788)
Q Consensus 87 eglklI~~Gi~P~~I~~Gi~~A~~~ile~L~~ls~~V~----d~eeL~~VA~tSan~d~~Ig~LIadAv~kV~~~~e~~d 162 (788)
++++++++|+||..|++||+.|.+.+++.|+++++++. +.+.+.++|++|++++ +++..++++.++.-
T Consensus 114 ~a~~li~~gihp~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~l~~ia~t~l~sK--~~~~~~~~ls~i~~------ 185 (532)
T TIGR02343 114 QAEALLDKGIHPIKIAEGFEVAARVAVEHLEEISEEISDDNNNKEPLIQAAKTSLGSK--IVSKCHRRFAEIAV------ 185 (532)
T ss_pred HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccccCcCCCCHHHHHHHHHHhhccc--hhhHHHHHHHHHHH------
Confidence 99999999999999999999999999999999999875 3678999999999865 44445555544200
Q ss_pred ceeeeccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhcccccccccccccccccCCCccccc
Q psy14622 163 ALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRFGPEVRGL 242 (788)
Q Consensus 163 ~~ILite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~~~~~~~r~~ 242 (788)
+ +++. +..++. ..-
T Consensus 186 -----------------------------------------------~---av~~---------------i~~~~~-~~~ 199 (532)
T TIGR02343 186 -----------------------------------------------D---AVLM---------------VADMER-RDV 199 (532)
T ss_pred -----------------------------------------------H---HHHh---------------hhhcCC-CcC
Confidence 0 0000 000000 000
Q ss_pred cccceeecccccccCcccccccccccccccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeeccccCCcceee
Q psy14622 243 MLQGVDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALST 322 (788)
Q Consensus 243 ~L~~~~i~~~~~~~tp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 322 (788)
+++.+
T Consensus 200 d~~~I--------------------------------------------------------------------------- 204 (532)
T TIGR02343 200 DFDLI--------------------------------------------------------------------------- 204 (532)
T ss_pred CHHHe---------------------------------------------------------------------------
Confidence 00000
Q ss_pred EeeecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccccCCCCCchhhhhhhhhHHHH
Q psy14622 323 LVVGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFIIELKLVLEYY 402 (788)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (788)
T Consensus 205 -------------------------------------------------------------------------------- 204 (532)
T TIGR02343 205 -------------------------------------------------------------------------------- 204 (532)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhhhccCCCCcEEEecCCccceeEEEEEeeEecccccccccccccCC-----ceeEeccceeeccccc--ccchh
Q psy14622 403 IQTYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFINTAKG-----AKVEFQDALVLLSESK--ISSIQ 475 (788)
Q Consensus 403 ~~~~~~~~~kvG~dGvItveeg~~~~~~lev~eG~~fd~GylSpyfvt~~e~-----~~v~l~~p~ILitD~k--I~~i~ 475 (788)
.++. -.|.+..++ ++++|+.|++||.+|||++..++ ..+.|+.|++ .++.+ +++++
T Consensus 205 --------------~i~k-i~Ggs~~ds-~~v~Gi~i~~~~~~~~m~~~~~n~kI~l~~~~le~~~~-~~~~~~~i~~~~ 267 (532)
T TIGR02343 205 --------------KVEG-KVGGSLEDT-KLIKGIIIDKDFSHPQMPKEVKDAKIAILTCPFEPPKP-KTKHKLDISSVE 267 (532)
T ss_pred --------------eEEE-ecCCCcccc-eeEeeEEEecCcCCCCCCeeecCCcEEEEEeecccccc-ccceeEEeCCHH
Confidence 0111 145566666 89999999999999999999888 7788898988 57777 77887
Q ss_pred hh-----------HHHHHHHHhcCCCeEEEecCCChhhHHhHHhhhcccccceeeecCCCCcchhhhhhhhhHhhhCCeE
Q psy14622 476 SI-----------IPALELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATLQDLAVATGGIV 544 (788)
Q Consensus 476 ~I-----------lP~Le~~~~~~rpLLIIAedi~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~~~LeDiAilTGg~v 544 (788)
++ .++++.+.+.+.||||++++|++.|+..|..|++. +||.+ |.++ |+|||.+|||++
T Consensus 268 ~~~~~~~~E~~~l~~~l~~i~~~g~~lvi~~~~I~~~al~~L~~~~i~------~v~~~--~~~~---l~~Ia~~tGa~~ 336 (532)
T TIGR02343 268 EYKKLQKYEQQKFAEMIDDIKKSGANIVICQWGFDDEANHLLLQNDLP------AVRWV--GGHE---LELIAIATGGRI 336 (532)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCEEEeCCCccHHHHHHHHHCCcE------EEEcC--CHHH---HHHHHHHhCCEE
Confidence 76 89999999999999999999999999999999664 46643 3333 999999999999
Q ss_pred eccCCCCCcccccCcccccceeEEE-----EecCceEEEcCCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHhhcC
Q psy14622 545 FGDEASPVKLEDLQATDLGSVGEIV-----ITKDDTLILKGKGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLAS 619 (788)
Q Consensus 545 is~~~~g~~l~~v~~~~LG~a~~V~-----vt~d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~~~~~~L~eRla~Lsg 619 (788)
++ ++++++.++||+|++|. .+.++++++++.+++.
T Consensus 337 i~------~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~i~~~~~~~---------------------------------- 376 (532)
T TIGR02343 337 VP------RFEELSEDKLGKAGLVREISFGTTKDRMLVIEQCKNSK---------------------------------- 376 (532)
T ss_pred ec------ccccCCHhHCcccceEEEEEecCCcceEEEEECCCCCC----------------------------------
Confidence 98 46788889999999997 3335788888776543
Q ss_pred CeEEEEecCCchhhHHHHHHHHHHHHHHHHHHHHh-ccccCCchhHhhHHHHhhhhhc-cCccccCCChhhHHHHHHHHH
Q psy14622 620 GVAVLKVGGSSEVEVNEKKDRVTDALNATRAAVEE-GIVPGGGTALLRCIAVLDKLET-ANADQATGKKEDIDRRADQIR 697 (788)
Q Consensus 620 gvAvI~VGG~Te~EikErk~r~edAl~a~raA~e~-GiVpGGG~all~as~~L~~~~~-~~~~~~~G~~~~i~~r~~~l~ 697 (788)
+++|.++|+|+.+++|++.+++||++++|+|+++ |+|||||+++++++..|+.... .+..++.|
T Consensus 377 -~~TIllrG~t~~~l~E~er~l~DAl~~v~~~i~~~~vvpGGGa~e~~ls~~l~~~~~~~~~~~~~~------------- 442 (532)
T TIGR02343 377 -AVTIFIRGGNKMIIEEAKRSIHDALCVVRNLIKNSRIVYGGGAAEISCSLAVSQEADKYSGVEQYA------------- 442 (532)
T ss_pred -EEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHhCCCEEeCcCHHHHHHHHHHHHHhccCCcHHHHH-------------
Confidence 6899999999999999999999999999999998 8999999999999999875421 11122222
Q ss_pred HHHHhhcChhHHHHHHHHHHHhccCeEEEEecccHHHHHHHHhcchHHHHHHHhCCchHHHHHHHhc-----CCCCeeEE
Q psy14622 698 DQIEATTSDYEREKLQERLARLASGVAVLKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVLE-----SSGEMGYD 772 (788)
Q Consensus 698 ~~~~~~~~~~d~~~l~eRla~Lsggvavi~vGa~~~e~~e~~~r~~~a~~a~~Aa~e~g~Vv~~~~~-----~~~~~Gyd 772 (788)
++...++++.+.+++|.|||++.-.|+.+++. ....+|||
T Consensus 443 -----------------------------------i~~fa~ALe~ip~~La~NaG~d~~~~l~~l~~~h~~~~~~~~Gid 487 (532)
T TIGR02343 443 -----------------------------------IRAFADALEEIPMALAENSGLDPIGTLSDLKSLQMKEKNPHLGVD 487 (532)
T ss_pred -----------------------------------HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcCCCccCee
Confidence 88999999999999999999999999888863 23458999
Q ss_pred cCCCcccchhhcCC
Q psy14622 773 AMNNEYVNMIQKVL 786 (788)
Q Consensus 773 a~~~~~~dm~~~Gi 786 (788)
+.+|+|+||++.||
T Consensus 488 ~~~g~i~d~~~~gV 501 (532)
T TIGR02343 488 CLGDGTNDMKEQGV 501 (532)
T ss_pred CCCCccccchhccC
Confidence 99999999999997
No 26
>PTZ00212 T-complex protein 1 subunit beta; Provisional
Probab=100.00 E-value=2.9e-62 Score=560.46 Aligned_cols=412 Identities=21% Similarity=0.324 Sum_probs=335.7
Q ss_pred EeeccCCCCCcCCCCceeeeecC-----CCCceEeeChHHhhccccccccccChhhHHHHHHhhhcccccCCCchhHHHH
Q psy14622 6 LEQSWGSPKITKDDGRNVILEQS-----WGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVL 80 (788)
Q Consensus 6 i~~~~~S~kiLGPkG~nkmI~~~-----~G~~~ITnDGvTIlk~I~l~d~~ehpgAkLl~e~A~~qd~evGDGTTTavVL 80 (788)
+.+.++|+ |||+||||||+++ +|+++|||||+||+++|+++ ||+|+|++++|.+||+++||||||+++|
T Consensus 34 i~~~vktt--lGP~G~~Kmi~~~~~~~~~G~~~iTnDG~TIlk~i~~~----hP~akll~~~a~~qd~~~GDGTTtvvvL 107 (533)
T PTZ00212 34 VADLVKTT--LGPKGMDKILQPMSEGPRSGNVTVTNDGATILKSVWLD----NPAAKILVDISKTQDEEVGDGTTSVVVL 107 (533)
T ss_pred HHHHHhCC--CCCCccceEeecCCCcccCCCEEEeccHHHHHHhccCc----CHHHHHHHHHHHhhhhhhCCchhHHHHH
Confidence 34678899 9999999999998 69999999999999999999 9999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhcCCCCCC-----HHHHHHHHHhccCCchHHhhHHHHHHHHhh
Q psy14622 81 ARAIAKEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVTT-----PEEIAQVATISANGDKAVGELISDAMKRVS 155 (788)
Q Consensus 81 A~aLL~eglklI~~Gi~P~~I~~Gi~~A~~~ile~L~~ls~~V~d-----~eeL~~VA~tSan~d~~Ig~LIadAv~kV~ 155 (788)
|++|++++++++++|+||..|++||++|.+.+++.|+++++|+++ .++|.+||+|+++++ +++..++++.++.
T Consensus 108 a~~Ll~~a~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~l~~va~t~l~sk--~~~~~~~~l~~i~ 185 (533)
T PTZ00212 108 AGELLREAEKLLDQKIHPQTIIEGWRMALDVARKALEEIAFDHGSDEEKFKEDLLNIARTTLSSK--LLTVEKDHFAKLA 185 (533)
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhCcCCCccchhhHHHHHHHHHHHhccc--ccchhHHHHHHHH
Confidence 999999999999999999999999999999999999999999864 578999999999876 4444445554410
Q ss_pred hccccccceeeeccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhcccccccccccccccccC
Q psy14622 156 AKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRF 235 (788)
Q Consensus 156 ~~~e~~d~~ILite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~~~ 235 (788)
T Consensus 186 -------------------------------------------------------------------------------- 185 (533)
T PTZ00212 186 -------------------------------------------------------------------------------- 185 (533)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCccccccccceeecccccccCcccccccccccccccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeecccc
Q psy14622 236 GPEVRGLMLQGVDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDV 315 (788)
Q Consensus 236 ~~~~r~~~L~~~~i~~~~~~~tp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (788)
T Consensus 186 -------------------------------------------------------------------------------- 185 (533)
T PTZ00212 186 -------------------------------------------------------------------------------- 185 (533)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCcceeeEeeecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccccCCCCCchhhhhh
Q psy14622 316 DGEALSTLVVGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFIIEL 395 (788)
Q Consensus 316 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (788)
T Consensus 186 -------------------------------------------------------------------------------- 185 (533)
T PTZ00212 186 -------------------------------------------------------------------------------- 185 (533)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhHHHHHHHHHHhhhccCCCCcEEEecCCccce-eEEEEEeeEecccccccccccccC---CceeEeccceeecccccc
Q psy14622 396 KLVLEYYIQTYIYLCLKVGKEGVITVKDGKTLTD-ELEVIEGMKFDRGYISPYFINTAK---GAKVEFQDALVLLSESKI 471 (788)
Q Consensus 396 ~~~~~~~~~~~~~~~~kvG~dGvItveeg~~~~~-~lev~eG~~fd~GylSpyfvt~~e---~~~v~l~~p~ILitD~kI 471 (788)
.+|+++++++..+++ .+..+.|..|+++|++|||+.+.+ .|...++||+||++|.+|
T Consensus 186 -------------------~~av~~i~~~~~~~~I~i~ki~Ggsi~ds~lv~G~v~~~~~~~~~~~~i~n~kIll~~~~L 246 (533)
T PTZ00212 186 -------------------VDAVLRLKGSGNLDYIQIIKKPGGTLRDSYLEDGFILEKKIGVGQPKRLENCKILVANTPM 246 (533)
T ss_pred -------------------HHHHHHHhccCCccceEEEEecCcCccccEEEEeEEEecccCCCCCccccCCcEEEEeCCC
Confidence 000000111112222 566778999999999999998877 788899999999999997
Q ss_pred --------------cchhhhHHHHHHHH------------hcCCCeEEEecCCChhhHHhHHhhhcccccceeeec-CCC
Q psy14622 472 --------------SSIQSIIPALELAN------------SKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVK-APG 524 (788)
Q Consensus 472 --------------~~i~~IlP~Le~~~------------~~~rpLLIIAedi~~eAL~~Lv~N~~rg~~~v~AVk-aP~ 524 (788)
++++++ |.++... +.+-.+++....|++.++..|.-+ .++||| .|
T Consensus 247 e~~k~~~~~~~~~i~~~~~~-~~l~~~E~~~i~~~v~~Ii~~gv~vvv~~~~I~d~a~~~L~~~------~I~avr~v~- 318 (533)
T PTZ00212 247 DTDKIKIYGAKVKVDSMEKV-AEIEAAEKEKMKNKVDKILAHGCNVFINRQLIYNYPEQLFAEA------GIMAIEHAD- 318 (533)
T ss_pred CCCcccccCceEEeCCHHHH-HHHHHHHHHHHHHHHHHHHhcCCeEEEeCCCccHHHHHHHHHC------CCEEEecCC-
Confidence 666664 5443322 223333333456666666655544 268888 44
Q ss_pred CcchhhhhhhhhHhhhCCeEeccCCCCCcccccCcccccceeEEE---EecCceEEEcCCCCHHHHHHHHHHHHHHHHhc
Q psy14622 525 FGDNRKATLQDLAVATGGIVFGDEASPVKLEDLQATDLGSVGEIV---ITKDDTLILKGKGKKEDIDRRADQIRDQIEAT 601 (788)
Q Consensus 525 fG~~R~~~LeDiAilTGg~vis~~~~g~~l~~v~~~~LG~a~~V~---vt~d~Ttii~g~g~~~~I~~R~~~l~~~~~~~ 601 (788)
+..|+|||..|||++++ ++++++.++||+|++|. ++.++++++.|.
T Consensus 319 -----~~~l~rIa~~tGa~iis------~l~~~~~~~LG~~~~v~~~~ig~~~~~~~~~~-------------------- 367 (533)
T PTZ00212 319 -----FDGMERLAAALGAEIVS------TFDTPEKVKLGHCDLIEEIMIGEDKLIRFSGC-------------------- 367 (533)
T ss_pred -----HHHHHHHHHHhCCEEee------cCCCCCHHHccCCceEEEEEECCeEEEEEEcc--------------------
Confidence 34589999999999997 35677888999999998 777888888762
Q ss_pred CChHHHHHHHHHHHhhcCCeEEEEecCCchhhHHHHHHHHHHHHHHHHHHHHhc-cccCCchhHhhHHHHhhhhhc-cCc
Q psy14622 602 TSDYEREKLQERLARLASGVAVLKVGGSSEVEVNEKKDRVTDALNATRAAVEEG-IVPGGGTALLRCIAVLDKLET-ANA 679 (788)
Q Consensus 602 ~s~~~~~~L~eRla~LsggvAvI~VGG~Te~EikErk~r~edAl~a~raA~e~G-iVpGGG~all~as~~L~~~~~-~~~ 679 (788)
..+++++|.+||+|+.+++|++++++|||+++|+|+++| +|||||+++++++..|.++.. .+.
T Consensus 368 ---------------~~~~~~TI~lrG~t~~~l~E~er~i~DAl~vv~~~i~~~~vVpGGGa~e~~ls~~L~~~~~~~~~ 432 (533)
T PTZ00212 368 ---------------AKGEACTIVLRGASTHILDEAERSLHDALCVLSQTVKDTRVVLGGGCSEMLMANAVEELAKKVEG 432 (533)
T ss_pred ---------------CCCCEEEEEEECCChhHHHHHHHHHHHHHHHHHHHhhCCCEeeCCCHHHHHHHHHHHHHHhhCCC
Confidence 257789999999999999999999999999999999997 999999999999999876532 122
Q ss_pred cccCCChhhHHHHHHHHHHHHHhhcChhHHHHHHHHHHHhccCeEEEEecccHHHHHHHHhcchHHHHHHHhCCchHHHH
Q psy14622 680 DQATGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSVEIVKKALRQPCMTIATNAGVDASVVV 759 (788)
Q Consensus 680 ~~~~G~~~~i~~r~~~l~~~~~~~~~~~d~~~l~eRla~Lsggvavi~vGa~~~e~~e~~~r~~~a~~a~~Aa~e~g~Vv 759 (788)
+++.| ++...++++.+.+++|.|||++...|+
T Consensus 433 ~~~~~------------------------------------------------i~~~a~aL~~ip~~La~NaG~d~~~vl 464 (533)
T PTZ00212 433 KKSLA------------------------------------------------IEAFAKALRQIPTIIADNGGYDSAELV 464 (533)
T ss_pred HHHHH------------------------------------------------HHHHHHHHHHHHHHHHHhCCCCHHHHH
Confidence 22222 889999999999999999999999999
Q ss_pred HHHhc----CCCCeeEEcCCCcccchhhcCC
Q psy14622 760 NKVLE----SSGEMGYDAMNNEYVNMIQKVL 786 (788)
Q Consensus 760 ~~~~~----~~~~~Gyda~~~~~~dm~~~Gi 786 (788)
.+++. ....+|||+.+|+|+||+++||
T Consensus 465 ~~l~~~h~~~~~~~G~d~~~g~i~d~~~~gI 495 (533)
T PTZ00212 465 SKLRAEHYKGNKTAGIDMEKGTVGDMKELGI 495 (533)
T ss_pred HHHHHHHHccCCccceeccCCcccchhhccc
Confidence 99973 3456899999999999999997
No 27
>TIGR02341 chap_CCT_beta T-complex protein 1, beta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT beta chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=1.3e-60 Score=545.29 Aligned_cols=418 Identities=23% Similarity=0.341 Sum_probs=337.3
Q ss_pred EeeccCCCCCcCCCCceeeeecCC--CCceEeeChHHhhccccccccccChhhHHHHHHhhhcccccCCCchhHHHHHHH
Q psy14622 6 LEQSWGSPKITKDDGRNVILEQSW--GSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARA 83 (788)
Q Consensus 6 i~~~~~S~kiLGPkG~nkmI~~~~--G~~~ITnDGvTIlk~I~l~d~~ehpgAkLl~e~A~~qd~evGDGTTTavVLA~a 83 (788)
|.+.++|+ |||+||||||+++. |+++|||||+||+++|+++ ||+|+|++++|.+||+++||||||++|||++
T Consensus 26 i~~~vktt--lGP~G~~KmI~~~~~~G~~~iTnDG~tIlk~l~i~----hP~akll~~~a~~qd~~~GDGTTtvvvLa~~ 99 (519)
T TIGR02341 26 IGDLVKST--LGPKGMDKILQSGSSESGIMVTNDGATILKSIGVD----NPAAKVLVDMSKVQDDEVGDGTTSVTVLAAE 99 (519)
T ss_pred HHHHHhcC--CCCCcCceEEeccCCCCCeEEeccHHHHHHHccCc----ChHHHHHHHHHHHhHhhhCCchhHHHHHHHH
Confidence 34678899 99999999999985 9999999999999999999 9999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhcCCCCCC-----HHHHHHHHHhccCCchHHhhHHHHHHHHhhhcc
Q psy14622 84 IAKEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVTT-----PEEIAQVATISANGDKAVGELISDAMKRVSAKV 158 (788)
Q Consensus 84 LL~eglklI~~Gi~P~~I~~Gi~~A~~~ile~L~~ls~~V~d-----~eeL~~VA~tSan~d~~Ig~LIadAv~kV~~~~ 158 (788)
|++++++++++|+||..|++||+.|.+.++++|+++++++.+ .++|.++|++|++++ +++..++++..+.
T Consensus 100 Ll~~a~~li~~gihp~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~L~~ia~t~l~sk--i~~~~~~~~s~l~--- 174 (519)
T TIGR02341 100 LLREAEKLVNQKIHPQTIISGYRRATKAAQEALKKSSIDNGSDKTKFRDDLLNIARTTLSSK--ILSQHKDHFAQLA--- 174 (519)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhcccccCcccccHHHHHHHHHHHhhhh--hhhhHHHHHHHHH---
Confidence 999999999999999999999999999999999999999853 578999999999853 5565666665420
Q ss_pred ccccceeeeccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhcccccccccccccccccCCCc
Q psy14622 159 EFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRFGPE 238 (788)
Q Consensus 159 e~~d~~ILite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~~~~~~ 238 (788)
T Consensus 175 -------------------------------------------------------------------------------- 174 (519)
T TIGR02341 175 -------------------------------------------------------------------------------- 174 (519)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccceeecccccccCcccccccccccccccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeeccccCCc
Q psy14622 239 VRGLMLQGVDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGE 318 (788)
Q Consensus 239 ~r~~~L~~~~i~~~~~~~tp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 318 (788)
T Consensus 175 -------------------------------------------------------------------------------- 174 (519)
T TIGR02341 175 -------------------------------------------------------------------------------- 174 (519)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceeeEeeecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccccCCCCCchhhhhhhhh
Q psy14622 319 ALSTLVVGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFIIELKLV 398 (788)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (788)
T Consensus 175 -------------------------------------------------------------------------------- 174 (519)
T TIGR02341 175 -------------------------------------------------------------------------------- 174 (519)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHhhhccCCCCcEEEecCCccceeEEEE--EeeEecccccccccccccC---CceeEeccceeecccccccc
Q psy14622 399 LEYYIQTYIYLCLKVGKEGVITVKDGKTLTDELEVI--EGMKFDRGYISPYFINTAK---GAKVEFQDALVLLSESKISS 473 (788)
Q Consensus 399 ~~~~~~~~~~~~~kvG~dGvItveeg~~~~~~lev~--eG~~fd~GylSpyfvt~~e---~~~v~l~~p~ILitD~kI~~ 473 (788)
.++++.++++... +.+.+. .|..|+.||++|||+.+.+ .|...++||+||++|.+|+.
T Consensus 175 ----------------~~av~~i~~~~~~-~~i~i~k~~G~s~~~s~l~~G~v~~~~~~~~~~~~~~n~~Ili~~~~Le~ 237 (519)
T TIGR02341 175 ----------------VDAVLRLKGSGNL-DAIQIIKKLGGSLNDSYLDEGFLLEKKIGVNQPKRIENAKILIANTPMDT 237 (519)
T ss_pred ----------------HHHHHHhccCCCh-hheEEEEccCCCcccceEEeeEEEeccCCCCCceeeccccEEEEecCCCC
Confidence 0000111111112 125555 5999999999999997776 67778999999999999974
Q ss_pred hh-------------hhHHHHHHHHhcCC---CeEEEecCCChhhHHhHHhhh---cccccceeeecCCCCcchhhhhhh
Q psy14622 474 IQ-------------SIIPALELANSKRK---PLVILAEDVDGEALSTLVVNR---LKIGLQVAAVKAPGFGDNRKATLQ 534 (788)
Q Consensus 474 i~-------------~IlP~Le~~~~~~r---pLLIIAedi~~eAL~~Lv~N~---~rg~~~v~AVkaP~fG~~R~~~Le 534 (788)
.+ +.++.++...+... +..|++.+++-.+++.++.|. .-....++|+|.|+++ .|+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~l~~~e~~~~~~~~~~I~~~g~~~v~~~~~I~~~~~~~l~~~~I~~v~~~~~~-----~l~ 312 (519)
T TIGR02341 238 DKVKVFGSRVRVDSTAKVAELEAAEKEKMKEKVEKILKHNINCFINRQLIYNYPEQLFADAGVMAIEHADFE-----GIE 312 (519)
T ss_pred CccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEECCcCCHHHHHHHHHCCcEEEecCCHH-----HHH
Confidence 22 13555554443332 556666666666666666555 4445688999999744 699
Q ss_pred hhHhhhCCeEeccCCCCCcccccCcccccceeEEEEecCceEEEcCCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHH
Q psy14622 535 DLAVATGGIVFGDEASPVKLEDLQATDLGSVGEIVITKDDTLILKGKGKKEDIDRRADQIRDQIEATTSDYEREKLQERL 614 (788)
Q Consensus 535 DiAilTGg~vis~~~~g~~l~~v~~~~LG~a~~V~vt~d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~~~~~~L~eRl 614 (788)
|||.+|||++++. +++++.++||+|++|.. ..+++ +|+
T Consensus 313 ~ia~~tGa~ii~~------~~~~~~~~lG~~~~v~~-----~~ig~-------------------------------~~~ 350 (519)
T TIGR02341 313 RLALVTGGEIVST------FDHPELVKLGSCDLIEE-----IMIGE-------------------------------DKL 350 (519)
T ss_pred HHHHHhCCEEecc------cccCCccccccCceEEE-----EEECC-------------------------------EEE
Confidence 9999999999983 56777888999999973 23332 455
Q ss_pred Hhhc----CCeEEEEecCCchhhHHHHHHHHHHHHHHHHHHHHh-ccccCCchhHhhHHHHhhhhhc-cCccccCCChhh
Q psy14622 615 ARLA----SGVAVLKVGGSSEVEVNEKKDRVTDALNATRAAVEE-GIVPGGGTALLRCIAVLDKLET-ANADQATGKKED 688 (788)
Q Consensus 615 a~Ls----ggvAvI~VGG~Te~EikErk~r~edAl~a~raA~e~-GiVpGGG~all~as~~L~~~~~-~~~~~~~G~~~~ 688 (788)
.+++ +++++|.+||+|+.+++|++++++||++++|+|+++ |+|||||+++++++..|.++.. .+.++..|
T Consensus 351 ~~~~~~~~~~~~TIllrG~t~~~l~E~er~i~Dal~~~~~~~~~~~vvpGGGa~e~~ls~~l~~~~~~~~~~~~~~---- 426 (519)
T TIGR02341 351 LKFSGVKLGEACTIVLRGATQQILDESERSLHDALCVLSQTVKESRTVLGGGCSEMLMSKAVAVEAQKVPGKEALA---- 426 (519)
T ss_pred EEEEcCCCCCEEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEEeCCCHHHHHHHHHHHHHhhcCCChHHHH----
Confidence 5665 478999999999999999999999999999999988 8999999999999999875422 12222222
Q ss_pred HHHHHHHHHHHHHhhcChhHHHHHHHHHHHhccCeEEEEecccHHHHHHHHhcchHHHHHHHhCCchHHHHHHHhc----
Q psy14622 689 IDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVLE---- 764 (788)
Q Consensus 689 i~~r~~~l~~~~~~~~~~~d~~~l~eRla~Lsggvavi~vGa~~~e~~e~~~r~~~a~~a~~Aa~e~g~Vv~~~~~---- 764 (788)
++...++++.+.+++|.|||++...|+.++.+
T Consensus 427 --------------------------------------------i~~~a~Ale~ip~~La~NaG~d~~~~l~~l~~~h~~ 462 (519)
T TIGR02341 427 --------------------------------------------VEAFARALRQLPTIIADNAGFDSAELVAQLRAAHYN 462 (519)
T ss_pred --------------------------------------------HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHc
Confidence 88999999999999999999999999999975
Q ss_pred CCCCeeEEcCCCcccchhhcCC
Q psy14622 765 SSGEMGYDAMNNEYVNMIQKVL 786 (788)
Q Consensus 765 ~~~~~Gyda~~~~~~dm~~~Gi 786 (788)
....+|||+.+|+++||++.||
T Consensus 463 ~~~~~Gid~~~g~i~d~~~~gI 484 (519)
T TIGR02341 463 GNHTMGLDMEEGEIADMRKLGI 484 (519)
T ss_pred CCCccceecCCCcccchhhccc
Confidence 2345899999999999999997
No 28
>cd03341 TCP1_theta TCP-1 (CTT or eukaryotic type II) chaperonin family, theta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=8.1e-59 Score=525.06 Aligned_cols=402 Identities=20% Similarity=0.288 Sum_probs=336.8
Q ss_pred EeeccCCCCCcCCCCceeeeecCCCCceEeeChHHhhccccccccccChhhHHHHHHhhhcccccCCCchhHHHHHHHHH
Q psy14622 6 LEQSWGSPKITKDDGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIA 85 (788)
Q Consensus 6 i~~~~~S~kiLGPkG~nkmI~~~~G~~~ITnDGvTIlk~I~l~d~~ehpgAkLl~e~A~~qd~evGDGTTTavVLA~aLL 85 (788)
+.+.++|+ |||+||||||+++.|+++|||||+||+++|+++ ||.|+|++++|.+||+++||||||+++|+++|+
T Consensus 20 l~~~v~tt--lGP~G~~kmi~~~~g~~~iTnDG~tIlk~l~~~----hP~a~ll~~~a~~~~~~~GDGTTt~vvL~~~Ll 93 (472)
T cd03341 20 LSQITRTS--YGPNGMNKMVINHLEKLFVTSDAATILRELEVQ----HPAAKLLVMASQMQEEEIGDGTNLVVVLAGELL 93 (472)
T ss_pred HHHHHhcC--cCCCCCceEEEcCCCCEEEeCcHHHHHHhcccc----CHHHHHHHHHHHHHhhhhCCChhhHHHHHHHHH
Confidence 34568889 999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhcCCC-CC---CHHHHHHHHHhccCCc-----hHHhhHHHHHHHHhhh
Q psy14622 86 KEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKP-VT---TPEEIAQVATISANGD-----KAVGELISDAMKRVSA 156 (788)
Q Consensus 86 ~eglklI~~Gi~P~~I~~Gi~~A~~~ile~L~~ls~~-V~---d~eeL~~VA~tSan~d-----~~Ig~LIadAv~kV~~ 156 (788)
+++.+++++|+||..|++||+.|.+.+++.|++++++ +. +.+.+.++++++++++ +.+++++++|+.++++
T Consensus 94 ~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~l~~l~~~a~~~~~~ 173 (472)
T cd03341 94 EKAEELLRMGLHPSEIIEGYEKALKKALEILEELVVYKIEDLRNKEEVSKALKTAIASKQYGNEDFLSPLVAEACISVLP 173 (472)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhccccCCccCHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999876 53 4667889999887664 5899999999998311
Q ss_pred ccccccceeeeccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhcccccccccccccccccCC
Q psy14622 157 KVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRFG 236 (788)
Q Consensus 157 ~~e~~d~~ILite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~~~~ 236 (788)
.- . |
T Consensus 174 ~~-----------------------------------------~-----------------------------------~ 177 (472)
T cd03341 174 EN-----------------------------------------I-----------------------------------G 177 (472)
T ss_pred cc-----------------------------------------C-----------------------------------C
Confidence 00 0 0
Q ss_pred CccccccccceeecccccccCcccccccccccccccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeeccccC
Q psy14622 237 PEVRGLMLQGVDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVD 316 (788)
Q Consensus 237 ~~~r~~~L~~~~i~~~~~~~tp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 316 (788)
...++.+
T Consensus 178 ----~~~~~~i--------------------------------------------------------------------- 184 (472)
T cd03341 178 ----NFNVDNI--------------------------------------------------------------------- 184 (472)
T ss_pred ----cCChhHe---------------------------------------------------------------------
Confidence 0000000
Q ss_pred CcceeeEeeecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccccCCCCCchhhhhhh
Q psy14622 317 GEALSTLVVGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFIIELK 396 (788)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (788)
T Consensus 185 -------------------------------------------------------------------------------- 184 (472)
T cd03341 185 -------------------------------------------------------------------------------- 184 (472)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhHHHHHHHHHHhhhccCCCCcEEEecCCccceeEEEEEeeEecccccccccccccCCceeEeccceeecccccccchhh
Q psy14622 397 LVLEYYIQTYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESKISSIQS 476 (788)
Q Consensus 397 ~~~~~~~~~~~~~~~kvG~dGvItveeg~~~~~~lev~eG~~fd~GylSpyfvt~~e~~~v~l~~p~ILitD~kI~~i~~ 476 (788)
.|.--.|...+++ ++++|+.|++. +..+...++||+|+++|.+|+.
T Consensus 185 ---------------------~i~ki~Gg~~~ds-~lv~Giv~~~~---------~~~~~~~~~n~~Ili~~~~Le~--- 230 (472)
T cd03341 185 ---------------------RVVKILGGSLEDS-KVVRGMVFKRE---------PEGSVKRVKKAKVAVFSCPFDI--- 230 (472)
T ss_pred ---------------------EEEEecCCCcccc-eEEeeEEEccc---------cCCCceeccCCcEEEEeccccC---
Confidence 0111135566665 89999999863 2233468899999999999887
Q ss_pred hHHHHHHHHhcCCCeEEEecCCChhhHHhHHhhhcccccceeeecCCCCcchhhhhhhhhHhhhCCeEeccCCCCCcccc
Q psy14622 477 IIPALELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATLQDLAVATGGIVFGDEASPVKLED 556 (788)
Q Consensus 477 IlP~Le~~~~~~rpLLIIAedi~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~~~LeDiAilTGg~vis~~~~g~~l~~ 556 (788)
+.||||++++|+++||..|. ..+++|||.|+ +..|+|||.+|||+++++ +++
T Consensus 231 -----------g~~lvi~~~~I~d~al~~l~------~~~I~av~~~~-----~~~Le~Ia~~tGa~ii~~------~~~ 282 (472)
T cd03341 231 -----------GVNVIVAGGSVGDLALHYCN------KYGIMVIKINS-----KFELRRLCRTVGATPLPR------LGA 282 (472)
T ss_pred -----------CCeEEEECCCCCHHHHHHHH------HCCeEEEEeCC-----HHHHHHHHHHhCCEEecc------ccc
Confidence 78999999999999999854 26789999997 445999999999999974 466
Q ss_pred cCcccccceeEEEEec---CceEEEcCCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHhhcCCeEEEEecCCchhh
Q psy14622 557 LQATDLGSVGEIVITK---DDTLILKGKGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSEVE 633 (788)
Q Consensus 557 v~~~~LG~a~~V~vt~---d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~~~~~~L~eRla~LsggvAvI~VGG~Te~E 633 (788)
++.++||+|++|.+.+ ++++++.+..+ .+++++|.+||+|+.+
T Consensus 283 l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~----------------------------------~~~~~TI~lrG~t~~~ 328 (472)
T cd03341 283 PTPEEIGYCDSVYVEEIGDTKVVVFRQNKE----------------------------------DSKIATIVLRGATQNI 328 (472)
T ss_pred CCHhHCCCceEEEEEEECCeeEEEEEccCC----------------------------------CCCeEEEEEECCCHHH
Confidence 7788999999999887 78888876532 1789999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhc-cccCCchhHhhHHHHhhhhhc-cCccccCCChhhHHHHHHHHHHHHHhhcChhHHHH
Q psy14622 634 VNEKKDRVTDALNATRAAVEEG-IVPGGGTALLRCIAVLDKLET-ANADQATGKKEDIDRRADQIRDQIEATTSDYEREK 711 (788)
Q Consensus 634 ikErk~r~edAl~a~raA~e~G-iVpGGG~all~as~~L~~~~~-~~~~~~~G~~~~i~~r~~~l~~~~~~~~~~~d~~~ 711 (788)
++|++++++||++++|+|+++| +|||||+++++++..|.++.. .+.++..|
T Consensus 329 l~E~er~i~DAl~~~~~ai~~~~vVpGGG~~e~~ls~~l~~~~~~~~~~~~~~--------------------------- 381 (472)
T cd03341 329 LDDVERAIDDGVNVFKSLTKDGRFVPGAGATEIELAKKLKEYGEKTPGLEQYA--------------------------- 381 (472)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCEEeCcCHHHHHHHHHHHHHhhccCCHHHHH---------------------------
Confidence 9999999999999999999999 999999999999999876421 12122222
Q ss_pred HHHHHHHhccCeEEEEecccHHHHHHHHhcchHHHHHHHhCCchHHHHHHHhc---C-CCCeeEEcCCC--cccchhhcC
Q psy14622 712 LQERLARLASGVAVLKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVLE---S-SGEMGYDAMNN--EYVNMIQKV 785 (788)
Q Consensus 712 l~eRla~Lsggvavi~vGa~~~e~~e~~~r~~~a~~a~~Aa~e~g~Vv~~~~~---~-~~~~Gyda~~~--~~~dm~~~G 785 (788)
++...++++.+.+++|.|||++...|+.+++. . ...+|||+.+| +|+||+++|
T Consensus 382 ---------------------~~~~a~al~~ip~~L~~NaG~d~~~~~~~l~~~h~~~~~~~Gid~~~g~~~~~d~~~~g 440 (472)
T cd03341 382 ---------------------IKKFAEAFEVVPRTLAENAGLDATEVLSELYAAHQKGNKSAGVDIESGDEGTKDAKEAG 440 (472)
T ss_pred ---------------------HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHccCCeeeeeccCCCCCccChhhcc
Confidence 89999999999999999999999999999863 2 34689999999 999999999
Q ss_pred C
Q psy14622 786 L 786 (788)
Q Consensus 786 i 786 (788)
|
T Consensus 441 I 441 (472)
T cd03341 441 I 441 (472)
T ss_pred c
Confidence 7
No 29
>cd03336 TCP1_beta TCP-1 (CTT or eukaryotic type II) chaperonin family, beta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=4.2e-60 Score=540.90 Aligned_cols=407 Identities=21% Similarity=0.311 Sum_probs=332.0
Q ss_pred EeeccCCCCCcCCCCceeeeecC--CCCceEeeChHHhhccccccccccChhhHHHHHHhhhcccccCCCchhHHHHHHH
Q psy14622 6 LEQSWGSPKITKDDGRNVILEQS--WGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARA 83 (788)
Q Consensus 6 i~~~~~S~kiLGPkG~nkmI~~~--~G~~~ITnDGvTIlk~I~l~d~~ehpgAkLl~e~A~~qd~evGDGTTTavVLA~a 83 (788)
+.+.++|+ |||+||||||+++ +|+++|||||+||+++|+++ ||+|+|++++|.+||+++||||||+++||++
T Consensus 25 i~~~v~ts--lGP~G~~Kmi~~~~~~g~~~iTnDG~tIlk~l~~~----hP~akll~~~a~~qd~~~GDGTTtvvvLa~~ 98 (517)
T cd03336 25 IGDLVKTT--LGPKGMDKILQSVGRSGGVTVTNDGATILKSIGVD----NPAAKVLVDISKVQDDEVGDGTTSVTVLAAE 98 (517)
T ss_pred HHHHHhcC--CCCCcCceEeecCCCCCCeEEeccHHHHHHHccCc----ChHHHHHHHHHHHHHhHhCCChhHHHHHHHH
Confidence 34678899 9999999999998 59999999999999999999 9999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhcCCCCC-----CHHHHHHHHHhccCCc------hHHhhHHHHHHH
Q psy14622 84 IAKEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVT-----TPEEIAQVATISANGD------KAVGELISDAMK 152 (788)
Q Consensus 84 LL~eglklI~~Gi~P~~I~~Gi~~A~~~ile~L~~ls~~V~-----d~eeL~~VA~tSan~d------~~Ig~LIadAv~ 152 (788)
|++++++++++|+||..|++||++|.+.+++.|++++++++ +.+.|.++|+|+++++ +.|++++++|+.
T Consensus 99 Ll~~a~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~l~~ia~t~lssk~~~~~~~~l~~l~~~A~~ 178 (517)
T cd03336 99 LLREAEKLVAQKIHPQTIIEGYRMATAAAREALLSSAVDHSSDEEAFREDLLNIARTTLSSKILTQDKEHFAELAVDAVL 178 (517)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccCcccccchhHHHHHHHHHhhccccccchhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999984 3578999999888875 679999999998
Q ss_pred HhhhccccccceeeeccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhccccccccccccccc
Q psy14622 153 RVSAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKD 232 (788)
Q Consensus 153 kV~~~~e~~d~~ILite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~ 232 (788)
++.+
T Consensus 179 ~v~~---------------------------------------------------------------------------- 182 (517)
T cd03336 179 RLKG---------------------------------------------------------------------------- 182 (517)
T ss_pred Hhhc----------------------------------------------------------------------------
Confidence 7200
Q ss_pred ccCCCccccccccceeecccccccCcccccccccccccccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeec
Q psy14622 233 VRFGPEVRGLMLQGVDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILA 312 (788)
Q Consensus 233 ~~~~~~~r~~~L~~~~i~~~~~~~tp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (788)
T Consensus 183 -------------------------------------------------------------------------------- 182 (517)
T cd03336 183 -------------------------------------------------------------------------------- 182 (517)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCCcceeeEeeecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccccCCCCCchhh
Q psy14622 313 EDVDGEALSTLVVGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFI 392 (788)
Q Consensus 313 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (788)
T Consensus 183 -------------------------------------------------------------------------------- 182 (517)
T cd03336 183 -------------------------------------------------------------------------------- 182 (517)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhhhHHHHHHHHHHhhhccCCCCcEEEecCCccc-eeEEEEEeeEecccccccccccccCC---ceeEeccceeeccc
Q psy14622 393 IELKLVLEYYIQTYIYLCLKVGKEGVITVKDGKTLT-DELEVIEGMKFDRGYISPYFINTAKG---AKVEFQDALVLLSE 468 (788)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~kvG~dGvItveeg~~~~-~~lev~eG~~fd~GylSpyfvt~~e~---~~v~l~~p~ILitD 468 (788)
+...+ ..+.-+.|..|+.+|++|||+.+... |...++||+||++|
T Consensus 183 -------------------------------~~~~~~i~i~ki~G~s~~ds~l~~G~v~~~~~~~~~~~~~~n~kIli~~ 231 (517)
T cd03336 183 -------------------------------SGNLDAIQIIKKLGGSLKDSYLDEGFLLDKKIGVNQPKRIENAKILIAN 231 (517)
T ss_pred -------------------------------cCCccceeEEEccCCCccceEEEeeEEEecccCCCCCCeeccccEEEEe
Confidence 00001 13445568888888888888876543 36689999999999
Q ss_pred cccc--------------chhhhHHH-----------HHHHHhcCCCeEEEecCCChhhHHhHHhhhcccccceeeecCC
Q psy14622 469 SKIS--------------SIQSIIPA-----------LELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAP 523 (788)
Q Consensus 469 ~kI~--------------~i~~IlP~-----------Le~~~~~~rpLLIIAedi~~eAL~~Lv~N~~rg~~~v~AVkaP 523 (788)
.+|+ +++++.++ .+.+.+.+-.+++....|++.++..|.-+ +++|||.|
T Consensus 232 ~~le~~~~~~~~~~~~~~~~~~~~~l~~~E~~~~~~~v~~I~~~gv~~v~~~~~I~~~~~~~l~~~------~I~av~~v 305 (517)
T cd03336 232 TPMDTDKIKIFGAKVRVDSTAKVAEIEEAEKEKMKNKVEKILKHGINCFINRQLIYNYPEQLFADA------GIMAIEHA 305 (517)
T ss_pred cCCCcccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEeCCCccHHHHHHHHHC------CcEEEecC
Confidence 9876 55666433 22222334344444556666666555443 67999999
Q ss_pred CCcchhhhhhhhhHhhhCCeEeccCCCCCcccccCcccccceeEEEEecCceEEEcCCCCHHHHHHHHHHHHHHHHhcCC
Q psy14622 524 GFGDNRKATLQDLAVATGGIVFGDEASPVKLEDLQATDLGSVGEIVITKDDTLILKGKGKKEDIDRRADQIRDQIEATTS 603 (788)
Q Consensus 524 ~fG~~R~~~LeDiAilTGg~vis~~~~g~~l~~v~~~~LG~a~~V~vt~d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s 603 (788)
++.+ |+|||.+|||++++ ++++++.+.||+|++|.. ..+++
T Consensus 306 ~~~~-----L~rIa~~tGa~ii~------~l~~~~~~~LG~~~~v~~-----~~ig~----------------------- 346 (517)
T cd03336 306 DFDG-----VERLALVTGGEIAS------TFDHPELVKLGTCKLIEE-----IMIGE----------------------- 346 (517)
T ss_pred CHHH-----HHHHHHHhCCEEec------ccCCCCcccccccceEEE-----EEECC-----------------------
Confidence 7543 99999999999997 357778888999999973 22321
Q ss_pred hHHHHHHHHHHHhhc----CCeEEEEecCCchhhHHHHHHHHHHHHHHHHHHHHhc-cccCCchhHhhHHHHhhhhhc-c
Q psy14622 604 DYEREKLQERLARLA----SGVAVLKVGGSSEVEVNEKKDRVTDALNATRAAVEEG-IVPGGGTALLRCIAVLDKLET-A 677 (788)
Q Consensus 604 ~~~~~~L~eRla~Ls----ggvAvI~VGG~Te~EikErk~r~edAl~a~raA~e~G-iVpGGG~all~as~~L~~~~~-~ 677 (788)
+|+.+|+ +++++|.+||+|+.+++|.+.+++||++++|+|+++| +|||||+++++++..|.++.. .
T Consensus 347 --------~~~~~~~~~~~~~~~TI~lrG~t~~~l~E~er~i~Dal~~~~~~i~~~~vvpGGGa~e~~ls~~l~~~~~~~ 418 (517)
T cd03336 347 --------DKLIRFSGVAAGEACTIVLRGASQQILDEAERSLHDALCVLAQTVKDTRVVLGGGCSEMLMAKAVEELAKKT 418 (517)
T ss_pred --------eEEEEEEccCCCceEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEEeCCCHHHHHHHHHHHHHhhhC
Confidence 3445555 4789999999999999999999999999999999997 999999999999999876421 1
Q ss_pred CccccCCChhhHHHHHHHHHHHHHhhcChhHHHHHHHHHHHhccCeEEEEecccHHHHHHHHhcchHHHHHHHhCCchHH
Q psy14622 678 NADQATGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSVEIVKKALRQPCMTIATNAGVDASV 757 (788)
Q Consensus 678 ~~~~~~G~~~~i~~r~~~l~~~~~~~~~~~d~~~l~eRla~Lsggvavi~vGa~~~e~~e~~~r~~~a~~a~~Aa~e~g~ 757 (788)
+.+++.| ++...++++.+.+++|.|||+++..
T Consensus 419 ~~~~~~~------------------------------------------------i~~~a~ALe~ip~~La~NaG~d~~~ 450 (517)
T cd03336 419 PGKKSLA------------------------------------------------IEAFAKALRQLPTIIADNAGYDSAE 450 (517)
T ss_pred CCHHHHH------------------------------------------------HHHHHHHHHHHHHHHHHhCCCCHHH
Confidence 2222222 7899999999999999999999999
Q ss_pred HHHHHhc----CCCCeeEEcCCCcccchhhcCC
Q psy14622 758 VVNKVLE----SSGEMGYDAMNNEYVNMIQKVL 786 (788)
Q Consensus 758 Vv~~~~~----~~~~~Gyda~~~~~~dm~~~Gi 786 (788)
|+.++.+ ...++|||+.+|+|+||++.||
T Consensus 451 ~l~~l~~~h~~~~~~~Gid~~~g~~~d~~~~gI 483 (517)
T cd03336 451 LVAQLRAAHYNGNTTAGLDMRKGTVGDMKELGI 483 (517)
T ss_pred HHHHHHHHHHcCCCceeeecCCCCccchhhcCc
Confidence 9999875 2456899999999999999997
No 30
>cd00309 chaperonin_type_I_II chaperonin families, type I and type II. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings, each composed of 7-9 subunits. There are 2 main chaperonin groups. The symmetry of type I is seven-fold and they are found in eubacteria (GroEL) and in organelles of eubacterial descent (hsp60 and RBP). The symmetry of type II is eight- or nine-fold and they are found in archea (thermosome), thermophilic bacteria (TF55) and in the eukaryotic cytosol (CTT). Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis.
Probab=100.00 E-value=3.8e-58 Score=517.80 Aligned_cols=396 Identities=39% Similarity=0.561 Sum_probs=336.1
Q ss_pred EeeccCCCCCcCCCCceeeeecCCCCceEeeChHHhhccccccccccChhhHHHHHHhhhcccccCCCchhHHHHHHHHH
Q psy14622 6 LEQSWGSPKITKDDGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIA 85 (788)
Q Consensus 6 i~~~~~S~kiLGPkG~nkmI~~~~G~~~ITnDGvTIlk~I~l~d~~ehpgAkLl~e~A~~qd~evGDGTTTavVLA~aLL 85 (788)
+.+.++|+ |||+||+|||+++.|+++|||||+||+++|+++ ||+|+|++++|++||+++||||||+++||++|+
T Consensus 20 l~~~v~ts--lGP~G~~k~i~~~~g~~~iTnDG~tIlk~i~~~----hp~a~ll~~~~~~~~~~~GDGTtt~viL~~~ll 93 (464)
T cd00309 20 LADAVKTT--LGPKGMDKMLVDSLGDPTITNDGATILKEIEVE----HPAAKLLVEVAKSQDDEVGDGTTTVVVLAGELL 93 (464)
T ss_pred HHHHHhcc--cCCCcCcEEEEcCCCCeEEEccHHHHHHhccCc----CHHHHHHHHHHHHHHhHhCCchhHHHHHHHHHH
Confidence 34678899 999999999999999999999999999999997 999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhcCCC--CCCHHHHHHHHHhccCC------chHHhhHHHHHHHHhhhc
Q psy14622 86 KEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKP--VTTPEEIAQVATISANG------DKAVGELISDAMKRVSAK 157 (788)
Q Consensus 86 ~eglklI~~Gi~P~~I~~Gi~~A~~~ile~L~~ls~~--V~d~eeL~~VA~tSan~------d~~Ig~LIadAv~kV~~~ 157 (788)
+++++++++|+||..|++||+.|.+.+++.|++++++ +.+.+++.++|++|+++ ++.+++++++|+.++++.
T Consensus 94 ~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~~~~l~~ia~tsl~sK~~~~~~~~l~~l~~~Ai~~v~~~ 173 (464)
T cd00309 94 KEAEKLLAAGIHPTEIIRGYEKAVEKALEILKEIAVPIDVEDREELLKVATTSLNSKLVSGGDDFLGELVVDAVLKVGKE 173 (464)
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCccCCCCHHHHHHHhHhcccccccccchHHHHHHHHHHHHHhccc
Confidence 9999999999999999999999999999999999999 66889999999999994 578999999999983110
Q ss_pred cccccceeeeccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhcccccccccccccccccCCC
Q psy14622 158 VEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRFGP 237 (788)
Q Consensus 158 ~e~~d~~ILite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~~~~~ 237 (788)
-
T Consensus 174 ~------------------------------------------------------------------------------- 174 (464)
T cd00309 174 N------------------------------------------------------------------------------- 174 (464)
T ss_pred c-------------------------------------------------------------------------------
Confidence 0
Q ss_pred ccccccccceeecccccccCcccccccccccccccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeeccccCC
Q psy14622 238 EVRGLMLQGVDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDG 317 (788)
Q Consensus 238 ~~r~~~L~~~~i~~~~~~~tp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 317 (788)
+ .
T Consensus 175 --~-----------------------------------------------------~----------------------- 176 (464)
T cd00309 175 --G-----------------------------------------------------D----------------------- 176 (464)
T ss_pred --C-----------------------------------------------------c-----------------------
Confidence 0 0
Q ss_pred cceeeEeeecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccccCCCCCchhhhhhhh
Q psy14622 318 EALSTLVVGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFIIELKL 397 (788)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (788)
T Consensus 177 -------------------------------------------------------------------------------- 176 (464)
T cd00309 177 -------------------------------------------------------------------------------- 176 (464)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHHHHHHHHHhhhccCCCCcEEEecCCc--cceeEEEEEeeEecccccccccccccCCceeEeccceeecccccccchh
Q psy14622 398 VLEYYIQTYIYLCLKVGKEGVITVKDGKT--LTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESKISSIQ 475 (788)
Q Consensus 398 ~~~~~~~~~~~~~~kvG~dGvItveeg~~--~~~~lev~eG~~fd~GylSpyfvt~~e~~~v~l~~p~ILitD~kI~~i~ 475 (788)
. ..+.|.++...+ .. +-.+..|+.|++||.+||| ...++||+||++|.+|+.
T Consensus 177 ---------------~-~~~~I~i~k~~gg~~~-ds~li~Gi~~~~~~~~~~m-------~~~~~n~~Ili~~~~Le~-- 230 (464)
T cd00309 177 ---------------V-DLGVIRVEKKKGGSLE-DSELVVGMVFDKGYLSPYM-------PKRLENAKILLLDCKLEY-- 230 (464)
T ss_pred ---------------c-ccceEEEEecCCCCcc-cceeeeeEEEecCCCCCCC-------ceeecCceEEEEecCcce--
Confidence 0 022344433322 22 2345669999999999999 457899999999999887
Q ss_pred hhHHHHHHHHhcCCCeEEEecC-CChhhHHhHHhhhcccccceeeecCCCCcchhhhhhhhhHhhhCCeEeccCCCCCcc
Q psy14622 476 SIIPALELANSKRKPLVILAED-VDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATLQDLAVATGGIVFGDEASPVKL 554 (788)
Q Consensus 476 ~IlP~Le~~~~~~rpLLIIAed-i~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~~~LeDiAilTGg~vis~~~~g~~l 554 (788)
|||+++ |+++||..|.. .++++|+.. ++..|+|||.+||+++++. +
T Consensus 231 ----------------lIi~~~~I~~~al~~L~~------~~I~~v~~~-----~~~~L~~Ia~~tGa~ii~~------~ 277 (464)
T cd00309 231 ----------------VVIAEKGIDDEALHYLAK------LGIMAVRRV-----RKEDLERIAKATGATIVSR------L 277 (464)
T ss_pred ----------------EEecCCCcCHHHHHHHHH------CCeEEEEeC-----CHHHHHHHHHHhCCEEecc------c
Confidence 888886 99999999987 466888874 6888999999999999974 4
Q ss_pred cccCcccccceeEEEEec---CceEEEcCCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHhhcCCeEEEEecCCch
Q psy14622 555 EDLQATDLGSVGEIVITK---DDTLILKGKGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSE 631 (788)
Q Consensus 555 ~~v~~~~LG~a~~V~vt~---d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~~~~~~L~eRla~LsggvAvI~VGG~Te 631 (788)
++++.++||+|++|.+.+ ++++++.+... +++++|.++|+|+
T Consensus 278 ~~~~~~~lG~~~~v~~~~~g~~~~~~~~~~~~-----------------------------------~~~~TIllrG~t~ 322 (464)
T cd00309 278 EDLTPEDLGTAGLVEETKIGDEKYTFIEGCKG-----------------------------------GKVATILLRGATE 322 (464)
T ss_pred ccCCcccCccccEEEEEEEcCeeEEEEEecCC-----------------------------------CCEEEEEEeCCcH
Confidence 667788999999998877 23344443222 6789999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHh-ccccCCchhHhhHHHHhhhhhcc-CccccCCChhhHHHHHHHHHHHHHhhcChhHH
Q psy14622 632 VEVNEKKDRVTDALNATRAAVEE-GIVPGGGTALLRCIAVLDKLETA-NADQATGKKEDIDRRADQIRDQIEATTSDYER 709 (788)
Q Consensus 632 ~EikErk~r~edAl~a~raA~e~-GiVpGGG~all~as~~L~~~~~~-~~~~~~G~~~~i~~r~~~l~~~~~~~~~~~d~ 709 (788)
.+++|++++++||++++|+++++ |+|||||+++++++..|.+.... +.++..|
T Consensus 323 ~~l~e~~r~i~dal~~~~~~~~~~~~vpGGGa~E~~ls~~L~~~~~~~~~~~~~~------------------------- 377 (464)
T cd00309 323 VELDEAERSLHDALCAVRAAVEDGGIVPGGGAAEIELSKALEELAKTLPGKEQLG------------------------- 377 (464)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCcccCCcHHHHHHHHHHHHHhcccchHHHHH-------------------------
Confidence 99999999999999999999999 89999999999999998765321 2222222
Q ss_pred HHHHHHHHHhccCeEEEEecccHHHHHHHHhcchHHHHHHHhCCchHHHHHHHhcC----CCCeeEEcCCCcccchhhcC
Q psy14622 710 EKLQERLARLASGVAVLKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVLES----SGEMGYDAMNNEYVNMIQKV 785 (788)
Q Consensus 710 ~~l~eRla~Lsggvavi~vGa~~~e~~e~~~r~~~a~~a~~Aa~e~g~Vv~~~~~~----~~~~Gyda~~~~~~dm~~~G 785 (788)
+++..++++.+.++++.|||+++..|+.+++.. ...+|+|..+++|+||++.|
T Consensus 378 -----------------------~~~~a~aL~~ip~~L~~NaG~d~~~~~~~l~~~~~~~~~~~g~d~~~~~~~d~~~~g 434 (464)
T cd00309 378 -----------------------IEAFADALEVIPRTLAENAGLDPIEVVTKLRAKHAEGGGNAGGDVETGEIVDMKEAG 434 (464)
T ss_pred -----------------------HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhccCCCeeEECCCCcEeehhhcc
Confidence 899999999999999999999999999999753 23579999999999999999
Q ss_pred C
Q psy14622 786 L 786 (788)
Q Consensus 786 i 786 (788)
|
T Consensus 435 I 435 (464)
T cd00309 435 I 435 (464)
T ss_pred C
Confidence 7
No 31
>TIGR02344 chap_CCT_gamma T-complex protein 1, gamma subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT gamma chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=100.00 E-value=1.3e-57 Score=521.06 Aligned_cols=418 Identities=20% Similarity=0.288 Sum_probs=343.4
Q ss_pred EeeccCCCCCcCCCCceeeeecCCCCceEeeChHHhhccccccccccChhhHHHHHHhhhcccccCCCchhHHHHHHHHH
Q psy14622 6 LEQSWGSPKITKDDGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIA 85 (788)
Q Consensus 6 i~~~~~S~kiLGPkG~nkmI~~~~G~~~ITnDGvTIlk~I~l~d~~ehpgAkLl~e~A~~qd~evGDGTTTavVLA~aLL 85 (788)
+.+.++|+ |||+||||||+++.|+++|||||+||+++|+++ ||.|+|++++|.+||+++||||||+++||++|+
T Consensus 28 l~~~v~tt--lGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~----hP~akll~~~a~~q~~~~GDGTtt~viLa~~Ll 101 (525)
T TIGR02344 28 VADIIRTT--LGPRAMLKMLLDPMGGIVMTNDGNAILREIDVA----HPAAKSMIELSRTQDEEVGDGTTSVIILAGEML 101 (525)
T ss_pred HHHHHhcc--cCCCCCCceEEcCCCCEEEEccHHHHHHhccCC----CHHHHHHHHHHHhhhhhccCCcchhHHHHHHHH
Confidence 34668899 999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhcCCCCC--CHHHHHHHHHhccCCc------hHHhhHHHHHHHHhhhc
Q psy14622 86 KEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVT--TPEEIAQVATISANGD------KAVGELISDAMKRVSAK 157 (788)
Q Consensus 86 ~eglklI~~Gi~P~~I~~Gi~~A~~~ile~L~~ls~~V~--d~eeL~~VA~tSan~d------~~Ig~LIadAv~kV~~~ 157 (788)
+++.+++++|+||..|++||+.|.+.+++.|++++++++ +.+.+.++|+++++++ +.|++++++|+..+++.
T Consensus 102 ~~a~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~~ls~l~~~Ai~~v~~~ 181 (525)
T TIGR02344 102 SVAEPFLEQNIHPTIIIRAYKKALDDALSVLEEISIPVDVNDDAAMLKLIQSCIGTKFVSRWSDLMCDLALDAVRTVKRD 181 (525)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccccCCCCHHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHhhcc
Confidence 999999999999999999999999999999999999986 6778999999998874 68999999999983110
Q ss_pred cccccceeeeccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhcccccccccccccccccCCC
Q psy14622 158 VEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRFGP 237 (788)
Q Consensus 158 ~e~~d~~ILite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~~~~~ 237 (788)
- ++
T Consensus 182 ~-----------------------------------------------------------------------------~~ 184 (525)
T TIGR02344 182 L-----------------------------------------------------------------------------GN 184 (525)
T ss_pred c-----------------------------------------------------------------------------cC
Confidence 0 00
Q ss_pred ccccccccceeecccccccCcccccccccccccccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeeccccCC
Q psy14622 238 EVRGLMLQGVDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDG 317 (788)
Q Consensus 238 ~~r~~~L~~~~i~~~~~~~tp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 317 (788)
.+ ..
T Consensus 185 -~~----~~----------------------------------------------------------------------- 188 (525)
T TIGR02344 185 -GR----KE----------------------------------------------------------------------- 188 (525)
T ss_pred -CC----Cc-----------------------------------------------------------------------
Confidence 00 00
Q ss_pred cceeeEeeecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccccCCCCCchhhhhhhh
Q psy14622 318 EALSTLVVGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFIIELKL 397 (788)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (788)
T Consensus 189 -------------------------------------------------------------------------------- 188 (525)
T TIGR02344 189 -------------------------------------------------------------------------------- 188 (525)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHHHHHHHHHhhhccCCCCcEEEec--CCccceeEEEEEeeEecccccccccccccCCceeEeccceeecccccccc--
Q psy14622 398 VLEYYIQTYIYLCLKVGKEGVITVKD--GKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESKISS-- 473 (788)
Q Consensus 398 ~~~~~~~~~~~~~~kvG~dGvItvee--g~~~~~~lev~eG~~fd~GylSpyfvt~~e~~~v~l~~p~ILitD~kI~~-- 473 (788)
+..+-.|.++. |....| .++++|+-|+++...+ +|...++||+||++|.+|+.
T Consensus 189 ---------------~d~~~~I~i~ki~Gg~~~d-S~lv~Gvvi~k~~~~~-------~m~~~~~n~kIlll~~~Le~~~ 245 (525)
T TIGR02344 189 ---------------IDIKRYAKVEKIPGGDIED-SCVLKGVMINKDVTHP-------KMRRYIENPRIVLLDCPLEYKK 245 (525)
T ss_pred ---------------cChhhceEEEEecCCChHh-cCcccceEEecccCCC-------CCccccCCCCEEEEeccccccc
Confidence 00011122222 555555 6789999999985532 56678899999999999975
Q ss_pred -----------hhhhHHHHH-----------HHHhcCCCeEEEec-CCChhhHHhHHhhhcccccceeeecCCCCcchhh
Q psy14622 474 -----------IQSIIPALE-----------LANSKRKPLVILAE-DVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRK 530 (788)
Q Consensus 474 -----------i~~IlP~Le-----------~~~~~~rpLLIIAe-di~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~ 530 (788)
.+++.|+++ .+.+ .+|.|||++ .|++.++..|. . ..++|++ ..++
T Consensus 246 ~~~~~~i~i~~~~~~~~~l~~E~~~l~~~v~~i~~-~~~~vIi~~k~I~dla~~~l~-----~-~~I~av~-----~v~~ 313 (525)
T TIGR02344 246 GESQTNVEIMKEEDWNRILQMEEEYVQLMCEDIIA-VKPDLVITEKGVSDLAQHYLL-----K-ANISAIR-----RVRK 313 (525)
T ss_pred ccccceEEeCCHHHHHHHHHHHHHHHHHHHHHHHh-cCCCEEEeCCCccHHHHHHHh-----H-CCceEEe-----cCCH
Confidence 478888887 3334 679999985 66665555444 3 5567764 5578
Q ss_pred hhhhhhHhhhCCeEeccCCCCCcccccCcccccc-eeEEEE---ecCceEEEcCCCCHHHHHHHHHHHHHHHHhcCChHH
Q psy14622 531 ATLQDLAVATGGIVFGDEASPVKLEDLQATDLGS-VGEIVI---TKDDTLILKGKGKKEDIDRRADQIRDQIEATTSDYE 606 (788)
Q Consensus 531 ~~LeDiAilTGg~vis~~~~g~~l~~v~~~~LG~-a~~V~v---t~d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~~~ 606 (788)
..|+|||.+|||++++. +++++.++||+ |+.+.+ +.+++++++|.+++.
T Consensus 314 ~~LerIa~~tGa~ii~~------l~~l~~~~lG~~~~~v~~~~ig~~~~~~~~g~~~~~--------------------- 366 (525)
T TIGR02344 314 TDNNRIARACGATIVNR------PEELRESDVGTGCGLFEVKKIGDEYFTFFTECKDPK--------------------- 366 (525)
T ss_pred HHHHHHHHHhCCeEecc------hhhCCHhhcCCcCCEEEEEEECCeEEEEEEcCCCCC---------------------
Confidence 89999999999999973 56777889999 988877 557888888765543
Q ss_pred HHHHHHHHHhhcCCeEEEEecCCchhhHHHHHHHHHHHHHHHHHHHHh-ccccCCchhHhhHHHHhhhhhc-cCccccCC
Q psy14622 607 REKLQERLARLASGVAVLKVGGSSEVEVNEKKDRVTDALNATRAAVEE-GIVPGGGTALLRCIAVLDKLET-ANADQATG 684 (788)
Q Consensus 607 ~~~L~eRla~LsggvAvI~VGG~Te~EikErk~r~edAl~a~raA~e~-GiVpGGG~all~as~~L~~~~~-~~~~~~~G 684 (788)
+++|.++|+|+.+++|.+..++||++++|+|+++ |+|||||+++++++..|+++.. .+.+++.|
T Consensus 367 --------------~~TIlLrG~t~~~l~E~er~l~DAl~~vk~~~~~~~vvpGGGa~e~~ls~~l~~~~~~~~~~~~~~ 432 (525)
T TIGR02344 367 --------------ACTILLRGASKDVLNEIERNLQDAMAVARNVLLEPKLLPGGGATEMAVSVYLAKKASKLEGVQQWP 432 (525)
T ss_pred --------------EEEEEEEcCCHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHHHHhcCCCHHHHH
Confidence 6999999999999999999999999999999988 7999999999999999876422 12222222
Q ss_pred ChhhHHHHHHHHHHHHHhhcChhHHHHHHHHHHHhccCeEEEEecccHHHHHHHHhcchHHHHHHHhCCchHHHHHHHhc
Q psy14622 685 KKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVLE 764 (788)
Q Consensus 685 ~~~~i~~r~~~l~~~~~~~~~~~d~~~l~eRla~Lsggvavi~vGa~~~e~~e~~~r~~~a~~a~~Aa~e~g~Vv~~~~~ 764 (788)
++...++++.+.+++|.|||++.-.|+.++..
T Consensus 433 ------------------------------------------------~~~~a~al~~ip~~La~NaG~d~~~~l~~l~~ 464 (525)
T TIGR02344 433 ------------------------------------------------YRAVADALEIIPRTLAQNCGVNVIRTLTELRA 464 (525)
T ss_pred ------------------------------------------------HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 88999999999999999999999999999975
Q ss_pred C-----CCCeeEEcCCCcccchhhcCC
Q psy14622 765 S-----SGEMGYDAMNNEYVNMIQKVL 786 (788)
Q Consensus 765 ~-----~~~~Gyda~~~~~~dm~~~Gi 786 (788)
. ..++|||+.+|+++||++.||
T Consensus 465 ~h~~~~~~~~Gid~~~g~~~d~~~~gV 491 (525)
T TIGR02344 465 KHAQEGNCTWGIDGETGKIVDMKEKGI 491 (525)
T ss_pred HHHccCCCeEeEECCCCccccchhccc
Confidence 1 346899999999999999997
No 32
>cd03340 TCP1_eta TCP-1 (CTT or eukaryotic type II) chaperonin family, eta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=3.1e-57 Score=517.70 Aligned_cols=416 Identities=22% Similarity=0.327 Sum_probs=343.3
Q ss_pred EeeccCCCCCcCCCCceeeeecCCCCceEeeChHHhhccccccccccChhhHHHHHHhhhcccccCCCchhHHHHHHHHH
Q psy14622 6 LEQSWGSPKITKDDGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIA 85 (788)
Q Consensus 6 i~~~~~S~kiLGPkG~nkmI~~~~G~~~ITnDGvTIlk~I~l~d~~ehpgAkLl~e~A~~qd~evGDGTTTavVLA~aLL 85 (788)
|.+.++|+ |||+||||||+++.|+++|||||+||+++|+++ ||.|+|++++|.+|++++||||||+++||++|+
T Consensus 28 i~~~v~ts--lGP~G~~kmi~~~~g~~~iTnDG~tIlk~l~~~----hP~akll~~~a~~q~~~~GDGTtt~viL~~~ll 101 (522)
T cd03340 28 IADAVRTT--LGPRGMDKLIVDGRGKVTISNDGATILKLLDIV----HPAAKTLVDIAKSQDAEVGDGTTSVVVLAGEFL 101 (522)
T ss_pred HHHHHhcC--CCCCcCceEEEcCCCCEEEeccHHHHHHHcccc----CHHHHHHHHHHHHhHhHhCCChhHHHHHHHHHH
Confidence 34678899 999999999999999999999999999999998 999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhcCCCCCC------HHHHHHHHHhccCCc------hHHhhHHHHHHHH
Q psy14622 86 KEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVTT------PEEIAQVATISANGD------KAVGELISDAMKR 153 (788)
Q Consensus 86 ~eglklI~~Gi~P~~I~~Gi~~A~~~ile~L~~ls~~V~d------~eeL~~VA~tSan~d------~~Ig~LIadAv~k 153 (788)
+++.++++.|+||+.|++||++|.+.+++.|+++++++++ .+.+.++|++|++++ ++|++++++|+.+
T Consensus 102 ~~~~~li~~gi~p~~Ii~g~~~a~~~~~~~L~~~s~~~~~~~~~~~~~~l~~ia~t~l~sK~~~~~~~~l~~l~~~A~~~ 181 (522)
T cd03340 102 KEAKPFIEDGVHPQIIIRGYRKALQLAIEKIKEIAVNIDKEDKEEQRELLEKCAATALNSKLIASEKEFFAKMVVDAVLS 181 (522)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhcccCcccccccHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999864 567999999999864 6899999999998
Q ss_pred hhhccccccceeeeccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhcccccccccccccccc
Q psy14622 154 VSAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDV 233 (788)
Q Consensus 154 V~~~~e~~d~~ILite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~ 233 (788)
+++ .+|
T Consensus 182 v~~-----------------------------------------~~~--------------------------------- 187 (522)
T cd03340 182 LDD-----------------------------------------DLD--------------------------------- 187 (522)
T ss_pred hcc-----------------------------------------cCC---------------------------------
Confidence 310 000
Q ss_pred cCCCccccccccceeecccccccCcccccccccccccccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeecc
Q psy14622 234 RFGPEVRGLMLQGVDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAE 313 (788)
Q Consensus 234 ~~~~~~r~~~L~~~~i~~~~~~~tp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (788)
++.+.
T Consensus 188 ----------~~~I~----------------------------------------------------------------- 192 (522)
T cd03340 188 ----------LDMIG----------------------------------------------------------------- 192 (522)
T ss_pred ----------hhHhe-----------------------------------------------------------------
Confidence 00000
Q ss_pred ccCCcceeeEeeecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccccCCCCCchhhh
Q psy14622 314 DVDGEALSTLVVGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFII 393 (788)
Q Consensus 314 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (788)
T Consensus 193 -------------------------------------------------------------------------------- 192 (522)
T cd03340 193 -------------------------------------------------------------------------------- 192 (522)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhhHHHHHHHHHHhhhccCCCCcEEEecCCccceeEEEEEeeEecccccccccccccCCceeEeccceeecccccc--
Q psy14622 394 ELKLVLEYYIQTYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESKI-- 471 (788)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~kvG~dGvItveeg~~~~~~lev~eG~~fd~GylSpyfvt~~e~~~v~l~~p~ILitD~kI-- 471 (788)
++.+ .|....+ .++++|+.|++||.+|||.+.+.+ ++||+||++|.++
T Consensus 193 ------------------------i~~i-~Ggs~~d-s~lv~Giv~~k~~~~~~~~~~~~~----~~n~kIll~~~~Le~ 242 (522)
T cd03340 193 ------------------------IKKV-PGGSLED-SQLVNGVAFKKTFSYAGFEQQPKK----FKNPKILLLNVELEL 242 (522)
T ss_pred ------------------------Eeee-cCCChhh-ceeeeeEEEecccCccccccCCcc----ccCCeEEEEeCCCCC
Confidence 1122 3434443 446899999999999999877753 7899999999884
Q ss_pred -----------cchhh-----------hHHHHHHHHhcCCCeEEEecCCChhhHHhHHhhhcccccceeeecCCCCcchh
Q psy14622 472 -----------SSIQS-----------IIPALELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNR 529 (788)
Q Consensus 472 -----------~~i~~-----------IlP~Le~~~~~~rpLLIIAedi~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R 529 (788)
+++.+ +.+.++.+.+.+-.+++....|++.++..|.-++. .+++-. +
T Consensus 243 ~~~~~~~~i~i~~~~~~~~~~~~E~~~l~~~v~~i~~~g~~vvl~~~~i~d~a~~~l~~~~I------~~~~~v-----~ 311 (522)
T cd03340 243 KAEKDNAEVRVEDPEEYQAIVDAEWKIIYDKLEKIVKSGANVVLSKLPIGDLATQYFADRDI------FCAGRV-----P 311 (522)
T ss_pred CccccceEEEECCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCcHHHHHHHHHCCc------EEEEeC-----C
Confidence 34333 56667777778888888888999999999997744 233222 4
Q ss_pred hhhhhhhHhhhCCeEeccCCCCCcccccCcccccceeEEE---EecCceEEEcCCCCHHHHHHHHHHHHHHHHhcCChHH
Q psy14622 530 KATLQDLAVATGGIVFGDEASPVKLEDLQATDLGSVGEIV---ITKDDTLILKGKGKKEDIDRRADQIRDQIEATTSDYE 606 (788)
Q Consensus 530 ~~~LeDiAilTGg~vis~~~~g~~l~~v~~~~LG~a~~V~---vt~d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~~~ 606 (788)
+..|++||.+|||++++. +++++.++||+|++|. +..++++++.|...+
T Consensus 312 ~~~l~rIa~~tGa~ii~~------l~~l~~~~LG~~~~v~~~~ig~~~~~~~~~~~~~---------------------- 363 (522)
T cd03340 312 EEDLKRVAQATGGSIQTT------VSNITDDVLGTCGLFEERQVGGERYNIFTGCPKA---------------------- 363 (522)
T ss_pred HHHHHHHHHHHCCEEeec------cccCCccccccceEEEEEEECCEEEEEEECCCCC----------------------
Confidence 667999999999999974 5777888999999998 555667777664332
Q ss_pred HHHHHHHHHhhcCCeEEEEecCCchhhHHHHHHHHHHHHHHHHHHHHhc-cccCCchhHhhHHHHhhhhhc-cCccccCC
Q psy14622 607 REKLQERLARLASGVAVLKVGGSSEVEVNEKKDRVTDALNATRAAVEEG-IVPGGGTALLRCIAVLDKLET-ANADQATG 684 (788)
Q Consensus 607 ~~~L~eRla~LsggvAvI~VGG~Te~EikErk~r~edAl~a~raA~e~G-iVpGGG~all~as~~L~~~~~-~~~~~~~G 684 (788)
...+|-+.|+|+..++|.+.+++||++++|+|+++| +|||||+++++++..|.+... .+.+++.|
T Consensus 364 -------------~~~TIllrG~t~~~l~E~er~i~Dal~~~~~~i~~~~vvpGGG~~E~~ls~~l~~~~~~~~~~~~~~ 430 (522)
T cd03340 364 -------------KTCTIILRGGAEQFIEEAERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIAGKQQLV 430 (522)
T ss_pred -------------ceEEEEEECCCHHHHHHHHHHHHHHHHHHHHHhcCCCEEECcCHHHHHHHHHHHHHhccCCCHHHHH
Confidence 247888889999999999999999999999999996 999999999999999876421 11112212
Q ss_pred ChhhHHHHHHHHHHHHHhhcChhHHHHHHHHHHHhccCeEEEEecccHHHHHHHHhcchHHHHHHHhCCchHHHHHHHhc
Q psy14622 685 KKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVLE 764 (788)
Q Consensus 685 ~~~~i~~r~~~l~~~~~~~~~~~d~~~l~eRla~Lsggvavi~vGa~~~e~~e~~~r~~~a~~a~~Aa~e~g~Vv~~~~~ 764 (788)
++...++++.+.+++|.|||+++..|+.++.+
T Consensus 431 ------------------------------------------------~~~fa~aL~~ip~~La~NaG~d~~~~l~~l~~ 462 (522)
T cd03340 431 ------------------------------------------------INAFAKALEIIPRQLCDNAGFDATDILNKLRQ 462 (522)
T ss_pred ------------------------------------------------HHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 88999999999999999999999999999975
Q ss_pred C----C-CCeeEEcCCCcccchhhcCC
Q psy14622 765 S----S-GEMGYDAMNNEYVNMIQKVL 786 (788)
Q Consensus 765 ~----~-~~~Gyda~~~~~~dm~~~Gi 786 (788)
. . ..+|||+.+|+++||++.||
T Consensus 463 ~h~~~~~~~~Gid~~~g~i~d~~~~gV 489 (522)
T cd03340 463 KHAQGGGKWYGVDINNEGIADNFEAFV 489 (522)
T ss_pred HHHccCCCeeeeeCCCCcccchhhcCc
Confidence 2 2 45899999999999999997
No 33
>cd03337 TCP1_gamma TCP-1 (CTT or eukaryotic type II) chaperonin family, gamma subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=100.00 E-value=4.3e-57 Score=511.95 Aligned_cols=402 Identities=21% Similarity=0.298 Sum_probs=336.1
Q ss_pred EeeccCCCCCcCCCCceeeeecCCCCceEeeChHHhhccccccccccChhhHHHHHHhhhcccccCCCchhHHHHHHHHH
Q psy14622 6 LEQSWGSPKITKDDGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIA 85 (788)
Q Consensus 6 i~~~~~S~kiLGPkG~nkmI~~~~G~~~ITnDGvTIlk~I~l~d~~ehpgAkLl~e~A~~qd~evGDGTTTavVLA~aLL 85 (788)
+.+.++|+ |||+||||||+++.|+++|||||+||+++|+++ ||+|+|++++|.+|++++||||||+++||++|+
T Consensus 28 l~~~~~ts--lGP~G~~kmi~~~~g~~~iTnDG~tIlk~l~~~----hP~a~ll~~~a~~q~~~~GDGTtt~vvL~~~Ll 101 (480)
T cd03337 28 VADVIRTC--LGPRAMLKMLLDPMGGIVLTNDGNAILREIDVA----HPAAKSMIELSRTQDEEVGDGTTSVIILAGEIL 101 (480)
T ss_pred HHHHHhcc--CCCCcCceEeEcCCCCEEEeccHHHHHHhcccc----ChHHHHHHHHHHhHHHHhCCCcchhHhhHHHHH
Confidence 34678899 999999999999999999999999999999998 999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhcCCCCC--CHHHHHHHHHhccCCc------hHHhhHHHHHHHHhhhc
Q psy14622 86 KEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVT--TPEEIAQVATISANGD------KAVGELISDAMKRVSAK 157 (788)
Q Consensus 86 ~eglklI~~Gi~P~~I~~Gi~~A~~~ile~L~~ls~~V~--d~eeL~~VA~tSan~d------~~Ig~LIadAv~kV~~~ 157 (788)
+++.+++++|+||..|++||+.|.+.+++.|++++++++ +.+.+.++|++|++++ +.+++++++|+..+++.
T Consensus 102 ~~a~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~~~~l~~i~~t~l~sK~~~~~~~~ls~lv~~Ai~~v~~~ 181 (480)
T cd03337 102 AVAEPFLERGIHPTVIIKAYRKALEDALKILEEISIPVDVNDRAQMLKIIKSCIGTKFVSRWSDLMCNLALDAVKTVAVE 181 (480)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhccccccCCHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHhhccc
Confidence 999999999999999999999999999999999999987 7889999999999976 57999999999983110
Q ss_pred cccccceeeeccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhcccccccccccccccccCCC
Q psy14622 158 VEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRFGP 237 (788)
Q Consensus 158 ~e~~d~~ILite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~~~~~ 237 (788)
- -|.
T Consensus 182 ~----------------------------------------------------------------------------~~~ 185 (480)
T cd03337 182 E----------------------------------------------------------------------------NGR 185 (480)
T ss_pred c----------------------------------------------------------------------------CCC
Confidence 0 000
Q ss_pred ccccccccceeecccccccCcccccccccccccccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeeccccCC
Q psy14622 238 EVRGLMLQGVDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDG 317 (788)
Q Consensus 238 ~~r~~~L~~~~i~~~~~~~tp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 317 (788)
...+++
T Consensus 186 ------~~~id~-------------------------------------------------------------------- 191 (480)
T cd03337 186 ------KKEIDI-------------------------------------------------------------------- 191 (480)
T ss_pred ------CCcCCh--------------------------------------------------------------------
Confidence 000000
Q ss_pred cceeeEeeecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccccCCCCCchhhhhhhh
Q psy14622 318 EALSTLVVGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFIIELKL 397 (788)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (788)
T Consensus 192 -------------------------------------------------------------------------------- 191 (480)
T cd03337 192 -------------------------------------------------------------------------------- 191 (480)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHHHHHHHHHhhhccCCCCcEEEe--cCCccceeEEEEEeeEecccccccccccccCCceeEeccceeecccccccchh
Q psy14622 398 VLEYYIQTYIYLCLKVGKEGVITVK--DGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESKISSIQ 475 (788)
Q Consensus 398 ~~~~~~~~~~~~~~kvG~dGvItve--eg~~~~~~lev~eG~~fd~GylSpyfvt~~e~~~v~l~~p~ILitD~kI~~i~ 475 (788)
+-.|.++ .|....+ .++++|+.|++|+.+| +|...++||+||+++.+|+.
T Consensus 192 ------------------~~~I~i~ki~Ggs~~d-s~li~Gvvi~k~~~~~-------~m~~~~~n~kIlll~~~Le~-- 243 (480)
T cd03337 192 ------------------KRYAKVEKIPGGEIED-SRVLDGVMLNKDVTHP-------KMRRRIENPRIVLLDCPLEY-- 243 (480)
T ss_pred ------------------hhceEEEEecCCCHHh-cccccceEEeccCCCC-------CCCcEecCCCEEEEecCcce--
Confidence 0011222 2444444 6789999999998765 56678899999999998765
Q ss_pred hhHHHHHHHHhcCCCeEEEecCCChhhHHhHHhhhcccccceeeecCCCCcchhhhhhhhhHhhhCCeEeccCCCCCccc
Q psy14622 476 SIIPALELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATLQDLAVATGGIVFGDEASPVKLE 555 (788)
Q Consensus 476 ~IlP~Le~~~~~~rpLLIIAedi~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~~~LeDiAilTGg~vis~~~~g~~l~ 555 (788)
|+|++++|++.|+..|..| .+++|+. .++..|+|||.+|||++++. ++
T Consensus 244 ---------------lvi~~k~I~d~al~~L~~~------~I~~v~~-----v~~~~L~rIa~~tGa~ii~~------~~ 291 (480)
T cd03337 244 ---------------LVITEKGVSDLAQHYLVKA------GITALRR-----VRKTDNNRIARACGATIVNR------PE 291 (480)
T ss_pred ---------------EEEeCCCccHHHHHHHHHC------CcEEEEe-----CCHHHHHHHHHHHCCEEecc------hh
Confidence 7888999999999999988 5678875 36778999999999999974 46
Q ss_pred ccCcccccceeEEEE----ecCceEEEcCCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHhhcCCeEEEEecCCch
Q psy14622 556 DLQATDLGSVGEIVI----TKDDTLILKGKGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSE 631 (788)
Q Consensus 556 ~v~~~~LG~a~~V~v----t~d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~~~~~~L~eRla~LsggvAvI~VGG~Te 631 (788)
+++.++||+|.++.. +++.++++++.+++ ++++|.++|+|+
T Consensus 292 ~l~~~~LG~~~~~~~~~~~~~~~~~~i~~~~~~-----------------------------------~~~TIllrG~t~ 336 (480)
T cd03337 292 ELTESDVGTGAGLFEVKKIGDEYFTFITECKDP-----------------------------------KACTILLRGASK 336 (480)
T ss_pred hCCHHHcCCcccEEEEEEeCCeEEEEEEcCCCC-----------------------------------CEEEEEEECCCH
Confidence 777889999554433 44677888876553 579999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHh-ccccCCchhHhhHHHHhhhhhc-cCccccCCChhhHHHHHHHHHHHHHhhcChhHH
Q psy14622 632 VEVNEKKDRVTDALNATRAAVEE-GIVPGGGTALLRCIAVLDKLET-ANADQATGKKEDIDRRADQIRDQIEATTSDYER 709 (788)
Q Consensus 632 ~EikErk~r~edAl~a~raA~e~-GiVpGGG~all~as~~L~~~~~-~~~~~~~G~~~~i~~r~~~l~~~~~~~~~~~d~ 709 (788)
.+++|.+..++||++++++++++ |+|||||+++++++..|.+... .+..++.|
T Consensus 337 ~~l~e~er~l~DAl~v~~~~~~~~~~vpGGGa~E~~ls~~l~~~~~~~~~~~~~~------------------------- 391 (480)
T cd03337 337 DVLNEVERNLQDAMAVARNIILNPKLVPGGGATEMAVSHALSEKAKSIEGVEQWP------------------------- 391 (480)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCEEeCCCHHHHHHHHHHHHHhhcCCCHHHHH-------------------------
Confidence 99999999999999999999999 7999999999999999875422 12222222
Q ss_pred HHHHHHHHHhccCeEEEEecccHHHHHHHHhcchHHHHHHHhCCchHHHHHHHhcC-----CCCeeEEcCCCcccchhhc
Q psy14622 710 EKLQERLARLASGVAVLKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVLES-----SGEMGYDAMNNEYVNMIQK 784 (788)
Q Consensus 710 ~~l~eRla~Lsggvavi~vGa~~~e~~e~~~r~~~a~~a~~Aa~e~g~Vv~~~~~~-----~~~~Gyda~~~~~~dm~~~ 784 (788)
++...++++.+.+++|.|||++.-.|+.+++.. ..++|||+.+|+++||++.
T Consensus 392 -----------------------~~~~a~al~~ip~~La~NaG~d~~~~l~~l~~~h~~~~~~~~Gid~~~g~i~d~~~~ 448 (480)
T cd03337 392 -----------------------YKAVASALEVIPRTLAQNCGANVIRTLTELRAKHAQGENSTWGIDGETGDIVDMKEL 448 (480)
T ss_pred -----------------------HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHccCCCeECeeccCCCcccchhc
Confidence 788999999999999999999999999998752 3458999999999999999
Q ss_pred CC
Q psy14622 785 VL 786 (788)
Q Consensus 785 Gi 786 (788)
||
T Consensus 449 gV 450 (480)
T cd03337 449 GI 450 (480)
T ss_pred cC
Confidence 97
No 34
>PF00118 Cpn60_TCP1: TCP-1/cpn60 chaperonin family Chaperonins cpn60 signature Chaperonins TCP-1 signatures 60 kd chaperonin signature; InterPro: IPR002423 Partially folded polypeptide chains, either newly made by ribosomes or emerging from mature proteins unfolded by stress, run the risk of aggregating with one another to the detriment of the organism. Folding of newly synthesised polypeptides in the crowded cellular environment requires the assistance of molecular chaperone proteins, such as the large bacterial chaperonins GroEL and GroES. GroEL and GroES prevent aggregation by encapsulating individual chains within the so-called 'Anfinsen cage' provided by the GroEL-GroES complex, where they can fold in isolation from one another []. GroEL consists of two heptameric rings of identical ATPase subunits stacked back to back, containing a cage in each ring. Each subunit consists of three domains. The equatorial domain contains the nucleotide binding site and is connected by a flexible intermediate domain with the apical domain. The latter presents several hydrophobic amino-acid side chains at the top of the ring, orientated towards the cavity of the cage. These side chains are involved in binding either a partially folded polypeptide chain or a single molecule of GroES. The assembly of proteins has been thought to be the sole result of properties inherent in the primary sequence of polypeptides themselves. In some cases, however, structural information from other protein molecules is required for correct folding and subsequent assembly into oligomers []. These 'helper' molecules are referred to as molecular chaperones, a subfamily of which are the chaperonins [], which include 10 kDa and 60 kDa proteins. These are found in abundance in prokaryotes, chloroplasts and mitochondria. They are required for normal cell growth (as demonstrated by the fact that no temperature sensitive mutants for the chaperonin genes can be found in the temperature range 20 to 43 degrees centigrade []), and are stress-induced, acting to stabilise or protect disassembled polypeptides under heat-shock conditions []. The 10 kDa chaperonin (cpn10 - or groES in bacteria) exists as a ring-shaped oligomer of between 6 to 8 identical subunits, whereas the 60 kDa chaperonin (cpn60 - or groEL in bacteria) forms a structure comprising 2 stacked rings, each ring containing 7 identical subunits []. These ring structures assemble by self-stimulation in the presence of Mg2+-ATP. The cpn10 and cpn60 oligomers also require Mg2+-ATP in order to interact to form a functional complex, although the mechanism of this interaction is as yet unknown []. This chaperonin complex is essential for the correct folding and assembly of polypeptides into oligomeric structures, of which the chaperonins themselves are not a part []. The binding of cpn10 to cpn60 inhibits the weak ATPase activity of cpn60. The 60 kDa form of chaperonin is the immunodominant antigen of patients with Legionnaire's disease [], and is thought to play a role in the protection of the Legionella bacteria from oxygen radicals within macrophages. This hypothesis is based on the finding that the cpn60 gene is upregulated in response to hydrogen peroxide, a source of oxygen radicals. Cpn60 has also been found to display strong antigenicity in many bacterial species [], and has the potential for inducing immune protection against unrelated bacterial infections. The RuBisCO subunit binding protein (which has been implicated in the assembly of RuBisCO) and cpn60 have been found to be evolutionary homologues, the RuBisCO subunit binding protein having the C-terminal Gly-Gly-Met repeat found in all bacterial cpn60 sequences. Although the precise function of this repeat is unknown, it is thought to be important as it is also found in 70 kDa heat-shock proteins []. The crystal structure of Escherichia coli GroEL has been resolved to 2.8A []. The TCP-1 family of proteins act as molecular chaperones for tubulin, actin and probably some other proteins. They are weakly, but significantly, related to the cpn60/groEL chaperonin family. ; GO: 0005524 ATP binding, 0044267 cellular protein metabolic process; PDB: 3IZH_B 3IZI_I 3LOS_I 3IYF_H 3KFK_C 3KFE_E 3RUV_C 3IZK_L 3J02_B 3RUQ_A ....
Probab=100.00 E-value=2.6e-54 Score=485.43 Aligned_cols=414 Identities=28% Similarity=0.448 Sum_probs=359.6
Q ss_pred eeccCCCCCcCCCCceeeeecCCCCceEeeChHHhhccccccccccChhhHHHHHHhhhcccccCCCchhHHHHHHHHHH
Q psy14622 7 EQSWGSPKITKDDGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIAK 86 (788)
Q Consensus 7 ~~~~~S~kiLGPkG~nkmI~~~~G~~~ITnDGvTIlk~I~l~d~~ehpgAkLl~e~A~~qd~evGDGTTTavVLA~aLL~ 86 (788)
++.++|+ |||+||+|||+++.|+++|||||+||+++++++ ||.++|+++++.+|++++||||||+++|+++|++
T Consensus 2 ~~~v~ss--lGP~G~~kli~~~~g~~~iTndg~tIl~~l~~~----~P~~~ll~~~~~~~~~~~GDGtts~vlL~~~ll~ 75 (485)
T PF00118_consen 2 ADIVKSS--LGPKGRDKLIVNDSGKIIITNDGATILKSLKIN----HPIAKLLVEASKSQDEEVGDGTTSVVLLACELLR 75 (485)
T ss_dssp HHHHGCC--SSTTS-EEEEEESSSSEEEESSHHHHHHHSTBS----SHHHHHHHHHHHHHHHHTSSHHHHHHHHHHHHHH
T ss_pred hhhcccC--cCCCCCeEEEEcCCCCeEEEechhHHHHHhhhc----cchhhhHHHhHHHHHhhhccccceeeecccchhh
Confidence 4678899 999999999999999999999999999999998 9999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhcCCCCCCH-HHHHHHHHhccCCc------hHHhhHHHHHHHHhhhccc
Q psy14622 87 EGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVTTP-EEIAQVATISANGD------KAVGELISDAMKRVSAKVE 159 (788)
Q Consensus 87 eglklI~~Gi~P~~I~~Gi~~A~~~ile~L~~ls~~V~d~-eeL~~VA~tSan~d------~~Ig~LIadAv~kV~~~~e 159 (788)
++.+++++|+||..|++||+.|.+.+++.|++++.++++. +.+.++|.++++++ +.+++++++|+..+..
T Consensus 76 ~~~~li~~gi~p~~I~~~~~~~~~~~~~~l~~~s~~~~~~~~~l~~i~~t~l~~k~~~~~~~~l~~li~~a~~~~~~--- 152 (485)
T PF00118_consen 76 NALKLIKKGIHPQEIIRGLQEALKIILEYLEKISIPINNDDESLLNIAKTSLNSKISSSWSDHLSKLIVDAIKSIKS--- 152 (485)
T ss_dssp HHHHHHHTTS-HHHHHHHHHHHHHHHHHHHHHHSEESTSTSHHHHHHHHHHHTTSCGGGCHHHHHHHHHHHHHHHTT---
T ss_pred hhhhhhhccccccchhhhhhhhhhhhhhhhhhhhccccccchhhhhhhcccccccccccchhhhhhhHHHHHHhhcc---
Confidence 9999999999999999999999999999999999998866 89999999999998 7899999999943100
Q ss_pred cccceeeeccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhcccccccccccccccccCCCcc
Q psy14622 160 FQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRFGPEV 239 (788)
Q Consensus 160 ~~d~~ILite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~~~~~~~ 239 (788)
.
T Consensus 153 ------------------------------------------~------------------------------------- 153 (485)
T PF00118_consen 153 ------------------------------------------N------------------------------------- 153 (485)
T ss_dssp ------------------------------------------T-------------------------------------
T ss_pred ------------------------------------------c-------------------------------------
Confidence 0
Q ss_pred ccccccceeecccccccCcccccccccccccccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeeccccCCcc
Q psy14622 240 RGLMLQGVDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEA 319 (788)
Q Consensus 240 r~~~L~~~~i~~~~~~~tp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 319 (788)
T Consensus 154 -------------------------------------------------------------------------------- 153 (485)
T PF00118_consen 154 -------------------------------------------------------------------------------- 153 (485)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeeEeeecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccccCCCCCchhhhhhhhhH
Q psy14622 320 LSTLVVGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFIIELKLVL 399 (788)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (788)
T Consensus 154 -------------------------------------------------------------------------------- 153 (485)
T PF00118_consen 154 -------------------------------------------------------------------------------- 153 (485)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHhhhccCCCCcEEEecCCccceeEEEEEeeEecccccccccccccCCceeEeccceeecccccccchhh---
Q psy14622 400 EYYIQTYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESKISSIQS--- 476 (788)
Q Consensus 400 ~~~~~~~~~~~~kvG~dGvItveeg~~~~~~lev~eG~~fd~GylSpyfvt~~e~~~v~l~~p~ILitD~kI~~i~~--- 476 (788)
..++..+++.+..|.. ...++++|+.|+++|.+| .|...+++|.|++++..|+..+.
T Consensus 154 -----------~~~~~i~i~~i~g~~~--~dS~li~Giv~~~~~~~~-------~~~~~~~~~~Ill~~~~L~~~~~~~~ 213 (485)
T PF00118_consen 154 -----------FDLDNIKIIKIPGGSI--SDSELINGIVLDKGFSSP-------NMPKKIENPKILLLNCPLEYSKSFKS 213 (485)
T ss_dssp -----------HHGGGEEEEEEESSSS--GGEEEESEEEESSSBSST-------TSBSEEESEEEEEESSEBSSCCHSTE
T ss_pred -----------ccccchhhhhhccccc--cccccccceeeecccccc-------ccccccccceEEeeeccccccccccc
Confidence 0022344555565555 234556999999999988 44445699999999999998888
Q ss_pred --------------------hHHHHHHHHhcCCCeEEEecCCChhhHHhHHhhhcccccceeeecCCCCcchhhhhhhhh
Q psy14622 477 --------------------IIPALELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATLQDL 536 (788)
Q Consensus 477 --------------------IlP~Le~~~~~~rpLLIIAedi~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~~~LeDi 536 (788)
+.++++.+.+.+.+|+|++++|++.++..|..|++....++ ++..|++|
T Consensus 214 ~~~~~~~~~~~~~~~~e~~~l~~~~~~i~~~~~~lIi~~~~i~~~~l~~l~~~~I~~i~~v-----------~~~~l~~i 282 (485)
T PF00118_consen 214 EIRITSPEQLDELSKQEKKYLKKILEKIINLGVNLIISQKSIDDEALQYLNKNGILVIRRV-----------SKEDLERI 282 (485)
T ss_dssp EEEESSTHHHHHHHHHHHHHHHHHHHHHHTTTSSEEEESSEBTHHHHHHHHHCTHEEESSE-----------HHHHHHHH
T ss_pred ccchhhHHHHHHHHhhhhhhhccccceEeeeccceeeeecccccccchhhhhhhhhccccc-----------hHHHHHhh
Confidence 99999999999999999999999999999999988776666 77889999
Q ss_pred HhhhCCeEeccCCCCCcccccCcccccceeEE---EEecCceEEEcCCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHH
Q psy14622 537 AVATGGIVFGDEASPVKLEDLQATDLGSVGEI---VITKDDTLILKGKGKKEDIDRRADQIRDQIEATTSDYEREKLQER 613 (788)
Q Consensus 537 AilTGg~vis~~~~g~~l~~v~~~~LG~a~~V---~vt~d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~~~~~~L~eR 613 (788)
|.+||+.+++.. ++++.++||+|+++ .++.++++++.+
T Consensus 283 ~~~tg~~ii~~~------~~l~~~~lG~~~~v~~~~i~~~~~~~~~~--------------------------------- 323 (485)
T PF00118_consen 283 ARATGASIISSL------DDLSDEDLGFCKSVEEREIGNKKYIFIEG--------------------------------- 323 (485)
T ss_dssp HHHHTSBEBSSC------GGSTGGGSEEEEEEEEEEETSSEEEEEEE---------------------------------
T ss_pred hcccCCcEeccc------ccccchhhhhhhhhhhccccccccccccc---------------------------------
Confidence 999999999753 66667779999999 888999999886
Q ss_pred HHhhcCCeEEEEecCCchhhHHHHHHHHHHHHHHHHHHHH-hccccCCchhHhhHHHHhhhhh-ccCccccCCChhhHHH
Q psy14622 614 LARLASGVAVLKVGGSSEVEVNEKKDRVTDALNATRAAVE-EGIVPGGGTALLRCIAVLDKLE-TANADQATGKKEDIDR 691 (788)
Q Consensus 614 la~LsggvAvI~VGG~Te~EikErk~r~edAl~a~raA~e-~GiVpGGG~all~as~~L~~~~-~~~~~~~~G~~~~i~~ 691 (788)
...+++++++|.++|+|+.+++|++.+++||++++|++++ .|+|||||+++++++..|.+.. ..+.++..+
T Consensus 324 ~~~~~~~~~Till~g~t~~~l~e~~~~i~dal~~~~~~~~~~~vvpGGG~~e~~l~~~L~~~~~~~~~~~~~~------- 396 (485)
T PF00118_consen 324 IGCLSSKICTILLRGPTEFELEERERSIHDALKVLRSALKDGGVVPGGGATELHLSKALRKYAKSLSGKEQLA------- 396 (485)
T ss_dssp HSESSSSEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHSSEEEETTTHHHHHHHHHHHHHHHCSSSHHHHH-------
T ss_pred ccccccCceEEEeccccchhHHHHHHHHHHHHHHHHHhccCCceeecCcchhhhhhhhHHHhhhcccCchhhh-------
Confidence 1127889999999999999999999999999999999999 5799999999999999995432 222222222
Q ss_pred HHHHHHHHHHhhcChhHHHHHHHHHHHhccCeEEEEecccHHHHHHHHhcchHHHHHHHhCCchHHHHHHHhc---CCCC
Q psy14622 692 RADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVLE---SSGE 768 (788)
Q Consensus 692 r~~~l~~~~~~~~~~~d~~~l~eRla~Lsggvavi~vGa~~~e~~e~~~r~~~a~~a~~Aa~e~g~Vv~~~~~---~~~~ 768 (788)
++...++++.+.+.++.|||++...++.++.. .+..
T Consensus 397 -----------------------------------------~~~~a~aL~~ip~~L~~NaG~~~~~~~~~l~~~h~~~~~ 435 (485)
T PF00118_consen 397 -----------------------------------------IEAFADALESIPKTLAQNAGLDSSEVISKLKSFHNNGNN 435 (485)
T ss_dssp -----------------------------------------HHHHHHHTTHHHHHHHHHTTSTHHHHHHHHHHHHHSTTT
T ss_pred -----------------------------------------HHHHHHHHHHhhhhhhhccCCCceeeehhhHhhhccccc
Confidence 89999999999999999999999999999987 4568
Q ss_pred eeEEcCCCcccchhhcCC
Q psy14622 769 MGYDAMNNEYVNMIQKVL 786 (788)
Q Consensus 769 ~Gyda~~~~~~dm~~~Gi 786 (788)
+|||..+++++||.+.||
T Consensus 436 ~g~d~~~~~i~~~~~~gi 453 (485)
T PF00118_consen 436 YGIDLDTGEIVDMKEAGI 453 (485)
T ss_dssp EEEETTTTEEEETTTTTC
T ss_pred cCcCccCCceeccccccc
Confidence 999999999999999996
No 35
>KOG0358|consensus
Probab=100.00 E-value=2.5e-36 Score=321.67 Aligned_cols=442 Identities=22% Similarity=0.332 Sum_probs=318.0
Q ss_pred eeccCCCCCcCCCCceeeeecCCCCceEeeChHHhhccccccccccChhhHHHHHHhhhcccccCCCchhHHHHHHHHHH
Q psy14622 7 EQSWGSPKITKDDGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIAK 86 (788)
Q Consensus 7 ~~~~~S~kiLGPkG~nkmI~~~~G~~~ITnDGvTIlk~I~l~d~~ehpgAkLl~e~A~~qd~evGDGTTTavVLA~aLL~ 86 (788)
.|.++++ |||+||+|||+...|+.+|||||+||+|.|.+- ||+|+|+.+++..||.++||||||+++||++||.
T Consensus 39 adairTS--LGPkGmDKMIq~~~gev~iTNDGaTILk~m~vl----hP~akmLvelS~aQD~eaGDGTTsVVilaGaLL~ 112 (534)
T KOG0358|consen 39 ADAIRTS--LGPKGMDKMIQTGKGEVIITNDGATILKQMNVL----HPAAKMLVELSAAQDSEAGDGTTSVVILAGALLE 112 (534)
T ss_pred HHHHHhc--cCccchhhHhhcCCCcEEEecChHHHHHHHhhh----ChHHHHHHHhhhhccccccCCceEEEEehhhHHH
Confidence 4668999 999999999999999999999999999999988 9999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhcCCCCC--CHHHHHHHHHhccCCc------hHHhhHHHHHHHHhhhcc
Q psy14622 87 EGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVT--TPEEIAQVATISANGD------KAVGELISDAMKRVSAKV 158 (788)
Q Consensus 87 eglklI~~Gi~P~~I~~Gi~~A~~~ile~L~~ls~~V~--d~eeL~~VA~tSan~d------~~Ig~LIadAv~kV~~~~ 158 (788)
.+.+++++|+||..|...|+.|.+..++.|.+|+.|++ +++.|.+-|+||+|++ ..++.|.++|+.++.+
T Consensus 113 ~~~~LL~kgiHPtvIsdsfq~a~~~~v~il~~m~~~velsdre~Li~~atTsLnSKvvSq~s~llapmAVdAV~kv~d-- 190 (534)
T KOG0358|consen 113 AAEKLLQKGIHPTVISDSFQSAAKKAVDILDEMSVPVELSDRESLIKSATTSLNSKVVSQYSSLLAPMAVDAVLKVID-- 190 (534)
T ss_pred HHHHHHhcCCCchhhhHHHHHHHHHHHHHHHhcCCCcccCcHHHHHHHHHhHhhHHHHHhhccccchHHHHHHHhccC--
Confidence 99999999999999999999999999999999999976 7888999999999987 4577888888887411
Q ss_pred ccccceeeeccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhcccccccccccccccccCCCc
Q psy14622 159 EFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRFGPE 238 (788)
Q Consensus 159 e~~d~~ILite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~~~~~~ 238 (788)
++ -
T Consensus 191 ------------------------------------------p~-----------------------------------~ 193 (534)
T KOG0358|consen 191 ------------------------------------------PE-----------------------------------N 193 (534)
T ss_pred ------------------------------------------cc-----------------------------------c
Confidence 00 0
Q ss_pred cccccccceeecccccccCcccccccccccccccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeeccccCCc
Q psy14622 239 VRGLMLQGVDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGE 318 (788)
Q Consensus 239 ~r~~~L~~~~i~~~~~~~tp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 318 (788)
..|-+|.++.++
T Consensus 194 ~~nvdlkdIkiv-------------------------------------------------------------------- 205 (534)
T KOG0358|consen 194 ATNVDLKDIKIV-------------------------------------------------------------------- 205 (534)
T ss_pred ccccchhhhhhH--------------------------------------------------------------------
Confidence 112223333220
Q ss_pred ceeeEeeecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccccCCCCCchhhhhhhhh
Q psy14622 319 ALSTLVVGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFIIELKLV 398 (788)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (788)
-|.| -++ |+.+-+.+-+++.
T Consensus 206 -----------------------------------kklG----------gtv-dDte~i~glvl~~-------------- 225 (534)
T KOG0358|consen 206 -----------------------------------KKLG----------GTV-DDTELIKGLVLTQ-------------- 225 (534)
T ss_pred -----------------------------------HhhC----------Ccc-chhhhhcceEEee--------------
Confidence 0000 000 0000111111110
Q ss_pred HHHHHHHHHHhhhccCCCCcEEEecCCccceeEEEEEeeEecccccccccccccCCceeEeccceeecccc-----cccc
Q psy14622 399 LEYYIQTYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSES-----KISS 473 (788)
Q Consensus 399 ~~~~~~~~~~~~~kvG~dGvItveeg~~~~~~lev~eG~~fd~GylSpyfvt~~e~~~v~l~~p~ILitD~-----kI~~ 473 (788)
.-.+..|--.+|..+.- =+|| .+||-- ||.++. |++.|- -+..
T Consensus 226 ------------~~~~~~gptriekAkIg--------lIQF---~iS~PK-tdmen~--------iiv~DyaqMdrilke 273 (534)
T KOG0358|consen 226 ------------KASKSAGPTRIEKAKIG--------LIQF---QISPPK-TDMENQ--------IIVNDYAQMDRILKE 273 (534)
T ss_pred ------------ecccCCCcchhhhceee--------EEEE---EecCCC-CCcccc--------eEecCHHHHHHHHHH
Confidence 00111122222222210 0122 234432 233322 333332 2221
Q ss_pred -hhhhHHHHHHHHhcCCCeEEEecCCChhhHHhHHhhhcccccceeeecCCCCcchhhhhhhhhHhhhCCeEeccCCCCC
Q psy14622 474 -IQSIIPALELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATLQDLAVATGGIVFGDEASPV 552 (788)
Q Consensus 474 -i~~IlP~Le~~~~~~rpLLIIAedi~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~~~LeDiAilTGg~vis~~~~g~ 552 (788)
-+-|+.+..++.+++-.+|+|.+.|=.||++-|..+-+ ..+++-.||.- -++-+|.+....|.+.+++
T Consensus 274 ER~YiL~mcKkIKk~gcnvLliQKSILRdavsDLAlHfL-~klkimvikdi-----eRediefick~l~c~Pia~----- 342 (534)
T KOG0358|consen 274 ERQYILNMCKKIKKAGCNVLLIQKSILRDAVSDLALHFL-AKLKIMVIKDI-----EREDIEFICKTLGCKPIAD----- 342 (534)
T ss_pred HHHHHHHHHHHHHhcCCeEEEEeHHHHHHHHHHHHHHHH-HhCcEEEEccc-----cHhhHHHHHhhcCCeecch-----
Confidence 23477777777788999999999999999999998755 56788888765 3455788999999999874
Q ss_pred cccccCcccccceeEEEEe---cC-ceEEEcCCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHhhcCCeEEEEecC
Q psy14622 553 KLEDLQATDLGSVGEIVIT---KD-DTLILKGKGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGG 628 (788)
Q Consensus 553 ~l~~v~~~~LG~a~~V~vt---~d-~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~~~~~~L~eRla~LsggvAvI~VGG 628 (788)
++.++.+.||+|+-|+=+ .+ +.+=+.|..+ .|....|.+.|
T Consensus 343 -id~f~~d~Lg~adlveE~~~~G~gkivk~tg~~n----------------------------------~g~tvsil~RG 387 (534)
T KOG0358|consen 343 -IDHFTADKLGSADLVEETDSSGEGKIVKITGIQN----------------------------------AGRTVSILLRG 387 (534)
T ss_pred -hhhcChhhcCcchhhhhcccCCCccEEEEEEeec----------------------------------CCCceEEEEec
Confidence 488899999999988533 22 2222333211 25568899999
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHHHh-ccccCCchhHhhHHHHhhhhhccCccccCCChhhHHHHHHHHHHHHHhhcChh
Q psy14622 629 SSEVEVNEKKDRVTDALNATRAAVEE-GIVPGGGTALLRCIAVLDKLETANADQATGKKEDIDRRADQIRDQIEATTSDY 707 (788)
Q Consensus 629 ~Te~EikErk~r~edAl~a~raA~e~-GiVpGGG~all~as~~L~~~~~~~~~~~~G~~~~i~~r~~~l~~~~~~~~~~~ 707 (788)
.+..-+.|-...+.|||+.+|.-++. +.+||||+-.+..+..|..+... -.|-
T Consensus 388 sn~lvleEaeRSlhDALCVirCLvk~r~li~GGGapEieia~~L~~~a~t----~eG~---------------------- 441 (534)
T KOG0358|consen 388 SNKLVLEEAERSLHDALCVIRCLVKKRALIAGGGAPEIEIALRLSALART----LEGV---------------------- 441 (534)
T ss_pred CchhhhHHHhhhhhhhhHHHHhhhhccceecCCCCcchHHHHHHHHHHhh----hccc----------------------
Confidence 99999999999999999999988887 89999999998888777554311 1120
Q ss_pred HHHHHHHHHHHhccCeEEEEecccHHHHHHHHhcchHHHHHHHhCCchHHHHHHHhcC----CCCeeEEcCCCcccchhh
Q psy14622 708 EREKLQERLARLASGVAVLKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVLES----SGEMGYDAMNNEYVNMIQ 783 (788)
Q Consensus 708 d~~~l~eRla~Lsggvavi~vGa~~~e~~e~~~r~~~a~~a~~Aa~e~g~Vv~~~~~~----~~~~Gyda~~~~~~dm~~ 783 (788)
+ +--+.-...++.+.....|.|||+..=-+|..+++. ....|.|+++|-..||++
T Consensus 442 --~-------------------~yc~rafA~AlEvIP~tLAeNAGLnpI~~VtELRn~haqge~~aGInVRkg~~tni~e 500 (534)
T KOG0358|consen 442 --E-------------------AYCWRAFADALEVIPYTLAENAGLNPIATVTELRNRHAQGEKNAGINVRKGGITNILE 500 (534)
T ss_pred --h-------------------hHHHHHHHHHHhcccHhHHhhCCCChhhHHHHHHHHHhcCCcccceeeecccchhhHH
Confidence 0 000445668889999999999999998888888752 246899999999999998
Q ss_pred cCC
Q psy14622 784 KVL 786 (788)
Q Consensus 784 ~Gi 786 (788)
.-+
T Consensus 501 e~V 503 (534)
T KOG0358|consen 501 ENV 503 (534)
T ss_pred Hhc
Confidence 754
No 36
>KOG0359|consensus
Probab=100.00 E-value=2.4e-36 Score=326.23 Aligned_cols=439 Identities=22% Similarity=0.339 Sum_probs=348.1
Q ss_pred eccCCCCCcCCCCceeeeecCCCCceEeeChHHhhccccccccccChhhHHHHHHhhhcccccCCCchhHHHHHHHHHHH
Q psy14622 8 QSWGSPKITKDDGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIAKE 87 (788)
Q Consensus 8 ~~~~S~kiLGPkG~nkmI~~~~G~~~ITnDGvTIlk~I~l~d~~ehpgAkLl~e~A~~qd~evGDGTTTavVLA~aLL~e 87 (788)
+.++|. +||+|.-||++++.|++.+|+||.+.+++|+++ ||.|-++..+|..|++..||||||+|+|.++++++
T Consensus 31 sV~~sn--lgPkgt~KmlvsgagdIklakdgnvLl~emQiq----hPTa~lIakaatAqdd~tGDGttS~VlligEllkq 104 (520)
T KOG0359|consen 31 SVLVLN--LGPKGTEKMLVSGAGDIKLAKDGNVLLKEMQIQ----HPTASLIAKVATAQDDITGDGTTSVVLLIGELLKQ 104 (520)
T ss_pred eeehhc--cCchhHHHhccCCccceEEEecchhhHHHHhhc----CchHHHHHHHHHHhhcccCCCcceEEEeeHHHHHH
Confidence 457888 999999999999999999999999999999999 99999999999999999999999999999999999
Q ss_pred HHHHHhcCCCchhHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHhccCCc--hH----HhhHHHHHHHHhhhccccc
Q psy14622 88 GFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVTTPEEIAQVATISANGD--KA----VGELISDAMKRVSAKVEFQ 161 (788)
Q Consensus 88 glklI~~Gi~P~~I~~Gi~~A~~~ile~L~~ls~~V~d~eeL~~VA~tSan~d--~~----Ig~LIadAv~kV~~~~e~~ 161 (788)
+..++..|+||..|..||+.|.+.+++.|++.+.++ +++.|..||++|++++ .. +..++++|+..+
T Consensus 105 a~~~i~eGlhprii~~gfe~a~~~~l~~L~k~~~~~-~~~~L~~va~tsl~Tkv~~~la~~lt~~vv~aVl~i------- 176 (520)
T KOG0359|consen 105 ADRYISEGLHPRIITEGFEAAKNKALEFLEKVSREV-DRETLKDVARTSLRTKVHAELADVLTPIVVDSVLCI------- 176 (520)
T ss_pred HHHHhhcCCCcchhhhHHHHHHHHHHhhhhccccch-hHHHHHHHHHHhhcCcccHHHHhHhHHHHHhhheee-------
Confidence 999999999999999999999999999999777776 4889999999999986 33 444444444431
Q ss_pred cceeeeccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhcccccccccccccccccCCCcccc
Q psy14622 162 DALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRFGPEVRG 241 (788)
Q Consensus 162 d~~ILite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~~~~~~~r~ 241 (788)
+ ....+
T Consensus 177 ------------------------------------------------------~--------------------~~~~~ 182 (520)
T KOG0359|consen 177 ------------------------------------------------------R--------------------RQEEP 182 (520)
T ss_pred ------------------------------------------------------c--------------------cCCCC
Confidence 1 01233
Q ss_pred ccccceeecccccccCcccccccccccccccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeeccccCCccee
Q psy14622 242 LMLQGVDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALS 321 (788)
Q Consensus 242 ~~L~~~~i~~~~~~~tp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 321 (788)
.+|+|+++ |+-
T Consensus 183 idl~mvei---------------------------m~m------------------------------------------ 193 (520)
T KOG0359|consen 183 IDLFMVEI---------------------------MEM------------------------------------------ 193 (520)
T ss_pred cchhHHHh---------------------------hhh------------------------------------------
Confidence 56777755 100
Q ss_pred eEeeecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccccCCCCCchhhhhhhhhHHH
Q psy14622 322 TLVVGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFIIELKLVLEY 401 (788)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (788)
+++.. -+-.-+.+-+.|++.++| .|+..
T Consensus 194 --------------------------------------------q~~s~-~dT~~v~glvLdhg~rHp-------dmp~~ 221 (520)
T KOG0359|consen 194 --------------------------------------------QHKSL-HDTSLVQGLVLDHGARHP-------DMPRR 221 (520)
T ss_pred --------------------------------------------ccCch-hhhHHhhhhhccCCCCCc-------ccccc
Confidence 11111 144556788999999999 88898
Q ss_pred HHHHHHHhhhccCCCCcEEEecCCccceeEEEEEeeEecccccccccccccCCceeEeccceeeccccccc--chhhhHH
Q psy14622 402 YIQTYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESKIS--SIQSIIP 479 (788)
Q Consensus 402 ~~~~~~~~~~kvG~dGvItveeg~~~~~~lev~eG~~fd~GylSpyfvt~~e~~~v~l~~p~ILitD~kI~--~i~~IlP 479 (788)
+.|.|++ +.+.+||+ |--++++|| |+...+.. -.....+++.. .++.|+.
T Consensus 222 ~e~a~iL-----------------~~NvSLEY-EK~Einsgf----fYsta~er------e~L~~~eR~Fi~~r~~kiie 273 (520)
T KOG0359|consen 222 VEDAYIL-----------------ICNVSLEY-EKPEINSGF----FYSTAEER------EVLVLAERKFIDQRVRKIIE 273 (520)
T ss_pred hhceEEE-----------------Eeeccccc-cccccccch----hccchhHH------HHHHHHHHHHHHHHHHHHHH
Confidence 9999999 66778888 556777665 54444333 22333344432 3556777
Q ss_pred HHHHHHhcCCCeEEEe-cCCChhhHHhHHhhhcccccceeeecCCCCcchhhhhhhhhHhhhCCeEeccCCCCCcccccC
Q psy14622 480 ALELANSKRKPLVILA-EDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATLQDLAVATGGIVFGDEASPVKLEDLQ 558 (788)
Q Consensus 480 ~Le~~~~~~rpLLIIA-edi~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~~~LeDiAilTGg~vis~~~~g~~l~~v~ 558 (788)
+-..++. +++|. .+|||..|..|.-+++ .|.+-- .+..||.+...|||..+. +++|++
T Consensus 274 lk~~vc~----fvvinqkGidp~sld~~a~~gI------laLRRA-----KRRNmERL~lacGG~a~n------svddLt 332 (520)
T KOG0359|consen 274 LKRKVCE----FVVINQKGIDPTSLDSLAKSGI------LALRRA-----KRRNMERLVLACGGEAVN------SVDDLT 332 (520)
T ss_pred Hhhhcce----EEEecccCCCCCcchhhhhcch------HHHHHH-----hhhhHHHHHHhhccceec------ccccCC
Confidence 7677665 88884 6999999999976643 222111 256799999999999886 569999
Q ss_pred cccccceeEE---EEecCceEEEcCCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHhhcCCeEEEEecCCchhhHH
Q psy14622 559 ATDLGSVGEI---VITKDDTLILKGKGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSEVEVN 635 (788)
Q Consensus 559 ~~~LG~a~~V---~vt~d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~~~~~~L~eRla~LsggvAvI~VGG~Te~Eik 635 (788)
+++||+|..| ++.++.+||+.+..+|.. ++|.+-|++..++-
T Consensus 333 p~~LG~aglVye~tlGEEkfTFIE~~~~p~S-----------------------------------~TiLikgpnkht~t 377 (520)
T KOG0359|consen 333 PDYLGYAGLVYEYTLGEEKFTFIEKCNNPSS-----------------------------------VTILIKGPNKHTIT 377 (520)
T ss_pred hhhccccceeEEeeccceeeEeeecCCCCcc-----------------------------------eEEEEeCCccchHH
Confidence 9999999999 689999999999988864 88999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhc-cccCCchhHhhHHHHhhhhhccCccccCCChhhHHHHHHHHHHHHHhhcChhHHHHHHH
Q psy14622 636 EKKDRVTDALNATRAAVEEG-IVPGGGTALLRCIAVLDKLETANADQATGKKEDIDRRADQIRDQIEATTSDYEREKLQE 714 (788)
Q Consensus 636 Erk~r~edAl~a~raA~e~G-iVpGGG~all~as~~L~~~~~~~~~~~~G~~~~i~~r~~~l~~~~~~~~~~~d~~~l~e 714 (788)
+-||-+.|+|+|++.+++.+ ++||+|+..+.++.+|...+. .-.| +.
T Consensus 378 Qikdairdglrav~ntl~d~~~i~Gaga~~va~~~~lr~~k~----~vkg------------------------ra---- 425 (520)
T KOG0359|consen 378 QIKDAIRDGLRAVKNTLEDKCGIPGAGAFEVALGRHLRESKK----SVKG------------------------RA---- 425 (520)
T ss_pred HHHHHHhhHHHHHHHHhhhcccccCchHHHHHHHHHHHHhhh----ccCc------------------------hh----
Confidence 99999999999999999996 999999999999988863221 1122 00
Q ss_pred HHHHhccCeEEEEecccHHHHHHHHhcchHHHHHHHhCCchHHHHHHHhcC--CCCeeEEcCCCcccchhhcCC
Q psy14622 715 RLARLASGVAVLKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVLES--SGEMGYDAMNNEYVNMIQKVL 786 (788)
Q Consensus 715 Rla~Lsggvavi~vGa~~~e~~e~~~r~~~a~~a~~Aa~e~g~Vv~~~~~~--~~~~Gyda~~~~~~dm~~~Gi 786 (788)
+.| ++..+.++-+..+..|.|+++|.--++-++.+. ..-.|.|+.+|+-.+....||
T Consensus 426 ------------~~g---~~afa~all~ipk~La~nsg~D~qe~l~~l~~e~~~~~~g~dl~~g~~~~~~~~gi 484 (520)
T KOG0359|consen 426 ------------YLG---VKAFANALLVIPKTLAKNSGLDEQETLVSLKKEHEVTLRGLDLFRGEECDPSRKGI 484 (520)
T ss_pred ------------hhh---HHHHHhhhhhhhHHHHHhcCCchHHHHHHHHHhhhhhhcccccccCCccchhhccc
Confidence 122 789999999999999999999998887777543 234699999999999988886
No 37
>KOG0356|consensus
Probab=100.00 E-value=7.3e-38 Score=347.03 Aligned_cols=394 Identities=27% Similarity=0.348 Sum_probs=274.2
Q ss_pred ccccccCCCccccccccceeecccccccC--c---cccccccc-ccc-cccceeecchhhhhhhhhhhhhhhhhhHHHhh
Q psy14622 229 YAKDVRFGPEVRGLMLQGVDILADAMYRL--P---RVLRSQNL-TPL-LRAKVEFQDALVLLSESKISSIQSIIPALELA 301 (788)
Q Consensus 229 ~~k~~~~~~~~r~~~L~~~~i~~~~~~~t--p---~v~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (788)
++|++.||.+.|..+|.++++|++++.+| | ||+++|+| +|. +||||||+++|+|++ +..|.++.+
T Consensus 15 ~ak~i~fg~~~r~~ll~Gv~~Ladav~~TlgpKgrnViieq~~gsPkvtkdgvTva~si~l~d-~~~n~gakl------- 86 (550)
T KOG0356|consen 15 YAKDIKFGKDVRAKLLQGVDLLADAVAVTLGPKGRNVIIEQSWGSPKVTKDGVTVAKSIELKD-KYENIGAKL------- 86 (550)
T ss_pred cccccccCHHHHHHHHhhHHHHHHHhhhhccCCcceEEcccccCCCceecCCceeeccccccc-hhhhhccHH-------
Confidence 99999999999999999999999999999 8 89999999 888 999999999999988 888999888
Q ss_pred hccCCcceeeccc--cCCcceeeEe---eecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhh
Q psy14622 302 NSKRKPLVILAED--VDGEALSTLV---VGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEV 376 (788)
Q Consensus 302 ~~~~~~~~~~~~~--~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (788)
..+++++.|+ ||||||+|+| |.+||+.+|.+|.||+.+.|||++|.++... +|++
T Consensus 87 ---vq~va~~tN~~agdGtttatvlar~i~~eg~~~v~~G~npv~irrGi~~av~~vv~-----------------~L~k 146 (550)
T KOG0356|consen 87 ---VQDVANNTNEEAGDGTTTATVLARAIAKEGFEKVAKGANPVEIRRGIMLAVDAVVD-----------------ELKK 146 (550)
T ss_pred ---HHHHHhhccCccccCcchHHHHHHHHHHHHHHHHhccCCchhhhhhHHHHHHHHHH-----------------HHHH
Confidence 4788888888 9999999999 9999999999999999999999999888777 9999
Q ss_pred hhhccccCCCCCchhhhhhhhhHHHHHHHHHHhhhccCCCCcEEEecCCccceeEEEEEeeEecccccccccccccCCce
Q psy14622 377 IEGMKFDRGYISPYFIIELKLVLEYYIQTYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFINTAKGAK 456 (788)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kvG~dGvItveeg~~~~~~lev~eG~~fd~GylSpyfvt~~e~~~ 456 (788)
+|+||.+.++|.+||+||+|||.++ ++++.+ ..-+-|. ..-+.+-+|-.+... +.-.|+|+
T Consensus 147 ~sk~Vtt~eeIaqVAtiSAngD~~i-g~li~~----------a~~kvG~--~GVItv~~gkt~~de------lev~eGmk 207 (550)
T KOG0356|consen 147 MSKPVTTPEEIAQVATISANGDKEI-GNLISD----------AMKKVGR--KGVITVKDGKTLEDE------LEVIEGMK 207 (550)
T ss_pred hCCCCCCHHHHHHHHhhhcCCcHHH-HHHHHH----------HHHHhCc--CCeEEeecCCccccc------hhhhhccc
Confidence 9999999999999999999999997 666666 1112222 223445555432211 12344442
Q ss_pred e--EeccceeecccccccchhhhHHHHHHHHhcCCCeEEEec-CCChhhHHhHHhhhcccccceeeecCCCCcchhhhhh
Q psy14622 457 V--EFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAE-DVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATL 533 (788)
Q Consensus 457 v--~l~~p~ILitD~kI~~i~~IlP~Le~~~~~~rpLLIIAe-di~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~~~L 533 (788)
. -|-.||..-+.++ . -++...|++++.+ +|+. ++.++- +...-.+-.-| |
T Consensus 208 fdrGyiSPyfi~~~k~-~-----------~~e~e~~~~ll~~kki~~--v~~ivp----~LE~A~~~~~P---------L 260 (550)
T KOG0356|consen 208 FDRGYISPYFITSSKK-Q-----------KVEFENALLLLSEKKISS--VQSIVP----ALELALAKRRP---------L 260 (550)
T ss_pred ccccccCccccccchh-h-----------hhhhhhhhhhhhhhhhhH--HHHHhH----HHHHhhhccCc---------e
Confidence 2 2344665443332 1 1222336666543 5542 222220 00000111112 1
Q ss_pred hhhHhhhCCeEeccCCCCCcccccCcccccceeEEEEecCceEEEcCCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHH
Q psy14622 534 QDLAVATGGIVFGDEASPVKLEDLQATDLGSVGEIVITKDDTLILKGKGKKEDIDRRADQIRDQIEATTSDYEREKLQER 613 (788)
Q Consensus 534 eDiAilTGg~vis~~~~g~~l~~v~~~~LG~a~~V~vt~d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~~~~~~L~eR 613 (788)
..|+++..+..|..+-++.|-.--+|+.=+ ..|.|+ .|.++ -.+
T Consensus 261 ---------liIAeDi~~eaL~tLIlNkLk~glqV~AvK-----apgfGd-----nrk~~-----------------l~D 304 (550)
T KOG0356|consen 261 ---------LIIAEDIDGEALATLVLNKLKGGLQVVAVK-----APGFGD-----NRKNL-----------------LKD 304 (550)
T ss_pred ---------EEEehhcchhHHHHHHhhhhccceeEEEEe-----cCCCcc-----hHHHh-----------------hhH
Confidence 356677666666666665554444444321 234444 33333 345
Q ss_pred HHhhcCCeEEEEecCCchhhHHHHHHHHHHHHHHHHHHHHhccccCCchhHhhHHHHhhhhhc-c--CccccCCChhhHH
Q psy14622 614 LARLASGVAVLKVGGSSEVEVNEKKDRVTDALNATRAAVEEGIVPGGGTALLRCIAVLDKLET-A--NADQATGKKEDID 690 (788)
Q Consensus 614 la~LsggvAvI~VGG~Te~EikErk~r~edAl~a~raA~e~GiVpGGG~all~as~~L~~~~~-~--~~~~~~G~~~~i~ 690 (788)
|+-|+|+.. .|. |+. ...+|+ +.+-+.-...+..-+ + --=.+.|+++++.
T Consensus 305 iai~Tg~~v---~~~----e~~--~l~le~------------------~~~~dLG~~~evvvtkd~t~ll~g~~~~~~v~ 357 (550)
T KOG0356|consen 305 IAILTGATV---FGE----ELS--TLNLED------------------AKLEDLGEVGEVVVTKDDTMLLKGKGNKAQVE 357 (550)
T ss_pred HHHHhhhhh---hcc----chh--hccccc------------------CchhhcCcceeEEEecCcceeeCCCCCHHHHH
Confidence 666666421 111 111 000000 000000000000000 0 0124678999999
Q ss_pred HHHHHHHHHHHhhcChhHHHHHHHHHHHhccCeEEEEecccH-HHHHHHHhcchHHHHHHHhCCchHHHH
Q psy14622 691 RRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSS-VEIVKKALRQPCMTIATNAGVDASVVV 759 (788)
Q Consensus 691 ~r~~~l~~~~~~~~~~~d~~~l~eRla~Lsggvavi~vGa~~-~e~~e~~~r~~~a~~a~~Aa~e~g~Vv 759 (788)
.|++|++..++.++++|++++|+||+++||||+|||+|||++ +|+.||++|++|++||++||+++|+|.
T Consensus 358 ~rIeqik~~~e~t~~~ye~ekl~er~a~ls~gvavi~vGg~se~Ev~ekk~rv~dalnat~aaveeGivp 427 (550)
T KOG0356|consen 358 GRIEQIKEMIEETTSDYEKEKLNERLAKLSGGVAVIKVGGHSEVEVNEKKDRVEDALNATRAAVEEGIVP 427 (550)
T ss_pred HHHHHHHHHHHhhhhhhhHhHHHHHHHHhcCCeEEEEecCcchhhhhhhhhhHHHHHHHHHHHhhcCccc
Confidence 999999999999999999999999999999999999999998 999999999999999999999999983
No 38
>KOG0360|consensus
Probab=100.00 E-value=2.4e-35 Score=321.33 Aligned_cols=432 Identities=25% Similarity=0.350 Sum_probs=328.3
Q ss_pred eeccCCCCCcCCCCceeeeecCCCCceEeeChHHhhccccccccccChhhHHHHHHhhhcccccCCCchhHHHHHHHHHH
Q psy14622 7 EQSWGSPKITKDDGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIAK 86 (788)
Q Consensus 7 ~~~~~S~kiLGPkG~nkmI~~~~G~~~ITnDGvTIlk~I~l~d~~ehpgAkLl~e~A~~qd~evGDGTTTavVLA~aLL~ 86 (788)
+.-.+|+ |||-|+|||++|.+|...+||||+||++.++++ ||++|++.+.+..||.++|||||+++++|++|++
T Consensus 32 ~nivkss--~GPvGldKmlvdd~Gdvt~TndgAtiL~~l~V~----HPa~KiLvelaq~qd~evgDgttsvviia~eLl~ 105 (545)
T KOG0360|consen 32 ANIVKSS--LGPVGLDKMLVDDIGDVTITNDGATILSLLEVE----HPAAKVLVELAQLQDEEVGDGTTSVVIIAAELLK 105 (545)
T ss_pred HHHHHhc--cCccchhhhccccccceEEeccHHHHHHhhhhc----chHHHHHHHHHHhccccccCCceEEEEEEHHhhh
Confidence 3457899 999999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCchhHHHHHHHHHHHHHHHHHh-cCCCCC--CHHHHHHHHHhccCCc------hHHhhHHHHHHHHhhhc
Q psy14622 87 EGFEKISKGANPIEIRRGVMLAVETIKTHLKE-LSKPVT--TPEEIAQVATISANGD------KAVGELISDAMKRVSAK 157 (788)
Q Consensus 87 eglklI~~Gi~P~~I~~Gi~~A~~~ile~L~~-ls~~V~--d~eeL~~VA~tSan~d------~~Ig~LIadAv~kV~~~ 157 (788)
++-+++..++||+.++.||..|...+++++.+ ++.|++ ..+-|.+++++|++++ +++++++++|+..+
T Consensus 106 ~a~~Lv~~~ihpt~ii~gyr~ac~e~~k~i~~~~~~~vd~lg~~~Lin~~ktsmsSK~i~~ds~~f~~~Vvda~l~v--- 182 (545)
T KOG0360|consen 106 NADELVKTKIHPTRIISGYRLACIEAVKYITEGLSKPVDSLGTQILINLAKTSMSSKIIGMDSDFFTEMVVDALLAV--- 182 (545)
T ss_pred hHHHhhcCCCcceehhhhHHHHHHHHHHHhhccceeehhhcchHHHHHHHHhhhcceecccchHHHHHHHHHHHHHH---
Confidence 99999999999999999999999999999876 567776 5788999999999886 68999999999873
Q ss_pred cccccceeeeccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhcccccccccccccccccCCC
Q psy14622 158 VEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRFGP 237 (788)
Q Consensus 158 ~e~~d~~ILite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~~~~~ 237 (788)
+++ ..+++| .||
T Consensus 183 ------~~~-------------------~~~ge~-----------------------------~yp-------------- 194 (545)
T KOG0360|consen 183 ------KIL-------------------DINGEP-----------------------------HYP-------------- 194 (545)
T ss_pred ------hhc-------------------ccCCce-----------------------------ecc--------------
Confidence 000 001111 111
Q ss_pred ccccccccceeecccccccCcccccccccccccccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeeccccCC
Q psy14622 238 EVRGLMLQGVDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDG 317 (788)
Q Consensus 238 ~~r~~~L~~~~i~~~~~~~tp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 317 (788)
+..+.|
T Consensus 195 ------i~~vnI-------------------------------------------------------------------- 200 (545)
T KOG0360|consen 195 ------INSVNI-------------------------------------------------------------------- 200 (545)
T ss_pred ------ccceeE--------------------------------------------------------------------
Confidence 011111
Q ss_pred cceeeEeeecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccccCCCCCchhhhhhhh
Q psy14622 318 EALSTLVVGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFIIELKL 397 (788)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (788)
||
T Consensus 201 ------------------------------------Lk------------------------------------------ 202 (545)
T KOG0360|consen 201 ------------------------------------LK------------------------------------------ 202 (545)
T ss_pred ------------------------------------Ee------------------------------------------
Confidence 00
Q ss_pred hHHHHHHHHHHhhhccCCCCcEEEecCCccceeEEEEEeeEecccccccccccccCCceeEecc------------ceee
Q psy14622 398 VLEYYIQTYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQD------------ALVL 465 (788)
Q Consensus 398 ~~~~~~~~~~~~~~kvG~dGvItveeg~~~~~~lev~eG~~fd~GylSpyfvt~~e~~~v~l~~------------p~IL 465 (788)
-.|+...++ -++.|+.++....|..|...-.+.++.+-+ ..++
T Consensus 203 ------------------------ahG~s~~eS-~l~~GyaLnc~~asq~m~~~i~~~Kiacld~~Lqk~km~lGv~vvv 257 (545)
T KOG0360|consen 203 ------------------------AHGKSQIES-MLLPGYALNCSVASQMMPLRIKNAKIACLDFTLQKTKMKLGVQVVV 257 (545)
T ss_pred ------------------------cCCccchhh-eeecceeeeccHhhhccccccccceeeeEecccccccccccceEEE
Confidence 012222222 245787777777777774433333322211 1222
Q ss_pred cccccccchhh-----hHHHHHHHHhcCCCeEEEecCCChhhHHhHHhhhcccccceeeecCCCCcchhhhhhhhhHhhh
Q psy14622 466 LSESKISSIQS-----IIPALELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATLQDLAVAT 540 (788)
Q Consensus 466 itD~kI~~i~~-----IlP~Le~~~~~~rpLLIIAedi~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~~~LeDiAilT 540 (788)
....++..+.+ ...-++++...+..+++.++.||+.++..|+-...-+.++| +++.|+.||..|
T Consensus 258 ~dp~kle~ir~~e~~itkeRi~kIl~~ganvVLtt~gIddmc~K~~veagamAVrR~-----------~k~dlk~iakat 326 (545)
T KOG0360|consen 258 DDPEKLEQIRQREQDITKERIKKILATGANVVLTTGGIDDMCLKYFVEAGAMAVRRC-----------KKEDLKRIAKAT 326 (545)
T ss_pred cChHHHHHHHHHHhHhHHHHHHHHHhcCCcEEEEcCCccHHHHHHHHHcchhhhHHH-----------HHHHHHHHHHhh
Confidence 23334444332 12233455578899999999999999999997755444444 588999999999
Q ss_pred CCeEeccCCCCCcccccCcccccceeEEE---EecCceEEEcCCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHhh
Q psy14622 541 GGIVFGDEASPVKLEDLQATDLGSVGEIV---ITKDDTLILKGKGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARL 617 (788)
Q Consensus 541 Gg~vis~~~~g~~l~~v~~~~LG~a~~V~---vt~d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~~~~~~L~eRla~L 617 (788)
|+++++.-..-..-+++++.+||+|+.|+ +..|+++++.|....
T Consensus 327 Gat~~sSla~l~geetf~~~~lG~a~evvqeri~dde~ilikg~ka~--------------------------------- 373 (545)
T KOG0360|consen 327 GATLLSSLANLEGEETFEPASLGSADEVVQERIGDDELILIKGTKAT--------------------------------- 373 (545)
T ss_pred CCeeeehhhccccccccChhhccchhHHHHHhcccceeEEeccCccc---------------------------------
Confidence 99999876434455788999999999994 889999999985332
Q ss_pred cCCeEEEEecCCchhhHHHHHHHHHHHHHHHHHHHHhc-cccCCchhHhhHHHHhhhhhccCccccCCChhhHHHHHHHH
Q psy14622 618 ASGVAVLKVGGSSEVEVNEKKDRVTDALNATRAAVEEG-IVPGGGTALLRCIAVLDKLETANADQATGKKEDIDRRADQI 696 (788)
Q Consensus 618 sggvAvI~VGG~Te~EikErk~r~edAl~a~raA~e~G-iVpGGG~all~as~~L~~~~~~~~~~~~G~~~~i~~r~~~l 696 (788)
+|-|-.-|++++-++|.+.-+.|||+.+|..+|++ +|||||+...+.+-+|+...+ ..|+.+
T Consensus 374 ---~aSiILrgaNd~~~DEmers~hdaL~VlkrtLes~~vvpGGG~vE~aLs~yle~~a~-----s~~srE--------- 436 (545)
T KOG0360|consen 374 ---SASIILRGANDFMLDEMERSLHDALCVLKRTLESKSVVPGGGAVETALSIYLENFAT-----SVGSRE--------- 436 (545)
T ss_pred ---eeeEEEecCCcccHhhhccchhhHHHHHHHHhccCccccCccHHHHHHHHHHHhhcc-----cCccHH---------
Confidence 36788999999999999999999999999999997 999999999888888876543 223211
Q ss_pred HHHHHhhcChhHHHHHHHHHHHhccCeEEEEecccHHHHHHHHhcchHHHHHHHhCCchHHHHHHHhcC-------C---
Q psy14622 697 RDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVLES-------S--- 766 (788)
Q Consensus 697 ~~~~~~~~~~~d~~~l~eRla~Lsggvavi~vGa~~~e~~e~~~r~~~a~~a~~Aa~e~g~Vv~~~~~~-------~--- 766 (788)
|+.. .|.- .++-......|.|||.+.+..+.+++.. +
T Consensus 437 --~lai------------------------------aefa-~all~ipktla~naa~Dstelvt~lra~Hs~~q~~p~~~ 483 (545)
T KOG0360|consen 437 --QLAI------------------------------AEFA-AALLSIPKTLAVNAAKDSTELVTKLRAYHSVSQDNPWRL 483 (545)
T ss_pred --HHHH------------------------------HHHH-HHHhcchHHHhhhhccccccccccccCCchhhccCCccc
Confidence 1111 3333 4777888899999999999999998742 1
Q ss_pred --CCeeEEcCCCcccchhhcCC
Q psy14622 767 --GEMGYDAMNNEYVNMIQKVL 786 (788)
Q Consensus 767 --~~~Gyda~~~~~~dm~~~Gi 786 (788)
..+|.|.-+|+++|.+++|+
T Consensus 484 ~~k~~GldL~ng~~~dn~~~g~ 505 (545)
T KOG0360|consen 484 LLKQYGLDLINGKIRDNKSAGS 505 (545)
T ss_pred cchhhCccccccEeecceeeee
Confidence 24699999999999999985
No 39
>KOG0363|consensus
Probab=100.00 E-value=4.2e-35 Score=311.13 Aligned_cols=437 Identities=26% Similarity=0.372 Sum_probs=305.4
Q ss_pred EEeeccCCCCCcCCCCceeeeec--CCCCceEeeChHHhhccccccccccChhhHHHHHHhhhcccccCCCchhHHHHHH
Q psy14622 5 ILEQSWGSPKITKDDGRNVILEQ--SWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLAR 82 (788)
Q Consensus 5 ~i~~~~~S~kiLGPkG~nkmI~~--~~G~~~ITnDGvTIlk~I~l~d~~ehpgAkLl~e~A~~qd~evGDGTTTavVLA~ 82 (788)
.|.++++|. |||+||+|+|.. +.|...|||||+||+|++.+. ||+||+++++|.-||+++||||||++|||.
T Consensus 29 aigDlvKsT--LGPKGMdKiL~s~~~~~~v~VTNDGAtILksi~vD----npaAkvLv~~S~vQD~EvGDGTTSV~vlaa 102 (527)
T KOG0363|consen 29 AIGDLVKST--LGPKGMDKILQSTGRAGTVMVTNDGATILKSIGVD----NPAAKVLVDISKVQDDEVGDGTTSVTVLAA 102 (527)
T ss_pred HHHHHHHhc--cCcchHHHHHhccCCCCceEEecchHHHHHhcCCC----CchhhheeccccccccccCCCceehHHHHH
Confidence 356889999 999999999984 357799999999999999999 999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhcCCCCC-C----HHHHHHHHHhccCCc------hHHhhHHHHHH
Q psy14622 83 AIAKEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVT-T----PEEIAQVATISANGD------KAVGELISDAM 151 (788)
Q Consensus 83 aLL~eglklI~~Gi~P~~I~~Gi~~A~~~ile~L~~ls~~V~-d----~eeL~~VA~tSan~d------~~Ig~LIadAv 151 (788)
+|++++.+++.+.+||+.|++||+.|...+.+.|.+.+..-+ + +++|.++|+|.+.++ +.|+++.++|+
T Consensus 103 eLlreAeklv~~kiHPq~Ii~GyR~A~~~a~eaL~~~s~dns~~~~kfr~DLl~iarTTL~SKiLsq~kehFaelavdAV 182 (527)
T KOG0363|consen 103 ELLREAEKLVNQKIHPQTIISGYRMATAAALEALTKSSIDNSSDKEKFREDLLKIARTTLSSKILSQDKEHFAELAVDAV 182 (527)
T ss_pred HHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHhhhhccCchHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 999999999999999999999999999999999998887643 2 689999999999885 68999999999
Q ss_pred HHhhhccccccceeeeccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhcccccccccc--cc
Q psy14622 152 KRVSAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRR--AY 229 (788)
Q Consensus 152 ~kV~~~~e~~d~~ILite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~--~~ 229 (788)
.+..+...+ ..||= -+.-.+..=+ +.|+. -+
T Consensus 183 ~rLkGs~nL------------~~IqI------------------IK~~Gg~l~d-----------------SfLDeGFlL 215 (527)
T KOG0363|consen 183 LRLKGSTNL------------EAIQI------------------IKKLGGKLED-----------------SFLDEGFLL 215 (527)
T ss_pred HHhcCCCCc------------cceee------------------ehhcCCcccc-----------------cccccccee
Confidence 985321111 11110 0111111000 00111 12
Q ss_pred cccccCCCccccccccceeecccccccCcccccccccccccccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcce
Q psy14622 230 AKDVRFGPEVRGLMLQGVDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLV 309 (788)
Q Consensus 230 ~k~~~~~~~~r~~~L~~~~i~~~~~~~tp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (788)
.|.+..++..| + .+|++|+- -||+--|+|+|--+.+--+
T Consensus 216 ~K~igv~qpkr---i-----------ena~iLIA--NT~mDtDKvKvfGarvrVd------------------------- 254 (527)
T KOG0363|consen 216 DKKIGVNQPKR---I-----------ENAKILIA--NTPMDTDKVKVFGARVRVD------------------------- 254 (527)
T ss_pred ccccCCCCccc---c-----------cccceEEe--cCCCcccceeeecceEeec-------------------------
Confidence 33333332111 1 11233331 1666667777654421111
Q ss_pred eeccccCCcceeeEeeecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccccCCCCCc
Q psy14622 310 ILAEDVDGEALSTLVVGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISP 389 (788)
Q Consensus 310 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (788)
-+.-..-+++|-..- |.++++
T Consensus 255 -----------------------------s~~klaelE~AEkeK----------------mK~KV~-------------- 275 (527)
T KOG0363|consen 255 -----------------------------STAKLAELEKAEKEK----------------MKEKVE-------------- 275 (527)
T ss_pred -----------------------------chhHHHHHHHHHHHH----------------HHHHHH--------------
Confidence 111122233331000 111111
Q ss_pred hhhhhhhhhHHHHHHHHHHhhhccCCCCcEEEecCCccceeEEEEEeeEecccccccccccccCCceeEeccceeecccc
Q psy14622 390 YFIIELKLVLEYYIQTYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSES 469 (788)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~kvG~dGvItveeg~~~~~~lev~eG~~fd~GylSpyfvt~~e~~~v~l~~p~ILitD~ 469 (788)
|+-..| .+ -|+ ++...|.-|--|+.|.
T Consensus 276 ----------------------kI~~hg---------iN------------------~Fi----NRQLiYnyPeqLf~da 302 (527)
T KOG0363|consen 276 ----------------------KILKHG---------IN------------------VFI----NRQLIYNYPEQLFADA 302 (527)
T ss_pred ----------------------HHHhcC---------Cc------------------EEe----ehhHhhcCHHHHHhhc
Confidence 111111 11 011 1222444455566665
Q ss_pred cccchhhhHHHHHHHHhcCCCeEEEecCCChhhHHhHHhhhcccccceeeecCCCCcchhhhhhhhhHhhhCCeEeccCC
Q psy14622 470 KISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATLQDLAVATGGIVFGDEA 549 (788)
Q Consensus 470 kI~~i~~IlP~Le~~~~~~rpLLIIAedi~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~~~LeDiAilTGg~vis~~~ 549 (788)
.|-.+ |+ -|++| .|.+|..|||.+.|
T Consensus 303 gi~aI-------EH------------ADFdG--------------------------------iERLalvtGGeI~S--- 328 (527)
T KOG0363|consen 303 GIMAI-------EH------------ADFDG--------------------------------IERLALVTGGEIVS--- 328 (527)
T ss_pred Cccee-------ec------------ccchh--------------------------------HHHHhhcccceeee---
Confidence 54333 12 25554 78999999999998
Q ss_pred CCCcccccCcccccceeEE---EEecCceEEEcCCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHhhcCCeEEEEe
Q psy14622 550 SPVKLEDLQATDLGSVGEI---VITKDDTLILKGKGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKV 626 (788)
Q Consensus 550 ~g~~l~~v~~~~LG~a~~V---~vt~d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~~~~~~L~eRla~LsggvAvI~V 626 (788)
++++.+...||+|+.+ .+.+|..+=+.|...- --.+|-.
T Consensus 329 ---TFd~p~~~klG~C~~IeeimiGed~li~FSGv~~G-----------------------------------eActIVl 370 (527)
T KOG0363|consen 329 ---TFDNPELVKLGECDLIEEIMIGEDKLIKFSGVKLG-----------------------------------EACTIVL 370 (527)
T ss_pred ---ccCCcchhccccchhhHHHhcCccceeeecccccc-----------------------------------cceEEEE
Confidence 5578888899999887 4778877777775332 2378999
Q ss_pred cCCchhhHHHHHHHHHHHHHHHHHHHHh-ccccCCchhHhhHHHHhhhhhccCccccCCChhhHHHHHHHHHHHHHhhcC
Q psy14622 627 GGSSEVEVNEKKDRVTDALNATRAAVEE-GIVPGGGTALLRCIAVLDKLETANADQATGKKEDIDRRADQIRDQIEATTS 705 (788)
Q Consensus 627 GG~Te~EikErk~r~edAl~a~raA~e~-GiVpGGG~all~as~~L~~~~~~~~~~~~G~~~~i~~r~~~l~~~~~~~~~ 705 (788)
.|+|..-++|-...+.|||+..-.-+++ -+|.|||++..-.+..+++.... -.|++ ++
T Consensus 371 rGat~q~LDEaeRslHDALcVLaqtv~esrvv~GgG~sEm~Ma~av~~~A~~----~pGke-a~---------------- 429 (527)
T KOG0363|consen 371 RGATQQILDEAERSLHDALCVLAQTVKESRVVLGGGCSEMLMAKAVDKEAQE----TPGKE-AL---------------- 429 (527)
T ss_pred ecccHHHHHHHHHHHHHHHHHHHHHhccceeeecCCcHHHHHHHHHHHHHhh----CCchh-hH----------------
Confidence 9999999999999999999999888887 69999999998888887654321 23321 00
Q ss_pred hhHHHHHHHHHHHhccCeEEEEecccHHHHHHHHhcchHHHHHHHhCCchHHHHHHHhcC----CCCeeEEcCCCcccch
Q psy14622 706 DYEREKLQERLARLASGVAVLKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVLES----SGEMGYDAMNNEYVNM 781 (788)
Q Consensus 706 ~~d~~~l~eRla~Lsggvavi~vGa~~~e~~e~~~r~~~a~~a~~Aa~e~g~Vv~~~~~~----~~~~Gyda~~~~~~dm 781 (788)
-++-..|+++.-+..+|.|||++..-.+.+++.. ...+|.|..+|+.+||
T Consensus 430 --------------------------AieAfarAL~qlPtiiaDNaG~dsaelva~Lra~h~~g~~t~Gld~~~G~i~dm 483 (527)
T KOG0363|consen 430 --------------------------AIEAFARALRQLPTIIADNAGYDSAELVAQLRAEHYNGRTTMGLDVRNGEIGDM 483 (527)
T ss_pred --------------------------HHHHHHHHHHhcchhhhccCCCCHHHHHHHHHHHhhcCCcccccccccCchhhH
Confidence 0777889999999999999999999999999752 2578999999999999
Q ss_pred hhcCC
Q psy14622 782 IQKVL 786 (788)
Q Consensus 782 ~~~Gi 786 (788)
-+.||
T Consensus 484 ~~~Gi 488 (527)
T KOG0363|consen 484 RELGI 488 (527)
T ss_pred HHhhh
Confidence 99997
No 40
>KOG0361|consensus
Probab=100.00 E-value=3.1e-34 Score=306.20 Aligned_cols=417 Identities=22% Similarity=0.341 Sum_probs=311.4
Q ss_pred EeeccCCCCCcCCCCceeeeecCCCCceEeeChHHhhccccccccccChhhHHHHHHhhhcccccCCCchhHHHHHHHHH
Q psy14622 6 LEQSWGSPKITKDDGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIA 85 (788)
Q Consensus 6 i~~~~~S~kiLGPkG~nkmI~~~~G~~~ITnDGvTIlk~I~l~d~~ehpgAkLl~e~A~~qd~evGDGTTTavVLA~aLL 85 (788)
|.+.++|. |||+||+|+|++..|+.+|+|||+||+|-+++. ||+|+.++++|.+||.++||||||+|+||.+++
T Consensus 32 v~e~~rtT--LGP~GmDkLivd~~g~~tIsNDGATIlKlldiv----hPaaktlVdia~sQDaEVGDGTTSVv~la~E~l 105 (543)
T KOG0361|consen 32 VAEALRTT--LGPRGMDKLIVDSKGKTTISNDGATILKLLDIV----HPAAKTLVDIARSQDAEVGDGTTSVVLLAAEFL 105 (543)
T ss_pred HHHHHHhc--cCccccceeeecCCCcEEEecCcHHHHHHHhhc----ChhHHHHHHHHhhccccccCCceeEeeeHHHHH
Confidence 45667888 999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhcCCCCC--C----HHHHHHHHHhccCCc------hHHhhHHHHHHHH
Q psy14622 86 KEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVT--T----PEEIAQVATISANGD------KAVGELISDAMKR 153 (788)
Q Consensus 86 ~eglklI~~Gi~P~~I~~Gi~~A~~~ile~L~~ls~~V~--d----~eeL~~VA~tSan~d------~~Ig~LIadAv~k 153 (788)
++...+++.|+||..|+++|++|...+++.+++++..++ + ++-|.++|.|+++++ ++|++|++||+..
T Consensus 106 k~~Kpfiedgv~~~~iir~~rka~~l~v~ki~elav~i~~~~~~~~r~lL~KcA~T~lsSKlI~~ek~fF~~MvVDAV~~ 185 (543)
T KOG0361|consen 106 KEAKPFIEDGVHPQLIIRAYRKARQLAVEKIKELAVEIDGSSKTELRELLEKCAATALSSKLIRQEKEFFAKMVVDAVLT 185 (543)
T ss_pred HhhhhHhhcCCCHHHHHHHHHHHHHHHHHHHHHheeEecccchhhHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999998876 2 567999999999885 7999999999987
Q ss_pred hhhccccccceeeeccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhcccccccccccccccc
Q psy14622 154 VSAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDV 233 (788)
Q Consensus 154 V~~~~e~~d~~ILite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~ 233 (788)
..+ .
T Consensus 186 ld~----------------------------------------------------------~------------------ 189 (543)
T KOG0361|consen 186 LDN----------------------------------------------------------D------------------ 189 (543)
T ss_pred hcc----------------------------------------------------------c------------------
Confidence 200 0
Q ss_pred cCCCccccccccceeecccccccCcccccccccccccccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeecc
Q psy14622 234 RFGPEVRGLMLQGVDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAE 313 (788)
Q Consensus 234 ~~~~~~r~~~L~~~~i~~~~~~~tp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (788)
.+++++
T Consensus 190 --------l~~~mI------------------------------------------------------------------ 195 (543)
T KOG0361|consen 190 --------LDLNMI------------------------------------------------------------------ 195 (543)
T ss_pred --------cchhhc------------------------------------------------------------------
Confidence 001111
Q ss_pred ccCCcceeeEeeecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccccCCCCCchhhh
Q psy14622 314 DVDGEALSTLVVGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFII 393 (788)
Q Consensus 314 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (788)
|+++|..|
T Consensus 196 ---------------GIKKV~GG--------------------------------------------------------- 203 (543)
T KOG0361|consen 196 ---------------GIKKVPGG--------------------------------------------------------- 203 (543)
T ss_pred ---------------ceeecCCC---------------------------------------------------------
Confidence 34444333
Q ss_pred hhhhhHHHHHHHHHHhhhccCCCCcEEEecCCccceeEEEEEeeEecccccccccccccCCceeEeccceeeccccccc-
Q psy14622 394 ELKLVLEYYIQTYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESKIS- 472 (788)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~kvG~dGvItveeg~~~~~~lev~eG~~fd~GylSpyfvt~~e~~~v~l~~p~ILitD~kI~- 472 (788)
.+++++ ++.|..|.+-|--.-|=.-|+ .|.||.||+.+-.++
T Consensus 204 --------------------------------~~~dS~-lv~GVAFkKtFsYAGfEqqPK----k~~NpkIl~LnvELEl 246 (543)
T KOG0361|consen 204 --------------------------------AMEDSL-LVNGVAFKKTFSYAGFEQQPK----KFLNPKILLLNVELEL 246 (543)
T ss_pred --------------------------------ccchhh-hccceeeeehccccchhhCcc----ccCCceEEEEeeeeee
Confidence 233333 457888876665333422222 567787776654432
Q ss_pred ------------chhh-----------hHHHHHHHHhcCCCeEEEecCCChhhHHhHHhhhcccccceeeecCCCCcchh
Q psy14622 473 ------------SIQS-----------IIPALELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNR 529 (788)
Q Consensus 473 ------------~i~~-----------IlP~Le~~~~~~rpLLIIAedi~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R 529 (788)
++++ |-.=|+.+..++...++=-=-|-.-|-+.+.-.. -+||=+-|
T Consensus 247 KaEkdNAEiRv~~v~eyQ~iVDAEW~Ii~~KL~ki~~sGAnVVLSkLpIGD~ATQyFAdrd-----iFCAGRV~------ 315 (543)
T KOG0361|consen 247 KAEKDNAEIRVDNVEEYQAIVDAEWNIIYDKLDKIHESGANVVLSKLPIGDLATQYFADRD-----IFCAGRVP------ 315 (543)
T ss_pred cccccCceeecCCHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEecccchHHHHHHhhccC-----ceecCcCC------
Confidence 2222 3334566666666655443345444555554221 24555555
Q ss_pred hhhhhhhHhhhCCeEeccCCCCCcccccCcccccceeEE---EEecCceEEEcCCCCHHHHHHHHHHHHHHHHhcCChHH
Q psy14622 530 KATLQDLAVATGGIVFGDEASPVKLEDLQATDLGSVGEI---VITKDDTLILKGKGKKEDIDRRADQIRDQIEATTSDYE 606 (788)
Q Consensus 530 ~~~LeDiAilTGg~vis~~~~g~~l~~v~~~~LG~a~~V---~vt~d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~~~ 606 (788)
.+-|....-.|||.+.+ +..++..+.||.|... .+..+++-++.|++...
T Consensus 316 ~eDl~Rv~~acGGsi~t------t~~~i~~~~LG~C~~FeE~QvG~eRyN~Fegcp~ak--------------------- 368 (543)
T KOG0361|consen 316 EEDLNRVMQACGGSIQT------TVSDIKEEVLGTCALFEERQVGGERYNLFEGCPKAK--------------------- 368 (543)
T ss_pred HHHHHHHHHhcCcchhh------hhhhcchhhcchhhhHHHHhhcchhhhhhcCCCccc---------------------
Confidence 56677788888888776 3467788999999876 37777777777765432
Q ss_pred HHHHHHHHHhhcCCeEEEEecCCchhhHHHHHHHHHHHHHHHHHHHHh-ccccCCchhHhhHHHHhhhhhccCccccCCC
Q psy14622 607 REKLQERLARLASGVAVLKVGGSSEVEVNEKKDRVTDALNATRAAVEE-GIVPGGGTALLRCIAVLDKLETANADQATGK 685 (788)
Q Consensus 607 ~~~L~eRla~LsggvAvI~VGG~Te~EikErk~r~edAl~a~raA~e~-GiVpGGG~all~as~~L~~~~~~~~~~~~G~ 685 (788)
.+++-..|.-|.-+.|--..+.||+.-+|.|+.. -+|+|||+.....|+.|...... -.|+
T Consensus 369 --------------tcTliLRGgaeqfieE~eRSlHDAImIVrralkn~~vVaGGGaiEMElSk~lRd~S~t----i~gK 430 (543)
T KOG0361|consen 369 --------------TCTLILRGGAEQFIEETERSLHDAIMIVRRALKNDSVVAGGGAIEMELSKYLRDYSRT----IAGK 430 (543)
T ss_pred --------------eeEEEEeccHHHHHHHHhhhhhhHHHHHHHHhccCcEeeCCceeeehHHHHHHHhhcc----cCcH
Confidence 3566666666667788889999999999999998 59999999999999988653211 1221
Q ss_pred hhhHHHHHHHHHHHHHhhcChhHHHHHHHHHHHhccCeEEEEecccHHHHHHHHhcchHHHHHHHhCCchHHHHHHHhcC
Q psy14622 686 KEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVLES 765 (788)
Q Consensus 686 ~~~i~~r~~~l~~~~~~~~~~~d~~~l~eRla~Lsggvavi~vGa~~~e~~e~~~r~~~a~~a~~Aa~e~g~Vv~~~~~~ 765 (788)
. |+= +.-..+++.+..++.+.|||.+.--++++++..
T Consensus 431 ~------------q~~-------------------------------i~A~akalEvIPrqLc~NaGfDa~~ilnkLR~r 467 (543)
T KOG0361|consen 431 Q------------QLF-------------------------------INAYAKALEVIPRQLCDNAGFDATNILNKLRQR 467 (543)
T ss_pred H------------HHH-------------------------------HHHHHHHHHHhHHHHhhhcCCcHHHHHHHHHHH
Confidence 0 000 455678899999999999999999999999742
Q ss_pred ---C-CCeeEEcCCCcccchhhcCC
Q psy14622 766 ---S-GEMGYDAMNNEYVNMIQKVL 786 (788)
Q Consensus 766 ---~-~~~Gyda~~~~~~dm~~~Gi 786 (788)
+ .-+|.|-.+.-..|+++++|
T Consensus 468 HA~G~~w~Gvdi~~e~i~dn~~~~V 492 (543)
T KOG0361|consen 468 HAQGEKWYGVDINTEGIADNFEKFV 492 (543)
T ss_pred hhcCCceeeeeecccchhhHHHhhc
Confidence 2 34699999999999999875
No 41
>KOG0362|consensus
Probab=99.96 E-value=3.9e-28 Score=266.64 Aligned_cols=417 Identities=20% Similarity=0.293 Sum_probs=296.3
Q ss_pred eeccCCCCCcCCCCceeeeecCCCCceEeeChHHhhccccccccccChhhHHHHHHhhhcccccCCCchhHHHHHHHHHH
Q psy14622 7 EQSWGSPKITKDDGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIAK 86 (788)
Q Consensus 7 ~~~~~S~kiLGPkG~nkmI~~~~G~~~ITnDGvTIlk~I~l~d~~ehpgAkLl~e~A~~qd~evGDGTTTavVLA~aLL~ 86 (788)
.+..+|+ |||+|||||++|+.|+..+|||..||+++++++ ||+|||+++++++|+++.||||+++++||++||+
T Consensus 39 a~~~rs~--yGpng~nK~vvnh~~k~~~TndaatIlrelev~----HPaakllv~a~~~q~~~iGDgtnfvvvla~~LLe 112 (537)
T KOG0362|consen 39 ANVIRSA--YGPNGRNKMVVNHLGKTFVTNDAATILRELEVE----HPAAKLLVEATQMQEEEIGDGTNFVVVLAGALLE 112 (537)
T ss_pred HHHHHhh--cCCCCcceeeecccceEEEcCChHHHHHHhhcc----CcHHHHHHHHHHHHHHhhCCCceEeehhHHHHHH
Confidence 3567899 999999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhcCCC-CCCHHHHHHHHHhccCCc-----hHHhhHHHHHHHHhhhcccc
Q psy14622 87 EGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKP-VTTPEEIAQVATISANGD-----KAVGELISDAMKRVSAKVEF 160 (788)
Q Consensus 87 eglklI~~Gi~P~~I~~Gi~~A~~~ile~L~~ls~~-V~d~eeL~~VA~tSan~d-----~~Ig~LIadAv~kV~~~~e~ 160 (788)
++.++|..|++|.+|+.||+.|.+.+++.|.++... +.+.++...+++++++++ +++.+++++|+..+.+.
T Consensus 113 ~Ae~li~~Gl~~~ei~~gy~~A~~~~~e~l~~lv~~~~~d~~d~~~~~rs~i~skq~~~ed~l~~lVa~ac~si~p~--- 189 (537)
T KOG0362|consen 113 QAEELIRMGLTPAEISEGYETATKEALEILPELVVQSIGDLEDKEWALRSVIMSKQYGNEDFLTKLVAKACVSILPL--- 189 (537)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHhHHHHHHhcccccChHHHHHHHHHHhhcchHHHHHHHHHHHHHhhccc---
Confidence 999999999999999999999999999999998654 444444446777777664 68999999999984221
Q ss_pred ccceeeeccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhcccccccccccccccccCCCccc
Q psy14622 161 QDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRFGPEVR 240 (788)
Q Consensus 161 ~d~~ILite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~~~~~~~r 240 (788)
..|..
T Consensus 190 ------------------------------------------------------------------------~~Fnv--- 194 (537)
T KOG0362|consen 190 ------------------------------------------------------------------------MSFNV--- 194 (537)
T ss_pred ------------------------------------------------------------------------ccccc---
Confidence 00111
Q ss_pred cccccceeecccccccCcccccccccccccccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeeccccCCcce
Q psy14622 241 GLMLQGVDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEAL 320 (788)
Q Consensus 241 ~~~L~~~~i~~~~~~~tp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 320 (788)
+.|.+
T Consensus 195 ----dnIrV----------------------------------------------------------------------- 199 (537)
T KOG0362|consen 195 ----DNIRV----------------------------------------------------------------------- 199 (537)
T ss_pred ----cceEE-----------------------------------------------------------------------
Confidence 11111
Q ss_pred eeEeeecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccccCCCCCchhhhhhhhhHH
Q psy14622 321 STLVVGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFIIELKLVLE 400 (788)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (788)
++.
T Consensus 200 -----------------------------------------cKi------------------------------------ 202 (537)
T KOG0362|consen 200 -----------------------------------------CKI------------------------------------ 202 (537)
T ss_pred -----------------------------------------EEE------------------------------------
Confidence 000
Q ss_pred HHHHHHHHhhhccCCCCcEEEecCCccceeEEEEEeeEecccc---------------cccccccccCCceeE-ecccee
Q psy14622 401 YYIQTYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGY---------------ISPYFINTAKGAKVE-FQDALV 464 (788)
Q Consensus 401 ~~~~~~~~~~~kvG~dGvItveeg~~~~~~lev~eG~~fd~Gy---------------lSpyfvt~~e~~~v~-l~~p~I 464 (788)
. |.++++ ..++.||-|.+.- .-|+=++.++..-.+ +.+|.
T Consensus 203 ------------~----------Gg~l~~-S~Vv~GmVfkr~~eG~v~~ak~arvAvf~cP~d~~~TEtkgTvLi~~A~- 258 (537)
T KOG0362|consen 203 ------------L----------GGGLED-SCVVCGMVFKRDPEGEVKSAKDARVAVFACPFDIAQTETKGTVLLKNAK- 258 (537)
T ss_pred ------------e----------cCCccc-ceeeEEEEeccccCCcccccccceeEEEecCCCcccccCcceeeecCcH-
Confidence 0 111221 2234455554432 223223333322111 23332
Q ss_pred ecccccccchh----hhHH-HHHHHHhcCCCeEEEecCCChhhHHhHHhhhcccccceeeecCCCCcchhhhhhhhhHhh
Q psy14622 465 LLSESKISSIQ----SIIP-ALELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATLQDLAVA 539 (788)
Q Consensus 465 LitD~kI~~i~----~IlP-~Le~~~~~~rpLLIIAedi~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~~~LeDiAil 539 (788)
.+-++. .++. ....+.-.+-..++-...|+..+|.-+ +..++.+++.|+ +.-|..+.-.
T Consensus 259 -----el~~FSKgEe~lle~~vk~Ia~~gvkViV~~g~V~em~Lhfl------nky~ImVlqi~S-----k~eLrrlcrt 322 (537)
T KOG0362|consen 259 -----ELLNFSKGEEALLEEQVKAIADAGVKVIVSGGKVDEMTLHFL------NKYKIMVLQINS-----KFDLRRLCRT 322 (537)
T ss_pred -----hhhhhccccHHHHHHHHHHHHhcCCeEEEecCccchhhhhhh------ccccEEEEEecc-----HhhHHHHHHH
Confidence 122221 1332 233333455566666789999888754 456678888884 7778899999
Q ss_pred hCCeEeccCCCCCcccccCcccccceeEEE---EecCceEEEcCCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHh
Q psy14622 540 TGGIVFGDEASPVKLEDLQATDLGSVGEIV---ITKDDTLILKGKGKKEDIDRRADQIRDQIEATTSDYEREKLQERLAR 616 (788)
Q Consensus 540 TGg~vis~~~~g~~l~~v~~~~LG~a~~V~---vt~d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~~~~~~L~eRla~ 616 (788)
.|++..+. +.......||.|++|. +..+..+++.....
T Consensus 323 vGA~~l~r------l~~P~~~~lG~~d~V~~~EiG~~~v~vF~~e~~--------------------------------- 363 (537)
T KOG0362|consen 323 VGATALPR------LFPPAPEELGYCDSVSTQEIGDTLVVVFRWEST--------------------------------- 363 (537)
T ss_pred cCCccchh------ccCCCCccccccceeeeeecCCceEEEEeeccC---------------------------------
Confidence 99988764 3445568899999995 45556555543211
Q ss_pred hcCCeEEEEecCCchhhHHHHHHHHHHHHHHHHHHHHhc-cccCCchhHhhHHHHhhhhhccCccccCCChhhHHHHHHH
Q psy14622 617 LASGVAVLKVGGSSEVEVNEKKDRVTDALNATRAAVEEG-IVPGGGTALLRCIAVLDKLETANADQATGKKEDIDRRADQ 695 (788)
Q Consensus 617 LsggvAvI~VGG~Te~EikErk~r~edAl~a~raA~e~G-iVpGGG~all~as~~L~~~~~~~~~~~~G~~~~i~~r~~~ 695 (788)
.+.+++|-+.|+|..-+++-...++|++|+.++-++.| ++||.|++.++.++.|.+.... ...+++-+
T Consensus 364 -~~~~~TvVLRgst~s~LDd~ERAVddgV~tyK~l~~d~rLlpGagatEieLak~i~~~g~~---~~Gl~q~A------- 432 (537)
T KOG0362|consen 364 -GTRVATVVLRGATQSILDDAERAVDDGVNTYKALCSDSRLLPGAGATEIELAKQISSRGAT---LPGLKQLA------- 432 (537)
T ss_pred -CCceeEEEEcccchhhHHHHHHHHHHhHHHhhhhccCCccccCCchhHHHHHHHHHHhccc---CCCcchhH-------
Confidence 24578999999999999999999999999999999885 9999999999988877543211 01111100
Q ss_pred HHHHHHhhcChhHHHHHHHHHHHhccCeEEEEecccHHHHHHHHhcchHHHHHHHhCCchHHHHHHHhc--C-CCCeeEE
Q psy14622 696 IRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVLE--S-SGEMGYD 772 (788)
Q Consensus 696 l~~~~~~~~~~~d~~~l~eRla~Lsggvavi~vGa~~~e~~e~~~r~~~a~~a~~Aa~e~g~Vv~~~~~--~-~~~~Gyd 772 (788)
+....+++.+-.+..|.||++..--|+.++-. . ....|.|
T Consensus 433 -------------------------------------ik~fa~Ale~~PktlaEnagl~~~evia~ly~~h~~g~~~g~d 475 (537)
T KOG0362|consen 433 -------------------------------------IKKFAEALEVLPKTLAENAGLAVTEVIAKLYAVHQGGKNLGMD 475 (537)
T ss_pred -------------------------------------HHHHHHHhccccHhHHHhcCCcHHHHHHHHHHhhcCCCcceee
Confidence 66677889998999999999999999988753 2 3455777
Q ss_pred cCCC-cccchhhcCC
Q psy14622 773 AMNN-EYVNMIQKVL 786 (788)
Q Consensus 773 a~~~-~~~dm~~~Gi 786 (788)
..-. ..-|+.++||
T Consensus 476 i~~e~~~~d~~~~~i 490 (537)
T KOG0362|consen 476 IEAEGGTIDVREEGI 490 (537)
T ss_pred eeccccccChhhhch
Confidence 6544 4667777665
No 42
>KOG0364|consensus
Probab=99.93 E-value=5.1e-25 Score=239.09 Aligned_cols=418 Identities=22% Similarity=0.296 Sum_probs=301.9
Q ss_pred eeccCCCCCcCCCCceeeeecCCCCceEeeChHHhhccccccccccChhhHHHHHHhhhcccccCCCchhHHHHHHHHHH
Q psy14622 7 EQSWGSPKITKDDGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIAK 86 (788)
Q Consensus 7 ~~~~~S~kiLGPkG~nkmI~~~~G~~~ITnDGvTIlk~I~l~d~~ehpgAkLl~e~A~~qd~evGDGTTTavVLA~aLL~ 86 (788)
++-.+++ |||+.|-||+.++.|.+..||||..|+++|+++ ||+|+-+.++|.+||+++||||||+++||+++|+
T Consensus 32 advirtc--lgp~am~kmlld~~g~i~~tndg~ailrei~Va----hpaaksmiel~rtqdeevgdgttsvi~lagE~L~ 105 (527)
T KOG0364|consen 32 ADVIRTC--LGPRAMLKMLLDPMGGIVLTNDGNAILREIDVA----HPAAKSMIELSRTQDEEVGDGTTSVIILAGEMLN 105 (527)
T ss_pred HHHHHHh--cChHHHHHHhhccCCceEEecCcHHHHHHHhhc----CcchhhHhhhhhcccccccCCceeeeeehHHHhh
Confidence 3456788 999999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhcCCCCC--CHHHHHHHHHhccCCc------hHHhhHHHHHHHHhhhcc
Q psy14622 87 EGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVT--TPEEIAQVATISANGD------KAVGELISDAMKRVSAKV 158 (788)
Q Consensus 87 eglklI~~Gi~P~~I~~Gi~~A~~~ile~L~~ls~~V~--d~eeL~~VA~tSan~d------~~Ig~LIadAv~kV~~~~ 158 (788)
++..++++++||+.+++.|.+|++.++..+++++.|++ +...+.++..+|..++ ..++++.-+|+.+|+.+
T Consensus 106 ~~~~~l~~~~Hp~~i~ka~~~aled~~~~~~~~~~~~d~~~~~km~~vi~~~v~tk~~~~~~~~~~~lal~avk~V~~~- 184 (527)
T KOG0364|consen 106 VAEPFLEEGIHPTVIIKAYIKALEDNIRALDKISIPVDVKDQAKMLRVINSSVGTKFNSRWSDLICNLALDAVKTVGVE- 184 (527)
T ss_pred hcchhhhcCcchHHHHHHHHHHHHHHHHHHHhhcccCCcccHHHHHhhhhhhhhhhhhhhhcchhhhHHHHHHHHhhhc-
Confidence 99999999999999999999999999999999888865 7788999999888765 24566666676664210
Q ss_pred ccccceeeeccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhcccccccccccccccccCCCc
Q psy14622 159 EFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRFGPE 238 (788)
Q Consensus 159 e~~d~~ILite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~~~~~~ 238 (788)
-|.
T Consensus 185 ----------------------------------------------------------------------------~g~- 187 (527)
T KOG0364|consen 185 ----------------------------------------------------------------------------NGR- 187 (527)
T ss_pred ----------------------------------------------------------------------------cCc-
Confidence 000
Q ss_pred cccccccceeecccccccCcccccccccccccccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeeccccCCc
Q psy14622 239 VRGLMLQGVDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGE 318 (788)
Q Consensus 239 ~r~~~L~~~~i~~~~~~~tp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 318 (788)
.|++
T Consensus 188 -------e~di--------------------------------------------------------------------- 191 (527)
T KOG0364|consen 188 -------EIDI--------------------------------------------------------------------- 191 (527)
T ss_pred -------eech---------------------------------------------------------------------
Confidence 1111
Q ss_pred ceeeEeeecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccccCCCCCchhhhhhhhh
Q psy14622 319 ALSTLVVGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFIIELKLV 398 (788)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (788)
++ |
T Consensus 192 ------------------------k~----y------------------------------------------------- 194 (527)
T KOG0364|consen 192 ------------------------KR----Y------------------------------------------------- 194 (527)
T ss_pred ------------------------hh----h-------------------------------------------------
Confidence 00 0
Q ss_pred HHHHHHHHHHhhhccCCCCcEEEecCCccceeEEEEEeeEecccccccccccccCCceeEeccceeecccccccc-----
Q psy14622 399 LEYYIQTYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESKISS----- 473 (788)
Q Consensus 399 ~~~~~~~~~~~~~kvG~dGvItveeg~~~~~~lev~eG~~fd~GylSpyfvt~~e~~~v~l~~p~ILitD~kI~~----- 473 (788)
+- +||| .|--+. +-++++|..+++-...| +|+=..+||.|++.|..+.-
T Consensus 195 --------~k-veKv---------pgg~l~-~s~vl~Gv~~nkdv~Hp-------kmrr~IenprivLlD~~LeykkGeS 248 (527)
T KOG0364|consen 195 --------AK-VEKV---------PGGLLE-DSCVLKGVMINKDVTHP-------KMRRAIENPRIVLLDCPLEYKKGES 248 (527)
T ss_pred --------cc-cccc---------Cccccc-ccceecceeeccccCcH-------HHHHHhhcCcEEEecCCccCCCCcc
Confidence 00 0111 011111 12455666666555444 33344566666666655531
Q ss_pred -----------hhhhHHHHH-------HHHhcCCCeEEEec-CCChhhHHhHHhhhcccccceeeecCCCCcchhhhhhh
Q psy14622 474 -----------IQSIIPALE-------LANSKRKPLVILAE-DVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATLQ 534 (788)
Q Consensus 474 -----------i~~IlP~Le-------~~~~~~rpLLIIAe-di~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~~~Le 534 (788)
+..++.+=| ...-.=+|=|||+| +++.-|...|..++.-+.++. |+.--.
T Consensus 249 qtnve~~~eed~~r~Lqieee~v~~mc~~Ii~v~pDlVitekG~sdla~hyl~k~~iT~~rr~-----------rKtDn~ 317 (527)
T KOG0364|consen 249 QTNVEIVKEEDFTRILQIEEEQVQAMCEVIIAVKPDLVITEKGVSDLAQHYLLKANITAIRRL-----------RKTDNN 317 (527)
T ss_pred ccceeeeechhHHHHHHhhHHHHHHHHHHHHeecccEEEeccchhHHHHHHHHhcCchhhhhh-----------hccccc
Confidence 111222222 11112478888875 999999999998887776665 777788
Q ss_pred hhHhhhCCeEeccCCCCCcccccCcccccc-eeEE---EEecCceEEEcCCCCHHHHHHHHHHHHHHHHhcCChHHHHHH
Q psy14622 535 DLAVATGGIVFGDEASPVKLEDLQATDLGS-VGEI---VITKDDTLILKGKGKKEDIDRRADQIRDQIEATTSDYEREKL 610 (788)
Q Consensus 535 DiAilTGg~vis~~~~g~~l~~v~~~~LG~-a~~V---~vt~d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~~~~~~L 610 (788)
.||..||++.++. ++++...+.|+ |.-. .+.++.++++..+.+|.+
T Consensus 318 ria~acga~iv~r------pedl~e~dvGt~agLf~~kK~gdeyf~f~~~Ck~pka------------------------ 367 (527)
T KOG0364|consen 318 RIARACGARIVNR------PEDLPERDVGTGAGLFEVKKIGDEYFTFFTDCKEPKA------------------------ 367 (527)
T ss_pred hhhhhcCceeccC------hhhCchhccCcccceeeeeccCchhhhhhhhcCCCcc------------------------
Confidence 9999999998874 47777777774 3233 356678888988888876
Q ss_pred HHHHHhhcCCeEEEEecCCchhhHHHHHHHHHHHHHHHHHHHHh-ccccCCchhHhhHHHHhhhhhccCccccCCChhhH
Q psy14622 611 QERLARLASGVAVLKVGGSSEVEVNEKKDRVTDALNATRAAVEE-GIVPGGGTALLRCIAVLDKLETANADQATGKKEDI 689 (788)
Q Consensus 611 ~eRla~LsggvAvI~VGG~Te~EikErk~r~edAl~a~raA~e~-GiVpGGG~all~as~~L~~~~~~~~~~~~G~~~~i 689 (788)
.+|...|+|-.-++|--.-+-||..-+|+.+-+ -+|||||++....++.|.+-... ..|
T Consensus 368 -----------Ctillrg~skdil~e~ernlqda~~varn~ii~PklvPGGGAtEMAvs~~L~qksa~----~~G----- 427 (527)
T KOG0364|consen 368 -----------CTILLRGPSKDILNEVERNLQDAMGVARNVIINPKLVPGGGATEMAVSHELRQKSAL----MTG----- 427 (527)
T ss_pred -----------eEEEeccCchhHHHHHHHHhhhHHHHHHHhccCCcccCCccHHHHHHHHHHHHHHhh----ccc-----
Confidence 789999999999999999999999999999886 79999999999998888652211 111
Q ss_pred HHHHHHHHHHHHhhcChhHHHHHHHHHHHhccCeEEEEecccHHHHHHHHhcchHHHHHHHhCCchHHHHHHHhc--C--
Q psy14622 690 DRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVLE--S-- 765 (788)
Q Consensus 690 ~~r~~~l~~~~~~~~~~~d~~~l~eRla~Lsggvavi~vGa~~~e~~e~~~r~~~a~~a~~Aa~e~g~Vv~~~~~--~-- 765 (788)
...-+| .-...++.+..+..+.|+++..=-++..+.+ .
T Consensus 428 ------------VekwPY--------------------------~Ava~AlEviPrtliqncGan~Ir~lTalr~kh~~G 469 (527)
T KOG0364|consen 428 ------------VEKWPY--------------------------GAVAGALEVIPRTLIQNCGANPIRALTALRAKHKEG 469 (527)
T ss_pred ------------hhccch--------------------------hhhhcCceeccHHHHhhcCccHHHHHHHHHHHhcCc
Confidence 000111 2223455666678888888854333333332 1
Q ss_pred CCCeeEEcCCCcccchhhcCC
Q psy14622 766 SGEMGYDAMNNEYVNMIQKVL 786 (788)
Q Consensus 766 ~~~~Gyda~~~~~~dm~~~Gi 786 (788)
...||.|-+|+..+||.+.|+
T Consensus 470 ~~~~gi~g~tg~iVDm~~~~i 490 (527)
T KOG0364|consen 470 QRVWGIDGETGVIVDMVELGI 490 (527)
T ss_pred ceeecccCceeeEeeeeeccc
Confidence 235799999999999998875
No 43
>PLN03167 Chaperonin-60 beta subunit; Provisional
Probab=99.93 E-value=1.7e-27 Score=276.59 Aligned_cols=391 Identities=22% Similarity=0.267 Sum_probs=260.8
Q ss_pred cccccccccccCCC--ccccccccceeecccccccC--c---cccccccc-ccc-cccceeecchhhhhhhhhhhhhhhh
Q psy14622 224 LLRRAYAKDVRFGP--EVRGLMLQGVDILADAMYRL--P---RVLRSQNL-TPL-LRAKVEFQDALVLLSESKISSIQSI 294 (788)
Q Consensus 224 ~~~~~~~k~~~~~~--~~r~~~L~~~~i~~~~~~~t--p---~v~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (788)
..+...+|++.||+ ++|+.++.++..+++++.+| | +|++..+| .|. ||||++++|++.+.. +..|+++.|
T Consensus 50 ~~~~~~~k~~~~~~~~~ar~~l~~g~~~la~~vktTLGP~G~~kmi~~~~G~~~ITnDG~TIlk~i~~~h-P~~~~gakl 128 (600)
T PLN03167 50 SPKVKAAKELHFNKDGSAIKKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEVELED-PVENIGAKL 128 (600)
T ss_pred CchhhhcceeecCCcHHHHHHHHHHHHHHHHHHhccCCCCCCCEEEECCCCCeeEeccHHHHHHHcccCC-chhhHHHHH
Confidence 34456789999999 69999999999999999999 9 99999999 888 999999999998765 777888888
Q ss_pred hhHHHhhhccCCcceeeccc--cCCcceeeEe---eecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCc
Q psy14622 295 IPALELANSKRKPLVILAED--VDGEALSTLV---VGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKT 369 (788)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~--~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (788)
+ ++++.+-++ ||||||+++| +.++|.+.+++|.+|+.+.+|+++|.+.+++
T Consensus 129 l----------~~~a~~qd~evGDGTTTvvVLa~~LL~ea~~li~~Gi~P~~I~~G~~~A~~~~~~-------------- 184 (600)
T PLN03167 129 V----------RQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVQITRGIEKTAKALVK-------------- 184 (600)
T ss_pred H----------HHHHHhhhhhhCCCccHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHH--------------
Confidence 4 555555555 9999999999 8999999999999999999999999999999
Q ss_pred chhhhhhhhhccccCCCCCchhhhhhhhhHHHHHHHHHHhhhccCCCCcEEEecCCccceeEEEEEe------eEecccc
Q psy14622 370 LTDELEVIEGMKFDRGYISPYFIIELKLVLEYYIQTYIYLCLKVGKEGVITVKDGKTLTDELEVIEG------MKFDRGY 443 (788)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kvG~dGvItveeg~~~~~~lev~eG------~~fd~Gy 443 (788)
+|++++.++.+ ..+.++|++++|++. .+++.++++ +-.=| ++| .+.+.+| ++|-.|+
T Consensus 185 ---~L~~~s~~v~d-~~L~~vA~tS~~~~~-~i~~liaeA---v~~Vg----~~g-----~i~v~~g~s~~dsl~~v~G~ 247 (600)
T PLN03167 185 ---ELKKMSKEVED-SELADVAAVSAGNNY-EVGNMIAEA---MSKVG----RKG-----VVTLEEGKSAENNLYVVEGM 247 (600)
T ss_pred ---HHHHhcccCCH-HHHHHHHHHhccCcH-HHHHHHHHH---HHHhc----cCC-----cEEeccCCCccceeEEEEEE
Confidence 99999999976 569999999999876 457777762 32111 122 2344444 2333333
Q ss_pred cccccccccCCceeEeccceeecccccccchhhhHHHHHHHHhcCCCeEEEecCCChhhHHhHHhhhcccccceeeecCC
Q psy14622 444 ISPYFINTAKGAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAP 523 (788)
Q Consensus 444 lSpyfvt~~e~~~v~l~~p~ILitD~kI~~i~~IlP~Le~~~~~~rpLLIIAedi~~eAL~~Lv~N~~rg~~~v~AVkaP 523 (788)
. .+. .|..||. ++|.+ . ...+...|.+++.+.. ++.+
T Consensus 248 ~-----~d~-----g~~spyf-vt~~~-----~------m~~~l~np~Ill~d~~---------------------i~~~ 284 (600)
T PLN03167 248 Q-----FDR-----GYISPYF-VTDSE-----K------MSVEYDNCKLLLVDKK---------------------ITNA 284 (600)
T ss_pred E-----ecC-----CccCccc-ccCcC-----C------CeEEEeCCEEEEEccc---------------------cCCH
Confidence 2 111 2455766 44432 0 1112345777776431 1111
Q ss_pred CCcchhhhhhhhhHhhhCCeE--eccCCCCCcccccCcccccceeEEEEecCceEEEcC--CCCHHHHHHHHHHHHHHHH
Q psy14622 524 GFGDNRKATLQDLAVATGGIV--FGDEASPVKLEDLQATDLGSVGEIVITKDDTLILKG--KGKKEDIDRRADQIRDQIE 599 (788)
Q Consensus 524 ~fG~~R~~~LeDiAilTGg~v--is~~~~g~~l~~v~~~~LG~a~~V~vt~d~Ttii~g--~g~~~~I~~R~~~l~~~~~ 599 (788)
+....+|+.+ +.+|..+ +.+++.+..+..+-.+.|-...+ .+.++- .|+
T Consensus 285 ---~~l~~~le~i-~~~g~~lvI~a~~I~~~aL~~L~~nkl~g~~~-------i~aVk~p~~g~---------------- 337 (600)
T PLN03167 285 ---RDLIGILEDA-IRGGYPLLIIAEDIEQEALATLVVNKLRGSLK-------IAALKAPGFGE---------------- 337 (600)
T ss_pred ---HHHHHHHHHH-HHhCcCEEEEcCCCCHHHHHHHHHhhccccce-------EEEEEcccCCc----------------
Confidence 0111223322 2234332 23222222222221122111111 122322 122
Q ss_pred hcCChHHHHHHHHHHHhhcCCeEEEEecCCchhhHHHHHHHHHHHHHHHHHHHHhccccCCchhHhhHHHHhhhhhcc-C
Q psy14622 600 ATTSDYEREKLQERLARLASGVAVLKVGGSSEVEVNEKKDRVTDALNATRAAVEEGIVPGGGTALLRCIAVLDKLETA-N 678 (788)
Q Consensus 600 ~~~s~~~~~~L~eRla~LsggvAvI~VGG~Te~EikErk~r~edAl~a~raA~e~GiVpGGG~all~as~~L~~~~~~-~ 678 (788)
.+...=+||+.++|+.++-.--|.+-.++..- +. |. |.. +..-+.. .
T Consensus 338 ------~~~~~L~dia~~tGa~~i~~~~~~~l~~~~~~-~L--------------------G~----a~~-v~~~~~~t~ 385 (600)
T PLN03167 338 ------RKSQYLDDIAILTGGTVIREEVGLSLDKVGKE-VL--------------------GT----AAK-VVLTKDTTT 385 (600)
T ss_pred ------chHHHHHHHHHhhCCEEecccccCCcccCCHH-HC--------------------ce----eeE-EEEecccce
Confidence 12334467999999887763212111111100 00 11 111 1000000 0
Q ss_pred ccccCCChhhHHHHHHHHHHHHHhhcChhHHHHHHHHHHHhccCeEEEEecccH-HHHHHHHhcchHHHHHHHhCCchHH
Q psy14622 679 ADQATGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSS-VEIVKKALRQPCMTIATNAGVDASV 757 (788)
Q Consensus 679 ~~~~~G~~~~i~~r~~~l~~~~~~~~~~~d~~~l~eRla~Lsggvavi~vGa~~-~e~~e~~~r~~~a~~a~~Aa~e~g~ 757 (788)
--.+.|+++.|++|+.+++.+++.++++|++++|++||++|+|++++|++||+| .++.|++.+++||++|+++|+++|+
T Consensus 386 iig~~~~~~~i~~r~~~i~~~~~~~~~~~~~~~l~~Ri~~l~g~~aiI~vgG~t~~~l~E~er~i~DAl~avk~ai~~gv 465 (600)
T PLN03167 386 IVGDGSTQEAVNKRVAQIKNLIEAAEQDYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGI 465 (600)
T ss_pred eeCCCccHHHHHHHHHHHHhhhhccCCHHHHHHHHHHHhhcCCcEEEEEecCCcHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 023468899999999999999999999999999999999999999999999998 9999999999999999999999885
Q ss_pred H
Q psy14622 758 V 758 (788)
Q Consensus 758 V 758 (788)
|
T Consensus 466 V 466 (600)
T PLN03167 466 V 466 (600)
T ss_pred C
Confidence 4
No 44
>PRK14104 chaperonin GroEL; Provisional
Probab=99.91 E-value=1e-25 Score=259.71 Aligned_cols=387 Identities=28% Similarity=0.350 Sum_probs=256.3
Q ss_pred cccccCCCccccccccceeecccccccC--c---cccccccc-ccc-cccceeecchhhhhhhhhhhhhhhhhhHHHhhh
Q psy14622 230 AKDVRFGPEVRGLMLQGVDILADAMYRL--P---RVLRSQNL-TPL-LRAKVEFQDALVLLSESKISSIQSIIPALELAN 302 (788)
Q Consensus 230 ~k~~~~~~~~r~~~L~~~~i~~~~~~~t--p---~v~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (788)
+|++.||.++|..++.++..+++++..| | ++++.+++ .|. ||||+++++++.+.+ ++.+.++.++
T Consensus 3 ~~~~~~~~~a~~~~~~~~~~la~~v~tTLGP~G~~k~i~~~~g~~~iTnDG~tIlk~i~~~d-~~~~pgakll------- 74 (546)
T PRK14104 3 AKEVKFGVDARDRMLRGVDILANAVKVTLGPKGRNVVLDKSFGAPRITKDGVTVAKEIELED-KFENMGAQMV------- 74 (546)
T ss_pred cceecchHHHHHHHHHHHHHHHHHHhhccCCCCCceEEEcCCCCeeEeccHHHHHHHhcCCC-cccChHHHHH-------
Confidence 4789999999999999999999999999 9 89999999 888 999999999998866 7778888884
Q ss_pred ccCCcceeeccc--cCCcceeeEe---eecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhh
Q psy14622 303 SKRKPLVILAED--VDGEALSTLV---VGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVI 377 (788)
Q Consensus 303 ~~~~~~~~~~~~--~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (788)
++++.+.++ ||||||+++| +-++|.+-++.|.+|+.+.+|+++|.+.+++ .|+++
T Consensus 75 ---~e~a~~qd~e~GDGTTTvvvLa~~LL~~a~~li~~Gi~P~~I~~G~~~A~~~~~~-----------------~L~~~ 134 (546)
T PRK14104 75 ---REVASKSADAAGDGTTTATVLAQAIVREGAKSVAAGMNPMDLKRGIDLAVEAVVA-----------------DLVKN 134 (546)
T ss_pred ---HHHHHhhcccccCcccHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHH-----------------HHHHh
Confidence 555555555 9999999999 8999999999999999999999999999888 99999
Q ss_pred hhccccCCCCCchhhhhhhhhHHHHHHHHHHhhhccCCCCcEEEecCCccceeEEEEEe------eEecccccccccccc
Q psy14622 378 EGMKFDRGYISPYFIIELKLVLEYYIQTYIYLCLKVGKEGVITVKDGKTLTDELEVIEG------MKFDRGYISPYFINT 451 (788)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kvG~dGvItveeg~~~~~~lev~eG------~~fd~GylSpyfvt~ 451 (788)
+.|+.+.+++.+++.+++++|.. +++.+++ .+-.=| .+| .+++.++ ++|-.|+.= +
T Consensus 135 a~~v~~~~~l~~va~~s~~~d~~-i~~lv~~---Av~~vg----~~g-----~i~v~~~~~~~~~~~~~~G~~~-----~ 196 (546)
T PRK14104 135 SKKVTSNDEIAQVGTISANGDAE-IGKFLAD---AMKKVG----NEG-----VITVEEAKSLETELDVVEGMQF-----D 196 (546)
T ss_pred cccCCCHHHHHHHHHHHhcCchH-HHHHHHH---HHHHhc----cCC-----ceeeEecccccceEEEEEEEEE-----e
Confidence 99998878899999999998855 4666665 232111 122 3334333 222233320 0
Q ss_pred cCCceeEeccceeecccccccchhhhHHHHHHHHhcCCCeEEEecCCChhhHHhHHhhhcccccceeeecCCCCcchhhh
Q psy14622 452 AKGAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKA 531 (788)
Q Consensus 452 ~e~~~v~l~~p~ILitD~kI~~i~~IlP~Le~~~~~~rpLLIIAedi~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~~ 531 (788)
. .|.+||.+. |.+ .. -.+...|.+++.+.- ++.+ +.+ ..
T Consensus 197 ~-----g~~~p~~~~-~~~------~~-----~~~~~~~~Ilv~d~~----i~~~--~~i------------------~~ 235 (546)
T PRK14104 197 R-----GYISPYFVT-NAD------KM-----RVEMDDAYILINEKK----LSSL--NEL------------------LP 235 (546)
T ss_pred C-----CCCCcchhc-Ccc------cC-----ceeeeCcEEEEehhh----hcCH--HHH------------------HH
Confidence 0 122343332 221 00 112345888886511 1111 100 11
Q ss_pred hhhhhHhhhCCeE-e-ccCCCCCcccccCcccccceeEEEEecCceEEEcC--CCCHHHHHHHHHHHHHHHHhcCChHHH
Q psy14622 532 TLQDLAVATGGIV-F-GDEASPVKLEDLQATDLGSVGEIVITKDDTLILKG--KGKKEDIDRRADQIRDQIEATTSDYER 607 (788)
Q Consensus 532 ~LeDiAilTGg~v-i-s~~~~g~~l~~v~~~~LG~a~~V~vt~d~Ttii~g--~g~~~~I~~R~~~l~~~~~~~~s~~~~ 607 (788)
+|+.++ -+|..+ | ..++.+..+.-+..+.+-....|.+ +.- .|+ .|
T Consensus 236 ~l~~i~-~~g~~lvI~~~~i~~~al~~l~~Nk~~~~~~i~a-------v~~~~~g~----------------------~r 285 (546)
T PRK14104 236 LLEAVV-QTGKPLVIVAEDVEGEALATLVVNRLRGGLKVAA-------VKAPGFGD----------------------RR 285 (546)
T ss_pred HHHHHH-HhCcCEEEECCCCcHHHHHHHHhCcccceeeEEE-------EeccCCCc----------------------ch
Confidence 233322 334332 2 2221111211111111111111211 221 111 12
Q ss_pred HHHHHHHHhhcCCeEEEEecCCchhhHHHHHHHHHHHHHHHHHHHHhccccCCchhHhhHHHHhhhhhccCccccCCChh
Q psy14622 608 EKLQERLARLASGVAVLKVGGSSEVEVNEKKDRVTDALNATRAAVEEGIVPGGGTALLRCIAVLDKLETANADQATGKKE 687 (788)
Q Consensus 608 ~~L~eRla~LsggvAvI~VGG~Te~EikErk~r~edAl~a~raA~e~GiVpGGG~all~as~~L~~~~~~~~~~~~G~~~ 687 (788)
...-+||++++|+.++-+-.|.+-.++..- + =|. +..+. ...-.+ ..-.+.++++
T Consensus 286 ~~~l~~ia~~tG~~~i~~~~~~~l~~~~~~-~--------------LG~-----a~~v~----~~~~~~-~~i~g~~~~~ 340 (546)
T PRK14104 286 KAMLQDIAILTGGQAISEDLGIKLENVTLQ-M--------------LGR-----AKKVM----IDKENT-TIVNGAGKKA 340 (546)
T ss_pred HHHHHHHHHHhCCEEEecCCCCCcCcCCHH-H--------------CCc-----eeEEE----EcCCEE-EEEeCCCCHH
Confidence 344578999999998877333221111110 0 011 00000 000000 1123678999
Q ss_pred hHHHHHHHHHHHHHhhcChhHHHHHHHHHHHhccCeEEEEecccH-HHHHHHHhcchHHHHHHHhCCchHHH
Q psy14622 688 DIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSS-VEIVKKALRQPCMTIATNAGVDASVV 758 (788)
Q Consensus 688 ~i~~r~~~l~~~~~~~~~~~d~~~l~eRla~Lsggvavi~vGa~~-~e~~e~~~r~~~a~~a~~Aa~e~g~V 758 (788)
.|..|+++|+.++++++++|++++|+||+++|+|++|+|.+||+| .++.|++.++.|+++|.++++++|+|
T Consensus 341 ~i~~ri~~l~~~~~~~~~~~~~~~l~eRi~~l~~~~atI~irG~t~~~l~e~~r~i~Dal~a~~~ai~~g~V 412 (546)
T PRK14104 341 DIEARVAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDAMHATRAAVEEGIV 412 (546)
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcCcC
Confidence 999999999999999999999999999999999999999999998 99999999999999999999998855
No 45
>PRK12852 groEL chaperonin GroEL; Reviewed
Probab=99.89 E-value=2.6e-24 Score=248.16 Aligned_cols=390 Identities=27% Similarity=0.300 Sum_probs=252.7
Q ss_pred cccccCCCccccccccceeecccccccC--c---cccccccc-ccc-cccceeecchhhhhhhhhhhhhhhhhhHHHhhh
Q psy14622 230 AKDVRFGPEVRGLMLQGVDILADAMYRL--P---RVLRSQNL-TPL-LRAKVEFQDALVLLSESKISSIQSIIPALELAN 302 (788)
Q Consensus 230 ~k~~~~~~~~r~~~L~~~~i~~~~~~~t--p---~v~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (788)
+|++.||.++|..++.++..+++++..| | ++++..++ .|. ||||+++++++.+.+ ++.+.++.++
T Consensus 3 ~~~~~~~~~a~~~~~~~~~~la~~v~tTLGP~G~~kmi~~~~g~~~iTnDG~TIlk~i~~~~-~~~~p~akll------- 74 (545)
T PRK12852 3 AKDVKFSGDARDRMLRGVDILANAVKVTLGPKGRNVVIEKSFGAPRITKDGVTVAKEIELED-KFENMGAQMV------- 74 (545)
T ss_pred cchhhccHHHHHHHHHHHHHHHHHHhcccCCCCCCEEEECCCCCeeEeccHHHHHHHccCCC-cccChHHHHH-------
Confidence 5889999999999999999999999999 9 89999999 887 999999999998876 5667777774
Q ss_pred ccCCcceeeccc--cCCcceeeEe---eecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhh
Q psy14622 303 SKRKPLVILAED--VDGEALSTLV---VGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVI 377 (788)
Q Consensus 303 ~~~~~~~~~~~~--~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (788)
.+++.+-++ ||||||+++| +-+++.+-++.|.+|+.+.+|+++|.+.+++ .|+++
T Consensus 75 ---~e~a~~q~~e~GDGTTtvvvLa~eLL~~a~~li~~Gi~P~~I~~G~~~A~~~~l~-----------------~L~~~ 134 (545)
T PRK12852 75 ---REVASKTNDLAGDGTTTATVLAQAIVREGAKAVAAGMNPMDLKRGIDIAVAAVVK-----------------DIEKR 134 (545)
T ss_pred ---HHHHhhcCceecCCcchHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHH-----------------HHHHh
Confidence 333333334 9999999999 8899999999999999999999999999998 99999
Q ss_pred hhccccCCCCCchhhhhhhhhHHHHHHHHHHhhhccCCCCcEEEecCCccceeEEEEEee------Eecccccccccccc
Q psy14622 378 EGMKFDRGYISPYFIIELKLVLEYYIQTYIYLCLKVGKEGVITVKDGKTLTDELEVIEGM------KFDRGYISPYFINT 451 (788)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kvG~dGvItveeg~~~~~~lev~eG~------~fd~GylSpyfvt~ 451 (788)
+.++.+.+++.+++.++.+++ +.+++.+++ .+-.=| .+| .+++.+|- .|-.|+. -+
T Consensus 135 s~~v~~~~~l~~va~~s~~~~-~~l~~li~e---A~~~vg----~~g-----~i~v~~g~~~~~~~~~v~G~~-----~~ 196 (545)
T PRK12852 135 AKPVASSAEIAQVGTISANGD-AAIGKMIAQ---AMQKVG----NEG-----VITVEENKSLETEVDIVEGMK-----FD 196 (545)
T ss_pred cccCCCHHHHHHHHhhhcCCh-HHHHHHHHH---HHHHhc----cCC-----ceeeecCCCcceEEEEEEeEE-----ec
Confidence 999988778999999999886 445666555 232211 122 23332221 1222222 01
Q ss_pred cCCceeEeccceeecccccccchhhhHHHHHHHHhcCCCeEEEecCCChhhHHhHHhhhcccccceeeecCCCCcchhhh
Q psy14622 452 AKGAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKA 531 (788)
Q Consensus 452 ~e~~~v~l~~p~ILitD~kI~~i~~IlP~Le~~~~~~rpLLIIAedi~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~~ 531 (788)
. .|.+||.+. |.+ . .| ..-..|.+++.+.--.++- .=..
T Consensus 197 ~-----g~~~p~~v~-~~~-----~-~~-----~~l~n~~Ili~d~~i~~~~------------------------~i~~ 235 (545)
T PRK12852 197 R-----GYLSPYFVT-NAE-----K-MT-----VELDDAYILLHEKKLSGLQ------------------------AMLP 235 (545)
T ss_pred C-----CccCCcccc-ccc-----c-ce-----EEecCceEEEecCccCCHH------------------------HHHH
Confidence 1 133454433 322 1 11 1223577777543111110 0111
Q ss_pred hhhhhHhhhCCe-EeccCCCCCcccccCcccccceeEEEEecCceEEEcCCCCHHHHHHHHHHHHHHHHhcCChHHHHHH
Q psy14622 532 TLQDLAVATGGI-VFGDEASPVKLEDLQATDLGSVGEIVITKDDTLILKGKGKKEDIDRRADQIRDQIEATTSDYEREKL 610 (788)
Q Consensus 532 ~LeDiAilTGg~-vis~~~~g~~l~~v~~~~LG~a~~V~vt~d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~~~~~~L 610 (788)
.|+.++ -+|.. +|... .+++..+.+|=..+ .. ..-+.+.++-.+- ..-|...
T Consensus 236 ~l~~i~-~~g~~lvI~~~----~i~~~al~~l~~nk-~~-~~~~i~av~~~~~--------------------~~~r~~~ 288 (545)
T PRK12852 236 VLEAVV-QSGKPLLIIAE----DVEGEALATLVVNR-LR-GGLKVAAVKAPGF--------------------GDRRKAM 288 (545)
T ss_pred HHHHHH-HhCcCEEEECC----CCcHHHHHHHHHhc-cc-ccceEEEEecCCc--------------------ccchHhH
Confidence 233332 23333 22211 12222222221110 00 0001111221110 0112345
Q ss_pred HHHHHhhcCCeEEEEecCCchhhHHHHHHHHHHHHHHHHHHHHhccccCCchhHhhHHHHhhhhhccCccccCCChhhHH
Q psy14622 611 QERLARLASGVAVLKVGGSSEVEVNEKKDRVTDALNATRAAVEEGIVPGGGTALLRCIAVLDKLETANADQATGKKEDID 690 (788)
Q Consensus 611 ~eRla~LsggvAvI~VGG~Te~EikErk~r~edAl~a~raA~e~GiVpGGG~all~as~~L~~~~~~~~~~~~G~~~~i~ 690 (788)
-+||++++|+.++-+-.|.+-.++..- + =|. +..++. .+..+ ..-.+.|+++.|+
T Consensus 289 l~~ia~~tGa~~i~~~~~~~l~~~~~~-~--------------lG~-----~~~v~~----~~~~~-~~i~~~~~~~~i~ 343 (545)
T PRK12852 289 LEDIAILTGGQLISEDLGIKLENVTLK-M--------------LGR-----AKKVVI----DKENT-TIVNGAGKKADIE 343 (545)
T ss_pred HHHHHHhcCCEEEecCcCCCcCCCCHH-H--------------CCC-----CcEEEE----EccEE-EEEeCCCCHHHHH
Confidence 578999999988875333222111110 0 011 111110 00000 1123568999999
Q ss_pred HHHHHHHHHHHhhcChhHHHHHHHHHHHhccCeEEEEecccH-HHHHHHHhcchHHHHHHHhCCchHHH
Q psy14622 691 RRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSS-VEIVKKALRQPCMTIATNAGVDASVV 758 (788)
Q Consensus 691 ~r~~~l~~~~~~~~~~~d~~~l~eRla~Lsggvavi~vGa~~-~e~~e~~~r~~~a~~a~~Aa~e~g~V 758 (788)
.|+++|+++++++.++|++++|+|||++|+|++++|.+||+| .++.|+..++.||+++.++|+++|+|
T Consensus 344 ~ri~~l~~~~~~~~~~~~~~~l~~R~~~l~~~~~tI~irG~t~~~l~E~er~i~DAl~a~~~a~~~g~V 412 (545)
T PRK12852 344 ARVGQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRVEDALNATRAAVQEGIV 412 (545)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHhCCCeEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 999999999999999999999999999999999999999998 99999999999999999999998865
No 46
>CHL00093 groEL chaperonin GroEL
Probab=99.89 E-value=1.1e-24 Score=250.40 Aligned_cols=379 Identities=23% Similarity=0.313 Sum_probs=248.5
Q ss_pred cccccCCCccccccccceeecccccccC--c---cccccccc-ccc-cccceeecchhhhhhhhhhhhhhhhhhHHHhhh
Q psy14622 230 AKDVRFGPEVRGLMLQGVDILADAMYRL--P---RVLRSQNL-TPL-LRAKVEFQDALVLLSESKISSIQSIIPALELAN 302 (788)
Q Consensus 230 ~k~~~~~~~~r~~~L~~~~i~~~~~~~t--p---~v~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (788)
.|++.|++++|..++.++..+++++..| | ++++..++ .|. ||||++++|++.+.. +..+.++.++
T Consensus 2 ~~~~~~~~~~~~~~~~g~~~la~~v~tTlGP~G~~kmi~~~~g~~~ITnDG~tIlk~i~~~h-p~a~~g~~li------- 73 (529)
T CHL00093 2 SKKILYQDNARRALERGMDILAEAVSVTLGPKGRNVVLEKKYGSPQIVNDGVTIAKEIELED-HIENTGVALI------- 73 (529)
T ss_pred CceeecCHHHHHHHHHHHHHHHHHHhcccCCCCCcEEEECCCCCeeEeccHHHHHHHccCcC-HHHHHHHHHH-------
Confidence 4789999999999999999999999999 9 88899999 888 999999999998876 6777777774
Q ss_pred ccCCcceeeccc--cCCcceeeEe---eecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhh
Q psy14622 303 SKRKPLVILAED--VDGEALSTLV---VGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVI 377 (788)
Q Consensus 303 ~~~~~~~~~~~~--~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (788)
++++++.+| ||||||+++| +-++|.+-++.|.+|+.+.+|+++|.+.+++ .|+++
T Consensus 74 ---~~~a~~~~~e~GDGTTtvvvLa~eLL~~a~~li~~Gi~P~~I~~G~~~A~~~~l~-----------------~L~~~ 133 (529)
T CHL00093 74 ---RQAASKTNDVAGDGTTTATVLAYAIVKQGMKNVAAGANPISLKRGIEKATQYVVS-----------------QIAEY 133 (529)
T ss_pred ---HHHHHhcCceecCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH-----------------HHHHh
Confidence 555555555 9999999999 8899999999999999999999999999999 99999
Q ss_pred hhccccCCCCCchhhhhhhhhHHHHHHHHHHhhhccCCCCcEEE-ecCCccceeEEEEEee------Eeccccccccccc
Q psy14622 378 EGMKFDRGYISPYFIIELKLVLEYYIQTYIYLCLKVGKEGVITV-KDGKTLTDELEVIEGM------KFDRGYISPYFIN 450 (788)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kvG~dGvItv-eeg~~~~~~lev~eG~------~fd~GylSpyfvt 450 (788)
+.++.+++.+.++|.+|++++.. +++.+++ .+- .+ .+| .+++.+|- .|-.|+. -
T Consensus 134 s~~v~d~~~L~~VA~ts~~~~~~-l~~lv~e---Av~-----~vg~~g-----~i~~~~g~~~~~~~~~v~G~~-----~ 194 (529)
T CHL00093 134 ARPVEDIQAITQVASISAGNDEE-VGSMIAD---AIE-----KVGREG-----VISLEEGKSTVTELEITEGMR-----F 194 (529)
T ss_pred CCCCCCHHHHHHHHHHhccChHH-HHHHHHH---HHH-----HhccCC-----ceeecCCCccceeeEEEeeEE-----e
Confidence 99999888999999999996655 3665555 222 22 112 22332111 1112221 0
Q ss_pred ccCCceeEeccceeecccccccchhhhHHHHHHHHhcCCCeEEE-ecCCCh---hhHHhHHhhhcccccceeeecCCCCc
Q psy14622 451 TAKGAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVIL-AEDVDG---EALSTLVVNRLKIGLQVAAVKAPGFG 526 (788)
Q Consensus 451 ~~e~~~v~l~~p~ILitD~kI~~i~~IlP~Le~~~~~~rpLLII-Aedi~~---eAL~~Lv~N~~rg~~~v~AVkaP~fG 526 (788)
+. .|.+||. +++.+ . .-.+...|.+++ ...++. +.+.
T Consensus 195 ~~-----g~~~p~f-v~~~k-----~------~~~~l~n~~Ili~d~~le~~~~~i~~---------------------- 235 (529)
T CHL00093 195 EK-----GFISPYF-VTDTE-----R------MEVVQENPYILLTDKKITLVQQDLLP---------------------- 235 (529)
T ss_pred cC-----ccCcCcc-ccCCc-----c------ceEEecCceehhhcCCCCchHHHHHH----------------------
Confidence 10 2444552 23332 0 000112355544 334442 1111
Q ss_pred chhhhhhhhhHhhhCCe-E-eccCCCCCcccccCcccccceeEEEEecCceEEEcCCCCHHHHHHHHHHHHHHHHhcCCh
Q psy14622 527 DNRKATLQDLAVATGGI-V-FGDEASPVKLEDLQATDLGSVGEIVITKDDTLILKGKGKKEDIDRRADQIRDQIEATTSD 604 (788)
Q Consensus 527 ~~R~~~LeDiAilTGg~-v-is~~~~g~~l~~v~~~~LG~a~~V~vt~d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~ 604 (788)
.|+.++ -+|.. + +.+++.+..+..+ +|=+.+.+ ...+.++-.+..
T Consensus 236 -----~l~~i~-~~~~~lvi~~~~i~~~al~~l---~l~k~~g~----~~i~avr~~~~~-------------------- 282 (529)
T CHL00093 236 -----ILEQVT-KTKRPLLIIAEDVEKEALATL---VLNKLRGI----VNVVAVRAPGFG-------------------- 282 (529)
T ss_pred -----HHHHHH-hcCCCEEEEcCCCChHHHHHH---HHhhhccc----ceEEEEecCCCC--------------------
Confidence 122211 12222 1 2222111111111 01111100 122223321111
Q ss_pred HHHHHHHHHHHhhcCCeEEEE-----ecCCchhhHHHHHHHHHHHHHHHHHHHHhccccCCchhHhhHHHHhhhhhccCc
Q psy14622 605 YEREKLQERLARLASGVAVLK-----VGGSSEVEVNEKKDRVTDALNATRAAVEEGIVPGGGTALLRCIAVLDKLETANA 679 (788)
Q Consensus 605 ~~~~~L~eRla~LsggvAvI~-----VGG~Te~EikErk~r~edAl~a~raA~e~GiVpGGG~all~as~~L~~~~~~~~ 679 (788)
..|+..-+|||+++|+.++-+ ++-.++.+ =|. +..++-. ...-.
T Consensus 283 ~~~k~~l~~ia~~tGa~~i~~~~~~~~~~~~~~~--------------------LG~-----~~~v~~~------~~~~~ 331 (529)
T CHL00093 283 DRRKAMLEDIAILTGGQVITEDAGLSLETIQLDL--------------------LGQ-----ARRIIVT------KDSTT 331 (529)
T ss_pred cchHHHHHHHHHhhCCEEecccccCCcCCCCHHH--------------------CCc-----ceEEEEe------cCEEE
Confidence 013344578999999887763 22222110 011 1111100 00000
Q ss_pred cccCCChhhHHHHHHHHHHHHHhhcChhHHHHHHHHHHHhccCeEEEEecccH-HHHHHHHhcchHHHHHHHhCCchHHH
Q psy14622 680 DQATGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSS-VEIVKKALRQPCMTIATNAGVDASVV 758 (788)
Q Consensus 680 ~~~~G~~~~i~~r~~~l~~~~~~~~~~~d~~~l~eRla~Lsggvavi~vGa~~-~e~~e~~~r~~~a~~a~~Aa~e~g~V 758 (788)
--..|++..|..|+++++.+++.++++|++++|+||+++|+|++++|.+||+| .++.|++.++.||++|.++|+++|+|
T Consensus 332 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~eR~~~l~g~~~~I~irg~t~~~l~E~er~i~DAl~a~r~a~~~gvV 411 (529)
T CHL00093 332 IIADGNEEQVKARCEQLRKQIEIADSSYEKEKLQERLAKLSGGVAVIKVGAATETEMKDKKLRLEDAINATKAAVEEGIV 411 (529)
T ss_pred EEecCcHHHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHhcCCeEEEEeccCcHHHHHHHHHHHHHHHHHHHHHHHcCcc
Confidence 11378899999999999999999999999999999999999999999999998 99999999999999999999999865
No 47
>KOG0357|consensus
Probab=99.89 E-value=1.2e-22 Score=215.30 Aligned_cols=206 Identities=26% Similarity=0.387 Sum_probs=157.6
Q ss_pred HHHHhcCCCeEEEecCCChhhHHhHHhhhcccccceeeecCCCCcchhhhhhhhhHhhhCCeEeccCCCCCcccccCccc
Q psy14622 482 ELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATLQDLAVATGGIVFGDEASPVKLEDLQATD 561 (788)
Q Consensus 482 e~~~~~~rpLLIIAedi~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~~~LeDiAilTGg~vis~~~~g~~l~~v~~~~ 561 (788)
+.+..++..|.|-.=.+|.||-..|..|++...++|-. | .+|-|||.|||+.+. .+++++.+.
T Consensus 149 ~~vK~~ga~l~icqwgfddeanhll~~n~lpavrwVGG---p--------EiEliAiaT~grIVp------rF~eL~~~k 211 (400)
T KOG0357|consen 149 QQIKETGANLAICQWGFDDEANHLLLQNNLPAVRWVGG---P--------EIELIAIATGGRIVP------RFSELTAEK 211 (400)
T ss_pred HHHHhhCCcEEEEecccCchhhhHHhhcCCCceeecCC---c--------ceEEEEeecCCeeec------cHhhhCHhh
Confidence 55555664444444599999999999999988888722 2 389999999999986 458899999
Q ss_pred ccceeEEE-----EecCceEEEcCCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHhhcCCeEEEEecCCchhhHHH
Q psy14622 562 LGSVGEIV-----ITKDDTLILKGKGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSEVEVNE 636 (788)
Q Consensus 562 LG~a~~V~-----vt~d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~~~~~~L~eRla~LsggvAvI~VGG~Te~EikE 636 (788)
||+|..|. -++|+..+++-+++..+ ++|.|.|.+..-+.|
T Consensus 212 LG~aglVrE~sfgttkdkmlviEqc~nska-----------------------------------VTifvRg~Nkmii~E 256 (400)
T KOG0357|consen 212 LGFAGLVREISFGTTKDKMLVIEQCKNSKA-----------------------------------VTIFVRGGNKMIIEE 256 (400)
T ss_pred ccccceEEEEecccccceEEEEEecCCCce-----------------------------------EEEEEecCcceeHHH
Confidence 99999984 48899999998877654 789999999999999
Q ss_pred HHHHHHHHHHHHHHHHHh-ccccCCchhHhhHHHHhhhhhccCccccCCChhhHHHHHHHHHHHHHhhcChhHHHHHHHH
Q psy14622 637 KKDRVTDALNATRAAVEE-GIVPGGGTALLRCIAVLDKLETANADQATGKKEDIDRRADQIRDQIEATTSDYEREKLQER 715 (788)
Q Consensus 637 rk~r~edAl~a~raA~e~-GiVpGGG~all~as~~L~~~~~~~~~~~~G~~~~i~~r~~~l~~~~~~~~~~~d~~~l~eR 715 (788)
-|..+.||||.+|+-+.+ -||-|||+|.+.|+-.+++-. |.-.| |++ +.
T Consensus 257 akrslhdalCvirnlird~rivYgGGaaEiscslav~~ea----d~~~g----~eq-------ya--------------- 306 (400)
T KOG0357|consen 257 AKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEA----DKIPG----IEQ-------YA--------------- 306 (400)
T ss_pred HHHHhhhhHHHHHHHhhcCeeEecCchHHhhhhhHhhHhh----ccCCc----HHH-------HH---------------
Confidence 999999999999999998 599999999999987764322 22223 000 00
Q ss_pred HHHhccCeEEEEecccHHHHHHHHhcchHHHHHHHhCCchHHHHHHHh-----cCCCCeeEEcCCCcccchhhcCC
Q psy14622 716 LARLASGVAVLKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVL-----ESSGEMGYDAMNNEYVNMIQKVL 786 (788)
Q Consensus 716 la~Lsggvavi~vGa~~~e~~e~~~r~~~a~~a~~Aa~e~g~Vv~~~~-----~~~~~~Gyda~~~~~~dm~~~Gi 786 (788)
+.-...++.....-.|.|+|++.=--+..++ +..+.+|.|+.-.---||-+.++
T Consensus 307 -----------------~rafa~ale~ipmalaensgl~pi~~ls~~ka~q~~~~~~~lGidcl~~G~nDMk~~~v 365 (400)
T KOG0357|consen 307 -----------------FRAFADALESIPMALAENSGLDPIETLSDVKARQVKEMNPALGIDCLHKGTNDMKEQHV 365 (400)
T ss_pred -----------------HHHHHHHHhhcchhhhhccCCCchhhhhHhHHHHHHhcCcccCcchhccCchhhhhhcc
Confidence 4445577777777899999999855555554 33567899988766677776654
No 48
>PRK00013 groEL chaperonin GroEL; Reviewed
Probab=99.87 E-value=4.7e-23 Score=237.52 Aligned_cols=380 Identities=27% Similarity=0.351 Sum_probs=251.6
Q ss_pred cccccCCCccccccccceeecccccccC--c---cccccccc-ccc-cccceeecchhhhhhhhhhhhhhhhhhHHHhhh
Q psy14622 230 AKDVRFGPEVRGLMLQGVDILADAMYRL--P---RVLRSQNL-TPL-LRAKVEFQDALVLLSESKISSIQSIIPALELAN 302 (788)
Q Consensus 230 ~k~~~~~~~~r~~~L~~~~i~~~~~~~t--p---~v~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (788)
+|++.||++++..++..+..+++.+..| | ++++.+++ .|. ||||++++|++.+.. +..|.++.++
T Consensus 2 ~~~~~~~~~a~~~~i~a~~~ia~~v~ttLGP~G~~kmi~~~~g~~~ITnDG~tIlk~i~~~h-p~~~~~akll------- 73 (542)
T PRK00013 2 AKDIKFGEDARRKLLRGVNKLADAVKVTLGPKGRNVVLEKSFGAPTITKDGVTVAKEIELED-PFENMGAQLV------- 73 (542)
T ss_pred CchhhchHHHHHHHHHHHHHHHHHhhccCCCCCCCEEEECCCCCeeEeccHHHHHHHccCCC-chhhHHHHHH-------
Confidence 4789999999999999999999999999 9 89999999 788 999999999998766 6667777774
Q ss_pred ccCCcceeeccc--cCCcceeeEe---eecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhh
Q psy14622 303 SKRKPLVILAED--VDGEALSTLV---VGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVI 377 (788)
Q Consensus 303 ~~~~~~~~~~~~--~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (788)
.+++.+-++ ||||||+++| +-+++.+-++.|.+|+.+.+|++.|.+.+++ .|+++
T Consensus 74 ---~e~a~~qd~e~GDGTTtvviLa~~LL~~a~~li~~Gi~P~~I~~G~~~A~~~~~~-----------------~L~~~ 133 (542)
T PRK00013 74 ---KEVASKTNDVAGDGTTTATVLAQAIVREGLKNVAAGANPMDLKRGIDKAVEAAVE-----------------ELKKI 133 (542)
T ss_pred ---HHHHHhcCcccCCccchHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH-----------------HHHHh
Confidence 333333333 9999999999 8889999999999999999999999999998 99999
Q ss_pred hhccccCCCCCchhhhhhhhhHHHHHHHHHHhhhccCCCCcEEEecCCccceeEEEEEee------Eecccccccccccc
Q psy14622 378 EGMKFDRGYISPYFIIELKLVLEYYIQTYIYLCLKVGKEGVITVKDGKTLTDELEVIEGM------KFDRGYISPYFINT 451 (788)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kvG~dGvItveeg~~~~~~lev~eG~------~fd~GylSpyfvt~ 451 (788)
+.|+.+++.+.+++.++.+.+.. +++.+++ .+-.=| .+| .+.+.++- +|-.|+. -+
T Consensus 134 a~~~~~~~~l~~va~ts~~~~~~-ls~lv~~---Av~~v~----~~g-----~i~i~~~~~~~~~~~~v~G~~-----~~ 195 (542)
T PRK00013 134 SKPVEDKEEIAQVATISANGDEE-IGKLIAE---AMEKVG----KEG-----VITVEESKGFETELEVVEGMQ-----FD 195 (542)
T ss_pred ccCCCCHHHHHHHHHhcccchHH-HHHHHHH---HHHHhC----cCC-----cEEEEEcCCCCceEEEEEeEE-----ec
Confidence 99998888999999999986544 4665555 232111 122 23333322 1112221 11
Q ss_pred cCCceeEeccceeecccccccchhhhHHHHHHHHhcCCCeEEEecCCChhhHHhHHhhhcccccceeeecCCCCcchhhh
Q psy14622 452 AKGAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKA 531 (788)
Q Consensus 452 ~e~~~v~l~~p~ILitD~kI~~i~~IlP~Le~~~~~~rpLLIIAedi~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~~ 531 (788)
+ .|.+||.....++ .-.....|.+++.+..=..+-. -..
T Consensus 196 ~-----g~~~~~~~~~~~~------------~~~~~~n~~Ilv~d~~i~~~~~------------------------l~~ 234 (542)
T PRK00013 196 R-----GYLSPYFVTDPEK------------MEAELENPYILITDKKISNIQD------------------------LLP 234 (542)
T ss_pred C-----CcccccccccccC------------CeEEEecCEEEEEcCccCCHHH------------------------HHH
Confidence 1 1333443322110 0112234777776541111111 112
Q ss_pred hhhhhHhhhCCeE-eccCCCCCcccccCccccccee-----EEEEecCceEEEcCCCCHHHHHHHHHHHHHHHHhcCChH
Q psy14622 532 TLQDLAVATGGIV-FGDEASPVKLEDLQATDLGSVG-----EIVITKDDTLILKGKGKKEDIDRRADQIRDQIEATTSDY 605 (788)
Q Consensus 532 ~LeDiAilTGg~v-is~~~~g~~l~~v~~~~LG~a~-----~V~vt~d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~~ 605 (788)
.++.| .-+|..+ +... .+++..+.+|=..+ +|.+ ++..+. ..
T Consensus 235 ~l~~i-~~~g~~lvi~~~----~I~~~al~~l~~~~~~g~~~i~a-------vr~~~~--------------------~~ 282 (542)
T PRK00013 235 VLEQV-AQSGKPLLIIAE----DVEGEALATLVVNKLRGTLKVVA-------VKAPGF--------------------GD 282 (542)
T ss_pred HHHHH-HHhCCCEEEECC----CCcHHHHHHHHHcCCcccceEEE-------EecCCc--------------------cc
Confidence 23333 2233332 2221 22333333332222 1211 221110 01
Q ss_pred HHHHHHHHHHhhcCCeEEEE-----ecCCchhhHHHHHHHHHHHHHHHHHHHHhccccCCchhHhhHHHHhhhhhccCcc
Q psy14622 606 EREKLQERLARLASGVAVLK-----VGGSSEVEVNEKKDRVTDALNATRAAVEEGIVPGGGTALLRCIAVLDKLETANAD 680 (788)
Q Consensus 606 ~~~~L~eRla~LsggvAvI~-----VGG~Te~EikErk~r~edAl~a~raA~e~GiVpGGG~all~as~~L~~~~~~~~~ 680 (788)
.|...-+||++++|+.++-. +.-.+..++ |. +..++- .+ ..-..-
T Consensus 283 ~r~~~l~~ia~~tG~~~i~~~~~~~~~~~~~~~L--------------------G~-----~~~v~~----~~-~~~~~i 332 (542)
T PRK00013 283 RRKAMLEDIAILTGGTVISEELGLKLEDATLEDL--------------------GQ-----AKKVVV----TK-DNTTIV 332 (542)
T ss_pred chhhhHHHHHHHcCCEEecccccCCcccCCHHHC--------------------Ce-----eeEEEE----ec-CEEEEE
Confidence 12345578999999988773 333332110 10 111110 00 000112
Q ss_pred ccCCChhhHHHHHHHHHHHHHhhcChhHHHHHHHHHHHhccCeEEEEecccH-HHHHHHHhcchHHHHHHHhCCchHHH
Q psy14622 681 QATGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSS-VEIVKKALRQPCMTIATNAGVDASVV 758 (788)
Q Consensus 681 ~~~G~~~~i~~r~~~l~~~~~~~~~~~d~~~l~eRla~Lsggvavi~vGa~~-~e~~e~~~r~~~a~~a~~Aa~e~g~V 758 (788)
.+.+++..|..|+++|+.++++++++|++++|+||+++|+|++++|.+||+| .++.|++.++.|++++.++|+++|+|
T Consensus 333 ~~~~~~~~i~~ri~~l~~~~~~~~~~~~~~~l~eRi~~l~g~~~tI~irG~t~~~l~E~er~i~Dal~~vk~al~~g~V 411 (542)
T PRK00013 333 DGAGDKEAIKARVAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGIV 411 (542)
T ss_pred eCCCCHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcCcc
Confidence 4678899999999999999999999999999999999999999999999998 99999999999999999999998765
No 49
>TIGR02348 GroEL chaperonin GroL. This family consists of GroEL, the larger subunit of the GroEL/GroES cytosolic chaperonin. It is found in bacteria, organelles derived from bacteria, and occasionally in the Archaea. The bacterial GroEL/GroES group I chaperonin is replaced a group II chaperonin, usually called the thermosome in the Archaeota and CCT (chaperone-containing TCP) in the Eukaryota. GroEL, thermosome subunits, and CCT subunits all fall under the scope of Pfam model pfam00118.
Probab=99.86 E-value=8e-23 Score=234.91 Aligned_cols=384 Identities=26% Similarity=0.319 Sum_probs=248.5
Q ss_pred ccccCCCccccccccceeecccccccC--c---cccccccc-ccc-cccceeecchhhhhhhhhhhhhhhhhhHHHhhhc
Q psy14622 231 KDVRFGPEVRGLMLQGVDILADAMYRL--P---RVLRSQNL-TPL-LRAKVEFQDALVLLSESKISSIQSIIPALELANS 303 (788)
Q Consensus 231 k~~~~~~~~r~~~L~~~~i~~~~~~~t--p---~v~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (788)
|++.|++++|..+++++..+++.+..| | ++++..++ .|. ||||++++|++.+.. +..|.++.++
T Consensus 2 ~~~~~~~~a~~~~~~~~~~la~~v~ttlGP~G~~kmi~~~~g~~~iTnDG~tIlk~i~~~h-p~~~~~akll-------- 72 (524)
T TIGR02348 2 KQIKFDEEARKALLRGVDKLADAVKVTLGPKGRNVVLEKSFGAPTITKDGVTVAKEIELED-KFENMGAQLV-------- 72 (524)
T ss_pred ccccccHHHHHHHHHHHHHHHHHhccCcCCCCCcEEEECCCCCeeEeccHHHHHHHccCCC-hhhHHHHHHH--------
Confidence 678999999999999999999999999 9 88888888 788 999999999998766 6677787774
Q ss_pred cCCcceeeccc--cCCcceeeEe---eecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhh
Q psy14622 304 KRKPLVILAED--VDGEALSTLV---VGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIE 378 (788)
Q Consensus 304 ~~~~~~~~~~~--~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (788)
.+++.+-++ ||||||+++| +-+++.+-++.|.+|+.+.+|++.|.+.+++ .|++++
T Consensus 73 --~~~a~~qd~e~GDGTTtvviLa~~Ll~~a~~li~~GihP~~Ii~G~~~A~~~~l~-----------------~L~~~s 133 (524)
T TIGR02348 73 --KEVASKTNDVAGDGTTTATVLAQAIVKEGLKNVAAGANPIELKRGIEKAVEAAVE-----------------ELKKLS 133 (524)
T ss_pred --HHHHHccCceeCCCcchHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHH-----------------HHHHhc
Confidence 333443344 9999999999 8899999999999999999999999999998 899999
Q ss_pred hccccCCCCCchhhhhhhhhHHHHHHHHHHhhhccCCCCcEEEecCCccceeEEEEEeeEe-cccccccccccccCCcee
Q psy14622 379 GMKFDRGYISPYFIIELKLVLEYYIQTYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKF-DRGYISPYFINTAKGAKV 457 (788)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kvG~dGvItveeg~~~~~~lev~eG~~f-d~GylSpyfvt~~e~~~v 457 (788)
.++.+.+.+.+++.++++.+.. +++.+++ .+..=| .+| .+.+..|-.. +.-++..-++-+.
T Consensus 134 ~~~~~~~~l~~va~ts~~~~~~-l~~lv~~---A~~~v~----~~~-----~i~v~~g~~~~~~s~~v~G~~~~~----- 195 (524)
T TIGR02348 134 KPVKGKKEIAQVATISANNDEE-IGSLIAE---AMEKVG----KDG-----VITVEESKSLETELEVVEGMQFDR----- 195 (524)
T ss_pred cCCCCHHHHHHHHHHhccChHH-HHHHHHH---HHHHhC----cCC-----cEeeecCCCccccEEEEEeEEEcC-----
Confidence 9998888899999999987644 4665555 232211 122 2333332211 1111111111111
Q ss_pred EeccceeecccccccchhhhHHHHHHHHhcCCCeEEEecCCChhhHHhHHhhhcccccceeeecCCCCcchhhhhhhhhH
Q psy14622 458 EFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATLQDLA 537 (788)
Q Consensus 458 ~l~~p~ILitD~kI~~i~~IlP~Le~~~~~~rpLLIIAedi~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~~~LeDiA 537 (788)
.|.+||.. ++.+ ..-.....|.+++.+..-.++-. -..+|+.+
T Consensus 196 g~~~~~~~-~~~~-----------~~~~~~~n~~Ili~d~~i~~~~~------------------------i~~~l~~i- 238 (524)
T TIGR02348 196 GYISPYFV-TDAE-----------KMEVELENPYILITDKKISNIKD------------------------LLPLLEKV- 238 (524)
T ss_pred CCCCcccc-cCcc-----------CCeEEeeCceeeeccCCcCCHHH------------------------HHHHHHHH-
Confidence 13334433 2211 00111234666664331011111 02223332
Q ss_pred hhhCCeE-eccCCCCCcccccCccccccee-----EEEEecCceEEEcCCCCHHHHHHHHHHHHHHHHhcCChHHHHHHH
Q psy14622 538 VATGGIV-FGDEASPVKLEDLQATDLGSVG-----EIVITKDDTLILKGKGKKEDIDRRADQIRDQIEATTSDYEREKLQ 611 (788)
Q Consensus 538 ilTGg~v-is~~~~g~~l~~v~~~~LG~a~-----~V~vt~d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~~~~~~L~ 611 (788)
.-+|..+ +... .+++..+.+|=..+ .|. .++-.+- ...|+..-
T Consensus 239 ~~~g~~lvi~~~----~i~~~al~~l~~n~~~~~~~i~-------avr~~~~--------------------~~~r~~~l 287 (524)
T TIGR02348 239 AQSGKPLLIIAE----DVEGEALATLVVNKLRGTLNVC-------AVKAPGF--------------------GDRRKAML 287 (524)
T ss_pred HHhCcCEEEECC----CCChHHHHHHHHhhcccccceE-------EEECCCc--------------------cchhhhhH
Confidence 2233332 2211 12222223232211 111 1221110 01123455
Q ss_pred HHHHhhcCCeEEE-----EecCCchhhHHHHHHHHHHHHHHHHHHHHhccccCCchhHhhHHHHhhhhhccCccccCCCh
Q psy14622 612 ERLARLASGVAVL-----KVGGSSEVEVNEKKDRVTDALNATRAAVEEGIVPGGGTALLRCIAVLDKLETANADQATGKK 686 (788)
Q Consensus 612 eRla~LsggvAvI-----~VGG~Te~EikErk~r~edAl~a~raA~e~GiVpGGG~all~as~~L~~~~~~~~~~~~G~~ 686 (788)
+||++++|+.++- ++.-.++.+ -|- +..+.-. + .....-.+.|++
T Consensus 288 ~~ia~~tG~~~i~~~~~~~~~~~~~~~------------------------LG~-~~~v~~~----~-~~~~~i~~~~~~ 337 (524)
T TIGR02348 288 EDIAILTGGQVISEELGLKLEEVTLDD------------------------LGK-AKKVTVD----K-DNTTIVEGAGDK 337 (524)
T ss_pred HHHHHHhCCEEecccccCCcCcCCHHH------------------------CCC-ceEEEEe----e-cEEEEEcCCCCH
Confidence 7899999988876 333333211 010 1111100 0 000112357889
Q ss_pred hhHHHHHHHHHHHHHhhcChhHHHHHHHHHHHhccCeEEEEecccH-HHHHHHHhcchHHHHHHHhCCchHHH
Q psy14622 687 EDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSS-VEIVKKALRQPCMTIATNAGVDASVV 758 (788)
Q Consensus 687 ~~i~~r~~~l~~~~~~~~~~~d~~~l~eRla~Lsggvavi~vGa~~-~e~~e~~~r~~~a~~a~~Aa~e~g~V 758 (788)
..+..|++++++++++++++||+++|+||+++|+|++++|.+||+| .++.|++.++.|++++.|+|+++|+|
T Consensus 338 ~~~~~ri~~l~~~~~~~~~~~~~~~l~eR~~~l~~~~~tI~irG~t~~~l~E~er~i~Dal~~~r~a~~~g~V 410 (524)
T TIGR02348 338 AAIKARVAQIKAQIEETTSDYDREKLQERLAKLAGGVAVIKVGAATETEMKEKKLRVEDALNATRAAVEEGIV 410 (524)
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 9999999999999999999999999999999999999999999998 99999999999999999999998755
No 50
>PRK12850 groEL chaperonin GroEL; Reviewed
Probab=99.86 E-value=1.6e-22 Score=233.34 Aligned_cols=389 Identities=26% Similarity=0.322 Sum_probs=250.5
Q ss_pred cccccCCCccccccccceeecccccccC--c---cccccccc-ccc-cccceeecchhhhhhhhhhhhhhhhhhHHHhhh
Q psy14622 230 AKDVRFGPEVRGLMLQGVDILADAMYRL--P---RVLRSQNL-TPL-LRAKVEFQDALVLLSESKISSIQSIIPALELAN 302 (788)
Q Consensus 230 ~k~~~~~~~~r~~~L~~~~i~~~~~~~t--p---~v~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (788)
.|++.|++++|..++.++..+++++..| | ++++..++ .|. ||||+++++++.+.. +..|+++.++
T Consensus 3 ~~~~~~~~~a~~~~~~~~~~la~~v~tTLGP~G~~kmi~~~~G~~~ITnDG~tIlk~i~i~h-p~~~~ga~ll------- 74 (544)
T PRK12850 3 AKEIRFSTDARDRLLRGVNILANAVKVTLGPKGRNVVLEKSFGAPRITKDGVTVAKEIELED-KFENMGAQMV------- 74 (544)
T ss_pred cceecccHHHHHHHHHHHHHHHHHHhCCcCCCCCCEEEECCCCCeeEeccHHHHHHHhcCCC-hhhhHHHHHH-------
Confidence 4889999999999999999999999999 9 88998999 888 999999999998766 7778888874
Q ss_pred ccCCcceeeccc--cCCcceeeEe---eecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhh
Q psy14622 303 SKRKPLVILAED--VDGEALSTLV---VGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVI 377 (788)
Q Consensus 303 ~~~~~~~~~~~~--~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (788)
.+++..-++ ||||||+++| +-+++.+-++.|.+|+.+.+|+++|.+.+++ .|+++
T Consensus 75 ---~~~a~~qd~e~GDGTTt~viLa~~LL~~a~~li~~GihP~~I~~G~~~a~~~~~~-----------------~L~~~ 134 (544)
T PRK12850 75 ---KEVASKTNDLAGDGTTTATVLAQAIVREGAKLVAAGMNPMDLKRGIDLAVAAVVD-----------------ELKKI 134 (544)
T ss_pred ---HHHHhhhcchhcCCcchHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHH-----------------HHHHh
Confidence 333333333 9999999999 8899999999999999999999999999998 99999
Q ss_pred hhccccCCCCCchhhhhhhhhHHHHHHHHHHhhhccCCCCcEEEecCCccceeEEEEE----eeEecccccccccccccC
Q psy14622 378 EGMKFDRGYISPYFIIELKLVLEYYIQTYIYLCLKVGKEGVITVKDGKTLTDELEVIE----GMKFDRGYISPYFINTAK 453 (788)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kvG~dGvItveeg~~~~~~lev~e----G~~fd~GylSpyfvt~~e 453 (788)
+.++.+.+.+.+++.++.+++.. +++.+++ .+..=| ++| ...++..+ -+.|-+|+. -+.
T Consensus 135 s~~v~~~~~l~~va~~s~~~~~~-l~~lv~e---Av~~vg----~~g---~i~v~~~~~~g~~~~~v~G~~-----~~~- 197 (544)
T PRK12850 135 AKKVTSSKEIAQVATISANGDES-IGEMIAE---AMDKVG----KEG---VITVEEAKTLGTELDVVEGMQ-----FDR- 197 (544)
T ss_pred ccCCCCHHHHHHHHHHhcCCHHH-HHHHHHH---HHHHhc----ccC---ceeeEEccccCcceEEEEeEE-----ecC-
Confidence 99998888899999999888643 4665554 233211 222 11222222 111222221 011
Q ss_pred CceeEeccceeecccccccchhhhHHHHHHHHhcCCCeEEEecC-CChhhHHhHHhhhcccccceeeecCCCCcchhhhh
Q psy14622 454 GAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAED-VDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKAT 532 (788)
Q Consensus 454 ~~~v~l~~p~ILitD~kI~~i~~IlP~Le~~~~~~rpLLIIAed-i~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~~~ 532 (788)
.+.+||+. ++.+ ........|.+++.+. ++. . .. =...
T Consensus 198 ----g~~~p~~~-~~~~-----------~~~~~~~n~~Ill~d~~i~~-~-~~-----------------------i~~~ 236 (544)
T PRK12850 198 ----GYLSPYFV-TNPE-----------KMRAELEDPYILLHEKKISN-L-QD-----------------------LLPI 236 (544)
T ss_pred ----ccCcCccc-cccc-----------cCeEEEeCCEEEEEecccCC-H-HH-----------------------HHHH
Confidence 22334432 2211 0111223476666543 221 0 00 0112
Q ss_pred hhhhHhhhCCeE-eccCCCCCcccccCcccccceeEEEEecCceEEEcC--CCCHHHHHHHHHHHHHHHHhcCChHHHHH
Q psy14622 533 LQDLAVATGGIV-FGDEASPVKLEDLQATDLGSVGEIVITKDDTLILKG--KGKKEDIDRRADQIRDQIEATTSDYEREK 609 (788)
Q Consensus 533 LeDiAilTGg~v-is~~~~g~~l~~v~~~~LG~a~~V~vt~d~Ttii~g--~g~~~~I~~R~~~l~~~~~~~~s~~~~~~ 609 (788)
++.+. -+|..+ |... ..++..+.+|=..+- . ..-+++.++. .+. -|..
T Consensus 237 l~~i~-~~g~~lvI~~~----~I~d~al~~l~~n~i-~-~~~~~~avk~p~~g~----------------------~~~~ 287 (544)
T PRK12850 237 LEAVV-QSGRPLLIIAE----DVEGEALATLVVNKL-R-GGLKSVAVKAPGFGD----------------------RRKA 287 (544)
T ss_pred HHHHH-HhCCCEEEECC----CCChHHHHHHHHcCC-c-ccceEEEEeCCCcCc----------------------ccHH
Confidence 33322 234332 2211 122222222211110 0 0000111221 111 1234
Q ss_pred HHHHHHhhcCCeEEEEecCCchhhHHHHHHHHHHHHHHHHHHHHhccccCCchhHhhHHHHhhhhhccCccccCCChhhH
Q psy14622 610 LQERLARLASGVAVLKVGGSSEVEVNEKKDRVTDALNATRAAVEEGIVPGGGTALLRCIAVLDKLETANADQATGKKEDI 689 (788)
Q Consensus 610 L~eRla~LsggvAvI~VGG~Te~EikErk~r~edAl~a~raA~e~GiVpGGG~all~as~~L~~~~~~~~~~~~G~~~~i 689 (788)
.-+||++++|+.++-.--|.+-.++..- +. |. +..++.. + ..-..-.+.++|..|
T Consensus 288 ~le~ia~~tG~~~i~~~~~~~~~~~~~~-~L--------------G~-----~~~v~~~----~-~~~~~i~g~~~~~~i 342 (544)
T PRK12850 288 MLEDIAVLTGGQVISEDLGIKLENVTLD-ML--------------GR-----AKRVLIT----K-ENTTIIDGAGDKKNI 342 (544)
T ss_pred HHHHHHHHhCCEEeccccCCCcccCCHH-Hc--------------CC-----CcEEEEE----e-eeEEEEeCCCCHHHH
Confidence 5578999999888763222221111110 00 11 1111100 0 000112367899999
Q ss_pred HHHHHHHHHHHHhhcChhHHHHHHHHHHHhccCeEEEEecccH-HHHHHHHhcchHHHHHHHhCCchHHH
Q psy14622 690 DRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSS-VEIVKKALRQPCMTIATNAGVDASVV 758 (788)
Q Consensus 690 ~~r~~~l~~~~~~~~~~~d~~~l~eRla~Lsggvavi~vGa~~-~e~~e~~~r~~~a~~a~~Aa~e~g~V 758 (788)
..|+++++++++++.+.|++++|+||+++|+|++++|.+||+| .++.|++.++.||+++.++|+++|+|
T Consensus 343 ~~ri~~l~~~~~~~~~~~~~~~l~eR~~~l~~~~~tI~irG~t~~~l~E~er~i~DAl~~~k~a~~~g~V 412 (544)
T PRK12850 343 EARVKQIRAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRVDDALHATRAAVEEGIV 412 (544)
T ss_pred HHHHHHHHHHHHhcccHHHHHHHHHHHHHhcCCeEEEEECCCcHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 9999999999999999999999999999999999999999998 99999999999999999999998765
No 51
>PTZ00114 Heat shock protein 60; Provisional
Probab=99.85 E-value=2e-22 Score=233.08 Aligned_cols=381 Identities=26% Similarity=0.333 Sum_probs=254.7
Q ss_pred cccccCCCccccccccceeecccccccC--c---cccccccc-ccc-cccceeecchhhhhhhhhhhhhhhhhhHHHhhh
Q psy14622 230 AKDVRFGPEVRGLMLQGVDILADAMYRL--P---RVLRSQNL-TPL-LRAKVEFQDALVLLSESKISSIQSIIPALELAN 302 (788)
Q Consensus 230 ~k~~~~~~~~r~~~L~~~~i~~~~~~~t--p---~v~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (788)
.++..+|++++..++.++..+++.+..| | ++++..+| .|. ||||++++|++.+.. +..|.++.++
T Consensus 14 ~~~~~~~~~a~~~~i~~~~~la~~v~tTLGP~G~~kmi~~~~g~~~ITnDG~TIlk~i~~~~-p~~~~~a~ll------- 85 (555)
T PTZ00114 14 GKEIRFGDEARQSLLKGIERLADAVAVTLGPKGRNVIIEQEYGSPKITKDGVTVAKAIEFSD-RFENVGAQLI------- 85 (555)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHhccCCCCCCcEEEECCCCCeEEeeChHHHHHhcCcCC-cchhHHHHHH-------
Confidence 3578889999999999999999999999 9 89999999 888 999999999998766 6778888884
Q ss_pred ccCCcceeeccc--cCCcceeeEe---eecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhh
Q psy14622 303 SKRKPLVILAED--VDGEALSTLV---VGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVI 377 (788)
Q Consensus 303 ~~~~~~~~~~~~--~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (788)
.+++.+-++ ||||||+++| +-+++.+-++.|.+|+.+.+|+++|.+.|++ .|+++
T Consensus 86 ---~~~a~~qd~evGDGTTtvvvLa~~LL~~a~~li~~GihP~~I~~G~~~A~~~~~~-----------------~L~~~ 145 (555)
T PTZ00114 86 ---RQVASKTNDKAGDGTTTATILARAIFREGCKAVAAGLNPMDLKRGIDLAVKVVLE-----------------SLKEQ 145 (555)
T ss_pred ---HHHHHhhccccCCcccHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHH-----------------HHHHh
Confidence 444444444 9999999999 8999999999999999999999999999998 99999
Q ss_pred hhccccCCCCCchhhhhhhhhHHHHHHHHHHhhhccCCCCcEEEecCCccceeEEEEEee------Eecccccccccccc
Q psy14622 378 EGMKFDRGYISPYFIIELKLVLEYYIQTYIYLCLKVGKEGVITVKDGKTLTDELEVIEGM------KFDRGYISPYFINT 451 (788)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kvG~dGvItveeg~~~~~~lev~eG~------~fd~GylSpyfvt~ 451 (788)
+.++.+.+.+.+++.++++++.. +++.+++ .+-.=| ++| .+.+..|- +|-.|+. -+
T Consensus 146 s~~v~~~~~l~~va~ts~~~~~~-l~~li~e---Av~~vg----~~g-----~I~~~~g~~~~ds~~~v~G~~-----~~ 207 (555)
T PTZ00114 146 SRPVKTKEDILNVATISANGDVE-IGSLIAD---AMDKVG----KDG-----TITVEDGKTLEDELEVVEGMS-----FD 207 (555)
T ss_pred ccCCCCHHHHHHHHHHHcCChHH-HHHHHHH---HHHHhC----cCC-----cEEEcCCCCccceEEEEEEEE-----Ee
Confidence 99998888899999999987654 4666665 232111 122 24443342 2222322 01
Q ss_pred cCCceeEeccceeecccccccchhhhHHHHHHHHhcCCCeEEEec-CCChhhHHhHHhhhcccccceeeecCCCCcchhh
Q psy14622 452 AKGAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAE-DVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRK 530 (788)
Q Consensus 452 ~e~~~v~l~~p~ILitD~kI~~i~~IlP~Le~~~~~~rpLLIIAe-di~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~ 530 (788)
. .|.+||.. +|++ ........|.+++.+ .++. +-.. .
T Consensus 208 ~-----g~~~~~~~-~~~~-----------~~~~~l~~~~Ili~d~~L~~-~~~i------------------------~ 245 (555)
T PTZ00114 208 R-----GYISPYFV-TNEK-----------TQKVELENPLILVTDKKISS-IQSI------------------------L 245 (555)
T ss_pred c-----cccccccc-cccc-----------cCeEEecCCEEEEEcCCCCC-HHHH------------------------H
Confidence 1 12334332 3332 011223457777753 4441 1000 1
Q ss_pred hhhhhhHhhhCCeE--eccCCCCCcccccCccccccee-----EEEEecCceEEEcC--CCCHHHHHHHHHHHHHHHHhc
Q psy14622 531 ATLQDLAVATGGIV--FGDEASPVKLEDLQATDLGSVG-----EIVITKDDTLILKG--KGKKEDIDRRADQIRDQIEAT 601 (788)
Q Consensus 531 ~~LeDiAilTGg~v--is~~~~g~~l~~v~~~~LG~a~-----~V~vt~d~Ttii~g--~g~~~~I~~R~~~l~~~~~~~ 601 (788)
..|+. ..-+|..+ +..+ +++..+.+|=..+ +| +.+.- .|+.
T Consensus 246 ~~le~-i~~~~~~llI~~~~-----i~~~al~~L~~n~~~g~~~i-------~avk~~~~g~~----------------- 295 (555)
T PTZ00114 246 PILEH-AVKNKRPLLIIAED-----VEGEALQTLIINKLRGGLKV-------CAVKAPGFGDN----------------- 295 (555)
T ss_pred HHHHH-HHHhCCCEEEECCC-----CcHHHHHHHHHhCCCCceEE-------EEEecCCCCcc-----------------
Confidence 11222 22233332 2222 2222222222211 12 22322 1221
Q ss_pred CChHHHHHHHHHHHhhcCCeEEEEe-cCCchhhHHHHHHHHHHHHHHHHHHHHhccccCCchhHhhHHHHhhhhhccCcc
Q psy14622 602 TSDYEREKLQERLARLASGVAVLKV-GGSSEVEVNEKKDRVTDALNATRAAVEEGIVPGGGTALLRCIAVLDKLETANAD 680 (788)
Q Consensus 602 ~s~~~~~~L~eRla~LsggvAvI~V-GG~Te~EikErk~r~edAl~a~raA~e~GiVpGGG~all~as~~L~~~~~~~~~ 680 (788)
+...-+||++++|+.++-.. -|....++.. .+. |. +-.+... +..+ -.-
T Consensus 296 -----~~~~l~~la~~tG~~~i~~~~~~~~l~~~~~-~~L--------------G~-----a~~v~~~----~~~~-~~~ 345 (555)
T PTZ00114 296 -----RKDILQDIAVLTGATVVSEDNVGLKLDDFDP-SML--------------GS-----AKKVTVT----KDET-VIL 345 (555)
T ss_pred -----hHHHHHHHHHHhCCEEecccccccCcccCCH-HHc--------------CC-----CceEEEE----eceE-EEE
Confidence 23445799999999988876 3222111111 000 00 1011100 0000 012
Q ss_pred ccCCChhhHHHHHHHHHHHHHhhcChhHHHHHHHHHHHhccCeEEEEecccH-HHHHHHHhcchHHHHHHHhCCchHHH
Q psy14622 681 QATGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSS-VEIVKKALRQPCMTIATNAGVDASVV 758 (788)
Q Consensus 681 ~~~G~~~~i~~r~~~l~~~~~~~~~~~d~~~l~eRla~Lsggvavi~vGa~~-~e~~e~~~r~~~a~~a~~Aa~e~g~V 758 (788)
.+.|+++.|+.|+++++.+++.+.++|++++|.||+++|+|++++|.+||+| .++.|++.++.|++++.++|+++|+|
T Consensus 346 ~~~~~~~~i~~r~~~l~~~~~~~~~~~~~~~l~eR~~~l~~~~~tI~i~G~t~~~l~E~~r~i~Dal~~~k~a~~~gvV 424 (555)
T PTZ00114 346 TGGGDKAEIKERVELLRSQIERTTSEYDKEKLKERLAKLSGGVAVIKVGGASEVEVNEKKDRIEDALNATRAAVEEGIV 424 (555)
T ss_pred eCCCcHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhcCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 4678999999999999999999999999999999999999999999999998 99999999999999999999998865
No 52
>PRK12849 groEL chaperonin GroEL; Reviewed
Probab=99.85 E-value=3.5e-22 Score=230.38 Aligned_cols=390 Identities=27% Similarity=0.316 Sum_probs=251.0
Q ss_pred cccccCCCccccccccceeecccccccC--c---cccccccc-ccc-cccceeecchhhhhhhhhhhhhhhhhhHHHhhh
Q psy14622 230 AKDVRFGPEVRGLMLQGVDILADAMYRL--P---RVLRSQNL-TPL-LRAKVEFQDALVLLSESKISSIQSIIPALELAN 302 (788)
Q Consensus 230 ~k~~~~~~~~r~~~L~~~~i~~~~~~~t--p---~v~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (788)
.|.+.||++++..++.++..+++.+..| | ++++..++ .|. ||||+++++++.+.. +..|.++.++
T Consensus 2 ~~~~~~~~~a~~~~~~~~~~la~~v~tTLGP~G~~kmi~~~~g~~~ITnDGaTIlk~i~~~h-p~~~~~a~ll------- 73 (542)
T PRK12849 2 AKIIKFDEEARRALERGVNKLADAVKVTLGPKGRNVVIDKSFGAPTITKDGVSIAKEIELED-PFENLGAQLV------- 73 (542)
T ss_pred CccccchHHHHHHHHHHHHHHHHHHhcccCCCCCCEEEECCCCCeeEeccHHHHHHHcccCC-ccHhHHHHHH-------
Confidence 4789999999999999999999999999 9 89999999 787 999999999998765 6677777774
Q ss_pred ccCCcceeeccc--cCCcceeeEe---eecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhh
Q psy14622 303 SKRKPLVILAED--VDGEALSTLV---VGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVI 377 (788)
Q Consensus 303 ~~~~~~~~~~~~--~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (788)
.+++.+-++ ||||||+++| +-+++.+-++.|.+|+.|.+|+++|.+.+++ .|+++
T Consensus 74 ---~~~a~~qd~e~GDGTTtvviLageLL~~a~~li~~GihP~~I~~G~~~A~~~~~~-----------------~L~~~ 133 (542)
T PRK12849 74 ---KEVASKTNDVAGDGTTTATVLAQALVQEGLKNVAAGANPMDLKRGIDKAVEAVVE-----------------ELKAL 133 (542)
T ss_pred ---HHHHHhcCCccCCCccHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHH-----------------HHHHh
Confidence 233333333 9999999999 8889999999999999999999999999999 99999
Q ss_pred hhccccCCCCCchhhhhhhhhHHHHHHHHHHhhhccCCCCcEEEecCCccceeEEEEEe------eEecccccccccccc
Q psy14622 378 EGMKFDRGYISPYFIIELKLVLEYYIQTYIYLCLKVGKEGVITVKDGKTLTDELEVIEG------MKFDRGYISPYFINT 451 (788)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kvG~dGvItveeg~~~~~~lev~eG------~~fd~GylSpyfvt~ 451 (788)
+.++.+.+.+.+++.++.+.+.. +++.+.+ .+-.=| .+| .+++..| +.|-.|+. -+
T Consensus 134 s~~~~~~~~l~~va~ts~~~~~~-l~~lv~~---Av~~v~----~~g-----~i~i~~g~~~~d~~~~v~G~~-----~~ 195 (542)
T PRK12849 134 ARPVSGSEEIAQVATISANGDEE-IGELIAE---AMEKVG----KDG-----VITVEESKTLETELEVTEGMQ-----FD 195 (542)
T ss_pred ccCCCCHHHHHHHHHHhcCChHH-HHHHHHH---HHHHhc----cCC-----cEeEEeCCCcceeEEEEEeEE-----Ee
Confidence 99999888899999999986644 3555544 232111 122 2333333 22333333 11
Q ss_pred cCCceeEeccceeecccccccchhhhHHHHHHHHhcCCCeEEEecCCChhhHHhHHhhhcccccceeeecCCCCcchhhh
Q psy14622 452 AKGAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKA 531 (788)
Q Consensus 452 ~e~~~v~l~~p~ILitD~kI~~i~~IlP~Le~~~~~~rpLLIIAedi~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~~ 531 (788)
. .|.+||... +.+ . . -.+...|.+++.+..-..+-+ -..
T Consensus 196 ~-----g~~~~~~~~-~~~-----~-~-----~~~~~n~~Ili~d~~i~~~~~------------------------~~~ 234 (542)
T PRK12849 196 R-----GYLSPYFVT-DPE-----R-M-----EAVLEDPLILLTDKKISSLQD------------------------LLP 234 (542)
T ss_pred c-----CcccCcccc-ccc-----C-c-----eEEeeCcEEEeecCCcCCHHH------------------------HHH
Confidence 1 133454322 221 0 0 012234666665431011100 111
Q ss_pred hhhhhHhhhCCeE-eccCCCCCcccccCcccccceeEEEEecCceEEEcCCCCHHHHHHHHHHHHHHHHhcCChHHHHHH
Q psy14622 532 TLQDLAVATGGIV-FGDEASPVKLEDLQATDLGSVGEIVITKDDTLILKGKGKKEDIDRRADQIRDQIEATTSDYEREKL 610 (788)
Q Consensus 532 ~LeDiAilTGg~v-is~~~~g~~l~~v~~~~LG~a~~V~vt~d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~~~~~~L 610 (788)
.|+.+. -+|..+ |... ..++..+.+|=..+ +. ..-+.+.++-.+. ...|...
T Consensus 235 ~l~~i~-~~~~~lvI~~~----~I~~~al~~l~~~~-~~-~~~~i~avr~~~~--------------------~~~r~~~ 287 (542)
T PRK12849 235 LLEKVA-QSGKPLLIIAE----DVEGEALATLVVNK-LR-GGLKVAAVKAPGF--------------------GDRRKAM 287 (542)
T ss_pred HHHHHH-HhCCCEEEECC----CCcHHHHHHHHHhh-hh-ccccEEEEeCCCc--------------------cchhHhH
Confidence 233332 223322 2211 12222222222110 00 0001222332110 1123455
Q ss_pred HHHHHhhcCCeEEEEecCCchhhHHHHHHHHHHHHHHHHHHHHhccccCCchhHhhHHHHhhhhhccCccccCCChhhHH
Q psy14622 611 QERLARLASGVAVLKVGGSSEVEVNEKKDRVTDALNATRAAVEEGIVPGGGTALLRCIAVLDKLETANADQATGKKEDID 690 (788)
Q Consensus 611 ~eRla~LsggvAvI~VGG~Te~EikErk~r~edAl~a~raA~e~GiVpGGG~all~as~~L~~~~~~~~~~~~G~~~~i~ 690 (788)
-+||++++|+.++-..-|.+-.++..- +. |. +..++... ++ -..-.+.+++..|.
T Consensus 288 l~~ia~~tGa~~v~~~~~~~~~~~~~~-~L--------------G~-----~~~v~~~~--~~---~~~i~g~~~~~~i~ 342 (542)
T PRK12849 288 LEDIAILTGGTVISEDLGLKLEEVTLD-DL--------------GR-----AKRVTITK--DN---TTIVDGAGDKEAIE 342 (542)
T ss_pred HHHHHHHhCCEEecccccCCcccCCHH-HC--------------ce-----eeEEEEee--ee---EEEEeCCCCHHHHH
Confidence 678999999888774333221111110 00 10 11111000 00 00123668999999
Q ss_pred HHHHHHHHHHHhhcChhHHHHHHHHHHHhccCeEEEEecccH-HHHHHHHhcchHHHHHHHhCCchHHH
Q psy14622 691 RRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSS-VEIVKKALRQPCMTIATNAGVDASVV 758 (788)
Q Consensus 691 ~r~~~l~~~~~~~~~~~d~~~l~eRla~Lsggvavi~vGa~~-~e~~e~~~r~~~a~~a~~Aa~e~g~V 758 (788)
.|+++|+.++++++++|++++|+||+++|+|++++|.+||+| .++.|++.++.|++++.++++++|+|
T Consensus 343 ~r~~~l~~~~~~~~~~~~~~~l~eR~~~l~~~~~TI~irG~t~~~l~E~er~i~DAl~~~~~a~~~g~V 411 (542)
T PRK12849 343 ARVAQIRRQIEETTSDYDREKLQERLAKLAGGVAVIKVGAATEVELKERKDRVEDALNATRAAVEEGIV 411 (542)
T ss_pred HHHHHHHHHHHhcCcHHHHHHHHHHHHHhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHcCee
Confidence 999999999999999999999999999999999999999998 99999999999999999999998755
No 53
>PRK12851 groEL chaperonin GroEL; Reviewed
Probab=99.84 E-value=1.1e-21 Score=226.15 Aligned_cols=387 Identities=27% Similarity=0.325 Sum_probs=250.5
Q ss_pred cccccCCCccccccccceeecccccccC--c---cccccccc-ccc-cccceeecchhhhhhhhhhhhhhhhhhHHHhhh
Q psy14622 230 AKDVRFGPEVRGLMLQGVDILADAMYRL--P---RVLRSQNL-TPL-LRAKVEFQDALVLLSESKISSIQSIIPALELAN 302 (788)
Q Consensus 230 ~k~~~~~~~~r~~~L~~~~i~~~~~~~t--p---~v~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (788)
.+.+.|+++++..++.++..+++++..| | ++++..++ .|. ||||+++++++.+.. +..|.++.++
T Consensus 3 ~~~~~~~~~a~~~~~~~~~~la~~v~tTlGP~G~~kmi~~~~g~~~ITnDG~tIlk~i~~~h-p~~~~~akll------- 74 (541)
T PRK12851 3 AKEVKFHVEAREKMLRGVNILADAVKVTLGPKGRNVVIDKSFGAPTITNDGVTIAKEIELED-KFENMGAQMV------- 74 (541)
T ss_pred cceecccHHHHHHHHHHHHHHHHHHhcCCCCCCCCEEEECCCCCeeEecCHHHHHHHccCCC-chhhHHHHHH-------
Confidence 4788999999999999999999999999 9 88898989 888 999999999998876 6667777774
Q ss_pred ccCCcceeeccc--cCCcceeeEe---eecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhh
Q psy14622 303 SKRKPLVILAED--VDGEALSTLV---VGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVI 377 (788)
Q Consensus 303 ~~~~~~~~~~~~--~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (788)
.+++.+-++ ||||||+++| +-+++.+-++.|.+|+.|.+|+++|.+.+++ .|+++
T Consensus 75 ---~~~a~~qd~e~GDGTTtvviLa~~LL~~a~~li~~Gihp~~I~~G~~~a~~~~~~-----------------~L~~~ 134 (541)
T PRK12851 75 ---REVASKTNDVAGDGTTTATVLAQAIVREGAKAVAAGANPMDLKRGIDRAVAAVVE-----------------ELKAN 134 (541)
T ss_pred ---HHHHHhhhHhhCCCccHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHH-----------------HHHHh
Confidence 333333333 9999999999 8889999999999999999999999999998 99999
Q ss_pred hhccccCCCCCchhhhhhhhhHHHHHHHHHHhhhccCCCCcEEEecCCccceeEEEEEe------eEecccccccccccc
Q psy14622 378 EGMKFDRGYISPYFIIELKLVLEYYIQTYIYLCLKVGKEGVITVKDGKTLTDELEVIEG------MKFDRGYISPYFINT 451 (788)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kvG~dGvItveeg~~~~~~lev~eG------~~fd~GylSpyfvt~ 451 (788)
+.++.+.+.+.+++.++.+.+.. +++.+++ .+-.=| .+| .+.+.++ +.|-.|+.- +
T Consensus 135 s~~~~~~~~l~~va~~s~~~~~~-l~~lv~~---Av~~vg----~~g-----~i~i~~~~~~~~~~~~~~G~~~-----~ 196 (541)
T PRK12851 135 ARPVTTNAEIAQVATISANGDAE-IGRLVAE---AMEKVG----NEG-----VITVEESKTAETELEVVEGMQF-----D 196 (541)
T ss_pred ccCCCCHHHHHHHHHHhccChHH-HHHHHHH---HHHHhc----ccC-----ceEEEEccCCCcceEEEEEEEe-----c
Confidence 99998888899999999876644 4666555 222111 122 1233222 222233321 1
Q ss_pred cCCceeEeccceeecccccccchhhhHHHHHHHHhcCCCeEEEec-CCChhhHHhHHhhhcccccceeeecCCCCcchhh
Q psy14622 452 AKGAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAE-DVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRK 530 (788)
Q Consensus 452 ~e~~~v~l~~p~ILitD~kI~~i~~IlP~Le~~~~~~rpLLIIAe-di~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~ 530 (788)
-.|.+||......+ .-.+...|.+++.+ .++. . ..+ .
T Consensus 197 -----~g~~~~~~~~~~~~------------~~~~~~~~~Ilv~d~~i~~-~-~~i-----------------------~ 234 (541)
T PRK12851 197 -----RGYLSPYFVTDADK------------MEAELEDPYILIHEKKISN-L-QDL-----------------------L 234 (541)
T ss_pred -----CCccccccccCCCC------------CeEEecccEEEEEcCCcCc-H-HHH-----------------------H
Confidence 12334544332111 01122357777754 3321 1 100 1
Q ss_pred hhhhhhHhhhCCeE-eccCCCCCcccccCcccccceeEEEEecCceEEEcC--CCCHHHHHHHHHHHHHHHHhcCChHHH
Q psy14622 531 ATLQDLAVATGGIV-FGDEASPVKLEDLQATDLGSVGEIVITKDDTLILKG--KGKKEDIDRRADQIRDQIEATTSDYER 607 (788)
Q Consensus 531 ~~LeDiAilTGg~v-is~~~~g~~l~~v~~~~LG~a~~V~vt~d~Ttii~g--~g~~~~I~~R~~~l~~~~~~~~s~~~~ 607 (788)
..|+.++ -+|..+ |... ..++..+.+|=..+- . .--+.+.++- .|+ -|
T Consensus 235 ~~l~~i~-~~~~~lvi~~~----~I~~~al~~l~~n~i-~-g~~~i~av~~p~~~~----------------------~~ 285 (541)
T PRK12851 235 PVLEAVV-QSGKPLLIIAE----DVEGEALATLVVNKL-R-GGLKVAAVKAPGFGD----------------------RR 285 (541)
T ss_pred HHHHHHH-HhCcCEEEECC----CCChHHHHHHHHcCC-c-CceeEEEEecCcccc----------------------cc
Confidence 1233332 233322 2211 122222222211110 0 0000111221 111 12
Q ss_pred HHHHHHHHhhcCCeEEEEecCCchhhHHHHHHHHHHHHHHHHHHHHhccccCCchhHhhHHHHhhhhhccCccccCCChh
Q psy14622 608 EKLQERLARLASGVAVLKVGGSSEVEVNEKKDRVTDALNATRAAVEEGIVPGGGTALLRCIAVLDKLETANADQATGKKE 687 (788)
Q Consensus 608 ~~L~eRla~LsggvAvI~VGG~Te~EikErk~r~edAl~a~raA~e~GiVpGGG~all~as~~L~~~~~~~~~~~~G~~~ 687 (788)
...-+||++++|+.++-...|.+-.++... +. |. +..+... + ..-..-.+.+++.
T Consensus 286 ~~~l~~ia~~tGa~~i~~~~~~~~~~~~~~-~L--------------G~-----~~~v~~~----~-~~~~~i~~~~~~~ 340 (541)
T PRK12851 286 KAMLEDIAILTGGTVISEDLGIKLENVTLE-QL--------------GR-----AKKVVVE----K-ENTTIIDGAGSKT 340 (541)
T ss_pred HhHHHHHHHHhCCEEeccCCCCCcCcCCHH-Hc--------------CC-----ccEEEEE----c-ceEEEEcCCCCHH
Confidence 344578999999988775433222221110 00 11 1111100 0 0001123567999
Q ss_pred hHHHHHHHHHHHHHhhcChhHHHHHHHHHHHhccCeEEEEecccH-HHHHHHHhcchHHHHHHHhCCchHHH
Q psy14622 688 DIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSS-VEIVKKALRQPCMTIATNAGVDASVV 758 (788)
Q Consensus 688 ~i~~r~~~l~~~~~~~~~~~d~~~l~eRla~Lsggvavi~vGa~~-~e~~e~~~r~~~a~~a~~Aa~e~g~V 758 (788)
.|..|+++++++++.++++|++++|+||+++|+|++++|.+||+| .++.|++.++.||++|.++|+++|+|
T Consensus 341 ~i~~ri~~l~~~~~~~~~~~~~~~l~~ri~~l~g~~~tI~irG~t~~~l~E~er~i~DAl~a~~~al~~g~V 412 (541)
T PRK12851 341 EIEGRVAQIRAQIEETTSDYDREKLQERLAKLAGGVAVIRVGASTEVEVKEKKDRVDDALHATRAAVEEGIV 412 (541)
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhcCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHcCcc
Confidence 999999999999999999999999999999999999999999998 99999999999999999999998865
No 54
>cd03344 GroEL GroEL_like type I chaperonin. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings, each composed of 7-9 subunits. The symmetry of type I is seven-fold and they are found in eubacteria (GroEL) and in organelles of eubacterial descent (hsp60 and RBP). With the aid of cochaperonin GroES, GroEL encapsulates non-native substrate proteins inside the cavity of the GroEL-ES complex and promotes folding by using energy derived from ATP hydrolysis.
Probab=99.82 E-value=8.4e-21 Score=218.08 Aligned_cols=387 Identities=27% Similarity=0.350 Sum_probs=247.1
Q ss_pred ccccCCCccccccccceeecccccccC--c---cccccccc-ccc-cccceeecchhhhhhhhhhhhhhhhhhHHHhhhc
Q psy14622 231 KDVRFGPEVRGLMLQGVDILADAMYRL--P---RVLRSQNL-TPL-LRAKVEFQDALVLLSESKISSIQSIIPALELANS 303 (788)
Q Consensus 231 k~~~~~~~~r~~~L~~~~i~~~~~~~t--p---~v~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (788)
|++.||++++..++.++..+++.+..| | ++++-.+| .|. ||||++++|++.+.. +..|.++.++ .|.+..
T Consensus 1 ~~~~~g~~a~~~~i~~~~~l~~~v~ttlGP~G~~kmi~~~~g~~~iTnDG~tIlk~i~~~h-p~~~~~a~ll--~~~a~~ 77 (520)
T cd03344 1 KDIKFGEEARKALLRGVNKLADAVKVTLGPKGRNVVIEKSFGSPKITKDGVTVAKEIELED-PFENMGAQLV--KEVASK 77 (520)
T ss_pred CcccchHHHHHHHHHHHHHHHHHHhCCcCCCCCcEEEECCCCCeEEEecHHHHHHHcccCC-cchhHHHHHH--HHHHhh
Confidence 578899999999999999999999999 9 89999999 888 999999999997765 6667777774 133332
Q ss_pred cCCcceeeccccCCcceeeEe---eecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhc
Q psy14622 304 KRKPLVILAEDVDGEALSTLV---VGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGM 380 (788)
Q Consensus 304 ~~~~~~~~~~~~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (788)
-+ .+-||||||+++| +-+++.+-++.|.+|..+.+|++.|.+.+++ .|++++.|
T Consensus 78 qd------~e~GDGTTtvviLa~~Ll~~~~~li~~gi~p~~I~~G~~~a~~~~~~-----------------~L~~~~~~ 134 (520)
T cd03344 78 TN------DVAGDGTTTATVLARAIIKEGLKAVAAGANPMDLKRGIEKAVEAVVE-----------------ELKKLSKP 134 (520)
T ss_pred hc------cccCCCcchHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHH-----------------HHHHhccC
Confidence 22 2229999999999 8889999999999999999999999999988 99999999
Q ss_pred cccCCCCCchhhhhhhhhHHHHHHHHHHhhhccCCCCcEEEecCCccceeEEEEEe------eEecccccccccccccCC
Q psy14622 381 KFDRGYISPYFIIELKLVLEYYIQTYIYLCLKVGKEGVITVKDGKTLTDELEVIEG------MKFDRGYISPYFINTAKG 454 (788)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kvG~dGvItveeg~~~~~~lev~eG------~~fd~GylSpyfvt~~e~ 454 (788)
+.+++.+.+++.++.+++.. +.+.+.+ .+-.=| .+| .+.+..| +.|-+||.= +.
T Consensus 135 i~~~~~l~~va~ts~~~~~~-l~~lv~~---A~~~v~----~~~-----~i~v~~g~~~~d~~~~~~G~~~-----~~-- 194 (520)
T cd03344 135 VKTKEEIAQVATISANGDEE-IGELIAE---AMEKVG----KDG-----VITVEEGKTLETELEVVEGMQF-----DR-- 194 (520)
T ss_pred CCCHHHHHHHHHHhcCChHH-HHHHHHH---HHHHhc----cCC-----cEEEEeCCCcceeEEEEeeEEe-----cC--
Confidence 99888999999999998644 4555555 232111 122 2344444 334444431 11
Q ss_pred ceeEeccceeecccccccchhhhHHHHHHHHhcCCCeEEEec-CCChhhHHhHHhhhcccccceeeecCCCCcchhhhhh
Q psy14622 455 AKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAE-DVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATL 533 (788)
Q Consensus 455 ~~v~l~~p~ILitD~kI~~i~~IlP~Le~~~~~~rpLLIIAe-di~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~~~L 533 (788)
.|.+|+.. ++.+ . ...+...|.+++.+ .++. +-. -..+|
T Consensus 195 ---g~~~~~~~-~~~~-~----------~~~~~~n~~Ili~d~~l~~-~~~------------------------l~~~l 234 (520)
T cd03344 195 ---GYLSPYFV-TDPE-K----------MEVELENPYILLTDKKISS-IQE------------------------LLPIL 234 (520)
T ss_pred ---CCCCCccc-cCcc-c----------CeEEeeCCEEEEECCCCCC-HHH------------------------HHHHH
Confidence 12234422 1211 0 00112346666643 2211 100 01112
Q ss_pred hhhHhhhCCeE-e-ccCCCCCcccccCcccccceeEEEEecCceEEEcC--CCCHHHHHHHHHHHHHHHHhcCChHHHHH
Q psy14622 534 QDLAVATGGIV-F-GDEASPVKLEDLQATDLGSVGEIVITKDDTLILKG--KGKKEDIDRRADQIRDQIEATTSDYEREK 609 (788)
Q Consensus 534 eDiAilTGg~v-i-s~~~~g~~l~~v~~~~LG~a~~V~vt~d~Ttii~g--~g~~~~I~~R~~~l~~~~~~~~s~~~~~~ 609 (788)
+.+ .-+|..+ + ..++.+..+.-+....+.... .++.+.- .++. +..
T Consensus 235 ~~i-~~~~~~lvi~~~~i~~~al~~l~~~~i~~~~-------~v~avk~~~~~~~----------------------~~~ 284 (520)
T cd03344 235 ELV-AKAGRPLLIIAEDVEGEALATLVVNKLRGGL-------KVCAVKAPGFGDR----------------------RKA 284 (520)
T ss_pred HHH-HhhCCCEEEEcCCCCHHHHHHHHHcCCccCc-------eEEEEeCCCCCcc----------------------cHH
Confidence 222 2233322 1 211111122111111111111 1222332 1111 223
Q ss_pred HHHHHHhhcCCeEEEEecCCchhhHHHHHHHHHHHHHHHHHHHHhccccCCchhHhhHHHHhhhhhccCccccCCChhhH
Q psy14622 610 LQERLARLASGVAVLKVGGSSEVEVNEKKDRVTDALNATRAAVEEGIVPGGGTALLRCIAVLDKLETANADQATGKKEDI 689 (788)
Q Consensus 610 L~eRla~LsggvAvI~VGG~Te~EikErk~r~edAl~a~raA~e~GiVpGGG~all~as~~L~~~~~~~~~~~~G~~~~i 689 (788)
--+||++++|+.++-.--|.+..++..- + -|- +..++... ..-..-.+.+++..|
T Consensus 285 ~l~~la~~tGa~~~~~~~~~~~~~~~~~-~------------------LG~-~~~v~~~~-----~~~~~i~~~~~~~~i 339 (520)
T cd03344 285 MLEDIAILTGGTVISEELGLKLEDVTLE-D------------------LGR-AKKVVVTK-----DDTTIIGGAGDKAAI 339 (520)
T ss_pred HHHHHHHHhCCEEecccccCCcccCCHH-H------------------CCc-ceEEEEee-----ceEEEEeCCCCHHHH
Confidence 3468999999888763222211111110 0 010 11111000 000112355788999
Q ss_pred HHHHHHHHHHHHhhcChhHHHHHHHHHHHhccCeEEEEecccH-HHHHHHHhcchHHHHHHHhCCchHHH
Q psy14622 690 DRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSS-VEIVKKALRQPCMTIATNAGVDASVV 758 (788)
Q Consensus 690 ~~r~~~l~~~~~~~~~~~d~~~l~eRla~Lsggvavi~vGa~~-~e~~e~~~r~~~a~~a~~Aa~e~g~V 758 (788)
+.|+++++.++++++++|++++|.||+++|+|++++|.+||+| .++.|++.++.|++++.++|+++|+|
T Consensus 340 ~~ri~~l~~~~~~~~~~~~~~~l~eR~~~l~~~~~TI~irG~t~~~l~E~~r~i~Dal~~~k~a~~~g~V 409 (520)
T cd03344 340 KARIAQIRKQIEETTSDYDKEKLQERLAKLSGGVAVIKVGGATEVELKEKKDRVEDALNATRAAVEEGIV 409 (520)
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhcCCeEEEEEecCcHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999999999999999999998 99999999999999999999998755
No 55
>cd03333 chaperonin_like chaperonin_like superfamily. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings, each composed of 7-9 subunits. There are 2 main chaperonin groups. The symmetry of type I is seven-fold and they are found in eubacteria (GroEL) and in organelles of eubacterial descent (hsp60 and RBP). The symmetry of type II is eight- or nine-fold and they are found in archea (thermosome), thermophilic bacteria (TF55) and in the eukaryotic cytosol (CTT). Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. This superfamily also contains related domains from Fab1-like phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinases that only contain the intermediate and apical domains.
Probab=99.78 E-value=4.7e-18 Score=173.03 Aligned_cols=192 Identities=33% Similarity=0.452 Sum_probs=155.0
Q ss_pred CCCchhhhhhhh----hHHHHHHHHHHhhhccCC------CCcEEEecCCcc-ceeEEEEEeeEecccccccccccccCC
Q psy14622 386 YISPYFIIELKL----VLEYYIQTYIYLCLKVGK------EGVITVKDGKTL-TDELEVIEGMKFDRGYISPYFINTAKG 454 (788)
Q Consensus 386 ~~~~~~~~~~~~----~~~~~~~~~~~~~~kvG~------dGvItveeg~~~-~~~lev~eG~~fd~GylSpyfvt~~e~ 454 (788)
.+.+++..+.++ ..+.+.+....+++.+++ .+.|.++...+- -.+-++++|+.|++||.+|+|
T Consensus 3 ~l~~ia~ts~~sk~~~~~~~l~~l~~~Av~~v~~~~~~~~~~~I~i~~~~gg~~~ds~li~Gv~~~~~~~~~~m------ 76 (209)
T cd03333 3 LLLQVATTSLNSKLSSWDDFLGKLVVDAVLKVGPDNRMDDLGVIKVEKIPGGSLEDSELVVGVVFDKGYASPYM------ 76 (209)
T ss_pred HHHHHHHHHhccchhhHHHHHHHHHHHHHHHhhccCCCCchHHEEEEEecCcChhhceeEeeEEEeccccCCCC------
Confidence 345566666653 466689999999999998 688988766651 123445789999999999998
Q ss_pred ceeEeccceeecccccccchhhhHHHHHHHHhcCCCeEEEecC-CChhhHHhHHhhhcccccceeeecCCCCcchhhhhh
Q psy14622 455 AKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAED-VDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATL 533 (788)
Q Consensus 455 ~~v~l~~p~ILitD~kI~~i~~IlP~Le~~~~~~rpLLIIAed-i~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~~~L 533 (788)
...++||+||+++.+|+. ||++++ |++.|+..|..+ .+++|+.. ++..|
T Consensus 77 -~~~~~n~~Ill~~~~le~------------------vii~~~~I~~~al~~l~~~------~I~~v~~~-----~~~~l 126 (209)
T cd03333 77 -PKRLENAKILLLDCPLEY------------------VVIAEKGIDDLALHYLAKA------GIMAVRRV-----KKEDL 126 (209)
T ss_pred -CeEcCCCcEEEEeCCeeE------------------EEEecCcccHHHHHHHHHC------CCEEEEeC-----CHHHH
Confidence 357889999999999887 777776 999999999874 46788774 67789
Q ss_pred hhhHhhhCCeEeccCCCCCcccccCcccccceeEEEEecC---ceEEEcCCCCHHHHHHHHHHHHHHHHhcCChHHHHHH
Q psy14622 534 QDLAVATGGIVFGDEASPVKLEDLQATDLGSVGEIVITKD---DTLILKGKGKKEDIDRRADQIRDQIEATTSDYEREKL 610 (788)
Q Consensus 534 eDiAilTGg~vis~~~~g~~l~~v~~~~LG~a~~V~vt~d---~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~~~~~~L 610 (788)
+|||..|||++++. +++++.++||+|.++.+.+. ..+++.+...
T Consensus 127 ~~ia~~tga~ii~~------~~~~~~~~lG~~~~v~~~~~~~~~~~~~~~~~~--------------------------- 173 (209)
T cd03333 127 ERIARATGATIVSS------LEDLTPEDLGTAELVEETKIGEEKLTFIEGCKG--------------------------- 173 (209)
T ss_pred HHHHHHHCCEEecc------cccCChhhceeeeEEEEEEECCeEEEEEEcCCC---------------------------
Confidence 99999999999984 46677889999999998775 2445554332
Q ss_pred HHHHHhhcCCeEEEEecCCchhhHHHHHHHHHHHHHHHHHHHHh
Q psy14622 611 QERLARLASGVAVLKVGGSSEVEVNEKKDRVTDALNATRAAVEE 654 (788)
Q Consensus 611 ~eRla~LsggvAvI~VGG~Te~EikErk~r~edAl~a~raA~e~ 654 (788)
++.++|.++|+|+.+++|.+..++||++|+++|+++
T Consensus 174 --------~~~~tIllrG~t~~~l~e~kr~l~dal~~~~~~~~~ 209 (209)
T cd03333 174 --------GKAATILLRGATEVELDEVKRSLHDALCAVRAAVEE 209 (209)
T ss_pred --------CCEEEEEEECCCHhHHHHHHHHHHHHHHHHHHHhhC
Confidence 668999999999999999999999999999999874
No 56
>COG0459 GroL Chaperonin GroEL (HSP60 family) [Posttranslational modification, protein turnover, chaperones]
Probab=99.77 E-value=6.1e-20 Score=210.57 Aligned_cols=156 Identities=19% Similarity=0.123 Sum_probs=141.7
Q ss_pred cccccCCCccccccccceeecccccccC--c---cccccccc-ccc-cccceeecchhhhhhhhhhhhhhhhhhHHHhhh
Q psy14622 230 AKDVRFGPEVRGLMLQGVDILADAMYRL--P---RVLRSQNL-TPL-LRAKVEFQDALVLLSESKISSIQSIIPALELAN 302 (788)
Q Consensus 230 ~k~~~~~~~~r~~~L~~~~i~~~~~~~t--p---~v~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (788)
.++..||.++|..++.++..+++++++| | ++.+.+++ .|. ||||++++|.+++ .|.++.++
T Consensus 3 ~~~~~~~~~a~~~~~~~~~~la~~vkttLGPkG~~k~l~~~~g~~~iTnDG~tIlkeiel-----ehp~akll------- 70 (524)
T COG0459 3 GKERKFGEDARRSNIRAARALADAVKTTLGPKGRNKMLVDSGGDITITNDGVTILKEIEL-----EHPGAKLL------- 70 (524)
T ss_pred cccccccHHHHHHHHHHHHHHHHHHHhccCCCcCceEEecCCCCEEEecCcceehhhhhc-----cCchhHHH-------
Confidence 5778899999999999999999999999 8 88888889 898 9999999999999 46676663
Q ss_pred ccCCcceeeccc--cCCcceeeEe---eecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhh
Q psy14622 303 SKRKPLVILAED--VDGEALSTLV---VGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVI 377 (788)
Q Consensus 303 ~~~~~~~~~~~~--~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (788)
.+++++-+| ||||||++|| +.+||.+-|++|.+|+.|.+|+++|...|++ +|+.+
T Consensus 71 ---~eva~~qd~e~GDGTTtavVLa~all~ea~~li~~gi~P~~I~~G~~~A~~~~~e-----------------~l~~~ 130 (524)
T COG0459 71 ---VEVAKKQDDEAGDGTTTAVVLAGALLKEAEKLIAAGIHPTVIKRGYRLAVEKAVE-----------------ELKEI 130 (524)
T ss_pred ---HHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH-----------------HHHHh
Confidence 455555555 9999999999 9999999999999999999999999999998 99999
Q ss_pred hhccccCC-----CCCchhhhhhhhhHHHHHHHHHHhhhccCCCCc
Q psy14622 378 EGMKFDRG-----YISPYFIIELKLVLEYYIQTYIYLCLKVGKEGV 418 (788)
Q Consensus 378 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~kvG~dGv 418 (788)
+.++.+.+ .++++++++++.+ +.+++.+++++++||.+..
T Consensus 131 a~~v~~~~~~~~~~~t~v~sk~~~~~-~~i~~lv~~Av~~v~~~~~ 175 (524)
T COG0459 131 AKPVSDSEEELKIAITSVASKSANSD-EEIGELVVEAVEKVGKEQS 175 (524)
T ss_pred hccCCcchhhhhhhhheeeeeeccCh-HHHHHHHHHHHHHhccccc
Confidence 99999988 9999999999999 8899999999999998654
No 57
>TIGR02342 chap_CCT_delta T-complex protein 1, delta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT delta chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=99.05 E-value=1.5e-11 Score=141.85 Aligned_cols=198 Identities=14% Similarity=0.108 Sum_probs=141.3
Q ss_pred cccccccceeecccccccC--c---cccccccc-ccc-cccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceee
Q psy14622 239 VRGLMLQGVDILADAMYRL--P---RVLRSQNL-TPL-LRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVIL 311 (788)
Q Consensus 239 ~r~~~L~~~~i~~~~~~~t--p---~v~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (788)
.+..++..+..+++.+..| | ++++..++ .|. ||||+++++++.+.. |. +.|+ .+++..
T Consensus 10 ~~~~ni~a~~~ia~~~kttlGP~G~~kmi~~~~g~~~ITnDG~tIlk~i~~~h-P~----akll----------~~~a~~ 74 (517)
T TIGR02342 10 VRTSNIVAAKAVADAIRTSLGPRGMDKMIQSGNGEVIITNDGATILKQMGVIH-PA----AKML----------VELSKA 74 (517)
T ss_pred HHHHHHHHHHHHHHHHhCCcCCCCCcEEEEcCCCCEEEeCCHHHHHHhccccC-hH----HHHH----------HHHHHH
Confidence 4445667777888999999 9 78888888 888 999999999997755 33 2331 222333
Q ss_pred ccc--cCCcceeeEe---eecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccc--cC
Q psy14622 312 AED--VDGEALSTLV---VGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKF--DR 384 (788)
Q Consensus 312 ~~~--~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 384 (788)
-++ ||||||+++| +-+++.+-++.|.+|+.+.+|+++|.+.|++ .|++++.|+. ++
T Consensus 75 qd~~~GDGTtt~viLa~~Ll~~a~~li~~gi~p~~Ii~g~~~a~~~~~~-----------------~L~~~~~~~~~~~~ 137 (517)
T TIGR02342 75 QDIEAGDGTTSVVILAGALLGACETLLERGIHPTTISESFQIAADEAIK-----------------ILDEMSIPVDLSDR 137 (517)
T ss_pred HHHHhCCCcchHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH-----------------HHHHhccccCccCH
Confidence 333 9999999999 8899999999999999999999999999998 8888888876 67
Q ss_pred CCCCchhhhhhhh-----hHHHHHHHHHHhhhccCC---CCcEEEecCCccceeEEEE--Ee-----eEecccccccccc
Q psy14622 385 GYISPYFIIELKL-----VLEYYIQTYIYLCLKVGK---EGVITVKDGKTLTDELEVI--EG-----MKFDRGYISPYFI 449 (788)
Q Consensus 385 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~kvG~---dGvItveeg~~~~~~lev~--eG-----~~fd~GylSpyfv 449 (788)
+.+.+++.++.++ ..+.|.....+++.+++. +|.+.+. .+.+. .| .+|-+|++=+.-+
T Consensus 138 ~~l~~va~tsl~sK~~~~~~~~ls~l~~~a~~~v~~~~~~~~~~~~-------~i~i~k~~Ggs~~ds~li~Givl~k~~ 210 (517)
T TIGR02342 138 EILIKSATTSLSSKVVSQYSSLLAPLAVDAVLKVIDPENDKNVDLN-------DIKVVKKLGGTIDDTELIEGLVFTQKA 210 (517)
T ss_pred HHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHhccccCCccCHH-------HeeEEeccCCChhhcEEEeeEEEeccc
Confidence 7788888888652 334467788888888875 3444221 22222 22 3455666622222
Q ss_pred cccCCceeEeccceeecccccccchh
Q psy14622 450 NTAKGAKVEFQDALVLLSESKISSIQ 475 (788)
Q Consensus 450 t~~e~~~v~l~~p~ILitD~kI~~i~ 475 (788)
..+.+|.-.+.||.|++.+..|+..+
T Consensus 211 ~~~~~mpk~i~n~kI~ll~~~Le~~~ 236 (517)
T TIGR02342 211 SRSAGGPTRIEKAKIGLIQFQISPPK 236 (517)
T ss_pred cccCCCCccccCCcEEEEecCCCCCc
Confidence 22224555578999999888776443
No 58
>cd03338 TCP1_delta TCP-1 (CTT or eukaryotic type II) chaperonin family, delta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=99.03 E-value=5.3e-11 Score=137.20 Aligned_cols=148 Identities=16% Similarity=0.066 Sum_probs=122.6
Q ss_pred cccccccceeecccccccC--c---cccccccc-ccc-cccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceee
Q psy14622 239 VRGLMLQGVDILADAMYRL--P---RVLRSQNL-TPL-LRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVIL 311 (788)
Q Consensus 239 ~r~~~L~~~~i~~~~~~~t--p---~v~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (788)
.+..+++.+..+++++..| | ++++..++ .|. ||||+++++++++.. |. +.|+. |. +.+
T Consensus 9 ~~~~ni~a~~~i~~~v~ttlGP~G~~k~i~~~~g~~~iTnDG~tIlk~l~~~h-p~----a~ll~--~~--------a~~ 73 (515)
T cd03338 9 VRLSNIQAAKAVADAIRTSLGPRGMDKMIQTGKGEVIITNDGATILKQMSVLH-PA----AKMLV--EL--------SKA 73 (515)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCCCCeeeeCCCCCEEEECcHHHHHHhCcCcC-HH----HHHHH--HH--------HHH
Confidence 3445667777888999999 9 88888888 888 999999999997765 33 33321 22 222
Q ss_pred ccc--cCCcceeeEe---eecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccc--cC
Q psy14622 312 AED--VDGEALSTLV---VGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKF--DR 384 (788)
Q Consensus 312 ~~~--~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 384 (788)
-++ ||||||+++| +.++|.+-++.|.+|+.+.+|+++|.+.|++ .|++++.++. ++
T Consensus 74 q~~~~GDGTtt~vvLa~~ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~-----------------~L~~~a~~v~~~~~ 136 (515)
T cd03338 74 QDIEAGDGTTSVVVLAGALLSACESLLKKGIHPTVISESFQIAAKKAVE-----------------ILDSMSIPVDLNDR 136 (515)
T ss_pred HHhHhcCCcchHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH-----------------HHHHhccCCCCCCH
Confidence 333 9999999999 8999999999999999999999999999999 8999999986 77
Q ss_pred CCCCchhhhhhhhh-----HHHHHHHHHHhhhccCCCCc
Q psy14622 385 GYISPYFIIELKLV-----LEYYIQTYIYLCLKVGKEGV 418 (788)
Q Consensus 385 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~kvG~dGv 418 (788)
+.+.++|.++.++. .+.+++.+++++++||.+|.
T Consensus 137 ~~l~~va~ts~~sK~~~~~~~~ls~li~~A~~~v~~~~~ 175 (515)
T cd03338 137 ESLIKSATTSLNSKVVSQYSSLLAPIAVDAVLKVIDPAT 175 (515)
T ss_pred HHHHHHHHHHhccccchhhHHHHHHHHHHHHHHhhcccc
Confidence 88999999999853 56689999999999998764
No 59
>cd00309 chaperonin_type_I_II chaperonin families, type I and type II. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings, each composed of 7-9 subunits. There are 2 main chaperonin groups. The symmetry of type I is seven-fold and they are found in eubacteria (GroEL) and in organelles of eubacterial descent (hsp60 and RBP). The symmetry of type II is eight- or nine-fold and they are found in archea (thermosome), thermophilic bacteria (TF55) and in the eukaryotic cytosol (CTT). Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis.
Probab=98.95 E-value=7e-11 Score=134.39 Aligned_cols=154 Identities=20% Similarity=0.190 Sum_probs=130.3
Q ss_pred cccCCCccccccccceeecccccccC--c---cccccccc-ccc-cccceeecchhhhhhhhhhhhhhhhhhHHHhhhcc
Q psy14622 232 DVRFGPEVRGLMLQGVDILADAMYRL--P---RVLRSQNL-TPL-LRAKVEFQDALVLLSESKISSIQSIIPALELANSK 304 (788)
Q Consensus 232 ~~~~~~~~r~~~L~~~~i~~~~~~~t--p---~v~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (788)
+..++++++..+++.+..+++.+..| | ++++..++ .|. ||||++++|++.+ .+.++.++
T Consensus 2 ~~~~~~~~~~~~~~~~~~l~~~v~tslGP~G~~k~i~~~~g~~~iTnDG~tIlk~i~~-----~hp~a~ll--------- 67 (464)
T cd00309 2 EREFGEEARLSNINAAKALADAVKTTLGPKGMDKMLVDSLGDPTITNDGATILKEIEV-----EHPAAKLL--------- 67 (464)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHhcccCCCcCcEEEEcCCCCeEEEccHHHHHHhccC-----cCHHHHHH---------
Confidence 45677778889999999999999999 9 89999999 888 9999999999977 34555553
Q ss_pred CCcceeeccc--cCCcceeeEe---eecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhh
Q psy14622 305 RKPLVILAED--VDGEALSTLV---VGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEG 379 (788)
Q Consensus 305 ~~~~~~~~~~--~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (788)
.+++.+-++ ||||||+++| +.+++.+-++.|.+|..+.+|++.|...|++ .|++++.
T Consensus 68 -~~~~~~~~~~~GDGTtt~viL~~~ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~-----------------~L~~~~~ 129 (464)
T cd00309 68 -VEVAKSQDDEVGDGTTTVVVLAGELLKEAEKLLAAGIHPTEIIRGYEKAVEKALE-----------------ILKEIAV 129 (464)
T ss_pred -HHHHHHHHhHhCCchhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH-----------------HHHHhcC
Confidence 233333333 9999999999 8899999999999999999999999999999 8899999
Q ss_pred c--cccCCCCCchhhhhhhh-----hHHHHHHHHHHhhhccCCCC
Q psy14622 380 M--KFDRGYISPYFIIELKL-----VLEYYIQTYIYLCLKVGKEG 417 (788)
Q Consensus 380 ~--~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~kvG~dG 417 (788)
+ ..+++.+.+++.++.++ ..+.+.+..+++++++|++-
T Consensus 130 ~~~~~~~~~l~~ia~tsl~sK~~~~~~~~l~~l~~~Ai~~v~~~~ 174 (464)
T cd00309 130 PIDVEDREELLKVATTSLNSKLVSGGDDFLGELVVDAVLKVGKEN 174 (464)
T ss_pred ccCCCCHHHHHHHhHhcccccccccchHHHHHHHHHHHHHhcccc
Confidence 8 77888999999998873 45567999999999998753
No 60
>cd03334 Fab1_TCP TCP-1 like domain of the eukaryotic phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinase Fab1. Fab1p is important for vacuole size regulation, presumably by modulating PtdIns(3,5)P2 effector activity. In the human homolog p235/PIKfyve deletion of this domain leads to loss of catalytic activity. However no exact function this domain has been defined. In general, chaperonins are involved in productive folding of proteins.
Probab=98.89 E-value=3e-08 Score=105.55 Aligned_cols=174 Identities=15% Similarity=0.209 Sum_probs=131.1
Q ss_pred cCCccceeEEEEEeeEecccccccccccccCCceeEeccceeecccccccc---------hhh--------hHHHHHHHH
Q psy14622 423 DGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESKISS---------IQS--------IIPALELAN 485 (788)
Q Consensus 423 eg~~~~~~lev~eG~~fd~GylSpyfvt~~e~~~v~l~~p~ILitD~kI~~---------i~~--------IlP~Le~~~ 485 (788)
.|.... .-++++|+-|+++..++-| .-.++||.|++.+..|+- +++ +.-.++.+.
T Consensus 56 ~Ggs~~-dS~li~Gvvi~k~~~~~~m-------~~~i~n~kIlll~~~Le~~~~~~~~~~~~~~~~~E~~~l~~~v~kI~ 127 (261)
T cd03334 56 PGGSPS-DSEVVDGVVFTKNVAHKRM-------PSKIKNPRILLLQGPLEYQRVENKLLSLDPVILQEKEYLKNLVSRIV 127 (261)
T ss_pred cCCCHH-HcEEEeeEEEeCCCCCccC-------CcccCCCcEEEEeeeeccccccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355554 4568899999998876544 335678999988877753 111 344556666
Q ss_pred hcCCCeEEEecCCChhhHHhHHhhhcccccceeeecCCCCcchhhhhhhhhHhhhCCeEeccCCCCCcccccCcccccce
Q psy14622 486 SKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATLQDLAVATGGIVFGDEASPVKLEDLQATDLGSV 565 (788)
Q Consensus 486 ~~~rpLLIIAedi~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~~~LeDiAilTGg~vis~~~~g~~l~~v~~~~LG~a 565 (788)
..+-.+++..+.|++.|+..|.-+++ .+++-+ .+..|+.||..|||++++.- .++++.+.||+|
T Consensus 128 ~~g~nvIl~~k~I~~~a~~~l~k~gI------~~v~~v-----~~~dl~rIa~~tGa~ii~~i-----~~~~~~~~lG~~ 191 (261)
T cd03334 128 ALRPDVILVEKSVSRIAQDLLLEAGI------TLVLNV-----KPSVLERISRCTGADIISSM-----DDLLTSPKLGTC 191 (261)
T ss_pred hcCCCEEEECCccCHHHHHHHHHCCC------EEEEec-----CHHHHHHHHHHhCCEEecCh-----hhhcCcccCcCc
Confidence 67777777788999999999987643 445444 46679999999999999861 235667889999
Q ss_pred eEEEEec--------CceEEEcCCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHhhcCCeEEEEecCCchhhHHHH
Q psy14622 566 GEIVITK--------DDTLILKGKGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSEVEVNEK 637 (788)
Q Consensus 566 ~~V~vt~--------d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~~~~~~L~eRla~LsggvAvI~VGG~Te~EikEr 637 (788)
++|.+.+ ..++++.|...+ ..++|-+.|+|+..++|-
T Consensus 192 ~~v~~~~ig~~~~~~~~~~~~~~~~~~-----------------------------------~~~TIlLRG~t~~~lde~ 236 (261)
T cd03334 192 ESFRVRTYVEEHGRSKTLMFFEGCPKE-----------------------------------LGCTILLRGGDLEELKKV 236 (261)
T ss_pred ceEEEEEecCcCCCceeEEEEecCCCC-----------------------------------ceeEEEEECCCHHHHHHH
Confidence 9997644 467777765443 248999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhc
Q psy14622 638 KDRVTDALNATRAAVEEG 655 (788)
Q Consensus 638 k~r~edAl~a~raA~e~G 655 (788)
+.-+.||+++++++..++
T Consensus 237 eR~i~Dal~v~~~~~le~ 254 (261)
T cd03334 237 KRVVEFMVFAAYHLKLET 254 (261)
T ss_pred HHHHHHHHHHHHHHHHhH
Confidence 999999999999988874
No 61
>TIGR02345 chap_CCT_eta T-complex protein 1, eta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT eta chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=98.88 E-value=1.5e-11 Score=142.13 Aligned_cols=147 Identities=11% Similarity=0.087 Sum_probs=116.2
Q ss_pred ccccccccceeecccccccC--c---ccccccccccc-cccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceee
Q psy14622 238 EVRGLMLQGVDILADAMYRL--P---RVLRSQNLTPL-LRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVIL 311 (788)
Q Consensus 238 ~~r~~~L~~~~i~~~~~~~t--p---~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (788)
++...++.-+..+++.+..| | ++++...+-|. ||||++++|++.+.. |. +.|+ .+++.+
T Consensus 18 ~~~~~ni~a~~~i~~~v~ttlGP~G~~k~i~~~~g~~iTnDG~TIlk~i~~~h-P~----a~ll----------~~~a~~ 82 (522)
T TIGR02345 18 GQLISNINACVAIAEILKTTLGPRGMDKLIVGKNGATVSNDGATILKLLDIVH-PA----AKTL----------VDIAKS 82 (522)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCCceEEECCCCcEEeCcHHHHHHHhcccC-hH----HHHH----------HHHHHH
Confidence 34445556666788888999 8 67777667677 999999999997765 33 3332 223333
Q ss_pred ccc--cCCcceeeEe---eecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccc----
Q psy14622 312 AED--VDGEALSTLV---VGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKF---- 382 (788)
Q Consensus 312 ~~~--~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 382 (788)
-++ ||||||+.+| +-+++.+-++.|.+|+.+.+|++.|.+.|++ .|.+++.++.
T Consensus 83 q~~~~GDGTTt~vvLa~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~-----------------~L~~~s~~~~~~~~ 145 (522)
T TIGR02345 83 QDSEVGDGTTSVVILAGELLKEAKPFIEEGVHPQLIIRCYREALMLAIE-----------------KLKEIAVTIDEVKG 145 (522)
T ss_pred HHHHhCCCchhHHHHHHHHHHhHHHHHHcCCCHHHHHHHHHHHHHHHHH-----------------HHHHhccCcCCccc
Confidence 333 9999999999 8899999999999999999999999999999 8888999987
Q ss_pred -cCCCCCchhhhhhh-----hhHHHHHHHHHHhhhccCCC
Q psy14622 383 -DRGYISPYFIIELK-----LVLEYYIQTYIYLCLKVGKE 416 (788)
Q Consensus 383 -~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~kvG~d 416 (788)
+++.+.+++.++.+ ...+.+++..++++.++|.+
T Consensus 146 ~~~~~l~~va~tsl~sK~~~~~~~~l~~l~~~A~~~v~~~ 185 (522)
T TIGR02345 146 EQREVLEKCAATALNSKLIAHEKEFFSKMIVDAVLQLDID 185 (522)
T ss_pred ccHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHhhc
Confidence 45678899998866 33566799999999999864
No 62
>cd03340 TCP1_eta TCP-1 (CTT or eukaryotic type II) chaperonin family, eta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=98.86 E-value=3e-10 Score=131.26 Aligned_cols=247 Identities=15% Similarity=0.196 Sum_probs=155.6
Q ss_pred ccceeecccccccC--c---cccccccc-ccc-cccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeeccc-c
Q psy14622 244 LQGVDILADAMYRL--P---RVLRSQNL-TPL-LRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAED-V 315 (788)
Q Consensus 244 L~~~~i~~~~~~~t--p---~v~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 315 (788)
++-+..+++.+..| | ++++..++ .|. ||||+++++++.+.. |. +.|+ .|.+.+ |.+. |
T Consensus 22 i~a~~~i~~~v~tslGP~G~~kmi~~~~g~~~iTnDG~tIlk~l~~~h-P~----akll--~~~a~~-------q~~~~G 87 (522)
T cd03340 22 INACQAIADAVRTTLGPRGMDKLIVDGRGKVTISNDGATILKLLDIVH-PA----AKTL--VDIAKS-------QDAEVG 87 (522)
T ss_pred HHHHHHHHHHHhcCCCCCcCceEEEcCCCCEEEeccHHHHHHHccccC-HH----HHHH--HHHHHH-------hHhHhC
Confidence 33444567777778 8 77777778 777 999999999998765 22 3332 022222 2222 9
Q ss_pred CCcceeeEe---eecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhcccc------CCC
Q psy14622 316 DGEALSTLV---VGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFD------RGY 386 (788)
Q Consensus 316 d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~ 386 (788)
|||||+++| +-+++.+.++.|.+|+.+.+|+++|.+.|++ .|++++.++.+ ++.
T Consensus 88 DGTtt~viL~~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~-----------------~L~~~s~~~~~~~~~~~~~~ 150 (522)
T cd03340 88 DGTTSVVVLAGEFLKEAKPFIEDGVHPQIIIRGYRKALQLAIE-----------------KIKEIAVNIDKEDKEEQREL 150 (522)
T ss_pred CChhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH-----------------HHHHhhcccCcccccccHHH
Confidence 999999999 8899999999999999999999999999998 88888888865 455
Q ss_pred CCchhhhhhh-----hhHHHHHHHHHHhhhccCCCCcEEEecCCccceeEEEEEeeEecccccccccccccCCceeEecc
Q psy14622 387 ISPYFIIELK-----LVLEYYIQTYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQD 461 (788)
Q Consensus 387 ~~~~~~~~~~-----~~~~~~~~~~~~~~~kvG~dGvItveeg~~~~~~lev~eG~~fd~GylSpyfvt~~e~~~v~l~~ 461 (788)
+.+++..+.+ ...+.+.+...+++.++|+++.. -...+.-..|-..+.-++ + +++ .|+.
T Consensus 151 l~~ia~t~l~sK~~~~~~~~l~~l~~~A~~~v~~~~~~-------~~I~i~~i~Ggs~~ds~l----v---~Gi--v~~k 214 (522)
T cd03340 151 LEKCAATALNSKLIASEKEFFAKMVVDAVLSLDDDLDL-------DMIGIKKVPGGSLEDSQL----V---NGV--AFKK 214 (522)
T ss_pred HHHHHHHHhccCcchhHHHHHHHHHHHHHHHhcccCCh-------hHheEeeecCCChhhcee----e---eeE--EEec
Confidence 7888887755 34677899999999999875421 011222223422221111 0 111 2222
Q ss_pred cee----ecccccccchhhhH--HHHHHHHhcCCCeEEEecCCCh-----hhHHhHHhhhcccc----cceeeecCCCCc
Q psy14622 462 ALV----LLSESKISSIQSII--PALELANSKRKPLVILAEDVDG-----EALSTLVVNRLKIG----LQVAAVKAPGFG 526 (788)
Q Consensus 462 p~I----LitD~kI~~i~~Il--P~Le~~~~~~rpLLIIAedi~~-----eAL~~Lv~N~~rg~----~~v~AVkaP~fG 526 (788)
.|. .-..+++.+++=++ --||+ .+.+.|+.+...+++. ++...++.|+++.. .+++.++.| ++
T Consensus 215 ~~~~~~~~~~~~~~~n~kIll~~~~Le~-~~~~~~~~i~i~~~~~~~~~~~~E~~~l~~~v~~i~~~g~~vvl~~~~-i~ 292 (522)
T cd03340 215 TFSYAGFEQQPKKFKNPKILLLNVELEL-KAEKDNAEVRVEDPEEYQAIVDAEWKIIYDKLEKIVKSGANVVLSKLP-IG 292 (522)
T ss_pred ccCccccccCCccccCCeEEEEeCCCCC-CccccceEEEECCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCC-Cc
Confidence 222 11123333332110 01122 1234466666666543 45555666666554 677777777 88
Q ss_pred chhhhhhhhhHhh
Q psy14622 527 DNRKATLQDLAVA 539 (788)
Q Consensus 527 ~~R~~~LeDiAil 539 (788)
+....+|.|..++
T Consensus 293 d~a~~~l~~~~I~ 305 (522)
T cd03340 293 DLATQYFADRDIF 305 (522)
T ss_pred HHHHHHHHHCCcE
Confidence 8888888776554
No 63
>TIGR02346 chap_CCT_theta T-complex protein 1, theta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT alpha chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=98.85 E-value=5e-10 Score=129.81 Aligned_cols=195 Identities=13% Similarity=0.095 Sum_probs=136.6
Q ss_pred cccccccceeecccccccC--c---cccccccc-ccc-cccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceee
Q psy14622 239 VRGLMLQGVDILADAMYRL--P---RVLRSQNL-TPL-LRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVIL 311 (788)
Q Consensus 239 ~r~~~L~~~~i~~~~~~~t--p---~v~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (788)
+...++..+..+++++..| | ++++-..+ .|. ||||++++|++.+.. |. +.|+ .|.+.+-+
T Consensus 19 ~~~~ni~a~~~l~~~vkttlGP~G~~kmi~~~~g~~~ITnDG~tIlk~i~~~h-P~----akll--~e~a~sqd------ 85 (531)
T TIGR02346 19 AVIKNIEACKELSNITRTSLGPNGMNKMVINHLDKLFVTNDAATILRELEVQH-PA----AKLL--VMASEMQE------ 85 (531)
T ss_pred HHHHHHHHHHHHHHHHhcccCCCcCCeEEEcCCCCEEEECcHHHHHHhccccC-HH----HHHH--HHHHHHHh------
Confidence 3445667777888999999 8 78887777 788 999999999998765 22 3332 03333222
Q ss_pred ccccCCcceeeEe---eecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhh-cccc---C
Q psy14622 312 AEDVDGEALSTLV---VGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEG-MKFD---R 384 (788)
Q Consensus 312 ~~~~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~ 384 (788)
.+-||||||+.|| +-+++.+-++.|.+|+.+.+|++.|.+.|++ .|++++. ++.+ +
T Consensus 86 ~~~GDGTTt~vvLa~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~-----------------~L~~~~~~~~~~~~~~ 148 (531)
T TIGR02346 86 NEIGDGTNLVIVLAGELLDKAEELIRMGLHPSEIIKGYEQALKKAME-----------------VLEELVVWEVEDVRNK 148 (531)
T ss_pred hhhCCChhhHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH-----------------HHHHhccccCCCCCCH
Confidence 1229999999999 8999999999999999999999999999998 8888885 6644 5
Q ss_pred CCCCch--hhhhh---hhhHHHHHHHHHHhhhccCCCC--cEEEecCCccceeEEEEEe-----eEeccccccccccccc
Q psy14622 385 GYISPY--FIIEL---KLVLEYYIQTYIYLCLKVGKEG--VITVKDGKTLTDELEVIEG-----MKFDRGYISPYFINTA 452 (788)
Q Consensus 385 ~~~~~~--~~~~~---~~~~~~~~~~~~~~~~kvG~dG--vItveeg~~~~~~lev~eG-----~~fd~GylSpyfvt~~ 452 (788)
+.+.++ ++++. +. .+.|++..++++.++|.+| .+.++.= .+.-..| .+|-.|+.=++- .
T Consensus 149 ~~l~~i~~tsl~sK~~~~-~~~ls~l~~~Ai~~v~~~~~~~~~~~~I-----~i~ki~G~s~~ds~li~Gi~~~~~---~ 219 (531)
T TIGR02346 149 KELIKALKASISSKQYGN-EDFLAQLVAKACSTVMPKNPENFNVDNI-----RVSKIMGGSISNSEVLKGMVFNRE---A 219 (531)
T ss_pred HHHHHHHHHHhccccCch-HHHHHHHHHHHHHHHhhcCCCcCChhHe-----eEEEecCCChhhceeEeeeEEecc---C
Confidence 667777 44554 34 6778999999999999876 5543311 1111223 345556652211 1
Q ss_pred CCceeEeccceeeccccccc
Q psy14622 453 KGAKVEFQDALVLLSESKIS 472 (788)
Q Consensus 453 e~~~v~l~~p~ILitD~kI~ 472 (788)
..|.-.++||.|++++.++.
T Consensus 220 ~~~~k~i~n~kI~l~~~~l~ 239 (531)
T TIGR02346 220 EGSVKRVKNAKVAVFSCPLD 239 (531)
T ss_pred CCCceeccCCCEEEEecCcC
Confidence 12223578899888877653
No 64
>cd03343 cpn60 cpn60 chaperonin family. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. Archaeal cpn60 (thermosome), together with TF55 from thermophilic bacteria and the eukaryotic cytosol chaperonin (CTT), belong to the type II group of chaperonins. Cpn60 consists of two stacked octameric rings, which are composed of one or two different subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis.
Probab=98.72 E-value=5.5e-10 Score=128.88 Aligned_cols=154 Identities=10% Similarity=0.061 Sum_probs=132.3
Q ss_pred cccCCCccccccccceeecccccccC--c---cccccccc-ccc-cccceeecchhhhhhhhhhhhhhhhhhHHHhhhcc
Q psy14622 232 DVRFGPEVRGLMLQGVDILADAMYRL--P---RVLRSQNL-TPL-LRAKVEFQDALVLLSESKISSIQSIIPALELANSK 304 (788)
Q Consensus 232 ~~~~~~~~r~~~L~~~~i~~~~~~~t--p---~v~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (788)
+..+|.+++..++..+..+++.+..| | ++++..++ .|. ||||+++++++.+... ++.|+
T Consensus 9 ~~~~~~~~~~~n~~~~~~i~~~v~tslGP~G~~k~i~~~~g~~~iTnDG~tIlk~l~~~hP-----~a~ll--------- 74 (517)
T cd03343 9 QRTSGRDAQRMNIAAAKAVAEAVRTTLGPKGMDKMLVDSLGDVTITNDGATILKEMDIEHP-----AAKML--------- 74 (517)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHhCCCCCCCCCceeEcCCCCEEEEccHHHHHHHccCcCH-----HHHHH---------
Confidence 35667778889999999999999999 9 89999999 888 9999999999987653 34442
Q ss_pred CCcceeeccc--cCCcceeeEe---eecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhh
Q psy14622 305 RKPLVILAED--VDGEALSTLV---VGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEG 379 (788)
Q Consensus 305 ~~~~~~~~~~--~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (788)
.+++.+-++ ||||||+++| +.+++.+-++.|.+|+.+.+|+++|...|++ .|++++.
T Consensus 75 -~~~a~~q~~~~GDGTtt~viLa~~ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~-----------------~L~~~s~ 136 (517)
T cd03343 75 -VEVAKTQDEEVGDGTTTAVVLAGELLEKAEDLLDQNIHPTVIIEGYRLAAEKALE-----------------LLDEIAI 136 (517)
T ss_pred -HHHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHH-----------------HHHHhhc
Confidence 333333334 9999999999 8899999999999999999999999999999 8999999
Q ss_pred ccc--cCCCCCchhhhhhhhh-----HHHHHHHHHHhhhccCCCC
Q psy14622 380 MKF--DRGYISPYFIIELKLV-----LEYYIQTYIYLCLKVGKEG 417 (788)
Q Consensus 380 ~~~--~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~kvG~dG 417 (788)
++. +++.+.+++.++.+++ .+.+++.+++++.++|.+|
T Consensus 137 ~v~~~~~~~l~~va~ts~~sk~~~~~~~~l~~l~~~A~~~v~~~~ 181 (517)
T cd03343 137 KVDPDDKDTLRKIAKTSLTGKGAEAAKDKLADLVVDAVLQVAEKR 181 (517)
T ss_pred ccCCCCHHHHHHHHHHhhcccchhhHHHHHHHHHHHHHHHhhhcc
Confidence 986 6788999999999986 5788999999999998764
No 65
>cd03342 TCP1_zeta TCP-1 (CTT or eukaryotic type II) chaperonin family, zeta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=98.71 E-value=8.4e-10 Score=126.61 Aligned_cols=151 Identities=15% Similarity=0.057 Sum_probs=127.7
Q ss_pred CCCccccccccceeecccccccC--c---cccccccc-ccc-cccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCc
Q psy14622 235 FGPEVRGLMLQGVDILADAMYRL--P---RVLRSQNL-TPL-LRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKP 307 (788)
Q Consensus 235 ~~~~~r~~~L~~~~i~~~~~~~t--p---~v~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (788)
-|.++...++..+..+++.+..| | ++++..++ .|. ||||+++++++.+.. |..+.+.+
T Consensus 9 ~~~~~~~~ni~a~~~l~~~vkttlGP~G~~kmi~~~~g~~~iTnDG~tIlk~i~~~h-P~a~l~~~-------------- 73 (484)
T cd03342 9 RRGQALAVNISAAKGLQDVLKTNLGPKGTLKMLVSGAGDIKLTKDGNVLLSEMQIQH-PTASMIAR-------------- 73 (484)
T ss_pred cHHHHHHHHHHHHHHHHHHHhcCcCCCCCceEEECCCCCEEEeccHHHHHHhccCcC-HHHHHHHH--------------
Confidence 34456667777888899999999 9 78888888 888 999999999997765 44444432
Q ss_pred ceeeccc--cCCcceeeEe---eecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccc
Q psy14622 308 LVILAED--VDGEALSTLV---VGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKF 382 (788)
Q Consensus 308 ~~~~~~~--~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (788)
++.+-++ ||||||+++| +.++|.+.++.|.+|+.+.+|+++|.+.|++ .|++++.++.
T Consensus 74 ~a~~qd~~~GDGTTt~vvLa~~Ll~~a~~li~~gi~P~~I~~g~~~a~~~~~~-----------------~L~~~s~~v~ 136 (484)
T cd03342 74 AATAQDDITGDGTTSNVLLIGELLKQAERYIQEGVHPRIITEGFELAKNKALK-----------------FLESFKVPVE 136 (484)
T ss_pred HHHHhhhHhCCChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH-----------------HHHHhcccCC
Confidence 2333333 9999999999 8999999999999999999999999999999 9999999996
Q ss_pred ---cCCCCCchhhhhhhhh-----HHHHHHHHHHhhhccCCCC
Q psy14622 383 ---DRGYISPYFIIELKLV-----LEYYIQTYIYLCLKVGKEG 417 (788)
Q Consensus 383 ---~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~kvG~dG 417 (788)
+++.+.+++.+|+++. .+.|.+..++++..+|++|
T Consensus 137 ~~~~~~~l~~va~ts~~sk~~~~~~~~l~~l~~~A~~~v~~~~ 179 (484)
T cd03342 137 IDTDRELLLSVARTSLRTKLHADLADQLTEIVVDAVLAIYKPD 179 (484)
T ss_pred CCCCHHHHHHHHHHHhCcccchhHHHHHHHHHHHHHHHHhhcC
Confidence 7889999999999986 6788999999999999876
No 66
>TIGR02340 chap_CCT_alpha T-complex protein 1, alpha subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT alpha chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=98.55 E-value=4.2e-09 Score=122.34 Aligned_cols=157 Identities=13% Similarity=0.083 Sum_probs=127.4
Q ss_pred cccCCCccccccccceeecccccccC--c---cccccccc-ccc-cccceeecchhhhhhhhhhhhhhhhhhHHHhhhcc
Q psy14622 232 DVRFGPEVRGLMLQGVDILADAMYRL--P---RVLRSQNL-TPL-LRAKVEFQDALVLLSESKISSIQSIIPALELANSK 304 (788)
Q Consensus 232 ~~~~~~~~r~~~L~~~~i~~~~~~~t--p---~v~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (788)
+-..|++++..++..+..+++.+..| | ++++..++ .|. ||||++++|++++.. |. +.|+
T Consensus 6 ~~~~~~~~~~~ni~~~~~l~~~vkttlGP~G~~k~I~~~~g~~~iTnDG~tIlk~i~~~h-P~----akll--------- 71 (536)
T TIGR02340 6 ERTSGQDVRTQNVTAAMAIANIVKTSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEH-PA----AKIL--------- 71 (536)
T ss_pred ceecHHHHHHHHHHHHHHHHHHHhcCcCCCcCceEEEcCCCCEEEeccHHHHHHHhcccC-hH----HHHH---------
Confidence 34455678889999999999999999 9 89999999 888 999999999998765 22 2332
Q ss_pred CCcceeeccc--cCCcceeeEe---eecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhh-h
Q psy14622 305 RKPLVILAED--VDGEALSTLV---VGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVI-E 378 (788)
Q Consensus 305 ~~~~~~~~~~--~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 378 (788)
.+++..-++ ||||||+++| +-+++.+-++.|.+|+.+.+|++.|.+.|++ .|+++ +
T Consensus 72 -~~~a~~qd~~~GDGTTt~viLa~~Ll~~a~~li~~gi~p~~I~~g~~~a~~~~~~-----------------~L~~~~~ 133 (536)
T TIGR02340 72 -VELAQLQDREVGDGTTSVVIIAAELLKRADELIKRKVHPTSIISGYRLACKEAVK-----------------YIKENLS 133 (536)
T ss_pred -HHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH-----------------HHHHhhc
Confidence 222333333 9999999999 8999999999999999999999999999999 88764 7
Q ss_pred hccc--cCCCCCchhhhhhh-----hhHHHHHHHHHHhhhccC---CCCcEE
Q psy14622 379 GMKF--DRGYISPYFIIELK-----LVLEYYIQTYIYLCLKVG---KEGVIT 420 (788)
Q Consensus 379 ~~~~--~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~kvG---~dGvIt 420 (788)
.++. +.+++.+++.++.+ ...+.+++..++++.++| .+|.++
T Consensus 134 ~~~~~~~~~~l~~va~tsl~sK~~~~~~~~ls~l~~~A~~~v~~~~~~g~~~ 185 (536)
T TIGR02340 134 VSVDELGREALINVAKTSMSSKIIGLDSDFFSNIVVDAVLAVKMTNENGETK 185 (536)
T ss_pred cCCCcccHHHHHHHHHHHhccccchhhHHHHHHHHHHHHHHHhcccccCccc
Confidence 7776 77889999998877 235678999999999997 456543
No 67
>TIGR02339 thermosome_arch thermosome, various subunits, archaeal. Thermosome is the name given to the archaeal rather than eukaryotic form of the group II chaperonin (counterpart to the group I chaperonin, GroEL/GroES, in bacterial), a torroidal, ATP-dependent molecular chaperone that assists in the folding or refolding of nascent or denatured proteins. Various homologous subunits, one to five per archaeal genome, may be designated alpha, beta, etc., but phylogenetic analysis does not show distinct alpha subunit and beta subunit lineages traceable to ancient paralogs.
Probab=98.52 E-value=5.9e-09 Score=120.59 Aligned_cols=157 Identities=10% Similarity=0.056 Sum_probs=131.4
Q ss_pred cccCCCccccccccceeecccccccC--c---cccccccc-ccc-cccceeecchhhhhhhhhhhhhhhhhhHHHhhhcc
Q psy14622 232 DVRFGPEVRGLMLQGVDILADAMYRL--P---RVLRSQNL-TPL-LRAKVEFQDALVLLSESKISSIQSIIPALELANSK 304 (788)
Q Consensus 232 ~~~~~~~~r~~~L~~~~i~~~~~~~t--p---~v~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (788)
+...|.+++..+++.+..+++.+..| | ++++..++ .|. ||||++++|++.+... ++.++
T Consensus 10 ~~~~~~~~~~~ni~~~~~i~~~v~tslGP~G~~k~i~~~~g~~~iTnDG~tIlk~l~~~hP-----~a~ll--------- 75 (519)
T TIGR02339 10 QRTKGRDAQRNNIAAAKAVAEAVKSTLGPRGMDKMLVDSLGDVTITNDGATILKEMDIEHP-----AAKML--------- 75 (519)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHhCCCCCCCCCeeeECCCCCEEEEccHHHHHHhccCCCH-----HHHHH---------
Confidence 45667778889999999999999999 9 88888888 888 9999999999987652 33432
Q ss_pred CCcceeeccc--cCCcceeeEe---eecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhh
Q psy14622 305 RKPLVILAED--VDGEALSTLV---VGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEG 379 (788)
Q Consensus 305 ~~~~~~~~~~--~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (788)
.+++..-++ ||||||+++| +.+++.+-++.|.+|+.+.+|+++|.+.|++ .|++++.
T Consensus 76 -~~~a~~qd~~~GDGTtt~viL~~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~-----------------~L~~~s~ 137 (519)
T TIGR02339 76 -VEVAKTQDAEVGDGTTTAVVLAGELLEKAEDLLEQGIHPTVIIEGYRKAAEKALE-----------------IIDEIAT 137 (519)
T ss_pred -HHHHHHHHHHhCCCcccHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH-----------------HHHHhcc
Confidence 222333333 9999999999 8999999999999999999999999999999 8999998
Q ss_pred cccc--CCCCCchhhhhhhhh------HHHHHHHHHHhhhccCC---CCcEE
Q psy14622 380 MKFD--RGYISPYFIIELKLV------LEYYIQTYIYLCLKVGK---EGVIT 420 (788)
Q Consensus 380 ~~~~--~~~~~~~~~~~~~~~------~~~~~~~~~~~~~kvG~---dGvIt 420 (788)
++.+ ++.+.+++.++.+++ .+.|.+..++++.++|. +|.+.
T Consensus 138 ~v~~~~~~~L~~ia~tsl~sk~~~~~~~~~ls~l~~~A~~~v~~~~~~g~~~ 189 (519)
T TIGR02339 138 KISPEDRDLLKKVAETSLTGKASAEVTKDKLANLVVEAVKQVAEKRGDGKYY 189 (519)
T ss_pred ccCcccHHHHHHHHHhhhccccccchhHHHHHHHHHHHHHHHhhhccCCCcc
Confidence 8854 578899999998765 47789999999999995 67654
No 68
>cd03339 TCP1_epsilon TCP-1 (CTT or eukaryotic type II) chaperonin family, epsilon subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=98.40 E-value=1.1e-08 Score=118.64 Aligned_cols=208 Identities=13% Similarity=0.086 Sum_probs=157.0
Q ss_pred cccCCCccccccccceeecccccccC--c---cccccccc-ccc-cccceeecchhhhhhhhhhhhhhhhhhHHHhhhcc
Q psy14622 232 DVRFGPEVRGLMLQGVDILADAMYRL--P---RVLRSQNL-TPL-LRAKVEFQDALVLLSESKISSIQSIIPALELANSK 304 (788)
Q Consensus 232 ~~~~~~~~r~~~L~~~~i~~~~~~~t--p---~v~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (788)
+..+|.+++..++..+..+++.+..| | ++++..++ .|. ||||++++|++.+.. |. +.|+ .|.+.+-
T Consensus 17 ~~~~~~~~~~~ni~~~~~i~~~v~tslGP~G~~kmi~~~~G~~~iTnDG~tIlk~l~~~h-P~----akll--~~~a~~q 89 (526)
T cd03339 17 KRLKGLEAHKSHILAAKSVANILRTSLGPRGMDKILVSPDGEVTVTNDGATILEKMDVDH-QI----AKLL--VELSKSQ 89 (526)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHhCCCCCCCCcEEEECCCCCEEEeCcHHHHHHHhcccC-HH----HHHH--HHHHHhh
Confidence 46788888889999999999999999 9 88888888 888 999999999998765 22 2331 0333322
Q ss_pred CCcceeeccccCCcceeeEe---eecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhcc
Q psy14622 305 RKPLVILAEDVDGEALSTLV---VGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMK 381 (788)
Q Consensus 305 ~~~~~~~~~~~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (788)
+ .+-||||||+++| +-+++.+-++.|.+|+.+.+|+++|...|++ .|++++.++
T Consensus 90 ~------~~~GDGTtt~viLa~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~-----------------~L~~~~~~~ 146 (526)
T cd03339 90 D------DEIGDGTTGVVVLAGALLEQAEKLLDRGIHPIRIADGYEQACKIAVE-----------------HLEEIADKI 146 (526)
T ss_pred h------hhhcCChhhHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH-----------------HHHHhcccc
Confidence 2 1229999999999 8899999999999999999999999999999 888899988
Q ss_pred c----cCCCCCchhhhhhhhhHHHHHHHHHHhhhccCCCCcEEEecCCccceeEEEEEee----------Eecccccccc
Q psy14622 382 F----DRGYISPYFIIELKLVLEYYIQTYIYLCLKVGKEGVITVKDGKTLTDELEVIEGM----------KFDRGYISPY 447 (788)
Q Consensus 382 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kvG~dGvItveeg~~~~~~lev~eG~----------~fd~GylSpy 447 (788)
. +++.+.+++..+.+ ++ +...+.....+++.++++++.+++..++.++.+.=. +|-.|++=++
T Consensus 147 ~~~~~~~~~l~~ia~tsl~-sk--~~~~~~~~~s~i~v~av~~i~~~~~~~~d~~~I~i~ki~Ggs~~dS~~v~Givi~~ 223 (526)
T cd03339 147 EFSPDNKEPLIQTAMTSLG-SK--IVSRCHRQFAEIAVDAVLSVADLERKDVNFELIKVEGKVGGRLEDTKLVKGIVIDK 223 (526)
T ss_pred CCCcccHHHHHHHHHHhhc-cc--chhhHHHHHHHHHHHHHHHHhhcCCCccchHHeEEEEecCcCHHHcceeeeEEEec
Confidence 6 46778999999988 43 466777777889999999998765444333332222 4556665322
Q ss_pred cccccCCceeEeccceeecccccccc
Q psy14622 448 FINTAKGAKVEFQDALVLLSESKISS 473 (788)
Q Consensus 448 fvt~~e~~~v~l~~p~ILitD~kI~~ 473 (788)
=+ ....|.-.++||.|++.+..++.
T Consensus 224 ~~-~~~~m~~~~~n~kI~ll~~~le~ 248 (526)
T cd03339 224 DF-SHPQMPKEVKDAKIAILTCPFEP 248 (526)
T ss_pred cc-CCCCCCceecCCCEEEEEecccC
Confidence 11 12345556789999988887653
No 69
>cd03335 TCP1_alpha TCP-1 (CTT or eukaryotic type II) chaperonin family, alpha subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=98.40 E-value=1.7e-08 Score=117.03 Aligned_cols=148 Identities=12% Similarity=0.078 Sum_probs=122.6
Q ss_pred CCccccccccceeecccccccC--c---cccccccc-ccc-cccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcc
Q psy14622 236 GPEVRGLMLQGVDILADAMYRL--P---RVLRSQNL-TPL-LRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPL 308 (788)
Q Consensus 236 ~~~~r~~~L~~~~i~~~~~~~t--p---~v~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (788)
|++++..++..+..+++.+..| | ++++..++ .|. ||||+++++++.+.. |. +.|+ .++
T Consensus 6 ~~~~~~~ni~a~~~l~~~v~tslGP~G~~kmi~~~~g~~~iTnDG~tIlk~i~~~h-P~----akll----------~~~ 70 (527)
T cd03335 6 GQDVRTQNVTAAMAIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEH-PA----AKIL----------VEL 70 (527)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcCCCcCceEEEcCCCCEEEeCcHHHHHHhccccC-hH----HHHH----------HHH
Confidence 4557778888999999999999 9 88888888 888 999999999997765 32 2332 222
Q ss_pred eeeccc--cCCcceeeEe---eecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhh-hhhccc
Q psy14622 309 VILAED--VDGEALSTLV---VGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEV-IEGMKF 382 (788)
Q Consensus 309 ~~~~~~--~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 382 (788)
+..-++ ||||||+.+| +-+++.+-++.|.+|+.+.+|+++|.+.|++ .|++ ++.++.
T Consensus 71 a~~q~~~~GDGTTt~vvLa~~ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~-----------------~L~~~~~~~~~ 133 (527)
T cd03335 71 AQLQDKEVGDGTTSVVIIAAELLKRANELVKQKIHPTTIISGYRLACKEAVK-----------------YIKEHLSISVD 133 (527)
T ss_pred HHHHHHHhCCCcchHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH-----------------HHHHhhccCCC
Confidence 333333 9999999999 8999999999999999999999999999999 7875 788876
Q ss_pred --cCCCCCchhhhhhh-----hhHHHHHHHHHHhhhccCC
Q psy14622 383 --DRGYISPYFIIELK-----LVLEYYIQTYIYLCLKVGK 415 (788)
Q Consensus 383 --~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~kvG~ 415 (788)
+++.+.+++.++.+ .+.+.+.+..++++.+++.
T Consensus 134 ~~~~~~l~~ia~tsl~sK~~~~~~~~ls~l~~~A~~~v~~ 173 (527)
T cd03335 134 NLGKESLINVAKTSMSSKIIGADSDFFANMVVDAILAVKT 173 (527)
T ss_pred ccCHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHhhc
Confidence 77889999998877 6778889999999999963
No 70
>PTZ00212 T-complex protein 1 subunit beta; Provisional
Probab=98.38 E-value=1.1e-08 Score=118.76 Aligned_cols=128 Identities=13% Similarity=0.021 Sum_probs=103.2
Q ss_pred ccCCCccccccccceeecccccccC--c---ccccccc-----c-ccc-cccceeecchhhhhhhhhhhhhhhhhhHHHh
Q psy14622 233 VRFGPEVRGLMLQGVDILADAMYRL--P---RVLRSQN-----L-TPL-LRAKVEFQDALVLLSESKISSIQSIIPALEL 300 (788)
Q Consensus 233 ~~~~~~~r~~~L~~~~i~~~~~~~t--p---~v~~~~~-----~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (788)
...|.+++..++..+..+++.+..| | ++++..+ + .|. ||||++++|++.+... ++.|+
T Consensus 17 ~~~~~~a~~~ni~a~~~i~~~vkttlGP~G~~Kmi~~~~~~~~~G~~~iTnDG~TIlk~i~~~hP-----~akll----- 86 (533)
T PTZ00212 17 EEKGETARLQSFVGAIAVADLVKTTLGPKGMDKILQPMSEGPRSGNVTVTNDGATILKSVWLDNP-----AAKIL----- 86 (533)
T ss_pred cccHHHHHHHHHHHHHHHHHHHhCCCCCCccceEeecCCCcccCCCEEEeccHHHHHHhccCcCH-----HHHHH-----
Confidence 3445668889999999999999999 9 6666666 7 777 9999999999988652 44442
Q ss_pred hhccCCcceeeccc--cCCcceeeEe---eecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhh
Q psy14622 301 ANSKRKPLVILAED--VDGEALSTLV---VGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELE 375 (788)
Q Consensus 301 ~~~~~~~~~~~~~~--~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (788)
.+++..-++ ||||||+++| +-+++.+-++.|.+|+.+.+|+++|.+.|++ .|+
T Consensus 87 -----~~~a~~qd~~~GDGTTtvvvLa~~Ll~~a~~li~~gi~p~~Ii~g~~~a~~~~~~-----------------~L~ 144 (533)
T PTZ00212 87 -----VDISKTQDEEVGDGTTSVVVLAGELLREAEKLLDQKIHPQTIIEGWRMALDVARK-----------------ALE 144 (533)
T ss_pred -----HHHHHhhhhhhCCchhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH-----------------HHH
Confidence 223333333 9999999999 8899999999999999999999999999999 888
Q ss_pred hhhhcccc-----CCCCCchhh
Q psy14622 376 VIEGMKFD-----RGYISPYFI 392 (788)
Q Consensus 376 ~~~~~~~~-----~~~~~~~~~ 392 (788)
.++.++.+ ++.+.+++.
T Consensus 145 ~~s~~~~~~~~~~~~~l~~va~ 166 (533)
T PTZ00212 145 EIAFDHGSDEEKFKEDLLNIAR 166 (533)
T ss_pred HhCcCCCccchhhHHHHHHHHH
Confidence 89988865 345666664
No 71
>TIGR02347 chap_CCT_zeta T-complex protein 1, zeta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT zeta chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=98.27 E-value=6.1e-08 Score=112.66 Aligned_cols=150 Identities=13% Similarity=0.076 Sum_probs=121.5
Q ss_pred CccccccccceeecccccccC--c---cccccccc-ccc-cccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcce
Q psy14622 237 PEVRGLMLQGVDILADAMYRL--P---RVLRSQNL-TPL-LRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLV 309 (788)
Q Consensus 237 ~~~r~~~L~~~~i~~~~~~~t--p---~v~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (788)
.++...++..+..+++.+..| | ++++-.++ .|. ||||+++++++.+.. |..+.+. |. +
T Consensus 15 ~~~~~~ni~a~~~l~~~vkttlGP~G~~Kmi~~~~G~~~ITnDG~TIlk~i~i~h-P~a~ll~------~~--------a 79 (531)
T TIGR02347 15 DAALMMNINAARGLQDVLKTNLGPKGTLKMLVSGAGDIKLTKDGNVLLNEMQIQH-PTASMIA------RA--------A 79 (531)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCccceEEEcCCCCEEEeccHHHHHHhccccC-hHHHHHH------HH--------H
Confidence 334455667777788999999 8 78888888 788 999999999997765 4444443 22 2
Q ss_pred eeccc--cCCcceeeEe---eecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhc---c
Q psy14622 310 ILAED--VDGEALSTLV---VGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGM---K 381 (788)
Q Consensus 310 ~~~~~--~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 381 (788)
.+-++ ||||||+.+| +-++|.+-+++|.+|+.+.+|+++|.+.|++ .|++++.+ .
T Consensus 80 ~~qd~~~GDGTTtvvvLa~~Ll~~a~~li~~gihp~~Ii~g~~~a~~~~~~-----------------~L~~~~~~~~~~ 142 (531)
T TIGR02347 80 TAQDDITGDGTTSTVILIGELLKQAERYILEGIHPRILTEGFEIARGELLE-----------------FLDKFKIKTEDE 142 (531)
T ss_pred HHhhhhhcCcHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH-----------------HHHHhhccCCCC
Confidence 22233 9999999999 8999999999999999999999999999999 88888855 4
Q ss_pred ccCCCCCchhhhhhhh-----hHHHHHHHHHHhhhccCCCCc
Q psy14622 382 FDRGYISPYFIIELKL-----VLEYYIQTYIYLCLKVGKEGV 418 (788)
Q Consensus 382 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~kvG~dGv 418 (788)
.+++.+.+++.++.++ ..+.+++..++++.++|.+|.
T Consensus 143 ~~~~~l~~ia~tsl~sK~~~~~~~~ls~iv~~Av~~v~~~~~ 184 (531)
T TIGR02347 143 VDRELLLNVARTSLRTKLPIDLADQLTEIVVDAVLAIKKDGE 184 (531)
T ss_pred CCHHHHHHHHHHHhccccchhhHHHHHHHHHHHHHHHhhcCC
Confidence 5778899999988765 467789999999999998774
No 72
>cd03336 TCP1_beta TCP-1 (CTT or eukaryotic type II) chaperonin family, beta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=98.16 E-value=9.4e-08 Score=110.70 Aligned_cols=149 Identities=11% Similarity=0.026 Sum_probs=111.7
Q ss_pred ccCCCccccccccceeecccccccC--c---ccccccc--c-ccc-cccceeecchhhhhhhhhhhhhhhhhhHHHhhhc
Q psy14622 233 VRFGPEVRGLMLQGVDILADAMYRL--P---RVLRSQN--L-TPL-LRAKVEFQDALVLLSESKISSIQSIIPALELANS 303 (788)
Q Consensus 233 ~~~~~~~r~~~L~~~~i~~~~~~~t--p---~v~~~~~--~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (788)
..-|.+++..++..+..+++.+..| | ++++... | .|. ||||++++|++.+... ++.++ .|.|.+
T Consensus 8 ~~~~~~a~~~n~~~~~~i~~~v~tslGP~G~~Kmi~~~~~~g~~~iTnDG~tIlk~l~~~hP-----~akll--~~~a~~ 80 (517)
T cd03336 8 EEKGETARLSSFVGAIAIGDLVKTTLGPKGMDKILQSVGRSGGVTVTNDGATILKSIGVDNP-----AAKVL--VDISKV 80 (517)
T ss_pred cccHHHHHHHHHHHHHHHHHHHhcCCCCCcCceEeecCCCCCCeEEeccHHHHHHHccCcCh-----HHHHH--HHHHHH
Confidence 3445567888999999999999999 9 5666554 7 788 9999999999987652 44442 133332
Q ss_pred cCCcceeeccccCCcceeeEe---eecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhc
Q psy14622 304 KRKPLVILAEDVDGEALSTLV---VGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGM 380 (788)
Q Consensus 304 ~~~~~~~~~~~~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (788)
-+ .+-||||||+.+| +-+++.+-++.|.+|+.+.+|+++|.+.|++ .|++++.+
T Consensus 81 qd------~~~GDGTTtvvvLa~~Ll~~a~~li~~gi~p~~I~~g~~~a~~~~~~-----------------~L~~~~~~ 137 (517)
T cd03336 81 QD------DEVGDGTTSVTVLAAELLREAEKLVAQKIHPQTIIEGYRMATAAARE-----------------ALLSSAVD 137 (517)
T ss_pred HH------hHhCCChhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH-----------------HHHHhccC
Confidence 22 1229999999999 8899999999999999999999999999999 88888888
Q ss_pred ccc-----CCCCCchhh--hhhhh---hHHHHHHHHHHhhh
Q psy14622 381 KFD-----RGYISPYFI--IELKL---VLEYYIQTYIYLCL 411 (788)
Q Consensus 381 ~~~-----~~~~~~~~~--~~~~~---~~~~~~~~~~~~~~ 411 (788)
+.+ ++.+.+++. ++++. ..+.|.+...+++.
T Consensus 138 ~~~~~~~~~~~l~~ia~t~lssk~~~~~~~~l~~l~~~A~~ 178 (517)
T cd03336 138 HSSDEEAFREDLLNIARTTLSSKILTQDKEHFAELAVDAVL 178 (517)
T ss_pred cccccchhHHHHHHHHHhhccccccchhHHHHHHHHHHHHH
Confidence 742 356777876 55552 23446666666443
No 73
>TIGR02341 chap_CCT_beta T-complex protein 1, beta subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT beta chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=98.09 E-value=1.3e-07 Score=109.65 Aligned_cols=134 Identities=10% Similarity=0.030 Sum_probs=103.5
Q ss_pred cCCCccccccccceeecccccccC--c---ccccccc--c-ccc-cccceeecchhhhhhhhhhhhhhhhhhHHHhhhcc
Q psy14622 234 RFGPEVRGLMLQGVDILADAMYRL--P---RVLRSQN--L-TPL-LRAKVEFQDALVLLSESKISSIQSIIPALELANSK 304 (788)
Q Consensus 234 ~~~~~~r~~~L~~~~i~~~~~~~t--p---~v~~~~~--~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (788)
..+.+++..++..+..+++++..| | ++++-.+ + .|. ||||+++++++.+... ++.++ .|.|.+-
T Consensus 10 ~~~~~a~~~ni~a~~~i~~~vkttlGP~G~~KmI~~~~~~G~~~iTnDG~tIlk~l~i~hP-----~akll--~~~a~~q 82 (519)
T TIGR02341 10 ERGENARLSSFVGAIAIGDLVKSTLGPKGMDKILQSGSSESGIMVTNDGATILKSIGVDNP-----AAKVL--VDMSKVQ 82 (519)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhcCCCCCcCceEEeccCCCCCeEEeccHHHHHHHccCcCh-----HHHHH--HHHHHHh
Confidence 344557778888999999999999 9 4544444 5 777 9999999999987652 44442 1333322
Q ss_pred CCcceeeccccCCcceeeEe---eecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhcc
Q psy14622 305 RKPLVILAEDVDGEALSTLV---VGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMK 381 (788)
Q Consensus 305 ~~~~~~~~~~~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (788)
+ .+-||||||+.+| +-+++.+-++.|.+|+.+.+|++.|.+.|++ .|++++.++
T Consensus 83 d------~~~GDGTTtvvvLa~~Ll~~a~~li~~gihp~~Ii~g~~~a~~~~~~-----------------~L~~~~~~~ 139 (519)
T TIGR02341 83 D------DEVGDGTTSVTVLAAELLREAEKLVNQKIHPQTIISGYRRATKAAQE-----------------ALKKSSIDN 139 (519)
T ss_pred H------hhhCCchhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH-----------------HHHHhcccc
Confidence 2 1229999999999 8899999999999999999999999999999 888899888
Q ss_pred cc-----CCCCCchhhhhhhh
Q psy14622 382 FD-----RGYISPYFIIELKL 397 (788)
Q Consensus 382 ~~-----~~~~~~~~~~~~~~ 397 (788)
.+ ++.+.+++..+.++
T Consensus 140 ~~~~~~~~~~L~~ia~t~l~s 160 (519)
T TIGR02341 140 GSDKTKFRDDLLNIARTTLSS 160 (519)
T ss_pred cCcccccHHHHHHHHHHHhhh
Confidence 64 35677888777663
No 74
>TIGR02343 chap_CCT_epsi T-complex protein 1, epsilon subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT epsilon chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=98.05 E-value=1.9e-07 Score=108.67 Aligned_cols=207 Identities=14% Similarity=0.063 Sum_probs=150.2
Q ss_pred ccCCCccccccccceeecccccccC--c---cccccccc-ccc-cccceeecchhhhhhhhhhhhhhhhhhHHHhhhccC
Q psy14622 233 VRFGPEVRGLMLQGVDILADAMYRL--P---RVLRSQNL-TPL-LRAKVEFQDALVLLSESKISSIQSIIPALELANSKR 305 (788)
Q Consensus 233 ~~~~~~~r~~~L~~~~i~~~~~~~t--p---~v~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (788)
-..|.+++..++..+..+++.+..| | ++++-..+ .|. |+||++++|++.+.. |. +.|+ .|.+.+-+
T Consensus 22 ~~~~~~a~~~ni~a~~~i~~~vkttlGP~G~~KmI~~~~G~~~ITnDG~tIlk~l~~~h-P~----akll--~~~a~~qd 94 (532)
T TIGR02343 22 RLKGLEAIKSNIAAAKSVASILRTSLGPKGMDKMLQSPDGDITVTNDGATILSQMDVDN-PI----AKLM--VELSKSQD 94 (532)
T ss_pred cccHHHHHHHHHHHHHHHHHHHhCCCCCCCCeEEEEcCCCCEEEeCcHHHHHHHccCCC-HH----HHHH--HHHHHHHH
Confidence 3455667888899999999999999 9 78888888 788 999999999998765 22 2221 13333221
Q ss_pred CcceeeccccCCcceeeEe---eecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccc
Q psy14622 306 KPLVILAEDVDGEALSTLV---VGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKF 382 (788)
Q Consensus 306 ~~~~~~~~~~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (788)
.+-||||||+.+| +-+++.+-+++|.+|+.+.+|++.|.+.|++ .|++++.++.
T Consensus 95 ------~~~GDGTttvvvLa~~Ll~~a~~li~~gihp~~Ii~g~~~a~~~~~~-----------------~L~~~~~~~~ 151 (532)
T TIGR02343 95 ------DEIGDGTTGVVVLAGALLEQAEALLDKGIHPIKIAEGFEVAARVAVE-----------------HLEEISEEIS 151 (532)
T ss_pred ------HHhcCCcccHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH-----------------HHHHhccccC
Confidence 1229999999999 8899999999999999999999999999999 8888888775
Q ss_pred c----CCCCCchhhhhhhhhHHHHHHHHHHhhhccCCCCcEEEecCCccce---eEEEE--E-----eeEeccccccccc
Q psy14622 383 D----RGYISPYFIIELKLVLEYYIQTYIYLCLKVGKEGVITVKDGKTLTD---ELEVI--E-----GMKFDRGYISPYF 448 (788)
Q Consensus 383 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~kvG~dGvItveeg~~~~~---~lev~--e-----G~~fd~GylSpyf 448 (788)
+ ++.+.+++..+.++ + +...+.....+++.++++++.+++..+. .+.+. . -.+|-.|++=+.-
T Consensus 152 ~~~~~~~~l~~ia~t~l~s-K--~~~~~~~~ls~i~~~av~~i~~~~~~~~d~~~I~i~ki~Ggs~~ds~~v~Gi~i~~~ 228 (532)
T TIGR02343 152 DDNNNKEPLIQAAKTSLGS-K--IVSKCHRRFAEIAVDAVLMVADMERRDVDFDLIKVEGKVGGSLEDTKLIKGIIIDKD 228 (532)
T ss_pred cCCCCHHHHHHHHHHhhcc-c--hhhHHHHHHHHHHHHHHHhhhhcCCCcCCHHHeeEEEecCCCcccceeEeeEEEecC
Confidence 3 56788999988774 3 4667777778899999999976542221 12222 1 1245556552221
Q ss_pred ccccCCceeEeccceeecccccccc
Q psy14622 449 INTAKGAKVEFQDALVLLSESKISS 473 (788)
Q Consensus 449 vt~~e~~~v~l~~p~ILitD~kI~~ 473 (788)
+. +..|.-.++||.|++.+..++.
T Consensus 229 ~~-~~~m~~~~~n~kI~l~~~~le~ 252 (532)
T TIGR02343 229 FS-HPQMPKEVKDAKIAILTCPFEP 252 (532)
T ss_pred cC-CCCCCeeecCCcEEEEEeeccc
Confidence 11 2245556788999988887653
No 75
>TIGR02344 chap_CCT_gamma T-complex protein 1, gamma subunit. Members of this family, all eukaryotic, are part of the group II chaperonin complex called CCT (chaperonin containing TCP-1) or TRiC. The archaeal equivalent group II chaperonin is often called the thermosome. Both are somewhat related to the group I chaperonin of bacterial, GroEL/GroES. This family consists exclusively of the CCT gamma chain (part of a paralogous family) from animals, plants, fungi, and other eukaryotes.
Probab=97.97 E-value=6.1e-07 Score=104.17 Aligned_cols=152 Identities=13% Similarity=0.049 Sum_probs=116.3
Q ss_pred CCccccccccceeecccccccC--c---cccccccc-ccc-cccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcc
Q psy14622 236 GPEVRGLMLQGVDILADAMYRL--P---RVLRSQNL-TPL-LRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPL 308 (788)
Q Consensus 236 ~~~~r~~~L~~~~i~~~~~~~t--p---~v~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (788)
|.+++..+++-+..+++.+..| | ++++..++ .|. ||||+++++++.+.. |. +.|+ .|.+.+-+
T Consensus 14 ~~~~~~~ni~a~~~l~~~v~ttlGP~G~~k~i~~~~g~~~iTnDG~tIl~~l~~~h-P~----akll--~~~a~~q~--- 83 (525)
T TIGR02344 14 GRKAQLSNIQAAKAVADIIRTTLGPRAMLKMLLDPMGGIVMTNDGNAILREIDVAH-PA----AKSM--IELSRTQD--- 83 (525)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCCCCCCceEEcCCCCEEEEccHHHHHHhccCCC-HH----HHHH--HHHHHhhh---
Confidence 3334445666667788888888 8 77777788 778 999999999997765 22 3332 03332222
Q ss_pred eeeccccCCcceeeEe---eecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccc--c
Q psy14622 309 VILAEDVDGEALSTLV---VGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKF--D 383 (788)
Q Consensus 309 ~~~~~~~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 383 (788)
.+-||||||+.+| +-+++.+-++.|.+|+.+.+|+++|.+.|++ .|++++.++. +
T Consensus 84 ---~~~GDGTtt~viLa~~Ll~~a~~li~~gi~p~~I~~g~~~a~~~~~~-----------------~L~~~~~~~~~~~ 143 (525)
T TIGR02344 84 ---EEVGDGTTSVIILAGEMLSVAEPFLEQNIHPTIIIRAYKKALDDALS-----------------VLEEISIPVDVND 143 (525)
T ss_pred ---hhccCCcchhHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH-----------------HHHHhccccCCCC
Confidence 1229999999999 8899999999999999999999999999999 8888888875 4
Q ss_pred CCCCCchh--hhhhhh---hHHHHHHHHHHhhhccCCCC
Q psy14622 384 RGYISPYF--IIELKL---VLEYYIQTYIYLCLKVGKEG 417 (788)
Q Consensus 384 ~~~~~~~~--~~~~~~---~~~~~~~~~~~~~~kvG~dG 417 (788)
++.+.+++ +++.+. ..+.+.+...++++.+++++
T Consensus 144 ~~~l~~i~~t~l~sk~~~~~~~~ls~l~~~Ai~~v~~~~ 182 (525)
T TIGR02344 144 DAAMLKLIQSCIGTKFVSRWSDLMCDLALDAVRTVKRDL 182 (525)
T ss_pred HHHHHHHHHHhhccccchhHHHHHHHHHHHHHHHhhccc
Confidence 45577777 555554 35778999999999999875
No 76
>cd03341 TCP1_theta TCP-1 (CTT or eukaryotic type II) chaperonin family, theta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=97.82 E-value=1.6e-06 Score=99.53 Aligned_cols=147 Identities=14% Similarity=0.093 Sum_probs=110.2
Q ss_pred ccccceeecccccccC--c---cccccccc-ccc-cccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeeccc
Q psy14622 242 LMLQGVDILADAMYRL--P---RVLRSQNL-TPL-LRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAED 314 (788)
Q Consensus 242 ~~L~~~~i~~~~~~~t--p---~v~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (788)
.++..+..+++.+..| | ++++..++ .|. ||||+++++++.+.. |. +.++ .+++..-++
T Consensus 12 ~ni~a~~~l~~~v~ttlGP~G~~kmi~~~~g~~~iTnDG~tIlk~l~~~h-P~----a~ll----------~~~a~~~~~ 76 (472)
T cd03341 12 RNIEACKELSQITRTSYGPNGMNKMVINHLEKLFVTSDAATILRELEVQH-PA----AKLL----------VMASQMQEE 76 (472)
T ss_pred HHHHHHHHHHHHHhcCcCCCCCceEEEcCCCCEEEeCcHHHHHHhccccC-HH----HHHH----------HHHHHHHhh
Confidence 4456666778888888 8 78888888 888 999999999997765 22 3332 222332333
Q ss_pred --cCCcceeeEe---eecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhc-cccCCCCC
Q psy14622 315 --VDGEALSTLV---VGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGM-KFDRGYIS 388 (788)
Q Consensus 315 --~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 388 (788)
||||||+++| +-+++.+-++.|.+|+.+.+|++.|.+.|++ .|++++.+ +.+.++..
T Consensus 77 ~~GDGTTt~vvL~~~Ll~~~~~li~~gi~p~~Ii~g~~~a~~~~~~-----------------~L~~~~~~~~~~~~~~~ 139 (472)
T cd03341 77 EIGDGTNLVVVLAGELLEKAEELLRMGLHPSEIIEGYEKALKKALE-----------------ILEELVVYKIEDLRNKE 139 (472)
T ss_pred hhCCChhhHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH-----------------HHHHhhccccCCccCHH
Confidence 9999999999 8999999999999999999999999999998 78888755 44433333
Q ss_pred chhh--------hhhhhhHHHHHHHHHHhhhccCCC--CcEEE
Q psy14622 389 PYFI--------IELKLVLEYYIQTYIYLCLKVGKE--GVITV 421 (788)
Q Consensus 389 ~~~~--------~~~~~~~~~~~~~~~~~~~kvG~d--GvItv 421 (788)
.++. ...+ ..+.+.+..++++.++|++ |.+.+
T Consensus 140 ~l~~i~~t~l~sk~~~-~~~~l~~l~~~a~~~~~~~~~~~~~~ 181 (472)
T cd03341 140 EVSKALKTAIASKQYG-NEDFLSPLVAEACISVLPENIGNFNV 181 (472)
T ss_pred HHHHHHHHHhcccccc-hHHHHHHHHHHHHHHHhhccCCcCCh
Confidence 3333 2223 4678899999999999987 55543
No 77
>cd03337 TCP1_gamma TCP-1 (CTT or eukaryotic type II) chaperonin family, gamma subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins (GroEL), each ring of the eukaryotic cytosolic chaperonin (CTT) consists of eight different, but homologous subunits. Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. The best studied in vivo substrates of CTT are actin and tubulin.
Probab=97.82 E-value=8.2e-07 Score=102.09 Aligned_cols=150 Identities=13% Similarity=0.026 Sum_probs=115.7
Q ss_pred CccccccccceeecccccccC--c---cccccccc-ccc-cccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcce
Q psy14622 237 PEVRGLMLQGVDILADAMYRL--P---RVLRSQNL-TPL-LRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLV 309 (788)
Q Consensus 237 ~~~r~~~L~~~~i~~~~~~~t--p---~v~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (788)
.++...++..+..+++.+..| | ++++-.++ .|. ||||++++|++.+... ++.++. |.+.+-+
T Consensus 15 ~~~~~~ni~a~~~l~~~~~tslGP~G~~kmi~~~~g~~~iTnDG~tIlk~l~~~hP-----~a~ll~--~~a~~q~---- 83 (480)
T cd03337 15 RKAQLGNIQAAKTVADVIRTCLGPRAMLKMLLDPMGGIVLTNDGNAILREIDVAHP-----AAKSMI--ELSRTQD---- 83 (480)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCCcCceEeEcCCCCEEEeccHHHHHHhccccCh-----HHHHHH--HHHHhHH----
Confidence 334455666677788888888 8 66676677 777 9999999999977652 444421 3322222
Q ss_pred eeccccCCcceeeEe---eecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccc--cC
Q psy14622 310 ILAEDVDGEALSTLV---VGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKF--DR 384 (788)
Q Consensus 310 ~~~~~~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 384 (788)
.+-||||||+.+| +-+++.+-++.|.+|..+-+|+++|.+.|++ .|++++.++. ++
T Consensus 84 --~~~GDGTtt~vvL~~~Ll~~a~~li~~gi~p~~I~~g~~~a~~~~~~-----------------~L~~~~~~~~~~~~ 144 (480)
T cd03337 84 --EEVGDGTTSVIILAGEILAVAEPFLERGIHPTVIIKAYRKALEDALK-----------------ILEEISIPVDVNDR 144 (480)
T ss_pred --HHhCCCcchhHhhHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHH-----------------HHHHhccccccCCH
Confidence 1229999999999 8889999999999999999999999999998 8888888886 67
Q ss_pred CCCCchhhhhhhh-----hHHHHHHHHHHhhhccCCC
Q psy14622 385 GYISPYFIIELKL-----VLEYYIQTYIYLCLKVGKE 416 (788)
Q Consensus 385 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~kvG~d 416 (788)
+.+.+++..+.++ ..+.+.+...+++..++++
T Consensus 145 ~~l~~i~~t~l~sK~~~~~~~~ls~lv~~Ai~~v~~~ 181 (480)
T cd03337 145 AQMLKIIKSCIGTKFVSRWSDLMCNLALDAVKTVAVE 181 (480)
T ss_pred HHHHHHHHHHhccCcchhHHHHHHHHHHHHHHhhccc
Confidence 7788888877553 3567788999999999875
No 78
>PF00118 Cpn60_TCP1: TCP-1/cpn60 chaperonin family Chaperonins cpn60 signature Chaperonins TCP-1 signatures 60 kd chaperonin signature; InterPro: IPR002423 Partially folded polypeptide chains, either newly made by ribosomes or emerging from mature proteins unfolded by stress, run the risk of aggregating with one another to the detriment of the organism. Folding of newly synthesised polypeptides in the crowded cellular environment requires the assistance of molecular chaperone proteins, such as the large bacterial chaperonins GroEL and GroES. GroEL and GroES prevent aggregation by encapsulating individual chains within the so-called 'Anfinsen cage' provided by the GroEL-GroES complex, where they can fold in isolation from one another []. GroEL consists of two heptameric rings of identical ATPase subunits stacked back to back, containing a cage in each ring. Each subunit consists of three domains. The equatorial domain contains the nucleotide binding site and is connected by a flexible intermediate domain with the apical domain. The latter presents several hydrophobic amino-acid side chains at the top of the ring, orientated towards the cavity of the cage. These side chains are involved in binding either a partially folded polypeptide chain or a single molecule of GroES. The assembly of proteins has been thought to be the sole result of properties inherent in the primary sequence of polypeptides themselves. In some cases, however, structural information from other protein molecules is required for correct folding and subsequent assembly into oligomers []. These 'helper' molecules are referred to as molecular chaperones, a subfamily of which are the chaperonins [], which include 10 kDa and 60 kDa proteins. These are found in abundance in prokaryotes, chloroplasts and mitochondria. They are required for normal cell growth (as demonstrated by the fact that no temperature sensitive mutants for the chaperonin genes can be found in the temperature range 20 to 43 degrees centigrade []), and are stress-induced, acting to stabilise or protect disassembled polypeptides under heat-shock conditions []. The 10 kDa chaperonin (cpn10 - or groES in bacteria) exists as a ring-shaped oligomer of between 6 to 8 identical subunits, whereas the 60 kDa chaperonin (cpn60 - or groEL in bacteria) forms a structure comprising 2 stacked rings, each ring containing 7 identical subunits []. These ring structures assemble by self-stimulation in the presence of Mg2+-ATP. The cpn10 and cpn60 oligomers also require Mg2+-ATP in order to interact to form a functional complex, although the mechanism of this interaction is as yet unknown []. This chaperonin complex is essential for the correct folding and assembly of polypeptides into oligomeric structures, of which the chaperonins themselves are not a part []. The binding of cpn10 to cpn60 inhibits the weak ATPase activity of cpn60. The 60 kDa form of chaperonin is the immunodominant antigen of patients with Legionnaire's disease [], and is thought to play a role in the protection of the Legionella bacteria from oxygen radicals within macrophages. This hypothesis is based on the finding that the cpn60 gene is upregulated in response to hydrogen peroxide, a source of oxygen radicals. Cpn60 has also been found to display strong antigenicity in many bacterial species [], and has the potential for inducing immune protection against unrelated bacterial infections. The RuBisCO subunit binding protein (which has been implicated in the assembly of RuBisCO) and cpn60 have been found to be evolutionary homologues, the RuBisCO subunit binding protein having the C-terminal Gly-Gly-Met repeat found in all bacterial cpn60 sequences. Although the precise function of this repeat is unknown, it is thought to be important as it is also found in 70 kDa heat-shock proteins []. The crystal structure of Escherichia coli GroEL has been resolved to 2.8A []. The TCP-1 family of proteins act as molecular chaperones for tubulin, actin and probably some other proteins. They are weakly, but significantly, related to the cpn60/groEL chaperonin family. ; GO: 0005524 ATP binding, 0044267 cellular protein metabolic process; PDB: 3IZH_B 3IZI_I 3LOS_I 3IYF_H 3KFK_C 3KFE_E 3RUV_C 3IZK_L 3J02_B 3RUQ_A ....
Probab=97.27 E-value=2.6e-05 Score=88.77 Aligned_cols=135 Identities=13% Similarity=0.082 Sum_probs=101.7
Q ss_pred ccccccC--c---cccccccc-ccc-cccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeeccc-cCCcceee
Q psy14622 251 ADAMYRL--P---RVLRSQNL-TPL-LRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAED-VDGEALST 322 (788)
Q Consensus 251 ~~~~~~t--p---~v~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~~~~ 322 (788)
++.+..| | ++++-... .|. |+||.++.+++.... |. +.|+. +.+ -++... ||||||+.
T Consensus 2 ~~~v~sslGP~G~~kli~~~~g~~~iTndg~tIl~~l~~~~-P~----~~ll~--~~~-------~~~~~~~GDGtts~v 67 (485)
T PF00118_consen 2 ADIVKSSLGPKGRDKLIVNDSGKIIITNDGATILKSLKINH-PI----AKLLV--EAS-------KSQDEEVGDGTTSVV 67 (485)
T ss_dssp HHHHGCCSSTTS-EEEEEESSSSEEEESSHHHHHHHSTBSS-HH----HHHHH--HHH-------HHHHHHTSSHHHHHH
T ss_pred hhhcccCcCCCCCeEEEEcCCCCeEEEechhHHHHHhhhcc-ch----hhhHH--HhH-------HHHHhhhccccceee
Confidence 3445555 6 66666677 788 999999999987743 33 33320 111 122222 99999999
Q ss_pred Ee---eecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccccC-CCCCchhhhhhhhh
Q psy14622 323 LV---VGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDR-GYISPYFIIELKLV 398 (788)
Q Consensus 323 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 398 (788)
+| +.+++.+-+++|.+|..+.+|++.|...|++ +|.+++.++.+. ..+.+++..+.+++
T Consensus 68 lL~~~ll~~~~~li~~gi~p~~I~~~~~~~~~~~~~-----------------~l~~~s~~~~~~~~~l~~i~~t~l~~k 130 (485)
T PF00118_consen 68 LLACELLRNALKLIKKGIHPQEIIRGLQEALKIILE-----------------YLEKISIPINNDDESLLNIAKTSLNSK 130 (485)
T ss_dssp HHHHHHHHHHHHHHHTTS-HHHHHHHHHHHHHHHHH-----------------HHHHHSEESTSTSHHHHHHHHHHHTTS
T ss_pred ecccchhhhhhhhhhccccccchhhhhhhhhhhhhh-----------------hhhhhhccccccchhhhhhhccccccc
Confidence 99 8899999999999999999999999999999 899999999887 88889998888876
Q ss_pred -----HHHHHHHHHHhhhccCCC
Q psy14622 399 -----LEYYIQTYIYLCLKVGKE 416 (788)
Q Consensus 399 -----~~~~~~~~~~~~~kvG~d 416 (788)
.+.+.+.+.+++..+..+
T Consensus 131 ~~~~~~~~l~~li~~a~~~~~~~ 153 (485)
T PF00118_consen 131 ISSSWSDHLSKLIVDAIKSIKSN 153 (485)
T ss_dssp CGGGCHHHHHHHHHHHHHHHTTT
T ss_pred ccccchhhhhhhHHHHHHhhccc
Confidence 355677888877555444
No 79
>cd03333 chaperonin_like chaperonin_like superfamily. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings, each composed of 7-9 subunits. There are 2 main chaperonin groups. The symmetry of type I is seven-fold and they are found in eubacteria (GroEL) and in organelles of eubacterial descent (hsp60 and RBP). The symmetry of type II is eight- or nine-fold and they are found in archea (thermosome), thermophilic bacteria (TF55) and in the eukaryotic cytosol (CTT). Their common function is to sequester nonnative proteins inside their central cavity and promote folding by using energy derived from ATP hydrolysis. This superfamily also contains related domains from Fab1-like phosphatidylinositol 3-phosphate (PtdIns3P) 5-kinases that only contain the intermediate and apical domains.
Probab=96.30 E-value=0.0028 Score=64.91 Aligned_cols=92 Identities=30% Similarity=0.360 Sum_probs=68.4
Q ss_pred HHHHHHHHhccCC-----chHHhhHHHHHHHHhhhc----------------------------------------cccc
Q psy14622 127 EEIAQVATISANG-----DKAVGELISDAMKRVSAK----------------------------------------VEFQ 161 (788)
Q Consensus 127 eeL~~VA~tSan~-----d~~Ig~LIadAv~kV~~~----------------------------------------~e~~ 161 (788)
+.+.++|++|+++ ++.+++++++|+..+++. ..++
T Consensus 2 ~~l~~ia~ts~~sk~~~~~~~l~~l~~~Av~~v~~~~~~~~~~~I~i~~~~gg~~~ds~li~Gv~~~~~~~~~~m~~~~~ 81 (209)
T cd03333 2 ELLLQVATTSLNSKLSSWDDFLGKLVVDAVLKVGPDNRMDDLGVIKVEKIPGGSLEDSELVVGVVFDKGYASPYMPKRLE 81 (209)
T ss_pred hHHHHHHHHHhccchhhHHHHHHHHHHHHHHHhhccCCCCchHHEEEEEecCcChhhceeEeeEEEeccccCCCCCeEcC
Confidence 4689999999994 578999999999988641 2334
Q ss_pred cceeeeccccchhhhhhhHHHHHHhhcCCCeEEEeec-cchhhHHHHHhhcchhhhhcccccccccccccccccCCCccc
Q psy14622 162 DALVLLSESKISSIQSIIPALELANSKRKPLVILAED-VDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRFGPEVR 240 (788)
Q Consensus 162 d~~ILite~ki~~iq~il~~l~~~~~~~~PlvIia~~-id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~~~~~~~r 240 (788)
||.|++++.+++. ||+++. ||+.+++.|..+++..+.+ .+
T Consensus 82 n~~Ill~~~~le~------------------vii~~~~I~~~al~~l~~~~I~~v~~---------------------~~ 122 (209)
T cd03333 82 NAKILLLDCPLEY------------------VVIAEKGIDDLALHYLAKAGIMAVRR---------------------VK 122 (209)
T ss_pred CCcEEEEeCCeeE------------------EEEecCcccHHHHHHHHHCCCEEEEe---------------------CC
Confidence 4455555444433 555555 9999999999988888874 45
Q ss_pred cccccceeecccccccC
Q psy14622 241 GLMLQGVDILADAMYRL 257 (788)
Q Consensus 241 ~~~L~~~~i~~~~~~~t 257 (788)
+..|+++..+++|..++
T Consensus 123 ~~~l~~ia~~tga~ii~ 139 (209)
T cd03333 123 KEDLERIARATGATIVS 139 (209)
T ss_pred HHHHHHHHHHHCCEEec
Confidence 57788888888887776
No 80
>KOG0363|consensus
Probab=94.15 E-value=0.011 Score=65.46 Aligned_cols=190 Identities=14% Similarity=0.172 Sum_probs=113.6
Q ss_pred ccceeecccccccC--c----cccccccc--ccc-cccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeeccc
Q psy14622 244 LQGVDILADAMYRL--P----RVLRSQNL--TPL-LRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAED 314 (788)
Q Consensus 244 L~~~~i~~~~~~~t--p----~v~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (788)
+-+--.+-|-++-| | ..|.|..- +-+ ||||-++.|+|-+-.. . |.+. .--+--|.|.
T Consensus 24 fvGaiaigDlvKsTLGPKGMdKiL~s~~~~~~v~VTNDGAtILksi~vDnp-a----AkvL---------v~~S~vQD~E 89 (527)
T KOG0363|consen 24 FVGAIAIGDLVKSTLGPKGMDKILQSTGRAGTVMVTNDGATILKSIGVDNP-A----AKVL---------VDISKVQDDE 89 (527)
T ss_pred HHHHHHHHHHHHhccCcchHHHHHhccCCCCceEEecchHHHHHhcCCCCc-h----hhhe---------eccccccccc
Confidence 33334445566667 7 67777775 455 9999999999766441 1 1110 1111234555
Q ss_pred -cCCcceeeEe---eecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeecc-CCcchhhhhhhhhccccCCCCCc
Q psy14622 315 -VDGEALSTLV---VGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKD-GKTLTDELEVIEGMKFDRGYISP 389 (788)
Q Consensus 315 -~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 389 (788)
|||||+-|+| .-+|.=+-|+.-..|.-|.+|...|...|++.=...+|.-.. .... |+++.+
T Consensus 90 vGDGTTSV~vlaaeLlreAeklv~~kiHPq~Ii~GyR~A~~~a~eaL~~~s~dns~~~~kf-------------r~DLl~ 156 (527)
T KOG0363|consen 90 VGDGTTSVTVLAAELLREAEKLVNQKIHPQTIISGYRMATAAALEALTKSSIDNSSDKEKF-------------REDLLK 156 (527)
T ss_pred cCCCceehHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHhhhhccCchHHH-------------HHHHHH
Confidence 9999999999 889999999999999999999999998888722222222211 1111 344444
Q ss_pred hhhhh-----hhhhHHHHHHHHHHhhhccCCCCcE---E--EecCCccceeEEEEEeeEeccccccccc--ccccCCcee
Q psy14622 390 YFIIE-----LKLVLEYYIQTYIYLCLKVGKEGVI---T--VKDGKTLTDELEVIEGMKFDRGYISPYF--INTAKGAKV 457 (788)
Q Consensus 390 ~~~~~-----~~~~~~~~~~~~~~~~~kvG~dGvI---t--veeg~~~~~~lev~eG~~fd~GylSpyf--vt~~e~~~v 457 (788)
++-.. ..-|++.|.+.--+.++++--.|.. . -..|-.++|+. +|.||+--.- +..|+
T Consensus 157 iarTTL~SKiLsq~kehFaelavdAV~rLkGs~nL~~IqIIK~~Gg~l~dSf-------LDeGFlL~K~igv~qpk---- 225 (527)
T KOG0363|consen 157 IARTTLSSKILSQDKEHFAELAVDAVLRLKGSTNLEAIQIIKKLGGKLEDSF-------LDEGFLLDKKIGVNQPK---- 225 (527)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCCCccceeeehhcCCcccccc-------ccccceeccccCCCCcc----
Confidence 44322 3347777888777777777443322 1 12343444332 4555552222 23333
Q ss_pred Eeccceeecccccc
Q psy14622 458 EFQDALVLLSESKI 471 (788)
Q Consensus 458 ~l~~p~ILitD~kI 471 (788)
..+||.||+.+...
T Consensus 226 riena~iLIANT~m 239 (527)
T KOG0363|consen 226 RIENAKILIANTPM 239 (527)
T ss_pred cccccceEEecCCC
Confidence 35789999876544
No 81
>KOG0361|consensus
Probab=91.36 E-value=0.24 Score=55.62 Aligned_cols=124 Identities=18% Similarity=0.160 Sum_probs=82.8
Q ss_pred cccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeeccccCCcceeeEe---eecccceeecCCCCcchHHHHH
Q psy14622 270 LRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLV---VGKEGVITVKDGKTLTDELEVI 346 (788)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 346 (788)
.|||-|++|-+..-- +.....- ..|.+.+ ++-|||||+-++| +-++.=--|++|-.|--|.+++
T Consensus 59 sNDGATIlKlldivh-PaaktlV------dia~sQD------aEVGDGTTSVv~la~E~lk~~Kpfiedgv~~~~iir~~ 125 (543)
T KOG0361|consen 59 SNDGATILKLLDIVH-PAAKTLV------DIARSQD------AEVGDGTTSVVLLAAEFLKEAKPFIEDGVHPQLIIRAY 125 (543)
T ss_pred ecCcHHHHHHHhhcC-hhHHHHH------HHHhhcc------ccccCCceeEeeeHHHHHHhhhhHhhcCCCHHHHHHHH
Confidence 899999987643322 1111111 1111111 3339999999999 7788888899999999999999
Q ss_pred HHHHHHHHhcCcccceeecc-CCcchh-hhhhhhhccccCCCCCchhhhhhhhhHHHHHHHHHHhhhccC
Q psy14622 347 EAYIYLCLKVGKEGVITVKD-GKTLTD-ELEVIEGMKFDRGYISPYFIIELKLVLEYYIQTYIYLCLKVG 414 (788)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kvG 414 (788)
.+|..+|+++=+|=.++... +++-.. =|.+...+...-.-|++ .++.|..++.+.+..+.
T Consensus 126 rka~~l~v~ki~elav~i~~~~~~~~r~lL~KcA~T~lsSKlI~~--------ek~fF~~MvVDAV~~ld 187 (543)
T KOG0361|consen 126 RKARQLAVEKIKELAVEIDGSSKTELRELLEKCAATALSSKLIRQ--------EKEFFAKMVVDAVLTLD 187 (543)
T ss_pred HHHHHHHHHHHHHheeEecccchhhHHHHHHHHHHHHhhhhhhhh--------hHHHHHHHHHHHHHhhc
Confidence 99999999988888888852 222222 23444444444444444 57788888888777665
No 82
>KOG0359|consensus
Probab=74.00 E-value=1.5 Score=50.11 Aligned_cols=61 Identities=13% Similarity=0.110 Sum_probs=53.0
Q ss_pred hhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhcccccccccccccccccCCCccccccccceeeccc
Q psy14622 173 SSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRFGPEVRGLMLQGVDILAD 252 (788)
Q Consensus 173 ~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~~~~~~~r~~~L~~~~i~~~ 252 (788)
..+++|+-+...+|. =.||++++||+-.|+.|..+.|.+++| +++.++|.+...|+
T Consensus 266 ~r~~kiielk~~vc~---fvvinqkGidp~sld~~a~~gIlaLRR---------------------AKRRNmERL~lacG 321 (520)
T KOG0359|consen 266 QRVRKIIELKRKVCE---FVVINQKGIDPTSLDSLAKSGILALRR---------------------AKRRNMERLVLACG 321 (520)
T ss_pred HHHHHHHHHhhhcce---EEEecccCCCCCcchhhhhcchHHHHH---------------------HhhhhHHHHHHhhc
Confidence 345666677777777 688899999999999999999999998 88899999999999
Q ss_pred ccccC
Q psy14622 253 AMYRL 257 (788)
Q Consensus 253 ~~~~t 257 (788)
-..+|
T Consensus 322 G~a~n 326 (520)
T KOG0359|consen 322 GEAVN 326 (520)
T ss_pred cceec
Confidence 98886
No 83
>KOG0358|consensus
Probab=73.60 E-value=1.4 Score=49.68 Aligned_cols=157 Identities=18% Similarity=0.148 Sum_probs=91.8
Q ss_pred cccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeec-cccCCcceeeEe---eecccceeecCCCCcchHHHH
Q psy14622 270 LRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILA-EDVDGEALSTLV---VGKEGVITVKDGKTLTDELEV 345 (788)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 345 (788)
||||-|+.|-...+- + .+-|.. |+ ++.|. +.||||||--++ .-...-+-...|-.|+-|-+-
T Consensus 65 TNDGaTILk~m~vlh-P----~akmLv--el-------S~aQD~eaGDGTTsVVilaGaLL~~~~~LL~kgiHPtvIsds 130 (534)
T KOG0358|consen 65 TNDGATILKQMNVLH-P----AAKMLV--EL-------SAAQDSEAGDGTTSVVILAGALLEAAEKLLQKGIHPTVISDS 130 (534)
T ss_pred ecChHHHHHHHhhhC-h----HHHHHH--Hh-------hhhccccccCCceEEEEehhhHHHHHHHHHhcCCCchhhhHH
Confidence 889999988766332 1 112211 11 11222 239999998888 555567778999999999999
Q ss_pred HHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccc--cCCCCCchhhhhhhhhHH-HHH----HHHHHhhhccCC-CC
Q psy14622 346 IEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKF--DRGYISPYFIIELKLVLE-YYI----QTYIYLCLKVGK-EG 417 (788)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~----~~~~~~~~kvG~-dG 417 (788)
.|+|..-.++ =|..|+.|+. |++.+..-++.|.|.-.. -|. -+--+.+.++-. +-
T Consensus 131 fq~a~~~~v~-----------------il~~m~~~velsdre~Li~~atTsLnSKvvSq~s~llapmAVdAV~kv~dp~~ 193 (534)
T KOG0358|consen 131 FQSAAKKAVD-----------------ILDEMSVPVELSDRESLIKSATTSLNSKVVSQYSSLLAPMAVDAVLKVIDPEN 193 (534)
T ss_pred HHHHHHHHHH-----------------HHHhcCCCcccCcHHHHHHHHHhHhhHHHHHhhccccchHHHHHHHhccCccc
Confidence 9999776666 5667777654 567677777777665433 222 112233333321 00
Q ss_pred c-------EEE--ecCCccceeEEEEEeeEeccccc-ccccccccCCceeEe
Q psy14622 418 V-------ITV--KDGKTLTDELEVIEGMKFDRGYI-SPYFINTAKGAKVEF 459 (788)
Q Consensus 418 v-------Itv--eeg~~~~~~lev~eG~~fd~Gyl-Spyfvt~~e~~~v~l 459 (788)
. |.+ .-|-+. |..+.++|+-|+.--. || =.|.-++.++-+
T Consensus 194 ~~nvdlkdIkivkklGgtv-dDte~i~glvl~~~~~~~~-gptriekAkIgl 243 (534)
T KOG0358|consen 194 ATNVDLKDIKIVKKLGGTV-DDTELIKGLVLTQKASKSA-GPTRIEKAKIGL 243 (534)
T ss_pred ccccchhhhhhHHhhCCcc-chhhhhcceEEeeecccCC-CcchhhhceeeE
Confidence 0 111 123333 4567788888886544 33 445556655543
No 84
>KOG3633|consensus
Probab=62.95 E-value=98 Score=32.11 Aligned_cols=123 Identities=22% Similarity=0.308 Sum_probs=75.1
Q ss_pred HHHHHHHHHHHHHHHHh----------------------cCChHHHHHHHHHHHhhcCCeEEEEecCCchhhHHHHHHHH
Q psy14622 584 KEDIDRRADQIRDQIEA----------------------TTSDYEREKLQERLARLASGVAVLKVGGSSEVEVNEKKDRV 641 (788)
Q Consensus 584 ~~~I~~R~~~l~~~~~~----------------------~~s~~~~~~L~eRla~LsggvAvI~VGG~Te~EikErk~r~ 641 (788)
-+.++.|+++||+..-+ --|+-||+.+.--+.||++..+++.|-=.|--- .+-++.+
T Consensus 51 LD~lelrVE~LRk~A~~le~eKe~lL~s~~~I~~~~~M~~~se~eREEi~l~~~Rl~~Rt~TVev~VeT~Rn-~~Q~~sL 129 (219)
T KOG3633|consen 51 LDSLELRVEKLRKDALNLEEEKEYLLMSMDLIKSNEMMQNMSEAEREEIILYLQRLSSRTATVEVRVETVRN-NSQEDSL 129 (219)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhhhHHHHHHHHHHHhcccceEEEEEeccCC-hHHHHHH
Confidence 47788999999875432 235678999999999999999998887655221 1222333
Q ss_pred HHHHHHHHHHHHhc---------------------cccCCchhHhhHHHHhhhhhccCccccCCChhhHHHHHHHHHHHH
Q psy14622 642 TDALNATRAAVEEG---------------------IVPGGGTALLRCIAVLDKLETANADQATGKKEDIDRRADQIRDQI 700 (788)
Q Consensus 642 edAl~a~raA~e~G---------------------iVpGGG~all~as~~L~~~~~~~~~~~~G~~~~i~~r~~~l~~~~ 700 (788)
++|-.-.-..++-| .-|.|-+- -+.+.-+. .=..-|+-.|.+|+..|..++
T Consensus 130 ~~at~lIDev~~m~~~~ig~ak~~l~tl~~aCSse~~p~Gpvd----qkF~si~i----gCaldDQK~IKrRLe~Lm~~i 201 (219)
T KOG3633|consen 130 SQATVLIDEVIKMGDPVIGRAKCQLYTLNAACSSEMDPSGPVD----QKFESILI----GCALDDQKNIKRRLEALMAYI 201 (219)
T ss_pred HHHHHHHHHHHHhccchHHHHHHHHHHHHHHhccccCCCCchh----HHHHHHHH----hhhhhhHHHHHHHHHHHHHHH
Confidence 33333322333332 22322220 01110000 012346678999999999999
Q ss_pred HhhcChhHHHHHHHH
Q psy14622 701 EATTSDYEREKLQER 715 (788)
Q Consensus 701 ~~~~~~~d~~~l~eR 715 (788)
++.+-.+.+.+|++.
T Consensus 202 en~~~ehtkad~mdd 216 (219)
T KOG3633|consen 202 ENQTVEHTKADLMDD 216 (219)
T ss_pred HHHHHhhhHhHhhhh
Confidence 999988888877654
No 85
>KOG0364|consensus
Probab=50.26 E-value=16 Score=42.23 Aligned_cols=73 Identities=11% Similarity=0.083 Sum_probs=48.1
Q ss_pred cccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeeccccCCcceeeEe---eecccceeecCCCCcchHHHHH
Q psy14622 270 LRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLV---VGKEGVITVKDGKTLTDELEVI 346 (788)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 346 (788)
|+||-.|...|..--- +..|+ ||.+-+.+ .+-|||||+--+| +-...--....|..|+-+-+..
T Consensus 58 tndg~ailrei~Vahp----aaksm---iel~rtqd------eevgdgttsvi~lagE~L~~~~~~l~~~~Hp~~i~ka~ 124 (527)
T KOG0364|consen 58 TNDGNAILREIDVAHP----AAKSM---IELSRTQD------EEVGDGTTSVIILAGEMLNVAEPFLEEGIHPTVIIKAY 124 (527)
T ss_pred ecCcHHHHHHHhhcCc----chhhH---hhhhhccc------ccccCCceeeeeehHHHhhhcchhhhcCcchHHHHHHH
Confidence 7788777766544321 22344 24444433 2229999999888 3333334677888999998888
Q ss_pred HHHHHHHHh
Q psy14622 347 EAYIYLCLK 355 (788)
Q Consensus 347 ~~~~~~~~~ 355 (788)
-+|.+.|++
T Consensus 125 ~~aled~~~ 133 (527)
T KOG0364|consen 125 IKALEDNIR 133 (527)
T ss_pred HHHHHHHHH
Confidence 888888887
No 86
>KOG0230|consensus
Probab=44.55 E-value=57 Score=43.02 Aligned_cols=181 Identities=20% Similarity=0.257 Sum_probs=120.8
Q ss_pred ceeEEEEEeeEecccccccccccccCCceeEeccceeeccccc---------ccchhhhHHH----HHHHH---hcCCC-
Q psy14622 428 TDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESK---------ISSIQSIIPA----LELAN---SKRKP- 490 (788)
Q Consensus 428 ~~~lev~eG~~fd~GylSpyfvt~~e~~~v~l~~p~ILitD~k---------I~~i~~IlP~----Le~~~---~~~rp- 490 (788)
....+++.|+.|.+-... ++|--.+++|.||+.-.. +++++.++.. |+.++ .+.+|
T Consensus 374 ~~dS~vi~Gvv~sKn~~~-------k~M~~~~e~prilll~g~leyqrisn~lsS~etvlqqE~e~lk~~varI~s~~p~ 446 (1598)
T KOG0230|consen 374 RVDSEVIKGVVCSKNVAH-------KRMATKYENPRILLLGGPLEYQRISNQLSSIETVLQQEKEYLKKVVARIESLRPD 446 (1598)
T ss_pred cccceeeeEEEeecchhh-------hhhhhhccCCceEEEecchhhhhhhccccchHHHHhhHHHHHHHHHHHHHhcCCC
Confidence 446788899999876653 445556667887764433 4444443322 11111 23555
Q ss_pred eEEEecCCChhhHHhHHhhhcccccceeeecCCCCcchhhhhhhhhHhhhCCeEeccCCCCCcccccCcccccceeEEEE
Q psy14622 491 LVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATLQDLAVATGGIVFGDEASPVKLEDLQATDLGSVGEIVI 570 (788)
Q Consensus 491 LLIIAedi~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~~~LeDiAilTGg~vis~~~~g~~l~~v~~~~LG~a~~V~v 570 (788)
+|++-..|.+-|...|.- +|..-|+-||.+ .|+.||..||+..+.. ++.++..-||.|..-.+
T Consensus 447 vllVeksVS~~aqe~L~~---k~I~lvlnvK~s--------~leRIsR~tga~I~~s------iDslt~~klg~C~~F~v 509 (1598)
T KOG0230|consen 447 VLLVEKSVSRIAQELLLD---KGISLVLNVKRS--------LLERISRCTGADIVPS------VDSLTSQKLGYCELFRV 509 (1598)
T ss_pred eEEEechHHHHHHHHhhc---cCeEEEEeccHH--------HHHHHHHHhcCceecc------hhhhhccccCCCccHhh
Confidence 666688999999998874 566677777554 6999999999987753 34477888999987654
Q ss_pred ecCc--------eEEEcCCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHhhcCCeEEEEecCCchhhHHHHHHHHH
Q psy14622 571 TKDD--------TLILKGKGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSEVEVNEKKDRVT 642 (788)
Q Consensus 571 t~d~--------Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~~~~~~L~eRla~LsggvAvI~VGG~Te~EikErk~r~e 642 (788)
-+=. .+++.|... =.| .+|..-|.+..|+++-|.-+.
T Consensus 510 ~~~~e~hk~sKTlmffegc~~---------------------------------~lG--~TiLLrG~~~~eLkkVK~Vvq 554 (1598)
T KOG0230|consen 510 ENYVEEHKPSKTLMFFEGCPK---------------------------------PLG--CTILLRGDSLEELKKVKHVVQ 554 (1598)
T ss_pred hhhhhcccchhhhHHhhcCCC---------------------------------CCC--ceEEecCCCHHHHHHHHHHHH
Confidence 2210 011122111 124 568888999999999999888
Q ss_pred HHHHHHH-HHHHhccccCCchhHhhH
Q psy14622 643 DALNATR-AAVEEGIVPGGGTALLRC 667 (788)
Q Consensus 643 dAl~a~r-aA~e~GiVpGGG~all~a 667 (788)
=.+-|+- -++|.-++.--|+.+..+
T Consensus 555 ~~v~aay~l~LE~SflaDe~asi~~~ 580 (1598)
T KOG0230|consen 555 YLVFAAYHLALETSFLADEGASISSP 580 (1598)
T ss_pred HHHHHHHHHHHhhhhhhccCCccccc
Confidence 7777766 788888988888877543
No 87
>PRK14736 atpC F0F1 ATP synthase subunit epsilon; Provisional
Probab=34.15 E-value=1.1e+02 Score=29.94 Aligned_cols=51 Identities=22% Similarity=0.273 Sum_probs=38.7
Q ss_pred EEecCceEEEcC------CCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHhhcC
Q psy14622 569 VITKDDTLILKG------KGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLAS 619 (788)
Q Consensus 569 ~vt~d~Ttii~g------~g~~~~I~~R~~~l~~~~~~~~s~~~~~~L~eRla~Lsg 619 (788)
.|+.++.+|+-. .=|.+..+++.+..++++..+.++..|..++.|+++|+.
T Consensus 70 eV~~n~v~Ila~~ae~~eeID~~~a~~a~~~Ae~~~~~~~~~~~~~~~~~~~~~~~~ 126 (133)
T PRK14736 70 EIGPTSVTVLAERAAPVEELTPEMIDREIEAVEMERDATQDLDKREALNAQIVQMQE 126 (133)
T ss_pred EEECCEEEEEeeeeEEhhhCCHHHHHHHHHHHHHhhhcCCCHHHHHHHHHHHHHHHH
Confidence 456666555433 226788888888888888888899999999999988875
No 88
>TIGR00255 conserved hypothetical protein TIGR00255. The apparent ortholog from Aquifex aeolicus as reported is split into two consecutive reading frames.
Probab=33.26 E-value=93 Score=34.46 Aligned_cols=67 Identities=24% Similarity=0.352 Sum_probs=49.2
Q ss_pred ccCCChhhHHHHHHHHHHHHHhhcC------hhHHHHHHHHHHHhccCeEEEEecccHHHHHHHHhcchHHHHHHHhCCc
Q psy14622 681 QATGKKEDIDRRADQIRDQIEATTS------DYEREKLQERLARLASGVAVLKVGGSSVEIVKKALRQPCMTIATNAGVD 754 (788)
Q Consensus 681 ~~~G~~~~i~~r~~~l~~~~~~~~~------~~d~~~l~eRla~Lsggvavi~vGa~~~e~~e~~~r~~~a~~a~~Aa~e 754 (788)
+|.-=+.++..|+.+|+..++.... ..=+++|.+|+..|. + .++-+.++-.+-++.|.|+-+.
T Consensus 151 EG~~L~~dl~~rl~~i~~~v~~i~~~~p~~~~~~~~rL~~rl~el~-~----------~~id~~Rl~qEval~adK~DI~ 219 (291)
T TIGR00255 151 EGENLKSDIVQRLDLIEREVKKVRSAMPDILQWQRERLKARIEDLA-Q----------EFLDLNRLEQEAALLAQRIDIA 219 (291)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHh-c----------CCCCHHHHHHHHHHHHHhcchH
Confidence 3444456777787777777665443 445678999999986 3 3456677888899999999999
Q ss_pred hHHH
Q psy14622 755 ASVV 758 (788)
Q Consensus 755 ~g~V 758 (788)
+.++
T Consensus 220 EEl~ 223 (291)
T TIGR00255 220 EEID 223 (291)
T ss_pred HHHH
Confidence 9987
No 89
>PRK13600 putative ribosomal protein L7Ae-like; Provisional
Probab=25.22 E-value=1.5e+02 Score=26.99 Aligned_cols=52 Identities=15% Similarity=0.148 Sum_probs=36.3
Q ss_pred HHHHhcCCCeEEEecCCChhhHHhHHhhhcccccceeeecCCCCcchhhhhhhhhHhhhCCe
Q psy14622 482 ELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATLQDLAVATGGI 543 (788)
Q Consensus 482 e~~~~~~rpLLIIAedi~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~~~LeDiAilTGg~ 543 (788)
..+.+...-+++||+|+|+.....|..=-....++++=| |. ++||-..||-.
T Consensus 23 Kai~kg~~~~v~iA~Da~~~vv~~l~~lceek~Ip~v~V--~s--------~~~LGkAcgi~ 74 (84)
T PRK13600 23 KALKKDQVTSLIIAEDVEVYLMTRVLSQINQKNIPVSFF--KS--------KHALGKHVGIN 74 (84)
T ss_pred HHHhcCCceEEEEeCCCCHHHHHHHHHHHHHcCCCEEEE--CC--------HHHHHHHhCCC
Confidence 444455668999999999998887775555556677666 32 67777777643
No 90
>KOG0357|consensus
Probab=24.90 E-value=65 Score=36.43 Aligned_cols=181 Identities=24% Similarity=0.308 Sum_probs=154.4
Q ss_pred eeccCCCCCcCCCCceeeeecCCCCceEeeChHHhhccccccccccChhhHHHHHHhhhcccccCCCchhHHHHHHHHHH
Q psy14622 7 EQSWGSPKITKDDGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIAK 86 (788)
Q Consensus 7 ~~~~~S~kiLGPkG~nkmI~~~~G~~~ITnDGvTIlk~I~l~d~~ehpgAkLl~e~A~~qd~evGDGTTTavVLA~aLL~ 86 (788)
+..++|+ +||+|++|++..+.|..++|||| . |+.++++...+..|+.++|||||.+++|+.+++.
T Consensus 41 A~~lrtS--LGPkGlDK~l~~pdgditvtndg---------d----~~IakLmv~LS~sqd~eIgdGtTgVvvLa~alle 105 (400)
T KOG0357|consen 41 ARILRTS--LGPKGLDKMLVSPDGDITVTNDG---------V----HQIAKLIVILSKSQDDEIGDGTTGVVVLAGALLE 105 (400)
T ss_pred HHHHHhh--cCccccccccccCCCCceeeecc---------c----hHHHHHHHHhcccchhhhccCCcccEEecccchH
Confidence 4568899 99999999999999999999999 3 7899999999999999999999999999999999
Q ss_pred HHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHhccCCchHHhhHHHHHHHHhhhccccccceee
Q psy14622 87 EGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVTTPEEIAQVATISANGDKAVGELISDAMKRVSAKVEFQDALVL 166 (788)
Q Consensus 87 eglklI~~Gi~P~~I~~Gi~~A~~~ile~L~~ls~~V~d~eeL~~VA~tSan~d~~Ig~LIadAv~kV~~~~e~~d~~IL 166 (788)
++.+++..|+||..|..||+.+...+++.|.+.+.+++ |+.
T Consensus 106 qa~~li~~~ihpiki~~g~e~~~~~av~~l~~i~~~~e--------------------------f~e------------- 146 (400)
T KOG0357|consen 106 QAHELIDRGIHPIKIAQGYEKAKVVAVEHLDEISDPFE--------------------------FEE------------- 146 (400)
T ss_pred hHHhhcccccchhHHHHhhhhHHHhhhhhhhhhccccc--------------------------HHH-------------
Confidence 99999999999999999999999999999998887765 222
Q ss_pred eccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhh----------------cccccccc-----
Q psy14622 167 LSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLR----------------SQNLTPLL----- 225 (788)
Q Consensus 167 ite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~----------------~~~~~~~~----- 225 (788)
.++.++..+-.|+|-+-+||.||=..|.-|+|++|+- ++|+++.|
T Consensus 147 --------------mi~~vK~~ga~l~icqwgfddeanhll~~n~lpavrwVGGpEiEliAiaT~grIVprF~eL~~~kL 212 (400)
T KOG0357|consen 147 --------------MIQQIKETGANLAICQWGFDDEANHLLLQNNLPAVRWVGGPEIELIAIATGGRIVPRFSELTAEKL 212 (400)
T ss_pred --------------HHHHHHhhCCcEEEEecccCchhhhHHhhcCCCceeecCCcceEEEEeecCCeeeccHhhhCHhhc
Confidence 2345677888899999999999999999999999984 34666544
Q ss_pred c-ccccccccCCCccccccccceeecccccccC
Q psy14622 226 R-RAYAKDVRFGPEVRGLMLQGVDILADAMYRL 257 (788)
Q Consensus 226 ~-~~~~k~~~~~~~~r~~~L~~~~i~~~~~~~t 257 (788)
. .+++.++.||-... -+--++.|.|+..||
T Consensus 213 G~aglVrE~sfgttkd--kmlviEqc~nskaVT 243 (400)
T KOG0357|consen 213 GFAGLVREISFGTTKD--KMLVIEQCKNSKAVT 243 (400)
T ss_pred cccceEEEEecccccc--eEEEEEecCCCceEE
Confidence 3 47889999995422 222455667777777
No 91
>PF10805 DUF2730: Protein of unknown function (DUF2730); InterPro: IPR020269 This entry represents a family of various hypothetical proteins. The proteins, which include HI1498 and Gp25, from phage Mu, are currently uncharacterised.
Probab=23.69 E-value=1.1e+02 Score=28.67 Aligned_cols=37 Identities=24% Similarity=0.350 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHHHhcCChHHHHHHHHHHHhhcCCeE
Q psy14622 586 DIDRRADQIRDQIEATTSDYEREKLQERLARLASGVA 622 (788)
Q Consensus 586 ~I~~R~~~l~~~~~~~~s~~~~~~L~eRla~LsggvA 622 (788)
..++|+..++.+++...+.-|-.+|+-+|+++.|.+.
T Consensus 46 ~~~~Rl~~lE~~l~~LPt~~dv~~L~l~l~el~G~~~ 82 (106)
T PF10805_consen 46 EHDRRLQALETKLEHLPTRDDVHDLQLELAELRGELK 82 (106)
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhHHH
Confidence 4589999999999999999999999999999999644
No 92
>PF03592 Terminase_2: Terminase small subunit ; InterPro: IPR005335 Packaging of double-stranded viral DNA concatemers requires interaction of the prohead with virus DNA. This process is mediated by a phage-encoded DNA recognition and terminase protein. The terminase enzymes described so far, which are hetero-oligomers composed of a small and a large subunit, do not have a significant level of sequence homology. The small terminase subunit is thought to form a nucleoprotein structure that helps to position the terminase large subunit at the packaging initiation site [].; GO: 0006323 DNA packaging; PDB: 3ZQP_B 2CMP_A 3ZQO_C 3ZQN_B 3ZQQ_B 3ZQM_D.
Probab=22.99 E-value=2e+02 Score=27.87 Aligned_cols=62 Identities=23% Similarity=0.284 Sum_probs=41.5
Q ss_pred HHHHHHHHHhccccCCchhHhhHHHHhhhhhccCccccCCChhhHHHHHHHHHHHHHhhcChhHHHHHHHHHHHhccC
Q psy14622 645 LNATRAAVEEGIVPGGGTALLRCIAVLDKLETANADQATGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASG 722 (788)
Q Consensus 645 l~a~raA~e~GiVpGGG~all~as~~L~~~~~~~~~~~~G~~~~i~~r~~~l~~~~~~~~~~~d~~~l~eRla~Lsgg 722 (788)
.|+++||+.-|+ -.-+|--.++..|. ...|.+++++++++.... ...+.+...++|.+..-+
T Consensus 16 ~Nat~Aa~~AGy--s~ktA~~~asrLL~-------------n~~V~~~I~~~~~e~~~~-~~~t~~~vl~~l~~ia~~ 77 (144)
T PF03592_consen 16 GNATQAAIKAGY--SEKTARANASRLLR-------------NPKVKAYIEELMKEREER-AIITADEVLEELTEIAFG 77 (144)
T ss_dssp T-HHHHHHTTTS---CTTHHHHHHHHTT-------------SHHHHHHHHHHHHHHSSS--S--HHHHHHHHHHHHTT
T ss_pred CCHHHHHHhhcC--CcCcHHHHHHHHHc-------------CCchHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHHhh
Confidence 799999999999 33345555555542 246899999999988754 456788888777776544
No 93
>TIGR01216 ATP_synt_epsi ATP synthase, F1 epsilon subunit (delta in mitochondria). This model describes one of the five types of subunits in the F1 part of F1/F0 ATP synthases. Members of this family are designated epsilon in bacterial and chloroplast systems but designated delta in mitochondria, where the counterpart of the bacterial delta subunit is designated OSCP. In a few cases (Propionigenium modestum, Acetobacterium woodii) scoring above the trusted cutoff and designated here as exceptions, Na+ replaces H+ for translocation.
Probab=21.98 E-value=2.5e+02 Score=27.07 Aligned_cols=36 Identities=8% Similarity=0.175 Sum_probs=29.7
Q ss_pred CCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHhh
Q psy14622 582 GKKEDIDRRADQIRDQIEATTSDYEREKLQERLARL 617 (788)
Q Consensus 582 g~~~~I~~R~~~l~~~~~~~~s~~~~~~L~eRla~L 617 (788)
-|.+..+++++..++++....++.++.+.+.+|.+.
T Consensus 87 id~~~a~~~~~~ae~~l~~~~~~~~~~~a~~~l~~a 122 (130)
T TIGR01216 87 IDEAEAEKALEAAEKLLESAEDDKDLAEALLKLKKA 122 (130)
T ss_pred CCHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHH
Confidence 478889999999999998888888888887776654
No 94
>PF04316 FlgM: Anti-sigma-28 factor, FlgM; InterPro: IPR007412 FlgM binds and inhibits the activity of the transcription factor sigma 28. Inhibition of sigma 28 prevents the expression of genes from flagellar transcriptional class 3, which include genes for the filament and chemotaxis. Correctly assembled basal body-hook structures export FlgM, relieving inhibition of sigma 28 and allowing expression of class 3 genes. NMR studies show that free FlgM is mostly unfolded, which may facilitate its export. The C-terminal half of FlgM adopts a tertiary structure when it binds to sigma 28. All mutations in FlgM that prevent sigma 28 inhibition affect the C-terminal domain and is the region thought to constitute the binding domain. A minimal binding domain has been identified between Glu 64 and Arg 88 in Salmonella typhimurium (P26477 from SWISSPROT).The N-terminal portion remains unstructured and may be necessary for recognition by the export machinery [].; GO: 0045892 negative regulation of transcription, DNA-dependent, 0019861 flagellum; PDB: 1RP3_B 1SC5_B.
Probab=21.92 E-value=1.4e+02 Score=24.89 Aligned_cols=30 Identities=20% Similarity=0.348 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHHhhcChhHHHHHHHHHHH
Q psy14622 689 IDRRADQIRDQIEATTSDYEREKLQERLAR 718 (788)
Q Consensus 689 i~~r~~~l~~~~~~~~~~~d~~~l~eRla~ 718 (788)
=.+|+++|+++++.-++..|-+++.+++-.
T Consensus 26 r~~kV~~ik~~I~~G~Y~vd~~~iA~~ml~ 55 (57)
T PF04316_consen 26 RAEKVAEIKAAIASGTYKVDAEKIAEKMLD 55 (57)
T ss_dssp SHHHHHHHHHHHHTT-----HHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCCCCCHHHHHHHHHh
Confidence 358999999999999999999999888765
No 95
>PRK11820 hypothetical protein; Provisional
Probab=21.34 E-value=2.4e+02 Score=31.18 Aligned_cols=66 Identities=26% Similarity=0.316 Sum_probs=48.1
Q ss_pred ccCCChhhHHHHHHHHHHHHHhhcCh------hHHHHHHHHHHHhccCeEEEEecccHHHHHHHHhcchHHHHHHHhCCc
Q psy14622 681 QATGKKEDIDRRADQIRDQIEATTSD------YEREKLQERLARLASGVAVLKVGGSSVEIVKKALRQPCMTIATNAGVD 754 (788)
Q Consensus 681 ~~~G~~~~i~~r~~~l~~~~~~~~~~------~d~~~l~eRla~Lsggvavi~vGa~~~e~~e~~~r~~~a~~a~~Aa~e 754 (788)
+|.-=+.++..|+.+|+..++....- .=+++|.+|++.|. .++-+.++-.+-++.|.|+-+.
T Consensus 149 EG~~L~~dl~~rl~~i~~~~~~i~~~~p~~~~~~~~rL~~rl~el~------------~~~d~~Rl~qEval~adK~DI~ 216 (288)
T PRK11820 149 EGAALKADLLQRLDAIEALVAKIEALAPEILEEYRERLRERLEELL------------GELDENRLEQEVALLAQKADIA 216 (288)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHH------------hhcCHHHHHHHHHHHHHHcchH
Confidence 34444567788888888777654432 33677889999985 1345677778889999999999
Q ss_pred hHHH
Q psy14622 755 ASVV 758 (788)
Q Consensus 755 ~g~V 758 (788)
+.++
T Consensus 217 EEi~ 220 (288)
T PRK11820 217 EELD 220 (288)
T ss_pred HHHH
Confidence 9987
Done!