Query psy14622
Match_columns 788
No_of_seqs 264 out of 2388
Neff 5.2
Searched_HMMs 29240
Date Fri Aug 16 16:27:24 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14622.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14622hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1kp8_A Groel protein; chaperon 100.0 2E-103 7E-108 899.1 43.3 471 6-786 22-492 (547)
2 3rtk_A 60 kDa chaperonin 2; he 100.0 1E-103 4E-108 900.3 39.6 469 6-786 22-490 (546)
3 1iok_A Chaperonin 60; chaperon 100.0 2E-102 8E-107 890.5 37.6 471 6-786 23-494 (545)
4 1we3_A CPN60(groel); chaperoni 100.0 3E-101 9E-106 881.5 44.5 470 6-786 22-494 (543)
5 3p9d_C T-complex protein 1 sub 100.0 5.2E-80 1.8E-84 711.1 29.6 453 6-786 31-555 (590)
6 3iyg_E T-complex protein 1 sub 100.0 9.3E-75 3.2E-79 659.4 34.0 428 6-786 22-484 (515)
7 3p9d_A T-complex protein 1 sub 100.0 1.5E-75 5.1E-80 671.5 26.6 423 6-786 36-517 (559)
8 3iyg_D T-complex protein 1 sub 100.0 8.1E-74 2.8E-78 652.1 36.1 423 6-786 23-487 (518)
9 3iyg_H T-complex protein 1 sub 100.0 1.5E-73 5.3E-78 649.3 37.1 415 6-786 23-483 (515)
10 1a6d_A Thermosome (alpha subun 100.0 1.5E-73 5.1E-78 653.3 36.3 416 6-786 34-491 (545)
11 3ko1_A Chaperonin; 9-fold symm 100.0 1.1E-73 3.9E-78 655.1 35.3 418 6-786 42-502 (553)
12 3ruv_A Chaperonin, CPN; double 100.0 6.5E-74 2.2E-78 656.0 32.5 414 6-786 31-488 (543)
13 3p9d_D T-complex protein 1 sub 100.0 7.4E-74 2.5E-78 653.6 32.3 421 6-786 31-497 (528)
14 1q3q_A Thermosome alpha subuni 100.0 2.3E-73 7.9E-78 652.1 36.1 417 6-786 35-494 (548)
15 3iyg_B T-complex protein 1 sub 100.0 5.6E-73 1.9E-77 644.5 37.8 410 6-786 22-480 (513)
16 3iyg_Q T-complex protein 1 sub 100.0 5.2E-73 1.8E-77 644.6 37.4 422 6-786 23-481 (512)
17 1a6d_B Thermosome (beta subuni 100.0 6.2E-73 2.1E-77 648.0 36.5 417 6-786 33-492 (543)
18 3p9d_B T-complex protein 1 sub 100.0 1.8E-74 6.2E-79 658.7 21.8 407 6-786 29-487 (527)
19 3p9d_E T-complex protein 1 sub 100.0 4.8E-73 1.6E-77 651.1 33.2 422 6-786 57-527 (562)
20 3p9d_G T-complex protein 1 sub 100.0 5.7E-73 1.9E-77 649.0 25.1 417 6-786 36-496 (550)
21 3iyg_Z T-complex protein 1 sub 100.0 1.1E-71 3.7E-76 634.4 32.9 421 6-786 22-486 (517)
22 3iyg_A T-complex protein 1 sub 100.0 1.6E-70 5.6E-75 626.3 36.5 423 6-786 22-497 (529)
23 3p9d_F T-complex protein 1 sub 100.0 8.7E-72 3E-76 638.9 13.2 417 6-786 29-506 (546)
24 3aq1_B Thermosome subunit; gro 100.0 1.4E-68 4.7E-73 606.8 31.5 402 24-786 1-445 (500)
25 3iyg_G T-complex protein 1 sub 100.0 2.8E-67 9.6E-72 598.0 36.3 417 6-786 21-483 (515)
26 3p9d_H T-complex protein 1 sub 100.0 1.8E-68 6.1E-73 613.9 25.5 420 6-786 38-517 (568)
27 3m6c_A 60 kDa chaperonin 1; ch 100.0 5.1E-69 1.7E-73 534.8 13.1 194 430-624 1-194 (194)
28 3osx_A 60 kDa chaperonin; alph 100.0 6.3E-67 2.2E-71 520.9 15.6 190 433-623 11-200 (201)
29 1srv_A Protein (groel (HSP60 c 100.0 5.4E-54 1.8E-58 409.9 13.2 144 436-580 1-144 (145)
30 3rtk_A 60 kDa chaperonin 2; he 100.0 7.5E-31 2.6E-35 300.1 -1.8 383 229-758 1-410 (546)
31 1kp8_A Groel protein; chaperon 100.0 3.6E-31 1.2E-35 303.0 -7.1 390 229-758 1-411 (547)
32 1iok_A Chaperonin 60; chaperon 99.9 2.8E-30 9.4E-35 295.7 -3.6 394 229-758 2-412 (545)
33 1we3_A CPN60(groel); chaperoni 99.9 1E-29 3.5E-34 291.0 -5.6 393 230-758 2-410 (543)
34 3p9d_C T-complex protein 1 sub 99.8 3.2E-22 1.1E-26 230.9 -11.1 389 232-755 13-465 (590)
35 3p9d_B T-complex protein 1 sub 99.8 7E-23 2.4E-27 233.9 -21.0 349 231-756 10-398 (527)
36 1srv_A Protein (groel (HSP60 c 99.7 2.4E-18 8.1E-23 164.7 2.1 93 156-258 20-112 (145)
37 3osx_A 60 kDa chaperonin; alph 99.7 8.1E-18 2.8E-22 168.2 2.4 93 156-258 33-125 (201)
38 3m6c_A 60 kDa chaperonin 1; ch 99.7 1.2E-17 3.9E-22 166.7 2.1 93 156-258 26-118 (194)
39 3iyg_Q T-complex protein 1 sub 99.6 1.1E-17 3.6E-22 190.7 -2.8 197 237-471 10-230 (512)
40 3iyg_D T-complex protein 1 sub 99.6 4.5E-17 1.5E-21 185.7 0.8 199 233-474 6-235 (518)
41 3p9d_G T-complex protein 1 sub 99.5 2.7E-17 9.1E-22 188.9 -9.9 152 232-415 18-191 (550)
42 3iyg_B T-complex protein 1 sub 99.5 3.4E-16 1.1E-20 178.4 -4.4 153 232-416 4-180 (513)
43 3iyg_G T-complex protein 1 sub 99.4 1.3E-14 4.4E-19 165.5 -4.6 157 236-425 7-176 (515)
44 3iyg_H T-complex protein 1 sub 99.4 5.3E-14 1.8E-18 160.5 -1.0 148 236-415 9-179 (515)
45 3p9d_E T-complex protein 1 sub 99.3 3.9E-15 1.3E-19 171.4 -11.2 159 231-424 38-214 (562)
46 3p9d_D T-complex protein 1 sub 99.2 1.2E-13 4.2E-18 157.9 -6.6 163 228-422 9-192 (528)
47 3p9d_A T-complex protein 1 sub 99.2 3.6E-13 1.2E-17 155.0 -4.4 162 229-422 15-201 (559)
48 3iyg_E T-complex protein 1 sub 99.2 4.7E-13 1.6E-17 152.6 -6.6 203 232-472 4-234 (515)
49 3ko1_A Chaperonin; 9-fold symm 99.1 9E-13 3.1E-17 151.5 -6.0 157 232-418 24-199 (553)
50 3ruv_A Chaperonin, CPN; double 99.1 8E-13 2.7E-17 151.6 -7.6 156 232-419 13-188 (543)
51 1q3q_A Thermosome alpha subuni 99.0 2.3E-12 8E-17 147.9 -8.1 153 231-416 16-188 (548)
52 1a6d_A Thermosome (alpha subun 99.0 3.2E-12 1.1E-16 146.8 -8.1 152 231-416 15-185 (545)
53 1a6d_B Thermosome (beta subuni 99.0 6.9E-12 2.4E-16 143.9 -6.0 160 231-421 14-193 (543)
54 3iyg_A T-complex protein 1 sub 99.0 1E-11 3.5E-16 142.0 -4.8 151 232-414 4-174 (529)
55 3p9d_H T-complex protein 1 sub 98.9 2.1E-11 7.1E-16 140.6 -5.9 149 237-416 25-192 (568)
56 3iyg_Z T-complex protein 1 sub 98.9 1.6E-11 5.6E-16 140.1 -6.7 156 235-425 7-175 (517)
57 3p9d_F T-complex protein 1 sub 98.9 1.6E-11 5.5E-16 141.0 -7.8 178 232-444 11-204 (546)
58 1gml_A T-complex protein 1 sub 98.5 4.2E-07 1.4E-11 90.2 11.4 129 432-584 5-161 (178)
59 3aq1_B Thermosome subunit; gro 98.4 2.1E-08 7.2E-13 114.1 -2.4 124 264-420 4-144 (500)
60 1ass_A Thermosome; chaperonin, 98.3 1.9E-06 6.4E-11 84.2 9.8 126 434-583 1-153 (159)
61 1ass_A Thermosome; chaperonin, 43.7 9.4 0.00032 36.7 2.0 57 180-257 63-119 (159)
62 1gml_A T-complex protein 1 sub 38.7 12 0.0004 36.7 1.8 57 180-257 69-125 (178)
63 4e18_B Catenin alpha-1; four h 37.0 18 0.00061 29.7 2.3 44 608-654 6-49 (59)
64 1c8b_A Spore protease; novel f 24.2 1.1E+02 0.0038 33.4 6.4 81 450-530 66-172 (371)
65 2rd5_A Acetylglutamate kinase- 22.8 91 0.0031 32.5 5.4 47 614-664 31-81 (298)
66 2ymb_A MITD1, MIT domain-conta 22.5 79 0.0027 33.0 4.8 54 418-487 99-152 (257)
67 2v5h_A Acetylglutamate kinase; 21.7 77 0.0026 33.6 4.7 47 614-664 44-94 (321)
68 2ap9_A NAG kinase, acetylgluta 20.0 1.1E+02 0.0038 31.8 5.4 47 614-664 20-70 (299)
No 1
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=100.00 E-value=2e-103 Score=899.07 Aligned_cols=471 Identities=53% Similarity=0.827 Sum_probs=451.7
Q ss_pred EeeccCCCCCcCCCCceeeeecCCCCceEeeChHHhhccccccccccChhhHHHHHHhhhcccccCCCchhHHHHHHHHH
Q psy14622 6 LEQSWGSPKITKDDGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIA 85 (788)
Q Consensus 6 i~~~~~S~kiLGPkG~nkmI~~~~G~~~ITnDGvTIlk~I~l~d~~ehpgAkLl~e~A~~qd~evGDGTTTavVLA~aLL 85 (788)
+++.++|+ |||+||||||++++|+|+|||||+||+|+|++++||||++|||++++|++||+++||||||+||||++|+
T Consensus 22 la~~vktt--LGPkG~~kmi~~~~G~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~~qd~e~GDGTTtvvVLA~~Ll 99 (547)
T 1kp8_A 22 LADAVKVT--LGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAII 99 (547)
T ss_dssp HHHHHHTT--CSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHH
T ss_pred HHHHHHhc--cCCCCCeEEEECCCCCeEEEcCHHHHHHHccccChhhhHHHHHHHHHHHhhccccCCCcchhHHHHHHHH
Confidence 34668889 9999999999999999999999999999999998888889999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHhccCCchHHhhHHHHHHHHhhhcccccccee
Q psy14622 86 KEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVTTPEEIAQVATISANGDKAVGELISDAMKRVSAKVEFQDALV 165 (788)
Q Consensus 86 ~eglklI~~Gi~P~~I~~Gi~~A~~~ile~L~~ls~~V~d~eeL~~VA~tSan~d~~Ig~LIadAv~kV~~~~e~~d~~I 165 (788)
+++++++++|+||+.|++||++|++.+++.|+++++|+++.++|.+||++|++++++||+++++||.+
T Consensus 100 ~ea~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~e~l~~vA~iS~~~~~~i~~liadAv~~------------ 167 (547)
T 1kp8_A 100 TEGLKAVAAGMNPMDLKRGIDKAVTVAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDK------------ 167 (547)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCBCCCSHHHHHHHHHHHTTSCHHHHHHHHHHHHH------------
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCHHHHHHHHHHhccchhHHHHHHHHHHHH------------
Confidence 99999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred eeccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhcccccccccccccccccCCCcccccccc
Q psy14622 166 LLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRFGPEVRGLMLQ 245 (788)
Q Consensus 166 Lite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~~~~~~~r~~~L~ 245 (788)
T Consensus 168 -------------------------------------------------------------------------------- 167 (547)
T 1kp8_A 168 -------------------------------------------------------------------------------- 167 (547)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceeecccccccCcccccccccccccccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeeccccCCcceeeEee
Q psy14622 246 GVDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVV 325 (788)
Q Consensus 246 ~~~i~~~~~~~tp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 325 (788)
T Consensus 168 -------------------------------------------------------------------------------- 167 (547)
T 1kp8_A 168 -------------------------------------------------------------------------------- 167 (547)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccccCCCCCchhhhhhhhhHHHHHHH
Q psy14622 326 GKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFIIELKLVLEYYIQT 405 (788)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (788)
T Consensus 168 -------------------------------------------------------------------------------- 167 (547)
T 1kp8_A 168 -------------------------------------------------------------------------------- 167 (547)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhhccCCCCcEEEecCCccceeEEEEEeeEecccccccccccccCCceeEeccceeecccccccchhhhHHHHHHHH
Q psy14622 406 YIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESKISSIQSIIPALELAN 485 (788)
Q Consensus 406 ~~~~~~kvG~dGvItveeg~~~~~~lev~eG~~fd~GylSpyfvt~~e~~~v~l~~p~ILitD~kI~~i~~IlP~Le~~~ 485 (788)
||++|+|+|++|+++++++++++||.||+||+||||+|++++|..+++|||||++|.+|+++++++|+||.+.
T Consensus 168 -------V~~dg~I~Ve~G~~~~ds~~lveG~~fdkg~~~p~~vt~~~~m~~~lenp~Ill~d~~Is~~~~l~~~le~i~ 240 (547)
T 1kp8_A 168 -------VGKEGVITVEDGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAVA 240 (547)
T ss_dssp -------HCTTSEEEEECCSSSSCEEEEESCEEESCCBSSTTCCSBTTTTBEEEESCEEECEESEECCGGGTHHHHHHHH
T ss_pred -------hCcCCcEEEEeCCccccccEEEecEEEecCccccccccCcccCceEecCceEEEEcCcCCCHHHHHHHHHHHH
Confidence 5667889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCeEEEecCCChhhHHhHHhhhcccccceeeecCCCCcchhhhhhhhhHhhhCCeEeccCCCCCcccccCcccccce
Q psy14622 486 SKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATLQDLAVATGGIVFGDEASPVKLEDLQATDLGSV 565 (788)
Q Consensus 486 ~~~rpLLIIAedi~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~~~LeDiAilTGg~vis~~~~g~~l~~v~~~~LG~a 565 (788)
+.++||||++++|+++||++|+.|++||+++|+|||+|+||++|++.|+|||++|||++++++ .|.+++++++++||+|
T Consensus 241 ~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~rk~~le~ia~~tG~~ii~~~-~g~~l~~~~~~~LG~a 319 (547)
T 1kp8_A 241 KAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTVISEE-IGMELEKATLEDLGQA 319 (547)
T ss_dssp GGGCCEEEEESEECHHHHHHHHHHGGGTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCEEGG-GTCCSTTCCTTTSEEE
T ss_pred hcCCCEEEECCCcCHHHHHHHHhcccccceeEEEEeccccccccHHHHHHHHHHhCCeEeccc-ccCCcccCCHHHCCce
Confidence 999999999999999999999999999999999999999999999999999999999999998 8999999999999999
Q ss_pred eEEEEecCceEEEcCCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHhhcCCeEEEEecCCchhhHHHHHHHHHHHH
Q psy14622 566 GEIVITKDDTLILKGKGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSEVEVNEKKDRVTDAL 645 (788)
Q Consensus 566 ~~V~vt~d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~~~~~~L~eRla~LsggvAvI~VGG~Te~EikErk~r~edAl 645 (788)
++|++++++|++++|.+++++++.|++|||.|++.++|+|||++|+||||||+|++++|.|||+|+.|++|++++++|||
T Consensus 320 ~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~~~~~tI~vrG~te~~l~E~kr~i~DAl 399 (547)
T 1kp8_A 320 KRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDAL 399 (547)
T ss_dssp EEEEECSSCEEEEEECCCHHHHHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHHHCEEEEECCCSSHHHHHHHHHHHHHHH
T ss_pred eEEEEccceEEEEcCCCCHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHhcCCeEEEEEcCCcHhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccccCCchhHhhHHHHhhhhhccCccccCCChhhHHHHHHHHHHHHHhhcChhHHHHHHHHHHHhccCeEE
Q psy14622 646 NATRAAVEEGIVPGGGTALLRCIAVLDKLETANADQATGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAV 725 (788)
Q Consensus 646 ~a~raA~e~GiVpGGG~all~as~~L~~~~~~~~~~~~G~~~~i~~r~~~l~~~~~~~~~~~d~~~l~eRla~Lsggvav 725 (788)
|++|+|+++|||||||+++++++..|+++...+.+++.|
T Consensus 400 ~~~r~av~~giVpGGGa~e~~~s~~L~~~~~~~g~~q~~----------------------------------------- 438 (547)
T 1kp8_A 400 HATRAAVEEGVVAGGGVALIRVASKLADLRGQNADQNVG----------------------------------------- 438 (547)
T ss_dssp HHHHHHHHHCEEETTTHHHHHHHHHTTTCCCSSHHHHHH-----------------------------------------
T ss_pred HHHHHhccCCEEeCCcHHHHHHHHHHHHHhccCchHHHH-----------------------------------------
Confidence 999999999999999999999999997654222233323
Q ss_pred EEecccHHHHHHHHhcchHHHHHHHhCCchHHHHHHHhcCCCCeeEEcCCCcccchhhcCC
Q psy14622 726 LKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVLESSGEMGYDAMNNEYVNMIQKVL 786 (788)
Q Consensus 726 i~vGa~~~e~~e~~~r~~~a~~a~~Aa~e~g~Vv~~~~~~~~~~Gyda~~~~~~dm~~~Gi 786 (788)
+++..++++.|.+++|.|||+++..|+.++++.+..+|||+.+|+|+||+++||
T Consensus 439 -------i~~~a~ALe~ip~~la~NaG~d~~~vv~~l~~~~~~~G~d~~~g~~~dm~~~gI 492 (547)
T 1kp8_A 439 -------IKVALRAMEAPLRQIVLNCGEEPSVVANTVKGGDGNYGYNAATEEYGNMIDMGI 492 (547)
T ss_dssp -------HHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHHSCTTEEEETTTTEEEETTTTTC
T ss_pred -------HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhcCCCEeEeCCCCccccchhcCc
Confidence 899999999999999999999999999999987678999999999999999997
No 2
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=100.00 E-value=1.1e-103 Score=900.28 Aligned_cols=469 Identities=48% Similarity=0.771 Sum_probs=406.4
Q ss_pred EeeccCCCCCcCCCCceeeeecCCCCceEeeChHHhhccccccccccChhhHHHHHHhhhcccccCCCchhHHHHHHHHH
Q psy14622 6 LEQSWGSPKITKDDGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIA 85 (788)
Q Consensus 6 i~~~~~S~kiLGPkG~nkmI~~~~G~~~ITnDGvTIlk~I~l~d~~ehpgAkLl~e~A~~qd~evGDGTTTavVLA~aLL 85 (788)
+++.++|+ |||+||||||++++|+|+|||||+||+|+|++++|++|+||||++++|++||+++||||||+||||++|+
T Consensus 22 la~~vktt--LGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hp~~n~gAkll~e~a~~qd~e~GDGTTtvvVLAgeLL 99 (546)
T 3rtk_A 22 LADAVKVT--LGPKGRNVVLEKKWGAPTITNDGVSIAKEIELEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALV 99 (546)
T ss_dssp -----------------------------------------CCCHHHHHHHHHHHHHHTSCC-------CHHHHHHHHHH
T ss_pred HHHHHHhc--cCCCCCeEEEECCCCCeEEECcHHHHHHHccCCChhhhHHHHHHHHHHHhhhhhhCCCcchHHHHHHHHH
Confidence 56788999 9999999999999999999999999999999998888888999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHhccCCchHHhhHHHHHHHHhhhcccccccee
Q psy14622 86 KEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVTTPEEIAQVATISANGDKAVGELISDAMKRVSAKVEFQDALV 165 (788)
Q Consensus 86 ~eglklI~~Gi~P~~I~~Gi~~A~~~ile~L~~ls~~V~d~eeL~~VA~tSan~d~~Ig~LIadAv~kV~~~~e~~d~~I 165 (788)
++|++++++|+||+.|++||++|++.+++.|+++++|+++.++|.+||++|++ ++.||+++++||.+
T Consensus 100 ~ea~~li~~GihP~~I~~G~~~A~~~a~e~L~~~s~~v~~~e~L~~vA~iS~~-~~~i~~liadAv~~------------ 166 (546)
T 3rtk_A 100 REGLRNVAAGANPLGLKRGIEKAVEKVTETLLKGAKEVETKEQIAATAAISAG-DQSIGDLIAEAMDK------------ 166 (546)
T ss_dssp HHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCCSHHHHHHHHHHHHT-CHHHHHHHHHHHHH------------
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCChHHHHhHeEEeCC-chHHHHHHHHHHHH------------
Confidence 99999999999999999999999999999999999999999999999999998 88899999999987
Q ss_pred eeccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhcccccccccccccccccCCCcccccccc
Q psy14622 166 LLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRFGPEVRGLMLQ 245 (788)
Q Consensus 166 Lite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~~~~~~~r~~~L~ 245 (788)
T Consensus 167 -------------------------------------------------------------------------------- 166 (546)
T 3rtk_A 167 -------------------------------------------------------------------------------- 166 (546)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceeecccccccCcccccccccccccccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeeccccCCcceeeEee
Q psy14622 246 GVDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVV 325 (788)
Q Consensus 246 ~~~i~~~~~~~tp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 325 (788)
T Consensus 167 -------------------------------------------------------------------------------- 166 (546)
T 3rtk_A 167 -------------------------------------------------------------------------------- 166 (546)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccccCCCCCchhhhhhhhhHHHHHHH
Q psy14622 326 GKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFIIELKLVLEYYIQT 405 (788)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (788)
T Consensus 167 -------------------------------------------------------------------------------- 166 (546)
T 3rtk_A 167 -------------------------------------------------------------------------------- 166 (546)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhhccCCCCcEEEecCCccceeEEEEEeeEecccccccccccccCCceeEeccceeecccccccchhhhHHHHHHHH
Q psy14622 406 YIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESKISSIQSIIPALELAN 485 (788)
Q Consensus 406 ~~~~~~kvG~dGvItveeg~~~~~~lev~eG~~fd~GylSpyfvt~~e~~~v~l~~p~ILitD~kI~~i~~IlP~Le~~~ 485 (788)
||+||+|+|++++++.+++++++||.||+||+||||+|++++|..+++|||||++|.+|+++++++|+|+++.
T Consensus 167 -------V~~dgvI~Ve~~~~~~~ds~lveGm~fdkg~~sp~~vt~~e~m~~~len~kIll~d~kIs~~~~l~~~le~I~ 239 (546)
T 3rtk_A 167 -------VGNEGVITVEESNTFGLQLELTEGMRFDKGYISGYFVTDPERQEAVLEDPYILLVSSKVSTVKDLLPLLEKVI 239 (546)
T ss_dssp -------SCTTSEEEEECCSSSSCEEEEECEEEESCCBSSGGGCSBTTTTBEEEESCEEEEBSSEECCSTTTHHHHHHHH
T ss_pred -------hccCCceEEEecCCcccceEEeeeEEEcCCccCcccccCcccCeeEecccEEEEECCccCCHHHHHHHHHHHH
Confidence 6678899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCeEEEecCCChhhHHhHHhhhcccccceeeecCCCCcchhhhhhhhhHhhhCCeEeccCCCCCcccccCcccccce
Q psy14622 486 SKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATLQDLAVATGGIVFGDEASPVKLEDLQATDLGSV 565 (788)
Q Consensus 486 ~~~rpLLIIAedi~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~~~LeDiAilTGg~vis~~~~g~~l~~v~~~~LG~a 565 (788)
+.++||||++++|+++||++|+.|++||+++++|||+|+||++|++.|+|||++|||++++++ .|++++++++++||+|
T Consensus 240 ~~g~~lvIi~~~I~~~Al~~L~~n~lrg~~~v~aVk~~~~~~~rk~~le~ia~~tG~~ii~~~-~~~~l~~~~~~~LG~a 318 (546)
T 3rtk_A 240 GAGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRKAMLQDMAILTGGQVISEE-VGLTLENADLSLLGKA 318 (546)
T ss_dssp TTTCCEEEEESEECHHHHHHHHHHHHHSSCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCSS-SSCCSTTCCTTTSEEE
T ss_pred hcCCCEEEEcCCCCHHHHHHHHHhCCCCceEEEEeccccccccchhhHHHHHHHhCCEEeecc-ccCccccCCHhhCCee
Confidence 999999999999999999999999999999999999999999999999999999999999998 7999999999999999
Q ss_pred eEEEEecCceEEEcCCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHhhcCCeEEEEecCCchhhHHHHHHHHHHHH
Q psy14622 566 GEIVITKDDTLILKGKGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSEVEVNEKKDRVTDAL 645 (788)
Q Consensus 566 ~~V~vt~d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~~~~~~L~eRla~LsggvAvI~VGG~Te~EikErk~r~edAl 645 (788)
++|++++|+|+++.|.++++++..|++|||.|++.++|+|||++|+|||+||+||+|+|.|||+|+.+++|++++++|||
T Consensus 319 ~~v~i~~d~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~g~~atI~vrG~te~~l~E~er~l~DAl 398 (546)
T 3rtk_A 319 RKVVVTKDETTIVEGAGDTDAIAGRVAQIRQEIENSDSDYDREKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAV 398 (546)
T ss_dssp EEEEECSSCEEEEEECSCHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHCEEEEECCCCSSTHHHHHHHHHHHHH
T ss_pred EEEEEcCCeEEEEcCCCCHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEeCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccccCCchhHhhHHHHhhhhhccCccccCCChhhHHHHHHHHHHHHHhhcChhHHHHHHHHHHHhccCeEE
Q psy14622 646 NATRAAVEEGIVPGGGTALLRCIAVLDKLETANADQATGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAV 725 (788)
Q Consensus 646 ~a~raA~e~GiVpGGG~all~as~~L~~~~~~~~~~~~G~~~~i~~r~~~l~~~~~~~~~~~d~~~l~eRla~Lsggvav 725 (788)
|++|+|+++|+|||||+++++++..|+++. .+.+++.|
T Consensus 399 ~a~r~av~~giVpGGGa~e~~~s~~L~~~~-~~g~eq~~----------------------------------------- 436 (546)
T 3rtk_A 399 RNAKAAVEEGIVAGGGVTLLQAAPTLDELK-LEGDEATG----------------------------------------- 436 (546)
T ss_dssp HHHHHHHHHCEEETTTHHHHTTGGGSTTSC-CCTTHHHH-----------------------------------------
T ss_pred HHHHHHHhCCcccCCcHHHHHHHHHHHHhc-cccHHHHH-----------------------------------------
Confidence 999999999999999999999999997754 33344444
Q ss_pred EEecccHHHHHHHHhcchHHHHHHHhCCchHHHHHHHhcCCCCeeEEcCCCcccchhhcCC
Q psy14622 726 LKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVLESSGEMGYDAMNNEYVNMIQKVL 786 (788)
Q Consensus 726 i~vGa~~~e~~e~~~r~~~a~~a~~Aa~e~g~Vv~~~~~~~~~~Gyda~~~~~~dm~~~Gi 786 (788)
++...++++.|.+++|.|||+++..|+.++++...++|||+.+|+|+||+++||
T Consensus 437 -------i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~~~~~G~d~~~g~~~Dm~~~gI 490 (546)
T 3rtk_A 437 -------ANIVKVALEAPLKQIAFNSGLEPGVVAEKVRNLPAGHGLNAQTGVYEDLLAAGV 490 (546)
T ss_dssp -------HHHHHHHTTHHHHHHHTTTTCCHHHHHHHHHHSCTTEECCSSSCCCEETTTTTC
T ss_pred -------HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhcCCEeEcCCCCcEeeHHHcCC
Confidence 899999999999999999999999999999886566999999999999999997
No 3
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=100.00 E-value=2.2e-102 Score=890.52 Aligned_cols=471 Identities=53% Similarity=0.851 Sum_probs=408.1
Q ss_pred EeeccCCCCCcCCCCceeeeecCCCCceEeeChHHhhccccccccccChhhHHHHHHhhhcccccCCCchhHHHHHHHHH
Q psy14622 6 LEQSWGSPKITKDDGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIA 85 (788)
Q Consensus 6 i~~~~~S~kiLGPkG~nkmI~~~~G~~~ITnDGvTIlk~I~l~d~~ehpgAkLl~e~A~~qd~evGDGTTTavVLA~aLL 85 (788)
+++.++|+ |||+||||||++++|+|+|||||+||+|+|++++||||++|||++++|++||+++||||||+||||++|+
T Consensus 23 la~~vktt--LGPkG~~kmi~~~~g~~~iTnDG~tIlk~i~~~hp~en~~Akll~e~a~~qd~e~GDGTTtvvVLA~~Ll 100 (545)
T 1iok_A 23 LADAVKVT--LGPKGRNVVIDKSFGAPRITKDGVSVAKEIELSDKFENMGAQMVREVASRTNDEAGDGTTTATVLAQAIV 100 (545)
T ss_dssp HHHHHGGG--CSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHGGGGCSTHHHHHHHHHHHHH
T ss_pred HHHHHHhc--CCCCCCeEEEECCCCCeEEeCCHHHHHHHhccCChhhHHHHHHHHHHHHhhccccCCCcchHHHHHHHHH
Confidence 34668888 9999999999999999999999999999999998888889999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHhccCCchHHhhHHHHHHHHhhhcccccccee
Q psy14622 86 KEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVTTPEEIAQVATISANGDKAVGELISDAMKRVSAKVEFQDALV 165 (788)
Q Consensus 86 ~eglklI~~Gi~P~~I~~Gi~~A~~~ile~L~~ls~~V~d~eeL~~VA~tSan~d~~Ig~LIadAv~kV~~~~e~~d~~I 165 (788)
+++++++++|+||+.|++||++|++.+++.|+++++|+++.++|.+||++|+++++.||+++++||.+
T Consensus 101 ~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~e~l~~va~iS~~~~~~i~~li~dAv~~------------ 168 (545)
T 1iok_A 101 REGLKAVAAGMNPMDLKRGIDVATAKVVEAIKSAARPVNDSSEVAQVGTISANGESFIGQQIAEAMQR------------ 168 (545)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCBCCCSTTTTTHHHHHTTTTCHHHHHHHHHHHHH------------
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHhhcCCchhHHHHHHHHHHH------------
Confidence 99999999999999999999999999999999999999988999999999999999999999999987
Q ss_pred eeccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhcccccccccccccccccCCCcccccccc
Q psy14622 166 LLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRFGPEVRGLMLQ 245 (788)
Q Consensus 166 Lite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~~~~~~~r~~~L~ 245 (788)
T Consensus 169 -------------------------------------------------------------------------------- 168 (545)
T 1iok_A 169 -------------------------------------------------------------------------------- 168 (545)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceeecccccccCcccccccccccccccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeeccccCCcceeeEee
Q psy14622 246 GVDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVV 325 (788)
Q Consensus 246 ~~~i~~~~~~~tp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 325 (788)
T Consensus 169 -------------------------------------------------------------------------------- 168 (545)
T 1iok_A 169 -------------------------------------------------------------------------------- 168 (545)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccccCCCCCchhhhhhhhhHHHHHHH
Q psy14622 326 GKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFIIELKLVLEYYIQT 405 (788)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (788)
T Consensus 169 -------------------------------------------------------------------------------- 168 (545)
T 1iok_A 169 -------------------------------------------------------------------------------- 168 (545)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhhccCCCCcEEEecCCccceeEEEEEeeEecccccccccccccCCceeEeccceeecccccccchhhhHHHHHHHH
Q psy14622 406 YIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESKISSIQSIIPALELAN 485 (788)
Q Consensus 406 ~~~~~~kvG~dGvItveeg~~~~~~lev~eG~~fd~GylSpyfvt~~e~~~v~l~~p~ILitD~kI~~i~~IlP~Le~~~ 485 (788)
||++|+|+|++|++++|++++++||.||+||+||||+|++++|..+++||+||++|.+|+++++++|+||.+.
T Consensus 169 -------V~~~g~I~Ve~G~~~~ds~~lveG~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~I~~~~~l~~~le~i~ 241 (545)
T 1iok_A 169 -------VGNEGVITVEENKGMETEVEVVEGMQFDRGYLSPYFVTNADKMIAELEDAYILLHEKKLSSLQPMVPLLESVI 241 (545)
T ss_dssp -------HCTTSCCCCEECSSSCCEEEEECCEECSCCCSCGGGCCCSSSSCEEEEEEEEEECSSCBCCCCC---------
T ss_pred -------hccCCeEEEEeCCccccceEEEecEEEecCccccccccCcccCceeecCCeEEEEcCCcCCHHHHHHHHHHHH
Confidence 5567788889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCeEEEecCCChhhHHhHHhhhcccccceeeecCCCCcchhhhhhhhhHhhhCCeEeccCCCCCcccccCcccccce
Q psy14622 486 SKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATLQDLAVATGGIVFGDEASPVKLEDLQATDLGSV 565 (788)
Q Consensus 486 ~~~rpLLIIAedi~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~~~LeDiAilTGg~vis~~~~g~~l~~v~~~~LG~a 565 (788)
+.++||||++++|+++||.+|+.|++||+++++|||+|+||++|++.|+|||++|||++++++ .|.+++++++++||+|
T Consensus 242 ~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~~~le~ia~~tGa~ii~~~-~~~~l~~~~~~~LG~a 320 (545)
T 1iok_A 242 QSQKPLLIVAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLQDIAILTGGQVISED-LGMKLENVTIDMLGRA 320 (545)
T ss_dssp --CCCCEEEESCBC-----------------CEEEECSCCTTHHHHHHHHHHHHHTC----------------CTTSEEE
T ss_pred hcCCCEEEECCCcCHHHHHHHHHccccccceeEEEecchhhhccHHHHHHHHHhcCCeeeccc-ccCCcccCCHHHcCcC
Confidence 999999999999999999999999999999999999999999999999999999999999998 7999999999999999
Q ss_pred eEEEEecCceEEEcCCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHhhcCCeEEEEecCCchhhHHHHHHHHHHHH
Q psy14622 566 GEIVITKDDTLILKGKGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSEVEVNEKKDRVTDAL 645 (788)
Q Consensus 566 ~~V~vt~d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~~~~~~L~eRla~LsggvAvI~VGG~Te~EikErk~r~edAl 645 (788)
++|++++++|++++|.++++++++|++||+.|++.++|+|||++|+||||||+|++++|.|||+|+.+++|++++++|||
T Consensus 321 ~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~~~~~tI~lrG~te~~l~E~kr~i~DAl 400 (545)
T 1iok_A 321 KKVSINKDNTTIVDGAGEKAEIEARVSQIRQQIEETTSDYDREKLQERVAKLAGGVAVIRVGGMTEIEVKERKDRVDDAL 400 (545)
T ss_dssp EEEEECSSCEEEESCCCCHHHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHTTSSCEEEEEECCSSHHHHHHHHHHHHHHH
T ss_pred cEEEEecCEEEEEeCCCCHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccccCCchhHhhHHHHhhhhhccCccccCCChhhHHHHHHHHHHHHHhhcChhHHHHHHHHHHHhccCeEE
Q psy14622 646 NATRAAVEEGIVPGGGTALLRCIAVLDKLETANADQATGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAV 725 (788)
Q Consensus 646 ~a~raA~e~GiVpGGG~all~as~~L~~~~~~~~~~~~G~~~~i~~r~~~l~~~~~~~~~~~d~~~l~eRla~Lsggvav 725 (788)
|++|+|+++|+|||||+++++++..|+++...+.+++.|
T Consensus 401 ~~~r~av~~giVpGGGa~e~~~s~~L~~~~~~~g~~q~~----------------------------------------- 439 (545)
T 1iok_A 401 NATRAAVQEGIVVGGGVALVQGAKVLEGLSGANSDQDAG----------------------------------------- 439 (545)
T ss_dssp HHHHHHHHHCEEETTTHHHHHHGGGGGSCCCSSHHHHHH-----------------------------------------
T ss_pred HHHHHHhhcCCCCCchHHHHHHHHHHHHHhccCchHHHH-----------------------------------------
Confidence 999999999999999999999999987654222222222
Q ss_pred EEecccHHHHHHHHhcchHHHHHHHhCCchHHHHHHHhcC-CCCeeEEcCCCcccchhhcCC
Q psy14622 726 LKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVLES-SGEMGYDAMNNEYVNMIQKVL 786 (788)
Q Consensus 726 i~vGa~~~e~~e~~~r~~~a~~a~~Aa~e~g~Vv~~~~~~-~~~~Gyda~~~~~~dm~~~Gi 786 (788)
++...++++.+.+++|.|||+++..|+.++++. +.++|||+.+|+|+||+++||
T Consensus 440 -------i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~~~~~~G~d~~~g~~~dm~~~gI 494 (545)
T 1iok_A 440 -------IAIIRRALEAPMRQIAENAGVDGAVVAGKVRESSDKAFGFNAQTEEYGDMFKFGV 494 (545)
T ss_dssp -------HHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHSCCSTTEEEETTTTEEEEHHHHTC
T ss_pred -------HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhcCCCeeEeCCCCcccchHhcCc
Confidence 899999999999999999999999999999876 567999999999999999997
No 4
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=100.00 E-value=2.8e-101 Score=881.46 Aligned_cols=470 Identities=52% Similarity=0.832 Sum_probs=449.8
Q ss_pred EeeccCCCCCcCCCCceeeeecCCCCceEeeChHHhhccccccccccChhhHHHHHHhhhcccccCCCchhHHHHHHHHH
Q psy14622 6 LEQSWGSPKITKDDGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIA 85 (788)
Q Consensus 6 i~~~~~S~kiLGPkG~nkmI~~~~G~~~ITnDGvTIlk~I~l~d~~ehpgAkLl~e~A~~qd~evGDGTTTavVLA~aLL 85 (788)
+++.++|+ |||+||||||++++|+|+|||||+||+|+|++++||||++|||++++|++||+++||||||+||||++|+
T Consensus 22 la~~vktt--LGPkG~~kmi~~~~g~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~~qd~e~GDGTTtvvVLA~~LL 99 (543)
T 1we3_A 22 VANAVKVT--LGPRGRNVVLEKKFGSPTITKDGVTVAKEVELEDHLENIGAQLLKEVASKTNDVAGDGTTTATVLAQAIV 99 (543)
T ss_dssp HHHHHGGG--CSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHH
T ss_pred HHHHHHhc--cCCCCCeEEEECCCCCeEEEcCHHHHHHHcccCChHHhHHHHHHHHHHHhhheecCCCcchHHHHHHHHH
Confidence 34568888 9999999999999999999999999999999997777779999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHhccCCchHHhhHHHHHHHHhhhcccccccee
Q psy14622 86 KEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVTTPEEIAQVATISANGDKAVGELISDAMKRVSAKVEFQDALV 165 (788)
Q Consensus 86 ~eglklI~~Gi~P~~I~~Gi~~A~~~ile~L~~ls~~V~d~eeL~~VA~tSan~d~~Ig~LIadAv~kV~~~~e~~d~~I 165 (788)
+++++++++|+||+.|++||++|++.+++.|+++++|+++.++|.+||++|++ ++.||+++++||.+
T Consensus 100 ~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~l~~vA~iS~~-~~~i~~li~dAv~~------------ 166 (543)
T 1we3_A 100 REGLKNVAAGANPLALKRGIEKAVEAAVEKIKALAIPVEDRKAIEEVATISAN-DPEVGKLIADAMEK------------ 166 (543)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCCSHHHHHHHHHHHHT-CHHHHHHHHHHHHT------------
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHhhhhhcC-CHHHHHHHHHHHHH------------
Confidence 99999999999999999999999999999999999999999999999999998 88999999999986
Q ss_pred eeccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhcccccccccccccccccCCCcccccccc
Q psy14622 166 LLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRFGPEVRGLMLQ 245 (788)
Q Consensus 166 Lite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~~~~~~~r~~~L~ 245 (788)
T Consensus 167 -------------------------------------------------------------------------------- 166 (543)
T 1we3_A 167 -------------------------------------------------------------------------------- 166 (543)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceeecccccccCcccccccccccccccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeeccccCCcceeeEee
Q psy14622 246 GVDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVV 325 (788)
Q Consensus 246 ~~~i~~~~~~~tp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 325 (788)
T Consensus 167 -------------------------------------------------------------------------------- 166 (543)
T 1we3_A 167 -------------------------------------------------------------------------------- 166 (543)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccccCCCCCchhhhhhhhhHHHHHHH
Q psy14622 326 GKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFIIELKLVLEYYIQT 405 (788)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (788)
T Consensus 167 -------------------------------------------------------------------------------- 166 (543)
T 1we3_A 167 -------------------------------------------------------------------------------- 166 (543)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhhccCCCCcEEEecCCccceeEEEEEeeEecccccccccccccCCceeEeccceeecccccccchhhhHHHHHHHH
Q psy14622 406 YIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESKISSIQSIIPALELAN 485 (788)
Q Consensus 406 ~~~~~~kvG~dGvItveeg~~~~~~lev~eG~~fd~GylSpyfvt~~e~~~v~l~~p~ILitD~kI~~i~~IlP~Le~~~ 485 (788)
||++|+|+|++|++++|++++++||.||+||+||||+|++++|..+++||+||++|.+|+++++++|+||.+.
T Consensus 167 -------V~~~g~I~Ve~G~~~~ds~~lv~G~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~Is~~~~l~~~le~i~ 239 (543)
T 1we3_A 167 -------VGKEGIITVEESKSLETELKFVEGYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVSNVRELLPILEQVA 239 (543)
T ss_dssp -------TCTTSEEEEEECSSSSCEEEEECSEEESCCBSSGGGCSBTTTTBCCEEEEEEEEESSCBCCHHHHHHHHHHHH
T ss_pred -------hCcCCcEEEecCCccccceEEEcCEEEecCccccccccCcccCceeecCceEEEECCCcCCHHHHHHHHHHHH
Confidence 6668889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCeEEEecCCChhhHHhHHhhhcccccceeeecCCCCcchhhhhhhhhHhhhCCeEeccCCCCCcccccCcccccce
Q psy14622 486 SKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATLQDLAVATGGIVFGDEASPVKLEDLQATDLGSV 565 (788)
Q Consensus 486 ~~~rpLLIIAedi~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~~~LeDiAilTGg~vis~~~~g~~l~~v~~~~LG~a 565 (788)
+.++||||++++|+++||++|+.|++||+++++|||+|+||++|++.|+|||++|||++++++ .|.+++++++++||+|
T Consensus 240 ~~g~~lvii~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~~~~le~ia~~tGa~ii~~~-~g~~l~~~~~~~LG~a 318 (543)
T 1we3_A 240 QTGKPLLIIAEDVEGEALATLVVNKLRGTLSVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEE-LGFKLENATLSMLGRA 318 (543)
T ss_dssp TTTCCEEEEESCBCHHHHHHHHHHHHHTSCCEEEEECSSSHHHHHHHHHHHHHHHCCCCBCTT-TTCCGGGCCGGGCEEE
T ss_pred hcCCCEEEEcCCccHHHHHHHHHhccccceeEEEEeccchhhhhHHHHHHHHHHhCCceeecc-ccCCcccCCHHHCCCc
Confidence 999999999999999999999999999999999999999999999999999999999999998 8999999999999999
Q ss_pred eEEEEecCceEEEcCCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHhhcCCeEEEEecCCchhhHHHHHHHHHHHH
Q psy14622 566 GEIVITKDDTLILKGKGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSEVEVNEKKDRVTDAL 645 (788)
Q Consensus 566 ~~V~vt~d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~~~~~~L~eRla~LsggvAvI~VGG~Te~EikErk~r~edAl 645 (788)
++|++++++|++++|.+++++++.|++||+.|++.++|+|||++|+||||||+|++++|.|||+|+.+++|++++++|||
T Consensus 319 ~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~e~l~erlakl~~~~~tI~lrG~te~~l~E~~r~i~DAl 398 (543)
T 1we3_A 319 ERVRITKDETTIVGGKGKKEDIEARINGIKKELETTDSEYAREKLQERLAKLAGGVAVIRVGAATETELKEKKHRFEDAL 398 (543)
T ss_dssp EEEEECSSCEEEEEECCCHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHTTCEEEEEECCSSHHHHHHHHHHHHHHH
T ss_pred eEEEEEcCEEEEEcCCCCHHHHHHHHHHHHHHhhccCchhHHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccccCCchhHhhHHHHhhhhhcc-CccccCCChhhHHHHHHHHHHHHHhhcChhHHHHHHHHHHHhccCeE
Q psy14622 646 NATRAAVEEGIVPGGGTALLRCIAVLDKLETA-NADQATGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVA 724 (788)
Q Consensus 646 ~a~raA~e~GiVpGGG~all~as~~L~~~~~~-~~~~~~G~~~~i~~r~~~l~~~~~~~~~~~d~~~l~eRla~Lsggva 724 (788)
|++|+|+++|+|||||+++++++..|+++... +.+++.|
T Consensus 399 ~~~r~av~~giVpGGGa~e~~~s~~L~~~~~~~~g~~q~~---------------------------------------- 438 (543)
T 1we3_A 399 NATRAAVEEGIVPGGGVTLLRAISAVEELIKKLEGDEATG---------------------------------------- 438 (543)
T ss_dssp HHHHHHHHHCEEETTTHHHHHHHHHHHHHHTTCCHHHHHH----------------------------------------
T ss_pred HHHHHHhccCcCCCccHHHHHHHHHHHHHhhccCchHHHH----------------------------------------
Confidence 99999999999999999999999999876431 2233333
Q ss_pred EEEecccHHHHHHHHhcchHHHHHHHhCCchHHHHHHHhc--CCCCeeEEcCCCcccchhhcCC
Q psy14622 725 VLKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVLE--SSGEMGYDAMNNEYVNMIQKVL 786 (788)
Q Consensus 725 vi~vGa~~~e~~e~~~r~~~a~~a~~Aa~e~g~Vv~~~~~--~~~~~Gyda~~~~~~dm~~~Gi 786 (788)
++...++++.+.+++|.|||+++..|+.++++ .+.++|||+.+|+|+||+++||
T Consensus 439 --------i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~G~d~~~g~~~dm~~~gI 494 (543)
T 1we3_A 439 --------AKIVRRALEEPARQIAENAGYEGSVIVQQILAETKNPRYGFNAATGEFVDMVEAGI 494 (543)
T ss_dssp --------HHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHHCCSCTTEEEETTTTEEEETTTTTC
T ss_pred --------HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHhcCCCCEEEeCCCCeecccccCCc
Confidence 89999999999999999999999999999987 4567999999999999999997
No 5
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=100.00 E-value=5.2e-80 Score=711.07 Aligned_cols=453 Identities=21% Similarity=0.271 Sum_probs=358.6
Q ss_pred EeeccCCCCCcCCCCceeeeecCCCCceEeeChHHhhccccccccccChhhHHHHHHhhhcccccCCCchhHHHHHHHHH
Q psy14622 6 LEQSWGSPKITKDDGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIA 85 (788)
Q Consensus 6 i~~~~~S~kiLGPkG~nkmI~~~~G~~~ITnDGvTIlk~I~l~d~~ehpgAkLl~e~A~~qd~evGDGTTTavVLA~aLL 85 (788)
+++.++|+ |||+||||||++++|+|+|||||+||+|+|+++ ||+|||++++|++||+++||||||+||||++|+
T Consensus 31 la~~vktt--LGPkG~~kml~~~~G~~~ITnDG~TIlk~i~~~----hP~Akll~e~a~~qd~e~GDGTTtvvVLA~eLL 104 (590)
T 3p9d_C 31 VADVIRTC--LGPKAMLKMLLDPMGGLVLTNDGHAILREIDVA----HPAAKSMLELSRTQDEEVGDGTTTVIILAGEIL 104 (590)
T ss_dssp HHHHSTTT--CSSSCCCCEEECTTTCCBCCCCHHHHHHHSCCC----CHHHHTHHHHTTTHHHHCSSCHHHHHHHHHHHH
T ss_pred HHHHHHhc--cCCCCCeEEEECCCCCeEEECCHHHHHHHhhCC----CHHHHHHHHHHHhhhhhhCCCccchHHHHHHHH
Confidence 35678899 999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred HHHHHH-HhcCCCchhHHHHHHHHHHHHHHHHHhcCCCCC--CHHHHHHHHHhccCC------chHHhhHHHHHHHHhhh
Q psy14622 86 KEGFEK-ISKGANPIEIRRGVMLAVETIKTHLKELSKPVT--TPEEIAQVATISANG------DKAVGELISDAMKRVSA 156 (788)
Q Consensus 86 ~eglkl-I~~Gi~P~~I~~Gi~~A~~~ile~L~~ls~~V~--d~eeL~~VA~tSan~------d~~Ig~LIadAv~kV~~ 156 (788)
++|+++ +++|+||+.|++||++|++.+++.|+++++|++ +.++|.+||+||+++ ++.||+++++||.+++
T Consensus 105 ~~a~~l~l~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~e~L~~vA~tslsSK~~~~~~~~i~~livdAv~~V~- 183 (590)
T 3p9d_C 105 AQCAPYLIEKNIHPVIIIQALKKALTDALEVIKQVSKPVDVENDAAMKKLIQASIGTKYVIHWSEKMCELALDAVKTVR- 183 (590)
T ss_dssp HHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHCCTTTTCCTHHHHHHHTTTSTTSTTGGGHHHHHHHHHHHHTTST-
T ss_pred hhhHHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHhhccccCCHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHhc-
Confidence 999999 999999999999999999999999999999987 478999999999876 4789999999998741
Q ss_pred ccccccceeeeccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhcccccccccccccccccCC
Q psy14622 157 KVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRFG 236 (788)
Q Consensus 157 ~~e~~d~~ILite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~~~~ 236 (788)
T Consensus 184 -------------------------------------------------------------------------------- 183 (590)
T 3p9d_C 184 -------------------------------------------------------------------------------- 183 (590)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CccccccccceeecccccccCcccccccccccccccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeeccccC
Q psy14622 237 PEVRGLMLQGVDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVD 316 (788)
Q Consensus 237 ~~~r~~~L~~~~i~~~~~~~tp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 316 (788)
T Consensus 184 -------------------------------------------------------------------------------- 183 (590)
T 3p9d_C 184 -------------------------------------------------------------------------------- 183 (590)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcceeeEeeecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccccCCCCCchhhhhhh
Q psy14622 317 GEALSTLVVGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFIIELK 396 (788)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (788)
.+|++++++++...
T Consensus 184 -----------------------------------------~~~~~~~~~~~~~~------------------------- 197 (590)
T 3p9d_C 184 -----------------------------------------KDLGQTVEGEPNFE------------------------- 197 (590)
T ss_dssp -----------------------------------------TCC------------------------------------
T ss_pred -----------------------------------------ccccCccccccccc-------------------------
Confidence 11112111110000
Q ss_pred hhHHHHHHHHHHhhhccCCCCcEEEe--cCCccceeEEEEEeeEecccccccccccccCCceeEeccceeecccc-----
Q psy14622 397 LVLEYYIQTYIYLCLKVGKEGVITVK--DGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSES----- 469 (788)
Q Consensus 397 ~~~~~~~~~~~~~~~kvG~dGvItve--eg~~~~~~lev~eG~~fd~GylSpyfvt~~e~~~v~l~~p~ILitD~----- 469 (788)
+-.+-.|.|+ .|.+..+ .++++||.||+|+.+| +|..+++||+||++|.
T Consensus 198 ----------------vDl~~~I~I~ki~Ggs~~d-s~lv~Gmvfdk~~~~~-------~m~~~~en~kIll~d~~Le~~ 253 (590)
T 3p9d_C 198 ----------------IDIKRYVRVEKIPGGDVLD-SRVLKGVLLNKDVVHP-------KMSRHIENPRVVLLDCPLEYK 253 (590)
T ss_dssp ----------------CCCSSSSCEEEESSCCGGG-CBCCSSEEECCCCSCT-------TSCSCEESCCEECCCCCCSCC
T ss_pred ----------------cchhhceEEEEecCCCccc-ceeeeEEEEecccCCC-------CCcceeeeeEEEEEccccccc
Confidence 0001112222 2445544 5889999999996544 5777899999999999
Q ss_pred c--------ccchhhhHHHHH-----------HHHhcCCCeEEEecC-CChhhHHhHHhhhcccccceeeecCCCCcchh
Q psy14622 470 K--------ISSIQSIIPALE-----------LANSKRKPLVILAED-VDGEALSTLVVNRLKIGLQVAAVKAPGFGDNR 529 (788)
Q Consensus 470 k--------I~~i~~IlP~Le-----------~~~~~~rpLLIIAed-i~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R 529 (788)
| |++++++.|+++ .+.+. +|+||||++ |+++||.+|+.|++ +.||+.|
T Consensus 254 K~e~~~~v~Is~~~~l~~il~~E~~~l~~~vekI~~~-g~~vII~e~~I~d~Al~~L~k~~I-----------~av~~~~ 321 (590)
T 3p9d_C 254 KGESQTNIEIEKEEDWNRILQIEEEQVQLMCEQILAV-RPTLVITEKGVSDLAQHYLLKGGC-----------SVLRRVK 321 (590)
T ss_dssp CCTTTEECCBCSTTHHHHHHHHHHHHHHHHHHHHHTT-CCSEECCSSCCCTHHHHHHHHTTC-----------CCCCCCC
T ss_pred ccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhc-CCcEEEecCCcCHHHHHHHHhccc-----------eeeccCC
Confidence 4 456788888873 55555 599999987 99999999998742 4578899
Q ss_pred hhhhhhhHhhhCCeEeccCCCCCcccccCcccccc-eeEEE---EecCceEEEcCCCCHHH-------------------
Q psy14622 530 KATLQDLAVATGGIVFGDEASPVKLEDLQATDLGS-VGEIV---ITKDDTLILKGKGKKED------------------- 586 (788)
Q Consensus 530 ~~~LeDiAilTGg~vis~~~~g~~l~~v~~~~LG~-a~~V~---vt~d~Ttii~g~g~~~~------------------- 586 (788)
+..|+|||++|||++++ +++++++++||+ |++|. +++++|+++.|.++++.
T Consensus 322 k~~le~ia~~TGa~iis------~l~~~~~~~LG~~a~~v~~~~ig~d~~~~i~g~~~~~~~~~~~~~~~~~~~~k~~~~ 395 (590)
T 3p9d_C 322 KSDNNRIARVTGATIVN------RVEDLKESDVGTNCGLFKVEMIGDEYFSFLDNCKEPGSGSGWSHPQFEKGSGKRRWK 395 (590)
T ss_dssp HHHHHHHHHHHTCCCCS------CSTTCCTTSCBCCCSEEECCEETTEECEEECC-------------------------
T ss_pred HHHHHHHHHHhCCceee------cccCCCHHHhCCcCCEEEEEEEcCcEEEEEeCCCCccccccccccccccccchhhhh
Confidence 99999999999999997 468899999999 99995 78899999999999888
Q ss_pred -------HHHHHHHHHHHHHhcCChHHHHHHHHHHHhhcCCeEEEEecCCchhhHHHHHHHHHHHHHHHHHHHHh-cccc
Q psy14622 587 -------IDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSEVEVNEKKDRVTDALNATRAAVEE-GIVP 658 (788)
Q Consensus 587 -------I~~R~~~l~~~~~~~~s~~~~~~L~eRla~LsggvAvI~VGG~Te~EikErk~r~edAl~a~raA~e~-GiVp 658 (788)
|++|++||+.|++.++|+||++ +++|+||+++|.|||+|+.+++|++++++|||||+|+|+++ |+||
T Consensus 396 ~~~~~~~i~~r~~~i~~~~~~~~~~~~~~-----~~~l~ggv~tI~lrg~te~~l~E~kr~i~DAl~a~r~av~~~~iVp 470 (590)
T 3p9d_C 396 KNFIAVSAANRFKKISSSGALGSGHHHHH-----HHHGSGKACTIMLRGGSKDILNEIDRNLQDAMAVARNVMLSPSLSP 470 (590)
T ss_dssp -------------------------------------CCCSCCCEEEECSSTTTHHHHHHHHHHHHHHHHHHHHCCCEEC
T ss_pred cchhhHHHHHHHHHHHHHHhccCCHHHHH-----HHhhcCCeeEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCEEe
Confidence 9999999999999999999966 58999999999999999999999999999999999999999 7999
Q ss_pred CCchhHhhHHHHhhhhh-ccCccccCCChhhHHHHHHHHHHHHHhhcChhHHHHHHHHHHHhccCeEEEEecccHHHHHH
Q psy14622 659 GGGTALLRCIAVLDKLE-TANADQATGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSVEIVK 737 (788)
Q Consensus 659 GGG~all~as~~L~~~~-~~~~~~~~G~~~~i~~r~~~l~~~~~~~~~~~d~~~l~eRla~Lsggvavi~vGa~~~e~~e 737 (788)
|||+++++++..|+.+. +.+.+++.| ++...
T Consensus 471 GGGa~e~~~s~~L~~~~~~~~g~eq~~------------------------------------------------i~~~a 502 (590)
T 3p9d_C 471 GGGATEMAVSVKLAEKAKQLEGIQQWP------------------------------------------------YQAVA 502 (590)
T ss_dssp TTTHHHHHHHHHHHHHHHHSCSTTHHH------------------------------------------------HHHHH
T ss_pred CccHHHHHHHHHHHHHhhcCChHHHHH------------------------------------------------HHHHH
Confidence 99999999999998753 334444444 89999
Q ss_pred HHhcchHHHHHHHhCCchHHHHHHHhcC----CCCeeEEcCCCcccchhhcCC
Q psy14622 738 KALRQPCMTIATNAGVDASVVVNKVLES----SGEMGYDAMNNEYVNMIQKVL 786 (788)
Q Consensus 738 ~~~r~~~a~~a~~Aa~e~g~Vv~~~~~~----~~~~Gyda~~~~~~dm~~~Gi 786 (788)
++++.|.+++|.|||+++..|+.++++. +..+|||+.+|+|+||+++||
T Consensus 503 ~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI 555 (590)
T 3p9d_C 503 DAMECIPRTLIQNAGGDPIRLLSQLRAKHAQGNFTTGIDGDKGKIVDMVSYGI 555 (590)
T ss_dssp HHTTHHHHHHHHTTCSCHHHHHHHHHHHHTTSCTTCBCCTTSSSCBCTTTTTC
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCEeEeCCCCeEeehHHcCC
Confidence 9999999999999999999999999762 346899999999999999997
No 6
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=9.3e-75 Score=659.41 Aligned_cols=428 Identities=22% Similarity=0.334 Sum_probs=362.8
Q ss_pred EeeccCCCCCcCCCCceeeeecCCCCceEeeChHHhhccccccccccChhhHHHHHHhhhcccccCCCchhHHHHHHHHH
Q psy14622 6 LEQSWGSPKITKDDGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIA 85 (788)
Q Consensus 6 i~~~~~S~kiLGPkG~nkmI~~~~G~~~ITnDGvTIlk~I~l~d~~ehpgAkLl~e~A~~qd~evGDGTTTavVLA~aLL 85 (788)
+++.++|+ |||+||||||++++|+|+|||||+||+++|+++ ||+|||++++|++||+++||||||+||||++|+
T Consensus 22 la~~vktt--LGPkG~~kml~~~~g~~~iTnDG~tIlk~i~~~----hP~Akll~~~a~~qd~~~GDGTTtvvVLA~~Ll 95 (515)
T 3iyg_E 22 VANTMKTS--LGPNGLDKMMVDKDGDVTVTNDGATILSMMDVD----HQIAKLMVELSKSQDDEIGDGTTGVVVLAGALL 95 (515)
T ss_pred HHHHHhhc--cCCCCCeEEEEcCCCCeEEeCcHHHHHHHcccC----CHHHHHHHHHHHHhhhhhCCchhHHHHHHHHHH
Confidence 35678899 999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhcCCCCCC----HHHHHHHHHhccCCchHHhhHHHHHHHHhhhccccc
Q psy14622 86 KEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVTT----PEEIAQVATISANGDKAVGELISDAMKRVSAKVEFQ 161 (788)
Q Consensus 86 ~eglklI~~Gi~P~~I~~Gi~~A~~~ile~L~~ls~~V~d----~eeL~~VA~tSan~d~~Ig~LIadAv~kV~~~~e~~ 161 (788)
++|++++++|+||+.|++||++|++.+++.|+++++|++. .++|.+||++|++++ .+|. ++++|.++.
T Consensus 96 ~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~l~~vA~tsl~sK-~i~~-~~~~l~~l~------ 167 (515)
T 3iyg_E 96 EEAEQLLDRGIHPIRIADGYEQAARIAIEHLDKISDSVLVDMKNTEPLIQTAKTTLGSK-VVNS-CHRQMAEIA------ 167 (515)
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhceecCCCccCHHHHHHHHHHHhccc-chhH-HHHHHHHHH------
Confidence 9999999999999999999999999999999999998753 689999999999975 2332 344444410
Q ss_pred cceeeeccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhcccccccccccccccccCCCcccc
Q psy14622 162 DALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRFGPEVRG 241 (788)
Q Consensus 162 d~~ILite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~~~~~~~r~ 241 (788)
T Consensus 168 -------------------------------------------------------------------------------- 167 (515)
T 3iyg_E 168 -------------------------------------------------------------------------------- 167 (515)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccceeecccccccCcccccccccccccccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeeccccCCccee
Q psy14622 242 LMLQGVDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALS 321 (788)
Q Consensus 242 ~~L~~~~i~~~~~~~tp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 321 (788)
T Consensus 168 -------------------------------------------------------------------------------- 167 (515)
T 3iyg_E 168 -------------------------------------------------------------------------------- 167 (515)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eEeeecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccccCCCCCchhhhhhhhhHHH
Q psy14622 322 TLVVGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFIIELKLVLEY 401 (788)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (788)
.|+++++++++. +
T Consensus 168 ------------------------------------~dav~~V~~~~~---------------~---------------- 180 (515)
T 3iyg_E 168 ------------------------------------VNAVLTVADMQR---------------R---------------- 180 (515)
T ss_pred ------------------------------------HHHHHhhccccc---------------C----------------
Confidence 011111100000 0
Q ss_pred HHHHHHHhhhccCCCCcEEEec--CCccceeEEEEEeeEecccccccccccccCC-ceeEeccceeec-----ccccccc
Q psy14622 402 YIQTYIYLCLKVGKEGVITVKD--GKTLTDELEVIEGMKFDRGYISPYFINTAKG-AKVEFQDALVLL-----SESKISS 473 (788)
Q Consensus 402 ~~~~~~~~~~kvG~dGvItvee--g~~~~~~lev~eG~~fd~GylSpyfvt~~e~-~~v~l~~p~ILi-----tD~kI~~ 473 (788)
.+. -+.|.++. |.++.+ .++++||.||+||.||||+++.++ +.+.|+.||.+. ++.+|++
T Consensus 181 ----------~~d-~~~I~I~k~~Ggs~~d-s~lv~G~~~dk~~~~~~m~~~~~~~kIall~~~le~~k~~~~~~~~is~ 248 (515)
T 3iyg_E 181 ----------DVD-FELIKVEGKVGGRLED-TKLIKGVIVDKDFSHPQMPKQVEDAKIAILTCPFEPPKPKTKHKLDVTS 248 (515)
T ss_pred ----------CCC-cccEEEEEecCCCccc-ceEEeeEEEecccccccccccCCCceEEEEcCccccccccccceeeeCC
Confidence 000 12344433 555554 589999999999999999999886 777889999988 7888999
Q ss_pred hhhh-----------HHHHHHHHhcCCCeEEEecCCChhhHHhHHhhhcccccceeeecCCCCcchhhhhhhhhHhhhCC
Q psy14622 474 IQSI-----------IPALELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATLQDLAVATGG 542 (788)
Q Consensus 474 i~~I-----------lP~Le~~~~~~rpLLIIAedi~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~~~LeDiAilTGg 542 (788)
++++ .|+++.+.+.+.||||++++|+++||++|+.|++++.+++ ++..|+|||.+|||
T Consensus 249 ~~~l~~~~~~E~~~l~~~lekI~~~g~~vvi~~~~I~~~al~~L~~~~I~~v~~v-----------~k~~le~ia~~tGa 317 (515)
T 3iyg_E 249 VEDFKALQKYEKEKFEEMIRQIKETGANLAVCQWGFDDEANHLLLQNDLPAVRWV-----------GGPEIELIAIATGG 317 (515)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCCCHHHHHHHHHCCCEEEecc-----------CHHHHHHHHHHhCC
Confidence 9886 7899999999999999999999999999999988755544 37789999999999
Q ss_pred eEeccCCCCCcccccCcccccceeEEEE-----ecCceEEEcCCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHhh
Q psy14622 543 IVFGDEASPVKLEDLQATDLGSVGEIVI-----TKDDTLILKGKGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARL 617 (788)
Q Consensus 543 ~vis~~~~g~~l~~v~~~~LG~a~~V~v-----t~d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~~~~~~L~eRla~L 617 (788)
++++ +++++++++||+|++|.+ ++++++++.|.+++
T Consensus 318 ~ii~------~l~~l~~~~LG~a~~v~~~~ig~~k~~~~~~~g~~~~--------------------------------- 358 (515)
T 3iyg_E 318 RIVP------RFSELTAEKLGFAGLVKEISFGTTKDKMLVIEQCKNS--------------------------------- 358 (515)
T ss_pred EEec------ccccCCHHHCCcceEEEEEEeccccceEEEEEcCCCC---------------------------------
Confidence 9997 468889999999999988 77999999987663
Q ss_pred cCCeEEEEecCCchhhHHHHHHHHHHHHHHHHHHHHhc-cccCCchhHhhHHHHhhhhhcc-CccccCCChhhHHHHHHH
Q psy14622 618 ASGVAVLKVGGSSEVEVNEKKDRVTDALNATRAAVEEG-IVPGGGTALLRCIAVLDKLETA-NADQATGKKEDIDRRADQ 695 (788)
Q Consensus 618 sggvAvI~VGG~Te~EikErk~r~edAl~a~raA~e~G-iVpGGG~all~as~~L~~~~~~-~~~~~~G~~~~i~~r~~~ 695 (788)
..++|.+||+|+.+++|++++++||||++|+|+++| +|||||+++++++..|+++... +.+++.|
T Consensus 359 --~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~----------- 425 (515)
T 3iyg_E 359 --RAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADKCPTLEQYA----------- 425 (515)
T ss_pred --ceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHHHhccCCcHHHHH-----------
Confidence 247899999999999999999999999999999999 9999999999999999875422 2233333
Q ss_pred HHHHHHhhcChhHHHHHHHHHHHhccCeEEEEecccHHHHHHHHhcchHHHHHHHhCCchHHHHHHHhc-----CCCCee
Q psy14622 696 IRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVLE-----SSGEMG 770 (788)
Q Consensus 696 l~~~~~~~~~~~d~~~l~eRla~Lsggvavi~vGa~~~e~~e~~~r~~~a~~a~~Aa~e~g~Vv~~~~~-----~~~~~G 770 (788)
++...++++.+.+++|.|||+++..|+.++++ ....+|
T Consensus 426 -------------------------------------i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G 468 (515)
T 3iyg_E 426 -------------------------------------MRAFADALEVIPMALAENSGMNPIQTMTEVRARQVKEVNPALG 468 (515)
T ss_pred -------------------------------------HHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCCCeee
Confidence 89999999999999999999999999999975 235689
Q ss_pred EEcCCCcccchhhcCC
Q psy14622 771 YDAMNNEYVNMIQKVL 786 (788)
Q Consensus 771 yda~~~~~~dm~~~Gi 786 (788)
||+.+|+|+||+++||
T Consensus 469 ~d~~~g~~~d~~~~gI 484 (515)
T 3iyg_E 469 IDCLHKGTNDMKHQHV 484 (515)
T ss_pred EecCCCcccchHhccC
Confidence 9999999999999997
No 7
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=100.00 E-value=1.5e-75 Score=671.47 Aligned_cols=423 Identities=22% Similarity=0.345 Sum_probs=369.0
Q ss_pred EeeccCCCCCcCCCCceeeeecCCCCceEeeChHHhhccccccccccChhhHHHHHHhhhcccccCCCchhHHHHHHHHH
Q psy14622 6 LEQSWGSPKITKDDGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIA 85 (788)
Q Consensus 6 i~~~~~S~kiLGPkG~nkmI~~~~G~~~ITnDGvTIlk~I~l~d~~ehpgAkLl~e~A~~qd~evGDGTTTavVLA~aLL 85 (788)
+++.++|+ |||+||||||++++|+|+|||||+||+++|+++ ||+|||++++|++||+++||||||+||||++|+
T Consensus 36 la~~vktt--LGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~----hP~Akll~e~a~~qd~e~GDGTTtvvVLA~~LL 109 (559)
T 3p9d_A 36 VANVVKSS--LGPVGLDKMLVDDIGDFTVTNDGATILSLLDVQ----HPAGKILVELAQQQDREIGDGTTSVVIIASELL 109 (559)
T ss_dssp HHHHTTTT--SSTTCCEEEECCSSSCCCEECCHHHHHHHHCCC----SHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHH
T ss_pred HHHHHHhc--cCCCCCeeEeEcCCCCEEEECCHHHHHHHhcCC----CHHHHHHHHHHHHHHHHcCCCcchHHHHHHHHH
Confidence 35678999 999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHh-cCCCCCC--HHHHHHHHHhccCC------chHHhhHHHHHHHHhhh
Q psy14622 86 KEGFEKISKGANPIEIRRGVMLAVETIKTHLKE-LSKPVTT--PEEIAQVATISANG------DKAVGELISDAMKRVSA 156 (788)
Q Consensus 86 ~eglklI~~Gi~P~~I~~Gi~~A~~~ile~L~~-ls~~V~d--~eeL~~VA~tSan~------d~~Ig~LIadAv~kV~~ 156 (788)
++|++++++|+||+.|++||++|++.+++.|++ +++|++. .++|.+||++|+++ +++||+++++||.++++
T Consensus 110 ~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~~~e~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~ 189 (559)
T 3p9d_A 110 KRANELVKNKIHPTTIITGFRVALREAIRFINEVLSTSVDTLGKETLINIAKTSMSSKIIGADSDFFSNMVVDALLAVKT 189 (559)
T ss_dssp HHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHTGGGSCC--CTTHHHHHHHTTSSSGGGTTHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHhccCcccchhHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999 9999874 78999999999998 57899999999998421
Q ss_pred ccccccceeeeccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhcccccccccccccccccCC
Q psy14622 157 KVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRFG 236 (788)
Q Consensus 157 ~~e~~d~~ILite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~~~~ 236 (788)
+ ++. +
T Consensus 190 ~--------------------------------------------------------------------------~~~-~ 194 (559)
T 3p9d_A 190 Q--------------------------------------------------------------------------NSK-G 194 (559)
T ss_dssp E--------------------------------------------------------------------------ESS-S
T ss_pred c--------------------------------------------------------------------------ccC-C
Confidence 0 000 0
Q ss_pred CccccccccceeecccccccCcccccccccccccccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeeccccC
Q psy14622 237 PEVRGLMLQGVDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVD 316 (788)
Q Consensus 237 ~~~r~~~L~~~~i~~~~~~~tp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 316 (788)
T Consensus 195 -------------------------------------------------------------------------------- 194 (559)
T 3p9d_A 195 -------------------------------------------------------------------------------- 194 (559)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CcceeeEeeecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccccCCCCCchhhhhhh
Q psy14622 317 GEALSTLVVGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFIIELK 396 (788)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (788)
+|+|++
T Consensus 195 ------------------------------------------~~~i~l-------------------------------- 200 (559)
T 3p9d_A 195 ------------------------------------------EIKYPV-------------------------------- 200 (559)
T ss_dssp ------------------------------------------CEECCT--------------------------------
T ss_pred ------------------------------------------CCccch--------------------------------
Confidence 000000
Q ss_pred hhHHHHHHHHHHhhhccCCCCcEEEec--CCccceeEEEEEeeEecccccccccccccCCceeEec--cceeecccccc-
Q psy14622 397 LVLEYYIQTYIYLCLKVGKEGVITVKD--GKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQ--DALVLLSESKI- 471 (788)
Q Consensus 397 ~~~~~~~~~~~~~~~kvG~dGvItvee--g~~~~~~lev~eG~~fd~GylSpyfvt~~e~~~v~l~--~p~ILitD~kI- 471 (788)
+ -|.|++ |.++++ .++++||.||+||.||||++ .++ ||+||++|.+|
T Consensus 201 -------------------~-~I~I~k~~Ggs~~d-s~lv~G~v~dk~~~~~~m~~-------~ie~~n~kIll~~~~Le 252 (559)
T 3p9d_A 201 -------------------K-AVNVLKAHGKSATE-SLLVPGYALNCTVASQAMPK-------RIAGGNVKIACLDLNLQ 252 (559)
T ss_dssp -------------------T-CCCEEEEESSCSSC-CBCCSEECCCCCCSSTTSCS-------EECSSSBCEEEETTCCS
T ss_pred -------------------h-HeEEEEecCCCccc-eeEeccEEEeecccCCCcce-------eeccCCceEEEEecccc
Confidence 0 022332 666665 58999999999999999863 566 99999999997
Q ss_pred ------------cchhh-----------hHHHHHHHHhcCCCeEEEecCCChhhHHhHHhhhcccccceeeecCCCCcch
Q psy14622 472 ------------SSIQS-----------IIPALELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDN 528 (788)
Q Consensus 472 ------------~~i~~-----------IlP~Le~~~~~~rpLLIIAedi~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~ 528 (788)
+++++ +.|+++.+.+.+.||||++++|+++||.+|+.|++ +|| ++.
T Consensus 253 ~~k~e~~~~v~is~~~~l~~i~~~E~~~l~~~le~I~~~g~~lvI~~~~I~~~al~~L~~~~I------~av-----~~~ 321 (559)
T 3p9d_A 253 KARMAMGVQINIDDPEQLEQIRKREAGIVLERVKKIIDAGAQVVLTTKGIDDLCLKEFVEAKI------MGV-----RRC 321 (559)
T ss_dssp CCCCCTTCCEEECSSSCHHHHHHHHHHHHHHHHHHHHTTCCSEEEESSCCCGGGTHHHHHTTC------EEE-----SSC
T ss_pred ccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhCCCEEEEcCCCCHHHHHHHHHcCC------ceE-----ccC
Confidence 45666 79999999999999999999999999999999964 555 466
Q ss_pred hhhhhhhhHhhhCCeEeccCCCCCcc-cccCcccccceeEEE---EecCceEEEcCCCCHHHHHHHHHHHHHHHHhcCCh
Q psy14622 529 RKATLQDLAVATGGIVFGDEASPVKL-EDLQATDLGSVGEIV---ITKDDTLILKGKGKKEDIDRRADQIRDQIEATTSD 604 (788)
Q Consensus 529 R~~~LeDiAilTGg~vis~~~~g~~l-~~v~~~~LG~a~~V~---vt~d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~ 604 (788)
|+..|+|||.+|||+++++. .++.+ +++++++||+|++|. +++++|+++.|.++
T Consensus 322 ~k~~le~ia~~TGa~iis~~-~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~--------------------- 379 (559)
T 3p9d_A 322 KKEDLRRIARATGATLVSSM-SNLEGEETFESSYLGLCDEVVQAKFSDDECILIKGTSK--------------------- 379 (559)
T ss_dssp CHHHHHHHHHHSSCCCBCCS-CCSTTCCCCCTTTSCCEEEEEEEECSSCEEECEEEESS---------------------
T ss_pred CHHHHHHHHHHhCCEEEecc-ccccccccCCHhHCccceEEEEEEEcCceEEEEEcCCC---------------------
Confidence 89999999999999999988 56665 899999999999998 78999999998665
Q ss_pred HHHHHHHHHHHhhcCCeEEEEecCCchhhHHHHHHHHHHHHHHHHHHHHhc-cccCCchhHhhHHHHhhhhhcc-Ccccc
Q psy14622 605 YEREKLQERLARLASGVAVLKVGGSSEVEVNEKKDRVTDALNATRAAVEEG-IVPGGGTALLRCIAVLDKLETA-NADQA 682 (788)
Q Consensus 605 ~~~~~L~eRla~LsggvAvI~VGG~Te~EikErk~r~edAl~a~raA~e~G-iVpGGG~all~as~~L~~~~~~-~~~~~ 682 (788)
|++++|.|||+|+.+++|++++++||||++|+|+++| +|||||+++++++.+|+.+... +.+++
T Consensus 380 --------------~~~~tI~lrG~te~~l~E~kr~l~DAL~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq 445 (559)
T 3p9d_A 380 --------------HSSSSIILRGANDYSLDEMERSLHDSLSVVKRTLESGNVVPGGGCVEAALNIYLDNFATTVGSREQ 445 (559)
T ss_dssp --------------SCCCCEEEEESCHHHHHHHHHHHHHHHHHHHHHHTSSCEECTTTTHHHHHHHHHHHHHTTSCTTHH
T ss_pred --------------CCEEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHhhcCCEEeCccHHHHHHHHHHHHHhcccChHHH
Confidence 7889999999999999999999999999999999999 9999999999999999876422 23333
Q ss_pred CCChhhHHHHHHHHHHHHHhhcChhHHHHHHHHHHHhccCeEEEEecccHHHHHHHHhcchHHHHHHHhCCchHHHHHHH
Q psy14622 683 TGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKV 762 (788)
Q Consensus 683 ~G~~~~i~~r~~~l~~~~~~~~~~~d~~~l~eRla~Lsggvavi~vGa~~~e~~e~~~r~~~a~~a~~Aa~e~g~Vv~~~ 762 (788)
.| ++...++++.+.+++|.|||+++..|+.++
T Consensus 446 ~~------------------------------------------------i~~~a~ALe~ip~~La~NaG~d~~~vv~~l 477 (559)
T 3p9d_A 446 LA------------------------------------------------IAEFAAALLIIPKTLAVNAAKDSSELVAKL 477 (559)
T ss_dssp HH------------------------------------------------HHHHHHHHHHHHHHHHHTSSSCCHHHHHHH
T ss_pred HH------------------------------------------------HHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
Confidence 33 899999999999999999999999999999
Q ss_pred hcC----CC------------CeeEEcCCCcccchhhcCC
Q psy14622 763 LES----SG------------EMGYDAMNNEYVNMIQKVL 786 (788)
Q Consensus 763 ~~~----~~------------~~Gyda~~~~~~dm~~~Gi 786 (788)
++. .. .+|||+.+|+|+||+++||
T Consensus 478 ~~~h~~~~~~~~~~~~~~~~~~~G~d~~~g~~~dm~~~gI 517 (559)
T 3p9d_A 478 RSYHAASQMAKPEDVKRRSYRNYGLDLIRGKIVDEIHAGV 517 (559)
T ss_dssp HHHHHTTSCCC----CCCCCCCEEECTTSSSEEESTTSSC
T ss_pred HHHHhccccccccccccccccceeEECCCCcEeehhhccC
Confidence 752 22 5899999999999999997
No 8
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=8.1e-74 Score=652.07 Aligned_cols=423 Identities=18% Similarity=0.277 Sum_probs=367.7
Q ss_pred EeeccCCCCCcCCCCceeeeecCCCCceEeeChHHhhccccccccccChhhHHHHHHhhhcccccCCCchhHHHHHHHHH
Q psy14622 6 LEQSWGSPKITKDDGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIA 85 (788)
Q Consensus 6 i~~~~~S~kiLGPkG~nkmI~~~~G~~~ITnDGvTIlk~I~l~d~~ehpgAkLl~e~A~~qd~evGDGTTTavVLA~aLL 85 (788)
+++.++|+ |||+||||||++++|+|+|||||+||+++|+++ ||+|||++++|++||+++||||||+||||++|+
T Consensus 23 la~~vktt--LGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~----hP~akll~~~a~~qd~~~GDGTTtvvVLA~~Ll 96 (518)
T 3iyg_D 23 VADAIRTS--LGPKGMDKMIQDGKGDVTITNDGATILKQMQVL----HPAARMLVELSKAQDIEAGDGTTSVVIIAGSLL 96 (518)
T ss_pred HHHHHHhc--cCCCCCceeeeCCCCCeEEECCHHHHHHHcccc----hHHHHHHHHHHHHhhhhhCCCceeHHHHHHHHH
Confidence 45678899 999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhcCCCCC--CHHHHHHHHHhccCCc------hHHhhHHHHHHHHhhhc
Q psy14622 86 KEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVT--TPEEIAQVATISANGD------KAVGELISDAMKRVSAK 157 (788)
Q Consensus 86 ~eglklI~~Gi~P~~I~~Gi~~A~~~ile~L~~ls~~V~--d~eeL~~VA~tSan~d------~~Ig~LIadAv~kV~~~ 157 (788)
++|++++++|+||+.|++||++|++.+++.|+++++|++ +.++|.+||++|+++| ++||+++++||.++++.
T Consensus 97 ~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~l~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~ 176 (518)
T 3iyg_D 97 DSCTKLLQKGIHPTIISESFQKALEKGIEILTDMSRPVELSDRETLLNSAATSLNSKVVSQYSSLLSPMSVDAVMKVIDP 176 (518)
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHheeeCCCCChHHHHHHhHhhhccccchhhHHHHHHHHHHHHHHhhcc
Confidence 999999999999999999999999999999999999987 7899999999999997 78999999999984110
Q ss_pred cccccceeeeccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhcccccccccccccccccCCC
Q psy14622 158 VEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRFGP 237 (788)
Q Consensus 158 ~e~~d~~ILite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~~~~~ 237 (788)
.
T Consensus 177 ------------------------------------------------------------------------------~- 177 (518)
T 3iyg_D 177 ------------------------------------------------------------------------------A- 177 (518)
T ss_pred ------------------------------------------------------------------------------c-
Confidence 0
Q ss_pred ccccccccceeecccccccCcccccccccccccccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeeccccCC
Q psy14622 238 EVRGLMLQGVDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDG 317 (788)
Q Consensus 238 ~~r~~~L~~~~i~~~~~~~tp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 317 (788)
T Consensus 178 -------------------------------------------------------------------------------- 177 (518)
T 3iyg_D 178 -------------------------------------------------------------------------------- 177 (518)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cceeeEeeecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccccCCCCCchhhhhhhh
Q psy14622 318 EALSTLVVGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFIIELKL 397 (788)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (788)
.+|++.
T Consensus 178 ----------------------------------------~~~~~d---------------------------------- 183 (518)
T 3iyg_D 178 ----------------------------------------TATSVD---------------------------------- 183 (518)
T ss_pred ----------------------------------------cCCCcc----------------------------------
Confidence 000000
Q ss_pred hHHHHHHHHHHhhhccCCCCcEEEec--CCccceeEEEEEeeEecccccc--cccccccCC--ceeEeccceeecccc--
Q psy14622 398 VLEYYIQTYIYLCLKVGKEGVITVKD--GKTLTDELEVIEGMKFDRGYIS--PYFINTAKG--AKVEFQDALVLLSES-- 469 (788)
Q Consensus 398 ~~~~~~~~~~~~~~kvG~dGvItvee--g~~~~~~lev~eG~~fd~GylS--pyfvt~~e~--~~v~l~~p~ILitD~-- 469 (788)
+ ..|+|++ |.+. ++.++++||.||+||.| ||+++++.- ..+.|+.|++. ++.
T Consensus 184 ---------------~---~~I~V~k~~Gg~~-~ds~lv~G~~~dk~~~~~mp~~i~n~kIlll~~~Le~~k~~-~~~~i 243 (518)
T 3iyg_D 184 ---------------L---RDIKIVKKLGGTI-DDCELVEGLVLTQKVANSGITRVEKAKIGLIQFCLSAPKTD-MDNQI 243 (518)
T ss_pred ---------------c---ceEEEEEcCCCCh-hhheEeccEEEecccccCCCccccCceEEEEEeeccccccc-cCceE
Confidence 0 1355554 3333 46789999999999999 999988877 56788899988 777
Q ss_pred cccchh-----------hhHHHHHHHHhcCCCeEEE-----ecCCChhhHHhHHhhhcccccceeeecCCCCcchhhhhh
Q psy14622 470 KISSIQ-----------SIIPALELANSKRKPLVIL-----AEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATL 533 (788)
Q Consensus 470 kI~~i~-----------~IlP~Le~~~~~~rpLLII-----Aedi~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~~~L 533 (788)
+|++++ ++.|+++.+.+.+.||||+ +++|+++||.+|+.| .++|||.|+|+ .|
T Consensus 244 ~is~~~~~~~~~~~E~~~l~~~le~I~~~g~~lvi~~k~i~~~~I~~~Al~~L~~~------~I~av~~~~~~-----~l 312 (518)
T 3iyg_D 244 VVSDYVQMDRVLREERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNKM------KIMVVKDIERE-----DI 312 (518)
T ss_pred EecCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccccccCcCHHHHHHHHHc------CcEEEecCCHH-----HH
Confidence 567775 5899999999999999999 899999999999987 47999999764 59
Q ss_pred hhhHhhhCCeEeccCCCCCcccccCcccccceeEEEEec----CceEEEcCCCCHHHHHHHHHHHHHHHHhcCChHHHHH
Q psy14622 534 QDLAVATGGIVFGDEASPVKLEDLQATDLGSVGEIVITK----DDTLILKGKGKKEDIDRRADQIRDQIEATTSDYEREK 609 (788)
Q Consensus 534 eDiAilTGg~vis~~~~g~~l~~v~~~~LG~a~~V~vt~----d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~~~~~~ 609 (788)
+|||.+|||+++++ ++++++++||+|++|.+.+ ++++++.|..+
T Consensus 313 e~ia~~tGa~ii~~------l~~l~~~~LG~a~~v~~~~~g~~~~~~~~~g~~~-------------------------- 360 (518)
T 3iyg_D 313 EFICKTIGTKPVAH------VDQFTADMLGSAELAEEVSLNGSGKLIKITGCAS-------------------------- 360 (518)
T ss_pred HHHHHHhCCEEecc------cccCCHHHCCcCcEEEEEEeCCCceEEEEECCCC--------------------------
Confidence 99999999999984 6888999999999998754 35567877431
Q ss_pred HHHHHHhhcCCeEEEEecCCchhhHHHHHHHHHHHHHHHHHHHHhc-cccCCchhHhhHHHHhhhhhc-cCccccCCChh
Q psy14622 610 LQERLARLASGVAVLKVGGSSEVEVNEKKDRVTDALNATRAAVEEG-IVPGGGTALLRCIAVLDKLET-ANADQATGKKE 687 (788)
Q Consensus 610 L~eRla~LsggvAvI~VGG~Te~EikErk~r~edAl~a~raA~e~G-iVpGGG~all~as~~L~~~~~-~~~~~~~G~~~ 687 (788)
+|++++|.|||+|+.+++|++++++||||++|+|+++| +|||||+++++++..|+++.. .+.+++.|
T Consensus 361 --------~~~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~--- 429 (518)
T 3iyg_D 361 --------PGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESYC--- 429 (518)
T ss_pred --------CCceEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEeecCcHHHHHHHHHHHHHhhcCChHHHHH---
Confidence 58899999999999999999999999999999999999 999999999999999987542 22233333
Q ss_pred hHHHHHHHHHHHHHhhcChhHHHHHHHHHHHhccCeEEEEecccHHHHHHHHhcchHHHHHHHhCCchHHHHHHHhc---
Q psy14622 688 DIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVLE--- 764 (788)
Q Consensus 688 ~i~~r~~~l~~~~~~~~~~~d~~~l~eRla~Lsggvavi~vGa~~~e~~e~~~r~~~a~~a~~Aa~e~g~Vv~~~~~--- 764 (788)
++...++++.+.+++|.|||+++-.++.++++
T Consensus 430 ---------------------------------------------i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~ 464 (518)
T 3iyg_D 430 ---------------------------------------------IRAFADAMEVIPSTLAENAGLNPISTVTELRNRHA 464 (518)
T ss_pred ---------------------------------------------HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHh
Confidence 89999999999999999999999999999986
Q ss_pred -CCCCeeEEcCCCcccchhhcCC
Q psy14622 765 -SSGEMGYDAMNNEYVNMIQKVL 786 (788)
Q Consensus 765 -~~~~~Gyda~~~~~~dm~~~Gi 786 (788)
.+.++|||+.+|+|+||+++||
T Consensus 465 ~~~~~~G~d~~~g~~~d~~~~gI 487 (518)
T 3iyg_D 465 QGEKTTGINVRKGGISNILEELV 487 (518)
T ss_pred ccCCceeEeCCCCcccchhhccC
Confidence 3356899999999999999997
No 9
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.5e-73 Score=649.33 Aligned_cols=415 Identities=19% Similarity=0.276 Sum_probs=359.5
Q ss_pred EeeccCCCCCcCCCCceeeeecCCCCceEeeChHHhhccccccccccChhhHHHHHHhhhcccccCCCchhHHHHHHHHH
Q psy14622 6 LEQSWGSPKITKDDGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIA 85 (788)
Q Consensus 6 i~~~~~S~kiLGPkG~nkmI~~~~G~~~ITnDGvTIlk~I~l~d~~ehpgAkLl~e~A~~qd~evGDGTTTavVLA~aLL 85 (788)
+++.++|+ |||+||||||++++|+|+|||||+||+++|+++ ||.|||++++|++||+++||||||+||||++|+
T Consensus 23 la~~vktt--LGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~----hP~Akll~e~a~~qd~~~GDGTTtvvVLA~~Ll 96 (515)
T 3iyg_H 23 IAEAVRTT--LGPRGMDKLIVDGRGKATISNDGATILKLLDVV----HPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFL 96 (515)
T ss_pred HHHHHhhC--cCCCCCeEEEECCCCCeEEECCHHHHHHHccCC----CHHHHHHHHHHHHhhceeCcchhhHHHHHHHHH
Confidence 35678899 999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhcCCCCC--C----HHHHHHHHHhccCC------chHHhhHHHHHHHH
Q psy14622 86 KEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVT--T----PEEIAQVATISANG------DKAVGELISDAMKR 153 (788)
Q Consensus 86 ~eglklI~~Gi~P~~I~~Gi~~A~~~ile~L~~ls~~V~--d----~eeL~~VA~tSan~------d~~Ig~LIadAv~k 153 (788)
++|++++++|+||+.|++||++|++.+++.|+++++|++ + ++.|.+||+||+++ ++.||+++++||.+
T Consensus 97 ~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~~~~~L~~va~tsl~sK~~s~~~~~i~~livdAv~~ 176 (515)
T 3iyg_H 97 KQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEIAVTVKKEDKVEQRKLLEKCAMTALSSKLISQQKAFFAKMVVDAVMM 176 (515)
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCChHHHHHHHHHHHHHHhcCCcccccHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999984 5 56779999999875 36899999999987
Q ss_pred hhhccccccceeeeccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhcccccccccccccccc
Q psy14622 154 VSAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDV 233 (788)
Q Consensus 154 V~~~~e~~d~~ILite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~ 233 (788)
++.
T Consensus 177 V~~----------------------------------------------------------------------------- 179 (515)
T 3iyg_H 177 LDD----------------------------------------------------------------------------- 179 (515)
T ss_pred hcc-----------------------------------------------------------------------------
Confidence 310
Q ss_pred cCCCccccccccceeecccccccCcccccccccccccccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeecc
Q psy14622 234 RFGPEVRGLMLQGVDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAE 313 (788)
Q Consensus 234 ~~~~~~r~~~L~~~~i~~~~~~~tp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (788)
+
T Consensus 180 ------------~------------------------------------------------------------------- 180 (515)
T 3iyg_H 180 ------------L------------------------------------------------------------------- 180 (515)
T ss_pred ------------c-------------------------------------------------------------------
Confidence 0
Q ss_pred ccCCcceeeEeeecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccccCCCCCchhhh
Q psy14622 314 DVDGEALSTLVVGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFII 393 (788)
Q Consensus 314 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (788)
T Consensus 181 -------------------------------------------------------------------------------- 180 (515)
T 3iyg_H 181 -------------------------------------------------------------------------------- 180 (515)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhhHHHHHHHHHHhhhccCCCCcEEEecCCc-cceeEEEEEeeEecccccccccccccCCceeEeccceeecccc---
Q psy14622 394 ELKLVLEYYIQTYIYLCLKVGKEGVITVKDGKT-LTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSES--- 469 (788)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~kvG~dGvItveeg~~-~~~~lev~eG~~fd~GylSpyfvt~~e~~~v~l~~p~ILitD~--- 469 (788)
+ .-|.|+|++..+ ..++.++++||.||+||.||||+++++ .++||+||++|.
T Consensus 181 -------------------~-d~~~I~V~k~~Gg~~~ds~lv~G~~~dk~~~~p~~~~~p~----~~en~kIll~~~~Le 236 (515)
T 3iyg_H 181 -------------------L-QLKMIGIKKVQGGALEESQLVAGVAFKKTFSYAGFEMQPK----KYHNPMIALLNVELE 236 (515)
T ss_pred -------------------C-CcceEEEEecCCCCccceEEEeeeEEecCccCcccccCCc----cccccEEEEEccccc
Confidence 0 014566665433 334679999999999999999998887 789999999999
Q ss_pred ----------cccchhhh-----------HHHHHHHHhcCCCeEEEecCCChhhHHhHHhhhcccccceeeecCCCCcch
Q psy14622 470 ----------KISSIQSI-----------IPALELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDN 528 (788)
Q Consensus 470 ----------kI~~i~~I-----------lP~Le~~~~~~rpLLIIAedi~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~ 528 (788)
+|++++++ .|.++.+.+.+.||+|+.++|++ |++..+| .+|.+ .+++.
T Consensus 237 ~~k~e~~~~v~is~~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~d--la~~~l~-~~gI~--------~v~~~ 305 (515)
T 3iyg_H 237 LKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGD--VATQYFA-DRDMF--------CAGRV 305 (515)
T ss_pred ccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEECCcccH--HHHHHHH-HcCCc--------ccccc
Confidence 57888876 67799999999999999999996 4444545 45655 23567
Q ss_pred hhhhhhhhHhhhCCeEeccCCCCCcccccCcccccceeEEEEe---cCceEEEcCCCCHHHHHHHHHHHHHHHHhcCChH
Q psy14622 529 RKATLQDLAVATGGIVFGDEASPVKLEDLQATDLGSVGEIVIT---KDDTLILKGKGKKEDIDRRADQIRDQIEATTSDY 605 (788)
Q Consensus 529 R~~~LeDiAilTGg~vis~~~~g~~l~~v~~~~LG~a~~V~vt---~d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~~ 605 (788)
|+..|+|||.+|||+++++ ++++++++||+|++|.++ +++++++.|.+++
T Consensus 306 ~k~~leria~~tGa~ii~~------l~~~~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~--------------------- 358 (515)
T 3iyg_H 306 PEEDLKRTMMACGGSIQTS------VNALSSDVLGRCQVFEETQIGGERYNFFTGCPKA--------------------- 358 (515)
T ss_pred cHHHHHHHHHHhCCEEeec------cccCCHHHCCcccEEEEEEEcCeEEEEEecCCCC---------------------
Confidence 8999999999999999983 578889999999999876 6899999987653
Q ss_pred HHHHHHHHHHhhcCCeEEEEecCCchhhHHHHHHHHHHHHHHHHHHHHh-ccccCCchhHhhHHHHhhhhhc-cCccccC
Q psy14622 606 EREKLQERLARLASGVAVLKVGGSSEVEVNEKKDRVTDALNATRAAVEE-GIVPGGGTALLRCIAVLDKLET-ANADQAT 683 (788)
Q Consensus 606 ~~~~L~eRla~LsggvAvI~VGG~Te~EikErk~r~edAl~a~raA~e~-GiVpGGG~all~as~~L~~~~~-~~~~~~~ 683 (788)
+.++|.++|+|+.+++|++++++||||++|+|+++ |+|||||+++++++..|+++.. .+.+++.
T Consensus 359 --------------~~~tI~lrG~t~~~l~E~kr~i~DAl~~~r~~v~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~ 424 (515)
T 3iyg_H 359 --------------KTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQL 424 (515)
T ss_pred --------------ceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhCCCeecCCcHHHHHHHHHHHHHHhcCChHHHH
Confidence 35899999999999999999999999999999998 8999999999999999986532 2223333
Q ss_pred CChhhHHHHHHHHHHHHHhhcChhHHHHHHHHHHHhccCeEEEEecccHHHHHHHHhcchHHHHHHHhCCchHHHHHHHh
Q psy14622 684 GKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVL 763 (788)
Q Consensus 684 G~~~~i~~r~~~l~~~~~~~~~~~d~~~l~eRla~Lsggvavi~vGa~~~e~~e~~~r~~~a~~a~~Aa~e~g~Vv~~~~ 763 (788)
| ++...++++.+.+++|.|||+++..|+.+++
T Consensus 425 ~------------------------------------------------i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~ 456 (515)
T 3iyg_H 425 L------------------------------------------------IGAYAKALEIIPRQLCDNAGFDATNILNKLR 456 (515)
T ss_pred H------------------------------------------------HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHH
Confidence 3 8999999999999999999999999999998
Q ss_pred cC----CCCeeEEcCCCcccchhhcCC
Q psy14622 764 ES----SGEMGYDAMNNEYVNMIQKVL 786 (788)
Q Consensus 764 ~~----~~~~Gyda~~~~~~dm~~~Gi 786 (788)
+. +..+|||+.+|+|+||+++||
T Consensus 457 ~~h~~~~~~~G~d~~~g~~~dm~~~gI 483 (515)
T 3iyg_H 457 ARHAQGGMWYGVDINTEDIADNFEAFV 483 (515)
T ss_pred HHhhccCCCeeEeCCCCcccccHhccC
Confidence 63 235899999999999999997
No 10
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=100.00 E-value=1.5e-73 Score=653.33 Aligned_cols=416 Identities=24% Similarity=0.350 Sum_probs=368.3
Q ss_pred EeeccCCCCCcCCCCceeeeecCCCCceEeeChHHhhccccccccccChhhHHHHHHhhhcccccCCCchhHHHHHHHHH
Q psy14622 6 LEQSWGSPKITKDDGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIA 85 (788)
Q Consensus 6 i~~~~~S~kiLGPkG~nkmI~~~~G~~~ITnDGvTIlk~I~l~d~~ehpgAkLl~e~A~~qd~evGDGTTTavVLA~aLL 85 (788)
+++.++|+ |||+||||||++++|+|+|||||+||+|+|+++ ||+|||++++|++||+++||||||+||||++|+
T Consensus 34 la~~vktt--LGP~G~~kml~~~~G~~~iTnDG~tIlk~i~v~----hP~Akll~e~a~~qd~e~GDGTTtvvvLA~~LL 107 (545)
T 1a6d_A 34 IADAVRTT--LGPKGMDKMLVDSIGDIIISNDGATILKEMDVE----HPTAKMIVEVSKAQDTAVGDGTTTAVVLSGELL 107 (545)
T ss_dssp HHHHHHTT--CSTTCCEEEEECSSSCEEEECCHHHHHHHSCCC----SHHHHHHHGGGGCTTTCSTTHHHHHHHHHHHHH
T ss_pred HHHHHHhc--cCCCCCeEEEEcCCCCeEEeCcHHHHHHhhhcc----chHHHHHHHHHHhcCCEECCChhHHHHHHHHHH
Confidence 34668899 999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhcCCCCC-CHHHHHHHHHhccCC------chHHhhHHHHHHHHhhhcc
Q psy14622 86 KEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVT-TPEEIAQVATISANG------DKAVGELISDAMKRVSAKV 158 (788)
Q Consensus 86 ~eglklI~~Gi~P~~I~~Gi~~A~~~ile~L~~ls~~V~-d~eeL~~VA~tSan~------d~~Ig~LIadAv~kV~~~~ 158 (788)
+++++++++|+||+.|++||++|++.+++.|+++++| + +.++|.+||+||+++ ++.|++++++||.++++.
T Consensus 108 ~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~-~~~~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~v~~~- 185 (545)
T 1a6d_A 108 KQAETLLDQGVHPTVISNGYRLAVNEARKIIDEIAEK-STDDATLRKIALTALSGKNTGLSNDFLADLVVKAVNAVAEV- 185 (545)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCEE-CCCHHHHHHHHHHHTTTSSCCSTHHHHHHHHHHHHHHHCEE-
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCC-CCCHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHhcc-
Confidence 9999999999999999999999999999999999999 7 789999999988765 478999999999984110
Q ss_pred ccccceeeeccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhcccccccccccccccccCCCc
Q psy14622 159 EFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRFGPE 238 (788)
Q Consensus 159 e~~d~~ILite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~~~~~~ 238 (788)
T Consensus 186 -------------------------------------------------------------------------------- 185 (545)
T 1a6d_A 186 -------------------------------------------------------------------------------- 185 (545)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccceeecccccccCcccccccccccccccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeeccccCCc
Q psy14622 239 VRGLMLQGVDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGE 318 (788)
Q Consensus 239 ~r~~~L~~~~i~~~~~~~tp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 318 (788)
.
T Consensus 186 ~------------------------------------------------------------------------------- 186 (545)
T 1a6d_A 186 R------------------------------------------------------------------------------- 186 (545)
T ss_dssp S-------------------------------------------------------------------------------
T ss_pred c-------------------------------------------------------------------------------
Confidence 0
Q ss_pred ceeeEeeecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccccCCCCCchhhhhhhhh
Q psy14622 319 ALSTLVVGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFIIELKLV 398 (788)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (788)
.|. ..
T Consensus 187 ----------------~g~------------------------~~----------------------------------- 191 (545)
T 1a6d_A 187 ----------------DGK------------------------TI----------------------------------- 191 (545)
T ss_dssp ----------------SSS------------------------EE-----------------------------------
T ss_pred ----------------CCC------------------------cc-----------------------------------
Confidence 000 00
Q ss_pred HHHHHHHHHHhhhccCCCCcEEEe--cCCccceeEEEEEeeEecccccccccccccCCceeEeccceeeccccc------
Q psy14622 399 LEYYIQTYIYLCLKVGKEGVITVK--DGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESK------ 470 (788)
Q Consensus 399 ~~~~~~~~~~~~~kvG~dGvItve--eg~~~~~~lev~eG~~fd~GylSpyfvt~~e~~~v~l~~p~ILitD~k------ 470 (788)
+- -+.|+|+ +|.+++++ ++++||.||+||.||||. ..++||+||++|.+
T Consensus 192 --------------~d-~~~I~V~k~~G~~~~ds-~lv~G~v~dk~~~~~~m~-------~~ien~kIll~~~~Le~~k~ 248 (545)
T 1a6d_A 192 --------------VD-TANIKVDKKNGGSVNDT-QFISGIVIDKEKVHSKMP-------DVVKNAKIALIDSALEIKKT 248 (545)
T ss_dssp --------------CC-GGGEEEEECCCSCSTTC-EEESEEEESCCCSCTTSC-------SEEEEEEEEEECSCBSCCCC
T ss_pred --------------cc-cceEEEEEecCCCceee-EEEeeEEEeccCCCCCCc-------ceecCCEEEEEecCCCcccc
Confidence 00 1457777 78888766 999999999999999993 24789999999999
Q ss_pred -------ccchhhh-----------HHHHHHHHhcCCCeEEEecCCChhhHHhHHhhhcccccceeeecCCCCcchhhhh
Q psy14622 471 -------ISSIQSI-----------IPALELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKAT 532 (788)
Q Consensus 471 -------I~~i~~I-----------lP~Le~~~~~~rpLLIIAedi~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~~~ 532 (788)
|++++++ .|.++.+.+.++||||++++|+++||.+|+.|+ ++||+ +.|+..
T Consensus 249 e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~------I~av~-----~~~k~~ 317 (545)
T 1a6d_A 249 EIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQKGIDDVAQHYLAKEG------IYAVR-----RVKKSD 317 (545)
T ss_dssp SSCCEEEECSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHHT------CEEEC-----SCCHHH
T ss_pred cCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHCC------eeEec-----cCCHHH
Confidence 8888886 999999999999999999999999999999985 67774 668999
Q ss_pred hhhhHhhhCCeEeccCCCCCcccccCcccccceeEEEEe---cCceEEEcCCCCHHHHHHHHHHHHHHHHhcCChHHHHH
Q psy14622 533 LQDLAVATGGIVFGDEASPVKLEDLQATDLGSVGEIVIT---KDDTLILKGKGKKEDIDRRADQIRDQIEATTSDYEREK 609 (788)
Q Consensus 533 LeDiAilTGg~vis~~~~g~~l~~v~~~~LG~a~~V~vt---~d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~~~~~~ 609 (788)
|+|||.+|||++++ +++++++++||+|++|.+. +++++++.|.++
T Consensus 318 le~ia~~tGa~iis------~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~-------------------------- 365 (545)
T 1a6d_A 318 MEKLAKATGAKIVT------DLDDLTPSVLGEAETVEERKIGDDRMTFVMGCKN-------------------------- 365 (545)
T ss_dssp HHHHHHHHCCCEES------SGGGCCGGGCEEEEEEEEEEETTEEEEEEEEESC--------------------------
T ss_pred HHHHHHHhCCeeec------ccccCCHHHCCCceEEEEEEecCceEEEEecCCC--------------------------
Confidence 99999999999997 5688999999999999876 689999998654
Q ss_pred HHHHHHhhcCCeEEEEecCCchhhHHHHHHHHHHHHHHHHHHHHhc-cccCCchhHhhHHHHhhhhhc-cCccccCCChh
Q psy14622 610 LQERLARLASGVAVLKVGGSSEVEVNEKKDRVTDALNATRAAVEEG-IVPGGGTALLRCIAVLDKLET-ANADQATGKKE 687 (788)
Q Consensus 610 L~eRla~LsggvAvI~VGG~Te~EikErk~r~edAl~a~raA~e~G-iVpGGG~all~as~~L~~~~~-~~~~~~~G~~~ 687 (788)
+++++|.|||+|+.+++|++++++||||++|+|+++| +|||||+++++++.+|+++.. .+.+++.|
T Consensus 366 ---------~~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~a~~~g~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~--- 433 (545)
T 1a6d_A 366 ---------PKAVSILIRGGTDHVVSEVERALNDAIRVVAITKEDGKFLWGGGAVEAELAMRLAKYANSVGGREQLA--- 433 (545)
T ss_dssp ---------SSCEEEEECCSSSTTHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHTSCHHHHHH---
T ss_pred ---------CceEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEEeCcCHHHHHHHHHHHHHhhccCccHHHH---
Confidence 5689999999999999999999999999999999999 999999999999999987642 12222222
Q ss_pred hHHHHHHHHHHHHHhhcChhHHHHHHHHHHHhccCeEEEEecccHHHHHHHHhcchHHHHHHHhCCchHHHHHHHhcC--
Q psy14622 688 DIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVLES-- 765 (788)
Q Consensus 688 ~i~~r~~~l~~~~~~~~~~~d~~~l~eRla~Lsggvavi~vGa~~~e~~e~~~r~~~a~~a~~Aa~e~g~Vv~~~~~~-- 765 (788)
++...++++.+.+++|.|||++...|+.++++.
T Consensus 434 ---------------------------------------------i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~ 468 (545)
T 1a6d_A 434 ---------------------------------------------IEAFAKALEIIPRTLAENAGIDPINTLIKLKADDE 468 (545)
T ss_dssp ---------------------------------------------HHHHHHHHTHHHHHHHHHHTSCHHHHHHHHHHHHH
T ss_pred ---------------------------------------------HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhh
Confidence 899999999999999999999999999999842
Q ss_pred --CCCeeEEcCCCcccchhhcCC
Q psy14622 766 --SGEMGYDAMNNEYVNMIQKVL 786 (788)
Q Consensus 766 --~~~~Gyda~~~~~~dm~~~Gi 786 (788)
...+|||+.+|+|+||+++||
T Consensus 469 ~~~~~~G~d~~~g~~~d~~~~gI 491 (545)
T 1a6d_A 469 KGRISVGVDLDNNGVGDMKAKGV 491 (545)
T ss_dssp TTCTTEEEETTTTEEEEHHHHTC
T ss_pred cCCCCcceecccCccccchhcCc
Confidence 247999999999999999997
No 11
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=100.00 E-value=1.1e-73 Score=655.07 Aligned_cols=418 Identities=24% Similarity=0.353 Sum_probs=361.0
Q ss_pred EeeccCCCCCcCCCCceeeeecCCCCceEeeChHHhhccccccccccChhhHHHHHHhhhcccccCCCchhHHHHHHHHH
Q psy14622 6 LEQSWGSPKITKDDGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIA 85 (788)
Q Consensus 6 i~~~~~S~kiLGPkG~nkmI~~~~G~~~ITnDGvTIlk~I~l~d~~ehpgAkLl~e~A~~qd~evGDGTTTavVLA~aLL 85 (788)
+++.++|+ |||+||||||++++|+|+|||||+||+|+|+++ ||+|||++++|++||+++||||||+||||++|+
T Consensus 42 la~~vktt--LGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~----hP~Akll~e~a~~qd~e~GDGTTtvvVLA~eLL 115 (553)
T 3ko1_A 42 VEEALKST--YGPRGMDKMLVDSLGDITITNDGATILDKMDLQ----HPAAKLLVQIAKGQDEETADGTKTAVIFSGELV 115 (553)
T ss_dssp HHHHHGGG--CSTTCCEEEEECTTSCEEEECCHHHHHHSSCCC----SHHHHHHHHHHHTCSSSSSTTHHHHHHHHHHHH
T ss_pred HHHHHHhc--cCCcchhhHHHhhccceEEecCccchhhhhhcc----ChhHHHHHHHhhCCcccccCCceeEEEehHHHH
Confidence 35668888 999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhcCCCCC--CHHHHHHHHHhccCC------chHHhhHHHHHHHHhhhc
Q psy14622 86 KEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVT--TPEEIAQVATISANG------DKAVGELISDAMKRVSAK 157 (788)
Q Consensus 86 ~eglklI~~Gi~P~~I~~Gi~~A~~~ile~L~~ls~~V~--d~eeL~~VA~tSan~------d~~Ig~LIadAv~kV~~~ 157 (788)
++|++++++|+||+.|++||++|++.+++.|++++++++ +.++|.+||++|+++ +++||+++++||.+++++
T Consensus 116 ~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~e~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~ 195 (553)
T 3ko1_A 116 KKAEDLLYKDVHPTIIISGYKKAEEVALQTIQELAQTVSINDTDLLRKIAMTSLSSKAVAGAREYIADIVVKAVTQVAEL 195 (553)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCEECCTTCHHHHHHHHHHHHTTSSCCTTHHHHHHHHHHHHHHHCCC
T ss_pred HhHHHHHhcCCCceEEehhhhHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHhhHHhhhhHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999987 789999999999998 578999999999984110
Q ss_pred cccccceeeeccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhcccccccccccccccccCCC
Q psy14622 158 VEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRFGP 237 (788)
Q Consensus 158 ~e~~d~~ILite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~~~~~ 237 (788)
T Consensus 196 -------------------------------------------------------------------------------- 195 (553)
T 3ko1_A 196 -------------------------------------------------------------------------------- 195 (553)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccccceeecccccccCcccccccccccccccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeeccccCC
Q psy14622 238 EVRGLMLQGVDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDG 317 (788)
Q Consensus 238 ~~r~~~L~~~~i~~~~~~~tp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 317 (788)
++|
T Consensus 196 ---------------------------------~~G-------------------------------------------- 198 (553)
T 3ko1_A 196 ---------------------------------RGD-------------------------------------------- 198 (553)
T ss_dssp ---------------------------------TTS--------------------------------------------
T ss_pred ---------------------------------cCC--------------------------------------------
Confidence 000
Q ss_pred cceeeEeeecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccccCCCCCchhhhhhhh
Q psy14622 318 EALSTLVVGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFIIELKL 397 (788)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (788)
..+++
T Consensus 199 -------------------~~~~d-------------------------------------------------------- 203 (553)
T 3ko1_A 199 -------------------KWYVD-------------------------------------------------------- 203 (553)
T ss_dssp -------------------SCCCC--------------------------------------------------------
T ss_pred -------------------ceEEe--------------------------------------------------------
Confidence 00000
Q ss_pred hHHHHHHHHHHhhhccCCCCcEEEecCCc-cceeEEEEEeeEecccccccccccccCCceeEeccceeecccc-------
Q psy14622 398 VLEYYIQTYIYLCLKVGKEGVITVKDGKT-LTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSES------- 469 (788)
Q Consensus 398 ~~~~~~~~~~~~~~kvG~dGvItveeg~~-~~~~lev~eG~~fd~GylSpyfvt~~e~~~v~l~~p~ILitD~------- 469 (788)
+ ..|+|++..+ ..++.++++||.||+||.||||. ..++||+||++|.
T Consensus 204 ---------------l---~~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~~~m~-------~~ien~kIll~d~~Le~~k~ 258 (553)
T 3ko1_A 204 ---------------L---DNIQIVKKAGGSINDTQLVYGIVVDKEVVHPGMP-------KRLENAKIALIDASLEVEKP 258 (553)
T ss_dssp ---------------G---GGEEEEECCCSCGGGCEEESEEEECSCBSCTTSC-------SCCBSCEEEEECSCBSCCCC
T ss_pred ---------------c---hhHHHHHHhCCccccceeeEEEEecccccCCCCc-------cccccceEEEecCcccccCc
Confidence 0 0155554332 22567899999999999999983 2588999999999
Q ss_pred ------cccchhh-----------hHHHHHHHHhcCCCeEEEecCCChhhHHhHHhhhcccccceeeecCCCCcchhhhh
Q psy14622 470 ------KISSIQS-----------IIPALELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKAT 532 (788)
Q Consensus 470 ------kI~~i~~-----------IlP~Le~~~~~~rpLLIIAedi~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~~~ 532 (788)
+|+++++ +.|.++.+.+.+.||||++++|+++||.+|+. +|.+ +|+.. |+..
T Consensus 259 e~~~~v~Iss~~~l~~~~~~E~~~l~~~vekI~~~g~~vvI~~~~I~~~al~~L~~---~gI~---~v~~v-----~k~~ 327 (553)
T 3ko1_A 259 ELDAEIRINDPTQMQKFLDEEENLIKEKVDKILATGANVIICQKGIDEVAQSYLAK---KGVL---AVRRA-----KKSD 327 (553)
T ss_dssp TTTCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECSSCBCSHHHHHHHH---HTCE---EECCC-----CHHH
T ss_pred ccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhcceEEEeccChHHHHHHHHHh---cchh---hhhhh-----hhhh
Confidence 6778877 67778999999999999999999999999984 3544 44432 7889
Q ss_pred hhhhHhhhCCeEeccCCCCCcccccCcccccceeEEEEe---cCceEEEcCCCCHHHHHHHHHHHHHHHHhcCChHHHHH
Q psy14622 533 LQDLAVATGGIVFGDEASPVKLEDLQATDLGSVGEIVIT---KDDTLILKGKGKKEDIDRRADQIRDQIEATTSDYEREK 609 (788)
Q Consensus 533 LeDiAilTGg~vis~~~~g~~l~~v~~~~LG~a~~V~vt---~d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~~~~~~ 609 (788)
|+|||.+|||++++ +++++++++||+|++|.+. +++|+++.|.+++.
T Consensus 328 leria~~tGa~ivs------~l~~l~~~~LG~a~~v~~~~ig~d~~~~i~g~~~~~------------------------ 377 (553)
T 3ko1_A 328 LEKLARATGGRVVS------NIDEISEQDLGYASLIEERKVGEDKMVFVEGAKNPK------------------------ 377 (553)
T ss_dssp HHHHHTTTTCCEES------CGGGCCSSSSEECSEEECCCCSSSCCEEEESCSSSS------------------------
T ss_pred HHHHHHhhCCeeec------ccccCChhhcchHHHHHHhhcCcceEEEeccCCCCc------------------------
Confidence 99999999999998 4688999999999999876 89999999987653
Q ss_pred HHHHHHhhcCCeEEEEecCCchhhHHHHHHHHHHHHHHHHHHHHhc-cccCCchhHhhHHHHhhhhhc-cCccccCCChh
Q psy14622 610 LQERLARLASGVAVLKVGGSSEVEVNEKKDRVTDALNATRAAVEEG-IVPGGGTALLRCIAVLDKLET-ANADQATGKKE 687 (788)
Q Consensus 610 L~eRla~LsggvAvI~VGG~Te~EikErk~r~edAl~a~raA~e~G-iVpGGG~all~as~~L~~~~~-~~~~~~~G~~~ 687 (788)
.++|.|||+|+.+++|++++++||||++|+|+++| +|||||+++++++..|+++.. .+.+++.|
T Consensus 378 -----------~~TI~lrG~te~~l~E~er~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~--- 443 (553)
T 3ko1_A 378 -----------SISILIRGGLERLVDETERALRDALGTVADVIKDGRAIAGGGAVEIEIAKKLRKYAPQVGGKEQLA--- 443 (553)
T ss_dssp -----------CEEEEECCSSTTHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHHHCSHHHHH---
T ss_pred -----------eEEEeeeccHHHHHHHHHHHHHHHHHHHHHHhhcCceecCCceeEeHHHHHHHHhccccCChhHhH---
Confidence 37799999999999999999999999999999999 999999999999999987542 12233333
Q ss_pred hHHHHHHHHHHHHHhhcChhHHHHHHHHHHHhccCeEEEEecccHHHHHHHHhcchHHHHHHHhCCchHHHHHHHhcCC-
Q psy14622 688 DIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVLESS- 766 (788)
Q Consensus 688 ~i~~r~~~l~~~~~~~~~~~d~~~l~eRla~Lsggvavi~vGa~~~e~~e~~~r~~~a~~a~~Aa~e~g~Vv~~~~~~~- 766 (788)
++...++++.+.+++|.|||+++..++.++++..
T Consensus 444 ---------------------------------------------i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~ 478 (553)
T 3ko1_A 444 ---------------------------------------------VEAYANALESLVSILIENAGFDPIDLLMKLRSTHE 478 (553)
T ss_dssp ---------------------------------------------HHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHTTC
T ss_pred ---------------------------------------------HHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHhh
Confidence 8999999999999999999999999999998632
Q ss_pred ----CCeeEEcCCCcccchhhcCC
Q psy14622 767 ----GEMGYDAMNNEYVNMIQKVL 786 (788)
Q Consensus 767 ----~~~Gyda~~~~~~dm~~~Gi 786 (788)
..+|||+.+|+|+||+++||
T Consensus 479 ~~~~~~~G~d~~~g~~~d~~~~gI 502 (553)
T 3ko1_A 479 NENNKWYGIDLYAGQPVDMWQKGV 502 (553)
T ss_dssp SGGGTTEEEETTTTEEEESGGGSC
T ss_pred CcCCceEeEEeecCCchHHHHhCc
Confidence 45899999999999999997
No 12
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=100.00 E-value=6.5e-74 Score=656.03 Aligned_cols=414 Identities=23% Similarity=0.359 Sum_probs=360.6
Q ss_pred EeeccCCCCCcCCCCceeeeecCCCCceEeeChHHhhccccccccccChhhHHHHHHhhhcccccCCCchhHHHHHHHHH
Q psy14622 6 LEQSWGSPKITKDDGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIA 85 (788)
Q Consensus 6 i~~~~~S~kiLGPkG~nkmI~~~~G~~~ITnDGvTIlk~I~l~d~~ehpgAkLl~e~A~~qd~evGDGTTTavVLA~aLL 85 (788)
+++.++|+ |||+||||||++++|+|+|||||+||+|+|+++ ||+|||++++|++||+++||||||+||||++|+
T Consensus 31 la~~vktt--LGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~----hP~Akll~e~a~~qd~e~GDGTTtvvVLA~~Ll 104 (543)
T 3ruv_A 31 IAETVRST--LGPKGMDKMLVDDLGDVVVTNDGVTILREMSVE----HPAAKMLIEVAKTQEKEVGDGTTTAVVVAGELL 104 (543)
T ss_dssp HHHHHHTT--CSTTCCEEEEECTTSCEEEECCHHHHHHHSCCC----CHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHH
T ss_pred HHHHHHhc--cCCCCCeEEEECCCCCEEEECCHHHHHHHccCc----CHHHHHHHHHHHHHHhhhCCCcccHHHHHHHHH
Confidence 35678899 999999999999999999999999999999998 999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhcCCCCC--CHHHHHHHHHhccCC------chHHhhHHHHHHHHhhhc
Q psy14622 86 KEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVT--TPEEIAQVATISANG------DKAVGELISDAMKRVSAK 157 (788)
Q Consensus 86 ~eglklI~~Gi~P~~I~~Gi~~A~~~ile~L~~ls~~V~--d~eeL~~VA~tSan~------d~~Ig~LIadAv~kV~~~ 157 (788)
++|++++++|+||+.|++||++|++.+++.|+++++|++ +.++|.+||+||+++ +++||+++++||.+++++
T Consensus 105 ~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~~~L~~va~tsl~sK~~~~~~~~i~~livdAv~~V~~~ 184 (543)
T 3ruv_A 105 RKAEELLDQNVHPTIVVKGYQAAAQKAQELLKTIACEVGAQDKEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDD 184 (543)
T ss_dssp HHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHHHHHHTCGGGCCHHHHHHHHHHHHHHCCT
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHhhcc
Confidence 999999999999999999999999999999999999987 799999999999987 578999999999984110
Q ss_pred cccccceeeeccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhcccccccccccccccccCCC
Q psy14622 158 VEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRFGP 237 (788)
Q Consensus 158 ~e~~d~~ILite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~~~~~ 237 (788)
T Consensus 185 -------------------------------------------------------------------------------- 184 (543)
T 3ruv_A 185 -------------------------------------------------------------------------------- 184 (543)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccccceeecccccccCcccccccccccccccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeeccccCC
Q psy14622 238 EVRGLMLQGVDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDG 317 (788)
Q Consensus 238 ~~r~~~L~~~~i~~~~~~~tp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 317 (788)
+
T Consensus 185 ----------------------------------~--------------------------------------------- 185 (543)
T 3ruv_A 185 ----------------------------------E--------------------------------------------- 185 (543)
T ss_dssp ----------------------------------T---------------------------------------------
T ss_pred ----------------------------------C---------------------------------------------
Confidence 0
Q ss_pred cceeeEeeecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccccCCCCCchhhhhhhh
Q psy14622 318 EALSTLVVGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFIIELKL 397 (788)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (788)
|++.
T Consensus 186 ------------------------------------------g~~d---------------------------------- 189 (543)
T 3ruv_A 186 ------------------------------------------GKVD---------------------------------- 189 (543)
T ss_dssp ------------------------------------------SCCC----------------------------------
T ss_pred ------------------------------------------CCcc----------------------------------
Confidence 0000
Q ss_pred hHHHHHHHHHHhhhccCCCCcEEEec--CCccceeEEEEEeeEecccccccccccccCCceeEeccceeecccc------
Q psy14622 398 VLEYYIQTYIYLCLKVGKEGVITVKD--GKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSES------ 469 (788)
Q Consensus 398 ~~~~~~~~~~~~~~kvG~dGvItvee--g~~~~~~lev~eG~~fd~GylSpyfvt~~e~~~v~l~~p~ILitD~------ 469 (788)
+ ..|+|++ |.+. ++.++++||.||+||.||||. ..++||+||++|.
T Consensus 190 ---------------l---~~I~V~k~~Gg~~-~ds~lv~G~v~dk~~~~~~m~-------~~~~n~kIll~~~~Le~~k 243 (543)
T 3ruv_A 190 ---------------K---DLIKIEKKSGASI-DDTELIKGVLVDKERVSAQMP-------KKVTDAKIALLNCAIEIKE 243 (543)
T ss_dssp ---------------G---GGEEEEEEECSCG-GGCEEESSEEESCCCSCTTSC-------SEEEEEEEEEESSCBSCCC
T ss_pred ---------------c---ceEEEEEcCCCCc-ccceeecceEEeccccCcccc-------ccccCcEEEEEcccccccc
Confidence 0 0255553 3333 467899999999999999982 3688999999999
Q ss_pred -------cccchhh-----------hHHHHHHHHhcCCCeEEEecCCChhhHHhHHhhhcccccceeeecCCCCcchhhh
Q psy14622 470 -------KISSIQS-----------IIPALELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKA 531 (788)
Q Consensus 470 -------kI~~i~~-----------IlP~Le~~~~~~rpLLIIAedi~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~~ 531 (788)
+|+++++ +.|.++.+.+.+.||||++++|+++||.+|+. +|.+ +|+.. |+.
T Consensus 244 ~e~~~~v~Iss~~~l~~~~~~E~~~l~~~ve~I~~~g~~vvi~~~~I~~~al~~L~~---~gI~---~v~~v-----~k~ 312 (543)
T 3ruv_A 244 TETDAEIRITDPAKLMEFIEQEEKMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAK---EGIV---AARRV-----KKS 312 (543)
T ss_dssp CSSCCCEEECSTTHHHHHHHHHHHHHHHHHHHHHHHTCSEEEESSCBCHHHHHHHHH---TTCE---EECSC-----CHH
T ss_pred cccCceeEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCCccHHHHHHHHH---cCcE---EEeeC-----CHH
Confidence 5777777 67778899999999999999999999999984 4544 44432 788
Q ss_pred hhhhhHhhhCCeEeccCCCCCcccccCcccccceeEEEEe---cCceEEEcCCCCHHHHHHHHHHHHHHHHhcCChHHHH
Q psy14622 532 TLQDLAVATGGIVFGDEASPVKLEDLQATDLGSVGEIVIT---KDDTLILKGKGKKEDIDRRADQIRDQIEATTSDYERE 608 (788)
Q Consensus 532 ~LeDiAilTGg~vis~~~~g~~l~~v~~~~LG~a~~V~vt---~d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~~~~~ 608 (788)
.|+|||.+|||++++ +++++++++||+|++|.+. +++|+++.|.+++.
T Consensus 313 ~le~ia~~tGa~iis------~l~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~----------------------- 363 (543)
T 3ruv_A 313 DMEKLAKATGANVIA------AIAALSAQDLGDAGLVEERKISGDSMIFVEECKHPK----------------------- 363 (543)
T ss_dssp HHHHHHHHHCCCEES------CGGGCCGGGCEEEEEEEEEEETTEEEEEEECCSSCS-----------------------
T ss_pred HHHHHHHHhCCceec------ccccCCHHHCCcccEEEEEEeCCceEEEEECCCCCc-----------------------
Confidence 999999999999998 4688999999999999876 88999999987653
Q ss_pred HHHHHHHhhcCCeEEEEecCCchhhHHHHHHHHHHHHHHHHHHHHhc-cccCCchhHhhHHHHhhhhhc-cCccccCCCh
Q psy14622 609 KLQERLARLASGVAVLKVGGSSEVEVNEKKDRVTDALNATRAAVEEG-IVPGGGTALLRCIAVLDKLET-ANADQATGKK 686 (788)
Q Consensus 609 ~L~eRla~LsggvAvI~VGG~Te~EikErk~r~edAl~a~raA~e~G-iVpGGG~all~as~~L~~~~~-~~~~~~~G~~ 686 (788)
.++|.|||+|+.+++|++++++||||++|+|+++| +|||||+++++++..|+++.. .+.+++.|
T Consensus 364 ------------~~TI~lrG~te~~l~E~kr~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~-- 429 (543)
T 3ruv_A 364 ------------AVTMLIRGTTEHVIEEVARAVDDAVGVVGCTIEDGRIVSGGGSTEVELSMKLREYAEGISGREQLA-- 429 (543)
T ss_dssp ------------SEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHTCCTTHHHH--
T ss_pred ------------eeEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcCCeecCCcHHHHHHHHHHHHHhhcCChHHHHH--
Confidence 37799999999999999999999999999999999 999999999999999987642 23333333
Q ss_pred hhHHHHHHHHHHHHHhhcChhHHHHHHHHHHHhccCeEEEEecccHHHHHHHHhcchHHHHHHHhCCchHHHHHHHhcC-
Q psy14622 687 EDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVLES- 765 (788)
Q Consensus 687 ~~i~~r~~~l~~~~~~~~~~~d~~~l~eRla~Lsggvavi~vGa~~~e~~e~~~r~~~a~~a~~Aa~e~g~Vv~~~~~~- 765 (788)
++...++++.+.+++|.|||++...++.++++.
T Consensus 430 ----------------------------------------------i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h 463 (543)
T 3ruv_A 430 ----------------------------------------------VRAFADALEVIPRTLAENAGLDAIEILVKVRAAH 463 (543)
T ss_dssp ----------------------------------------------HHHHHHHHTHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred ----------------------------------------------HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 899999999999999999999999999999752
Q ss_pred ----CCCeeEEcCCCcccchhhcCC
Q psy14622 766 ----SGEMGYDAMNNEYVNMIQKVL 786 (788)
Q Consensus 766 ----~~~~Gyda~~~~~~dm~~~Gi 786 (788)
+..+|||+.+|+|+||+++||
T Consensus 464 ~~~~~~~~G~d~~~g~~~dm~~~gI 488 (543)
T 3ruv_A 464 ASNGNKCAGLNVFTGAVEDMCENGV 488 (543)
T ss_dssp TTTCCTTEEECTTTCSEEETTTTTC
T ss_pred hhcCCceeeeeCCCCccccHHHcCC
Confidence 246999999999999999997
No 13
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=100.00 E-value=7.4e-74 Score=653.65 Aligned_cols=421 Identities=20% Similarity=0.264 Sum_probs=361.5
Q ss_pred EeeccCCCCCcCCCCceeeeecCCCCceEeeChHHhhccccccccccChhhHHHHHHhhhcccccCCCchhHHHHHHHHH
Q psy14622 6 LEQSWGSPKITKDDGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIA 85 (788)
Q Consensus 6 i~~~~~S~kiLGPkG~nkmI~~~~G~~~ITnDGvTIlk~I~l~d~~ehpgAkLl~e~A~~qd~evGDGTTTavVLA~aLL 85 (788)
+++.++|+ |||+||||||++++|+|+|||||+||+++|+++ ||+|+|++++|++||+++||||||+||||++|+
T Consensus 31 la~~vktt--LGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~----hP~akll~e~a~~qd~e~GDGTTtvvVLA~~Ll 104 (528)
T 3p9d_D 31 VADAIRTS--LGPKGMDKMIKTSRGEIIISNDGHTILKQMAIL----HPVARMLVEVSAAQDSEAGDGTTSVVILTGALL 104 (528)
T ss_dssp HHHHHTTT--SSTTCCCEEEECSSCCEEEECCHHHHHHHSCCC----CTTHHHHHHHHHHHHHHTCSCSHHHHHHHHHHH
T ss_pred HHHHHHhc--cCCCCCeEEEEcCCCCeEEECCHHHHHHHcccC----CHHHHHHHHHHHHhhhhhCCChhhHHHHHHHHH
Confidence 35678899 999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhcCCCCC--CHHHHHHHHHhccCCc------hHHhhHHHHHHHHhhhc
Q psy14622 86 KEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVT--TPEEIAQVATISANGD------KAVGELISDAMKRVSAK 157 (788)
Q Consensus 86 ~eglklI~~Gi~P~~I~~Gi~~A~~~ile~L~~ls~~V~--d~eeL~~VA~tSan~d------~~Ig~LIadAv~kV~~~ 157 (788)
++|++++++|+||+.|++||++|++.+++.|+++++|++ +.++|.+||++|++++ ++||+++++||.++++.
T Consensus 105 ~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~e~l~~va~tsl~sK~~~~~~~~i~~livdAv~~V~~~ 184 (528)
T 3p9d_D 105 GAAERLLNKGIHPTIIADSFQSAAKRSVDILLEMCHKVSLSDREQLVRAASTSLSSKIVSQYSSFLAPLAVDSVLKISDE 184 (528)
T ss_dssp HHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCSCCHHHHHHHHHHHSCSSSCSTTHHHHHHHHHHHHHTTCCT
T ss_pred HHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHhcCCccchhHHHHHHHHHHHHHHhccc
Confidence 999999999999999999999999999999999999987 7899999999999984 78999999999984110
Q ss_pred cccccceeeeccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhcccccccccccccccccCCC
Q psy14622 158 VEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRFGP 237 (788)
Q Consensus 158 ~e~~d~~ILite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~~~~~ 237 (788)
.
T Consensus 185 ------------------------------------------------------------------------------~- 185 (528)
T 3p9d_D 185 ------------------------------------------------------------------------------N- 185 (528)
T ss_dssp ------------------------------------------------------------------------------T-
T ss_pred ------------------------------------------------------------------------------c-
Confidence 0
Q ss_pred ccccccccceeecccccccCcccccccccccccccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeeccccCC
Q psy14622 238 EVRGLMLQGVDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDG 317 (788)
Q Consensus 238 ~~r~~~L~~~~i~~~~~~~tp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 317 (788)
.....++.+.+
T Consensus 186 -~~~i~v~~I~I-------------------------------------------------------------------- 196 (528)
T 3p9d_D 186 -SKNVDLNDIRL-------------------------------------------------------------------- 196 (528)
T ss_dssp -TTCCCGGGSBC--------------------------------------------------------------------
T ss_pred -CCccceEEEEE--------------------------------------------------------------------
Confidence 00000111111
Q ss_pred cceeeEeeecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccccCCCCCchhhhhhhh
Q psy14622 318 EALSTLVVGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFIIELKL 397 (788)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (788)
T Consensus 197 -------------------------------------------------------------------------------- 196 (528)
T 3p9d_D 197 -------------------------------------------------------------------------------- 196 (528)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHHHHHHHHHhhhccCCCCcEEEecCCccceeEEEEEeeEecccccccccccccCCceeEeccceeeccccccc-----
Q psy14622 398 VLEYYIQTYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESKIS----- 472 (788)
Q Consensus 398 ~~~~~~~~~~~~~~kvG~dGvItveeg~~~~~~lev~eG~~fd~GylSpyfvt~~e~~~v~l~~p~ILitD~kI~----- 472 (788)
++ ..|.++++ .++++||.||+||.|||| |...++||+||++|.+|+
T Consensus 197 ------------~k----------~~Gg~~~d-s~lv~G~v~dk~~~~~~~------m~~~ien~kIll~~~~le~~k~~ 247 (528)
T 3p9d_D 197 ------------VK----------KVGGTIDD-TEMIDGVVLTQTAIKSAG------GPTRKEKAKIGLIQFQISPPKPD 247 (528)
T ss_dssp ------------CC----------CCSSCSCC-CEEESSCBCCCCCCCSSS------CCSEESSEEEEEECCCSSCCCCS
T ss_pred ------------EE----------ecCCCccc-eEEEeeeEEeecccCccc------CcccccCceEEEEeccccccccc
Confidence 00 01556654 589999999999999998 556899999999999987
Q ss_pred --------chhh-----------hHHHHHHHHhcCCCeEEEecCC-----ChhhHHhHHhhhcccccceeeecCCCCcch
Q psy14622 473 --------SIQS-----------IIPALELANSKRKPLVILAEDV-----DGEALSTLVVNRLKIGLQVAAVKAPGFGDN 528 (788)
Q Consensus 473 --------~i~~-----------IlP~Le~~~~~~rpLLIIAedi-----~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~ 528 (788)
++++ +.|+++.+.+.+.||||++++| ++.||.+|+.|+ ++|||.+
T Consensus 248 ~~~~i~i~~~~~~~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~a~~~~al~~L~~~~------I~av~~~----- 316 (528)
T 3p9d_D 248 TENNIIVNDYRQMDKILKEERAYLLNICKKIKKAKCNVLLIQKSILRDAVNDLALHFLSKLN------IMVVKDI----- 316 (528)
T ss_dssp SEEEEEESSSSHHHHHTHHHHHHHHHHHHHHHHTTCCEEEESSCSCTTSCSCHHHHHHTTTS------CCEEECC-----
T ss_pred cCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCcccccCCHHHHHHHHHcC------cEEEEeC-----
Confidence 4443 8999999999999999999999 999999999875 6888754
Q ss_pred hhhhhhhhHhhhCCeEeccCCCCCcccccCcccccceeEEEEe---cCceEEEcCCCCHHHHHHHHHHHHHHHHhcCChH
Q psy14622 529 RKATLQDLAVATGGIVFGDEASPVKLEDLQATDLGSVGEIVIT---KDDTLILKGKGKKEDIDRRADQIRDQIEATTSDY 605 (788)
Q Consensus 529 R~~~LeDiAilTGg~vis~~~~g~~l~~v~~~~LG~a~~V~vt---~d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~~ 605 (788)
|+..|+|||.+|||+++++. +++++++||+|++|.+. .++++++.|.....
T Consensus 317 ~k~~le~ia~~tGa~ii~~~------~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~-------------------- 370 (528)
T 3p9d_D 317 EREEIEFLSKGLGCKPIADI------ELFTEDRLDSADLVEEIDSDGSKIVRVTGIRNNN-------------------- 370 (528)
T ss_dssp CTHHHHHHHHHHTCCCCSCS------TTCCSSSEEEESCEECCEETTEECCBCTTBCCGG--------------------
T ss_pred CHHHHHHHHHHHCCEEeccc------ccCCHHHCCcccEEEEEEECCEEEEEEEcccccC--------------------
Confidence 78889999999999999853 67888999999999765 33444455532100
Q ss_pred HHHHHHHHHHhhcCCeEEEEecCCchhhHHHHHHHHHHHHHHHHHHHHhc-cccCCchhHhhHHHHhhhhhc-cCccccC
Q psy14622 606 EREKLQERLARLASGVAVLKVGGSSEVEVNEKKDRVTDALNATRAAVEEG-IVPGGGTALLRCIAVLDKLET-ANADQAT 683 (788)
Q Consensus 606 ~~~~L~eRla~LsggvAvI~VGG~Te~EikErk~r~edAl~a~raA~e~G-iVpGGG~all~as~~L~~~~~-~~~~~~~ 683 (788)
.|++++|.|||+|+.+++|++++++||||++|+|+++| +|||||+++++++.+|+.+.. .+.+++.
T Consensus 371 ------------~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~ 438 (528)
T 3p9d_D 371 ------------ARPTVSVVIRGANNMIIDETERSLHDALCVIRCLVKERGLIAGGGAPEIEISRRLSKEARSMEGVQAF 438 (528)
T ss_dssp ------------GCCCCEEECCCSSTTHHHHHHHHHTTTHHHHHHHHHSSCEEETTTHHHHHHHHHHHHCCTTSCHHHHT
T ss_pred ------------CCceEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCccCCCCHHHHHHHHHHHHHhhccChHHHH
Confidence 18899999999999999999999999999999999999 999999999999999987642 2445555
Q ss_pred CChhhHHHHHHHHHHHHHhhcChhHHHHHHHHHHHhccCeEEEEecccHHHHHHHHhcchHHHHHHHhCCchHHHHHHHh
Q psy14622 684 GKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVL 763 (788)
Q Consensus 684 G~~~~i~~r~~~l~~~~~~~~~~~d~~~l~eRla~Lsggvavi~vGa~~~e~~e~~~r~~~a~~a~~Aa~e~g~Vv~~~~ 763 (788)
| ++...++++.+.+++|.|||+++..|+.+++
T Consensus 439 ~------------------------------------------------i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~ 470 (528)
T 3p9d_D 439 I------------------------------------------------WQEFASALEVIPTTLAENAGLNSIKVVTELR 470 (528)
T ss_dssp T------------------------------------------------HHHHHHHHTHHHHHHHHTTSSCHHHHHHHHT
T ss_pred H------------------------------------------------HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 5 8999999999999999999999999999998
Q ss_pred cC----CCCeeEEcCCCcccchhhcCC
Q psy14622 764 ES----SGEMGYDAMNNEYVNMIQKVL 786 (788)
Q Consensus 764 ~~----~~~~Gyda~~~~~~dm~~~Gi 786 (788)
+. ...+|||+.+|+|+||+++||
T Consensus 471 ~~h~~~~~~~G~d~~~g~~~dm~~~gI 497 (528)
T 3p9d_D 471 SKHENGELNDGISVRRSGTTNTYEEHI 497 (528)
T ss_dssp TCCCSSSCCCCCCSSSSSCCCHHHHCC
T ss_pred HHHhccCCccceecCCCCccchHhccC
Confidence 63 256899999999999999997
No 14
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=100.00 E-value=2.3e-73 Score=652.14 Aligned_cols=417 Identities=24% Similarity=0.389 Sum_probs=368.6
Q ss_pred EeeccCCCCCcCCCCceeeeecCCCCceEeeChHHhhccccccccccChhhHHHHHHhhhcccccCCCchhHHHHHHHHH
Q psy14622 6 LEQSWGSPKITKDDGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIA 85 (788)
Q Consensus 6 i~~~~~S~kiLGPkG~nkmI~~~~G~~~ITnDGvTIlk~I~l~d~~ehpgAkLl~e~A~~qd~evGDGTTTavVLA~aLL 85 (788)
+++.++|+ |||+||||||++++|+|+|||||+||+|+|+++ ||+|||++++|++||+++||||||+||||++|+
T Consensus 35 la~~vktt--LGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~----hP~Akll~e~a~~qd~e~GDGTTtvvvLA~~LL 108 (548)
T 1q3q_A 35 IAETVRTT--LGPKGMDKMLVDSLGDIVVTNDCATILDKIDLQ----HPAAKMMVEVAKTQDKEAGDGTTTAVVIAGELL 108 (548)
T ss_dssp HHHHHHTT--CSTTCCEEEEECTTCCEEEESCHHHHHHHSCCC----SHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHH
T ss_pred HHHHHHhc--cCCCCceEEEEcCCCCeEEECCHHHHHHHhhcc----chHHHHHHHHHHhcCCEECCChhHHHHHHHHHH
Confidence 34668899 999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhcCCCCC--CHHHHHHHHHhccCCc------hHHhhHHHHHHHHhhhc
Q psy14622 86 KEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVT--TPEEIAQVATISANGD------KAVGELISDAMKRVSAK 157 (788)
Q Consensus 86 ~eglklI~~Gi~P~~I~~Gi~~A~~~ile~L~~ls~~V~--d~eeL~~VA~tSan~d------~~Ig~LIadAv~kV~~~ 157 (788)
+++++++++|+||+.|++||++|++.+++.|+++++|++ +.++|.+||+||++++ +.|++++++||.++++.
T Consensus 109 ~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~d~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~V~~~ 188 (548)
T 1q3q_A 109 RKAEELLDQNIHPSIITKGYALAAEKAQEILDEIAIRVDPDDEETLLKIAATSITGKNAESHKELLAKLAVEAVKQVAEK 188 (548)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHHHSCSSTTGGGHHHHHHHHHHHHHHHCEE
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhccccccchHHHHHHHHHHHHHhccc
Confidence 999999999999999999999999999999999999987 4899999999887764 68999999999984110
Q ss_pred cccccceeeeccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhcccccccccccccccccCCC
Q psy14622 158 VEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRFGP 237 (788)
Q Consensus 158 ~e~~d~~ILite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~~~~~ 237 (788)
- -|
T Consensus 189 ~----------------------------------------------------------------------------~g- 191 (548)
T 1q3q_A 189 K----------------------------------------------------------------------------DG- 191 (548)
T ss_dssp S----------------------------------------------------------------------------SS-
T ss_pred c----------------------------------------------------------------------------CC-
Confidence 0 00
Q ss_pred ccccccccceeecccccccCcccccccccccccccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeeccccCC
Q psy14622 238 EVRGLMLQGVDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDG 317 (788)
Q Consensus 238 ~~r~~~L~~~~i~~~~~~~tp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 317 (788)
T Consensus 192 -------------------------------------------------------------------------------- 191 (548)
T 1q3q_A 192 -------------------------------------------------------------------------------- 191 (548)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cceeeEeeecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccccCCCCCchhhhhhhh
Q psy14622 318 EALSTLVVGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFIIELKL 397 (788)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (788)
.. .
T Consensus 192 -------------------~~------------------------~---------------------------------- 194 (548)
T 1q3q_A 192 -------------------KY------------------------V---------------------------------- 194 (548)
T ss_dssp -------------------SE------------------------E----------------------------------
T ss_pred -------------------Cc------------------------c----------------------------------
Confidence 00 0
Q ss_pred hHHHHHHHHHHhhhccCCCCcEEEe--cCCccceeEEEEEeeEecccccccccccccCCceeEeccceeeccccc-----
Q psy14622 398 VLEYYIQTYIYLCLKVGKEGVITVK--DGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESK----- 470 (788)
Q Consensus 398 ~~~~~~~~~~~~~~kvG~dGvItve--eg~~~~~~lev~eG~~fd~GylSpyfvt~~e~~~v~l~~p~ILitD~k----- 470 (788)
+- -+.|+|+ +|.+++++ ++++||.||+||.||||. ..++||+||++|.+
T Consensus 195 ---------------~d-~~~I~V~k~~G~~~~ds-~lv~G~v~dk~~~~~~m~-------~~ien~kIll~~~~Le~~k 250 (548)
T 1q3q_A 195 ---------------VD-LDNIKFEKKAGEGVEES-ELVRGVVIDKEVVHPRMP-------KRVENAKIALINEALEVKK 250 (548)
T ss_dssp ---------------CC-GGGEEEEEEEBSCGGGC-EEESSEEESCCCSSTTSC-------SEESSEEEEEECSCBSCCC
T ss_pred ---------------cc-CCeEEEEEecCCCccce-EEEeeEEEeccCCCCCCc-------ceecCCEEEEEecCcCccc
Confidence 00 1356676 78888766 999999999999999993 25899999999999
Q ss_pred --------ccchhhh-----------HHHHHHHHhcCCCeEEEecCCChhhHHhHHhhhcccccceeeecCCCCcchhhh
Q psy14622 471 --------ISSIQSI-----------IPALELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKA 531 (788)
Q Consensus 471 --------I~~i~~I-----------lP~Le~~~~~~rpLLIIAedi~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~~ 531 (788)
|++++++ .|.++.+.+.+.||||++++|+++||.+|+.|+ ++||+ +.|+.
T Consensus 251 ~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~------I~av~-----~~~k~ 319 (548)
T 1q3q_A 251 TETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKYG------IMAVR-----RVKKS 319 (548)
T ss_dssp CSSCCCEEECSHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEESSCBCHHHHHHHHHTT------CEEEC-----SCCHH
T ss_pred ccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCcCEEEEcCCcCHHHHHHHHHCC------cEEEc-----cCCHH
Confidence 8888886 999999999999999999999999999999985 67774 67899
Q ss_pred hhhhhHhhhCCeEeccCCCCCcccccCcccccceeEEEEe---cCceEEEcCCCCHHHHHHHHHHHHHHHHhcCChHHHH
Q psy14622 532 TLQDLAVATGGIVFGDEASPVKLEDLQATDLGSVGEIVIT---KDDTLILKGKGKKEDIDRRADQIRDQIEATTSDYERE 608 (788)
Q Consensus 532 ~LeDiAilTGg~vis~~~~g~~l~~v~~~~LG~a~~V~vt---~d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~~~~~ 608 (788)
.|+|||.+|||++++ +++++++++||+|++|.+. +++++++.|.++
T Consensus 320 ~le~ia~~tGa~ii~------~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~------------------------- 368 (548)
T 1q3q_A 320 DMEKLAKATGAKIVT------NVKDLTPEDLGYAEVVEERKLAGENMIFVEGCKN------------------------- 368 (548)
T ss_dssp HHHHHHHHHCCCCBS------SGGGCCGGGCEEESEEEEEEETTEEEEEEECCSS-------------------------
T ss_pred HHHHHHHHhCCeEec------ccccCCHHHCCCceEEEEEEecCceEEEEecCCC-------------------------
Confidence 999999999999997 5788999999999999876 899999998765
Q ss_pred HHHHHHHhhcCCeEEEEecCCchhhHHHHHHHHHHHHHHHHHHHHhc-cccCCchhHhhHHHHhhhhhc-cCccccCCCh
Q psy14622 609 KLQERLARLASGVAVLKVGGSSEVEVNEKKDRVTDALNATRAAVEEG-IVPGGGTALLRCIAVLDKLET-ANADQATGKK 686 (788)
Q Consensus 609 ~L~eRla~LsggvAvI~VGG~Te~EikErk~r~edAl~a~raA~e~G-iVpGGG~all~as~~L~~~~~-~~~~~~~G~~ 686 (788)
+++++|.+||+|+.+++|++++++||||++|+|+++| +|||||+++++++.+|+++.. .+.+++.|
T Consensus 369 ----------~~~~TI~lrG~te~~l~E~er~l~DAl~~~r~a~~~~~ivpGGGa~e~~~~~~L~~~~~~~~g~~q~~-- 436 (548)
T 1q3q_A 369 ----------PKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAIRLDEYAKQVGGKEALA-- 436 (548)
T ss_dssp ----------CSSEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHSCEEEECTTHHHHHHHHHHHHHHHHHCHHHHHH--
T ss_pred ----------CCeEEEEECCCChHHHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHHHHHHHHHHHhhhcCCcHHHH--
Confidence 5689999999999999999999999999999999999 999999999999999976542 12222222
Q ss_pred hhHHHHHHHHHHHHHhhcChhHHHHHHHHHHHhccCeEEEEecccHHHHHHHHhcchHHHHHHHhCCchHHHHHHHhcC-
Q psy14622 687 EDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVLES- 765 (788)
Q Consensus 687 ~~i~~r~~~l~~~~~~~~~~~d~~~l~eRla~Lsggvavi~vGa~~~e~~e~~~r~~~a~~a~~Aa~e~g~Vv~~~~~~- 765 (788)
++...++++.+.+++|.|||++...++.++++.
T Consensus 437 ----------------------------------------------i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h 470 (548)
T 1q3q_A 437 ----------------------------------------------IENFADALKIIPKTLAENAGLDTVEMLVKVISEH 470 (548)
T ss_dssp ----------------------------------------------HHHHHHHTTHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred ----------------------------------------------HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHh
Confidence 899999999999999999999999999999852
Q ss_pred ---CCCeeEEcCCCcccchhhcCC
Q psy14622 766 ---SGEMGYDAMNNEYVNMIQKVL 786 (788)
Q Consensus 766 ---~~~~Gyda~~~~~~dm~~~Gi 786 (788)
...+|||+.+|+|+||+++||
T Consensus 471 ~~~~~~~G~d~~~g~~~d~~~~gI 494 (548)
T 1q3q_A 471 KNRGLGIGIDVFEGKPADMLEKGI 494 (548)
T ss_dssp HHHCTTEEEETTTTEEEETTTTTC
T ss_pred hcCCCCcceeCCCCCccchhhcCC
Confidence 247999999999999999997
No 15
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=100.00 E-value=5.6e-73 Score=644.50 Aligned_cols=410 Identities=23% Similarity=0.279 Sum_probs=361.0
Q ss_pred EeeccCCCCCcCCCCceeeeecCC--CCceEeeChHHhhccccccccccChhhHHHHHHhhhcccccCCCchhHHHHHHH
Q psy14622 6 LEQSWGSPKITKDDGRNVILEQSW--GSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARA 83 (788)
Q Consensus 6 i~~~~~S~kiLGPkG~nkmI~~~~--G~~~ITnDGvTIlk~I~l~d~~ehpgAkLl~e~A~~qd~evGDGTTTavVLA~a 83 (788)
+++.++|+ |||+||||||++++ |+|+|||||+||+|+|+++ ||+|||++++|++||+++||||||+||||++
T Consensus 22 la~~vktt--LGPkG~~kml~~~~~~G~~~iTnDG~tIlk~i~v~----hp~Akll~e~a~~qd~e~GDGTTtvvVLA~~ 95 (513)
T 3iyg_B 22 IGDLVKST--LGPKGMDKILLSSGRDASLMVTNDGATILKNIGVD----NPAAKVLVDMSRVQDDEVGDGTTSVTVLAAE 95 (513)
T ss_pred HHHHHHhc--cCCCCCeEEeecCCCCCCeEEECCHHHHHHHcccc----CHHHHHHHHHHHHhhhhhCCChhhhHHHHHH
Confidence 35678899 99999999999999 9999999999999999999 9999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhcCCCCC-----CHHHHHHHHHhccCC------chHHhhHHHHHHH
Q psy14622 84 IAKEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVT-----TPEEIAQVATISANG------DKAVGELISDAMK 152 (788)
Q Consensus 84 LL~eglklI~~Gi~P~~I~~Gi~~A~~~ile~L~~ls~~V~-----d~eeL~~VA~tSan~------d~~Ig~LIadAv~ 152 (788)
|+++|++++++|+||+.|++||++|++.+++.|+++++|++ +.++|.+||+||+++ ++.||+++++||.
T Consensus 96 LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~l~~va~tslssK~~~~~~~~i~~livdAv~ 175 (513)
T 3iyg_B 96 LLREAESLIAKKIHPQTIIAGWREATKAARQALLNSAVDHGSDEVKFRQDLMNIAGTTLSSKLLTHHKDHFTKLAVEAVL 175 (513)
T ss_pred HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCcccccccCHHHHHHHHHhhhcccccccchHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999986 578999999999876 3689999999999
Q ss_pred HhhhccccccceeeeccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhccccccccccccccc
Q psy14622 153 RVSAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKD 232 (788)
Q Consensus 153 kV~~~~e~~d~~ILite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~ 232 (788)
++++.
T Consensus 176 ~V~~~--------------------------------------------------------------------------- 180 (513)
T 3iyg_B 176 RLKGS--------------------------------------------------------------------------- 180 (513)
T ss_pred Hhccc---------------------------------------------------------------------------
Confidence 83110
Q ss_pred ccCCCccccccccceeecccccccCcccccccccccccccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeec
Q psy14622 233 VRFGPEVRGLMLQGVDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILA 312 (788)
Q Consensus 233 ~~~~~~~r~~~L~~~~i~~~~~~~tp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (788)
+
T Consensus 181 --------------~----------------------------------------------------------------- 181 (513)
T 3iyg_B 181 --------------G----------------------------------------------------------------- 181 (513)
T ss_pred --------------C-----------------------------------------------------------------
Confidence 0
Q ss_pred cccCCcceeeEeeecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccccCCCCCchhh
Q psy14622 313 EDVDGEALSTLVVGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFI 392 (788)
Q Consensus 313 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (788)
T Consensus 182 -------------------------------------------------------------------------------- 181 (513)
T 3iyg_B 182 -------------------------------------------------------------------------------- 181 (513)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhhhHHHHHHHHHHhhhccCCCCcEEEec--CCccceeEEEEEeeEecccccccccccccCCceeEeccceeecccc-
Q psy14622 393 IELKLVLEYYIQTYIYLCLKVGKEGVITVKD--GKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSES- 469 (788)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~kvG~dGvItvee--g~~~~~~lev~eG~~fd~GylSpyfvt~~e~~~v~l~~p~ILitD~- 469 (788)
.-|.|+|++ |.+..+ .++++||.||+||.+| |...++||+||++|.
T Consensus 182 ----------------------d~~~I~V~ki~gg~~~d-s~lv~G~v~dk~~~~~--------m~~~~en~kIll~~~~ 230 (513)
T 3iyg_B 182 ----------------------NLEAIHVIKKLGGSLAD-SYLDEGFLLDKKIGVN--------QPKRIENAKILIANTG 230 (513)
T ss_pred ----------------------CcCeEEEEEeCCCCccc-eeEEeeEEEeccccCC--------CceeecCceEEEEcCC
Confidence 013455543 444444 5899999999999988 456799999999998
Q ss_pred -------------cccchhhhHH-----------HHHHHHhcCCCeEEEecCCChhhHHhHHhhhcccccceeeecCCCC
Q psy14622 470 -------------KISSIQSIIP-----------ALELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGF 525 (788)
Q Consensus 470 -------------kI~~i~~IlP-----------~Le~~~~~~rpLLIIAedi~~eAL~~Lv~N~~rg~~~v~AVkaP~f 525 (788)
+|++++++.| .++.+.+.+.||||++++|+++||.+|+. ..++|||.|+|
T Consensus 231 Le~~k~e~~~~~v~iss~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~al~~L~~------~~I~av~~~~~ 304 (513)
T 3iyg_B 231 MDTDKIKIFGSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCFINRQLIYNYPEQLFGA------AGVMAIEHADF 304 (513)
T ss_pred cccccccccCCceEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCCccHHHHHHHHH------cCceEEecCCH
Confidence 6788888876 68888899999999999999999999985 46799999986
Q ss_pred cchhhhhhhhhHhhhCCeEeccCCCCCcccccCcccccceeEEE---EecCceEEEcCCCCHHHHHHHHHHHHHHHHhcC
Q psy14622 526 GDNRKATLQDLAVATGGIVFGDEASPVKLEDLQATDLGSVGEIV---ITKDDTLILKGKGKKEDIDRRADQIRDQIEATT 602 (788)
Q Consensus 526 G~~R~~~LeDiAilTGg~vis~~~~g~~l~~v~~~~LG~a~~V~---vt~d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~ 602 (788)
..|+|||.+|||++++ +++++++++||+|++|. +++++++++.|.++
T Consensus 305 -----~~le~ia~~tGa~ii~------~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~------------------- 354 (513)
T 3iyg_B 305 -----VGVERLALVTGGEIAS------TFDHPELVKLGSCKLIEEVMIGEDKLIHFSGVAL------------------- 354 (513)
T ss_pred -----HHHHHHHHHhCCEEec------ccccCCHhHCCcccEEEEEEECCeEEEEEecCCC-------------------
Confidence 4699999999999998 46788899999999997 78888999887542
Q ss_pred ChHHHHHHHHHHHhhcCCeEEEEecCCchhhHHHHHHHHHHHHHHHHHHHHh-ccccCCchhHhhHHHHhhhhhc-cCcc
Q psy14622 603 SDYEREKLQERLARLASGVAVLKVGGSSEVEVNEKKDRVTDALNATRAAVEE-GIVPGGGTALLRCIAVLDKLET-ANAD 680 (788)
Q Consensus 603 s~~~~~~L~eRla~LsggvAvI~VGG~Te~EikErk~r~edAl~a~raA~e~-GiVpGGG~all~as~~L~~~~~-~~~~ 680 (788)
|++++|.|||+|+.+++|++++++||||++|+|+++ |+|||||+++++++..|+++.. .+.+
T Consensus 355 ----------------~~~~tI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~ 418 (513)
T 3iyg_B 355 ----------------GEACTIVLRGATQQILDEAERSLHDALCVLAQTVKDSRTVYGGGCSEMLMAHAVTQLASRTPGK 418 (513)
T ss_pred ----------------CceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhCCcEEeCCcHHHHHHHHHHHHHhhccCcH
Confidence 678999999999999999999999999999999998 9999999999999999987542 2223
Q ss_pred ccCCChhhHHHHHHHHHHHHHhhcChhHHHHHHHHHHHhccCeEEEEecccHHHHHHHHhcchHHHHHHHhCCchHHHHH
Q psy14622 681 QATGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVN 760 (788)
Q Consensus 681 ~~~G~~~~i~~r~~~l~~~~~~~~~~~d~~~l~eRla~Lsggvavi~vGa~~~e~~e~~~r~~~a~~a~~Aa~e~g~Vv~ 760 (788)
++.| ++...++++.+.+++|.|||+++-.|+.
T Consensus 419 ~q~~------------------------------------------------i~~~a~ALe~ip~~La~NaG~d~~~~v~ 450 (513)
T 3iyg_B 419 EAVA------------------------------------------------MESYAKALRMLPTIIADNAGYDSADLVA 450 (513)
T ss_pred HHHH------------------------------------------------HHHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence 3333 8999999999999999999999999999
Q ss_pred HHhcC----CCCeeEEcCCCcccchhhcCC
Q psy14622 761 KVLES----SGEMGYDAMNNEYVNMIQKVL 786 (788)
Q Consensus 761 ~~~~~----~~~~Gyda~~~~~~dm~~~Gi 786 (788)
++++. +..+|||+.+|+|+||+++||
T Consensus 451 ~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI 480 (513)
T 3iyg_B 451 QLRAAHSEGKTTAGLDMKEGTIGDMSVLGI 480 (513)
T ss_pred HHHHHHhcCCCceeecCCCCCccchHhccC
Confidence 99863 346899999999999999997
No 16
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=5.2e-73 Score=644.62 Aligned_cols=422 Identities=18% Similarity=0.278 Sum_probs=361.0
Q ss_pred EeeccCCCCCcCCCCceeeeecCCCCceEeeChHHhhccccccccccChhhHHHHHHhhhcccccCCCchhHHHHHHHHH
Q psy14622 6 LEQSWGSPKITKDDGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIA 85 (788)
Q Consensus 6 i~~~~~S~kiLGPkG~nkmI~~~~G~~~ITnDGvTIlk~I~l~d~~ehpgAkLl~e~A~~qd~evGDGTTTavVLA~aLL 85 (788)
+++.++|+ |||+||||||++++|+|+|||||+||+|+|+++ ||.|||++++|++||+++||||||+||||++|+
T Consensus 23 la~~vktt--LGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~----hP~Akll~e~a~~qd~~~GDGTTtvvVLA~~Ll 96 (512)
T 3iyg_Q 23 LAQTTRTA--YGPNGMNKMVINHLEKLFVTNDAATILRELEVQ----HPAAKMIVMASHMQEQEVGDGTNFVLVFAGALL 96 (512)
T ss_pred HHHHHHhc--cCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccC----CHHHHHHHHHHHHhhhhhCCChhHHHHHHHHHH
Confidence 35678899 999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhc----CCCCCCHHHHHHHHHhccCC-----chHHhhHHHHHHHHhhh
Q psy14622 86 KEGFEKISKGANPIEIRRGVMLAVETIKTHLKEL----SKPVTTPEEIAQVATISANG-----DKAVGELISDAMKRVSA 156 (788)
Q Consensus 86 ~eglklI~~Gi~P~~I~~Gi~~A~~~ile~L~~l----s~~V~d~eeL~~VA~tSan~-----d~~Ig~LIadAv~kV~~ 156 (788)
++|++++++|+||+.|++||++|++.+++.|+++ +.++.++++|.+||++|+++ +++||+++++||.++++
T Consensus 97 ~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~~~~~~~~~~~~~~l~~va~tsl~sK~~~~~~~i~~livdAv~~V~~ 176 (512)
T 3iyg_Q 97 ELAEELLRLGLSVSEVIEGYEIACKKAHEILPDLVCCSAKNLRDVDEVSSLLHTSVMSKQYGNEVFLAKLIAQACVSIFP 176 (512)
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHhCCCCccchHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999998 56777899999999999998 67899999999998421
Q ss_pred ccccccceeeeccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhcccccccccccccccccCC
Q psy14622 157 KVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRFG 236 (788)
Q Consensus 157 ~~e~~d~~ILite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~~~~ 236 (788)
+ +
T Consensus 177 ~------------------------------------------------------------------------------~ 178 (512)
T 3iyg_Q 177 D------------------------------------------------------------------------------S 178 (512)
T ss_pred c------------------------------------------------------------------------------C
Confidence 0 0
Q ss_pred CccccccccceeecccccccCcccccccccccccccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeeccccC
Q psy14622 237 PEVRGLMLQGVDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVD 316 (788)
Q Consensus 237 ~~~r~~~L~~~~i~~~~~~~tp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 316 (788)
....++.+.+
T Consensus 179 ---~~i~v~~I~i------------------------------------------------------------------- 188 (512)
T 3iyg_Q 179 ---GHFNVDNIRV------------------------------------------------------------------- 188 (512)
T ss_pred ---CcccHhHeeE-------------------------------------------------------------------
Confidence 0000011100
Q ss_pred CcceeeEeeecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccccCCCCCchhhhhhh
Q psy14622 317 GEALSTLVVGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFIIELK 396 (788)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (788)
T Consensus 189 -------------------------------------------------------------------------------- 188 (512)
T 3iyg_Q 189 -------------------------------------------------------------------------------- 188 (512)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhHHHHHHHHHHhhhccCCCCcEEEecCCccceeEEEEEeeEecccccccccccccCC-ceeEeccce-eeccccc----
Q psy14622 397 LVLEYYIQTYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFINTAKG-AKVEFQDAL-VLLSESK---- 470 (788)
Q Consensus 397 ~~~~~~~~~~~~~~~kvG~dGvItveeg~~~~~~lev~eG~~fd~GylSpyfvt~~e~-~~v~l~~p~-ILitD~k---- 470 (788)
.=..|.++ ++.++++||.||+||.| |+++.++ +.+.|+.|| ++.+|.+
T Consensus 189 -----------------------~k~~Ggs~-~ds~lv~G~~~dk~~~~--~~~~~~n~kI~ll~~~le~~~~e~k~~v~ 242 (512)
T 3iyg_Q 189 -----------------------CKILGSGV-HSSSVLHGMVFKKETEG--DVTSVKDAKIAVYSCPFDGMITETKGTVL 242 (512)
T ss_pred -----------------------eeccCCCc-ccceEEeeEEEecCcCC--CCcccccCceEEEecccccccccccceEE
Confidence 00014444 57889999999999987 8888884 555679999 9999999
Q ss_pred ccchhhhHHH-------HH----HHHhcCCCeEEEecCCChhhHHhHHhhhcccccceeeecCCCCcchhhhhhhhhHhh
Q psy14622 471 ISSIQSIIPA-------LE----LANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATLQDLAVA 539 (788)
Q Consensus 471 I~~i~~IlP~-------Le----~~~~~~rpLLIIAedi~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~~~LeDiAil 539 (788)
|++++++.|+ |+ .+.+.+.||||++++|++.++..|.- ..++|||.|+|++ |+|||.+
T Consensus 243 Is~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~la~~~l~k------~~I~av~~~~~~d-----le~ia~~ 311 (512)
T 3iyg_Q 243 IKSAEELMNFSKGEENLMDAQVKAIADTGANVVVTGGRVADMALHYANK------YNIMLVRLNSKWD-----LRRLCKT 311 (512)
T ss_pred eCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHH------CCeEEEEeCCHHH-----HHHHHHH
Confidence 9999999998 77 77788999999999999987776542 5789999998665 9999999
Q ss_pred hCCeEeccCCCCCcccccCcccccceeEEEEecC---ceEEEcCCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHh
Q psy14622 540 TGGIVFGDEASPVKLEDLQATDLGSVGEIVITKD---DTLILKGKGKKEDIDRRADQIRDQIEATTSDYEREKLQERLAR 616 (788)
Q Consensus 540 TGg~vis~~~~g~~l~~v~~~~LG~a~~V~vt~d---~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~~~~~~L~eRla~ 616 (788)
|||++++ +++++++++||+|++|.+++. +++++.+. +
T Consensus 312 tGa~iis------~l~~~~~~~LG~a~~v~~~~~g~~~~~~~~~~----------------------------------~ 351 (512)
T 3iyg_Q 312 VGATALP------RLNPPVLEEMGHCDSVYLSEVGDTQVVVFKHE----------------------------------K 351 (512)
T ss_pred hCCEEec------ccccCCHHHCCcccEEEEEEeCCeEEEEEEcc----------------------------------c
Confidence 9999998 468889999999999987753 44444431 1
Q ss_pred hcCCeEEEEecCCchhhHHHHHHHHHHHHHHHHHHHHhc-cccCCchhHhhHHHHhhhhhc-cCccccCCChhhHHHHHH
Q psy14622 617 LASGVAVLKVGGSSEVEVNEKKDRVTDALNATRAAVEEG-IVPGGGTALLRCIAVLDKLET-ANADQATGKKEDIDRRAD 694 (788)
Q Consensus 617 LsggvAvI~VGG~Te~EikErk~r~edAl~a~raA~e~G-iVpGGG~all~as~~L~~~~~-~~~~~~~G~~~~i~~r~~ 694 (788)
++|++++|.|||+|+.+++|++++++||||++|+|+++| +|||||+++++++..|+.+.. .+.+++.|
T Consensus 352 ~~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~---------- 421 (512)
T 3iyg_Q 352 EDGAISTIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGGATEIELAKQITSYGETCPGLEQYA---------- 421 (512)
T ss_pred CCCceEEEEECCCcHHHHHHHHHHHHHHHHHHHHHHhCCCEecCCcHHHHHHHHHHHHHhccCCcHHHHH----------
Confidence 368999999999999999999999999999999999999 999999999999999987542 22233333
Q ss_pred HHHHHHHhhcChhHHHHHHHHHHHhccCeEEEEecccHHHHHHHHhcchHHHHHHHhCCchHHHHHHHhc----CCCCee
Q psy14622 695 QIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVLE----SSGEMG 770 (788)
Q Consensus 695 ~l~~~~~~~~~~~d~~~l~eRla~Lsggvavi~vGa~~~e~~e~~~r~~~a~~a~~Aa~e~g~Vv~~~~~----~~~~~G 770 (788)
++...++++.+.+++|.|||+++..|+.++++ .+.++|
T Consensus 422 --------------------------------------i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G 463 (512)
T 3iyg_Q 422 --------------------------------------IKKFAEAFEAIPRALAENSGVKANEVISKLYAVHQEGNKNVG 463 (512)
T ss_pred --------------------------------------HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCcEE
Confidence 89999999999999999999999999999975 245789
Q ss_pred EEcCCC--cccchhhcCC
Q psy14622 771 YDAMNN--EYVNMIQKVL 786 (788)
Q Consensus 771 yda~~~--~~~dm~~~Gi 786 (788)
||+.++ +|+||+++||
T Consensus 464 ~d~~~~~g~~~d~~~~gI 481 (512)
T 3iyg_Q 464 LDIEAEVPAVKDMLEAGV 481 (512)
T ss_pred EecCCCCCcccchHhccC
Confidence 999965 9999999997
No 17
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=100.00 E-value=6.2e-73 Score=648.01 Aligned_cols=417 Identities=24% Similarity=0.350 Sum_probs=366.9
Q ss_pred EeeccCCCCCcCCCCceeeeecCCCCceEeeChHHhhccccccccccChhhHHHHHHhhhcccccCCCchhHHHHHHHHH
Q psy14622 6 LEQSWGSPKITKDDGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIA 85 (788)
Q Consensus 6 i~~~~~S~kiLGPkG~nkmI~~~~G~~~ITnDGvTIlk~I~l~d~~ehpgAkLl~e~A~~qd~evGDGTTTavVLA~aLL 85 (788)
+++.++|+ |||+||||||++++|+|+|||||+||+|+|+++ ||+|||++++|++||+++||||||+||||++|+
T Consensus 33 la~~vktt--LGP~G~~kml~~~~g~~~iTnDG~tIlk~i~v~----hP~Akll~e~a~~qd~e~GDGTTtvvvLA~~LL 106 (543)
T 1a6d_B 33 ISNSVRSS--LGPRGMDKMLVDSLGDIVITNDGVTILKEMDVE----HPAAKMMVEVSKTQDSFVGDGTTTAVIIAGGLL 106 (543)
T ss_dssp HHHHHHTT--SSTTCCCEEEECTTCCEEEECCHHHHHHHSCCC----SHHHHHHHHHHTCTTCCCTTHHHHHHHHHHHHH
T ss_pred HHHHHHhc--cCCCCCeEEEEcCCCCeEEeCCHHHHHHHhhcc----chHHHHHHHHHHhcCCEECCChhHHHHHHHHHH
Confidence 34668899 999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhcCCCCCC--HHHHHHHHHhccCCc------hHHhhHHHHHHHHhhhc
Q psy14622 86 KEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVTT--PEEIAQVATISANGD------KAVGELISDAMKRVSAK 157 (788)
Q Consensus 86 ~eglklI~~Gi~P~~I~~Gi~~A~~~ile~L~~ls~~V~d--~eeL~~VA~tSan~d------~~Ig~LIadAv~kV~~~ 157 (788)
++|++++++|+||+.|++||++|++.+++.|+++++|++. .++|.+||+||++++ +.|++++++||.++++.
T Consensus 107 ~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~v~~~ 186 (543)
T 1a6d_B 107 QQAQGLINQNVHPTVISEGYRMASEEAKRVIDEISTKIGADEKALLLKMAQTSLNSKSASVAKDKLAEISYEAVKSVAEL 186 (543)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECCTTHHHHHHHHHHHHHTTSGGGGGHHHHHHHHHHHHHHHEEE
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhccccccccHHHHHHHHHHHHHHhccc
Confidence 9999999999999999999999999999999999999874 789999999887663 68999999999984110
Q ss_pred cccccceeeeccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhcccccccccccccccccCCC
Q psy14622 158 VEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRFGP 237 (788)
Q Consensus 158 ~e~~d~~ILite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~~~~~ 237 (788)
-
T Consensus 187 ~------------------------------------------------------------------------------- 187 (543)
T 1a6d_B 187 R------------------------------------------------------------------------------- 187 (543)
T ss_dssp C-------------------------------------------------------------------------------
T ss_pred c-------------------------------------------------------------------------------
Confidence 0
Q ss_pred ccccccccceeecccccccCcccccccccccccccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeeccccCC
Q psy14622 238 EVRGLMLQGVDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDG 317 (788)
Q Consensus 238 ~~r~~~L~~~~i~~~~~~~tp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 317 (788)
.
T Consensus 188 ----------------------------------~--------------------------------------------- 188 (543)
T 1a6d_B 188 ----------------------------------D--------------------------------------------- 188 (543)
T ss_dssp ----------------------------------S---------------------------------------------
T ss_pred ----------------------------------c---------------------------------------------
Confidence 0
Q ss_pred cceeeEeeecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccccCCCCCchhhhhhhh
Q psy14622 318 EALSTLVVGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFIIELKL 397 (788)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (788)
|+..|
T Consensus 189 ------------------------------------------g~~~~--------------------------------- 193 (543)
T 1a6d_B 189 ------------------------------------------GKYYV--------------------------------- 193 (543)
T ss_dssp ------------------------------------------SSEEE---------------------------------
T ss_pred ------------------------------------------CCccc---------------------------------
Confidence 00000
Q ss_pred hHHHHHHHHHHhhhccCCCCcEEEe--cCCccceeEEEEEeeEecccccccccccccCCceeEeccceeeccccc-----
Q psy14622 398 VLEYYIQTYIYLCLKVGKEGVITVK--DGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESK----- 470 (788)
Q Consensus 398 ~~~~~~~~~~~~~~kvG~dGvItve--eg~~~~~~lev~eG~~fd~GylSpyfvt~~e~~~v~l~~p~ILitD~k----- 470 (788)
- --.|+|+ +|.+++++ ++++||.||+||.||||. ..++||+||++|.+
T Consensus 194 ----------------d-~~~I~V~k~~G~~~~ds-~lv~G~v~dk~~~~~~m~-------~~ien~kIll~~~~Le~~k 248 (543)
T 1a6d_B 194 ----------------D-FDNIQVVKKQGGAIDDT-QLINGIIVDKEKVHPGMP-------DVVKDAKIALLDAPLEIKK 248 (543)
T ss_dssp ----------------C-GGGEEEEEEESSCGGGC-EEESEEEESCCCSSTTSC-------SEEEEEEEEEESSCBSCCC
T ss_pred ----------------c-cceEEEEEecCCCccce-eEEccEEEecCCCCCCCc-------ceecCCeEEEEeccccccc
Confidence 0 0135665 77787766 999999999999999993 24789999999999
Q ss_pred --------ccchhhh-----------HHHHHHHHhcCCCeEEEecCCChhhHHhHHhhhcccccceeeecCCCCcchhhh
Q psy14622 471 --------ISSIQSI-----------IPALELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKA 531 (788)
Q Consensus 471 --------I~~i~~I-----------lP~Le~~~~~~rpLLIIAedi~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~~ 531 (788)
|++++++ .|.++.+.+.+.||||++++|+++||.+|+.|+ ++||+ +.|+.
T Consensus 249 ~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~------I~av~-----~v~k~ 317 (543)
T 1a6d_B 249 PEFDTNLRIEDPSMIQKFLAQEENMLREMVDKIKSVGANVVITQKGIDDMAQHYLSRAG------IYAVR-----RVKKS 317 (543)
T ss_dssp CSSEEEECCCSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHTT------CEEEC-----SCCHH
T ss_pred ccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEECCCcCHHHHHHHHHCC------eeEec-----cCCHH
Confidence 8888886 999999999999999999999999999999985 67774 56899
Q ss_pred hhhhhHhhhCCeEeccCCCCCcccccCcccccceeEEEEe---cCceEEEcCCCCHHHHHHHHHHHHHHHHhcCChHHHH
Q psy14622 532 TLQDLAVATGGIVFGDEASPVKLEDLQATDLGSVGEIVIT---KDDTLILKGKGKKEDIDRRADQIRDQIEATTSDYERE 608 (788)
Q Consensus 532 ~LeDiAilTGg~vis~~~~g~~l~~v~~~~LG~a~~V~vt---~d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~~~~~ 608 (788)
.|+|||.+|||++++ +++++++++||+|++|.+. +++++++.|.++
T Consensus 318 ~le~ia~~tGa~iis------~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~------------------------- 366 (543)
T 1a6d_B 318 DMDKLAKATGASIVS------TIDEISSSDLGTAERVEQVKVGEDYMTFVTGCKN------------------------- 366 (543)
T ss_dssp HHHHHHHHHTCCEES------CGGGCCGGGCEEEEEEEEEEETTEEEEEEEEESS-------------------------
T ss_pred HHHHHHHHhCCceec------ccccCCHHHCCCceEEEEEEecCceEEEEecCCC-------------------------
Confidence 999999999999997 5688999999999999875 889999998654
Q ss_pred HHHHHHHhhcCCeEEEEecCCchhhHHHHHHHHHHHHHHHHHHHHhc-cccCCchhHhhHHHHhhhhhc-cCccccCCCh
Q psy14622 609 KLQERLARLASGVAVLKVGGSSEVEVNEKKDRVTDALNATRAAVEEG-IVPGGGTALLRCIAVLDKLET-ANADQATGKK 686 (788)
Q Consensus 609 ~L~eRla~LsggvAvI~VGG~Te~EikErk~r~edAl~a~raA~e~G-iVpGGG~all~as~~L~~~~~-~~~~~~~G~~ 686 (788)
+++++|.+||+|+.+++|++++++||||++|+|+++| +|||||+++++++..|+++.. .+.+++.|
T Consensus 367 ----------~~~~TI~lrG~t~~~l~E~er~l~DAl~~~r~a~~~~~ivpGGGa~e~~~s~~L~~~~~~~~g~~q~~-- 434 (543)
T 1a6d_B 367 ----------PKAVSILVRGETEHVVDEMERSITDSLHVVASALEDGAYAAGGGATAAEIAFRLRSYAQKIGGRQQLA-- 434 (543)
T ss_dssp ----------SSCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHHTCSSHHHH--
T ss_pred ----------CceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHCCCccCCccHHHHHHHHHHHHHhhhcCChHHHH--
Confidence 5689999999999999999999999999999999999 999999999999999987642 12233333
Q ss_pred hhHHHHHHHHHHHHHhhcChhHHHHHHHHHHHhccCeEEEEecccHHHHHHHHhcchHHHHHHHhCCchHHHHHHHhcC-
Q psy14622 687 EDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVLES- 765 (788)
Q Consensus 687 ~~i~~r~~~l~~~~~~~~~~~d~~~l~eRla~Lsggvavi~vGa~~~e~~e~~~r~~~a~~a~~Aa~e~g~Vv~~~~~~- 765 (788)
++...++++.+.+++|.|||++...++.++++.
T Consensus 435 ----------------------------------------------i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h 468 (543)
T 1a6d_B 435 ----------------------------------------------IEKFADAIEEIPRALAENAGLDPIDILLKLRAEH 468 (543)
T ss_dssp ----------------------------------------------HHHHHHHHTHHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred ----------------------------------------------HHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 899999999999999999999999999999842
Q ss_pred ---CCCeeEEcCCCcccchhhcCC
Q psy14622 766 ---SGEMGYDAMNNEYVNMIQKVL 786 (788)
Q Consensus 766 ---~~~~Gyda~~~~~~dm~~~Gi 786 (788)
...+|||+.+|+|+||+++||
T Consensus 469 ~~~~~~~G~d~~~g~~~d~~~~gI 492 (543)
T 1a6d_B 469 AKGNKTYGINVFTGEIEDMVKNGV 492 (543)
T ss_dssp HTTCTTEEEETTTTEEEETTTTTC
T ss_pred hCCCCCeeEeCCCCcccchhhcCc
Confidence 247999999999999999997
No 18
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=100.00 E-value=1.8e-74 Score=658.66 Aligned_cols=407 Identities=23% Similarity=0.312 Sum_probs=355.6
Q ss_pred EeeccCCCCCcCCCCceeeeec-CCCCceEeeChHHhhccccccccccChhhHHHHHHhhhcccccCCCchhHHHHHHHH
Q psy14622 6 LEQSWGSPKITKDDGRNVILEQ-SWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAI 84 (788)
Q Consensus 6 i~~~~~S~kiLGPkG~nkmI~~-~~G~~~ITnDGvTIlk~I~l~d~~ehpgAkLl~e~A~~qd~evGDGTTTavVLA~aL 84 (788)
+++.++|+ |||+||||||++ ++|+|+|||||+||+|+|+++ ||+|||++++|++||+++||||||+||||++|
T Consensus 29 la~~vktt--LGPkG~~kml~~~~~G~~~iTnDG~tIlk~i~~~----hP~Akll~e~a~~qd~~~GDGTTtavVLA~~L 102 (527)
T 3p9d_B 29 VGDLVKST--LGPKGMDKLLQSASSNTCMVTNDGATILKSIPLD----NPAAKVLVNISKVQDDEVGDGTTSVTVLSAEL 102 (527)
T ss_dssp HHHHHHSC--SSSSCCEEEEECTTTCCEECCCCHHHHHHTCCCC----CHHHHHHHHHHHHHHHHTCSCTTTTTHHHHHH
T ss_pred HHHHHHhc--cCCCCCeEEEEecCCCCeEEeCCHHHHHHHhccC----CHHHHHHHHHHHHhHhhhCCcHhHHHHHHHHH
Confidence 34668899 999999999999 899999999999999999999 99999999999999999999999999999999
Q ss_pred HHHHHHHHhc-CCCchhHHHHHHHHHHHHHHHHHhcCCCCCC-----HHHHHHHHHhccCC------chHHhhHHHHHHH
Q psy14622 85 AKEGFEKISK-GANPIEIRRGVMLAVETIKTHLKELSKPVTT-----PEEIAQVATISANG------DKAVGELISDAMK 152 (788)
Q Consensus 85 L~eglklI~~-Gi~P~~I~~Gi~~A~~~ile~L~~ls~~V~d-----~eeL~~VA~tSan~------d~~Ig~LIadAv~ 152 (788)
+++|++++++ |+||+.|++||++|++.+++.|+++++++++ .++|.+||+||+++ ++.||+++++||.
T Consensus 103 l~ea~~lv~~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~l~~vA~tSl~sK~~~~~~~~i~~li~dAv~ 182 (527)
T 3p9d_B 103 LREAEKLIDQSKIHPQTIIEGYRLASAAALDALTKAAVDNSHDKTMFREDLIHIAKTTLSSKILSQDKDHFAELATNAIL 182 (527)
T ss_dssp HHHHHHHTC---CCHHHHHHHHHHHHHHHHHHHHHTCBCCCCCHHHHHHHHHHHHHHHHTTSGGGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhCccCCCcchhhHHHHHHHHHhccccCcccchHHHHHHHHHHHHH
Confidence 9999999999 9999999999999999999999999999885 78999999999998 4789999999998
Q ss_pred HhhhccccccceeeeccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhccccccccccccccc
Q psy14622 153 RVSAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKD 232 (788)
Q Consensus 153 kV~~~~e~~d~~ILite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~ 232 (788)
++
T Consensus 183 ~V------------------------------------------------------------------------------ 184 (527)
T 3p9d_B 183 RL------------------------------------------------------------------------------ 184 (527)
T ss_dssp TT------------------------------------------------------------------------------
T ss_pred Hh------------------------------------------------------------------------------
Confidence 73
Q ss_pred ccCCCccccccccceeecccccccCcccccccccccccccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeec
Q psy14622 233 VRFGPEVRGLMLQGVDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILA 312 (788)
Q Consensus 233 ~~~~~~~r~~~L~~~~i~~~~~~~tp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (788)
T Consensus 185 -------------------------------------------------------------------------------- 184 (527)
T 3p9d_B 185 -------------------------------------------------------------------------------- 184 (527)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCCcceeeEeeecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccccCCCCCchhh
Q psy14622 313 EDVDGEALSTLVVGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFI 392 (788)
Q Consensus 313 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (788)
T Consensus 185 -------------------------------------------------------------------------------- 184 (527)
T 3p9d_B 185 -------------------------------------------------------------------------------- 184 (527)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhhhHHHHHHHHHHhhhccCCCC---cEEEec--CCccceeEEEEEeeEecccccccccccccCCceeEeccceeecc
Q psy14622 393 IELKLVLEYYIQTYIYLCLKVGKEG---VITVKD--GKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLS 467 (788)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~kvG~dG---vItvee--g~~~~~~lev~eG~~fd~GylSpyfvt~~e~~~v~l~~p~ILit 467 (788)
|++| +|+|++ |.+..+ .++++||.||+||.||| +++ ++||+||++
T Consensus 185 ---------------------~~~~~~~~I~V~k~~gg~~~d-s~lv~G~~~dk~~~~~~----p~~----~~n~kIlll 234 (527)
T 3p9d_B 185 ---------------------KGSTNLEHIQIIKILGGKLSD-SFLDEGFILAKKFGNNQ----PKR----IENAKILIA 234 (527)
T ss_dssp ---------------------CTTCCTTSSCCCBCCCSSSSC-CCEESSCCCSCCCSSSC----CSC----CSSCEEEEE
T ss_pred ---------------------cccCCcceEEEEEcCCCCccc-cEEEEeEEEecccCCCC----Cee----eecceEEEe
Confidence 1122 344443 444444 58999999999999998 443 367888774
Q ss_pred ------------ccc--ccchhhh-----------HHHHHHHHhcCCCeEEEecCCChhhHHhHHhhhcccccceeeecC
Q psy14622 468 ------------ESK--ISSIQSI-----------IPALELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKA 522 (788)
Q Consensus 468 ------------D~k--I~~i~~I-----------lP~Le~~~~~~rpLLIIAedi~~eAL~~Lv~N~~rg~~~v~AVka 522 (788)
+.+ |++++++ .|.++.+.+.+.||+|++++|++.||.+|+.|+ ++|||.
T Consensus 235 ~~~le~~k~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~l~~I~~~g~~vvi~~~~I~~~al~~L~~~~------i~av~~ 308 (527)
T 3p9d_B 235 NTTLDTDKVKIFGTKFKVDSTAKLAQLEKAEREKMKNKIAKISKFGINTFINRQLIYDYPEQLFTDLG------INSIEH 308 (527)
T ss_dssp CSCSSCCCCSSCCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHTTTCCBEEESSCCCTTTHHHHHHHTC------BCCCCC
T ss_pred ccccccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHCC------CEEEec
Confidence 444 5566665 788999999999999999999999999999884 799999
Q ss_pred CCCcchhhhhhhhhHhhhCCeEeccCCCCCcccccCcccccceeEEE---EecCceEEEcCCCCHHHHHHHHHHHHHHHH
Q psy14622 523 PGFGDNRKATLQDLAVATGGIVFGDEASPVKLEDLQATDLGSVGEIV---ITKDDTLILKGKGKKEDIDRRADQIRDQIE 599 (788)
Q Consensus 523 P~fG~~R~~~LeDiAilTGg~vis~~~~g~~l~~v~~~~LG~a~~V~---vt~d~Ttii~g~g~~~~I~~R~~~l~~~~~ 599 (788)
|+|++ |++||..|||++++. +++++.++||+|++|. +++++++++.|.+
T Consensus 309 ~~~~d-----le~ia~~tGa~iv~~------~~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~----------------- 360 (527)
T 3p9d_B 309 ADFEG-----VERLALVTGGEVVST------FDEPSKCKLGECDVIEEIMLGEQPFLKFSGCK----------------- 360 (527)
T ss_dssp CHHHH-----HHHHHHHTCCCCCST------TSCCTTSCEECSBCCBCCCSSSCCBCCBCSSC-----------------
T ss_pred CCHHH-----HHHHHHHhCCEEecc------hhhCCHHHCCCCcEEEEEEecceEEEEEECCC-----------------
Confidence 97654 999999999999974 5778889999999997 7789999998854
Q ss_pred hcCChHHHHHHHHHHHhhcCCeEEEEecCCchhhHHHHHHHHHHHHHHHHHHHHhc-cccCCchhHhhHHHHhhhhhc-c
Q psy14622 600 ATTSDYEREKLQERLARLASGVAVLKVGGSSEVEVNEKKDRVTDALNATRAAVEEG-IVPGGGTALLRCIAVLDKLET-A 677 (788)
Q Consensus 600 ~~~s~~~~~~L~eRla~LsggvAvI~VGG~Te~EikErk~r~edAl~a~raA~e~G-iVpGGG~all~as~~L~~~~~-~ 677 (788)
++++++|.|||+|+.+++|++++++||||++|+|+++| +|||||+++++++..|+++.. .
T Consensus 361 ------------------~~~~~tI~lrg~te~~l~E~kr~i~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~ 422 (527)
T 3p9d_B 361 ------------------AGEACTIVLRGATDQTLDEAERSLHDALSVLSQTTKETRTVLGGGCAEMVMSKAVDTEAQNI 422 (527)
T ss_dssp ------------------CSCCEECBCCTTCTTHHHHHHTHHHHHHHHHHHHHHCCCEEETTTHHHHHHHHHHHHHHHHH
T ss_pred ------------------CCCEEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCcHHHHHHHHHHHHHHhcc
Confidence 36899999999999999999999999999999999999 999999999999999987542 1
Q ss_pred CccccCCChhhHHHHHHHHHHHHHhhcChhHHHHHHHHHHHhccCeEEEEecccHHHHHHHHhcchHHHHHHHhCCchHH
Q psy14622 678 NADQATGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSVEIVKKALRQPCMTIATNAGVDASV 757 (788)
Q Consensus 678 ~~~~~~G~~~~i~~r~~~l~~~~~~~~~~~d~~~l~eRla~Lsggvavi~vGa~~~e~~e~~~r~~~a~~a~~Aa~e~g~ 757 (788)
+.+++.| ++...++++.+.+++|.|||+++-.
T Consensus 423 ~g~eq~~------------------------------------------------i~~~a~ALe~ip~~La~NaG~d~~~ 454 (527)
T 3p9d_B 423 DGKKSLA------------------------------------------------VEAFARALRQLPTILADNAGFDSSE 454 (527)
T ss_dssp CSHHHHH------------------------------------------------HHHHHHHHHHHHHHHHHHHTSCSHH
T ss_pred CcHHHHH------------------------------------------------HHHHHHHHHHHHHHHHhccCCCHHH
Confidence 2233333 8999999999999999999999999
Q ss_pred HHHHHhcC----CCCeeEEcCCCcccchhhcCC
Q psy14622 758 VVNKVLES----SGEMGYDAMNNEYVNMIQKVL 786 (788)
Q Consensus 758 Vv~~~~~~----~~~~Gyda~~~~~~dm~~~Gi 786 (788)
|+.++++. +..+|||+.+|+|+||+++||
T Consensus 455 vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI 487 (527)
T 3p9d_B 455 LVSKLRSSIYNGISTSGLDLNNGTIADMRQLGI 487 (527)
T ss_dssp HHHHHHHHHHHTCSCCCCCSSSTTCCCHHHHTC
T ss_pred HHHHHHHHHhcCCCceeEECCCCCCcchHhccC
Confidence 99999763 356899999999999999997
No 19
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=100.00 E-value=4.8e-73 Score=651.12 Aligned_cols=422 Identities=24% Similarity=0.317 Sum_probs=364.0
Q ss_pred EeeccCCCCCcCCCCceeeeecCCCCceEeeChHHhhccccccccccChhhHHHHHHhhhcccccCCCchhHHHHHHHHH
Q psy14622 6 LEQSWGSPKITKDDGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIA 85 (788)
Q Consensus 6 i~~~~~S~kiLGPkG~nkmI~~~~G~~~ITnDGvTIlk~I~l~d~~ehpgAkLl~e~A~~qd~evGDGTTTavVLA~aLL 85 (788)
+++.++|+ |||+||||||++++|+|+|||||+||+|+|+++ ||+|||++++|++||+++||||||+||||++|+
T Consensus 57 la~~vktt--LGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~----hP~Akll~e~a~~qd~e~GDGTTtvvVLA~~LL 130 (562)
T 3p9d_E 57 VASIIKTS--LGPRGLDKILISPDGEITITNDGATILSQMELD----NEIAKLLVQLSKSQDDEIGDGTTGVVVLASALL 130 (562)
T ss_dssp HHHHTTTS--SSTTCCEEEEECSSSCEEEESCHHHHHHHSCCC----SHHHHHHHHHHHHHHHHTSSCTTHHHHHHHHHH
T ss_pred HHHHHHhc--cCCCCCeEEEEcCCCCEEEECCHHHHHHHccCC----CHHHHHHHHHHHHHHhhcCCCcccHHHHHHHHH
Confidence 35678999 999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhcCCCCCC------HHHHHHHHHhccCCc------hHHhhHHHHHHHH
Q psy14622 86 KEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVTT------PEEIAQVATISANGD------KAVGELISDAMKR 153 (788)
Q Consensus 86 ~eglklI~~Gi~P~~I~~Gi~~A~~~ile~L~~ls~~V~d------~eeL~~VA~tSan~d------~~Ig~LIadAv~k 153 (788)
++|++++++|+||+.|++||++|++.+++.|+++++|+++ +++|.+||+||++++ +.|++++++|+.+
T Consensus 131 ~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~e~L~~vA~tSl~sK~i~~~~d~la~l~vdAV~~ 210 (562)
T 3p9d_E 131 DQALELIQKGIHPIKIANGFDEAAKLAISKLEETCDDISASNDELFRDFLLRAAKTSLGSKIVSKDHDRFAEMAVEAVIN 210 (562)
T ss_dssp HHHHHHHTTTCCHHHHHHHHHHHHHHHHHHTTTTTSSSSBCCCSSCHHHHHHHHHHHHSSSTTTTTHHHHHHHHHHHHHT
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccCcCCCcchhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHhee
Confidence 9999999999999999999999999999999999999863 278999999999985 3566777777765
Q ss_pred hhhccccccceeeeccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhcccccccccccccccc
Q psy14622 154 VSAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDV 233 (788)
Q Consensus 154 V~~~~e~~d~~ILite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~ 233 (788)
+.+
T Consensus 211 V~~----------------------------------------------------------------------------- 213 (562)
T 3p9d_E 211 VMD----------------------------------------------------------------------------- 213 (562)
T ss_dssp SST-----------------------------------------------------------------------------
T ss_pred ecc-----------------------------------------------------------------------------
Confidence 210
Q ss_pred cCCCccccccccceeecccccccCcccccccccccccccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeecc
Q psy14622 234 RFGPEVRGLMLQGVDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAE 313 (788)
Q Consensus 234 ~~~~~~r~~~L~~~~i~~~~~~~tp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (788)
.. .++
T Consensus 214 --~~-~~~------------------------------------------------------------------------ 218 (562)
T 3p9d_E 214 --KD-RKD------------------------------------------------------------------------ 218 (562)
T ss_dssp --TT-CSC------------------------------------------------------------------------
T ss_pred --cc-cCC------------------------------------------------------------------------
Confidence 00 000
Q ss_pred ccCCcceeeEeeecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccccCCCCCchhhh
Q psy14622 314 DVDGEALSTLVVGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFII 393 (788)
Q Consensus 314 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (788)
T Consensus 219 -------------------------------------------------------------------------------- 218 (562)
T 3p9d_E 219 -------------------------------------------------------------------------------- 218 (562)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhhHHHHHHHHHHhhhccCCCCcEEEec--CCccceeEEEEEeeEeccccccccccccc-------CCceeEecccee
Q psy14622 394 ELKLVLEYYIQTYIYLCLKVGKEGVITVKD--GKTLTDELEVIEGMKFDRGYISPYFINTA-------KGAKVEFQDALV 464 (788)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~kvG~dGvItvee--g~~~~~~lev~eG~~fd~GylSpyfvt~~-------e~~~v~l~~p~I 464 (788)
+. -+.|.|+. |.+++++ ++++||.||+||.||||+++. +.+.+.|+.||.
T Consensus 219 -------------------~d-~~~I~I~k~~Ggs~~ds-~lveGmv~dk~~~sp~m~~~~~~~~~~~~~kIall~~~le 277 (562)
T 3p9d_E 219 -------------------VD-FDLIKMQGRVGGSISDS-KLINGVILDKDFSHPQMPKCVLPKEGSDGVKLAILTCPFE 277 (562)
T ss_dssp -------------------CC-CCCCEEEEESSSCGGGC-EEESSEEESSCCCTTSCCC-----TTCSSCEECEEESCCS
T ss_pred -------------------CC-cccEEEEEecCCChhhh-ceeeeEEEecCCCCCCcCcccccccccccceEEEeccccc
Confidence 00 02233433 6667765 899999999999999999987 667778999999
Q ss_pred eccc-----ccccchhh-----------hHHHHHHHHhcCCCeEEEecCCChhhHHhHHhhhcccccceeeecCCCCcch
Q psy14622 465 LLSE-----SKISSIQS-----------IIPALELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDN 528 (788)
Q Consensus 465 LitD-----~kI~~i~~-----------IlP~Le~~~~~~rpLLIIAedi~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~ 528 (788)
+..+ .+|+++++ +.|+++.+.+.+.||||++++|+++||.+|+.|++.+ |+.|
T Consensus 278 ~~k~~~~~~~~Iss~~~~~~~~~~E~~~l~~~lekI~~~g~~vvI~~~~I~~~Al~~L~~~~I~~------v~~v----- 346 (562)
T 3p9d_E 278 PPKPKTKHKLDISSVEEYQKLQTYEQDKFKEMIDDVKKAGADVVICQWGFDDEANHLLLQNDLPA------VRWV----- 346 (562)
T ss_dssp SCCCSSCCCCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHTCSCCEECSSCCSHHHHHHHTTTCCC------EECC-----
T ss_pred ccccccCceEEECCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCHHHHHHHHHCCCEE------Eecc-----
Confidence 9866 68899888 7899999999999999999999999999999998864 4444
Q ss_pred hhhhhhhhHhhhCCeEeccCCCCCcccccCcccccceeEEEE-----ecCceEEEcCCCCHHHHHHHHHHHHHHHHhcCC
Q psy14622 529 RKATLQDLAVATGGIVFGDEASPVKLEDLQATDLGSVGEIVI-----TKDDTLILKGKGKKEDIDRRADQIRDQIEATTS 603 (788)
Q Consensus 529 R~~~LeDiAilTGg~vis~~~~g~~l~~v~~~~LG~a~~V~v-----t~d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s 603 (788)
++..|+|||.+|||++++ +++++++++||+|++|.+ ++++++++.|.+++
T Consensus 347 ~k~~le~ia~~TGa~iis------~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~i~g~~~~------------------- 401 (562)
T 3p9d_E 347 GGQELEHIAISTNGRIVP------RFQDLSKDKLGTCSRIYEQEFGTTKDRMLIIEQSKET------------------- 401 (562)
T ss_dssp CTTTHHHHHHHHCCCEEE------SSSCCCTTSCEECSCEEEECCSSSSCCEEEECCCSCC-------------------
T ss_pred CHHHHHHHHHHhCCEEEe------ccccCCHHHCCcceEEEEEEeccCCceEEEEecCCCC-------------------
Confidence 577899999999999998 468889999999999998 68999999987663
Q ss_pred hHHHHHHHHHHHhhcCCeEEEEecCCchhhHHHHHHHHHHHHHHHHHHHHhc-cccCCchhHhhHHHHhhhhhcc-Cccc
Q psy14622 604 DYEREKLQERLARLASGVAVLKVGGSSEVEVNEKKDRVTDALNATRAAVEEG-IVPGGGTALLRCIAVLDKLETA-NADQ 681 (788)
Q Consensus 604 ~~~~~~L~eRla~LsggvAvI~VGG~Te~EikErk~r~edAl~a~raA~e~G-iVpGGG~all~as~~L~~~~~~-~~~~ 681 (788)
+.++|.+||+|+.+++|++++++||||++|+|+++| +|||||+++++++..|+.+... +.++
T Consensus 402 ----------------~~~TIllrG~te~~l~E~kr~i~DAL~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~e 465 (562)
T 3p9d_E 402 ----------------KTVTCFVRGSNKMIVDEAERALHDSLCVVRNLVKDSRVVYGGGAAEVTMSLAVSEEADKQRGID 465 (562)
T ss_dssp ----------------SCCEEEEECTTTTTHHHHTHHHHHHHHHHHHHHHSCCEEETTTHHHHHHHHHHHHHHHTTCTTH
T ss_pred ----------------CeEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCCcHHHHHHHHHHHHHhccCccHH
Confidence 246899999999999999999999999999999999 9999999999999999875422 2233
Q ss_pred cCCChhhHHHHHHHHHHHHHhhcChhHHHHHHHHHHHhccCeEEEEecccHHHHHHHHhcchHHHHHHHhCCchHHHHHH
Q psy14622 682 ATGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNK 761 (788)
Q Consensus 682 ~~G~~~~i~~r~~~l~~~~~~~~~~~d~~~l~eRla~Lsggvavi~vGa~~~e~~e~~~r~~~a~~a~~Aa~e~g~Vv~~ 761 (788)
+.| ++...++++.+.+++|.|||+++..|+.+
T Consensus 466 q~~------------------------------------------------i~~~a~ALe~ip~~La~NaG~d~~~vv~~ 497 (562)
T 3p9d_E 466 QYA------------------------------------------------FRGFAQALDTIPMTLAENSGLDPIGTLST 497 (562)
T ss_dssp HHH------------------------------------------------HHHHHHHHTHHHHHHHHTTTSCHHHHHHH
T ss_pred HHH------------------------------------------------HHHHHHHHHHHHHHHHHhcCCCHHHHHHH
Confidence 333 89999999999999999999999999999
Q ss_pred Hhc-----CCCCeeEEcCCCcccchhhcCC
Q psy14622 762 VLE-----SSGEMGYDAMNNEYVNMIQKVL 786 (788)
Q Consensus 762 ~~~-----~~~~~Gyda~~~~~~dm~~~Gi 786 (788)
+++ ....+|||+.+|+|+||+++||
T Consensus 498 l~~~h~~~~~~~~G~d~~~g~~~dm~~~gI 527 (562)
T 3p9d_E 498 LKSKQLKEKISNIGVDCLGYGSNDMKELFV 527 (562)
T ss_dssp HHHHHHHTTTSSBCCBTTTTBCCBTTTTTC
T ss_pred HHHHHhhcCCCceeEecCCCcccchHhccC
Confidence 975 2357899999999999999997
No 20
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=100.00 E-value=5.7e-73 Score=649.03 Aligned_cols=417 Identities=19% Similarity=0.266 Sum_probs=359.7
Q ss_pred EeeccCCCCCcCCCCceeeeecCCCCceEeeChHHhhccccccccccChhhHHHHHHhhhcccccCCCchhHHHHHHHHH
Q psy14622 6 LEQSWGSPKITKDDGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIA 85 (788)
Q Consensus 6 i~~~~~S~kiLGPkG~nkmI~~~~G~~~ITnDGvTIlk~I~l~d~~ehpgAkLl~e~A~~qd~evGDGTTTavVLA~aLL 85 (788)
+++.++|+ |||+||||||++++|+|+|||||+||+|+|+++ ||+|||++++|++||+++||||||+||||++|+
T Consensus 36 la~~vktt--LGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~----hP~Akll~e~a~~qd~e~GDGTTtvvVLA~~Ll 109 (550)
T 3p9d_G 36 VQEALKPT--LGPLGSDILIVTSNQKTTISNDGATILKLLDVV----HPAAKTLVDISRAQDAEVGDGTTSVTILAGELM 109 (550)
T ss_dssp HHTTTGGG--STTTCCCEEEECSSSCEEEECCHHHHTTTSCCC----SHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHH
T ss_pred HHHHHHhc--cCCCCCcEEEECCCCCeEEECCHHHHHHHccCC----CHHHHHHHHHHHHhhhhhCCCceehHHHHHHHH
Confidence 45678888 999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhcCCCCC--C---HHHHHHHHHhccCC------chHHhhHHHHHHHHh
Q psy14622 86 KEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVT--T---PEEIAQVATISANG------DKAVGELISDAMKRV 154 (788)
Q Consensus 86 ~eglklI~~Gi~P~~I~~Gi~~A~~~ile~L~~ls~~V~--d---~eeL~~VA~tSan~------d~~Ig~LIadAv~kV 154 (788)
++|++++++|+||+.|++||++|++.+++.|+++++|++ + .++|.+||+||+++ +++||+++++||.++
T Consensus 110 ~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V 189 (550)
T 3p9d_G 110 KEAKPFLEEGISSHLIMKGYRKAVSLAVEKINELAVDITSEKSSGRELLERCARTAMSSKLIHNNADFFVKMCVDAVLSL 189 (550)
T ss_dssp HTTSHHHHSSSCTTHHHHHHHHHHHHHHHHHHHSEECCCCC------CHHHHHHHHHHHTTTGGGHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCcchhHHHHHHHHHHhccCccccccHhHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999986 3 67899999999876 478999999999983
Q ss_pred hhccccccceeeeccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhccccccccccccccccc
Q psy14622 155 SAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVR 234 (788)
Q Consensus 155 ~~~~e~~d~~ILite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~~ 234 (788)
++
T Consensus 190 ~~------------------------------------------------------------------------------ 191 (550)
T 3p9d_G 190 DR------------------------------------------------------------------------------ 191 (550)
T ss_dssp CS------------------------------------------------------------------------------
T ss_pred Cc------------------------------------------------------------------------------
Confidence 10
Q ss_pred CCCccccccccceeecccccccCcccccccccccccccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeeccc
Q psy14622 235 FGPEVRGLMLQGVDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAED 314 (788)
Q Consensus 235 ~~~~~r~~~L~~~~i~~~~~~~tp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (788)
+ +++
T Consensus 192 --~--------~~d------------------------------------------------------------------ 195 (550)
T 3p9d_G 192 --N--------DLD------------------------------------------------------------------ 195 (550)
T ss_dssp --S--------SCC------------------------------------------------------------------
T ss_pred --c--------ccC------------------------------------------------------------------
Confidence 0 000
Q ss_pred cCCcceeeEeeecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccccCCCCCchhhhh
Q psy14622 315 VDGEALSTLVVGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFIIE 394 (788)
Q Consensus 315 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (788)
T Consensus 196 -------------------------------------------------------------------------------- 195 (550)
T 3p9d_G 196 -------------------------------------------------------------------------------- 195 (550)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhHHHHHHHHHHhhhccCCCCcEEEecCCccceeEEEEEeeEecccccccccccccCCceeEeccceeeccccc----
Q psy14622 395 LKLVLEYYIQTYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESK---- 470 (788)
Q Consensus 395 ~~~~~~~~~~~~~~~~~kvG~dGvItveeg~~~~~~lev~eG~~fd~GylSpyfvt~~e~~~v~l~~p~ILitD~k---- 470 (788)
+..-|+++++ |.+++|+ ++++||.||+||+||||++.+++ ++||+||++|.+
T Consensus 196 ------------------l~~I~Vikv~-Gg~~~ds-~lv~G~~~dk~~~s~yf~~~~~~----~en~kIll~~~~Le~~ 251 (550)
T 3p9d_G 196 ------------------DKLIGIKKIP-GGAMEES-LFINGVAFKKTFSYAGFEQQPKK----FNNPKILSLNVELELK 251 (550)
T ss_dssp ------------------GGGCCCCBCC-SSCGGGC-CCCSSEEECCCSSCTTCSCSCSC----CSSCCEEEECSCCSCC
T ss_pred ------------------chheeEEEec-CCCccce-eEEeeEEEeccccccccccCccc----ccCceEEEeccccccc
Confidence 0012455565 6677777 89999999999999999998876 899999999998
Q ss_pred ---------ccchhhhHH-----------HHHHHHhcCCCeEEEecCCChhhHHhHHhhhcccccceeeecCCCCcchhh
Q psy14622 471 ---------ISSIQSIIP-----------ALELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRK 530 (788)
Q Consensus 471 ---------I~~i~~IlP-----------~Le~~~~~~rpLLIIAedi~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~ 530 (788)
|++++++.| .++.+.+.+.+|+|+.++|++.++..|.. +|.+. |++.|+
T Consensus 252 k~e~~~~v~is~~~~l~~il~~E~~~l~~~v~~I~~~g~~vVi~~~~I~dla~~~L~~---~gI~~--------v~~v~k 320 (550)
T 3p9d_G 252 AEKDNAEVRVEHVEDYQAIVDAEWQLIFEKLRQVEETGANIVLSKLPIGDLATQFFAD---RNIFC--------AGRVSA 320 (550)
T ss_dssp CCSSCEEEEECSSSHHHHHHHHHHHHHHHHHHHHHTTTCSEEEESSCCCHHHHHTTGG---GTCEE--------EECCCT
T ss_pred cccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccHHHHHHHHH---cCCcc--------ccCcCH
Confidence 667778777 55667788999999999999866665553 34432 356688
Q ss_pred hhhhhhHhhhCCeEeccCCCCCcccccCcccccceeEEEE---ecCceEEEcCCCCHHHHHHHHHHHHHHHHhcCChHHH
Q psy14622 531 ATLQDLAVATGGIVFGDEASPVKLEDLQATDLGSVGEIVI---TKDDTLILKGKGKKEDIDRRADQIRDQIEATTSDYER 607 (788)
Q Consensus 531 ~~LeDiAilTGg~vis~~~~g~~l~~v~~~~LG~a~~V~v---t~d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~~~~ 607 (788)
..|++||..|||++++ ++++++.++||+|++|.+ .+++++++.|.++
T Consensus 321 ~~lerIa~~tGa~iis------~l~~l~~~~LG~a~~v~~~~ig~e~~~~~~g~~~------------------------ 370 (550)
T 3p9d_G 321 DDMNRVIQAVGGSIQS------TTSDIKPEHLGTCALFEEMQIGSERYNLFQGCPQ------------------------ 370 (550)
T ss_dssp THHHHHHHHTCCCCBS------SGGGCCGGGCCCCSBCCCCCCSSSCCEEEBCCTT------------------------
T ss_pred HHHHHHHHHhCCceec------chhhCCHHHcCCceEEEEEEeCCeEEEEEecCCC------------------------
Confidence 9999999999999997 468899999999999976 6788888888654
Q ss_pred HHHHHHHHhhcCCeEEEEecCCchhhHHHHHHHHHHHHHHHHHHHHhc-cccCCchhHhhHHHHhhhhh-ccCccccCCC
Q psy14622 608 EKLQERLARLASGVAVLKVGGSSEVEVNEKKDRVTDALNATRAAVEEG-IVPGGGTALLRCIAVLDKLE-TANADQATGK 685 (788)
Q Consensus 608 ~~L~eRla~LsggvAvI~VGG~Te~EikErk~r~edAl~a~raA~e~G-iVpGGG~all~as~~L~~~~-~~~~~~~~G~ 685 (788)
+++++|.+||+|+.+++|++++++||||++|+|+++| +|||||+++++++..|+++. +.+.+++.|
T Consensus 371 -----------~~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~- 438 (550)
T 3p9d_G 371 -----------AKTCTLLLRGGAEQVIAEVERSLHDAIMIVKRALQNKLIVAGGGATEMEVSKCLRDYSKTIAGKQQMI- 438 (550)
T ss_dssp -----------CCCCCCCBCSSSHHHHHHHHHHHHHHHHHHHHHHHSCCEEETTTHHHHHHHHHHHHHHHTCCSTTHHH-
T ss_pred -----------CceeEEEEeCCcHHHHHHHHHHHHhHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhhcCChHHHHH-
Confidence 3579999999999999999999999999999999999 99999999999999998753 223344444
Q ss_pred hhhHHHHHHHHHHHHHhhcChhHHHHHHHHHHHhccCeEEEEecccHHHHHHHHhcchHHHHHHHhCCchHHHHHHHhcC
Q psy14622 686 KEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVLES 765 (788)
Q Consensus 686 ~~~i~~r~~~l~~~~~~~~~~~d~~~l~eRla~Lsggvavi~vGa~~~e~~e~~~r~~~a~~a~~Aa~e~g~Vv~~~~~~ 765 (788)
++...++++.+.+++|.|||+++..|+.++++.
T Consensus 439 -----------------------------------------------i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~ 471 (550)
T 3p9d_G 439 -----------------------------------------------INAFAKALEVIPRQLCENAGFDAIEILNKLRLA 471 (550)
T ss_dssp -----------------------------------------------HHHHHHHHTHHHHHHHHTSCSCHHHHHHHHHHH
T ss_pred -----------------------------------------------HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Confidence 899999999999999999999999999999752
Q ss_pred ----CCCeeEEcCCCcccchhhcCC
Q psy14622 766 ----SGEMGYDAMNNEYVNMIQKVL 786 (788)
Q Consensus 766 ----~~~~Gyda~~~~~~dm~~~Gi 786 (788)
...+|||+.+|+|+||+++||
T Consensus 472 h~~~~~~~G~d~~~g~~~dm~~~gI 496 (550)
T 3p9d_G 472 HSKGEKWYGVVFETENIGDNFAKFV 496 (550)
T ss_dssp HHHSCSCCCBCSSSSSBCCHHHHTC
T ss_pred HhcCCCceeeeCCCCcccchHhccC
Confidence 346899999999999999997
No 21
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.1e-71 Score=634.42 Aligned_cols=421 Identities=22% Similarity=0.331 Sum_probs=350.2
Q ss_pred EeeccCCCCCcCCCCceeeeecCCCCceEeeChHHhhccccccccccChhhHHHHHHhhhcccccCCCchhHHHHHHHHH
Q psy14622 6 LEQSWGSPKITKDDGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIA 85 (788)
Q Consensus 6 i~~~~~S~kiLGPkG~nkmI~~~~G~~~ITnDGvTIlk~I~l~d~~ehpgAkLl~e~A~~qd~evGDGTTTavVLA~aLL 85 (788)
+++.++|+ |||+||||||++++|+|+|||||+||+++|+++ ||+|||++++|++||+++||||||++|||++|+
T Consensus 22 la~~vktt--lGPkG~~kml~~~~g~~~iTnDG~tIlk~i~v~----hp~akll~~~a~~qd~e~GDGTTtvvvLa~~Ll 95 (517)
T 3iyg_Z 22 LQDVLRTN--LGPKGTMKMLVSGAGDIKLTKDGNVLLHEMQIQ----HPTASLIAKVATAQDDITGDGTTSNVLIIGELL 95 (517)
T ss_pred HHHHHHhc--cCCCCCeEEEECCCCCEEEECCHHHHHHHccCc----CHHHHHHHHHHHHHHHHhCCCceeHHHHHHHHH
Confidence 35678899 999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhcCCCCC-CHHHHHHHHHhccCCchHHhhHHHHHHHHhhhccccccce
Q psy14622 86 KEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVT-TPEEIAQVATISANGDKAVGELISDAMKRVSAKVEFQDAL 164 (788)
Q Consensus 86 ~eglklI~~Gi~P~~I~~Gi~~A~~~ile~L~~ls~~V~-d~eeL~~VA~tSan~d~~Ig~LIadAv~kV~~~~e~~d~~ 164 (788)
++|++++++|+||+.|++||++|++.+++.|+++++|++ +.++|.+||+||++++ ++..++++|.++
T Consensus 96 ~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~L~~va~tsl~sK--i~~~~~d~la~l---------- 163 (517)
T 3iyg_Z 96 KQADLYISEGLHPRIITEGFEAAKEKALQFLEQVKVSKEMDRETLIDVARTSLRTK--VHAELADVLTEA---------- 163 (517)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhhCcCCCCCHHHHHHHHHHHhccc--cchhHHHHHHHH----------
Confidence 999999999999999999999999999999999999988 8899999999999885 455555555542
Q ss_pred eeeccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhcccccccccccccccccCCCccccccc
Q psy14622 165 VLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRFGPEVRGLML 244 (788)
Q Consensus 165 ILite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~~~~~~~r~~~L 244 (788)
T Consensus 164 -------------------------------------------------------------------------------- 163 (517)
T 3iyg_Z 164 -------------------------------------------------------------------------------- 163 (517)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cceeecccccccCcccccccccccccccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeeccccCCcceeeEe
Q psy14622 245 QGVDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLV 324 (788)
Q Consensus 245 ~~~~i~~~~~~~tp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 324 (788)
T Consensus 164 -------------------------------------------------------------------------------- 163 (517)
T 3iyg_Z 164 -------------------------------------------------------------------------------- 163 (517)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccccCCCCCchhhhhhhhhHHHHHH
Q psy14622 325 VGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFIIELKLVLEYYIQ 404 (788)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (788)
+.|+++++++++. +-|.+
T Consensus 164 --------------------------------~vdaV~~V~~~~~--------------------------~~dl~---- 181 (517)
T 3iyg_Z 164 --------------------------------VVDSILAIKKQDE--------------------------PIDLF---- 181 (517)
T ss_pred --------------------------------HHHHhheeccCCC--------------------------cCChh----
Confidence 0111112211100 00000
Q ss_pred HHHHhhhccCCCCcEEEecCCccceeEEEEEeeEecccccccccccccCCceeEeccceeecccccc-------------
Q psy14622 405 TYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESKI------------- 471 (788)
Q Consensus 405 ~~~~~~~kvG~dGvItveeg~~~~~~lev~eG~~fd~GylSpyfvt~~e~~~v~l~~p~ILitD~kI------------- 471 (788)
++.+.+. .| +..++.++++||.||+||.|||| ...++||+||++|.+|
T Consensus 182 -~I~I~k~----------~G-g~~~ds~lv~G~v~dk~~~~p~m-------~~~ien~kIll~~~~le~~k~e~~~~~~i 242 (517)
T 3iyg_Z 182 -MVEIMEM----------KH-KSETDTSLIRGLVLDHGARHPDM-------KKRVEDAYILTCNVSLEYEKTEVNSGFFY 242 (517)
T ss_pred -Hheeeee----------cC-CCccccceEeeEEEeccCCCCCc-------cccccCCeEEEecccccccccccceeEEe
Confidence 0010111 12 23456789999999999999995 4578999999999987
Q ss_pred ------------------cchhhhHHHHHHHHh-cCCCeEEEe-cCCChhhHHhHHhhhcccccceeeecCCCCcchhhh
Q psy14622 472 ------------------SSIQSIIPALELANS-KRKPLVILA-EDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKA 531 (788)
Q Consensus 472 ------------------~~i~~IlP~Le~~~~-~~rpLLIIA-edi~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~~ 531 (788)
+.+++|+|+++.+++ .++|||||+ ++|++.||.+|..+ |. .+|+.. ++.
T Consensus 243 ~~~~~l~~~~~~E~~~i~~~v~~I~~~~~~v~~~~~~~lvIi~~~~I~d~al~~L~~~---gI---~~v~~v-----~~~ 311 (517)
T 3iyg_Z 243 KSAEEREKLVKAERKFIEDRVKKIIELKKKVCGDSDKGFVVINQKGIDPFSLDALAKE---GI---IALRRA-----KRR 311 (517)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCceEEEecccCCHHHHHHHHHC---CC---EEEEec-----CHH
Confidence 357788998887754 689999997 89999999999876 44 444443 466
Q ss_pred hhhhhHhhhCCeEeccCCCCCcccccCccc-ccceeEE---EEecCceEEEcCCCCHHHHHHHHHHHHHHHHhcCChHHH
Q psy14622 532 TLQDLAVATGGIVFGDEASPVKLEDLQATD-LGSVGEI---VITKDDTLILKGKGKKEDIDRRADQIRDQIEATTSDYER 607 (788)
Q Consensus 532 ~LeDiAilTGg~vis~~~~g~~l~~v~~~~-LG~a~~V---~vt~d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~~~~ 607 (788)
.|+|||.+|||++++ +++++++++ ||+|+ | ++++++++++.|.+++..
T Consensus 312 ~leria~~tGa~iv~------~l~~l~~~~~LG~a~-v~e~~ig~~~~~~~~g~~~~~~--------------------- 363 (517)
T 3iyg_Z 312 NMERLTLACGGIALN------SLDDLNPDCLLGHAG-VYEYTLGEEKFTFIEKCNNPRS--------------------- 363 (517)
T ss_pred HHHHHHHHhCCEEec------chhhCcccccCCcce-EEEEEEcCceEEEEeCCCCchh---------------------
Confidence 799999999999997 468889999 99999 9 789999999999876543
Q ss_pred HHHHHHHHhhcCCeEEEEecCCchhhHHHHHHHHHHHHHHHHHHHHhc-cccCCchhHhhHHHHhhhhhcc-CccccCCC
Q psy14622 608 EKLQERLARLASGVAVLKVGGSSEVEVNEKKDRVTDALNATRAAVEEG-IVPGGGTALLRCIAVLDKLETA-NADQATGK 685 (788)
Q Consensus 608 ~~L~eRla~LsggvAvI~VGG~Te~EikErk~r~edAl~a~raA~e~G-iVpGGG~all~as~~L~~~~~~-~~~~~~G~ 685 (788)
++|.|||+|+.+++|++++++||||++|+|+++| +|||||+++++++..|+.+... +.+++.|
T Consensus 364 --------------~TI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~- 428 (517)
T 3iyg_Z 364 --------------VTLLIKGPNKHTLTQIKDAIRDGLRAVKNAIDDGCVVPGAGAVEVAMAEALVKYKPSVKGRAQLG- 428 (517)
T ss_pred --------------heeeecCCcHHHHHHHHHHHHHHHHHHHHHHhcceEecCccHHHHHHHHHHHHHhccCCHHHHHH-
Confidence 6799999999999999999999999999999999 9999999999999999876432 3334333
Q ss_pred hhhHHHHHHHHHHHHHhhcChhHHHHHHHHHHHhccCeEEEEecccHHHHHHHHhcchHHHHHHHhCCchHHHHHHHhcC
Q psy14622 686 KEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVLES 765 (788)
Q Consensus 686 ~~~i~~r~~~l~~~~~~~~~~~d~~~l~eRla~Lsggvavi~vGa~~~e~~e~~~r~~~a~~a~~Aa~e~g~Vv~~~~~~ 765 (788)
++...+++++.++++|.|||+++..|+.++++.
T Consensus 429 -----------------------------------------------i~~~a~ALe~iP~~La~NaG~d~~~~v~~l~~~ 461 (517)
T 3iyg_Z 429 -----------------------------------------------VQAFADALLIIPKVLAQNSGFDLQETLVKVQAE 461 (517)
T ss_pred -----------------------------------------------HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 899999999555999999999999999999753
Q ss_pred ----CCCeeEEcCCCcccchhhcCC
Q psy14622 766 ----SGEMGYDAMNNEYVNMIQKVL 786 (788)
Q Consensus 766 ----~~~~Gyda~~~~~~dm~~~Gi 786 (788)
+..+|||+.+|+|+||+++||
T Consensus 462 h~~~~~~~G~d~~~g~~~d~~~~gI 486 (517)
T 3iyg_Z 462 HSESGQLVGVDLNTGEPMVAAEAGI 486 (517)
T ss_pred HhcCCCcEEEeCCCCcccchhhccC
Confidence 346899999999999999997
No 22
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.6e-70 Score=626.28 Aligned_cols=423 Identities=22% Similarity=0.281 Sum_probs=361.9
Q ss_pred EeeccCCCCCcCCCCceeeeecCCCCceEeeChHHhhccccccccccChhhHHHHHHhhhcccccCCCchhHHHHHHHHH
Q psy14622 6 LEQSWGSPKITKDDGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIA 85 (788)
Q Consensus 6 i~~~~~S~kiLGPkG~nkmI~~~~G~~~ITnDGvTIlk~I~l~d~~ehpgAkLl~e~A~~qd~evGDGTTTavVLA~aLL 85 (788)
+++.++|+ |||+||||||++++|+|+|||||+||+++|+++ ||+|||++++|++||+++||||||+||||++|+
T Consensus 22 la~~v~tt--lGP~G~~kml~~~~g~~~iTnDG~tIlk~i~v~----hP~akll~~~a~~qd~e~GDGTTtvvvLA~eLL 95 (529)
T 3iyg_A 22 IANIVKSS--LGPVGLDKMLVDDIGDVTITNDGATILKLLEVE----HPAAKVLCELADLQDKEVGDGTTSVVIIAAELL 95 (529)
T ss_pred HHHHHHhc--cCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccC----ChHHHHHHHHHHHhhhhhCCChhhHHHHHHHHH
Confidence 35678899 999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHh-cCCCCC--CHHHHHHHHHhccCC------chHHhhHHHHHHHHhhh
Q psy14622 86 KEGFEKISKGANPIEIRRGVMLAVETIKTHLKE-LSKPVT--TPEEIAQVATISANG------DKAVGELISDAMKRVSA 156 (788)
Q Consensus 86 ~eglklI~~Gi~P~~I~~Gi~~A~~~ile~L~~-ls~~V~--d~eeL~~VA~tSan~------d~~Ig~LIadAv~kV~~ 156 (788)
++|++++++|+||+.|++||++|++.+++.|++ ++++++ ++++|.+||+||+++ +++||+++++||.++++
T Consensus 96 ~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~~~~e~l~~va~tsl~sK~~~~~~~~i~~livdAv~~V~~ 175 (529)
T 3iyg_A 96 KNADELVKQKIHPTSVISGYRLACKEAVRYISENLIINTDELGRDCLINAAKTSMSSKVIGINGDFFANLVVDAVLAIKY 175 (529)
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHhccCcccccHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999 999987 789999999999976 47899999999998411
Q ss_pred ccccccceeeeccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhcccccccccccccccccCC
Q psy14622 157 KVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRFG 236 (788)
Q Consensus 157 ~~e~~d~~ILite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~~~~ 236 (788)
.
T Consensus 176 ~------------------------------------------------------------------------------- 176 (529)
T 3iyg_A 176 T------------------------------------------------------------------------------- 176 (529)
T ss_pred h-------------------------------------------------------------------------------
Confidence 0
Q ss_pred CccccccccceeecccccccCcccccccccccccccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeeccccC
Q psy14622 237 PEVRGLMLQGVDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVD 316 (788)
Q Consensus 237 ~~~r~~~L~~~~i~~~~~~~tp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 316 (788)
+ +
T Consensus 177 ~---------------------------------~--------------------------------------------- 178 (529)
T 3iyg_A 177 D---------------------------------I--------------------------------------------- 178 (529)
T ss_pred c---------------------------------c---------------------------------------------
Confidence 0 0
Q ss_pred CcceeeEeeecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccccCCCCCchhhhhhh
Q psy14622 317 GEALSTLVVGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFIIELK 396 (788)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (788)
+|..+.|
T Consensus 179 ------------------~g~~~~d------------------------------------------------------- 185 (529)
T 3iyg_A 179 ------------------RGQPRYP------------------------------------------------------- 185 (529)
T ss_pred ------------------CCCcccc-------------------------------------------------------
Confidence 0000000
Q ss_pred hhHHHHHHHHHHhhhccCCCCcEEEec--CCccceeEEEEEeeEecccccccccccccCCceeEeccceeecccccc---
Q psy14622 397 LVLEYYIQTYIYLCLKVGKEGVITVKD--GKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESKI--- 471 (788)
Q Consensus 397 ~~~~~~~~~~~~~~~kvG~dGvItvee--g~~~~~~lev~eG~~fd~GylSpyfvt~~e~~~v~l~~p~ILitD~kI--- 471 (788)
+ ..|+|++ |.++. +.++++||.||+||.||||++ .++||+|+++|..+
T Consensus 186 ----------------v---~~I~I~k~~G~~~~-ds~lv~G~v~dk~~~~~~m~~-------~ien~kIlll~~~le~~ 238 (529)
T 3iyg_A 186 ----------------V---NSINVLKAHGRSQM-ESMLINGYALNCVVGSQGMPK-------RIVNAKIACLDFSLQKT 238 (529)
T ss_pred ----------------c---ceEEEEEecCCCcc-ceEEEeeeEEecCcccccCCc-------ccCCceEEEecCCcccc
Confidence 0 0144433 33443 468999999999999999975 46789999998854
Q ss_pred ----------------cchhh-----hHHHHHHHHhcCCCeEEEecCCChhhHHhHHhhhcccccceeeecCCCCcchhh
Q psy14622 472 ----------------SSIQS-----IIPALELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRK 530 (788)
Q Consensus 472 ----------------~~i~~-----IlP~Le~~~~~~rpLLIIAedi~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~ 530 (788)
+.+.+ +.|.++.+.+.+.||||++++|+++||.+|+.|+ ++||| +.|+
T Consensus 239 k~e~~~~v~i~~~~~~~~i~~~E~~~l~~~v~kI~~~g~nvvi~~~~I~d~al~~L~~~g------I~av~-----~v~k 307 (529)
T 3iyg_A 239 KMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAG------AMAVR-----RVLK 307 (529)
T ss_pred cccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcC------Cceec-----cCCH
Confidence 33332 8889999999999999999999999999999995 67776 3588
Q ss_pred hhhhhhHhhhCCeEeccCCCCCc-ccccCcccccceeEEE---EecCceEEEcCCCCHHHHHHHHHHHHHHHHhcCChHH
Q psy14622 531 ATLQDLAVATGGIVFGDEASPVK-LEDLQATDLGSVGEIV---ITKDDTLILKGKGKKEDIDRRADQIRDQIEATTSDYE 606 (788)
Q Consensus 531 ~~LeDiAilTGg~vis~~~~g~~-l~~v~~~~LG~a~~V~---vt~d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~~~ 606 (788)
..|+|||.+|||+++++. .+.. +++++.++||+|++|. +++++++++.|.+++
T Consensus 308 ~~leria~~tGa~iv~~~-~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~---------------------- 364 (529)
T 3iyg_A 308 RDLKRIAKASGATVLSTL-ANLEGEETFEASMLGQAEEVVQERICDDELILIKNTKAR---------------------- 364 (529)
T ss_pred HHHHHHHHHhCCeeecch-hcccchhccChhhCccceEEEEEEeCCceEEEEEcCCCC----------------------
Confidence 999999999999999977 4444 4678889999999997 899999999987653
Q ss_pred HHHHHHHHHhhcCCeEEEEecCCchhhHHHHHHHHHHHHHHHHHHHHhc-cccCCchhHhhHHHHhhhhhcc-CccccCC
Q psy14622 607 REKLQERLARLASGVAVLKVGGSSEVEVNEKKDRVTDALNATRAAVEEG-IVPGGGTALLRCIAVLDKLETA-NADQATG 684 (788)
Q Consensus 607 ~~~L~eRla~LsggvAvI~VGG~Te~EikErk~r~edAl~a~raA~e~G-iVpGGG~all~as~~L~~~~~~-~~~~~~G 684 (788)
++++|.++|+|+.+++|++++++||||++|+|+++| +|||||+++++++.+|+++... ..+++.|
T Consensus 365 -------------~~~TI~lrG~t~~~l~E~er~l~Dal~v~r~~v~~~~iVpGGGa~E~~ls~~L~~~~~~~~g~eq~~ 431 (529)
T 3iyg_A 365 -------------TSASVILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYATSMGSREQLA 431 (529)
T ss_pred -------------ceEEEEECCchHHHHHHHHHHHHHHHHHHHHHhhCCeEEeCCcHHHHHHHHHHHHHhhhcCChHHHH
Confidence 479999999999999999999999999999999999 9999999999999999875422 2222222
Q ss_pred ChhhHHHHHHHHHHHHHhhcChhHHHHHHHHHHHhccCeEEEEecccHHHHHHHHhcchHHHHHHHhCCchHHHHHHHhc
Q psy14622 685 KKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVLE 764 (788)
Q Consensus 685 ~~~~i~~r~~~l~~~~~~~~~~~d~~~l~eRla~Lsggvavi~vGa~~~e~~e~~~r~~~a~~a~~Aa~e~g~Vv~~~~~ 764 (788)
++...++++.+.+++|.|||++...++.++++
T Consensus 432 ------------------------------------------------i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~ 463 (529)
T 3iyg_A 432 ------------------------------------------------IAEFARSLLVIPNTLAVNAAQDSTDLVAKLRA 463 (529)
T ss_pred ------------------------------------------------HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 88999999999999999999999999999975
Q ss_pred C----C--------CCeeEEcCCCcccchhhcCC
Q psy14622 765 S----S--------GEMGYDAMNNEYVNMIQKVL 786 (788)
Q Consensus 765 ~----~--------~~~Gyda~~~~~~dm~~~Gi 786 (788)
. . ..+|||+.+|+|+||+++||
T Consensus 464 ~h~~~~~~~~~~~~~~~G~d~~~g~~~d~~~~gV 497 (529)
T 3iyg_A 464 FHNEAQVNPERKNLKWIGLDLVNGKPRDNKQAGV 497 (529)
T ss_pred HHhccccccccccCceeeeeCCCCCccChhhccC
Confidence 2 1 35899999999999999997
No 23
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=100.00 E-value=8.7e-72 Score=638.94 Aligned_cols=417 Identities=23% Similarity=0.316 Sum_probs=343.7
Q ss_pred EeeccCCCCCcCCCCceeeeecCCCCceEeeChHHhhccccccccccChhhHHHHHHhhhcccccCCCchhHHHHHHHHH
Q psy14622 6 LEQSWGSPKITKDDGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIA 85 (788)
Q Consensus 6 i~~~~~S~kiLGPkG~nkmI~~~~G~~~ITnDGvTIlk~I~l~d~~ehpgAkLl~e~A~~qd~evGDGTTTavVLA~aLL 85 (788)
+++.++|+ |||+||||||++++|+|+|||||+||+++|+++ ||+|+|++++|++||+++||||||+||||++|+
T Consensus 29 la~~vktt--LGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~----hP~akll~e~a~~qd~e~GDGTTtvvVLA~eLL 102 (546)
T 3p9d_F 29 LQSVLETN--LGPKGTLKMLVDGAGNIKLTKDGKVLLTEMQIQ----SPTAVLIARAAAAQDEITGDGTTTVVCLVGELL 102 (546)
T ss_dssp HHHHHTTT--SSTTCCEEEEECTTSCEEEECCHHHHHHTSCCC----CHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHH
T ss_pred HHHHHHhc--cCCCCCeEEEECCCCCEEEECCHHHHHHHccCc----CHHHHHHHHHHHHHHHHhCCCcccHHHHHHHHH
Confidence 35678999 999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhcCCCC----CCHHHHHHHHHhccCCc------hHHhhHHHHHHHHhh
Q psy14622 86 KEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPV----TTPEEIAQVATISANGD------KAVGELISDAMKRVS 155 (788)
Q Consensus 86 ~eglklI~~Gi~P~~I~~Gi~~A~~~ile~L~~ls~~V----~d~eeL~~VA~tSan~d------~~Ig~LIadAv~kV~ 155 (788)
++|++++++|+||+.|++||++|++.+++.|+++++++ .+.++|.+||+||++++ +.|++++++|+..+.
T Consensus 103 ~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~~~L~~vA~tsl~sKi~~~~~d~la~l~vdaV~~V~ 182 (546)
T 3p9d_F 103 RQAHRFIQEGVHPRIITDGFEIARKESMKFLDEFKISKTNLSNDREFLLQVARSSLLTKVDADLTEVLTPIVTDAVLSVY 182 (546)
T ss_dssp HHHHHHTTTTBCHHHHHHHHHHHHHHHHHHHHHHCCCCSSSSTTCHHHHHHHHHHTCSTTHHHHCSSHHHHHHHHHHHTH
T ss_pred HHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHhhccccccccCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhheEee
Confidence 99999999999999999999999999999999999998 47889999999999875 345666666666521
Q ss_pred hccccccceeeeccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhcccccccccccccccccC
Q psy14622 156 AKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRF 235 (788)
Q Consensus 156 ~~~e~~d~~ILite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~~~ 235 (788)
+.
T Consensus 183 ~~------------------------------------------------------------------------------ 184 (546)
T 3p9d_F 183 DA------------------------------------------------------------------------------ 184 (546)
T ss_dssp HH------------------------------------------------------------------------------
T ss_pred cC------------------------------------------------------------------------------
Confidence 00
Q ss_pred CCccccccccceeecccccccCcccccccccccccccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeecccc
Q psy14622 236 GPEVRGLMLQGVDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDV 315 (788)
Q Consensus 236 ~~~~r~~~L~~~~i~~~~~~~tp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (788)
+ -.+.+++.+.+
T Consensus 185 -~-~~~~dl~~I~i------------------------------------------------------------------ 196 (546)
T 3p9d_F 185 -Q-ADNLDLHMVEI------------------------------------------------------------------ 196 (546)
T ss_dssp -H-HTTCCGGGEEE------------------------------------------------------------------
T ss_pred -C-CCcccchheEE------------------------------------------------------------------
Confidence 0 00001111111
Q ss_pred CCcceeeEeeecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccccCCCCCchhhhhh
Q psy14622 316 DGEALSTLVVGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFIIEL 395 (788)
Q Consensus 316 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (788)
T Consensus 197 -------------------------------------------------------------------------------- 196 (546)
T 3p9d_F 197 -------------------------------------------------------------------------------- 196 (546)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhHHHHHHHHHHhhhccCCCCcEEEecCCccceeEEEEEeeEecccccccccccccCCceeEeccceeeccccccc---
Q psy14622 396 KLVLEYYIQTYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESKIS--- 472 (788)
Q Consensus 396 ~~~~~~~~~~~~~~~~kvG~dGvItveeg~~~~~~lev~eG~~fd~GylSpyfvt~~e~~~v~l~~p~ILitD~kI~--- 472 (788)
+. ..| +..++.++++||.||+||.||+ |..+++||+||++|.+|+
T Consensus 197 -----------------------~k-i~G-g~~~ds~lv~G~v~dk~~~~~~-------m~~~~en~kIll~~~~Le~~k 244 (546)
T 3p9d_F 197 -----------------------MQ-MQH-LSPKDTTFIKGLVLDHGGRHPD-------MPTRVKNAYVLILNVSLEYEK 244 (546)
T ss_dssp -----------------------EC-CCC-SCTTTCCCCSSCEESCCCCSSS-------SCSSBCSCCCCEECCCSSSCC
T ss_pred -----------------------EE-ecC-CCccccEEEeeEEEeccccccc-------CcceecCceEEEecCcccccc
Confidence 00 012 2233457899999999999996 455789999999985542
Q ss_pred ----------------------------chhhhHHHHHHHHh--cCCCeEEEec-CCChhhHHhHHhhhcccccceeeec
Q psy14622 473 ----------------------------SIQSIIPALELANS--KRKPLVILAE-DVDGEALSTLVVNRLKIGLQVAAVK 521 (788)
Q Consensus 473 ----------------------------~i~~IlP~Le~~~~--~~rpLLIIAe-di~~eAL~~Lv~N~~rg~~~v~AVk 521 (788)
.+++|+|+++.+++ +++|+|||++ +|+++||.+|+.|++ .+||
T Consensus 245 ~e~~~~~~i~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~v~~~~~g~~~vIi~~k~I~~~Al~~L~~~gI------~~vr 318 (546)
T 3p9d_F 245 TEVNSGFFYSSADQRDKLAASERKFVDAKLKKIIDLKNEVCGMDPDKGFVIINQKGIDPMSLDVFAKHNI------LALR 318 (546)
T ss_dssp CSSCBCCCCCSSSCHHHHHHHHHHHHHHHHHHHHHCC-----------CEEEESSCCCHHHHHHHTTTTC------EEEC
T ss_pred cccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCceEEEecCcCcHHHHHHHHHCCC------eeEe
Confidence 46778888887776 7899999986 999999999999965 5666
Q ss_pred CCCCcchhhhhhhhhHhhhCCeEeccCCCCCcccccCcccccceeEE---EEecCceEEEcCCCCHHHHHHHHHHHHHHH
Q psy14622 522 APGFGDNRKATLQDLAVATGGIVFGDEASPVKLEDLQATDLGSVGEI---VITKDDTLILKGKGKKEDIDRRADQIRDQI 598 (788)
Q Consensus 522 aP~fG~~R~~~LeDiAilTGg~vis~~~~g~~l~~v~~~~LG~a~~V---~vt~d~Ttii~g~g~~~~I~~R~~~l~~~~ 598 (788)
.. ++..|+|||.+|||++++ +++++++++||+|++| .+++++++++.|.+++.
T Consensus 319 ~v-----~~~~leria~~tGa~ii~------~l~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~------------- 374 (546)
T 3p9d_F 319 RA-----KRRNMERLQLVTGGEAQN------SVEDLSPQILGFSGLVYQETIGEEKFTYVTENTDPK------------- 374 (546)
T ss_dssp CC-----CHHHHHHHHHTTTBCCCC------CCSSCSTTCCBCCCCBCBCCCSSCCCEECSSCSCCS-------------
T ss_pred cC-----CHHHHHHHHHHhCCEEec------chhhCCHhHCCcccEEEEEEecCceEEEEecCCCCc-------------
Confidence 54 466899999999999997 4688899999999999 78999999999987754
Q ss_pred HhcCChHHHHHHHHHHHhhcCCeEEEEecCCchhhHHHHHHHHHHHHHHHHHHHHhc-cccCCchhHhhHHHHhhhh---
Q psy14622 599 EATTSDYEREKLQERLARLASGVAVLKVGGSSEVEVNEKKDRVTDALNATRAAVEEG-IVPGGGTALLRCIAVLDKL--- 674 (788)
Q Consensus 599 ~~~~s~~~~~~L~eRla~LsggvAvI~VGG~Te~EikErk~r~edAl~a~raA~e~G-iVpGGG~all~as~~L~~~--- 674 (788)
.++|.|||+|+.+++|++++++||||++|+|+++| +|||||+++++++..|+.+
T Consensus 375 ----------------------~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~ 432 (546)
T 3p9d_F 375 ----------------------SCTILIKGSTHYALAQTKDAVRDGLRAVANVLKDKNIIPGAGAFYIALSRYLRSANMN 432 (546)
T ss_dssp ----------------------CEEEECCCSCHHHHHHHHHHHHHHHHHHHHHTTSCCEEETTTHHHHHHHHHHHHHHTT
T ss_pred ----------------------eEEEEECCCCHHHHHHHHHHHHHHHHHHHHHhcCCcEEeCCCHHHHHHHHHHHhhhhh
Confidence 38999999999999999999999999999999999 9999999999999999862
Q ss_pred h-ccCccccCCChhhHHHHHHHHHHHHHhhcChhHHHHHHHHHHHhccCeEEEEecccHHHHHHHHhcchHHHHHHHhCC
Q psy14622 675 E-TANADQATGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSVEIVKKALRQPCMTIATNAGV 753 (788)
Q Consensus 675 ~-~~~~~~~~G~~~~i~~r~~~l~~~~~~~~~~~d~~~l~eRla~Lsggvavi~vGa~~~e~~e~~~r~~~a~~a~~Aa~ 753 (788)
. +.+.+++.| ++...++++.+.+++|.|||+
T Consensus 433 ~~~~~g~eq~~------------------------------------------------i~~~a~ALe~ip~~La~NaG~ 464 (546)
T 3p9d_F 433 KLGAKGKTKTG------------------------------------------------IEAFAEALLVIPKTLVKNSGF 464 (546)
T ss_dssp TTTTTSHHHHH------------------------------------------------HHHHHHHHHHHHHHHHTTTCC
T ss_pred hhcCchHHHHH------------------------------------------------HHHHHHHHHHHHHHHHHHcCC
Confidence 2 223333333 899999999999999999999
Q ss_pred chHHHHHHHhc---------CCCCeeEEcCCCcccchhhcCC
Q psy14622 754 DASVVVNKVLE---------SSGEMGYDAMNNEYVNMIQKVL 786 (788)
Q Consensus 754 e~g~Vv~~~~~---------~~~~~Gyda~~~~~~dm~~~Gi 786 (788)
++..|+.++++ .+..+|||+.+|+|+||+++||
T Consensus 465 d~~~~v~~l~~~h~~~~~~~~~~~~G~d~~~g~~~d~~~~gI 506 (546)
T 3p9d_F 465 DPLDVLAMVEDELDDAQDSDETRYVGVDLNIGDSCDPTIEGI 506 (546)
T ss_dssp TTTTCCHHHHHHHHHHTTSTTSSCCCCBTTTTBCCCSGGGTC
T ss_pred CHHHHHHHHHHHhhhhhcccCCceeeEeCCCCeecchHhccC
Confidence 99999999874 2346899999999999999997
No 24
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=100.00 E-value=1.4e-68 Score=606.75 Aligned_cols=402 Identities=23% Similarity=0.347 Sum_probs=305.6
Q ss_pred eeecCCCCceEeeChHHhhccccccccccChhhHHHHHHhhhcccccCCCchhHHHHHHHHHHHHHHHHhcCCCchhHHH
Q psy14622 24 ILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIAKEGFEKISKGANPIEIRR 103 (788)
Q Consensus 24 mI~~~~G~~~ITnDGvTIlk~I~l~d~~ehpgAkLl~e~A~~qd~evGDGTTTavVLA~aLL~eglklI~~Gi~P~~I~~ 103 (788)
||++++|+|+|||||+||+|+|+++ ||+|||++++|++||+++||||||+||||++|++++++++++|+||+.|++
T Consensus 1 mlv~~~G~~~iTnDG~tIlk~i~v~----hP~Akll~e~a~~qd~e~GDGTTtvvvLa~~LL~~a~~ll~~GihP~~I~~ 76 (500)
T 3aq1_B 1 MLVDSMGDIVITNDGATILKEMDIQ----HPAAKMIVEVSKTQDAEVGDGTTTAAVLSGELLSKAEELIMKGVHSTIISE 76 (500)
T ss_dssp ----------------------------------------------CCHHHHHHHHHHHHHHHHHHHHHTTTCCHHHHHH
T ss_pred CccCCCCCeEEECcHHHHHHhCcCC----CHHHHHHHHHHHhhhhhhCCChHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 6889999999999999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCC--CHHHHHHHHHhccCC------chHHhhHHHHHHHHhhhccccccceeeeccccchhh
Q psy14622 104 GVMLAVETIKTHLKELSKPVT--TPEEIAQVATISANG------DKAVGELISDAMKRVSAKVEFQDALVLLSESKISSI 175 (788)
Q Consensus 104 Gi~~A~~~ile~L~~ls~~V~--d~eeL~~VA~tSan~------d~~Ig~LIadAv~kV~~~~e~~d~~ILite~ki~~i 175 (788)
||++|++.+++.|+++++|++ +.++|.+||+||+++ ++.|++++++||.++++.
T Consensus 77 G~~~A~~~a~~~L~~~s~~v~~~d~~~l~~va~tsl~sKi~~~~~~~i~~li~dAv~~v~~~------------------ 138 (500)
T 3aq1_B 77 GYRHAAEKCREILETITIAISPDDEAALIKIAGTAITGKGAEAYKEKLSALTVKAVRSIVEE------------------ 138 (500)
T ss_dssp HHHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHTTCCSSSTTSSHHHHHHHHHHHHTTSEEC------------------
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHhhcccccccHHHHHHHHHHHHHHhccc------------------
Confidence 999999999999999999986 489999999988765 478999999999873100
Q ss_pred hhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhcccccccccccccccccCCCccccccccceeecccccc
Q psy14622 176 QSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRFGPEVRGLMLQGVDILADAMY 255 (788)
Q Consensus 176 q~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~~~~~~~r~~~L~~~~i~~~~~~ 255 (788)
.
T Consensus 139 ---------------------------------------------------------------~---------------- 139 (500)
T 3aq1_B 139 ---------------------------------------------------------------E---------------- 139 (500)
T ss_dssp ---------------------------------------------------------------C----------------
T ss_pred ---------------------------------------------------------------c----------------
Confidence 0
Q ss_pred cCcccccccccccccccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeeccccCCcceeeEeeecccceeecC
Q psy14622 256 RLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVVGKEGVITVKD 335 (788)
Q Consensus 256 ~tp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 335 (788)
T Consensus 140 -------------------------------------------------------------------------------- 139 (500)
T 3aq1_B 140 -------------------------------------------------------------------------------- 139 (500)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccccCCCCCchhhhhhhhhHHHHHHHHHHhhhccCC
Q psy14622 336 GKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFIIELKLVLEYYIQTYIYLCLKVGK 415 (788)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kvG~ 415 (788)
+|++.+ | .
T Consensus 140 -----------------------~g~~~~---------------------------------d----------------i 147 (500)
T 3aq1_B 140 -----------------------EDGLKV---------------------------------N----------------V 147 (500)
T ss_dssp -----------------------SSSCEE---------------------------------C----------------H
T ss_pred -----------------------cCCccc---------------------------------c----------------c
Confidence 000000 0 0
Q ss_pred CCcEEEe--cCCccceeEEEEEeeEecccccccccccccCCceeEeccceeeccccc-------------ccchhhh---
Q psy14622 416 EGVITVK--DGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESK-------------ISSIQSI--- 477 (788)
Q Consensus 416 dGvItve--eg~~~~~~lev~eG~~fd~GylSpyfvt~~e~~~v~l~~p~ILitD~k-------------I~~i~~I--- 477 (788)
...|+|+ +|.+++ +.++++||.||+||.||||. ..++||+||++|.+ |++++++
T Consensus 148 ~~~I~V~k~~G~~~~-ds~lv~G~v~dk~~~~~~m~-------~~i~n~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~ 219 (500)
T 3aq1_B 148 LENIKIEKRAGGSID-DSELIDGLVIDKERSHPNMP-------EKVENAKILLLSCPVEFRKTEVDSEIKITSPGQMQLF 219 (500)
T ss_dssp HHHEEEEEEESSCGG-GCEEESEEEESCCCSSTTSC-------SEEEEEEEEEESSCBCC--------------------
T ss_pred cccEEEEEecCCCcc-ceEEEeeeEEeecCCCCCCc-------ccccCCEEEEEeCCccccccccceeEeeCCHHHHHHH
Confidence 0125565 677774 67999999999999999992 26889999999999 7888886
Q ss_pred --------HHHHHHHHhcCCCeEEEecCCChhhHHhHHhhhcccccceeeecCCCCcchhhhhhhhhHhhhCCeEeccCC
Q psy14622 478 --------IPALELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATLQDLAVATGGIVFGDEA 549 (788)
Q Consensus 478 --------lP~Le~~~~~~rpLLIIAedi~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~~~LeDiAilTGg~vis~~~ 549 (788)
.|.++.+.+.+.||||++++|+++||.+|+.|+ ++||+ +.|+..|+|||.+|||++++
T Consensus 220 ~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~------I~av~-----~~~k~~le~ia~~tGa~iis--- 285 (500)
T 3aq1_B 220 LDQEEKMMREMAEKVIASGANVVFCQKGIDDMAQYYIEKAG------IYAVR-----RVKKSDLKRLSKVTGATIIQ--- 285 (500)
T ss_dssp -----CHHHHHHHHHHTTCCSEEEESSCBCHHHHHHHHHTT------CEEEC-----SCCHHHHHHHHHHHCCCCBS---
T ss_pred HHHHHHHHHHHHHHHHHhCcCEEEECCCcCHHHHHHHHHCC------EEEEE-----eCCHHHHHHHHHHhCCeEec---
Confidence 999999999999999999999999999999985 67774 67899999999999999997
Q ss_pred CCCcccccCcccccceeEEEEe---cCceEEEcCCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHhhcCCeEEEEe
Q psy14622 550 SPVKLEDLQATDLGSVGEIVIT---KDDTLILKGKGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKV 626 (788)
Q Consensus 550 ~g~~l~~v~~~~LG~a~~V~vt---~d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~~~~~~L~eRla~LsggvAvI~V 626 (788)
+++++++++||+|++|.+. +++++++.|.++ +++++|.+
T Consensus 286 ---~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~~-----------------------------------~~~~TI~l 327 (500)
T 3aq1_B 286 ---DLDQITTEDVGTAGLVEEKEVRGGKMTYVTGCQN-----------------------------------SKAVTVLL 327 (500)
T ss_dssp ---CTTCCCSTTCEEEEEEEEEECSSSEEEEEEEETT-----------------------------------CCCEEEEE
T ss_pred ---ccccCCHhHCCCceEEEEEEecCeEEEEEECCCC-----------------------------------CceEEEEe
Confidence 4688889999999999886 899999998654 67899999
Q ss_pred cCCchhhHHHHHHHHHHHHHHHHHHHHhc-cccCCchhHhhHHHHhhhhhc-cCccccCCChhhHHHHHHHHHHHHHhhc
Q psy14622 627 GGSSEVEVNEKKDRVTDALNATRAAVEEG-IVPGGGTALLRCIAVLDKLET-ANADQATGKKEDIDRRADQIRDQIEATT 704 (788)
Q Consensus 627 GG~Te~EikErk~r~edAl~a~raA~e~G-iVpGGG~all~as~~L~~~~~-~~~~~~~G~~~~i~~r~~~l~~~~~~~~ 704 (788)
||+|+.+++|++++++||||++|+|+++| +|||||+++++++..|+++.. .+.+++.|
T Consensus 328 rG~t~~~l~E~er~l~Dal~~~r~~~~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~-------------------- 387 (500)
T 3aq1_B 328 HGGTEHVVDSLDHALNDALHVVGVVIEDGKVVVGGGSSEVELSLRLSEYASTLKGREQLA-------------------- 387 (500)
T ss_dssp EESSHHHHHHHHHHHHHHHHHHHHHHHHSEEEETTTHHHHHHHHHHHHHHHTCCSHHHHH--------------------
T ss_pred cCCcHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHHHHhhhcCchHHHH--------------------
Confidence 99999999999999999999999999999 999999999999999987642 12222222
Q ss_pred ChhHHHHHHHHHHHhccCeEEEEecccHHHHHHHHhcchHHHHHHHhCCchHHHHHHHhcC----CCCeeEEcCCCcccc
Q psy14622 705 SDYEREKLQERLARLASGVAVLKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVLES----SGEMGYDAMNNEYVN 780 (788)
Q Consensus 705 ~~~d~~~l~eRla~Lsggvavi~vGa~~~e~~e~~~r~~~a~~a~~Aa~e~g~Vv~~~~~~----~~~~Gyda~~~~~~d 780 (788)
++...++++.+.+++|.|||++...++.++++. ...+|||+.+|+|+|
T Consensus 388 ----------------------------i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d 439 (500)
T 3aq1_B 388 ----------------------------VSKFAEALEVIPVALAENAGLDPIDIMVELRSQHEKGNKNAGLNVYTGEVVD 439 (500)
T ss_dssp ----------------------------HHHHHHHTTHHHHHHHHHTTCCHHHHHHHHHHHHHTTCTTEEECTTTCCEEE
T ss_pred ----------------------------HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhcCCCCCeeEeCCCCCccc
Confidence 899999999999999999999999999999842 247999999999999
Q ss_pred hhhcCC
Q psy14622 781 MIQKVL 786 (788)
Q Consensus 781 m~~~Gi 786 (788)
|+++||
T Consensus 440 ~~~~gI 445 (500)
T 3aq1_B 440 MWENDV 445 (500)
T ss_dssp TTTTTC
T ss_pred hHhcCC
Confidence 999997
No 25
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2.8e-67 Score=597.97 Aligned_cols=417 Identities=19% Similarity=0.282 Sum_probs=348.7
Q ss_pred EeeccCCCCCcCCCCceeeeecCCCCceEeeChHHhhccccccccccChhhHHHHHHhhhcccccCCCchhHHHHHHHHH
Q psy14622 6 LEQSWGSPKITKDDGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIA 85 (788)
Q Consensus 6 i~~~~~S~kiLGPkG~nkmI~~~~G~~~ITnDGvTIlk~I~l~d~~ehpgAkLl~e~A~~qd~evGDGTTTavVLA~aLL 85 (788)
+++.++|+ |||+||||||++++|+|+|||||+||+++|+++ ||.|||++++|++||+++||||||+||||++|+
T Consensus 21 la~~vktt--LGP~G~~kml~~~~G~~~iTnDG~tIlk~i~v~----hP~Akll~e~a~~qd~e~GDGTTtvvvLAgeLL 94 (515)
T 3iyg_G 21 IADIIRTC--LGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQ----HPAAKSMIEISRTQDEEVGDGTTSVIILAGEML 94 (515)
T ss_pred HHHHHhcC--cCCCCCeEEEECCCCCeEEECCHHHHHHhcccC----CHHHHHHHHHHHHhhhhhCCChhhHHHHHHHHH
Confidence 45678999 999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhcCCCCC--CHHHHHHHHHhccCCc------hHHhhHHHHHHHHhhhc
Q psy14622 86 KEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPVT--TPEEIAQVATISANGD------KAVGELISDAMKRVSAK 157 (788)
Q Consensus 86 ~eglklI~~Gi~P~~I~~Gi~~A~~~ile~L~~ls~~V~--d~eeL~~VA~tSan~d------~~Ig~LIadAv~kV~~~ 157 (788)
++|++++++|+||+.|++||++|++.+++.|+++++|++ +.+.|.++|++|++++ ..+++++++|+..+.+
T Consensus 95 ~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~l~~va~tsl~sK~i~~~~~~~~~i~vdav~~V~~- 173 (515)
T 3iyg_G 95 SVAEHFLEQQMHPTVVISAYRKALDDMISTLKKISIPVDTSNRDTMLNIINSSITTKVISRWSSLACNIALDAVKTVQF- 173 (515)
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHhccc-
Confidence 999999999999999999999999999999999999987 4789999999999765 2334455555544200
Q ss_pred cccccceeeeccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhcccccccccccccccccCCC
Q psy14622 158 VEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRFGP 237 (788)
Q Consensus 158 ~e~~d~~ILite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~~~~~ 237 (788)
+
T Consensus 174 -------------------------------------------------------------------------------~ 174 (515)
T 3iyg_G 174 -------------------------------------------------------------------------------E 174 (515)
T ss_pred -------------------------------------------------------------------------------c
Confidence 0
Q ss_pred ccccccccceeecccccccCcccccccccccccccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeeccccCC
Q psy14622 238 EVRGLMLQGVDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDG 317 (788)
Q Consensus 238 ~~r~~~L~~~~i~~~~~~~tp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 317 (788)
+
T Consensus 175 ------------------------------------------------~------------------------------- 175 (515)
T 3iyg_G 175 ------------------------------------------------E------------------------------- 175 (515)
T ss_pred ------------------------------------------------c-------------------------------
Confidence 0
Q ss_pred cceeeEeeecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccccCCCCCchhhhhhhh
Q psy14622 318 EALSTLVVGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFIIELKL 397 (788)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (788)
+|.+++|
T Consensus 176 -----------------~~~~~~d-------------------------------------------------------- 182 (515)
T 3iyg_G 176 -----------------NGRKEID-------------------------------------------------------- 182 (515)
T ss_pred -----------------CCCcccc--------------------------------------------------------
Confidence 0000000
Q ss_pred hHHHHHHHHHHhhhccCCCCcEEEe--cCCccceeEEEEEeeEecccccccccccccCCceeEeccceeecccc------
Q psy14622 398 VLEYYIQTYIYLCLKVGKEGVITVK--DGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSES------ 469 (788)
Q Consensus 398 ~~~~~~~~~~~~~~kvG~dGvItve--eg~~~~~~lev~eG~~fd~GylSpyfvt~~e~~~v~l~~p~ILitD~------ 469 (788)
.+-.|.|+ .|.+.+ +.++++||.||+||.||+| ...++||+||++|.
T Consensus 183 -----------------l~~~I~I~ki~Ggs~~-ds~lv~G~v~dk~~~~~~m-------~~~ien~kIll~~~~Le~~k 237 (515)
T 3iyg_G 183 -----------------IKKYARVEKIPGGIIE-DSCVLRGVMINKDVTHPRM-------RRYIKNPRIVLLDSSLEYKK 237 (515)
T ss_pred -----------------hhheeEEEEecCCCcc-cceEEeeEEEeCCCCCCCC-------cceeeeeEEEEEcccccccc
Confidence 00012221 344553 5689999999999999965 45789999999999
Q ss_pred -------cccchhhhHHHHH-----------HHHhcCCCeEEEec-CCChhhHHhHHhhhcccccceeeecCCCCcchhh
Q psy14622 470 -------KISSIQSIIPALE-----------LANSKRKPLVILAE-DVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRK 530 (788)
Q Consensus 470 -------kI~~i~~IlP~Le-----------~~~~~~rpLLIIAe-di~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~ 530 (788)
+|++++++.|+++ .+.+. +|.|||++ .|++.|+..|.-+ .++| |++.|+
T Consensus 238 ~e~~~~v~is~~~~l~~~l~~E~~~l~~~v~kI~~~-g~~vIi~~~~I~~~al~~L~~~------~I~a-----v~~~~k 305 (515)
T 3iyg_G 238 GESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQL-KPDVVITEKGISDLAQHYLMRA------NITA-----IRRVRK 305 (515)
T ss_pred cccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhC-CCCEEEECCccCHHHHHHHHHC------Ccee-----eccCCH
Confidence 8899999999998 66654 78999987 6999999999853 3344 477899
Q ss_pred hhhhhhHhhhCCeEeccCCCCCcccccCcccccc-eeEEEEec---CceEEEcCCCCHHHHHHHHHHHHHHHHhcCChHH
Q psy14622 531 ATLQDLAVATGGIVFGDEASPVKLEDLQATDLGS-VGEIVITK---DDTLILKGKGKKEDIDRRADQIRDQIEATTSDYE 606 (788)
Q Consensus 531 ~~LeDiAilTGg~vis~~~~g~~l~~v~~~~LG~-a~~V~vt~---d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~~~ 606 (788)
..|+|||.+|||+++++ ++++++++||+ |+.|.+.+ ++++++.|.+++
T Consensus 306 ~~leria~~tGa~ii~~------l~~l~~~~LG~~a~~v~~~~~g~~~~~~i~g~~~~---------------------- 357 (515)
T 3iyg_G 306 TDNNRIARACGARIVSR------PEELREEDVGTGAGLLEIKKIGDEYFTFITECKDP---------------------- 357 (515)
T ss_pred HHHHHHHHHhCCeeecc------ccccChhhcCCcccEEEEEEECCceEEEEeCCCCC----------------------
Confidence 99999999999999984 57888999999 99998665 479999987765
Q ss_pred HHHHHHHHHhhcCCeEEEEecCCchhhHHHHHHHHHHHHHHHHHHH-HhccccCCchhHhhHHHHhhhhh-ccCccccCC
Q psy14622 607 REKLQERLARLASGVAVLKVGGSSEVEVNEKKDRVTDALNATRAAV-EEGIVPGGGTALLRCIAVLDKLE-TANADQATG 684 (788)
Q Consensus 607 ~~~L~eRla~LsggvAvI~VGG~Te~EikErk~r~edAl~a~raA~-e~GiVpGGG~all~as~~L~~~~-~~~~~~~~G 684 (788)
..++|.++|+|+.+++|++++++||||++|+|+ ++|+|||||+++++++..|+... +.+.+++.|
T Consensus 358 -------------~~~TIllrG~t~~~l~E~er~i~Dal~~~r~~~~~~~ivpGGGa~e~~~~~~L~~~~~~~~g~eq~~ 424 (515)
T 3iyg_G 358 -------------KACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHALTEKSKAMTGVEQWP 424 (515)
T ss_pred -------------CeEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHhhCCcEEeCCCHHHHHHHHHHHHHhhccCcHHHHH
Confidence 258999999999999999999999999999998 56899999999999999997653 223333333
Q ss_pred ChhhHHHHHHHHHHHHHhhcChhHHHHHHHHHHHhccCeEEEEecccHHHHHHHHhcchHHHHHHHhCCchHHHHHHHhc
Q psy14622 685 KKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVNKVLE 764 (788)
Q Consensus 685 ~~~~i~~r~~~l~~~~~~~~~~~d~~~l~eRla~Lsggvavi~vGa~~~e~~e~~~r~~~a~~a~~Aa~e~g~Vv~~~~~ 764 (788)
++...++++.+.+++|.|||++.-.|+.++++
T Consensus 425 ------------------------------------------------i~~~a~Ale~ip~~La~NaG~d~~~~v~~l~~ 456 (515)
T 3iyg_G 425 ------------------------------------------------YRAVAQALEVIPRTLIQNCGASTIRLLTSLRA 456 (515)
T ss_pred ------------------------------------------------HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Confidence 89999999999999999999999999999975
Q ss_pred C-----CCCeeEEcCCCcccchhhcCC
Q psy14622 765 S-----SGEMGYDAMNNEYVNMIQKVL 786 (788)
Q Consensus 765 ~-----~~~~Gyda~~~~~~dm~~~Gi 786 (788)
. ...||||+.+|+|+||+++||
T Consensus 457 ~h~~~~~~~~G~d~~~g~~~d~~~~gi 483 (515)
T 3iyg_G 457 KHTQENCETWGVNGETGTLVDMKELGI 483 (515)
T ss_pred HHHhcCCCceeeeCCCCcccccHHcCC
Confidence 2 236899999999999999997
No 26
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=100.00 E-value=1.8e-68 Score=613.88 Aligned_cols=420 Identities=19% Similarity=0.256 Sum_probs=359.7
Q ss_pred EeeccCCCCCcCCCCceeeeecCCCCceEeeChHHhhccccccccccChhhHHHHHHhhhcccccCCCchhHHHHHHHHH
Q psy14622 6 LEQSWGSPKITKDDGRNVILEQSWGSPKITKDGVTVAKGIELKDKFQNIGAKLVQDVANNTNEEAGDGTTTATVLARAIA 85 (788)
Q Consensus 6 i~~~~~S~kiLGPkG~nkmI~~~~G~~~ITnDGvTIlk~I~l~d~~ehpgAkLl~e~A~~qd~evGDGTTTavVLA~aLL 85 (788)
+++.++|+ |||+||||||++++|+|+|||||+||+++|+++ ||+|||++++|++||+++||||||+||||++|+
T Consensus 38 la~~vktt--LGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~----hP~Akll~e~a~~qd~e~GDGTTtvvvLa~~Ll 111 (568)
T 3p9d_H 38 LHQMCLTS--MGPCGRNKIIVNHLGKIIITNDAATMLRELDIV----HPAVKVLVMATEQQKIDMGDGTNLVMILAGELL 111 (568)
T ss_dssp HHHHHHTT--SSSSSCEEEEECTTSCEEEESCHHHHTTTCCCC----CHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHH
T ss_pred HHHHHHhc--cCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccC----CHHHHHHHHHHHhhhceeCCCceehHHHHHHHH
Confidence 35668899 999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHhcCCCC----CCHHHHHHHHHhccCC-----chHHhhHHHHHHHHhhh
Q psy14622 86 KEGFEKISKGANPIEIRRGVMLAVETIKTHLKELSKPV----TTPEEIAQVATISANG-----DKAVGELISDAMKRVSA 156 (788)
Q Consensus 86 ~eglklI~~Gi~P~~I~~Gi~~A~~~ile~L~~ls~~V----~d~eeL~~VA~tSan~-----d~~Ig~LIadAv~kV~~ 156 (788)
++|++++++|+||+.|++||++|++.+++.|++++.++ .++++|.+||++|+++ +++||+++++||.++++
T Consensus 112 ~~a~~ll~~GihP~~I~~G~~~A~~~a~e~L~~~a~~v~~~~~~~~~l~~va~tsl~sK~~~~~~~i~~livdAv~~V~~ 191 (568)
T 3p9d_H 112 NVSEKLISMGLSAVEIIQGYNMARKFTLKELDEMVVGEITDKNDKNELLKMIKPVISSKKYGSEDILSELVSEAVSHVLP 191 (568)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCCSCCCCCCTTHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCHHHHHHHHHHHhhccCcchHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999886 5789999999999865 47899999999998411
Q ss_pred ccccccceeeeccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhcccccccccccccccccCC
Q psy14622 157 KVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRFG 236 (788)
Q Consensus 157 ~~e~~d~~ILite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~~~~ 236 (788)
... + .-+
T Consensus 192 ~~~--------------------------------------------------~-----------------------~~~ 198 (568)
T 3p9d_H 192 VAQ--------------------------------------------------Q-----------------------AGE 198 (568)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccc--------------------------------------------------c-----------------------ccC
Confidence 000 0 000
Q ss_pred CccccccccceeecccccccCcccccccccccccccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeeccccC
Q psy14622 237 PEVRGLMLQGVDILADAMYRLPRVLRSQNLTPLLRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVD 316 (788)
Q Consensus 237 ~~~r~~~L~~~~i~~~~~~~tp~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 316 (788)
. ..++
T Consensus 199 ~-------~~~d-------------------------------------------------------------------- 203 (568)
T 3p9d_H 199 I-------PYFN-------------------------------------------------------------------- 203 (568)
T ss_dssp ---------CCC--------------------------------------------------------------------
T ss_pred C-------cccc--------------------------------------------------------------------
Confidence 0 0000
Q ss_pred CcceeeEeeecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccccCCCCCchhhhhhh
Q psy14622 317 GEALSTLVVGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYISPYFIIELK 396 (788)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (788)
T Consensus 204 -------------------------------------------------------------------------------- 203 (568)
T 3p9d_H 204 -------------------------------------------------------------------------------- 203 (568)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhHHHHHHHHHHhhhccCCCCcEEEec--CCccceeEEEEEeeEecccccccccccccCCceeEec---cceeeccccc-
Q psy14622 397 LVLEYYIQTYIYLCLKVGKEGVITVKD--GKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQ---DALVLLSESK- 470 (788)
Q Consensus 397 ~~~~~~~~~~~~~~~kvG~dGvItvee--g~~~~~~lev~eG~~fd~GylSpyfvt~~e~~~v~l~---~p~ILitD~k- 470 (788)
+ ..|+|++ |.++.++ ++++||.|+++|. +|...++ ||+||++|.+
T Consensus 204 ----------------l---~~I~I~k~~Ggs~~dS-~lv~G~v~dk~~~---------~m~~~i~~~~n~kIlll~~~L 254 (568)
T 3p9d_H 204 ----------------V---DSIRVVKIMGGSLSNS-TVIKGMVFNREPE---------GHVKSLSEDKKHKVAVFTCPL 254 (568)
T ss_dssp ----------------G---GGCEEEEEESSCGGGC-EEESSCCBSSCBS---------SGGGSCCCCSSCEEEEECSCS
T ss_pred ----------------c---ceEEEEEccCCCcchh-eeeccEEEeeccc---------CCcEEEecCCcceEEEEccCc
Confidence 1 1355554 7777766 8999999999983 3444666 9999999998
Q ss_pred ------------ccchhhhHH-----------HHHHHHhcCCCeEEEecCCChhhHHhHHhhhcccccceeeecCCCCcc
Q psy14622 471 ------------ISSIQSIIP-----------ALELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGD 527 (788)
Q Consensus 471 ------------I~~i~~IlP-----------~Le~~~~~~rpLLIIAedi~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~ 527 (788)
|++.+++.| .++.+.+.+.||||++++|++.||.+|+.| .++|||.|+
T Consensus 255 e~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~~al~~L~~~------gI~av~~v~--- 325 (568)
T 3p9d_H 255 DIANTETKGTVLLHNAQEMLDFSKGEEKQIDAMMKEIADMGVECIVAGAGVGELALHYLNRY------GILVLKVPS--- 325 (568)
T ss_dssp SSCCCSSSCEEECCSHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECSCCCHHHHHHHHHH------TCEEECCCC---
T ss_pred cccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEECCCcChHHHHHHHHC------CeEEEecCC---
Confidence 677788877 677888899999999999999999999977 479999995
Q ss_pred hhhhhhhhhHhhhCCeEeccCCCCCcccccCcccccceeEEEEec---CceEEEcCCCCHHHHHHHHHHHHHHHHhcCCh
Q psy14622 528 NRKATLQDLAVATGGIVFGDEASPVKLEDLQATDLGSVGEIVITK---DDTLILKGKGKKEDIDRRADQIRDQIEATTSD 604 (788)
Q Consensus 528 ~R~~~LeDiAilTGg~vis~~~~g~~l~~v~~~~LG~a~~V~vt~---d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~ 604 (788)
+..|+|||.+|||+++++ +++++.++||+|++|.+.+ ++++++.|.+
T Consensus 326 --~~~leria~~tGa~ivs~------l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~---------------------- 375 (568)
T 3p9d_H 326 --KFELRRLCRVCGATPLPR------LGAPTPEELGLVETVKTMEIGGDRVTVFKQEQ---------------------- 375 (568)
T ss_dssp --HHHHHHHHHHHSCCCCSS------SSCCCGGGCEECSCCCCCEETTEECBCCCCCS----------------------
T ss_pred --HHHHHHHHHHhCCEEEec------cccCCHHHCCcceEEEEEEecCceEEEEecCC----------------------
Confidence 556999999999999984 5778899999999997665 8899998864
Q ss_pred HHHHHHHHHHHhhcCCeEEEEecCCchhhHHHHHHHHHHHHHHHHHHHH---hccccCCchhHhhHHHHhhhhhc-cCcc
Q psy14622 605 YEREKLQERLARLASGVAVLKVGGSSEVEVNEKKDRVTDALNATRAAVE---EGIVPGGGTALLRCIAVLDKLET-ANAD 680 (788)
Q Consensus 605 ~~~~~L~eRla~LsggvAvI~VGG~Te~EikErk~r~edAl~a~raA~e---~GiVpGGG~all~as~~L~~~~~-~~~~ 680 (788)
.|++++++|.+||+|+.+++|++++++||||++|+|++ +|+|||||+++++++.+|.++.. .+.+
T Consensus 376 -----------~l~~~~~TIllrG~t~~~l~E~er~i~DAL~vvr~av~~~d~~iVpGGGa~E~~ls~~L~~~a~~~~g~ 444 (568)
T 3p9d_H 376 -----------GEISRTSTIILRGATQNNLDDIERAIDDGVAAVKGLMKPSGGKLLPGAGATEIELISRITKYGERTPGL 444 (568)
T ss_dssp -----------SSCCSSCEEEEEESCHHHHHHHHHHHHHHHHHHHHTTSTTCCCCCCTTTHHHHHHHHHHHHHHHTCCST
T ss_pred -----------CCCCCeEEEEECCCcHHHHHHHHHHHHHHHHHHHHHhcccCCeEEeCCcHHHHHHHHHHHHHhccCCcH
Confidence 17899999999999999999999999999999999999 79999999999999999987532 2223
Q ss_pred ccCCChhhHHHHHHHHHHHHHhhcChhHHHHHHHHHHHhccCeEEEEecccHHHHHHHHhcchHHHHHHHhCCchHHHHH
Q psy14622 681 QATGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSSVEIVKKALRQPCMTIATNAGVDASVVVN 760 (788)
Q Consensus 681 ~~~G~~~~i~~r~~~l~~~~~~~~~~~d~~~l~eRla~Lsggvavi~vGa~~~e~~e~~~r~~~a~~a~~Aa~e~g~Vv~ 760 (788)
++.| ++...++++++.+++|.|||++...|+.
T Consensus 445 eq~~------------------------------------------------i~~fa~ALe~ip~~La~NaG~d~~~~v~ 476 (568)
T 3p9d_H 445 LQLA------------------------------------------------IKQFAVAFEVVPRTLAETAGLDVNEVLP 476 (568)
T ss_dssp HHHH------------------------------------------------HHHHHHGGGHHHHHHHHHHTCCHHHHHH
T ss_pred HHHH------------------------------------------------HHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence 3333 8999999999999999999999999999
Q ss_pred HHhcC------------CCCeeEEcCCCc---ccchhhcCC
Q psy14622 761 KVLES------------SGEMGYDAMNNE---YVNMIQKVL 786 (788)
Q Consensus 761 ~~~~~------------~~~~Gyda~~~~---~~dm~~~Gi 786 (788)
++++. ...+|||+.+|+ |+||+++||
T Consensus 477 ~l~~~h~~~~~~~~~~~~~~~G~d~~~g~~~~~~d~~~~gI 517 (568)
T 3p9d_H 477 NLYAAHNVTEPGAVKTDHLYKGVDIDGESDEGVKDIREENI 517 (568)
T ss_dssp HHHHCCCCSSCCCCCCTTSSSCCCHHHHTCCCCHHHHHHHH
T ss_pred HHHHHhhhhcccccccCCCceeEcccCCCcccccChHHccC
Confidence 99863 135899999998 999999986
No 27
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis}
Probab=100.00 E-value=5.1e-69 Score=534.77 Aligned_cols=194 Identities=48% Similarity=0.782 Sum_probs=191.6
Q ss_pred eEEEEEeeEecccccccccccccCCceeEeccceeecccccccchhhhHHHHHHHHhcCCCeEEEecCCChhhHHhHHhh
Q psy14622 430 ELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVVN 509 (788)
Q Consensus 430 ~lev~eG~~fd~GylSpyfvt~~e~~~v~l~~p~ILitD~kI~~i~~IlP~Le~~~~~~rpLLIIAedi~~eAL~~Lv~N 509 (788)
+++++|||+|||||+||||+||+++|+++|+|||||+||+||+++++|+|+||.+.+++||||||||||++|||+|||+|
T Consensus 1 elevvEGmqfDrGYiSpyfvtd~~~m~~~le~p~ILitdkKIs~i~~ilP~LE~~~~~~kpLlIIAedvegeaLatLvvN 80 (194)
T 3m6c_A 1 ELEFTEGIGFDKGFLSAYFVTDFDNQQAVLEDALILLHQDKISSLPDLLPLLEKVAGTGKPLLIVAEDVEGEALATLVVN 80 (194)
T ss_dssp CCCCCSSEEESCCBSCGGGCSBTTTTBEEEEEEEEEEBSSEECCHHHHHHHHHHHHHHTCCEEEEESEECHHHHHHHHHH
T ss_pred CeEEEeeeEccCcccCceeeeccCCcEEEEecceEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEecccccchhhhhhhh
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccccceeeecCCCCcchhhhhhhhhHhhhCCeEeccCCCCCcccccCcccccceeEEEEecCceEEEcCCCCHHHHHH
Q psy14622 510 RLKIGLQVAAVKAPGFGDNRKATLQDLAVATGGIVFGDEASPVKLEDLQATDLGSVGEIVITKDDTLILKGKGKKEDIDR 589 (788)
Q Consensus 510 ~~rg~~~v~AVkaP~fG~~R~~~LeDiAilTGg~vis~~~~g~~l~~v~~~~LG~a~~V~vt~d~Ttii~g~g~~~~I~~ 589 (788)
|+||+++|||||||||||||+++|+|||++|||+||+++ .|.+|+++++++||+|++|+||+|+|+|++|.|++++|++
T Consensus 81 klrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee-~g~~Le~~~~~~LG~a~~v~vtkd~T~iv~G~g~~~~I~~ 159 (194)
T 3m6c_A 81 AIRKTLKAVAVKGPYFGDRRKAFLEDLAVVTGGQVVNPD-AGMVLREVGLEVLGSARRVVVSKDDTVIVDGGGTAEAVAN 159 (194)
T ss_dssp HHHTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGG-GTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHH
T ss_pred hccceEEEEEEECCCCchhhhhhhHhHHHhcCCeEEecc-CCcccccCCHHHCCCccEEEEcCCceEEecCCCCHHHHHH
Confidence 999999999999999999999999999999999999999 8999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHHhhcCCeEEE
Q psy14622 590 RADQIRDQIEATTSDYEREKLQERLARLASGVAVL 624 (788)
Q Consensus 590 R~~~l~~~~~~~~s~~~~~~L~eRla~LsggvAvI 624 (788)
|++|||.|++.++|+|||++|+||||||+||||+|
T Consensus 160 Rv~qIr~~ie~t~s~ydkEKLqERlAkLsGGVAVI 194 (194)
T 3m6c_A 160 RAKHLRAEIDKSDSDWDREKLGERLAKLAGGVAVI 194 (194)
T ss_dssp HHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHBCCC
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHcCCcEEC
Confidence 99999999999999999999999999999999986
No 28
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A
Probab=100.00 E-value=6.3e-67 Score=520.93 Aligned_cols=190 Identities=53% Similarity=0.827 Sum_probs=187.1
Q ss_pred EEEeeEecccccccccccccCCceeEeccceeecccccccchhhhHHHHHHHHhcCCCeEEEecCCChhhHHhHHhhhcc
Q psy14622 433 VIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVVNRLK 512 (788)
Q Consensus 433 v~eG~~fd~GylSpyfvt~~e~~~v~l~~p~ILitD~kI~~i~~IlP~Le~~~~~~rpLLIIAedi~~eAL~~Lv~N~~r 512 (788)
=.+||+|||||+||||+||+++|+++|+|||||+||+||+++++|+|+||.+.+.+||||||||||++|||+|||+|++|
T Consensus 11 ~~~~~qfDrGYiSPYfvtd~e~m~~~le~p~ILitdkKIs~i~~ilP~LE~v~~~~rpLlIIAEDvegEALatLvvNklr 90 (201)
T 3osx_A 11 GSEGMQFDRGYLSPYFINKPESGSVELENPYILLVDKKISNIRELLPVLEGVAKASKPLVIIAEDVEGEALATLVVNNMR 90 (201)
T ss_dssp -CCCEEESCCBSCGGGCSBTTTTBEEEESCEEEEEEEEECCHHHHHHHHHHHHTSSCCEEEEEEEECHHHHHHHHHHHHH
T ss_pred CccccEecCccCChheeecccCCEEEecCCeEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEeccccchhhhHHHHhhcc
Confidence 35899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccceeeecCCCCcchhhhhhhhhHhhhCCeEeccCCCCCcccccCcccccceeEEEEecCceEEEcCCCCHHHHHHHHH
Q psy14622 513 IGLQVAAVKAPGFGDNRKATLQDLAVATGGIVFGDEASPVKLEDLQATDLGSVGEIVITKDDTLILKGKGKKEDIDRRAD 592 (788)
Q Consensus 513 g~~~v~AVkaP~fG~~R~~~LeDiAilTGg~vis~~~~g~~l~~v~~~~LG~a~~V~vt~d~Ttii~g~g~~~~I~~R~~ 592 (788)
|+++|||||||||||+|+++|+|||++|||+||+++ .|.+|+++++++||+|++|+||+|+|+|++|.|++++|++|++
T Consensus 91 g~l~v~AVKAPgFGdrRk~~L~DIAilTGg~visee-~g~~Le~~~~~~LG~a~~V~vtkd~TtIv~G~G~~~~I~~Rv~ 169 (201)
T 3osx_A 91 GIVKVASVKAPGFGDRRKAMLQDIATLTNGTVISEE-IGLELEKATLEDLGQAKRVVINKDTTTIIDGVGEEGAIAARVT 169 (201)
T ss_dssp TSCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGG-GTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHHH
T ss_pred ceEEEEEEeCCCCccchhhhhHhHHHHhCCEEEecc-cCCccccCCHhhCCCccEEEEcCCceEEecCCCCHHHHHHHHH
Confidence 999999999999999999999999999999999999 8999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCChHHHHHHHHHHHhhcCCeEE
Q psy14622 593 QIRDQIEATTSDYEREKLQERLARLASGVAV 623 (788)
Q Consensus 593 ~l~~~~~~~~s~~~~~~L~eRla~LsggvAv 623 (788)
|||.|++.++|+|||++|+||||||+||||+
T Consensus 170 qIr~qie~t~S~ydkEKLqERLAKLsGGVAV 200 (201)
T 3osx_A 170 QIRQQIEESTSDYDREKLQERVAKLAGGVKL 200 (201)
T ss_dssp HHHHHHHTCCCHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHcCCCcC
Confidence 9999999999999999999999999999986
No 29
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1
Probab=100.00 E-value=5.4e-54 Score=409.93 Aligned_cols=144 Identities=49% Similarity=0.819 Sum_probs=142.7
Q ss_pred eeEecccccccccccccCCceeEeccceeecccccccchhhhHHHHHHHHhcCCCeEEEecCCChhhHHhHHhhhccccc
Q psy14622 436 GMKFDRGYISPYFINTAKGAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVVNRLKIGL 515 (788)
Q Consensus 436 G~~fd~GylSpyfvt~~e~~~v~l~~p~ILitD~kI~~i~~IlP~Le~~~~~~rpLLIIAedi~~eAL~~Lv~N~~rg~~ 515 (788)
||+|||||+||||+||+++|+++|+|||||+||+||+++++++|+||.+.+++||||||||||++|||++|++||+||++
T Consensus 1 GmqfDrGYlSpYfvtd~e~m~~~le~p~ILitdkKIs~i~~llP~LE~v~~~~~pLlIIAedvegeaLatLvvNklrg~l 80 (145)
T 1srv_A 1 GYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVSNVRELLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTL 80 (145)
T ss_dssp CEEESCCBSCGGGCSBTTTTBEEEEEEEEEEESSEECCHHHHHHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHTTSC
T ss_pred CccccCCccCceeecCccccEEEeeccEEEEecccccCHHHHHHHHHHHHHHCCCEEEEecccchhhhhhhhhhhhcccc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeecCCCCcchhhhhhhhhHhhhCCeEeccCCCCCcccccCcccccceeEEEEecCceEEEcC
Q psy14622 516 QVAAVKAPGFGDNRKATLQDLAVATGGIVFGDEASPVKLEDLQATDLGSVGEIVITKDDTLILKG 580 (788)
Q Consensus 516 ~v~AVkaP~fG~~R~~~LeDiAilTGg~vis~~~~g~~l~~v~~~~LG~a~~V~vt~d~Ttii~g 580 (788)
+|||||||||||||+++|+|||++|||+|||++ .|.+|+++++++||+|++|+||+|+|+|++|
T Consensus 81 ~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee-~g~~Le~~~~~~LG~a~~v~vtkd~TtIv~G 144 (145)
T 1srv_A 81 SVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEE-LGFKLENATLSMLGRAERVRITKDETTIVGG 144 (145)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTCCEECTT-TTCCGGGCCGGGCEEEEEEEECSSCEEEEEE
T ss_pred eEEEEeCCCcchhhHHHHHHHHHHhCCEEEccc-cCCccccCCHhHCCccCEEEEcCCCeEEeCC
Confidence 999999999999999999999999999999999 8999999999999999999999999999987
No 30
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=99.96 E-value=7.5e-31 Score=300.14 Aligned_cols=383 Identities=22% Similarity=0.272 Sum_probs=195.4
Q ss_pred ccccccCCCccccccccceeecccccccC--c---cccccccc-ccc-cccceeecchhhhhhhhhhhhhhhhhhHHHhh
Q psy14622 229 YAKDVRFGPEVRGLMLQGVDILADAMYRL--P---RVLRSQNL-TPL-LRAKVEFQDALVLLSESKISSIQSIIPALELA 301 (788)
Q Consensus 229 ~~k~~~~~~~~r~~~L~~~~i~~~~~~~t--p---~v~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (788)
.+|++.||+++|..++.++..+++++++| | ++++.++| .|. ||||++++|.+.+.. |..|+++.++
T Consensus 1 ~~k~~~~~~~ar~~~~~~~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~h-p~~n~gAkll------ 73 (546)
T 3rtk_A 1 MAKTIAYDEEARRGLERGLNALADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIELED-PYEKIGAELV------ 73 (546)
T ss_dssp ------------------------------------------------------------CCC-HHHHHHHHHH------
T ss_pred CCceeeccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEECcHHHHHHHccCCC-hhhhHHHHHH------
Confidence 37999999999999999999999999999 9 99999999 888 999999999999877 7778888884
Q ss_pred hccCCcceeeccc--cCCcceeeEe---eecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhh
Q psy14622 302 NSKRKPLVILAED--VDGEALSTLV---VGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEV 376 (788)
Q Consensus 302 ~~~~~~~~~~~~~--~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (788)
.+++++-+| ||||||+++| +.++|.+.+++|.+|+.+.+|+++|.+.|++ .|++
T Consensus 74 ----~e~a~~qd~e~GDGTTtvvVLAgeLL~ea~~li~~GihP~~I~~G~~~A~~~a~e-----------------~L~~ 132 (546)
T 3rtk_A 74 ----KEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGANPLGLKRGIEKAVEKVTE-----------------TLLK 132 (546)
T ss_dssp ----HHHHTSCC-------CHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHH-----------------HHHH
T ss_pred ----HHHHHhhhhhhCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH-----------------HHHH
Confidence 444444555 9999999999 9999999999999999999999999999999 9999
Q ss_pred hhhccccCCCCCchhhhhhhhhHHHHHHHHHHhhhccCCCCcEEEecCCccceeEEEEEeeEeccccc-ccccccccCCc
Q psy14622 377 IEGMKFDRGYISPYFIIELKLVLEYYIQTYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYI-SPYFINTAKGA 455 (788)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kvG~dGvItveeg~~~~~~lev~eG~~fd~Gyl-Spyfvt~~e~~ 455 (788)
++.++.+++.+.++|.+|++ +. .+++.+++ .+- .|-. +..+.+.+|- |.. ..+++ ++|
T Consensus 133 ~s~~v~~~e~L~~vA~iS~~-~~-~i~~liad---Av~-----~V~~----dgvI~Ve~~~----~~~~ds~lv---eGm 191 (546)
T 3rtk_A 133 GAKEVETKEQIAATAAISAG-DQ-SIGDLIAE---AMD-----KVGN----EGVITVEESN----TFGLQLELT---EGM 191 (546)
T ss_dssp TCBCCCSHHHHHHHHHHHHT-CH-HHHHHHHH---HHH-----HSCT----TSEEEEECCS----SSSCEEEEE---CEE
T ss_pred hcccCCChHHHHhHeEEeCC-ch-HHHHHHHH---HHH-----Hhcc----CCceEEEecC----CcccceEEe---eeE
Confidence 99999999999999999998 43 45776665 232 1211 1234444432 111 00110 111
Q ss_pred ee--EeccceeecccccccchhhhHHHHHHHHhcCCCeEEEecCCChhhHHhHHhhhcccccceeeecCCCCcchhhhhh
Q psy14622 456 KV--EFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATL 533 (788)
Q Consensus 456 ~v--~l~~p~ILitD~kI~~i~~IlP~Le~~~~~~rpLLIIAedi~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~~~L 533 (788)
.. .|.+|| ++||.+ .+ -..-..|.+++.+- .+..|. + =..+|
T Consensus 192 ~fdkg~~sp~-~vt~~e-----~m------~~~len~kIll~d~---------------------kIs~~~--~-l~~~l 235 (546)
T 3rtk_A 192 RFDKGYISGY-FVTDPE-----RQ------EAVLEDPYILLVSS---------------------KVSTVK--D-LLPLL 235 (546)
T ss_dssp EESCCBSSGG-GCSBTT-----TT------BEEEESCEEEEBSS---------------------EECCST--T-THHHH
T ss_pred EEcCCccCcc-cccCcc-----cC------eeEecccEEEEECC---------------------ccCCHH--H-HHHHH
Confidence 00 112233 222211 10 01223477777542 011110 0 01123
Q ss_pred hhhHhhhCCeEe-ccCCCCCcccccCccccccee-----EEEEecCceEEEcCCCCHHHHHHHHHHHHHHHHhcCChHHH
Q psy14622 534 QDLAVATGGIVF-GDEASPVKLEDLQATDLGSVG-----EIVITKDDTLILKGKGKKEDIDRRADQIRDQIEATTSDYER 607 (788)
Q Consensus 534 eDiAilTGg~vi-s~~~~g~~l~~v~~~~LG~a~-----~V~vt~d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~~~~ 607 (788)
+.|+- +|..++ ..+ .+++..+.+|=..+ .|. -++-.+- ..-|
T Consensus 236 e~I~~-~g~~lvIi~~----~I~~~Al~~L~~n~lrg~~~v~-------aVk~~~~--------------------~~~r 283 (546)
T 3rtk_A 236 EKVIG-AGKPLLIIAE----DVEGEALSTLVVNKIRGTFKSV-------AVKAPGF--------------------GDRR 283 (546)
T ss_dssp HHHHT-TTCCEEEEES----EECHHHHHHHHHHHHHSSCCEE-------EEECSSC--------------------HHHH
T ss_pred HHHHh-cCCCEEEEcC----CCCHHHHHHHHHhCCCCceEEE-------Eeccccc--------------------cccc
Confidence 33332 333321 111 11222122221100 010 0111110 1113
Q ss_pred HHHHHHHHhhcCCeEEEE-----ecCCchhhHHHHHHHHHHHHHHHHHHHHhccccCCchhHhhHHHHhhhhhccCcccc
Q psy14622 608 EKLQERLARLASGVAVLK-----VGGSSEVEVNEKKDRVTDALNATRAAVEEGIVPGGGTALLRCIAVLDKLETANADQA 682 (788)
Q Consensus 608 ~~L~eRla~LsggvAvI~-----VGG~Te~EikErk~r~edAl~a~raA~e~GiVpGGG~all~as~~L~~~~~~~~~~~ 682 (788)
+..-+||++++||.++-. +--.+...+ | =+..+. +.. .....-.+
T Consensus 284 k~~le~ia~~tG~~ii~~~~~~~l~~~~~~~L--------------------G-----~a~~v~----i~~-d~~~~i~g 333 (546)
T 3rtk_A 284 KAMLQDMAILTGGQVISEEVGLTLENADLSLL--------------------G-----KARKVV----VTK-DETTIVEG 333 (546)
T ss_dssp HHHHHHHHHHHTCCCBCSSSSCCSTTCCTTTS--------------------E-----EEEEEE----ECS-SCEEEEEE
T ss_pred hhhHHHHHHHhCCEEeeccccCccccCCHhhC--------------------C-----eeEEEE----EcC-CeEEEEcC
Confidence 445577888888776542 222221110 0 011110 000 00012347
Q ss_pred CCChhhHHHHHHHHHHHHHhhcChhHHHHHHHHHHHhccCeEEEEecccH-HHHHHHHhcchHHHHHHHhCCchHHH
Q psy14622 683 TGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSS-VEIVKKALRQPCMTIATNAGVDASVV 758 (788)
Q Consensus 683 ~G~~~~i~~r~~~l~~~~~~~~~~~d~~~l~eRla~Lsggvavi~vGa~~-~e~~e~~~r~~~a~~a~~Aa~e~g~V 758 (788)
.|++.+|..|++|||+|++.++++||++||+|||++|+||+|+|.+||+| .++.|++.++.||++++|+++++|+|
T Consensus 334 ~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~g~~atI~vrG~te~~l~E~er~l~DAl~a~r~av~~giV 410 (546)
T 3rtk_A 334 AGDTDAIAGRVAQIRQEIENSDSDYDREKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIV 410 (546)
T ss_dssp CSCHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHCEEEEECCCCSSTHHHHHHHHHHHHHHHHHHHHHHCEE
T ss_pred CCCHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 78999999999999999999999999999999999999999999999998 99999999999999999999998744
No 31
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=99.95 E-value=3.6e-31 Score=303.04 Aligned_cols=390 Identities=25% Similarity=0.310 Sum_probs=260.2
Q ss_pred ccccccCCCccccccccceeecccccccC--c---cccccccc-ccc-cccceeecchhhhhhhhhhhhhhhhhhHHHhh
Q psy14622 229 YAKDVRFGPEVRGLMLQGVDILADAMYRL--P---RVLRSQNL-TPL-LRAKVEFQDALVLLSESKISSIQSIIPALELA 301 (788)
Q Consensus 229 ~~k~~~~~~~~r~~~L~~~~i~~~~~~~t--p---~v~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (788)
++|++.||.++|..++.++..+++++.+| | ++++.++| .|. ||||++++|.+.+.. |+.|+++.++
T Consensus 1 ~~k~~~~g~~ar~~~i~~~~~la~~vkttLGPkG~~kmi~~~~G~~~ITnDG~tIlk~i~~~h-p~en~~Akll------ 73 (547)
T 1kp8_A 1 AAKDVKFGNDAGVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELED-KFENMGAQMV------ 73 (547)
T ss_dssp CCEEEEEHHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSS-HHHHHHHHHH------
T ss_pred CCccccccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEEcCHHHHHHHccccC-hhhhHHHHHH------
Confidence 46999999999999999999999999999 9 99999999 888 999999999999877 8889998884
Q ss_pred hccCCcceeeccc--cCCcceeeEe---eecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhh
Q psy14622 302 NSKRKPLVILAED--VDGEALSTLV---VGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEV 376 (788)
Q Consensus 302 ~~~~~~~~~~~~~--~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (788)
.+++.+.+| ||||||+++| +.++|.+.+++|.+|+.+.+|+++|.+.|++ +|++
T Consensus 74 ----~e~a~~qd~e~GDGTTtvvVLA~~Ll~ea~~lv~~GihP~~I~~G~~~A~~~a~~-----------------~L~~ 132 (547)
T 1kp8_A 74 ----KEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTVAVE-----------------ELKA 132 (547)
T ss_dssp ----HHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH-----------------HHHH
T ss_pred ----HHHHHhhccccCCCcchhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH-----------------HHHH
Confidence 566666666 9999999999 9999999999999999999999999999999 9999
Q ss_pred hhhccccCCCCCchhhhhhhhhHHHHHHHHHHhhhccCCCCcEEEecCCccceeEEEEEeeEeccc-ccccccccccCCc
Q psy14622 377 IEGMKFDRGYISPYFIIELKLVLEYYIQTYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRG-YISPYFINTAKGA 455 (788)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kvG~dGvItveeg~~~~~~lev~eG~~fd~G-ylSpyfvt~~e~~ 455 (788)
++.++.+++++.++|++|++++.. +++.+++ .+- .|-. +..+.+.+|=.++.- .+-+-|+-+.
T Consensus 133 ~s~~v~~~e~l~~vA~iS~~~~~~-i~~liad---Av~-----~V~~----dg~I~Ve~G~~~~ds~~lveG~~fdk--- 196 (547)
T 1kp8_A 133 LSVPCSDSKAIAQVGTISANSDET-VGKLIAE---AMD-----KVGK----EGVITVEDGTGLQDELDVVEGMQFDR--- 196 (547)
T ss_dssp HCBCCCSHHHHHHHHHHHTTSCHH-HHHHHHH---HHH-----HHCT----TSEEEEECCSSSSCEEEEESCEEESC---
T ss_pred hCcCCCCHHHHHHHHHHhccchhH-HHHHHHH---HHH-----HhCc----CCcEEEEeCCccccccEEEecEEEec---
Confidence 999999999999999999987655 4666664 232 2211 122444455333322 2211121121
Q ss_pred eeEeccceeecccccccchhhhHHHHHHHHhcCCCeEEEecC-CChhhHHhHHhhhcccccceeeecCCCCcchhhhhhh
Q psy14622 456 KVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAED-VDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATLQ 534 (788)
Q Consensus 456 ~v~l~~p~ILitD~kI~~i~~IlP~Le~~~~~~rpLLIIAed-i~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~~~Le 534 (788)
.|.+||. ++|.+ .. -..-..|.+++.+- ++ .|. +. ..+|+
T Consensus 197 --g~~~p~~-vt~~~-----~m------~~~lenp~Ill~d~~Is----------------------~~~--~l-~~~le 237 (547)
T 1kp8_A 197 --GYLSPYF-INKPE-----TG------AVELESPFILLADKKIS----------------------NIR--EM-LPVLE 237 (547)
T ss_dssp --CBSSTTC-CSBTT-----TT------BEEEESCEEECEESEEC----------------------CGG--GT-HHHHH
T ss_pred --Ccccccc-ccCcc-----cC------ceEecCceEEEEcCcCC----------------------CHH--HH-HHHHH
Confidence 1334442 33321 00 00112366655432 21 100 00 12344
Q ss_pred hhHhhhCCeE-eccCCCCCcccccCcccccceeEEEEecCceEEEcCCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHH
Q psy14622 535 DLAVATGGIV-FGDEASPVKLEDLQATDLGSVGEIVITKDDTLILKGKGKKEDIDRRADQIRDQIEATTSDYEREKLQER 613 (788)
Q Consensus 535 DiAilTGg~v-is~~~~g~~l~~v~~~~LG~a~~V~vt~d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~~~~~~L~eR 613 (788)
.++- +|..+ |..+ ..++..+.+|=..+- . ..-+...++..+- ..-|+..-+|
T Consensus 238 ~i~~-~g~~lvIi~~----~I~~~Al~~L~~n~i-r-g~~~v~aVk~~~~--------------------~~~rk~~le~ 290 (547)
T 1kp8_A 238 AVAK-AGKPLLIIAE----DVEGEALATLVVNTM-R-GIVKVAAVKAPGF--------------------GDRRKAMLQD 290 (547)
T ss_dssp HHHG-GGCCEEEEES----EECHHHHHHHHHHGG-G-TSSCEEEEECSSC--------------------HHHHHHHHHH
T ss_pred HHHh-cCCCEEEECC----CcCHHHHHHHHhccc-c-cceeEEEEecccc--------------------ccccHHHHHH
Confidence 4432 33332 2111 122222222111000 0 0001111222111 1123455678
Q ss_pred HHhhcCCeEEEE-----ecCCchhhHHHHHHHHHHHHHHHHHHHHhccccCCchhHhhHHHHhhhhhccCccccCCChhh
Q psy14622 614 LARLASGVAVLK-----VGGSSEVEVNEKKDRVTDALNATRAAVEEGIVPGGGTALLRCIAVLDKLETANADQATGKKED 688 (788)
Q Consensus 614 la~LsggvAvI~-----VGG~Te~EikErk~r~edAl~a~raA~e~GiVpGGG~all~as~~L~~~~~~~~~~~~G~~~~ 688 (788)
|++++|+.++-+ +...+...+ | =+..+. ..+ .....=.+.+++.+
T Consensus 291 ia~~tG~~ii~~~~g~~l~~~~~~~L--------------------G-----~a~~v~----~~~-~~~~~i~g~~~~~~ 340 (547)
T 1kp8_A 291 IATLTGGTVISEEIGMELEKATLEDL--------------------G-----QAKRVV----INK-DTTTIIDGVGEEAA 340 (547)
T ss_dssp HHHHHTCCCEEGGGTCCSTTCCTTTS--------------------E-----EEEEEE----ECS-SCEEEEEECCCHHH
T ss_pred HHHHhCCeEecccccCCcccCCHHHC--------------------C-----ceeEEE----Ecc-ceEEEEcCCCCHHH
Confidence 999999987664 222221110 0 010100 000 00012357789999
Q ss_pred HHHHHHHHHHHHHhhcChhHHHHHHHHHHHhccCeEEEEecccH-HHHHHHHhcchHHHHHHHhCCchHHH
Q psy14622 689 IDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSS-VEIVKKALRQPCMTIATNAGVDASVV 758 (788)
Q Consensus 689 i~~r~~~l~~~~~~~~~~~d~~~l~eRla~Lsggvavi~vGa~~-~e~~e~~~r~~~a~~a~~Aa~e~g~V 758 (788)
|+.|++||+.|++.++++||+++|+|||++|+|++|+|.+||+| .++.|++.++.|+++++|+|+++|+|
T Consensus 341 i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~~~~~tI~vrG~te~~l~E~kr~i~DAl~~~r~av~~giV 411 (547)
T 1kp8_A 341 IQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVV 411 (547)
T ss_dssp HHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHHHCEEEEECCCSSHHHHHHHHHHHHHHHHHHHHHHHHCEE
T ss_pred HHHHHHHHHHHhhcccchhhHHHHHHHHHHhcCCeEEEEEcCCcHhHHHHHHHHHHHHHHHHHHhccCCEE
Confidence 99999999999999999999999999999999999999999998 99999999999999999999999744
No 32
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=99.95 E-value=2.8e-30 Score=295.73 Aligned_cols=394 Identities=23% Similarity=0.285 Sum_probs=247.6
Q ss_pred ccccccCCCccccccccceeecccccccC--c---cccccccc-ccc-cccceeecchhhhhhhhhhhhhhhhhhHHHhh
Q psy14622 229 YAKDVRFGPEVRGLMLQGVDILADAMYRL--P---RVLRSQNL-TPL-LRAKVEFQDALVLLSESKISSIQSIIPALELA 301 (788)
Q Consensus 229 ~~k~~~~~~~~r~~~L~~~~i~~~~~~~t--p---~v~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (788)
.+|++.||.++|..++.++..+++++.+| | ++++.++| .|. ||||++++|++.+.. |+.|+++.++
T Consensus 2 ~~k~~~~g~~ar~~~i~~~~~la~~vkttLGPkG~~kmi~~~~g~~~iTnDG~tIlk~i~~~h-p~en~~Akll------ 74 (545)
T 1iok_A 2 AAKEVKFNSDARDRMLKGVNILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELSD-KFENMGAQMV------ 74 (545)
T ss_dssp CCEEEEEHHHHHHHHHHHHHHHHHHHGGGCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSS-HHHHHHHHHH------
T ss_pred CchhhhccHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEECCCCCeEEeCCHHHHHHHhccCC-hhhHHHHHHH------
Confidence 47999999999999999999999999999 9 99999999 888 999999999999877 8889998884
Q ss_pred hccCCcceeeccc--cCCcceeeEe---eecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhh
Q psy14622 302 NSKRKPLVILAED--VDGEALSTLV---VGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEV 376 (788)
Q Consensus 302 ~~~~~~~~~~~~~--~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (788)
.+++.+-+| ||||||+++| +.++|.+.+++|.+|+.+.+|+++|.+.|++ .|++
T Consensus 75 ----~e~a~~qd~e~GDGTTtvvVLA~~Ll~ea~~li~~GihP~~I~~G~~~A~~~a~~-----------------~L~~ 133 (545)
T 1iok_A 75 ----REVASRTNDEAGDGTTTATVLAQAIVREGLKAVAAGMNPMDLKRGIDVATAKVVE-----------------AIKS 133 (545)
T ss_dssp ----HHHHHHGGGGCSTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH-----------------HHHT
T ss_pred ----HHHHHhhccccCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH-----------------HHHH
Confidence 455555555 9999999999 9999999999999999999999999999999 9999
Q ss_pred hhhccccCCCCCchhhhhhhhhHHHHHHHHHHhhhccCCCCcEEEe-cCCccceeEEEEEeeEeccc-ccccccccccCC
Q psy14622 377 IEGMKFDRGYISPYFIIELKLVLEYYIQTYIYLCLKVGKEGVITVK-DGKTLTDELEVIEGMKFDRG-YISPYFINTAKG 454 (788)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kvG~dGvItve-eg~~~~~~lev~eG~~fd~G-ylSpyfvt~~e~ 454 (788)
++.++.+++++.+++.+|++++.. +++.+++ .+- .|. +|. +.+.+|=.++.- .+-+-|+-+.
T Consensus 134 ~s~~v~~~e~l~~va~iS~~~~~~-i~~li~d---Av~-----~V~~~g~-----I~Ve~G~~~~ds~~lveG~~~dk-- 197 (545)
T 1iok_A 134 AARPVNDSSEVAQVGTISANGESF-IGQQIAE---AMQ-----RVGNEGV-----ITVEENKGMETEVEVVEGMQFDR-- 197 (545)
T ss_dssp TCBCCCSTTTTTHHHHHTTTTCHH-HHHHHHH---HHH-----HHCTTSC-----CCCEECSSSCCEEEEECCEECSC--
T ss_pred hcccCCCHHHHHHHHHhhcCCchh-HHHHHHH---HHH-----HhccCCe-----EEEEeCCccccceEEEecEEEec--
Confidence 999999999999999999987655 4666665 232 221 221 222245333321 2211122122
Q ss_pred ceeEeccceeecccccccchhhhHHHHHHHHhcCCCeEEEec-CCChhhHHhHHhhhcccccceeeecCCCCcchhhhhh
Q psy14622 455 AKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAE-DVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATL 533 (788)
Q Consensus 455 ~~v~l~~p~ILitD~kI~~i~~IlP~Le~~~~~~rpLLIIAe-di~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~~~L 533 (788)
.|.+||. ++|.+ .. | ..-..|.+++.+ .++ ..+-. ..+|
T Consensus 198 ---g~~~p~~-vt~~~-----~m-~-----~~~en~~Ill~d~~I~----------~~~~l---------------~~~l 237 (545)
T 1iok_A 198 ---GYLSPYF-VTNAD-----KM-I-----AELEDAYILLHEKKLS----------SLQPM---------------VPLL 237 (545)
T ss_dssp ---CCSCGGG-CCCSS-----SS-C-----EEEEEEEEEECSSCBC----------CCCC--------------------
T ss_pred ---Ccccccc-ccCcc-----cC-c-----eeecCCeEEEEcCCcC----------CHHHH---------------HHHH
Confidence 1334442 33321 00 0 111236666543 221 00000 1224
Q ss_pred hhhHhhhCCeE-eccCCCCCcccccCcccccceeEEEEecCceEEEcCCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHH
Q psy14622 534 QDLAVATGGIV-FGDEASPVKLEDLQATDLGSVGEIVITKDDTLILKGKGKKEDIDRRADQIRDQIEATTSDYEREKLQE 612 (788)
Q Consensus 534 eDiAilTGg~v-is~~~~g~~l~~v~~~~LG~a~~V~vt~d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~~~~~~L~e 612 (788)
+.++ -+|..+ |..+ ..++..+.+|=..+ +.-+ -+...++..+-. .-|...-+
T Consensus 238 e~i~-~~g~~lvIi~~----~I~~~Al~~L~~n~-irg~-~~v~aVk~~~~~--------------------~~~~~~le 290 (545)
T 1iok_A 238 ESVI-QSQKPLLIVAE----DVEGEALATLVVNK-LRGG-LKIAAVKAPGFG--------------------DRRKAMLQ 290 (545)
T ss_dssp -------CCCCEEEES----CBC-------------------CEEEECSCCT--------------------THHHHHHH
T ss_pred HHHH-hcCCCEEEECC----CcCHHHHHHHHHcc-cccc-ceeEEEecchhh--------------------hccHHHHH
Confidence 4432 233332 2211 12222222221110 0000 012222211110 12345567
Q ss_pred HHHhhcCCeEEEEecCCchhhHHHHHHHHHHHHHHHHHHHHhccccCCchhHhhHHHHhhhhhccCccccCCChhhHHHH
Q psy14622 613 RLARLASGVAVLKVGGSSEVEVNEKKDRVTDALNATRAAVEEGIVPGGGTALLRCIAVLDKLETANADQATGKKEDIDRR 692 (788)
Q Consensus 613 Rla~LsggvAvI~VGG~Te~EikErk~r~edAl~a~raA~e~GiVpGGG~all~as~~L~~~~~~~~~~~~G~~~~i~~r 692 (788)
||++++|+.++-.-=|.+ +++. ..-. -| =+..+.. .+ ..-..-.+.+++.+|++|
T Consensus 291 ~ia~~tGa~ii~~~~~~~----------l~~~--------~~~~-LG-~a~~v~~----~~-~~~~~i~g~~~~~~i~~r 345 (545)
T 1iok_A 291 DIAILTGGQVISEDLGMK----------LENV--------TIDM-LG-RAKKVSI----NK-DNTTIVDGAGEKAEIEAR 345 (545)
T ss_dssp HHHHHHTC---------------------------------CTT-SE-EEEEEEE----CS-SCEEEESCCCCHHHHHHH
T ss_pred HHHHhcCCeeecccccCC----------cccC--------CHHH-cC-cCcEEEE----ec-CEEEEEeCCCCHHHHHHH
Confidence 899999987765411110 0100 0000 00 0111100 00 000123467899999999
Q ss_pred HHHHHHHHHhhcChhHHHHHHHHHHHhccCeEEEEecccH-HHHHHHHhcchHHHHHHHhCCchHHH
Q psy14622 693 ADQIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSS-VEIVKKALRQPCMTIATNAGVDASVV 758 (788)
Q Consensus 693 ~~~l~~~~~~~~~~~d~~~l~eRla~Lsggvavi~vGa~~-~e~~e~~~r~~~a~~a~~Aa~e~g~V 758 (788)
++||+.|++.++++||+++|+|||++|+|++|+|.+||+| .++.|++.++.|+++++|+++++|+|
T Consensus 346 ~~~i~~~~~~~~s~~~~ekl~erlakl~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~av~~giV 412 (545)
T 1iok_A 346 VSQIRQQIEETTSDYDREKLQERVAKLAGGVAVIRVGGMTEIEVKERKDRVDDALNATRAAVQEGIV 412 (545)
T ss_dssp HHHHHHHHTTCCCSSHHHHHHHHHHTTSSCEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHHHCEE
T ss_pred HHHHHHHHhccCchhhHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 9999999999999999999999999999999999999998 99999999999999999999999743
No 33
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=99.94 E-value=1e-29 Score=291.03 Aligned_cols=393 Identities=23% Similarity=0.292 Sum_probs=256.4
Q ss_pred cccccCCCccccccccceeecccccccC--c---cccccccc-ccc-cccceeecchhhhhhhhhhhhhhhhhhHHHhhh
Q psy14622 230 AKDVRFGPEVRGLMLQGVDILADAMYRL--P---RVLRSQNL-TPL-LRAKVEFQDALVLLSESKISSIQSIIPALELAN 302 (788)
Q Consensus 230 ~k~~~~~~~~r~~~L~~~~i~~~~~~~t--p---~v~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (788)
+|++.||.++|..++.++..+++++.+| | ++++.++| .|. ||||++++|++.+.. |+.|+++.++
T Consensus 2 ~k~~~~g~~ar~~~~~~~~~la~~vkttLGPkG~~kmi~~~~g~~~ITnDG~tIlk~i~~~h-p~en~~Akll------- 73 (543)
T 1we3_A 2 AKILVFDEAARRALERGVNAVANAVKVTLGPRGRNVVLEKKFGSPTITKDGVTVAKEVELED-HLENIGAQLL------- 73 (543)
T ss_dssp CEEEEEHHHHHHHHHHHHHHHHHHHGGGCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSS-HHHHHHHHHH-------
T ss_pred CccccccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEEcCHHHHHHHcccCC-hHHhHHHHHH-------
Confidence 6999999999999999999999999999 9 99999999 888 999999999999877 8889998884
Q ss_pred ccCCcceeeccc--cCCcceeeEe---eecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhh
Q psy14622 303 SKRKPLVILAED--VDGEALSTLV---VGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVI 377 (788)
Q Consensus 303 ~~~~~~~~~~~~--~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (788)
.+++.+-+| ||||||+++| +.++|.+.+++|.+|+.+.+|+++|.+.|++ +|+++
T Consensus 74 ---~e~a~~qd~e~GDGTTtvvVLA~~LL~ea~~li~~GihP~~I~~G~~~A~~~a~~-----------------~L~~~ 133 (543)
T 1we3_A 74 ---KEVASKTNDVAGDGTTTATVLAQAIVREGLKNVAAGANPLALKRGIEKAVEAAVE-----------------KIKAL 133 (543)
T ss_dssp ---HHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH-----------------HHHHT
T ss_pred ---HHHHHhhheecCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH-----------------HHHHh
Confidence 555555566 9999999999 9999999999999999999999999999999 99999
Q ss_pred hhccccCCCCCchhhhhhhhhHHHHHHHHHHhhhccCCCCcEEEecCCccceeEEEEEeeEeccc-ccccccccccCCce
Q psy14622 378 EGMKFDRGYISPYFIIELKLVLEYYIQTYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRG-YISPYFINTAKGAK 456 (788)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kvG~dGvItveeg~~~~~~lev~eG~~fd~G-ylSpyfvt~~e~~~ 456 (788)
+.++.+++++.++|++|++ + +.+++.+++ .+-.=| .+| .+.+.+|=.++.- .+-+-|+-+.
T Consensus 134 s~~v~~~~~l~~vA~iS~~-~-~~i~~li~d---Av~~V~----~~g-----~I~Ve~G~~~~ds~~lv~G~~~dk---- 195 (543)
T 1we3_A 134 AIPVEDRKAIEEVATISAN-D-PEVGKLIAD---AMEKVG----KEG-----IITVEESKSLETELKFVEGYQFDK---- 195 (543)
T ss_dssp CBCCCSHHHHHHHHHHHHT-C-HHHHHHHHH---HHHTTC----TTS-----EEEEEECSSSSCEEEEECSEEESC----
T ss_pred cccCCCHHHHHHhhhhhcC-C-HHHHHHHHH---HHHHhC----cCC-----cEEEecCCccccceEEEcCEEEec----
Confidence 9999999999999999998 3 445776554 342211 122 2444455333321 2111111121
Q ss_pred eEeccceeecccccccchhhhHHHHHHHHhcCCCeEEEec-CCChhhHHhHHhhhcccccceeeecCCCCcchhhhhhhh
Q psy14622 457 VEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAE-DVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATLQD 535 (788)
Q Consensus 457 v~l~~p~ILitD~kI~~i~~IlP~Le~~~~~~rpLLIIAe-di~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~~~LeD 535 (788)
.|.+||. ++|.+ .. | ..-..|.+++.+ .++.. .-| ..+|+.
T Consensus 196 -g~~~p~~-vt~~~-----~m-~-----~~~en~~Ill~d~~Is~~--~~l-----------------------~~~le~ 237 (543)
T 1we3_A 196 -GYISPYF-VTNPE-----TM-E-----AVLEDAFILIVEKKVSNV--REL-----------------------LPILEQ 237 (543)
T ss_dssp -CBSSGGG-CSBTT-----TT-B-----CCEEEEEEEEESSCBCCH--HHH-----------------------HHHHHH
T ss_pred -Ccccccc-ccCcc-----cC-c-----eeecCceEEEECCCcCCH--HHH-----------------------HHHHHH
Confidence 1334542 33321 00 0 011236666643 22210 000 123444
Q ss_pred hHhhhCCeE-eccCCCCCcccccCcccccceeEEEEecCceEEEcCCCCHHHHHHHHHHHHHHHHhcCChHHHHHHHHHH
Q psy14622 536 LAVATGGIV-FGDEASPVKLEDLQATDLGSVGEIVITKDDTLILKGKGKKEDIDRRADQIRDQIEATTSDYEREKLQERL 614 (788)
Q Consensus 536 iAilTGg~v-is~~~~g~~l~~v~~~~LG~a~~V~vt~d~Ttii~g~g~~~~I~~R~~~l~~~~~~~~s~~~~~~L~eRl 614 (788)
++ -+|..+ |..+ ..++..+.+|-..+ +. ..-+...++..+- ..-|+..-+||
T Consensus 238 i~-~~g~~lvii~~----~I~~~Al~~L~~n~-ir-g~~~v~aVk~~~~--------------------~~~~~~~le~i 290 (543)
T 1we3_A 238 VA-QTGKPLLIIAE----DVEGEALATLVVNK-LR-GTLSVAAVKAPGF--------------------GDRRKEMLKDI 290 (543)
T ss_dssp HH-TTTCCEEEEES----CBCHHHHHHHHHHH-HH-TSCCEEEEECSSS--------------------HHHHHHHHHHH
T ss_pred HH-hcCCCEEEEcC----CccHHHHHHHHHhc-cc-cceeEEEEeccch--------------------hhhhHHHHHHH
Confidence 32 233332 2111 11222222211100 00 0001111221111 12234556788
Q ss_pred HhhcCCeEEEEecCCchhhHHHHHHHHHHHHHHHHHHHHhccccCCchhHhhHHHHhhhhhccCccccCCChhhHHHHHH
Q psy14622 615 ARLASGVAVLKVGGSSEVEVNEKKDRVTDALNATRAAVEEGIVPGGGTALLRCIAVLDKLETANADQATGKKEDIDRRAD 694 (788)
Q Consensus 615 a~LsggvAvI~VGG~Te~EikErk~r~edAl~a~raA~e~GiVpGGG~all~as~~L~~~~~~~~~~~~G~~~~i~~r~~ 694 (788)
++++|+.++-+.-|.+-.++..- .-| =+..+. ..+ .....-.+.+++.+|+.|++
T Consensus 291 a~~tGa~ii~~~~g~~l~~~~~~-------------------~LG-~a~~v~----~~~-~~~~~i~g~~~~~~i~~r~~ 345 (543)
T 1we3_A 291 AAVTGGTVISEELGFKLENATLS-------------------MLG-RAERVR----ITK-DETTIVGGKGKKEDIEARIN 345 (543)
T ss_dssp HHHHCCCCBCTTTTCCGGGCCGG-------------------GCE-EEEEEE----ECS-SCEEEEEECCCHHHHHHHHH
T ss_pred HHHhCCceeeccccCCcccCCHH-------------------HCC-CceEEE----EEc-CEEEEEcCCCCHHHHHHHHH
Confidence 89998876543222111111000 000 010000 000 00012346789999999999
Q ss_pred HHHHHHHhhcChhHHHHHHHHHHHhccCeEEEEecccH-HHHHHHHhcchHHHHHHHhCCchHHH
Q psy14622 695 QIRDQIEATTSDYEREKLQERLARLASGVAVLKVGGSS-VEIVKKALRQPCMTIATNAGVDASVV 758 (788)
Q Consensus 695 ~l~~~~~~~~~~~d~~~l~eRla~Lsggvavi~vGa~~-~e~~e~~~r~~~a~~a~~Aa~e~g~V 758 (788)
||+.|++.++++||+++|+|||++|+|++++|.+||+| .++.|++.++.||++++|+++++|+|
T Consensus 346 ~i~~~~~~~~s~~~~e~l~erlakl~~~~~tI~lrG~te~~l~E~~r~i~DAl~~~r~av~~giV 410 (543)
T 1we3_A 346 GIKKELETTDSEYAREKLQERLAKLAGGVAVIRVGAATETELKEKKHRFEDALNATRAAVEEGIV 410 (543)
T ss_dssp HHHHHHTTCCSHHHHHHHHHHHHHHTTCEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHHHCEE
T ss_pred HHHHHhhccCchhHHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHhccCcC
Confidence 99999999999999999999999999999999999998 99999999999999999999998743
No 34
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=99.79 E-value=3.2e-22 Score=230.94 Aligned_cols=389 Identities=10% Similarity=0.059 Sum_probs=216.5
Q ss_pred cccCCCccccccccceeecccccccC--c---cccccccc-ccc-cccceeecchhhhhhhhhhhhhhhhhhHHHhhhcc
Q psy14622 232 DVRFGPEVRGLMLQGVDILADAMYRL--P---RVLRSQNL-TPL-LRAKVEFQDALVLLSESKISSIQSIIPALELANSK 304 (788)
Q Consensus 232 ~~~~~~~~r~~~L~~~~i~~~~~~~t--p---~v~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (788)
+-.+|.++|..++.++..+++++.+| | ++++.++| .|. ||||++++|.+.+... . +.++
T Consensus 13 ~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~~~hP-~----Akll--------- 78 (590)
T 3p9d_C 13 ERTTGRQAQISNITAAKAVADVIRTCLGPKAMLKMLLDPMGGLVLTNDGHAILREIDVAHP-A----AKSM--------- 78 (590)
T ss_dssp CBCTTHHHHHTTHHHHHHHHHHSTTTCSSSCCCCEEECTTTCCBCCCCHHHHHHHSCCCCH-H----HHTH---------
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEECCHHHHHHHhhCCCH-H----HHHH---------
Confidence 55678889999999999999999999 9 99999999 888 9999999999988773 2 3442
Q ss_pred CCcceeeccc--cCCcceeeEe---eeccccee-ecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhh
Q psy14622 305 RKPLVILAED--VDGEALSTLV---VGKEGVIT-VKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIE 378 (788)
Q Consensus 305 ~~~~~~~~~~--~d~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (788)
.+++.+-+| ||||||+++| +-++|.+- +++|.+|+.+.+|+++|.+.|++ .|++++
T Consensus 79 -~e~a~~qd~e~GDGTTtvvVLA~eLL~~a~~l~l~~GihP~~I~~G~~~A~~~a~~-----------------~L~~~s 140 (590)
T 3p9d_C 79 -LELSRTQDEEVGDGTTTVIILAGEILAQCAPYLIEKNIHPVIIIQALKKALTDALE-----------------VIKQVS 140 (590)
T ss_dssp -HHHTTTHHHHCSSCHHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHH-----------------HHHHHC
T ss_pred -HHHHHhhhhhhCCCccchHHHHHHHHhhhHHhhhhcCCCHHHHHHHHHHHHHHHHH-----------------HHHHHh
Confidence 334444444 9999999999 89999999 99999999999999999999999 899999
Q ss_pred hcccc--CCCCCchhhhh--hh---hhHHHHHHHHHHhhhccCCCCcEEEecCCcccee----EEEE--EeeEecccccc
Q psy14622 379 GMKFD--RGYISPYFIIE--LK---LVLEYYIQTYIYLCLKVGKEGVITVKDGKTLTDE----LEVI--EGMKFDRGYIS 445 (788)
Q Consensus 379 ~~~~~--~~~~~~~~~~~--~~---~~~~~~~~~~~~~~~kvG~dGvItveeg~~~~~~----lev~--eG~~fd~GylS 445 (788)
.++.. ++.+.++|.++ ++ ...+.+++.+++++++||++|+++++++++++.. +.+. .|=.++.-.
T Consensus 141 ~~v~~~~~e~L~~vA~tslsSK~~~~~~~~i~~livdAv~~V~~~~~~~~~~~~~~~vDl~~~I~I~ki~Ggs~~ds~-- 218 (590)
T 3p9d_C 141 KPVDVENDAAMKKLIQASIGTKYVIHWSEKMCELALDAVKTVRKDLGQTVEGEPNFEIDIKRYVRVEKIPGGDVLDSR-- 218 (590)
T ss_dssp CTTTTCCTHHHHHHHTTTSTTSTTGGGHHHHHHHHHHHHTTSTTCC-----------CCCSSSSCEEEESSCCGGGCB--
T ss_pred hccccCCHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHhcccccCccccccccccchhhceEEEEecCCCcccce--
Confidence 99875 67899999765 32 3567789999999999999999999887655321 2222 232221111
Q ss_pred cccccccCCceeEeccceeecccccccchhhhHHHHHHHHhcCCCeEEEe-cCCChhhHHhHHhhhcccccceeeecCCC
Q psy14622 446 PYFINTAKGAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILA-EDVDGEALSTLVVNRLKIGLQVAAVKAPG 524 (788)
Q Consensus 446 pyfvt~~e~~~v~l~~p~ILitD~kI~~i~~IlP~Le~~~~~~rpLLIIA-edi~~eAL~~Lv~N~~rg~~~v~AVkaP~ 524 (788)
+-+-++| |+.+.+.+ +| .+-..|.+++. ..++.+-..+ ...+ -++.|.
T Consensus 219 -------------lv~Gmvf--dk~~~~~~--m~-----~~~en~kIll~d~~Le~~K~e~------~~~v---~Is~~~ 267 (590)
T 3p9d_C 219 -------------VLKGVLL--NKDVVHPK--MS-----RHIENPRVVLLDCPLEYKKGES------QTNI---EIEKEE 267 (590)
T ss_dssp -------------CCSSEEE--CCCCSCTT--SC-----SCEESCCEECCCCCCSCCCCTT------TEEC---CBCSTT
T ss_pred -------------eeeEEEE--ecccCCCC--Cc-----ceeeeeEEEEEccccccccccc------CceE---EeCCHH
Confidence 1111111 22222221 11 12234666553 3443221100 0000 011110
Q ss_pred -C-----cchh--hhhhhhhHhhhCCeEeccCCCCCcccccCcccccceeEEEEecCceEEEcCCCCHHHHHHHHHHHHH
Q psy14622 525 -F-----GDNR--KATLQDLAVATGGIVFGDEASPVKLEDLQATDLGSVGEIVITKDDTLILKGKGKKEDIDRRADQIRD 596 (788)
Q Consensus 525 -f-----G~~R--~~~LeDiAilTGg~vis~~~~g~~l~~v~~~~LG~a~~V~vt~d~Ttii~g~g~~~~I~~R~~~l~~ 596 (788)
| .+++ +.+++.|+- +|..++-.+ ...++....+|=.. +.+.++. .
T Consensus 268 ~l~~il~~E~~~l~~~vekI~~-~g~~vII~e---~~I~d~Al~~L~k~--------~I~av~~---~------------ 320 (590)
T 3p9d_C 268 DWNRILQIEEEQVQLMCEQILA-VRPTLVITE---KGVSDLAQHYLLKG--------GCSVLRR---V------------ 320 (590)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT-TCCSEECCS---SCCCTHHHHHHHHT--------TCCCCCC---C------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-cCCcEEEec---CCcCHHHHHHHHhc--------cceeecc---C------------
Confidence 0 0000 122234444 366654322 13445545555332 1111221 1
Q ss_pred HHHhcCChHHHHHHHHHHHhhcCCeEEEEecCCchhhHHHHHHHHHHHHHHHHHHHHhccccCCchhHhhHHHHhhhhhc
Q psy14622 597 QIEATTSDYEREKLQERLARLASGVAVLKVGGSSEVEVNEKKDRVTDALNATRAAVEEGIVPGGGTALLRCIAVLDKLET 676 (788)
Q Consensus 597 ~~~~~~s~~~~~~L~eRla~LsggvAvI~VGG~Te~EikErk~r~edAl~a~raA~e~GiVpGGG~all~as~~L~~~~~ 676 (788)
+...-+|||+++|+.++-++.-.++.. -|-++..++- ..+..
T Consensus 321 ----------~k~~le~ia~~TGa~iis~l~~~~~~~------------------------LG~~a~~v~~----~~ig~ 362 (590)
T 3p9d_C 321 ----------KKSDNNRIARVTGATIVNRVEDLKESD------------------------VGTNCGLFKV----EMIGD 362 (590)
T ss_dssp ----------CHHHHHHHHHHHTCCCCSCSTTCCTTS------------------------CBCCCSEEEC----CEETT
T ss_pred ----------CHHHHHHHHHHhCCceeecccCCCHHH------------------------hCCcCCEEEE----EEEcC
Confidence 123357999999998765433222111 1111111100 00000
Q ss_pred c--CccccCCChhh--------------------------HHHHHHHHHHHHHhhcChhHHHHHHHHHHHhccCeEEEEe
Q psy14622 677 A--NADQATGKKED--------------------------IDRRADQIRDQIEATTSDYEREKLQERLARLASGVAVLKV 728 (788)
Q Consensus 677 ~--~~~~~~G~~~~--------------------------i~~r~~~l~~~~~~~~~~~d~~~l~eRla~Lsggvavi~v 728 (788)
+ ..-++.+++.. |+.|++|||.|++.++++||++ +++|+||+|+|.+
T Consensus 363 d~~~~i~g~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~i~~r~~~i~~~~~~~~~~~~~~-----~~~l~ggv~tI~l 437 (590)
T 3p9d_C 363 EYFSFLDNCKEPGSGSGWSHPQFEKGSGKRRWKKNFIAVSAANRFKKISSSGALGSGHHHHH-----HHHGSGKACTIML 437 (590)
T ss_dssp EECEEECC--------------------------------------------------------------CCCSCCCEEE
T ss_pred cEEEEEeCCCCccccccccccccccccchhhhhcchhhHHHHHHHHHHHHHHhccCCHHHHH-----HHhhcCCeeEEEE
Confidence 0 00122334444 9999999999999999999977 4899999999999
Q ss_pred cccH-HHHHHHHhcchHHHHHHHhCCch
Q psy14622 729 GGSS-VEIVKKALRQPCMTIATNAGVDA 755 (788)
Q Consensus 729 Ga~~-~e~~e~~~r~~~a~~a~~Aa~e~ 755 (788)
||+| .++.|++.++.||++|+|+++++
T Consensus 438 rg~te~~l~E~kr~i~DAl~a~r~av~~ 465 (590)
T 3p9d_C 438 RGGSKDILNEIDRNLQDAMAVARNVMLS 465 (590)
T ss_dssp ECSSTTTHHHHHHHHHHHHHHHHHHHHC
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9998 99999999999999999999987
No 35
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=99.77 E-value=7e-23 Score=233.91 Aligned_cols=349 Identities=14% Similarity=0.113 Sum_probs=225.6
Q ss_pred ccccCCCccccccccceeecccccccC--c---cccccc-cc-ccc-cccceeecchhhhhhhhhhhhhhhhhhHHHhhh
Q psy14622 231 KDVRFGPEVRGLMLQGVDILADAMYRL--P---RVLRSQ-NL-TPL-LRAKVEFQDALVLLSESKISSIQSIIPALELAN 302 (788)
Q Consensus 231 k~~~~~~~~r~~~L~~~~i~~~~~~~t--p---~v~~~~-~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (788)
++..||.++|..++.++..+++++++| | ++++.+ +| .|. ||||++++|.+.+... +|.++
T Consensus 10 ~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~~G~~~iTnDG~tIlk~i~~~hP-----~Akll------- 77 (527)
T 3p9d_B 10 VTEERAENARLSAFVGAIAVGDLVKSTLGPKGMDKLLQSASSNTCMVTNDGATILKSIPLDNP-----AAKVL------- 77 (527)
T ss_dssp EEEEESHHHHHHHHHHHHHHHHHHHSCSSSSCCEEEEECTTTCCEECCCCHHHHHHTCCCCCH-----HHHHH-------
T ss_pred chhhhhHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEecCCCCeEEeCCHHHHHHHhccCCH-----HHHHH-------
Confidence 678899999999999999999999999 9 899988 89 888 9999999999988752 45552
Q ss_pred ccCCcceeeccc--cCCcceeeEe---eecccceeecC-CCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhh
Q psy14622 303 SKRKPLVILAED--VDGEALSTLV---VGKEGVITVKD-GKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEV 376 (788)
Q Consensus 303 ~~~~~~~~~~~~--~d~~~~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (788)
.+++.+-+| ||||||+++| +.++|.+.|++ |.+|+.+.+|+++|.+.|++ +|++
T Consensus 78 ---~e~a~~qd~~~GDGTTtavVLA~~Ll~ea~~lv~~~GihP~~I~~G~~~A~~~a~~-----------------~L~~ 137 (527)
T 3p9d_B 78 ---VNISKVQDDEVGDGTTSVTVLSAELLREAEKLIDQSKIHPQTIIEGYRLASAAALD-----------------ALTK 137 (527)
T ss_dssp ---HHHHHHHHHHTCSCTTTTTHHHHHHHHHHHHHTC---CCHHHHHHHHHHHHHHHHH-----------------HHHH
T ss_pred ---HHHHHHhHhhhCCcHhHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH-----------------HHHH
Confidence 344444555 9999999999 99999999999 99999999999999999999 8999
Q ss_pred hhhcccc-----CCCCCchhhhhhhh-----hHHHHHHHHHHhhhccCCCCcEEEe-cCCccceeEEEEEeeEecccccc
Q psy14622 377 IEGMKFD-----RGYISPYFIIELKL-----VLEYYIQTYIYLCLKVGKEGVITVK-DGKTLTDELEVIEGMKFDRGYIS 445 (788)
Q Consensus 377 ~~~~~~~-----~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~kvG~dGvItve-eg~~~~~~lev~eG~~fd~GylS 445 (788)
++.++.+ ++.+.++|.+|+++ ..+.+++.+++++ - .|. +|. + +.+.+.+ ...|.++
T Consensus 138 ~s~~v~~~~~~~~~~l~~vA~tSl~sK~~~~~~~~i~~li~dAv---~-----~V~~~~~-~-~~I~V~k---~~gg~~~ 204 (527)
T 3p9d_B 138 AAVDNSHDKTMFREDLIHIAKTTLSSKILSQDKDHFAELATNAI---L-----RLKGSTN-L-EHIQIIK---ILGGKLS 204 (527)
T ss_dssp TCBCCCCCHHHHHHHHHHHHHHHHTTSGGGGGHHHHHHHHHHHH---H-----TTCTTCC-T-TSSCCCB---CCCSSSS
T ss_pred hCccCCCcchhhHHHHHHHHHhccccCcccchHHHHHHHHHHHH---H-----HhcccCC-c-ceEEEEE---cCCCCcc
Confidence 9999986 78999999999886 3456788887743 1 111 110 0 0122211 0112211
Q ss_pred cccccccCCceeEeccceeecccccccchhhhHHHHHHHHh-cCCCeEEEecCCChhhHHhHHhhhcccccceeeecCCC
Q psy14622 446 PYFINTAKGAKVEFQDALVLLSESKISSIQSIIPALELANS-KRKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPG 524 (788)
Q Consensus 446 pyfvt~~e~~~v~l~~p~ILitD~kI~~i~~IlP~Le~~~~-~~rpLLIIAedi~~eAL~~Lv~N~~rg~~~v~AVkaP~ 524 (788)
..++.+.++| |+...+.+ | .+ .+...+|+.-.++.+- ...+-.-+.+++|.
T Consensus 205 ----------ds~lv~G~~~--dk~~~~~~---p-----~~~~n~kIlll~~~le~~k--------~~~~~~~v~i~~~~ 256 (527)
T 3p9d_B 205 ----------DSFLDEGFIL--AKKFGNNQ---P-----KRIENAKILIANTTLDTDK--------VKIFGTKFKVDSTA 256 (527)
T ss_dssp ----------CCCEESSCCC--SCCCSSSC---C-----SCCSSCEEEEECSCSSCCC--------CSSCCCBCCCCHHH
T ss_pred ----------ccEEEEeEEE--ecccCCCC---C-----eeeecceEEEecccccccc--------ccccCceEEEcCHH
Confidence 1122233322 33333221 1 01 2334455556666531 11112223566665
Q ss_pred Ccc-----hhhhhhhhhH--hhhCCeEeccCCCCCcccccCcccccceeEEEEecCceEEEcCCCCHHHHHHHHHHHHHH
Q psy14622 525 FGD-----NRKATLQDLA--VATGGIVFGDEASPVKLEDLQATDLGSVGEIVITKDDTLILKGKGKKEDIDRRADQIRDQ 597 (788)
Q Consensus 525 fG~-----~R~~~LeDiA--ilTGg~vis~~~~g~~l~~v~~~~LG~a~~V~vt~d~Ttii~g~g~~~~I~~R~~~l~~~ 597 (788)
+-+ +|+.+++.+. +.+|..++-.. ...++....+|+.++-+.+ +. ++.
T Consensus 257 ~l~~~~~~E~~~l~~~l~~I~~~g~~vvi~~---~~I~~~al~~L~~~~i~av--------~~---~~~----------- 311 (527)
T 3p9d_B 257 KLAQLEKAEREKMKNKIAKISKFGINTFINR---QLIYDYPEQLFTDLGINSI--------EH---ADF----------- 311 (527)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTCCBEEESS---CCCTTTHHHHHHHTCBCCC--------CC---CHH-----------
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCEEEEC---CCCCHHHHHHHHHCCCEEE--------ec---CCH-----------
Confidence 432 2333333333 34888865433 2557778889998764333 21 111
Q ss_pred HHhcCChHHHHHHHHHHHhhcCCeEEEEecCCchhhHHHHHHHHHHHHHHHHHHHHhccccCCchhHhhHHHHhhhhhcc
Q psy14622 598 IEATTSDYEREKLQERLARLASGVAVLKVGGSSEVEVNEKKDRVTDALNATRAAVEEGIVPGGGTALLRCIAVLDKLETA 677 (788)
Q Consensus 598 ~~~~~s~~~~~~L~eRla~LsggvAvI~VGG~Te~EikErk~r~edAl~a~raA~e~GiVpGGG~all~as~~L~~~~~~ 677 (788)
. --+||++++|+..+-.+...+. +.+...
T Consensus 312 ----------~-dle~ia~~tGa~iv~~~~~~~~----------------------------------------~~LG~a 340 (527)
T 3p9d_B 312 ----------E-GVERLALVTGGEVVSTFDEPSK----------------------------------------CKLGEC 340 (527)
T ss_dssp ----------H-HHHHHHHHTCCCCCSTTSCCTT----------------------------------------SCEECS
T ss_pred ----------H-HHHHHHHHhCCEEecchhhCCH----------------------------------------HHCCCC
Confidence 0 1468999999766533211110 001000
Q ss_pred -Cc-cccCCChhhHHHHHHHHHHHHHhhcChhHHHHHHHHHHHhcc----CeEEEEecccH-HHHHHHHhcchHHHHHHH
Q psy14622 678 -NA-DQATGKKEDIDRRADQIRDQIEATTSDYEREKLQERLARLAS----GVAVLKVGGSS-VEIVKKALRQPCMTIATN 750 (788)
Q Consensus 678 -~~-~~~~G~~~~i~~r~~~l~~~~~~~~~~~d~~~l~eRla~Lsg----gvavi~vGa~~-~e~~e~~~r~~~a~~a~~ 750 (788)
.. ....| .+|+..|+| ++|+|.+||+| .++.|++.++.||++++|
T Consensus 341 ~~v~~~~ig----------------------------~~~~~~~~g~~~~~~~tI~lrg~te~~l~E~kr~i~DAl~~~r 392 (527)
T 3p9d_B 341 DVIEEIMLG----------------------------EQPFLKFSGCKAGEACTIVLRGATDQTLDEAERSLHDALSVLS 392 (527)
T ss_dssp BCCBCCCSS----------------------------SCCBCCBCSSCCSCCEECBCCTTCTTHHHHHHTHHHHHHHHHH
T ss_pred cEEEEEEec----------------------------ceEEEEEECCCCCCEEEEEEcCCCHHHHHHHHHHHHHHHHHHH
Confidence 00 11122 134555665 89999999998 999999999999999999
Q ss_pred hCCchH
Q psy14622 751 AGVDAS 756 (788)
Q Consensus 751 Aa~e~g 756 (788)
+++++|
T Consensus 393 ~av~~g 398 (527)
T 3p9d_B 393 QTTKET 398 (527)
T ss_dssp HHHHCC
T ss_pred HHHhcC
Confidence 999987
No 36
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1
Probab=99.70 E-value=2.4e-18 Score=164.65 Aligned_cols=93 Identities=35% Similarity=0.541 Sum_probs=88.2
Q ss_pred hccccccceeeeccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhcccccccccccccccccC
Q psy14622 156 AKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRF 235 (788)
Q Consensus 156 ~~~e~~d~~ILite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~~~ 235 (788)
..++|+|||||+|++||+++|+++|+||.+.+.++||+|||+|+++|||+|||+||+.+.+ +.+++|.|.|
T Consensus 20 m~~~le~p~ILitdkKIs~i~~llP~LE~v~~~~~pLlIIAedvegeaLatLvvNklrg~l---------~v~AVKAPgf 90 (145)
T 1srv_A 20 MEAVLEDAFILIVEKKVSNVRELLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTL---------SVAAVKAPGF 90 (145)
T ss_dssp TBEEEEEEEEEEESSEECCHHHHHHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHTTSC---------CEEEEECCSS
T ss_pred cEEEeeccEEEEecccccCHHHHHHHHHHHHHHCCCEEEEecccchhhhhhhhhhhhcccc---------eEEEEeCCCc
Confidence 3589999999999999999999999999999999999999999999999999999999988 5899999999
Q ss_pred CCccccccccceeecccccccCc
Q psy14622 236 GPEVRGLMLQGVDILADAMYRLP 258 (788)
Q Consensus 236 ~~~~r~~~L~~~~i~~~~~~~tp 258 (788)
|+ .|+.+|+|+.+++++.-+++
T Consensus 91 Gd-~Rk~~L~DiAilTGg~vise 112 (145)
T 1srv_A 91 GD-RRKEMLKDIAAVTGGTVISE 112 (145)
T ss_dssp HH-HHHHHHHHHHHHHTCCEECT
T ss_pred ch-hhHHHHHHHHHHhCCEEEcc
Confidence 97 78899999999999988875
No 37
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A
Probab=99.67 E-value=8.1e-18 Score=168.23 Aligned_cols=93 Identities=39% Similarity=0.584 Sum_probs=88.0
Q ss_pred hccccccceeeeccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhcccccccccccccccccC
Q psy14622 156 AKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRF 235 (788)
Q Consensus 156 ~~~e~~d~~ILite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~~~ 235 (788)
..|+|+|||||+|++||+++|+++|+||.+.+.++||||||+|+++|||+|||+||+...+ +.+++|.|.|
T Consensus 33 m~~~le~p~ILitdkKIs~i~~ilP~LE~v~~~~rpLlIIAEDvegEALatLvvNklrg~l---------~v~AVKAPgF 103 (201)
T 3osx_A 33 GSVELENPYILLVDKKISNIRELLPVLEGVAKASKPLVIIAEDVEGEALATLVVNNMRGIV---------KVASVKAPGF 103 (201)
T ss_dssp TBEEEESCEEEEEEEEECCHHHHHHHHHHHHTSSCCEEEEEEEECHHHHHHHHHHHHHTSC---------CEEEEECSSC
T ss_pred CEEEecCCeEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEeccccchhhhHHHHhhccceE---------EEEEEeCCCC
Confidence 3689999999999999999999999999999999999999999999999999999999988 4899999999
Q ss_pred CCccccccccceeecccccccCc
Q psy14622 236 GPEVRGLMLQGVDILADAMYRLP 258 (788)
Q Consensus 236 ~~~~r~~~L~~~~i~~~~~~~tp 258 (788)
|+ .|+.+|+|+.+++++.-++.
T Consensus 104 Gd-rRk~~L~DIAilTGg~vise 125 (201)
T 3osx_A 104 GD-RRKAMLQDIATLTNGTVISE 125 (201)
T ss_dssp HH-HHHHHHHHHHHHHTCCCBCG
T ss_pred cc-chhhhhHhHHHHhCCEEEec
Confidence 97 68899999999999998874
No 38
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis}
Probab=99.66 E-value=1.2e-17 Score=166.70 Aligned_cols=93 Identities=37% Similarity=0.583 Sum_probs=88.0
Q ss_pred hccccccceeeeccccchhhhhhhHHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhcccccccccccccccccC
Q psy14622 156 AKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRF 235 (788)
Q Consensus 156 ~~~e~~d~~ILite~ki~~iq~il~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~~~ 235 (788)
..|+|+|||||+|++||+++|+++|+||.+.++++||+|||+|+++|||+|||+||+.+.+ +.+++|.|.|
T Consensus 26 m~~~le~p~ILitdkKIs~i~~ilP~LE~~~~~~kpLlIIAedvegeaLatLvvNklrg~l---------~v~AVKAPgf 96 (194)
T 3m6c_A 26 QQAVLEDALILLHQDKISSLPDLLPLLEKVAGTGKPLLIVAEDVEGEALATLVVNAIRKTL---------KAVAVKGPYF 96 (194)
T ss_dssp TBEEEEEEEEEEBSSEECCHHHHHHHHHHHHHHTCCEEEEESEECHHHHHHHHHHHHHTSS---------CEEEEECSSC
T ss_pred cEEEEecceEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEecccccchhhhhhhhhccceE---------EEEEEECCCC
Confidence 4699999999999999999999999999999999999999999999999999999999988 4899999999
Q ss_pred CCccccccccceeecccccccCc
Q psy14622 236 GPEVRGLMLQGVDILADAMYRLP 258 (788)
Q Consensus 236 ~~~~r~~~L~~~~i~~~~~~~tp 258 (788)
|+ .|+.+|+|+.+++++.-++.
T Consensus 97 Gd-~Rk~~L~DiAilTGg~vise 118 (194)
T 3m6c_A 97 GD-RRKAFLEDLAVVTGGQVVNP 118 (194)
T ss_dssp HH-HHHHHHHHHHHHHTCCCBCG
T ss_pred ch-hhhhhhHhHHHhcCCeEEec
Confidence 97 68899999999999998874
No 39
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.63 E-value=1.1e-17 Score=190.67 Aligned_cols=197 Identities=13% Similarity=0.094 Sum_probs=152.3
Q ss_pred CccccccccceeecccccccC--c---cccccccc-ccc-cccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcce
Q psy14622 237 PEVRGLMLQGVDILADAMYRL--P---RVLRSQNL-TPL-LRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLV 309 (788)
Q Consensus 237 ~~~r~~~L~~~~i~~~~~~~t--p---~v~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (788)
++++..++..+..+++++++| | ++++.++| .|. ||||++++|.+.+.. |. +.++ .+++
T Consensus 10 ~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~h-P~----Akll----------~e~a 74 (512)
T 3iyg_Q 10 EEAVYRNIQACKELAQTTRTAYGPNGMNKMVINHLEKLFVTNDAATILRELEVQH-PA----AKMI----------VMAS 74 (512)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCC-HH----HHHH----------HHHH
Confidence 457778899999999999999 9 99999999 888 999999999998877 32 3442 3344
Q ss_pred eeccc--cCCcceeeEe---eecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhh----hhc
Q psy14622 310 ILAED--VDGEALSTLV---VGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVI----EGM 380 (788)
Q Consensus 310 ~~~~~--~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 380 (788)
.+-+| ||||||+++| +.++|.+.+++|.+|+.+.+|+++|.+.|++ +|+++ +.+
T Consensus 75 ~~qd~~~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~-----------------~L~~~~~~~~~~ 137 (512)
T 3iyg_Q 75 HMQEQEVGDGTNFVLVFAGALLELAEELLRLGLSVSEVIEGYEIACKKAHE-----------------ILPDLVCCSAKN 137 (512)
T ss_pred HHhhhhhCCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH-----------------HHHHhhcccCCC
Confidence 44445 9999999999 9999999999999999999999999999999 88888 778
Q ss_pred cccCCCCCchhhhhhhh----hHHHHHHHHHHhhhccCCC-CcEEEec---CCccceeEEEEEeeEeccccccccccccc
Q psy14622 381 KFDRGYISPYFIIELKL----VLEYYIQTYIYLCLKVGKE-GVITVKD---GKTLTDELEVIEGMKFDRGYISPYFINTA 452 (788)
Q Consensus 381 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~kvG~d-GvItvee---g~~~~~~lev~eG~~fd~GylSpyfvt~~ 452 (788)
+.+++.+.++|.+|+++ ..+.+++.+++++++||++ |+|++++ .+...-++ +-.++-.|+.=..-+
T Consensus 138 ~~~~~~l~~va~tsl~sK~~~~~~~i~~livdAv~~V~~~~~~i~v~~I~i~k~~Ggs~---~ds~lv~G~~~dk~~--- 211 (512)
T 3iyg_Q 138 LRDVDEVSSLLHTSVMSKQYGNEVFLAKLIAQACVSIFPDSGHFNVDNIRVCKILGSGV---HSSSVLHGMVFKKET--- 211 (512)
T ss_pred CCCHHHHHHHHHHHhCCCCccchHHHHHHHHHHHHHHhccCCcccHhHeeEeeccCCCc---ccceEEeeEEEecCc---
Confidence 88999999999999887 2356799999999999997 6787654 22222222 112344555411111
Q ss_pred CCceeEeccceeecccccc
Q psy14622 453 KGAKVEFQDALVLLSESKI 471 (788)
Q Consensus 453 e~~~v~l~~p~ILitD~kI 471 (788)
..|--.++||.|++.+..+
T Consensus 212 ~~~~~~~~n~kI~ll~~~l 230 (512)
T 3iyg_Q 212 EGDVTSVKDAKIAVYSCPF 230 (512)
T ss_pred CCCCcccccCceEEEeccc
Confidence 1244456788888888765
No 40
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.62 E-value=4.5e-17 Score=185.73 Aligned_cols=199 Identities=12% Similarity=0.081 Sum_probs=157.9
Q ss_pred ccCCCccccccccceeecccccccC--c---cccccccc-ccc-cccceeecchhhhhhhhhhhhhhhhhhHHHhhhccC
Q psy14622 233 VRFGPEVRGLMLQGVDILADAMYRL--P---RVLRSQNL-TPL-LRAKVEFQDALVLLSESKISSIQSIIPALELANSKR 305 (788)
Q Consensus 233 ~~~~~~~r~~~L~~~~i~~~~~~~t--p---~v~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (788)
-..|.++|..++..+..+++++++| | ++++.++| .|. ||||++++|++.+.. |. +.++
T Consensus 6 ~~~g~~~~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~h-P~----akll---------- 70 (518)
T 3iyg_D 6 RDKPAQIRFSNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLH-PA----ARML---------- 70 (518)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHhccCCCCCceeeeCCCCCeEEECCHHHHHHHcccch-HH----HHHH----------
Confidence 3456667888899999999999999 9 99999999 888 999999999998876 32 3332
Q ss_pred Ccceeeccc--cCCcceeeEe---eecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhc
Q psy14622 306 KPLVILAED--VDGEALSTLV---VGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGM 380 (788)
Q Consensus 306 ~~~~~~~~~--~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (788)
.+++.+-+| ||||||+++| +.++|.+.+++|.+|+.+.+|+++|.+.|++ .|++++.+
T Consensus 71 ~~~a~~qd~~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~-----------------~L~~~s~~ 133 (518)
T 3iyg_D 71 VELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIE-----------------ILTDMSRP 133 (518)
T ss_pred HHHHHHhhhhhCCCceeHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH-----------------HHHHheee
Confidence 333444444 9999999999 9999999999999999999999999999999 89999999
Q ss_pred cc--cCCCCCchhhhhhhhh-----HHHHHHHHHHhhhccCC---CCcEEEecCCccceeEEEEE--e-e----Eecccc
Q psy14622 381 KF--DRGYISPYFIIELKLV-----LEYYIQTYIYLCLKVGK---EGVITVKDGKTLTDELEVIE--G-M----KFDRGY 443 (788)
Q Consensus 381 ~~--~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~kvG~---dGvItveeg~~~~~~lev~e--G-~----~fd~Gy 443 (788)
+. +++.+.++|.+|++++ .+.+++.+++++++||. +|++.++ .+.+.+ | . ++-+|+
T Consensus 134 v~~~~~~~l~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~~~~d~~-------~I~V~k~~Gg~~~ds~lv~G~ 206 (518)
T 3iyg_D 134 VELSDRETLLNSAATSLNSKVVSQYSSLLSPMSVDAVMKVIDPATATSVDLR-------DIKIVKKLGGTIDDCELVEGL 206 (518)
T ss_pred CCCCChHHHHHHhHhhhccccchhhHHHHHHHHHHHHHHhhccccCCCcccc-------eEEEEEcCCCChhhheEeccE
Confidence 98 7899999999999886 57789999999999996 6666432 233332 3 2 344565
Q ss_pred c--ccccccccCCceeEeccceeecccccccch
Q psy14622 444 I--SPYFINTAKGAKVEFQDALVLLSESKISSI 474 (788)
Q Consensus 444 l--Spyfvt~~e~~~v~l~~p~ILitD~kI~~i 474 (788)
. ..|. + +|.-.++||+|++.+..++..
T Consensus 207 ~~dk~~~--~--~mp~~i~n~kIlll~~~Le~~ 235 (518)
T 3iyg_D 207 VLTQKVA--N--SGITRVEKAKIGLIQFCLSAP 235 (518)
T ss_pred EEecccc--c--CCCccccCceEEEEEeecccc
Confidence 4 2222 1 344467899999999987643
No 41
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=99.54 E-value=2.7e-17 Score=188.86 Aligned_cols=152 Identities=10% Similarity=0.100 Sum_probs=129.2
Q ss_pred cccCCCccccccccceeecccccccC--c---cccccccc-ccc-cccceeecchhhhhhhhhhhhhhhhhhHHHhhhcc
Q psy14622 232 DVRFGPEVRGLMLQGVDILADAMYRL--P---RVLRSQNL-TPL-LRAKVEFQDALVLLSESKISSIQSIIPALELANSK 304 (788)
Q Consensus 232 ~~~~~~~~r~~~L~~~~i~~~~~~~t--p---~v~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (788)
+-.+|.+++..++..+..+++++++| | ++++.++| .|. ||||++++|++.+... +|.++
T Consensus 18 ~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hP-----~Akll--------- 83 (550)
T 3p9d_G 18 DASQGKGQIISNINACVAVQEALKPTLGPLGSDILIVTSNQKTTISNDGATILKLLDVVHP-----AAKTL--------- 83 (550)
T ss_dssp CEEESHHHHHHHHHHHHHHHTTTGGGSTTTCCCEEEECSSSCEEEECCHHHHTTTSCCCSH-----HHHHH---------
T ss_pred chhhhHHHHHHHHHHHHHHHHHHHhccCCCCCcEEEECCCCCeEEECCHHHHHHHccCCCH-----HHHHH---------
Confidence 44567778888999999999999999 9 99999999 888 9999999999988652 24442
Q ss_pred CCcceeeccc--cCCcceeeEe---eecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhh
Q psy14622 305 RKPLVILAED--VDGEALSTLV---VGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEG 379 (788)
Q Consensus 305 ~~~~~~~~~~--~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (788)
.+++++-+| ||||||++|| +.++|.+-+++|.+|+.+.+|+++|.+.|++ .|++++.
T Consensus 84 -~e~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~-----------------~L~~~s~ 145 (550)
T 3p9d_G 84 -VDISRAQDAEVGDGTTSVTILAGELMKEAKPFLEEGISSHLIMKGYRKAVSLAVE-----------------KINELAV 145 (550)
T ss_dssp -HHHHHHHHTTTSSCHHHHHHHHHHHHHTTSHHHHSSSCTTHHHHHHHHHHHHHHH-----------------HHHHSEE
T ss_pred -HHHHHHhhhhhCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH-----------------HHHHhcc
Confidence 344444445 9999999999 9999999999999999999999999999999 8999999
Q ss_pred cccc-----CCCCCchhhhhhhh-----hHHHHHHHHHHhhhccCC
Q psy14622 380 MKFD-----RGYISPYFIIELKL-----VLEYYIQTYIYLCLKVGK 415 (788)
Q Consensus 380 ~~~~-----~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~kvG~ 415 (788)
++.. ++.+.++|.+|.++ ..+.+++.+++++++||+
T Consensus 146 ~v~~~~~~~~~~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~ 191 (550)
T 3p9d_G 146 DITSEKSSGRELLERCARTAMSSKLIHNNADFFVKMCVDAVLSLDR 191 (550)
T ss_dssp CCCCC------CHHHHHHHHHHHTTTGGGHHHHHHHHHHHHHHCCS
T ss_pred cCCCCcchhHHHHHHHHHHhccCccccccHhHHHHHHHHHHHHhCc
Confidence 9864 77999999999754 567789999999999985
No 42
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=99.51 E-value=3.4e-16 Score=178.39 Aligned_cols=153 Identities=9% Similarity=-0.016 Sum_probs=130.8
Q ss_pred cccCCCccccccccceeecccccccC--c---cccccccc---ccc-cccceeecchhhhhhhhhhhhhhhhhhHHHhhh
Q psy14622 232 DVRFGPEVRGLMLQGVDILADAMYRL--P---RVLRSQNL---TPL-LRAKVEFQDALVLLSESKISSIQSIIPALELAN 302 (788)
Q Consensus 232 ~~~~~~~~r~~~L~~~~i~~~~~~~t--p---~v~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (788)
+-.||.++|..++.++..+++++++| | ++++.++| .|. ||||++++|++.+... ++.++
T Consensus 4 ~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~~~G~~~iTnDG~tIlk~i~v~hp-----~Akll------- 71 (513)
T 3iyg_B 4 DEERAETARLSSFIGAIAIGDLVKSTLGPKGMDKILLSSGRDASLMVTNDGATILKNIGVDNP-----AAKVL------- 71 (513)
T ss_pred chhhhHHHHHHHHHHHHHHHHHHHhccCCCCCeEEeecCCCCCCeEEECCHHHHHHHccccCH-----HHHHH-------
Confidence 45688889999999999999999999 9 88888877 466 9999999999988752 55553
Q ss_pred ccCCcceeeccc--cCCcceeeEe---eecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhh
Q psy14622 303 SKRKPLVILAED--VDGEALSTLV---VGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVI 377 (788)
Q Consensus 303 ~~~~~~~~~~~~--~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (788)
.+++.+-+| ||||||+++| +.++|.+-+++|.+|+.+.+|+++|.+.|++ .|+++
T Consensus 72 ---~e~a~~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~-----------------~L~~~ 131 (513)
T 3iyg_B 72 ---VDMSRVQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAARQ-----------------ALLNS 131 (513)
T ss_pred ---HHHHHHhhhhhCCChhhhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH-----------------HHHHh
Confidence 344444444 9999999999 9999999999999999999999999999999 89999
Q ss_pred hhccc-----cCCCCCchhhhhhh-----hhHHHHHHHHHHhhhccCCC
Q psy14622 378 EGMKF-----DRGYISPYFIIELK-----LVLEYYIQTYIYLCLKVGKE 416 (788)
Q Consensus 378 ~~~~~-----~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~kvG~d 416 (788)
+.++. +++.+.++|.++.+ ++.+.+++.+++++++||++
T Consensus 132 s~~v~~~~~~~~~~l~~va~tslssK~~~~~~~~i~~livdAv~~V~~~ 180 (513)
T 3iyg_B 132 AVDHGSDEVKFRQDLMNIAGTTLSSKLLTHHKDHFTKLAVEAVLRLKGS 180 (513)
T ss_pred CcCcccccccCHHHHHHHHHhhhcccccccchHHHHHHHHHHHHHhccc
Confidence 99987 67899999985544 36677899999999999976
No 43
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.37 E-value=1.3e-14 Score=165.50 Aligned_cols=157 Identities=11% Similarity=0.076 Sum_probs=124.9
Q ss_pred CCccccccccceeecccccccC--c---cccccccc-ccc-cccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcc
Q psy14622 236 GPEVRGLMLQGVDILADAMYRL--P---RVLRSQNL-TPL-LRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPL 308 (788)
Q Consensus 236 ~~~~r~~~L~~~~i~~~~~~~t--p---~v~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (788)
|.++|..++..+..++++++.| | ++++..++ .|. ||||++++|++.+.. |. +.++ -|+|..-+
T Consensus 7 g~~~~~~ni~a~~~la~~vkttLGP~G~~kml~~~~G~~~iTnDG~tIlk~i~v~h-P~----Akll--~e~a~~qd--- 76 (515)
T 3iyg_G 7 GRKVQSGNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQH-PA----AKSM--IEISRTQD--- 76 (515)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCcCCCCCeEEEECCCCCeEEECCHHHHHHhcccCC-HH----HHHH--HHHHHHhh---
Confidence 4456667888888999999999 9 88888899 888 999999999998876 32 3332 03333222
Q ss_pred eeeccccCCcceeeEe---eecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhcccc--
Q psy14622 309 VILAEDVDGEALSTLV---VGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFD-- 383 (788)
Q Consensus 309 ~~~~~~~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 383 (788)
.+-||||||+++| +-++|.+-++.|.+|+.+.+|+++|.+.|++ .|++++.++..
T Consensus 77 ---~e~GDGTTtvvvLAgeLL~~a~~ll~~GihP~~I~~G~~~A~~~a~~-----------------~L~~~s~~v~~~~ 136 (515)
T 3iyg_G 77 ---EEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMIS-----------------TLKKISIPVDTSN 136 (515)
T ss_pred ---hhhCCChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH-----------------HHHHhhcccCCCC
Confidence 1229999999999 8999999999999999999999999999999 89999999865
Q ss_pred CCCCCchhhhhhhhhHHHHHHHHHHhhhccCCCCcEEEe-cCC
Q psy14622 384 RGYISPYFIIELKLVLEYYIQTYIYLCLKVGKEGVITVK-DGK 425 (788)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~kvG~dGvItve-eg~ 425 (788)
++.+.+++.+|.++ +. +++....++ +++.|++++|+ +++
T Consensus 137 ~~~l~~va~tsl~s-K~-i~~~~~~~~-~i~vdav~~V~~~~~ 176 (515)
T 3iyg_G 137 RDTMLNIINSSITT-KV-ISRWSSLAC-NIALDAVKTVQFEEN 176 (515)
T ss_pred HHHHHHHHHHHhcC-Cc-hhhHHHHHH-HHHHHHHHhcccccC
Confidence 57899999999854 32 244445555 79999999997 543
No 44
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.35 E-value=5.3e-14 Score=160.45 Aligned_cols=148 Identities=12% Similarity=0.110 Sum_probs=122.7
Q ss_pred CCccccccccceeecccccccC--c---cccccccc-ccc-cccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcc
Q psy14622 236 GPEVRGLMLQGVDILADAMYRL--P---RVLRSQNL-TPL-LRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPL 308 (788)
Q Consensus 236 ~~~~r~~~L~~~~i~~~~~~~t--p---~v~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (788)
|.+++..++..+..+++++++| | ++++.++| .|. ||||++++|.+.+.. |. +.++ .++
T Consensus 9 g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~h-P~----Akll----------~e~ 73 (515)
T 3iyg_H 9 GIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVH-PA----AKTL----------VDI 73 (515)
T ss_pred cHHHHHHHHHHHHHHHHHHhhCcCCCCCeEEEECCCCCeEEECCHHHHHHHccCCC-HH----HHHH----------HHH
Confidence 4455667788888999999999 9 89999999 888 999999999998876 32 3332 233
Q ss_pred eeeccc--cCCcceeeEe---eecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccc-
Q psy14622 309 VILAED--VDGEALSTLV---VGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKF- 382 (788)
Q Consensus 309 ~~~~~~--~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 382 (788)
+.+-+| ||||||+++| +.++|.+-+++|.+|+.+.+|+++|.+.|++ .|++++.++.
T Consensus 74 a~~qd~~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~-----------------~L~~~a~~v~~ 136 (515)
T 3iyg_H 74 AKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVN-----------------KIKEIAVTVKK 136 (515)
T ss_pred HHHhhceeCcchhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH-----------------HHHHhhccccc
Confidence 334444 9999999999 8999999999999999999999999999999 8999999984
Q ss_pred -c----CCCCCchhhhhhh-----hhHHHHHHHHHHhhhccCC
Q psy14622 383 -D----RGYISPYFIIELK-----LVLEYYIQTYIYLCLKVGK 415 (788)
Q Consensus 383 -~----~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~kvG~ 415 (788)
+ ++.+.++|.++.+ ...+.+++.+++++++||.
T Consensus 137 ~~~~~~~~~L~~va~tsl~sK~~s~~~~~i~~livdAv~~V~~ 179 (515)
T 3iyg_H 137 EDKVEQRKLLEKCAMTALSSKLISQQKAFFAKMVVDAVMMLDD 179 (515)
T ss_pred CChHHHHHHHHHHHHHHhcCCcccccHHHHHHHHHHHHHHhcc
Confidence 6 4555999987753 3457789999999999984
No 45
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=99.34 E-value=3.9e-15 Score=171.36 Aligned_cols=159 Identities=14% Similarity=0.078 Sum_probs=132.2
Q ss_pred ccccCCCccccccccceeecccccccC--c---cccccccc-ccc-cccceeecchhhhhhhhhhhhhhhhhhHHHhhhc
Q psy14622 231 KDVRFGPEVRGLMLQGVDILADAMYRL--P---RVLRSQNL-TPL-LRAKVEFQDALVLLSESKISSIQSIIPALELANS 303 (788)
Q Consensus 231 k~~~~~~~~r~~~L~~~~i~~~~~~~t--p---~v~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (788)
++..||.++|..++.++..+++++++| | ++++.+++ .|. ||||++++|++.+... +|.++
T Consensus 38 ~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP-----~Akll-------- 104 (562)
T 3p9d_E 38 KKRQHGLEAKKSHILAARSVASIIKTSLGPRGLDKILISPDGEITITNDGATILSQMELDNE-----IAKLL-------- 104 (562)
T ss_dssp CSCSHHHHHHHHHHHHHHHHHHHTTTSSSTTCCEEEEECSSSCEEEESCHHHHHHHSCCCSH-----HHHHH--------
T ss_pred ceecchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCEEEECCHHHHHHHccCCCH-----HHHHH--------
Confidence 456788889999999999999999999 9 89999999 888 9999999999988762 23442
Q ss_pred cCCcceeeccc--cCCcceeeEe---eecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhh
Q psy14622 304 KRKPLVILAED--VDGEALSTLV---VGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIE 378 (788)
Q Consensus 304 ~~~~~~~~~~~--~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (788)
.+++.+-+| ||||||++|| +.++|.+-|++|.+|+.+.+|+++|.+.|++ .|++++
T Consensus 105 --~e~a~~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~-----------------~L~~~s 165 (562)
T 3p9d_E 105 --VQLSKSQDDEIGDGTTGVVVLASALLDQALELIQKGIHPIKIANGFDEAAKLAIS-----------------KLEETC 165 (562)
T ss_dssp --HHHHHHHHHHTSSCTTHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHH-----------------HTTTTT
T ss_pred --HHHHHHHHhhcCCCcccHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH-----------------HHHHhc
Confidence 233334444 9999999999 9999999999999999999999999999999 899999
Q ss_pred hccccC------CCCCchhhhhhhhhHHHHHHHHHHhhhccCCCCcEEEecC
Q psy14622 379 GMKFDR------GYISPYFIIELKLVLEYYIQTYIYLCLKVGKEGVITVKDG 424 (788)
Q Consensus 379 ~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~kvG~dGvItveeg 424 (788)
.++.+. +.+.++|.+|+++. . ...+.+...+++.|++++|++.
T Consensus 166 ~~v~~~~~~~~~e~L~~vA~tSl~sK--~-i~~~~d~la~l~vdAV~~V~~~ 214 (562)
T 3p9d_E 166 DDISASNDELFRDFLLRAAKTSLGSK--I-VSKDHDRFAEMAVEAVINVMDK 214 (562)
T ss_dssp SSSSBCCCSSCHHHHHHHHHHHHSSS--T-TTTTHHHHHHHHHHHHHTSSTT
T ss_pred cCcCCCcchhhHHHHHHHHHHhcCCc--h-hHHHHHHHHHHHHHHheeeccc
Confidence 888753 46999999999873 2 2235666677888888888764
No 46
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=99.23 E-value=1.2e-13 Score=157.89 Aligned_cols=163 Identities=12% Similarity=0.061 Sum_probs=141.7
Q ss_pred cccccccCCCccccccccceeecccccccC--c---cccccccc-ccc-cccceeecchhhhhhhhhhhhhhhhhhHHHh
Q psy14622 228 AYAKDVRFGPEVRGLMLQGVDILADAMYRL--P---RVLRSQNL-TPL-LRAKVEFQDALVLLSESKISSIQSIIPALEL 300 (788)
Q Consensus 228 ~~~k~~~~~~~~r~~~L~~~~i~~~~~~~t--p---~v~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (788)
...|+..||.++|..++.++..+++++++| | ++++.++| .|. ||||++++|++.+.. |. +.++
T Consensus 9 ~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~h-P~----akll----- 78 (528)
T 3p9d_D 9 ATFKNKEKPQEVRKANIIAARSVADAIRTSLGPKGMDKMIKTSRGEIIISNDGHTILKQMAILH-PV----ARML----- 78 (528)
T ss_dssp CSSCBCCCHHHHHHHHHHHHHHHHHHHTTTSSTTCCCEEEECSSCCEEEECCHHHHHHHSCCCC-TT----HHHH-----
T ss_pred cccchhcchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEECCHHHHHHHcccCC-HH----HHHH-----
Confidence 345788999999999999999999999999 9 99999999 888 999999999998876 33 2331
Q ss_pred hhccCCcceeeccc--cCCcceeeEe---eecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhh
Q psy14622 301 ANSKRKPLVILAED--VDGEALSTLV---VGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELE 375 (788)
Q Consensus 301 ~~~~~~~~~~~~~~--~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (788)
.+++.+-+| ||||||++|| +.++|.+-++.|.+|+.+.+|+++|.+.|++ .|+
T Consensus 79 -----~e~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~-----------------~L~ 136 (528)
T 3p9d_D 79 -----VEVSAAQDSEAGDGTTSVVILTGALLGAAERLLNKGIHPTIIADSFQSAAKRSVD-----------------ILL 136 (528)
T ss_dssp -----HHHHHHHHHHTCSCSHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHH-----------------HHH
T ss_pred -----HHHHHHhhhhhCCChhhHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHH-----------------HHH
Confidence 333444444 9999999999 9999999999999999999999999999999 899
Q ss_pred hhhhccc--cCCCCCchhhhhhhh-----hHHHHHHHHHHhhhccCC--CCcEEEe
Q psy14622 376 VIEGMKF--DRGYISPYFIIELKL-----VLEYYIQTYIYLCLKVGK--EGVITVK 422 (788)
Q Consensus 376 ~~~~~~~--~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~kvG~--dGvItve 422 (788)
+++.++. +++.+.++|.+|+++ ..+.+++.+++++++||+ +|+|+++
T Consensus 137 ~~s~~v~~~~~e~l~~va~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~~i~v~ 192 (528)
T 3p9d_D 137 EMCHKVSLSDREQLVRAASTSLSSKIVSQYSSFLAPLAVDSVLKISDENSKNVDLN 192 (528)
T ss_dssp TTCCCCCSCCHHHHHHHHHHHSCSSSCSTTHHHHHHHHHHHHHTTCCTTTTCCCGG
T ss_pred HhhCCCCCCCHHHHHHHHHHHhcCCccchhHHHHHHHHHHHHHHhccccCCccceE
Confidence 9999987 789999999999986 367789999999999998 5777654
No 47
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=99.21 E-value=3.6e-13 Score=155.00 Aligned_cols=162 Identities=11% Similarity=0.065 Sum_probs=140.0
Q ss_pred ccccccCCCccccccccceeecccccccC--c---cccccccc-ccc-cccceeecchhhhhhhhhhhhhhhhhhHHHhh
Q psy14622 229 YAKDVRFGPEVRGLMLQGVDILADAMYRL--P---RVLRSQNL-TPL-LRAKVEFQDALVLLSESKISSIQSIIPALELA 301 (788)
Q Consensus 229 ~~k~~~~~~~~r~~~L~~~~i~~~~~~~t--p---~v~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (788)
-.|+..||.++|..++.++..+++++++| | ++++.++| .|. ||||++++|++.+.. |. +.++
T Consensus 15 ~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~h-P~----Akll------ 83 (559)
T 3p9d_A 15 LGGEKISGDDIRNQNVLATMAVANVVKSSLGPVGLDKMLVDDIGDFTVTNDGATILSLLDVQH-PA----GKIL------ 83 (559)
T ss_dssp SSCEEEETHHHHHHHHHHHHHHHHHTTTTSSTTCCEEEECCSSSCCCEECCHHHHHHHHCCCS-HH----HHHH------
T ss_pred ccccccchHHHHHHHHHHHHHHHHHHHhccCCCCCeeEeEcCCCCEEEECCHHHHHHHhcCCC-HH----HHHH------
Confidence 46899999999999999999999999999 9 99999999 888 999999999998876 32 3332
Q ss_pred hccCCcceeeccc--cCCcceeeEe---eecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhh
Q psy14622 302 NSKRKPLVILAED--VDGEALSTLV---VGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEV 376 (788)
Q Consensus 302 ~~~~~~~~~~~~~--~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (788)
.+++.+-+| ||||||++|| +.++|.+.++.|.+|+.+.+|+++|.+.|++ .|++
T Consensus 84 ----~e~a~~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~-----------------~L~~ 142 (559)
T 3p9d_A 84 ----VELAQQQDREIGDGTTSVVIIASELLKRANELVKNKIHPTTIITGFRVALREAIR-----------------FINE 142 (559)
T ss_dssp ----HHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHH-----------------HHHH
T ss_pred ----HHHHHHHHHHcCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH-----------------HHHH
Confidence 333444444 9999999999 9999999999999999999999999999999 8999
Q ss_pred -hhhcccc--CCCCCchhhhhhhh-----hHHHHHHHHHHhhhccCC-----CCcEEEe
Q psy14622 377 -IEGMKFD--RGYISPYFIIELKL-----VLEYYIQTYIYLCLKVGK-----EGVITVK 422 (788)
Q Consensus 377 -~~~~~~~--~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~kvG~-----dGvItve 422 (788)
++.++.. ++.+.++|.+|+++ ..+.+++.+++++++||+ +|+|+++
T Consensus 143 ~~s~~v~~~~~e~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~~~~~i~l~ 201 (559)
T 3p9d_A 143 VLSTSVDTLGKETLINIAKTSMSSKIIGADSDFFSNMVVDALLAVKTQNSKGEIKYPVK 201 (559)
T ss_dssp HTGGGSCC--CTTHHHHHHHTTSSSGGGTTHHHHHHHHHHHHHHHCCEESSSCEECCTT
T ss_pred hcccCCCCCCHHHHHHHHHHHhccCcccchhHHHHHHHHHHHHHhcccccCCCCccchh
Confidence 9999875 89999999999876 356689999999999995 3666543
No 48
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.16 E-value=4.7e-13 Score=152.62 Aligned_cols=203 Identities=13% Similarity=0.099 Sum_probs=156.3
Q ss_pred cccCCCccccccccceeecccccccC--c---cccccccc-ccc-cccceeecchhhhhhhhhhhhhhhhhhHHHhhhcc
Q psy14622 232 DVRFGPEVRGLMLQGVDILADAMYRL--P---RVLRSQNL-TPL-LRAKVEFQDALVLLSESKISSIQSIIPALELANSK 304 (788)
Q Consensus 232 ~~~~~~~~r~~~L~~~~i~~~~~~~t--p---~v~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (788)
+-.||.++|..++.++..+++++++| | ++++.++| .|. ||||++++|++.+.. | .++++
T Consensus 4 ~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~g~~~iTnDG~tIlk~i~~~h-P----~Akll--------- 69 (515)
T 3iyg_E 4 SRLMGLEALKSHIMAAKAVANTMKTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDH-Q----IAKLM--------- 69 (515)
T ss_pred hhhchHHHHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCCCeEEeCcHHHHHHHcccCC-H----HHHHH---------
Confidence 45688899999999999999999999 9 99999999 888 999999999998876 2 24442
Q ss_pred CCcceeeccc--cCCcceeeEe---eecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhh
Q psy14622 305 RKPLVILAED--VDGEALSTLV---VGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEG 379 (788)
Q Consensus 305 ~~~~~~~~~~--~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (788)
.+++.+-+| ||||||+++| +.++|.+-+++|.+|+.+.+|+++|.+.|++ +|++++.
T Consensus 70 -~~~a~~qd~~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~-----------------~L~~~s~ 131 (515)
T 3iyg_E 70 -VELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARIAIE-----------------HLDKISD 131 (515)
T ss_pred -HHHHHHhhhhhCCchhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH-----------------HHHHhce
Confidence 333444445 9999999999 9999999999999999999999999999999 8999999
Q ss_pred cccc----CCCCCchhhhhhhhhHHHHHHHHHHhhhccCCCCcEEEecCCc--cc-eeEEEEE--e-----eEeccccc-
Q psy14622 380 MKFD----RGYISPYFIIELKLVLEYYIQTYIYLCLKVGKEGVITVKDGKT--LT-DELEVIE--G-----MKFDRGYI- 444 (788)
Q Consensus 380 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~kvG~dGvItveeg~~--~~-~~lev~e--G-----~~fd~Gyl- 444 (788)
++.. ++.+.++|.+|+++. ..+ .+.+...+++.||+++|+++++ ++ +.+.+.+ | .++-.|+.
T Consensus 132 ~v~~~~~~~~~l~~vA~tsl~sK--~i~-~~~~~l~~l~~dav~~V~~~~~~~~d~~~I~I~k~~Ggs~~ds~lv~G~~~ 208 (515)
T 3iyg_E 132 SVLVDMKNTEPLIQTAKTTLGSK--VVN-SCHRQMAEIAVNAVLTVADMQRRDVDFELIKVEGKVGGRLEDTKLIKGVIV 208 (515)
T ss_pred ecCCCccCHHHHHHHHHHHhccc--chh-HHHHHHHHHHHHHHHhhcccccCCCCcccEEEEEecCCCcccceEEeeEEE
Confidence 8854 688999999999873 334 4788888999999999988654 21 2233332 2 23334443
Q ss_pred -ccccccccCCceeEeccceeeccccccc
Q psy14622 445 -SPYFINTAKGAKVEFQDALVLLSESKIS 472 (788)
Q Consensus 445 -Spyfvt~~e~~~v~l~~p~ILitD~kI~ 472 (788)
..|. +..|.-.++||.|++.+..+.
T Consensus 209 dk~~~---~~~m~~~~~~~kIall~~~le 234 (515)
T 3iyg_E 209 DKDFS---HPQMPKQVEDAKIAILTCPFE 234 (515)
T ss_pred ecccc---cccccccCCCceEEEEcCccc
Confidence 1111 223444567788887777653
No 49
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=99.13 E-value=9e-13 Score=151.51 Aligned_cols=157 Identities=13% Similarity=0.140 Sum_probs=132.3
Q ss_pred cccCCCccccccccceeecccccccC--c---cccccccc-ccc-cccceeecchhhhhhhhhhhhhhhhhhHHHhhhcc
Q psy14622 232 DVRFGPEVRGLMLQGVDILADAMYRL--P---RVLRSQNL-TPL-LRAKVEFQDALVLLSESKISSIQSIIPALELANSK 304 (788)
Q Consensus 232 ~~~~~~~~r~~~L~~~~i~~~~~~~t--p---~v~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (788)
+-.||.++|..++..+..+++++++| | ++++.++| .|. ||||++++|++.+... ++.++ -|+|..-
T Consensus 24 ~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP-----~Akll--~e~a~~q 96 (553)
T 3ko1_A 24 SRTYGKEAVRANIAAVKAVEEALKSTYGPRGMDKMLVDSLGDITITNDGATILDKMDLQHP-----AAKLL--VQIAKGQ 96 (553)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHGGGCSTTCCEEEEECTTSCEEEECCHHHHHHSSCCCSH-----HHHHH--HHHHHTC
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHhccCCcchhhHHHhhccceEEecCccchhhhhhccCh-----hHHHH--HHHhhCC
Confidence 45678888999999999999999999 9 89999999 888 9999999999988652 34442 1444333
Q ss_pred CCcceeeccccCCcceeeEe---eecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhcc
Q psy14622 305 RKPLVILAEDVDGEALSTLV---VGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMK 381 (788)
Q Consensus 305 ~~~~~~~~~~~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (788)
+ .+-||||||++|| +-++|.+-+++|.+|+.+.+|+++|.+.|++ .|++++.++
T Consensus 97 d------~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~-----------------~L~~~s~~v 153 (553)
T 3ko1_A 97 D------EETADGTKTAVIFSGELVKKAEDLLYKDVHPTIIISGYKKAEEVALQ-----------------TIQELAQTV 153 (553)
T ss_dssp S------SSSSTTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH-----------------HHHTTCEEC
T ss_pred c------ccccCCceeEEEehHHHHHhHHHHHhcCCCceEEehhhhHHHHHHHH-----------------HHHHhcCCC
Confidence 3 2239999999999 8999999999999999999999999999999 899999998
Q ss_pred c--cCCCCCchhhhhhhh-----hHHHHHHHHHHhhhccCCC--Cc
Q psy14622 382 F--DRGYISPYFIIELKL-----VLEYYIQTYIYLCLKVGKE--GV 418 (788)
Q Consensus 382 ~--~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~kvG~d--Gv 418 (788)
. +++.+.++|.+|+++ ..+.+++.+++++++||.+ |+
T Consensus 154 ~~~d~e~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~G~ 199 (553)
T 3ko1_A 154 SINDTDLLRKIAMTSLSSKAVAGAREYIADIVVKAVTQVAELRGDK 199 (553)
T ss_dssp CTTCHHHHHHHHHHHHTTSSCCTTHHHHHHHHHHHHHHHCCCTTSS
T ss_pred CCCcHHHHHHHHHHHhhHHhhhhHHHHHHHHHHHHHHHHHHhcCCc
Confidence 7 788999999999987 3667899999999999986 65
No 50
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=99.11 E-value=8e-13 Score=151.64 Aligned_cols=156 Identities=12% Similarity=0.099 Sum_probs=135.1
Q ss_pred cccCCCccccccccceeecccccccC--c---cccccccc-ccc-cccceeecchhhhhhhhhhhhhhhhhhHHHhhhcc
Q psy14622 232 DVRFGPEVRGLMLQGVDILADAMYRL--P---RVLRSQNL-TPL-LRAKVEFQDALVLLSESKISSIQSIIPALELANSK 304 (788)
Q Consensus 232 ~~~~~~~~r~~~L~~~~i~~~~~~~t--p---~v~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (788)
+-.+|.++|..++..+..+++++++| | ++++.++| .|. ||||++++|++.+... +|.++
T Consensus 13 ~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP-----~Akll--------- 78 (543)
T 3ruv_A 13 KRYMGRDAQRMNILAGRIIAETVRSTLGPKGMDKMLVDDLGDVVVTNDGVTILREMSVEHP-----AAKML--------- 78 (543)
T ss_dssp EEEETHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECTTSCEEEECCHHHHHHHSCCCCH-----HHHHH---------
T ss_pred chhccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCH-----HHHHH---------
Confidence 45567788899999999999999999 9 99999999 888 9999999999987652 34442
Q ss_pred CCcceeeccc--cCCcceeeEe---eecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhh
Q psy14622 305 RKPLVILAED--VDGEALSTLV---VGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEG 379 (788)
Q Consensus 305 ~~~~~~~~~~--~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (788)
.+++.+-+| ||||||++|| +.++|.+.++.|.+|+.+.+|+++|.+.|++ .|++++.
T Consensus 79 -~e~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~~-----------------~L~~~s~ 140 (543)
T 3ruv_A 79 -IEVAKTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQE-----------------LLKTIAC 140 (543)
T ss_dssp -HHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHH-----------------HHHHHCE
T ss_pred -HHHHHHHHhhhCCCcccHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHH-----------------HHHHhhC
Confidence 334444444 9999999999 9999999999999999999999999999999 8999999
Q ss_pred ccc--cCCCCCchhhhhhhh-----hHHHHHHHHHHhhhccCCC-CcE
Q psy14622 380 MKF--DRGYISPYFIIELKL-----VLEYYIQTYIYLCLKVGKE-GVI 419 (788)
Q Consensus 380 ~~~--~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~kvG~d-GvI 419 (788)
++. +++.+.++|.+|+++ ..+.+++.+++++++||.+ |++
T Consensus 141 ~v~~~d~~~L~~va~tsl~sK~~~~~~~~i~~livdAv~~V~~~~g~~ 188 (543)
T 3ruv_A 141 EVGAQDKEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDDEGKV 188 (543)
T ss_dssp ECCTTCHHHHHHHHHHHHHHTCGGGCCHHHHHHHHHHHHHHCCTTSCC
T ss_pred CCCCCCHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHhhccCCCc
Confidence 987 788999999999987 2566899999999999998 664
No 51
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=99.03 E-value=2.3e-12 Score=147.92 Aligned_cols=153 Identities=9% Similarity=0.021 Sum_probs=132.6
Q ss_pred ccccCCCccccccccceeecccccccC--c---cccccccc-ccc-cccceeecchhhhhhhhhhhhhhhhhhHHHhhhc
Q psy14622 231 KDVRFGPEVRGLMLQGVDILADAMYRL--P---RVLRSQNL-TPL-LRAKVEFQDALVLLSESKISSIQSIIPALELANS 303 (788)
Q Consensus 231 k~~~~~~~~r~~~L~~~~i~~~~~~~t--p---~v~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (788)
++..||.++|..++..+..+++++++| | ++++.+++ .|. ||||++++|++.+... +|.++
T Consensus 16 ~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP-----~Akll-------- 82 (548)
T 1q3q_A 16 TQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDCATILDKIDLQHP-----AAKMM-------- 82 (548)
T ss_dssp CEEEEHHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECTTCCEEEESCHHHHHHHSCCCSH-----HHHHH--------
T ss_pred cceechHHHHHHHHHHHHHHHHHHHhccCCCCceEEEEcCCCCeEEECCHHHHHHHhhccch-----HHHHH--------
Confidence 678899999999999999999999999 9 99999999 888 9999999999988763 34442
Q ss_pred cCCcceeeccc--cCCcceeeEe---eecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhh
Q psy14622 304 KRKPLVILAED--VDGEALSTLV---VGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIE 378 (788)
Q Consensus 304 ~~~~~~~~~~~--~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (788)
.+++.+-+| ||||||+++| +.++|.+-++.|.+|+.+.+|+++|.+.|++ +|++++
T Consensus 83 --~e~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~-----------------~L~~~s 143 (548)
T 1q3q_A 83 --VEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIITKGYALAAEKAQE-----------------ILDEIA 143 (548)
T ss_dssp --HHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH-----------------HHHHHC
T ss_pred --HHHHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH-----------------HHHHhc
Confidence 233333444 9999999999 9999999999999999999999999999999 999999
Q ss_pred hcccc--CCCCCchhh------hhhhhhHHHHHHHHHHhhhccCCC
Q psy14622 379 GMKFD--RGYISPYFI------IELKLVLEYYIQTYIYLCLKVGKE 416 (788)
Q Consensus 379 ~~~~~--~~~~~~~~~------~~~~~~~~~~~~~~~~~~~kvG~d 416 (788)
.++.. ++.+.+++. ++++. .+.+++.+++++++||++
T Consensus 144 ~~v~~~d~~~l~~va~tsl~sKi~~~~-~~~i~~livdAv~~V~~~ 188 (548)
T 1q3q_A 144 IRVDPDDEETLLKIAATSITGKNAESH-KELLAKLAVEAVKQVAEK 188 (548)
T ss_dssp EECCTTCHHHHHHHHHHHSCSSTTGGG-HHHHHHHHHHHHHHHCEE
T ss_pred CCCCCCCHHHHHHHHHHHhhccccccc-hHHHHHHHHHHHHHhccc
Confidence 99865 789999999 55554 455799999999999976
No 52
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=99.02 E-value=3.2e-12 Score=146.76 Aligned_cols=152 Identities=10% Similarity=0.060 Sum_probs=130.3
Q ss_pred ccccCCCccccccccceeecccccccC--c---cccccccc-ccc-cccceeecchhhhhhhhhhhhhhhhhhHHHhhhc
Q psy14622 231 KDVRFGPEVRGLMLQGVDILADAMYRL--P---RVLRSQNL-TPL-LRAKVEFQDALVLLSESKISSIQSIIPALELANS 303 (788)
Q Consensus 231 k~~~~~~~~r~~~L~~~~i~~~~~~~t--p---~v~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (788)
.+..||.++|..++..+..+++++++| | ++++.+++ .|. ||||++++|++.+... ++.++
T Consensus 15 ~~~~~g~~a~~~ni~a~~~la~~vkttLGP~G~~kml~~~~G~~~iTnDG~tIlk~i~v~hP-----~Akll-------- 81 (545)
T 1a6d_A 15 TQREQGKNAQRNNIEAAKAIADAVRTTLGPKGMDKMLVDSIGDIIISNDGATILKEMDVEHP-----TAKMI-------- 81 (545)
T ss_dssp --CEEHHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECSSSCEEEECCHHHHHHHSCCCSH-----HHHHH--------
T ss_pred chhhchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCcHHHHHHhhhccch-----HHHHH--------
Confidence 457788899999999999999999999 9 99999999 888 9999999999988763 34442
Q ss_pred cCCcceeeccc--cCCcceeeEe---eecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhh
Q psy14622 304 KRKPLVILAED--VDGEALSTLV---VGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIE 378 (788)
Q Consensus 304 ~~~~~~~~~~~--~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (788)
.+++.+-+| ||||||+++| +.++|.+-++.|.+|+.+.+|+++|.+.|++ +|++++
T Consensus 82 --~e~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~-----------------~L~~~s 142 (545)
T 1a6d_A 82 --VEVSKAQDTAVGDGTTTAVVLSGELLKQAETLLDQGVHPTVISNGYRLAVNEARK-----------------IIDEIA 142 (545)
T ss_dssp --HGGGGCTTTCSTTHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHH-----------------HHHHHC
T ss_pred --HHHHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH-----------------HHHHhc
Confidence 344444445 9999999999 9999999999999999999999999999999 899999
Q ss_pred hccc-cCCCCCchhhhh------hhhhHHHHHHHHHHhhhccCCC
Q psy14622 379 GMKF-DRGYISPYFIIE------LKLVLEYYIQTYIYLCLKVGKE 416 (788)
Q Consensus 379 ~~~~-~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~kvG~d 416 (788)
.+ . +++.+.+++.++ ++. .+.+++.+++++++||++
T Consensus 143 ~~-~~~~~~l~~va~tsl~sKi~~~~-~~~i~~livdAv~~v~~~ 185 (545)
T 1a6d_A 143 EK-STDDATLRKIALTALSGKNTGLS-NDFLADLVVKAVNAVAEV 185 (545)
T ss_dssp EE-CCCHHHHHHHHHHHTTTSSCCST-HHHHHHHHHHHHHHHCEE
T ss_pred CC-CCCHHHHHHHHHHHHhccccccc-HHHHHHHHHHHHHHHhcc
Confidence 88 6 678899999955 444 456799999999999976
No 53
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=99.00 E-value=6.9e-12 Score=143.89 Aligned_cols=160 Identities=8% Similarity=0.008 Sum_probs=130.0
Q ss_pred ccccCCCccccccccceeecccccccC--c---cccccccc-ccc-cccceeecchhhhhhhhhhhhhhhhhhHHHhhhc
Q psy14622 231 KDVRFGPEVRGLMLQGVDILADAMYRL--P---RVLRSQNL-TPL-LRAKVEFQDALVLLSESKISSIQSIIPALELANS 303 (788)
Q Consensus 231 k~~~~~~~~r~~~L~~~~i~~~~~~~t--p---~v~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (788)
.+..||.++|..++.++..+++++++| | ++++.+++ .|. ||||++++|++.+... ++.++ -|+|..
T Consensus 14 ~~~~~g~~a~~~ni~a~~~la~~vkttLGP~G~~kml~~~~g~~~iTnDG~tIlk~i~v~hP-----~Akll--~e~a~~ 86 (543)
T 1a6d_B 14 TKRESGKDAMKENIEAAIAISNSVRSSLGPRGMDKMLVDSLGDIVITNDGVTILKEMDVEHP-----AAKMM--VEVSKT 86 (543)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHTTSSTTCCCEEEECTTCCEEEECCHHHHHHHSCCCSH-----HHHHH--HHHHTC
T ss_pred chhhhhHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHhhccch-----HHHHH--HHHHHh
Confidence 457889999999999999999999999 9 99999999 888 9999999999988763 34442 144433
Q ss_pred cCCcceeeccccCCcceeeEe---eecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhc
Q psy14622 304 KRKPLVILAEDVDGEALSTLV---VGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGM 380 (788)
Q Consensus 304 ~~~~~~~~~~~~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (788)
-+ .+-||||||+++| +-++|.+-++.|.+|+.+.+|+++|.+.|++ .|++++.+
T Consensus 87 qd------~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~-----------------~L~~~a~~ 143 (543)
T 1a6d_B 87 QD------SFVGDGTTTAVIIAGGLLQQAQGLINQNVHPTVISEGYRMASEEAKR-----------------VIDEISTK 143 (543)
T ss_dssp TT------CCCTTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH-----------------HHHHHCEE
T ss_pred cC------CEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH-----------------HHHHhcCC
Confidence 32 2229999999999 9999999999999999999999999999999 89999999
Q ss_pred ccc--CCCCCchhh------hhhhhhHHHHHHHHHHhhhccCCC--CcEEE
Q psy14622 381 KFD--RGYISPYFI------IELKLVLEYYIQTYIYLCLKVGKE--GVITV 421 (788)
Q Consensus 381 ~~~--~~~~~~~~~------~~~~~~~~~~~~~~~~~~~kvG~d--GvItv 421 (788)
+.. ++.+.+++. ++++. .+.+++.+++++++||++ |+..+
T Consensus 144 v~~~~~~~l~~va~tsl~sKi~~~~-~~~i~~livdAv~~v~~~~~g~~~~ 193 (543)
T 1a6d_B 144 IGADEKALLLKMAQTSLNSKSASVA-KDKLAEISYEAVKSVAELRDGKYYV 193 (543)
T ss_dssp CCTTHHHHHHHHHHHHHTTSGGGGG-HHHHHHHHHHHHHHHEEECSSSEEE
T ss_pred CCCCCHHHHHHHHHHHhcccccccc-HHHHHHHHHHHHHHhcccccCCccc
Confidence 864 789999999 44554 455799999999999987 65433
No 54
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=99.00 E-value=1e-11 Score=142.04 Aligned_cols=151 Identities=11% Similarity=0.060 Sum_probs=130.2
Q ss_pred cccCCCccccccccceeecccccccC--c---cccccccc-ccc-cccceeecchhhhhhhhhhhhhhhhhhHHHhhhcc
Q psy14622 232 DVRFGPEVRGLMLQGVDILADAMYRL--P---RVLRSQNL-TPL-LRAKVEFQDALVLLSESKISSIQSIIPALELANSK 304 (788)
Q Consensus 232 ~~~~~~~~r~~~L~~~~i~~~~~~~t--p---~v~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (788)
+-.+|.++|..++..+..+++++..| | ++++..++ .|. ||||++++|.+.+... ++.++
T Consensus 4 ~~~~g~~a~~~ni~a~~~la~~v~ttlGP~G~~kml~~~~g~~~iTnDG~tIlk~i~v~hP-----~akll--------- 69 (529)
T 3iyg_A 4 DRSTGEAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHP-----AAKVL--------- 69 (529)
T ss_pred chhchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCCh-----HHHHH---------
Confidence 44678889999999999999999999 9 88888999 888 9999999999987762 34442
Q ss_pred CCcceeeccc--cCCcceeeEe---eecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhh-hh
Q psy14622 305 RKPLVILAED--VDGEALSTLV---VGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEV-IE 378 (788)
Q Consensus 305 ~~~~~~~~~~--~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 378 (788)
.+++.+-++ ||||||+++| +-++|.+-+++|.+|+.+.+|+++|.+.|++ .|++ ++
T Consensus 70 -~~~a~~qd~e~GDGTTtvvvLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~-----------------~L~~~~s 131 (529)
T 3iyg_A 70 -CELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVR-----------------YISENLI 131 (529)
T ss_pred -HHHHHHhhhhhCCChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH-----------------HHHHhcc
Confidence 233333334 9999999999 8999999999999999999999999999999 8888 88
Q ss_pred hccc--cCCCCCchhhhhhhh-----hHHHHHHHHHHhhhccC
Q psy14622 379 GMKF--DRGYISPYFIIELKL-----VLEYYIQTYIYLCLKVG 414 (788)
Q Consensus 379 ~~~~--~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~kvG 414 (788)
.++. +++.+.++|.+|.++ ..+.+++.+++++++||
T Consensus 132 ~~v~~~~~e~l~~va~tsl~sK~~~~~~~~i~~livdAv~~V~ 174 (529)
T 3iyg_A 132 INTDELGRDCLINAAKTSMSSKVIGINGDFFANLVVDAVLAIK 174 (529)
T ss_pred cCCCCCCHHHHHHHHHHHhccCcccccHHHHHHHHHHHHHHHh
Confidence 8887 789999999999764 56778999999999998
No 55
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=98.93 E-value=2.1e-11 Score=140.62 Aligned_cols=149 Identities=9% Similarity=0.034 Sum_probs=126.0
Q ss_pred CccccccccceeecccccccC--c---cccccccc-ccc-cccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcce
Q psy14622 237 PEVRGLMLQGVDILADAMYRL--P---RVLRSQNL-TPL-LRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLV 309 (788)
Q Consensus 237 ~~~r~~~L~~~~i~~~~~~~t--p---~v~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (788)
+++|..++..+..+++++++| | ++++.+++ .|. ||||++++|.+.+.. |. |.++ -|+|..-+
T Consensus 25 ~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~h-P~----Akll--~e~a~~qd---- 93 (568)
T 3p9d_H 25 DGQIIKSIAAIRELHQMCLTSMGPCGRNKIIVNHLGKIIITNDAATMLRELDIVH-PA----VKVL--VMATEQQK---- 93 (568)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSSSSSCEEEEECTTSCEEEESCHHHHTTTCCCCC-HH----HHHH--HHHHHHHH----
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCC-HH----HHHH--HHHHHhhh----
Confidence 457788899999999999999 9 89999999 888 999999999998866 22 3332 03333222
Q ss_pred eeccccCCcceeeEe---eecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhcc----c
Q psy14622 310 ILAEDVDGEALSTLV---VGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMK----F 382 (788)
Q Consensus 310 ~~~~~~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 382 (788)
.+-||||||+++| +.++|.+-+++|.+|+.+.+|+++|.+.|++ .|++++.++ .
T Consensus 94 --~e~GDGTTtvvvLa~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~e-----------------~L~~~a~~v~~~~~ 154 (568)
T 3p9d_H 94 --IDMGDGTNLVMILAGELLNVSEKLISMGLSAVEIIQGYNMARKFTLK-----------------ELDEMVVGEITDKN 154 (568)
T ss_dssp --TTSSSCHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHH-----------------HHHHHCCSCCCCCC
T ss_pred --ceeCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH-----------------HHHHhccccCCCCC
Confidence 2229999999999 9999999999999999999999999999999 899999887 6
Q ss_pred cCCCCCchhhhhhh-----hhHHHHHHHHHHhhhccCCC
Q psy14622 383 DRGYISPYFIIELK-----LVLEYYIQTYIYLCLKVGKE 416 (788)
Q Consensus 383 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~kvG~d 416 (788)
+++.+.+++.+|.+ .+ +.+++.+++++++|+++
T Consensus 155 ~~~~l~~va~tsl~sK~~~~~-~~i~~livdAv~~V~~~ 192 (568)
T 3p9d_H 155 DKNELLKMIKPVISSKKYGSE-DILSELVSEAVSHVLPV 192 (568)
T ss_dssp TTHHHHHHHHHHHTTTSTTCH-HHHHHHHHHHHTTSCC-
T ss_pred CHHHHHHHHHHHhhccCcchH-HHHHHHHHHHHHHHhhc
Confidence 78999999999964 46 88999999999999985
No 56
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=98.93 E-value=1.6e-11 Score=140.07 Aligned_cols=156 Identities=14% Similarity=0.091 Sum_probs=132.2
Q ss_pred CCCccccccccceeecccccccC--c---cccccccc-ccc-cccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCc
Q psy14622 235 FGPEVRGLMLQGVDILADAMYRL--P---RVLRSQNL-TPL-LRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKP 307 (788)
Q Consensus 235 ~~~~~r~~~L~~~~i~~~~~~~t--p---~v~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (788)
.|.+++..++..+..+++++++| | ++++.+++ .|. ||||++++|++.+.. | ++.++ .+
T Consensus 7 ~~~~a~~~ni~a~~~la~~vkttlGPkG~~kml~~~~g~~~iTnDG~tIlk~i~v~h-p----~akll----------~~ 71 (517)
T 3iyg_Z 7 RAQAALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLLHEMQIQH-P----TASLI----------AK 71 (517)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcC-H----HHHHH----------HH
Confidence 45556677788888999999999 9 89999999 888 999999999998765 2 34442 33
Q ss_pred ceeeccc--cCCcceeeEe---eecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhccc
Q psy14622 308 LVILAED--VDGEALSTLV---VGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKF 382 (788)
Q Consensus 308 ~~~~~~~--~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (788)
++.+-+| ||||||+++| +-++|.+.++.|.+|+.+.+|+++|.+.|++ +|++++.++.
T Consensus 72 ~a~~qd~e~GDGTTtvvvLa~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~-----------------~L~~~s~~v~ 134 (517)
T 3iyg_Z 72 VATAQDDITGDGTTSNVLIIGELLKQADLYISEGLHPRIITEGFEAAKEKALQ-----------------FLEQVKVSKE 134 (517)
T ss_pred HHHHHHHHhCCCceeHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH-----------------HHHhhCcCCC
Confidence 3334444 9999999999 8999999999999999999999999999999 8999999887
Q ss_pred -cCCCCCchhhhhhhhhHHHHHHHHHHhhhccCCCCcEEEecCC
Q psy14622 383 -DRGYISPYFIIELKLVLEYYIQTYIYLCLKVGKEGVITVKDGK 425 (788)
Q Consensus 383 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kvG~dGvItveeg~ 425 (788)
+++.+.++|.+|.++. ++..+.+...+++.||+++|++++
T Consensus 135 ~~~~~L~~va~tsl~sK---i~~~~~d~la~l~vdaV~~V~~~~ 175 (517)
T 3iyg_Z 135 MDRETLIDVARTSLRTK---VHAELADVLTEAVVDSILAIKKQD 175 (517)
T ss_pred CCHHHHHHHHHHHhccc---cchhHHHHHHHHHHHHhheeccCC
Confidence 8899999999999872 466777888889999999999875
No 57
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=98.90 E-value=1.6e-11 Score=140.96 Aligned_cols=178 Identities=11% Similarity=0.039 Sum_probs=147.0
Q ss_pred cccCCCccccccccceeecccccccC--c---cccccccc-ccc-cccceeecchhhhhhhhhhhhhhhhhhHHHhhhcc
Q psy14622 232 DVRFGPEVRGLMLQGVDILADAMYRL--P---RVLRSQNL-TPL-LRAKVEFQDALVLLSESKISSIQSIIPALELANSK 304 (788)
Q Consensus 232 ~~~~~~~~r~~~L~~~~i~~~~~~~t--p---~v~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (788)
+...|.+++..++..+..+++++++| | ++++.++| .|. ||||++++|++.+.. |. +.++
T Consensus 11 ~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~h-P~----akll--------- 76 (546)
T 3p9d_F 11 ESLRRDAALKVNVTSAEGLQSVLETNLGPKGTLKMLVDGAGNIKLTKDGKVLLTEMQIQS-PT----AVLI--------- 76 (546)
T ss_dssp EEEEHHHHHHHHHHHHTHHHHHHTTTSSTTCCEEEEECTTSCEEEECCHHHHHHTSCCCC-HH----HHHH---------
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcC-HH----HHHH---------
Confidence 34455567777888889999999999 9 99999999 888 999999999998776 33 3332
Q ss_pred CCcceeeccc--cCCcceeeEe---eecccceeecCCCCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhh
Q psy14622 305 RKPLVILAED--VDGEALSTLV---VGKEGVITVKDGKTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEG 379 (788)
Q Consensus 305 ~~~~~~~~~~--~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (788)
.+++.+-+| ||||||++|| +.++|.+-+++|.+|+.+.+|+++|.+.|++ .|++++.
T Consensus 77 -~e~a~~qd~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~-----------------~L~~~a~ 138 (546)
T 3p9d_F 77 -ARAAAAQDEITGDGTTTVVCLVGELLRQAHRFIQEGVHPRIITDGFEIARKESMK-----------------FLDEFKI 138 (546)
T ss_dssp -HHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHTTTTBCHHHHHHHHHHHHHHHHH-----------------HHHHHCC
T ss_pred -HHHHHHHHHHhCCCcccHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHH-----------------HHHHhhc
Confidence 233444444 9999999999 9999999999999999999999999999999 8999999
Q ss_pred cc----ccCCCCCchhhhhhhhhHHHHHHHHHHhhhccCCCCcEEEecCCccceeEEEEEeeEeccccc
Q psy14622 380 MK----FDRGYISPYFIIELKLVLEYYIQTYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFDRGYI 444 (788)
Q Consensus 380 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kvG~dGvItveeg~~~~~~lev~eG~~fd~Gyl 444 (788)
++ .+++.+.++|.+|+++ .+++.+.+...+++.||+++|+++++.+..++.++.+++..|-.
T Consensus 139 ~v~~~~~~~~~L~~vA~tsl~s---Ki~~~~~d~la~l~vdaV~~V~~~~~~~~dl~~I~i~ki~Gg~~ 204 (546)
T 3p9d_F 139 SKTNLSNDREFLLQVARSSLLT---KVDADLTEVLTPIVTDAVLSVYDAQADNLDLHMVEIMQMQHLSP 204 (546)
T ss_dssp CCSSSSTTCHHHHHHHHHHTCS---TTHHHHCSSHHHHHHHHHHHTHHHHHTTCCGGGEEEECCCCSCT
T ss_pred cccccccCHHHHHHHHHHHhCC---CcchhHHHHHHHHHHHhheEeecCCCCcccchheEEEEecCCCc
Confidence 98 5889999999999986 24677888888899999999987654445566778888877765
No 58
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=98.52 E-value=4.2e-07 Score=90.24 Aligned_cols=129 Identities=18% Similarity=0.262 Sum_probs=97.1
Q ss_pred EEEEeeEecccccccccccccCCceeEeccceeecccccccc-------------hhh-----------hHHHHHHHHhc
Q psy14622 432 EVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESKISS-------------IQS-----------IIPALELANSK 487 (788)
Q Consensus 432 ev~eG~~fd~GylSpyfvt~~e~~~v~l~~p~ILitD~kI~~-------------i~~-----------IlP~Le~~~~~ 487 (788)
++++|+-|+++..+|-| .-.++||.|++.+-.++- .++ +...++.+...
T Consensus 5 ~lv~Gvvl~k~~~~~~m-------pk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~ 77 (178)
T 1gml_A 5 CVLRGVMINKDVTHPRM-------RRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCEDIIQL 77 (178)
T ss_dssp SEEEEEEESCCCSSTTS-------CCEEESCCEEEESSCBSCC--------------CHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEEEEEEeccccCCCC-------CcccccceEEEEecccCCccccCccEEEECCHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 47899999999876644 334679999998877652 112 33445566677
Q ss_pred CCCeEEEecCCChhhHHhHHhhhcccccceeeecCCCCcchhhhhhhhhHhhhCCeEeccCCCCCcccccCcccccc-ee
Q psy14622 488 RKPLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATLQDLAVATGGIVFGDEASPVKLEDLQATDLGS-VG 566 (788)
Q Consensus 488 ~rpLLIIAedi~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~~~LeDiAilTGg~vis~~~~g~~l~~v~~~~LG~-a~ 566 (788)
+-.+++.-..|++.|+..|.-+++ .||+-. ++..|+.||..|||++++ ++++++.+.||+ |+
T Consensus 78 g~nVVl~~k~I~d~a~~~l~k~gI------~~vr~v-----~~~dleria~atGa~iv~------~~~~l~~~~LG~~~~ 140 (178)
T 1gml_A 78 KPDVVITEKGISDLAQHYLMRANV------TAIRRV-----RKTDNNRIARACGARIVS------RPEELREDDVGTGAG 140 (178)
T ss_dssp CCSEEEESSCBCHHHHHHHHHTTC------EEECCC-----CHHHHHHHHHHHCCCEES------CGGGCCGGGSBCCEE
T ss_pred CCcEEEECCcccHHHHHHHHHCCC------EEEecC-----CHHHHHHHHHHhCCeEeC------ChhhCChhhhCCccc
Confidence 878888889999999999997754 444332 567799999999999997 457888899999 99
Q ss_pred EEE---EecCceEEEcCCCCH
Q psy14622 567 EIV---ITKDDTLILKGKGKK 584 (788)
Q Consensus 567 ~V~---vt~d~Ttii~g~g~~ 584 (788)
.+. +..++++++.|..++
T Consensus 141 ~v~~~~ig~~~~~~~~gc~~~ 161 (178)
T 1gml_A 141 LLEIKKIGDEYFTFITDCKDP 161 (178)
T ss_dssp EEEEEEETTEEEEEEEEESST
T ss_pred EEEEEEECCeEEEEEECCCCC
Confidence 885 566788899886554
No 59
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=98.38 E-value=2.1e-08 Score=114.07 Aligned_cols=124 Identities=9% Similarity=-0.033 Sum_probs=78.2
Q ss_pred ccc-ccc-cccceeecchhhhhhhhhhhhhhhhhhHHHhhhccCCcceeeccc--cCCcceeeEe---eecccceeecCC
Q psy14622 264 QNL-TPL-LRAKVEFQDALVLLSESKISSIQSIIPALELANSKRKPLVILAED--VDGEALSTLV---VGKEGVITVKDG 336 (788)
Q Consensus 264 ~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~d~~~~~~~~---~~~~~~~~~~~~ 336 (788)
+++ .|. ||||++++|++.+... +|.+ ..+++.+-+| ||||||+++| +-++|.+-++.|
T Consensus 4 ~~~G~~~iTnDG~tIlk~i~v~hP-----~Akl----------l~e~a~~qd~e~GDGTTtvvvLa~~LL~~a~~ll~~G 68 (500)
T 3aq1_B 4 DSMGDIVITNDGATILKEMDIQHP-----AAKM----------IVEVSKTQDAEVGDGTTTAAVLSGELLSKAEELIMKG 68 (500)
T ss_dssp ------------------------------------------------------CCHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred CCCCCeEEECcHHHHHHhCcCCCH-----HHHH----------HHHHHHhhhhhhCCChHHHHHHHHHHHHHHHHHHHCC
Confidence 346 778 9999999999988763 3445 3555666666 9999999999 999999999999
Q ss_pred CCcchHHHHHHHHHHHHHhcCcccceeeccCCcchhhhhhhhhcccc--CCCCCchhhhh------hhhhHHHHHHHHHH
Q psy14622 337 KTLTDELEVIEAYIYLCLKVGKEGVITVKDGKTLTDELEVIEGMKFD--RGYISPYFIIE------LKLVLEYYIQTYIY 408 (788)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~------~~~~~~~~~~~~~~ 408 (788)
.+|+.+.+|+++|.+.|++ .|++++.++.. ++.+.+++.++ ++. .+.+++.+++
T Consensus 69 ihP~~I~~G~~~A~~~a~~-----------------~L~~~s~~v~~~d~~~l~~va~tsl~sKi~~~~-~~~i~~li~d 130 (500)
T 3aq1_B 69 VHSTIISEGYRHAAEKCRE-----------------ILETITIAISPDDEAALIKIAGTAITGKGAEAY-KEKLSALTVK 130 (500)
T ss_dssp CCHHHHHHHHHHHHHHHHH-----------------HHHHHCEECCTTCHHHHHHHHHTTCCSSSTTSS-HHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHH-----------------HHHHhcCCCCCCcHHHHHHHHHHHhhccccccc-HHHHHHHHHH
Confidence 9999999999999999999 89999999864 78899999944 544 4567999999
Q ss_pred hhhccCCC--CcEE
Q psy14622 409 LCLKVGKE--GVIT 420 (788)
Q Consensus 409 ~~~kvG~d--GvIt 420 (788)
++++||.+ |++.
T Consensus 131 Av~~v~~~~~g~~~ 144 (500)
T 3aq1_B 131 AVRSIVEEEEDGLK 144 (500)
T ss_dssp HHTTSEECCSSSCE
T ss_pred HHHHhcccccCCcc
Confidence 99999977 6543
No 60
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=98.31 E-value=1.9e-06 Score=84.17 Aligned_cols=126 Identities=21% Similarity=0.289 Sum_probs=95.5
Q ss_pred EEeeEecccccccccccccCCceeEeccceeecccccccc-------------hhh-----------hHHHHHHHHhcCC
Q psy14622 434 IEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESKISS-------------IQS-----------IIPALELANSKRK 489 (788)
Q Consensus 434 ~eG~~fd~GylSpyfvt~~e~~~v~l~~p~ILitD~kI~~-------------i~~-----------IlP~Le~~~~~~r 489 (788)
++|+-|+++..+|-|. -.++||.|++.+-.|+- ..+ +.-.++.+...+-
T Consensus 1 i~Gvv~~k~~~~~~mp-------k~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~ 73 (159)
T 1ass_A 1 MSGIVIDKEKVHSKMP-------DVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGA 73 (159)
T ss_dssp CCCEEESCCCSCTTSC-------SEEEEEEEEEESSCBSCCHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CceEEEecccCCCCCC-------cCcCCccEEEEecCcCCcccccceeEEECCHHHHHHHHHHHHHHHHHHhhhhhhCCC
Confidence 3699999998876552 24578999998877652 333 3345555667787
Q ss_pred CeEEEecCCChhhHHhHHhhhcccccceeeecCCCCcchhhhhhhhhHhhhCCeEeccCCCCCcccccCcccccceeEEE
Q psy14622 490 PLVILAEDVDGEALSTLVVNRLKIGLQVAAVKAPGFGDNRKATLQDLAVATGGIVFGDEASPVKLEDLQATDLGSVGEIV 569 (788)
Q Consensus 490 pLLIIAedi~~eAL~~Lv~N~~rg~~~v~AVkaP~fG~~R~~~LeDiAilTGg~vis~~~~g~~l~~v~~~~LG~a~~V~ 569 (788)
.++|.-..|++.|+..|.-+++ .||+-. ++..|+.||..|||++++ ++++++.+.||+|+.|.
T Consensus 74 nVVl~~k~I~d~a~~~l~k~gI------~~v~~v-----~~~dleria~atGa~iv~------~~~~l~~~~LG~~~~v~ 136 (159)
T 1ass_A 74 NVVLCQKGIDDVAQHYLAKEGI------YAVRRV-----KKSDMEKLAKATGAKIVT------DLDDLTPSVLGEAETVE 136 (159)
T ss_dssp SEEEESSCBCHHHHHHHHHTTC------EEECSC-----CHHHHHHHHHHHTCCCBS------STTSCCTTSCEEEEEEE
T ss_pred eEEEECCccCHHHHHHHHHCCC------EEEccC-----CHHHHHHHHHHhCCeeeC------ccccCCcccCccceEEE
Confidence 8888889999999999987754 444333 577799999999999997 45778889999999995
Q ss_pred ---EecCceEEEcCCCC
Q psy14622 570 ---ITKDDTLILKGKGK 583 (788)
Q Consensus 570 ---vt~d~Ttii~g~g~ 583 (788)
+..++++++.|..+
T Consensus 137 e~~ig~~~~~~~~g~~~ 153 (159)
T 1ass_A 137 ERKIGDDRMTFVMGCKN 153 (159)
T ss_dssp EEEETTEEEEEEESCC-
T ss_pred EEEECCeEEEEEECCCC
Confidence 56788999998654
No 61
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=43.74 E-value=9.4 Score=36.74 Aligned_cols=57 Identities=16% Similarity=0.095 Sum_probs=47.6
Q ss_pred HHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhcccccccccccccccccCCCccccccccceeecccccccC
Q psy14622 180 PALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRFGPEVRGLMLQGVDILADAMYRL 257 (788)
Q Consensus 180 ~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~~~~~~~r~~~L~~~~i~~~~~~~t 257 (788)
...+.+...+..+|+..++||.-++.-|..+.+..+++ .++..|+.+.-+|+|..++
T Consensus 63 ~~v~kI~~~g~nVVl~~k~I~d~a~~~l~k~gI~~v~~---------------------v~~~dleria~atGa~iv~ 119 (159)
T 1ass_A 63 QMVEKIKKSGANVVLCQKGIDDVAQHYLAKEGIYAVRR---------------------VKKSDMEKLAKATGAKIVT 119 (159)
T ss_dssp HHHHHHHHTTCSEEEESSCBCHHHHHHHHHTTCEEECS---------------------CCHHHHHHHHHHHTCCCBS
T ss_pred HHhhhhhhCCCeEEEECCccCHHHHHHHHHCCCEEEcc---------------------CCHHHHHHHHHHhCCeeeC
Confidence 34444567788899999999999999999999999997 6677888888888888777
No 62
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=38.69 E-value=12 Score=36.67 Aligned_cols=57 Identities=16% Similarity=0.034 Sum_probs=47.4
Q ss_pred HHHHHHhhcCCCeEEEeeccchhhHHHHHhhcchhhhhcccccccccccccccccCCCccccccccceeecccccccC
Q psy14622 180 PALELANSKRKPLVILAEDVDGEALSTLVMYRLPRVLRSQNLTPLLRRAYAKDVRFGPEVRGLMLQGVDILADAMYRL 257 (788)
Q Consensus 180 ~~l~~~~~~~~PlvIia~~id~~~L~~lv~n~l~~~~~~~~~~~~~~~~~~k~~~~~~~~r~~~L~~~~i~~~~~~~t 257 (788)
...+.+...+..+|+..++||.-++.-|..+.+..+++ .++..|+.+.-+|+|..++
T Consensus 69 ~~v~kI~~~g~nVVl~~k~I~d~a~~~l~k~gI~~vr~---------------------v~~~dleria~atGa~iv~ 125 (178)
T 1gml_A 69 QLCEDIIQLKPDVVITEKGISDLAQHYLMRANVTAIRR---------------------VRKTDNNRIARACGARIVS 125 (178)
T ss_dssp HHHHHHHTTCCSEEEESSCBCHHHHHHHHHTTCEEECC---------------------CCHHHHHHHHHHHCCCEES
T ss_pred HHHHHHhhcCCcEEEECCcccHHHHHHHHHCCCEEEec---------------------CCHHHHHHHHHHhCCeEeC
Confidence 34445567788899999999999999999999999986 6667888888888887777
No 63
>4e18_B Catenin alpha-1; four helix bundle, cell adhesion; 2.40A {Mus musculus}
Probab=37.04 E-value=18 Score=29.75 Aligned_cols=44 Identities=30% Similarity=0.568 Sum_probs=29.5
Q ss_pred HHHHHHHHhhcCCeEEEEecCCchhhHHHHHHHHHHHHHHHHHHHHh
Q psy14622 608 EKLQERLARLASGVAVLKVGGSSEVEVNEKKDRVTDALNATRAAVEE 654 (788)
Q Consensus 608 ~~L~eRla~LsggvAvI~VGG~Te~EikErk~r~edAl~a~raA~e~ 654 (788)
..|+|||.++-.|.+.| +.++....+||.+|-.--||+|.|+.+
T Consensus 6 ~~Lee~le~Iisgaa~~---Ads~~tr~~rke~Iv~eCnavrqALQd 49 (59)
T 4e18_B 6 PSLEERLESIISGAALM---ADSSCTRDDRRERIVAECNAVRQALQD 49 (59)
T ss_dssp CCHHHHHHHHHHHCC-------------CHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHH---HhhhccchhHHHHHHHHHHHHHHHHHH
Confidence 45788888888887776 456777889999999999999999875
No 64
>1c8b_A Spore protease; novel fold, hydrolase; 3.00A {Bacillus megaterium} SCOP: c.56.1.2
Probab=24.21 E-value=1.1e+02 Score=33.43 Aligned_cols=81 Identities=15% Similarity=0.135 Sum_probs=53.5
Q ss_pred cccCCceeEeccceeecccccccc--h-hhhHHHHHHHH-----hcCCCeEEEe---cCCChhhHHhHHhhhcc------
Q psy14622 450 NTAKGAKVEFQDALVLLSESKISS--I-QSIIPALELAN-----SKRKPLVILA---EDVDGEALSTLVVNRLK------ 512 (788)
Q Consensus 450 t~~e~~~v~l~~p~ILitD~kI~~--i-~~IlP~Le~~~-----~~~rpLLIIA---edi~~eAL~~Lv~N~~r------ 512 (788)
-.+.+.-+.++-|-+-..|..+.. + +.+..-|..+. +..++.|+++ ..+++|||--++++++.
T Consensus 66 GKp~G~YiTiE~p~l~~~D~~~~~~~v~~~la~~L~~ll~~~~i~~~~~iLVVGLGN~~vTpDALGP~Vv~~l~vTrHl~ 145 (371)
T 1c8b_A 66 GKKKGRYVTLESVGIREQDTEKQEEAMEEVFAKELNFFIKSLNIPDDASCLVVGLGNLSVTPDALGPKAVDNLLITRHLF 145 (371)
T ss_dssp HTTTTSCCEEEEEEECCCSSSSSSHHHHHHHHHHHHHHHHHTTCCTTCCEEEEECSCSSSGGGCHHHHHHTTCCCCHHHH
T ss_pred CCCCccEEEEecCCccccCHHHHHHHHHHHHHHHHHHHHhhccCCCCCcEEEEEcCCCCcCccccCcceeeeeeEEeehh
Confidence 345566667777877777776643 3 23444444444 3467899994 79999999999999986
Q ss_pred ---------cccceeeecCCCCcchhh
Q psy14622 513 ---------IGLQVAAVKAPGFGDNRK 530 (788)
Q Consensus 513 ---------g~~~v~AVkaP~fG~~R~ 530 (788)
+...|+|+-+.-+|..-.
T Consensus 146 ~~g~~~~~~~~~pVsAiaPGVmg~TGi 172 (371)
T 1c8b_A 146 ELQPESVQDGFRPVSAIVPGVMGMTGI 172 (371)
T ss_dssp HHSCCSSCSSCCCEEEECSGGGCCCSS
T ss_pred hhCchhhccCCCceEEecCCccccccc
Confidence 445777774444454443
No 65
>2rd5_A Acetylglutamate kinase-like protein; protein-protein complex, regulation of arginine biosynthesis nitrogen metabolism, kinase, transferase, transcription; HET: ARG ADP NLG ATP; 2.51A {Arabidopsis thaliana}
Probab=22.75 E-value=91 Score=32.46 Aligned_cols=47 Identities=19% Similarity=0.373 Sum_probs=31.0
Q ss_pred HHhhcCCeEEEEecCCchhhHHHHHHHHHHHHHHHHHHHHhc----cccCCchhH
Q psy14622 614 LARLASGVAVLKVGGSSEVEVNEKKDRVTDALNATRAAVEEG----IVPGGGTAL 664 (788)
Q Consensus 614 la~LsggvAvI~VGG~Te~EikErk~r~edAl~a~raA~e~G----iVpGGG~al 664 (788)
+.++.+...||++||..-.. .++++...+......+.| +|.|||-+.
T Consensus 31 i~~~~~k~iVIKlGGs~l~~----~~~~~~~~~~i~~l~~~G~~vViVhGgG~~i 81 (298)
T 2rd5_A 31 IQKFRGKTIVVKYGGAAMTS----PELKSSVVSDLVLLACVGLRPILVHGGGPDI 81 (298)
T ss_dssp HHHTTTCEEEEEECTHHHHC----HHHHHHHHHHHHHHHHTTCEEEEEECCHHHH
T ss_pred HHHhcCCEEEEEECchhhCC----hhHHHHHHHHHHHHHHCCCCEEEEECCcHHH
Confidence 45567889999999965332 234444555555555567 799998854
No 66
>2ymb_A MITD1, MIT domain-containing protein 1; protein transport, membrane, PLD; 3.40A {Homo sapiens}
Probab=22.54 E-value=79 Score=32.96 Aligned_cols=54 Identities=11% Similarity=0.286 Sum_probs=37.7
Q ss_pred cEEEecCCccceeEEEEEeeEecccccccccccccCCceeEeccceeecccccccchhhhHHHHHHHHhc
Q psy14622 418 VITVKDGKTLTDELEVIEGMKFDRGYISPYFINTAKGAKVEFQDALVLLSESKISSIQSIIPALELANSK 487 (788)
Q Consensus 418 vItveeg~~~~~~lev~eG~~fd~GylSpyfvt~~e~~~v~l~~p~ILitD~kI~~i~~IlP~Le~~~~~ 487 (788)
.|++++|. .|+.|++ ...||+ +..-.++.+++|||=. ...+.-++.++|.+.+.
T Consensus 99 ~i~I~~n~---------~G~sY~~-lFg~yl--~~~~~~i~i~DPYir~----~hQ~~Nl~~f~E~~vk~ 152 (257)
T 2ymb_A 99 QIKIEENA---------TGFSYES-LFREYL--NETVTEVWIEDPYIRH----THQLYNFLRFCEMLIKR 152 (257)
T ss_dssp EEEECTTC---------CSCCHHH-HSSTTC--STTCCEEEEECSCCCS----HHHHHHHHHHHHHHTC-
T ss_pred EEEECCCC---------ccccHHH-HHHHHH--hcCCeEEEEeCceecc----hHHHHHHHHHHHHHhhc
Confidence 56888886 4777776 458999 3344578889999843 34466688888888764
No 67
>2v5h_A Acetylglutamate kinase; amino-acid biosynthesis, transcription regulation, transfera cyanobacteria, transcription; HET: NLG; 2.75A {Synechococcus elongatus} PDB: 2jj4_A*
Probab=21.72 E-value=77 Score=33.56 Aligned_cols=47 Identities=23% Similarity=0.400 Sum_probs=30.6
Q ss_pred HHhhcCCeEEEEecCCchhhHHHHHHHHHHHHHHHHHHHHhc----cccCCchhH
Q psy14622 614 LARLASGVAVLKVGGSSEVEVNEKKDRVTDALNATRAAVEEG----IVPGGGTAL 664 (788)
Q Consensus 614 la~LsggvAvI~VGG~Te~EikErk~r~edAl~a~raA~e~G----iVpGGG~al 664 (788)
+.++.+...||++||..-.. ..+++...+......+.| +|.|||-+.
T Consensus 44 i~~~~~k~iVIKlGGs~l~~----~~~~~~l~~~i~~l~~~G~~vVlVhGgG~~i 94 (321)
T 2v5h_A 44 LQQFAGRTVVVKYGGAAMKQ----EELKEAVMRDIVFLACVGMRPVVVHGGGPEI 94 (321)
T ss_dssp HHHTTTCEEEEEECTHHHHS----HHHHHHHHHHHHHHHHTTCEEEEEECCHHHH
T ss_pred HHHhCCCeEEEEECchhhCC----chHHHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence 55677889999999965332 234444444444444557 799999854
No 68
>2ap9_A NAG kinase, acetylglutamate kinase, AGK; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.80A {Mycobacterium tuberculosis} SCOP: c.73.1.2
Probab=20.03 E-value=1.1e+02 Score=31.77 Aligned_cols=47 Identities=26% Similarity=0.368 Sum_probs=30.5
Q ss_pred HHhhcCCeEEEEecCCchhhHHHHHHHHHHHHHHHHHHHHhc----cccCCchhH
Q psy14622 614 LARLASGVAVLKVGGSSEVEVNEKKDRVTDALNATRAAVEEG----IVPGGGTAL 664 (788)
Q Consensus 614 la~LsggvAvI~VGG~Te~EikErk~r~edAl~a~raA~e~G----iVpGGG~al 664 (788)
+.++.+...||++||..-.. ..+++...+......+.| +|.|||-+.
T Consensus 20 i~~~~~k~iViKlGGs~l~~----~~~~~~~~~~i~~l~~~G~~vViVhGgG~~i 70 (299)
T 2ap9_A 20 LKQLHGKVVVVKYGGNAMTD----DTLRRAFAADMAFLRNCGIHPVVVHGGGPQI 70 (299)
T ss_dssp HHHHTTCEEEEEECTHHHHS----HHHHHHHHHHHHHHHTTTCEEEEEECCSHHH
T ss_pred HHHhCCCeEEEEECchhhCC----chHHHHHHHHHHHHHHCCCcEEEEECCcHHH
Confidence 45567888999999965321 234444455554445557 799998854
Done!