Query psy14623
Match_columns 622
No_of_seqs 150 out of 1459
Neff 7.7
Searched_HMMs 29240
Date Fri Aug 16 16:28:56 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14623.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14623hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ruv_A Chaperonin, CPN; double 100.0 9E-112 3E-116 942.7 55.9 519 15-586 3-521 (543)
2 1q3q_A Thermosome alpha subuni 100.0 2E-111 6E-116 941.1 57.4 538 15-604 6-545 (548)
3 3p9d_E T-complex protein 1 sub 100.0 2E-111 7E-116 942.1 52.2 531 11-586 22-560 (562)
4 3iyg_E T-complex protein 1 sub 100.0 3E-110 1E-114 926.7 60.1 512 27-583 3-514 (515)
5 3ko1_A Chaperonin; 9-fold symm 100.0 4E-111 1E-115 937.0 53.4 521 15-586 13-535 (553)
6 1a6d_B Thermosome (beta subuni 100.0 3E-110 1E-114 931.3 55.8 518 16-585 5-524 (543)
7 3iyg_A T-complex protein 1 sub 100.0 1E-109 3E-114 924.3 59.5 513 28-583 4-527 (529)
8 1a6d_A Thermosome (alpha subun 100.0 4E-110 1E-114 929.4 52.5 517 17-587 7-525 (545)
9 3iyg_G T-complex protein 1 sub 100.0 1E-108 4E-113 913.3 59.2 508 28-584 3-514 (515)
10 3iyg_H T-complex protein 1 sub 100.0 2E-108 6E-113 910.5 58.1 507 27-585 4-515 (515)
11 3iyg_B T-complex protein 1 sub 100.0 9E-108 3E-112 905.6 58.0 505 27-584 3-511 (513)
12 3p9d_A T-complex protein 1 sub 100.0 3E-108 9E-113 916.8 51.0 517 27-586 17-550 (559)
13 3iyg_D T-complex protein 1 sub 100.0 2E-107 7E-112 903.8 57.6 506 28-584 5-518 (518)
14 3p9d_G T-complex protein 1 sub 100.0 6E-109 2E-113 920.5 44.5 522 15-589 7-532 (550)
15 3iyg_Z T-complex protein 1 sub 100.0 2E-107 7E-112 902.5 55.1 504 28-584 4-517 (517)
16 3p9d_D T-complex protein 1 sub 100.0 2E-108 7E-113 912.7 40.2 508 27-584 12-528 (528)
17 3p9d_H T-complex protein 1 sub 100.0 7E-109 2E-113 922.8 35.9 527 7-586 1-550 (568)
18 3p9d_F T-complex protein 1 sub 100.0 3E-107 9E-112 908.0 41.2 514 27-587 10-540 (546)
19 3iyg_Q T-complex protein 1 sub 100.0 5E-105 2E-109 884.3 58.4 505 27-583 3-511 (512)
20 3p9d_C T-complex protein 1 sub 100.0 9E-107 3E-111 904.4 42.3 519 15-585 2-587 (590)
21 3p9d_B T-complex protein 1 sub 100.0 2E-106 9E-111 897.4 36.4 512 20-586 5-520 (527)
22 3aq1_B Thermosome subunit; gro 100.0 5E-101 2E-105 848.8 41.6 489 62-604 1-492 (500)
23 1we3_A CPN60(groel); chaperoni 100.0 1.3E-93 4.6E-98 794.0 48.1 469 27-588 3-529 (543)
24 1kp8_A Groel protein; chaperon 100.0 6.8E-94 2.3E-98 795.2 41.3 466 27-587 3-526 (547)
25 1iok_A Chaperonin 60; chaperon 100.0 3E-94 1E-98 798.6 32.3 467 27-587 4-528 (545)
26 3rtk_A 60 kDa chaperonin 2; he 100.0 4.9E-92 1.7E-96 778.2 33.6 465 27-587 3-524 (546)
27 1gml_A T-complex protein 1 sub 100.0 5.4E-35 1.8E-39 279.3 18.0 173 221-440 1-174 (178)
28 1ass_A Thermosome; chaperonin, 100.0 3.8E-30 1.3E-34 240.9 11.2 154 227-427 1-154 (159)
29 3m6c_A 60 kDa chaperonin 1; ch 99.4 4.3E-13 1.5E-17 125.6 8.2 156 225-455 3-170 (194)
30 1srv_A Protein (groel (HSP60 c 99.4 4.6E-13 1.6E-17 119.8 6.2 101 229-346 1-112 (145)
31 3osx_A 60 kDa chaperonin; alph 99.4 1.5E-12 5.2E-17 122.2 9.9 153 228-455 13-177 (201)
32 1o13_A Probable NIFB protein; 53.6 26 0.00089 30.6 6.5 52 290-342 68-119 (136)
33 2yx6_A Hypothetical protein PH 50.5 34 0.0012 29.0 6.6 53 289-342 54-106 (121)
34 1eo1_A Hypothetical protein MT 45.9 39 0.0013 28.7 6.3 52 290-342 57-108 (124)
35 2wfb_A Putative uncharacterize 43.8 40 0.0014 28.4 6.0 52 289-341 58-110 (120)
36 2re2_A Uncharacterized protein 39.4 60 0.002 28.3 6.5 50 289-340 70-119 (136)
37 1rdu_A Conserved hypothetical 33.9 40 0.0014 28.2 4.3 51 291-342 55-105 (116)
38 2xzm_U Ribosomal protein L7AE 30.7 1.2E+02 0.0042 26.0 6.9 50 289-341 31-85 (126)
39 2qtd_A Uncharacterized protein 29.3 1.2E+02 0.0041 24.7 6.5 47 292-340 50-96 (105)
40 3v7q_A Probable ribosomal prot 28.3 1.4E+02 0.0047 24.4 6.6 51 289-342 26-80 (101)
41 2lbw_A H/ACA ribonucleoprotein 26.1 1.3E+02 0.0043 25.6 6.1 49 289-340 27-80 (121)
42 3on1_A BH2414 protein; structu 24.6 1.4E+02 0.0046 24.4 5.9 51 289-342 25-79 (101)
43 3v7e_A Ribosome-associated pro 24.1 1.2E+02 0.0042 23.7 5.3 50 289-341 18-71 (82)
44 3iz5_f 60S ribosomal protein L 21.8 2.4E+02 0.0082 23.6 7.0 51 288-341 32-87 (112)
45 3psh_A Protein HI_1472; substr 20.2 1.8E+02 0.0062 28.6 7.0 51 292-342 78-154 (326)
46 2ale_A SNU13, NHP2/L7AE family 20.0 1.2E+02 0.004 26.4 4.8 50 289-341 39-93 (134)
No 1
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=100.00 E-value=8.7e-112 Score=942.67 Aligned_cols=519 Identities=40% Similarity=0.633 Sum_probs=494.6
Q ss_pred CCceeeeccchhhhhcccHHHHHHHHHHHHHHHHHhccccCccccceeeecCCCCeEEeccHHHHhhhcccCChhHHHHH
Q psy14623 15 GRPFIILRNQQEQKRIIGNDAIKSHIVAAKNIANTLKTSLGPKGLDKMMVSSDGDVTVTNDGATILKLMDVDHEIAKLMV 94 (622)
Q Consensus 15 ~~~~~~~~~~~~~~~~~g~~~~~~~~~a~~~la~~v~tslGP~G~~kmi~~~~g~~~ITnDG~tIl~~l~~~hP~akll~ 94 (622)
++| ++++++ .++.+|.+++.+|+.||+.|+++|||||||+||+|||+++.|+++|||||+|||++|+++||+|+|++
T Consensus 3 ~~p-~~l~~~--~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~ 79 (543)
T 3ruv_A 3 QQP-GVLPEN--MKRYMGRDAQRMNILAGRIIAETVRSTLGPKGMDKMLVDDLGDVVVTNDGVTILREMSVEHPAAKMLI 79 (543)
T ss_dssp -CC-CSSCSS--EEEEETHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECTTSCEEEECCHHHHHHHSCCCCHHHHHHH
T ss_pred CCC-eeecCC--cchhccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHHHHHHH
Confidence 468 778887 46689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhccccccCchhhHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhccccccCCCCCChHHHHHHHHHh
Q psy14623 95 QLSQSQDDEIGDGTTGVVVLAGALLEQAEHLLDKGIHPIRIADGFELAAQCAVKHLETIADSFPVNPDNLEPLIKTAMTT 174 (622)
Q Consensus 95 ~~a~~~~~~~GDGTtt~vlLa~~Ll~~a~~li~~gi~p~~Ii~g~~~a~~~~l~~L~~~s~~i~~~~~~~~~L~~va~ts 174 (622)
++|++||+++||||||++|||++||+++.+++++|+||+.|++||++|++.++++|++++++++ ..+++.|.++|+|+
T Consensus 80 e~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~--~~d~~~L~~va~ts 157 (543)
T 3ruv_A 80 EVAKTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELLKTIACEVG--AQDKEILTKIAMTS 157 (543)
T ss_dssp HHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHCEECC--TTCHHHHHHHHHHH
T ss_pred HHHHHHHhhhCCCcccHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHhhCCCC--CCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999977654 34689999999999
Q ss_pred hcCccchhhHHHHHHHHHHHHHHhcccccCCCCcccEEEEEccCCCccceeEEeeEEEeecCCCCCCCcccccceEEEec
Q psy14623 175 LGSKIINKCHRQMAEIAVNAVMAVADLEKRDVNFELIKVEGKVGGKLEDTMLVKGVVIDKDFSHPQMPKELRDVKLAILT 254 (622)
Q Consensus 175 l~sk~~~~~~~~la~lv~~Av~~v~~~~~~~~~~~~I~I~~~~G~~~~dS~li~Giv~~~~~~~~~~~~~~~n~ki~ll~ 254 (622)
++||+.+.++++|+++++||+.++++. ...+|+++|+|+++.|+++.||++++|++|+++|.||+|++.++|+||++++
T Consensus 158 l~sK~~~~~~~~i~~livdAv~~V~~~-~g~~dl~~I~V~k~~Gg~~~ds~lv~G~v~dk~~~~~~m~~~~~n~kIll~~ 236 (543)
T 3ruv_A 158 ITGKGAEKAKEKLAEIIVEAVSAVVDD-EGKVDKDLIKIEKKSGASIDDTELIKGVLVDKERVSAQMPKKVTDAKIALLN 236 (543)
T ss_dssp HHHTCGGGCCHHHHHHHHHHHHHHCCT-TSCCCGGGEEEEEEECSCGGGCEEESSEEESCCCSCTTSCSEEEEEEEEEES
T ss_pred hcccccchhHHHHHHHHHHHHHHhhcc-CCCcccceEEEEEcCCCCcccceeecceEEeccccCccccccccCcEEEEEc
Confidence 999999999999999999999999854 2348889999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCceeEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHCCCcEEeecCcccHHH
Q psy14623 255 CPFEPPRPKTKHNLDVQSVEDYKELRKYEQEKFASMVDKVKATGATLAICQWGFDDEANHLLLQKQLPAVRWVGGPDIEL 334 (622)
Q Consensus 255 ~~l~~~~~~~~~~~~i~~~~~l~~~~~~e~~~i~~~v~~l~~~g~~lVi~~~~I~~~al~~L~~~~I~~i~~v~~~~L~~ 334 (622)
++|++.+++.++++.+++++++..+.+.|+++++++++++.+.|++|||++++|++.+++||.++||++++++++++|+|
T Consensus 237 ~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~ve~I~~~g~~vvi~~~~I~~~al~~L~~~gI~~v~~v~k~~le~ 316 (543)
T 3ruv_A 237 CAIEIKETETDAEIRITDPAKLMEFIEQEEKMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKEGIVAARRVKKSDMEK 316 (543)
T ss_dssp SCBSCCCCSSCCCEEECSTTHHHHHHHHHHHHHHHHHHHHHHHTCSEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHHH
T ss_pred ccccccccccCceeEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCCccHHHHHHHHHcCcEEEeeCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCeeccCccchhhhhhcccccCcccccccccccCccccchhhhhcCCcccccccccCcccccccccEEEEEeccc
Q psy14623 335 IAIVTGGRIVPRFEELTSEKLGKAGLGNQFWYNQRSHAGHTDIELIAIVTGGRIVPRFEELTSEKLGKAGLVREISFGTT 414 (622)
Q Consensus 335 ia~~tGa~ii~~~~~l~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lG~~~~v~~~~~g~~ 414 (622)
||++|||++++++++ ++++++|+|+.|++..+|
T Consensus 317 ia~~tGa~iis~l~~---------------------------------------------l~~~~LG~a~~v~~~~ig-- 349 (543)
T 3ruv_A 317 LAKATGANVIAAIAA---------------------------------------------LSAQDLGDAGLVEERKIS-- 349 (543)
T ss_dssp HHHHHCCCEESCGGG---------------------------------------------CCGGGCEEEEEEEEEEET--
T ss_pred HHHHhCCceeccccc---------------------------------------------CCHHHCCcccEEEEEEeC--
Confidence 999999999998877 778899999999999998
Q ss_pred cceEEEEeccCCCceEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHhcCccccCCChhhhhHHHHHHHhhccccchhHHH
Q psy14623 415 KDHMLVIEECENSKAVTIFIRGGNKMIIEEAKRSIHDALCVVRNLVTENRVVYGGGAAEVSCAIAVAAEADKISSIEQYA 494 (622)
Q Consensus 415 ~~~~~~~~~~~~~~~~TIll~G~t~~~l~E~~~~l~dal~~~~~~l~~g~vvpGGGa~E~~ls~~L~~~~~~~~~~~~~~ 494 (622)
+++++||++|++++.|||+|||+|+.+++|.||+++|||+++|+++++|++|||||++|++|+.+|++++.++++++|++
T Consensus 350 ~~~~~~i~g~~~~~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~ 429 (543)
T 3ruv_A 350 GDSMIFVEECKHPKAVTMLIRGTTEHVIEEVARAVDDAVGVVGCTIEDGRIVSGGGSTEVELSMKLREYAEGISGREQLA 429 (543)
T ss_dssp TEEEEEEECCSSCSSEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHTCCTTHHHH
T ss_pred CceEEEEECCCCCceeEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhcCCeecCCcHHHHHHHHHHHHHhhcCChHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999998899999999
Q ss_pred HHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHhhhcCCCceEEEccCCcccccccCCcccchHHHHHHHHHHHHHHHHH
Q psy14623 495 FRAFADALESIPLALAENSGLSPIETLTEVKSRQVKEVNPALGIDCMLNGTNDMKQQNVIEALRSKKQQILLSTQLVKMI 574 (622)
Q Consensus 495 ~~~~a~AL~~ip~~L~~NaG~d~~~il~~L~~~~~~~~~~~~Gid~~~g~~~d~~~~gI~dp~~vk~~~L~~A~e~a~~l 574 (622)
+++|++||+.||++|++|||+|+.+++.+|++.|...++.++|||+.+|++.||++.|||||+.||+++|+.|+|+|++|
T Consensus 430 i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~a~~i 509 (543)
T 3ruv_A 430 VRAFADALEVIPRTLAENAGLDAIEILVKVRAAHASNGNKCAGLNVFTGAVEDMCENGVVEPLRVKTQAIQSAAESTEML 509 (543)
T ss_dssp HHHHHHHHTHHHHHHHHHTTCCHHHHHHHHHHHHTTTCCTTEEECTTTCSEEETTTTTCEEEHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCceeeeeCCCCccccHHHcCCEecHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999986334578999999999999999999999999999999999999999
Q ss_pred HhhhheecCCCC
Q psy14623 575 LKIDDIRSPNDG 586 (622)
Q Consensus 575 L~iD~iI~~~~~ 586 (622)
||+|++|...+.
T Consensus 510 L~id~ii~~~~~ 521 (543)
T 3ruv_A 510 LRIDDVIAAEKL 521 (543)
T ss_dssp HTCCEEEEEC--
T ss_pred HhHHhheecCcc
Confidence 999999987654
No 2
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=100.00 E-value=1.8e-111 Score=941.15 Aligned_cols=538 Identities=40% Similarity=0.604 Sum_probs=494.6
Q ss_pred CCceeeeccchhhhhcccHHHHHHHHHHHHHHHHHhccccCccccceeeecCCCCeEEeccHHHHhhhcccCChhHHHHH
Q psy14623 15 GRPFIILRNQQEQKRIIGNDAIKSHIVAAKNIANTLKTSLGPKGLDKMMVSSDGDVTVTNDGATILKLMDVDHEIAKLMV 94 (622)
Q Consensus 15 ~~~~~~~~~~~~~~~~~g~~~~~~~~~a~~~la~~v~tslGP~G~~kmi~~~~g~~~ITnDG~tIl~~l~~~hP~akll~ 94 (622)
++|.++++++ +++.+|.+++..|+.||+.|+++|||||||+||+|||+++.|+++|||||+|||++|+++||+|+|++
T Consensus 6 ~~~~~~l~~~--~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~ 83 (548)
T 1q3q_A 6 GQPVVILPEG--TQRYVGRDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDCATILDKIDLQHPAAKMMV 83 (548)
T ss_dssp ---CCCSCTT--CEEEEHHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECTTCCEEEESCHHHHHHHSCCCSHHHHHHH
T ss_pred CCCcccccCC--cceechHHHHHHHHHHHHHHHHHHHhccCCCCceEEEEcCCCCeEEECCHHHHHHHhhccchHHHHHH
Confidence 3576677777 46789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhccccccCchhhHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhccccccCCCCCChHHHHHHHHHh
Q psy14623 95 QLSQSQDDEIGDGTTGVVVLAGALLEQAEHLLDKGIHPIRIADGFELAAQCAVKHLETIADSFPVNPDNLEPLIKTAMTT 174 (622)
Q Consensus 95 ~~a~~~~~~~GDGTtt~vlLa~~Ll~~a~~li~~gi~p~~Ii~g~~~a~~~~l~~L~~~s~~i~~~~~~~~~L~~va~ts 174 (622)
++|++||+++||||||+++||++||+++.+++++|+||+.|++||++|++.++++|++++.+++ ..+++.|.++|+|+
T Consensus 84 e~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~--~~d~~~l~~va~ts 161 (548)
T 1q3q_A 84 EVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIITKGYALAAEKAQEILDEIAIRVD--PDDEETLLKIAATS 161 (548)
T ss_dssp HHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECC--TTCHHHHHHHHHHH
T ss_pred HHHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCC--CCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999987664 34689999999999
Q ss_pred hcCccchhhHHHHHHHHHHHHHHhcccc--cCCCCcccEEEEEccCCCccceeEEeeEEEeecCCCCCCCcccccceEEE
Q psy14623 175 LGSKIINKCHRQMAEIAVNAVMAVADLE--KRDVNFELIKVEGKVGGKLEDTMLVKGVVIDKDFSHPQMPKELRDVKLAI 252 (622)
Q Consensus 175 l~sk~~~~~~~~la~lv~~Av~~v~~~~--~~~~~~~~I~I~~~~G~~~~dS~li~Giv~~~~~~~~~~~~~~~n~ki~l 252 (622)
++||+.++++++|+++++||+.++++.. ...+|+++|+|++++|++++||++++|++|+++|.||+||++++|+||++
T Consensus 162 l~sKi~~~~~~~i~~livdAv~~V~~~~~g~~~~d~~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIll 241 (548)
T 1q3q_A 162 ITGKNAESHKELLAKLAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRVENAKIAL 241 (548)
T ss_dssp SCSSTTGGGHHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEEEEBSCGGGCEEESSEEESCCCSSTTSCSEESSEEEEE
T ss_pred hhccccccchHHHHHHHHHHHHHhccccCCCccccCCeEEEEEecCCCccceEEEeeEEEeccCCCCCCcceecCCEEEE
Confidence 9999999999999999999999997542 23578889999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCCCCCCceeEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHCCCcEEeecCcccH
Q psy14623 253 LTCPFEPPRPKTKHNLDVQSVEDYKELRKYEQEKFASMVDKVKATGATLAICQWGFDDEANHLLLQKQLPAVRWVGGPDI 332 (622)
Q Consensus 253 l~~~l~~~~~~~~~~~~i~~~~~l~~~~~~e~~~i~~~v~~l~~~g~~lVi~~~~I~~~al~~L~~~~I~~i~~v~~~~L 332 (622)
++++|++++++.++++.++++++++.+.++|++|++++++++.+.|++|||++++|++.|++||.++||.+++++++++|
T Consensus 242 ~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~~~k~~l 321 (548)
T 1q3q_A 242 INEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKYGIMAVRRVKKSDM 321 (548)
T ss_dssp ECSCBSCCCCSSCCCEEECSHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEESSCBCHHHHHHHHHTTCEEECSCCHHHH
T ss_pred EecCcCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCcCEEEEcCCcCHHHHHHHHHCCcEEEccCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCeeccCccchhhhhhcccccCcccccccccccCccccchhhhhcCCcccccccccCcccccccccEEEEEec
Q psy14623 333 ELIAIVTGGRIVPRFEELTSEKLGKAGLGNQFWYNQRSHAGHTDIELIAIVTGGRIVPRFEELTSEKLGKAGLVREISFG 412 (622)
Q Consensus 333 ~~ia~~tGa~ii~~~~~l~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lG~~~~v~~~~~g 412 (622)
+|||++|||++++++++ ++++.+|+|+.|++..+|
T Consensus 322 e~ia~~tGa~ii~~l~~---------------------------------------------~~~~~LG~a~~v~~~~ig 356 (548)
T 1q3q_A 322 EKLAKATGAKIVTNVKD---------------------------------------------LTPEDLGYAEVVEERKLA 356 (548)
T ss_dssp HHHHHHHCCCCBSSGGG---------------------------------------------CCGGGCEEESEEEEEEET
T ss_pred HHHHHHhCCeEeccccc---------------------------------------------CCHHHCCCceEEEEEEec
Confidence 99999999999998877 778889999999999998
Q ss_pred cccceEEEEeccCCCceEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHhcCccccCCChhhhhHHHHHHHhhccccchhH
Q psy14623 413 TTKDHMLVIEECENSKAVTIFIRGGNKMIIEEAKRSIHDALCVVRNLVTENRVVYGGGAAEVSCAIAVAAEADKISSIEQ 492 (622)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~TIll~G~t~~~l~E~~~~l~dal~~~~~~l~~g~vvpGGGa~E~~ls~~L~~~~~~~~~~~~ 492 (622)
+++|+||++|++++.|||+|||+|+.+++|.||+++|||+++|+++++|++|||||++|++|+.+|++++.++++++|
T Consensus 357 --~~~~~~~~g~~~~~~~TI~lrG~te~~l~E~er~l~DAl~~~r~a~~~~~ivpGGGa~e~~~~~~L~~~~~~~~g~~q 434 (548)
T 1q3q_A 357 --GENMIFVEGCKNPKAVTILIRGGTEHVIDEVERALEDAVKVVKDVMEDGAVLPAGGAPEIELAIRLDEYAKQVGGKEA 434 (548)
T ss_dssp --TEEEEEEECCSSCSSEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHSCEEEECTTHHHHHHHHHHHHHHHHHCHHHH
T ss_pred --CceEEEEecCCCCCeEEEEECCCChHHHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHHHHHHHHHHHhhhcCCcHH
Confidence 789999999999999999999999999999999999999999999999999999999999999999999988899999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHhhhcCCCceEEEccCCcccccccCCcccchHHHHHHHHHHHHHHH
Q psy14623 493 YAFRAFADALESIPLALAENSGLSPIETLTEVKSRQVKEVNPALGIDCMLNGTNDMKQQNVIEALRSKKQQILLSTQLVK 572 (622)
Q Consensus 493 ~~~~~~a~AL~~ip~~L~~NaG~d~~~il~~L~~~~~~~~~~~~Gid~~~g~~~d~~~~gI~dp~~vk~~~L~~A~e~a~ 572 (622)
+++++|++||+.||++|++|||+|+.+++++|++.|.. ++.++|||..+|++.||++.|||||+.||+++|+.|+|+|+
T Consensus 435 ~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~-~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~ 513 (548)
T 1q3q_A 435 LAIENFADALKIIPKTLAENAGLDTVEMLVKVISEHKN-RGLGIGIDVFEGKPADMLEKGIIEPLRVKKQAIKSASEAAI 513 (548)
T ss_dssp HHHHHHHHHTTHHHHHHHHHTTCCHHHHHHHHHHHHHH-HCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhc-CCCCcceeCCCCCccchhhcCCEecHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998864 34679999999999999999999999999999999999999
Q ss_pred HHHhhhheecCCCCCCchhhhhhhccCCcccc
Q psy14623 573 MILKIDDIRSPNDGICDEEMAAAWTSSMEVTA 604 (622)
Q Consensus 573 ~lL~iD~iI~~~~~~~~~~~~~~~~~~~~~~~ 604 (622)
+|||+|++|...+...+.++++++.++|++||
T Consensus 514 ~iL~iD~iI~~~~~~~~~~~~~~~~~~~~g~~ 545 (548)
T 1q3q_A 514 MILRIDDVIAAKATKPEGGQGGGMPGGMGGMD 545 (548)
T ss_dssp HHHTCCEEEECCC-------------------
T ss_pred HHHHHHHHHhcCCcCCCCCCCCCCCCCCCCCC
Confidence 99999999998664322111123457888776
No 3
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=100.00 E-value=2.2e-111 Score=942.08 Aligned_cols=531 Identities=60% Similarity=0.988 Sum_probs=496.8
Q ss_pred cCCCCCceeeeccchhhhhcccHHHHHHHHHHHHHHHHHhccccCccccceeeecCCCCeEEeccHHHHhhhcccCChhH
Q psy14623 11 MDEFGRPFIILRNQQEQKRIIGNDAIKSHIVAAKNIANTLKTSLGPKGLDKMMVSSDGDVTVTNDGATILKLMDVDHEIA 90 (622)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~a~~~la~~v~tslGP~G~~kmi~~~~g~~~ITnDG~tIl~~l~~~hP~a 90 (622)
.+.+++|+++++++..+++.+|.+++..|+.||+.|+++|||||||+||+|||+++.|+++|||||+|||++|+++||+|
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~A 101 (562)
T 3p9d_E 22 QDEMGRPFIIVKDQGNKKRQHGLEAKKSHILAARSVASIIKTSLGPRGLDKILISPDGEITITNDGATILSQMELDNEIA 101 (562)
T ss_dssp --------CCCSSBCCCSCSHHHHHHHHHHHHHHHHHHHTTTSSSTTCCEEEEECSSSCEEEESCHHHHHHHSCCCSHHH
T ss_pred HHhcCCCeEEeccCCcceecchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCEEEECCHHHHHHHccCCCHHH
Confidence 44467888888777556778999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhccccccCchhhHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhccccccCCCCCC--hHHHH
Q psy14623 91 KLMVQLSQSQDDEIGDGTTGVVVLAGALLEQAEHLLDKGIHPIRIADGFELAAQCAVKHLETIADSFPVNPDN--LEPLI 168 (622)
Q Consensus 91 kll~~~a~~~~~~~GDGTtt~vlLa~~Ll~~a~~li~~gi~p~~Ii~g~~~a~~~~l~~L~~~s~~i~~~~~~--~~~L~ 168 (622)
+|++++|++||+++||||||+++||++||+++.+++++|+||+.|++||++|++.++++|++++.+++.+..+ ++.|.
T Consensus 102 kll~e~a~~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~e~L~ 181 (562)
T 3p9d_E 102 KLLVQLSKSQDDEIGDGTTGVVVLASALLDQALELIQKGIHPIKIANGFDEAAKLAISKLEETCDDISASNDELFRDFLL 181 (562)
T ss_dssp HHHHHHHHHHHHHTSSCTTHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHTTTTTSSSSBCCCSSCHHHHH
T ss_pred HHHHHHHHHHHhhcCCCcccHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccCcCCCcchhhHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999998777654333 37899
Q ss_pred HHHHHhhcCccchhhHHHHHHHHHHHHHHhcccccCCCCcccEEEEEccCCCccceeEEeeEEEeecCCCCCCCccc---
Q psy14623 169 KTAMTTLGSKIINKCHRQMAEIAVNAVMAVADLEKRDVNFELIKVEGKVGGKLEDTMLVKGVVIDKDFSHPQMPKEL--- 245 (622)
Q Consensus 169 ~va~tsl~sk~~~~~~~~la~lv~~Av~~v~~~~~~~~~~~~I~I~~~~G~~~~dS~li~Giv~~~~~~~~~~~~~~--- 245 (622)
++|+||++||+++.+.++|+++++||+..+.+...+.+|+++|+|++++|++++||++++|++|+++|.||+||+++
T Consensus 182 ~vA~tSl~sK~i~~~~d~la~l~vdAV~~V~~~~~~~~d~~~I~I~k~~Ggs~~ds~lveGmv~dk~~~sp~m~~~~~~~ 261 (562)
T 3p9d_E 182 RAAKTSLGSKIVSKDHDRFAEMAVEAVINVMDKDRKDVDFDLIKMQGRVGGSISDSKLINGVILDKDFSHPQMPKCVLPK 261 (562)
T ss_dssp HHHHHHHSSSTTTTTHHHHHHHHHHHHHTSSTTTCSCCCCCCCEEEEESSSCGGGCEEESSEEESSCCCTTSCCC-----
T ss_pred HHHHHhcCCchhHHHHHHHHHHHHHHheeecccccCCCCcccEEEEEecCCChhhhceeeeEEEecCCCCCCcCcccccc
Confidence 99999999999999999999999999999875444578889999999999999999999999999999999999998
Q ss_pred ---ccceEEEecCCCCCCCCCCCceeEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHCCCc
Q psy14623 246 ---RDVKLAILTCPFEPPRPKTKHNLDVQSVEDYKELRKYEQEKFASMVDKVKATGATLAICQWGFDDEANHLLLQKQLP 322 (622)
Q Consensus 246 ---~n~ki~ll~~~l~~~~~~~~~~~~i~~~~~l~~~~~~e~~~i~~~v~~l~~~g~~lVi~~~~I~~~al~~L~~~~I~ 322 (622)
+++||+++++||++.+++.++++.++++++++.+.+.|+++++++++++.+.|++|||++++|++.+++||.++||.
T Consensus 262 ~~~~~~kIall~~~le~~k~~~~~~~~Iss~~~~~~~~~~E~~~l~~~lekI~~~g~~vvI~~~~I~~~Al~~L~~~~I~ 341 (562)
T 3p9d_E 262 EGSDGVKLAILTCPFEPPKPKTKHKLDISSVEEYQKLQTYEQDKFKEMIDDVKKAGADVVICQWGFDDEANHLLLQNDLP 341 (562)
T ss_dssp TTCSSCEECEEESCCSSCCCSSCCCCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHTCSCCEECSSCCSHHHHHHHTTTCC
T ss_pred cccccceEEEecccccccccccCceEEECCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCHHHHHHHHHCCCE
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeecCcccHHHHHHHhCCeeccCccchhhhhhcccccCcccccccccccCccccchhhhhcCCcccccccccCcccccc
Q psy14623 323 AVRWVGGPDIELIAIVTGGRIVPRFEELTSEKLGKAGLGNQFWYNQRSHAGHTDIELIAIVTGGRIVPRFEELTSEKLGK 402 (622)
Q Consensus 323 ~i~~v~~~~L~~ia~~tGa~ii~~~~~l~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lG~ 402 (622)
+++++++++|+|||++|||++++++++ ++++++|+
T Consensus 342 ~v~~v~k~~le~ia~~TGa~iis~l~~---------------------------------------------l~~~~LG~ 376 (562)
T 3p9d_E 342 AVRWVGGQELEHIAISTNGRIVPRFQD---------------------------------------------LSKDKLGT 376 (562)
T ss_dssp CEECCCTTTHHHHHHHHCCCEEESSSC---------------------------------------------CCTTSCEE
T ss_pred EEeccCHHHHHHHHHHhCCEEEecccc---------------------------------------------CCHHHCCc
Confidence 999999999999999999999998877 77889999
Q ss_pred cccEEEEEeccccceEEEEeccCCCceEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHhcCccccCCChhhhhHHHHHHH
Q psy14623 403 AGLVREISFGTTKDHMLVIEECENSKAVTIFIRGGNKMIIEEAKRSIHDALCVVRNLVTENRVVYGGGAAEVSCAIAVAA 482 (622)
Q Consensus 403 ~~~v~~~~~g~~~~~~~~~~~~~~~~~~TIll~G~t~~~l~E~~~~l~dal~~~~~~l~~g~vvpGGGa~E~~ls~~L~~ 482 (622)
|+.|+++.+|.++++++||++|++++.|||+|||+|+.+++|.||+++|||+++|+++++|++|||||++|++|+.+|++
T Consensus 377 a~~v~~~~ig~~~~~~~~i~g~~~~~~~TIllrG~te~~l~E~kr~i~DAL~~~r~av~~g~iVpGGGa~e~~~s~~L~~ 456 (562)
T 3p9d_E 377 CSRIYEQEFGTTKDRMLIIEQSKETKTVTCFVRGSNKMIVDEAERALHDSLCVVRNLVKDSRVVYGGGAAEVTMSLAVSE 456 (562)
T ss_dssp CSCEEEECCSSSSCCEEEECCCSCCSCCEEEEECTTTTTHHHHTHHHHHHHHHHHHHHHSCCEEETTTHHHHHHHHHHHH
T ss_pred ceEEEEEEeccCCceEEEEecCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCCcHHHHHHHHHHHH
Confidence 99999999985468999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccccchhHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHhhhcCCCceEEEccCCcccccccCCcccchHHHHH
Q psy14623 483 EADKISSIEQYAFRAFADALESIPLALAENSGLSPIETLTEVKSRQVKEVNPALGIDCMLNGTNDMKQQNVIEALRSKKQ 562 (622)
Q Consensus 483 ~~~~~~~~~~~~~~~~a~AL~~ip~~L~~NaG~d~~~il~~L~~~~~~~~~~~~Gid~~~g~~~d~~~~gI~dp~~vk~~ 562 (622)
++.++++++|+++++|++||+.||++|++|||+|+.+++++|++.|..+++.++|||+.+|++.||++.|||||+.||++
T Consensus 457 ~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~ 536 (562)
T 3p9d_E 457 EADKQRGIDQYAFRGFAQALDTIPMTLAENSGLDPIGTLSTLKSKQLKEKISNIGVDCLGYGSNDMKELFVVDPFIGKKQ 536 (562)
T ss_dssp HHHTTCTTHHHHHHHHHHHHTHHHHHHHHTTTSCHHHHHHHHHHHHHHTTTSSBCCBTTTTBCCBTTTTTCEEEHHHHHH
T ss_pred HhccCccHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCCceeEecCCCcccchHhccCEEcHHHHHH
Confidence 99889999999999999999999999999999999999999999998655678999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhheecCCCC
Q psy14623 563 QILLSTQLVKMILKIDDIRSPNDG 586 (622)
Q Consensus 563 ~L~~A~e~a~~lL~iD~iI~~~~~ 586 (622)
+|+.|+|+|++|||+|++|.+++.
T Consensus 537 al~~A~e~a~~iL~iD~ii~~~~~ 560 (562)
T 3p9d_E 537 QILLATQLCRMILKIDNVIISGKD 560 (562)
T ss_dssp HHHHHHHHHHHHHTEEEEEECCC-
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCC
Confidence 999999999999999999998754
No 4
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2.8e-110 Score=926.72 Aligned_cols=512 Identities=76% Similarity=1.192 Sum_probs=491.9
Q ss_pred hhhcccHHHHHHHHHHHHHHHHHhccccCccccceeeecCCCCeEEeccHHHHhhhcccCChhHHHHHHHHhhccccccC
Q psy14623 27 QKRIIGNDAIKSHIVAAKNIANTLKTSLGPKGLDKMMVSSDGDVTVTNDGATILKLMDVDHEIAKLMVQLSQSQDDEIGD 106 (622)
Q Consensus 27 ~~~~~g~~~~~~~~~a~~~la~~v~tslGP~G~~kmi~~~~g~~~ITnDG~tIl~~l~~~hP~akll~~~a~~~~~~~GD 106 (622)
+++.+|.+++..|+.||+.|+++|||||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++||+++||
T Consensus 3 ~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~g~~~iTnDG~tIlk~i~~~hP~Akll~~~a~~qd~~~GD 82 (515)
T 3iyg_E 3 KSRLMGLEALKSHIMAAKAVANTMKTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGD 82 (515)
T ss_pred chhhchHHHHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCCCeEEeCcHHHHHHHcccCCHHHHHHHHHHHHhhhhhCC
Confidence 46689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhccccccCCCCCChHHHHHHHHHhhcCccchhhHHH
Q psy14623 107 GTTGVVVLAGALLEQAEHLLDKGIHPIRIADGFELAAQCAVKHLETIADSFPVNPDNLEPLIKTAMTTLGSKIINKCHRQ 186 (622)
Q Consensus 107 GTtt~vlLa~~Ll~~a~~li~~gi~p~~Ii~g~~~a~~~~l~~L~~~s~~i~~~~~~~~~L~~va~tsl~sk~~~~~~~~ 186 (622)
||||+++||++||+++.+++.+|+||+.|++||++|++.++++|++++.+++.+..+++.|.++|+||+++|.++.+.++
T Consensus 83 GTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~l~~vA~tsl~sK~i~~~~~~ 162 (515)
T 3iyg_E 83 GTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARIAIEHLDKISDSVLVDMKNTEPLIQTAKTTLGSKVVNSCHRQ 162 (515)
T ss_pred chhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhceecCCCccCHHHHHHHHHHHhcccchhHHHHH
Confidence 99999999999999999999999999999999999999999999999887765545688999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCCcccEEEEEccCCCccceeEEeeEEEeecCCCCCCCcccccceEEEecCCCCCCCCCCCc
Q psy14623 187 MAEIAVNAVMAVADLEKRDVNFELIKVEGKVGGKLEDTMLVKGVVIDKDFSHPQMPKELRDVKLAILTCPFEPPRPKTKH 266 (622)
Q Consensus 187 la~lv~~Av~~v~~~~~~~~~~~~I~I~~~~G~~~~dS~li~Giv~~~~~~~~~~~~~~~n~ki~ll~~~l~~~~~~~~~ 266 (622)
|+++++||+..+.+.....+|+++|+|++++|++++||++++|++|+++|.||+||++++|+|++++++||++.+++.++
T Consensus 163 l~~l~~dav~~V~~~~~~~~d~~~I~I~k~~Ggs~~ds~lv~G~~~dk~~~~~~m~~~~~~~kIall~~~le~~k~~~~~ 242 (515)
T 3iyg_E 163 MAEIAVNAVLTVADMQRRDVDFELIKVEGKVGGRLEDTKLIKGVIVDKDFSHPQMPKQVEDAKIAILTCPFEPPKPKTKH 242 (515)
T ss_pred HHHHHHHHHHhhcccccCCCCcccEEEEEecCCCcccceEEeeEEEecccccccccccCCCceEEEEcCccccccccccc
Confidence 99999999999975444468888999999999999999999999999999999999999999999999999999999889
Q ss_pred eeEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHCCCcEEeecCcccHHHHHHHhCCeeccC
Q psy14623 267 NLDVQSVEDYKELRKYEQEKFASMVDKVKATGATLAICQWGFDDEANHLLLQKQLPAVRWVGGPDIELIAIVTGGRIVPR 346 (622)
Q Consensus 267 ~~~i~~~~~l~~~~~~e~~~i~~~v~~l~~~g~~lVi~~~~I~~~al~~L~~~~I~~i~~v~~~~L~~ia~~tGa~ii~~ 346 (622)
++.++++++++.|.+.|+++++++++++.+.|++|||++++|++.+++||.++||++++++++.+|+|||++|||+++++
T Consensus 243 ~~~is~~~~l~~~~~~E~~~l~~~lekI~~~g~~vvi~~~~I~~~al~~L~~~~I~~v~~v~k~~le~ia~~tGa~ii~~ 322 (515)
T 3iyg_E 243 KLDVTSVEDFKALQKYEKEKFEEMIRQIKETGANLAVCQWGFDDEANHLLLQNDLPAVRWVGGPEIELIAIATGGRIVPR 322 (515)
T ss_pred eeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCCCHHHHHHHHHCCCEEEeccCHHHHHHHHHHhCCEEecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ccchhhhhhcccccCcccccccccccCccccchhhhhcCCcccccccccCcccccccccEEEEEeccccceEEEEeccCC
Q psy14623 347 FEELTSEKLGKAGLGNQFWYNQRSHAGHTDIELIAIVTGGRIVPRFEELTSEKLGKAGLVREISFGTTKDHMLVIEECEN 426 (622)
Q Consensus 347 ~~~l~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lG~~~~v~~~~~g~~~~~~~~~~~~~~ 426 (622)
+++ ++++++|+|+.|+++.+|.++++++||++|++
T Consensus 323 l~~---------------------------------------------l~~~~LG~a~~v~~~~ig~~k~~~~~~~g~~~ 357 (515)
T 3iyg_E 323 FSE---------------------------------------------LTAEKLGFAGLVKEISFGTTKDKMLVIEQCKN 357 (515)
T ss_pred ccc---------------------------------------------CCHHHCCcceEEEEEEeccccceEEEEEcCCC
Confidence 877 77789999999999999954589999999999
Q ss_pred CceEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHhcCccccCCChhhhhHHHHHHHhhccccchhHHHHHHHHHHHHHHH
Q psy14623 427 SKAVTIFIRGGNKMIIEEAKRSIHDALCVVRNLVTENRVVYGGGAAEVSCAIAVAAEADKISSIEQYAFRAFADALESIP 506 (622)
Q Consensus 427 ~~~~TIll~G~t~~~l~E~~~~l~dal~~~~~~l~~g~vvpGGGa~E~~ls~~L~~~~~~~~~~~~~~~~~~a~AL~~ip 506 (622)
++.|||+|||+|+.+++|.||+++|||+++|+++++|++|||||++|++|+.+|++++.++++++|+++++|++||+.||
T Consensus 358 ~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip 437 (515)
T 3iyg_E 358 SRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADKCPTLEQYAMRAFADALEVIP 437 (515)
T ss_pred CceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHHhcCCcCCCCcHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998899999999999999999999
Q ss_pred HHHHhhcCCChHHHHHHHHHHhhhcCCCceEEEccCCcccccccCCcccchHHHHHHHHHHHHHHHHHHhhhheecC
Q psy14623 507 LALAENSGLSPIETLTEVKSRQVKEVNPALGIDCMLNGTNDMKQQNVIEALRSKKQQILLSTQLVKMILKIDDIRSP 583 (622)
Q Consensus 507 ~~L~~NaG~d~~~il~~L~~~~~~~~~~~~Gid~~~g~~~d~~~~gI~dp~~vk~~~L~~A~e~a~~lL~iD~iI~~ 583 (622)
++|++|||+|+.+++.+|++.|..+++.++|||+.+|++.||++.|||||+.||+++|+.|+|+|++|||||++|.+
T Consensus 438 ~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~iD~ii~~ 514 (515)
T 3iyg_E 438 MALAENSGMNPIQTMTEVRARQVKEVNPALGIDCLHKGTNDMKHQHVIETLIGKKQQISLATQMVRMILKIDDIRKP 514 (515)
T ss_pred HHHHHhCCCCHHHHHHHHHHHHhccCCCeeeEecCCCcccchHhccCEEcHHHHHHHHHHHHHHHHHHHhHHHhhcC
Confidence 99999999999999999999997655678999999999999999999999999999999999999999999999976
No 5
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=100.00 E-value=4.4e-111 Score=937.03 Aligned_cols=521 Identities=37% Similarity=0.616 Sum_probs=484.5
Q ss_pred CCceeeeccchhhhhcccHHHHHHHHHHHHHHHHHhccccCccccceeeecCCCCeEEeccHHHHhhhcccCChhHHHHH
Q psy14623 15 GRPFIILRNQQEQKRIIGNDAIKSHIVAAKNIANTLKTSLGPKGLDKMMVSSDGDVTVTNDGATILKLMDVDHEIAKLMV 94 (622)
Q Consensus 15 ~~~~~~~~~~~~~~~~~g~~~~~~~~~a~~~la~~v~tslGP~G~~kmi~~~~g~~~ITnDG~tIl~~l~~~hP~akll~ 94 (622)
++|+++++++ .++.+|.+++..|+.||+.|+++|||||||+||+|||+++.|+++|||||+|||++|+++||+|+|++
T Consensus 13 ~~~~~~l~~~--~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~ 90 (553)
T 3ko1_A 13 GIPVIILKEG--SSRTYGKEAVRANIAAVKAVEEALKSTYGPRGMDKMLVDSLGDITITNDGATILDKMDLQHPAAKLLV 90 (553)
T ss_dssp -----------------CHHHHHHHHHHHHHHHHHHGGGCSTTCCEEEEECTTSCEEEECCHHHHHHSSCCCSHHHHHHH
T ss_pred CCeEEEEecC--cccchhHHHHHHHHHHHHHHHHHHHhccCCcchhhHHHhhccceEEecCccchhhhhhccChhHHHHH
Confidence 5798889988 46789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhccccccCchhhHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhccccccCCCCCChHHHHHHHHHh
Q psy14623 95 QLSQSQDDEIGDGTTGVVVLAGALLEQAEHLLDKGIHPIRIADGFELAAQCAVKHLETIADSFPVNPDNLEPLIKTAMTT 174 (622)
Q Consensus 95 ~~a~~~~~~~GDGTtt~vlLa~~Ll~~a~~li~~gi~p~~Ii~g~~~a~~~~l~~L~~~s~~i~~~~~~~~~L~~va~ts 174 (622)
++|++||+++||||||++|||++||+++.+++++|+||+.|++||++|++.++++|++++++++ ..+++.|.++|+|+
T Consensus 91 e~a~~qd~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~--~~d~e~L~~vA~ts 168 (553)
T 3ko1_A 91 QIAKGQDEETADGTKTAVIFSGELVKKAEDLLYKDVHPTIIISGYKKAEEVALQTIQELAQTVS--INDTDLLRKIAMTS 168 (553)
T ss_dssp HHHHTCSSSSSTTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCEECC--TTCHHHHHHHHHHH
T ss_pred HHhhCCcccccCCceeEEEehHHHHHhHHHHHhcCCCceEEehhhhHHHHHHHHHHHHhcCCCC--CCcHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999977654 34689999999999
Q ss_pred hcCccchhhHHHHHHHHHHHHHHhccc--ccCCCCcccEEEEEccCCCccceeEEeeEEEeecCCCCCCCcccccceEEE
Q psy14623 175 LGSKIINKCHRQMAEIAVNAVMAVADL--EKRDVNFELIKVEGKVGGKLEDTMLVKGVVIDKDFSHPQMPKELRDVKLAI 252 (622)
Q Consensus 175 l~sk~~~~~~~~la~lv~~Av~~v~~~--~~~~~~~~~I~I~~~~G~~~~dS~li~Giv~~~~~~~~~~~~~~~n~ki~l 252 (622)
++||+.+.++++|+++++||+.++++. +...+|+++|+|+++.|+++.||++++|++|+++|.||+||+.++|+||++
T Consensus 169 l~sK~~~~~~~~i~~livdAv~~V~~~~~G~~~~dl~~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIll 248 (553)
T 3ko1_A 169 LSSKAVAGAREYIADIVVKAVTQVAELRGDKWYVDLDNIQIVKKAGGSINDTQLVYGIVVDKEVVHPGMPKRLENAKIAL 248 (553)
T ss_dssp HTTSSCCTTHHHHHHHHHHHHHHHCCCTTSSCCCCGGGEEEEECCCSCGGGCEEESEEEECSCBSCTTSCSCCBSCEEEE
T ss_pred hhHHhhhhHHHHHHHHHHHHHHHHHHhcCCceEEechhHHHHHHhCCccccceeeEEEEecccccCCCCccccccceEEE
Confidence 999999999999999999999999854 223488999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCCCCCCceeEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHCCCcEEeecCcccH
Q psy14623 253 LTCPFEPPRPKTKHNLDVQSVEDYKELRKYEQEKFASMVDKVKATGATLAICQWGFDDEANHLLLQKQLPAVRWVGGPDI 332 (622)
Q Consensus 253 l~~~l~~~~~~~~~~~~i~~~~~l~~~~~~e~~~i~~~v~~l~~~g~~lVi~~~~I~~~al~~L~~~~I~~i~~v~~~~L 332 (622)
++++|++.+++.++++.++++++++.+.+.|+++++++++++.+.|++|||++++|++.+++||.++||++++++++++|
T Consensus 249 ~d~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~vekI~~~g~~vvI~~~~I~~~al~~L~~~gI~~v~~v~k~~l 328 (553)
T 3ko1_A 249 IDASLEVEKPELDAEIRINDPTQMQKFLDEEENLIKEKVDKILATGANVIICQKGIDEVAQSYLAKKGVLAVRRAKKSDL 328 (553)
T ss_dssp ECSCBSCCCCTTTCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECSSCBCSHHHHHHHHHTCEEECCCCHHHH
T ss_pred ecCcccccCcccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhcceEEEeccChHHHHHHHHHhcchhhhhhhhhhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCeeccCccchhhhhhcccccCcccccccccccCccccchhhhhcCCcccccccccCcccccccccEEEEEec
Q psy14623 333 ELIAIVTGGRIVPRFEELTSEKLGKAGLGNQFWYNQRSHAGHTDIELIAIVTGGRIVPRFEELTSEKLGKAGLVREISFG 412 (622)
Q Consensus 333 ~~ia~~tGa~ii~~~~~l~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lG~~~~v~~~~~g 412 (622)
+|||++|||++++++++ ++++++|+|+.|++..+|
T Consensus 329 eria~~tGa~ivs~l~~---------------------------------------------l~~~~LG~a~~v~~~~ig 363 (553)
T 3ko1_A 329 EKLARATGGRVVSNIDE---------------------------------------------ISEQDLGYASLIEERKVG 363 (553)
T ss_dssp HHHHTTTTCCEESCGGG---------------------------------------------CCSSSSEECSEEECCCCS
T ss_pred HHHHHhhCCeeeccccc---------------------------------------------CChhhcchHHHHHHhhcC
Confidence 99999999999998877 778899999999999998
Q ss_pred cccceEEEEeccCCCceEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHhcCccccCCChhhhhHHHHHHHhhccccchhH
Q psy14623 413 TTKDHMLVIEECENSKAVTIFIRGGNKMIIEEAKRSIHDALCVVRNLVTENRVVYGGGAAEVSCAIAVAAEADKISSIEQ 492 (622)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~TIll~G~t~~~l~E~~~~l~dal~~~~~~l~~g~vvpGGGa~E~~ls~~L~~~~~~~~~~~~ 492 (622)
+++++||++|++++.|||+|||+|+.+++|.||+++|||+++|+++++|++|||||++|++|+.+|++++.++++++|
T Consensus 364 --~d~~~~i~g~~~~~~~TI~lrG~te~~l~E~er~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq 441 (553)
T 3ko1_A 364 --EDKMVFVEGAKNPKSISILIRGGLERLVDETERALRDALGTVADVIKDGRAIAGGGAVEIEIAKKLRKYAPQVGGKEQ 441 (553)
T ss_dssp --SSCCEEEESCSSSSCEEEEECCSSTTHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHHHCSHHH
T ss_pred --cceEEEeccCCCCceEEEeeeccHHHHHHHHHHHHHHHHHHHHHHhhcCceecCCceeEeHHHHHHHHhccccCChhH
Confidence 789999999999999999999999999999999999999999999999999999999999999999999988999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHhhhcCCCceEEEccCCcccccccCCcccchHHHHHHHHHHHHHHH
Q psy14623 493 YAFRAFADALESIPLALAENSGLSPIETLTEVKSRQVKEVNPALGIDCMLNGTNDMKQQNVIEALRSKKQQILLSTQLVK 572 (622)
Q Consensus 493 ~~~~~~a~AL~~ip~~L~~NaG~d~~~il~~L~~~~~~~~~~~~Gid~~~g~~~d~~~~gI~dp~~vk~~~L~~A~e~a~ 572 (622)
+++++|++||+.||++|++|||+|+.+++.+|++.|..+++.++|||+.+|++.||++.|||||+.||+++|+.|+|+|+
T Consensus 442 ~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~ 521 (553)
T 3ko1_A 442 LAVEAYANALESLVSILIENAGFDPIDLLMKLRSTHENENNKWYGIDLYAGQPVDMWQKGVIEPALVKMNAIKAATEAAT 521 (553)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHTTCSGGGTTEEEETTTTEEEESGGGSCEEETTHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHhhCcCCceEeEEeecCCchHHHHhCccchhhhhhhhhhhcchhhe
Confidence 99999999999999999999999999999999999875333689999999999999999999999999999999999999
Q ss_pred HHHhhhheecCCCC
Q psy14623 573 MILKIDDIRSPNDG 586 (622)
Q Consensus 573 ~lL~iD~iI~~~~~ 586 (622)
+|||+|++|...+.
T Consensus 522 ~iL~iD~ii~~~~~ 535 (553)
T 3ko1_A 522 LVLRIDDVVSAGKK 535 (553)
T ss_dssp HHHHEEEECCC---
T ss_pred EEEehHHHHHhhhh
Confidence 99999999987654
No 6
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=100.00 E-value=2.9e-110 Score=931.34 Aligned_cols=518 Identities=40% Similarity=0.636 Sum_probs=482.5
Q ss_pred CceeeeccchhhhhcccHHHHHHHHHHHHHHHHHhccccCccccceeeecCCCCeEEeccHHHHhhhcccCChhHHHHHH
Q psy14623 16 RPFIILRNQQEQKRIIGNDAIKSHIVAAKNIANTLKTSLGPKGLDKMMVSSDGDVTVTNDGATILKLMDVDHEIAKLMVQ 95 (622)
Q Consensus 16 ~~~~~~~~~~~~~~~~g~~~~~~~~~a~~~la~~v~tslGP~G~~kmi~~~~g~~~ITnDG~tIl~~l~~~hP~akll~~ 95 (622)
+|..+++++ .++.+|.+++..|+.||+.|+++|||||||+||+|||+++.|+++|||||+|||++|+++||+|+|+++
T Consensus 5 ~~~~~l~~~--~~~~~g~~a~~~ni~a~~~la~~vkttLGP~G~~kml~~~~g~~~iTnDG~tIlk~i~v~hP~Akll~e 82 (543)
T 1a6d_B 5 QPIFILKEG--TKRESGKDAMKENIEAAIAISNSVRSSLGPRGMDKMLVDSLGDIVITNDGVTILKEMDVEHPAAKMMVE 82 (543)
T ss_dssp -----------------CHHHHHHHHHHHHHHHHHHTTSSTTCCCEEEECTTCCEEEECCHHHHHHHSCCCSHHHHHHHH
T ss_pred cchhhcCCc--chhhhhHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHhhccchHHHHHHH
Confidence 576677777 467899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhccccccCchhhHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhccccccCCCCCChHHHHHHHHHhh
Q psy14623 96 LSQSQDDEIGDGTTGVVVLAGALLEQAEHLLDKGIHPIRIADGFELAAQCAVKHLETIADSFPVNPDNLEPLIKTAMTTL 175 (622)
Q Consensus 96 ~a~~~~~~~GDGTtt~vlLa~~Ll~~a~~li~~gi~p~~Ii~g~~~a~~~~l~~L~~~s~~i~~~~~~~~~L~~va~tsl 175 (622)
+|++||+++||||||+++||++||+++.+++++|+||+.|++||++|++.++++|++++++++ ..+++.|.++|+|++
T Consensus 83 ~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~--~~~~~~l~~va~tsl 160 (543)
T 1a6d_B 83 VSKTQDSFVGDGTTTAVIIAGGLLQQAQGLINQNVHPTVISEGYRMASEEAKRVIDEISTKIG--ADEKALLLKMAQTSL 160 (543)
T ss_dssp HHTCTTCCCTTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEECC--TTHHHHHHHHHHHHH
T ss_pred HHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCC--CCCHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999999987654 335889999999999
Q ss_pred cCccchhhHHHHHHHHHHHHHHhccc--ccCCCCcccEEEEEccCCCccceeEEeeEEEeecCCCCCCCcccccceEEEe
Q psy14623 176 GSKIINKCHRQMAEIAVNAVMAVADL--EKRDVNFELIKVEGKVGGKLEDTMLVKGVVIDKDFSHPQMPKELRDVKLAIL 253 (622)
Q Consensus 176 ~sk~~~~~~~~la~lv~~Av~~v~~~--~~~~~~~~~I~I~~~~G~~~~dS~li~Giv~~~~~~~~~~~~~~~n~ki~ll 253 (622)
+||+.++++++|++++++|+.++++. +...+|+++|+|++++|++++||++++|++|+++|.||+||++++|+||+++
T Consensus 161 ~sKi~~~~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIll~ 240 (543)
T 1a6d_B 161 NSKSASVAKDKLAEISYEAVKSVAELRDGKYYVDFDNIQVVKKQGGAIDDTQLINGIIVDKEKVHPGMPDVVKDAKIALL 240 (543)
T ss_dssp TTSGGGGGHHHHHHHHHHHHHHHEEECSSSEEECGGGEEEEEEESSCGGGCEEESEEEESCCCSSTTSCSEEEEEEEEEE
T ss_pred ccccccccHHHHHHHHHHHHHHhcccccCCcccccceEEEEEecCCCccceeEEccEEEecCCCCCCCcceecCCeEEEE
Confidence 99999999999999999999999854 2235788899999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCceeEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHCCCcEEeecCcccHH
Q psy14623 254 TCPFEPPRPKTKHNLDVQSVEDYKELRKYEQEKFASMVDKVKATGATLAICQWGFDDEANHLLLQKQLPAVRWVGGPDIE 333 (622)
Q Consensus 254 ~~~l~~~~~~~~~~~~i~~~~~l~~~~~~e~~~i~~~v~~l~~~g~~lVi~~~~I~~~al~~L~~~~I~~i~~v~~~~L~ 333 (622)
+++|++++++.++++.++++++++.+.+.|++|++++++++.+.|++|||++++|++.|++||.++||.+++++++++|+
T Consensus 241 ~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~v~k~~le 320 (543)
T 1a6d_B 241 DAPLEIKKPEFDTNLRIEDPSMIQKFLAQEENMLREMVDKIKSVGANVVITQKGIDDMAQHYLSRAGIYAVRRVKKSDMD 320 (543)
T ss_dssp SSCBSCCCCSSEEEECCCSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHH
T ss_pred ecccccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEECCCcCHHHHHHHHHCCeeEeccCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCeeccCccchhhhhhcccccCcccccccccccCccccchhhhhcCCcccccccccCcccccccccEEEEEecc
Q psy14623 334 LIAIVTGGRIVPRFEELTSEKLGKAGLGNQFWYNQRSHAGHTDIELIAIVTGGRIVPRFEELTSEKLGKAGLVREISFGT 413 (622)
Q Consensus 334 ~ia~~tGa~ii~~~~~l~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lG~~~~v~~~~~g~ 413 (622)
|||++|||++++++++ ++++.+|+|+.|++..+|
T Consensus 321 ~ia~~tGa~iis~l~~---------------------------------------------l~~~~LG~a~~v~~~~ig- 354 (543)
T 1a6d_B 321 KLAKATGASIVSTIDE---------------------------------------------ISSSDLGTAERVEQVKVG- 354 (543)
T ss_dssp HHHHHHTCCEESCGGG---------------------------------------------CCGGGCEEEEEEEEEEET-
T ss_pred HHHHHhCCceeccccc---------------------------------------------CCHHHCCCceEEEEEEec-
Confidence 9999999999998877 778899999999999998
Q ss_pred ccceEEEEeccCCCceEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHhcCccccCCChhhhhHHHHHHHhhccccchhHH
Q psy14623 414 TKDHMLVIEECENSKAVTIFIRGGNKMIIEEAKRSIHDALCVVRNLVTENRVVYGGGAAEVSCAIAVAAEADKISSIEQY 493 (622)
Q Consensus 414 ~~~~~~~~~~~~~~~~~TIll~G~t~~~l~E~~~~l~dal~~~~~~l~~g~vvpGGGa~E~~ls~~L~~~~~~~~~~~~~ 493 (622)
+++|+||++|++++.|||+|||+|+.+++|.||+++|||+++|+++++|++|||||++|++|+.+|++++.++++++|+
T Consensus 355 -~~~~~~~~g~~~~~~~TI~lrG~t~~~l~E~er~l~DAl~~~r~a~~~~~ivpGGGa~e~~~s~~L~~~~~~~~g~~q~ 433 (543)
T 1a6d_B 355 -EDYMTFVTGCKNPKAVSILVRGETEHVVDEMERSITDSLHVVASALEDGAYAAGGGATAAEIAFRLRSYAQKIGGRQQL 433 (543)
T ss_dssp -TEEEEEEEEESSSSCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHHTCSSHHH
T ss_pred -CceEEEEecCCCCceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHHCCCccCCccHHHHHHHHHHHHHhhhcCChHHH
Confidence 7899999999999999999999999999999999999999999999999999999999999999999999888999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHhhhcCCCceEEEccCCcccccccCCcccchHHHHHHHHHHHHHHHH
Q psy14623 494 AFRAFADALESIPLALAENSGLSPIETLTEVKSRQVKEVNPALGIDCMLNGTNDMKQQNVIEALRSKKQQILLSTQLVKM 573 (622)
Q Consensus 494 ~~~~~a~AL~~ip~~L~~NaG~d~~~il~~L~~~~~~~~~~~~Gid~~~g~~~d~~~~gI~dp~~vk~~~L~~A~e~a~~ 573 (622)
++++|++||+.||++|++|||+|+.+++++|++.|.. +..++|||+.+|++.||.+.|||||+.||+++|+.|+|+|++
T Consensus 434 ~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~-~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~ 512 (543)
T 1a6d_B 434 AIEKFADAIEEIPRALAENAGLDPIDILLKLRAEHAK-GNKTYGINVFTGEIEDMVKNGVIEPIRVGKQAIESATEAAIM 512 (543)
T ss_dssp HHHHHHHHHTHHHHHHHHHHTCCHHHHHHHHHHHHHT-TCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHhC-CCCCeeEeCCCCcccchhhcCceecHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999864 456899999999999999999999999999999999999999
Q ss_pred HHhhhheecCCC
Q psy14623 574 ILKIDDIRSPND 585 (622)
Q Consensus 574 lL~iD~iI~~~~ 585 (622)
|||+|++|...+
T Consensus 513 iL~id~iI~~~~ 524 (543)
T 1a6d_B 513 ILRIDDVIATKS 524 (543)
T ss_dssp HHHEEEEEC---
T ss_pred HHHHHHHHhcCc
Confidence 999999999765
No 7
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1e-109 Score=924.28 Aligned_cols=513 Identities=31% Similarity=0.469 Sum_probs=487.6
Q ss_pred hhcccHHHHHHHHHHHHHHHHHhccccCccccceeeecCCCCeEEeccHHHHhhhcccCChhHHHHHHHHhhccccccCc
Q psy14623 28 KRIIGNDAIKSHIVAAKNIANTLKTSLGPKGLDKMMVSSDGDVTVTNDGATILKLMDVDHEIAKLMVQLSQSQDDEIGDG 107 (622)
Q Consensus 28 ~~~~g~~~~~~~~~a~~~la~~v~tslGP~G~~kmi~~~~g~~~ITnDG~tIl~~l~~~hP~akll~~~a~~~~~~~GDG 107 (622)
++.+|.+++..|+.||+.|+++|||||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++||+++|||
T Consensus 4 ~~~~g~~a~~~ni~a~~~la~~v~ttlGP~G~~kml~~~~g~~~iTnDG~tIlk~i~v~hP~akll~~~a~~qd~e~GDG 83 (529)
T 3iyg_A 4 DRSTGEAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELADLQDKEVGDG 83 (529)
T ss_pred chhchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCChHHHHHHHHHHHhhhhhCCC
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhc-cccccCCCCCChHHHHHHHHHhhcCccchhhHHH
Q psy14623 108 TTGVVVLAGALLEQAEHLLDKGIHPIRIADGFELAAQCAVKHLET-IADSFPVNPDNLEPLIKTAMTTLGSKIINKCHRQ 186 (622)
Q Consensus 108 Ttt~vlLa~~Ll~~a~~li~~gi~p~~Ii~g~~~a~~~~l~~L~~-~s~~i~~~~~~~~~L~~va~tsl~sk~~~~~~~~ 186 (622)
|||+++||++||+++.+++++|+||+.|++||++|++.++++|++ ++.+++ ..+++.|.++|+|+++||+.++++++
T Consensus 84 TTtvvvLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~--~~~~e~l~~va~tsl~sK~~~~~~~~ 161 (529)
T 3iyg_A 84 TTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYISENLIINTD--ELGRDCLINAAKTSMSSKVIGINGDF 161 (529)
T ss_pred hhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCC--CCCHHHHHHHHHHHhccCcccccHHH
Confidence 999999999999999999999999999999999999999999998 866543 34688999999999999999999999
Q ss_pred HHHHHHHHHHHhcc---cccCCCCcccEEEEEccCCCccceeEEeeEEEeecCCCCCCCcccccceEEEecCCCCCCCCC
Q psy14623 187 MAEIAVNAVMAVAD---LEKRDVNFELIKVEGKVGGKLEDTMLVKGVVIDKDFSHPQMPKELRDVKLAILTCPFEPPRPK 263 (622)
Q Consensus 187 la~lv~~Av~~v~~---~~~~~~~~~~I~I~~~~G~~~~dS~li~Giv~~~~~~~~~~~~~~~n~ki~ll~~~l~~~~~~ 263 (622)
|+++++||+.++++ .+...+|+++|+|+++.|+++.||++++|++|+++|.||+||++++|+||++++++|++++++
T Consensus 162 i~~livdAv~~V~~~~~~g~~~~dv~~I~I~k~~G~~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIlll~~~le~~k~e 241 (529)
T 3iyg_A 162 FANLVVDAVLAIKYTDIRGQPRYPVNSINVLKAHGRSQMESMLINGYALNCVVGSQGMPKRIVNAKIACLDFSLQKTKMK 241 (529)
T ss_pred HHHHHHHHHHHHhhhccCCCcccccceEEEEEecCCCccceEEEeeeEEecCcccccCCcccCCceEEEecCCccccccc
Confidence 99999999999973 223457788899999999999999999999999999999999999999999999999999999
Q ss_pred CCceeEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHCCCcEEeecCcccHHHHHHHhCCee
Q psy14623 264 TKHNLDVQSVEDYKELRKYEQEKFASMVDKVKATGATLAICQWGFDDEANHLLLQKQLPAVRWVGGPDIELIAIVTGGRI 343 (622)
Q Consensus 264 ~~~~~~i~~~~~l~~~~~~e~~~i~~~v~~l~~~g~~lVi~~~~I~~~al~~L~~~~I~~i~~v~~~~L~~ia~~tGa~i 343 (622)
.++++.++++++++.+.+.|+++++++++++.+.|++|||++++|++.+++||.++||++++++++++|+|||++|||++
T Consensus 242 ~~~~v~i~~~~~~~~i~~~E~~~l~~~v~kI~~~g~nvvi~~~~I~d~al~~L~~~gI~av~~v~k~~leria~~tGa~i 321 (529)
T 3iyg_A 242 LGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAGAMAVRRVLKRDLKRIAKASGATV 321 (529)
T ss_pred CCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCceeccCCHHHHHHHHHHhCCee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCccchhhhhhcccccCcccccccccccCccccchhhhhcCCcccccccccCcccccccccEEEEEeccccceEEEEec
Q psy14623 344 VPRFEELTSEKLGKAGLGNQFWYNQRSHAGHTDIELIAIVTGGRIVPRFEELTSEKLGKAGLVREISFGTTKDHMLVIEE 423 (622)
Q Consensus 344 i~~~~~l~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lG~~~~v~~~~~g~~~~~~~~~~~ 423 (622)
++++++++.+ +++++.++|+|+.|+++.+| +++|+||++
T Consensus 322 v~~~~~l~~~---------------------------------------e~~~~~~LG~a~~v~~~~ig--~~~~~~~~g 360 (529)
T 3iyg_A 322 LSTLANLEGE---------------------------------------ETFEASMLGQAEEVVQERIC--DDELILIKN 360 (529)
T ss_pred ecchhcccch---------------------------------------hccChhhCccceEEEEEEeC--CceEEEEEc
Confidence 9998874321 12678899999999999998 789999999
Q ss_pred cCCCceEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHhcCccccCCChhhhhHHHHHHHhhccccchhHHHHHHHHHHHH
Q psy14623 424 CENSKAVTIFIRGGNKMIIEEAKRSIHDALCVVRNLVTENRVVYGGGAAEVSCAIAVAAEADKISSIEQYAFRAFADALE 503 (622)
Q Consensus 424 ~~~~~~~TIll~G~t~~~l~E~~~~l~dal~~~~~~l~~g~vvpGGGa~E~~ls~~L~~~~~~~~~~~~~~~~~~a~AL~ 503 (622)
|++++.|||+|||+|+.+++|.||++||||+++|+++++|++||||||+|++|+.+|++++.++++++|+++++||+|||
T Consensus 361 ~~~~~~~TI~lrG~t~~~l~E~er~l~Dal~v~r~~v~~~~iVpGGGa~E~~ls~~L~~~~~~~~g~eq~~i~~fa~ALe 440 (529)
T 3iyg_A 361 TKARTSASVILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLL 440 (529)
T ss_pred CCCCceEEEEECCchHHHHHHHHHHHHHHHHHHHHHhhCCeEEeCCcHHHHHHHHHHHHHhhhcCChHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCChHHHHHHHHHHhhhcC-------CCceEEEccCCcccccccCCcccchHHHHHHHHHHHHHHHHHHh
Q psy14623 504 SIPLALAENSGLSPIETLTEVKSRQVKEV-------NPALGIDCMLNGTNDMKQQNVIEALRSKKQQILLSTQLVKMILK 576 (622)
Q Consensus 504 ~ip~~L~~NaG~d~~~il~~L~~~~~~~~-------~~~~Gid~~~g~~~d~~~~gI~dp~~vk~~~L~~A~e~a~~lL~ 576 (622)
.||++|++|||+|+.+++++|++.|..+. ..++|||+.+|++.||++.|||||+.||+++|+.|+|+|++|||
T Consensus 441 ~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~~~~G~d~~~g~~~d~~~~gV~dp~~vk~~al~~A~e~a~~iL~ 520 (529)
T 3iyg_A 441 VIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLVNGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILR 520 (529)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHhccccccccccCceeeeeCCCCCccChhhccCEecHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999987543 15799999999999999999999999999999999999999999
Q ss_pred hhheecC
Q psy14623 577 IDDIRSP 583 (622)
Q Consensus 577 iD~iI~~ 583 (622)
||++|..
T Consensus 521 iD~ii~~ 527 (529)
T 3iyg_A 521 IDDLIKL 527 (529)
T ss_pred HHhhhcC
Confidence 9999976
No 8
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=100.00 E-value=4.3e-110 Score=929.41 Aligned_cols=517 Identities=39% Similarity=0.640 Sum_probs=484.3
Q ss_pred ceeeeccchhhhhcccHHHHHHHHHHHHHHHHHhccccCccccceeeecCCCCeEEeccHHHHhhhcccCChhHHHHHHH
Q psy14623 17 PFIILRNQQEQKRIIGNDAIKSHIVAAKNIANTLKTSLGPKGLDKMMVSSDGDVTVTNDGATILKLMDVDHEIAKLMVQL 96 (622)
Q Consensus 17 ~~~~~~~~~~~~~~~g~~~~~~~~~a~~~la~~v~tslGP~G~~kmi~~~~g~~~ITnDG~tIl~~l~~~hP~akll~~~ 96 (622)
|.++++++ .++.+|.+++..|+.||+.|+++|||||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++
T Consensus 7 ~~~~l~~~--~~~~~g~~a~~~ni~a~~~la~~vkttLGP~G~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~ 84 (545)
T 1a6d_A 7 PILVLKEG--TQREQGKNAQRNNIEAAKAIADAVRTTLGPKGMDKMLVDSIGDIIISNDGATILKEMDVEHPTAKMIVEV 84 (545)
T ss_dssp ------------CEEHHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECSSSCEEEECCHHHHHHHSCCCSHHHHHHHGG
T ss_pred cccccCCc--chhhchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCcHHHHHHhhhccchHHHHHHHH
Confidence 66677777 4678999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhccccccCchhhHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhccccccCCCCCChHHHHHHHHHhhc
Q psy14623 97 SQSQDDEIGDGTTGVVVLAGALLEQAEHLLDKGIHPIRIADGFELAAQCAVKHLETIADSFPVNPDNLEPLIKTAMTTLG 176 (622)
Q Consensus 97 a~~~~~~~GDGTtt~vlLa~~Ll~~a~~li~~gi~p~~Ii~g~~~a~~~~l~~L~~~s~~i~~~~~~~~~L~~va~tsl~ 176 (622)
|++||+++||||||+++||++||+++.+++++|+||+.|++||++|++.++++|++++++ + .+++.|.++|+|+++
T Consensus 85 a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~-~---~~~~~l~~va~tsl~ 160 (545)
T 1a6d_A 85 SKAQDTAVGDGTTTAVVLSGELLKQAETLLDQGVHPTVISNGYRLAVNEARKIIDEIAEK-S---TDDATLRKIALTALS 160 (545)
T ss_dssp GGCTTTCSTTHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCEE-C---CCHHHHHHHHHHHTT
T ss_pred HHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCC-C---CCHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999999766 3 478999999999999
Q ss_pred CccchhhHHHHHHHHHHHHHHhcccc--cCCCCcccEEEEEccCCCccceeEEeeEEEeecCCCCCCCcccccceEEEec
Q psy14623 177 SKIINKCHRQMAEIAVNAVMAVADLE--KRDVNFELIKVEGKVGGKLEDTMLVKGVVIDKDFSHPQMPKELRDVKLAILT 254 (622)
Q Consensus 177 sk~~~~~~~~la~lv~~Av~~v~~~~--~~~~~~~~I~I~~~~G~~~~dS~li~Giv~~~~~~~~~~~~~~~n~ki~ll~ 254 (622)
||+.++++++|+++++||+.++++.. ...+|+++|+|++++|++++||++++|++|+++|.||+||++++|+||++++
T Consensus 161 sKi~~~~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIll~~ 240 (545)
T 1a6d_A 161 GKNTGLSNDFLADLVVKAVNAVAEVRDGKTIVDTANIKVDKKNGGSVNDTQFISGIVIDKEKVHSKMPDVVKNAKIALID 240 (545)
T ss_dssp TSSCCSTHHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEECCCSCSTTCEEESEEEESCCCSCTTSCSEEEEEEEEEEC
T ss_pred cccccccHHHHHHHHHHHHHHHhcccCCCcccccceEEEEEecCCCceeeEEEeeEEEeccCCCCCCcceecCCEEEEEe
Confidence 99999999999999999999997542 2357888999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCceeEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHCCCcEEeecCcccHHH
Q psy14623 255 CPFEPPRPKTKHNLDVQSVEDYKELRKYEQEKFASMVDKVKATGATLAICQWGFDDEANHLLLQKQLPAVRWVGGPDIEL 334 (622)
Q Consensus 255 ~~l~~~~~~~~~~~~i~~~~~l~~~~~~e~~~i~~~v~~l~~~g~~lVi~~~~I~~~al~~L~~~~I~~i~~v~~~~L~~ 334 (622)
++|++++++.++++.++++++++.+.++|+++++++++++.+.|++|||++++|++.|++||.++||.+++++++++|+|
T Consensus 241 ~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~~~k~~le~ 320 (545)
T 1a6d_A 241 SALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQKGIDDVAQHYLAKEGIYAVRRVKKSDMEK 320 (545)
T ss_dssp SCBSCCCCSSCCEEEECSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHHTCEEECSCCHHHHHH
T ss_pred cCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHCCeeEeccCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCeeccCccchhhhhhcccccCcccccccccccCccccchhhhhcCCcccccccccCcccccccccEEEEEeccc
Q psy14623 335 IAIVTGGRIVPRFEELTSEKLGKAGLGNQFWYNQRSHAGHTDIELIAIVTGGRIVPRFEELTSEKLGKAGLVREISFGTT 414 (622)
Q Consensus 335 ia~~tGa~ii~~~~~l~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lG~~~~v~~~~~g~~ 414 (622)
||++|||++++++++ ++++.+|+|+.|++..+|
T Consensus 321 ia~~tGa~iis~l~~---------------------------------------------~~~~~LG~a~~v~~~~ig-- 353 (545)
T 1a6d_A 321 LAKATGAKIVTDLDD---------------------------------------------LTPSVLGEAETVEERKIG-- 353 (545)
T ss_dssp HHHHHCCCEESSGGG---------------------------------------------CCGGGCEEEEEEEEEEET--
T ss_pred HHHHhCCeeeccccc---------------------------------------------CCHHHCCCceEEEEEEec--
Confidence 999999999998877 778889999999999998
Q ss_pred cceEEEEeccCCCceEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHhcCccccCCChhhhhHHHHHHHhhccccchhHHH
Q psy14623 415 KDHMLVIEECENSKAVTIFIRGGNKMIIEEAKRSIHDALCVVRNLVTENRVVYGGGAAEVSCAIAVAAEADKISSIEQYA 494 (622)
Q Consensus 415 ~~~~~~~~~~~~~~~~TIll~G~t~~~l~E~~~~l~dal~~~~~~l~~g~vvpGGGa~E~~ls~~L~~~~~~~~~~~~~~ 494 (622)
+++|+||++|.+++.|||+|||+|+.+++|.||+++|||+++|+++++|++|||||++|++|+.+|++++.++++++|++
T Consensus 354 ~~~~~~~~g~~~~~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~a~~~g~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~ 433 (545)
T 1a6d_A 354 DDRMTFVMGCKNPKAVSILIRGGTDHVVSEVERALNDAIRVVAITKEDGKFLWGGGAVEAELAMRLAKYANSVGGREQLA 433 (545)
T ss_dssp TEEEEEEEEESCSSCEEEEECCSSSTTHHHHHHHHHHHHHHHHHHHHHCEEEETTTHHHHHHHHHHHHHHHTSCHHHHHH
T ss_pred CceEEEEecCCCCceEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEEeCcCHHHHHHHHHHHHHhhccCccHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999998889999999
Q ss_pred HHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHhhhcCCCceEEEccCCcccccccCCcccchHHHHHHHHHHHHHHHHH
Q psy14623 495 FRAFADALESIPLALAENSGLSPIETLTEVKSRQVKEVNPALGIDCMLNGTNDMKQQNVIEALRSKKQQILLSTQLVKMI 574 (622)
Q Consensus 495 ~~~~a~AL~~ip~~L~~NaG~d~~~il~~L~~~~~~~~~~~~Gid~~~g~~~d~~~~gI~dp~~vk~~~L~~A~e~a~~l 574 (622)
+++|++||+.||++|++|||+|+.+++++|++.|.. ++.++|||+.+|++.||++.|||||+.||+++|+.|+|+|++|
T Consensus 434 i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~-~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~i 512 (545)
T 1a6d_A 434 IEAFAKALEIIPRTLAENAGIDPINTLIKLKADDEK-GRISVGVDLDNNGVGDMKAKGVVDPLRVKTHALESAVEVATMI 512 (545)
T ss_dssp HHHHHHHHTHHHHHHHHHHTSCHHHHHHHHHHHHHT-TCTTEEEETTTTEEEEHHHHTCEEEHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhc-CCCCcceecccCccccchhcCccccHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999998864 4568999999999999999999999999999999999999999
Q ss_pred HhhhheecCCCCC
Q psy14623 575 LKIDDIRSPNDGI 587 (622)
Q Consensus 575 L~iD~iI~~~~~~ 587 (622)
||+|++|...+..
T Consensus 513 L~id~iI~~~~~~ 525 (545)
T 1a6d_A 513 LRIDDVIASKKST 525 (545)
T ss_dssp HTCCEEC------
T ss_pred HHHHHHHhcccCC
Confidence 9999999986543
No 9
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.1e-108 Score=913.26 Aligned_cols=508 Identities=32% Similarity=0.554 Sum_probs=484.4
Q ss_pred hhcccHHHHHHHHHHHHHHHHHhccccCccccceeeecCCCCeEEeccHHHHhhhcccCChhHHHHHHHHhhccccccCc
Q psy14623 28 KRIIGNDAIKSHIVAAKNIANTLKTSLGPKGLDKMMVSSDGDVTVTNDGATILKLMDVDHEIAKLMVQLSQSQDDEIGDG 107 (622)
Q Consensus 28 ~~~~g~~~~~~~~~a~~~la~~v~tslGP~G~~kmi~~~~g~~~ITnDG~tIl~~l~~~hP~akll~~~a~~~~~~~GDG 107 (622)
++..|.+++..|+.||+.|+++|||||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++||+++|||
T Consensus 3 ~~~~g~~~~~~ni~a~~~la~~vkttLGP~G~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~GDG 82 (515)
T 3iyg_G 3 KRESGRKVQSGNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVGDG 82 (515)
T ss_pred cccchHHHHHHHHHHHHHHHHHHhcCcCCCCCeEEEECCCCCeEEECCHHHHHHhcccCCHHHHHHHHHHHHhhhhhCCC
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhccccccCCCCCChHHHHHHHHHhhcCccchhhHHHH
Q psy14623 108 TTGVVVLAGALLEQAEHLLDKGIHPIRIADGFELAAQCAVKHLETIADSFPVNPDNLEPLIKTAMTTLGSKIINKCHRQM 187 (622)
Q Consensus 108 Ttt~vlLa~~Ll~~a~~li~~gi~p~~Ii~g~~~a~~~~l~~L~~~s~~i~~~~~~~~~L~~va~tsl~sk~~~~~~~~l 187 (622)
|||+|+||++||+++.+++++|+||+.|++||++|++.++++|++++.+++ ..+++.|.++|+|++++|.++.+.+++
T Consensus 83 TTtvvvLAgeLL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~--~~~~~~l~~va~tsl~sK~i~~~~~~~ 160 (515)
T 3iyg_G 83 TTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTLKKISIPVD--TSNRDTMLNIINSSITTKVISRWSSLA 160 (515)
T ss_pred hhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccC--CCCHHHHHHHHHHHhcCCchhhHHHHH
Confidence 999999999999999999999999999999999999999999999976653 346889999999999999999999999
Q ss_pred HHHHHHHHHHhcccc--cCCCCccc-EEEEEccCCCccceeEEeeEEEeecCCCCCCCcccccceEEEecCCCCCCCCCC
Q psy14623 188 AEIAVNAVMAVADLE--KRDVNFEL-IKVEGKVGGKLEDTMLVKGVVIDKDFSHPQMPKELRDVKLAILTCPFEPPRPKT 264 (622)
Q Consensus 188 a~lv~~Av~~v~~~~--~~~~~~~~-I~I~~~~G~~~~dS~li~Giv~~~~~~~~~~~~~~~n~ki~ll~~~l~~~~~~~ 264 (622)
+++++||+..+.+.. ...+|+++ |+|++++|++++||++++|++|+++|.||.||+.++||||++++++|++++++.
T Consensus 161 ~~i~vdav~~V~~~~~~~~~~dl~~~I~I~ki~Ggs~~ds~lv~G~v~dk~~~~~~m~~~ien~kIll~~~~Le~~k~e~ 240 (515)
T 3iyg_G 161 CNIALDAVKTVQFEENGRKEIDIKKYARVEKIPGGIIEDSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGES 240 (515)
T ss_pred HHHHHHHHHhcccccCCCcccchhheeEEEEecCCCcccceEEeeEEEeCCCCCCCCcceeeeeEEEEEccccccccccc
Confidence 999999999886321 22366654 999999999999999999999999999999999999999999999999999999
Q ss_pred CceeEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHCCCcEEeecCcccHHHHHHHhCCeec
Q psy14623 265 KHNLDVQSVEDYKELRKYEQEKFASMVDKVKATGATLAICQWGFDDEANHLLLQKQLPAVRWVGGPDIELIAIVTGGRIV 344 (622)
Q Consensus 265 ~~~~~i~~~~~l~~~~~~e~~~i~~~v~~l~~~g~~lVi~~~~I~~~al~~L~~~~I~~i~~v~~~~L~~ia~~tGa~ii 344 (622)
++++.+++++++..+.+.|+++++++++++.+.|++|||++++|++.+++||.++||++++++++++|+|||++|||+++
T Consensus 241 ~~~v~is~~~~l~~~l~~E~~~l~~~v~kI~~~g~~vIi~~~~I~~~al~~L~~~~I~av~~~~k~~leria~~tGa~ii 320 (515)
T 3iyg_G 241 QTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPDVVITEKGISDLAQHYLMRANITAIRRVRKTDNNRIARACGARIV 320 (515)
T ss_pred CceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECCccCHHHHHHHHHCCceeeccCCHHHHHHHHHHhCCeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCccchhhhhhcccccCcccccccccccCccccchhhhhcCCcccccccccCcccccc-cccEEEEEeccccceEEEEec
Q psy14623 345 PRFEELTSEKLGKAGLGNQFWYNQRSHAGHTDIELIAIVTGGRIVPRFEELTSEKLGK-AGLVREISFGTTKDHMLVIEE 423 (622)
Q Consensus 345 ~~~~~l~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lG~-~~~v~~~~~g~~~~~~~~~~~ 423 (622)
+++++ ++++.+|+ |+.|++..+| +++|+||+|
T Consensus 321 ~~l~~---------------------------------------------l~~~~LG~~a~~v~~~~~g--~~~~~~i~g 353 (515)
T 3iyg_G 321 SRPEE---------------------------------------------LREEDVGTGAGLLEIKKIG--DEYFTFITE 353 (515)
T ss_pred ccccc---------------------------------------------cChhhcCCcccEEEEEEEC--CceEEEEeC
Confidence 99877 77788999 9999999998 689999999
Q ss_pred cCCCceEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHhcCccccCCChhhhhHHHHHHHhhccccchhHHHHHHHHHHHH
Q psy14623 424 CENSKAVTIFIRGGNKMIIEEAKRSIHDALCVVRNLVTENRVVYGGGAAEVSCAIAVAAEADKISSIEQYAFRAFADALE 503 (622)
Q Consensus 424 ~~~~~~~TIll~G~t~~~l~E~~~~l~dal~~~~~~l~~g~vvpGGGa~E~~ls~~L~~~~~~~~~~~~~~~~~~a~AL~ 503 (622)
|++++.|||+|||+|+.+++|.||+++|||+++|++++++++|||||++|++|+.+|++++.++++++|+++++||+|||
T Consensus 354 ~~~~~~~TIllrG~t~~~l~E~er~i~Dal~~~r~~~~~~~ivpGGGa~e~~~~~~L~~~~~~~~g~eq~~i~~~a~Ale 433 (515)
T 3iyg_G 354 CKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHALTEKSKAMTGVEQWPYRAVAQALE 433 (515)
T ss_pred CCCCCeEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHhhCCcEEeCCCHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCChHHHHHHHHHHhhhcCCCceEEEccCCcccccccCCcccchHHHHHHHHHHHHHHHHHHhhhheecC
Q psy14623 504 SIPLALAENSGLSPIETLTEVKSRQVKEVNPALGIDCMLNGTNDMKQQNVIEALRSKKQQILLSTQLVKMILKIDDIRSP 583 (622)
Q Consensus 504 ~ip~~L~~NaG~d~~~il~~L~~~~~~~~~~~~Gid~~~g~~~d~~~~gI~dp~~vk~~~L~~A~e~a~~lL~iD~iI~~ 583 (622)
.||++|++|||+|+.+++++|++.|..+++.++|||+.+|++.||++.|||||+.||+++|+.|+|+|++|||+|++|..
T Consensus 434 ~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~~~gi~dp~~vk~~al~~A~e~a~~iL~iD~ii~~ 513 (515)
T 3iyg_G 434 VIPRTLIQNCGASTIRLLTSLRAKHTQENCETWGVNGETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSG 513 (515)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHhcCCCceeeeCCCCcccccHHcCCEEcHHHHHHHHHHHHHHHHHHHHHHheeec
Confidence 99999999999999999999999987644568999999999999999999999999999999999999999999999975
Q ss_pred C
Q psy14623 584 N 584 (622)
Q Consensus 584 ~ 584 (622)
.
T Consensus 514 ~ 514 (515)
T 3iyg_G 514 H 514 (515)
T ss_pred C
Confidence 3
No 10
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.9e-108 Score=910.48 Aligned_cols=507 Identities=30% Similarity=0.486 Sum_probs=484.0
Q ss_pred hhhcccHHHHHHHHHHHHHHHHHhccccCccccceeeecCCCCeEEeccHHHHhhhcccCChhHHHHHHHHhhccccccC
Q psy14623 27 QKRIIGNDAIKSHIVAAKNIANTLKTSLGPKGLDKMMVSSDGDVTVTNDGATILKLMDVDHEIAKLMVQLSQSQDDEIGD 106 (622)
Q Consensus 27 ~~~~~g~~~~~~~~~a~~~la~~v~tslGP~G~~kmi~~~~g~~~ITnDG~tIl~~l~~~hP~akll~~~a~~~~~~~GD 106 (622)
.++..|.+++..||.||+.|+++|||||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++||+++||
T Consensus 4 ~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~~~GD 83 (515)
T 3iyg_H 4 TDSSQGIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHPAAKTLVDIAKSQDAEVGD 83 (515)
T ss_pred ccccCcHHHHHHHHHHHHHHHHHHhhCcCCCCCeEEEECCCCCeEEECCHHHHHHHccCCCHHHHHHHHHHHHhhceeCc
Confidence 35678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhccccccCCCCCC--hHHHHHHHHHhhcCccchhhH
Q psy14623 107 GTTGVVVLAGALLEQAEHLLDKGIHPIRIADGFELAAQCAVKHLETIADSFPVNPDN--LEPLIKTAMTTLGSKIINKCH 184 (622)
Q Consensus 107 GTtt~vlLa~~Ll~~a~~li~~gi~p~~Ii~g~~~a~~~~l~~L~~~s~~i~~~~~~--~~~L~~va~tsl~sk~~~~~~ 184 (622)
||||+++||++||+++.+++++|+||+.|++||++|++.++++|++++++++.+..+ ++.|.++|+|+++||+++.++
T Consensus 84 GTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~~~~~L~~va~tsl~sK~~s~~~ 163 (515)
T 3iyg_H 84 GTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEIAVTVKKEDKVEQRKLLEKCAMTALSSKLISQQK 163 (515)
T ss_pred chhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccccCChHHHHHHHHHHHHHHhcCCcccccH
Confidence 999999999999999999999999999999999999999999999998776432211 678899999999999999999
Q ss_pred HHHHHHHHHHHHHhcccccCCCCcccEEEEEccCCCccceeEEeeEEEeecCCCCCC---CcccccceEEEecCCCCCCC
Q psy14623 185 RQMAEIAVNAVMAVADLEKRDVNFELIKVEGKVGGKLEDTMLVKGVVIDKDFSHPQM---PKELRDVKLAILTCPFEPPR 261 (622)
Q Consensus 185 ~~la~lv~~Av~~v~~~~~~~~~~~~I~I~~~~G~~~~dS~li~Giv~~~~~~~~~~---~~~~~n~ki~ll~~~l~~~~ 261 (622)
++|++++++|+.+++ +.+|+++|+|+++.|++..||++++|++|+++|.||+| |+.++||||++++++|++++
T Consensus 164 ~~i~~livdAv~~V~----~~~d~~~I~V~k~~Gg~~~ds~lv~G~~~dk~~~~p~~~~~p~~~en~kIll~~~~Le~~k 239 (515)
T 3iyg_H 164 AFFAKMVVDAVMMLD----DLLQLKMIGIKKVQGGALEESQLVAGVAFKKTFSYAGFEMQPKKYHNPMIALLNVELELKA 239 (515)
T ss_pred HHHHHHHHHHHHHhc----ccCCcceEEEEecCCCCccceEEEeeeEEecCccCcccccCCccccccEEEEEcccccccc
Confidence 999999999999995 35778889999999999999999999999999999987 78899999999999999999
Q ss_pred CCCCceeEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHCCCcEEeecCcccHHHHHHHhCC
Q psy14623 262 PKTKHNLDVQSVEDYKELRKYEQEKFASMVDKVKATGATLAICQWGFDDEANHLLLQKQLPAVRWVGGPDIELIAIVTGG 341 (622)
Q Consensus 262 ~~~~~~~~i~~~~~l~~~~~~e~~~i~~~v~~l~~~g~~lVi~~~~I~~~al~~L~~~~I~~i~~v~~~~L~~ia~~tGa 341 (622)
++.++++.++++++++.+.+.|+++++++++++.+.|++|||++++|++.+++||.++||++++++++++|+|||++|||
T Consensus 240 ~e~~~~v~is~~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~dla~~~l~~~gI~~v~~~~k~~leria~~tGa 319 (515)
T 3iyg_H 240 EKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMMACGG 319 (515)
T ss_pred cccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEECCcccHHHHHHHHHcCCcccccccHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeccCccchhhhhhcccccCcccccccccccCccccchhhhhcCCcccccccccCcccccccccEEEEEeccccceEEEE
Q psy14623 342 RIVPRFEELTSEKLGKAGLGNQFWYNQRSHAGHTDIELIAIVTGGRIVPRFEELTSEKLGKAGLVREISFGTTKDHMLVI 421 (622)
Q Consensus 342 ~ii~~~~~l~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lG~~~~v~~~~~g~~~~~~~~~ 421 (622)
++++++++ ++++.+|+|+.|++..+| +++++||
T Consensus 320 ~ii~~l~~---------------------------------------------~~~~~LG~a~~v~~~~ig--~~~~~~i 352 (515)
T 3iyg_H 320 SIQTSVNA---------------------------------------------LSSDVLGRCQVFEETQIG--GERYNFF 352 (515)
T ss_pred EEeecccc---------------------------------------------CCHHHCCcccEEEEEEEc--CeEEEEE
Confidence 99999877 777889999999999998 7899999
Q ss_pred eccCCCceEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHhcCccccCCChhhhhHHHHHHHhhccccchhHHHHHHHHHH
Q psy14623 422 EECENSKAVTIFIRGGNKMIIEEAKRSIHDALCVVRNLVTENRVVYGGGAAEVSCAIAVAAEADKISSIEQYAFRAFADA 501 (622)
Q Consensus 422 ~~~~~~~~~TIll~G~t~~~l~E~~~~l~dal~~~~~~l~~g~vvpGGGa~E~~ls~~L~~~~~~~~~~~~~~~~~~a~A 501 (622)
++|.+++.|||+|||+|+.+++|.||+++|||+++|++++++++|||||++|++++.+|++++.++++++|+++++|++|
T Consensus 353 ~g~~~~~~~tI~lrG~t~~~l~E~kr~i~DAl~~~r~~v~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~A 432 (515)
T 3iyg_H 353 TGCPKAKTCTIILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLLIGAYAKA 432 (515)
T ss_pred ecCCCCceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHhhCCCeecCCcHHHHHHHHHHHHHHhcCChHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999889999999999999999999989999999999999999
Q ss_pred HHHHHHHHHhhcCCChHHHHHHHHHHhhhcCCCceEEEccCCcccccccCCcccchHHHHHHHHHHHHHHHHHHhhhhee
Q psy14623 502 LESIPLALAENSGLSPIETLTEVKSRQVKEVNPALGIDCMLNGTNDMKQQNVIEALRSKKQQILLSTQLVKMILKIDDIR 581 (622)
Q Consensus 502 L~~ip~~L~~NaG~d~~~il~~L~~~~~~~~~~~~Gid~~~g~~~d~~~~gI~dp~~vk~~~L~~A~e~a~~lL~iD~iI 581 (622)
|+.||++|++|||+|+.+++.+|++.|.. ++.++|||+.+|++.||++.|||||+.||+++|+.|+|+|++|||+|++|
T Consensus 433 Le~ip~~La~NaG~d~~~~v~~l~~~h~~-~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL~iD~ii 511 (515)
T 3iyg_H 433 LEIIPRQLCDNAGFDATNILNKLRARHAQ-GGMWYGVDINTEDIADNFEAFVWEPAMVRINALTAASEAACLIVSVDETI 511 (515)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHhhc-cCCCeeEeCCCCcccccHhccCEECHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999874 34679999999999999999999999999999999999999999999999
Q ss_pred cCCC
Q psy14623 582 SPND 585 (622)
Q Consensus 582 ~~~~ 585 (622)
.+.+
T Consensus 512 ~~~~ 515 (515)
T 3iyg_H 512 KNPR 515 (515)
T ss_pred cCCC
Confidence 8653
No 11
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=100.00 E-value=8.6e-108 Score=905.61 Aligned_cols=505 Identities=32% Similarity=0.493 Sum_probs=484.3
Q ss_pred hhhcccHHHHHHHHHHHHHHHHHhccccCccccceeeecCC--CCeEEeccHHHHhhhcccCChhHHHHHHHHhhccccc
Q psy14623 27 QKRIIGNDAIKSHIVAAKNIANTLKTSLGPKGLDKMMVSSD--GDVTVTNDGATILKLMDVDHEIAKLMVQLSQSQDDEI 104 (622)
Q Consensus 27 ~~~~~g~~~~~~~~~a~~~la~~v~tslGP~G~~kmi~~~~--g~~~ITnDG~tIl~~l~~~hP~akll~~~a~~~~~~~ 104 (622)
.++.+|.+++.+|+.||+.|+++|||||||+||+|||+++. |+++|||||+|||++|+++||+|+|++++|++||+++
T Consensus 3 ~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~~~G~~~iTnDG~tIlk~i~v~hp~Akll~e~a~~qd~e~ 82 (513)
T 3iyg_B 3 ADEERAETARLSSFIGAIAIGDLVKSTLGPKGMDKILLSSGRDASLMVTNDGATILKNIGVDNPAAKVLVDMSRVQDDEV 82 (513)
T ss_pred cchhhhHHHHHHHHHHHHHHHHHHHhccCCCCCeEEeecCCCCCCeEEECCHHHHHHHccccCHHHHHHHHHHHHhhhhh
Confidence 35689999999999999999999999999999999999999 9999999999999999999999999999999999999
Q ss_pred cCchhhHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhccccccCCCC-CChHHHHHHHHHhhcCccchhh
Q psy14623 105 GDGTTGVVVLAGALLEQAEHLLDKGIHPIRIADGFELAAQCAVKHLETIADSFPVNP-DNLEPLIKTAMTTLGSKIINKC 183 (622)
Q Consensus 105 GDGTtt~vlLa~~Ll~~a~~li~~gi~p~~Ii~g~~~a~~~~l~~L~~~s~~i~~~~-~~~~~L~~va~tsl~sk~~~~~ 183 (622)
||||||+++||++||+++.+++++|+||+.|++||++|++.++++|+++++++..+. .+++.|.++|+|++++|+.+++
T Consensus 83 GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~l~~va~tslssK~~~~~ 162 (513)
T 3iyg_B 83 GDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAARQALLNSAVDHGSDEVKFRQDLMNIAGTTLSSKLLTHH 162 (513)
T ss_pred CCChhhhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCcccccccCHHHHHHHHHhhhcccccccc
Confidence 999999999999999999999999999999999999999999999999987765332 3688999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcccccCCCCcccEEEEEccCCCccceeEEeeEEEeecCCCCCCCcccccceEEEecCCCCCCCCC
Q psy14623 184 HRQMAEIAVNAVMAVADLEKRDVNFELIKVEGKVGGKLEDTMLVKGVVIDKDFSHPQMPKELRDVKLAILTCPFEPPRPK 263 (622)
Q Consensus 184 ~~~la~lv~~Av~~v~~~~~~~~~~~~I~I~~~~G~~~~dS~li~Giv~~~~~~~~~~~~~~~n~ki~ll~~~l~~~~~~ 263 (622)
+++|++++++|+.++++ .+|+++|+|+++.|++.+||++++|++|+++|.++ ||+.++|+||++++++|++++++
T Consensus 163 ~~~i~~livdAv~~V~~----~~d~~~I~V~ki~gg~~~ds~lv~G~v~dk~~~~~-m~~~~en~kIll~~~~Le~~k~e 237 (513)
T 3iyg_B 163 KDHFTKLAVEAVLRLKG----SGNLEAIHVIKKLGGSLADSYLDEGFLLDKKIGVN-QPKRIENAKILIANTGMDTDKIK 237 (513)
T ss_pred hHHHHHHHHHHHHHhcc----cCCcCeEEEEEeCCCCccceeEEeeEEEeccccCC-CceeecCceEEEEcCCccccccc
Confidence 99999999999999973 37788899999999999999999999999999988 99999999999999999999999
Q ss_pred -CCceeEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHCCCcEEeecCcccHHHHHHHhCCe
Q psy14623 264 -TKHNLDVQSVEDYKELRKYEQEKFASMVDKVKATGATLAICQWGFDDEANHLLLQKQLPAVRWVGGPDIELIAIVTGGR 342 (622)
Q Consensus 264 -~~~~~~i~~~~~l~~~~~~e~~~i~~~v~~l~~~g~~lVi~~~~I~~~al~~L~~~~I~~i~~v~~~~L~~ia~~tGa~ 342 (622)
.++++.+++++++..+.+.|++|++++++++.+.|++|||++++|++.+++||.++||.+++++++.+|+|||++|||+
T Consensus 238 ~~~~~v~iss~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~al~~L~~~~I~av~~~~~~~le~ia~~tGa~ 317 (513)
T 3iyg_B 238 IFGSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCFINRQLIYNYPEQLFGAAGVMAIEHADFVGVERLALVTGGE 317 (513)
T ss_pred ccCCceEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCCccHHHHHHHHHcCceEEecCCHHHHHHHHHHhCCE
Confidence 8899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccCccchhhhhhcccccCcccccccccccCccccchhhhhcCCcccccccccCcccccccccEEEEEeccccceEEEEe
Q psy14623 343 IVPRFEELTSEKLGKAGLGNQFWYNQRSHAGHTDIELIAIVTGGRIVPRFEELTSEKLGKAGLVREISFGTTKDHMLVIE 422 (622)
Q Consensus 343 ii~~~~~l~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lG~~~~v~~~~~g~~~~~~~~~~ 422 (622)
+++++++ ++++++|+|+.|+++.+| ++++++|+
T Consensus 318 ii~~l~~---------------------------------------------l~~~~LG~a~~v~~~~ig--~~~~~~~~ 350 (513)
T 3iyg_B 318 IASTFDH---------------------------------------------PELVKLGSCKLIEEVMIG--EDKLIHFS 350 (513)
T ss_pred Eeccccc---------------------------------------------CCHhHCCcccEEEEEEEC--CeEEEEEe
Confidence 9998877 777899999999999998 78999999
Q ss_pred ccCCCceEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHhcCccccCCChhhhhHHHHHHHhhccccchhHHHHHHHHHHH
Q psy14623 423 ECENSKAVTIFIRGGNKMIIEEAKRSIHDALCVVRNLVTENRVVYGGGAAEVSCAIAVAAEADKISSIEQYAFRAFADAL 502 (622)
Q Consensus 423 ~~~~~~~~TIll~G~t~~~l~E~~~~l~dal~~~~~~l~~g~vvpGGGa~E~~ls~~L~~~~~~~~~~~~~~~~~~a~AL 502 (622)
+|++++.|||+|||+|+.+++|.||+++|||+++|++++++++|||||++|++|+.+|++++.++++++|+++++|++||
T Consensus 351 g~~~~~~~tI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~AL 430 (513)
T 3iyg_B 351 GVALGEACTIVLRGATQQILDEAERSLHDALCVLAQTVKDSRTVYGGGCSEMLMAHAVTQLASRTPGKEAVAMESYAKAL 430 (513)
T ss_pred cCCCCceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhCCcEEeCCcHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999998899999999999999999999889999999999999999
Q ss_pred HHHHHHHHhhcCCChHHHHHHHHHHhhhcCCCceEEEccCCcccccccCCcccchHHHHHHHHHHHHHHHHHHhhhheec
Q psy14623 503 ESIPLALAENSGLSPIETLTEVKSRQVKEVNPALGIDCMLNGTNDMKQQNVIEALRSKKQQILLSTQLVKMILKIDDIRS 582 (622)
Q Consensus 503 ~~ip~~L~~NaG~d~~~il~~L~~~~~~~~~~~~Gid~~~g~~~d~~~~gI~dp~~vk~~~L~~A~e~a~~lL~iD~iI~ 582 (622)
+.||++|++|||+|+.+++++|++.|.. ++.++|||+.+|++.||++.|||||+.||+++|+.|+|+|++|||+|++|.
T Consensus 431 e~ip~~La~NaG~d~~~~v~~l~~~h~~-~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~id~ii~ 509 (513)
T 3iyg_B 431 RMLPTIIADNAGYDSADLVAQLRAAHSE-GKTTAGLDMKEGTIGDMSVLGITESFQVKRQVLLSAAEAAEVILRVDNIIK 509 (513)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHhc-CCCceeecCCCCCccchHhccCEecHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999975 456899999999999999999999999999999999999999999999998
Q ss_pred CC
Q psy14623 583 PN 584 (622)
Q Consensus 583 ~~ 584 (622)
..
T Consensus 510 ~~ 511 (513)
T 3iyg_B 510 AA 511 (513)
T ss_pred cC
Confidence 64
No 12
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=100.00 E-value=2.6e-108 Score=916.78 Aligned_cols=517 Identities=31% Similarity=0.463 Sum_probs=487.7
Q ss_pred hhhcccHHHHHHHHHHHHHHHHHhccccCccccceeeecCCCCeEEeccHHHHhhhcccCChhHHHHHHHHhhccccccC
Q psy14623 27 QKRIIGNDAIKSHIVAAKNIANTLKTSLGPKGLDKMMVSSDGDVTVTNDGATILKLMDVDHEIAKLMVQLSQSQDDEIGD 106 (622)
Q Consensus 27 ~~~~~g~~~~~~~~~a~~~la~~v~tslGP~G~~kmi~~~~g~~~ITnDG~tIl~~l~~~hP~akll~~~a~~~~~~~GD 106 (622)
+++.+|.+++..|+.||+.|+++|||||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++||+++||
T Consensus 17 ~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~GD 96 (559)
T 3p9d_A 17 GEKISGDDIRNQNVLATMAVANVVKSSLGPVGLDKMLVDDIGDFTVTNDGATILSLLDVQHPAGKILVELAQQQDREIGD 96 (559)
T ss_dssp CEEEETHHHHHHHHHHHHHHHHHTTTTSSTTCCEEEECCSSSCCCEECCHHHHHHHHCCCSHHHHHHHHHHHHHHHHTSS
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHhccCCCCCeeEeEcCCCCEEEECCHHHHHHHhcCCCHHHHHHHHHHHHHHHHcCC
Confidence 57789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhc-cccccCCCCCChHHHHHHHHHhhcCccchhhHH
Q psy14623 107 GTTGVVVLAGALLEQAEHLLDKGIHPIRIADGFELAAQCAVKHLET-IADSFPVNPDNLEPLIKTAMTTLGSKIINKCHR 185 (622)
Q Consensus 107 GTtt~vlLa~~Ll~~a~~li~~gi~p~~Ii~g~~~a~~~~l~~L~~-~s~~i~~~~~~~~~L~~va~tsl~sk~~~~~~~ 185 (622)
||||++|||++||+++.+++++|+||+.|++||++|++.++++|++ ++.+++. .+++.|.++|+|+++||+++++++
T Consensus 97 GTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~v~~--~~~e~L~~vA~tsl~sK~~~~~~~ 174 (559)
T 3p9d_A 97 GTTSVVIIASELLKRANELVKNKIHPTTIITGFRVALREAIRFINEVLSTSVDT--LGKETLINIAKTSMSSKIIGADSD 174 (559)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHTGGGSCC----CTTHHHHHHHTTSSSGGGTTHH
T ss_pred CcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCC--CCHHHHHHHHHHHhccCcccchhH
Confidence 9999999999999999999999999999999999999999999999 8776643 357789999999999999999999
Q ss_pred HHHHHHHHHHHHhcc-c-c-cCCCCcccEEEEEccCCCccceeEEeeEEEeecCCCCCCCcccc--cceEEEecCCCCCC
Q psy14623 186 QMAEIAVNAVMAVAD-L-E-KRDVNFELIKVEGKVGGKLEDTMLVKGVVIDKDFSHPQMPKELR--DVKLAILTCPFEPP 260 (622)
Q Consensus 186 ~la~lv~~Av~~v~~-~-~-~~~~~~~~I~I~~~~G~~~~dS~li~Giv~~~~~~~~~~~~~~~--n~ki~ll~~~l~~~ 260 (622)
+|++|+++|+.++++ . . ...+|+++|+|++++|++++||++++|++|+++|.||+||+.++ |+||++++++|++.
T Consensus 175 ~i~~livdAv~~V~~~~~~~~~~i~l~~I~I~k~~Ggs~~ds~lv~G~v~dk~~~~~~m~~~ie~~n~kIll~~~~Le~~ 254 (559)
T 3p9d_A 175 FFSNMVVDALLAVKTQNSKGEIKYPVKAVNVLKAHGKSATESLLVPGYALNCTVASQAMPKRIAGGNVKIACLDLNLQKA 254 (559)
T ss_dssp HHHHHHHHHHHHHCCEESSSCEECCTTCCCEEEEESSCSSCCBCCSEECCCCCCSSTTSCSEECSSSBCEEEETTCCSCC
T ss_pred HHHHHHHHHHHHhcccccCCCCccchhHeEEEEecCCCccceeEeccEEEeecccCCCcceeeccCCceEEEEecccccc
Confidence 999999999999973 1 1 23578889999999999999999999999999999999999999 99999999999999
Q ss_pred CCCCCceeEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHCCCcEEeecCcccHHHHHHHhC
Q psy14623 261 RPKTKHNLDVQSVEDYKELRKYEQEKFASMVDKVKATGATLAICQWGFDDEANHLLLQKQLPAVRWVGGPDIELIAIVTG 340 (622)
Q Consensus 261 ~~~~~~~~~i~~~~~l~~~~~~e~~~i~~~v~~l~~~g~~lVi~~~~I~~~al~~L~~~~I~~i~~v~~~~L~~ia~~tG 340 (622)
+++.++++.++++++++.+.++|+++++++++++.+.|++|||++++|++.+++||.++||++++++++.+|+|||++||
T Consensus 255 k~e~~~~v~is~~~~l~~i~~~E~~~l~~~le~I~~~g~~lvI~~~~I~~~al~~L~~~~I~av~~~~k~~le~ia~~TG 334 (559)
T 3p9d_A 255 RMAMGVQINIDDPEQLEQIRKREAGIVLERVKKIIDAGAQVVLTTKGIDDLCLKEFVEAKIMGVRRCKKEDLRRIARATG 334 (559)
T ss_dssp CCCTTCCEEECSSSCHHHHHHHHHHHHHHHHHHHHTTCCSEEEESSCCCGGGTHHHHHTTCEEESSCCHHHHHHHHHHSS
T ss_pred ccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhCCCEEEEcCCCCHHHHHHHHHcCCceEccCCHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeeccCccchhhhhhcccccCcccccccccccCccccchhhhhcCCcccccccccCcccccccccEEEEEeccccceEEE
Q psy14623 341 GRIVPRFEELTSEKLGKAGLGNQFWYNQRSHAGHTDIELIAIVTGGRIVPRFEELTSEKLGKAGLVREISFGTTKDHMLV 420 (622)
Q Consensus 341 a~ii~~~~~l~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lG~~~~v~~~~~g~~~~~~~~ 420 (622)
|++++++..+.. .++++++++|+|+.|+++.+| +++++|
T Consensus 335 a~iis~~~~l~~---------------------------------------~e~~~~~~LG~a~~v~~~~ig--~~~~~~ 373 (559)
T 3p9d_A 335 ATLVSSMSNLEG---------------------------------------EETFESSYLGLCDEVVQAKFS--DDECIL 373 (559)
T ss_dssp CCCBCCSCCSTT---------------------------------------CCCCCTTTSCCEEEEEEEECS--SCEEEC
T ss_pred CEEEeccccccc---------------------------------------cccCCHhHCccceEEEEEEEc--CceEEE
Confidence 999998854211 012788899999999999998 789999
Q ss_pred EeccCCCceEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHhcCccccCCChhhhhHHHHHHHhhccccchhHHHHHHHHH
Q psy14623 421 IEECENSKAVTIFIRGGNKMIIEEAKRSIHDALCVVRNLVTENRVVYGGGAAEVSCAIAVAAEADKISSIEQYAFRAFAD 500 (622)
Q Consensus 421 ~~~~~~~~~~TIll~G~t~~~l~E~~~~l~dal~~~~~~l~~g~vvpGGGa~E~~ls~~L~~~~~~~~~~~~~~~~~~a~ 500 (622)
|++|+++++|||+|||+|+.+++|.||+++|||+++|+++++|++|||||++|++|+.+|++++.++++++|+++++|++
T Consensus 374 ~~g~~~~~~~tI~lrG~te~~l~E~kr~l~DAL~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ 453 (559)
T 3p9d_A 374 IKGTSKHSSSSIILRGANDYSLDEMERSLHDSLSVVKRTLESGNVVPGGGCVEAALNIYLDNFATTVGSREQLAIAEFAA 453 (559)
T ss_dssp EEEESSSCCCCEEEEESCHHHHHHHHHHHHHHHHHHHHHHTSSCEECTTTTHHHHHHHHHHHHHTTSCTTHHHHHHHHHH
T ss_pred EEcCCCCCEEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHhhcCCEEeCccHHHHHHHHHHHHHhcccChHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999998899999999999999
Q ss_pred HHHHHHHHHHhhcCCChHHHHHHHHHHhhhcCC-----------CceEEEccCCcccccccCCcccchHHHHHHHHHHHH
Q psy14623 501 ALESIPLALAENSGLSPIETLTEVKSRQVKEVN-----------PALGIDCMLNGTNDMKQQNVIEALRSKKQQILLSTQ 569 (622)
Q Consensus 501 AL~~ip~~L~~NaG~d~~~il~~L~~~~~~~~~-----------~~~Gid~~~g~~~d~~~~gI~dp~~vk~~~L~~A~e 569 (622)
||+.||++|++|||+|+.+++++|++.|.++.. .++|||+.+|++.||++.|||||+.||+++|+.|+|
T Consensus 454 ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~~~~~~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e 533 (559)
T 3p9d_A 454 ALLIIPKTLAVNAAKDSSELVAKLRSYHAASQMAKPEDVKRRSYRNYGLDLIRGKIVDEIHAGVLEPTISKVKSLKSALE 533 (559)
T ss_dssp HHHHHHHHHHHTSSSCCHHHHHHHHHHHHTTSCCC----CCCCCCCEEECTTSSSEEESTTSSCCEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHhccccccccccccccccceeEECCCCcEeehhhccCEecHHHHHHHHHHHHH
Confidence 999999999999999999999999999865322 179999999999999999999999999999999999
Q ss_pred HHHHHHhhhheecCCCC
Q psy14623 570 LVKMILKIDDIRSPNDG 586 (622)
Q Consensus 570 ~a~~lL~iD~iI~~~~~ 586 (622)
+|++|||+|++|...+.
T Consensus 534 ~a~~iL~id~ii~~~~~ 550 (559)
T 3p9d_A 534 ACVAILRIDTMITVDPE 550 (559)
T ss_dssp HHHHHHTEEEEEECCCC
T ss_pred HHHHHHhHHhhhhcCCc
Confidence 99999999999987643
No 13
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.9e-107 Score=903.80 Aligned_cols=506 Identities=36% Similarity=0.587 Sum_probs=483.4
Q ss_pred hhcccHHHHHHHHHHHHHHHHHhccccCccccceeeecCCCCeEEeccHHHHhhhcccCChhHHHHHHHHhhccccccCc
Q psy14623 28 KRIIGNDAIKSHIVAAKNIANTLKTSLGPKGLDKMMVSSDGDVTVTNDGATILKLMDVDHEIAKLMVQLSQSQDDEIGDG 107 (622)
Q Consensus 28 ~~~~g~~~~~~~~~a~~~la~~v~tslGP~G~~kmi~~~~g~~~ITnDG~tIl~~l~~~hP~akll~~~a~~~~~~~GDG 107 (622)
+..+|.+++..|+.||+.|+++|||||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++||+++|||
T Consensus 5 ~~~~g~~~~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~akll~~~a~~qd~~~GDG 84 (518)
T 3iyg_D 5 DRDKPAQIRFSNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPAARMLVELSKAQDIEAGDG 84 (518)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHhccCCCCCceeeeCCCCCeEEECCHHHHHHHcccchHHHHHHHHHHHHhhhhhCCC
Confidence 44678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhccccccCCCCCChHHHHHHHHHhhcCccchhhHHHH
Q psy14623 108 TTGVVVLAGALLEQAEHLLDKGIHPIRIADGFELAAQCAVKHLETIADSFPVNPDNLEPLIKTAMTTLGSKIINKCHRQM 187 (622)
Q Consensus 108 Ttt~vlLa~~Ll~~a~~li~~gi~p~~Ii~g~~~a~~~~l~~L~~~s~~i~~~~~~~~~L~~va~tsl~sk~~~~~~~~l 187 (622)
|||+++||++||+++.+++++|+||+.|++||++|++.++++|++++.+++ ..+++.|.++|+||++||+.++|.++|
T Consensus 85 TTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~--~~~~~~l~~vA~tsl~sK~~~~~~~~i 162 (518)
T 3iyg_D 85 TTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEILTDMSRPVE--LSDRETLLNSAATSLNSKVVSQYSSLL 162 (518)
T ss_pred ceeHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHheeeCC--CCChHHHHHHhHhhhccccchhhHHHH
Confidence 999999999999999999999999999999999999999999999977654 346889999999999999999999999
Q ss_pred HHHHHHHHHHhccc-ccCCCCcccEEEEEccCCCccceeEEeeEEEeecCCCCCCCcccccceEEEecCCCCCCCCCCCc
Q psy14623 188 AEIAVNAVMAVADL-EKRDVNFELIKVEGKVGGKLEDTMLVKGVVIDKDFSHPQMPKELRDVKLAILTCPFEPPRPKTKH 266 (622)
Q Consensus 188 a~lv~~Av~~v~~~-~~~~~~~~~I~I~~~~G~~~~dS~li~Giv~~~~~~~~~~~~~~~n~ki~ll~~~l~~~~~~~~~ 266 (622)
+++++||+.++++. ....+|+++|+|+++.|++..||++++|++|+++|.| .||+.++|+||++++++|++++++++.
T Consensus 163 ~~livdAv~~V~~~~~~~~~d~~~I~V~k~~Gg~~~ds~lv~G~~~dk~~~~-~mp~~i~n~kIlll~~~Le~~k~~~~~ 241 (518)
T 3iyg_D 163 SPMSVDAVMKVIDPATATSVDLRDIKIVKKLGGTIDDCELVEGLVLTQKVAN-SGITRVEKAKIGLIQFCLSAPKTDMDN 241 (518)
T ss_pred HHHHHHHHHHhhccccCCCcccceEEEEEcCCCChhhheEeccEEEeccccc-CCCccccCceEEEEEeeccccccccCc
Confidence 99999999999742 2345788899999999999999999999999999999 899999999999999999999999889
Q ss_pred eeEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEE-----ecCCCHHHHHHHHHCCCcEEeecCcccHHHHHHHhCC
Q psy14623 267 NLDVQSVEDYKELRKYEQEKFASMVDKVKATGATLAIC-----QWGFDDEANHLLLQKQLPAVRWVGGPDIELIAIVTGG 341 (622)
Q Consensus 267 ~~~i~~~~~l~~~~~~e~~~i~~~v~~l~~~g~~lVi~-----~~~I~~~al~~L~~~~I~~i~~v~~~~L~~ia~~tGa 341 (622)
++.++++++++.+.+.|+++++++++++.+.|++|||+ +++|++.+++||.++||.+++++++.+|+|||++|||
T Consensus 242 ~i~is~~~~~~~~~~~E~~~l~~~le~I~~~g~~lvi~~k~i~~~~I~~~Al~~L~~~~I~av~~~~~~~le~ia~~tGa 321 (518)
T 3iyg_D 242 QIVVSDYVQMDRVLREERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNKMKIMVVKDIEREDIEFICKTIGT 321 (518)
T ss_pred eEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccccccCcCHHHHHHHHHcCcEEEecCCHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999 8999999999999999999999999999999999999
Q ss_pred eeccCccchhhhhhcccccCcccccccccccCccccchhhhhcCCcccccccccCcccccccccEEEEEecccc-ceEEE
Q psy14623 342 RIVPRFEELTSEKLGKAGLGNQFWYNQRSHAGHTDIELIAIVTGGRIVPRFEELTSEKLGKAGLVREISFGTTK-DHMLV 420 (622)
Q Consensus 342 ~ii~~~~~l~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lG~~~~v~~~~~g~~~-~~~~~ 420 (622)
++++++++ ++++++|+|+.|++..+| + ++|+|
T Consensus 322 ~ii~~l~~---------------------------------------------l~~~~LG~a~~v~~~~~g--~~~~~~~ 354 (518)
T 3iyg_D 322 KPVAHVDQ---------------------------------------------FTADMLGSAELAEEVSLN--GSGKLIK 354 (518)
T ss_pred EEeccccc---------------------------------------------CCHHHCCcCcEEEEEEeC--CCceEEE
Confidence 99999877 777899999999999998 5 78999
Q ss_pred EeccCC-CceEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHhcCccccCCChhhhhHHHHHHHhhccccchhHHHHHHHH
Q psy14623 421 IEECEN-SKAVTIFIRGGNKMIIEEAKRSIHDALCVVRNLVTENRVVYGGGAAEVSCAIAVAAEADKISSIEQYAFRAFA 499 (622)
Q Consensus 421 ~~~~~~-~~~~TIll~G~t~~~l~E~~~~l~dal~~~~~~l~~g~vvpGGGa~E~~ls~~L~~~~~~~~~~~~~~~~~~a 499 (622)
|++|++ ++.|||+|||+|+.+++|.||+++|||+++|+++++|++|||||++|++|+.+|++++.+.++++|+++++|+
T Consensus 355 ~~g~~~~~~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a 434 (518)
T 3iyg_D 355 ITGCASPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESYCIRAFA 434 (518)
T ss_pred EECCCCCCceEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHhCCCEeecCcHHHHHHHHHHHHHhhcCChHHHHHHHHHH
Confidence 999988 8999999999999999999999999999999999999999999999999999999999889999999999999
Q ss_pred HHHHHHHHHHHhhcCCChHHHHHHHHHHhhhcCCCceEEEccCCcccccccCCcccchHHHHHHHHHHHHHHHHHHhhhh
Q psy14623 500 DALESIPLALAENSGLSPIETLTEVKSRQVKEVNPALGIDCMLNGTNDMKQQNVIEALRSKKQQILLSTQLVKMILKIDD 579 (622)
Q Consensus 500 ~AL~~ip~~L~~NaG~d~~~il~~L~~~~~~~~~~~~Gid~~~g~~~d~~~~gI~dp~~vk~~~L~~A~e~a~~lL~iD~ 579 (622)
+||+.||++|++|||+|+.+++.+|++.|.. ++.++|||+.+|++.||++.|||||+.||+++|+.|+|+|++|||||+
T Consensus 435 ~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~-~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ 513 (518)
T 3iyg_D 435 DAMEVIPSTLAENAGLNPISTVTELRNRHAQ-GEKTTGINVRKGGISNILEELVVQPLLVSVSALTLATETVRSILKIDD 513 (518)
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHhc-cCCceeEeCCCCcccchhhccCEEcHHHHHHHHHHHHHHHHHHHhhcc
Confidence 9999999999999999999999999999875 356799999999999999999999999999999999999999999999
Q ss_pred eecCC
Q psy14623 580 IRSPN 584 (622)
Q Consensus 580 iI~~~ 584 (622)
+|.++
T Consensus 514 ii~~~ 518 (518)
T 3iyg_D 514 VVNTR 518 (518)
T ss_pred eEecC
Confidence 99863
No 14
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=100.00 E-value=5.5e-109 Score=920.54 Aligned_cols=522 Identities=29% Similarity=0.476 Sum_probs=485.2
Q ss_pred CCceeeeccchhhhhcccHHHHHHHHHHHHHHHHHhccccCccccceeeecCCCCeEEeccHHHHhhhcccCChhHHHHH
Q psy14623 15 GRPFIILRNQQEQKRIIGNDAIKSHIVAAKNIANTLKTSLGPKGLDKMMVSSDGDVTVTNDGATILKLMDVDHEIAKLMV 94 (622)
Q Consensus 15 ~~~~~~~~~~~~~~~~~g~~~~~~~~~a~~~la~~v~tslGP~G~~kmi~~~~g~~~ITnDG~tIl~~l~~~hP~akll~ 94 (622)
+.|.++++++. ++.+|.+++..|+.||+.|+++|||||||+||+|||+++.|+++|||||+|||++|+++||+|+|++
T Consensus 7 ~~~~~~l~~~~--~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hP~Akll~ 84 (550)
T 3p9d_G 7 TPTIVVLKEGT--DASQGKGQIISNINACVAVQEALKPTLGPLGSDILIVTSNQKTTISNDGATILKLLDVVHPAAKTLV 84 (550)
T ss_dssp ---------CC--CEEESHHHHHHHHHHHHHHHTTTGGGSTTTCCCEEEECSSSCEEEECCHHHHTTTSCCCSHHHHHHH
T ss_pred CcchhhhcCCc--chhhhHHHHHHHHHHHHHHHHHHHhccCCCCCcEEEECCCCCeEEECCHHHHHHHccCCCHHHHHHH
Confidence 35778888884 6689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhccccccCchhhHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhccccccCCC-CCChHHHHHHHHH
Q psy14623 95 QLSQSQDDEIGDGTTGVVVLAGALLEQAEHLLDKGIHPIRIADGFELAAQCAVKHLETIADSFPVN-PDNLEPLIKTAMT 173 (622)
Q Consensus 95 ~~a~~~~~~~GDGTtt~vlLa~~Ll~~a~~li~~gi~p~~Ii~g~~~a~~~~l~~L~~~s~~i~~~-~~~~~~L~~va~t 173 (622)
++|++||+++||||||++|||++||+++.+++++|+||+.|++||++|++.++++|++++++++.+ ..+++.|.++|+|
T Consensus 85 e~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~L~~vA~t 164 (550)
T 3p9d_G 85 DISRAQDAEVGDGTTSVTILAGELMKEAKPFLEEGISSHLIMKGYRKAVSLAVEKINELAVDITSEKSSGRELLERCART 164 (550)
T ss_dssp HHHHHHHTTTSSCHHHHHHHHHHHHHTTSHHHHSSSCTTHHHHHHHHHHHHHHHHHHHSEECCCCC------CHHHHHHH
T ss_pred HHHHHhhhhhCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCCCCcchhHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999998776532 1227789999999
Q ss_pred hhcCccchhhHHHHHHHHHHHHHHhcccccCCCCcccEEEEEccCCCccceeEEeeEEEeecCCCCC---CCcccccceE
Q psy14623 174 TLGSKIINKCHRQMAEIAVNAVMAVADLEKRDVNFELIKVEGKVGGKLEDTMLVKGVVIDKDFSHPQ---MPKELRDVKL 250 (622)
Q Consensus 174 sl~sk~~~~~~~~la~lv~~Av~~v~~~~~~~~~~~~I~I~~~~G~~~~dS~li~Giv~~~~~~~~~---~~~~~~n~ki 250 (622)
+++||+++.++++|+++++||+.++++ +++|+++|+|++++|++++||++++|++|+++|.||| ||++++||||
T Consensus 165 sl~sK~~~~~~~~i~~livdAv~~V~~---~~~dl~~I~Vikv~Gg~~~ds~lv~G~~~dk~~~s~yf~~~~~~~en~kI 241 (550)
T 3p9d_G 165 AMSSKLIHNNADFFVKMCVDAVLSLDR---NDLDDKLIGIKKIPGGAMEESLFINGVAFKKTFSYAGFEQQPKKFNNPKI 241 (550)
T ss_dssp HHHHTTTGGGHHHHHHHHHHHHHHCCS---SSCCGGGCCCCBCCSSCGGGCCCCSSEEECCCSSCTTCSCSCSCCSSCCE
T ss_pred hccCccccccHhHHHHHHHHHHHHhCc---cccCchheeEEEecCCCccceeEEeeEEEeccccccccccCcccccCceE
Confidence 999999999999999999999999963 4688899999999999999999999999999999985 5888999999
Q ss_pred EEecCCCCCCCCCCCceeEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHCCCcEEeecCcc
Q psy14623 251 AILTCPFEPPRPKTKHNLDVQSVEDYKELRKYEQEKFASMVDKVKATGATLAICQWGFDDEANHLLLQKQLPAVRWVGGP 330 (622)
Q Consensus 251 ~ll~~~l~~~~~~~~~~~~i~~~~~l~~~~~~e~~~i~~~v~~l~~~g~~lVi~~~~I~~~al~~L~~~~I~~i~~v~~~ 330 (622)
++++++|++++++.++++.+++++++..+.+.|++++.++++++.+.|++|||++++|++.+++||.++||+++++++++
T Consensus 242 ll~~~~Le~~k~e~~~~v~is~~~~l~~il~~E~~~l~~~v~~I~~~g~~vVi~~~~I~dla~~~L~~~gI~~v~~v~k~ 321 (550)
T 3p9d_G 242 LSLNVELELKAEKDNAEVRVEHVEDYQAIVDAEWQLIFEKLRQVEETGANIVLSKLPIGDLATQFFADRNIFCAGRVSAD 321 (550)
T ss_dssp EEECSCCSCCCCSSCEEEEECSSSHHHHHHHHHHHHHHHHHHHHHTTTCSEEEESSCCCHHHHHTTGGGTCEEEECCCTT
T ss_pred EEeccccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccHHHHHHHHHcCCccccCcCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHhCCeeccCccchhhhhhcccccCcccccccccccCccccchhhhhcCCcccccccccCcccccccccEEEEE
Q psy14623 331 DIELIAIVTGGRIVPRFEELTSEKLGKAGLGNQFWYNQRSHAGHTDIELIAIVTGGRIVPRFEELTSEKLGKAGLVREIS 410 (622)
Q Consensus 331 ~L~~ia~~tGa~ii~~~~~l~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lG~~~~v~~~~ 410 (622)
+|+|||++|||++++++++ ++++.+|+|+.|++..
T Consensus 322 ~lerIa~~tGa~iis~l~~---------------------------------------------l~~~~LG~a~~v~~~~ 356 (550)
T 3p9d_G 322 DMNRVIQAVGGSIQSTTSD---------------------------------------------IKPEHLGTCALFEEMQ 356 (550)
T ss_dssp HHHHHHHHTCCCCBSSGGG---------------------------------------------CCGGGCCCCSBCCCCC
T ss_pred HHHHHHHHhCCceecchhh---------------------------------------------CCHHHcCCceEEEEEE
Confidence 9999999999999998877 7788899999999999
Q ss_pred eccccceEEEEeccCCCceEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHhcCccccCCChhhhhHHHHHHHhhccccch
Q psy14623 411 FGTTKDHMLVIEECENSKAVTIFIRGGNKMIIEEAKRSIHDALCVVRNLVTENRVVYGGGAAEVSCAIAVAAEADKISSI 490 (622)
Q Consensus 411 ~g~~~~~~~~~~~~~~~~~~TIll~G~t~~~l~E~~~~l~dal~~~~~~l~~g~vvpGGGa~E~~ls~~L~~~~~~~~~~ 490 (622)
+| ++++++|+||++++.|||+|||+|+.+++|.||+++|||+++|+++++|++|||||++|++|+.+|++++.+++++
T Consensus 357 ig--~e~~~~~~g~~~~~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~ 434 (550)
T 3p9d_G 357 IG--SERYNLFQGCPQAKTCTLLLRGGAEQVIAEVERSLHDAIMIVKRALQNKLIVAGGGATEMEVSKCLRDYSKTIAGK 434 (550)
T ss_dssp CS--SSCCEEEBCCTTCCCCCCCBCSSSHHHHHHHHHHHHHHHHHHHHHHHSCCEEETTTHHHHHHHHHHHHHHHTCCST
T ss_pred eC--CeEEEEEecCCCCceeEEEEeCCcHHHHHHHHHHHHhHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhhcCChH
Confidence 98 7899999999999999999999999999999999999999999999999999999999999999999999889999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHhhhcCCCceEEEccCCcccccccCCcccchHHHHHHHHHHHHH
Q psy14623 491 EQYAFRAFADALESIPLALAENSGLSPIETLTEVKSRQVKEVNPALGIDCMLNGTNDMKQQNVIEALRSKKQQILLSTQL 570 (622)
Q Consensus 491 ~~~~~~~~a~AL~~ip~~L~~NaG~d~~~il~~L~~~~~~~~~~~~Gid~~~g~~~d~~~~gI~dp~~vk~~~L~~A~e~ 570 (622)
+|+++++|++||+.||++|++|||+|+.+++++|++.|.. ++.++|||+.+|++.||++.|||||+.||+++|+.|+|+
T Consensus 435 eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~-~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~ 513 (550)
T 3p9d_G 435 QQMIINAFAKALEVIPRQLCENAGFDAIEILNKLRLAHSK-GEKWYGVVFETENIGDNFAKFVWEPALVKINALNSATEA 513 (550)
T ss_dssp THHHHHHHHHHHTHHHHHHHHTSCSCHHHHHHHHHHHHHH-SCSCCCBCSSSSSBCCHHHHTCEEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhc-CCCceeeeCCCCcccchHhccCEecHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999864 456899999999999999999999999999999999999
Q ss_pred HHHHHhhhheecCCCCCCc
Q psy14623 571 VKMILKIDDIRSPNDGICD 589 (622)
Q Consensus 571 a~~lL~iD~iI~~~~~~~~ 589 (622)
|++|||+|++|...+....
T Consensus 514 a~~iL~id~ii~~~~~~~~ 532 (550)
T 3p9d_G 514 TNLILSVDETITNKGSESA 532 (550)
T ss_dssp HHHHHTEEEEECCCCCC--
T ss_pred HHHHHhHHHHhhCCCcccc
Confidence 9999999999998665443
No 15
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2.1e-107 Score=902.49 Aligned_cols=504 Identities=30% Similarity=0.461 Sum_probs=482.2
Q ss_pred hhcccHHHHHHHHHHHHHHHHHhccccCccccceeeecCCCCeEEeccHHHHhhhcccCChhHHHHHHHHhhccccccCc
Q psy14623 28 KRIIGNDAIKSHIVAAKNIANTLKTSLGPKGLDKMMVSSDGDVTVTNDGATILKLMDVDHEIAKLMVQLSQSQDDEIGDG 107 (622)
Q Consensus 28 ~~~~g~~~~~~~~~a~~~la~~v~tslGP~G~~kmi~~~~g~~~ITnDG~tIl~~l~~~hP~akll~~~a~~~~~~~GDG 107 (622)
...+|.+++.+|+.||+.|+++|||||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++||+++|||
T Consensus 4 ~~~~~~~a~~~ni~a~~~la~~vkttlGPkG~~kml~~~~g~~~iTnDG~tIlk~i~v~hp~akll~~~a~~qd~e~GDG 83 (517)
T 3iyg_Z 4 EVARAQAALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLLHEMQIQHPTASLIAKVATAQDDITGDG 83 (517)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHHHHHHHHHHHHHHHHhCCC
Confidence 44688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhccccccCCCCCChHHHHHHHHHhhcCccchhhHHHH
Q psy14623 108 TTGVVVLAGALLEQAEHLLDKGIHPIRIADGFELAAQCAVKHLETIADSFPVNPDNLEPLIKTAMTTLGSKIINKCHRQM 187 (622)
Q Consensus 108 Ttt~vlLa~~Ll~~a~~li~~gi~p~~Ii~g~~~a~~~~l~~L~~~s~~i~~~~~~~~~L~~va~tsl~sk~~~~~~~~l 187 (622)
|||+++||++||+++.+++++|+||+.|++||++|++.++++|++++.+++. +++.|.++|+|++++|+.+.+.++|
T Consensus 84 TTtvvvLa~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~---~~~~L~~va~tsl~sKi~~~~~d~l 160 (517)
T 3iyg_Z 84 TTSNVLIIGELLKQADLYISEGLHPRIITEGFEAAKEKALQFLEQVKVSKEM---DRETLIDVARTSLRTKVHAELADVL 160 (517)
T ss_pred ceeHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhhCcCCCC---CHHHHHHHHHHHhccccchhHHHHH
Confidence 9999999999999999999999999999999999999999999999876643 5789999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCCcccEEEEEccCCCccceeEEeeEEEeecCCCCCCCcccccceEEEecCCCCCCCCCCCce
Q psy14623 188 AEIAVNAVMAVADLEKRDVNFELIKVEGKVGGKLEDTMLVKGVVIDKDFSHPQMPKELRDVKLAILTCPFEPPRPKTKHN 267 (622)
Q Consensus 188 a~lv~~Av~~v~~~~~~~~~~~~I~I~~~~G~~~~dS~li~Giv~~~~~~~~~~~~~~~n~ki~ll~~~l~~~~~~~~~~ 267 (622)
+++++||+..+.+. +..+|+++|+|++++|++..||++++|++|+++|.||+||+.++||||++++++|++++++.+++
T Consensus 161 a~l~vdaV~~V~~~-~~~~dl~~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~p~m~~~ien~kIll~~~~le~~k~e~~~~ 239 (517)
T 3iyg_Z 161 TEAVVDSILAIKKQ-DEPIDLFMVEIMEMKHKSETDTSLIRGLVLDHGARHPDMKKRVEDAYILTCNVSLEYEKTEVNSG 239 (517)
T ss_pred HHHHHHHhheeccC-CCcCChhHheeeeecCCCccccceEeeEEEeccCCCCCccccccCCeEEEeccccccccccccee
Confidence 99999999988643 34688899999999999999999999999999999999999999999999999999999999999
Q ss_pred eEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCc---------EEEEecCCCHHHHHHHHHCCCcEEeecCcccHHHHHHH
Q psy14623 268 LDVQSVEDYKELRKYEQEKFASMVDKVKATGAT---------LAICQWGFDDEANHLLLQKQLPAVRWVGGPDIELIAIV 338 (622)
Q Consensus 268 ~~i~~~~~l~~~~~~e~~~i~~~v~~l~~~g~~---------lVi~~~~I~~~al~~L~~~~I~~i~~v~~~~L~~ia~~ 338 (622)
+.++++++++.+.+.|++++...+++|...+++ |||++++|++.+++||.++||++++++++.+|+|||++
T Consensus 240 ~~i~~~~~l~~~~~~E~~~i~~~v~~I~~~~~~v~~~~~~~lvIi~~~~I~d~al~~L~~~gI~~v~~v~~~~leria~~ 319 (517)
T 3iyg_Z 240 FFYKSAEEREKLVKAERKFIEDRVKKIIELKKKVCGDSDKGFVVINQKGIDPFSLDALAKEGIIALRRAKRRNMERLTLA 319 (517)
T ss_pred EEeCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCceEEEecccCCHHHHHHHHHCCCEEEEecCHHHHHHHHHH
Confidence 999999999999999999999999999988776 48888999999999999999999999999999999999
Q ss_pred hCCeeccCccchhhhhhcccccCcccccccccccCccccchhhhhcCCcccccccccCccc-ccccccEEEEEeccccce
Q psy14623 339 TGGRIVPRFEELTSEKLGKAGLGNQFWYNQRSHAGHTDIELIAIVTGGRIVPRFEELTSEK-LGKAGLVREISFGTTKDH 417 (622)
Q Consensus 339 tGa~ii~~~~~l~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-lG~~~~v~~~~~g~~~~~ 417 (622)
|||++++++++ ++++. +|+|+ |++..+| +++
T Consensus 320 tGa~iv~~l~~---------------------------------------------l~~~~~LG~a~-v~e~~ig--~~~ 351 (517)
T 3iyg_Z 320 CGGIALNSLDD---------------------------------------------LNPDCLLGHAG-VYEYTLG--EEK 351 (517)
T ss_pred hCCEEecchhh---------------------------------------------CcccccCCcce-EEEEEEc--Cce
Confidence 99999998877 77788 99999 9999998 789
Q ss_pred EEEEeccCCCceEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHhcCccccCCChhhhhHHHHHHHhhccccchhHHHHHH
Q psy14623 418 MLVIEECENSKAVTIFIRGGNKMIIEEAKRSIHDALCVVRNLVTENRVVYGGGAAEVSCAIAVAAEADKISSIEQYAFRA 497 (622)
Q Consensus 418 ~~~~~~~~~~~~~TIll~G~t~~~l~E~~~~l~dal~~~~~~l~~g~vvpGGGa~E~~ls~~L~~~~~~~~~~~~~~~~~ 497 (622)
++||++|++++.|||+|||+|+.+++|.||+++|||+++|+++++|++|||||++|++|+.+|++++.++++++|+++++
T Consensus 352 ~~~~~g~~~~~~~TI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~ 431 (517)
T 3iyg_Z 352 FTFIEKCNNPRSVTLLIKGPNKHTLTQIKDAIRDGLRAVKNAIDDGCVVPGAGAVEVAMAEALVKYKPSVKGRAQLGVQA 431 (517)
T ss_pred EEEEeCCCCchhheeeecCCcHHHHHHHHHHHHHHHHHHHHHHhcceEecCccHHHHHHHHHHHHHhccCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999998899999999999
Q ss_pred HHHHHHHHHHHHHhhcCCChHHHHHHHHHHhhhcCCCceEEEccCCcccccccCCcccchHHHHHHHHHHHHHHHHHHhh
Q psy14623 498 FADALESIPLALAENSGLSPIETLTEVKSRQVKEVNPALGIDCMLNGTNDMKQQNVIEALRSKKQQILLSTQLVKMILKI 577 (622)
Q Consensus 498 ~a~AL~~ip~~L~~NaG~d~~~il~~L~~~~~~~~~~~~Gid~~~g~~~d~~~~gI~dp~~vk~~~L~~A~e~a~~lL~i 577 (622)
||+|||.+|++|++|||+|+.+++++|++.|.. ++.++|||+.+|++.||++.|||||+.||+++|+.|+|+|++||||
T Consensus 432 ~a~ALe~iP~~La~NaG~d~~~~v~~l~~~h~~-~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~i 510 (517)
T 3iyg_Z 432 FADALLIIPKVLAQNSGFDLQETLVKVQAEHSE-SGQLVGVDLNTGEPMVAAEAGIWDNYCVKKQLLHSCTVIATNILLV 510 (517)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc-CCCcEEEeCCCCcccchhhccCeecHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999874 4578999999999999999999999999999999999999999999
Q ss_pred hheecCC
Q psy14623 578 DDIRSPN 584 (622)
Q Consensus 578 D~iI~~~ 584 (622)
|++|.++
T Consensus 511 D~ii~~~ 517 (517)
T 3iyg_Z 511 DEIMRAG 517 (517)
T ss_pred HHHhhCC
Confidence 9999764
No 16
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=100.00 E-value=2.1e-108 Score=912.72 Aligned_cols=508 Identities=34% Similarity=0.575 Sum_probs=486.4
Q ss_pred hhhcccHHHHHHHHHHHHHHHHHhccccCccccceeeecCCCCeEEeccHHHHhhhcccCChhHHHHHHHHhhccccccC
Q psy14623 27 QKRIIGNDAIKSHIVAAKNIANTLKTSLGPKGLDKMMVSSDGDVTVTNDGATILKLMDVDHEIAKLMVQLSQSQDDEIGD 106 (622)
Q Consensus 27 ~~~~~g~~~~~~~~~a~~~la~~v~tslGP~G~~kmi~~~~g~~~ITnDG~tIl~~l~~~hP~akll~~~a~~~~~~~GD 106 (622)
+++.+|.+++..|+.||+.|+++|||||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++||+++||
T Consensus 12 ~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~akll~e~a~~qd~e~GD 91 (528)
T 3p9d_D 12 KNKEKPQEVRKANIIAARSVADAIRTSLGPKGMDKMIKTSRGEIIISNDGHTILKQMAILHPVARMLVEVSAAQDSEAGD 91 (528)
T ss_dssp CBCCCHHHHHHHHHHHHHHHHHHHTTTSSTTCCCEEEECSSCCEEEECCHHHHHHHSCCCCTTHHHHHHHHHHHHHHTCS
T ss_pred chhcchHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEECCHHHHHHHcccCCHHHHHHHHHHHHhhhhhCC
Confidence 46689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhccccccCCCCCChHHHHHHHHHhhcCccchhhHHH
Q psy14623 107 GTTGVVVLAGALLEQAEHLLDKGIHPIRIADGFELAAQCAVKHLETIADSFPVNPDNLEPLIKTAMTTLGSKIINKCHRQ 186 (622)
Q Consensus 107 GTtt~vlLa~~Ll~~a~~li~~gi~p~~Ii~g~~~a~~~~l~~L~~~s~~i~~~~~~~~~L~~va~tsl~sk~~~~~~~~ 186 (622)
||||+++||++||+++.+++++|+||+.|++||++|++.++++|++++.+++ ..+++.|.++|+|+++||++++++++
T Consensus 92 GTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~--~~~~e~l~~va~tsl~sK~~~~~~~~ 169 (528)
T 3p9d_D 92 GTTSVVILTGALLGAAERLLNKGIHPTIIADSFQSAAKRSVDILLEMCHKVS--LSDREQLVRAASTSLSSKIVSQYSSF 169 (528)
T ss_dssp CSHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCC--SCCHHHHHHHHHHHSCSSSCSTTHHH
T ss_pred ChhhHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHhhCCCC--CCCHHHHHHHHHHHhcCCccchhHHH
Confidence 9999999999999999999999999999999999999999999999976654 34689999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCCcccEEEEEccCCCccceeEEeeEEEeecCCCCC-CCcccccceEEEecCCCCCCCCCCC
Q psy14623 187 MAEIAVNAVMAVADLEKRDVNFELIKVEGKVGGKLEDTMLVKGVVIDKDFSHPQ-MPKELRDVKLAILTCPFEPPRPKTK 265 (622)
Q Consensus 187 la~lv~~Av~~v~~~~~~~~~~~~I~I~~~~G~~~~dS~li~Giv~~~~~~~~~-~~~~~~n~ki~ll~~~l~~~~~~~~ 265 (622)
|+++++||+.++++.....+|+++|+|++++|++++||++++|++|+++|.||+ ||+.++|+||++++++|++++++.+
T Consensus 170 i~~livdAv~~V~~~~~~~i~v~~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~~~~m~~~ien~kIll~~~~le~~k~~~~ 249 (528)
T 3p9d_D 170 LAPLAVDSVLKISDENSKNVDLNDIRLVKKVGGTIDDTEMIDGVVLTQTAIKSAGGPTRKEKAKIGLIQFQISPPKPDTE 249 (528)
T ss_dssp HHHHHHHHHHTTCCTTTTCCCGGGSBCCCCCSSCSCCCEEESSCBCCCCCCCSSSCCSEESSEEEEEECCCSSCCCCSSE
T ss_pred HHHHHHHHHHHhccccCCccceEEEEEEEecCCCccceEEEeeeEEeecccCcccCcccccCceEEEEeccccccccccC
Confidence 999999999999753334688899999999999999999999999999999999 9999999999999999999999999
Q ss_pred ceeEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEecCC-----CHHHHHHHHHCCCcEEeecCcccHHHHHHHhC
Q psy14623 266 HNLDVQSVEDYKELRKYEQEKFASMVDKVKATGATLAICQWGF-----DDEANHLLLQKQLPAVRWVGGPDIELIAIVTG 340 (622)
Q Consensus 266 ~~~~i~~~~~l~~~~~~e~~~i~~~v~~l~~~g~~lVi~~~~I-----~~~al~~L~~~~I~~i~~v~~~~L~~ia~~tG 340 (622)
+++.++++++++.+.++|++++.++++++.+.|++|||++++| ++.+++||.++||.+++++++++|+|||++||
T Consensus 250 ~~i~i~~~~~~~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~a~~~~al~~L~~~~I~av~~~~k~~le~ia~~tG 329 (528)
T 3p9d_D 250 NNIIVNDYRQMDKILKEERAYLLNICKKIKKAKCNVLLIQKSILRDAVNDLALHFLSKLNIMVVKDIEREEIEFLSKGLG 329 (528)
T ss_dssp EEEEESSSSHHHHHTHHHHHHHHHHHHHHHHTTCCEEEESSCSCTTSCSCHHHHHHTTTSCCEEECCCTHHHHHHHHHHT
T ss_pred ceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCcccccCCHHHHHHHHHcCcEEEEeCCHHHHHHHHHHHC
Confidence 9999999999999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred CeeccCccchhhhhhcccccCcccccccccccCccccchhhhhcCCcccccccccCcccccccccEEEEEeccccceEEE
Q psy14623 341 GRIVPRFEELTSEKLGKAGLGNQFWYNQRSHAGHTDIELIAIVTGGRIVPRFEELTSEKLGKAGLVREISFGTTKDHMLV 420 (622)
Q Consensus 341 a~ii~~~~~l~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lG~~~~v~~~~~g~~~~~~~~ 420 (622)
|++++++++ ++++++|+|+.|++..+| ++++++
T Consensus 330 a~ii~~~~~---------------------------------------------l~~~~LG~a~~v~~~~ig--~~~~~~ 362 (528)
T 3p9d_D 330 CKPIADIEL---------------------------------------------FTEDRLDSADLVEEIDSD--GSKIVR 362 (528)
T ss_dssp CCCCSCSTT---------------------------------------------CCSSSEEEESCEECCEET--TEECCB
T ss_pred CEEeccccc---------------------------------------------CCHHHCCcccEEEEEEEC--CEEEEE
Confidence 999999876 778899999999999888 689999
Q ss_pred EeccC--C-CceEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHhcCccccCCChhhhhHHHHHHHhhccccchhHHHHHH
Q psy14623 421 IEECE--N-SKAVTIFIRGGNKMIIEEAKRSIHDALCVVRNLVTENRVVYGGGAAEVSCAIAVAAEADKISSIEQYAFRA 497 (622)
Q Consensus 421 ~~~~~--~-~~~~TIll~G~t~~~l~E~~~~l~dal~~~~~~l~~g~vvpGGGa~E~~ls~~L~~~~~~~~~~~~~~~~~ 497 (622)
|++|+ + ++.|||+|||+|+.+++|.||+++|||+++|+++++|++|||||++|++|+.+|++++.+.++++|+++++
T Consensus 363 i~g~~~~~~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~ 442 (528)
T 3p9d_D 363 VTGIRNNNARPTVSVVIRGANNMIIDETERSLHDALCVIRCLVKERGLIAGGGAPEIEISRRLSKEARSMEGVQAFIWQE 442 (528)
T ss_dssp CTTBCCGGGCCCCEEECCCSSTTHHHHHHHHHTTTHHHHHHHHHSSCEEETTTHHHHHHHHHHHHCCTTSCHHHHTTHHH
T ss_pred EEcccccCCCceEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCccCCCCHHHHHHHHHHHHHhhccChHHHHHHHH
Confidence 99998 6 89999999999999999999999999999999999999999999999999999999988889999999999
Q ss_pred HHHHHHHHHHHHHhhcCCChHHHHHHHHHHhhhcCCCceEEEccCCcccccccCCcccchHHHHHHHHHHHHHHHHHHhh
Q psy14623 498 FADALESIPLALAENSGLSPIETLTEVKSRQVKEVNPALGIDCMLNGTNDMKQQNVIEALRSKKQQILLSTQLVKMILKI 577 (622)
Q Consensus 498 ~a~AL~~ip~~L~~NaG~d~~~il~~L~~~~~~~~~~~~Gid~~~g~~~d~~~~gI~dp~~vk~~~L~~A~e~a~~lL~i 577 (622)
|++||+.||++|++|||+|+.+++.+|++.|.. ++.++|||+.+|++.||++.|||||+.||+++|+.|+|+|++||||
T Consensus 443 ~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~-~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~i 521 (528)
T 3p9d_D 443 FASALEVIPTTLAENAGLNSIKVVTELRSKHEN-GELNDGISVRRSGTTNTYEEHILQPVLVSTSAITLASECVKSILRI 521 (528)
T ss_dssp HHHHHTHHHHHHHHTTSSCHHHHHHHHTTCCCS-SSCCCCCCSSSSSCCCHHHHCCEEEHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc-cCCccceecCCCCccchHhccCeecHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999998864 3567999999999999999999999999999999999999999999
Q ss_pred hheecCC
Q psy14623 578 DDIRSPN 584 (622)
Q Consensus 578 D~iI~~~ 584 (622)
|++|.++
T Consensus 522 D~ii~~~ 528 (528)
T 3p9d_D 522 DDIAFSR 528 (528)
T ss_dssp SCCCBCC
T ss_pred hHheecC
Confidence 9999763
No 17
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=100.00 E-value=7.3e-109 Score=922.80 Aligned_cols=527 Identities=24% Similarity=0.402 Sum_probs=480.5
Q ss_pred CccccCCCCCceeeeccchhhhhccc-HHHHHHHHHHHHHHHHHhccccCccccceeeecCCCCeEEeccHHHHhhhccc
Q psy14623 7 PGLMMDEFGRPFIILRNQQEQKRIIG-NDAIKSHIVAAKNIANTLKTSLGPKGLDKMMVSSDGDVTVTNDGATILKLMDV 85 (622)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~a~~~la~~v~tslGP~G~~kmi~~~~g~~~ITnDG~tIl~~l~~ 85 (622)
|+++.|+.+ +..+++++. ++..| .+++.+|+.||+.|+++|||||||+||+|||+++.|+++|||||+|||++|++
T Consensus 1 ~~~~~~~~~-~~~~l~~~~--~~~~g~~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v 77 (568)
T 3p9d_H 1 MSLRLPQNP-NAGLFKQGY--NSYSNADGQIIKSIAAIRELHQMCLTSMGPCGRNKIIVNHLGKIIITNDAATMLRELDI 77 (568)
T ss_dssp ----CCCCC-CCSSCCSSC--CBCCCHHHHHHHHHHHHHHHHHHHHTTSSSSSCEEEEECTTSCEEEESCHHHHTTTCCC
T ss_pred CCCCCCCcc-hhhhhhcCc--cccccHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHccc
Confidence 466777664 346678874 55677 57999999999999999999999999999999999999999999999999999
Q ss_pred CChhHHHHHHHHhhccccccCchhhHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhccccccCCCCCChH
Q psy14623 86 DHEIAKLMVQLSQSQDDEIGDGTTGVVVLAGALLEQAEHLLDKGIHPIRIADGFELAAQCAVKHLETIADSFPVNPDNLE 165 (622)
Q Consensus 86 ~hP~akll~~~a~~~~~~~GDGTtt~vlLa~~Ll~~a~~li~~gi~p~~Ii~g~~~a~~~~l~~L~~~s~~i~~~~~~~~ 165 (622)
+||+|+|++++|++||+++||||||+++||++||+++.+++.+|+||+.|++||++|++.++++|++++.++..+..+++
T Consensus 78 ~hP~Akll~e~a~~qd~e~GDGTTtvvvLa~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~e~L~~~a~~v~~~~~~~~ 157 (568)
T 3p9d_H 78 VHPAVKVLVMATEQQKIDMGDGTNLVMILAGELLNVSEKLISMGLSAVEIIQGYNMARKFTLKELDEMVVGEITDKNDKN 157 (568)
T ss_dssp CCHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCCSCCCCCCTTH
T ss_pred CCHHHHHHHHHHHhhhceeCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999877655556789
Q ss_pred HHHHHHHHhhcCccchhhHHHHHHHHHHHHHHhccc-----ccCCCCcccEEEEEccCCCccceeEEeeEEEeecCCCCC
Q psy14623 166 PLIKTAMTTLGSKIINKCHRQMAEIAVNAVMAVADL-----EKRDVNFELIKVEGKVGGKLEDTMLVKGVVIDKDFSHPQ 240 (622)
Q Consensus 166 ~L~~va~tsl~sk~~~~~~~~la~lv~~Av~~v~~~-----~~~~~~~~~I~I~~~~G~~~~dS~li~Giv~~~~~~~~~ 240 (622)
.|.++|+|+++||+.+++ ++|+++++||+.++.+. ....+|+++|+|++++|++++||++++|++|++++. +
T Consensus 158 ~l~~va~tsl~sK~~~~~-~~i~~livdAv~~V~~~~~~~~~~~~~dl~~I~I~k~~Ggs~~dS~lv~G~v~dk~~~--~ 234 (568)
T 3p9d_H 158 ELLKMIKPVISSKKYGSE-DILSELVSEAVSHVLPVAQQAGEIPYFNVDSIRVVKIMGGSLSNSTVIKGMVFNREPE--G 234 (568)
T ss_dssp HHHHHHHHHHTTTSTTCH-HHHHHHHHHHHTTSCC---------CCCGGGCEEEEEESSCGGGCEEESSCCBSSCBS--S
T ss_pred HHHHHHHHHhhccCcchH-HHHHHHHHHHHHHHhhccccccCCcccccceEEEEEccCCCcchheeeccEEEeeccc--C
Confidence 999999999999999987 99999999999999753 223588889999999999999999999999999984 7
Q ss_pred CCcccc---cceEEEecCCCCCCCCCCCceeEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHH
Q psy14623 241 MPKELR---DVKLAILTCPFEPPRPKTKHNLDVQSVEDYKELRKYEQEKFASMVDKVKATGATLAICQWGFDDEANHLLL 317 (622)
Q Consensus 241 ~~~~~~---n~ki~ll~~~l~~~~~~~~~~~~i~~~~~l~~~~~~e~~~i~~~v~~l~~~g~~lVi~~~~I~~~al~~L~ 317 (622)
|+++++ |+||++++++|++++++.++++.+++++++..+.++|++|++++++++.+.|++|||++++|++.+++||.
T Consensus 235 m~~~i~~~~n~kIlll~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~~al~~L~ 314 (568)
T 3p9d_H 235 HVKSLSEDKKHKVAVFTCPLDIANTETKGTVLLHNAQEMLDFSKGEEKQIDAMMKEIADMGVECIVAGAGVGELALHYLN 314 (568)
T ss_dssp GGGSCCCCSSCEEEEECSCSSSCCCSSSCEEECCSHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECSCCCHHHHHHHH
T ss_pred CcEEEecCCcceEEEEccCccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEECCCcChHHHHHHH
Confidence 899999 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HCCCcEEeecCcccHHHHHHHhCCeeccCccchhhhhhcccccCcccccccccccCccccchhhhhcCCcccccccccCc
Q psy14623 318 QKQLPAVRWVGGPDIELIAIVTGGRIVPRFEELTSEKLGKAGLGNQFWYNQRSHAGHTDIELIAIVTGGRIVPRFEELTS 397 (622)
Q Consensus 318 ~~~I~~i~~v~~~~L~~ia~~tGa~ii~~~~~l~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 397 (622)
++||++++++++.+|+|||++|||++++++++ +++
T Consensus 315 ~~gI~av~~v~~~~leria~~tGa~ivs~l~~---------------------------------------------l~~ 349 (568)
T 3p9d_H 315 RYGILVLKVPSKFELRRLCRVCGATPLPRLGA---------------------------------------------PTP 349 (568)
T ss_dssp HHTCEEECCCCHHHHHHHHHHHSCCCCSSSSC---------------------------------------------CCG
T ss_pred HCCeEEEecCCHHHHHHHHHHhCCEEEecccc---------------------------------------------CCH
Confidence 99999999999999999999999999999877 778
Q ss_pred ccccccccEEEEEeccccceEEEEeccC--CCceEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHh--cCccccCCChhh
Q psy14623 398 EKLGKAGLVREISFGTTKDHMLVIEECE--NSKAVTIFIRGGNKMIIEEAKRSIHDALCVVRNLVT--ENRVVYGGGAAE 473 (622)
Q Consensus 398 ~~lG~~~~v~~~~~g~~~~~~~~~~~~~--~~~~~TIll~G~t~~~l~E~~~~l~dal~~~~~~l~--~g~vvpGGGa~E 473 (622)
+.+|+|+.|++..+| +++|+||++|+ .++.|||+|||+|+.+++|.||+++|||+++|++++ ++++|||||++|
T Consensus 350 ~~LG~a~~v~~~~ig--~~~~~~~~g~~~l~~~~~TIllrG~t~~~l~E~er~i~DAL~vvr~av~~~d~~iVpGGGa~E 427 (568)
T 3p9d_H 350 EELGLVETVKTMEIG--GDRVTVFKQEQGEISRTSTIILRGATQNNLDDIERAIDDGVAAVKGLMKPSGGKLLPGAGATE 427 (568)
T ss_dssp GGCEECSCCCCCEET--TEECBCCCCCSSSCCSSCEEEEEESCHHHHHHHHHHHHHHHHHHHHTTSTTCCCCCCTTTHHH
T ss_pred HHCCcceEEEEEEec--CceEEEEecCCCCCCCeEEEEECCCcHHHHHHHHHHHHHHHHHHHHHhcccCCeEEeCCcHHH
Confidence 889999999999998 68999999998 689999999999999999999999999999999999 888999999999
Q ss_pred hhHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHhhh-------cCCCceEEEccCCc--
Q psy14623 474 VSCAIAVAAEADKISSIEQYAFRAFADALESIPLALAENSGLSPIETLTEVKSRQVK-------EVNPALGIDCMLNG-- 544 (622)
Q Consensus 474 ~~ls~~L~~~~~~~~~~~~~~~~~~a~AL~~ip~~L~~NaG~d~~~il~~L~~~~~~-------~~~~~~Gid~~~g~-- 544 (622)
++|+.+|++++.++++++|+++++||+||+.||++|++|||+|+.+++++|++.|.. +++.++|||+.+|+
T Consensus 428 ~~ls~~L~~~a~~~~g~eq~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~~~~G~d~~~g~~~ 507 (568)
T 3p9d_H 428 IELISRITKYGERTPGLLQLAIKQFAVAFEVVPRTLAETAGLDVNEVLPNLYAAHNVTEPGAVKTDHLYKGVDIDGESDE 507 (568)
T ss_dssp HHHHHHHHHHHHTCCSTHHHHHHHHHHGGGHHHHHHHHHHTCCHHHHHHHHHHCCCCSSCCCCCCTTSSSCCCHHHHTCC
T ss_pred HHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhhhcccccccCCCceeEcccCCCcc
Confidence 999999999999999999999999999999999999999999999999999998864 13567999999997
Q ss_pred -ccccccCCcccchHHHHHHHHHHHHHHHHHHhhhheecCCCC
Q psy14623 545 -TNDMKQQNVIEALRSKKQQILLSTQLVKMILKIDDIRSPNDG 586 (622)
Q Consensus 545 -~~d~~~~gI~dp~~vk~~~L~~A~e~a~~lL~iD~iI~~~~~ 586 (622)
+.||++.|||||+.||+++|+.|+|+|++|||||++|...+.
T Consensus 508 ~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~~~ 550 (568)
T 3p9d_H 508 GVKDIREENIYDMLATKKFAINVATEAATTVLSIDQIIMAKKA 550 (568)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHCCEECBCCC------------
T ss_pred cccChHHccCEEcHHHHHHHHHHHHHHHHHHHhHHHHhhcccc
Confidence 999999999999999999999999999999999999986543
No 18
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=100.00 E-value=2.7e-107 Score=908.02 Aligned_cols=514 Identities=25% Similarity=0.417 Sum_probs=485.7
Q ss_pred hhhcccHHHHHHHHHHHHHHHHHhccccCccccceeeecCCCCeEEeccHHHHhhhcccCChhHHHHHHHHhhccccccC
Q psy14623 27 QKRIIGNDAIKSHIVAAKNIANTLKTSLGPKGLDKMMVSSDGDVTVTNDGATILKLMDVDHEIAKLMVQLSQSQDDEIGD 106 (622)
Q Consensus 27 ~~~~~g~~~~~~~~~a~~~la~~v~tslGP~G~~kmi~~~~g~~~ITnDG~tIl~~l~~~hP~akll~~~a~~~~~~~GD 106 (622)
.++.+|.+++..|+.||+.|+++|||||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++||+++||
T Consensus 10 ~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~akll~e~a~~qd~e~GD 89 (546)
T 3p9d_F 10 AESLRRDAALKVNVTSAEGLQSVLETNLGPKGTLKMLVDGAGNIKLTKDGKVLLTEMQIQSPTAVLIARAAAAQDEITGD 89 (546)
T ss_dssp EEEEEHHHHHHHHHHHHTHHHHHHTTTSSTTCCEEEEECTTSCEEEECCHHHHHHTSCCCCHHHHHHHHHHHHHHHHCSS
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHHHHHHHHHHHHHHHHhCC
Confidence 35578999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhccccccCCCCCChHHHHHHHHHhhcCccchhhHHH
Q psy14623 107 GTTGVVVLAGALLEQAEHLLDKGIHPIRIADGFELAAQCAVKHLETIADSFPVNPDNLEPLIKTAMTTLGSKIINKCHRQ 186 (622)
Q Consensus 107 GTtt~vlLa~~Ll~~a~~li~~gi~p~~Ii~g~~~a~~~~l~~L~~~s~~i~~~~~~~~~L~~va~tsl~sk~~~~~~~~ 186 (622)
||||+++||++||+++.+++++|+||+.|++||++|++.++++|+++++++..+..+++.|.++|+|++++|+.+.+.++
T Consensus 90 GTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~~~~~~~~L~~vA~tsl~sKi~~~~~d~ 169 (546)
T 3p9d_F 90 GTTTVVCLVGELLRQAHRFIQEGVHPRIITDGFEIARKESMKFLDEFKISKTNLSNDREFLLQVARSSLLTKVDADLTEV 169 (546)
T ss_dssp CHHHHHHHHHHHHHHHHHHTTTTBCHHHHHHHHHHHHHHHHHHHHHHCCCCSSSSTTCHHHHHHHHHHTCSTTHHHHCSS
T ss_pred CcccHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHhhccccccccCHHHHHHHHHHHhCCCcchhHHHH
Confidence 99999999999999999999999999999999999999999999999877654335788999999999999999999999
Q ss_pred HHHHHHHHHHHhcccccCCCCcccEEEEEccCCCccceeEEeeEEEeecCCCCCCCcccccceEEEecCCCCCCCCCCCc
Q psy14623 187 MAEIAVNAVMAVADLEKRDVNFELIKVEGKVGGKLEDTMLVKGVVIDKDFSHPQMPKELRDVKLAILTCPFEPPRPKTKH 266 (622)
Q Consensus 187 la~lv~~Av~~v~~~~~~~~~~~~I~I~~~~G~~~~dS~li~Giv~~~~~~~~~~~~~~~n~ki~ll~~~l~~~~~~~~~ 266 (622)
|+++++||+..+.+.....+|+++|+|++++|++..||++++|++|+++|.+|+||+.++||||++++|+|++++++.++
T Consensus 170 la~l~vdaV~~V~~~~~~~~dl~~I~i~ki~Gg~~~ds~lv~G~v~dk~~~~~~m~~~~en~kIll~~~~Le~~k~e~~~ 249 (546)
T 3p9d_F 170 LTPIVTDAVLSVYDAQADNLDLHMVEIMQMQHLSPKDTTFIKGLVLDHGGRHPDMPTRVKNAYVLILNVSLEYEKTEVNS 249 (546)
T ss_dssp HHHHHHHHHHHTHHHHHTTCCGGGEEEECCCCSCTTTCCCCSSCEESCCCCSSSSCSSBCSCCCCEECCCSSSCCCSSCB
T ss_pred HHHHHHHhheEeecCCCCcccchheEEEEecCCCccccEEEeeEEEecccccccCcceecCceEEEecCcccccccccCc
Confidence 99999999999875333468899999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEecCHHHHHHHHHHHHHHHHHHHHHHHhcC---------C-cEEEEecCCCHHHHHHHHHCCCcEEeecCcccHHHHH
Q psy14623 267 NLDVQSVEDYKELRKYEQEKFASMVDKVKATG---------A-TLAICQWGFDDEANHLLLQKQLPAVRWVGGPDIELIA 336 (622)
Q Consensus 267 ~~~i~~~~~l~~~~~~e~~~i~~~v~~l~~~g---------~-~lVi~~~~I~~~al~~L~~~~I~~i~~v~~~~L~~ia 336 (622)
++.++++++++.+.+.|++++.+.+++|...+ . .|||++++|++.+++||.++||++++++++.+|+|||
T Consensus 250 ~~~i~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~v~~~~~g~~~vIi~~k~I~~~Al~~L~~~gI~~vr~v~~~~leria 329 (546)
T 3p9d_F 250 GFFYSSADQRDKLAASERKFVDAKLKKIIDLKNEVCGMDPDKGFVIINQKGIDPMSLDVFAKHNILALRRAKRRNMERLQ 329 (546)
T ss_dssp CCCCCSSSCHHHHHHHHHHHHHHHHHHHHHCC-----------CEEEESSCCCHHHHHHHTTTTCEEECCCCHHHHHHHH
T ss_pred eEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCceEEEecCcCcHHHHHHHHHCCCeeEecCCHHHHHHHH
Confidence 99999999999999999999999999998754 3 3888889999999999999999999999999999999
Q ss_pred HHhCCeeccCccchhhhhhcccccCcccccccccccCccccchhhhhcCCcccccccccCcccccccccEEEEEeccccc
Q psy14623 337 IVTGGRIVPRFEELTSEKLGKAGLGNQFWYNQRSHAGHTDIELIAIVTGGRIVPRFEELTSEKLGKAGLVREISFGTTKD 416 (622)
Q Consensus 337 ~~tGa~ii~~~~~l~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lG~~~~v~~~~~g~~~~ 416 (622)
++|||++++++++ ++++.+|+|+.|++..+| ++
T Consensus 330 ~~tGa~ii~~l~~---------------------------------------------l~~~~LG~a~~v~~~~ig--~~ 362 (546)
T 3p9d_F 330 LVTGGEAQNSVED---------------------------------------------LSPQILGFSGLVYQETIG--EE 362 (546)
T ss_dssp HTTTBCCCCCCSS---------------------------------------------CSTTCCBCCCCBCBCCCS--SC
T ss_pred HHhCCEEecchhh---------------------------------------------CCHhHCCcccEEEEEEec--Cc
Confidence 9999999998877 777899999999998998 78
Q ss_pred eEEEEeccCCCceEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHhcCccccCCChhhhhHHHHHHH---hhccccchhHH
Q psy14623 417 HMLVIEECENSKAVTIFIRGGNKMIIEEAKRSIHDALCVVRNLVTENRVVYGGGAAEVSCAIAVAA---EADKISSIEQY 493 (622)
Q Consensus 417 ~~~~~~~~~~~~~~TIll~G~t~~~l~E~~~~l~dal~~~~~~l~~g~vvpGGGa~E~~ls~~L~~---~~~~~~~~~~~ 493 (622)
+|+||++|++++.|||+|||+|+.+++|.||+++|||+++|+++++|++|||||++|++|+.+|++ ++.++++++|+
T Consensus 363 ~~~~i~g~~~~~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~~~~g~eq~ 442 (546)
T 3p9d_F 363 KFTYVTENTDPKSCTILIKGSTHYALAQTKDAVRDGLRAVANVLKDKNIIPGAGAFYIALSRYLRSANMNKLGAKGKTKT 442 (546)
T ss_dssp CCEECSSCSCCSCEEEECCCSCHHHHHHHHHHHHHHHHHHHHHTTSCCEEETTTHHHHHHHHHHHHHHTTTTTTTSHHHH
T ss_pred eEEEEecCCCCceEEEEECCCCHHHHHHHHHHHHHHHHHHHHHhcCCcEEeCCCHHHHHHHHHHHhhhhhhhcCchHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999 58888999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHhhh----cCCCceEEEccCCcccccccCCcccchHHHHHHHHHHHH
Q psy14623 494 AFRAFADALESIPLALAENSGLSPIETLTEVKSRQVK----EVNPALGIDCMLNGTNDMKQQNVIEALRSKKQQILLSTQ 569 (622)
Q Consensus 494 ~~~~~a~AL~~ip~~L~~NaG~d~~~il~~L~~~~~~----~~~~~~Gid~~~g~~~d~~~~gI~dp~~vk~~~L~~A~e 569 (622)
++++|++||+.||++|++|||+|+.+++++|++.|.. .++.++|||+.+|++.||++.|||||+.||+++|+.|+|
T Consensus 443 ~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~~ 522 (546)
T 3p9d_F 443 GIEAFAEALLVIPKTLVKNSGFDPLDVLAMVEDELDDAQDSDETRYVGVDLNIGDSCDPTIEGIWDSYRVLRNAITGATG 522 (546)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHHTTSTTSSCCCCBTTTTBCCCSGGGTCEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhhhhcccCCceeeEeCCCCeecchHhccCEecHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999998863 134679999999999999999999999999999999999
Q ss_pred HHHHHHhhhheecCCCCC
Q psy14623 570 LVKMILKIDDIRSPNDGI 587 (622)
Q Consensus 570 ~a~~lL~iD~iI~~~~~~ 587 (622)
+|++|||||++|.+.+.-
T Consensus 523 ~a~~iL~iD~ii~~~~~~ 540 (546)
T 3p9d_F 523 IASNLLLCDELLRAGRST 540 (546)
T ss_dssp HHHHHHTEEEEEEECCSS
T ss_pred HHHHHHHHHHHHcCCccc
Confidence 999999999999987653
No 19
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=4.7e-105 Score=884.34 Aligned_cols=505 Identities=28% Similarity=0.432 Sum_probs=478.4
Q ss_pred hhhccc-HHHHHHHHHHHHHHHHHhccccCccccceeeecCCCCeEEeccHHHHhhhcccCChhHHHHHHHHhhcccccc
Q psy14623 27 QKRIIG-NDAIKSHIVAAKNIANTLKTSLGPKGLDKMMVSSDGDVTVTNDGATILKLMDVDHEIAKLMVQLSQSQDDEIG 105 (622)
Q Consensus 27 ~~~~~g-~~~~~~~~~a~~~la~~v~tslGP~G~~kmi~~~~g~~~ITnDG~tIl~~l~~~hP~akll~~~a~~~~~~~G 105 (622)
.++..| .+++..|+.||+.|+++|||||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++||+++|
T Consensus 3 ~~~~~g~~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~~~G 82 (512)
T 3iyg_Q 3 AKHFSGLEEAVYRNIQACKELAQTTRTAYGPNGMNKMVINHLEKLFVTNDAATILRELEVQHPAAKMIVMASHMQEQEVG 82 (512)
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCCHHHHHHHHHHHHhhhhhC
Confidence 356788 7999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CchhhHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhccccccCCCCCChHHHHHHHHHhhcCccchhhHH
Q psy14623 106 DGTTGVVVLAGALLEQAEHLLDKGIHPIRIADGFELAAQCAVKHLETIADSFPVNPDNLEPLIKTAMTTLGSKIINKCHR 185 (622)
Q Consensus 106 DGTtt~vlLa~~Ll~~a~~li~~gi~p~~Ii~g~~~a~~~~l~~L~~~s~~i~~~~~~~~~L~~va~tsl~sk~~~~~~~ 185 (622)
|||||+++||++||+++.+++++|+||+.|++||++|++.++++|++++.....+..+++.|.++|+|+++||..+ +++
T Consensus 83 DGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~~~~~~~~~~~~~~l~~va~tsl~sK~~~-~~~ 161 (512)
T 3iyg_Q 83 DGTNFVLVFAGALLELAEELLRLGLSVSEVIEGYEIACKKAHEILPDLVCCSAKNLRDVDEVSSLLHTSVMSKQYG-NEV 161 (512)
T ss_pred CChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHhCCCCcc-chH
Confidence 9999999999999999999999999999999999999999999999985433334457899999999999999876 589
Q ss_pred HHHHHHHHHHHHhcccccCCCCcccEEEEEccCCCccceeEEeeEEEeecCCCCCCCcccccceEEEecCCCCCCCCCCC
Q psy14623 186 QMAEIAVNAVMAVADLEKRDVNFELIKVEGKVGGKLEDTMLVKGVVIDKDFSHPQMPKELRDVKLAILTCPFEPPRPKTK 265 (622)
Q Consensus 186 ~la~lv~~Av~~v~~~~~~~~~~~~I~I~~~~G~~~~dS~li~Giv~~~~~~~~~~~~~~~n~ki~ll~~~l~~~~~~~~ 265 (622)
+|++++++|+.++++. ...+|+++|+|.+.+|+++.||++++|++|+++|.+ ||++++|+||+++++||++.+++.+
T Consensus 162 ~i~~livdAv~~V~~~-~~~i~v~~I~i~k~~Ggs~~ds~lv~G~~~dk~~~~--~~~~~~n~kI~ll~~~le~~~~e~k 238 (512)
T 3iyg_Q 162 FLAKLIAQACVSIFPD-SGHFNVDNIRVCKILGSGVHSSSVLHGMVFKKETEG--DVTSVKDAKIAVYSCPFDGMITETK 238 (512)
T ss_pred HHHHHHHHHHHHHhcc-CCcccHhHeeEeeccCCCcccceEEeeEEEecCcCC--CCcccccCceEEEeccccccccccc
Confidence 9999999999999753 225788899999999999999999999999999976 9999999999999999999999988
Q ss_pred ceeEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHCCCcEEeecCcccHHHHHHHhCCeecc
Q psy14623 266 HNLDVQSVEDYKELRKYEQEKFASMVDKVKATGATLAICQWGFDDEANHLLLQKQLPAVRWVGGPDIELIAIVTGGRIVP 345 (622)
Q Consensus 266 ~~~~i~~~~~l~~~~~~e~~~i~~~v~~l~~~g~~lVi~~~~I~~~al~~L~~~~I~~i~~v~~~~L~~ia~~tGa~ii~ 345 (622)
+++.+++++++..+.+.|++++++.++++.+.|++|||++++|++.++++|.++||.+++++++.+|+|||++|||++++
T Consensus 239 ~~v~Is~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~la~~~l~k~~I~av~~~~~~dle~ia~~tGa~iis 318 (512)
T 3iyg_Q 239 GTVLIKSAEELMNFSKGEENLMDAQVKAIADTGANVVVTGGRVADMALHYANKYNIMLVRLNSKWDLRRLCKTVGATALP 318 (512)
T ss_pred ceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHCCeEEEEeCCHHHHHHHHHHhCCEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccchhhhhhcccccCcccccccccccCccccchhhhhcCCcccccccccCcccccccccEEEEEeccccceEEEEeccC
Q psy14623 346 RFEELTSEKLGKAGLGNQFWYNQRSHAGHTDIELIAIVTGGRIVPRFEELTSEKLGKAGLVREISFGTTKDHMLVIEECE 425 (622)
Q Consensus 346 ~~~~l~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lG~~~~v~~~~~g~~~~~~~~~~~~~ 425 (622)
++++ ++++++|+|+.|++..+| ++++++|++|+
T Consensus 319 ~l~~---------------------------------------------~~~~~LG~a~~v~~~~~g--~~~~~~~~~~~ 351 (512)
T 3iyg_Q 319 RLNP---------------------------------------------PVLEEMGHCDSVYLSEVG--DTQVVVFKHEK 351 (512)
T ss_pred cccc---------------------------------------------CCHHHCCcccEEEEEEeC--CeEEEEEEccc
Confidence 8877 777899999999999999 78999999997
Q ss_pred -CCceEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHhcCccccCCChhhhhHHHHHHHhhccccchhHHHHHHHHHHHHH
Q psy14623 426 -NSKAVTIFIRGGNKMIIEEAKRSIHDALCVVRNLVTENRVVYGGGAAEVSCAIAVAAEADKISSIEQYAFRAFADALES 504 (622)
Q Consensus 426 -~~~~~TIll~G~t~~~l~E~~~~l~dal~~~~~~l~~g~vvpGGGa~E~~ls~~L~~~~~~~~~~~~~~~~~~a~AL~~ 504 (622)
.++.|||+|||+|+.+++|.||+++|||+++|+++++|++|||||++|++++.+|++++.++++++|+++++|++||+.
T Consensus 352 ~~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ 431 (512)
T 3iyg_Q 352 EDGAISTIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGGATEIELAKQITSYGETCPGLEQYAIKKFAEAFEA 431 (512)
T ss_pred CCCceEEEEECCCcHHHHHHHHHHHHHHHHHHHHHHhCCCEecCCcHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999999999999999999999999999999999988999999999999999999
Q ss_pred HHHHHHhhcCCChHHHHHHHHHHhhhcCCCceEEEccCC--cccccccCCcccchHHHHHHHHHHHHHHHHHHhhhheec
Q psy14623 505 IPLALAENSGLSPIETLTEVKSRQVKEVNPALGIDCMLN--GTNDMKQQNVIEALRSKKQQILLSTQLVKMILKIDDIRS 582 (622)
Q Consensus 505 ip~~L~~NaG~d~~~il~~L~~~~~~~~~~~~Gid~~~g--~~~d~~~~gI~dp~~vk~~~L~~A~e~a~~lL~iD~iI~ 582 (622)
||++|++|||+|+.+++++|++.|.. ++.++|||+.+| ++.||++.|||||+.||+++|+.|+|+|++|||+|++|.
T Consensus 432 ip~~La~NaG~d~~~~v~~l~~~h~~-~~~~~G~d~~~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~id~ii~ 510 (512)
T 3iyg_Q 432 IPRALAENSGVKANEVISKLYAVHQE-GNKNVGLDIEAEVPAVKDMLEAGVLDTYLGKYWAIKLATNAAVTVLRVDQIIM 510 (512)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHhc-CCCcEEEecCCCCCcccchHhccCeEcHHHHHHHHHHHHHHHHHHHhHhHhee
Confidence 99999999999999999999999874 457899999965 999999999999999999999999999999999999997
Q ss_pred C
Q psy14623 583 P 583 (622)
Q Consensus 583 ~ 583 (622)
+
T Consensus 511 ~ 511 (512)
T 3iyg_Q 511 A 511 (512)
T ss_pred c
Confidence 5
No 20
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=100.00 E-value=9.1e-107 Score=904.40 Aligned_cols=519 Identities=32% Similarity=0.549 Sum_probs=483.0
Q ss_pred CCceeeeccchhhhhcccHHHHHHHHHHHHHHHHHhccccCccccceeeecCCCCeEEeccHHHHhhhcccCChhHHHHH
Q psy14623 15 GRPFIILRNQQEQKRIIGNDAIKSHIVAAKNIANTLKTSLGPKGLDKMMVSSDGDVTVTNDGATILKLMDVDHEIAKLMV 94 (622)
Q Consensus 15 ~~~~~~~~~~~~~~~~~g~~~~~~~~~a~~~la~~v~tslGP~G~~kmi~~~~g~~~ITnDG~tIl~~l~~~hP~akll~ 94 (622)
+.|+++++++. ++.+|.+++..|+.||+.|+++|+|||||+||+|||+++.|+++|||||+|||++|+++||+|+|++
T Consensus 2 ~~~~~~~~~~~--~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~~~hP~Akll~ 79 (590)
T 3p9d_C 2 QAPVVFMNASQ--ERTTGRQAQISNITAAKAVADVIRTCLGPKAMLKMLLDPMGGLVLTNDGHAILREIDVAHPAAKSML 79 (590)
T ss_dssp ----CCSCTTC--CBCTTHHHHHTTHHHHHHHHHHSTTTCSSSCCCCEEECTTTCCBCCCCHHHHHHHSCCCCHHHHTHH
T ss_pred CCCeEeecCCc--chhhHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEECCHHHHHHHhhCCCHHHHHHH
Confidence 45888888874 6689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhccccccCchhhHHHHHHHHHHHHHHH-HhcCCChHHHHHHHHHHHHHHHHHHhccccccCCCCCChHHHHHHHHH
Q psy14623 95 QLSQSQDDEIGDGTTGVVVLAGALLEQAEHL-LDKGIHPIRIADGFELAAQCAVKHLETIADSFPVNPDNLEPLIKTAMT 173 (622)
Q Consensus 95 ~~a~~~~~~~GDGTtt~vlLa~~Ll~~a~~l-i~~gi~p~~Ii~g~~~a~~~~l~~L~~~s~~i~~~~~~~~~L~~va~t 173 (622)
++|++||+++||||||+++||++||+++.++ +.+|+||+.|++||++|++.++++|++++++++ ..+++.|.++|+|
T Consensus 80 e~a~~qd~e~GDGTTtvvVLA~eLL~~a~~l~l~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~--~~~~e~L~~vA~t 157 (590)
T 3p9d_C 80 ELSRTQDEEVGDGTTTVIILAGEILAQCAPYLIEKNIHPVIIIQALKKALTDALEVIKQVSKPVD--VENDAAMKKLIQA 157 (590)
T ss_dssp HHTTTHHHHCSSCHHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHCCTTT--TCCTHHHHHHHTT
T ss_pred HHHHhhhhhhCCCccchHHHHHHHHhhhHHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHhhccc--cCCHHHHHHHHHH
Confidence 9999999999999999999999999999999 999999999999999999999999999976654 3467899999999
Q ss_pred hhcCccchhhHHHHHHHHHHHHHHhcccccC--------CCCcc-cEEEEEccCCCccceeEEeeEEEeecCCCCCCCcc
Q psy14623 174 TLGSKIINKCHRQMAEIAVNAVMAVADLEKR--------DVNFE-LIKVEGKVGGKLEDTMLVKGVVIDKDFSHPQMPKE 244 (622)
Q Consensus 174 sl~sk~~~~~~~~la~lv~~Av~~v~~~~~~--------~~~~~-~I~I~~~~G~~~~dS~li~Giv~~~~~~~~~~~~~ 244 (622)
++++|+.++++++|++++++|+..+++.... .+|++ +|+|++++|+++.||++++|++|++++.++.||+.
T Consensus 158 slsSK~~~~~~~~i~~livdAv~~V~~~~~~~~~~~~~~~vDl~~~I~I~ki~Ggs~~ds~lv~Gmvfdk~~~~~~m~~~ 237 (590)
T 3p9d_C 158 SIGTKYVIHWSEKMCELALDAVKTVRKDLGQTVEGEPNFEIDIKRYVRVEKIPGGDVLDSRVLKGVLLNKDVVHPKMSRH 237 (590)
T ss_dssp TSTTSTTGGGHHHHHHHHHHHHTTSTTCC-----------CCCSSSSCEEEESSCCGGGCBCCSSEEECCCCSCTTSCSC
T ss_pred HHhcccccccHHHHHHHHHHHHHHhcccccCccccccccccchhhceEEEEecCCCcccceeeeEEEEecccCCCCCcce
Confidence 9999999999999999999999999753211 34544 69999999999999999999999999999999999
Q ss_pred cccceEEEecCCCCCCCCCCCceeEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHCCCcEE
Q psy14623 245 LRDVKLAILTCPFEPPRPKTKHNLDVQSVEDYKELRKYEQEKFASMVDKVKATGATLAICQWGFDDEANHLLLQKQLPAV 324 (622)
Q Consensus 245 ~~n~ki~ll~~~l~~~~~~~~~~~~i~~~~~l~~~~~~e~~~i~~~v~~l~~~g~~lVi~~~~I~~~al~~L~~~~I~~i 324 (622)
++||||++++++|++++++.++++.++++++++.+.+.|++++++.++++.+.|++|||++++|++.+++||.++||+++
T Consensus 238 ~en~kIll~d~~Le~~K~e~~~~v~Is~~~~l~~il~~E~~~l~~~vekI~~~g~~vII~e~~I~d~Al~~L~k~~I~av 317 (590)
T 3p9d_C 238 IENPRVVLLDCPLEYKKGESQTNIEIEKEEDWNRILQIEEEQVQLMCEQILAVRPTLVITEKGVSDLAQHYLLKGGCSVL 317 (590)
T ss_dssp EESCCEECCCCCCSCCCCTTTEECCBCSTTHHHHHHHHHHHHHHHHHHHHHTTCCSEECCSSCCCTHHHHHHHHTTCCCC
T ss_pred eeeeEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEecCCcCHHHHHHHHhccceee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecCcccHHHHHHHhCCeeccCccchhhhhhcccccCcccccccccccCccccchhhhhcCCcccccccccCcccccc-c
Q psy14623 325 RWVGGPDIELIAIVTGGRIVPRFEELTSEKLGKAGLGNQFWYNQRSHAGHTDIELIAIVTGGRIVPRFEELTSEKLGK-A 403 (622)
Q Consensus 325 ~~v~~~~L~~ia~~tGa~ii~~~~~l~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lG~-~ 403 (622)
+++++.+|+|||++|||++++++++ ++++.+|+ |
T Consensus 318 ~~~~k~~le~ia~~TGa~iis~l~~---------------------------------------------~~~~~LG~~a 352 (590)
T 3p9d_C 318 RRVKKSDNNRIARVTGATIVNRVED---------------------------------------------LKESDVGTNC 352 (590)
T ss_dssp CCCCHHHHHHHHHHHTCCCCSCSTT---------------------------------------------CCTTSCBCCC
T ss_pred ccCCHHHHHHHHHHhCCceeecccC---------------------------------------------CCHHHhCCcC
Confidence 9999999999999999999998877 77788999 9
Q ss_pred ccEEEEEeccccceEEEEeccCCCce------------------------------------------------------
Q psy14623 404 GLVREISFGTTKDHMLVIEECENSKA------------------------------------------------------ 429 (622)
Q Consensus 404 ~~v~~~~~g~~~~~~~~~~~~~~~~~------------------------------------------------------ 429 (622)
+.|++..+| +++++||++|++++.
T Consensus 353 ~~v~~~~ig--~d~~~~i~g~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~i~~r~~~i~~~~~~~~~~~~~~~~~l~g 430 (590)
T 3p9d_C 353 GLFKVEMIG--DEYFSFLDNCKEPGSGSGWSHPQFEKGSGKRRWKKNFIAVSAANRFKKISSSGALGSGHHHHHHHHGSG 430 (590)
T ss_dssp SEEECCEET--TEECEEECC---------------------------------------------------------CCC
T ss_pred CEEEEEEEc--CcEEEEEeCCCCccccccccccccccccchhhhhcchhhHHHHHHHHHHHHHHhccCCHHHHHHHhhcC
Confidence 999998898 789999999987666
Q ss_pred --EEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHhcCccccCCChhhhhHHHHHHHhhccccchhHHHHHHHHHHHHHHHH
Q psy14623 430 --VTIFIRGGNKMIIEEAKRSIHDALCVVRNLVTENRVVYGGGAAEVSCAIAVAAEADKISSIEQYAFRAFADALESIPL 507 (622)
Q Consensus 430 --~TIll~G~t~~~l~E~~~~l~dal~~~~~~l~~g~vvpGGGa~E~~ls~~L~~~~~~~~~~~~~~~~~~a~AL~~ip~ 507 (622)
|||+|||+|+.+++|.||+++|||+++|+++++|++|||||++|++|+.+|++++.++++++|+++++|++||+.||+
T Consensus 431 gv~tI~lrg~te~~l~E~kr~i~DAl~a~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~ 510 (590)
T 3p9d_C 431 KACTIMLRGGSKDILNEIDRNLQDAMAVARNVMLSPSLSPGGGATEMAVSVKLAEKAKQLEGIQQWPYQAVADAMECIPR 510 (590)
T ss_dssp SCCCEEEECSSTTTHHHHHHHHHHHHHHHHHHHHCCCEECTTTHHHHHHHHHHHHHHHHSCSTTHHHHHHHHHHTTHHHH
T ss_pred CeeEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCEEeCccHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999889999999999999999999988999999999999999999999
Q ss_pred HHHhhcCCChHHHHHHHHHHhhhcCCCceEEEccCCcccccccCCcccchHHHHHHHHHHHHHHHHHHhhhheecCCC
Q psy14623 508 ALAENSGLSPIETLTEVKSRQVKEVNPALGIDCMLNGTNDMKQQNVIEALRSKKQQILLSTQLVKMILKIDDIRSPND 585 (622)
Q Consensus 508 ~L~~NaG~d~~~il~~L~~~~~~~~~~~~Gid~~~g~~~d~~~~gI~dp~~vk~~~L~~A~e~a~~lL~iD~iI~~~~ 585 (622)
+|++|||+|+.+++++|++.|.. ++.++|||+.+|++.||++.|||||+.||+++|+.|+|+|++|||+|++|...+
T Consensus 511 ~La~NaG~d~~~vv~~l~~~h~~-~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~ii~~~~ 587 (590)
T 3p9d_C 511 TLIQNAGGDPIRLLSQLRAKHAQ-GNFTTGIDGDKGKIVDMVSYGIWEPEVIKQQSVKTAIESACLLLRVDDIVSGVR 587 (590)
T ss_dssp HHHHTTCSCHHHHHHHHHHHHTT-SCTTCBCCTTSSSCBCTTTTTCCEEHHHHHHHHHHHHHHHHHTTSEEEEECCCC
T ss_pred HHHHHcCCCHHHHHHHHHHHHhc-CCCCEeEeCCCCeEeehHHcCCeEcHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999874 457899999999999999999999999999999999999999999999998664
No 21
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=100.00 E-value=2.5e-106 Score=897.44 Aligned_cols=512 Identities=33% Similarity=0.516 Sum_probs=481.6
Q ss_pred eeccchhhhhcccHHHHHHHHHHHHHHHHHhccccCccccceeeec-CCCCeEEeccHHHHhhhcccCChhHHHHHHHHh
Q psy14623 20 ILRNQQEQKRIIGNDAIKSHIVAAKNIANTLKTSLGPKGLDKMMVS-SDGDVTVTNDGATILKLMDVDHEIAKLMVQLSQ 98 (622)
Q Consensus 20 ~~~~~~~~~~~~g~~~~~~~~~a~~~la~~v~tslGP~G~~kmi~~-~~g~~~ITnDG~tIl~~l~~~hP~akll~~~a~ 98 (622)
+++++ +++.+|.+++.+|+.||+.|+++|||||||+||+|||++ +.|+++|||||+|||++|+++||+|+|++++|+
T Consensus 5 ~l~~~--~~~~~g~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~~G~~~iTnDG~tIlk~i~~~hP~Akll~e~a~ 82 (527)
T 3p9d_B 5 IFGDQ--VTEERAENARLSAFVGAIAVGDLVKSTLGPKGMDKLLQSASSNTCMVTNDGATILKSIPLDNPAAKVLVNISK 82 (527)
T ss_dssp SSCSC--EEEEESHHHHHHHHHHHHHHHHHHHSCSSSSCCEEEEECTTTCCEECCCCHHHHHHTCCCCCHHHHHHHHHHH
T ss_pred hhcCc--chhhhhHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEecCCCCeEEeCCHHHHHHHhccCCHHHHHHHHHHH
Confidence 45555 467899999999999999999999999999999999999 899999999999999999999999999999999
Q ss_pred hccccccCchhhHHHHHHHHHHHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHhccccccCCCC-CChHHHHHHHHHhhc
Q psy14623 99 SQDDEIGDGTTGVVVLAGALLEQAEHLLDK-GIHPIRIADGFELAAQCAVKHLETIADSFPVNP-DNLEPLIKTAMTTLG 176 (622)
Q Consensus 99 ~~~~~~GDGTtt~vlLa~~Ll~~a~~li~~-gi~p~~Ii~g~~~a~~~~l~~L~~~s~~i~~~~-~~~~~L~~va~tsl~ 176 (622)
+||+++||||||+++||++||+++.+++.+ |+||+.|++||++|++.++++|+++++++..+. .+++.|.++|+||++
T Consensus 83 ~qd~~~GDGTTtavVLA~~Ll~ea~~lv~~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~l~~vA~tSl~ 162 (527)
T 3p9d_B 83 VQDDEVGDGTTSVTVLSAELLREAEKLIDQSKIHPQTIIEGYRLASAAALDALTKAAVDNSHDKTMFREDLIHIAKTTLS 162 (527)
T ss_dssp HHHHHTCSCTTTTTHHHHHHHHHHHHHTC---CCHHHHHHHHHHHHHHHHHHHHHTCBCCCCCHHHHHHHHHHHHHHHHT
T ss_pred HhHhhhCCcHhHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhCccCCCcchhhHHHHHHHHHhccc
Confidence 999999999999999999999999999999 999999999999999999999999976654210 117899999999999
Q ss_pred CccchhhHHHHHHHHHHHHHHhcccccCCCCcccEEEEEccCCCccceeEEeeEEEeecCCCCCCCcccccceEEEecCC
Q psy14623 177 SKIINKCHRQMAEIAVNAVMAVADLEKRDVNFELIKVEGKVGGKLEDTMLVKGVVIDKDFSHPQMPKELRDVKLAILTCP 256 (622)
Q Consensus 177 sk~~~~~~~~la~lv~~Av~~v~~~~~~~~~~~~I~I~~~~G~~~~dS~li~Giv~~~~~~~~~~~~~~~n~ki~ll~~~ 256 (622)
||+.++++++|+++++||+.++++. .|++.|+|+++.|+++.||++++|++|+++|.+|+ |++++|+||++++++
T Consensus 163 sK~~~~~~~~i~~li~dAv~~V~~~----~~~~~I~V~k~~gg~~~ds~lv~G~~~dk~~~~~~-p~~~~n~kIlll~~~ 237 (527)
T 3p9d_B 163 SKILSQDKDHFAELATNAILRLKGS----TNLEHIQIIKILGGKLSDSFLDEGFILAKKFGNNQ-PKRIENAKILIANTT 237 (527)
T ss_dssp TSGGGGGHHHHHHHHHHHHHTTCTT----CCTTSSCCCBCCCSSSSCCCEESSCCCSCCCSSSC-CSCCSSCEEEEECSC
T ss_pred cCcccchHHHHHHHHHHHHHHhccc----CCcceEEEEEcCCCCccccEEEEeEEEecccCCCC-CeeeecceEEEeccc
Confidence 9999999999999999999999742 25677999999999999999999999999999998 899999999999999
Q ss_pred CCCCCCC-CCceeEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHCCCcEEeecCcccHHHH
Q psy14623 257 FEPPRPK-TKHNLDVQSVEDYKELRKYEQEKFASMVDKVKATGATLAICQWGFDDEANHLLLQKQLPAVRWVGGPDIELI 335 (622)
Q Consensus 257 l~~~~~~-~~~~~~i~~~~~l~~~~~~e~~~i~~~v~~l~~~g~~lVi~~~~I~~~al~~L~~~~I~~i~~v~~~~L~~i 335 (622)
|++++++ ++.++.+++++++..+.+.|++++++.++++.+.|++|||++++|++.+++||.+++|.+++++++.+|+|+
T Consensus 238 le~~k~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~l~~I~~~g~~vvi~~~~I~~~al~~L~~~~i~av~~~~~~dle~i 317 (527)
T 3p9d_B 238 LDTDKVKIFGTKFKVDSTAKLAQLEKAEREKMKNKIAKISKFGINTFINRQLIYDYPEQLFTDLGINSIEHADFEGVERL 317 (527)
T ss_dssp SSCCCCSSCCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHTTTCCBEEESSCCCTTTHHHHHHHTCBCCCCCCHHHHHHHH
T ss_pred cccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHCCCEEEecCCHHHHHHH
Confidence 9999998 588888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCCeeccCccchhhhhhcccccCcccccccccccCccccchhhhhcCCcccccccccCcccccccccEEEEEecccc
Q psy14623 336 AIVTGGRIVPRFEELTSEKLGKAGLGNQFWYNQRSHAGHTDIELIAIVTGGRIVPRFEELTSEKLGKAGLVREISFGTTK 415 (622)
Q Consensus 336 a~~tGa~ii~~~~~l~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lG~~~~v~~~~~g~~~ 415 (622)
|++|||++++++++ ++++.+|+|+.|+++.+| +
T Consensus 318 a~~tGa~iv~~~~~---------------------------------------------~~~~~LG~a~~v~~~~ig--~ 350 (527)
T 3p9d_B 318 ALVTGGEVVSTFDE---------------------------------------------PSKCKLGECDVIEEIMLG--E 350 (527)
T ss_dssp HHHTCCCCCSTTSC---------------------------------------------CTTSCEECSBCCBCCCSS--S
T ss_pred HHHhCCEEecchhh---------------------------------------------CCHHHCCCCcEEEEEEec--c
Confidence 99999999999877 777889999999999998 7
Q ss_pred ceEEEEeccCCCceEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHHhcCccccCCChhhhhHHHHHHHhhccccchhHHHH
Q psy14623 416 DHMLVIEECENSKAVTIFIRGGNKMIIEEAKRSIHDALCVVRNLVTENRVVYGGGAAEVSCAIAVAAEADKISSIEQYAF 495 (622)
Q Consensus 416 ~~~~~~~~~~~~~~~TIll~G~t~~~l~E~~~~l~dal~~~~~~l~~g~vvpGGGa~E~~ls~~L~~~~~~~~~~~~~~~ 495 (622)
+++++|++|+++++|||+|||+|+.+++|.||+++|||+++|+++++|++|||||++|++|+.+|++++.++++++|+++
T Consensus 351 ~~~~~~~g~~~~~~~tI~lrg~te~~l~E~kr~i~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i 430 (527)
T 3p9d_B 351 QPFLKFSGCKAGEACTIVLRGATDQTLDEAERSLHDALSVLSQTTKETRTVLGGGCAEMVMSKAVDTEAQNIDGKKSLAV 430 (527)
T ss_dssp CCBCCBCSSCCSCCEECBCCTTCTTHHHHHHTHHHHHHHHHHHHHHCCCEEETTTHHHHHHHHHHHHHHHHHCSHHHHHH
T ss_pred eEEEEEECCCCCCEEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCcHHHHHHHHHHHHHHhccCcHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999988899999999
Q ss_pred HHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHhhhcCCCceEEEccCCcccccccCCcccchHHHHHHHHHHHHHHHHHH
Q psy14623 496 RAFADALESIPLALAENSGLSPIETLTEVKSRQVKEVNPALGIDCMLNGTNDMKQQNVIEALRSKKQQILLSTQLVKMIL 575 (622)
Q Consensus 496 ~~~a~AL~~ip~~L~~NaG~d~~~il~~L~~~~~~~~~~~~Gid~~~g~~~d~~~~gI~dp~~vk~~~L~~A~e~a~~lL 575 (622)
++|++||+.||++|++|||+|+.+++++|++.|.. ++.++|||+.+|++.||++.|||||+.||+++|+.|+|+|++||
T Consensus 431 ~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~-~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL 509 (527)
T 3p9d_B 431 EAFARALRQLPTILADNAGFDSSELVSKLRSSIYN-GISTSGLDLNNGTIADMRQLGIVESYKLKRAVVSSASEAAEVLL 509 (527)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCSHHHHHHHHHHHHH-TCSCCCCCSSSTTCCCHHHHTCEEETTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhc-CCCceeEECCCCCCcchHhccCEEcHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999875 45679999999999999999999999999999999999999999
Q ss_pred hhhheecCCCC
Q psy14623 576 KIDDIRSPNDG 586 (622)
Q Consensus 576 ~iD~iI~~~~~ 586 (622)
|+|++|...+.
T Consensus 510 ~id~ii~~~~~ 520 (527)
T 3p9d_B 510 RVDNIIRARPR 520 (527)
T ss_dssp HCCEEEEEC--
T ss_pred hHHHHHhcCCc
Confidence 99999987644
No 22
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=100.00 E-value=5.3e-101 Score=848.83 Aligned_cols=489 Identities=37% Similarity=0.597 Sum_probs=381.6
Q ss_pred eeecCCCCeEEeccHHHHhhhcccCChhHHHHHHHHhhccccccCchhhHHHHHHHHHHHHHHHHhcCCChHHHHHHHHH
Q psy14623 62 MMVSSDGDVTVTNDGATILKLMDVDHEIAKLMVQLSQSQDDEIGDGTTGVVVLAGALLEQAEHLLDKGIHPIRIADGFEL 141 (622)
Q Consensus 62 mi~~~~g~~~ITnDG~tIl~~l~~~hP~akll~~~a~~~~~~~GDGTtt~vlLa~~Ll~~a~~li~~gi~p~~Ii~g~~~ 141 (622)
||+++.|+++|||||+|||++|+++||+|+|++++|++||+++||||||+++||++||+++.+++++|+||+.|++||++
T Consensus 1 mlv~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvvLa~~LL~~a~~ll~~GihP~~I~~G~~~ 80 (500)
T 3aq1_B 1 MLVDSMGDIVITNDGATILKEMDIQHPAAKMIVEVSKTQDAEVGDGTTTAAVLSGELLSKAEELIMKGVHSTIISEGYRH 80 (500)
T ss_dssp ------------------------------------------CCHHHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHH
T ss_pred CccCCCCCeEEECcHHHHHHhCcCCCHHHHHHHHHHHhhhhhhCCChHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccccccCCCCCChHHHHHHHHHhhcCccchhhHHHHHHHHHHHHHHhccc--ccCCCC-cccEEEEEccC
Q psy14623 142 AAQCAVKHLETIADSFPVNPDNLEPLIKTAMTTLGSKIINKCHRQMAEIAVNAVMAVADL--EKRDVN-FELIKVEGKVG 218 (622)
Q Consensus 142 a~~~~l~~L~~~s~~i~~~~~~~~~L~~va~tsl~sk~~~~~~~~la~lv~~Av~~v~~~--~~~~~~-~~~I~I~~~~G 218 (622)
|++.++++|++++++++ ..+++.|.++|+|+++||+.++++++|++++++|+.++++. ....+| +++|+|++++|
T Consensus 81 A~~~a~~~L~~~s~~v~--~~d~~~l~~va~tsl~sKi~~~~~~~i~~li~dAv~~v~~~~~g~~~~di~~~I~V~k~~G 158 (500)
T 3aq1_B 81 AAEKCREILETITIAIS--PDDEAALIKIAGTAITGKGAEAYKEKLSALTVKAVRSIVEEEEDGLKVNVLENIKIEKRAG 158 (500)
T ss_dssp HHHHHHHHHHHHCEECC--TTCHHHHHHHHHTTCCSSSTTSSHHHHHHHHHHHHTTSEECCSSSCEECHHHHEEEEEEES
T ss_pred HHHHHHHHHHHhcCCCC--CCcHHHHHHHHHHHhhcccccccHHHHHHHHHHHHHHhcccccCCccccccccEEEEEecC
Confidence 99999999999987653 34689999999999999999999999999999999999754 222466 77899999999
Q ss_pred CCccceeEEeeEEEeecCCCCCCCcccccceEEEecCCCCCCCCCCCceeEecCHHHHHHHHHHHHHHHHHHHHHHHhcC
Q psy14623 219 GKLEDTMLVKGVVIDKDFSHPQMPKELRDVKLAILTCPFEPPRPKTKHNLDVQSVEDYKELRKYEQEKFASMVDKVKATG 298 (622)
Q Consensus 219 ~~~~dS~li~Giv~~~~~~~~~~~~~~~n~ki~ll~~~l~~~~~~~~~~~~i~~~~~l~~~~~~e~~~i~~~v~~l~~~g 298 (622)
++++||++++|++|+++|.||+||+.++||||++++++|++++++.++++.++++++++.+.++|+++++++++++.+.|
T Consensus 159 ~~~~ds~lv~G~v~dk~~~~~~m~~~i~n~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g 238 (500)
T 3aq1_B 159 GSIDDSELIDGLVIDKERSHPNMPEKVENAKILLLSCPVEFRKTEVDSEIKITSPGQMQLFLDQEEKMMREMAEKVIASG 238 (500)
T ss_dssp SCGGGCEEESEEEESCCCSSTTSCSEEEEEEEEEESSCBCC-------------------------CHHHHHHHHHHTTC
T ss_pred CCccceEEEeeeEEeecCCCCCCcccccCCEEEEEeCCccccccccceeEeeCCHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEecCCCHHHHHHHHHCCCcEEeecCcccHHHHHHHhCCeeccCccchhhhhhcccccCcccccccccccCccccc
Q psy14623 299 ATLAICQWGFDDEANHLLLQKQLPAVRWVGGPDIELIAIVTGGRIVPRFEELTSEKLGKAGLGNQFWYNQRSHAGHTDIE 378 (622)
Q Consensus 299 ~~lVi~~~~I~~~al~~L~~~~I~~i~~v~~~~L~~ia~~tGa~ii~~~~~l~~~~lg~~~~~~~~~~~~~~~~~~~~~~ 378 (622)
++|||++++|++.|++||.++||.+++++++++|+|||++|||++++++++
T Consensus 239 ~~lvi~~~~I~~~al~~L~~~~I~av~~~~k~~le~ia~~tGa~iis~l~~----------------------------- 289 (500)
T 3aq1_B 239 ANVVFCQKGIDDMAQYYIEKAGIYAVRRVKKSDLKRLSKVTGATIIQDLDQ----------------------------- 289 (500)
T ss_dssp CSEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHCCCCBSCTTC-----------------------------
T ss_pred cCEEEECCCcCHHHHHHHHHCCEEEEEeCCHHHHHHHHHHhCCeEeccccc-----------------------------
Confidence 999999999999999999999999999999999999999999999998877
Q ss_pred hhhhhcCCcccccccccCcccccccccEEEEEeccccceEEEEeccCCCceEEEEEeCCCHHHHHHHHHHHHHHHHHHHH
Q psy14623 379 LIAIVTGGRIVPRFEELTSEKLGKAGLVREISFGTTKDHMLVIEECENSKAVTIFIRGGNKMIIEEAKRSIHDALCVVRN 458 (622)
Q Consensus 379 ~~~~~~~~~~~~~~~~l~~~~lG~~~~v~~~~~g~~~~~~~~~~~~~~~~~~TIll~G~t~~~l~E~~~~l~dal~~~~~ 458 (622)
++++.+|+|+.|++..+| +++|+||++|++++.|||+|||+|+.+++|.||+++|||+++|+
T Consensus 290 ----------------~~~~~LG~a~~v~~~~ig--~~~~~~~~g~~~~~~~TI~lrG~t~~~l~E~er~l~Dal~~~r~ 351 (500)
T 3aq1_B 290 ----------------ITTEDVGTAGLVEEKEVR--GGKMTYVTGCQNSKAVTVLLHGGTEHVVDSLDHALNDALHVVGV 351 (500)
T ss_dssp ----------------CCSTTCEEEEEEEEEECS--SSEEEEEEEETTCCCEEEEEEESSHHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------CCHhHCCCceEEEEEEec--CeEEEEEECCCCCceEEEEecCCcHHHHHHHHHHHHHHHHHHHH
Confidence 778889999999999998 78999999999999999999999999999999999999999999
Q ss_pred HHhcCccccCCChhhhhHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHhhhcCCCceEE
Q psy14623 459 LVTENRVVYGGGAAEVSCAIAVAAEADKISSIEQYAFRAFADALESIPLALAENSGLSPIETLTEVKSRQVKEVNPALGI 538 (622)
Q Consensus 459 ~l~~g~vvpGGGa~E~~ls~~L~~~~~~~~~~~~~~~~~~a~AL~~ip~~L~~NaG~d~~~il~~L~~~~~~~~~~~~Gi 538 (622)
++++|++|||||++|++|+.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++++|++.|.. +..++||
T Consensus 352 ~~~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~-~~~~~G~ 430 (500)
T 3aq1_B 352 VIEDGKVVVGGGSSEVELSLRLSEYASTLKGREQLAVSKFAEALEVIPVALAENAGLDPIDIMVELRSQHEK-GNKNAGL 430 (500)
T ss_dssp HHHHSEEEETTTHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHTTHHHHHHHHHTTCCHHHHHHHHHHHHHT-TCTTEEE
T ss_pred HHHCCCCCCCCcHHHHHHHHHHHHHhhhcCchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhcC-CCCCeeE
Confidence 999999999999999999999999998889999999999999999999999999999999999999998864 4568999
Q ss_pred EccCCcccccccCCcccchHHHHHHHHHHHHHHHHHHhhhheecCCCCCCchhhhhhhccCCcccc
Q psy14623 539 DCMLNGTNDMKQQNVIEALRSKKQQILLSTQLVKMILKIDDIRSPNDGICDEEMAAAWTSSMEVTA 604 (622)
Q Consensus 539 d~~~g~~~d~~~~gI~dp~~vk~~~L~~A~e~a~~lL~iD~iI~~~~~~~~~~~~~~~~~~~~~~~ 604 (622)
|+.+|++.||++.|||||+.||+++|+.|+|+|++|||+|++|...+..+ ++| + -++|++|+
T Consensus 431 d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~~~~-~~~-~--~g~~~~~~ 492 (500)
T 3aq1_B 431 NVYTGEVVDMWENDVIEPLRIKTQAINAAMEATVMILRIDDVVASKGSAN-QGM-G--PGGLPDMP 492 (500)
T ss_dssp CTTTCCEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHCC---------------------------
T ss_pred eCCCCCccchHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCC-CCC-C--CCCCCCCC
Confidence 99999999999999999999999999999999999999999998865432 222 1 35566653
No 23
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=100.00 E-value=1.3e-93 Score=794.00 Aligned_cols=469 Identities=23% Similarity=0.342 Sum_probs=427.0
Q ss_pred hhhcccHHHHHHHHHHHHHHHHHhccccCccccceeeecCCCCeEEeccHHHHhhhcccCCh----hHHHHHHHHhhccc
Q psy14623 27 QKRIIGNDAIKSHIVAAKNIANTLKTSLGPKGLDKMMVSSDGDVTVTNDGATILKLMDVDHE----IAKLMVQLSQSQDD 102 (622)
Q Consensus 27 ~~~~~g~~~~~~~~~a~~~la~~v~tslGP~G~~kmi~~~~g~~~ITnDG~tIl~~l~~~hP----~akll~~~a~~~~~ 102 (622)
+...+|.++|.+|+.||+.|+++|+|||||+||+|||+++.|+++|||||+|||++|+++|| +|+|++++|++||+
T Consensus 3 k~~~~g~~ar~~~~~~~~~la~~vkttLGPkG~~kmi~~~~g~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~~qd~ 82 (543)
T 1we3_A 3 KILVFDEAARRALERGVNAVANAVKVTLGPRGRNVVLEKKFGSPTITKDGVTVAKEVELEDHLENIGAQLLKEVASKTND 82 (543)
T ss_dssp EEEEEHHHHHHHHHHHHHHHHHHHGGGCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEEcCHHHHHHHcccCChHHhHHHHHHHHHHHhhhe
Confidence 45678999999999999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred cccCchhhHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhccccccCCCCCChHHHHHHHHHhhcCccchh
Q psy14623 103 EIGDGTTGVVVLAGALLEQAEHLLDKGIHPIRIADGFELAAQCAVKHLETIADSFPVNPDNLEPLIKTAMTTLGSKIINK 182 (622)
Q Consensus 103 ~~GDGTtt~vlLa~~Ll~~a~~li~~gi~p~~Ii~g~~~a~~~~l~~L~~~s~~i~~~~~~~~~L~~va~tsl~sk~~~~ 182 (622)
++||||||+++||++||+++.+++++|+||+.|++||++|++.+++.|++++.++. +++.|.++|+++++
T Consensus 83 e~GDGTTtvvVLA~~LL~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~----~~~~l~~vA~iS~~------ 152 (543)
T 1we3_A 83 VAGDGTTTATVLAQAIVREGLKNVAAGANPLALKRGIEKAVEAAVEKIKALAIPVE----DRKAIEEVATISAN------ 152 (543)
T ss_dssp HHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCC----SHHHHHHHHHHHHT------
T ss_pred ecCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCC----CHHHHHHhhhhhcC------
Confidence 99999999999999999999999999999999999999999999999999987653 58899999999886
Q ss_pred hHHHHHHHHHHHHHHhcccccCCCCcccEEEEEccCCCccce-eEEeeEEEeecCCCCCC-------CcccccceEEEec
Q psy14623 183 CHRQMAEIAVNAVMAVADLEKRDVNFELIKVEGKVGGKLEDT-MLVKGVVIDKDFSHPQM-------PKELRDVKLAILT 254 (622)
Q Consensus 183 ~~~~la~lv~~Av~~v~~~~~~~~~~~~I~I~~~~G~~~~dS-~li~Giv~~~~~~~~~~-------~~~~~n~ki~ll~ 254 (622)
+++++++++||+.++++. + .|.|+ .|++++|| ++++|++|+++|.+|+| ++.++||+|++++
T Consensus 153 -~~~i~~li~dAv~~V~~~---g----~I~Ve--~G~~~~ds~~lv~G~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d 222 (543)
T 1we3_A 153 -DPEVGKLIADAMEKVGKE---G----IITVE--ESKSLETELKFVEGYQFDKGYISPYFVTNPETMEAVLEDAFILIVE 222 (543)
T ss_dssp -CHHHHHHHHHHHHTTCTT---S----EEEEE--ECSSSSCEEEEECSEEESCCBSSGGGCSBTTTTBCCEEEEEEEEES
T ss_pred -CHHHHHHHHHHHHHhCcC---C----cEEEe--cCCccccceEEEcCEEEecCccccccccCcccCceeecCceEEEEC
Confidence 488999999999998632 2 27776 79999998 99999999999999986 3347899999999
Q ss_pred CCCCCCCCCCCceeEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHCC------CcEEe---
Q psy14623 255 CPFEPPRPKTKHNLDVQSVEDYKELRKYEQEKFASMVDKVKATGATLAICQWGFDDEANHLLLQKQ------LPAVR--- 325 (622)
Q Consensus 255 ~~l~~~~~~~~~~~~i~~~~~l~~~~~~e~~~i~~~v~~l~~~g~~lVi~~~~I~~~al~~L~~~~------I~~i~--- 325 (622)
++ +++++++ .++++++.+.|++|||++++|+++|+++|..|+ +.+++
T Consensus 223 ~~-------------Is~~~~l-----------~~~le~i~~~g~~lvii~~~I~~~Al~~L~~n~irg~~~v~aVk~~~ 278 (543)
T 1we3_A 223 KK-------------VSNVREL-----------LPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTLSVAAVKAPG 278 (543)
T ss_dssp SC-------------BCCHHHH-----------HHHHHHHHTTTCCEEEEESCBCHHHHHHHHHHHHHTSCCEEEEECSS
T ss_pred CC-------------cCCHHHH-----------HHHHHHHHhcCCCEEEEcCCccHHHHHHHHHhccccceeEEEEeccc
Confidence 85 4566665 689999999999999999999999999999864 45666
Q ss_pred --ecCcccHHHHHHHhCCeeccCccchhhhhhcccccCcccccccccccCccccchhhhhcCCcccccccccCccccccc
Q psy14623 326 --WVGGPDIELIAIVTGGRIVPRFEELTSEKLGKAGLGNQFWYNQRSHAGHTDIELIAIVTGGRIVPRFEELTSEKLGKA 403 (622)
Q Consensus 326 --~v~~~~L~~ia~~tGa~ii~~~~~l~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lG~~ 403 (622)
++++++|+|||++|||+++++...+ ++++++++.+|+|
T Consensus 279 ~~~~~~~~le~ia~~tGa~ii~~~~g~----------------------------------------~l~~~~~~~LG~a 318 (543)
T 1we3_A 279 FGDRRKEMLKDIAAVTGGTVISEELGF----------------------------------------KLENATLSMLGRA 318 (543)
T ss_dssp SHHHHHHHHHHHHHHHCCCCBCTTTTC----------------------------------------CGGGCCGGGCEEE
T ss_pred hhhhhHHHHHHHHHHhCCceeeccccC----------------------------------------CcccCCHHHCCCc
Confidence 7889999999999999999863221 1223888899999
Q ss_pred ccEEEEEeccccceEEEEeccCCC-----------------------------------ceEEEEEeCCCHHHHHHHHHH
Q psy14623 404 GLVREISFGTTKDHMLVIEECENS-----------------------------------KAVTIFIRGGNKMIIEEAKRS 448 (622)
Q Consensus 404 ~~v~~~~~g~~~~~~~~~~~~~~~-----------------------------------~~~TIll~G~t~~~l~E~~~~ 448 (622)
+.|++ .++++++|++|.++ ++|||+|||+|+.+++|.||+
T Consensus 319 ~~v~~-----~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~e~l~erlakl~~~~~tI~lrG~te~~l~E~~r~ 393 (543)
T 1we3_A 319 ERVRI-----TKDETTIVGGKGKKEDIEARINGIKKELETTDSEYAREKLQERLAKLAGGVAVIRVGAATETELKEKKHR 393 (543)
T ss_dssp EEEEE-----CSSCEEEEEECCCHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHTTCEEEEEECCSSHHHHHHHHHH
T ss_pred eEEEE-----EcCEEEEEcCCCCHHHHHHHHHHHHHHhhccCchhHHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHH
Confidence 99986 26899999999753 789999999999999999999
Q ss_pred HHHHHHHHHHHHhcCccccCCChhhhhHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHh
Q psy14623 449 IHDALCVVRNLVTENRVVYGGGAAEVSCAIAVAAEADKISSIEQYAFRAFADALESIPLALAENSGLSPIETLTEVKSRQ 528 (622)
Q Consensus 449 l~dal~~~~~~l~~g~vvpGGGa~E~~ls~~L~~~~~~~~~~~~~~~~~~a~AL~~ip~~L~~NaG~d~~~il~~L~~~~ 528 (622)
++|||+++|+++++| +|||||++|++++.+|++++.+.++++|+++++|++||+.||++|++|||+|+.+++++|++.|
T Consensus 394 i~DAl~~~r~av~~g-iVpGGGa~e~~~s~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h 472 (543)
T 1we3_A 394 FEDALNATRAAVEEG-IVPGGGVTLLRAISAVEELIKKLEGDEATGAKIVRRALEEPARQIAENAGYEGSVIVQQILAET 472 (543)
T ss_dssp HHHHHHHHHHHHHHC-EEETTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHhccC-cCCCccHHHHHHHHHHHHHhhccCchHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHhc
Confidence 999999999999999 9999999999999999999888889999999999999999999999999999999999999887
Q ss_pred hhcCCCceEEEccCCcccccccCCcccchHHHHHHHHHHHHHHHHHHhhhheecCCCCCC
Q psy14623 529 VKEVNPALGIDCMLNGTNDMKQQNVIEALRSKKQQILLSTQLVKMILKIDDIRSPNDGIC 588 (622)
Q Consensus 529 ~~~~~~~~Gid~~~g~~~d~~~~gI~dp~~vk~~~L~~A~e~a~~lL~iD~iI~~~~~~~ 588 (622)
. +.++|||..+|++.||++.|||||+.||+++|+.|+|+|++||++|++|...+...
T Consensus 473 ~---~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~iI~~~~~~~ 529 (543)
T 1we3_A 473 K---NPRYGFNAATGEFVDMVEAGIVDPAKVTRSALQNAASIGALILTTEAVVAEKPEKK 529 (543)
T ss_dssp S---CTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECSCC-
T ss_pred C---CCCEEEeCCCCeecccccCCcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccC
Confidence 3 46899999999999999999999999999999999999999999999999765433
No 24
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=100.00 E-value=6.8e-94 Score=795.18 Aligned_cols=466 Identities=21% Similarity=0.332 Sum_probs=424.9
Q ss_pred hhhcccHHHHHHHHHHHHHHHHHhccccCccccceeeecCCCCeEEeccHHHHhhhcccCCh----hHHHHHHHHhhccc
Q psy14623 27 QKRIIGNDAIKSHIVAAKNIANTLKTSLGPKGLDKMMVSSDGDVTVTNDGATILKLMDVDHE----IAKLMVQLSQSQDD 102 (622)
Q Consensus 27 ~~~~~g~~~~~~~~~a~~~la~~v~tslGP~G~~kmi~~~~g~~~ITnDG~tIl~~l~~~hP----~akll~~~a~~~~~ 102 (622)
|...+|.++|.+|++||+.|+++|+|||||+||+|||+++.|+++|||||+|||++|+++|| +|+|++++|++||+
T Consensus 3 k~~~~g~~ar~~~i~~~~~la~~vkttLGPkG~~kmi~~~~G~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~~qd~ 82 (547)
T 1kp8_A 3 KDVKFGNDAGVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKAND 82 (547)
T ss_dssp EEEEEHHHHHHHHHHHHHHHHHHHHTTCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEEcCHHHHHHHccccChhhhHHHHHHHHHHHhhcc
Confidence 45688999999999999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred cccCchhhHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhccccccCCCCCChHHHHHHHHHhhcCccchh
Q psy14623 103 EIGDGTTGVVVLAGALLEQAEHLLDKGIHPIRIADGFELAAQCAVKHLETIADSFPVNPDNLEPLIKTAMTTLGSKIINK 182 (622)
Q Consensus 103 ~~GDGTtt~vlLa~~Ll~~a~~li~~gi~p~~Ii~g~~~a~~~~l~~L~~~s~~i~~~~~~~~~L~~va~tsl~sk~~~~ 182 (622)
++||||||+++||++||+++.+++++|+||+.|++||++|++.+++.|++++.++. +++.|.++|++++++
T Consensus 83 e~GDGTTtvvVLA~~Ll~ea~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~----~~e~l~~vA~iS~~~----- 153 (547)
T 1kp8_A 83 AAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTVAVEELKALSVPCS----DSKAIAQVGTISANS----- 153 (547)
T ss_dssp HHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCBCCC----SHHHHHHHHHHHTTS-----
T ss_pred ccCCCcchhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCCC----CHHHHHHHHHHhccc-----
Confidence 99999999999999999999999999999999999999999999999999987653 588999999999875
Q ss_pred hHHHHHHHHHHHHHHhcccccCCCCcccEEEEEccCCCccce-eEEeeEEEeecCCCCCCC-------cccccceEEEec
Q psy14623 183 CHRQMAEIAVNAVMAVADLEKRDVNFELIKVEGKVGGKLEDT-MLVKGVVIDKDFSHPQMP-------KELRDVKLAILT 254 (622)
Q Consensus 183 ~~~~la~lv~~Av~~v~~~~~~~~~~~~I~I~~~~G~~~~dS-~li~Giv~~~~~~~~~~~-------~~~~n~ki~ll~ 254 (622)
++++++++++|+.++++. + .|+|+ .|+++++| ++++|++|+++|.+|+|+ +.++||+|++++
T Consensus 154 -~~~i~~liadAv~~V~~d---g----~I~Ve--~G~~~~ds~~lveG~~fdkg~~~p~~vt~~~~m~~~lenp~Ill~d 223 (547)
T 1kp8_A 154 -DETVGKLIAEAMDKVGKE---G----VITVE--DGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLAD 223 (547)
T ss_dssp -CHHHHHHHHHHHHHHCTT---S----EEEEE--CCSSSSCEEEEESCEEESCCBSSTTCCSBTTTTBEEEESCEEECEE
T ss_pred -hhHHHHHHHHHHHHhCcC---C----cEEEE--eCCccccccEEEecEEEecCccccccccCcccCceEecCceEEEEc
Confidence 789999999999999732 2 27776 79999999 999999999999999873 347899999999
Q ss_pred CCCCCCCCCCCceeEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHCCC------cEEe---
Q psy14623 255 CPFEPPRPKTKHNLDVQSVEDYKELRKYEQEKFASMVDKVKATGATLAICQWGFDDEANHLLLQKQL------PAVR--- 325 (622)
Q Consensus 255 ~~l~~~~~~~~~~~~i~~~~~l~~~~~~e~~~i~~~v~~l~~~g~~lVi~~~~I~~~al~~L~~~~I------~~i~--- 325 (622)
++ +++++++ .++++++.+.|++|||++++|+++|+++|..|+| .+++
T Consensus 224 ~~-------------Is~~~~l-----------~~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~ 279 (547)
T 1kp8_A 224 KK-------------ISNIREM-----------LPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPG 279 (547)
T ss_dssp SE-------------ECCGGGT-----------HHHHHHHHGGGCCEEEEESEECHHHHHHHHHHGGGTSSCEEEEECSS
T ss_pred Cc-------------CCCHHHH-----------HHHHHHHHhcCCCEEEECCCcCHHHHHHHHhcccccceeEEEEeccc
Confidence 85 4566666 6889999999999999999999999999999765 4555
Q ss_pred --ecCcccHHHHHHHhCCeeccCccchhhhhhcccccCcccccccccccCccccchhhhhcCCcccccccccCccccccc
Q psy14623 326 --WVGGPDIELIAIVTGGRIVPRFEELTSEKLGKAGLGNQFWYNQRSHAGHTDIELIAIVTGGRIVPRFEELTSEKLGKA 403 (622)
Q Consensus 326 --~v~~~~L~~ia~~tGa~ii~~~~~l~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lG~~ 403 (622)
++++++|+|||++|||+++++...+ ++++++++.+|+|
T Consensus 280 ~~~~rk~~le~ia~~tG~~ii~~~~g~----------------------------------------~l~~~~~~~LG~a 319 (547)
T 1kp8_A 280 FGDRRKAMLQDIATLTGGTVISEEIGM----------------------------------------ELEKATLEDLGQA 319 (547)
T ss_dssp CHHHHHHHHHHHHHHHTCCCEEGGGTC----------------------------------------CSTTCCTTTSEEE
T ss_pred cccccHHHHHHHHHHhCCeEecccccC----------------------------------------CcccCCHHHCCce
Confidence 7889999999999999999862111 1223888899999
Q ss_pred ccEEEEEeccccceEEEEeccCCC-----------------------------------ceEEEEEeCCCHHHHHHHHHH
Q psy14623 404 GLVREISFGTTKDHMLVIEECENS-----------------------------------KAVTIFIRGGNKMIIEEAKRS 448 (622)
Q Consensus 404 ~~v~~~~~g~~~~~~~~~~~~~~~-----------------------------------~~~TIll~G~t~~~l~E~~~~ 448 (622)
+.|++ +++++++|++|.++ ++|||+|||+|+.+++|.||+
T Consensus 320 ~~v~~-----~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~~~~~tI~vrG~te~~l~E~kr~ 394 (547)
T 1kp8_A 320 KRVVI-----NKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKAR 394 (547)
T ss_dssp EEEEE-----CSSCEEEEEECCCHHHHHHHHHHHHHHHHSCCSHHHHHHHHHHHHHHHHCEEEEECCCSSHHHHHHHHHH
T ss_pred eEEEE-----ccceEEEEcCCCCHHHHHHHHHHHHHHhhcccchhhHHHHHHHHHHhcCCeEEEEEcCCcHhHHHHHHHH
Confidence 99987 26899999999864 789999999999999999999
Q ss_pred HHHHHHHHHHHHhcCccccCCChhhhhHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHh
Q psy14623 449 IHDALCVVRNLVTENRVVYGGGAAEVSCAIAVAAEADKISSIEQYAFRAFADALESIPLALAENSGLSPIETLTEVKSRQ 528 (622)
Q Consensus 449 l~dal~~~~~~l~~g~vvpGGGa~E~~ls~~L~~~~~~~~~~~~~~~~~~a~AL~~ip~~L~~NaG~d~~~il~~L~~~~ 528 (622)
++|||+++|+++++| +|||||++|++++.+|++++. .++++|+++++|++||+.||++|++|||+|+.+++++|++.
T Consensus 395 i~DAl~~~r~av~~g-iVpGGGa~e~~~s~~L~~~~~-~~g~~q~~i~~~a~ALe~ip~~la~NaG~d~~~vv~~l~~~- 471 (547)
T 1kp8_A 395 VEDALHATRAAVEEG-VVAGGGVALIRVASKLADLRG-QNADQNVGIKVALRAMEAPLRQIVLNCGEEPSVVANTVKGG- 471 (547)
T ss_dssp HHHHHHHHHHHHHHC-EEETTTHHHHHHHHHTTTCCC-SSHHHHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHHS-
T ss_pred HHHHHHHHHHhccCC-EEeCCcHHHHHHHHHHHHHhc-cCchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhc-
Confidence 999999999999999 999999999999999999876 78899999999999999999999999999999999999853
Q ss_pred hhcCCCceEEEccCCcccccccCCcccchHHHHHHHHHHHHHHHHHHhhhheecCCCCC
Q psy14623 529 VKEVNPALGIDCMLNGTNDMKQQNVIEALRSKKQQILLSTQLVKMILKIDDIRSPNDGI 587 (622)
Q Consensus 529 ~~~~~~~~Gid~~~g~~~d~~~~gI~dp~~vk~~~L~~A~e~a~~lL~iD~iI~~~~~~ 587 (622)
+.++|||..+|++.||++.|||||+.||+++|+.|+|+|++||++|++|...+..
T Consensus 472 ----~~~~G~d~~~g~~~dm~~~gI~Dp~~vk~~al~~A~~~A~~iL~id~iI~~~~~~ 526 (547)
T 1kp8_A 472 ----DGNYGYNAATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKN 526 (547)
T ss_dssp ----CTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECCC-
T ss_pred ----CCCEeEeCCCCccccchhcCceechHhHHHHHHHHHHHHHHHHhHhheeecCCcc
Confidence 3679999999999999999999999999999999999999999999999976543
No 25
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=100.00 E-value=3e-94 Score=798.61 Aligned_cols=467 Identities=22% Similarity=0.339 Sum_probs=394.8
Q ss_pred hhhcccHHHHHHHHHHHHHHHHHhccccCccccceeeecCCCCeEEeccHHHHhhhcccCCh----hHHHHHHHHhhccc
Q psy14623 27 QKRIIGNDAIKSHIVAAKNIANTLKTSLGPKGLDKMMVSSDGDVTVTNDGATILKLMDVDHE----IAKLMVQLSQSQDD 102 (622)
Q Consensus 27 ~~~~~g~~~~~~~~~a~~~la~~v~tslGP~G~~kmi~~~~g~~~ITnDG~tIl~~l~~~hP----~akll~~~a~~~~~ 102 (622)
+...+|.++|.+|+.||+.|+++|+|||||+||+|||+++.|+++|||||+|||++|+++|| +|+|++++|++||+
T Consensus 4 k~~~~g~~ar~~~i~~~~~la~~vkttLGPkG~~kmi~~~~g~~~iTnDG~tIlk~i~~~hp~en~~Akll~e~a~~qd~ 83 (545)
T 1iok_A 4 KEVKFNSDARDRMLKGVNILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELSDKFENMGAQMVREVASRTND 83 (545)
T ss_dssp EEEEEHHHHHHHHHHHHHHHHHHHGGGCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHGGG
T ss_pred hhhhccHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEECCCCCeEEeCCHHHHHHHhccCChhhHHHHHHHHHHHHhhcc
Confidence 45688999999999999999999999999999999999999999999999999999999999 99999999999999
Q ss_pred cccCchhhHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhccccccCCCCCChHHHHHHHHHhhcCccchh
Q psy14623 103 EIGDGTTGVVVLAGALLEQAEHLLDKGIHPIRIADGFELAAQCAVKHLETIADSFPVNPDNLEPLIKTAMTTLGSKIINK 182 (622)
Q Consensus 103 ~~GDGTtt~vlLa~~Ll~~a~~li~~gi~p~~Ii~g~~~a~~~~l~~L~~~s~~i~~~~~~~~~L~~va~tsl~sk~~~~ 182 (622)
++||||||+++||++||+++.+++.+|+||+.|++||++|++.+++.|++++.++. +++.|.++|++++++
T Consensus 84 e~GDGTTtvvVLA~~Ll~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~----~~e~l~~va~iS~~~----- 154 (545)
T 1iok_A 84 EAGDGTTTATVLAQAIVREGLKAVAAGMNPMDLKRGIDVATAKVVEAIKSAARPVN----DSSEVAQVGTISANG----- 154 (545)
T ss_dssp GCSTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCBCCC----STTTTTHHHHHTTTT-----
T ss_pred ccCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCC----CHHHHHHHHHhhcCC-----
Confidence 99999999999999999999999999999999999999999999999999987664 467899999999875
Q ss_pred hHHHHHHHHHHHHHHhcccccCCCCcccEEEEEccCCCccce-eEEeeEEEeecCCCCCC-------CcccccceEEEec
Q psy14623 183 CHRQMAEIAVNAVMAVADLEKRDVNFELIKVEGKVGGKLEDT-MLVKGVVIDKDFSHPQM-------PKELRDVKLAILT 254 (622)
Q Consensus 183 ~~~~la~lv~~Av~~v~~~~~~~~~~~~I~I~~~~G~~~~dS-~li~Giv~~~~~~~~~~-------~~~~~n~ki~ll~ 254 (622)
++++++++++|+.++++. + .|+|+ .|++++|| ++++|++|+++|.+|+| ++.++||+|++++
T Consensus 155 -~~~i~~li~dAv~~V~~~---g----~I~Ve--~G~~~~ds~~lveG~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d 224 (545)
T 1iok_A 155 -ESFIGQQIAEAMQRVGNE---G----VITVE--ENKGMETEVEVVEGMQFDRGYLSPYFVTNADKMIAELEDAYILLHE 224 (545)
T ss_dssp -CHHHHHHHHHHHHHHCTT---S----CCCCE--ECSSSCCEEEEECCEECSCCCSCGGGCCCSSSSCEEEEEEEEEECS
T ss_pred -chhHHHHHHHHHHHhccC---C----eEEEE--eCCccccceEEEecEEEecCccccccccCcccCceeecCCeEEEEc
Confidence 789999999999999732 2 26665 69999999 99999999999999986 3348899999999
Q ss_pred CCCCCCCCCCCceeEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHCCC------cEEe---
Q psy14623 255 CPFEPPRPKTKHNLDVQSVEDYKELRKYEQEKFASMVDKVKATGATLAICQWGFDDEANHLLLQKQL------PAVR--- 325 (622)
Q Consensus 255 ~~l~~~~~~~~~~~~i~~~~~l~~~~~~e~~~i~~~v~~l~~~g~~lVi~~~~I~~~al~~L~~~~I------~~i~--- 325 (622)
++++ +++++ .++++++.+.|++|||++++|+++|+++|..|+| .+++
T Consensus 225 ~~I~-------------~~~~l-----------~~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~ 280 (545)
T 1iok_A 225 KKLS-------------SLQPM-----------VPLLESVIQSQKPLLIVAEDVEGEALATLVVNKLRGGLKIAAVKAPG 280 (545)
T ss_dssp SCBC-------------CCCC----------------------CCCCEEEESCBC-----------------CEEEECSC
T ss_pred CCcC-------------CHHHH-----------HHHHHHHHhcCCCEEEECCCcCHHHHHHHHHccccccceeEEEecch
Confidence 9754 34444 6788999999999999999999999999999766 4555
Q ss_pred --ecCcccHHHHHHHhCCeeccCccchhhhhhcccccCcccccccccccCccccchhhhhcCCcccccccccCccccccc
Q psy14623 326 --WVGGPDIELIAIVTGGRIVPRFEELTSEKLGKAGLGNQFWYNQRSHAGHTDIELIAIVTGGRIVPRFEELTSEKLGKA 403 (622)
Q Consensus 326 --~v~~~~L~~ia~~tGa~ii~~~~~l~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lG~~ 403 (622)
++++++|+|||++|||+++++--.+ ++++++++++|+|
T Consensus 281 ~~~~~~~~le~ia~~tGa~ii~~~~~~----------------------------------------~l~~~~~~~LG~a 320 (545)
T 1iok_A 281 FGDRRKAMLQDIAILTGGQVISEDLGM----------------------------------------KLENVTIDMLGRA 320 (545)
T ss_dssp CTTHHHHHHHHHHHHHTC-------------------------------------------------------CTTSEEE
T ss_pred hhhccHHHHHHHHHhcCCeeecccccC----------------------------------------CcccCCHHHcCcC
Confidence 7889999999999999999861110 1122788899999
Q ss_pred ccEEEEEeccccceEEEEeccCCC-----------------------------------ceEEEEEeCCCHHHHHHHHHH
Q psy14623 404 GLVREISFGTTKDHMLVIEECENS-----------------------------------KAVTIFIRGGNKMIIEEAKRS 448 (622)
Q Consensus 404 ~~v~~~~~g~~~~~~~~~~~~~~~-----------------------------------~~~TIll~G~t~~~l~E~~~~ 448 (622)
+.|++ .+++++||++|.++ ++|||+|||+|+.+++|.||+
T Consensus 321 ~~v~~-----~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~~~~~tI~lrG~te~~l~E~kr~ 395 (545)
T 1iok_A 321 KKVSI-----NKDNTTIVDGAGEKAEIEARVSQIRQQIEETTSDYDREKLQERVAKLAGGVAVIRVGGMTEIEVKERKDR 395 (545)
T ss_dssp EEEEE-----CSSCEEEESCCCCHHHHHHHHHHHHHHHTTCCCSSHHHHHHHHHHTTSSCEEEEEECCSSHHHHHHHHHH
T ss_pred cEEEE-----ecCEEEEEeCCCCHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHH
Confidence 99987 26899999999753 789999999999999999999
Q ss_pred HHHHHHHHHHHHhcCccccCCChhhhhHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHh
Q psy14623 449 IHDALCVVRNLVTENRVVYGGGAAEVSCAIAVAAEADKISSIEQYAFRAFADALESIPLALAENSGLSPIETLTEVKSRQ 528 (622)
Q Consensus 449 l~dal~~~~~~l~~g~vvpGGGa~E~~ls~~L~~~~~~~~~~~~~~~~~~a~AL~~ip~~L~~NaG~d~~~il~~L~~~~ 528 (622)
++|||+++|+++++| +|||||++|++|+.+|++++. .++++|+++++|++||+.||++|++|||+|+.+++++|++.|
T Consensus 396 i~DAl~~~r~av~~g-iVpGGGa~e~~~s~~L~~~~~-~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~~ 473 (545)
T 1iok_A 396 VDDALNATRAAVQEG-IVVGGGVALVQGAKVLEGLSG-ANSDQDAGIAIIRRALEAPMRQIAENAGVDGAVVAGKVRESS 473 (545)
T ss_dssp HHHHHHHHHHHHHHC-EEETTTHHHHHHGGGGGSCCC-SSHHHHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHhhcC-CCCCchHHHHHHHHHHHHHhc-cCchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhc
Confidence 999999999999999 999999999999999998877 788999999999999999999999999999999999999765
Q ss_pred hhcCCCceEEEccCCcccccccCCcccchHHHHHHHHHHHHHHHHHHhhhheecCCCCC
Q psy14623 529 VKEVNPALGIDCMLNGTNDMKQQNVIEALRSKKQQILLSTQLVKMILKIDDIRSPNDGI 587 (622)
Q Consensus 529 ~~~~~~~~Gid~~~g~~~d~~~~gI~dp~~vk~~~L~~A~e~a~~lL~iD~iI~~~~~~ 587 (622)
+.++|||..+|++.||++.|||||+.||+++|+.|+|+|++||++|++|...+..
T Consensus 474 ----~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~A~~iL~id~iI~~~~~~ 528 (545)
T 1iok_A 474 ----DKAFGFNAQTEEYGDMFKFGVIDPAKVVRTALEDAASVAGLLITTEAMIAEKPEP 528 (545)
T ss_dssp ----STTEEEETTTTEEEEHHHHTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECC--
T ss_pred ----CCCeeEeCCCCcccchHhcCcEEccHHHHHHHHHHHHHHHHHHhHHHhhccCCcc
Confidence 3679999999999999999999999999999999999999999999999986543
No 26
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=100.00 E-value=4.9e-92 Score=778.23 Aligned_cols=465 Identities=23% Similarity=0.315 Sum_probs=347.6
Q ss_pred hhhcccHHHHHHHHHHHHHHHHHhccccCccccceeeecCCCCeEEeccHHHHhhhcccCChh----HHHHHHHHhhccc
Q psy14623 27 QKRIIGNDAIKSHIVAAKNIANTLKTSLGPKGLDKMMVSSDGDVTVTNDGATILKLMDVDHEI----AKLMVQLSQSQDD 102 (622)
Q Consensus 27 ~~~~~g~~~~~~~~~a~~~la~~v~tslGP~G~~kmi~~~~g~~~ITnDG~tIl~~l~~~hP~----akll~~~a~~~~~ 102 (622)
|...+|.++|.+|+.||+.|+++|+|||||+||+|||+++.|+++|||||+|||++|+++||+ |+|++++|++||+
T Consensus 3 k~~~~~~~ar~~~~~~~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hp~~n~gAkll~e~a~~qd~ 82 (546)
T 3rtk_A 3 KTIAYDEEARRGLERGLNALADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIELEDPYEKIGAELVKEVAKKTDD 82 (546)
T ss_dssp ----------------------------------------------------------CCCHHHHHHHHHHHHHHTSCC-
T ss_pred ceeeccHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEECcHHHHHHHccCCChhhhHHHHHHHHHHHhhhh
Confidence 566899999999999999999999999999999999999999999999999999999999998 9999999999999
Q ss_pred cccCchhhHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHhccccccCCCCCChHHHHHHHHHhhcCccchh
Q psy14623 103 EIGDGTTGVVVLAGALLEQAEHLLDKGIHPIRIADGFELAAQCAVKHLETIADSFPVNPDNLEPLIKTAMTTLGSKIINK 182 (622)
Q Consensus 103 ~~GDGTtt~vlLa~~Ll~~a~~li~~gi~p~~Ii~g~~~a~~~~l~~L~~~s~~i~~~~~~~~~L~~va~tsl~sk~~~~ 182 (622)
++||||||+++||++||+++.++++.|+||+.|++||++|++.++++|++++.+++ +++.|.++|++|++
T Consensus 83 e~GDGTTtvvVLAgeLL~ea~~li~~GihP~~I~~G~~~A~~~a~e~L~~~s~~v~----~~e~L~~vA~iS~~------ 152 (546)
T 3rtk_A 83 VAGDGTTTATVLAQALVREGLRNVAAGANPLGLKRGIEKAVEKVTETLLKGAKEVE----TKEQIAATAAISAG------ 152 (546)
T ss_dssp ------CHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHTCBCCC----SHHHHHHHHHHHHT------
T ss_pred hhCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccCC----ChHHHHhHeEEeCC------
Confidence 99999999999999999999999999999999999999999999999999987654 58899999999887
Q ss_pred hHHHHHHHHHHHHHHhcccccCCCCcccEEEEEccCCCccceeEEeeEEEeecCCCCCC-------CcccccceEEEecC
Q psy14623 183 CHRQMAEIAVNAVMAVADLEKRDVNFELIKVEGKVGGKLEDTMLVKGVVIDKDFSHPQM-------PKELRDVKLAILTC 255 (622)
Q Consensus 183 ~~~~la~lv~~Av~~v~~~~~~~~~~~~I~I~~~~G~~~~dS~li~Giv~~~~~~~~~~-------~~~~~n~ki~ll~~ 255 (622)
++++++++++|+.++++ ++ .|.|++.. +...||++++|++|+++|.|||| ++.++|++|+++++
T Consensus 153 -~~~i~~liadAv~~V~~---dg----vI~Ve~~~-~~~~ds~lveGm~fdkg~~sp~~vt~~e~m~~~len~kIll~d~ 223 (546)
T 3rtk_A 153 -DQSIGDLIAEAMDKVGN---EG----VITVEESN-TFGLQLELTEGMRFDKGYISGYFVTDPERQEAVLEDPYILLVSS 223 (546)
T ss_dssp -CHHHHHHHHHHHHHSCT---TS----EEEEECCS-SSSCEEEEECEEEESCCBSSGGGCSBTTTTBEEEESCEEEEBSS
T ss_pred -chHHHHHHHHHHHHhcc---CC----ceEEEecC-CcccceEEeeeEEEcCCccCcccccCcccCeeEecccEEEEECC
Confidence 46899999999999873 22 28888643 44468999999999999999975 56678999999997
Q ss_pred CCCCCCCCCCceeEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHCCC------cEEe----
Q psy14623 256 PFEPPRPKTKHNLDVQSVEDYKELRKYEQEKFASMVDKVKATGATLAICQWGFDDEANHLLLQKQL------PAVR---- 325 (622)
Q Consensus 256 ~l~~~~~~~~~~~~i~~~~~l~~~~~~e~~~i~~~v~~l~~~g~~lVi~~~~I~~~al~~L~~~~I------~~i~---- 325 (622)
. +++++++ .++++++.+.|+||||++++|+++++++|..|++ .+++
T Consensus 224 k-------------Is~~~~l-----------~~~le~I~~~g~~lvIi~~~I~~~Al~~L~~n~lrg~~~v~aVk~~~~ 279 (546)
T 3rtk_A 224 K-------------VSTVKDL-----------LPLLEKVIGAGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGF 279 (546)
T ss_dssp E-------------ECCSTTT-----------HHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHHSSCCEEEEECSSC
T ss_pred c-------------cCCHHHH-----------HHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHhCCCCceEEEEeccccc
Confidence 4 4566665 6789999999999999999999999999997652 3443
Q ss_pred -ecCcccHHHHHHHhCCeeccCccchhhhhhcccccCcccccccccccCccccchhhhhcCCcccccccccCcccccccc
Q psy14623 326 -WVGGPDIELIAIVTGGRIVPRFEELTSEKLGKAGLGNQFWYNQRSHAGHTDIELIAIVTGGRIVPRFEELTSEKLGKAG 404 (622)
Q Consensus 326 -~v~~~~L~~ia~~tGa~ii~~~~~l~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~lG~~~ 404 (622)
+.++++|+|||++|||+++++...+ ++++++++.+|+|+
T Consensus 280 ~~~rk~~le~ia~~tG~~ii~~~~~~----------------------------------------~l~~~~~~~LG~a~ 319 (546)
T 3rtk_A 280 GDRRKAMLQDMAILTGGQVISEEVGL----------------------------------------TLENADLSLLGKAR 319 (546)
T ss_dssp HHHHHHHHHHHHHHHTCCCBCSSSSC----------------------------------------CSTTCCTTTSEEEE
T ss_pred cccchhhHHHHHHHhCCEEeeccccC----------------------------------------ccccCCHhhCCeeE
Confidence 3358899999999999999853221 12227888999999
Q ss_pred cEEEEEeccccceEEEEeccCCC-----------------------------------ceEEEEEeCCCHHHHHHHHHHH
Q psy14623 405 LVREISFGTTKDHMLVIEECENS-----------------------------------KAVTIFIRGGNKMIIEEAKRSI 449 (622)
Q Consensus 405 ~v~~~~~g~~~~~~~~~~~~~~~-----------------------------------~~~TIll~G~t~~~l~E~~~~l 449 (622)
.|++ + ++++++|++|.++ ++|||+|||+|+.+++|.||++
T Consensus 320 ~v~i---~--~d~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ekl~erlakl~g~~atI~vrG~te~~l~E~er~l 394 (546)
T 3rtk_A 320 KVVV---T--KDETTIVEGAGDTDAIAGRVAQIRQEIENSDSDYDREKLQERLAKLAGGVAVIKAGAATEVELKERKHRI 394 (546)
T ss_dssp EEEE---C--SSCEEEEEECSCHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHCEEEEECCCCSSTHHHHHHHHH
T ss_pred EEEE---c--CCeEEEEcCCCCHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHhcCCeEEEEeCCCCHHHHHHHHHHH
Confidence 9974 4 7899999999763 3899999999999999999999
Q ss_pred HHHHHHHHHHHhcCccccCCChhhhhHHHHHHHhhccccchhHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHhh
Q psy14623 450 HDALCVVRNLVTENRVVYGGGAAEVSCAIAVAAEADKISSIEQYAFRAFADALESIPLALAENSGLSPIETLTEVKSRQV 529 (622)
Q Consensus 450 ~dal~~~~~~l~~g~vvpGGGa~E~~ls~~L~~~~~~~~~~~~~~~~~~a~AL~~ip~~L~~NaG~d~~~il~~L~~~~~ 529 (622)
+|||+++|+++++| +|||||++|++++.+|++++ +++++|+++++|++||+.||++|++|||+|+.+++++|++.+
T Consensus 395 ~DAl~a~r~av~~g-iVpGGGa~e~~~s~~L~~~~--~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~~- 470 (546)
T 3rtk_A 395 EDAVRNAKAAVEEG-IVAGGGVTLLQAAPTLDELK--LEGDEATGANIVKVALEAPLKQIAFNSGLEPGVVAEKVRNLP- 470 (546)
T ss_dssp HHHHHHHHHHHHHC-EEETTTHHHHTTGGGSTTSC--CCTTHHHHHHHHHHHTTHHHHHHHTTTTCCHHHHHHHHHHSC-
T ss_pred HHHHHHHHHHHhCC-cccCCcHHHHHHHHHHHHhc--cccHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhc-
Confidence 99999999999999 99999999999999999887 789999999999999999999999999999999999998741
Q ss_pred hcCCCceEEEccCCcccccccCCcccchHHHHHHHHHHHHHHHHHHhhhheecCCCCC
Q psy14623 530 KEVNPALGIDCMLNGTNDMKQQNVIEALRSKKQQILLSTQLVKMILKIDDIRSPNDGI 587 (622)
Q Consensus 530 ~~~~~~~Gid~~~g~~~d~~~~gI~dp~~vk~~~L~~A~e~a~~lL~iD~iI~~~~~~ 587 (622)
..+|||+.+|++.||++.|||||+.||+++|+.|+|+|++||++|++|...+..
T Consensus 471 ----~~~G~d~~~g~~~Dm~~~gI~dp~~vk~~al~~A~e~A~~iL~id~iI~~~~~~ 524 (546)
T 3rtk_A 471 ----AGHGLNAQTGVYEDLLAAGVADPVKVTRSALQNAASIAGLFLTTEAVVADKPEK 524 (546)
T ss_dssp ----TTEECCSSSCCCEETTTTTCEEEHHHHHHHHHHHHHHHHHHHHCC---------
T ss_pred ----CCEeEcCCCCcEeeHHHcCCEecHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 338999999999999999999999999999999999999999999999876543
No 27
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=100.00 E-value=5.4e-35 Score=279.27 Aligned_cols=173 Identities=28% Similarity=0.554 Sum_probs=149.8
Q ss_pred ccceeEEeeEEEeecCCCCCCCcccccceEEEecCCCCCCCCCCCceeEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Q psy14623 221 LEDTMLVKGVVIDKDFSHPQMPKELRDVKLAILTCPFEPPRPKTKHNLDVQSVEDYKELRKYEQEKFASMVDKVKATGAT 300 (622)
Q Consensus 221 ~~dS~li~Giv~~~~~~~~~~~~~~~n~ki~ll~~~l~~~~~~~~~~~~i~~~~~l~~~~~~e~~~i~~~v~~l~~~g~~ 300 (622)
++||++++|++|++++.++.||++++|+||++++++|++++++.++++.++++++++.+.+.|++++++.+++|++.|++
T Consensus 1 ~~dS~lv~Gvvl~k~~~~~~mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~n 80 (178)
T 1gml_A 1 MEDSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCEDIIQLKPD 80 (178)
T ss_dssp --CCSEEEEEEESCCCSSTTSCCEEESCCEEEESSCBSCC--------------CHHHHHHHHHHHHHHHHHHHHTTCCS
T ss_pred CCCcEEEEEEEEeccccCCCCCcccccceEEEEecccCCccccCccEEEECCHHHHHHHHHHHHHHHHHHHHHHhhcCCc
Confidence 36999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCCHHHHHHHHHCCCcEEeecCcccHHHHHHHhCCeeccCccchhhhhhcccccCcccccccccccCccccchh
Q psy14623 301 LAICQWGFDDEANHLLLQKQLPAVRWVGGPDIELIAIVTGGRIVPRFEELTSEKLGKAGLGNQFWYNQRSHAGHTDIELI 380 (622)
Q Consensus 301 lVi~~~~I~~~al~~L~~~~I~~i~~v~~~~L~~ia~~tGa~ii~~~~~l~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~ 380 (622)
|||++++|+|.|++||.++||++++++++++|+|||++|||++++++++
T Consensus 81 VVl~~k~I~d~a~~~l~k~gI~~vr~v~~~dleria~atGa~iv~~~~~------------------------------- 129 (178)
T 1gml_A 81 VVITEKGISDLAQHYLMRANVTAIRRVRKTDNNRIARACGARIVSRPEE------------------------------- 129 (178)
T ss_dssp EEEESSCBCHHHHHHHHHTTCEEECCCCHHHHHHHHHHHCCCEESCGGG-------------------------------
T ss_pred EEEECCcccHHHHHHHHHCCCEEEecCCHHHHHHHHHHhCCeEeCChhh-------------------------------
Confidence 9999999999999999999999999999999999999999999999987
Q ss_pred hhhcCCcccccccccCcccccc-cccEEEEEeccccceEEEEeccCCCceEEEEEeCCCHH
Q psy14623 381 AIVTGGRIVPRFEELTSEKLGK-AGLVREISFGTTKDHMLVIEECENSKAVTIFIRGGNKM 440 (622)
Q Consensus 381 ~~~~~~~~~~~~~~l~~~~lG~-~~~v~~~~~g~~~~~~~~~~~~~~~~~~TIll~G~t~~ 440 (622)
++++.+|+ |+.|+++.+| +++|+||+||++++.|||+|||++.+
T Consensus 130 --------------l~~~~LG~~~~~v~~~~ig--~~~~~~~~gc~~~~~~TIllRG~~~~ 174 (178)
T 1gml_A 130 --------------LREDDVGTGAGLLEIKKIG--DEYFTFITDCKDPKACTILLRGASHH 174 (178)
T ss_dssp --------------CCGGGSBCCEEEEEEEEET--TEEEEEEEEESSTTSCEEEEEC----
T ss_pred --------------CChhhhCCcccEEEEEEEC--CeEEEEEECCCCCCEEEEEEECCCcc
Confidence 77888999 9999999999 78999999999999999999999864
No 28
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=99.96 E-value=3.8e-30 Score=240.87 Aligned_cols=154 Identities=32% Similarity=0.585 Sum_probs=147.4
Q ss_pred EeeEEEeecCCCCCCCcccccceEEEecCCCCCCCCCCCceeEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEec
Q psy14623 227 VKGVVIDKDFSHPQMPKELRDVKLAILTCPFEPPRPKTKHNLDVQSVEDYKELRKYEQEKFASMVDKVKATGATLAICQW 306 (622)
Q Consensus 227 i~Giv~~~~~~~~~~~~~~~n~ki~ll~~~l~~~~~~~~~~~~i~~~~~l~~~~~~e~~~i~~~v~~l~~~g~~lVi~~~ 306 (622)
++|++|++++.++.||++++||||++++++|+++++++++++.++++++++.+.+.|+++++..+++|++.|++|||+++
T Consensus 1 i~Gvv~~k~~~~~~mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~nVVl~~k 80 (159)
T 1ass_A 1 MSGIVIDKEKVHSKMPDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQK 80 (159)
T ss_dssp CCCEEESCCCSCTTSCSEEEEEEEEEESSCBSCCHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHTTCSEEEESS
T ss_pred CceEEEecccCCCCCCcCcCCccEEEEecCcCCcccccceeEEECCHHHHHHHHHHHHHHHHHHhhhhhhCCCeEEEECC
Confidence 57999999999999999999999999999999999998889999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHCCCcEEeecCcccHHHHHHHhCCeeccCccchhhhhhcccccCcccccccccccCccccchhhhhcCC
Q psy14623 307 GFDDEANHLLLQKQLPAVRWVGGPDIELIAIVTGGRIVPRFEELTSEKLGKAGLGNQFWYNQRSHAGHTDIELIAIVTGG 386 (622)
Q Consensus 307 ~I~~~al~~L~~~~I~~i~~v~~~~L~~ia~~tGa~ii~~~~~l~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (622)
+|+|.|++||.++||++++++++++|+|||++|||++++++++
T Consensus 81 ~I~d~a~~~l~k~gI~~v~~v~~~dleria~atGa~iv~~~~~------------------------------------- 123 (159)
T 1ass_A 81 GIDDVAQHYLAKEGIYAVRRVKKSDMEKLAKATGAKIVTDLDD------------------------------------- 123 (159)
T ss_dssp CBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHTCCCBSSTTS-------------------------------------
T ss_pred ccCHHHHHHHHHCCCEEEccCCHHHHHHHHHHhCCeeeCcccc-------------------------------------
Confidence 9999999999999999999999999999999999999999987
Q ss_pred cccccccccCcccccccccEEEEEeccccceEEEEeccCCC
Q psy14623 387 RIVPRFEELTSEKLGKAGLVREISFGTTKDHMLVIEECENS 427 (622)
Q Consensus 387 ~~~~~~~~l~~~~lG~~~~v~~~~~g~~~~~~~~~~~~~~~ 427 (622)
++++.+|+|+.|+++.+| ++++++|++|++.
T Consensus 124 --------l~~~~LG~~~~v~e~~ig--~~~~~~~~g~~~~ 154 (159)
T 1ass_A 124 --------LTPSVLGEAETVEERKIG--DDRMTFVMGCKNH 154 (159)
T ss_dssp --------CCTTSCEEEEEEEEEEET--TEEEEEEESCC--
T ss_pred --------CCcccCccceEEEEEEEC--CeEEEEEECCCCc
Confidence 778889999999999999 7899999999864
No 29
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis}
Probab=99.39 E-value=4.3e-13 Score=125.65 Aligned_cols=156 Identities=24% Similarity=0.336 Sum_probs=113.4
Q ss_pred eEEeeEEEeecCCCCCCCcccccceEEEecCCCCCCCCCCCceeEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEE
Q psy14623 225 MLVKGVVIDKDFSHPQMPKELRDVKLAILTCPFEPPRPKTKHNLDVQSVEDYKELRKYEQEKFASMVDKVKATGATLAIC 304 (622)
Q Consensus 225 ~li~Giv~~~~~~~~~~~~~~~n~ki~ll~~~l~~~~~~~~~~~~i~~~~~l~~~~~~e~~~i~~~v~~l~~~g~~lVi~ 304 (622)
++++|+.|++||.||||.++.++.. +.++.|+.+. ++.++++.+++ .++++.+.+.+.||+|+
T Consensus 3 evvEGmqfDrGYiSpyfvtd~~~m~-~~le~p~ILi-----tdkKIs~i~~i-----------lP~LE~~~~~~kpLlII 65 (194)
T 3m6c_A 3 EFTEGIGFDKGFLSAYFVTDFDNQQ-AVLEDALILL-----HQDKISSLPDL-----------LPLLEKVAGTGKPLLIV 65 (194)
T ss_dssp CCCSSEEESCCBSCGGGCSBTTTTB-EEEEEEEEEE-----BSSEECCHHHH-----------HHHHHHHHHHTCCEEEE
T ss_pred EEEeeeEccCcccCceeeeccCCcE-EEEecceEEE-----EcCccCCHHHH-----------HHHHHHHHHhCCCeEEE
Confidence 5789999999999999998865544 4456666553 34468899987 99999999999999999
Q ss_pred ecCCCHHHHHHHHHCCCc------EEeec-----CcccHHHHHHHhCCeeccCccchhhhhhcccccCcccccccccccC
Q psy14623 305 QWGFDDEANHLLLQKQLP------AVRWV-----GGPDIELIAIVTGGRIVPRFEELTSEKLGKAGLGNQFWYNQRSHAG 373 (622)
Q Consensus 305 ~~~I~~~al~~L~~~~I~------~i~~v-----~~~~L~~ia~~tGa~ii~~~~~l~~~~lg~~~~~~~~~~~~~~~~~ 373 (622)
+++|+.+|+..|.-|++. +++.- ++..|++||.+|||++++.--.+
T Consensus 66 AedvegeaLatLvvNklrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~----------------------- 122 (194)
T 3m6c_A 66 AEDVEGEALATLVVNAIRKTLKAVAVKGPYFGDRRKAFLEDLAVVTGGQVVNPDAGM----------------------- 122 (194)
T ss_dssp ESEECHHHHHHHHHHHHHTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTC-----------------------
T ss_pred ecccccchhhhhhhhhccceEEEEEEECCCCchhhhhhhHhHHHhcCCeEEeccCCc-----------------------
Confidence 999999999999876554 23322 36778888888888887642111
Q ss_pred ccccchhhhhcCCcccccccccCcccccccccEEEEEeccccceEEEEeccCCCceEEEEE-eCCCHHHHHHHHHHHHHH
Q psy14623 374 HTDIELIAIVTGGRIVPRFEELTSEKLGKAGLVREISFGTTKDHMLVIEECENSKAVTIFI-RGGNKMIIEEAKRSIHDA 452 (622)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~l~~~~lG~~~~v~~~~~g~~~~~~~~~~~~~~~~~~TIll-~G~t~~~l~E~~~~l~da 452 (622)
++++.+.+++|+|+++.+ +++. |.++ +++++..++++...++.-
T Consensus 123 -----------------~Le~~~~~~LG~a~~v~v-----tkd~-------------T~iv~G~g~~~~I~~Rv~qIr~~ 167 (194)
T 3m6c_A 123 -----------------VLREVGLEVLGSARRVVV-----SKDD-------------TVIVDGGGTAEAVANRAKHLRAE 167 (194)
T ss_dssp -----------------CGGGCCGGGCEEEEEEEE-----CSSC-------------EEEEEECCCHHHHHHHHHHHHHH
T ss_pred -----------------ccccCCHHHCCCccEEEE-----cCCc-------------eEEecCCCCHHHHHHHHHHHHHH
Confidence 234478889999998876 2332 3344 446777777776666665
Q ss_pred HHH
Q psy14623 453 LCV 455 (622)
Q Consensus 453 l~~ 455 (622)
+..
T Consensus 168 ie~ 170 (194)
T 3m6c_A 168 IDK 170 (194)
T ss_dssp HHT
T ss_pred HHh
Confidence 543
No 30
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1
Probab=99.37 E-value=4.6e-13 Score=119.79 Aligned_cols=101 Identities=26% Similarity=0.335 Sum_probs=80.9
Q ss_pred eEEEeecCCCCCCCcccccceEEEecCCCCCCCCCCCceeEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEecCC
Q psy14623 229 GVVIDKDFSHPQMPKELRDVKLAILTCPFEPPRPKTKHNLDVQSVEDYKELRKYEQEKFASMVDKVKATGATLAICQWGF 308 (622)
Q Consensus 229 Giv~~~~~~~~~~~~~~~n~ki~ll~~~l~~~~~~~~~~~~i~~~~~l~~~~~~e~~~i~~~v~~l~~~g~~lVi~~~~I 308 (622)
|+.|++||.||||.++.++.. +.++.|+.+. ++.++++.+++ .++++++.+.+.+|+|++++|
T Consensus 1 GmqfDrGYlSpYfvtd~e~m~-~~le~p~ILi-----tdkKIs~i~~l-----------lP~LE~v~~~~~pLlIIAedv 63 (145)
T 1srv_A 1 GYQFDKGYISPYFVTNPETME-AVLEDAFILI-----VEKKVSNVREL-----------LPILEQVAQTGKPLLIIAEDV 63 (145)
T ss_dssp CEEESCCBSCGGGCSBTTTTB-EEEEEEEEEE-----ESSEECCHHHH-----------HHHHHHHHTTTCCEEEEESEE
T ss_pred CccccCCccCceeecCccccE-EEeeccEEEE-----ecccccCHHHH-----------HHHHHHHHHHCCCEEEEeccc
Confidence 899999999999998865544 4456666553 34468999998 999999999999999999999
Q ss_pred CHHHHHHHHHCCCc------EEeec-----CcccHHHHHHHhCCeeccC
Q psy14623 309 DDEANHLLLQKQLP------AVRWV-----GGPDIELIAIVTGGRIVPR 346 (622)
Q Consensus 309 ~~~al~~L~~~~I~------~i~~v-----~~~~L~~ia~~tGa~ii~~ 346 (622)
+.+|+..|.-|++. +++.- ++..|++||.+|||+++++
T Consensus 64 egeaLatLvvNklrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~vise 112 (145)
T 1srv_A 64 EGEALATLVVNKLRGTLSVAAVKAPGFGDRRKEMLKDIAAVTGGTVISE 112 (145)
T ss_dssp CHHHHHHHHHHHHTTSCCEEEEECCSSHHHHHHHHHHHHHHHTCCEECT
T ss_pred chhhhhhhhhhhhcccceEEEEeCCCcchhhHHHHHHHHHHhCCEEEcc
Confidence 99999999876554 22221 5788999999999998865
No 31
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A
Probab=99.36 E-value=1.5e-12 Score=122.20 Aligned_cols=153 Identities=20% Similarity=0.253 Sum_probs=112.9
Q ss_pred eeEEEeecCCCCCCCcccccceEEEecCCCCCCCCCCCceeEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEecC
Q psy14623 228 KGVVIDKDFSHPQMPKELRDVKLAILTCPFEPPRPKTKHNLDVQSVEDYKELRKYEQEKFASMVDKVKATGATLAICQWG 307 (622)
Q Consensus 228 ~Giv~~~~~~~~~~~~~~~n~ki~ll~~~l~~~~~~~~~~~~i~~~~~l~~~~~~e~~~i~~~v~~l~~~g~~lVi~~~~ 307 (622)
+|+.|++||.||||.++.++.. +.|+.|+.+. ++.+|++.+++ .++++.+.+.+.||+|++++
T Consensus 13 ~~~qfDrGYiSPYfvtd~e~m~-~~le~p~ILi-----tdkKIs~i~~i-----------lP~LE~v~~~~rpLlIIAED 75 (201)
T 3osx_A 13 EGMQFDRGYLSPYFINKPESGS-VELENPYILL-----VDKKISNIREL-----------LPVLEGVAKASKPLVIIAED 75 (201)
T ss_dssp CCEEESCCBSCGGGCSBTTTTB-EEEESCEEEE-----EEEEECCHHHH-----------HHHHHHHHTSSCCEEEEEEE
T ss_pred cccEecCccCChheeecccCCE-EEecCCeEEE-----EcCccCCHHHH-----------HHHHHHHHHhCCCeEEEecc
Confidence 6999999999999999865555 5567777654 56678999998 99999999999999999999
Q ss_pred CCHHHHHHHHHCCCc------EEeec-----CcccHHHHHHHhCCeeccCccchhhhhhcccccCcccccccccccCccc
Q psy14623 308 FDDEANHLLLQKQLP------AVRWV-----GGPDIELIAIVTGGRIVPRFEELTSEKLGKAGLGNQFWYNQRSHAGHTD 376 (622)
Q Consensus 308 I~~~al~~L~~~~I~------~i~~v-----~~~~L~~ia~~tGa~ii~~~~~l~~~~lg~~~~~~~~~~~~~~~~~~~~ 376 (622)
|+.+|+..|.-|++. +++.- ++..|++||.+|||++++.--.+
T Consensus 76 vegEALatLvvNklrg~l~v~AVKAPgFGdrRk~~L~DIAilTGg~visee~g~-------------------------- 129 (201)
T 3osx_A 76 VEGEALATLVVNNMRGIVKVASVKAPGFGDRRKAMLQDIATLTNGTVISEEIGL-------------------------- 129 (201)
T ss_dssp ECHHHHHHHHHHHHHTSCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTC--------------------------
T ss_pred ccchhhhHHHHhhccceEEEEEEeCCCCccchhhhhHhHHHHhCCEEEecccCC--------------------------
Confidence 999999999876544 23322 36778888888888887642111
Q ss_pred cchhhhhcCCcccccccccCcccccccccEEEEEeccccceEEEEeccCCCceEEEEE-eCCCHHHHHHHHHHHHHHHHH
Q psy14623 377 IELIAIVTGGRIVPRFEELTSEKLGKAGLVREISFGTTKDHMLVIEECENSKAVTIFI-RGGNKMIIEEAKRSIHDALCV 455 (622)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~l~~~~lG~~~~v~~~~~g~~~~~~~~~~~~~~~~~~TIll-~G~t~~~l~E~~~~l~dal~~ 455 (622)
++++.+.+.+|+|++|.+ +++. |.++ +++++..++++...|+.-+..
T Consensus 130 --------------~Le~~~~~~LG~a~~V~v-----tkd~-------------TtIv~G~G~~~~I~~Rv~qIr~qie~ 177 (201)
T 3osx_A 130 --------------ELEKATLEDLGQAKRVVI-----NKDT-------------TTIIDGVGEEGAIAARVTQIRQQIEE 177 (201)
T ss_dssp --------------CGGGCCGGGCEEEEEEEE-----CSSC-------------EEEEEECCCHHHHHHHHHHHHHHHHT
T ss_pred --------------ccccCCHhhCCCccEEEE-----cCCc-------------eEEecCCCCHHHHHHHHHHHHHHHHh
Confidence 234477889999998876 2332 3444 446777777776666665543
No 32
>1o13_A Probable NIFB protein; ribonuclease H-like motif fold, structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.83A {Thermotoga maritima} SCOP: c.55.5.1 PDB: 1t3v_A
Probab=53.59 E-value=26 Score=30.65 Aligned_cols=52 Identities=21% Similarity=0.277 Sum_probs=38.2
Q ss_pred HHHHHHhcCCcEEEEecCCCHHHHHHHHHCCCcEEeecCcccHHHHHHHhCCe
Q psy14623 290 MVDKVKATGATLAICQWGFDDEANHLLLQKQLPAVRWVGGPDIELIAIVTGGR 342 (622)
Q Consensus 290 ~v~~l~~~g~~lVi~~~~I~~~al~~L~~~~I~~i~~v~~~~L~~ia~~tGa~ 342 (622)
..+.|.+.++++||+. .+.+.+...|.++||.++.......-+.|.....+.
T Consensus 68 ~a~~L~~~gv~vVI~g-~IG~~a~~~L~~~GI~v~~~~~g~i~eal~~~~~G~ 119 (136)
T 1o13_A 68 VPNFVKEKGAELVIVR-GIGRRAIAAFEAMGVKVIKGASGTVEEVVNQYLSGQ 119 (136)
T ss_dssp HHHHHHHTTCSEEECS-CCCHHHHHHHHHTTCEEECSCCSBHHHHHHHHHTTC
T ss_pred HHHHHHHCCCCEEEEC-CCCHHHHHHHHHCCCEEEecCCCCHHHHHHHHHhCC
Confidence 3455667899999996 799999999999999999865544344444444443
No 33
>2yx6_A Hypothetical protein PH0822; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; HET: ADP; 2.00A {Pyrococcus horikoshii}
Probab=50.49 E-value=34 Score=28.98 Aligned_cols=53 Identities=21% Similarity=0.299 Sum_probs=38.7
Q ss_pred HHHHHHHhcCCcEEEEecCCCHHHHHHHHHCCCcEEeecCcccHHHHHHHhCCe
Q psy14623 289 SMVDKVKATGATLAICQWGFDDEANHLLLQKQLPAVRWVGGPDIELIAIVTGGR 342 (622)
Q Consensus 289 ~~v~~l~~~g~~lVi~~~~I~~~al~~L~~~~I~~i~~v~~~~L~~ia~~tGa~ 342 (622)
...+.|...++++||+. .+.+.+...|.++||.++.......-+.|.....+.
T Consensus 54 ~~~~~L~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~~~v~eal~~~~~g~ 106 (121)
T 2yx6_A 54 DLPNFIKDHGAKIVLTY-GIGRRAIEYFNSLGISVVTGVYGRISDVIKAFIGGK 106 (121)
T ss_dssp HHHHHHHHTTCCEEECS-BCCHHHHHHHHHTTCEEECSBCSBHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCEEEEC-CCCHhHHHHHHHCCCEEEECCCCCHHHHHHHHHcCC
Confidence 34555667899999996 699999999999999999865543334444444333
No 34
>1eo1_A Hypothetical protein MTH1175; mixed A/B protein, mixed beta sheet, strand order 321456; NMR {Methanothermobacterthermautotrophicus} SCOP: c.55.5.1
Probab=45.92 E-value=39 Score=28.68 Aligned_cols=52 Identities=17% Similarity=0.167 Sum_probs=38.0
Q ss_pred HHHHHHhcCCcEEEEecCCCHHHHHHHHHCCCcEEeecCcccHHHHHHHhCCe
Q psy14623 290 MVDKVKATGATLAICQWGFDDEANHLLLQKQLPAVRWVGGPDIELIAIVTGGR 342 (622)
Q Consensus 290 ~v~~l~~~g~~lVi~~~~I~~~al~~L~~~~I~~i~~v~~~~L~~ia~~tGa~ 342 (622)
..+.|...|+++||+. .+.+.+...|.++||.++.......-+.|.....+.
T Consensus 57 ~~~~l~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~~~i~eal~~~~~g~ 108 (124)
T 1eo1_A 57 TAQIIANNGVKAVIAS-SPGPNAFEVLNELGIKIYRATGTSVEENLKLFTEGN 108 (124)
T ss_dssp HHHHHHHTTCCEEEEC-CSSHHHHHHHHHHTCEEEECCSCCHHHHHHHHHTTC
T ss_pred HHHHHHHCCCCEEEEC-CcCHHHHHHHHHCCCEEEEcCCCCHHHHHHHHHhCC
Confidence 3455667899999996 699999999999999999865543334444444443
No 35
>2wfb_A Putative uncharacterized protein ORP; mixed molybdenum-copper sulphide cluster, alpha and beta protein, biosynthetic protein; 2.00A {Desulfovibrio gigas}
Probab=43.80 E-value=40 Score=28.45 Aligned_cols=52 Identities=12% Similarity=0.084 Sum_probs=37.9
Q ss_pred HHHHHHHhcCCcEEEEecCCCHHHHHHHHHCCCcEEeecCc-ccHHHHHHHhCC
Q psy14623 289 SMVDKVKATGATLAICQWGFDDEANHLLLQKQLPAVRWVGG-PDIELIAIVTGG 341 (622)
Q Consensus 289 ~~v~~l~~~g~~lVi~~~~I~~~al~~L~~~~I~~i~~v~~-~~L~~ia~~tGa 341 (622)
...+.|...++++||+. .+.+.+...|.++||.++..... ..-+.|.....+
T Consensus 58 ~~~~~l~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~g~~i~eal~~~~~g 110 (120)
T 2wfb_A 58 NAAQVLAKSGAGVLLTG-YVGPKAFQALQAAGIKVGQDLEGLTVRQAVQRFLDG 110 (120)
T ss_dssp HHHHHHHHHTEEEEECS-CCCHHHHHHHHHTTCEEECCCTTSBHHHHHHHHHTT
T ss_pred HHHHHHHHCCCCEEEEC-CCCHhHHHHHHHCCCEEEEcCCCCcHHHHHHHHHcC
Confidence 34566666899999996 79999999999999999986554 333444444333
No 36
>2re2_A Uncharacterized protein TA1041; dinitrogenase iron-molybdenum cofactor, structural genomics, center for structural genomics; HET: MSE; 1.30A {Thermoplasma acidophilum dsm 1728}
Probab=39.43 E-value=60 Score=28.26 Aligned_cols=50 Identities=8% Similarity=0.106 Sum_probs=36.3
Q ss_pred HHHHHHHhcCCcEEEEecCCCHHHHHHHHHCCCcEEeecCcccHHHHHHHhC
Q psy14623 289 SMVDKVKATGATLAICQWGFDDEANHLLLQKQLPAVRWVGGPDIELIAIVTG 340 (622)
Q Consensus 289 ~~v~~l~~~g~~lVi~~~~I~~~al~~L~~~~I~~i~~v~~~~L~~ia~~tG 340 (622)
...+.|...++++||+. ++.+.+...|.+ ||.++.......-+.+.....
T Consensus 70 ~~~~~L~~~gv~~VI~g-~iG~~a~~~L~~-GI~v~~~~~~~veeal~~~~~ 119 (136)
T 2re2_A 70 FMLKSALDHGANALVLS-EIGSPGFNFIKN-KMDVYIVPEMPVADALKLILE 119 (136)
T ss_dssp HHHHHHHHTTCSEEEES-CCBHHHHHHHTT-TSEEEECCSCBHHHHHHHHHT
T ss_pred HHHHHHHHcCCCEEEEC-CCCHhHHHHHHC-CCEEEEcCCCCHHHHHHHHHh
Confidence 44566667899999996 799999999999 999998754333333343333
No 37
>1rdu_A Conserved hypothetical protein; atnos, candid, structural genomics, joint center for structu genomics, JCSG, protein structure initiative; NMR {Thermotoga maritima} SCOP: c.55.5.1
Probab=33.94 E-value=40 Score=28.25 Aligned_cols=51 Identities=24% Similarity=0.317 Sum_probs=37.4
Q ss_pred HHHHHhcCCcEEEEecCCCHHHHHHHHHCCCcEEeecCcccHHHHHHHhCCe
Q psy14623 291 VDKVKATGATLAICQWGFDDEANHLLLQKQLPAVRWVGGPDIELIAIVTGGR 342 (622)
Q Consensus 291 v~~l~~~g~~lVi~~~~I~~~al~~L~~~~I~~i~~v~~~~L~~ia~~tGa~ 342 (622)
.+.|...|+++||+. .+.+.+...|.++||.++.......-+.|.....+.
T Consensus 55 ~~~l~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~~~i~eal~~~~~g~ 105 (116)
T 1rdu_A 55 VQSLVSKGVEYLIAS-NVGRNAFETLKAAGVKVYRFEGGTVQEAIDAFSEGR 105 (116)
T ss_dssp HHHHHTTTCCEEECS-SCCSSCHHHHHTTTCEEECCCSCBHHHHHHHHHTTC
T ss_pred HHHHHHcCCCEEEEC-CCCHhHHHHHHHCCCEEEECCCCCHHHHHHHHHhCC
Confidence 345667899999996 699999999999999999865544344444444443
No 38
>2xzm_U Ribosomal protein L7AE containing protein; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_U
Probab=30.65 E-value=1.2e+02 Score=25.98 Aligned_cols=50 Identities=12% Similarity=0.086 Sum_probs=36.7
Q ss_pred HHHHHHHhcCCcEEEEecCCCH-----HHHHHHHHCCCcEEeecCcccHHHHHHHhCC
Q psy14623 289 SMVDKVKATGATLAICQWGFDD-----EANHLLLQKQLPAVRWVGGPDIELIAIVTGG 341 (622)
Q Consensus 289 ~~v~~l~~~g~~lVi~~~~I~~-----~al~~L~~~~I~~i~~v~~~~L~~ia~~tGa 341 (622)
..+..+.+-.+.+||++.+.+| ....++..++|.++.-- ...+|..++|-
T Consensus 31 ~v~Kai~~gka~LViiA~D~~p~~~~~~i~~lc~~~~Ip~~~v~---sk~~LG~a~G~ 85 (126)
T 2xzm_U 31 EVLRTIEAKQALFVCVAEDCDQGNYVKLVKALCAKNEIKYVSVP---KRASLGEYLGH 85 (126)
T ss_dssp HHHHHHHHTCCSEEEEESSCCSTTHHHHHHHHHHHTTCCEEEES---CSHHHHHHHTC
T ss_pred HHHHHHHcCCceEEEEeCCCChHHHHHHHHHHHHHhCCCEEEEC---CHHHHHHHHCC
Confidence 4445566667899999999975 45678889999998533 45567777773
No 39
>2qtd_A Uncharacterized protein MJ0327; ribonuclease H-like motif fold, iron-molybdenum cofactor, ST genomics; HET: MSE PG4; 1.70A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID} PDB: 2kla_A
Probab=29.28 E-value=1.2e+02 Score=24.72 Aligned_cols=47 Identities=13% Similarity=0.191 Sum_probs=34.5
Q ss_pred HHHHhcCCcEEEEecCCCHHHHHHHHHCCCcEEeecCcccHHHHHHHhC
Q psy14623 292 DKVKATGATLAICQWGFDDEANHLLLQKQLPAVRWVGGPDIELIAIVTG 340 (622)
Q Consensus 292 ~~l~~~g~~lVi~~~~I~~~al~~L~~~~I~~i~~v~~~~L~~ia~~tG 340 (622)
+.+...++++||+. ++.+.+.+.|.++ |.++.......-+.|.....
T Consensus 50 ~~l~~~gv~~vi~~-~iG~~a~~~L~~~-I~v~~~~~~~v~eal~~~~~ 96 (105)
T 2qtd_A 50 KSIVKENVNAIICK-NISEENYKKFSKK-IEIYHAEGDDVDKNISLFIE 96 (105)
T ss_dssp HHHHHTCCSEEEES-CCCHHHHHHHHTT-CEEEECCSSCHHHHHHHHHT
T ss_pred HHHHHCCCCEEEEC-CCCHHHHHHHHhc-cEEEECCCCCHHHHHHHHHc
Confidence 44556899999995 7999999999999 99998655433344444433
No 40
>3v7q_A Probable ribosomal protein YLXQ; L7AE superfamily, K-turn binding, K-turn RNA, hypothetical R protein, RNA binding protein; HET: CIT; 1.55A {Bacillus subtilis}
Probab=28.34 E-value=1.4e+02 Score=24.41 Aligned_cols=51 Identities=8% Similarity=0.089 Sum_probs=36.2
Q ss_pred HHHHHHHhcCCcEEEEecCCCHHHH----HHHHHCCCcEEeecCcccHHHHHHHhCCe
Q psy14623 289 SMVDKVKATGATLAICQWGFDDEAN----HLLLQKQLPAVRWVGGPDIELIAIVTGGR 342 (622)
Q Consensus 289 ~~v~~l~~~g~~lVi~~~~I~~~al----~~L~~~~I~~i~~v~~~~L~~ia~~tGa~ 342 (622)
...+.+.+-.+.+||++.+.++... +++...+|.++... .-+.|..++|-.
T Consensus 26 ~v~kai~~gka~lViiA~D~~~~~~~~i~~~c~~~~vp~~~~~---s~~eLG~A~Gk~ 80 (101)
T 3v7q_A 26 LVIKEIRNARAKLVLLTEDASSNTAKKVTDKCNYYKVPYKKVE---SRAVLGRSIGKE 80 (101)
T ss_dssp HHHHHHHTTCCSEEEEETTSCHHHHHHHHHHHHHTTCCEEEES---CHHHHHHHTTSS
T ss_pred hhHHHHhcCceeEEEEeccccccchhhhcccccccCCCeeeec---hHHHHHhhhCcc
Confidence 4455566667899999999998544 45678899988764 445566777754
No 41
>2lbw_A H/ACA ribonucleoprotein complex subunit 2; L7AE, snoRNP, scaRNP, RNA binding protein; NMR {Saccharomyces cerevisiae} PDB: 2lbx_A
Probab=26.06 E-value=1.3e+02 Score=25.62 Aligned_cols=49 Identities=8% Similarity=0.025 Sum_probs=35.7
Q ss_pred HHHHHHHhcCCcEEEEecCCCHH-----HHHHHHHCCCcEEeecCcccHHHHHHHhC
Q psy14623 289 SMVDKVKATGATLAICQWGFDDE-----ANHLLLQKQLPAVRWVGGPDIELIAIVTG 340 (622)
Q Consensus 289 ~~v~~l~~~g~~lVi~~~~I~~~-----al~~L~~~~I~~i~~v~~~~L~~ia~~tG 340 (622)
..+..+.+..+.+||++.++++. ...+|..++|..+.--++ ++|..++|
T Consensus 27 ~v~kai~~gkakLViiA~D~~~~~~~~~l~~lc~~~~VP~~~v~sk---~eLG~a~g 80 (121)
T 2lbw_A 27 EVVKALRKGEKGLVVIAGDIWPADVISHIPVLCEDHSVPYIFIPSK---QDLGAAGA 80 (121)
T ss_dssp HHHHHHHHSCCCEEEECTTCSCTTHHHHHHHHHHHTCCCEEECCCH---HHHHHHHT
T ss_pred HHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHhcCCcEEEECCH---HHHHHHhC
Confidence 44556666678999999999984 446788899998765444 45666677
No 42
>3on1_A BH2414 protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, unknown function; HET: MSE; 1.65A {Bacillus halodurans}
Probab=24.63 E-value=1.4e+02 Score=24.39 Aligned_cols=51 Identities=16% Similarity=0.100 Sum_probs=35.4
Q ss_pred HHHHHHHhcCCcEEEEecCCCHHHHH----HHHHCCCcEEeecCcccHHHHHHHhCCe
Q psy14623 289 SMVDKVKATGATLAICQWGFDDEANH----LLLQKQLPAVRWVGGPDIELIAIVTGGR 342 (622)
Q Consensus 289 ~~v~~l~~~g~~lVi~~~~I~~~al~----~L~~~~I~~i~~v~~~~L~~ia~~tGa~ 342 (622)
...+.+.+-.+.+||.+.+.++.... ++..++|.++... .-+.|..++|-.
T Consensus 25 ~v~kai~~gka~lViiA~D~~~~~~~~i~~~c~~~~ip~~~~~---s~~eLG~a~Gk~ 79 (101)
T 3on1_A 25 QVVKAVQNGQVTLVILSSDAGIHTKKKLLDKCGSYQIPVKVVG---NRQMLGRAIGKH 79 (101)
T ss_dssp HHHHHHHTTCCSEEEEETTSCHHHHHHHHHHHHHHTCCEEEES---CHHHHHHHTTSS
T ss_pred HHHHHHHcCCCcEEEEeCCCCHHHHHHHHHHHHHcCCCEEEeC---CHHHHHHHhCCc
Confidence 44555666678999999999986544 4567888887643 445566677753
No 43
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=24.05 E-value=1.2e+02 Score=23.73 Aligned_cols=50 Identities=10% Similarity=-0.009 Sum_probs=34.4
Q ss_pred HHHHHHHhcCCcEEEEecCCCHHHHH----HHHHCCCcEEeecCcccHHHHHHHhCC
Q psy14623 289 SMVDKVKATGATLAICQWGFDDEANH----LLLQKQLPAVRWVGGPDIELIAIVTGG 341 (622)
Q Consensus 289 ~~v~~l~~~g~~lVi~~~~I~~~al~----~L~~~~I~~i~~v~~~~L~~ia~~tGa 341 (622)
..++.+.+-.+.+||++.++++.... ++..++|..+.--++ ++|..++|-
T Consensus 18 ~v~kai~~gkaklViiA~D~~~~~~~~i~~lc~~~~Ip~~~v~sk---~eLG~a~Gk 71 (82)
T 3v7e_A 18 QTVKALKRGSVKEVVVAKDADPILTSSVVSLAEDQGISVSMVESM---KKLGKACGI 71 (82)
T ss_dssp HHHHHHTTTCEEEEEEETTSCHHHHHHHHHHHHHHTCCEEEESCH---HHHHHHHTC
T ss_pred HHHHHHHcCCeeEEEEeCCCCHHHHHHHHHHHHHcCCCEEEECCH---HHHHHHhCC
Confidence 44455555667999999999987554 456789988775444 455666663
No 44
>3iz5_f 60S ribosomal protein L30 (L30E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_f
Probab=21.75 E-value=2.4e+02 Score=23.55 Aligned_cols=51 Identities=8% Similarity=0.135 Sum_probs=36.0
Q ss_pred HHHHHHHHhcCCcEEEEecCCCHH----HHHHHHHCCCcEEee-cCcccHHHHHHHhCC
Q psy14623 288 ASMVDKVKATGATLAICQWGFDDE----ANHLLLQKQLPAVRW-VGGPDIELIAIVTGG 341 (622)
Q Consensus 288 ~~~v~~l~~~g~~lVi~~~~I~~~----al~~L~~~~I~~i~~-v~~~~L~~ia~~tGa 341 (622)
.+.++.+.+-.+.+||++.+.++. ...++..++|.++.- -+..+ |..++|-
T Consensus 32 ~~t~kai~~gkakLVilA~D~~~~~~~~i~~~c~~~~ipv~~~~~s~~e---LG~A~Gk 87 (112)
T 3iz5_f 32 KTVLKTLRSSLGKLIILANNCPPLRKSEIETYAMLAKISVHHFHGNNVD---LGTACGK 87 (112)
T ss_dssp HHHHHHHHTTCCSEEEECSCCCHHHHHHHHHHHHHTTCCEECCCCTTCT---HHHHHCT
T ss_pred HHHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCCcEEEeCCCHHH---HHHHhCC
Confidence 345566666778999999999984 445678899998875 45555 4555553
No 45
>3psh_A Protein HI_1472; substrate binding protein, periplasmic binding protein, MOLY binding protein, metal transport; 1.50A {Haemophilus influenzae} PDB: 3psa_A
Probab=20.21 E-value=1.8e+02 Score=28.61 Aligned_cols=51 Identities=20% Similarity=0.139 Sum_probs=38.9
Q ss_pred HHHHhcCCcEEEEecCCCHHHHHHHHHCCCcEEeec-C-------------------------cccHHHHHHHhCCe
Q psy14623 292 DKVKATGATLAICQWGFDDEANHLLLQKQLPAVRWV-G-------------------------GPDIELIAIVTGGR 342 (622)
Q Consensus 292 ~~l~~~g~~lVi~~~~I~~~al~~L~~~~I~~i~~v-~-------------------------~~~L~~ia~~tGa~ 342 (622)
|+|...+++|||.....++...+.|.+.||.++.-- . .+.++.+++++|-.
T Consensus 78 E~i~~l~PDlIi~~~~~~~~~~~~L~~~Gipvv~~~~~~~~~~~~~~~~pt~~~~~~~~~~~~~~~i~~lg~~lg~e 154 (326)
T 3psh_A 78 ESLLALKPDVVFVTNYAPSEMIKQISDVNIPVVAISLRTGEVGEKGKLNPTLTDEDKAYNDGLKQGIELIAEVFEKK 154 (326)
T ss_dssp HHHHHTCCSEEEEETTCCHHHHHHHHTTTCCEEEECSCCSCGGGTTCSSCCCTTHHHHHHHHHHHHHHHHHHHHTCH
T ss_pred HHHHccCCCEEEEeCCCChHHHHHHHHcCCCEEEEeccccccccccccccccccccchhhhhHHHHHHHHHHHcCCH
Confidence 556677999999887667788889999999987531 1 25678888888854
No 46
>2ale_A SNU13, NHP2/L7AE family protein YEL026W; splicing, RNA, yeast, His-TAG, RNA binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: d.79.3.1 PDB: 1zwz_A 2ozb_A 3siu_A 3siv_A 1e7k_A
Probab=20.02 E-value=1.2e+02 Score=26.43 Aligned_cols=50 Identities=12% Similarity=-0.005 Sum_probs=35.5
Q ss_pred HHHHHHHhcCCcEEEEecCCCHH-----HHHHHHHCCCcEEeecCcccHHHHHHHhCC
Q psy14623 289 SMVDKVKATGATLAICQWGFDDE-----ANHLLLQKQLPAVRWVGGPDIELIAIVTGG 341 (622)
Q Consensus 289 ~~v~~l~~~g~~lVi~~~~I~~~-----al~~L~~~~I~~i~~v~~~~L~~ia~~tGa 341 (622)
..+..+.+..+.+||++.++++. ...+|.+.||..+.-- .-++|..++|-
T Consensus 39 ~v~kai~~gkakLViiA~D~~p~~~~~~l~~lc~~~~VP~~~v~---sk~eLG~a~G~ 93 (134)
T 2ale_A 39 EATKTLNRGISEFIIMAADCEPIEILLHLPLLCEDKNVPYVFVP---SRVALGRACGV 93 (134)
T ss_dssp HHHHHHHHTCEEEEEEETTCSSGGGGTHHHHHHHHHTCCEEEES---CHHHHHHHTTC
T ss_pred HHHHHHHhCCCeEEEEeCCCCHHHHHHHHHHHHHhcCCCEEEEC---CHHHHHHHhCC
Confidence 34455555677999999999985 5567888899977643 34466667664
Done!