BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14626
(249 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 275 bits (702), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 129/190 (67%), Positives = 152/190 (80%), Gaps = 13/190 (6%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
DLKREA+ICHMLKHPH+VELLETYSS+GMLYMVFE+MDG+D+CFEIV+RA AGFVYSEAV
Sbjct: 74 DLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAV 133
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCS 170
ASHYMRQ+LEALRYCH+N+IIHRD+KPHCVLLA+KENSAPVKLGGFGVAIQL + L
Sbjct: 134 ASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLV-- 191
Query: 171 GGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSRD 230
AG R+GTPH+MAPEV++ + YGKPVD+W PF G+++
Sbjct: 192 -----------AGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE 240
Query: 231 RLFQSITKGK 240
RLF+ I KGK
Sbjct: 241 RLFEGIIKGK 250
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 7/55 (12%)
Query: 1 MLSVDPNKRITIHEVINHKWLKMKLHTSAEIEPASFGLPD--ERLNHYTTEADLK 53
ML +DP +RIT++E +NH WLK + + +I LP+ E+L + LK
Sbjct: 272 MLMLDPAERITVYEALNHPWLKERDRYAYKIH-----LPETVEQLRKFNARRKLK 321
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 274 bits (700), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 129/190 (67%), Positives = 152/190 (80%), Gaps = 13/190 (6%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
DLKREA+ICHMLKHPH+VELLETYSS+GMLYMVFE+MDG+D+CFEIV+RA AGFVYSEAV
Sbjct: 72 DLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAV 131
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCS 170
ASHYMRQ+LEALRYCH+N+IIHRD+KPHCVLLA+KENSAPVKLGGFGVAIQL + L
Sbjct: 132 ASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLV-- 189
Query: 171 GGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSRD 230
AG R+GTPH+MAPEV++ + YGKPVD+W PF G+++
Sbjct: 190 -----------AGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE 238
Query: 231 RLFQSITKGK 240
RLF+ I KGK
Sbjct: 239 RLFEGIIKGK 248
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 7/55 (12%)
Query: 1 MLSVDPNKRITIHEVINHKWLKMKLHTSAEIEPASFGLPD--ERLNHYTTEADLK 53
ML +DP +RIT++E +NH WLK + + +I LP+ E+L + LK
Sbjct: 270 MLMLDPAERITVYEALNHPWLKERDRYAYKIH-----LPETVEQLRKFNARRKLK 319
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 265 bits (676), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 126/190 (66%), Positives = 149/190 (78%), Gaps = 13/190 (6%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
DLKREA+ICHMLKHPH+VELLETYSS+GMLYMVFE+MDG+D+CFEIV+RA AGFVYSEAV
Sbjct: 72 DLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAV 131
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCS 170
ASHYMRQ+LEALRYCH+N+IIHRD+KP VLLA+KENSAPVKLG FGVAIQL + L
Sbjct: 132 ASHYMRQILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLV-- 189
Query: 171 GGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSRD 230
AG R+GTPH+MAPEV++ + YGKPVD+W PF G+++
Sbjct: 190 -----------AGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE 238
Query: 231 RLFQSITKGK 240
RLF+ I KGK
Sbjct: 239 RLFEGIIKGK 248
Score = 36.2 bits (82), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 7/55 (12%)
Query: 1 MLSVDPNKRITIHEVINHKWLKMKLHTSAEIEPASFGLPD--ERLNHYTTEADLK 53
ML +DP +RIT++E +NH WLK + + +I LP+ E+L + LK
Sbjct: 270 MLMLDPAERITVYEALNHPWLKERDRYAYKIH-----LPETVEQLRKFNARRKLK 319
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 137 bits (345), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 108/189 (57%), Gaps = 18/189 (9%)
Query: 52 LKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVA 111
L+REA IC +LKHP++V L ++ S EG Y+VF+ + G ++ +IV R YSEA A
Sbjct: 50 LEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVARE----YYSEADA 105
Query: 112 SHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSG 171
SH ++Q+LE++ +CH N I+HRD+KP +LLA+K A VKL FG+AI++Q Q G
Sbjct: 106 SHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFG 165
Query: 172 GERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVG-SRD 230
GTP Y++PEV+ YGKPVD+W PF +
Sbjct: 166 F-------------AGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQH 212
Query: 231 RLFQSITKG 239
RL+Q I G
Sbjct: 213 RLYQQIKAG 221
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 15/21 (71%)
Query: 1 MLSVDPNKRITIHEVINHKWL 21
ML+++P KRIT E + H W+
Sbjct: 244 MLTINPAKRITASEALKHPWI 264
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 136 bits (343), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 108/189 (57%), Gaps = 18/189 (9%)
Query: 52 LKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVA 111
L+REA IC +LKHP++V L ++ S EG Y+VF+ + G ++ +IV R YSEA A
Sbjct: 50 LEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVARE----YYSEADA 105
Query: 112 SHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSG 171
SH ++Q+LE++ +CH N I+HRD+KP +LLA+K A VKL FG+AI++Q Q G
Sbjct: 106 SHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFG 165
Query: 172 GERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVG-SRD 230
GTP Y++PEV+ YGKPVD+W PF +
Sbjct: 166 FA-------------GTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQH 212
Query: 231 RLFQSITKG 239
RL+Q I G
Sbjct: 213 RLYQQIKAG 221
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 15/21 (71%)
Query: 1 MLSVDPNKRITIHEVINHKWL 21
ML+++P KRIT E + H W+
Sbjct: 244 MLTINPAKRITASEALKHPWI 264
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 132 bits (331), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/189 (40%), Positives = 108/189 (57%), Gaps = 18/189 (9%)
Query: 52 LKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVA 111
L+REA IC +LKHP++V L ++ S EG Y+VF+ + G ++ +IV R YSEA A
Sbjct: 77 LEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVARE----YYSEADA 132
Query: 112 SHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSG 171
SH + Q+LE++ + H++DI+HRD+KP +LLA+K A VKL FG+AI++Q Q G
Sbjct: 133 SHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFG 192
Query: 172 GERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVG-SRD 230
GTP Y++PEV+ YGKPVDIW PF +
Sbjct: 193 FA-------------GTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQH 239
Query: 231 RLFQSITKG 239
+L+Q I G
Sbjct: 240 KLYQQIKAG 248
Score = 28.1 bits (61), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 1 MLSVDPNKRITIHEVINHKWL 21
ML+++P KRIT + + H W+
Sbjct: 271 MLTINPAKRITADQALKHPWV 291
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 131 bits (329), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 108/189 (57%), Gaps = 18/189 (9%)
Query: 52 LKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVA 111
L+REA IC +LKH ++V L ++ S EG Y+VF+ + G ++ +IV R YSEA A
Sbjct: 50 LEREARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVARE----YYSEADA 105
Query: 112 SHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSG 171
SH ++Q+LEA+ +CH+ ++HRD+KP +LLA+K A VKL FG+AI++Q Q G
Sbjct: 106 SHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFG 165
Query: 172 GERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVG-SRD 230
GTP Y++PEV+ + YGKPVDIW PF +
Sbjct: 166 FA-------------GTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQH 212
Query: 231 RLFQSITKG 239
+L+Q I G
Sbjct: 213 KLYQQIKAG 221
Score = 32.3 bits (72), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 16/21 (76%)
Query: 1 MLSVDPNKRITIHEVINHKWL 21
ML+++P KRIT HE + H W+
Sbjct: 244 MLTINPAKRITAHEALKHPWV 264
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 130 bits (328), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 108/189 (57%), Gaps = 18/189 (9%)
Query: 52 LKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVA 111
L+REA IC +LKHP++V L ++ S EG Y++F+ + G ++ +IV R YSEA A
Sbjct: 68 LEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVARE----YYSEADA 123
Query: 112 SHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSG 171
SH ++Q+LEA+ +CH+ ++HRD+KP +LLA+K A VKL FG+AI+++ Q G
Sbjct: 124 SHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFG 183
Query: 172 GERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVG-SRD 230
GTP Y++PEV+ YGKPVD+W PF +
Sbjct: 184 -------------FAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQH 230
Query: 231 RLFQSITKG 239
RL+Q I G
Sbjct: 231 RLYQQIKAG 239
Score = 30.4 bits (67), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 16/21 (76%)
Query: 1 MLSVDPNKRITIHEVINHKWL 21
ML+++P+KRIT E + H W+
Sbjct: 262 MLTINPSKRITAAEALKHPWI 282
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 108/189 (57%), Gaps = 18/189 (9%)
Query: 52 LKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVA 111
L+REA IC +LKHP++V L ++ S EG Y++F+ + G ++ +IV R YSEA A
Sbjct: 57 LEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVARE----YYSEADA 112
Query: 112 SHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSG 171
SH ++Q+LEA+ +CH+ ++HR++KP +LLA+K A VKL FG+AI+++ Q G
Sbjct: 113 SHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFG 172
Query: 172 GERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVG-SRD 230
GTP Y++PEV+ YGKPVD+W PF +
Sbjct: 173 FA-------------GTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQH 219
Query: 231 RLFQSITKG 239
RL+Q I G
Sbjct: 220 RLYQQIKAG 228
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 16/21 (76%)
Query: 1 MLSVDPNKRITIHEVINHKWL 21
ML+++P+KRIT E + H W+
Sbjct: 251 MLTINPSKRITAAEALKHPWI 271
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 128 bits (322), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 96/158 (60%), Gaps = 18/158 (11%)
Query: 52 LKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVA 111
L+REA IC L+HP++V L ++ E Y+VF+ + G ++ +IV R YSEA A
Sbjct: 75 LEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE----FYSEADA 130
Query: 112 SHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSG 171
SH ++Q+LE++ YCH N I+HR++KP +LLA+K A VKL FG+AI++ D + +
Sbjct: 131 SHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF 190
Query: 172 GERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
GTP Y++PEV++ Y KPVDIW
Sbjct: 191 A--------------GTPGYLSPEVLKKDPYSKPVDIW 214
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 128 bits (322), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 104/189 (55%), Gaps = 19/189 (10%)
Query: 52 LKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVA 111
L+REA IC L+HP++V L ++ E Y+VF+ + G ++ +IV R YSEA A
Sbjct: 52 LEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE----FYSEADA 107
Query: 112 SHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSG 171
SH ++Q+LE++ YCH N I+HR++KP +LLA+K A VKL FG+AI++ D + +
Sbjct: 108 SHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF 167
Query: 172 GERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVG-SRD 230
GTP Y++PEV++ Y KPVDIW PF +
Sbjct: 168 A--------------GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH 213
Query: 231 RLFQSITKG 239
RL+ I G
Sbjct: 214 RLYAQIKAG 222
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 128 bits (321), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 104/189 (55%), Gaps = 19/189 (10%)
Query: 52 LKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVA 111
L+REA IC L+HP++V L ++ E Y+VF+ + G ++ +IV R YSEA A
Sbjct: 52 LEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE----FYSEADA 107
Query: 112 SHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSG 171
SH ++Q+LE++ YCH N I+HR++KP +LLA+K A VKL FG+AI++ D + +
Sbjct: 108 SHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF 167
Query: 172 GERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVG-SRD 230
GTP Y++PEV++ Y KPVDIW PF +
Sbjct: 168 A--------------GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH 213
Query: 231 RLFQSITKG 239
RL+ I G
Sbjct: 214 RLYAQIKAG 222
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 128 bits (321), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 104/189 (55%), Gaps = 19/189 (10%)
Query: 52 LKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVA 111
L+REA IC L+HP++V L ++ E Y+VF+ + G ++ +IV R YSEA A
Sbjct: 51 LEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE----FYSEADA 106
Query: 112 SHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSG 171
SH ++Q+LE++ YCH N I+HR++KP +LLA+K A VKL FG+AI++ D + +
Sbjct: 107 SHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGF 166
Query: 172 GERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVG-SRD 230
GTP Y++PEV++ Y KPVDIW PF +
Sbjct: 167 A--------------GTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH 212
Query: 231 RLFQSITKG 239
RL+ I G
Sbjct: 213 RLYAQIKAG 221
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 97.4 bits (241), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 98/200 (49%), Gaps = 20/200 (10%)
Query: 42 RLNHYTTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRAT 101
++ T + L RE + L HP++++L E + +G Y+V E G ++ EI+ R
Sbjct: 63 QVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR 122
Query: 102 AGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQ 161
+SE A+ +RQVL + Y H+N I+HRD+KP +LL +K A +++ FG++
Sbjct: 123 ----FSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTH 178
Query: 162 LQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXX 221
+ + K +IGT +Y+APEV+ Y + D+W
Sbjct: 179 FE--------------ASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSG 223
Query: 222 XXPFVGSRD-RLFQSITKGK 240
PF G+ + + + + KGK
Sbjct: 224 CPPFNGANEYDILKKVEKGK 243
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 97.4 bits (241), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 98/200 (49%), Gaps = 20/200 (10%)
Query: 42 RLNHYTTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRAT 101
++ T + L RE + L HP++++L E + +G Y+V E G ++ EI+ R
Sbjct: 86 QVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR 145
Query: 102 AGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQ 161
+SE A+ +RQVL + Y H+N I+HRD+KP +LL +K A +++ FG++
Sbjct: 146 ----FSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTH 201
Query: 162 LQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXX 221
+ + K +IGT +Y+APEV+ Y + D+W
Sbjct: 202 FE--------------ASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSG 246
Query: 222 XXPFVGSRD-RLFQSITKGK 240
PF G+ + + + + KGK
Sbjct: 247 CPPFNGANEYDILKKVEKGK 266
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 97.4 bits (241), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 98/200 (49%), Gaps = 20/200 (10%)
Query: 42 RLNHYTTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRAT 101
++ T + L RE + L HP++++L E + +G Y+V E G ++ EI+ R
Sbjct: 87 QVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR 146
Query: 102 AGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQ 161
+SE A+ +RQVL + Y H+N I+HRD+KP +LL +K A +++ FG++
Sbjct: 147 ----FSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTH 202
Query: 162 LQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXX 221
+ + K +IGT +Y+APEV+ Y + D+W
Sbjct: 203 FE--------------ASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSG 247
Query: 222 XXPFVGSRD-RLFQSITKGK 240
PF G+ + + + + KGK
Sbjct: 248 CPPFNGANEYDILKKVEKGK 267
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 97.1 bits (240), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 96/193 (49%), Gaps = 19/193 (9%)
Query: 49 EADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSE 108
E ++ E + H +KHP++V L + Y S G LY++ + + G ++ IV + GF Y+E
Sbjct: 60 EGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEK---GF-YTE 115
Query: 109 AVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLY 168
AS + QVL+A++Y H+ I+HRD+KP +L + + + + + FG++ G +
Sbjct: 116 RDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVL 175
Query: 169 CSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGS 228
+ GTP Y+APEV+ + Y K VD W PF
Sbjct: 176 STA--------------CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDE 221
Query: 229 RD-RLFQSITKGK 240
D +LF+ I K +
Sbjct: 222 NDAKLFEQILKAE 234
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 97.1 bits (240), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 96/193 (49%), Gaps = 19/193 (9%)
Query: 49 EADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSE 108
E ++ E + H +KHP++V L + Y S G LY++ + + G ++ IV + GF Y+E
Sbjct: 60 EGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEK---GF-YTE 115
Query: 109 AVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLY 168
AS + QVL+A++Y H+ I+HRD+KP +L + + + + + FG++ G +
Sbjct: 116 RDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVL 175
Query: 169 CSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGS 228
+ GTP Y+APEV+ + Y K VD W PF
Sbjct: 176 STA--------------CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDE 221
Query: 229 RD-RLFQSITKGK 240
D +LF+ I K +
Sbjct: 222 NDAKLFEQILKAE 234
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 97.1 bits (240), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 99/204 (48%), Gaps = 20/204 (9%)
Query: 38 LPDERLNHYTTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIV 97
+ ++ T + L RE + L HP++++L E + +G Y+V E G ++ EI+
Sbjct: 65 ISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII 124
Query: 98 RRATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFG 157
R +SE A+ +RQVL + Y H+N I+HRD+KP +LL +K A +++ FG
Sbjct: 125 SRKR----FSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFG 180
Query: 158 VAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXX 217
++ + + K +IGT +Y+APEV+ Y + D+W
Sbjct: 181 LSTHFEA--------------SKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYI 225
Query: 218 XXXXXXPFVGSRD-RLFQSITKGK 240
PF G+ + + + + KGK
Sbjct: 226 LLSGCPPFNGANEYDILKKVEKGK 249
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 97.1 bits (240), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 96/193 (49%), Gaps = 19/193 (9%)
Query: 49 EADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSE 108
E ++ E + H +KHP++V L + Y S G LY++ + + G ++ IV + GF Y+E
Sbjct: 60 EGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEK---GF-YTE 115
Query: 109 AVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLY 168
AS + QVL+A++Y H+ I+HRD+KP +L + + + + + FG++ G +
Sbjct: 116 RDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVL 175
Query: 169 CSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGS 228
+ GTP Y+APEV+ + Y K VD W PF
Sbjct: 176 STA--------------CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDE 221
Query: 229 RD-RLFQSITKGK 240
D +LF+ I K +
Sbjct: 222 NDAKLFEQILKAE 234
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 97.1 bits (240), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 96/193 (49%), Gaps = 19/193 (9%)
Query: 49 EADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSE 108
E ++ E + H +KHP++V L + Y S G LY++ + + G ++ IV + GF Y+E
Sbjct: 60 EGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEK---GF-YTE 115
Query: 109 AVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLY 168
AS + QVL+A++Y H+ I+HRD+KP +L + + + + + FG++ G +
Sbjct: 116 RDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVL 175
Query: 169 CSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGS 228
+ GTP Y+APEV+ + Y K VD W PF
Sbjct: 176 STA--------------CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDE 221
Query: 229 RD-RLFQSITKGK 240
D +LF+ I K +
Sbjct: 222 NDAKLFEQILKAE 234
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 97/200 (48%), Gaps = 20/200 (10%)
Query: 42 RLNHYTTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRAT 101
++ T + L RE + L HP++ +L E + +G Y+V E G ++ EI+ R
Sbjct: 63 QVKQKTDKESLLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR 122
Query: 102 AGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQ 161
+SE A+ +RQVL + Y H+N I+HRD+KP +LL +K A +++ FG++
Sbjct: 123 ----FSEVDAARIIRQVLSGITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTH 178
Query: 162 LQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXX 221
+ + K +IGT +Y+APEV+ Y + D+W
Sbjct: 179 FE--------------ASKKXKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSG 223
Query: 222 XXPFVGSRD-RLFQSITKGK 240
PF G+ + + + + KGK
Sbjct: 224 CPPFNGANEYDILKKVEKGK 243
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 95/192 (49%), Gaps = 20/192 (10%)
Query: 49 EADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSE 108
++ L+ E + +KH ++V L + Y S Y+V + + G ++ I+ R VY+E
Sbjct: 50 DSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERG----VYTE 105
Query: 109 AVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLY 168
AS ++QVL A++Y HEN I+HRD+KP +L E ++ + + FG++ Q+G +
Sbjct: 106 KDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMS 165
Query: 169 CSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFV-G 227
+ GTP Y+APEV+ + Y K VD W PF
Sbjct: 166 TA---------------CGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEE 210
Query: 228 SRDRLFQSITKG 239
+ +LF+ I +G
Sbjct: 211 TESKLFEKIKEG 222
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 94.0 bits (232), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 101/195 (51%), Gaps = 20/195 (10%)
Query: 47 TTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVY 106
++ + L E + +L HP++++L + + + Y+V E G ++ EI+ R +
Sbjct: 78 SSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMK----F 133
Query: 107 SEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQ 166
+E A+ ++QVL + Y H+++I+HRD+KP +LL +KE A +K+ FG++ ++ +
Sbjct: 134 NEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQK 193
Query: 167 LYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFV 226
K R+GT +Y+APEV+ +KY + D+W PF
Sbjct: 194 --------------KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFG 238
Query: 227 GSRDR-LFQSITKGK 240
G D+ + + + KGK
Sbjct: 239 GQTDQEILRKVEKGK 253
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 94.0 bits (232), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 97/190 (51%), Gaps = 20/190 (10%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E ++ L HP++++L + + + Y+V E+ +G ++ +I+ R + E A++
Sbjct: 96 EISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHK----FDECDAANI 151
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
M+Q+L + Y H+++I+HRDIKP +LL NK + +K+ FG++
Sbjct: 152 MKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSK---------- 201
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSRDR-LF 233
K R+GT +Y+APEV++ +KY + D+W PF G D+ +
Sbjct: 202 ----DYKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDII 256
Query: 234 QSITKGKLHI 243
+ + KGK +
Sbjct: 257 KKVEKGKYYF 266
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 1 MLSVDPNKRITIHEVINHKWLK 22
ML+ D NKR T E +N +W+K
Sbjct: 285 MLTYDYNKRCTAEEALNSRWIK 306
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 104/230 (45%), Gaps = 27/230 (11%)
Query: 5 DPNKRITIHEVINH-KW--LKMKLHTSAEIEPASFGLPDERLNHYTTEAD-LKREATICH 60
D N+ T+ I W +K+ + I A+ +P ++ + D K+E I
Sbjct: 23 DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIP----KYFVEDVDRFKQEIEIMK 78
Query: 61 MLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLE 120
L HP+++ L ET+ +Y+V E G E+ R V+ E+ A+ M+ VL
Sbjct: 79 SLDHPNIIRLYETFEDNTDIYLVMELCTGG----ELFERVVHKRVFRESDAARIMKDVLS 134
Query: 121 ALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTT 180
A+ YCH+ ++ HRD+KP L +P+KL FG+A + + G++ +
Sbjct: 135 AVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRT---------- 184
Query: 181 KAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSRD 230
++GTP+Y++P+V+E YG D W PF D
Sbjct: 185 ----KVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTD 229
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 104/230 (45%), Gaps = 27/230 (11%)
Query: 5 DPNKRITIHEVINH-KW--LKMKLHTSAEIEPASFGLPDERLNHYTTEAD-LKREATICH 60
D N+ T+ I W +K+ + I A+ +P ++ + D K+E I
Sbjct: 6 DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIP----KYFVEDVDRFKQEIEIMK 61
Query: 61 MLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLE 120
L HP+++ L ET+ +Y+V E G E+ R V+ E+ A+ M+ VL
Sbjct: 62 SLDHPNIIRLYETFEDNTDIYLVMELCTGG----ELFERVVHKRVFRESDAARIMKDVLS 117
Query: 121 ALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTT 180
A+ YCH+ ++ HRD+KP L +P+KL FG+A + + G++ +
Sbjct: 118 AVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRT---------- 167
Query: 181 KAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSRD 230
++GTP+Y++P+V+E YG D W PF D
Sbjct: 168 ----KVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTD 212
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 93/188 (49%), Gaps = 20/188 (10%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E + L HP++++L E + + Y+V E G ++ EI+ R +SE A+
Sbjct: 54 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQK----FSEVDAAVI 109
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
M+QVL Y H+++I+HRD+KP +LL +K A +K+ FG++ + G
Sbjct: 110 MKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG--------- 160
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSRDR-LF 233
K R+GT +Y+APEV+ +KY + D+W PF G D+ +
Sbjct: 161 -----GKMKERLGTAYYIAPEVLR-KKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEIL 214
Query: 234 QSITKGKL 241
+ + KGK
Sbjct: 215 KRVEKGKF 222
Score = 30.4 bits (67), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 16/21 (76%)
Query: 1 MLSVDPNKRITIHEVINHKWL 21
ML+ +P+KRI+ E +NH W+
Sbjct: 243 MLTYEPSKRISAEEALNHPWI 263
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 93/188 (49%), Gaps = 20/188 (10%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E + L HP++++L E + + Y+V E G ++ EI+ R +SE A+
Sbjct: 71 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQK----FSEVDAAVI 126
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
M+QVL Y H+++I+HRD+KP +LL +K A +K+ FG++ + G
Sbjct: 127 MKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG--------- 177
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSRDR-LF 233
K R+GT +Y+APEV+ +KY + D+W PF G D+ +
Sbjct: 178 -----GKMKERLGTAYYIAPEVLR-KKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEIL 231
Query: 234 QSITKGKL 241
+ + KGK
Sbjct: 232 KRVEKGKF 239
Score = 30.4 bits (67), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 10/21 (47%), Positives = 16/21 (76%)
Query: 1 MLSVDPNKRITIHEVINHKWL 21
ML+ +P+KRI+ E +NH W+
Sbjct: 260 MLTYEPSKRISAEEALNHPWI 280
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 94/193 (48%), Gaps = 19/193 (9%)
Query: 49 EADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSE 108
E+ ++ E + +KH ++V L + Y S LY+V + + G ++ IV + GF Y+E
Sbjct: 64 ESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEK---GF-YTE 119
Query: 109 AVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLY 168
AS +RQVL+A+ Y H I+HRD+KP +L +++ + + + FG++ G +
Sbjct: 120 KDASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVM 179
Query: 169 CSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGS 228
+ GTP Y+APEV+ + Y K VD W PF
Sbjct: 180 STA--------------CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDE 225
Query: 229 RD-RLFQSITKGK 240
D +LF+ I K +
Sbjct: 226 NDSKLFEQILKAE 238
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 107/221 (48%), Gaps = 24/221 (10%)
Query: 21 LKMKLHTSAEIEPASFGLPDERLNHYTTEADLKREATICHMLKHPHVVELLETYSSEGML 80
+K+ HT+ + A + + L + ++RE + +L+HPH+++L + S+ +
Sbjct: 29 VKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEI 88
Query: 81 YMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCV 140
MV EY G+++ IV+R SE A + +Q++ A+ YCH + I+HRD+KP +
Sbjct: 89 IMVIEYA-GNELFDYIVQRDKM----SEQEARRFFQQIISAVEYCHRHKIVHRDLKPENL 143
Query: 141 LLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQ 200
LL N VK+ FG++ + DG + G+P+Y APEVI +
Sbjct: 144 LLDEHLN---VKIADFGLSNIMTDGNFLKTS--------------CGSPNYAAPEVISGK 186
Query: 201 KYGKP-VDIWXXXXXXXXXXXXXXPFVG-SRDRLFQSITKG 239
Y P VD+W PF S LF++I+ G
Sbjct: 187 LYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNG 227
Score = 30.8 bits (68), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 1 MLSVDPNKRITIHEVINHKWLKMKL 25
ML V+P RI+IHE++ W K+ L
Sbjct: 246 MLIVNPLNRISIHEIMQDDWFKVDL 270
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 107/221 (48%), Gaps = 24/221 (10%)
Query: 21 LKMKLHTSAEIEPASFGLPDERLNHYTTEADLKREATICHMLKHPHVVELLETYSSEGML 80
+K+ HT+ + A + + L + ++RE + +L+HPH+++L + S+ +
Sbjct: 20 VKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEI 79
Query: 81 YMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCV 140
MV EY G+++ IV+R SE A + +Q++ A+ YCH + I+HRD+KP +
Sbjct: 80 IMVIEYA-GNELFDYIVQRDKM----SEQEARRFFQQIISAVEYCHRHKIVHRDLKPENL 134
Query: 141 LLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQ 200
LL N VK+ FG++ + DG + G+P+Y APEVI +
Sbjct: 135 LLDEHLN---VKIADFGLSNIMTDGNFLKTS--------------CGSPNYAAPEVISGK 177
Query: 201 KYGKP-VDIWXXXXXXXXXXXXXXPFVG-SRDRLFQSITKG 239
Y P VD+W PF S LF++I+ G
Sbjct: 178 LYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNG 218
Score = 30.8 bits (68), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 1 MLSVDPNKRITIHEVINHKWLKMKL 25
ML V+P RI+IHE++ W K+ L
Sbjct: 237 MLIVNPLNRISIHEIMQDDWFKVDL 261
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 107/221 (48%), Gaps = 24/221 (10%)
Query: 21 LKMKLHTSAEIEPASFGLPDERLNHYTTEADLKREATICHMLKHPHVVELLETYSSEGML 80
+K+ HT+ + A + + L + ++RE + +L+HPH+++L + S+ +
Sbjct: 30 VKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEI 89
Query: 81 YMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCV 140
MV EY G+++ IV+R SE A + +Q++ A+ YCH + I+HRD+KP +
Sbjct: 90 IMVIEYA-GNELFDYIVQRDKM----SEQEARRFFQQIISAVEYCHRHKIVHRDLKPENL 144
Query: 141 LLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQ 200
LL N VK+ FG++ + DG + G+P+Y APEVI +
Sbjct: 145 LLDEHLN---VKIADFGLSNIMTDGNFLKTS--------------CGSPNYAAPEVISGK 187
Query: 201 KYGKP-VDIWXXXXXXXXXXXXXXPFVG-SRDRLFQSITKG 239
Y P VD+W PF S LF++I+ G
Sbjct: 188 LYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNG 228
Score = 30.8 bits (68), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 1 MLSVDPNKRITIHEVINHKWLKMKL 25
ML V+P RI+IHE++ W K+ L
Sbjct: 247 MLIVNPLNRISIHEIMQDDWFKVDL 271
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 89/188 (47%), Gaps = 20/188 (10%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE + L HP++++L E Y+V E G ++ EI++R +SE A+
Sbjct: 70 REVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR----FSEHDAAR 125
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
++QV + Y H+++I+HRD+KP +LL +KE +K+ FG++ Q
Sbjct: 126 IIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-------- 177
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSRD-RL 232
TK RIGT +Y+APEV+ Y + D+W PF G + +
Sbjct: 178 ------TKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDI 230
Query: 233 FQSITKGK 240
+ + GK
Sbjct: 231 LKRVETGK 238
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 107/221 (48%), Gaps = 24/221 (10%)
Query: 21 LKMKLHTSAEIEPASFGLPDERLNHYTTEADLKREATICHMLKHPHVVELLETYSSEGML 80
+K+ HT+ + A + + L + ++RE + +L+HPH+++L + S+ +
Sbjct: 24 VKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEI 83
Query: 81 YMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCV 140
MV EY G+++ IV+R SE A + +Q++ A+ YCH + I+HRD+KP +
Sbjct: 84 IMVIEYA-GNELFDYIVQRDKM----SEQEARRFFQQIISAVEYCHRHKIVHRDLKPENL 138
Query: 141 LLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQ 200
LL N VK+ FG++ + DG + G+P+Y APEVI +
Sbjct: 139 LLDEHLN---VKIADFGLSNIMTDGNFLKTS--------------CGSPNYAAPEVISGK 181
Query: 201 KYGKP-VDIWXXXXXXXXXXXXXXPFVG-SRDRLFQSITKG 239
Y P VD+W PF S LF++I+ G
Sbjct: 182 LYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNG 222
Score = 30.8 bits (68), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 1 MLSVDPNKRITIHEVINHKWLKMKL 25
ML V+P RI+IHE++ W K+ L
Sbjct: 241 MLIVNPLNRISIHEIMQDDWFKVDL 265
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 90.9 bits (224), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 89/188 (47%), Gaps = 20/188 (10%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE + L HP++++L E Y+V E G ++ EI++R +SE A+
Sbjct: 70 REVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR----FSEHDAAR 125
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
++QV + Y H+++I+HRD+KP +LL +KE +K+ FG++ Q
Sbjct: 126 IIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-------- 177
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSRD-RL 232
TK RIGT +Y+APEV+ Y + D+W PF G + +
Sbjct: 178 ------TKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDI 230
Query: 233 FQSITKGK 240
+ + GK
Sbjct: 231 LKRVETGK 238
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 90.9 bits (224), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 89/188 (47%), Gaps = 20/188 (10%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE + L HP++++L E Y+V E G ++ EI++R +SE A+
Sbjct: 70 REVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR----FSEHDAAR 125
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
++QV + Y H+++I+HRD+KP +LL +KE +K+ FG++ Q
Sbjct: 126 IIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-------- 177
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSRD-RL 232
TK RIGT +Y+APEV+ Y + D+W PF G + +
Sbjct: 178 ------TKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDI 230
Query: 233 FQSITKGK 240
+ + GK
Sbjct: 231 LKRVETGK 238
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 90.9 bits (224), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 93/199 (46%), Gaps = 23/199 (11%)
Query: 47 TTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVY 106
T+ L RE I +L HP++V+L E +E LY+V EY G ++ +V
Sbjct: 56 TSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRM---- 111
Query: 107 SEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQ 166
E A RQ++ A++YCH+ I+HRD+K +LL N +K+ FG + +
Sbjct: 112 KEKEARAKFRQIVSAVQYCHQKYIVHRDLKAENLLLDGDMN---IKIADFGFSNEF---- 164
Query: 167 LYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKP-VDIWXXXXXXXXXXXXXXPF 225
+ G +LD + G+P Y APE+ + +KY P VD+W PF
Sbjct: 165 ---TVGNKLDTFC-------GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 214
Query: 226 VGSR-DRLFQSITKGKLHI 243
G L + + +GK I
Sbjct: 215 DGQNLKELRERVLRGKYRI 233
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 90.5 bits (223), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 104/229 (45%), Gaps = 24/229 (10%)
Query: 17 NHKWLKMKLHTSAEIEPASFGLPDERLNHYTTEADLKREATICHMLKHPHVVELLETYSS 76
N +K+ H E A + +LN + + L RE I +L HP++V+L E +
Sbjct: 26 NFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQK-LFREVRIMKVLNHPNIVKLFEVIET 84
Query: 77 EGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIK 136
E LY+V EY G ++ +V E A RQ++ A++YCH+ I+HRD+K
Sbjct: 85 EKTLYLVMEYASGGEVFDYLVAHGRM----KEKEARAKFRQIVSAVQYCHQKFIVHRDLK 140
Query: 137 PHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEV 196
+LL N +K+ FG + + + G +LD + G+P Y APE+
Sbjct: 141 AENLLLDADMN---IKIADFGFSNEF-------TFGNKLDEFC-------GSPPYAAPEL 183
Query: 197 IEDQKYGKP-VDIWXXXXXXXXXXXXXXPFVGSR-DRLFQSITKGKLHI 243
+ +KY P VD+W PF G L + + +GK I
Sbjct: 184 FQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI 232
Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 1 MLSVDPNKRITIHEVINHKWLKMKLHTSAEIEPASFGLPD 40
L ++P+KR T+ +++ +W+ + H E++P LPD
Sbjct: 247 FLILNPSKRGTLEQIMKDRWMNVG-HEDDELKPYVEPLPD 285
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 90.5 bits (223), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 94/199 (47%), Gaps = 23/199 (11%)
Query: 47 TTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVY 106
T+ L RE I +L HP++V+L E +E LY++ EY G ++ +V
Sbjct: 53 TSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRM---- 108
Query: 107 SEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQ 166
E A RQ++ A++YCH+ I+HRD+K +LL N +K+ FG + +
Sbjct: 109 KEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMN---IKIADFGFSNE----- 160
Query: 167 LYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKP-VDIWXXXXXXXXXXXXXXPF 225
+ GG +LD + G+P Y APE+ + +KY P VD+W PF
Sbjct: 161 -FTVGG-KLDTFC-------GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 211
Query: 226 VGSR-DRLFQSITKGKLHI 243
G L + + +GK I
Sbjct: 212 DGQNLKELRERVLRGKYRI 230
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 104/229 (45%), Gaps = 24/229 (10%)
Query: 17 NHKWLKMKLHTSAEIEPASFGLPDERLNHYTTEADLKREATICHMLKHPHVVELLETYSS 76
N +K+ H E A + +LN + + L RE I +L HP++V+L E +
Sbjct: 26 NFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQK-LFREVRIMKVLNHPNIVKLFEVIET 84
Query: 77 EGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIK 136
E LY+V EY G ++ +V E A RQ++ A++YCH+ I+HRD+K
Sbjct: 85 EKTLYLVMEYASGGEVFDYLVAHGRM----KEKEARAKFRQIVSAVQYCHQKFIVHRDLK 140
Query: 137 PHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEV 196
+LL N +K+ FG + + + G +LD + G+P Y APE+
Sbjct: 141 AENLLLDADMN---IKIADFGFSNEF-------TFGNKLDTFC-------GSPPYAAPEL 183
Query: 197 IEDQKYGKP-VDIWXXXXXXXXXXXXXXPFVGSR-DRLFQSITKGKLHI 243
+ +KY P VD+W PF G L + + +GK I
Sbjct: 184 FQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI 232
Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 1 MLSVDPNKRITIHEVINHKWLKMKLHTSAEIEPASFGLPD 40
L ++P+KR T+ +++ +W+ + H E++P LPD
Sbjct: 247 FLILNPSKRGTLEQIMKDRWMNVG-HEDDELKPYVEPLPD 285
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 104/229 (45%), Gaps = 24/229 (10%)
Query: 17 NHKWLKMKLHTSAEIEPASFGLPDERLNHYTTEADLKREATICHMLKHPHVVELLETYSS 76
N +K+ H E A + +LN + + L RE I +L HP++V+L E +
Sbjct: 26 NFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQK-LFREVRIMKVLNHPNIVKLFEVIET 84
Query: 77 EGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIK 136
E LY+V EY G ++ +V E A RQ++ A++YCH+ I+HRD+K
Sbjct: 85 EKTLYLVMEYASGGEVFDYLVAHGRM----KEKEARAKFRQIVSAVQYCHQKFIVHRDLK 140
Query: 137 PHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEV 196
+LL N +K+ FG + + + G +LD + G+P Y APE+
Sbjct: 141 AENLLLDADMN---IKIADFGFSNEF-------TFGNKLDTFC-------GSPPYAAPEL 183
Query: 197 IEDQKYGKP-VDIWXXXXXXXXXXXXXXPFVGSR-DRLFQSITKGKLHI 243
+ +KY P VD+W PF G L + + +GK I
Sbjct: 184 FQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI 232
Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 1 MLSVDPNKRITIHEVINHKWLKMKLHTSAEIEPASFGLPD 40
L ++P+KR T+ +++ +W+ + H E++P LPD
Sbjct: 247 FLILNPSKRGTLEQIMKDRWMNVG-HEDDELKPYVEPLPD 285
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 104/229 (45%), Gaps = 24/229 (10%)
Query: 17 NHKWLKMKLHTSAEIEPASFGLPDERLNHYTTEADLKREATICHMLKHPHVVELLETYSS 76
N +K+ H E A + +LN + + L RE I +L HP++V+L E +
Sbjct: 26 NFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQK-LFREVRIMKVLNHPNIVKLFEVIET 84
Query: 77 EGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIK 136
E LY+V EY G ++ +V E A RQ++ A++YCH+ I+HRD+K
Sbjct: 85 EKTLYLVMEYASGGEVFDYLVAHGRM----KEKEARAKFRQIVSAVQYCHQKFIVHRDLK 140
Query: 137 PHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEV 196
+LL N +K+ FG + + + G +LD + G+P Y APE+
Sbjct: 141 AENLLLDADMN---IKIADFGFSNEF-------TFGNKLDTFC-------GSPPYAAPEL 183
Query: 197 IEDQKYGKP-VDIWXXXXXXXXXXXXXXPFVGSR-DRLFQSITKGKLHI 243
+ +KY P VD+W PF G L + + +GK I
Sbjct: 184 FQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI 232
Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 1 MLSVDPNKRITIHEVINHKWLKMKLHTSAEIEPASFGLPD 40
L ++P+KR T+ +++ +W+ + H E++P LPD
Sbjct: 247 FLILNPSKRGTLEQIMKDRWMNVG-HEDDELKPYVAPLPD 285
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 93/199 (46%), Gaps = 23/199 (11%)
Query: 47 TTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVY 106
T+ L RE I +L HP++V+L E +E LY++ EY G ++ +V
Sbjct: 56 TSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRM---- 111
Query: 107 SEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQ 166
E A RQ++ A++YCH+ I+HRD+K +LL N +K+ FG + +
Sbjct: 112 KEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMN---IKIADFGFSNE----- 163
Query: 167 LYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKP-VDIWXXXXXXXXXXXXXXPF 225
+ GG +LD + G P Y APE+ + +KY P VD+W PF
Sbjct: 164 -FTVGG-KLDAFC-------GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 214
Query: 226 VGSR-DRLFQSITKGKLHI 243
G L + + +GK I
Sbjct: 215 DGQNLKELRERVLRGKYRI 233
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 103/229 (44%), Gaps = 24/229 (10%)
Query: 17 NHKWLKMKLHTSAEIEPASFGLPDERLNHYTTEADLKREATICHMLKHPHVVELLETYSS 76
N +K+ H E A + +LN + + L RE I +L HP++V+L E +
Sbjct: 26 NFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQK-LFREVRIMKVLNHPNIVKLFEVIET 84
Query: 77 EGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIK 136
E LY+V EY G ++ +V E A RQ++ A++YCH+ I+HRD+K
Sbjct: 85 EKTLYLVMEYASGGEVFDYLVAHGRM----KEKEARAKFRQIVSAVQYCHQKFIVHRDLK 140
Query: 137 PHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEV 196
+LL N +K+ FG + + + G +LD + G P Y APE+
Sbjct: 141 AENLLLDADMN---IKIADFGFSNEF-------TFGNKLDAFC-------GAPPYAAPEL 183
Query: 197 IEDQKYGKP-VDIWXXXXXXXXXXXXXXPFVGSR-DRLFQSITKGKLHI 243
+ +KY P VD+W PF G L + + +GK I
Sbjct: 184 FQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI 232
Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 1 MLSVDPNKRITIHEVINHKWLKMKLHTSAEIEPASFGLPD 40
L ++P+KR T+ +++ +W+ + H E++P LPD
Sbjct: 247 FLILNPSKRGTLEQIMKDRWMNVG-HEDDELKPYVEPLPD 285
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 107/229 (46%), Gaps = 24/229 (10%)
Query: 17 NHKWLKMKLHTSAEIEPASFGLPDERLNHYTTEADLKREATICHMLKHPHVVELLETYSS 76
N +K+ H E A + +LN + + L RE I +L HP++V+L E +
Sbjct: 19 NFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQK-LFREVRIMKVLNHPNIVKLFEVIET 77
Query: 77 EGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIK 136
E LY+V EY G ++ +V G++ E A RQ++ A++YCH+ I+HRD+K
Sbjct: 78 EKTLYLVMEYASGGEVFDYLV---AHGWM-KEKEARAKFRQIVSAVQYCHQKFIVHRDLK 133
Query: 137 PHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEV 196
+LL N +K+ FG + + + G +LD + G+P Y APE+
Sbjct: 134 AENLLLDADMN---IKIADFGFSNEF-------TFGNKLDTFC-------GSPPYAAPEL 176
Query: 197 IEDQKYGKP-VDIWXXXXXXXXXXXXXXPFVGSR-DRLFQSITKGKLHI 243
+ +KY P VD+W PF G L + + +GK I
Sbjct: 177 FQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI 225
Score = 28.5 bits (62), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 1 MLSVDPNKRITIHEVINHKWLKMKLHTSAEIEPASFGLPD 40
L ++P+KR T+ +++ +W+ + H E++P LPD
Sbjct: 240 FLILNPSKRGTLEQIMKDRWMNVG-HEDDELKPYVEPLPD 278
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 103/229 (44%), Gaps = 24/229 (10%)
Query: 17 NHKWLKMKLHTSAEIEPASFGLPDERLNHYTTEADLKREATICHMLKHPHVVELLETYSS 76
N +K+ H E A + +LN + + L RE I +L HP++V+L E +
Sbjct: 26 NFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQK-LFREVRIXKVLNHPNIVKLFEVIET 84
Query: 77 EGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIK 136
E LY+V EY G ++ +V E A RQ++ A++YCH+ I+HRD+K
Sbjct: 85 EKTLYLVXEYASGGEVFDYLVAHGRX----KEKEARAKFRQIVSAVQYCHQKFIVHRDLK 140
Query: 137 PHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEV 196
+LL N +K+ FG + + + G +LD + G P Y APE+
Sbjct: 141 AENLLLDADXN---IKIADFGFSNEF-------TFGNKLDAFC-------GAPPYAAPEL 183
Query: 197 IEDQKYGKP-VDIWXXXXXXXXXXXXXXPFVGSR-DRLFQSITKGKLHI 243
+ +KY P VD+W PF G L + + +GK I
Sbjct: 184 FQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRI 232
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 79/157 (50%), Gaps = 18/157 (11%)
Query: 53 KREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVAS 112
+RE + +KHP++V+ E++ G LY+V +Y +G D+ I A G ++ E
Sbjct: 71 RREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRI--NAQKGVLFQEDQIL 128
Query: 113 HYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGG 172
+ Q+ AL++ H+ I+HRDIK + L V+LG FG+A
Sbjct: 129 DWFVQICLALKHVHDRKILHRDIKSQNIFLT---KDGTVQLGDFGIA------------- 172
Query: 173 ERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
L+ A IGTP+Y++PE+ E++ Y DIW
Sbjct: 173 RVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIW 209
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 85/182 (46%), Gaps = 18/182 (9%)
Query: 52 LKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVA 111
++ E + L HP++++L E + + + +V E + G ++ IV + YSE A
Sbjct: 95 VRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKG----YYSERDA 150
Query: 112 SHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSG 171
+ ++Q+LEA+ Y HEN I+HRD+KP +L A AP+K+ FG++
Sbjct: 151 ADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLS------------ 198
Query: 172 GERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSRDR 231
++ + GTP Y APE++ YG VD+W PF R
Sbjct: 199 --KIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGD 256
Query: 232 LF 233
F
Sbjct: 257 QF 258
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 87.4 bits (215), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 93/208 (44%), Gaps = 23/208 (11%)
Query: 38 LPDERLNHYTTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIV 97
L +++ +KRE + +HPH+++L + S+ +MV EY+ G ++ I
Sbjct: 44 LNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYIC 103
Query: 98 RRATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFG 157
+ E A +Q+L A+ YCH + ++HRD+KP VLL N+ K+ FG
Sbjct: 104 KHGRV----EEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNA---KIADFG 156
Query: 158 VAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKP-VDIWXXXXXXX 216
++ + DG+ + G+P+Y APEVI + Y P VDIW
Sbjct: 157 LSNMMSDGEFLRTS--------------CGSPNYAAPEVISGRLYAGPEVDIWSCGVILY 202
Query: 217 XXXXXXXPFVGSR-DRLFQSITKGKLHI 243
PF LF+ I G +I
Sbjct: 203 ALLCGTLPFDDEHVPTLFKKIRGGVFYI 230
Score = 31.2 bits (69), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 16/25 (64%)
Query: 1 MLSVDPNKRITIHEVINHKWLKMKL 25
ML VDP KR TI ++ H+W K L
Sbjct: 245 MLQVDPLKRATIKDIREHEWFKQDL 269
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 92/208 (44%), Gaps = 23/208 (11%)
Query: 38 LPDERLNHYTTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIV 97
L +++ +KRE + +HPH+++L + S+ +MV EY+ G ++ I
Sbjct: 44 LNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYIC 103
Query: 98 RRATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFG 157
+ E A +Q+L A+ YCH + ++HRD+KP VLL N+ K+ FG
Sbjct: 104 KHGRV----EEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNA---KIADFG 156
Query: 158 VAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKP-VDIWXXXXXXX 216
++ + DG+ G+P+Y APEVI + Y P VDIW
Sbjct: 157 LSNMMSDGEFLRDS--------------CGSPNYAAPEVISGRLYAGPEVDIWSCGVILY 202
Query: 217 XXXXXXXPFVGSR-DRLFQSITKGKLHI 243
PF LF+ I G +I
Sbjct: 203 ALLCGTLPFDDEHVPTLFKKIRGGVFYI 230
Score = 31.2 bits (69), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 16/25 (64%)
Query: 1 MLSVDPNKRITIHEVINHKWLKMKL 25
ML VDP KR TI ++ H+W K L
Sbjct: 245 MLQVDPLKRATIKDIREHEWFKQDL 269
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 87/168 (51%), Gaps = 33/168 (19%)
Query: 54 REATI--CHMLK----HPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYS 107
REAT H+L+ HPH++ L+++Y S +++VF+ M E+ T S
Sbjct: 143 REATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKG----ELFDYLTEKVALS 198
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQL 167
E MR +LEA+ + H N+I+HRD+KP +LL +++ ++L FG + L+ G+
Sbjct: 199 EKETRSIMRSLLEAVSFLHANNIVHRDLKPENILL---DDNMQIRLSDFGFSCHLEPGE- 254
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIE---DQK---YGKPVDIW 209
K GTP Y+APE+++ D+ YGK VD+W
Sbjct: 255 -------------KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLW 289
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 95/199 (47%), Gaps = 29/199 (14%)
Query: 50 ADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEA 109
A K E I +KHP +V+L+ + + G LY++ EY+ G ++ ++ R ++ E
Sbjct: 66 AHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREG----IFMED 121
Query: 110 VASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQ-LQDGQL- 167
A Y+ ++ AL + H+ II+RD+KP ++L ++ + VKL FG+ + + DG +
Sbjct: 122 TACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGH---VKLTDFGLCKESIHDGTVT 178
Query: 168 --YCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPF 225
+C GT YMAPE++ + + VD W PF
Sbjct: 179 HXFC-----------------GTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPF 221
Query: 226 VG-SRDRLFQSITKGKLHI 243
G +R + I K KL++
Sbjct: 222 TGENRKKTIDKILKCKLNL 240
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 95/199 (47%), Gaps = 29/199 (14%)
Query: 50 ADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEA 109
A K E I +KHP +V+L+ + + G LY++ EY+ G ++ ++ R ++ E
Sbjct: 66 AHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREG----IFMED 121
Query: 110 VASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQ-LQDGQL- 167
A Y+ ++ AL + H+ II+RD+KP ++L ++ + VKL FG+ + + DG +
Sbjct: 122 TACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGH---VKLTDFGLCKESIHDGTVT 178
Query: 168 --YCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPF 225
+C GT YMAPE++ + + VD W PF
Sbjct: 179 HTFC-----------------GTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPF 221
Query: 226 VG-SRDRLFQSITKGKLHI 243
G +R + I K KL++
Sbjct: 222 TGENRKKTIDKILKCKLNL 240
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 79/159 (49%), Gaps = 22/159 (13%)
Query: 52 LKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVA 111
++RE + +HPH+++L + S+ ++MV EY+ G ++ I + E +
Sbjct: 63 IRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGR----LDEKES 118
Query: 112 SHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSG 171
+Q+L + YCH + ++HRD+KP VLL N+ K+ FG++ + DG+
Sbjct: 119 RRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNA---KIADFGLSNMMSDGEFLRXS 175
Query: 172 GERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKP-VDIW 209
G+P+Y APEVI + Y P VDIW
Sbjct: 176 --------------CGSPNYAAPEVISGRLYAGPEVDIW 200
Score = 32.0 bits (71), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 16/25 (64%)
Query: 1 MLSVDPNKRITIHEVINHKWLKMKL 25
ML VDP KR TI ++ H+W K L
Sbjct: 250 MLQVDPMKRATIKDIREHEWFKQDL 274
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 84/177 (47%), Gaps = 15/177 (8%)
Query: 52 LKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVA 111
++ E + L HP+++++ E + +Y+V E +G ++ IV G SE
Sbjct: 67 IEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYV 126
Query: 112 SHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSG 171
+ M+Q++ AL Y H ++H+D+KP +L + +P+K+ FG+A +L+ S
Sbjct: 127 AELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLA------ELFKS- 179
Query: 172 GERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGS 228
D ++T A GT YMAPEV + K DIW PF G+
Sbjct: 180 ----DEHSTNAA---GTALYMAPEVFKRDVTFK-CDIWSAGVVMYFLLTGCLPFTGT 228
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 89/206 (43%), Gaps = 27/206 (13%)
Query: 48 TEAD---LKREATICHMLKHPHVVELLETY--SSEGMLYMVFEYMDGSDICFEIVRRATA 102
TEA+ L E + LKHP++V + + LY+V EY +G D+ I +
Sbjct: 45 TEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKE 104
Query: 103 GFVYSEAVASHYMRQVLEALRYCHEND-----IIHRDIKPHCVLLANKENSAPVKLGGFG 157
E M Q+ AL+ CH ++HRD+KP V L K+N VKLG FG
Sbjct: 105 RQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQN---VKLGDFG 161
Query: 158 VAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXX 217
+A L+H T+ A +GTP+YM+PE + Y + DIW
Sbjct: 162 LA-------------RILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYE 208
Query: 218 XXXXXXPFVG-SRDRLFQSITKGKLH 242
PF S+ L I +GK
Sbjct: 209 LCALMPPFTAFSQKELAGKIREGKFR 234
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 89/206 (43%), Gaps = 27/206 (13%)
Query: 48 TEAD---LKREATICHMLKHPHVVELLETY--SSEGMLYMVFEYMDGSDICFEIVRRATA 102
TEA+ L E + LKHP++V + + LY+V EY +G D+ I +
Sbjct: 45 TEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKE 104
Query: 103 GFVYSEAVASHYMRQVLEALRYCHEND-----IIHRDIKPHCVLLANKENSAPVKLGGFG 157
E M Q+ AL+ CH ++HRD+KP V L K+N VKLG FG
Sbjct: 105 RQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQN---VKLGDFG 161
Query: 158 VAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXX 217
+A L+H T+ A +GTP+YM+PE + Y + DIW
Sbjct: 162 LA-------------RILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYE 208
Query: 218 XXXXXXPFVG-SRDRLFQSITKGKLH 242
PF S+ L I +GK
Sbjct: 209 LCALMPPFTAFSQKELAGKIREGKFR 234
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 82/159 (51%), Gaps = 23/159 (14%)
Query: 52 LKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVA 111
++RE + +L+HPH+++L + ++ + MV EY G + + ++ +E
Sbjct: 56 VEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYAGGELFDYIVEKKRM-----TEDEG 110
Query: 112 SHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSG 171
+ +Q++ A+ YCH + I+HRD+KP +LL + N VK+ FG++ + DG +
Sbjct: 111 RRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLN---VKIADFGLSNIMTDGNFLKTS 167
Query: 172 GERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKP-VDIW 209
G+P+Y APEVI + Y P VD+W
Sbjct: 168 --------------CGSPNYAAPEVINGKLYAGPEVDVW 192
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 80.9 bits (198), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 83/183 (45%), Gaps = 27/183 (14%)
Query: 49 EADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSE 108
EA LK + + HP++++L +TY + ++VF+ M ++ + + T SE
Sbjct: 55 EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTL----SE 110
Query: 109 AVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLY 168
MR +LE + H+ +I+HRD+KP +LL + N +KL FG + QL G+
Sbjct: 111 KETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMN---IKLTDFGFSCQLDPGE-- 165
Query: 169 CSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQK------YGKPVDIWXXXXXXXXXXXXX 222
K GTP Y+APE+IE YGK VD+W
Sbjct: 166 ------------KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGS 213
Query: 223 XPF 225
PF
Sbjct: 214 PPF 216
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 83/183 (45%), Gaps = 27/183 (14%)
Query: 49 EADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSE 108
EA LK + + HP++++L +TY + ++VF+ M ++ + + T SE
Sbjct: 68 EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT----LSE 123
Query: 109 AVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLY 168
MR +LE + H+ +I+HRD+KP +LL + N +KL FG + QL G+
Sbjct: 124 KETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMN---IKLTDFGFSCQLDPGE-- 178
Query: 169 CSGGERLDHYTTKAGHRIGTPHYMAPEVIE------DQKYGKPVDIWXXXXXXXXXXXXX 222
K GTP Y+APE+IE YGK VD+W
Sbjct: 179 ------------KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGS 226
Query: 223 XPF 225
PF
Sbjct: 227 PPF 229
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 80.5 bits (197), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 83/183 (45%), Gaps = 27/183 (14%)
Query: 49 EADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSE 108
EA LK + + HP++++L +TY + ++VF+ M ++ + + T SE
Sbjct: 68 EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT----LSE 123
Query: 109 AVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLY 168
MR +LE + H+ +I+HRD+KP +LL + N +KL FG + QL G+
Sbjct: 124 KETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMN---IKLTDFGFSCQLDPGE-- 178
Query: 169 CSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQK------YGKPVDIWXXXXXXXXXXXXX 222
K GTP Y+APE+IE YGK VD+W
Sbjct: 179 ------------KLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGS 226
Query: 223 XPF 225
PF
Sbjct: 227 PPF 229
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 89/178 (50%), Gaps = 19/178 (10%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
+++RE +I + HP+++ L + Y + + ++ E + G ++ F+ + + + SE
Sbjct: 61 EIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGEL-FDFLAQKES---LSEEE 116
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAP-VKLGGFGVAIQLQDGQLYC 169
A+ +++Q+L+ + Y H I H D+KP ++L +K P +KL FG+A +++DG
Sbjct: 117 ATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG---- 172
Query: 170 SGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVG 227
+ + GTP ++APE++ + G D+W PF+G
Sbjct: 173 ----------VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 220
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 84/190 (44%), Gaps = 24/190 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E I + P +V+L ++ LYMV EYM G D+ F +RR +SE A Y
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDM-FSHLRRIGR---FSEPHARFY 146
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
Q++ Y H D+I+RD+KP +L+ + +K+ FG A +++
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIKVADFGFAKRVK----------- 192
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSRD-RLF 233
+ GTP Y+APE+I + Y K VD W PF + +++
Sbjct: 193 -----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 234 QSITKGKLHI 243
+ I GK+
Sbjct: 248 EKIVSGKVRF 257
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 84/190 (44%), Gaps = 24/190 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E I + P +V+L ++ LYMV EYM G D+ F +RR +SE A Y
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDM-FSHLRRIGR---FSEPHARFY 146
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
Q++ Y H D+I+RD+KP +L+ + +K+ FG A +++
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIKVADFGFAKRVK----------- 192
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSRD-RLF 233
+ GTP Y+APE+I + Y K VD W PF + +++
Sbjct: 193 -----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 234 QSITKGKLHI 243
+ I GK+
Sbjct: 248 EKIVSGKVRF 257
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 91/215 (42%), Gaps = 41/215 (19%)
Query: 5 DPNKRITIHEVINHK-----WLKMKLHTSAEIEPASFGLPDERLNHYTTEADLKREATIC 59
DP K+ T E I + M + T E+ + + K+E I
Sbjct: 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVA----------IRQMNLQQQPKKELIIN 66
Query: 60 HML-----KHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
+L K+P++V L++Y L++V EY+ G + + E +
Sbjct: 67 EILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC-----MDEGQIAAV 121
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
R+ L+AL + H N +IHRDIK +LL VKL FG Q+ Q
Sbjct: 122 CRECLQALEFLHSNQVIHRDIKSDNILLGM---DGSVKLTDFGFCAQITPEQ-------- 170
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+K +GTP++MAPEV+ + YG VDIW
Sbjct: 171 -----SKRSEMVGTPYWMAPEVVTRKAYGPKVDIW 200
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 87/206 (42%), Gaps = 27/206 (13%)
Query: 48 TEAD---LKREATICHMLKHPHVVELLETY--SSEGMLYMVFEYMDGSDICFEIVRRATA 102
TEA+ L E + LKHP++V + + LY+V EY +G D+ I +
Sbjct: 45 TEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKE 104
Query: 103 GFVYSEAVASHYMRQVLEALRYCHEND-----IIHRDIKPHCVLLANKENSAPVKLGGFG 157
E M Q+ AL+ CH ++HRD+KP V L K+N VKLG FG
Sbjct: 105 RQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQN---VKLGDFG 161
Query: 158 VAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXX 217
+A L+H A +GTP+YM+PE + Y + DIW
Sbjct: 162 LA-------------RILNHDEDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYE 208
Query: 218 XXXXXXPFVG-SRDRLFQSITKGKLH 242
PF S+ L I +GK
Sbjct: 209 LCALMPPFTAFSQKELAGKIREGKFR 234
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 91/215 (42%), Gaps = 41/215 (19%)
Query: 5 DPNKRITIHEVINHK-----WLKMKLHTSAEIEPASFGLPDERLNHYTTEADLKREATIC 59
DP K+ T E I + M + T E+ + + K+E I
Sbjct: 18 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVA----------IRQMNLQQQPKKELIIN 67
Query: 60 HML-----KHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
+L K+P++V L++Y L++V EY+ G + + E +
Sbjct: 68 EILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC-----MDEGQIAAV 122
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
R+ L+AL + H N +IHRDIK +LL VKL FG Q+ Q
Sbjct: 123 CRECLQALEFLHSNQVIHRDIKSDNILLGM---DGSVKLTDFGFCAQITPEQ-------- 171
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+K +GTP++MAPEV+ + YG VDIW
Sbjct: 172 -----SKRSXMVGTPYWMAPEVVTRKAYGPKVDIW 201
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 91/215 (42%), Gaps = 41/215 (19%)
Query: 5 DPNKRITIHEVINHK-----WLKMKLHTSAEIEPASFGLPDERLNHYTTEADLKREATIC 59
DP K+ T E I + M + T E+ + + K+E I
Sbjct: 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVA----------IRQMNLQQQPKKELIIN 66
Query: 60 HML-----KHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
+L K+P++V L++Y L++V EY+ G + + E +
Sbjct: 67 EILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC-----MDEGQIAAV 121
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
R+ L+AL + H N +IHRDIK +LL VKL FG Q+ Q
Sbjct: 122 CRECLQALEFLHSNQVIHRDIKSDNILLGM---DGSVKLTDFGFCAQITPEQ-------- 170
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+K +GTP++MAPEV+ + YG VDIW
Sbjct: 171 -----SKRSXMVGTPYWMAPEVVTRKAYGPKVDIW 200
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 91/215 (42%), Gaps = 41/215 (19%)
Query: 5 DPNKRITIHEVINHK-----WLKMKLHTSAEIEPASFGLPDERLNHYTTEADLKREATIC 59
DP K+ T E I + M + T E+ + + K+E I
Sbjct: 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVA----------IRQMNLQQQPKKELIIN 66
Query: 60 HML-----KHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
+L K+P++V L++Y L++V EY+ G + + E +
Sbjct: 67 EILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC-----MDEGQIAAV 121
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
R+ L+AL + H N +IHRDIK +LL VKL FG Q+ Q
Sbjct: 122 CRECLQALEFLHSNQVIHRDIKSDNILLGM---DGSVKLTDFGFCAQITPEQ-------- 170
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+K +GTP++MAPEV+ + YG VDIW
Sbjct: 171 -----SKRSTMVGTPYWMAPEVVTRKAYGPKVDIW 200
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 29/187 (15%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E+ + +HP + L + + L V EY +G ++ F + R V++E A Y
Sbjct: 55 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER----VFTEERARFY 110
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQ-LQDG---QLYCS 170
+++ AL Y H D+++RDIK ++L + +K+ FG+ + + DG + +C
Sbjct: 111 GAEIVSALEYLHSRDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKXFC- 166
Query: 171 GGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSR- 229
GTP Y+APEV+ED YG+ VD W PF
Sbjct: 167 ----------------GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH 210
Query: 230 DRLFQSI 236
+RLF+ I
Sbjct: 211 ERLFELI 217
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 29/187 (15%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E+ + +HP + L + + L V EY +G ++ F + R V++E A Y
Sbjct: 55 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER----VFTEERARFY 110
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQ-LQDG---QLYCS 170
+++ AL Y H D+++RDIK ++L + +K+ FG+ + + DG + +C
Sbjct: 111 GAEIVSALEYLHSRDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKTFC- 166
Query: 171 GGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSR- 229
GTP Y+APEV+ED YG+ VD W PF
Sbjct: 167 ----------------GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH 210
Query: 230 DRLFQSI 236
+RLF+ I
Sbjct: 211 ERLFELI 217
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 29/187 (15%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E+ + +HP + L + + L V EY +G ++ F + R V++E A Y
Sbjct: 55 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER----VFTEERARFY 110
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQ-LQDG---QLYCS 170
+++ AL Y H D+++RDIK ++L + +K+ FG+ + + DG + +C
Sbjct: 111 GAEIVSALEYLHSRDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKXFC- 166
Query: 171 GGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSR- 229
GTP Y+APEV+ED YG+ VD W PF
Sbjct: 167 ----------------GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH 210
Query: 230 DRLFQSI 236
+RLF+ I
Sbjct: 211 ERLFELI 217
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 29/187 (15%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E+ + +HP + L + + L V EY +G ++ F + R V++E A Y
Sbjct: 58 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER----VFTEERARFY 113
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQ-LQDG---QLYCS 170
+++ AL Y H D+++RDIK ++L + +K+ FG+ + + DG + +C
Sbjct: 114 GAEIVSALEYLHSRDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKTFC- 169
Query: 171 GGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSR- 229
GTP Y+APEV+ED YG+ VD W PF
Sbjct: 170 ----------------GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH 213
Query: 230 DRLFQSI 236
+RLF+ I
Sbjct: 214 ERLFELI 220
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 29/187 (15%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E+ + +HP + L + + L V EY +G ++ F + R V++E A Y
Sbjct: 55 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER----VFTEERARFY 110
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQ-LQDG---QLYCS 170
+++ AL Y H D+++RDIK ++L + +K+ FG+ + + DG + +C
Sbjct: 111 GAEIVSALEYLHSRDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKTFC- 166
Query: 171 GGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSR- 229
GTP Y+APEV+ED YG+ VD W PF
Sbjct: 167 ----------------GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH 210
Query: 230 DRLFQSI 236
+RLF+ I
Sbjct: 211 ERLFELI 217
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 29/187 (15%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E+ + +HP + L + + L V EY +G ++ F + R V++E A Y
Sbjct: 55 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER----VFTEERARFY 110
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQ-LQDG---QLYCS 170
+++ AL Y H D+++RDIK ++L + +K+ FG+ + + DG + +C
Sbjct: 111 GAEIVSALEYLHSRDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKXFC- 166
Query: 171 GGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSR- 229
GTP Y+APEV+ED YG+ VD W PF
Sbjct: 167 ----------------GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH 210
Query: 230 DRLFQSI 236
+RLF+ I
Sbjct: 211 ERLFELI 217
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 96/214 (44%), Gaps = 35/214 (16%)
Query: 40 DERLNHYTTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRR 99
DE ++ TE + +A+ HP +V L + +E L+ V EY++G D+ F + R+
Sbjct: 61 DEDIDWVQTEKHVFEQAS-----NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ 115
Query: 100 ATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVA 159
E A Y ++ AL Y HE II+RD+K VLL ++ +KL +G+
Sbjct: 116 RK----LPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL---DSEGHIKLTDYGM- 167
Query: 160 IQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXX 219
C G R T+ GTP+Y+APE++ + YG VD W
Sbjct: 168 ---------CKEGLRPGDTTSXF---CGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMM 215
Query: 220 XXXXPF--VGSRDR--------LFQSITKGKLHI 243
PF VGS D LFQ I + ++ I
Sbjct: 216 AGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRI 249
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 29/187 (15%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E+ + +HP + L + + L V EY +G ++ F + R V++E A Y
Sbjct: 60 ESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRER----VFTEERARFY 115
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQ-LQDG---QLYCS 170
+++ AL Y H D+++RDIK ++L + +K+ FG+ + + DG + +C
Sbjct: 116 GAEIVSALEYLHSRDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKXFC- 171
Query: 171 GGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSR- 229
GTP Y+APEV+ED YG+ VD W PF
Sbjct: 172 ----------------GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH 215
Query: 230 DRLFQSI 236
+RLF+ I
Sbjct: 216 ERLFELI 222
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 96/214 (44%), Gaps = 35/214 (16%)
Query: 40 DERLNHYTTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRR 99
DE ++ TE + +A+ HP +V L + +E L+ V EY++G D+ F + R+
Sbjct: 93 DEDIDWVQTEKHVFEQAS-----NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ 147
Query: 100 ATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVA 159
E A Y ++ AL Y HE II+RD+K VLL ++ +KL +G+
Sbjct: 148 RK----LPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL---DSEGHIKLTDYGM- 199
Query: 160 IQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXX 219
C G R T+ GTP+Y+APE++ + YG VD W
Sbjct: 200 ---------CKEGLRPGDTTSTF---CGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMM 247
Query: 220 XXXXPF--VGSRDR--------LFQSITKGKLHI 243
PF VGS D LFQ I + ++ I
Sbjct: 248 AGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRI 281
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 96/214 (44%), Gaps = 35/214 (16%)
Query: 40 DERLNHYTTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRR 99
DE ++ TE + +A+ HP +V L + +E L+ V EY++G D+ F + R+
Sbjct: 46 DEDIDWVQTEKHVFEQAS-----NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ 100
Query: 100 ATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVA 159
E A Y ++ AL Y HE II+RD+K VLL ++ +KL +G+
Sbjct: 101 RK----LPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL---DSEGHIKLTDYGM- 152
Query: 160 IQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXX 219
C G R T+ GTP+Y+APE++ + YG VD W
Sbjct: 153 ---------CKEGLRPGDTTSXF---CGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMM 200
Query: 220 XXXXPF--VGSRDR--------LFQSITKGKLHI 243
PF VGS D LFQ I + ++ I
Sbjct: 201 AGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRI 234
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 96/214 (44%), Gaps = 35/214 (16%)
Query: 40 DERLNHYTTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRR 99
DE ++ TE + +A+ HP +V L + +E L+ V EY++G D+ F + R+
Sbjct: 50 DEDIDWVQTEKHVFEQAS-----NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ 104
Query: 100 ATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVA 159
E A Y ++ AL Y HE II+RD+K VLL ++ +KL +G+
Sbjct: 105 RK----LPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL---DSEGHIKLTDYGM- 156
Query: 160 IQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXX 219
C G R T+ GTP+Y+APE++ + YG VD W
Sbjct: 157 ---------CKEGLRPGDTTSXF---CGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMM 204
Query: 220 XXXXPF--VGSRDR--------LFQSITKGKLHI 243
PF VGS D LFQ I + ++ I
Sbjct: 205 AGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRI 238
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 88/180 (48%), Gaps = 18/180 (10%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
++K E ++ + L H ++++L + + S+ + +V EY+DG ++ I+ + + +E
Sbjct: 132 EVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDES---YNLTELD 188
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCS 170
+M+Q+ E +R+ H+ I+H D+KP +L N++ + +K+ FG+A + + +
Sbjct: 189 TILFMKQICEGIRHMHQMYILHLDLKPENILCVNRD-AKQIKIIDFGLARRYKPRE---- 243
Query: 171 GGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSRD 230
K GTP ++APEV+ P D+W PF+G D
Sbjct: 244 ----------KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDND 293
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 86/191 (45%), Gaps = 26/191 (13%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E + ++ HP ++ + T+ ++M+ +Y++G ++ F ++R++ + VA Y
Sbjct: 56 ERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGEL-FSLLRKSQR---FPNPVAKFY 111
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
+V AL Y H DII+RD+KP +LL + + +K+ FG A
Sbjct: 112 AAEVCLALEYLHSKDIIYRDLKPENILL---DKNGHIKITDFGFA--------------- 153
Query: 175 LDHYTTKAGHRI-GTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSRD-RL 232
Y + + GTP Y+APEV+ + Y K +D W PF S +
Sbjct: 154 --KYVPDVTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKT 211
Query: 233 FQSITKGKLHI 243
++ I +L
Sbjct: 212 YEKILNAELRF 222
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 89/188 (47%), Gaps = 22/188 (11%)
Query: 43 LNHYTTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATA 102
L+ YT +K E +I + L HP ++ L + + + + ++ E++ G ++ R A
Sbjct: 90 LDKYT----VKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGEL---FDRIAAE 142
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
+ SEA +YMRQ E L++ HE+ I+H DIKP ++ K+ S+ VK+ FG+A +L
Sbjct: 143 DYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASS-VKIIDFGLATKL 201
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXX 222
++ TT T + APE+++ + G D+W
Sbjct: 202 NPDEIV--------KVTT------ATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGL 247
Query: 223 XPFVGSRD 230
PF G D
Sbjct: 248 SPFAGEDD 255
Score = 30.8 bits (68), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 16/22 (72%)
Query: 1 MLSVDPNKRITIHEVINHKWLK 22
+L +P KR+T+H+ + H WLK
Sbjct: 288 LLQKEPRKRLTVHDALEHPWLK 309
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 79/157 (50%), Gaps = 21/157 (13%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE + L+H ++V LLE + Y+VFE++D + + + G Y V
Sbjct: 73 REIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHT--ILDDLELFPNGLDYQ--VVQK 128
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y+ Q++ + +CH ++IIHRDIKP +L++ S VKL FG A L + GE
Sbjct: 129 YLFQIINGIGFCHSHNIIHRDIKPENILVS---QSGVVKLCDFGFARTL------AAPGE 179
Query: 174 RLDHYTTKAGHRIGTPHYMAPE-VIEDQKYGKPVDIW 209
D + T Y APE ++ D KYGK VD+W
Sbjct: 180 VYD-------DEVATRWYRAPELLVGDVKYGKAVDVW 209
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 79/191 (41%), Gaps = 16/191 (8%)
Query: 48 TEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYS 107
AD +E + L HP+V++ ++ + L +V E D D+ I +
Sbjct: 75 ARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIP 134
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQL 167
E Y Q+ AL + H ++HRDIKP V + + VKLG G+ G+
Sbjct: 135 ERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITA---TGVVKLGDLGL------GRF 185
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVG 227
+ S TT A +GTP+YM+PE I + Y DIW PF G
Sbjct: 186 FSSK-------TTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYG 238
Query: 228 SRDRLFQSITK 238
+ L+ K
Sbjct: 239 DKMNLYSLCKK 249
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 90/199 (45%), Gaps = 24/199 (12%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
+++ E I L HP ++++ + +E Y+V E M+G E+ + EA
Sbjct: 200 NVETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGG----ELFDKVVGNKRLKEAT 254
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCS 170
Y Q+L A++Y HEN IIHRD+KP VLL+++E +K+ FG + L
Sbjct: 255 CKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-------- 306
Query: 171 GGERLDHYTTKAGHRIGTPHYMAPEV---IEDQKYGKPVDIWXXXXXXXXXXXXXXPFVG 227
GE T+ GTP Y+APEV + Y + VD W PF
Sbjct: 307 -GE-----TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 360
Query: 228 SRDR--LFQSITKGKLHIL 244
R + L IT GK + +
Sbjct: 361 HRTQVSLKDQITSGKYNFI 379
Score = 28.1 bits (61), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 18/44 (40%), Gaps = 5/44 (11%)
Query: 1 MLSVDPNKRITIHEVINHKWL-----KMKLHTSAEIEPASFGLP 39
+L VDP R T E + H WL K K E S LP
Sbjct: 397 LLVVDPKARFTTEEALRHPWLQDEDMKRKFQDLLSEENESTALP 440
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 76/162 (46%), Gaps = 26/162 (16%)
Query: 53 KREATICHML-----KHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYS 107
K+E I +L K+P++V L++Y L++V EY+ G + +
Sbjct: 61 KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC-----MD 115
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQL 167
E + R+ L+AL + H N +IHR+IK +LL VKL FG Q+ Q
Sbjct: 116 EGQIAAVCRECLQALEFLHSNQVIHRNIKSDNILLGM---DGSVKLTDFGFCAQITPEQ- 171
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+K +GTP++MAPEV+ + YG VDIW
Sbjct: 172 ------------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIW 201
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 90/199 (45%), Gaps = 24/199 (12%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
+++ E I L HP ++++ + +E Y+V E M+G E+ + EA
Sbjct: 186 NVETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGG----ELFDKVVGNKRLKEAT 240
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCS 170
Y Q+L A++Y HEN IIHRD+KP VLL+++E +K+ FG + L
Sbjct: 241 CKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-------- 292
Query: 171 GGERLDHYTTKAGHRIGTPHYMAPEV---IEDQKYGKPVDIWXXXXXXXXXXXXXXPFVG 227
GE T+ GTP Y+APEV + Y + VD W PF
Sbjct: 293 -GE-----TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 346
Query: 228 SRDR--LFQSITKGKLHIL 244
R + L IT GK + +
Sbjct: 347 HRTQVSLKDQITSGKYNFI 365
Score = 28.1 bits (61), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 1 MLSVDPNKRITIHEVINHKWLK 22
+L VDP R T E + H WL+
Sbjct: 383 LLVVDPKARFTTEEALRHPWLQ 404
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 74/157 (47%), Gaps = 21/157 (13%)
Query: 53 KREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVAS 112
++E T+ P++ +Y L+++ EY+ G ++++ E +
Sbjct: 65 QQEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGS-ALDLLKPGP----LEETYIA 119
Query: 113 HYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGG 172
+R++L+ L Y H IHRDIK VLL+ + + VKL FGVA QL D Q+
Sbjct: 120 TILREILKGLDYLHSERKIHRDIKAANVLLSEQGD---VKLADFGVAGQLTDTQI----- 171
Query: 173 ERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
K +GTP +MAPEVI+ Y DIW
Sbjct: 172 --------KRNXFVGTPFWMAPEVIKQSAYDFKADIW 200
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 75/157 (47%), Gaps = 21/157 (13%)
Query: 53 KREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVAS 112
++E T+ +V + +Y L+++ EY+ G +++R + E +
Sbjct: 69 QQEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGS-ALDLLRAGP----FDEFQIA 123
Query: 113 HYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGG 172
++++L+ L Y H IHRDIK VLL+ + + VKL FGVA QL D Q+
Sbjct: 124 TMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGD---VKLADFGVAGQLTDTQI----- 175
Query: 173 ERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
K +GTP +MAPEVI+ Y DIW
Sbjct: 176 --------KRNTFVGTPFWMAPEVIQQSAYDSKADIW 204
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 89/199 (44%), Gaps = 24/199 (12%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
+++ E I L HP ++++ + +E Y+V E M+G E+ + EA
Sbjct: 61 NVETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGG----ELFDKVVGNKRLKEAT 115
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCS 170
Y Q+L A++Y HEN IIHRD+KP VLL+++E +K+ FG + L + L +
Sbjct: 116 CKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT 175
Query: 171 GGERLDHYTTKAGHRIGTPHYMAPEV---IEDQKYGKPVDIWXXXXXXXXXXXXXXPFVG 227
GTP Y+APEV + Y + VD W PF
Sbjct: 176 --------------LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 221
Query: 228 SRDR--LFQSITKGKLHIL 244
R + L IT GK + +
Sbjct: 222 HRTQVSLKDQITSGKYNFI 240
Score = 28.1 bits (61), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 1 MLSVDPNKRITIHEVINHKWLK 22
+L VDP R T E + H WL+
Sbjct: 258 LLVVDPKARFTTEEALRHPWLQ 279
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 89/199 (44%), Gaps = 24/199 (12%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
+++ E I L HP ++++ + +E Y+V E M+G E+ + EA
Sbjct: 60 NVETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGG----ELFDKVVGNKRLKEAT 114
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCS 170
Y Q+L A++Y HEN IIHRD+KP VLL+++E +K+ FG + L + L +
Sbjct: 115 CKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT 174
Query: 171 GGERLDHYTTKAGHRIGTPHYMAPEV---IEDQKYGKPVDIWXXXXXXXXXXXXXXPFVG 227
GTP Y+APEV + Y + VD W PF
Sbjct: 175 --------------LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 220
Query: 228 SRDR--LFQSITKGKLHIL 244
R + L IT GK + +
Sbjct: 221 HRTQVSLKDQITSGKYNFI 239
Score = 28.5 bits (62), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 1 MLSVDPNKRITIHEVINHKWLK 22
+L VDP R T E + H WL+
Sbjct: 257 LLVVDPKARFTTEEALRHPWLQ 278
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 89/199 (44%), Gaps = 24/199 (12%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
+++ E I L HP ++++ + +E Y+V E M+G E+ + EA
Sbjct: 61 NVETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGG----ELFDKVVGNKRLKEAT 115
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCS 170
Y Q+L A++Y HEN IIHRD+KP VLL+++E +K+ FG + L + L +
Sbjct: 116 CKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT 175
Query: 171 GGERLDHYTTKAGHRIGTPHYMAPEV---IEDQKYGKPVDIWXXXXXXXXXXXXXXPFVG 227
GTP Y+APEV + Y + VD W PF
Sbjct: 176 --------------LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 221
Query: 228 SRDR--LFQSITKGKLHIL 244
R + L IT GK + +
Sbjct: 222 HRTQVSLKDQITSGKYNFI 240
Score = 28.5 bits (62), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 1 MLSVDPNKRITIHEVINHKWLK 22
+L VDP R T E + H WL+
Sbjct: 258 LLVVDPKARFTTEEALRHPWLQ 279
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 89/199 (44%), Gaps = 24/199 (12%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
+++ E I L HP ++++ + +E Y+V E M+G E+ + EA
Sbjct: 61 NVETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGG----ELFDKVVGNKRLKEAT 115
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCS 170
Y Q+L A++Y HEN IIHRD+KP VLL+++E +K+ FG + L + L +
Sbjct: 116 CKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT 175
Query: 171 GGERLDHYTTKAGHRIGTPHYMAPEV---IEDQKYGKPVDIWXXXXXXXXXXXXXXPFVG 227
GTP Y+APEV + Y + VD W PF
Sbjct: 176 --------------LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 221
Query: 228 SRDR--LFQSITKGKLHIL 244
R + L IT GK + +
Sbjct: 222 HRTQVSLKDQITSGKYNFI 240
Score = 28.1 bits (61), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 1 MLSVDPNKRITIHEVINHKWLK 22
+L VDP R T E + H WL+
Sbjct: 258 LLVVDPKARFTTEEALRHPWLQ 279
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 89/199 (44%), Gaps = 24/199 (12%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
+++ E I L HP ++++ + +E Y+V E M+G E+ + EA
Sbjct: 67 NVETEIEILKKLNHPCIIKIKNFFDAEDY-YIVLELMEGG----ELFDKVVGNKRLKEAT 121
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCS 170
Y Q+L A++Y HEN IIHRD+KP VLL+++E +K+ FG + L + L +
Sbjct: 122 CKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRT 181
Query: 171 GGERLDHYTTKAGHRIGTPHYMAPEV---IEDQKYGKPVDIWXXXXXXXXXXXXXXPFVG 227
GTP Y+APEV + Y + VD W PF
Sbjct: 182 --------------LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSE 227
Query: 228 SRDR--LFQSITKGKLHIL 244
R + L IT GK + +
Sbjct: 228 HRTQVSLKDQITSGKYNFI 246
Score = 28.5 bits (62), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 1 MLSVDPNKRITIHEVINHKWLK 22
+L VDP R T E + H WL+
Sbjct: 264 LLVVDPKARFTTEEALRHPWLQ 285
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 88/182 (48%), Gaps = 19/182 (10%)
Query: 47 TTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVY 106
+ +++RE I ++HP+++ L + + ++ + ++ E + G ++ + + +
Sbjct: 57 VSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES----L 112
Query: 107 SEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAP-VKLGGFGVAIQLQDG 165
+E A+ +++Q+L+ + Y H I H D+KP ++L +K P +KL FG+A +++ G
Sbjct: 113 TEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG 172
Query: 166 QLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPF 225
+ + GTP ++APE++ + G D+W PF
Sbjct: 173 NEF--------------KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
Query: 226 VG 227
+G
Sbjct: 219 LG 220
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 73/157 (46%), Gaps = 21/157 (13%)
Query: 53 KREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVAS 112
++E T+ P+V + +Y + L+++ EY+ G +++ E +
Sbjct: 73 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGS-ALDLLEPGP----LDETQIA 127
Query: 113 HYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGG 172
+R++L+ L Y H IHRDIK VLL+ VKL FGVA QL D Q+
Sbjct: 128 TILREILKGLDYLHSEKKIHRDIKAANVLLSE---HGEVKLADFGVAGQLTDTQI----- 179
Query: 173 ERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
K +GTP +MAPEVI+ Y DIW
Sbjct: 180 --------KRNTFVGTPFWMAPEVIKQSAYDSKADIW 208
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 83/161 (51%), Gaps = 29/161 (18%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE + LKHP++V LLE + + L++VFEY D + + E+ R Y V H
Sbjct: 51 REIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHT-VLHELDR-------YQRGVPEH 102
Query: 114 YMR----QVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYC 169
++ Q L+A+ +CH+++ IHRD+KP +L+ + +KL FG A L
Sbjct: 103 LVKSITWQTLQAVNFCHKHNCIHRDVKPENILIT---KHSVIKLCDFGFARLLTGPS--- 156
Query: 170 SGGERLDHYTTKAGHRIGTPHYMAPE-VIEDQKYGKPVDIW 209
D+Y + + T Y +PE ++ D +YG PVD+W
Sbjct: 157 ------DYYDDE----VATRWYRSPELLVGDTQYGPPVDVW 187
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 73/157 (46%), Gaps = 21/157 (13%)
Query: 53 KREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVAS 112
++E T+ P+V + +Y + L+++ EY+ G +++ E +
Sbjct: 68 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGS-ALDLLEPGP----LDETQIA 122
Query: 113 HYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGG 172
+R++L+ L Y H IHRDIK VLL+ VKL FGVA QL D Q+
Sbjct: 123 TILREILKGLDYLHSEKKIHRDIKAANVLLSE---HGEVKLADFGVAGQLTDTQI----- 174
Query: 173 ERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
K +GTP +MAPEVI+ Y DIW
Sbjct: 175 --------KRNXFVGTPFWMAPEVIKQSAYDSKADIW 203
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 88/182 (48%), Gaps = 19/182 (10%)
Query: 47 TTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVY 106
+ +++RE I ++HP+++ L + + ++ + ++ E + G ++ + + +
Sbjct: 71 VSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES----L 126
Query: 107 SEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAP-VKLGGFGVAIQLQDG 165
+E A+ +++Q+L+ + Y H I H D+KP ++L +K P +KL FG+A +++ G
Sbjct: 127 TEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG 186
Query: 166 QLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPF 225
+ + GTP ++APE++ + G D+W PF
Sbjct: 187 NEF--------------KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 232
Query: 226 VG 227
+G
Sbjct: 233 LG 234
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 73/157 (46%), Gaps = 21/157 (13%)
Query: 53 KREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVAS 112
++E T+ P+V + +Y + L+++ EY+ G +++ E +
Sbjct: 53 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGS-ALDLLEPGP----LDETQIA 107
Query: 113 HYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGG 172
+R++L+ L Y H IHRDIK VLL+ VKL FGVA QL D Q+
Sbjct: 108 TILREILKGLDYLHSEKKIHRDIKAANVLLSE---HGEVKLADFGVAGQLTDTQI----- 159
Query: 173 ERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
K +GTP +MAPEVI+ Y DIW
Sbjct: 160 --------KRNXFVGTPFWMAPEVIKQSAYDSKADIW 188
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 73/157 (46%), Gaps = 21/157 (13%)
Query: 53 KREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVAS 112
++E T+ P+V + +Y + L+++ EY+ G +++ E +
Sbjct: 53 QQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGS-ALDLLEPGP----LDETQIA 107
Query: 113 HYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGG 172
+R++L+ L Y H IHRDIK VLL+ VKL FGVA QL D Q+
Sbjct: 108 TILREILKGLDYLHSEKKIHRDIKAANVLLSE---HGEVKLADFGVAGQLTDTQI----- 159
Query: 173 ERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
K +GTP +MAPEVI+ Y DIW
Sbjct: 160 --------KRNTFVGTPFWMAPEVIKQSAYDSKADIW 188
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 88/182 (48%), Gaps = 19/182 (10%)
Query: 47 TTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVY 106
+ +++RE I ++HP+++ L + + ++ + ++ E + G ++ + + +
Sbjct: 50 VSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES----L 105
Query: 107 SEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAP-VKLGGFGVAIQLQDG 165
+E A+ +++Q+L+ + Y H I H D+KP ++L +K P +KL FG+A +++ G
Sbjct: 106 TEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAG 165
Query: 166 QLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPF 225
+ + GTP ++APE++ + G D+W PF
Sbjct: 166 NEF--------------KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 211
Query: 226 VG 227
+G
Sbjct: 212 LG 213
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 89/182 (48%), Gaps = 19/182 (10%)
Query: 47 TTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVY 106
+ +++RE +I + H +V+ L + Y + + ++ E + G ++ F+ + + +
Sbjct: 57 VSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGEL-FDFLAQKES---L 112
Query: 107 SEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAP-VKLGGFGVAIQLQDG 165
SE A+ +++Q+L+ + Y H I H D+KP ++L +K P +KL FG+A +++DG
Sbjct: 113 SEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG 172
Query: 166 QLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPF 225
+ + GTP ++APE++ + G D+W PF
Sbjct: 173 --------------VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
Query: 226 VG 227
+G
Sbjct: 219 LG 220
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 89/182 (48%), Gaps = 19/182 (10%)
Query: 47 TTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVY 106
+ +++RE +I + H +V+ L + Y + + ++ E + G ++ F+ + + +
Sbjct: 57 VSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGEL-FDFLAQKES---L 112
Query: 107 SEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAP-VKLGGFGVAIQLQDG 165
SE A+ +++Q+L+ + Y H I H D+KP ++L +K P +KL FG+A +++DG
Sbjct: 113 SEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG 172
Query: 166 QLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPF 225
+ + GTP ++APE++ + G D+W PF
Sbjct: 173 --------------VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
Query: 226 VG 227
+G
Sbjct: 219 LG 220
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 80/165 (48%), Gaps = 25/165 (15%)
Query: 49 EADLKREATICHMLKHPHVVELLETY----SSEGMLYMVFEYMDGSDICFEIVRRATAGF 104
E +L A+ C PH+V +++ Y + L +V E +DG ++ I R F
Sbjct: 104 EVELHWRASQC-----PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAF 158
Query: 105 VYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQD 164
+E AS M+ + EA++Y H +I HRD+KP +L +K +A +KL FG A
Sbjct: 159 --TEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA----- 211
Query: 165 GQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
E H + TP+Y+APEV+ +KY K D+W
Sbjct: 212 -------KETTSHNSLTTP--CYTPYYVAPEVLGPEKYDKSCDMW 247
Score = 28.9 bits (63), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 7/35 (20%)
Query: 1 MLSVDPNKRITIHEVINHKWL-------KMKLHTS 28
+L +P +R+TI E +NH W+ + LHTS
Sbjct: 305 LLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 339
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 88/182 (48%), Gaps = 19/182 (10%)
Query: 47 TTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVY 106
+ +++RE +I + H +V+ L + Y + + ++ E + G ++ + ++ +
Sbjct: 57 VSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES----L 112
Query: 107 SEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAP-VKLGGFGVAIQLQDG 165
SE A+ +++Q+L+ + Y H I H D+KP ++L +K P +KL FG+A +++DG
Sbjct: 113 SEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG 172
Query: 166 QLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPF 225
+ + GTP ++APE++ + G D+W PF
Sbjct: 173 --------------VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
Query: 226 VG 227
+G
Sbjct: 219 LG 220
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 89/182 (48%), Gaps = 19/182 (10%)
Query: 47 TTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVY 106
+ +++RE +I + H +V+ L + Y + + ++ E + G ++ F+ + + +
Sbjct: 57 VSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGEL-FDFLAQKES---L 112
Query: 107 SEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAP-VKLGGFGVAIQLQDG 165
SE A+ +++Q+L+ + Y H I H D+KP ++L +K P +KL FG+A +++DG
Sbjct: 113 SEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG 172
Query: 166 QLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPF 225
+ + GTP ++APE++ + G D+W PF
Sbjct: 173 --------------VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
Query: 226 VG 227
+G
Sbjct: 219 LG 220
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 89/182 (48%), Gaps = 19/182 (10%)
Query: 47 TTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVY 106
+ +++RE +I + H +V+ L + Y + + ++ E + G ++ F+ + + +
Sbjct: 57 VSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGEL-FDFLAQKES---L 112
Query: 107 SEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAP-VKLGGFGVAIQLQDG 165
SE A+ +++Q+L+ + Y H I H D+KP ++L +K P +KL FG+A +++DG
Sbjct: 113 SEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG 172
Query: 166 QLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPF 225
+ + GTP ++APE++ + G D+W PF
Sbjct: 173 --------------VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 218
Query: 226 VG 227
+G
Sbjct: 219 LG 220
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 84/186 (45%), Gaps = 18/186 (9%)
Query: 45 HYTTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGF 104
H + + +++E +L+HP +V L + + + + M++E+M G ++ FE V A
Sbjct: 88 HESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGEL-FEKV--ADEHN 144
Query: 105 VYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQD 164
SE A YMRQV + L + HEN+ +H D+KP ++ K S +KL FG+ L
Sbjct: 145 KMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKR-SNELKLIDFGLTAHLDP 203
Query: 165 GQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXP 224
Q + K GT + APEV E + G D+W P
Sbjct: 204 KQ------------SVKV--TTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSP 249
Query: 225 FVGSRD 230
F G D
Sbjct: 250 FGGEND 255
Score = 31.6 bits (70), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 15/21 (71%)
Query: 1 MLSVDPNKRITIHEVINHKWL 21
+L DPN R+TIH+ + H WL
Sbjct: 288 LLLADPNTRMTIHQALEHPWL 308
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 80/165 (48%), Gaps = 25/165 (15%)
Query: 49 EADLKREATICHMLKHPHVVELLETY----SSEGMLYMVFEYMDGSDICFEIVRRATAGF 104
E +L A+ C PH+V +++ Y + L +V E +DG ++ I R F
Sbjct: 110 EVELHWRASQC-----PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAF 164
Query: 105 VYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQD 164
+E AS M+ + EA++Y H +I HRD+KP +L +K +A +KL FG A
Sbjct: 165 --TEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA----- 217
Query: 165 GQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
E H + TP+Y+APEV+ +KY K D+W
Sbjct: 218 -------KETTSHNSLTTP--CYTPYYVAPEVLGPEKYDKSCDMW 253
Score = 28.9 bits (63), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 7/35 (20%)
Query: 1 MLSVDPNKRITIHEVINHKWL-------KMKLHTS 28
+L +P +R+TI E +NH W+ + LHTS
Sbjct: 311 LLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 345
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 80/165 (48%), Gaps = 25/165 (15%)
Query: 49 EADLKREATICHMLKHPHVVELLETY----SSEGMLYMVFEYMDGSDICFEIVRRATAGF 104
E +L A+ C PH+V +++ Y + L +V E +DG ++ I R F
Sbjct: 60 EVELHWRASQC-----PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAF 114
Query: 105 VYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQD 164
+E AS M+ + EA++Y H +I HRD+KP +L +K +A +KL FG A
Sbjct: 115 --TEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA----- 167
Query: 165 GQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
E H + TP+Y+APEV+ +KY K D+W
Sbjct: 168 -------KETTSHNSLTTP--CYTPYYVAPEVLGPEKYDKSCDMW 203
Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 7/35 (20%)
Query: 1 MLSVDPNKRITIHEVINHKWL-------KMKLHTS 28
+L +P +R+TI E +NH W+ + LHTS
Sbjct: 261 LLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 295
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 80/165 (48%), Gaps = 25/165 (15%)
Query: 49 EADLKREATICHMLKHPHVVELLETY----SSEGMLYMVFEYMDGSDICFEIVRRATAGF 104
E +L A+ C PH+V +++ Y + L +V E +DG ++ I R F
Sbjct: 60 EVELHWRASQC-----PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAF 114
Query: 105 VYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQD 164
+E AS M+ + EA++Y H +I HRD+KP +L +K +A +KL FG A
Sbjct: 115 --TEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA----- 167
Query: 165 GQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
E H + TP+Y+APEV+ +KY K D+W
Sbjct: 168 -------KETTSHNSLTTP--CYTPYYVAPEVLGPEKYDKSCDMW 203
Score = 28.9 bits (63), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 7/35 (20%)
Query: 1 MLSVDPNKRITIHEVINHKWL-------KMKLHTS 28
+L +P +R+TI E +NH W+ + LHTS
Sbjct: 261 LLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 295
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 80/165 (48%), Gaps = 25/165 (15%)
Query: 49 EADLKREATICHMLKHPHVVELLETY----SSEGMLYMVFEYMDGSDICFEIVRRATAGF 104
E +L A+ C PH+V +++ Y + L +V E +DG ++ I R F
Sbjct: 66 EVELHWRASQC-----PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAF 120
Query: 105 VYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQD 164
+E AS M+ + EA++Y H +I HRD+KP +L +K +A +KL FG A
Sbjct: 121 --TEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA----- 173
Query: 165 GQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
E H + TP+Y+APEV+ +KY K D+W
Sbjct: 174 -------KETTSHNSLTTP--CYTPYYVAPEVLGPEKYDKSCDMW 209
Score = 28.9 bits (63), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 7/35 (20%)
Query: 1 MLSVDPNKRITIHEVINHKWL-------KMKLHTS 28
+L +P +R+TI E +NH W+ + LHTS
Sbjct: 267 LLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 301
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 80/165 (48%), Gaps = 25/165 (15%)
Query: 49 EADLKREATICHMLKHPHVVELLETY----SSEGMLYMVFEYMDGSDICFEIVRRATAGF 104
E +L A+ C PH+V +++ Y + L +V E +DG ++ I R F
Sbjct: 64 EVELHWRASQC-----PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAF 118
Query: 105 VYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQD 164
+E AS M+ + EA++Y H +I HRD+KP +L +K +A +KL FG A
Sbjct: 119 --TEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA----- 171
Query: 165 GQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
E H + TP+Y+APEV+ +KY K D+W
Sbjct: 172 -------KETTSHNSLTTP--CYTPYYVAPEVLGPEKYDKSCDMW 207
Score = 28.9 bits (63), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 7/35 (20%)
Query: 1 MLSVDPNKRITIHEVINHKWL-------KMKLHTS 28
+L +P +R+TI E +NH W+ + LHTS
Sbjct: 265 LLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 299
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 80/165 (48%), Gaps = 25/165 (15%)
Query: 49 EADLKREATICHMLKHPHVVELLETY----SSEGMLYMVFEYMDGSDICFEIVRRATAGF 104
E +L A+ C PH+V +++ Y + L +V E +DG ++ I R F
Sbjct: 65 EVELHWRASQC-----PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAF 119
Query: 105 VYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQD 164
+E AS M+ + EA++Y H +I HRD+KP +L +K +A +KL FG A
Sbjct: 120 --TEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA----- 172
Query: 165 GQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
E H + TP+Y+APEV+ +KY K D+W
Sbjct: 173 -------KETTSHNSLTTP--CYTPYYVAPEVLGPEKYDKSCDMW 208
Score = 28.9 bits (63), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 7/35 (20%)
Query: 1 MLSVDPNKRITIHEVINHKWL-------KMKLHTS 28
+L +P +R+TI E +NH W+ + LHTS
Sbjct: 266 LLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 300
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 84/186 (45%), Gaps = 18/186 (9%)
Query: 45 HYTTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGF 104
H + + +++E +L+HP +V L + + + + M++E+M G ++ FE V A
Sbjct: 194 HESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGEL-FEKV--ADEHN 250
Query: 105 VYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQD 164
SE A YMRQV + L + HEN+ +H D+KP ++ K S +KL FG+ L
Sbjct: 251 KMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKR-SNELKLIDFGLTAHLDP 309
Query: 165 GQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXP 224
Q TT GT + APEV E + G D+W P
Sbjct: 310 KQSV--------KVTT------GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSP 355
Query: 225 FVGSRD 230
F G D
Sbjct: 356 FGGEND 361
Score = 31.6 bits (70), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 15/21 (71%)
Query: 1 MLSVDPNKRITIHEVINHKWL 21
+L DPN R+TIH+ + H WL
Sbjct: 394 LLLADPNTRMTIHQALEHPWL 414
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 80/165 (48%), Gaps = 25/165 (15%)
Query: 49 EADLKREATICHMLKHPHVVELLETY----SSEGMLYMVFEYMDGSDICFEIVRRATAGF 104
E +L A+ C PH+V +++ Y + L +V E +DG ++ I R F
Sbjct: 59 EVELHWRASQC-----PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAF 113
Query: 105 VYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQD 164
+E AS M+ + EA++Y H +I HRD+KP +L +K +A +KL FG A
Sbjct: 114 --TEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA----- 166
Query: 165 GQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
E H + TP+Y+APEV+ +KY K D+W
Sbjct: 167 -------KETTSHNSLTTP--CYTPYYVAPEVLGPEKYDKSCDMW 202
Score = 28.9 bits (63), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 7/35 (20%)
Query: 1 MLSVDPNKRITIHEVINHKWL-------KMKLHTS 28
+L +P +R+TI E +NH W+ + LHTS
Sbjct: 260 LLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 294
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 80/165 (48%), Gaps = 25/165 (15%)
Query: 49 EADLKREATICHMLKHPHVVELLETY----SSEGMLYMVFEYMDGSDICFEIVRRATAGF 104
E +L A+ C PH+V +++ Y + L +V E +DG ++ I R F
Sbjct: 58 EVELHWRASQC-----PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAF 112
Query: 105 VYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQD 164
+E AS M+ + EA++Y H +I HRD+KP +L +K +A +KL FG A
Sbjct: 113 --TEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA----- 165
Query: 165 GQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
E H + TP+Y+APEV+ +KY K D+W
Sbjct: 166 -------KETTSHNSLTTP--CYTPYYVAPEVLGPEKYDKSCDMW 201
Score = 28.9 bits (63), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 7/35 (20%)
Query: 1 MLSVDPNKRITIHEVINHKWL-------KMKLHTS 28
+L +P +R+TI E +NH W+ + LHTS
Sbjct: 259 LLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 293
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 80/165 (48%), Gaps = 25/165 (15%)
Query: 49 EADLKREATICHMLKHPHVVELLETY----SSEGMLYMVFEYMDGSDICFEIVRRATAGF 104
E +L A+ C PH+V +++ Y + L +V E +DG ++ I R F
Sbjct: 74 EVELHWRASQC-----PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAF 128
Query: 105 VYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQD 164
+E AS M+ + EA++Y H +I HRD+KP +L +K +A +KL FG A
Sbjct: 129 --TEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA----- 181
Query: 165 GQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
E H + TP+Y+APEV+ +KY K D+W
Sbjct: 182 -------KETTSHNSLTTP--CYTPYYVAPEVLGPEKYDKSCDMW 217
Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 7/35 (20%)
Query: 1 MLSVDPNKRITIHEVINHKWL-------KMKLHTS 28
+L +P +R+TI E +NH W+ + LHTS
Sbjct: 275 LLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 309
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 84/190 (44%), Gaps = 24/190 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E I + P +V+L ++ LYMV EY+ G ++ F +RR +SE A Y
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM-FSHLRRIGR---FSEPHARFY 146
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
Q++ Y H D+I+RD+KP +L+ + +K+ FG A +++
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIKVADFGFAKRVK----------- 192
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSRD-RLF 233
+ GTP Y+APE+I + Y K VD W PF + +++
Sbjct: 193 -----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 234 QSITKGKLHI 243
+ I GK+
Sbjct: 248 EKIVSGKVRF 257
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 87/182 (47%), Gaps = 19/182 (10%)
Query: 47 TTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVY 106
+ D++RE +I ++HP+V+ L E Y ++ + ++ E + G ++ + + +
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES----L 111
Query: 107 SEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAP-VKLGGFGVAIQLQDG 165
+E A+ +++Q+L + Y H I H D+KP ++L ++ P +K+ FG+A ++ G
Sbjct: 112 TEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG 171
Query: 166 QLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPF 225
+ + GTP ++APE++ + G D+W PF
Sbjct: 172 NEF--------------KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
Query: 226 VG 227
+G
Sbjct: 218 LG 219
Score = 28.9 bits (63), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 1 MLSVDPNKRITIHEVINHKWLK 22
+L DP KR+TI + + H W+K
Sbjct: 255 LLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 79/165 (47%), Gaps = 25/165 (15%)
Query: 49 EADLKREATICHMLKHPHVVELLETY----SSEGMLYMVFEYMDGSDICFEIVRRATAGF 104
E +L A+ C PH+V +++ Y + L +V E +DG ++ I R F
Sbjct: 58 EVELHWRASQC-----PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAF 112
Query: 105 VYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQD 164
+E AS M+ + EA++Y H +I HRD+KP +L +K +A +KL FG A
Sbjct: 113 --TEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA----- 165
Query: 165 GQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
E H TP+Y+APEV+ +KY K D+W
Sbjct: 166 -------KETTSH--NSLTEPCYTPYYVAPEVLGPEKYDKSCDMW 201
Score = 28.9 bits (63), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 7/35 (20%)
Query: 1 MLSVDPNKRITIHEVINHKWL-------KMKLHTS 28
+L +P +R+TI E +NH W+ + LHTS
Sbjct: 259 LLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 293
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 74/149 (49%), Gaps = 21/149 (14%)
Query: 65 PHVVELLETYSS----EGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLE 120
PH+V +L+ Y + + L ++ E M+G ++ I R F +E A+ MR +
Sbjct: 63 PHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAF--TEREAAEIMRDIGT 120
Query: 121 ALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTT 180
A+++ H ++I HRD+KP +L +KE A +KL FG A + L
Sbjct: 121 AIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTP---------- 170
Query: 181 KAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
TP+Y+APEV+ +KY K D+W
Sbjct: 171 -----CYTPYYVAPEVLGPEKYDKSCDMW 194
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 1 MLSVDPNKRITIHEVINHKWLKMKL 25
+L DP +R+TI + +NH W+ +
Sbjct: 252 LLKTDPTERLTITQFMNHPWINQSM 276
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 86/178 (48%), Gaps = 19/178 (10%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
D++RE +I ++HP+V+ L E Y ++ + ++ E + G ++ + + + +E
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES----LTEEE 115
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAP-VKLGGFGVAIQLQDGQLYC 169
A+ +++Q+L + Y H I H D+KP ++L ++ P +K+ FG+A ++ G +
Sbjct: 116 ATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF- 174
Query: 170 SGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVG 227
+ GTP ++APE++ + G D+W PF+G
Sbjct: 175 -------------KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 1 MLSVDPNKRITIHEVINHKWLKMK 24
+L DP KR+TI + + H W+K K
Sbjct: 255 LLVKDPKKRMTIQDSLQHPWIKPK 278
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 86/178 (48%), Gaps = 19/178 (10%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
D++RE +I ++HP+V+ L E Y ++ + ++ E + G ++ + + + +E
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES----LTEEE 115
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAP-VKLGGFGVAIQLQDGQLYC 169
A+ +++Q+L + Y H I H D+KP ++L ++ P +K+ FG+A ++ G +
Sbjct: 116 ATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF- 174
Query: 170 SGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVG 227
+ GTP ++APE++ + G D+W PF+G
Sbjct: 175 -------------KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 1 MLSVDPNKRITIHEVINHKWLKMK 24
+L DP KR+TI + + H W+K K
Sbjct: 255 LLVKDPKKRMTIQDSLQHPWIKPK 278
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 86/178 (48%), Gaps = 19/178 (10%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
D++RE +I ++HP+V+ L E Y ++ + ++ E + G ++ + + + +E
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES----LTEEE 115
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAP-VKLGGFGVAIQLQDGQLYC 169
A+ +++Q+L + Y H I H D+KP ++L ++ P +K+ FG+A ++ G +
Sbjct: 116 ATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF- 174
Query: 170 SGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVG 227
+ GTP ++APE++ + G D+W PF+G
Sbjct: 175 -------------KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 1 MLSVDPNKRITIHEVINHKWLKMK 24
+L DP KR+TI + + H W+K K
Sbjct: 255 LLVKDPKKRMTIQDSLQHPWIKPK 278
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 87/182 (47%), Gaps = 19/182 (10%)
Query: 47 TTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVY 106
+ D++RE +I ++HP+V+ L E Y ++ + ++ E + G ++ + + +
Sbjct: 56 VSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES----L 111
Query: 107 SEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAP-VKLGGFGVAIQLQDG 165
+E A+ +++Q+L + Y H I H D+KP ++L ++ P +K+ FG+A ++ G
Sbjct: 112 TEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG 171
Query: 166 QLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPF 225
+ + GTP ++APE++ + G D+W PF
Sbjct: 172 NEF--------------KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
Query: 226 VG 227
+G
Sbjct: 218 LG 219
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 1 MLSVDPNKRITIHEVINHKWLKMK 24
+L DP KR+TI + + H W+K K
Sbjct: 255 LLVKDPKKRMTIQDSLQHPWIKPK 278
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 86/178 (48%), Gaps = 19/178 (10%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
D++RE +I ++HP+V+ L E Y ++ + ++ E + G ++ + + + +E
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES----LTEEE 115
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAP-VKLGGFGVAIQLQDGQLYC 169
A+ +++Q+L + Y H I H D+KP ++L ++ P +K+ FG+A ++ G +
Sbjct: 116 ATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF- 174
Query: 170 SGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVG 227
+ GTP ++APE++ + G D+W PF+G
Sbjct: 175 -------------KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 1 MLSVDPNKRITIHEVINHKWLKMK 24
+L DP KR+TI + + H W+K K
Sbjct: 255 LLVKDPKKRMTIQDSLQHPWIKPK 278
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 86/178 (48%), Gaps = 19/178 (10%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
D++RE +I ++HP+V+ L E Y ++ + ++ E + G ++ + + + +E
Sbjct: 59 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES----LTEEE 114
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAP-VKLGGFGVAIQLQDGQLYC 169
A+ +++Q+L + Y H I H D+KP ++L ++ P +K+ FG+A ++ G +
Sbjct: 115 ATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF- 173
Query: 170 SGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVG 227
+ GTP ++APE++ + G D+W PF+G
Sbjct: 174 -------------KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 218
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 1 MLSVDPNKRITIHEVINHKWLKMK 24
+L DP KR+TI + + H W+K K
Sbjct: 254 LLVKDPKKRMTIQDSLQHPWIKPK 277
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 86/178 (48%), Gaps = 19/178 (10%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
D++RE +I ++HP+V+ L E Y ++ + ++ E + G ++ + + + +E
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES----LTEEE 115
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAP-VKLGGFGVAIQLQDGQLYC 169
A+ +++Q+L + Y H I H D+KP ++L ++ P +K+ FG+A ++ G +
Sbjct: 116 ATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF- 174
Query: 170 SGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVG 227
+ GTP ++APE++ + G D+W PF+G
Sbjct: 175 -------------KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 1 MLSVDPNKRITIHEVINHKWLKMK 24
+L DP KR+TI + + H W+K K
Sbjct: 255 LLVKDPKKRMTIQDSLQHPWIKPK 278
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 86/178 (48%), Gaps = 19/178 (10%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
D++RE +I ++HP+V+ L E Y ++ + ++ E + G ++ + + + +E
Sbjct: 59 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES----LTEEE 114
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAP-VKLGGFGVAIQLQDGQLYC 169
A+ +++Q+L + Y H I H D+KP ++L ++ P +K+ FG+A ++ G +
Sbjct: 115 ATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF- 173
Query: 170 SGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVG 227
+ GTP ++APE++ + G D+W PF+G
Sbjct: 174 -------------KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 218
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 1 MLSVDPNKRITIHEVINHKWLKMK 24
+L DP KR+TI + + H W+K K
Sbjct: 254 LLVKDPKKRMTIQDSLQHPWIKPK 277
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 86/178 (48%), Gaps = 19/178 (10%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
D++RE +I ++HP+V+ L E Y ++ + ++ E + G ++ + + + +E
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES----LTEEE 115
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAP-VKLGGFGVAIQLQDGQLYC 169
A+ +++Q+L + Y H I H D+KP ++L ++ P +K+ FG+A ++ G +
Sbjct: 116 ATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF- 174
Query: 170 SGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVG 227
+ GTP ++APE++ + G D+W PF+G
Sbjct: 175 -------------KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 1 MLSVDPNKRITIHEVINHKWLKMK 24
+L DP KR+TI + + H W+K K
Sbjct: 255 LLVKDPKKRMTIQDSLQHPWIKPK 278
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 86/178 (48%), Gaps = 19/178 (10%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
D++RE +I ++HP+V+ L E Y ++ + ++ E + G ++ + + + +E
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES----LTEEE 115
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAP-VKLGGFGVAIQLQDGQLYC 169
A+ +++Q+L + Y H I H D+KP ++L ++ P +K+ FG+A ++ G +
Sbjct: 116 ATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF- 174
Query: 170 SGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVG 227
+ GTP ++APE++ + G D+W PF+G
Sbjct: 175 -------------KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 1 MLSVDPNKRITIHEVINHKWLKMK 24
+L DP KR+TI + + H W+K K
Sbjct: 255 LLVKDPKKRMTIQDSLQHPWIKPK 278
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 88/181 (48%), Gaps = 19/181 (10%)
Query: 48 TEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYS 107
+ D++RE +I ++HP+V+ L E Y ++ + ++ E + G ++ F+ + + +
Sbjct: 57 SREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL-FDFLAEKES---LT 112
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAP-VKLGGFGVAIQLQDGQ 166
E A+ +++Q+L + Y H I H D+KP ++L ++ P +K+ FG+A ++ G
Sbjct: 113 EEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN 172
Query: 167 LYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFV 226
+ + GTP ++APE++ + G D+W PF+
Sbjct: 173 EF--------------KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
Query: 227 G 227
G
Sbjct: 219 G 219
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 1 MLSVDPNKRITIHEVINHKWLKMK 24
+L DP KR+TI + + H W+K K
Sbjct: 255 LLVKDPKKRMTIQDSLQHPWIKPK 278
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 74/149 (49%), Gaps = 21/149 (14%)
Query: 65 PHVVELLETYSS----EGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLE 120
PH+V +L+ Y + + L ++ E M+G ++ I R F +E A+ MR +
Sbjct: 82 PHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAF--TEREAAEIMRDIGT 139
Query: 121 ALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTT 180
A+++ H ++I HRD+KP +L +KE A +KL FG A + L
Sbjct: 140 AIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTP---------- 189
Query: 181 KAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
TP+Y+APEV+ +KY K D+W
Sbjct: 190 -----CYTPYYVAPEVLGPEKYDKSCDMW 213
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 1 MLSVDPNKRITIHEVINHKWLKMKL 25
+L DP +R+TI + +NH W+ +
Sbjct: 271 LLKTDPTERLTITQFMNHPWINQSM 295
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 83/190 (43%), Gaps = 24/190 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E I + P +V+L ++ LYMV EY G ++ F +RR +SE A Y
Sbjct: 92 EKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEM-FSHLRRIGR---FSEPHARFY 147
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
Q++ Y H D+I+RD+KP +L+ + +K+ FG A +++
Sbjct: 148 AAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIKVADFGFAKRVK----------- 193
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSRD-RLF 233
+ GTP Y+APE+I + Y K VD W PF + +++
Sbjct: 194 -----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 234 QSITKGKLHI 243
+ I GK+
Sbjct: 249 EKIVSGKVRF 258
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 88/181 (48%), Gaps = 19/181 (10%)
Query: 48 TEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYS 107
+ D++RE +I ++HP+V+ L E Y ++ + ++ E + G ++ F+ + + +
Sbjct: 57 SREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGEL-FDFLAEKES---LT 112
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAP-VKLGGFGVAIQLQDGQ 166
E A+ +++Q+L + Y H I H D+KP ++L ++ P +K+ FG+A ++ G
Sbjct: 113 EEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN 172
Query: 167 LYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFV 226
+ + GTP ++APE++ + G D+W PF+
Sbjct: 173 EF--------------KNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 218
Query: 227 G 227
G
Sbjct: 219 G 219
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 1 MLSVDPNKRITIHEVINHKWLKMK 24
+L DP KR+TI + + H W+K K
Sbjct: 255 LLVKDPKKRMTIQDSLQHPWIKPK 278
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 85/190 (44%), Gaps = 21/190 (11%)
Query: 53 KREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVAS 112
K E I + HP +V+L + +EG LY++ +++ G D + R + +++E
Sbjct: 74 KMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGD----LFTRLSKEVMFTEEDVK 129
Query: 113 HYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGG 172
Y+ ++ AL + H II+RD+KP +LL + +KL FG++
Sbjct: 130 FYLAELALALDHLHSLGIIYRDLKPENILL---DEEGHIKLTDFGLS------------K 174
Query: 173 ERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGS-RDR 231
E +DH KA GT YMAPEV+ + + + D W PF G R
Sbjct: 175 ESIDH-EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKE 233
Query: 232 LFQSITKGKL 241
I K KL
Sbjct: 234 TMTMILKAKL 243
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 73/160 (45%), Gaps = 26/160 (16%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E I P VV+L + + LYMV EYM G D+ + + E A Y
Sbjct: 119 ERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLV-----NLMSNYDVPEKWARFY 173
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL-QDGQLYCSGGE 173
+V+ AL H IHRD+KP +LL + S +KL FG +++ ++G + C
Sbjct: 174 TAEVVLALDAIHSMGFIHRDVKPDNMLL---DKSGHLKLADFGTCMKMNKEGMVRCDTA- 229
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQK----YGKPVDIW 209
+GTP Y++PEV++ Q YG+ D W
Sbjct: 230 ------------VGTPDYISPEVLKSQGGDGYYGRECDWW 257
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 85/171 (49%), Gaps = 20/171 (11%)
Query: 41 ERLNHYTTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRA 100
ER + Y+ L E + LKH ++V+ L ++S G + + E + G + ++R
Sbjct: 57 ERDSRYSQP--LHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLS-ALLRSK 113
Query: 101 TAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAI 160
+E Y +Q+LE L+Y H+N I+HRDIK VL+ S +K+ FG +
Sbjct: 114 WGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINT--YSGVLKISDFGTSK 171
Query: 161 QLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIED--QKYGKPVDIW 209
+L G C+ + +T GT YMAPE+I+ + YGK DIW
Sbjct: 172 RLA-GINPCT-----ETFT-------GTLQYMAPEIIDKGPRGYGKAADIW 209
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 89/185 (48%), Gaps = 18/185 (9%)
Query: 47 TTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVY 106
T + +K+E +I ++ +H +++ L E++ S L M+FE++ G DI FE R T+ F
Sbjct: 43 TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDI-FE--RINTSAFEL 99
Query: 107 SEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQ 166
+E Y+ QV EAL++ H ++I H DI+P ++ + S+ +K+ FG A QL+ G
Sbjct: 100 NEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTR-RSSTIKIIEFGQARQLKPGD 158
Query: 167 LYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFV 226
+ RL P Y APEV + D+W PF+
Sbjct: 159 NF-----RL---------LFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFL 204
Query: 227 GSRDR 231
++
Sbjct: 205 AETNQ 209
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 85/190 (44%), Gaps = 21/190 (11%)
Query: 53 KREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVAS 112
K E I + HP +V+L + +EG LY++ +++ G D + R + +++E
Sbjct: 75 KMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGD----LFTRLSKEVMFTEEDVK 130
Query: 113 HYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGG 172
Y+ ++ AL + H II+RD+KP +LL + +KL FG++
Sbjct: 131 FYLAELALALDHLHSLGIIYRDLKPENILL---DEEGHIKLTDFGLS------------K 175
Query: 173 ERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGS-RDR 231
E +DH KA GT YMAPEV+ + + + D W PF G R
Sbjct: 176 ESIDH-EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKE 234
Query: 232 LFQSITKGKL 241
I K KL
Sbjct: 235 TMTMILKAKL 244
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 93/207 (44%), Gaps = 35/207 (16%)
Query: 57 TICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMR 116
T+ + +++EL+E + + Y+VFE + G I I ++ ++E AS +R
Sbjct: 63 TLYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKH----FNEREASRVVR 118
Query: 117 QVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGF--GVAIQLQDGQLYCSGGER 174
V AL + H I HRD+KP +L + E +PVK+ F G ++L + C+
Sbjct: 119 DVAAALDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNS---CT---- 171
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIE---DQK--YGKPVDIWXXXXXXXXXXXXXXPFVG-- 227
T + G+ YMAPEV+E DQ Y K D+W PFVG
Sbjct: 172 -PITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHC 230
Query: 228 --------------SRDRLFQSITKGK 240
+++LF+SI +GK
Sbjct: 231 GADCGWDRGEVCRVCQNKLFESIQEGK 257
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 73/160 (45%), Gaps = 26/160 (16%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E I P VV+L + + LYMV EYM G D+ + + E A Y
Sbjct: 124 ERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLV-----NLMSNYDVPEKWARFY 178
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL-QDGQLYCSGGE 173
+V+ AL H IHRD+KP +LL + S +KL FG +++ ++G + C
Sbjct: 179 TAEVVLALDAIHSMGFIHRDVKPDNMLL---DKSGHLKLADFGTCMKMNKEGMVRCDTA- 234
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQK----YGKPVDIW 209
+GTP Y++PEV++ Q YG+ D W
Sbjct: 235 ------------VGTPDYISPEVLKSQGGDGYYGRECDWW 262
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 86/190 (45%), Gaps = 24/190 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E I + P +V+L ++ LYMV EY+ G ++ F +RR +SE A Y
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM-FSHLRRIGR---FSEPHARFY 146
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
Q++ Y H D+I+RD+KP +L+ + +++ FG A +++ G+ +
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWXLA--- 199
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSRD-RLF 233
GTP Y+APE+I + Y K VD W PF + +++
Sbjct: 200 ------------GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 234 QSITKGKLHI 243
+ I GK+
Sbjct: 248 EKIVSGKVRF 257
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 73/160 (45%), Gaps = 26/160 (16%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E I P VV+L + + LYMV EYM G D+ + + E A Y
Sbjct: 124 ERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLV-----NLMSNYDVPEKWARFY 178
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL-QDGQLYCSGGE 173
+V+ AL H IHRD+KP +LL + S +KL FG +++ ++G + C
Sbjct: 179 TAEVVLALDAIHSMGFIHRDVKPDNMLL---DKSGHLKLADFGTCMKMNKEGMVRCDTA- 234
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQK----YGKPVDIW 209
+GTP Y++PEV++ Q YG+ D W
Sbjct: 235 ------------VGTPDYISPEVLKSQGGDGYYGRECDWW 262
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 85/171 (49%), Gaps = 20/171 (11%)
Query: 41 ERLNHYTTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRA 100
ER + Y+ L E + LKH ++V+ L ++S G + + E + G + ++R
Sbjct: 43 ERDSRYSQP--LHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLS-ALLRSK 99
Query: 101 TAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAI 160
+E Y +Q+LE L+Y H+N I+HRDIK VL+ S +K+ FG +
Sbjct: 100 WGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTY--SGVLKISDFGTSK 157
Query: 161 QLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIED--QKYGKPVDIW 209
+L G C+ + +T GT YMAPE+I+ + YGK DIW
Sbjct: 158 RLA-GINPCT-----ETFT-------GTLQYMAPEIIDKGPRGYGKAADIW 195
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 85/190 (44%), Gaps = 21/190 (11%)
Query: 53 KREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVAS 112
K E I + HP +V+L + +EG LY++ +++ G D + R + +++E
Sbjct: 74 KMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGD----LFTRLSKEVMFTEEDVK 129
Query: 113 HYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGG 172
Y+ ++ AL + H II+RD+KP +LL + +KL FG++
Sbjct: 130 FYLAELALALDHLHSLGIIYRDLKPENILL---DEEGHIKLTDFGLS------------K 174
Query: 173 ERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGS-RDR 231
E +DH KA GT YMAPEV+ + + + D W PF G R
Sbjct: 175 ESIDH-EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKE 233
Query: 232 LFQSITKGKL 241
I K KL
Sbjct: 234 TMTMILKAKL 243
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 82/175 (46%), Gaps = 21/175 (12%)
Query: 63 KHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEAL 122
HP + +L + + L+ V E+++G D+ F I + + EA A Y +++ AL
Sbjct: 82 NHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRR----FDEARARFYAAEIISAL 137
Query: 123 RYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKA 182
+ H+ II+RD+K VLL ++ KL FG+ ++G C+G
Sbjct: 138 MFLHDKGIIYRDLKLDNVLL---DHEGHCKLADFGMC---KEG--ICNG--------VTT 181
Query: 183 GHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVG-SRDRLFQSI 236
GTP Y+APE++++ YG VD W PF + D LF++I
Sbjct: 182 ATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAI 236
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 73.9 bits (180), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 84/190 (44%), Gaps = 24/190 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E I + P +V+L ++ LYMV EY+ G ++ F +RR +SE A Y
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM-FSHLRRIGR---FSEPHARFY 146
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
Q++ Y H D+I+RD+KP +L+ + +++ FG A +++
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK----------- 192
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSRD-RLF 233
+ GTP Y+APE+I + Y K VD W PF + +++
Sbjct: 193 -----GRTWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 234 QSITKGKLHI 243
+ I GK+
Sbjct: 248 EKIVSGKVRF 257
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 84/190 (44%), Gaps = 24/190 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E I + P +V+L ++ LYMV EY+ G ++ F +RR +SE A Y
Sbjct: 91 EKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEM-FSHLRRIGR---FSEPHARFY 146
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
Q++ Y H D+I+RD+KP +L+ + +++ FG A +++
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK----------- 192
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSRD-RLF 233
+ GTP Y+APE+I + Y K VD W PF + +++
Sbjct: 193 -----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 234 QSITKGKLHI 243
+ I GK+
Sbjct: 248 EKIVSGKVRF 257
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 84/190 (44%), Gaps = 24/190 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E I + P +V+L ++ LYMV EY+ G ++ F +RR +SE A Y
Sbjct: 91 EKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEM-FSHLRRIGR---FSEPHARFY 146
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
Q++ Y H D+I+RD+KP +L+ + +++ FG A +++
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK----------- 192
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSRD-RLF 233
+ GTP Y+APE+I + Y K VD W PF + +++
Sbjct: 193 -----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 234 QSITKGKLHI 243
+ I GK+
Sbjct: 248 EKIVSGKVRF 257
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 84/190 (44%), Gaps = 24/190 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E I + P +V+L ++ LYMV EY G ++ F +RR +SE A Y
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM-FSHLRRIGR---FSEPHARFY 146
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
Q++ Y H D+I+RD+KP +++ + +K+ FG+A +++
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLMI---DQQGYIKVTDFGLAKRVK----------- 192
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSRD-RLF 233
+ GTP Y+APE+I + Y K VD W PF + +++
Sbjct: 193 -----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 234 QSITKGKLHI 243
+ I GK+
Sbjct: 248 EKIVSGKVRF 257
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 84/190 (44%), Gaps = 24/190 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E I + P +V+L ++ LYMV EY+ G ++ F +RR +SE A Y
Sbjct: 91 EKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEM-FSHLRRIGR---FSEPHARFY 146
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
Q++ Y H D+I+RD+KP +L+ + +++ FG A +++
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK----------- 192
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSRD-RLF 233
+ GTP Y+APE+I + Y K VD W PF + +++
Sbjct: 193 -----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 234 QSITKGKLHI 243
+ I GK+
Sbjct: 248 EKIVSGKVRF 257
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 84/190 (44%), Gaps = 24/190 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E I + P +V+L ++ LYMV EY+ G ++ F +RR +SE A Y
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM-FSHLRRIGR---FSEPHARFY 147
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
Q++ Y H D+I+RD+KP +L+ + +++ FG A +++
Sbjct: 148 AAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK----------- 193
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSRD-RLF 233
+ GTP Y+APE+I + Y K VD W PF + +++
Sbjct: 194 -----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 234 QSITKGKLHI 243
+ I GK+
Sbjct: 249 EKIVSGKVRF 258
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 84/190 (44%), Gaps = 24/190 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E I + P +V+L ++ LYMV EY+ G ++ F +RR +SE A Y
Sbjct: 84 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM-FSHLRRIGR---FSEPHARFY 139
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
Q++ Y H D+I+RD+KP +L+ + +++ FG A +++
Sbjct: 140 AAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK----------- 185
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSRD-RLF 233
+ GTP Y+APE+I + Y K VD W PF + +++
Sbjct: 186 -----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 240
Query: 234 QSITKGKLHI 243
+ I GK+
Sbjct: 241 EKIVSGKVRF 250
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 83/190 (43%), Gaps = 21/190 (11%)
Query: 53 KREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVAS 112
K E I + HP VV+L + +EG LY++ +++ G D + R + +++E
Sbjct: 78 KMERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGD----LFTRLSKEVMFTEEDVK 133
Query: 113 HYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGG 172
Y+ ++ L + H II+RD+KP +LL + +KL FG++
Sbjct: 134 FYLAELALGLDHLHSLGIIYRDLKPENILL---DEEGHIKLTDFGLS------------K 178
Query: 173 ERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVG-SRDR 231
E +DH KA GT YMAPEV+ Q + D W PF G R
Sbjct: 179 EAIDH-EKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKE 237
Query: 232 LFQSITKGKL 241
I K KL
Sbjct: 238 TMTLILKAKL 247
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 84/190 (44%), Gaps = 24/190 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E I + P +V+L ++ LYMV EY+ G ++ F +RR +SE A Y
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM-FSHLRRIGR---FSEPHARFY 146
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
Q++ Y H D+I+RD+KP +L+ + +++ FG A +++
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK----------- 192
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSRD-RLF 233
+ GTP Y+APE+I + Y K VD W PF + +++
Sbjct: 193 -----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQIY 247
Query: 234 QSITKGKLHI 243
+ I GK+
Sbjct: 248 EKIVSGKVRF 257
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 86/178 (48%), Gaps = 19/178 (10%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
D++RE +I ++HP+V+ L E Y ++ + ++ E + G ++ + + + +E
Sbjct: 60 DIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKES----LTEEE 115
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAP-VKLGGFGVAIQLQDGQLYC 169
A+ +++Q+L + Y H I H D+KP ++L ++ P +K+ FG+A ++ G +
Sbjct: 116 ATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF- 174
Query: 170 SGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVG 227
+ GTP ++APE++ + G D+W PF+G
Sbjct: 175 -------------KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 219
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 16/24 (66%)
Query: 1 MLSVDPNKRITIHEVINHKWLKMK 24
+L DP KR+TI + + H W+K K
Sbjct: 255 LLVKDPKKRMTIQDSLQHPWIKPK 278
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 84/190 (44%), Gaps = 24/190 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E I + P +V+L ++ LYMV EY+ G ++ F +RR +SE A Y
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM-FSHLRRIGR---FSEPHARFY 146
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
Q++ Y H D+I+RD+KP +L+ + +++ FG A +++
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK----------- 192
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSRD-RLF 233
+ GTP Y+APE+I + Y K VD W PF + +++
Sbjct: 193 -----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 234 QSITKGKLHI 243
+ I GK+
Sbjct: 248 EKIVSGKVRF 257
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 84/190 (44%), Gaps = 24/190 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E I + P +V+L ++ LYMV EY+ G ++ F +RR +SE A Y
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM-FSHLRRIGR---FSEPHARFY 146
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
Q++ Y H D+I+RD+KP +L+ + +++ FG A +++
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK----------- 192
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSRD-RLF 233
+ GTP Y+APE+I + Y K VD W PF + +++
Sbjct: 193 -----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 234 QSITKGKLHI 243
+ I GK+
Sbjct: 248 EKIVSGKVRF 257
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 84/190 (44%), Gaps = 24/190 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E I + P +V+L ++ LYMV EY+ G ++ F +RR +SE A Y
Sbjct: 112 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM-FSHLRRIGR---FSEPHARFY 167
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
Q++ Y H D+I+RD+KP +L+ + +++ FG A +++
Sbjct: 168 AAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG---------- 214
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSRD-RLF 233
+ GTP Y+APE+I + Y K VD W PF + +++
Sbjct: 215 ------RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 268
Query: 234 QSITKGKLHI 243
+ I GK+
Sbjct: 269 EKIVSGKVRF 278
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 86/190 (45%), Gaps = 24/190 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E I + P +V+L ++ LYMV EY+ G ++ F +RR +SE A Y
Sbjct: 77 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM-FSHLRRIGR---FSEPHARFY 132
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
Q++ Y H D+I+RD+KP +L+ + +++ FG A +++ G+ +
Sbjct: 133 AAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWT----- 183
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSRD-RLF 233
GTP Y+APE+I + Y K VD W PF + +++
Sbjct: 184 ----------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 233
Query: 234 QSITKGKLHI 243
+ I GK+
Sbjct: 234 EKIVSGKVRF 243
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 86/190 (45%), Gaps = 24/190 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E I + P +V+L ++ LYMV EY+ G ++ F +RR +SE A Y
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM-FSHLRRIGR---FSEPHARFY 147
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
Q++ Y H D+I+RD+KP +L+ + +++ FG A +++ G+ +
Sbjct: 148 AAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWT----- 198
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSRD-RLF 233
GTP Y+APE+I + Y K VD W PF + +++
Sbjct: 199 ----------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 234 QSITKGKLHI 243
+ I GK+
Sbjct: 249 EKIVSGKVRF 258
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 83/190 (43%), Gaps = 24/190 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E I + P +V+L ++ LYMV EY+ G ++ F +RR +SE A Y
Sbjct: 112 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM-FSHLRRIGR---FSEPHARFY 167
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
Q++ Y H D+I+RD+KP +L+ + +++ FG A +++
Sbjct: 168 AAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGATWTLC---- 220
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSRD-RLF 233
GTP Y+APE+I + Y K VD W PF + +++
Sbjct: 221 ------------GTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 268
Query: 234 QSITKGKLHI 243
+ I GK+
Sbjct: 269 EKIVSGKVRF 278
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 84/190 (44%), Gaps = 24/190 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E I + P +V+L ++ LYMV EY+ G ++ F +RR +SE A Y
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM-FSHLRRIGR---FSEPHARFY 146
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
Q++ Y H D+I+RD+KP +L+ + +++ FG A +++
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK----------- 192
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSRD-RLF 233
+ GTP Y+APE+I + Y K VD W PF + +++
Sbjct: 193 -----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 234 QSITKGKLHI 243
+ I GK+
Sbjct: 248 EKIVSGKVRF 257
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 84/190 (44%), Gaps = 24/190 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E I + P +V+L ++ LYMV EY+ G ++ F +RR +SE A Y
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM-FSHLRRIGR---FSEPHARFY 146
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
Q++ Y H D+I+RD+KP +L+ + +++ FG A +++
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK----------- 192
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSRD-RLF 233
+ GTP Y+APE+I + Y K VD W PF + +++
Sbjct: 193 -----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 234 QSITKGKLHI 243
+ I GK+
Sbjct: 248 EKIVSGKVRF 257
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 84/190 (44%), Gaps = 24/190 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E I + P +V+L ++ LYMV EY+ G ++ F +RR +SE A Y
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM-FSHLRRIGR---FSEPHARFY 147
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
Q++ Y H D+I+RD+KP +L+ + +++ FG A +++
Sbjct: 148 AAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK----------- 193
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSRD-RLF 233
+ GTP Y+APE+I + Y K VD W PF + +++
Sbjct: 194 -----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 234 QSITKGKLHI 243
+ I GK+
Sbjct: 249 EKIVSGKVRF 258
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 84/190 (44%), Gaps = 24/190 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E I + P +V+L ++ LYMV EY+ G ++ F +RR +SE A Y
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM-FSHLRRIGR---FSEPHARFY 147
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
Q++ Y H D+I+RD+KP +L+ + +++ FG A +++
Sbjct: 148 AAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK----------- 193
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSRD-RLF 233
+ GTP Y+APE+I + Y K VD W PF + +++
Sbjct: 194 -----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 234 QSITKGKLHI 243
+ I GK+
Sbjct: 249 EKIVSGKVRF 258
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 84/190 (44%), Gaps = 24/190 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E I + P +V+L ++ LYMV EY+ G ++ F +RR +SE A Y
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM-FSHLRRIGR---FSEPHARFY 147
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
Q++ Y H D+I+RD+KP +L+ + +++ FG A +++
Sbjct: 148 AAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK----------- 193
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSRD-RLF 233
+ GTP Y+APE+I + Y K VD W PF + +++
Sbjct: 194 -----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 234 QSITKGKLHI 243
+ I GK+
Sbjct: 249 EKIVSGKVRF 258
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 84/190 (44%), Gaps = 24/190 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E I + P +V+L ++ LYMV EY+ G ++ F +RR +SE A Y
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM-FSHLRRIGR---FSEPHARFY 146
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
Q++ Y H D+I+RD+KP +L+ + +++ FG A +++
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK----------- 192
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSRD-RLF 233
+ GTP Y+APE+I + Y K VD W PF + +++
Sbjct: 193 -----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 234 QSITKGKLHI 243
+ I GK+
Sbjct: 248 EKIVSGKVRF 257
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 84/190 (44%), Gaps = 24/190 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E I + P +V+L ++ LYMV EY+ G ++ F +RR +SE A Y
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM-FSHLRRIGR---FSEPHARFY 147
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
Q++ Y H D+I+RD+KP +L+ + +++ FG A +++
Sbjct: 148 AAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK----------- 193
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSRD-RLF 233
+ GTP Y+APE+I + Y K VD W PF + +++
Sbjct: 194 -----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 234 QSITKGKLHI 243
+ I GK+
Sbjct: 249 EKIVSGKVRF 258
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 84/190 (44%), Gaps = 24/190 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E I + P +V+L ++ LYMV EY+ G ++ F +RR +SE A Y
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM-FSHLRRIGR---FSEPHARFY 146
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
Q++ Y H D+I+RD+KP +L+ + +++ FG A +++
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK----------- 192
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSRD-RLF 233
+ GTP Y+APE+I + Y K VD W PF + +++
Sbjct: 193 -----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 234 QSITKGKLHI 243
+ I GK+
Sbjct: 248 EKIVSGKVRF 257
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 90/220 (40%), Gaps = 54/220 (24%)
Query: 52 LKREATICHMLKHPHVVELLETYSSEGMLYMVFE-------------YMDGS------DI 92
+K E + L HP++ L E Y E + +V E ++D S D+
Sbjct: 75 IKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDV 134
Query: 93 -------CFEIVRRATAG----------FVYSEAVASHYMRQVLEALRYCHENDIIHRDI 135
C E A G FV E + S+ MRQ+ AL Y H I HRDI
Sbjct: 135 VKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDI 194
Query: 136 KPHCVLLANKENSAPVKLGGFGVA---IQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYM 192
KP L + + S +KL FG++ +L +G+ Y TTKA GTP+++
Sbjct: 195 KPENFLFSTNK-SFEIKLVDFGLSKEFYKLNNGEYY--------GMTTKA----GTPYFV 241
Query: 193 APEVIE--DQKYGKPVDIWXXXXXXXXXXXXXXPFVGSRD 230
APEV+ ++ YG D W PF G D
Sbjct: 242 APEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVND 281
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 84/190 (44%), Gaps = 24/190 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E I + P +V+L ++ LYMV EY+ G ++ F +RR +SE A Y
Sbjct: 78 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM-FSHLRRIGR---FSEPHARFY 133
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
Q++ Y H D+I+RD+KP +L+ + +++ FG A +++
Sbjct: 134 AAQIVLTFEYLHSLDLIYRDLKPENLLI---DEQGYIQVTDFGFAKRVK----------- 179
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSRD-RLF 233
+ GTP Y+APE+I + Y K VD W PF + +++
Sbjct: 180 -----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 234
Query: 234 QSITKGKLHI 243
+ I GK+
Sbjct: 235 EKIVSGKVRF 244
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 84/190 (44%), Gaps = 24/190 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E I + P +V+L ++ LYMV EY+ G ++ F +RR +SE A Y
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM-FSHLRRIGR---FSEPHARFY 146
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
Q++ Y H D+I+RD+KP +L+ + +++ FG A +++
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK----------- 192
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSRD-RLF 233
+ GTP Y+APE+I + Y K VD W PF + +++
Sbjct: 193 -----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 234 QSITKGKLHI 243
+ I GK+
Sbjct: 248 EKIVSGKVRF 257
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 84/190 (44%), Gaps = 24/190 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E I + P +V+L ++ LYMV EY+ G ++ F +RR +SE A Y
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM-FSHLRRIGR---FSEPHARFY 146
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
Q++ Y H D+I+RD+KP +L+ + +++ FG A +++
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK----------- 192
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSRD-RLF 233
+ GTP Y+APE+I + Y K VD W PF + +++
Sbjct: 193 -----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 234 QSITKGKLHI 243
+ I GK+
Sbjct: 248 EKIVSGKVRF 257
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 81/157 (51%), Gaps = 20/157 (12%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE ++ L HP++V+LL+ +E LY+VFE++ D+ + A G +
Sbjct: 51 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGI--PLPLIKS 107
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y+ Q+L+ L +CH + ++HRD+KP LL N E + +KL FG+A + G
Sbjct: 108 YLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGA--IKLADFGLA---------RAFGV 155
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
+ YT H + T Y APE++ K Y VDIW
Sbjct: 156 PVRTYT----HEVVTLWYRAPEILLGXKYYSTAVDIW 188
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 83/190 (43%), Gaps = 24/190 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E I + P +V+L ++ LYMV EY G ++ F +RR +SE A Y
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM-FSHLRRIGR---FSEPHARFY 146
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
Q++ Y H D+I+RD+KP +++ + +K+ FG A +++
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLMI---DQQGYIKVTDFGFAKRVKG---------- 193
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSRD-RLF 233
+ GTP Y+APE+I + Y K VD W PF + +++
Sbjct: 194 ------RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 234 QSITKGKLHI 243
+ I GK+
Sbjct: 248 EKIVSGKVRF 257
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 83/190 (43%), Gaps = 24/190 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E I + P +V+L ++ LYMV EY G ++ F +RR +SE A Y
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM-FSHLRRIGR---FSEPHARFY 147
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
Q++ Y H D+I+RD+KP +++ + +K+ FG A +++
Sbjct: 148 AAQIVLTFEYLHSLDLIYRDLKPENLMI---DQQGYIKVTDFGFAKRVKG---------- 194
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSRD-RLF 233
+ GTP Y+APE+I + Y K VD W PF + +++
Sbjct: 195 ------RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 234 QSITKGKLHI 243
+ I GK+
Sbjct: 249 EKIVSGKVRF 258
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 86/192 (44%), Gaps = 21/192 (10%)
Query: 48 TEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYS 107
E + + + + K P + +L + + LY V EY++G D+ + I + +
Sbjct: 63 VECTMVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGK----FK 118
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQL 167
E A Y ++ L + H+ II+RD+K V+L ++ +K+ FG+ +
Sbjct: 119 EPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNVML---DSEGHIKIADFGMCKE------ 169
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVG 227
+D TT+ GTP Y+APE+I Q YGK VD W PF G
Sbjct: 170 -----HMMDGVTTR--EFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDG 222
Query: 228 -SRDRLFQSITK 238
D LFQSI +
Sbjct: 223 EDEDELFQSIME 234
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 81/157 (51%), Gaps = 20/157 (12%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE ++ L HP++V+LL+ +E LY+VFE++ D+ + A G +
Sbjct: 58 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGI--PLPLIKS 114
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y+ Q+L+ L +CH + ++HRD+KP LL N E + +KL FG+A + G
Sbjct: 115 YLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGA--IKLADFGLA---------RAFGV 162
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
+ YT H + T Y APE++ K Y VDIW
Sbjct: 163 PVRTYT----HEVVTLWYRAPEILLGXKYYSTAVDIW 195
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 83/190 (43%), Gaps = 24/190 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E I + P +V+L ++ LYMV EY+ G ++ F +RR +SE A Y
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM-FSHLRRIGR---FSEPHARFY 146
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
Q++ Y H D+I+RD+KP +L+ + +++ FG A +++
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK----------- 192
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSRD-RLF 233
+ GTP Y+APE+I + Y K VD W PF +++
Sbjct: 193 -----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIY 247
Query: 234 QSITKGKLHI 243
+ I GK+
Sbjct: 248 EKIVSGKVRF 257
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 76/148 (51%), Gaps = 20/148 (13%)
Query: 62 LKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEA 121
+KHP +V L ++ + LY V +Y++G ++ + + R + E A Y ++ A
Sbjct: 96 VKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRER----CFLEPRARFYAAEIASA 151
Query: 122 LRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTK 181
L Y H +I++RD+KP +LL ++ + L FG+ C E ++H +T
Sbjct: 152 LGYLHSLNIVYRDLKPENILL---DSQGHIVLTDFGL----------CK--ENIEHNSTT 196
Query: 182 AGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+ GTP Y+APEV+ Q Y + VD W
Sbjct: 197 STF-CGTPEYLAPEVLHKQPYDRTVDWW 223
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 79/160 (49%), Gaps = 29/160 (18%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E + +HP + L ++ + L V EY +G ++ F + R V+SE A Y
Sbjct: 198 ENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRER----VFSEDRARFY 253
Query: 115 MRQVLEALRYCH-ENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQ-LQDG---QLYC 169
+++ AL Y H E ++++RD+K ++L + +K+ FG+ + ++DG + +C
Sbjct: 254 GAEIVSALDYLHSEKNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKTFC 310
Query: 170 SGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
GTP Y+APEV+ED YG+ VD W
Sbjct: 311 -----------------GTPEYLAPEVLEDNDYGRAVDWW 333
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 87/188 (46%), Gaps = 30/188 (15%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E + +HP + L ++ + L V EY +G ++ F + R V+SE A Y
Sbjct: 201 ENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRER----VFSEDRARFY 256
Query: 115 MRQVLEALRYCH-ENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQ-LQDG---QLYC 169
+++ AL Y H E ++++RD+K ++L + +K+ FG+ + ++DG + +C
Sbjct: 257 GAEIVSALDYLHSEKNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKTFC 313
Query: 170 SGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSR 229
GTP Y+APEV+ED YG+ VD W PF
Sbjct: 314 -----------------GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD 356
Query: 230 -DRLFQSI 236
++LF+ I
Sbjct: 357 HEKLFELI 364
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 84/190 (44%), Gaps = 24/190 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E I + P +V+L ++ LYMV EY+ G ++ F +RR ++E A Y
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM-FSHLRRIGR---FAEPHARFY 146
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
Q++ Y H D+I+RD+KP +L+ + +++ FG A +++
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK----------- 192
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSRD-RLF 233
+ GTP Y+APE+I + Y K VD W PF + +++
Sbjct: 193 -----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 234 QSITKGKLHI 243
+ I GK+
Sbjct: 248 EKIVSGKVRF 257
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 84/190 (44%), Gaps = 24/190 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E I + P +V+L ++ LYMV EY G ++ F +RR +SE A Y
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM-FSHLRRIGR---FSEPHARFY 146
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
Q++ Y H D+I+RD+KP +++ + +++ FG+A +++
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLMI---DQQGYIQVTDFGLAKRVK----------- 192
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSRD-RLF 233
+ GTP Y+APE+I + Y K VD W PF + +++
Sbjct: 193 -----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 234 QSITKGKLHI 243
+ I GK+
Sbjct: 248 EKIVSGKVRF 257
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 80/157 (50%), Gaps = 20/157 (12%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE ++ L HP++V+LL+ +E LY+VFE++ D+ + A G +
Sbjct: 51 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGI--PLPLIKS 107
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y+ Q+L+ L +CH + ++HRD+KP LL N E + +KL FG+A G
Sbjct: 108 YLFQLLQGLSFCHSHRVLHRDLKPQN-LLINTEGA--IKLADFGLARAF---------GV 155
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
+ YT H + T Y APE++ K Y VDIW
Sbjct: 156 PVRTYT----HEVVTLWYRAPEILLGCKYYSTAVDIW 188
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 84/190 (44%), Gaps = 24/190 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E I + P +V+L ++ LYMV EY+ G ++ F +RR +SE A Y
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM-FSHLRRIGR---FSEPHARFY 146
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
Q++ Y H D+I+RD+KP +++ + +++ FG A +++
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLII---DQQGYIQVTDFGFAKRVK----------- 192
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSRD-RLF 233
+ GTP Y+APE+I + Y K VD W PF + +++
Sbjct: 193 -----GRTWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 234 QSITKGKLHI 243
+ I GK+
Sbjct: 248 EKIVSGKVRF 257
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 80/157 (50%), Gaps = 20/157 (12%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE ++ L HP++V+LL+ +E LY+VFE++ D+ + A G +
Sbjct: 51 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGI--PLPLIKS 107
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y+ Q+L+ L +CH + ++HRD+KP LL N E + +KL FG+A G
Sbjct: 108 YLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGA--IKLADFGLARAF---------GV 155
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
+ YT H + T Y APE++ K Y VDIW
Sbjct: 156 PVRTYT----HEVVTLWYRAPEILLGCKYYSTAVDIW 188
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 80/157 (50%), Gaps = 20/157 (12%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE ++ L HP++V+LL+ +E LY+VFE++ D+ + A G +
Sbjct: 50 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGI--PLPLIKS 106
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y+ Q+L+ L +CH + ++HRD+KP LL N E + +KL FG+A G
Sbjct: 107 YLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGA--IKLADFGLARAF---------GV 154
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
+ YT H + T Y APE++ K Y VDIW
Sbjct: 155 PVRTYT----HEVVTLWYRAPEILLGCKYYSTAVDIW 187
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 87/188 (46%), Gaps = 30/188 (15%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E + +HP + L ++ + L V EY +G ++ F + R V+SE A Y
Sbjct: 59 ENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRER----VFSEDRARFY 114
Query: 115 MRQVLEALRYCH-ENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQ-LQDG---QLYC 169
+++ AL Y H E ++++RD+K ++L + +K+ FG+ + ++DG + +C
Sbjct: 115 GAEIVSALDYLHSEKNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKXFC 171
Query: 170 SGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGS- 228
GTP Y+APEV+ED YG+ VD W PF
Sbjct: 172 -----------------GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD 214
Query: 229 RDRLFQSI 236
++LF+ I
Sbjct: 215 HEKLFELI 222
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 87/188 (46%), Gaps = 30/188 (15%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E + +HP + L ++ + L V EY +G ++ F + R V+SE A Y
Sbjct: 58 ENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRER----VFSEDRARFY 113
Query: 115 MRQVLEALRYCH-ENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQ-LQDG---QLYC 169
+++ AL Y H E ++++RD+K ++L + +K+ FG+ + ++DG + +C
Sbjct: 114 GAEIVSALDYLHSEKNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKXFC 170
Query: 170 SGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGS- 228
GTP Y+APEV+ED YG+ VD W PF
Sbjct: 171 -----------------GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD 213
Query: 229 RDRLFQSI 236
++LF+ I
Sbjct: 214 HEKLFELI 221
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 80/157 (50%), Gaps = 20/157 (12%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE ++ L HP++V+LL+ +E LY+VFE++ D+ + A G +
Sbjct: 52 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGI--PLPLIKS 108
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y+ Q+L+ L +CH + ++HRD+KP LL N E + +KL FG+A G
Sbjct: 109 YLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGA--IKLADFGLARAF---------GV 156
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
+ YT H + T Y APE++ K Y VDIW
Sbjct: 157 PVRTYT----HEVVTLWYRAPEILLGCKYYSTAVDIW 189
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 80/157 (50%), Gaps = 20/157 (12%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE ++ L HP++V+LL+ +E LY+VFE++ D+ + A G +
Sbjct: 50 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGI--PLPLIKS 106
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y+ Q+L+ L +CH + ++HRD+KP LL N E + +KL FG+A G
Sbjct: 107 YLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGA--IKLADFGLARAF---------GV 154
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
+ YT H + T Y APE++ K Y VDIW
Sbjct: 155 PVRTYT----HEVVTLWYRAPEILLGCKYYSTAVDIW 187
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 80/157 (50%), Gaps = 20/157 (12%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE ++ L HP++V+LL+ +E LY+VFE++ D+ + A G +
Sbjct: 51 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGI--PLPLIKS 107
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y+ Q+L+ L +CH + ++HRD+KP LL N E + +KL FG+A G
Sbjct: 108 YLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGA--IKLADFGLARAF---------GV 155
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
+ YT H + T Y APE++ K Y VDIW
Sbjct: 156 PVRTYT----HEVVTLWYRAPEILLGCKYYSTAVDIW 188
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 24/190 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E I + P +V+L ++ LYMV EY G ++ F +RR +SE A Y
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM-FSHLRRIGR---FSEPHARFY 146
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
Q++ Y H D+I+RD+KP +++ + +++ FG A +++
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLMI---DQQGYIQVTDFGFAKRVKG---------- 193
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSRD-RLF 233
+ GTP Y+APE+I + Y K VD W PF + +++
Sbjct: 194 ------RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 234 QSITKGKLHI 243
+ I GK+
Sbjct: 248 EKIVSGKVRF 257
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 80/157 (50%), Gaps = 20/157 (12%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE ++ L HP++V+LL+ +E LY+VFE++ D+ + A G +
Sbjct: 50 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGI--PLPLIKS 106
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y+ Q+L+ L +CH + ++HRD+KP LL N E + +KL FG+A G
Sbjct: 107 YLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGA--IKLADFGLARAF---------GV 154
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
+ YT H + T Y APE++ K Y VDIW
Sbjct: 155 PVRTYT----HEVVTLWYRAPEILLGCKYYSTAVDIW 187
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 80/157 (50%), Gaps = 20/157 (12%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE ++ L HP++V+LL+ +E LY+VFE++ D+ + A G +
Sbjct: 58 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGI--PLPLIKS 114
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y+ Q+L+ L +CH + ++HRD+KP LL N E + +KL FG+A G
Sbjct: 115 YLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGA--IKLADFGLARAF---------GV 162
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
+ YT H + T Y APE++ K Y VDIW
Sbjct: 163 PVRTYT----HEVVTLWYRAPEILLGCKYYSTAVDIW 195
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 80/157 (50%), Gaps = 20/157 (12%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE ++ L HP++V+LL+ +E LY+VFE++ D+ + A G +
Sbjct: 51 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGI--PLPLIKS 107
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y+ Q+L+ L +CH + ++HRD+KP LL N E + +KL FG+A G
Sbjct: 108 YLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGA--IKLADFGLARAF---------GV 155
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
+ YT H + T Y APE++ K Y VDIW
Sbjct: 156 PVRTYT----HEVVTLWYRAPEILLGCKYYSTAVDIW 188
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 87/188 (46%), Gaps = 30/188 (15%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E + +HP + L ++ + L V EY +G ++ F + R V+SE A Y
Sbjct: 60 ENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRER----VFSEDRARFY 115
Query: 115 MRQVLEALRYCH-ENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQ-LQDG---QLYC 169
+++ AL Y H E ++++RD+K ++L + +K+ FG+ + ++DG + +C
Sbjct: 116 GAEIVSALDYLHSEKNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKXFC 172
Query: 170 SGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSR 229
GTP Y+APEV+ED YG+ VD W PF
Sbjct: 173 -----------------GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD 215
Query: 230 -DRLFQSI 236
++LF+ I
Sbjct: 216 HEKLFELI 223
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 79/159 (49%), Gaps = 24/159 (15%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEY--MDGSDICFEIVRRATAGFVYSEAVA 111
RE ++ L HP++V+LL+ +E LY+VFE+ MD D A+A +
Sbjct: 53 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFM-----DASALTGIPLPLI 107
Query: 112 SHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSG 171
Y+ Q+L+ L +CH + ++HRD+KP LL N E + +KL FG+A
Sbjct: 108 KSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGA--IKLADFGLARAF--------- 155
Query: 172 GERLDHYTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
G + Y H + T Y APE++ K Y VDIW
Sbjct: 156 GVPVRTYX----HEVVTLWYRAPEILLGCKYYSTAVDIW 190
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 78/165 (47%), Gaps = 25/165 (15%)
Query: 49 EADLKREATICHMLKHPHVVELLETY----SSEGMLYMVFEYMDGSDICFEIVRRATAGF 104
E +L A+ C PH+V +++ Y + L +V E +DG ++ I R F
Sbjct: 104 EVELHWRASQC-----PHIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAF 158
Query: 105 VYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQD 164
+E AS + + EA++Y H +I HRD+KP +L +K +A +KL FG A
Sbjct: 159 --TEREASEIXKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA----- 211
Query: 165 GQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
E H + TP+Y+APEV+ +KY K D W
Sbjct: 212 -------KETTSHNSLTTP--CYTPYYVAPEVLGPEKYDKSCDXW 247
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 82/190 (43%), Gaps = 24/190 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E I + P + +L ++ LYMV EY G ++ F +RR +SE A Y
Sbjct: 92 EKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEM-FSHLRRIGR---FSEPHARFY 147
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
Q++ Y H D+I+RD+KP +++ + +K+ FG A +++
Sbjct: 148 AAQIVLTFEYLHSLDLIYRDLKPENLMI---DQQGYIKVTDFGFAKRVKG---------- 194
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSRD-RLF 233
+ GTP Y+APE+I + Y K VD W PF + +++
Sbjct: 195 ------RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 234 QSITKGKLHI 243
+ I GK+
Sbjct: 249 EKIVSGKVRF 258
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 79/159 (49%), Gaps = 24/159 (15%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEY--MDGSDICFEIVRRATAGFVYSEAVA 111
RE ++ L HP++V+LL+ +E LY+VFE+ MD D A+A +
Sbjct: 54 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFM-----DASALTGIPLPLI 108
Query: 112 SHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSG 171
Y+ Q+L+ L +CH + ++HRD+KP LL N E + +KL FG+A
Sbjct: 109 KSYLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGA--IKLADFGLARAF--------- 156
Query: 172 GERLDHYTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
G + Y H + T Y APE++ K Y VDIW
Sbjct: 157 GVPVRTYX----HEVVTLWYRAPEILLGCKYYSTAVDIW 191
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 82/190 (43%), Gaps = 24/190 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E I + P + +L ++ LYMV EY G ++ F +RR +SE A Y
Sbjct: 92 EKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEM-FSHLRRIGR---FSEPHARFY 147
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
Q++ Y H D+I+RD+KP +++ + +K+ FG A +++
Sbjct: 148 AAQIVLTFEYLHSLDLIYRDLKPENLMI---DQQGYIKVTDFGFAKRVKG---------- 194
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSRD-RLF 233
+ GTP Y+APE+I + Y K VD W PF + +++
Sbjct: 195 ------RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 234 QSITKGKLHI 243
+ I GK+
Sbjct: 249 EKIVSGKVRF 258
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 24/190 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E I + P +V+L ++ LYMV EY+ G ++ F +RR + E A Y
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM-FSHLRRIGR---FXEPHARFY 146
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
Q++ Y H D+I+RD+KP +L+ + +++ FG A +++
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG---------- 193
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSRD-RLF 233
+ GTP Y+APE+I + Y K VD W PF + +++
Sbjct: 194 ------RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 234 QSITKGKLHI 243
+ I GK+
Sbjct: 248 EKIVSGKVRF 257
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 24/190 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E I + P +V+L ++ LYMV EY+ G ++ F +RR + E A Y
Sbjct: 86 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM-FSHLRRIGR---FXEPHARFY 141
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
Q++ Y H D+I+RD+KP +L+ + +++ FG A +++
Sbjct: 142 AAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK----------- 187
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSRD-RLF 233
+ GTP Y+APE+I + Y K VD W PF + +++
Sbjct: 188 -----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 242
Query: 234 QSITKGKLHI 243
+ I GK+
Sbjct: 243 EKIVSGKVRF 252
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 24/190 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E I + P +V+L ++ LYMV EY+ G ++ F +RR + E A Y
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM-FSHLRRIGR---FXEPHARFY 146
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
Q++ Y H D+I+RD+KP +L+ + +++ FG A +++
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK----------- 192
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSRD-RLF 233
+ GTP Y+APE+I + Y K VD W PF + +++
Sbjct: 193 -----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 234 QSITKGKLHI 243
+ I GK+
Sbjct: 248 EKIVSGKVRF 257
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 24/190 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E I + P +V+L ++ LYMV EY+ G ++ F +RR + E A Y
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM-FSHLRRIGR---FXEPHARFY 146
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
Q++ Y H D+I+RD+KP +L+ + +++ FG A +++
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG---------- 193
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSRD-RLF 233
+ GTP Y+APE+I + Y K VD W PF + +++
Sbjct: 194 ------RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 234 QSITKGKLHI 243
+ I GK+
Sbjct: 248 EKIVSGKVRF 257
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 24/190 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E I + P +V+L ++ LYMV EY+ G ++ F +RR + E A Y
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM-FSHLRRIGR---FXEPHARFY 146
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
Q++ Y H D+I+RD+KP +L+ + +++ FG A +++
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK----------- 192
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSRD-RLF 233
+ GTP Y+APE+I + Y K VD W PF + +++
Sbjct: 193 -----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 234 QSITKGKLHI 243
+ I GK+
Sbjct: 248 EKIVSGKVRF 257
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 24/190 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E I + P +V+L ++ LYMV EY+ G ++ F +RR + E A Y
Sbjct: 112 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM-FSHLRRIGR---FXEPHARFY 167
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
Q++ Y H D+I+RD+KP +L+ + +++ FG A +++
Sbjct: 168 AAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG---------- 214
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSRD-RLF 233
+ GTP Y+APE+I + Y K VD W PF + +++
Sbjct: 215 ------RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 268
Query: 234 QSITKGKLHI 243
+ I GK+
Sbjct: 269 EKIVSGKVRF 278
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 24/190 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E I + P +V+L ++ LYMV EY+ G ++ F +RR + E A Y
Sbjct: 84 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM-FSHLRRIGR---FXEPHARFY 139
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
Q++ Y H D+I+RD+KP +L+ + +++ FG A +++
Sbjct: 140 AAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK----------- 185
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSRD-RLF 233
+ GTP Y+APE+I + Y K VD W PF + +++
Sbjct: 186 -----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 240
Query: 234 QSITKGKLHI 243
+ I GK+
Sbjct: 241 EKIVSGKVRF 250
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 24/190 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E I + P +V+L ++ LYMV EY+ G ++ F +RR + E A Y
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM-FSHLRRIGR---FXEPHARFY 146
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
Q++ Y H D+I+RD+KP +L+ + +++ FG A +++
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK----------- 192
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSRD-RLF 233
+ GTP Y+APE+I + Y K VD W PF + +++
Sbjct: 193 -----GRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 234 QSITKGKLHI 243
+ I GK+
Sbjct: 248 EKIVSGKVRF 257
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 24/190 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E I + P +V+L ++ LYMV EY+ G ++ F +RR + E A Y
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEM-FSHLRRIGR---FXEPHARFY 147
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
Q++ Y H D+I+RD+KP +L+ + +++ FG A +++
Sbjct: 148 AAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKG---------- 194
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSRD-RLF 233
+ GTP Y+APE+I + Y K VD W PF + +++
Sbjct: 195 ------RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 234 QSITKGKLHI 243
+ I GK+
Sbjct: 249 EKIVSGKVRF 258
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 80/157 (50%), Gaps = 20/157 (12%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE ++ L HP++V+LL+ +E LY+VFE++ D+ + A G +
Sbjct: 55 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLP--LIKS 111
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y+ Q+L+ L +CH + ++HRD+KP LL N E + +KL FG+A G
Sbjct: 112 YLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGA--IKLADFGLARAF---------GV 159
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
+ YT H + T Y APE++ K Y VDIW
Sbjct: 160 PVRTYT----HEVVTLWYRAPEILLGCKYYSTAVDIW 192
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 80/168 (47%), Gaps = 22/168 (13%)
Query: 42 RLNHYTTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRAT 101
+L E L+RE I L+HP+++ L + +Y++ EY ++ E+ + +
Sbjct: 50 QLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK 109
Query: 102 AGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQ 161
+ E + Y+ ++ AL YCH +IHRDIKP +LL ++ +K+ FG ++
Sbjct: 110 ----FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWSVH 162
Query: 162 LQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+++ GT Y+ PE+IE + + + VD+W
Sbjct: 163 AP---------------SSRRXXLXGTLDYLPPEMIEGRMHDEKVDLW 195
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 82/190 (43%), Gaps = 24/190 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E I + P +V+L ++ LYMV EY G ++ F +RR + E A Y
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEM-FSHLRRIGR---FXEPHARFY 146
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
Q++ Y H D+I+RD+KP +++ + +K+ FG A +++
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLMI---DQQGYIKVTDFGFAKRVKG---------- 193
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSRD-RLF 233
+ GTP Y+APE+I + Y K VD W PF + +++
Sbjct: 194 ------RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 234 QSITKGKLHI 243
+ I GK+
Sbjct: 248 EKIVSGKVRF 257
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 78/162 (48%), Gaps = 22/162 (13%)
Query: 48 TEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYS 107
E L+RE I L+HP+++ + + +Y++ E+ ++ E+ + +
Sbjct: 58 VEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR----FD 113
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQL 167
E ++ +M ++ +AL YCHE +IHRDIKP +L+ K +K+ FG ++
Sbjct: 114 EQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYK---GELKIADFGWSVHAP---- 166
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+ + GT Y+ PE+IE + + + VD+W
Sbjct: 167 -----------SLRRRXMCGTLDYLPPEMIEGKTHDEKVDLW 197
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 73/160 (45%), Gaps = 26/160 (16%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E I P VV+L + + LYMV EYM G D+ + + E A Y
Sbjct: 125 ERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLV-----NLMSNYDVPEKWAKFY 179
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQD-GQLYCSGGE 173
+V+ AL H +IHRD+KP +LL + +KL FG +++ + G ++C
Sbjct: 180 TAEVVLALDAIHSMGLIHRDVKPDNMLL---DKHGHLKLADFGTCMKMDETGMVHCDTA- 235
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQK----YGKPVDIW 209
+GTP Y++PEV++ Q YG+ D W
Sbjct: 236 ------------VGTPDYISPEVLKSQGGDGYYGRECDWW 263
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 78/162 (48%), Gaps = 22/162 (13%)
Query: 48 TEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYS 107
E L+RE I L+HP+++ + + +Y++ E+ ++ E+ + +
Sbjct: 57 VEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR----FD 112
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQL 167
E ++ +M ++ +AL YCHE +IHRDIKP +L+ K +K+ FG ++
Sbjct: 113 EQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYK---GELKIADFGWSVHAP---- 165
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+ + GT Y+ PE+IE + + + VD+W
Sbjct: 166 -----------SLRRRXMCGTLDYLPPEMIEGKTHDEKVDLW 196
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 80/157 (50%), Gaps = 20/157 (12%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE ++ L HP++V+LL+ +E LY+VFE++D D+ + A G +
Sbjct: 54 REISLLKELNHPNIVKLLDVIHTENKLYLVFEHVD-QDLKKFMDASALTGIPLP--LIKS 110
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y+ Q+L+ L +CH + ++HRD+KP LL N E + +KL FG+A G
Sbjct: 111 YLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGA--IKLADFGLARAF---------GV 158
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
+ Y H + T Y APE++ K Y VDIW
Sbjct: 159 PVRTYX----HEVVTLWYRAPEILLGCKYYSTAVDIW 191
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 24/190 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E I + P +V+L ++ LYMV EY+ G ++ F +RR +SE A Y
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM-FSHLRRIGR---FSEPHARFY 146
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
Q++ Y H D+I+RD+KP +L+ + +++ FG A +++
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK----------- 192
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSRD-RLF 233
+ GTP Y+AP +I + Y K VD W PF + +++
Sbjct: 193 -----GRTWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 234 QSITKGKLHI 243
+ I GK+
Sbjct: 248 EKIVSGKVRF 257
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 78/162 (48%), Gaps = 22/162 (13%)
Query: 48 TEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYS 107
E L+RE I L+HP+++ + + +Y++ E+ ++ E+ + +
Sbjct: 57 VEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR----FD 112
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQL 167
E ++ +M ++ +AL YCHE +IHRDIKP +L+ K +K+ FG ++
Sbjct: 113 EQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYK---GELKIADFGWSVHAP---- 165
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+ + GT Y+ PE+IE + + + VD+W
Sbjct: 166 -----------SLRRRXMCGTLDYLPPEMIEGKTHDEKVDLW 196
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 79/157 (50%), Gaps = 20/157 (12%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE ++ L HP++V+LL+ +E LY+VFE++ F A+A +
Sbjct: 50 REISLLKELNHPNIVKLLDVIHTENKLYLVFEHVHQDLKTF---MDASALTGIPLPLIKS 106
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y+ Q+L+ L +CH + ++HRD+KP LL N E + +KL FG+A G
Sbjct: 107 YLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGA--IKLADFGLARAF---------GV 154
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
+ YT H + T Y APE++ K Y VDIW
Sbjct: 155 PVRTYT----HEVVTLWYRAPEILLGCKYYSTAVDIW 187
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 93/189 (49%), Gaps = 29/189 (15%)
Query: 49 EADLKREATICHMLK-HPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYS 107
EA+ ++E T + + HP++V+L E + + ++V E ++G ++ FE +++ +S
Sbjct: 49 EANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGEL-FERIKKKKH---FS 104
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVA-IQLQDGQ 166
E AS+ MR+++ A+ + H+ ++HRD+KP +L ++ ++ +K+ FG A ++ D Q
Sbjct: 105 ETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ 164
Query: 167 LYCSGGERLDHYTTKAGHRIGTP----HYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXX 222
+ TP HY APE++ Y + D+W
Sbjct: 165 ------------------PLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQ 206
Query: 223 XPFVGSRDR 231
PF S DR
Sbjct: 207 VPF-QSHDR 214
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 83/178 (46%), Gaps = 35/178 (19%)
Query: 40 DERLNHYTTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDG---SDICFEI 96
+E L Y E D I HP++V+LL+ + E L+++ E+ G + E+
Sbjct: 48 EEELEDYMVEID------ILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLEL 101
Query: 97 VRRATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGF 156
R T E+ +Q L+AL Y H+N IIHRD+K +L +KL F
Sbjct: 102 ERPLT------ESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFT---LDGDIKLADF 152
Query: 157 GVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVI-----EDQKYGKPVDIW 209
GV+ + + +R D + IGTP++MAPEV+ +D+ Y D+W
Sbjct: 153 GVSAKNTRTXI-----QRRDSF-------IGTPYWMAPEVVMCETSKDRPYDYKADVW 198
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 80/168 (47%), Gaps = 22/168 (13%)
Query: 42 RLNHYTTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRAT 101
+L E L+RE I L+HP+++ L + +Y++ EY ++ E+ + +
Sbjct: 50 QLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK 109
Query: 102 AGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQ 161
+ E + Y+ ++ AL YCH +IHRDIKP +LL ++ +K+ FG ++
Sbjct: 110 ----FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWSVH 162
Query: 162 LQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+++ GT Y+ PE+IE + + + VD+W
Sbjct: 163 AP---------------SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLW 195
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 77/170 (45%), Gaps = 22/170 (12%)
Query: 43 LNHYTTEADLK---REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRR 99
+ E+DL+ +E +I PHVV+ +Y L++V EY G+ +I+R
Sbjct: 59 IKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYC-GAGSVSDIIRL 117
Query: 100 ATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVA 159
E + ++ L+ L Y H IHRDIK +LL N E A KL FGVA
Sbjct: 118 RNKTLTEDEI--ATILQSTLKGLEYLHFMRKIHRDIKAGNILL-NTEGHA--KLADFGVA 172
Query: 160 IQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
QL D K IGTP +MAPEVI++ Y DIW
Sbjct: 173 GQLTD-------------XMAKRNXVIGTPFWMAPEVIQEIGYNCVADIW 209
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 79/168 (47%), Gaps = 22/168 (13%)
Query: 42 RLNHYTTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRAT 101
+L E L+RE I L+HP+++ L + +Y++ EY + E+ + +
Sbjct: 45 QLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSK 104
Query: 102 AGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQ 161
+ E + Y+ ++ AL YCH +IHRDIKP +LL ++ +K+ FG ++
Sbjct: 105 ----FDEQRTATYITELANALSYCHSKKVIHRDIKPENLLLG---SAGELKIADFGWSVH 157
Query: 162 LQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+++ GT Y+ PE+IE + + + VD+W
Sbjct: 158 AP---------------SSRRAALCGTLDYLPPEMIEGRMHDEKVDLW 190
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 74/158 (46%), Gaps = 19/158 (12%)
Query: 52 LKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVA 111
++ E I LKHP ++EL + +Y+V E ++ + R +SE A
Sbjct: 58 VQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKP---FSENEA 114
Query: 112 SHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSG 171
H+M Q++ + Y H + I+HRD+ +LL N +K+ FG+A QL+
Sbjct: 115 RHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMN---IKIADFGLATQLK-------- 163
Query: 172 GERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
HYT GTP+Y++PE+ +G D+W
Sbjct: 164 MPHEKHYTL-----CGTPNYISPEIATRSAHGLESDVW 196
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 26/190 (13%)
Query: 63 KHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEAL 122
+HP+++ L + Y +Y+V E M G ++ +I+R+ +SE AS + + + +
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQK----FFSEREASAVLFTITKTV 129
Query: 123 RYCHENDIIHRDIKPHCVLLANKE-NSAPVKLGGFGVAIQL--QDGQLYCSGGERLDHYT 179
Y H ++HRD+KP +L ++ N +++ FG A QL ++G L
Sbjct: 130 EYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTP--------- 180
Query: 180 TKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSRD----RLFQS 235
T +++APEV+E Q Y DIW PF D +
Sbjct: 181 ------CYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILAR 234
Query: 236 ITKGKLHILG 245
I GK + G
Sbjct: 235 IGSGKFSLSG 244
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 79/168 (47%), Gaps = 22/168 (13%)
Query: 42 RLNHYTTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRAT 101
+L E L+RE I L+HP+++ L + +Y++ EY + E+ + +
Sbjct: 50 QLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK 109
Query: 102 AGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQ 161
+ E + Y+ ++ AL YCH +IHRDIKP +LL ++ +K+ FG ++
Sbjct: 110 ----FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWSV- 161
Query: 162 LQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+ R D GT Y+ PE+IE + + + VD+W
Sbjct: 162 ------HAPSSRRTD--------LCGTLDYLPPEMIEGRMHDEKVDLW 195
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 78/157 (49%), Gaps = 20/157 (12%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE ++ L HP++V+LL+ +E LY+VFE++ F A+A +
Sbjct: 54 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKTF---MDASALTGIPLPLIKS 110
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y+ Q+L+ L +CH + ++HRD+KP LL N E + +KL FG+A G
Sbjct: 111 YLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGA--IKLADFGLARAF---------GV 158
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
+ Y H + T Y APE++ K Y VDIW
Sbjct: 159 PVRTYX----HEVVTLWYRAPEILLGCKYYSTAVDIW 191
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 79/168 (47%), Gaps = 22/168 (13%)
Query: 42 RLNHYTTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRAT 101
+L E L+RE I L+HP+++ L + +Y++ EY + E+ + +
Sbjct: 46 QLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK 105
Query: 102 AGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQ 161
+ E + Y+ ++ AL YCH +IHRDIKP +LL ++ +K+ FG ++
Sbjct: 106 ----FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWSV- 157
Query: 162 LQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+ R D GT Y+ PE+IE + + + VD+W
Sbjct: 158 ------HAPSSRRTD--------LCGTLDYLPPEMIEGRMHDEKVDLW 191
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 79/168 (47%), Gaps = 22/168 (13%)
Query: 42 RLNHYTTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRAT 101
+L E L+RE I L+HP+++ L + +Y++ EY + E+ + +
Sbjct: 45 QLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK 104
Query: 102 AGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQ 161
+ E + Y+ ++ AL YCH +IHRDIKP +LL ++ +K+ FG ++
Sbjct: 105 ----FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWSV- 156
Query: 162 LQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+ R D GT Y+ PE+IE + + + VD+W
Sbjct: 157 ------HAPSSRRTD--------LCGTLDYLPPEMIEGRMHDEKVDLW 190
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 82/178 (46%), Gaps = 36/178 (20%)
Query: 40 DERLNHYTTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDG---SDICFEI 96
+E L Y E D I HP++V+LL+ + E L+++ E+ G + E+
Sbjct: 75 EEELEDYMVEID------ILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLEL 128
Query: 97 VRRATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGF 156
R T E+ +Q L+AL Y H+N IIHRD+K +L +KL F
Sbjct: 129 ERPLT------ESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFT---LDGDIKLADF 179
Query: 157 GVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVI-----EDQKYGKPVDIW 209
GV+ + +R D + IGTP++MAPEV+ +D+ Y D+W
Sbjct: 180 GVSAK------NTRTIQRRDSF-------IGTPYWMAPEVVMCETSKDRPYDYKADVW 224
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 79/157 (50%), Gaps = 20/157 (12%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE ++ L HP++V+LL+ +E LY+VFE++ + + A+A +
Sbjct: 52 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKS 108
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y+ Q+L+ L +CH + ++HRD+KP LL N E + +KL FG+A G
Sbjct: 109 YLFQLLQGLAFCHSHRVLHRDLKPEN-LLINTEGA--IKLADFGLARAF---------GV 156
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
+ Y H + T Y APE++ K Y VDIW
Sbjct: 157 PVRTYX----HEVVTLWYRAPEILLGCKYYSTAVDIW 189
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 79/168 (47%), Gaps = 22/168 (13%)
Query: 42 RLNHYTTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRAT 101
+L E L+RE I L+HP+++ L + +Y++ EY + E+ + +
Sbjct: 45 QLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK 104
Query: 102 AGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQ 161
+ E + Y+ ++ AL YCH +IHRDIKP +LL ++ +K+ FG ++
Sbjct: 105 ----FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWSV- 156
Query: 162 LQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+ R D GT Y+ PE+IE + + + VD+W
Sbjct: 157 ------HAPSSRRTD--------LCGTLDYLPPEMIEGRMHDEKVDLW 190
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 82/183 (44%), Gaps = 17/183 (9%)
Query: 50 ADLKREATICHMLKH-PHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSE 108
A++ E + + K P V+ L E Y + + ++ EY G +I F + A V SE
Sbjct: 73 AEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEI-FSLCLPELAEMV-SE 130
Query: 109 AVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLY 168
++Q+LE + Y H+N+I+H D+KP +LL++ +K+ FG++
Sbjct: 131 NDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMS--------- 181
Query: 169 CSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGS 228
R + + +GTP Y+APE++ D+W PFVG
Sbjct: 182 -----RKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGE 236
Query: 229 RDR 231
++
Sbjct: 237 DNQ 239
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 82/178 (46%), Gaps = 36/178 (20%)
Query: 40 DERLNHYTTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDG---SDICFEI 96
+E L Y E D I HP++V+LL+ + E L+++ E+ G + E+
Sbjct: 75 EEELEDYMVEID------ILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLEL 128
Query: 97 VRRATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGF 156
R T E+ +Q L+AL Y H+N IIHRD+K +L +KL F
Sbjct: 129 ERPLT------ESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFT---LDGDIKLADF 179
Query: 157 GVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVI-----EDQKYGKPVDIW 209
GV+ + +R D + IGTP++MAPEV+ +D+ Y D+W
Sbjct: 180 GVSAK------NTRXIQRRDSF-------IGTPYWMAPEVVMCETSKDRPYDYKADVW 224
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 79/168 (47%), Gaps = 22/168 (13%)
Query: 42 RLNHYTTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRAT 101
+L E L+RE I L+HP+++ L + +Y++ EY + E+ + +
Sbjct: 48 QLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK 107
Query: 102 AGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQ 161
+ E + Y+ ++ AL YCH +IHRDIKP +LL ++ +K+ FG ++
Sbjct: 108 ----FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWSVH 160
Query: 162 LQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+++ GT Y+ PE+IE + + + VD+W
Sbjct: 161 AP---------------SSRRAALCGTLDYLPPEMIEGRMHDEKVDLW 193
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 70.5 bits (171), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 79/157 (50%), Gaps = 20/157 (12%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE ++ L HP++V+LL+ +E LY+VFE++ + + A+A +
Sbjct: 54 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIKS 110
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y+ Q+L+ L +CH + ++HRD+KP LL N E + +KL FG+A G
Sbjct: 111 YLFQLLQGLAFCHSHRVLHRDLKPEN-LLINTEGA--IKLADFGLARAF---------GV 158
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
+ Y H + T Y APE++ K Y VDIW
Sbjct: 159 PVRTYX----HEVVTLWYRAPEILLGCKYYSTAVDIW 191
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 79/168 (47%), Gaps = 22/168 (13%)
Query: 42 RLNHYTTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRAT 101
+L E L+RE I L+HP+++ L + +Y++ EY + E+ + +
Sbjct: 45 QLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK 104
Query: 102 AGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQ 161
+ E + Y+ ++ AL YCH +IHRDIKP +LL ++ +K+ FG ++
Sbjct: 105 ----FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWSVH 157
Query: 162 LQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+++ GT Y+ PE+IE + + + VD+W
Sbjct: 158 AP---------------SSRRAALCGTLDYLPPEMIEGRMHDEKVDLW 190
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 82/178 (46%), Gaps = 36/178 (20%)
Query: 40 DERLNHYTTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDG---SDICFEI 96
+E L Y E D I HP++V+LL+ + E L+++ E+ G + E+
Sbjct: 75 EEELEDYMVEID------ILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLEL 128
Query: 97 VRRATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGF 156
R T E+ +Q L+AL Y H+N IIHRD+K +L +KL F
Sbjct: 129 ERPLT------ESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFT---LDGDIKLADF 179
Query: 157 GVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVI-----EDQKYGKPVDIW 209
GV+ + +R D + IGTP++MAPEV+ +D+ Y D+W
Sbjct: 180 GVSAK------NTRXIQRRDXF-------IGTPYWMAPEVVMCETSKDRPYDYKADVW 224
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 79/168 (47%), Gaps = 22/168 (13%)
Query: 42 RLNHYTTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRAT 101
+L E L+RE I L+HP+++ L + +Y++ EY + E+ + +
Sbjct: 45 QLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK 104
Query: 102 AGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQ 161
+ E + Y+ ++ AL YCH +IHRDIKP +LL ++ +K+ FG ++
Sbjct: 105 ----FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWSVH 157
Query: 162 LQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+++ GT Y+ PE+IE + + + VD+W
Sbjct: 158 AP---------------SSRRTELCGTLDYLPPEMIEGRMHDEKVDLW 190
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 79/168 (47%), Gaps = 22/168 (13%)
Query: 42 RLNHYTTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRAT 101
+L E L+RE I L+HP+++ L + +Y++ EY + E+ + +
Sbjct: 47 QLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK 106
Query: 102 AGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQ 161
+ E + Y+ ++ AL YCH +IHRDIKP +LL ++ +K+ FG ++
Sbjct: 107 ----FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIANFGWSVH 159
Query: 162 LQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+++ GT Y+ PE+IE + + + VD+W
Sbjct: 160 AP---------------SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLW 192
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 77/175 (44%), Gaps = 21/175 (12%)
Query: 63 KHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEAL 122
K P + +L + + LY V EY++G D+ + I + + E A Y ++ L
Sbjct: 79 KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGR----FKEPHAVFYAAEIAIGL 134
Query: 123 RYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKA 182
+ II+RD+K V+L ++ +K+ FG+ + D TTK
Sbjct: 135 FFLQSKGIIYRDLKLDNVML---DSEGHIKIADFGMCKE-----------NIWDGVTTKX 180
Query: 183 GHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVG-SRDRLFQSI 236
GTP Y+APE+I Q YGK VD W PF G D LFQSI
Sbjct: 181 --FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSI 233
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 24/190 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E I + P +V+L ++ LYMV EY+ G ++ F +RR +SE A Y
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEM-FSHLRRIGR---FSEPHARFY 146
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
Q++ Y H D+I+RD+KP +L+ + +++ FG A +++
Sbjct: 147 AAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVK----------- 192
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSRD-RLF 233
+ GTP +APE+I + Y K VD W PF + +++
Sbjct: 193 -----GRTWXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 234 QSITKGKLHI 243
+ I GK+
Sbjct: 248 EKIVSGKVRF 257
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 79/168 (47%), Gaps = 22/168 (13%)
Query: 42 RLNHYTTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRAT 101
+L E L+RE I L+HP+++ L + +Y++ EY + E+ + +
Sbjct: 71 QLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK 130
Query: 102 AGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQ 161
+ E + Y+ ++ AL YCH +IHRDIKP +LL ++ +K+ FG ++
Sbjct: 131 ----FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWSVH 183
Query: 162 LQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+++ GT Y+ PE+IE + + + VD+W
Sbjct: 184 AP---------------SSRRDDLCGTLDYLPPEMIEGRMHDEKVDLW 216
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 79/168 (47%), Gaps = 22/168 (13%)
Query: 42 RLNHYTTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRAT 101
+L E L+RE I L+HP+++ L + +Y++ EY + E+ + +
Sbjct: 48 QLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK 107
Query: 102 AGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQ 161
+ E + Y+ ++ AL YCH +IHRDIKP +LL ++ +K+ FG ++
Sbjct: 108 ----FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIANFGWSVH 160
Query: 162 LQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+++ GT Y+ PE+IE + + + VD+W
Sbjct: 161 AP---------------SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLW 193
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 79/168 (47%), Gaps = 22/168 (13%)
Query: 42 RLNHYTTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRAT 101
+L E L+RE I L+HP+++ L + +Y++ EY + E+ + +
Sbjct: 48 QLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK 107
Query: 102 AGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQ 161
+ E + Y+ ++ AL YCH +IHRDIKP +LL ++ +K+ FG ++
Sbjct: 108 ----FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWSVH 160
Query: 162 LQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+++ GT Y+ PE+IE + + + VD+W
Sbjct: 161 AP---------------SSRRDDLCGTLDYLPPEMIEGRMHDEKVDLW 193
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 79/168 (47%), Gaps = 22/168 (13%)
Query: 42 RLNHYTTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRAT 101
+L E L+RE I L+HP+++ L + +Y++ EY + E+ + +
Sbjct: 45 QLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK 104
Query: 102 AGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQ 161
+ E + Y+ ++ AL YCH +IHRDIKP +LL ++ +K+ FG ++
Sbjct: 105 ----FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWSVH 157
Query: 162 LQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+++ GT Y+ PE+IE + + + VD+W
Sbjct: 158 AP---------------SSRRTXLCGTLDYLPPEMIEGRMHDEKVDLW 190
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 79/157 (50%), Gaps = 20/157 (12%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE ++ L HP++V+LL+ +E LY+VFE++ D+ + A G +
Sbjct: 51 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGI--PLPLIKS 107
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y+ Q+L+ L +CH + ++HRD+KP LL N E + +KL FG+A G
Sbjct: 108 YLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGA--IKLADFGLARAF---------GV 155
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
+ Y H + T Y APE++ K Y VDIW
Sbjct: 156 PVRTYX----HEVVTLWYRAPEILLGCKYYSTAVDIW 188
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 79/157 (50%), Gaps = 20/157 (12%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE ++ L HP++V+LL+ +E LY+VFE++ D+ + A G +
Sbjct: 55 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGI--PLPLIKS 111
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y+ Q+L+ L +CH + ++HRD+KP LL N E + +KL FG+A G
Sbjct: 112 YLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGA--IKLADFGLARAF---------GV 159
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
+ Y H + T Y APE++ K Y VDIW
Sbjct: 160 PVRTYX----HEVVTLWYRAPEILLGCKYYSTAVDIW 192
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 79/157 (50%), Gaps = 20/157 (12%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE ++ L HP++V+LL+ +E LY+VFE++ D+ + A G +
Sbjct: 51 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGI--PLPLIKS 107
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y+ Q+L+ L +CH + ++HRD+KP LL N E + +KL FG+A G
Sbjct: 108 YLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGA--IKLADFGLARAF---------GV 155
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
+ Y H + T Y APE++ K Y VDIW
Sbjct: 156 PVRTYX----HEVVTLWYRAPEILLGCKYYSTAVDIW 188
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 79/159 (49%), Gaps = 24/159 (15%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYM--DGSDICFEIVRRATAGFVYSEAVA 111
RE ++ L HP++V+LL+ +E LY+VFE++ D D A+A +
Sbjct: 51 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKDFM-----DASALTGIPLPLI 105
Query: 112 SHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSG 171
Y+ Q+L+ L +CH + ++HRD+KP LL N E + +KL FG+A
Sbjct: 106 KSYLFQLLQGLAFCHSHRVLHRDLKPEN-LLINTEGA--IKLADFGLARAF--------- 153
Query: 172 GERLDHYTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
G + Y H + T Y APE++ K Y VDIW
Sbjct: 154 GVPVRTYX----HEVVTLWYRAPEILLGCKYYSTAVDIW 188
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 81/190 (42%), Gaps = 24/190 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E I + P + +L ++ LYMV EY G ++ F +RR + E A Y
Sbjct: 92 EKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEM-FSHLRRIGR---FXEPHARFY 147
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
Q++ Y H D+I+RD+KP +++ + +K+ FG A +++
Sbjct: 148 AAQIVLTFEYLHSLDLIYRDLKPENLMI---DQQGYIKVTDFGFAKRVKG---------- 194
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSRD-RLF 233
+ GTP Y+APE+I + Y K VD W PF + +++
Sbjct: 195 ------RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 234 QSITKGKLHI 243
+ I GK+
Sbjct: 249 EKIVSGKVRF 258
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 79/157 (50%), Gaps = 20/157 (12%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE ++ L HP++V+LL+ +E LY+VFE++ D+ + A G +
Sbjct: 51 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGI--PLPLIKS 107
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y+ Q+L+ L +CH + ++HRD+KP LL N E + +KL FG+A G
Sbjct: 108 YLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGA--IKLADFGLARAF---------GV 155
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
+ Y H + T Y APE++ K Y VDIW
Sbjct: 156 PVRTYX----HEVVTLWYRAPEILLGCKYYSTAVDIW 188
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 79/157 (50%), Gaps = 20/157 (12%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE ++ L HP++V+LL+ +E LY+VFE++ D+ + A G +
Sbjct: 52 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGI--PLPLIKS 108
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y+ Q+L+ L +CH + ++HRD+KP LL N E + +KL FG+A G
Sbjct: 109 YLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGA--IKLADFGLARAF---------GV 156
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
+ Y H + T Y APE++ K Y VDIW
Sbjct: 157 PVRTYX----HEVVTLWYRAPEILLGCKYYSTAVDIW 189
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 77/175 (44%), Gaps = 21/175 (12%)
Query: 63 KHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEAL 122
K P + +L + + LY V EY++G D+ + I + + E A Y ++ L
Sbjct: 400 KPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGR----FKEPHAVFYAAEIAIGL 455
Query: 123 RYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKA 182
+ II+RD+K V+L ++ +K+ FG+ + D TTK
Sbjct: 456 FFLQSKGIIYRDLKLDNVML---DSEGHIKIADFGMCKE-----------NIWDGVTTKX 501
Query: 183 GHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVG-SRDRLFQSI 236
GTP Y+APE+I Q YGK VD W PF G D LFQSI
Sbjct: 502 --FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSI 554
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 79/168 (47%), Gaps = 22/168 (13%)
Query: 42 RLNHYTTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRAT 101
+L E L+RE I L+HP+++ L + +Y++ EY + E+ + +
Sbjct: 47 QLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK 106
Query: 102 AGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQ 161
+ E + Y+ ++ AL YCH +IHRDIKP +LL ++ +K+ FG ++
Sbjct: 107 ----FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWSVH 159
Query: 162 LQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+++ GT Y+ PE+IE + + + VD+W
Sbjct: 160 AP---------------SSRRXXLCGTLDYLPPEMIEGRMHDEKVDLW 192
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 79/157 (50%), Gaps = 20/157 (12%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE ++ L HP++V+LL+ +E LY+VFE++ D+ + A G +
Sbjct: 53 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGI--PLPLIKS 109
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y+ Q+L+ L +CH + ++HRD+KP LL N E + +KL FG+A G
Sbjct: 110 YLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGA--IKLADFGLARAF---------GV 157
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
+ Y H + T Y APE++ K Y VDIW
Sbjct: 158 PVRTYX----HEVVTLWYRAPEILLGCKYYSTAVDIW 190
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 79/157 (50%), Gaps = 20/157 (12%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE ++ L HP++V+LL+ +E LY+VFE++ D+ + A G +
Sbjct: 51 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGI--PLPLIKS 107
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y+ Q+L+ L +CH + ++HRD+KP LL N E + +KL FG+A G
Sbjct: 108 YLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGA--IKLADFGLARAF---------GV 155
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
+ Y H + T Y APE++ K Y VDIW
Sbjct: 156 PVRTYX----HEVVTLWYRAPEILLGCKYYSTAVDIW 188
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 79/168 (47%), Gaps = 22/168 (13%)
Query: 42 RLNHYTTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRAT 101
+L E L+RE I L+HP+++ L + +Y++ EY + E+ + +
Sbjct: 45 QLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK 104
Query: 102 AGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQ 161
+ E + Y+ ++ AL YCH +IHRDIKP +LL ++ +K+ FG ++
Sbjct: 105 ----FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWSVH 157
Query: 162 LQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+++ GT Y+ PE+IE + + + VD+W
Sbjct: 158 AP---------------SSRRXXLCGTLDYLPPEMIEGRMHDEKVDLW 190
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 76/161 (47%), Gaps = 19/161 (11%)
Query: 49 EADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSE 108
EA E I + VV L Y ++ L +V M+G D+ F I AGF E
Sbjct: 228 EAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGF--PE 285
Query: 109 AVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLY 168
A A Y ++ L H I++RD+KP +LL ++ +++ G+A+ + +GQ
Sbjct: 286 ARAVFYAAEICCGLEDLHRERIVYRDLKPENILL---DDHGHIRISDLGLAVHVPEGQ-- 340
Query: 169 CSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
T K R+GT YMAPEV+++++Y D W
Sbjct: 341 ----------TIKG--RVGTVGYMAPEVVKNERYTFSPDWW 369
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 79/157 (50%), Gaps = 20/157 (12%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE ++ L HP++V+LL+ +E LY+VFE++ D+ + A G +
Sbjct: 54 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGI--PLPLIKS 110
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y+ Q+L+ L +CH + ++HRD+KP LL N E + +KL FG+A G
Sbjct: 111 YLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGA--IKLADFGLARAF---------GV 158
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
+ Y H + T Y APE++ K Y VDIW
Sbjct: 159 PVRTYX----HEVVTLWYRAPEILLGCKYYSTAVDIW 191
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 79/157 (50%), Gaps = 20/157 (12%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE ++ L HP++V+LL+ +E LY+VFE++ D+ + A G +
Sbjct: 53 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGI--PLPLIKS 109
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y+ Q+L+ L +CH + ++HRD+KP LL N E + +KL FG+A G
Sbjct: 110 YLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGA--IKLADFGLARAF---------GV 157
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
+ Y H + T Y APE++ K Y VDIW
Sbjct: 158 PVRTYX----HEVVTLWYRAPEILLGCKYYSTAVDIW 190
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 79/157 (50%), Gaps = 20/157 (12%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE ++ L HP++V+LL+ +E LY+VFE++ D+ + A G +
Sbjct: 50 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGI--PLPLIKS 106
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y+ Q+L+ L +CH + ++HRD+KP LL N E + +KL FG+A G
Sbjct: 107 YLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGA--IKLADFGLARAF---------GV 154
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
+ Y H + T Y APE++ K Y VDIW
Sbjct: 155 PVRTYX----HEVVTLWYRAPEILLGCKYYSTAVDIW 187
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 79/157 (50%), Gaps = 20/157 (12%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE ++ L HP++V+LL+ +E LY+VFE++ D+ + A G +
Sbjct: 50 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGI--PLPLIKS 106
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y+ Q+L+ L +CH + ++HRD+KP LL N E + +KL FG+A G
Sbjct: 107 YLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGA--IKLADFGLARAF---------GV 154
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
+ Y H + T Y APE++ K Y VDIW
Sbjct: 155 PVRTYX----HEVVTLWYRAPEILLGCKYYSTAVDIW 187
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 79/157 (50%), Gaps = 20/157 (12%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE ++ L HP++V+LL+ +E LY+VFE++ D+ + A G +
Sbjct: 54 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGI--PLPLIKS 110
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y+ Q+L+ L +CH + ++HRD+KP LL N E + +KL FG+A G
Sbjct: 111 YLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGA--IKLADFGLARAF---------GV 158
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
+ Y H + T Y APE++ K Y VDIW
Sbjct: 159 PVRTYX----HEVVTLWYRAPEILLGCKYYSTAVDIW 191
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 79/168 (47%), Gaps = 22/168 (13%)
Query: 42 RLNHYTTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRAT 101
+L E L+RE I L+HP+++ L + +Y++ EY + E+ + +
Sbjct: 48 QLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK 107
Query: 102 AGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQ 161
+ E + Y+ ++ AL YCH +IHRDIKP +LL ++ +K+ FG ++
Sbjct: 108 ----FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWSVH 160
Query: 162 LQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+++ GT Y+ PE+IE + + + VD+W
Sbjct: 161 AP---------------SSRRXXLCGTLDYLPPEMIEGRMHDEKVDLW 193
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 79/168 (47%), Gaps = 22/168 (13%)
Query: 42 RLNHYTTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRAT 101
+L E L+RE I L+HP+++ L + +Y++ EY + E+ + +
Sbjct: 46 QLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK 105
Query: 102 AGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQ 161
+ E + Y+ ++ AL YCH +IHRDIKP +LL ++ +K+ FG ++
Sbjct: 106 ----FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWSVH 158
Query: 162 LQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+++ GT Y+ PE+IE + + + VD+W
Sbjct: 159 AP---------------SSRRDTLCGTLDYLPPEMIEGRMHDEKVDLW 191
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 76/161 (47%), Gaps = 19/161 (11%)
Query: 49 EADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSE 108
EA E I + VV L Y ++ L +V M+G D+ F I AGF E
Sbjct: 228 EAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGF--PE 285
Query: 109 AVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLY 168
A A Y ++ L H I++RD+KP +LL ++ +++ G+A+ + +GQ
Sbjct: 286 ARAVFYAAEICCGLEDLHRERIVYRDLKPENILL---DDHGHIRISDLGLAVHVPEGQ-- 340
Query: 169 CSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
T K R+GT YMAPEV+++++Y D W
Sbjct: 341 ----------TIKG--RVGTVGYMAPEVVKNERYTFSPDWW 369
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 79/157 (50%), Gaps = 20/157 (12%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE ++ L HP++V+LL+ +E LY+VFE++ D+ + A G +
Sbjct: 52 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGI--PLPLIKS 108
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y+ Q+L+ L +CH + ++HRD+KP LL N E + +KL FG+A G
Sbjct: 109 YLFQLLQGLAFCHSHRVLHRDLKPQN-LLINTEGA--IKLADFGLARAF---------GV 156
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
+ Y H + T Y APE++ K Y VDIW
Sbjct: 157 PVRTYX----HEVVTLWYRAPEILLGCKYYSTAVDIW 189
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 79/168 (47%), Gaps = 22/168 (13%)
Query: 42 RLNHYTTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRAT 101
+L E L+RE I L+HP+++ L + +Y++ EY + E+ + +
Sbjct: 48 QLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK 107
Query: 102 AGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQ 161
+ E + Y+ ++ AL YCH +IHRDIKP +LL ++ +K+ FG ++
Sbjct: 108 ----FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWSVH 160
Query: 162 LQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+++ GT Y+ PE+IE + + + VD+W
Sbjct: 161 AP---------------SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLW 193
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 79/168 (47%), Gaps = 22/168 (13%)
Query: 42 RLNHYTTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRAT 101
+L E L+RE I L+HP+++ L + +Y++ EY + E+ + +
Sbjct: 50 QLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK 109
Query: 102 AGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQ 161
+ E + Y+ ++ AL YCH +IHRDIKP +LL ++ +K+ FG ++
Sbjct: 110 ----FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWSVH 162
Query: 162 LQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+++ GT Y+ PE+IE + + + VD+W
Sbjct: 163 AP---------------SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLW 195
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 79/168 (47%), Gaps = 22/168 (13%)
Query: 42 RLNHYTTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRAT 101
+L E L+RE I L+HP+++ L + +Y++ EY + E+ + +
Sbjct: 62 QLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK 121
Query: 102 AGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQ 161
+ E + Y+ ++ AL YCH +IHRDIKP +LL ++ +K+ FG ++
Sbjct: 122 ----FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWSVH 174
Query: 162 LQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+++ GT Y+ PE+IE + + + VD+W
Sbjct: 175 AP---------------SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLW 207
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 79/168 (47%), Gaps = 22/168 (13%)
Query: 42 RLNHYTTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRAT 101
+L E L+RE I L+HP+++ L + +Y++ EY + E+ + +
Sbjct: 49 QLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSR 108
Query: 102 AGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQ 161
+ E + Y+ ++ AL YCH +IHRDIKP +LL ++ +K+ FG ++
Sbjct: 109 ----FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SNGELKIADFGWSVH 161
Query: 162 LQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+++ GT Y+ PE+IE + + + VD+W
Sbjct: 162 AP---------------SSRRDTLCGTLDYLPPEMIEGRMHDEKVDLW 194
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 79/168 (47%), Gaps = 22/168 (13%)
Query: 42 RLNHYTTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRAT 101
+L E L+RE I L+HP+++ L + +Y++ EY + E+ + +
Sbjct: 44 QLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK 103
Query: 102 AGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQ 161
+ E + Y+ ++ AL YCH +IHRDIKP +LL ++ +K+ FG ++
Sbjct: 104 ----FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWSVH 156
Query: 162 LQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+++ GT Y+ PE+IE + + + VD+W
Sbjct: 157 AP---------------SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLW 189
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 79/168 (47%), Gaps = 22/168 (13%)
Query: 42 RLNHYTTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRAT 101
+L E L+RE I L+HP+++ L + +Y++ EY + E+ + +
Sbjct: 48 QLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK 107
Query: 102 AGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQ 161
+ E + Y+ ++ AL YCH +IHRDIKP +LL ++ +K+ FG ++
Sbjct: 108 ----FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWSVH 160
Query: 162 LQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+++ GT Y+ PE+IE + + + VD+W
Sbjct: 161 AP---------------SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLW 193
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 79/168 (47%), Gaps = 22/168 (13%)
Query: 42 RLNHYTTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRAT 101
+L E L+RE I L+HP+++ L + +Y++ EY + E+ + +
Sbjct: 49 QLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK 108
Query: 102 AGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQ 161
+ E + Y+ ++ AL YCH +IHRDIKP +LL ++ +K+ FG ++
Sbjct: 109 ----FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWSVH 161
Query: 162 LQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+++ GT Y+ PE+IE + + + VD+W
Sbjct: 162 AP---------------SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLW 194
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 79/168 (47%), Gaps = 22/168 (13%)
Query: 42 RLNHYTTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRAT 101
+L E L+RE I L+HP+++ L + +Y++ EY + E+ + +
Sbjct: 45 QLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK 104
Query: 102 AGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQ 161
+ E + Y+ ++ AL YCH +IHRDIKP +LL ++ +K+ FG ++
Sbjct: 105 ----FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWSVH 157
Query: 162 LQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+++ GT Y+ PE+IE + + + VD+W
Sbjct: 158 AP---------------SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLW 190
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 78/168 (46%), Gaps = 22/168 (13%)
Query: 42 RLNHYTTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRAT 101
+L E L+RE I L+HP+++ L + +Y++ EY + E+ + +
Sbjct: 50 QLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK 109
Query: 102 AGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQ 161
+ E + Y+ ++ AL YCH +IHRDIKP +LL ++ +K+ FG ++
Sbjct: 110 ----FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWSVH 162
Query: 162 LQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+++ GT Y+ PE IE + + + VD+W
Sbjct: 163 AP---------------SSRRTTLCGTLDYLPPEXIEGRXHDEKVDLW 195
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 79/168 (47%), Gaps = 22/168 (13%)
Query: 42 RLNHYTTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRAT 101
+L E L+RE I L+HP+++ L + +Y++ EY + E+ + +
Sbjct: 71 QLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK 130
Query: 102 AGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQ 161
+ E + Y+ ++ AL YCH +IHRDIKP +LL ++ +K+ FG ++
Sbjct: 131 ----FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWSVH 183
Query: 162 LQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+++ GT Y+ PE+IE + + + VD+W
Sbjct: 184 AP---------------SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLW 216
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 79/157 (50%), Gaps = 20/157 (12%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE ++ L HP++V+LL+ +E LY+VFE++ D+ + A G +
Sbjct: 52 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLP--LIKS 108
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y+ Q+L+ L +CH + ++HRD+KP LL N E + +KL FG+A G
Sbjct: 109 YLFQLLQGLAFCHSHRVLHRDLKPEN-LLINTEGA--IKLADFGLARAF---------GV 156
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
+ Y H + T Y APE++ K Y VDIW
Sbjct: 157 PVRTYX----HEVVTLWYRAPEILLGCKYYSTAVDIW 189
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 79/168 (47%), Gaps = 22/168 (13%)
Query: 42 RLNHYTTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRAT 101
+L E L+RE I L+HP+++ L + +Y++ EY + E+ + +
Sbjct: 49 QLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSR 108
Query: 102 AGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQ 161
+ E + Y+ ++ AL YCH +IHRDIKP +LL ++ +K+ FG ++
Sbjct: 109 ----FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SNGELKIADFGWSVH 161
Query: 162 LQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+++ GT Y+ PE+IE + + + VD+W
Sbjct: 162 AP---------------SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLW 194
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 79/157 (50%), Gaps = 20/157 (12%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE ++ L HP++V+LL+ +E LY+VFE++ D+ + A G +
Sbjct: 53 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGI--PLPLIKS 109
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y+ Q+L+ L +CH + ++HRD+KP LL N E + +KL FG+A G
Sbjct: 110 YLFQLLQGLAFCHSHRVLHRDLKPEN-LLINTEGA--IKLADFGLARAF---------GV 157
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
+ Y H + T Y APE++ K Y VDIW
Sbjct: 158 PVRTYX----HEVVTLWYRAPEILLGCKYYSTAVDIW 190
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 79/168 (47%), Gaps = 22/168 (13%)
Query: 42 RLNHYTTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRAT 101
+L E L+RE I L+HP+++ L + +Y++ EY + E+ + +
Sbjct: 42 QLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK 101
Query: 102 AGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQ 161
+ E + Y+ ++ AL YCH +IHRDIKP +LL ++ +K+ FG ++
Sbjct: 102 ----FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWSVH 154
Query: 162 LQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+++ GT Y+ PE+IE + + + VD+W
Sbjct: 155 AP---------------SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLW 187
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 81/159 (50%), Gaps = 20/159 (12%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFV--YSEAVA 111
RE ++ LKH ++V L + +E L +VFE+MD +D+ + R +
Sbjct: 52 REISLMKELKHENIVRLYDVIHTENKLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLV 110
Query: 112 SHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSG 171
++ Q+L+ L +CHEN I+HRD+KP +L+ + +KLG FG+A
Sbjct: 111 KYFQWQLLQGLAFCHENKILHRDLKPQNLLINKR---GQLKLGDFGLARAF--------- 158
Query: 172 GERLDHYTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
G ++ ++++ + T Y AP+V+ + Y +DIW
Sbjct: 159 GIPVNTFSSE----VVTLWYRAPDVLMGSRTYSTSIDIW 193
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 79/181 (43%), Gaps = 26/181 (14%)
Query: 54 REATICHMLKHPHVVELLETYS--SEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVA 111
+E I L HP+VV+L+E +E LYMVFE ++ V SE A
Sbjct: 85 QEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGP-----VMEVPTLKPLSEDQA 139
Query: 112 SHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSG 171
Y + +++ + Y H IIHRDIKP +L+ +K+ FGV+ + + S
Sbjct: 140 RFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVG---EDGHIKIADFGVSNEFKGSDALLS- 195
Query: 172 GERLDHYTTKAGHRIGTPHYMAPEVIEDQK---YGKPVDIWXXXXXXXXXXXXXXPFVGS 228
+ +GTP +MAPE + + + GK +D+W PF+
Sbjct: 196 ------------NTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDE 243
Query: 229 R 229
R
Sbjct: 244 R 244
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 82/169 (48%), Gaps = 18/169 (10%)
Query: 47 TTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATA---- 102
T+ +L +E HP++V ++ + L++V + + G + +I++ A
Sbjct: 55 TSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSV-LDIIKHIVAKGEH 113
Query: 103 -GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQ 161
V E+ + +R+VLE L Y H+N IHRD+K +LL V++ FGV+
Sbjct: 114 KSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLG---EDGSVQIADFGVSAF 170
Query: 162 LQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
L +GG+ + K +GTP +MAPEV+E + Y DIW
Sbjct: 171 L------ATGGDITRNKVRKT--FVGTPCWMAPEVMEQVRGYDFKADIW 211
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 82/169 (48%), Gaps = 18/169 (10%)
Query: 47 TTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATA---- 102
T+ +L +E HP++V ++ + L++V + + G + +I++ A
Sbjct: 50 TSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSV-LDIIKHIVAKGEH 108
Query: 103 -GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQ 161
V E+ + +R+VLE L Y H+N IHRD+K +LL V++ FGV+
Sbjct: 109 KSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLG---EDGSVQIADFGVSAF 165
Query: 162 LQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
L +GG+ + K +GTP +MAPEV+E + Y DIW
Sbjct: 166 L------ATGGDITRNKVRKT--FVGTPCWMAPEVMEQVRGYDFKADIW 206
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 77/158 (48%), Gaps = 21/158 (13%)
Query: 52 LKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVA 111
L E I H +VV++ +Y L++V E+++G + +IV T + E +A
Sbjct: 89 LFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALT-DIV---THTRMNEEQIA 144
Query: 112 SHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSG 171
+ + VL AL Y H +IHRDIK +LL + +KL FG +C+
Sbjct: 145 TVCL-SVLRALSYLHNQGVIHRDIKSDSILLTS---DGRIKLSDFG----------FCA- 189
Query: 172 GERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
++ K +GTP++MAPEVI YG VDIW
Sbjct: 190 --QVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIW 225
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 80/159 (50%), Gaps = 22/159 (13%)
Query: 52 LKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVA 111
+ E I L +PHVV + + +Y+V E + E+ +R A +E A
Sbjct: 73 MSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSL-LELHKRRKA---VTEPEA 128
Query: 112 SHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQ-DGQLYCS 170
++MRQ ++ ++Y H N +IHRD+K + L + + VK+G FG+A +++ DG+
Sbjct: 129 RYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMD---VKIGDFGLATKIEFDGE---- 181
Query: 171 GGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+ GTP+Y+APEV+ + + VDIW
Sbjct: 182 ----------RKKDLCGTPNYIAPEVLCKKGHSFEVDIW 210
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 80/159 (50%), Gaps = 22/159 (13%)
Query: 52 LKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVA 111
+ E I L +PHVV + + +Y+V E + E+ +R A +E A
Sbjct: 89 MSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSL-LELHKRRKA---VTEPEA 144
Query: 112 SHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQ-DGQLYCS 170
++MRQ ++ ++Y H N +IHRD+K + L + + VK+G FG+A +++ DG+
Sbjct: 145 RYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMD---VKIGDFGLATKIEFDGE---- 197
Query: 171 GGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+ GTP+Y+APEV+ + + VDIW
Sbjct: 198 ----------RKKDLCGTPNYIAPEVLCKKGHSFEVDIW 226
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 80/159 (50%), Gaps = 22/159 (13%)
Query: 52 LKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVA 111
+ E I L +PHVV + + +Y+V E + E+ +R A +E A
Sbjct: 89 MSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSL-LELHKRRKA---VTEPEA 144
Query: 112 SHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQ-DGQLYCS 170
++MRQ ++ ++Y H N +IHRD+K + L + + VK+G FG+A +++ DG+
Sbjct: 145 RYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMD---VKIGDFGLATKIEFDGE---- 197
Query: 171 GGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+ GTP+Y+APEV+ + + VDIW
Sbjct: 198 ----------RKKXLCGTPNYIAPEVLCKKGHSFEVDIW 226
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 80/159 (50%), Gaps = 22/159 (13%)
Query: 52 LKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVA 111
+ E I L +PHVV + + +Y+V E + E+ +R A +E A
Sbjct: 89 MSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSL-LELHKRRKA---VTEPEA 144
Query: 112 SHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQ-DGQLYCS 170
++MRQ ++ ++Y H N +IHRD+K + L + + VK+G FG+A +++ DG+
Sbjct: 145 RYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMD---VKIGDFGLATKIEFDGE---- 197
Query: 171 GGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+ GTP+Y+APEV+ + + VDIW
Sbjct: 198 ----------RKKTLCGTPNYIAPEVLCKKGHSFEVDIW 226
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 26/190 (13%)
Query: 63 KHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEAL 122
+HP+++ L + Y +Y+V E G ++ +I+R+ +SE AS + + + +
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQK----FFSEREASAVLFTITKTV 129
Query: 123 RYCHENDIIHRDIKPHCVLLANKE-NSAPVKLGGFGVAIQL--QDGQLYCSGGERLDHYT 179
Y H ++HRD+KP +L ++ N +++ FG A QL ++G L
Sbjct: 130 EYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTP--------- 180
Query: 180 TKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGSRD----RLFQS 235
T +++APEV+E Q Y DIW PF D +
Sbjct: 181 ------CYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILAR 234
Query: 236 ITKGKLHILG 245
I GK + G
Sbjct: 235 IGSGKFSLSG 244
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 79/168 (47%), Gaps = 22/168 (13%)
Query: 42 RLNHYTTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRAT 101
+L E L+RE I L+HP+++ L + +Y++ EY + E+ + +
Sbjct: 46 QLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK 105
Query: 102 AGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQ 161
+ E + Y+ ++ AL YCH +IHRDIKP +LL ++ +K+ FG +
Sbjct: 106 ----FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWS-- 156
Query: 162 LQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
C +++ GT Y+ PE+IE + + + VD+W
Sbjct: 157 -------CHAP------SSRRTTLSGTLDYLPPEMIEGRMHDEKVDLW 191
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 78/175 (44%), Gaps = 21/175 (12%)
Query: 63 KHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEAL 122
+HP + + T+ ++ L+ V EY++G D+ + I + + + A+ Y +++ L
Sbjct: 77 EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI----QSCHKFDLSRATFYAAEIILGL 132
Query: 123 RYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKA 182
++ H I++RD+K +LL + +K+ FG+ + G K
Sbjct: 133 QFLHSKGIVYRDLKLDNILL---DKDGHIKIADFGMCKENMLGD-------------AKT 176
Query: 183 GHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVGS-RDRLFQSI 236
GTP Y+APE++ QKY VD W PF G + LF SI
Sbjct: 177 NEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI 231
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 79/162 (48%), Gaps = 31/162 (19%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGS-----DICFEIVRRATAGFVYSE 108
RE +I LKH ++V+L + ++ L +VFE++D D+C + TA
Sbjct: 49 REISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTA------ 102
Query: 109 AVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLY 168
++ Q+L + YCH+ ++HRD+KP LL N+E +K+ FG+A
Sbjct: 103 ---KSFLLQLLNGIAYCHDRRVLHRDLKPQN-LLINREGE--LKIADFGLARAF------ 150
Query: 169 CSGGERLDHYTTKAGHRIGTPHYMAPEVI-EDQKYGKPVDIW 209
G + YT H I T Y AP+V+ +KY +DIW
Sbjct: 151 ---GIPVRKYT----HEIVTLWYRAPDVLMGSKKYSTTIDIW 185
Score = 27.7 bits (60), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 1 MLSVDPNKRITIHEVINHKWLK 22
ML +DPN+RIT + + H + K
Sbjct: 264 MLKLDPNQRITAKQALEHAYFK 285
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 16/153 (10%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E I + +V L + ++ L +V M+G DI + I + E A Y
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
Q++ L + H+ +II+RD+KP VLL + N V++ G+A++L+ GQ
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGN---VRISDLGLAVELKAGQ-------- 343
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVD 207
TK GTP +MAPE++ ++Y VD
Sbjct: 344 -----TKTKGYAGTPGFMAPELLLGEEYDFSVD 371
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 16/153 (10%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E I + +V L + ++ L +V M+G DI + I + E A Y
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
Q++ L + H+ +II+RD+KP VLL + N V++ G+A++L+ GQ
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGN---VRISDLGLAVELKAGQ-------- 343
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVD 207
TK GTP +MAPE++ ++Y VD
Sbjct: 344 -----TKTKGYAGTPGFMAPELLLGEEYDFSVD 371
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 78/175 (44%), Gaps = 21/175 (12%)
Query: 63 KHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEAL 122
+HP + + T+ ++ L+ V EY++G D+ + I + + + A+ Y +++ L
Sbjct: 76 EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHI----QSCHKFDLSRATFYAAEIILGL 131
Query: 123 RYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKA 182
++ H I++RD+K +LL + +K+ FG+ + G K
Sbjct: 132 QFLHSKGIVYRDLKLDNILL---DKDGHIKIADFGMCKENMLGD-------------AKT 175
Query: 183 GHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVG-SRDRLFQSI 236
GTP Y+APE++ QKY VD W PF G + LF SI
Sbjct: 176 NXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI 230
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 16/153 (10%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E I + +V L + ++ L +V M+G DI + I + E A Y
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
Q++ L + H+ +II+RD+KP VLL + N V++ G+A++L+ GQ
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGN---VRISDLGLAVELKAGQ-------- 343
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVD 207
TK GTP +MAPE++ ++Y VD
Sbjct: 344 -----TKTKGYAGTPGFMAPELLLGEEYDFSVD 371
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 16/153 (10%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E I + +V L + ++ L +V M+G DI + I + E A Y
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
Q++ L + H+ +II+RD+KP VLL + N V++ G+A++L+ GQ
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGN---VRISDLGLAVELKAGQ-------- 343
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVD 207
TK GTP +MAPE++ ++Y VD
Sbjct: 344 -----TKTKGYAGTPGFMAPELLLGEEYDFSVD 371
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 79/157 (50%), Gaps = 21/157 (13%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE ++ L HP++V L++ SE L +VFE+M+ +++ G ++
Sbjct: 68 REISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKD--LKKVLDENKTGL--QDSQIKI 123
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y+ Q+L + +CH++ I+HRD+KP +L+ + +KL FG+A G
Sbjct: 124 YLYQLLRGVAHCHQHRILHRDLKPQNLLI---NSDGALKLADFGLARAF---------GI 171
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIE-DQKYGKPVDIW 209
+ YT H + T Y AP+V+ +KY VDIW
Sbjct: 172 PVRSYT----HEVVTLWYRAPDVLMGSKKYSTSVDIW 204
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 1 MLSVDPNKRITIHEVINHKWLK 22
ML DPNKRI+ + +NH + K
Sbjct: 284 MLCFDPNKRISARDAMNHPYFK 305
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 79/157 (50%), Gaps = 21/157 (13%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE ++ L HP++V L++ SE L +VFE+M+ +++ G ++
Sbjct: 68 REISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKD--LKKVLDENKTGL--QDSQIKI 123
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y+ Q+L + +CH++ I+HRD+KP +L+ + +KL FG+A G
Sbjct: 124 YLYQLLRGVAHCHQHRILHRDLKPQNLLI---NSDGALKLADFGLARAF---------GI 171
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIE-DQKYGKPVDIW 209
+ YT H + T Y AP+V+ +KY VDIW
Sbjct: 172 PVRSYT----HEVVTLWYRAPDVLMGSKKYSTSVDIW 204
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 1 MLSVDPNKRITIHEVINHKWLK 22
ML DPNKRI+ + +NH + K
Sbjct: 284 MLCFDPNKRISARDAMNHPYFK 305
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 78/158 (49%), Gaps = 21/158 (13%)
Query: 52 LKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVA 111
L E I +H +VVE+ +Y L++V E+++G + +IV T + E +A
Sbjct: 73 LFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT-DIV---THTRMNEEQIA 128
Query: 112 SHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSG 171
+ + VL+AL H +IHRDIK +LL + VKL FG +C+
Sbjct: 129 AVCL-AVLQALSVLHAQGVIHRDIKSDSILLTHDGR---VKLSDFG----------FCA- 173
Query: 172 GERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
++ + +GTP++MAPE+I YG VDIW
Sbjct: 174 --QVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIW 209
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 78/158 (49%), Gaps = 21/158 (13%)
Query: 52 LKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVA 111
L E I +H +VVE+ +Y L++V E+++G + +IV T + E +A
Sbjct: 75 LFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT-DIV---THTRMNEEQIA 130
Query: 112 SHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSG 171
+ + VL+AL H +IHRDIK +LL + VKL FG +C+
Sbjct: 131 AVCL-AVLQALSVLHAQGVIHRDIKSDSILLTHDGR---VKLSDFG----------FCA- 175
Query: 172 GERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
++ + +GTP++MAPE+I YG VDIW
Sbjct: 176 --QVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIW 211
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 79/162 (48%), Gaps = 31/162 (19%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGS-----DICFEIVRRATAGFVYSE 108
RE +I LKH ++V+L + ++ L +VFE++D D+C + TA
Sbjct: 49 REISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTA------ 102
Query: 109 AVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLY 168
++ Q+L + YCH+ ++HRD+KP LL N+E +K+ FG+A
Sbjct: 103 ---KSFLLQLLNGIAYCHDRRVLHRDLKPQN-LLINREGE--LKIADFGLARAF------ 150
Query: 169 CSGGERLDHYTTKAGHRIGTPHYMAPEVI-EDQKYGKPVDIW 209
G + YT H + T Y AP+V+ +KY +DIW
Sbjct: 151 ---GIPVRKYT----HEVVTLWYRAPDVLMGSKKYSTTIDIW 185
Score = 27.7 bits (60), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 1 MLSVDPNKRITIHEVINHKWLK 22
ML +DPN+RIT + + H + K
Sbjct: 264 MLKLDPNQRITAKQALEHAYFK 285
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 79/162 (48%), Gaps = 31/162 (19%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGS-----DICFEIVRRATAGFVYSE 108
RE +I LKH ++V+L + ++ L +VFE++D D+C + TA
Sbjct: 49 REISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTA------ 102
Query: 109 AVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLY 168
++ Q+L + YCH+ ++HRD+KP LL N+E +K+ FG+A
Sbjct: 103 ---KSFLLQLLNGIAYCHDRRVLHRDLKPQN-LLINREGE--LKIADFGLARAF------ 150
Query: 169 CSGGERLDHYTTKAGHRIGTPHYMAPEVI-EDQKYGKPVDIW 209
G + YT H + T Y AP+V+ +KY +DIW
Sbjct: 151 ---GIPVRKYT----HEVVTLWYRAPDVLMGSKKYSTTIDIW 185
Score = 27.7 bits (60), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 1 MLSVDPNKRITIHEVINHKWLK 22
ML +DPN+RIT + + H + K
Sbjct: 264 MLKLDPNQRITAKQALEHAYFK 285
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 77/155 (49%), Gaps = 21/155 (13%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E I +H +VVE+ +Y L++V E+++G + +IV T + E +A+
Sbjct: 198 EVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT-DIV---THTRMNEEQIAAVC 253
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
+ VL+AL H +IHRDIK +LL + VKL FG +C+ +
Sbjct: 254 L-AVLQALSVLHAQGVIHRDIKSDSILLTHDGR---VKLSDFG----------FCA---Q 296
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+ + +GTP++MAPE+I YG VDIW
Sbjct: 297 VSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIW 331
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 78/158 (49%), Gaps = 21/158 (13%)
Query: 52 LKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVA 111
L E I +H +VVE+ +Y L++V E+++G + +IV T + E +A
Sbjct: 64 LFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT-DIV---THTRMNEEQIA 119
Query: 112 SHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSG 171
+ + VL+AL H +IHRDIK +LL + VKL FG +C+
Sbjct: 120 AVCL-AVLQALSVLHAQGVIHRDIKSDSILLTH---DGRVKLSDFG----------FCA- 164
Query: 172 GERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
++ + +GTP++MAPE+I YG VDIW
Sbjct: 165 --QVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIW 200
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 78/158 (49%), Gaps = 21/158 (13%)
Query: 52 LKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVA 111
L E I +H +VVE+ +Y L++V E+++G + +IV T + E +A
Sbjct: 68 LFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT-DIV---THTRMNEEQIA 123
Query: 112 SHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSG 171
+ + VL+AL H +IHRDIK +LL + VKL FG +C+
Sbjct: 124 AVCL-AVLQALSVLHAQGVIHRDIKSDSILLTH---DGRVKLSDFG----------FCA- 168
Query: 172 GERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
++ + +GTP++MAPE+I YG VDIW
Sbjct: 169 --QVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIW 204
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 74/158 (46%), Gaps = 21/158 (13%)
Query: 52 LKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVA 111
L E I +H +VVE+ ++Y L+++ E++ G + +IV + +E
Sbjct: 89 LFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALT-DIVSQVR----LNEEQI 143
Query: 112 SHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSG 171
+ VL+AL Y H +IHRDIK +LL VKL FG +C+
Sbjct: 144 ATVCEAVLQALAYLHAQGVIHRDIKSDSILLTL---DGRVKLSDFG----------FCA- 189
Query: 172 GERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
++ K +GTP++MAPEVI Y VDIW
Sbjct: 190 --QISKDVPKRKXLVGTPYWMAPEVISRSLYATEVDIW 225
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 78/158 (49%), Gaps = 21/158 (13%)
Query: 52 LKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVA 111
L E I +H +VVE+ +Y L++V E+++G + +IV T + E +A
Sbjct: 118 LFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT-DIV---THTRMNEEQIA 173
Query: 112 SHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSG 171
+ + VL+AL H +IHRDIK +LL + VKL FG +C+
Sbjct: 174 AVCL-AVLQALSVLHAQGVIHRDIKSDSILLTHDGR---VKLSDFG----------FCA- 218
Query: 172 GERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
++ + +GTP++MAPE+I YG VDIW
Sbjct: 219 --QVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIW 254
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 82/178 (46%), Gaps = 36/178 (20%)
Query: 40 DERLNHYTTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDG---SDICFEI 96
+E L Y E + I HP++V+LL Y +G L+++ E+ G I E+
Sbjct: 49 EEELEDYIVEIE------ILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLEL 102
Query: 97 VRRATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGF 156
R T E RQ+LEAL + H IIHRD+K VL+ + + ++L F
Sbjct: 103 DRGLT------EPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGD---IRLADF 153
Query: 157 GVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVI-----EDQKYGKPVDIW 209
GV+ + ++ D + IGTP++MAPEV+ +D Y DIW
Sbjct: 154 GVSAK------NLKTLQKRDSF-------IGTPYWMAPEVVMCETMKDTPYDYKADIW 198
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 81/179 (45%), Gaps = 38/179 (21%)
Query: 40 DERLNHYTTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDG---SDICFEI 96
+E L Y E + I HP++V+LL Y +G L+++ E+ G I E+
Sbjct: 57 EEELEDYIVEIE------ILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLEL 110
Query: 97 VRRATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGF 156
R T E RQ+LEAL + H IIHRD+K VL+ + + ++L F
Sbjct: 111 DRGLT------EPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGD---IRLADF 161
Query: 157 GV-AIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVI-----EDQKYGKPVDIW 209
GV A L+ Q K IGTP++MAPEV+ +D Y DIW
Sbjct: 162 GVSAKNLKTLQ--------------KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIW 206
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 79/186 (42%), Gaps = 19/186 (10%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE + L HP V+L T+ + LY Y ++ + +R+ + + E
Sbjct: 82 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL-LKYIRKIGS---FDETCTRF 137
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y +++ AL Y H IIHRD+KP +LL + +++ FG A L
Sbjct: 138 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH---IQITDFGTAKVLSP--------- 185
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPF-VGSRDRL 232
+ +A +GT Y++PE++ ++ K D+W PF G+ +
Sbjct: 186 --ESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLI 243
Query: 233 FQSITK 238
FQ I K
Sbjct: 244 FQKIIK 249
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 81/163 (49%), Gaps = 7/163 (4%)
Query: 48 TEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYS 107
T+ +E + L+HP+V++ + + L + EY+ G + I++ + + +S
Sbjct: 50 TQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTL-RGIIKSMDSQYPWS 108
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQL 167
+ V+ + + + + Y H +IIHRD+ H L+ +N V + FG+A + D +
Sbjct: 109 QRVS--FAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKN---VVVADFGLARLMVDEKT 163
Query: 168 YCSGGERLDHYTTKAGHRI-GTPHYMAPEVIEDQKYGKPVDIW 209
G L K + + G P++MAPE+I + Y + VD++
Sbjct: 164 QPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVF 206
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 79/186 (42%), Gaps = 19/186 (10%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE + L HP V+L T+ + LY Y ++ + +R+ + + E
Sbjct: 78 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL-LKYIRKIGS---FDETCTRF 133
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y +++ AL Y H IIHRD+KP +LL + +++ FG A L
Sbjct: 134 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH---IQITDFGTAKVLSP--------- 181
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPF-VGSRDRL 232
+ +A +GT Y++PE++ ++ K D+W PF G+ +
Sbjct: 182 --ESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLI 239
Query: 233 FQSITK 238
FQ I K
Sbjct: 240 FQKIIK 245
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 79/186 (42%), Gaps = 19/186 (10%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE + L HP V+L T+ + LY Y ++ + +R+ + + E
Sbjct: 82 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL-LKYIRKIGS---FDETCTRF 137
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y +++ AL Y H IIHRD+KP +LL + +++ FG A L
Sbjct: 138 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH---IQITDFGTAKVLSP--------- 185
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPF-VGSRDRL 232
+ +A +GT Y++PE++ ++ K D+W PF G+ +
Sbjct: 186 --ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLI 243
Query: 233 FQSITK 238
FQ I K
Sbjct: 244 FQKIIK 249
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 79/186 (42%), Gaps = 19/186 (10%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE + L HP V+L T+ + LY Y ++ + +R+ + + E
Sbjct: 84 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL-LKYIRKIGS---FDETCTRF 139
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y +++ AL Y H IIHRD+KP +LL + +++ FG A L
Sbjct: 140 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH---IQITDFGTAKVLSP--------- 187
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPF-VGSRDRL 232
+ +A +GT Y++PE++ ++ K D+W PF G+ +
Sbjct: 188 --ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLI 245
Query: 233 FQSITK 238
FQ I K
Sbjct: 246 FQKIIK 251
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 79/186 (42%), Gaps = 19/186 (10%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE + L HP V+L T+ + LY Y ++ + +R+ + + E
Sbjct: 81 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL-LKYIRKIGS---FDETCTRF 136
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y +++ AL Y H IIHRD+KP +LL + +++ FG A L
Sbjct: 137 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH---IQITDFGTAKVLSP--------- 184
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPF-VGSRDRL 232
+ +A +GT Y++PE++ ++ K D+W PF G+ +
Sbjct: 185 --ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLI 242
Query: 233 FQSITK 238
FQ I K
Sbjct: 243 FQKIIK 248
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 79/186 (42%), Gaps = 19/186 (10%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE + L HP V+L T+ + LY Y ++ + +R+ + + E
Sbjct: 79 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL-LKYIRKIGS---FDETCTRF 134
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y +++ AL Y H IIHRD+KP +LL + +++ FG A L
Sbjct: 135 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH---IQITDFGTAKVLSP--------- 182
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPF-VGSRDRL 232
+ +A +GT Y++PE++ ++ K D+W PF G+ +
Sbjct: 183 --ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLI 240
Query: 233 FQSITK 238
FQ I K
Sbjct: 241 FQKIIK 246
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 79/186 (42%), Gaps = 19/186 (10%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE + L HP V+L T+ + LY Y ++ + +R+ + + E
Sbjct: 78 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL-LKYIRKIGS---FDETCTRF 133
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y +++ AL Y H IIHRD+KP +LL + +++ FG A L
Sbjct: 134 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH---IQITDFGTAKVLSP--------- 181
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPF-VGSRDRL 232
+ +A +GT Y++PE++ ++ K D+W PF G+ +
Sbjct: 182 --ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLI 239
Query: 233 FQSITK 238
FQ I K
Sbjct: 240 FQKIIK 245
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 79/186 (42%), Gaps = 19/186 (10%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE + L HP V+L T+ + LY Y ++ + +R+ + + E
Sbjct: 79 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL-LKYIRKIGS---FDETCTRF 134
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y +++ AL Y H IIHRD+KP +LL + +++ FG A L
Sbjct: 135 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH---IQITDFGTAKVLSP--------- 182
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPF-VGSRDRL 232
+ +A +GT Y++PE++ ++ K D+W PF G+ +
Sbjct: 183 --ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLI 240
Query: 233 FQSITK 238
FQ I K
Sbjct: 241 FQKIIK 246
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 79/186 (42%), Gaps = 19/186 (10%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE + L HP V+L T+ + LY Y ++ + +R+ + + E
Sbjct: 81 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL-LKYIRKIGS---FDETCTRF 136
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y +++ AL Y H IIHRD+KP +LL + +++ FG A L
Sbjct: 137 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH---IQITDFGTAKVLSP--------- 184
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPF-VGSRDRL 232
+ +A +GT Y++PE++ ++ K D+W PF G+ +
Sbjct: 185 --ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLI 242
Query: 233 FQSITK 238
FQ I K
Sbjct: 243 FQKIIK 248
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 79/186 (42%), Gaps = 19/186 (10%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE + L HP V+L T+ + LY Y ++ + +R+ + + E
Sbjct: 79 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL-LKYIRKIGS---FDETCTRF 134
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y +++ AL Y H IIHRD+KP +LL + +++ FG A L
Sbjct: 135 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH---IQITDFGTAKVLSP--------- 182
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPF-VGSRDRL 232
+ +A +GT Y++PE++ ++ K D+W PF G+ +
Sbjct: 183 --ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLI 240
Query: 233 FQSITK 238
FQ I K
Sbjct: 241 FQKIIK 246
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 79/186 (42%), Gaps = 19/186 (10%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE + L HP V+L T+ + LY Y ++ + +R+ + + E
Sbjct: 81 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL-LKYIRKIGS---FDETCTRF 136
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y +++ AL Y H IIHRD+KP +LL + +++ FG A L
Sbjct: 137 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH---IQITDFGTAKVLSP--------- 184
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPF-VGSRDRL 232
+ +A +GT Y++PE++ ++ K D+W PF G+ +
Sbjct: 185 --ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLI 242
Query: 233 FQSITK 238
FQ I K
Sbjct: 243 FQKIIK 248
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 79/186 (42%), Gaps = 19/186 (10%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE + L HP V+L T+ + LY Y ++ + +R+ + + E
Sbjct: 63 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL-LKYIRKIGS---FDETCTRF 118
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y +++ AL Y H IIHRD+KP +LL + +++ FG A L
Sbjct: 119 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH---IQITDFGTAKVLSP--------- 166
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPF-VGSRDRL 232
+ +A +GT Y++PE++ ++ K D+W PF G+ +
Sbjct: 167 --ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLI 224
Query: 233 FQSITK 238
FQ I K
Sbjct: 225 FQKIIK 230
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 79/186 (42%), Gaps = 19/186 (10%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE + L HP V+L T+ + LY Y ++ + +R+ + + E
Sbjct: 56 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL-LKYIRKIGS---FDETCTRF 111
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y +++ AL Y H IIHRD+KP +LL + +++ FG A L
Sbjct: 112 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH---IQITDFGTAKVLSP--------- 159
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPF-VGSRDRL 232
+ +A +GT Y++PE++ ++ K D+W PF G+ +
Sbjct: 160 --ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLI 217
Query: 233 FQSITK 238
FQ I K
Sbjct: 218 FQKIIK 223
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 79/186 (42%), Gaps = 19/186 (10%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE + L HP V+L T+ + LY Y ++ + +R+ + + E
Sbjct: 57 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL-LKYIRKIGS---FDETCTRF 112
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y +++ AL Y H IIHRD+KP +LL + +++ FG A L
Sbjct: 113 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH---IQITDFGTAKVLSP--------- 160
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPF-VGSRDRL 232
+ +A +GT Y++PE++ ++ K D+W PF G+ +
Sbjct: 161 --ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLI 218
Query: 233 FQSITK 238
FQ I K
Sbjct: 219 FQKIIK 224
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 79/186 (42%), Gaps = 19/186 (10%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE + L HP V+L T+ + LY Y ++ + +R+ + + E
Sbjct: 79 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL-LKYIRKIGS---FDETCTRF 134
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y +++ AL Y H IIHRD+KP +LL + +++ FG A L
Sbjct: 135 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH---IQITDFGTAKVLSP--------- 182
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPF-VGSRDRL 232
+ +A +GT Y++PE++ ++ K D+W PF G+ +
Sbjct: 183 --ESKQARANAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLI 240
Query: 233 FQSITK 238
FQ I K
Sbjct: 241 FQKIIK 246
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 79/186 (42%), Gaps = 19/186 (10%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE + L HP V+L T+ + LY Y ++ + +R+ + + E
Sbjct: 59 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL-LKYIRKIGS---FDETCTRF 114
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y +++ AL Y H IIHRD+KP +LL + +++ FG A L
Sbjct: 115 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH---IQITDFGTAKVLSP--------- 162
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPF-VGSRDRL 232
+ +A +GT Y++PE++ ++ K D+W PF G+ +
Sbjct: 163 --ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLI 220
Query: 233 FQSITK 238
FQ I K
Sbjct: 221 FQKIIK 226
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 79/186 (42%), Gaps = 19/186 (10%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE + L HP V+L T+ + LY Y ++ + +R+ + + E
Sbjct: 58 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL-LKYIRKIGS---FDETCTRF 113
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y +++ AL Y H IIHRD+KP +LL + +++ FG A L
Sbjct: 114 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH---IQITDFGTAKVLSP--------- 161
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPF-VGSRDRL 232
+ +A +GT Y++PE++ ++ K D+W PF G+ +
Sbjct: 162 --ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLI 219
Query: 233 FQSITK 238
FQ I K
Sbjct: 220 FQKIIK 225
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 81/162 (50%), Gaps = 22/162 (13%)
Query: 50 ADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEA 109
A++KRE L+HP++V E + L +V EY G ++ FE R AG +SE
Sbjct: 60 ANVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL-FE--RICNAG-RFSED 115
Query: 110 VASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAP-VKLGGFGVAIQLQDGQLY 168
A + +Q++ + YCH + HRD+K LL + AP +K+ FG +
Sbjct: 116 EARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDG--SPAPRLKICDFGYS--------- 164
Query: 169 CSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKY-GKPVDIW 209
+ H K+ +GTP Y+APEV+ ++Y GK D+W
Sbjct: 165 ---KSSVLHSQPKS--TVGTPAYIAPEVLLKKEYDGKVADVW 201
Score = 28.5 bits (62), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 1 MLSVDPNKRITIHEVINHKWLKMKL 25
+ DP KRI+I E+ NH+W L
Sbjct: 257 IFVADPAKRISIPEIRNHEWFLKNL 281
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 74/186 (39%), Gaps = 19/186 (10%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE + L HP V+L T+ + LY Y C R F E
Sbjct: 81 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNG--CLLKYIRKIGSF--DETCTRF 136
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y +++ AL Y H IIHRD+KP +LL + +++ FG A L
Sbjct: 137 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH---IQITDFGTAKVLSP--------- 184
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPF-VGSRDRL 232
+ +A +GT Y++PE++ ++ K D+W PF G+ +
Sbjct: 185 --ESKQARANSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPFRAGNEYLI 242
Query: 233 FQSITK 238
FQ I K
Sbjct: 243 FQKIIK 248
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 85/190 (44%), Gaps = 26/190 (13%)
Query: 63 KHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEAL 122
+HP+++ L + Y +Y+V E M G ++ +I+R+ +SE AS + + + +
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQK----FFSEREASFVLHTIGKTV 134
Query: 123 RYCHENDIIHRDIKPHCVLLANKE-NSAPVKLGGFGVAIQL--QDGQLYCSGGERLDHYT 179
Y H ++HRD+KP +L ++ N +++ FG A QL ++G L
Sbjct: 135 EYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTP--------- 185
Query: 180 TKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVG----SRDRLFQS 235
T +++APEV++ Q Y + DIW PF + + +
Sbjct: 186 ------CYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTR 239
Query: 236 ITKGKLHILG 245
I GK + G
Sbjct: 240 IGSGKFTLSG 249
Score = 30.4 bits (67), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 1 MLSVDPNKRITIHEVINHKWLKMK 24
ML VDP++R+T +V+ H W+ K
Sbjct: 266 MLHVDPHQRLTAKQVLQHPWVTQK 289
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 85/190 (44%), Gaps = 26/190 (13%)
Query: 63 KHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEAL 122
+HP+++ L + Y +Y+V E M G ++ +I+R+ +SE AS + + + +
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQK----FFSEREASFVLHTIGKTV 134
Query: 123 RYCHENDIIHRDIKPHCVLLANKE-NSAPVKLGGFGVAIQL--QDGQLYCSGGERLDHYT 179
Y H ++HRD+KP +L ++ N +++ FG A QL ++G L
Sbjct: 135 EYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTP--------- 185
Query: 180 TKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVG----SRDRLFQS 235
T +++APEV++ Q Y + DIW PF + + +
Sbjct: 186 ------CYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTR 239
Query: 236 ITKGKLHILG 245
I GK + G
Sbjct: 240 IGSGKFTLSG 249
Score = 30.4 bits (67), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 17/24 (70%)
Query: 1 MLSVDPNKRITIHEVINHKWLKMK 24
ML VDP++R+T +V+ H W+ K
Sbjct: 266 MLHVDPHQRLTAKQVLQHPWVTQK 289
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 77/163 (47%), Gaps = 22/163 (13%)
Query: 49 EADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSE 108
+ +++RE L+HP++V E + L ++ EY G E+ R +SE
Sbjct: 60 DENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGG----ELYERICNAGRFSE 115
Query: 109 AVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAP-VKLGGFGVAIQLQDGQL 167
A + +Q+L + YCH I HRD+K LL + AP +K+ FG +
Sbjct: 116 DEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDG--SPAPRLKICDFGYS-------- 165
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKY-GKPVDIW 209
+ H K+ +GTP Y+APEV+ Q+Y GK D+W
Sbjct: 166 ----KSSVLHSQPKST--VGTPAYIAPEVLLRQEYDGKIADVW 202
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 78/186 (41%), Gaps = 19/186 (10%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE + L HP V+L T+ + LY Y ++ + +R+ + + E
Sbjct: 81 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL-LKYIRKIGS---FDETCTRF 136
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y +++ AL Y H IIHRD+KP +LL + +++ FG A L
Sbjct: 137 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH---IQITDFGTAKVLSP--------- 184
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPF-VGSRDRL 232
+ +A +GT Y++PE++ ++ K D+W PF G+ +
Sbjct: 185 --ESKQARANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPFRAGNEGLI 242
Query: 233 FQSITK 238
F I K
Sbjct: 243 FAKIIK 248
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 81/163 (49%), Gaps = 22/163 (13%)
Query: 49 EADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSE 108
+ ++KRE L+HP++V E + L +V EY G ++ FE R AG +SE
Sbjct: 59 DENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL-FE--RICNAG-RFSE 114
Query: 109 AVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAP-VKLGGFGVAIQLQDGQL 167
A + +Q++ + YCH + HRD+K LL + AP +K+ FG +
Sbjct: 115 DEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDG--SPAPRLKICAFGYS-------- 164
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKY-GKPVDIW 209
+ H K+ +GTP Y+APEV+ ++Y GK D+W
Sbjct: 165 ----KSSVLHSQPKS--TVGTPAYIAPEVLLKKEYDGKVADVW 201
Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 1 MLSVDPNKRITIHEVINHKWLKMKL 25
+ DP KRI+I E+ NH+W L
Sbjct: 257 IFVADPAKRISIPEIRNHEWFLKNL 281
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 55 EATICHMLKHPHVVEL------LETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSE 108
E I L HP+VV L+ + + + EY +G D+ R+ F
Sbjct: 63 EIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDL-----RKYLNQFENCC 117
Query: 109 AVASHYMRQVLE----ALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQD 164
+ +R +L ALRY HEN IIHRD+KP ++L K+ G A +L
Sbjct: 118 GLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQ 177
Query: 165 GQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
G+L C+ +GT Y+APE++E +KY VD W
Sbjct: 178 GEL-CT-------------EFVGTLQYLAPELLEQKKYTVTVDYW 208
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 78/186 (41%), Gaps = 19/186 (10%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE + L HP V+L T+ + LY Y ++ + +R+ + + E
Sbjct: 81 RERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL-LKYIRKIGS---FDETCTRF 136
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y +++ AL Y H IIHRD+KP +LL + +++ FG A L
Sbjct: 137 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH---IQITDFGTAKVLSP--------- 184
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPF-VGSRDRL 232
+ +A +GT Y++PE++ ++ K D+W PF G+ +
Sbjct: 185 --ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLI 242
Query: 233 FQSITK 238
F I K
Sbjct: 243 FAKIIK 248
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 55 EATICHMLKHPHVVEL------LETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSE 108
E I L HP+VV L+ + + + EY +G D+ R+ F
Sbjct: 62 EIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDL-----RKYLNQFENCC 116
Query: 109 AVASHYMRQVLE----ALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQD 164
+ +R +L ALRY HEN IIHRD+KP ++L K+ G A +L
Sbjct: 117 GLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQ 176
Query: 165 GQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
G+L C+ +GT Y+APE++E +KY VD W
Sbjct: 177 GEL-CT-------------EFVGTLQYLAPELLEQKKYTVTVDYW 207
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 78/163 (47%), Gaps = 22/163 (13%)
Query: 49 EADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSE 108
+ ++KRE L+HP++V E + L +V EY G E+ R +SE
Sbjct: 59 DENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGG----ELFERICNAGRFSE 114
Query: 109 AVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAP-VKLGGFGVAIQLQDGQL 167
A + +Q++ + YCH + HRD+K LL + AP +K+ FG + + L
Sbjct: 115 DEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDG--SPAPRLKICAFGYS---KSSVL 169
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKY-GKPVDIW 209
+ ++ +GTP Y+APEV+ ++Y GK D+W
Sbjct: 170 H-----------SQPKDTVGTPAYIAPEVLLKKEYDGKVADVW 201
Score = 28.5 bits (62), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 1 MLSVDPNKRITIHEVINHKWLKMKL 25
+ DP KRI+I E+ NH+W L
Sbjct: 257 IFVADPAKRISIPEIRNHEWFLKNL 281
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 80/157 (50%), Gaps = 21/157 (13%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE + L HP+++ LL+ + + + +VF++M+ E++ + + V + +
Sbjct: 61 REIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETD---LEVIIKDNS-LVLTPSHIKA 116
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
YM L+ L Y H++ I+HRD+KP+ +LL + + +KL FG+A S G
Sbjct: 117 YMLMTLQGLEYLHQHWILHRDLKPNNLLL---DENGVLKLADFGLA---------KSFGS 164
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
Y H++ T Y APE++ + YG VD+W
Sbjct: 165 PNRAYX----HQVVTRWYRAPELLFGARMYGVGVDMW 197
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 81/163 (49%), Gaps = 22/163 (13%)
Query: 49 EADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSE 108
+ ++KRE L+HP++V E + L +V EY G ++ FE R AG +SE
Sbjct: 58 DENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL-FE--RICNAG-RFSE 113
Query: 109 AVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAP-VKLGGFGVAIQLQDGQL 167
A + +Q++ + YCH + HRD+K LL + AP +K+ FG +
Sbjct: 114 DEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDG--SPAPRLKICDFGYS-------- 163
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKY-GKPVDIW 209
+ H K+ +GTP Y+APEV+ ++Y GK D+W
Sbjct: 164 ----KSSVLHSQPKS--TVGTPAYIAPEVLLKKEYDGKVADVW 200
Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 1 MLSVDPNKRITIHEVINHKWLKMKL 25
+ DP KRI+I E+ NH+W L
Sbjct: 256 IFVADPAKRISIPEIRNHEWFLKNL 280
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 78/186 (41%), Gaps = 19/186 (10%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE + L HP V+L + + LY Y ++ + +R+ + + E
Sbjct: 86 RERDVMSRLDHPFFVKLYFCFQDDEKLYFGLSYAKNGEL-LKYIRKIGS---FDETCTRF 141
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y +++ AL Y H IIHRD+KP +LL + +++ FG A L
Sbjct: 142 YTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH---IQITDFGTAKVLSP--------- 189
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPF-VGSRDRL 232
+ +A +GT Y++PE++ ++ K D+W PF G+ +
Sbjct: 190 --ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLI 247
Query: 233 FQSITK 238
FQ I K
Sbjct: 248 FQKIIK 253
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
++K+E I ML H +VV+ + Y+ EY G E+ R E
Sbjct: 50 NIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGG----ELFDRIEPDIGMPEPD 105
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCS 170
A + Q++ + Y H I HRDIKP +LL ++N +K+ FG+A + +
Sbjct: 106 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN---LKISDFGLATVFR-----YN 157
Query: 171 GGERLDHYTTKAGHRIGTPHYMAPEVIEDQKY-GKPVDIW 209
ERL GT Y+APE+++ +++ +PVD+W
Sbjct: 158 NRERL------LNKMXGTLPYVAPELLKRREFHAEPVDVW 191
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
++K+E I ML H +VV+ + Y+ EY G E+ R E
Sbjct: 51 NIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGG----ELFDRIEPDIGMPEPD 106
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCS 170
A + Q++ + Y H I HRDIKP +LL ++N +K+ FG+A + +
Sbjct: 107 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN---LKISDFGLATVFR-----YN 158
Query: 171 GGERLDHYTTKAGHRIGTPHYMAPEVIEDQKY-GKPVDIW 209
ERL GT Y+APE+++ +++ +PVD+W
Sbjct: 159 NRERL------LNKMXGTLPYVAPELLKRREFHAEPVDVW 192
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 75/156 (48%), Gaps = 22/156 (14%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E +I L H HVV + +++V E + E+ +R A +E A +Y
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSL-LELHKRRKA---LTEPEARYY 122
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQ-DGQLYCSGGE 173
+RQ++ +Y H N +IHRD+K + L VK+G FG+A +++ DG+
Sbjct: 123 LRQIVLGCQYLHRNRVIHRDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGE------- 172
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+ GTP+Y+APEV+ + + VD+W
Sbjct: 173 -------RKKTLCGTPNYIAPEVLSKKGHSFEVDVW 201
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
++K+E I ML H +VV+ + Y+ EY G E+ R E
Sbjct: 50 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGG----ELFDRIEPDIGMPEPD 105
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCS 170
A + Q++ + Y H I HRDIKP +LL ++N +K+ FG+A + +
Sbjct: 106 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN---LKISDFGLATVFR-----YN 157
Query: 171 GGERLDHYTTKAGHRIGTPHYMAPEVIEDQKY-GKPVDIW 209
ERL GT Y+APE+++ +++ +PVD+W
Sbjct: 158 NRERL------LNKMXGTLPYVAPELLKRREFHAEPVDVW 191
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 75/156 (48%), Gaps = 22/156 (14%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E +I L H HVV + +++V E + E+ +R A +E A +Y
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSL-LELHKRRKA---LTEPEARYY 122
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQ-DGQLYCSGGE 173
+RQ++ +Y H N +IHRD+K + L VK+G FG+A +++ DG+
Sbjct: 123 LRQIVLGCQYLHRNRVIHRDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGE------- 172
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+ GTP+Y+APEV+ + + VD+W
Sbjct: 173 -------RKKTLCGTPNYIAPEVLSKKGHSFEVDVW 201
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 75/156 (48%), Gaps = 22/156 (14%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E +I L H HVV + +++V E + E+ +R A +E A +Y
Sbjct: 71 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSL-LELHKRRKA---LTEPEARYY 126
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQ-DGQLYCSGGE 173
+RQ++ +Y H N +IHRD+K + L VK+G FG+A +++ DG+
Sbjct: 127 LRQIVLGCQYLHRNRVIHRDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGE------- 176
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+ GTP+Y+APEV+ + + VD+W
Sbjct: 177 -------RKKTLCGTPNYIAPEVLSKKGHSFEVDVW 205
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
++K+E I ML H +VV+ + Y+ EY G E+ R E
Sbjct: 50 NIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGG----ELFDRIEPDIGMPEPD 105
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCS 170
A + Q++ + Y H I HRDIKP +LL ++N +K+ FG+A + +
Sbjct: 106 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN---LKISDFGLATVFR-----YN 157
Query: 171 GGERLDHYTTKAGHRIGTPHYMAPEVIEDQKY-GKPVDIW 209
ERL GT Y+APE+++ +++ +PVD+W
Sbjct: 158 NRERL------LNKMCGTLPYVAPELLKRREFHAEPVDVW 191
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 88/205 (42%), Gaps = 28/205 (13%)
Query: 49 EADLKREATICHMLKHPHVVELLETYSSE--GMLYMVFEYMDGSDIC-FEIVRRATAGFV 105
EA++K+E + L+H +V++L++ +E +YMV EY +C + + +
Sbjct: 50 EANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYC----VCGMQEMLDSVPEKR 105
Query: 106 YSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDG 165
+ A Y Q+++ L Y H I+H+DIKP +LL +K+ GVA
Sbjct: 106 FPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLT---TGGTLKISALGVA------ 156
Query: 166 QLYCSGGERLDHYTTKAGHRI--GTPHYMAPEVIE--DQKYGKPVDIWXXXXXXXXXXXX 221
E L + R G+P + PE+ D G VDIW
Sbjct: 157 -------EALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTG 209
Query: 222 XXPFVGSRD-RLFQSITKGKLHILG 245
PF G +LF++I KG I G
Sbjct: 210 LYPFEGDNIYKLFENIGKGSYAIPG 234
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
++K+E I ML H +VV+ + Y+ EY G E+ R E
Sbjct: 50 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGG----ELFDRIEPDIGMPEPD 105
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCS 170
A + Q++ + Y H I HRDIKP +LL ++N +K+ FG+A + +
Sbjct: 106 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN---LKISDFGLATVFR-----YN 157
Query: 171 GGERLDHYTTKAGHRIGTPHYMAPEVIEDQKY-GKPVDIW 209
ERL GT Y+APE+++ +++ +PVD+W
Sbjct: 158 NRERL------LNKMXGTLPYVAPELLKRREFHAEPVDVW 191
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 73/160 (45%), Gaps = 19/160 (11%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
++K+E I ML H +VV+ + Y+ EY G E+ R E
Sbjct: 51 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGG----ELFDRIEPDIGMPEPD 106
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCS 170
A + Q++ + Y H I HRDIKP +LL ++N +K+ FG+A
Sbjct: 107 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN---LKISDFGLATVF-------- 155
Query: 171 GGERLDHYTTKAGHRIGTPHYMAPEVIEDQKY-GKPVDIW 209
R ++ GT Y+APE+++ +++ +PVD+W
Sbjct: 156 ---RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 192
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
++K+E I ML H +VV+ + Y+ EY G E+ R E
Sbjct: 50 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGG----ELFDRIEPDIGMPEPD 105
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCS 170
A + Q++ + Y H I HRDIKP +LL ++N +K+ FG+A + +
Sbjct: 106 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN---LKISDFGLATVFR-----YN 157
Query: 171 GGERLDHYTTKAGHRIGTPHYMAPEVIEDQKY-GKPVDIW 209
ERL GT Y+APE+++ +++ +PVD+W
Sbjct: 158 NRERL------LNKMXGTLPYVAPELLKRREFHAEPVDVW 191
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
++K+E I ML H +VV+ + Y+ EY G E+ R E
Sbjct: 50 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGG----ELFDRIEPDIGMPEPD 105
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCS 170
A + Q++ + Y H I HRDIKP +LL ++N +K+ FG+A + +
Sbjct: 106 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN---LKISDFGLATVFR-----YN 157
Query: 171 GGERLDHYTTKAGHRIGTPHYMAPEVIEDQKY-GKPVDIW 209
ERL GT Y+APE+++ +++ +PVD+W
Sbjct: 158 NRERL------LNKMCGTLPYVAPELLKRREFHAEPVDVW 191
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 80/163 (49%), Gaps = 22/163 (13%)
Query: 49 EADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSE 108
+ ++KRE L+HP++V E + L +V EY G ++ FE R AG +SE
Sbjct: 59 DENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGEL-FE--RICNAG-RFSE 114
Query: 109 AVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAP-VKLGGFGVAIQLQDGQL 167
A + +Q++ + Y H + HRD+K LL + AP +K+ FG
Sbjct: 115 DEARFFFQQLISGVSYAHAMQVAHRDLKLENTLLDG--SPAPRLKIADFG---------- 162
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKY-GKPVDIW 209
Y + H K+ +GTP Y+APEV+ ++Y GK D+W
Sbjct: 163 YSKAS--VLHSQPKSA--VGTPAYIAPEVLLKKEYDGKVADVW 201
Score = 28.9 bits (63), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 1 MLSVDPNKRITIHEVINHKWLKMKL 25
+ DP KRI+I E+ NH+W L
Sbjct: 257 IFVADPAKRISIPEIRNHEWFLKNL 281
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 73/160 (45%), Gaps = 19/160 (11%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
++K+E I ML H +VV+ + Y+ EY G E+ R E
Sbjct: 50 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGG----ELFDRIEPDIGMPEPD 105
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCS 170
A + Q++ + Y H I HRDIKP +LL ++N +K+ FG+A
Sbjct: 106 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN---LKISDFGLATVF-------- 154
Query: 171 GGERLDHYTTKAGHRIGTPHYMAPEVIEDQKY-GKPVDIW 209
R ++ GT Y+APE+++ +++ +PVD+W
Sbjct: 155 ---RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVW 191
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
++K+E I ML H +VV+ + Y+ EY G E+ R E
Sbjct: 50 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGG----ELFDRIEPDIGMPEPD 105
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCS 170
A + Q++ + Y H I HRDIKP +LL ++N +K+ FG+A + +
Sbjct: 106 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN---LKISDFGLATVFR-----YN 157
Query: 171 GGERLDHYTTKAGHRIGTPHYMAPEVIEDQKY-GKPVDIW 209
ERL GT Y+APE+++ +++ +PVD+W
Sbjct: 158 NRERL------LNKMCGTLPYVAPELLKRREFHAEPVDVW 191
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
++K+E I ML H +VV+ + Y+ EY G E+ R E
Sbjct: 49 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGG----ELFDRIEPDIGMPEPD 104
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCS 170
A + Q++ + Y H I HRDIKP +LL ++N +K+ FG+A + +
Sbjct: 105 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN---LKISDFGLATVFR-----YN 156
Query: 171 GGERLDHYTTKAGHRIGTPHYMAPEVIEDQKY-GKPVDIW 209
ERL GT Y+APE+++ +++ +PVD+W
Sbjct: 157 NRERL------LNKMCGTLPYVAPELLKRREFHAEPVDVW 190
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
++K+E I ML H +VV+ + Y+ EY G E+ R E
Sbjct: 50 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGG----ELFDRIEPDIGMPEPD 105
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCS 170
A + Q++ + Y H I HRDIKP +LL ++N +K+ FG+A + +
Sbjct: 106 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN---LKISDFGLATVFR-----YN 157
Query: 171 GGERLDHYTTKAGHRIGTPHYMAPEVIEDQKY-GKPVDIW 209
ERL GT Y+APE+++ +++ +PVD+W
Sbjct: 158 NRERL------LNKMCGTLPYVAPELLKRREFHAEPVDVW 191
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
++K+E I ML H +VV+ + Y+ EY G E+ R E
Sbjct: 50 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGG----ELFDRIEPDIGMPEPD 105
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCS 170
A + Q++ + Y H I HRDIKP +LL ++N +K+ FG+A + +
Sbjct: 106 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN---LKISDFGLATVFR-----YN 157
Query: 171 GGERLDHYTTKAGHRIGTPHYMAPEVIEDQKY-GKPVDIW 209
ERL GT Y+APE+++ +++ +PVD+W
Sbjct: 158 NRERL------LNKMCGTLPYVAPELLKRREFHAEPVDVW 191
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
++K+E I ML H +VV+ + Y+ EY G E+ R E
Sbjct: 51 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGG----ELFDRIEPDIGMPEPD 106
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCS 170
A + Q++ + Y H I HRDIKP +LL ++N +K+ FG+A + +
Sbjct: 107 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN---LKISDFGLATVFR-----YN 158
Query: 171 GGERLDHYTTKAGHRIGTPHYMAPEVIEDQKY-GKPVDIW 209
ERL GT Y+APE+++ +++ +PVD+W
Sbjct: 159 NRERL------LNKMCGTLPYVAPELLKRREFHAEPVDVW 192
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
++K+E I ML H +VV+ + Y+ EY G E+ R E
Sbjct: 50 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGG----ELFDRIEPDIGMPEPD 105
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCS 170
A + Q++ + Y H I HRDIKP +LL ++N +K+ FG+A + +
Sbjct: 106 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN---LKISDFGLATVFR-----YN 157
Query: 171 GGERLDHYTTKAGHRIGTPHYMAPEVIEDQKY-GKPVDIW 209
ERL GT Y+APE+++ +++ +PVD+W
Sbjct: 158 NRERL------LNKMCGTLPYVAPELLKRREFHAEPVDVW 191
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
++K+E I ML H +VV+ + Y+ EY G E+ R E
Sbjct: 51 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGG----ELFDRIEPDIGMPEPD 106
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCS 170
A + Q++ + Y H I HRDIKP +LL ++N +K+ FG+A + +
Sbjct: 107 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN---LKISDFGLATVFR-----YN 158
Query: 171 GGERLDHYTTKAGHRIGTPHYMAPEVIEDQKY-GKPVDIW 209
ERL GT Y+APE+++ +++ +PVD+W
Sbjct: 159 NRERL------LNKMCGTLPYVAPELLKRREFHAEPVDVW 192
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
++K+E I ML H +VV+ + Y+ EY G E+ R E
Sbjct: 50 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGG----ELFDRIEPDIGMPEPD 105
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCS 170
A + Q++ + Y H I HRDIKP +LL ++N +K+ FG+A + +
Sbjct: 106 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN---LKISDFGLATVFR-----YN 157
Query: 171 GGERLDHYTTKAGHRIGTPHYMAPEVIEDQKY-GKPVDIW 209
ERL GT Y+APE+++ +++ +PVD+W
Sbjct: 158 NRERL------LNKMCGTLPYVAPELLKRREFHAEPVDVW 191
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 78/176 (44%), Gaps = 19/176 (10%)
Query: 52 LKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVA 111
+RE L H ++V +++ + Y+V EY++G + I S A
Sbjct: 58 FEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGP----LSVDTA 113
Query: 112 SHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSG 171
++ Q+L+ +++ H+ I+HRDIKP +L+ +++ +K+ FG+A L + L
Sbjct: 114 INFTNQILDGIKHAHDMRIVHRDIKPQNILI---DSNKTLKIFDFGIAKALSETSL---- 166
Query: 172 GERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVG 227
T+ H +GT Y +PE + + + DI+ PF G
Sbjct: 167 --------TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNG 214
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 75/156 (48%), Gaps = 22/156 (14%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E +I L H HVV + +++V E + E+ +R A +E A +Y
Sbjct: 65 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSL-LELHKRRKA---LTEPEARYY 120
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQ-DGQLYCSGGE 173
+RQ++ +Y H N +IHRD+K + L VK+G FG+A +++ DG+
Sbjct: 121 LRQIVLGCQYLHRNRVIHRDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGE------- 170
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+ GTP+Y+APEV+ + + VD+W
Sbjct: 171 -------RKKVLCGTPNYIAPEVLSKKGHSFEVDVW 199
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
++K+E I ML H +VV+ + Y+ EY G E+ R E
Sbjct: 51 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGG----ELFDRIEPDIGMPEPD 106
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCS 170
A + Q++ + Y H I HRDIKP +LL ++N +K+ FG+A + +
Sbjct: 107 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN---LKISDFGLATVFR-----YN 158
Query: 171 GGERLDHYTTKAGHRIGTPHYMAPEVIEDQKY-GKPVDIW 209
ERL GT Y+APE+++ +++ +PVD+W
Sbjct: 159 NRERL------LNKMCGTLPYVAPELLKRREFHAEPVDVW 192
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
++K+E I ML H +VV+ + Y+ EY G E+ R E
Sbjct: 51 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGG----ELFDRIEPDIGMPEPD 106
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCS 170
A + Q++ + Y H I HRDIKP +LL ++N +K+ FG+A + +
Sbjct: 107 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN---LKISDFGLATVFR-----YN 158
Query: 171 GGERLDHYTTKAGHRIGTPHYMAPEVIEDQKY-GKPVDIW 209
ERL GT Y+APE+++ +++ +PVD+W
Sbjct: 159 NRERL------LNKMCGTLPYVAPELLKRREFHAEPVDVW 192
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
++K+E I ML H +VV+ + Y+ EY G E+ R E
Sbjct: 51 NIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGG----ELFDRIEPDIGMPEPD 106
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCS 170
A + Q++ + Y H I HRDIKP +LL ++N +K+ FG+A + +
Sbjct: 107 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN---LKISDFGLATVFR-----YN 158
Query: 171 GGERLDHYTTKAGHRIGTPHYMAPEVIEDQKY-GKPVDIW 209
ERL GT Y+APE+++ +++ +PVD+W
Sbjct: 159 NRERL------LNKMCGTLPYVAPELLKRREFHAEPVDVW 192
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 75/156 (48%), Gaps = 22/156 (14%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E +I L H HVV + +++V E + E+ +R A +E A +Y
Sbjct: 89 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSL-LELHKRRKA---LTEPEARYY 144
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQ-DGQLYCSGGE 173
+RQ++ +Y H N +IHRD+K + L VK+G FG+A +++ DG+
Sbjct: 145 LRQIVLGCQYLHRNRVIHRDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGE------- 194
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+ GTP+Y+APEV+ + + VD+W
Sbjct: 195 -------RKKVLCGTPNYIAPEVLSKKGHSFEVDVW 223
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 75/156 (48%), Gaps = 22/156 (14%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E +I L H HVV + +++V E + E+ +R A +E A +Y
Sbjct: 91 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSL-LELHKRRKA---LTEPEARYY 146
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQ-DGQLYCSGGE 173
+RQ++ +Y H N +IHRD+K + L VK+G FG+A +++ DG+
Sbjct: 147 LRQIVLGCQYLHRNRVIHRDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGE------- 196
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+ GTP+Y+APEV+ + + VD+W
Sbjct: 197 -------RKKVLCGTPNYIAPEVLSKKGHSFEVDVW 225
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
++K+E I ML H +VV+ + Y+ EY G E+ R E
Sbjct: 51 NIKKEICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGG----ELFDRIEPDIGMPEPD 106
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCS 170
A + Q++ + Y H I HRDIKP +LL ++N +K+ FG+A + +
Sbjct: 107 AQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN---LKISDFGLATVFR-----YN 158
Query: 171 GGERLDHYTTKAGHRIGTPHYMAPEVIEDQKY-GKPVDIW 209
ERL GT Y+APE+++ +++ +PVD+W
Sbjct: 159 NRERL------LNKMCGTLPYVAPELLKRREFHAEPVDVW 192
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 76/182 (41%), Gaps = 31/182 (17%)
Query: 80 LYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHC 139
Y+VFE M G I I +R ++E AS ++ V AL + H I HRD+KP
Sbjct: 86 FYLVFEKMRGGSILSHIHKRRH----FNELEASVVVQDVASALDFLHNKGIAHRDLKPEN 141
Query: 140 VLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVI-- 197
+L + +PVK+ FG+ ++ G+ T + G+ YMAPEV+
Sbjct: 142 ILCEHPNQVSPVKICDFGLGSGIK------LNGDCSPISTPELLTPCGSAEYMAPEVVEA 195
Query: 198 ---EDQKYGKPVDIWXXXXXXXXXXXXXXPFVG----------------SRDRLFQSITK 238
E Y K D+W PFVG ++ LF+SI +
Sbjct: 196 FSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQE 255
Query: 239 GK 240
GK
Sbjct: 256 GK 257
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 71/162 (43%), Gaps = 27/162 (16%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
D+ +E L+HP+ ++ Y E ++V EY GS V + V AV
Sbjct: 61 DIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAV 120
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCS 170
L+ L Y H +++IHRD+K +LL+ VKLG FG A
Sbjct: 121 T----HGALQGLAYLHSHNMIHRDVKAGNILLS---EPGLVKLGDFGSA----------- 162
Query: 171 GGERLDHYTTKAGHRIGTPHYMAPEVI---EDQKYGKPVDIW 209
A +GTP++MAPEVI ++ +Y VD+W
Sbjct: 163 ------SIMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVW 198
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 64/138 (46%), Gaps = 23/138 (16%)
Query: 77 EGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIK 136
+ L++V E+ + I + T G E ++ R++L L + H++ +IHRDIK
Sbjct: 99 DDQLWLVMEFCGAGSVTDLI--KNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIK 156
Query: 137 PHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEV 196
VLL +A VKL FGV+ Q LD + IGTP++MAPEV
Sbjct: 157 GQNVLLT---ENAEVKLVDFGVSAQ-------------LDRTVGRRNTFIGTPYWMAPEV 200
Query: 197 IE-----DQKYGKPVDIW 209
I D Y D+W
Sbjct: 201 IACDENPDATYDFKSDLW 218
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 71/162 (43%), Gaps = 27/162 (16%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
D+ +E L+HP+ ++ Y E ++V EY GS V + V AV
Sbjct: 100 DIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAV 159
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCS 170
L+ L Y H +++IHRD+K +LL+ VKLG FG A
Sbjct: 160 T----HGALQGLAYLHSHNMIHRDVKAGNILLS---EPGLVKLGDFGSA----------- 201
Query: 171 GGERLDHYTTKAGHRIGTPHYMAPEVI---EDQKYGKPVDIW 209
A +GTP++MAPEVI ++ +Y VD+W
Sbjct: 202 ------SIMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVW 237
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 60/115 (52%), Gaps = 11/115 (9%)
Query: 49 EADLKREATICHMLKHPHVVELLETY----SSEGMLYMVFEYMDGSDICFEIVRRATAGF 104
E +L A+ C PH+V +++ Y + L +V E +DG ++ I R F
Sbjct: 60 EVELHWRASQC-----PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAF 114
Query: 105 VYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVA 159
+E AS M+ + EA++Y H +I HRD+KP +L +K +A +KL FG A
Sbjct: 115 --TEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 167
Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 7/35 (20%)
Query: 1 MLSVDPNKRITIHEVINHKWL-------KMKLHTS 28
+L +P +R+TI E +NH W+ + LHTS
Sbjct: 240 LLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 274
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 84/197 (42%), Gaps = 30/197 (15%)
Query: 39 PDERLNHYTTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVR 98
PDE ++ T ++++EA + MLKHP+++ L E L +V E+ G +
Sbjct: 42 PDEDISQ--TIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPL-----N 94
Query: 99 RATAGFVYSEAVASHYMRQVLEALRYCHEN---DIIHRDIKPHCVLLANK-EN----SAP 150
R +G + ++ Q+ + Y H+ IIHRD+K +L+ K EN +
Sbjct: 95 RVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKI 154
Query: 151 VKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWX 210
+K+ FG+A R H TTK G +MAPEVI + K D+W
Sbjct: 155 LKITDFGLA--------------REWHRTTKMSAA-GAYAWMAPEVIRASMFSKGSDVWS 199
Query: 211 XXXXXXXXXXXXXPFVG 227
PF G
Sbjct: 200 YGVLLWELLTGEVPFRG 216
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 76/164 (46%), Gaps = 28/164 (17%)
Query: 54 REATICHMLK---HPHVVELLETYSS-----EGMLYMVFEYMDGSDICFEIVRRATAGFV 105
RE + L+ HP+VV L++ ++ E + +VFE++D + + +A +
Sbjct: 52 REVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTY--LDKAPPPGL 109
Query: 106 YSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDG 165
+E + MRQ L L + H N I+HRD+KP +L+ + VKL FG+A
Sbjct: 110 PAETI-KDLMRQFLRGLDFLHANCIVHRDLKPENILVT---SGGTVKLADFGLA------ 159
Query: 166 QLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
R+ Y + T Y APEV+ Y PVD+W
Sbjct: 160 --------RIYSYQMALAPVVVTLWYRAPEVLLQSTYATPVDMW 195
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 71/157 (45%), Gaps = 23/157 (14%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE + H P++V + S+G + + E+MDG + ++++ A E +
Sbjct: 63 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLD-QVLKEAKR---IPEEILGK 118
Query: 114 YMRQVLEALRYCHEN-DIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGG 172
VL L Y E I+HRD+KP +L+ ++ +KL FGV+ QL D
Sbjct: 119 VSIAVLRGLAYLREKHQIMHRDVKPSNILVNSR---GEIKLCDFGVSGQLID-------- 167
Query: 173 ERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+ A +GT YMAPE ++ Y DIW
Sbjct: 168 -------SMANSFVGTRSYMAPERLQGTHYSVQSDIW 197
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 23/157 (14%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE + H P++V + S+G + + E+MDG + +++++A E +
Sbjct: 72 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLD-QVLKKAGR---IPEQILGK 127
Query: 114 YMRQVLEALRYCHEN-DIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGG 172
V++ L Y E I+HRD+KP +L+ ++ +KL FGV+ QL D
Sbjct: 128 VSIAVIKGLTYLREKHKIMHRDVKPSNILVNSR---GEIKLCDFGVSGQLID-------- 176
Query: 173 ERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+ A +GT YM+PE ++ Y DIW
Sbjct: 177 -------SMANSFVGTRSYMSPERLQGTHYSVQSDIW 206
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 76/184 (41%), Gaps = 35/184 (19%)
Query: 80 LYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHC 139
Y+VFE M G I I +R ++E AS ++ V AL + H I HRD+KP
Sbjct: 86 FYLVFEKMRGGSILSHIHKRRH----FNELEASVVVQDVASALDFLHNKGIAHRDLKPEN 141
Query: 140 VLLANKENSAPVKLGGF--GVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVI 197
+L + +PVK+ F G I+L G+ T + G+ YMAPEV+
Sbjct: 142 ILCEHPNQVSPVKICDFDLGSGIKLN--------GDCSPISTPELLTPCGSAEYMAPEVV 193
Query: 198 -----EDQKYGKPVDIWXXXXXXXXXXXXXXPFVG----------------SRDRLFQSI 236
E Y K D+W PFVG ++ LF+SI
Sbjct: 194 EAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESI 253
Query: 237 TKGK 240
+GK
Sbjct: 254 QEGK 257
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 25/160 (15%)
Query: 52 LKREATICHMLKHPHVVELLETYSSEG----MLYMVFEYMDGSDICFEIVRRATAGFVYS 107
+REA L HP +V + +T +E + Y+V EY+DG + +
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDG--VTLRDIVHTEGPMTPK 116
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQL 167
A+ + +AL + H+N IIHRD+KP ++++ VK+ FG+A + D
Sbjct: 117 RAI--EVIADACQALNFSHQNGIIHRDVKPANIMISATNA---VKVMDFGIARAIAD--- 168
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVD 207
SG + T+ IGT Y++PE Q G VD
Sbjct: 169 --SG-----NSVTQTAAVIGTAQYLSPE----QARGDSVD 197
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 25/160 (15%)
Query: 52 LKREATICHMLKHPHVVELLETYSSEG----MLYMVFEYMDGSDICFEIVRRATAGFVYS 107
+REA L HP +V + +T +E + Y+V EY+DG + +
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDG--VTLRDIVHTEGPMTPK 116
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQL 167
A+ + +AL + H+N IIHRD+KP ++++ VK+ FG+A + D
Sbjct: 117 RAI--EVIADACQALNFSHQNGIIHRDVKPANIMISATNA---VKVMDFGIARAIAD--- 168
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVD 207
SG + T+ IGT Y++PE Q G VD
Sbjct: 169 --SG-----NSVTQTAAVIGTAQYLSPE----QARGDSVD 197
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 76/164 (46%), Gaps = 28/164 (17%)
Query: 54 REATICHMLK---HPHVVELLETYSS-----EGMLYMVFEYMDGSDICFEIVRRATAGFV 105
RE + L+ HP+VV L++ ++ E + +VFE++D + + +A +
Sbjct: 52 REVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTY--LDKAPPPGL 109
Query: 106 YSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDG 165
+E + MRQ L L + H N I+HRD+KP +L+ + VKL FG+A
Sbjct: 110 PAETI-KDLMRQFLRGLDFLHANCIVHRDLKPENILVT---SGGTVKLADFGLA------ 159
Query: 166 QLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
R+ Y + T Y APEV+ Y PVD+W
Sbjct: 160 --------RIYSYQMALDPVVVTLWYRAPEVLLQSTYATPVDMW 195
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 77/165 (46%), Gaps = 25/165 (15%)
Query: 54 REATICHMLKHPHVVELLETYSSE--------GMLYMVFEYMDGSDICFEIVRRATAGFV 105
RE I +LKH +VV L+E ++ G +Y+VF++ + D+ ++ F
Sbjct: 66 REIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCE-HDLA-GLLSNVLVKFT 123
Query: 106 YSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDG 165
SE M+ +L L Y H N I+HRD+K VL+ +KL FG+A
Sbjct: 124 LSEI--KRVMQMLLNGLYYIHRNKILHRDMKAANVLIT---RDGVLKLADFGLARAFSLA 178
Query: 166 QLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
+ + + +R+ T Y PE++ ++ YG P+D+W
Sbjct: 179 K---------NSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLW 214
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 25/160 (15%)
Query: 52 LKREATICHMLKHPHVVELLETYSSEG----MLYMVFEYMDGSDICFEIVRRATAGFVYS 107
+REA L HP +V + +T +E + Y+V EY+DG + +
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDG--VTLRDIVHTEGPMTPK 116
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQL 167
A+ + +AL + H+N IIHRD+KP ++++ VK+ FG+A + D
Sbjct: 117 RAI--EVIADACQALNFSHQNGIIHRDVKPANIMISATNA---VKVMDFGIARAIAD--- 168
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVD 207
SG + T+ IGT Y++PE Q G VD
Sbjct: 169 --SG-----NSVTQTAAVIGTAQYLSPE----QARGDSVD 197
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 82/186 (44%), Gaps = 27/186 (14%)
Query: 52 LKREATICHM--LKHPHVVELLETYS-----SEGMLYMVFEYMDGSDICFEIVRRATAGF 104
++ A + H+ +HP+VV L + + E L +VFE++D D+ + + G
Sbjct: 59 IREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPG- 116
Query: 105 VYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQD 164
V +E + M Q+L L + H + ++HRD+KP +L+ +S +KL FG+A
Sbjct: 117 VPTETIKD-MMFQLLRGLDFLHSHRVVHRDLKPQNILVT---SSGQIKLADFGLA----- 167
Query: 165 GQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXP 224
R+ + + T Y APEV+ Y PVD+W
Sbjct: 168 ---------RIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPL 218
Query: 225 FVGSRD 230
F GS D
Sbjct: 219 FRGSSD 224
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 76/164 (46%), Gaps = 28/164 (17%)
Query: 54 REATICHMLK---HPHVVELLETYSS-----EGMLYMVFEYMDGSDICFEIVRRATAGFV 105
RE + L+ HP+VV L++ ++ E + +VFE++D + + +A +
Sbjct: 60 REVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTY--LDKAPPPGL 117
Query: 106 YSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDG 165
+E + MRQ L L + H N I+HRD+KP +L+ + VKL FG+A
Sbjct: 118 PAETI-KDLMRQFLRGLDFLHANCIVHRDLKPENILVT---SGGTVKLADFGLA------ 167
Query: 166 QLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
R+ Y + T Y APEV+ Y PVD+W
Sbjct: 168 --------RIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMW 203
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 23/157 (14%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE + H P++V + S+G + + E+MDG + +++++A E +
Sbjct: 80 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLD-QVLKKAGR---IPEQILGK 135
Query: 114 YMRQVLEALRYCHEN-DIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGG 172
V++ L Y E I+HRD+KP +L+ ++ +KL FGV+ QL D
Sbjct: 136 VSIAVIKGLTYLREKHKIMHRDVKPSNILVNSR---GEIKLCDFGVSGQLID-------- 184
Query: 173 ERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+ A +GT YM+PE ++ Y DIW
Sbjct: 185 -------SMANSFVGTRSYMSPERLQGTHYSVQSDIW 214
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 25/165 (15%)
Query: 54 REATICHMLKHPHVVELLE---TYSS-----EGMLYMVFEYMDGSDICFEIVRRATAGFV 105
RE I +LKH +VV L+E T +S +G +Y+VF++ + D+ ++ F
Sbjct: 66 REIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCE-HDLA-GLLSNVLVKFT 123
Query: 106 YSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDG 165
SE M+ +L L Y H N I+HRD+K VL+ +KL FG+A
Sbjct: 124 LSEI--KRVMQMLLNGLYYIHRNKILHRDMKAANVLIT---RDGVLKLADFGLARAFSLA 178
Query: 166 QLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
+ + + +R+ T Y PE++ ++ YG P+D+W
Sbjct: 179 K---------NSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLW 214
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 77/165 (46%), Gaps = 25/165 (15%)
Query: 54 REATICHMLKHPHVVELLETYSSE--------GMLYMVFEYMDGSDICFEIVRRATAGFV 105
RE I +LKH +VV L+E ++ G +Y+VF++ + D+ ++ F
Sbjct: 65 REIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCE-HDLA-GLLSNVLVKFT 122
Query: 106 YSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDG 165
SE M+ +L L Y H N I+HRD+K VL+ +KL FG+A
Sbjct: 123 LSEI--KRVMQMLLNGLYYIHRNKILHRDMKAANVLIT---RDGVLKLADFGLARAFSLA 177
Query: 166 QLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
+ + + +R+ T Y PE++ ++ YG P+D+W
Sbjct: 178 K---------NSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLW 213
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 76/172 (44%), Gaps = 21/172 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E I ++H +++++L+ + ++G +V E F + R E +AS+
Sbjct: 79 EIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPR---LDEPLASYI 135
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
RQ++ A+ Y DIIHRDIK +++A +KL FG A L+ G+L+
Sbjct: 136 FRQLVSAVGYLRLKDIIHRDIKDENIVIA---EDFTIKLIDFGSAAYLERGKLF------ 186
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIEDQKYGKP-VDIWXXXXXXXXXXXXXXPF 225
YT GT Y APEV+ Y P +++W PF
Sbjct: 187 ---YTF-----CGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF 230
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 23/157 (14%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE + H P++V + S+G + + E+MDG + +++++A E +
Sbjct: 53 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLD-QVLKKAGR---IPEQILGK 108
Query: 114 YMRQVLEALRYCHEN-DIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGG 172
V++ L Y E I+HRD+KP +L+ ++ +KL FGV+ QL D
Sbjct: 109 VSIAVIKGLTYLREKHKIMHRDVKPSNILVNSR---GEIKLCDFGVSGQLID-------- 157
Query: 173 ERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+ A +GT YM+PE ++ Y DIW
Sbjct: 158 -------SMANSFVGTRSYMSPERLQGTHYSVQSDIW 187
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 23/157 (14%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE + H P++V + S+G + + E+MDG + +++++A E +
Sbjct: 53 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLD-QVLKKAGR---IPEQILGK 108
Query: 114 YMRQVLEALRYCHEN-DIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGG 172
V++ L Y E I+HRD+KP +L+ ++ +KL FGV+ QL D
Sbjct: 109 VSIAVIKGLTYLREKHKIMHRDVKPSNILVNSR---GEIKLCDFGVSGQLID-------- 157
Query: 173 ERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+ A +GT YM+PE ++ Y DIW
Sbjct: 158 -------SMANSFVGTRSYMSPERLQGTHYSVQSDIW 187
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 83/188 (44%), Gaps = 27/188 (14%)
Query: 50 ADLKREATICHM--LKHPHVVELLETYS-----SEGMLYMVFEYMDGSDICFEIVRRATA 102
+ ++ A + H+ +HP+VV L + + E L +VFE++D D+ + +
Sbjct: 57 STIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEP 115
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
G V +E + M Q+L L + H + ++HRD+KP +L+ +S +KL FG+A
Sbjct: 116 G-VPTETI-KDMMFQLLRGLDFLHSHRVVHRDLKPQNILVT---SSGQIKLADFGLA--- 167
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXX 222
R+ + + T Y APEV+ Y PVD+W
Sbjct: 168 -----------RIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRK 216
Query: 223 XPFVGSRD 230
F GS D
Sbjct: 217 PLFRGSSD 224
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 82/186 (44%), Gaps = 27/186 (14%)
Query: 52 LKREATICHM--LKHPHVVELLETYS-----SEGMLYMVFEYMDGSDICFEIVRRATAGF 104
++ A + H+ +HP+VV L + + E L +VFE++D D+ + + G
Sbjct: 59 IREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPG- 116
Query: 105 VYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQD 164
V +E + M Q+L L + H + ++HRD+KP +L+ +S +KL FG+A
Sbjct: 117 VPTETI-KDMMFQLLRGLDFLHSHRVVHRDLKPQNILVT---SSGQIKLADFGLA----- 167
Query: 165 GQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXP 224
R+ + + T Y APEV+ Y PVD+W
Sbjct: 168 ---------RIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPL 218
Query: 225 FVGSRD 230
F GS D
Sbjct: 219 FRGSSD 224
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 23/157 (14%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE + H P++V + S+G + + E+MDG + +++++A E +
Sbjct: 53 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLD-QVLKKAGR---IPEQILGK 108
Query: 114 YMRQVLEALRYCHEN-DIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGG 172
V++ L Y E I+HRD+KP +L+ ++ +KL FGV+ QL D
Sbjct: 109 VSIAVIKGLTYLREKHKIMHRDVKPSNILVNSR---GEIKLCDFGVSGQLID-------- 157
Query: 173 ERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+ A +GT YM+PE ++ Y DIW
Sbjct: 158 -------SMANSFVGTRSYMSPERLQGTHYSVQSDIW 187
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 75/180 (41%), Gaps = 21/180 (11%)
Query: 52 LKREATICHMLKHPHVVELLETYSSEG----MLYMVFEYMDGSDICFEIVRRATAGFVYS 107
+REA L HP +V + +T +E + Y+V EY+DG + +
Sbjct: 76 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDG--VTLRDIVHTEGPMTPK 133
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQL 167
A+ + +AL + H+N IIHRD+KP ++++ VK+ FG+A + D
Sbjct: 134 RAI--EVIADACQALNFSHQNGIIHRDVKPANIMISATNA---VKVMDFGIARAIAD--- 185
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIWXXXXXXXXXXXXXXPFVG 227
SG + T+ IGT Y++PE D++ PF G
Sbjct: 186 --SG-----NSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTG 238
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 23/157 (14%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE + H P++V + S+G + + E+MDG + +++++A E +
Sbjct: 53 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLD-QVLKKAGR---IPEQILGK 108
Query: 114 YMRQVLEALRYCHEN-DIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGG 172
V++ L Y E I+HRD+KP +L+ ++ +KL FGV+ QL D
Sbjct: 109 VSIAVIKGLTYLREKHKIMHRDVKPSNILVNSR---GEIKLCDFGVSGQLID-------- 157
Query: 173 ERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+ A +GT YM+PE ++ Y DIW
Sbjct: 158 -------SMANSFVGTRSYMSPERLQGTHYSVQSDIW 187
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 76/164 (46%), Gaps = 28/164 (17%)
Query: 54 REATICHMLK---HPHVVELLETYSS-----EGMLYMVFEYMDGSDICFEIVRRATAGFV 105
RE + L+ HP+VV L++ ++ E + +VFE++D + + +A +
Sbjct: 52 REVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTY--LDKAPPPGL 109
Query: 106 YSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDG 165
+E + MRQ L L + H N I+HRD+KP +L+ + VKL FG+A
Sbjct: 110 PAETI-KDLMRQFLRGLDFLHANCIVHRDLKPENILVT---SGGTVKLADFGLA------ 159
Query: 166 QLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
R+ Y + T Y APEV+ Y PVD+W
Sbjct: 160 --------RIYSYQMALFPVVVTLWYRAPEVLLQSTYATPVDMW 195
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 23/157 (14%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE + H P++V + S+G + + E+MDG + +++++A E +
Sbjct: 115 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLD-QVLKKAGR---IPEQILGK 170
Query: 114 YMRQVLEALRYCHEN-DIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGG 172
V++ L Y E I+HRD+KP +L+ ++ +KL FGV+ QL D
Sbjct: 171 VSIAVIKGLTYLREKHKIMHRDVKPSNILVNSR---GEIKLCDFGVSGQLID-------- 219
Query: 173 ERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+ A +GT YM+PE ++ Y DIW
Sbjct: 220 -------SMANSFVGTRSYMSPERLQGTHYSVQSDIW 249
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 73/157 (46%), Gaps = 23/157 (14%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE + H P++V + S+G + + E+MDG + +++++A E +
Sbjct: 53 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLD-QVLKKAGR---IPEQILGK 108
Query: 114 YMRQVLEALRYCHEN-DIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGG 172
V++ L Y E I+HRD+KP +L+ ++ +KL FGV+ QL D
Sbjct: 109 VSIAVIKGLTYLREKHKIMHRDVKPSNILVNSR---GEIKLCDFGVSGQLID-------- 157
Query: 173 ERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+ A +GT YM+PE ++ Y DIW
Sbjct: 158 -------SMANSFVGTRSYMSPERLQGTHYSVQSDIW 187
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 22/162 (13%)
Query: 48 TEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYS 107
E L+RE I L HP+++ L + +Y++ EY ++ E+ + T +
Sbjct: 66 VEHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCT----FD 121
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQL 167
E + M ++ +AL YCH +IHRDIKP +LL K + FG ++
Sbjct: 122 EQRTATIMEELADALMYCHGKKVIHRDIKPENLLLGLKGELK---IADFGWSVHAP---- 174
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+ + GT Y+ PE+IE + + + VD+W
Sbjct: 175 -----------SLRRKTMCGTLDYLPPEMIEGRMHNEKVDLW 205
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 25/160 (15%)
Query: 52 LKREATICHMLKHPHVVELLETYSSEG----MLYMVFEYMDGSDICFEIVRRATAGFVYS 107
+REA L HP +V + T +E + Y+V EY+DG + +
Sbjct: 59 FRREAQNAAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDG--VTLRDIVHTEGPMTPK 116
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQL 167
A+ + +AL + H+N IIHRD+KP ++++ VK+ FG+A + D
Sbjct: 117 RAI--EVIADACQALNFSHQNGIIHRDVKPANIMISATNA---VKVMDFGIARAIAD--- 168
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVD 207
SG + T+ IGT Y++PE Q G VD
Sbjct: 169 --SG-----NSVTQTAAVIGTAQYLSPE----QARGDSVD 197
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 72/157 (45%), Gaps = 23/157 (14%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE + H P++V + S+G + + E+MDG + +++++A E +
Sbjct: 56 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLD-QVLKKAGR---IPEQILGK 111
Query: 114 YMRQVLEALRYCHEN-DIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGG 172
V++ L Y E I+HRD+KP +L+ ++ +KL FGV+ QL D
Sbjct: 112 VSIAVIKGLTYLREKHKIMHRDVKPSNILVNSR---GEIKLCDFGVSGQLID-------- 160
Query: 173 ERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
A +GT YM+PE ++ Y DIW
Sbjct: 161 -------EMANEFVGTRSYMSPERLQGTHYSVQSDIW 190
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 25/160 (15%)
Query: 52 LKREATICHMLKHPHVVELLETYSSEG----MLYMVFEYMDGSDICFEIVRRATAGFVYS 107
+REA L HP +V + +T +E + Y+V EY+DG + +
Sbjct: 59 FRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDG--VTLRDIVHTEGPMTPK 116
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQL 167
A+ + +AL + H+N IIHRD+KP +L++ VK+ FG+A + D
Sbjct: 117 RAI--EVIADACQALNFSHQNGIIHRDVKPANILISATNA---VKVVDFGIARAIAD--- 168
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVD 207
SG + + IGT Y++PE Q G VD
Sbjct: 169 --SG-----NSVXQTAAVIGTAQYLSPE----QARGDSVD 197
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 19/130 (14%)
Query: 80 LYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHC 139
L++ E+ D + I +R G + +A Q+ + + Y H +IHRD+KP
Sbjct: 109 LFIQMEFCDKGTLEQWIEKRR--GEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSN 166
Query: 140 VLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIED 199
+ L + + VK+G FG+ L++ D T++ GT YM+PE I
Sbjct: 167 IFLVD---TKQVKIGDFGLVTSLKN-----------DGKRTRSK---GTLRYMSPEQISS 209
Query: 200 QKYGKPVDIW 209
Q YGK VD++
Sbjct: 210 QDYGKEVDLY 219
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 25/165 (15%)
Query: 54 REATICHMLKHPHVVELLETYSSEGM--------LYMVFEYMDGSDICFEIVRRATAGFV 105
RE I +LKH +VV L+E ++ +Y+VF++ + D+ ++ F
Sbjct: 66 REIKILQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCE-HDLA-GLLSNVLVKFT 123
Query: 106 YSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDG 165
SE M+ +L L Y H N I+HRD+K VL+ +KL FG+A
Sbjct: 124 LSEI--KRVMQMLLNGLYYIHRNKILHRDMKAANVLIT---RDGVLKLADFGLARAFSLA 178
Query: 166 QLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
+ + + +R+ T Y PE++ ++ YG P+D+W
Sbjct: 179 K---------NSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLW 214
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 70/163 (42%), Gaps = 33/163 (20%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGS-----DICFEIVRRATAGFVYSE 108
RE ++ LKH ++V L + +E L +VFEY+D D C I+
Sbjct: 49 REVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKL---- 104
Query: 109 AVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLY 168
++ Q+L L YCH ++HRD+KP +L+ + +KL FG+A
Sbjct: 105 -----FLFQLLRGLAYCHRQKVLHRDLKPQNLLINER---GELKLADFGLA--------- 147
Query: 169 CSGGERLDHYTTKA-GHRIGTPHYMAPEV-IEDQKYGKPVDIW 209
R TK + + T Y P++ + Y +D+W
Sbjct: 148 -----RAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMW 185
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 74/164 (45%), Gaps = 31/164 (18%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGS-----DICFEIVRRATAGFVYSE 108
RE ++ L+H +++EL L+++FEY + D ++ R F+Y
Sbjct: 82 REVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLY-- 139
Query: 109 AVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENS-APV-KLGGFGVAIQLQDGQ 166
Q++ + +CH +HRD+KP +LL+ + S PV K+G FG+A
Sbjct: 140 --------QLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF---- 187
Query: 167 LYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
G + +T H I T Y PE++ + Y VDIW
Sbjct: 188 -----GIPIRQFT----HEIITLWYRPPEILLGSRHYSTSVDIW 222
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 71/159 (44%), Gaps = 24/159 (15%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
+E I L+HP +V L ++ E ++MV + + G D+ + + + + E
Sbjct: 64 KELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVH----FKEETVKL 119
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
++ +++ AL Y IIHRD+KP +LL + V + F +A L
Sbjct: 120 FICELVMALDYLQNQRIIHRDMKPDNILL---DEHGHVHITDFNIAAML----------P 166
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQK---YGKPVDIW 209
R TT A GT YMAPE+ +K Y VD W
Sbjct: 167 RETQITTMA----GTKPYMAPEMFSSRKGAGYSFAVDWW 201
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 75/168 (44%), Gaps = 30/168 (17%)
Query: 82 MVFEYMDGSDI--CFEIVRRATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHC 139
+VFEY++ +D ++I+ F YM ++L+AL YCH I+HRD+KPH
Sbjct: 112 LVFEYINNTDFKQLYQILTDFDIRF---------YMYELLKALDYCHSKGIMHRDVKPHN 162
Query: 140 VLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIED 199
V++ +++ ++L +G+A Q Y R+ + ++ PE++ D
Sbjct: 163 VMIDHQQKK--LRLIDWGLAEFYHPAQEYNV--------------RVASRYFKGPELLVD 206
Query: 200 -QKYGKPVDIWXXXXXXXXXXXXXXPFVGSRDRLFQSITKGKLHILGC 246
Q Y +D+W PF +D Q + K +LG
Sbjct: 207 YQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAK--VLGT 252
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 75/168 (44%), Gaps = 30/168 (17%)
Query: 82 MVFEYMDGSDI--CFEIVRRATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHC 139
+VFEY++ +D ++I+ F YM ++L+AL YCH I+HRD+KPH
Sbjct: 117 LVFEYINNTDFKQLYQILTDFDIRF---------YMYELLKALDYCHSKGIMHRDVKPHN 167
Query: 140 VLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIED 199
V++ +++ ++L +G+A Q Y R+ + ++ PE++ D
Sbjct: 168 VMIDHQQKK--LRLIDWGLAEFYHPAQEYNV--------------RVASRYFKGPELLVD 211
Query: 200 -QKYGKPVDIWXXXXXXXXXXXXXXPFVGSRDRLFQSITKGKLHILGC 246
Q Y +D+W PF +D Q + K +LG
Sbjct: 212 YQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAK--VLGT 257
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 64/146 (43%), Gaps = 21/146 (14%)
Query: 65 PHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEALRY 124
P + S L++ E+ D + I +R G + +A Q+ + + Y
Sbjct: 80 PETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR--GEKLDKVLALELFEQITKGVDY 137
Query: 125 CHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQ-DGQLYCSGGERLDHYTTKAG 183
H +I+RD+KP + L + + VK+G FG+ L+ DG+ S G
Sbjct: 138 IHSKKLINRDLKPSNIFLVD---TKQVKIGDFGLVTSLKNDGKRXRSKG----------- 183
Query: 184 HRIGTPHYMAPEVIEDQKYGKPVDIW 209
T YM+PE I Q YGK VD++
Sbjct: 184 ----TLRYMSPEQISSQDYGKEVDLY 205
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 82/182 (45%), Gaps = 21/182 (11%)
Query: 47 TTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVY 106
TTE + H+ + P +V L + +E L+++ +Y++G ++ + +R +
Sbjct: 101 TTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRER----F 156
Query: 107 SEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQ 166
+E Y+ +++ AL + H+ II+RDIK +LL +++ V L FG++
Sbjct: 157 TEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILL---DSNGHVVLTDFGLS------- 206
Query: 167 LYCSGGERLDHYTTKAGHRIGTPHYMAPEVIE--DQKYGKPVDIWXXXXXXXXXXXXXXP 224
E + T +A GT YMAP+++ D + K VD W P
Sbjct: 207 -----KEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASP 261
Query: 225 FV 226
F
Sbjct: 262 FT 263
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 73/168 (43%), Gaps = 34/168 (20%)
Query: 54 REATICHMLKHPHVVELLETYSSEG------MLYMVFEYMDGSDICFEIVRRATAGFVYS 107
RE I ++KHP+VV+L + S G L +V EY+ E V RA+ +
Sbjct: 81 RELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVP------ETVYRASRHYAKL 134
Query: 108 EAVASH-----YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
+ YM Q+L +L Y H I HRDIKP +LL S +KL FG A L
Sbjct: 135 KQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLL--DPPSGVLKLIDFGSAKIL 192
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVI-EDQKYGKPVDIW 209
G+ S I + +Y APE+I Y +DIW
Sbjct: 193 IAGEPNVS--------------XICSRYYRAPELIFGATNYTTNIDIW 226
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 68/162 (41%), Gaps = 18/162 (11%)
Query: 48 TEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYS 107
+E D EA + L HP +V+L + + +VFE+M+ C R G +
Sbjct: 45 SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHG--CLSDYLRTQRGLFAA 102
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQL 167
E + + V E + Y E +IHRD+ L+ EN +K+ FG+ + D
Sbjct: 103 ETLLGMCL-DVCEGMAYLEEASVIHRDLAARNCLVG--ENQV-IKVSDFGMTRFVLD--- 155
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
D YT+ G + + +PEV +Y D+W
Sbjct: 156 --------DQYTSSTGTKFPV-KWASPEVFSFSRYSSKSDVW 188
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 72/145 (49%), Gaps = 22/145 (15%)
Query: 66 HVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRAT-AGFVYSEAVASHYMRQVLEALRY 124
+V+ +LE ++ + M FE + S +E++++ GF S + + +L+ L
Sbjct: 160 NVIHMLENFTFRNHICMTFELL--SMNLYELIKKNKFQGF--SLPLVRKFAHSILQCLDA 215
Query: 125 CHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGH 184
H+N IIH D+KP +LL + S +K+ FG + C +R+ YT
Sbjct: 216 LHKNRIIHCDLKPENILLKQQGRSG-IKVIDFGSS---------CYEHQRV--YTX---- 259
Query: 185 RIGTPHYMAPEVIEDQKYGKPVDIW 209
I + Y APEVI +YG P+D+W
Sbjct: 260 -IQSRFYRAPEVILGARYGMPIDMW 283
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 72/145 (49%), Gaps = 22/145 (15%)
Query: 66 HVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRAT-AGFVYSEAVASHYMRQVLEALRY 124
+V+ +LE ++ + M FE + S +E++++ GF S + + +L+ L
Sbjct: 160 NVIHMLENFTFRNHICMTFELL--SMNLYELIKKNKFQGF--SLPLVRKFAHSILQCLDA 215
Query: 125 CHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGH 184
H+N IIH D+KP +LL + S +K+ FG + C +R+ YT
Sbjct: 216 LHKNRIIHCDLKPENILLKQQGRSG-IKVIDFGSS---------CYEHQRV--YTX---- 259
Query: 185 RIGTPHYMAPEVIEDQKYGKPVDIW 209
I + Y APEVI +YG P+D+W
Sbjct: 260 -IQSRFYRAPEVILGARYGMPIDMW 283
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 75/166 (45%), Gaps = 26/166 (15%)
Query: 82 MVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVL 141
+VFE+++ +D F+ +R+ + YM ++L+AL YCH I+HRD+KPH V+
Sbjct: 111 LVFEHVNNTD--FKQLRQTLTDYD-----IRFYMYEILKALDYCHSMGIMHRDVKPHNVM 163
Query: 142 LANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIED-Q 200
+ ++ ++L +G+A GQ Y R+ + ++ PE++ D Q
Sbjct: 164 IDHEHRK--LRLIDWGLAEFYHPGQEYNV--------------RVASRYFKGPELLVDYQ 207
Query: 201 KYGKPVDIWXXXXXXXXXXXXXXPFVGSRDRLFQSITKGKLHILGC 246
Y +D+W PF D Q + K +LG
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK--VLGT 251
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 78/170 (45%), Gaps = 20/170 (11%)
Query: 43 LNHYTTEAD---LKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRR 99
L T +AD + REA I H L +P++V L+ +E ++ +V E G + +V +
Sbjct: 45 LKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALM-LVMEMAGGGPLHKFLVGK 103
Query: 100 ATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVA 159
V + A H QV ++Y E + +HRD+ VLL N+ + K+ FG++
Sbjct: 104 REEIPVSNVAELLH---QVSMGMKYLEEKNFVHRDLAARNVLLVNRHYA---KISDFGLS 157
Query: 160 IQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
L G +YT ++ + Y APE I +K+ D+W
Sbjct: 158 KAL---------GADDSYYTARSAGKWPLKWY-APECINFRKFSSRSDVW 197
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 79/194 (40%), Gaps = 21/194 (10%)
Query: 52 LKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVA 111
+K E L+H H+ +L + ++MV EY G ++ I+ + SE
Sbjct: 55 IKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRL----SEEET 110
Query: 112 SHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSG 171
RQ++ A+ Y H HRD+KP +L + +KL FG+ + + + Y
Sbjct: 111 RVVFRQIVSAVAYVHSQGYAHRDLKPENLLF---DEYHKLKLIDFGLCAKPKGNKDY--- 164
Query: 172 GERLDHYTTKAGHRIGTPHYMAPEVIEDQKY-GKPVDIWXXXXXXXXXXXXXXPFVGSRD 230
H T G+ Y APE+I+ + Y G D+W PF
Sbjct: 165 -----HLQTCC----GSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNV 215
Query: 231 -RLFQSITKGKLHI 243
L++ I +GK +
Sbjct: 216 MALYKKIMRGKYDV 229
Score = 32.0 bits (71), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 16/21 (76%)
Query: 1 MLSVDPNKRITIHEVINHKWL 21
ML VDP KRI++ ++NH W+
Sbjct: 244 MLQVDPKKRISMKNLLNHPWI 264
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 68/162 (41%), Gaps = 18/162 (11%)
Query: 48 TEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYS 107
+E D EA + L HP +V+L + + +VFE+M+ C R G +
Sbjct: 48 SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHG--CLSDYLRTQRGLFAA 105
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQL 167
E + + V E + Y E +IHRD+ L+ EN +K+ FG+ + D
Sbjct: 106 ETLLGMCL-DVCEGMAYLEEACVIHRDLAARNCLVG--ENQV-IKVSDFGMTRFVLD--- 158
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
D YT+ G + + +PEV +Y D+W
Sbjct: 159 --------DQYTSSTGTKFPV-KWASPEVFSFSRYSSKSDVW 191
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 68/150 (45%), Gaps = 28/150 (18%)
Query: 63 KHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRR--ATAGFVYSEAVASHYMRQVLE 120
+HP V L + + G+LY+ +++C +++ G EA Y+R L
Sbjct: 115 QHPCCVRLEQAWEEGGILYLQ------TELCGPSLQQHCEAWGASLPEAQVWGYLRDTLL 168
Query: 121 ALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTT 180
AL + H ++H D+KP + L + KLG FG+ ++L T
Sbjct: 169 ALAHLHSQGLVHLDVKPANIFLGPRGR---CKLGDFGLLVELG---------------TA 210
Query: 181 KAGH-RIGTPHYMAPEVIEDQKYGKPVDIW 209
AG + G P YMAPE+++ YG D++
Sbjct: 211 GAGEVQEGDPRYMAPELLQG-SYGTAADVF 239
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 68/162 (41%), Gaps = 18/162 (11%)
Query: 48 TEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYS 107
+E D EA + L HP +V+L + + +VFE+M+ C R G +
Sbjct: 45 SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHG--CLSDYLRTQRGLFAA 102
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQL 167
E + + V E + Y E +IHRD+ L+ EN +K+ FG+ + D
Sbjct: 103 ETLLGMCL-DVCEGMAYLEEACVIHRDLAARNCLVG--ENQV-IKVSDFGMTRFVLD--- 155
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
D YT+ G + + +PEV +Y D+W
Sbjct: 156 --------DQYTSSTGTKFPV-KWASPEVFSFSRYSSKSDVW 188
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 68/162 (41%), Gaps = 18/162 (11%)
Query: 48 TEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYS 107
+E D EA + L HP +V+L + + +VFE+M+ C R G +
Sbjct: 65 SEDDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHG--CLSDYLRTQRGLFAA 122
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQL 167
E + + V E + Y E +IHRD+ L+ EN +K+ FG+ + D
Sbjct: 123 ETLLGMCL-DVCEGMAYLEEACVIHRDLAARNCLVG--ENQV-IKVSDFGMTRFVLD--- 175
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
D YT+ G + + +PEV +Y D+W
Sbjct: 176 --------DQYTSSTGTKFPV-KWASPEVFSFSRYSSKSDVW 208
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 68/162 (41%), Gaps = 18/162 (11%)
Query: 48 TEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYS 107
+E D EA + L HP +V+L + + +VFE+M+ C R G +
Sbjct: 43 SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHG--CLSDYLRTQRGLFAA 100
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQL 167
E + + V E + Y E +IHRD+ L+ EN +K+ FG+ + D
Sbjct: 101 ETLLGMCL-DVCEGMAYLEEACVIHRDLAARNCLVG--ENQV-IKVSDFGMTRFVLD--- 153
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
D YT+ G + + +PEV +Y D+W
Sbjct: 154 --------DQYTSSTGTKFPV-KWASPEVFSFSRYSSKSDVW 186
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 75/157 (47%), Gaps = 21/157 (13%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE + LKH ++V L + S+ L +VFE+ D + + G + E V S
Sbjct: 50 REICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQD---LKKYFDSCNGDLDPEIVKS- 105
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
++ Q+L+ L +CH +++HRD+KP +L+ + +KL FG+A G
Sbjct: 106 FLFQLLKGLGFCHSRNVLHRDLKPQNLLI---NRNGELKLANFGLARAF---------GI 153
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
+ Y+ + + T Y P+V+ K Y +D+W
Sbjct: 154 PVRCYSAE----VVTLWYRPPDVLFGAKLYSTSIDMW 186
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 31/171 (18%)
Query: 52 LKREATICHMLKHPHVVE--------LLETYSSEGMLYMVFEYMDGSDICFEIVRRATAG 103
LKR T C + +V L + E LY+V +Y G D+ + +
Sbjct: 129 LKRAETACFREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDK- 187
Query: 104 FVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQ 163
E +A Y+ +++ A+ H+ +HRDIKP VLL + + ++L FG +++
Sbjct: 188 --LPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLL---DVNGHIRLADFGSCLKMN 242
Query: 164 DGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQ-----KYGKPVDIW 209
D T ++ +GTP Y++PE+++ KYG D W
Sbjct: 243 DDG------------TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWW 281
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 66/142 (46%), Gaps = 23/142 (16%)
Query: 73 TYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEALRYCHENDIIH 132
+ E LY+V +Y G D+ + + E +A Y+ +++ A+ H+ +H
Sbjct: 142 AFQDENHLYLVMDYYVGGDLLTLLSKFEDK---LPEDMARFYIGEMVLAIDSIHQLHYVH 198
Query: 133 RDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYM 192
RDIKP VLL + + ++L FG +++ D T ++ +GTP Y+
Sbjct: 199 RDIKPDNVLL---DVNGHIRLADFGSCLKMNDDG------------TVQSSVAVGTPDYI 243
Query: 193 APEVIEDQ-----KYGKPVDIW 209
+PE+++ KYG D W
Sbjct: 244 SPEILQAMEDGMGKYGPECDWW 265
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 88/187 (47%), Gaps = 26/187 (13%)
Query: 58 ICHMLKHPHVVELLETYSSE--GMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYM 115
+ +++ P++V+LL+ + ++FEY++ +D F+++ + +Y+
Sbjct: 79 LQNLMGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTD--FKVLYPTLTDYD-----IRYYI 131
Query: 116 RQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERL 175
++L+AL YCH I+HRD+KPH V++ ++ ++L +G+A + Y G E
Sbjct: 132 YELLKALDYCHSQGIMHRDVKPHNVMIDHELRK--LRLIDWGLA------EFYHPGKE-- 181
Query: 176 DHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIWXXXXXXXXXXXXXXPFVGSRDRLFQ 234
Y R+ + ++ PE++ D Q Y +D+W PF D Q
Sbjct: 182 --YNV----RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQ 235
Query: 235 SITKGKL 241
+ K+
Sbjct: 236 LVKIAKV 242
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 75/157 (47%), Gaps = 21/157 (13%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
RE + LKH ++V L + S+ L +VFE+ D + + G + E V S
Sbjct: 50 REICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQD---LKKYFDSCNGDLDPEIVKS- 105
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
++ Q+L+ L +CH +++HRD+KP +L+ + +KL FG+A G
Sbjct: 106 FLFQLLKGLGFCHSRNVLHRDLKPQNLLI---NRNGELKLADFGLARAF---------GI 153
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
+ Y+ + + T Y P+V+ K Y +D+W
Sbjct: 154 PVRCYSAE----VVTLWYRPPDVLFGAKLYSTSIDMW 186
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 21/144 (14%)
Query: 67 VVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEALRYCH 126
V+ LL+ + ++ E M+ F+ + A E +A + QVLEA+R+CH
Sbjct: 75 VIRLLDWFERPDSFVLILERMEPVQDLFDFITERGA---LQEELARSFFWQVLEAVRHCH 131
Query: 127 ENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRI 186
++HRDIK +L+ N +KL FG L+D YT G R+
Sbjct: 132 NCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKDTV-----------YTDFDGTRV 178
Query: 187 GTPHYMAPEVIEDQKY-GKPVDIW 209
+P PE I +Y G+ +W
Sbjct: 179 YSP----PEWIRYHRYHGRSAAVW 198
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 84/180 (46%), Gaps = 26/180 (14%)
Query: 65 PHVVELLETYSSE--GMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEAL 122
P++V+LL+ + ++FEY++ +D F+++ + +Y+ ++L+AL
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTD--FKVLYPTLTDYD-----IRYYIYELLKAL 138
Query: 123 RYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKA 182
YCH I+HRD+KPH V++ ++ ++L +G+A + Y G E Y
Sbjct: 139 DYCHSQGIMHRDVKPHNVMIDHELRK--LRLIDWGLA------EFYHPGKE----YNV-- 184
Query: 183 GHRIGTPHYMAPEVIED-QKYGKPVDIWXXXXXXXXXXXXXXPFVGSRDRLFQSITKGKL 241
R+ + ++ PE++ D Q Y +D+W PF D Q + K+
Sbjct: 185 --RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKV 242
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 84/180 (46%), Gaps = 26/180 (14%)
Query: 65 PHVVELLETYSSE--GMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEAL 122
P++V+LL+ + ++FEY++ +D F+++ + +Y+ ++L+AL
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTD--FKVLYPTLTDYD-----IRYYIYELLKAL 138
Query: 123 RYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKA 182
YCH I+HRD+KPH V++ ++ ++L +G+A + Y G E Y
Sbjct: 139 DYCHSQGIMHRDVKPHNVMIDHELRK--LRLIDWGLA------EFYHPGKE----YNV-- 184
Query: 183 GHRIGTPHYMAPEVIED-QKYGKPVDIWXXXXXXXXXXXXXXPFVGSRDRLFQSITKGKL 241
R+ + ++ PE++ D Q Y +D+W PF D Q + K+
Sbjct: 185 --RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKV 242
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 84/180 (46%), Gaps = 26/180 (14%)
Query: 65 PHVVELLETYSSE--GMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEAL 122
P++V+LL+ + ++FEY++ +D F+++ + +Y+ ++L+AL
Sbjct: 87 PNIVKLLDIVRDQHSKTPSLIFEYVNNTD--FKVLYPTLTDYD-----IRYYIYELLKAL 139
Query: 123 RYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKA 182
YCH I+HRD+KPH V++ ++ ++L +G+A + Y G E Y
Sbjct: 140 DYCHSQGIMHRDVKPHNVMIDHELRK--LRLIDWGLA------EFYHPGKE----YNV-- 185
Query: 183 GHRIGTPHYMAPEVIED-QKYGKPVDIWXXXXXXXXXXXXXXPFVGSRDRLFQSITKGKL 241
R+ + ++ PE++ D Q Y +D+W PF D Q + K+
Sbjct: 186 --RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKV 243
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 84/180 (46%), Gaps = 26/180 (14%)
Query: 65 PHVVELLETYSSE--GMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEAL 122
P++V+LL+ + ++FEY++ +D F+++ + +Y+ ++L+AL
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTD--FKVLYPTLTDYD-----IRYYIYELLKAL 138
Query: 123 RYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKA 182
YCH I+HRD+KPH V++ ++ ++L +G+A + Y G E Y
Sbjct: 139 DYCHSQGIMHRDVKPHNVMIDHELRK--LRLIDWGLA------EFYHPGKE----YNV-- 184
Query: 183 GHRIGTPHYMAPEVIED-QKYGKPVDIWXXXXXXXXXXXXXXPFVGSRDRLFQSITKGKL 241
R+ + ++ PE++ D Q Y +D+W PF D Q + K+
Sbjct: 185 --RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKV 242
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 84/180 (46%), Gaps = 26/180 (14%)
Query: 65 PHVVELLETYSSE--GMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEAL 122
P++V+LL+ + ++FEY++ +D F+++ + +Y+ ++L+AL
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTD--FKVLYPTLTDYD-----IRYYIYELLKAL 138
Query: 123 RYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKA 182
YCH I+HRD+KPH V++ ++ ++L +G+A + Y G E Y
Sbjct: 139 DYCHSQGIMHRDVKPHNVMIDHELRK--LRLIDWGLA------EFYHPGKE----YNV-- 184
Query: 183 GHRIGTPHYMAPEVIED-QKYGKPVDIWXXXXXXXXXXXXXXPFVGSRDRLFQSITKGKL 241
R+ + ++ PE++ D Q Y +D+W PF D Q + K+
Sbjct: 185 --RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKV 242
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 84/180 (46%), Gaps = 26/180 (14%)
Query: 65 PHVVELLETYSSE--GMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEAL 122
P++V+LL+ + ++FEY++ +D F+++ + +Y+ ++L+AL
Sbjct: 87 PNIVKLLDIVRDQHSKTPSLIFEYVNNTD--FKVLYPTLTDYD-----IRYYIYELLKAL 139
Query: 123 RYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKA 182
YCH I+HRD+KPH V++ ++ ++L +G+A + Y G E Y
Sbjct: 140 DYCHSQGIMHRDVKPHNVMIDHELRK--LRLIDWGLA------EFYHPGKE----YNV-- 185
Query: 183 GHRIGTPHYMAPEVIED-QKYGKPVDIWXXXXXXXXXXXXXXPFVGSRDRLFQSITKGKL 241
R+ + ++ PE++ D Q Y +D+W PF D Q + K+
Sbjct: 186 --RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKV 243
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 60/134 (44%), Gaps = 19/134 (14%)
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
YM ++L+AL YCH I+HRD+KPH VL+ ++ ++L +G+A GQ Y
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVLIDHEHRK--LRLIDWGLAEFYHPGQEYNV--- 190
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIWXXXXXXXXXXXXXXPFVGSRDRL 232
R+ + ++ PE++ D Q Y +D+W PF D
Sbjct: 191 -----------RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNY 239
Query: 233 FQSITKGKLHILGC 246
Q + K +LG
Sbjct: 240 DQLVRIAK--VLGT 251
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 84/180 (46%), Gaps = 26/180 (14%)
Query: 65 PHVVELLETYSSE--GMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEAL 122
P++V+LL+ + ++FEY++ +D F+++ + +Y+ ++L+AL
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTD--FKVLYPTLTDYD-----IRYYIYELLKAL 138
Query: 123 RYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKA 182
YCH I+HRD+KPH V++ ++ ++L +G+A + Y G E Y
Sbjct: 139 DYCHSQGIMHRDVKPHNVMIDHELRK--LRLIDWGLA------EFYHPGKE----YNV-- 184
Query: 183 GHRIGTPHYMAPEVIED-QKYGKPVDIWXXXXXXXXXXXXXXPFVGSRDRLFQSITKGKL 241
R+ + ++ PE++ D Q Y +D+W PF D Q + K+
Sbjct: 185 --RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKV 242
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 85/204 (41%), Gaps = 39/204 (19%)
Query: 31 IEPASFGLPDE--------RLNHYTTEADLKRE-----ATICHMLKHPHVVELLETYSSE 77
+E +FGL E ++ T AD K + H+ +H ++V LL +
Sbjct: 63 VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHG 122
Query: 78 GMLYMVFEYMDGSDICFEIVRRATAGFVYS--------EAVAS----HYMRQVLEALRYC 125
G + ++ EY D+ + R+ G YS E ++S H+ QV + + +
Sbjct: 123 GPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFL 182
Query: 126 HENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHR 185
+ IHRD+ VLL N + K+G FG+A + + +Y K R
Sbjct: 183 ASKNCIHRDVAARNVLLTNGHVA---KIGDFGLARDIMND----------SNYIVKGNAR 229
Query: 186 IGTPHYMAPEVIEDQKYGKPVDIW 209
+ +MAPE I D Y D+W
Sbjct: 230 LPV-KWMAPESIFDCVYTVQSDVW 252
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 84/180 (46%), Gaps = 26/180 (14%)
Query: 65 PHVVELLETYSSE--GMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEAL 122
P++V+LL+ + ++FEY++ +D F+++ + +Y+ ++L+AL
Sbjct: 88 PNIVKLLDIVRDQHSKTPSLIFEYVNNTD--FKVLYPTLTDYD-----IRYYIYELLKAL 140
Query: 123 RYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKA 182
YCH I+HRD+KPH V++ ++ ++L +G+A + Y G E Y
Sbjct: 141 DYCHSQGIMHRDVKPHNVMIDHELRK--LRLIDWGLA------EFYHPGKE----YNV-- 186
Query: 183 GHRIGTPHYMAPEVIED-QKYGKPVDIWXXXXXXXXXXXXXXPFVGSRDRLFQSITKGKL 241
R+ + ++ PE++ D Q Y +D+W PF D Q + K+
Sbjct: 187 --RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKV 244
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 76/175 (43%), Gaps = 31/175 (17%)
Query: 50 ADLKREATICHML-KHPHVVELLETYSSEGMLYMVFEYMD--------------GSDICF 94
+DL E + M+ KH +++ LL + +G LY++ EY G + +
Sbjct: 85 SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY 144
Query: 95 EIVRRATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLG 154
+I R + + V+ Y Q+ + Y IHRD+ VL+ EN+ +K+
Sbjct: 145 DINRVPEEQMTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVT--ENNV-MKIA 199
Query: 155 GFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
FG+A + + +D+Y R+ +MAPE + D+ Y D+W
Sbjct: 200 DFGLARDINN----------IDYYKNTTNGRLPV-KWMAPEALFDRVYTHQSDVW 243
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 76/175 (43%), Gaps = 31/175 (17%)
Query: 50 ADLKREATICHML-KHPHVVELLETYSSEGMLYMVFEYMD--------------GSDICF 94
+DL E + M+ KH +++ LL + +G LY++ EY G + +
Sbjct: 131 SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY 190
Query: 95 EIVRRATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLG 154
+I R + + V+ Y Q+ + Y IHRD+ VL+ EN+ +K+
Sbjct: 191 DINRVPEEQMTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVT--ENNV-MKIA 245
Query: 155 GFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
FG+A + + +D+Y R+ +MAPE + D+ Y D+W
Sbjct: 246 DFGLARDINN----------IDYYKKTTNGRLPV-KWMAPEALFDRVYTHQSDVW 289
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 71/145 (48%), Gaps = 22/145 (15%)
Query: 66 HVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRAT-AGFVYSEAVASHYMRQVLEALRY 124
+V+ +LE ++ + M FE + S +E++++ GF S + + +L+ L
Sbjct: 160 NVIHMLENFTFRNHICMTFELL--SMNLYELIKKNKFQGF--SLPLVRKFAHSILQCLDA 215
Query: 125 CHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGH 184
H+N IIH D+KP +LL + S +K+ FG + C +R+ Y
Sbjct: 216 LHKNRIIHCDLKPENILLKQQGRSG-IKVIDFGSS---------CYEHQRV--YXX---- 259
Query: 185 RIGTPHYMAPEVIEDQKYGKPVDIW 209
I + Y APEVI +YG P+D+W
Sbjct: 260 -IQSRFYRAPEVILGARYGMPIDMW 283
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 84/180 (46%), Gaps = 26/180 (14%)
Query: 65 PHVVELLETYSSE--GMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEAL 122
P++V+LL+ + ++FEY++ +D F+++ + +Y+ ++L+AL
Sbjct: 107 PNIVKLLDIVRDQHSKTPSLIFEYVNNTD--FKVLYPTLTDYD-----IRYYIYELLKAL 159
Query: 123 RYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKA 182
YCH I+HRD+KPH V++ ++ ++L +G+A + Y G E Y
Sbjct: 160 DYCHSQGIMHRDVKPHNVMIDHELRK--LRLIDWGLA------EFYHPGKE----YNV-- 205
Query: 183 GHRIGTPHYMAPEVIED-QKYGKPVDIWXXXXXXXXXXXXXXPFVGSRDRLFQSITKGKL 241
R+ + ++ PE++ D Q Y +D+W PF D Q + K+
Sbjct: 206 --RVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKV 263
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 87/199 (43%), Gaps = 29/199 (14%)
Query: 52 LKREATICHMLKH-PHVVELLETYSS--EGMLYMVFEYMDGSDICFEIVRRATAGFVYSE 108
+KRE I L+ P+++ L + +VFE+++ +D F+ + + +
Sbjct: 78 IKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTD--FKQLYQTLTDYD--- 132
Query: 109 AVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLY 168
YM ++L+AL YCH I+HRD+KPH V++ ++ ++L +G+A GQ Y
Sbjct: 133 --IRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRK--LRLIDWGLAEFYHPGQEY 188
Query: 169 CSGGERLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIWXXXXXXXXXXXXXXPFVG 227
R+ + ++ PE++ D Q Y +D+W PF
Sbjct: 189 NV--------------RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFH 234
Query: 228 SRDRLFQSITKGKLHILGC 246
D Q + K +LG
Sbjct: 235 GHDNYDQLVRIAK--VLGT 251
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 76/175 (43%), Gaps = 31/175 (17%)
Query: 50 ADLKREATICHML-KHPHVVELLETYSSEGMLYMVFEYMD--------------GSDICF 94
+DL E + M+ KH +++ LL + +G LY++ EY G + +
Sbjct: 72 SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY 131
Query: 95 EIVRRATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLG 154
+I R + + V+ Y Q+ + Y IHRD+ VL+ EN+ +K+
Sbjct: 132 DINRVPEEQMTFKDLVSCTY--QLARGMEYLASQKCIHRDLTARNVLVT--ENNV-MKIA 186
Query: 155 GFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
FG+A + + +D+Y R+ +MAPE + D+ Y D+W
Sbjct: 187 DFGLARDINN----------IDYYKKTTNGRLPV-KWMAPEALFDRVYTHQSDVW 230
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 76/175 (43%), Gaps = 31/175 (17%)
Query: 50 ADLKREATICHML-KHPHVVELLETYSSEGMLYMVFEYMD--------------GSDICF 94
+DL E + M+ KH +++ LL + +G LY++ EY G + +
Sbjct: 77 SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY 136
Query: 95 EIVRRATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLG 154
+I R + + V+ Y Q+ + Y IHRD+ VL+ EN+ +K+
Sbjct: 137 DINRVPEEQMTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVT--ENNV-MKIA 191
Query: 155 GFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
FG+A + + +D+Y R+ +MAPE + D+ Y D+W
Sbjct: 192 DFGLARDINN----------IDYYKKTTNGRLPV-KWMAPEALFDRVYTHQSDVW 235
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 76/175 (43%), Gaps = 31/175 (17%)
Query: 50 ADLKREATICHML-KHPHVVELLETYSSEGMLYMVFEYMD--------------GSDICF 94
+DL E + M+ KH +++ LL + +G LY++ EY G + +
Sbjct: 85 SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY 144
Query: 95 EIVRRATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLG 154
+I R + + V+ Y Q+ + Y IHRD+ VL+ EN+ +K+
Sbjct: 145 DINRVPEEQMTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVT--ENNV-MKIA 199
Query: 155 GFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
FG+A + + +D+Y R+ +MAPE + D+ Y D+W
Sbjct: 200 DFGLARDINN----------IDYYKKTTNGRLPV-KWMAPEALFDRVYTHQSDVW 243
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 76/175 (43%), Gaps = 31/175 (17%)
Query: 50 ADLKREATICHML-KHPHVVELLETYSSEGMLYMVFEYMD--------------GSDICF 94
+DL E + M+ KH +++ LL + +G LY++ EY G + +
Sbjct: 74 SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY 133
Query: 95 EIVRRATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLG 154
+I R + + V+ Y Q+ + Y IHRD+ VL+ EN+ +K+
Sbjct: 134 DINRVPEEQMTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVT--ENNV-MKIA 188
Query: 155 GFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
FG+A + + +D+Y R+ +MAPE + D+ Y D+W
Sbjct: 189 DFGLARDINN----------IDYYKKTTNGRLPV-KWMAPEALFDRVYTHQSDVW 232
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 19/157 (12%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
+EA + +KHP++V+LL + E Y++ E+M ++ + +R V AV
Sbjct: 63 KEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNL-LDYLRECNRQEV--NAVVLL 119
Query: 114 YM-RQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGG 172
YM Q+ A+ Y + + IHRD+ L+ EN VK+ FG++ +L G
Sbjct: 120 YMATQISSAMEYLEKKNFIHRDLAARNCLVG--ENHL-VKVADFGLS-RLMTG------- 168
Query: 173 ERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
D YT AG + + APE + K+ D+W
Sbjct: 169 ---DTYTAHAGAKFPI-KWTAPESLAYNKFSIKSDVW 201
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 17/156 (10%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
+EA + +KHP++V+LL + E Y++ E+M ++ + +R V S V +
Sbjct: 58 KEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNL-LDYLRECNRQEV-SAVVLLY 115
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Q+ A+ Y + + IHRD+ L+ EN VK+ FG++ +L G
Sbjct: 116 MATQISSAMEYLEKKNFIHRDLAARNCLVG--ENHL-VKVADFGLS-RLMTG-------- 163
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
D YT AG + + APE + K+ D+W
Sbjct: 164 --DTYTAHAGAKFPI-KWTAPESLAYNKFSIKSDVW 196
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 17/156 (10%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
+EA + +KHP++V+LL + E Y++ E+M ++ + +R V S V +
Sbjct: 58 KEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNL-LDYLRECNRQEV-SAVVLLY 115
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Q+ A+ Y + + IHRD+ L+ EN VK+ FG++ +L G
Sbjct: 116 MATQISSAMEYLEKKNFIHRDLAARNCLVG--ENHL-VKVADFGLS-RLMTG-------- 163
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
D YT AG + + APE + K+ D+W
Sbjct: 164 --DTYTAHAGAKFPI-KWTAPESLAYNKFSIKSDVW 196
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 75/167 (44%), Gaps = 27/167 (16%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDIC-----FEIVRRATAGFV 105
D K E I +K+ + + ++ +Y+++EYM+ I F ++ + F+
Sbjct: 89 DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFI 148
Query: 106 YSEAVASHYMRQVLEALRYCH-ENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQD 164
+ + ++ VL + Y H E +I HRD+KP +L+ + + VKL FG + + D
Sbjct: 149 PIQVIKC-IIKSVLNSFSYIHNEKNICHRDVKPSNILM---DKNGRVKLSDFGESEYMVD 204
Query: 165 GQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKY--GKPVDIW 209
++ G R GT +M PE ++ G VDIW
Sbjct: 205 KKI--------------KGSR-GTYEFMPPEFFSNESSYNGAKVDIW 236
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 39/203 (19%)
Query: 31 IEPASFGLPDE--------RLNHYTTEADLKRE-----ATICHMLKHPHVVELLETYSSE 77
+E +FGL E ++ T AD K + H+ +H ++V LL +
Sbjct: 63 VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHG 122
Query: 78 GMLYMVFEYMDGSDICFEIVRRAT------AGFVYSEAVAS-----HYMRQVLEALRYCH 126
G + ++ EY D+ +RR + F + + AS H+ QV + + +
Sbjct: 123 GPVLVITEYCCYGDL-LNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA 181
Query: 127 ENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRI 186
+ IHRD+ VLL N + K+G FG+A + + +Y K R+
Sbjct: 182 SKNCIHRDVAARNVLLTNGHVA---KIGDFGLARDIMND----------SNYIVKGNARL 228
Query: 187 GTPHYMAPEVIEDQKYGKPVDIW 209
+MAPE I D Y D+W
Sbjct: 229 PV-KWMAPESIFDCVYTVQSDVW 250
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 76/175 (43%), Gaps = 31/175 (17%)
Query: 50 ADLKREATICHML-KHPHVVELLETYSSEGMLYMVFEYMD--------------GSDICF 94
+DL E + M+ KH +++ LL + +G LY++ EY G + +
Sbjct: 85 SDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY 144
Query: 95 EIVRRATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLG 154
+I R + + V+ Y Q+ + Y IHRD+ VL+ EN+ +K+
Sbjct: 145 DINRVPEEQMTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVT--ENNV-MKIA 199
Query: 155 GFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
FG+A + + +D+Y R+ +MAPE + D+ Y D+W
Sbjct: 200 DFGLARDINN----------IDYYKKTTNGRLPV-KWMAPEALFDRVYTHQSDVW 243
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 19/134 (14%)
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
YM ++L+AL YCH I+HRD+KPH V++ ++ ++L +G+A GQ Y
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRK--LRLIDWGLAEFYHPGQEYNV--- 190
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIWXXXXXXXXXXXXXXPFVGSRDRL 232
R+ + ++ PE++ D Q Y +D+W PF D
Sbjct: 191 -----------RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNY 239
Query: 233 FQSITKGKLHILGC 246
Q + K +LG
Sbjct: 240 DQLVRIAK--VLGT 251
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 19/134 (14%)
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
YM ++L+AL YCH I+HRD+KPH V++ ++ ++L +G+A GQ Y
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRK--LRLIDWGLAEFYHPGQEYNV--- 190
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIWXXXXXXXXXXXXXXPFVGSRDRL 232
R+ + ++ PE++ D Q Y +D+W PF D
Sbjct: 191 -----------RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNY 239
Query: 233 FQSITKGKLHILGC 246
Q + K +LG
Sbjct: 240 DQLVRIAK--VLGT 251
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 19/134 (14%)
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
YM ++L+AL YCH I+HRD+KPH V++ ++ ++L +G+A GQ Y
Sbjct: 135 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRK--LRLIDWGLAEFYHPGQEYNV--- 189
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIWXXXXXXXXXXXXXXPFVGSRDRL 232
R+ + ++ PE++ D Q Y +D+W PF D
Sbjct: 190 -----------RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNY 238
Query: 233 FQSITKGKLHILGC 246
Q + K +LG
Sbjct: 239 DQLVRIAK--VLGT 250
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 19/134 (14%)
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
YM ++L+AL YCH I+HRD+KPH V++ ++ ++L +G+A GQ Y
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRK--LRLIDWGLAEFYHPGQEYNV--- 190
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIWXXXXXXXXXXXXXXPFVGSRDRL 232
R+ + ++ PE++ D Q Y +D+W PF D
Sbjct: 191 -----------RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNY 239
Query: 233 FQSITKGKLHILGC 246
Q + K +LG
Sbjct: 240 DQLVRIAK--VLGT 251
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 19/134 (14%)
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
YM ++L+AL YCH I+HRD+KPH V++ ++ ++L +G+A GQ Y
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRK--LRLIDWGLAEFYHPGQEYNV--- 190
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIWXXXXXXXXXXXXXXPFVGSRDRL 232
R+ + ++ PE++ D Q Y +D+W PF D
Sbjct: 191 -----------RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNY 239
Query: 233 FQSITKGKLHILGC 246
Q + K +LG
Sbjct: 240 DQLVRIAK--VLGT 251
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 19/134 (14%)
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
YM ++L+AL YCH I+HRD+KPH V++ ++ ++L +G+A GQ Y
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRK--LRLIDWGLAEFYHPGQEYNV--- 190
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIWXXXXXXXXXXXXXXPFVGSRDRL 232
R+ + ++ PE++ D Q Y +D+W PF D
Sbjct: 191 -----------RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNY 239
Query: 233 FQSITKGKLHILGC 246
Q + K +LG
Sbjct: 240 DQLVRIAK--VLGT 251
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDG-QLYCSGGE 173
RQ+LEAL Y H IIHRD+KP + + N VK+G FG+A + + +
Sbjct: 122 FRQILEALSYIHSQGIIHRDLKPMNIFIDESRN---VKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
L + IGT Y+A EV++ Y + +D++
Sbjct: 179 NLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMY 215
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 19/134 (14%)
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
YM ++L+AL YCH I+HRD+KPH V++ ++ ++L +G+A GQ Y
Sbjct: 135 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRK--LRLIDWGLAEFYHPGQEYNV--- 189
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIWXXXXXXXXXXXXXXPFVGSRDRL 232
R+ + ++ PE++ D Q Y +D+W PF D
Sbjct: 190 -----------RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNY 238
Query: 233 FQSITKGKLHILGC 246
Q + K +LG
Sbjct: 239 DQLVRIAK--VLGT 250
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 19/134 (14%)
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
YM ++L+AL YCH I+HRD+KPH V++ ++ ++L +G+A GQ Y
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRK--LRLIDWGLAEFYHPGQEYNV--- 190
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIWXXXXXXXXXXXXXXPFVGSRDRL 232
R+ + ++ PE++ D Q Y +D+W PF D
Sbjct: 191 -----------RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNY 239
Query: 233 FQSITKGKLHILGC 246
Q + K +LG
Sbjct: 240 DQLVRIAK--VLGT 251
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 19/134 (14%)
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
YM ++L+AL YCH I+HRD+KPH V++ ++ ++L +G+A GQ Y
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRK--LRLIDWGLAEFYHPGQEYNV--- 190
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIWXXXXXXXXXXXXXXPFVGSRDRL 232
R+ + ++ PE++ D Q Y +D+W PF D
Sbjct: 191 -----------RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNY 239
Query: 233 FQSITKGKLHILGC 246
Q + K +LG
Sbjct: 240 DQLVRIAK--VLGT 251
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 19/134 (14%)
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
YM ++L+AL YCH I+HRD+KPH V++ ++ ++L +G+A GQ Y
Sbjct: 134 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRK--LRLIDWGLAEFYHPGQEYNV--- 188
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIWXXXXXXXXXXXXXXPFVGSRDRL 232
R+ + ++ PE++ D Q Y +D+W PF D
Sbjct: 189 -----------RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNY 237
Query: 233 FQSITKGKLHILGC 246
Q + K +LG
Sbjct: 238 DQLVRIAK--VLGT 249
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDG-QLYCSGGE 173
RQ+LEAL Y H IIHRD+KP + + N VK+G FG+A + + +
Sbjct: 122 FRQILEALSYIHSQGIIHRDLKPMNIFIDESRN---VKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
L + IGT Y+A EV++ Y + +D++
Sbjct: 179 NLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMY 215
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 78/170 (45%), Gaps = 20/170 (11%)
Query: 43 LNHYTTEAD---LKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRR 99
L T +AD + REA I H L +P++V L+ +E ++ +V E G + +V +
Sbjct: 371 LKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALM-LVMEMAGGGPLHKFLVGK 429
Query: 100 ATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVA 159
V + A H QV ++Y E + +HR++ VLL N+ + K+ FG++
Sbjct: 430 REEIPVSNVAELLH---QVSMGMKYLEEKNFVHRNLAARNVLLVNRHYA---KISDFGLS 483
Query: 160 IQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
L G +YT ++ + Y APE I +K+ D+W
Sbjct: 484 KAL---------GADDSYYTARSAGKWPLKWY-APECINFRKFSSRSDVW 523
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 19/157 (12%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
+EA + +KHP++V+LL + E Y++ E+M ++ + +R V AV
Sbjct: 59 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL-LDYLRECNRQEV--NAVVLL 115
Query: 114 YM-RQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGG 172
YM Q+ A+ Y + + IHRD+ L+ EN VK+ FG++ +L G
Sbjct: 116 YMATQISSAMEYLEKKNFIHRDLAARNCLVG--ENHL-VKVADFGLS-RLMTG------- 164
Query: 173 ERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
D YT AG + + APE + K+ D+W
Sbjct: 165 ---DTYTAPAGAKFPI-KWTAPESLAYNKFSIKSDVW 197
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 19/134 (14%)
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
YM ++L+AL YCH I+HRD+KPH V++ ++ ++L +G+A GQ Y
Sbjct: 141 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRK--LRLIDWGLAEFYHPGQEYNV--- 195
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIWXXXXXXXXXXXXXXPFVGSRDRL 232
R+ + ++ PE++ D Q Y +D+W PF D
Sbjct: 196 -----------RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNY 244
Query: 233 FQSITKGKLHILGC 246
Q + K +LG
Sbjct: 245 DQLVRIAK--VLGT 256
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 19/134 (14%)
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
YM ++L+AL YCH I+HRD+KPH V++ ++ ++L +G+A GQ Y
Sbjct: 136 YMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRK--LRLIDWGLAEFYHPGQEYNV--- 190
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIWXXXXXXXXXXXXXXPFVGSRDRL 232
R+ + ++ PE++ D Q Y +D+W PF D
Sbjct: 191 -----------RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNY 239
Query: 233 FQSITKGKLHILGC 246
Q + K +LG
Sbjct: 240 DQLVRIAK--VLGT 251
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 19/157 (12%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
+EA + +KHP++V+LL + E Y++ E+M ++ + +R V AV
Sbjct: 60 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL-LDYLRECNRQEV--NAVVLL 116
Query: 114 YM-RQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGG 172
YM Q+ A+ Y + + IHRD+ L+ EN VK+ FG++ +L G
Sbjct: 117 YMATQISSAMEYLEKKNFIHRDLAARNCLVG--ENHL-VKVADFGLS-RLMTG------- 165
Query: 173 ERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
D YT AG + + APE + K+ D+W
Sbjct: 166 ---DTYTAPAGAKFPI-KWTAPESLAYNKFSIKSDVW 198
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 76/175 (43%), Gaps = 31/175 (17%)
Query: 50 ADLKREATICHML-KHPHVVELLETYSSEGMLYMVFEYMD--------------GSDICF 94
+DL E + M+ KH +++ LL + +G LY++ EY G + +
Sbjct: 85 SDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY 144
Query: 95 EIVRRATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLG 154
+I R + + V+ Y Q+ + Y IHRD+ VL+ EN+ +K+
Sbjct: 145 DINRVPEEQMTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVT--ENNV-MKIA 199
Query: 155 GFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
FG+A + + +D+Y R+ +MAPE + D+ Y D+W
Sbjct: 200 DFGLARDINN----------IDYYKKTTNGRLPV-KWMAPEALFDRVYTHQSDVW 243
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 17/156 (10%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
+EA + +KHP++V+LL + E Y++ E+M ++ + +R V S V +
Sbjct: 58 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL-LDYLRECNRQEV-SAVVLLY 115
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Q+ A+ Y + + IHRD+ L+ EN VK+ FG++ +L G
Sbjct: 116 MATQISSAMEYLEKKNFIHRDLAARNCLVG--ENHL-VKVADFGLS-RLMTG-------- 163
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
D YT AG + + APE + K+ D+W
Sbjct: 164 --DTYTAHAGAKFPI-KWTAPESLAYNKFSIKSDVW 196
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 17/156 (10%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
+EA + +KHP++V+LL + E Y++ E+M ++ + +R V S V +
Sbjct: 63 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL-LDYLRECNRQEV-SAVVLLY 120
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Q+ A+ Y + + IHRD+ L+ EN VK+ FG++ +L G
Sbjct: 121 MATQISSAMEYLEKKNFIHRDLAARNCLVG--ENHL-VKVADFGLS-RLMTG-------- 168
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
D YT AG + + APE + K+ D+W
Sbjct: 169 --DTYTAHAGAKFPI-KWTAPESLAYNKFSIKSDVW 201
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 76/175 (43%), Gaps = 31/175 (17%)
Query: 50 ADLKREATICHML-KHPHVVELLETYSSEGMLYMVFEYMD--------------GSDICF 94
+DL E + M+ KH +++ LL + +G LY++ EY G + +
Sbjct: 85 SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY 144
Query: 95 EIVRRATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLG 154
+I R + + V+ Y Q+ + Y IHRD+ VL+ EN+ +++
Sbjct: 145 DINRVPEEQMTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVT--ENNV-MRIA 199
Query: 155 GFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
FG+A + + +D+Y R+ +MAPE + D+ Y D+W
Sbjct: 200 DFGLARDINN----------IDYYKKTTNGRLPV-KWMAPEALFDRVYTHQSDVW 243
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 19/157 (12%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
+EA + +KHP++V+LL + E Y++ E+M ++ + +R V AV
Sbjct: 63 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL-LDYLRECNRQEV--NAVVLL 119
Query: 114 YM-RQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGG 172
YM Q+ A+ Y + + IHRD+ L+ EN VK+ FG++ +L G
Sbjct: 120 YMATQISSAMEYLEKKNFIHRDLAARNCLVG--ENHL-VKVADFGLS-RLMTG------- 168
Query: 173 ERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
D YT AG + + APE + K+ D+W
Sbjct: 169 ---DTYTAHAGAKFPI-KWTAPESLAYNKFSIKSDVW 201
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 17/156 (10%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
+EA + +KHP++V+LL + E Y++ E+M ++ + +R V S V +
Sbjct: 58 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL-LDYLRECNRQEV-SAVVLLY 115
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Q+ A+ Y + + IHRD+ L+ EN VK+ FG++ +L G
Sbjct: 116 MATQISSAMEYLEKKNFIHRDLAARNCLVG--ENHL-VKVADFGLS-RLMTG-------- 163
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
D YT AG + + APE + K+ D+W
Sbjct: 164 --DTYTAHAGAKFPI-KWTAPESLAYNKFSIKSDVW 196
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 68/156 (43%), Gaps = 16/156 (10%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E C L P +V L + + E ++G + +++++ E A +Y
Sbjct: 100 ELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSL-GQLIKQMG---CLPEDRALYY 155
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQ-DGQLYCSGGE 173
+ Q LE L Y H I+H D+K VLL++ + A L FG A+ LQ DG
Sbjct: 156 LGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRA--ALCDFGHALCLQPDG-------- 205
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
L + GT +MAPEV+ + VDIW
Sbjct: 206 -LGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIW 240
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 68/156 (43%), Gaps = 16/156 (10%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E C L P +V L + + E ++G + +++++ E A +Y
Sbjct: 114 ELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSL-GQLIKQMG---CLPEDRALYY 169
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQ-DGQLYCSGGE 173
+ Q LE L Y H I+H D+K VLL++ + A L FG A+ LQ DG
Sbjct: 170 LGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRA--ALCDFGHALCLQPDG-------- 219
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
L + GT +MAPEV+ + VDIW
Sbjct: 220 -LGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIW 254
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 19/157 (12%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
+EA + +KHP++V+LL + E Y++ E+M ++ + +R V AV
Sbjct: 58 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL-LDYLRECNRQEV--NAVVLL 114
Query: 114 YM-RQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGG 172
YM Q+ A+ Y + + IHRD+ L+ EN VK+ FG++ +L G
Sbjct: 115 YMATQISSAMEYLEKKNFIHRDLAARNCLVG--ENHL-VKVADFGLS-RLMTG------- 163
Query: 173 ERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
D YT AG + + APE + K+ D+W
Sbjct: 164 ---DTYTAHAGAKFPI-KWTAPESLAYNKFSIKSDVW 196
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 19/157 (12%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
+EA + +KHP++V+LL + E Y++ E+M ++ + +R V AV
Sbjct: 62 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL-LDYLRECNRQEV--NAVVLL 118
Query: 114 YM-RQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGG 172
YM Q+ A+ Y + + IHRD+ L+ EN VK+ FG++ +L G
Sbjct: 119 YMATQISSAMEYLEKKNFIHRDLAARNCLVG--ENHL-VKVADFGLS-RLMTG------- 167
Query: 173 ERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
D YT AG + + APE + K+ D+W
Sbjct: 168 ---DTYTAHAGAKFPI-KWTAPESLAYNKFSIKSDVW 200
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 19/157 (12%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
+EA + +KHP++V+LL + E Y++ E+M ++ + +R V AV
Sbjct: 58 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL-LDYLRECNRQEV--NAVVLL 114
Query: 114 YM-RQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGG 172
YM Q+ A+ Y + + IHRD+ L+ EN VK+ FG++ +L G
Sbjct: 115 YMATQISSAMEYLEKKNFIHRDLAARNCLVG--ENHL-VKVADFGLS-RLMTG------- 163
Query: 173 ERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
D YT AG + + APE + K+ D+W
Sbjct: 164 ---DTYTAHAGAKFPI-KWTAPESLAYNKFSIKSDVW 196
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 19/157 (12%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
+EA + +KHP++V+LL + E Y++ E+M ++ + +R V AV
Sbjct: 71 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL-LDYLRECNRQEV--NAVVLL 127
Query: 114 YM-RQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGG 172
YM Q+ A+ Y + + IHRD+ L+ EN VK+ FG++ +L G
Sbjct: 128 YMATQISSAMEYLEKKNFIHRDLAARNCLVG--ENHL-VKVADFGLS-RLMTG------- 176
Query: 173 ERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
D YT AG + + APE + K+ D+W
Sbjct: 177 ---DTYTAHAGAKFPI-KWTAPESLAYNKFSIKSDVW 209
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 19/157 (12%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
+EA + +KHP++V+LL + E Y++ E+M ++ + +R V AV
Sbjct: 63 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL-LDYLRECNRQEV--NAVVLL 119
Query: 114 YM-RQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGG 172
YM Q+ A+ Y + + IHRD+ L+ EN VK+ FG++ +L G
Sbjct: 120 YMATQISSAMEYLEKKNFIHRDLAARNCLVG--ENHL-VKVADFGLS-RLMTG------- 168
Query: 173 ERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
D YT AG + + APE + K+ D+W
Sbjct: 169 ---DTYTAHAGAKFPI-KWTAPESLAYNKFSIKSDVW 201
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 75/182 (41%), Gaps = 28/182 (15%)
Query: 64 HPHVVELLETY-SSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEAL 122
HP V+ LL+ + + EG + ++ + D+ I + G E + + QV+ A+
Sbjct: 97 HPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLG----EGPSRCFFGQVVAAI 152
Query: 123 RYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKA 182
++CH ++HRDIK +L+ + A KL FG L D + YT
Sbjct: 153 QHCHSRGVVHRDIKDENILIDLRRGCA--KLIDFGSGALLHD-----------EPYTDFD 199
Query: 183 GHRIGTPHYMAPEVIEDQKY-GKPVDIWXXXXXXXXXXXXXXPFVGSRDRLFQSITKGKL 241
G R+ Y PE I +Y P +W PF RD Q I + +L
Sbjct: 200 GTRV----YSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPF--ERD---QEILEAEL 250
Query: 242 HI 243
H
Sbjct: 251 HF 252
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 19/157 (12%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
+EA + +KHP++V+LL + E Y++ E+M ++ + +R V AV
Sbjct: 60 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL-LDYLRECNRQEV--NAVVLL 116
Query: 114 YM-RQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGG 172
YM Q+ A+ Y + + IHRD+ L+ EN VK+ FG++ +L G
Sbjct: 117 YMATQISSAMEYLEKKNFIHRDLAARNCLVG--ENHL-VKVADFGLS-RLMTG------- 165
Query: 173 ERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
D YT AG + + APE + K+ D+W
Sbjct: 166 ---DTYTAHAGAKFPI-KWTAPESLAYNKFSIKSDVW 198
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 77/172 (44%), Gaps = 33/172 (19%)
Query: 52 LKREATICHMLKHPHVVE--------LLETYSSEGMLYMVFEYMDGSDICFEIVRRATAG 103
LKR T C + +V L + + LY+V +Y G D+ + +
Sbjct: 113 LKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDR- 171
Query: 104 FVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL- 162
E +A Y+ +++ A+ H+ +HRDIKP +L+ + + ++L FG ++L
Sbjct: 172 --LPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILM---DMNGHIRLADFGSCLKLM 226
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQ-----KYGKPVDIW 209
+DG T ++ +GTP Y++PE+++ +YG D W
Sbjct: 227 EDG-------------TVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWW 265
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 68/156 (43%), Gaps = 16/156 (10%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E C L P +V L + + E ++G + +++++ E A +Y
Sbjct: 116 ELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSL-GQLIKQMGC---LPEDRALYY 171
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQ-DGQLYCSGGE 173
+ Q LE L Y H I+H D+K VLL++ + A L FG A+ LQ DG
Sbjct: 172 LGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRA--ALCDFGHALCLQPDG-------- 221
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
L + GT +MAPEV+ + VDIW
Sbjct: 222 -LGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIW 256
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 19/157 (12%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
+EA + +KHP++V+LL + E Y++ E+M ++ + +R V AV
Sbjct: 60 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL-LDYLRECNRQEV--NAVVLL 116
Query: 114 YM-RQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGG 172
YM Q+ A+ Y + + IHRD+ L+ EN VK+ FG++ +L G
Sbjct: 117 YMATQISSAMEYLEKKNFIHRDLAARNCLVG--ENHL-VKVADFGLS-RLMTG------- 165
Query: 173 ERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
D YT AG + + APE + K+ D+W
Sbjct: 166 ---DTYTAHAGAKFPI-KWTAPESLAYNKFSIKSDVW 198
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 21/144 (14%)
Query: 67 VVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEALRYCH 126
V+ LL+ + ++ E + F+ + A E +A + QVLEA+R+CH
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA---LQEELARSFFWQVLEAVRHCH 127
Query: 127 ENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRI 186
++HRDIK +L+ N +KL FG L+D YT G R+
Sbjct: 128 NXGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKDTV-----------YTDFDGTRV 174
Query: 187 GTPHYMAPEVIEDQKY-GKPVDIW 209
+P PE I +Y G+ +W
Sbjct: 175 YSP----PEWIRYHRYHGRSAAVW 194
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 84/200 (42%), Gaps = 42/200 (21%)
Query: 22 KMKLHTSAEIEPASFGLPDERLNHYTTEADLKREATICHMLKHPHVVELLETYSSEG--- 78
+ KL S E+ L D+R + RE I L H ++V L + S G
Sbjct: 46 QAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHCNIVRLRYFFYSSGEKK 97
Query: 79 ---MLYMVFEYMDGSDICFEIVR-----RATAGFVYSEAVASHYMRQVLEALRYCHENDI 130
L +V +Y+ + + + R + T +Y + YM Q+ +L Y H I
Sbjct: 98 DEVYLNLVLDYV--PETVYRVARHYSRAKQTLPVIYVKL----YMYQLFRSLAYIHSFGI 151
Query: 131 IHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPH 190
HRDIKP +LL ++A +KL FG A QL G+ S I + +
Sbjct: 152 CHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVS--------------XICSRY 195
Query: 191 YMAPEVI-EDQKYGKPVDIW 209
Y APE+I Y +D+W
Sbjct: 196 YRAPELIFGATDYTSSIDVW 215
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 84/200 (42%), Gaps = 42/200 (21%)
Query: 22 KMKLHTSAEIEPASFGLPDERLNHYTTEADLKREATICHMLKHPHVVELLETYSSEG--- 78
+ KL S E+ L D+R + RE I L H ++V L + S G
Sbjct: 57 QAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHCNIVRLRYFFYSSGEKK 108
Query: 79 ---MLYMVFEYMDGSDICFEIVR-----RATAGFVYSEAVASHYMRQVLEALRYCHENDI 130
L +V +Y+ + + + R + T +Y + YM Q+ +L Y H I
Sbjct: 109 DEVYLNLVLDYV--PETVYRVARHYSRAKQTLPVIYVKL----YMYQLFRSLAYIHSFGI 162
Query: 131 IHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPH 190
HRDIKP +LL ++A +KL FG A QL G+ S I + +
Sbjct: 163 CHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVS--------------XICSRY 206
Query: 191 YMAPEVI-EDQKYGKPVDIW 209
Y APE+I Y +D+W
Sbjct: 207 YRAPELIFGATDYTSSIDVW 226
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 84/200 (42%), Gaps = 42/200 (21%)
Query: 22 KMKLHTSAEIEPASFGLPDERLNHYTTEADLKREATICHMLKHPHVVELLETYSSEG--- 78
+ KL S E+ L D+R + RE I L H ++V L + S G
Sbjct: 38 QAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHCNIVRLRYFFYSSGEKK 89
Query: 79 ---MLYMVFEYMDGSDICFEIVR-----RATAGFVYSEAVASHYMRQVLEALRYCHENDI 130
L +V +Y+ + + + R + T +Y + YM Q+ +L Y H I
Sbjct: 90 DEVYLNLVLDYV--PETVYRVARHYSRAKQTLPVIYVKL----YMYQLFRSLAYIHSFGI 143
Query: 131 IHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPH 190
HRDIKP +LL ++A +KL FG A QL G+ S I + +
Sbjct: 144 CHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVS--------------XICSRY 187
Query: 191 YMAPEVI-EDQKYGKPVDIW 209
Y APE+I Y +D+W
Sbjct: 188 YRAPELIFGATDYTSSIDVW 207
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 84/200 (42%), Gaps = 42/200 (21%)
Query: 22 KMKLHTSAEIEPASFGLPDERLNHYTTEADLKREATICHMLKHPHVVELLETYSSEG--- 78
+ KL S E+ L D+R + RE I L H ++V L + S G
Sbjct: 38 QAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHCNIVRLRYFFYSSGEKK 89
Query: 79 ---MLYMVFEYMDGSDICFEIVR-----RATAGFVYSEAVASHYMRQVLEALRYCHENDI 130
L +V +Y+ + + + R + T +Y + YM Q+ +L Y H I
Sbjct: 90 DVVYLNLVLDYV--PETVYRVARHYSRAKQTLPVIYVKL----YMYQLFRSLAYIHSFGI 143
Query: 131 IHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPH 190
HRDIKP +LL ++A +KL FG A QL G+ S I + +
Sbjct: 144 CHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVS--------------XICSRY 187
Query: 191 YMAPEVI-EDQKYGKPVDIW 209
Y APE+I Y +D+W
Sbjct: 188 YRAPELIFGATDYTSSIDVW 207
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 84/200 (42%), Gaps = 42/200 (21%)
Query: 22 KMKLHTSAEIEPASFGLPDERLNHYTTEADLKREATICHMLKHPHVVELLETYSSEG--- 78
+ KL S E+ L D+R + RE I L H ++V L + S G
Sbjct: 38 QAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHCNIVRLRYFFYSSGEKK 89
Query: 79 ---MLYMVFEYMDGSDICFEIVR-----RATAGFVYSEAVASHYMRQVLEALRYCHENDI 130
L +V +Y+ + + + R + T +Y + YM Q+ +L Y H I
Sbjct: 90 DEVYLNLVLDYV--PETVYRVARHYSRAKQTLPVIYVKL----YMYQLFRSLAYIHSFGI 143
Query: 131 IHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPH 190
HRDIKP +LL ++A +KL FG A QL G+ S I + +
Sbjct: 144 CHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVS--------------XICSRY 187
Query: 191 YMAPEVI-EDQKYGKPVDIW 209
Y APE+I Y +D+W
Sbjct: 188 YRAPELIFGATDYTSSIDVW 207
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 84/200 (42%), Gaps = 42/200 (21%)
Query: 22 KMKLHTSAEIEPASFGLPDERLNHYTTEADLKREATICHMLKHPHVVELLETYSSEG--- 78
+ KL S E+ L D+R + RE I L H ++V L + S G
Sbjct: 50 QAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHCNIVRLRYFFYSSGEKK 101
Query: 79 ---MLYMVFEYMDGSDICFEIVR-----RATAGFVYSEAVASHYMRQVLEALRYCHENDI 130
L +V +Y+ + + + R + T +Y + YM Q+ +L Y H I
Sbjct: 102 DEVYLNLVLDYV--PETVYRVARHYSRAKQTLPVIYVKL----YMYQLFRSLAYIHSFGI 155
Query: 131 IHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPH 190
HRDIKP +LL ++A +KL FG A QL G+ S I + +
Sbjct: 156 CHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVS--------------XICSRY 199
Query: 191 YMAPEVI-EDQKYGKPVDIW 209
Y APE+I Y +D+W
Sbjct: 200 YRAPELIFGATDYTSSIDVW 219
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 84/200 (42%), Gaps = 42/200 (21%)
Query: 22 KMKLHTSAEIEPASFGLPDERLNHYTTEADLKREATICHMLKHPHVVELLETYSSEG--- 78
+ KL S E+ L D+R + RE I L H ++V L + S G
Sbjct: 50 QAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHCNIVRLRYFFYSSGEKK 101
Query: 79 ---MLYMVFEYMDGSDICFEIVR-----RATAGFVYSEAVASHYMRQVLEALRYCHENDI 130
L +V +Y+ + + + R + T +Y + YM Q+ +L Y H I
Sbjct: 102 DEVYLNLVLDYV--PETVYRVARHYSRAKQTLPVIYVKL----YMYQLFRSLAYIHSFGI 155
Query: 131 IHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPH 190
HRDIKP +LL ++A +KL FG A QL G+ S I + +
Sbjct: 156 CHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVS--------------XICSRY 199
Query: 191 YMAPEVI-EDQKYGKPVDIW 209
Y APE+I Y +D+W
Sbjct: 200 YRAPELIFGATDYTSSIDVW 219
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 84/200 (42%), Gaps = 42/200 (21%)
Query: 22 KMKLHTSAEIEPASFGLPDERLNHYTTEADLKREATICHMLKHPHVVELLETYSSEG--- 78
+ KL S E+ L D+R + RE I L H ++V L + S G
Sbjct: 42 QAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHCNIVRLRYFFYSSGEKK 93
Query: 79 ---MLYMVFEYMDGSDICFEIVR-----RATAGFVYSEAVASHYMRQVLEALRYCHENDI 130
L +V +Y+ + + + R + T +Y + YM Q+ +L Y H I
Sbjct: 94 DEVYLNLVLDYV--PETVYRVARHYSRAKQTLPVIYVKL----YMYQLFRSLAYIHSFGI 147
Query: 131 IHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPH 190
HRDIKP +LL ++A +KL FG A QL G+ S I + +
Sbjct: 148 CHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVS--------------XICSRY 191
Query: 191 YMAPEVI-EDQKYGKPVDIW 209
Y APE+I Y +D+W
Sbjct: 192 YRAPELIFGATDYTSSIDVW 211
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 84/200 (42%), Gaps = 42/200 (21%)
Query: 22 KMKLHTSAEIEPASFGLPDERLNHYTTEADLKREATICHMLKHPHVVELLETYSSEG--- 78
+ KL S E+ L D+R + RE I L H ++V L + S G
Sbjct: 39 QAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHCNIVRLRYFFYSSGEKK 90
Query: 79 ---MLYMVFEYMDGSDICFEIVR-----RATAGFVYSEAVASHYMRQVLEALRYCHENDI 130
L +V +Y+ + + + R + T +Y + YM Q+ +L Y H I
Sbjct: 91 DEVYLNLVLDYV--PETVYRVARHYSRAKQTLPVIYVKL----YMYQLFRSLAYIHSFGI 144
Query: 131 IHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPH 190
HRDIKP +LL ++A +KL FG A QL G+ S I + +
Sbjct: 145 CHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVS--------------XICSRY 188
Query: 191 YMAPEVI-EDQKYGKPVDIW 209
Y APE+I Y +D+W
Sbjct: 189 YRAPELIFGATDYTSSIDVW 208
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 21/144 (14%)
Query: 67 VVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEALRYCH 126
V+ LL+ + ++ E + F+ + A E +A + QVLEA+R+CH
Sbjct: 118 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA---LQEELARSFFWQVLEAVRHCH 174
Query: 127 ENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRI 186
++HRDIK +L+ N +KL FG L+D YT G R+
Sbjct: 175 NCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKDTV-----------YTDFDGTRV 221
Query: 187 GTPHYMAPEVIEDQKY-GKPVDIW 209
+P PE I +Y G+ +W
Sbjct: 222 YSP----PEWIRYHRYHGRSAAVW 241
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 84/200 (42%), Gaps = 42/200 (21%)
Query: 22 KMKLHTSAEIEPASFGLPDERLNHYTTEADLKREATICHMLKHPHVVELLETYSSEG--- 78
+ KL S E+ L D+R + RE I L H ++V L + S G
Sbjct: 72 QAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHCNIVRLRYFFYSSGEKK 123
Query: 79 ---MLYMVFEYMDGSDICFEIVR-----RATAGFVYSEAVASHYMRQVLEALRYCHENDI 130
L +V +Y+ + + + R + T +Y + YM Q+ +L Y H I
Sbjct: 124 DEVYLNLVLDYV--PETVYRVARHYSRAKQTLPVIYVKL----YMYQLFRSLAYIHSFGI 177
Query: 131 IHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPH 190
HRDIKP +LL ++A +KL FG A QL G+ S I + +
Sbjct: 178 CHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVS--------------XICSRY 221
Query: 191 YMAPEVI-EDQKYGKPVDIW 209
Y APE+I Y +D+W
Sbjct: 222 YRAPELIFGATDYTSSIDVW 241
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 67/162 (41%), Gaps = 18/162 (11%)
Query: 48 TEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYS 107
+E D EA + L HP +V+L + + +V E+M+ C R G +
Sbjct: 46 SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHG--CLSDYLRTQRGLFAA 103
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQL 167
E + + V E + Y E +IHRD+ L+ EN +K+ FG+ + D
Sbjct: 104 ETLLGMCL-DVCEGMAYLEEACVIHRDLAARNCLVG--ENQV-IKVSDFGMTRFVLD--- 156
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
D YT+ G + + +PEV +Y D+W
Sbjct: 157 --------DQYTSSTGTKFPV-KWASPEVFSFSRYSSKSDVW 189
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 20/133 (15%)
Query: 67 VVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEALRYCH 126
+ +L + E LY+V EY G D+ + + G +A Y+ +++ A+ H
Sbjct: 123 ITQLHFAFQDENYLYLVMEYYVGGDL---LTLLSKFGERIPAEMARFYLAEIVMAIDSVH 179
Query: 127 ENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQ-DGQLYCSGGERLDHYTTKAGHR 185
+HRDIKP +LL + ++L FG ++L+ DG T ++
Sbjct: 180 RLGYVHRDIKPDNILL---DRCGHIRLADFGSCLKLRADG-------------TVRSLVA 223
Query: 186 IGTPHYMAPEVIE 198
+GTP Y++PE+++
Sbjct: 224 VGTPDYLSPEILQ 236
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 73/159 (45%), Gaps = 25/159 (15%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDI-CFEIVRRATAGFVYSEAVAS 112
+EA HPH+V+L+ + E ++++ E ++ F VR+ YS +AS
Sbjct: 88 QEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRK------YSLDLAS 140
Query: 113 H--YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCS 170
Y Q+ AL Y +HRDI VL+++ + VKLG FG++ ++D Y +
Sbjct: 141 LILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDC---VKLGDFGLSRYMEDSTYYKA 197
Query: 171 GGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+L +MAPE I +++ D+W
Sbjct: 198 SKGKLPI------------KWMAPESINFRRFTSASDVW 224
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 21/144 (14%)
Query: 67 VVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEALRYCH 126
V+ LL+ + ++ E + F+ + A E +A + QVLEA+R+CH
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA---LQEELARSFFWQVLEAVRHCH 159
Query: 127 ENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRI 186
++HRDIK +L+ N +KL FG L+D YT G R+
Sbjct: 160 NCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKDTV-----------YTDFDGTRV 206
Query: 187 GTPHYMAPEVIEDQKY-GKPVDIW 209
+P PE I +Y G+ +W
Sbjct: 207 YSP----PEWIRYHRYHGRSAAVW 226
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 77/185 (41%), Gaps = 30/185 (16%)
Query: 54 REATICHMLKHPHVVELL----ETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEA 109
RE + L H ++V+L ET + +L M F GS + ++ + + E+
Sbjct: 56 REFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEF-CPCGS--LYTVLEEPSNAYGLPES 112
Query: 110 VASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPV-KLGGFGVAIQLQDGQLY 168
+R V+ + + EN I+HR+IKP ++ E+ V KL FG A +L+D + +
Sbjct: 113 EFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQF 172
Query: 169 CSGGERLDHYTTKAGHRIGTPHYMAPEVIE--------DQKYGKPVDIWXXXXXXXXXXX 220
S GT Y+ P++ E +KYG VD+W
Sbjct: 173 VS--------------LYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAAT 218
Query: 221 XXXPF 225
PF
Sbjct: 219 GSLPF 223
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 21/132 (15%)
Query: 92 ICFEIVRRATAGFV-------YSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLAN 144
I FE++ + T F+ Y H Q+ ALR+ HEN + H D+KP +L N
Sbjct: 131 IAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVN 190
Query: 145 -------KENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVI 197
E+ + + +I++ D + S +H+TT + T HY PEVI
Sbjct: 191 SEFETLYNEHKSCEEKSVKNTSIRVAD---FGSATFDHEHHTTI----VATRHYRPPEVI 243
Query: 198 EDQKYGKPVDIW 209
+ + +P D+W
Sbjct: 244 LELGWAQPCDVW 255
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 21/144 (14%)
Query: 67 VVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEALRYCH 126
V+ LL+ + ++ E + F+ + A E +A + QVLEA+R+CH
Sbjct: 118 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA---LQEELARSFFWQVLEAVRHCH 174
Query: 127 ENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRI 186
++HRDIK +L+ N +KL FG L+D YT G R+
Sbjct: 175 NCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKDTV-----------YTDFDGTRV 221
Query: 187 GTPHYMAPEVIEDQKY-GKPVDIW 209
+P PE I +Y G+ +W
Sbjct: 222 YSP----PEWIRYHRYHGRSAAVW 241
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 21/132 (15%)
Query: 92 ICFEIVRRATAGFV-------YSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLAN 144
I FE++ + T F+ Y H Q+ ALR+ HEN + H D+KP +L N
Sbjct: 99 IAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVN 158
Query: 145 -------KENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVI 197
E+ + + +I++ D + S +H+TT + T HY PEVI
Sbjct: 159 SEFETLYNEHKSCEEKSVKNTSIRVAD---FGSATFDHEHHTTI----VATRHYRPPEVI 211
Query: 198 EDQKYGKPVDIW 209
+ + +P D+W
Sbjct: 212 LELGWAQPCDVW 223
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 84/200 (42%), Gaps = 42/200 (21%)
Query: 22 KMKLHTSAEIEPASFGLPDERLNHYTTEADLKREATICHMLKHPHVVELLETYSSEG--- 78
+ KL S E+ L D+R + RE I L H ++V L + S G
Sbjct: 43 QAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHCNIVRLRYFFYSSGEKK 94
Query: 79 ---MLYMVFEYMDGSDICFEIVR-----RATAGFVYSEAVASHYMRQVLEALRYCHENDI 130
L +V +Y+ + + + R + T +Y + YM Q+ +L Y H I
Sbjct: 95 DEVYLNLVLDYV--PETVYRVARHYSRAKQTLPVIYVKL----YMYQLFRSLAYIHSFGI 148
Query: 131 IHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPH 190
HRDIKP +LL ++A +KL FG A QL G+ S I + +
Sbjct: 149 CHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVS--------------YICSRY 192
Query: 191 YMAPEVI-EDQKYGKPVDIW 209
Y APE+I Y +D+W
Sbjct: 193 YRAPELIFGATDYTSSIDVW 212
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 84/200 (42%), Gaps = 42/200 (21%)
Query: 22 KMKLHTSAEIEPASFGLPDERLNHYTTEADLKREATICHMLKHPHVVELLETYSSEG--- 78
+ KL S E+ L D+R + RE I L H ++V L + S G
Sbjct: 51 QAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHCNIVRLRYFFYSSGEKK 102
Query: 79 ---MLYMVFEYMDGSDICFEIVR-----RATAGFVYSEAVASHYMRQVLEALRYCHENDI 130
L +V +Y+ + + + R + T +Y + YM Q+ +L Y H I
Sbjct: 103 DEVYLNLVLDYV--PETVYRVARHYSRAKQTLPVIYVKL----YMYQLFRSLAYIHSFGI 156
Query: 131 IHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPH 190
HRDIKP +LL ++A +KL FG A QL G+ S I + +
Sbjct: 157 CHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVS--------------YICSRY 200
Query: 191 YMAPEVI-EDQKYGKPVDIW 209
Y APE+I Y +D+W
Sbjct: 201 YRAPELIFGATDYTSSIDVW 220
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 73/169 (43%), Gaps = 34/169 (20%)
Query: 53 KREATICHMLKHPHVVELLETYSSEG------MLYMVFEYMDGSDICFEIVR-----RAT 101
RE I L H ++V L + S G L +V +Y+ + + + R + T
Sbjct: 61 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPAT--VYRVARHYSRAKQT 118
Query: 102 AGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQ 161
+Y + YM Q+ +L Y H I HRDIKP +LL ++A +KL FG A Q
Sbjct: 119 LPVIYVKL----YMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQ 172
Query: 162 LQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVI-EDQKYGKPVDIW 209
L G+ S I + +Y APE+I Y +D+W
Sbjct: 173 LVRGEPNVS--------------XICSRYYRAPELIFGATDYTSSIDVW 207
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 84/200 (42%), Gaps = 42/200 (21%)
Query: 22 KMKLHTSAEIEPASFGLPDERLNHYTTEADLKREATICHMLKHPHVVELLETYSSEG--- 78
+ KL S E+ L D+R + RE I L H ++V L + S G
Sbjct: 38 QAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHCNIVRLRYFFYSSGEKK 89
Query: 79 ---MLYMVFEYMDGSDICFEIVR-----RATAGFVYSEAVASHYMRQVLEALRYCHENDI 130
L +V +Y+ + + + R + T +Y + YM Q+ +L Y H I
Sbjct: 90 DEVYLNLVLDYV--PETVYRVARHYSRAKQTLPVIYVKL----YMYQLFRSLAYIHSFGI 143
Query: 131 IHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPH 190
HRDIKP +LL ++A +KL FG A QL G+ S I + +
Sbjct: 144 CHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVS--------------YICSRY 187
Query: 191 YMAPEVI-EDQKYGKPVDIW 209
Y APE+I Y +D+W
Sbjct: 188 YRAPELIFGATDYTSSIDVW 207
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 21/144 (14%)
Query: 67 VVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEALRYCH 126
V+ LL+ + ++ E + F+ + A E +A + QVLEA+R+CH
Sbjct: 118 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA---LQEELARSFFWQVLEAVRHCH 174
Query: 127 ENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRI 186
++HRDIK +L+ N +KL FG L+D YT G R+
Sbjct: 175 NCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKDTV-----------YTDFDGTRV 221
Query: 187 GTPHYMAPEVIEDQKY-GKPVDIW 209
+P PE I +Y G+ +W
Sbjct: 222 YSP----PEWIRYHRYHGRSAAVW 241
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 21/144 (14%)
Query: 67 VVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEALRYCH 126
V+ LL+ + ++ E + F+ + A E +A + QVLEA+R+CH
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA---LQEELARSFFWQVLEAVRHCH 160
Query: 127 ENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRI 186
++HRDIK +L+ N +KL FG L+D YT G R+
Sbjct: 161 NCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKDTV-----------YTDFDGTRV 207
Query: 187 GTPHYMAPEVIEDQKY-GKPVDIW 209
+P PE I +Y G+ +W
Sbjct: 208 YSP----PEWIRYHRYHGRSAAVW 227
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 21/144 (14%)
Query: 67 VVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEALRYCH 126
V+ LL+ + ++ E + F+ + A E +A + QVLEA+R+CH
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA---LQEELARSFFWQVLEAVRHCH 160
Query: 127 ENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRI 186
++HRDIK +L+ N +KL FG L+D YT G R+
Sbjct: 161 NCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKDTV-----------YTDFDGTRV 207
Query: 187 GTPHYMAPEVIEDQKY-GKPVDIW 209
+P PE I +Y G+ +W
Sbjct: 208 YSP----PEWIRYHRYHGRSAAVW 227
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 21/144 (14%)
Query: 67 VVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEALRYCH 126
V+ LL+ + ++ E + F+ + A E +A + QVLEA+R+CH
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA---LQEELARSFFWQVLEAVRHCH 159
Query: 127 ENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRI 186
++HRDIK +L+ N +KL FG L+D YT G R+
Sbjct: 160 NCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKDTV-----------YTDFDGTRV 206
Query: 187 GTPHYMAPEVIEDQKY-GKPVDIW 209
+P PE I +Y G+ +W
Sbjct: 207 YSP----PEWIRYHRYHGRSAAVW 226
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 21/144 (14%)
Query: 67 VVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEALRYCH 126
V+ LL+ + ++ E + F+ + A E +A + QVLEA+R+CH
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA---LQEELARSFFWQVLEAVRHCH 160
Query: 127 ENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRI 186
++HRDIK +L+ N +KL FG L+D YT G R+
Sbjct: 161 NCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKDTV-----------YTDFDGTRV 207
Query: 187 GTPHYMAPEVIEDQKY-GKPVDIW 209
+P PE I +Y G+ +W
Sbjct: 208 YSP----PEWIRYHRYHGRSAAVW 227
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 73/159 (45%), Gaps = 25/159 (15%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDI-CFEIVRRATAGFVYSEAVAS 112
+EA HPH+V+L+ + E ++++ E ++ F VR+ YS +AS
Sbjct: 65 QEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRK------YSLDLAS 117
Query: 113 H--YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCS 170
Y Q+ AL Y +HRDI VL+++ + VKLG FG++ ++D Y +
Sbjct: 118 LILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDC---VKLGDFGLSRYMEDSTYYKA 174
Query: 171 GGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+L +MAPE I +++ D+W
Sbjct: 175 SKGKLPI------------KWMAPESINFRRFTSASDVW 201
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 21/132 (15%)
Query: 92 ICFEIVRRATAGFV-------YSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLAN 144
I FE++ + T F+ Y H Q+ ALR+ HEN + H D+KP +L N
Sbjct: 108 IAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVN 167
Query: 145 -------KENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVI 197
E+ + + +I++ D + S +H+TT + T HY PEVI
Sbjct: 168 SEFETLYNEHKSCEEKSVKNTSIRVAD---FGSATFDHEHHTTI----VATRHYRPPEVI 220
Query: 198 EDQKYGKPVDIW 209
+ + +P D+W
Sbjct: 221 LELGWAQPCDVW 232
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 21/144 (14%)
Query: 67 VVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEALRYCH 126
V+ LL+ + ++ E + F+ + A E +A + QVLEA+R+CH
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA---LQEELARSFFWQVLEAVRHCH 159
Query: 127 ENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRI 186
++HRDIK +L+ N +KL FG L+D YT G R+
Sbjct: 160 NCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKDTV-----------YTDFDGTRV 206
Query: 187 GTPHYMAPEVIEDQKY-GKPVDIW 209
+P PE I +Y G+ +W
Sbjct: 207 YSP----PEWIRYHRYHGRSAAVW 226
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 21/144 (14%)
Query: 67 VVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEALRYCH 126
V+ LL+ + ++ E + F+ + A E +A + QVLEA+R+CH
Sbjct: 123 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA---LQEELARSFFWQVLEAVRHCH 179
Query: 127 ENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRI 186
++HRDIK +L+ N +KL FG L+D YT G R+
Sbjct: 180 NCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKDTV-----------YTDFDGTRV 226
Query: 187 GTPHYMAPEVIEDQKY-GKPVDIW 209
+P PE I +Y G+ +W
Sbjct: 227 YSP----PEWIRYHRYHGRSAAVW 246
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 21/144 (14%)
Query: 67 VVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEALRYCH 126
V+ LL+ + ++ E + F+ + A E +A + QVLEA+R+CH
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA---LQEELARSFFWQVLEAVRHCH 159
Query: 127 ENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRI 186
++HRDIK +L+ N +KL FG L+D YT G R+
Sbjct: 160 NCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKDTV-----------YTDFDGTRV 206
Query: 187 GTPHYMAPEVIEDQKY-GKPVDIW 209
+P PE I +Y G+ +W
Sbjct: 207 YSP----PEWIRYHRYHGRSAAVW 226
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 21/144 (14%)
Query: 67 VVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEALRYCH 126
V+ LL+ + ++ E + F+ + A E +A + QVLEA+R+CH
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA---LQEELARSFFWQVLEAVRHCH 160
Query: 127 ENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRI 186
++HRDIK +L+ N +KL FG L+D YT G R+
Sbjct: 161 NCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKDTV-----------YTDFDGTRV 207
Query: 187 GTPHYMAPEVIEDQKY-GKPVDIW 209
+P PE I +Y G+ +W
Sbjct: 208 YSP----PEWIRYHRYHGRSAAVW 227
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 21/144 (14%)
Query: 67 VVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEALRYCH 126
V+ LL+ + ++ E + F+ + A E +A + QVLEA+R+CH
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA---LQEELARSFFWQVLEAVRHCH 127
Query: 127 ENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRI 186
++HRDIK +L+ N +KL FG L+D YT G R+
Sbjct: 128 NCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKDTV-----------YTDFDGTRV 174
Query: 187 GTPHYMAPEVIEDQKY-GKPVDIW 209
+P PE I +Y G+ +W
Sbjct: 175 YSP----PEWIRYHRYHGRSAAVW 194
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 21/144 (14%)
Query: 67 VVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEALRYCH 126
V+ LL+ + ++ E + F+ + A E +A + QVLEA+R+CH
Sbjct: 74 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA---LQEELARSFFWQVLEAVRHCH 130
Query: 127 ENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRI 186
++HRDIK +L+ N +KL FG L+D YT G R+
Sbjct: 131 NCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKDTV-----------YTDFDGTRV 177
Query: 187 GTPHYMAPEVIEDQKY-GKPVDIW 209
+P PE I +Y G+ +W
Sbjct: 178 YSP----PEWIRYHRYHGRSAAVW 197
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 84/200 (42%), Gaps = 42/200 (21%)
Query: 22 KMKLHTSAEIEPASFGLPDERLNHYTTEADLKREATICHMLKHPHVVELLETYSSEG--- 78
+ KL S E+ L D+R + RE I L H ++V L + S G
Sbjct: 72 QAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHCNIVRLRYFFYSSGEKK 123
Query: 79 ---MLYMVFEYMDGSDICFEIVR-----RATAGFVYSEAVASHYMRQVLEALRYCHENDI 130
L +V +Y+ + + + R + T +Y + YM Q+ +L Y H I
Sbjct: 124 DEVYLNLVLDYV--PETVYRVARHYSRAKQTLPVIYVKL----YMYQLFRSLAYIHSFGI 177
Query: 131 IHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPH 190
HRDIKP +LL ++A +KL FG A QL G+ S I + +
Sbjct: 178 CHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVS--------------YICSRY 221
Query: 191 YMAPEVI-EDQKYGKPVDIW 209
Y APE+I Y +D+W
Sbjct: 222 YRAPELIFGATDYTSSIDVW 241
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 84/200 (42%), Gaps = 42/200 (21%)
Query: 22 KMKLHTSAEIEPASFGLPDERLNHYTTEADLKREATICHMLKHPHVVELLETYSSEG--- 78
+ KL S E+ L D+R + RE I L H ++V L + S G
Sbjct: 66 QAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHCNIVRLRYFFYSSGEKK 117
Query: 79 ---MLYMVFEYMDGSDICFEIVR-----RATAGFVYSEAVASHYMRQVLEALRYCHENDI 130
L +V +Y+ + + + R + T +Y + YM Q+ +L Y H I
Sbjct: 118 DEVYLNLVLDYV--PETVYRVARHYSRAKQTLPVIYVKL----YMYQLFRSLAYIHSFGI 171
Query: 131 IHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPH 190
HRDIKP +LL ++A +KL FG A QL G+ S I + +
Sbjct: 172 CHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVS--------------YICSRY 215
Query: 191 YMAPEVI-EDQKYGKPVDIW 209
Y APE+I Y +D+W
Sbjct: 216 YRAPELIFGATDYTSSIDVW 235
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 73/159 (45%), Gaps = 25/159 (15%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDI-CFEIVRRATAGFVYSEAVAS 112
+EA HPH+V+L+ + E ++++ E ++ F VR+ YS +AS
Sbjct: 60 QEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRK------YSLDLAS 112
Query: 113 H--YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCS 170
Y Q+ AL Y +HRDI VL+++ + VKLG FG++ ++D Y +
Sbjct: 113 LILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDC---VKLGDFGLSRYMEDSTYYKA 169
Query: 171 GGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+L +MAPE I +++ D+W
Sbjct: 170 SKGKLPI------------KWMAPESINFRRFTSASDVW 196
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 73/159 (45%), Gaps = 25/159 (15%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDI-CFEIVRRATAGFVYSEAVAS 112
+EA HPH+V+L+ + E ++++ E ++ F VR+ YS +AS
Sbjct: 60 QEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRK------YSLDLAS 112
Query: 113 H--YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCS 170
Y Q+ AL Y +HRDI VL+++ + VKLG FG++ ++D Y +
Sbjct: 113 LILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDC---VKLGDFGLSRYMEDSTYYKA 169
Query: 171 GGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+L +MAPE I +++ D+W
Sbjct: 170 SKGKLPI------------KWMAPESINFRRFTSASDVW 196
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 21/144 (14%)
Query: 67 VVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEALRYCH 126
V+ LL+ + ++ E + F+ + A E +A + QVLEA+R+CH
Sbjct: 90 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA---LQEELARSFFWQVLEAVRHCH 146
Query: 127 ENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRI 186
++HRDIK +L+ N +KL FG L+D YT G R+
Sbjct: 147 NCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKDTV-----------YTDFDGTRV 193
Query: 187 GTPHYMAPEVIEDQKY-GKPVDIW 209
+P PE I +Y G+ +W
Sbjct: 194 YSP----PEWIRYHRYHGRSAAVW 213
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 84/200 (42%), Gaps = 42/200 (21%)
Query: 22 KMKLHTSAEIEPASFGLPDERLNHYTTEADLKREATICHMLKHPHVVELLETYSSEG--- 78
+ KL S E+ L D+R + RE I L H ++V L + S G
Sbjct: 76 QAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHCNIVRLRYFFYSSGEKK 127
Query: 79 ---MLYMVFEYMDGSDICFEIVR-----RATAGFVYSEAVASHYMRQVLEALRYCHENDI 130
L +V +Y+ + + + R + T +Y + YM Q+ +L Y H I
Sbjct: 128 DEVYLNLVLDYV--PETVYRVARHYSRAKQTLPVIYVKL----YMYQLFRSLAYIHSFGI 181
Query: 131 IHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPH 190
HRDIKP +LL ++A +KL FG A QL G+ S I + +
Sbjct: 182 CHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVS--------------YICSRY 225
Query: 191 YMAPEVI-EDQKYGKPVDIW 209
Y APE+I Y +D+W
Sbjct: 226 YRAPELIFGATDYTSSIDVW 245
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 21/157 (13%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDI-CFEIVRRATAGFVYSEAVAS 112
+EA HPH+V+L+ + E ++++ E ++ F VR+ F A
Sbjct: 440 QEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRK----FSLDLASLI 494
Query: 113 HYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGG 172
Y Q+ AL Y +HRDI VL+++ + VKLG FG++ ++D Y +
Sbjct: 495 LYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDC---VKLGDFGLSRYMEDSTYYKASK 551
Query: 173 ERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+L +MAPE I +++ D+W
Sbjct: 552 GKL------------PIKWMAPESINFRRFTSASDVW 576
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 21/144 (14%)
Query: 67 VVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEALRYCH 126
V+ LL+ + ++ E + F+ + A E +A + QVLEA+R+CH
Sbjct: 90 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA---LQEELARSFFWQVLEAVRHCH 146
Query: 127 ENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRI 186
++HRDIK +L+ N +KL FG L+D YT G R+
Sbjct: 147 NCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKDTV-----------YTDFDGTRV 193
Query: 187 GTPHYMAPEVIEDQKY-GKPVDIW 209
+P PE I +Y G+ +W
Sbjct: 194 YSP----PEWIRYHRYHGRSAAVW 213
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 21/144 (14%)
Query: 67 VVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEALRYCH 126
V+ LL+ + ++ E + F+ + A E +A + QVLEA+R+CH
Sbjct: 76 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA---LQEELARSFFWQVLEAVRHCH 132
Query: 127 ENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRI 186
++HRDIK +L+ N +KL FG L+D YT G R+
Sbjct: 133 NCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKDTV-----------YTDFDGTRV 179
Query: 187 GTPHYMAPEVIEDQKY-GKPVDIW 209
+P PE I +Y G+ +W
Sbjct: 180 YSP----PEWIRYHRYHGRSAAVW 199
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 21/144 (14%)
Query: 67 VVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEALRYCH 126
V+ LL+ + ++ E + F+ + A E +A + QVLEA+R+CH
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA---LQEELARSFFWQVLEAVRHCH 147
Query: 127 ENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRI 186
++HRDIK +L+ N +KL FG L+D YT G R+
Sbjct: 148 NCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKDTV-----------YTDFDGTRV 194
Query: 187 GTPHYMAPEVIEDQKY-GKPVDIW 209
+P PE I +Y G+ +W
Sbjct: 195 YSP----PEWIRYHRYHGRSAAVW 214
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 21/144 (14%)
Query: 67 VVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEALRYCH 126
V+ LL+ + ++ E + F+ + A E +A + QVLEA+R+CH
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA---LQEELARSFFWQVLEAVRHCH 127
Query: 127 ENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRI 186
++HRDIK +L+ N +KL FG L+D YT G R+
Sbjct: 128 NCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKDTV-----------YTDFDGTRV 174
Query: 187 GTPHYMAPEVIEDQKY-GKPVDIW 209
+P PE I +Y G+ +W
Sbjct: 175 YSP----PEWIRYHRYHGRSAAVW 194
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 21/144 (14%)
Query: 67 VVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEALRYCH 126
V+ LL+ + ++ E + F+ + A E +A + QVLEA+R+CH
Sbjct: 76 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA---LQEELARSFFWQVLEAVRHCH 132
Query: 127 ENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRI 186
++HRDIK +L+ N +KL FG L+D YT G R+
Sbjct: 133 NCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKDTV-----------YTDFDGTRV 179
Query: 187 GTPHYMAPEVIEDQKY-GKPVDIW 209
+P PE I +Y G+ +W
Sbjct: 180 YSP----PEWIRYHRYHGRSAAVW 199
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 21/144 (14%)
Query: 67 VVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEALRYCH 126
V+ LL+ + ++ E + F+ + A E +A + QVLEA+R+CH
Sbjct: 76 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA---LQEELARSFFWQVLEAVRHCH 132
Query: 127 ENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRI 186
++HRDIK +L+ N +KL FG L+D YT G R+
Sbjct: 133 NCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKDTV-----------YTDFDGTRV 179
Query: 187 GTPHYMAPEVIEDQKY-GKPVDIW 209
+P PE I +Y G+ +W
Sbjct: 180 YSP----PEWIRYHRYHGRSAAVW 199
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 21/144 (14%)
Query: 67 VVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEALRYCH 126
V+ LL+ + ++ E + F+ + A E +A + QVLEA+R+CH
Sbjct: 110 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA---LQEELARSFFWQVLEAVRHCH 166
Query: 127 ENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRI 186
++HRDIK +L+ N +KL FG L+D YT G R+
Sbjct: 167 NCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKDTV-----------YTDFDGTRV 213
Query: 187 GTPHYMAPEVIEDQKY-GKPVDIW 209
+P PE I +Y G+ +W
Sbjct: 214 YSP----PEWIRYHRYHGRSAAVW 233
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 73/159 (45%), Gaps = 25/159 (15%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDI-CFEIVRRATAGFVYSEAVAS 112
+EA HPH+V+L+ + E ++++ E ++ F VR+ YS +AS
Sbjct: 62 QEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRK------YSLDLAS 114
Query: 113 H--YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCS 170
Y Q+ AL Y +HRDI VL+++ + VKLG FG++ ++D Y +
Sbjct: 115 LILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDC---VKLGDFGLSRYMEDSTYYKA 171
Query: 171 GGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+L +MAPE I +++ D+W
Sbjct: 172 SKGKLPI------------KWMAPESINFRRFTSASDVW 198
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 21/144 (14%)
Query: 67 VVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEALRYCH 126
V+ LL+ + ++ E + F+ + A E +A + QVLEA+R+CH
Sbjct: 75 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA---LQEELARSFFWQVLEAVRHCH 131
Query: 127 ENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRI 186
++HRDIK +L+ N +KL FG L+D YT G R+
Sbjct: 132 NCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKDTV-----------YTDFDGTRV 178
Query: 187 GTPHYMAPEVIEDQKY-GKPVDIW 209
+P PE I +Y G+ +W
Sbjct: 179 YSP----PEWIRYHRYHGRSAAVW 198
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 67/156 (42%), Gaps = 16/156 (10%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E C L P +V L + + E ++G + ++V+ E A +Y
Sbjct: 135 ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSL-GQLVKEQG---CLPEDRALYY 190
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQ-DGQLYCSGGE 173
+ Q LE L Y H I+H D+K VLL++ + A L FG A+ LQ DG
Sbjct: 191 LGQALEGLEYLHSRRILHGDVKADNVLLSSDGSHA--ALCDFGHAVCLQPDG-------- 240
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
L + GT +MAPEV+ + VD+W
Sbjct: 241 -LGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVW 275
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 73/159 (45%), Gaps = 25/159 (15%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDI-CFEIVRRATAGFVYSEAVAS 112
+EA HPH+V+L+ + E ++++ E ++ F VR+ YS +AS
Sbjct: 63 QEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRK------YSLDLAS 115
Query: 113 H--YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCS 170
Y Q+ AL Y +HRDI VL+++ + VKLG FG++ ++D Y +
Sbjct: 116 LILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDC---VKLGDFGLSRYMEDSTYYKA 172
Query: 171 GGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+L +MAPE I +++ D+W
Sbjct: 173 SKGKLPI------------KWMAPESINFRRFTSASDVW 199
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 81/198 (40%), Gaps = 33/198 (16%)
Query: 31 IEPASFGLPDE--------RLNHYTTEADLKRE-----ATICHMLKHPHVVELLETYSSE 77
+E +FGL E ++ T AD K + H+ +H ++V LL +
Sbjct: 55 VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHG 114
Query: 78 GMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVAS------HYMRQVLEALRYCHENDII 131
G + ++ EY D+ + R+A A + H+ QV + + + + I
Sbjct: 115 GPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCI 174
Query: 132 HRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHY 191
HRD+ VLL N + K+G FG+A + + +Y K R+ +
Sbjct: 175 HRDVAARNVLLTNGHVA---KIGDFGLARDIMND----------SNYIVKGNARLPV-KW 220
Query: 192 MAPEVIEDQKYGKPVDIW 209
MAPE I D Y D+W
Sbjct: 221 MAPESIFDCVYTVQSDVW 238
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 84/200 (42%), Gaps = 42/200 (21%)
Query: 22 KMKLHTSAEIEPASFGLPDERLNHYTTEADLKREATICHMLKHPHVVELLETYSSEG--- 78
+ KL S E+ L D+R + RE I L H ++V L + S G
Sbjct: 74 QAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHCNIVRLRYFFYSSGEKK 125
Query: 79 ---MLYMVFEYMDGSDICFEIVR-----RATAGFVYSEAVASHYMRQVLEALRYCHENDI 130
L +V +Y+ + + + R + T +Y + YM Q+ +L Y H I
Sbjct: 126 DEVYLNLVLDYV--PETVYRVARHYSRAKQTLPVIYVKL----YMYQLFRSLAYIHSFGI 179
Query: 131 IHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPH 190
HRDIKP +LL ++A +KL FG A QL G+ S I + +
Sbjct: 180 CHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVS--------------YICSRY 223
Query: 191 YMAPEVI-EDQKYGKPVDIW 209
Y APE+I Y +D+W
Sbjct: 224 YRAPELIFGATDYTSSIDVW 243
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 21/144 (14%)
Query: 67 VVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEALRYCH 126
V+ LL+ + ++ E + F+ + A E +A + QVLEA+R+CH
Sbjct: 98 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA---LQEELARSFFWQVLEAVRHCH 154
Query: 127 ENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRI 186
++HRDIK +L+ N +KL FG L+D YT G R+
Sbjct: 155 NCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKDTV-----------YTDFDGTRV 201
Query: 187 GTPHYMAPEVIEDQKY-GKPVDIW 209
+P PE I +Y G+ +W
Sbjct: 202 YSP----PEWIRYHRYHGRSAAVW 221
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 21/144 (14%)
Query: 67 VVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEALRYCH 126
V+ LL+ + ++ E + F+ + A E +A + QVLEA+R+CH
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA---LQEELARSFFWQVLEAVRHCH 147
Query: 127 ENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRI 186
++HRDIK +L+ N +KL FG L+D YT G R+
Sbjct: 148 NCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKDTV-----------YTDFDGTRV 194
Query: 187 GTPHYMAPEVIEDQKY-GKPVDIW 209
+P PE I +Y G+ +W
Sbjct: 195 YSP----PEWIRYHRYHGRSAAVW 214
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 63/144 (43%), Gaps = 21/144 (14%)
Query: 67 VVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEALRYCH 126
V+ LL+ + ++ E + F+ + A E +A + QVLEA+R+CH
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA---LQEELARSFFWQVLEAVRHCH 147
Query: 127 ENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRI 186
++HRDIK +L+ N +KL FG L+D YT G R+
Sbjct: 148 NCGVLHRDIKDENILI--DLNRGELKLIDFGSGALLKDTV-----------YTDFDGTRV 194
Query: 187 GTPHYMAPEVIEDQKY-GKPVDIW 209
+P PE I +Y G+ +W
Sbjct: 195 YSP----PEWIRYHRYHGRSAAVW 214
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 73/156 (46%), Gaps = 17/156 (10%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
+EA + +KHP++V+LL + E Y++ E+M ++ + +R V S V +
Sbjct: 56 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL-LDYLRECNRQEV-SAVVLLY 113
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Q+ A+ Y + + IHRD+ L+ EN VK+ FG++ +L G
Sbjct: 114 MATQISSAMEYLEKKNFIHRDLAARNCLVG--ENHL-VKVADFGLS-RLMTG-------- 161
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
D +T AG + + APE + K+ D+W
Sbjct: 162 --DTFTAHAGAKFPI-KWTAPESLAYNKFSIKSDVW 194
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 75/175 (42%), Gaps = 31/175 (17%)
Query: 50 ADLKREATICHML-KHPHVVELLETYSSEGMLYMVFEYMD--------------GSDICF 94
+DL E + M+ KH +++ LL + +G LY++ Y G + +
Sbjct: 85 SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSY 144
Query: 95 EIVRRATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLG 154
+I R + + V+ Y Q+ + Y IHRD+ VL+ EN+ +K+
Sbjct: 145 DINRVPEEQMTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVT--ENNV-MKIA 199
Query: 155 GFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
FG+A + + +D+Y R+ +MAPE + D+ Y D+W
Sbjct: 200 DFGLARDINN----------IDYYKKTTNGRLPV-KWMAPEALFDRVYTHQSDVW 243
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 84/200 (42%), Gaps = 42/200 (21%)
Query: 22 KMKLHTSAEIEPASFGLPDERLNHYTTEADLKREATICHMLKHPHVVELLETYSSEG--- 78
+ KL S E+ L D+R + RE I L H ++V L + S G
Sbjct: 117 QAKLCDSGELVAIKKVLQDKRFKN--------RELQIMRKLDHCNIVRLRYFFYSSGEKK 168
Query: 79 ---MLYMVFEYMDGSDICFEIVR-----RATAGFVYSEAVASHYMRQVLEALRYCHENDI 130
L +V +Y+ + + + R + T +Y + YM Q+ +L Y H I
Sbjct: 169 DEVYLNLVLDYV--PETVYRVARHYSRAKQTLPVIYVKL----YMYQLFRSLAYIHSFGI 222
Query: 131 IHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPH 190
HRDIKP +LL ++A +KL FG A QL G+ S I + +
Sbjct: 223 CHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVS--------------YICSRY 266
Query: 191 YMAPEVI-EDQKYGKPVDIW 209
Y APE+I Y +D+W
Sbjct: 267 YRAPELIFGATDYTSSIDVW 286
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 50.8 bits (120), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 73/159 (45%), Gaps = 25/159 (15%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDI-CFEIVRRATAGFVYSEAVAS 112
+EA HPH+V+L+ + E ++++ E ++ F VR+ YS +AS
Sbjct: 57 QEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRK------YSLDLAS 109
Query: 113 H--YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCS 170
Y Q+ AL Y +HRDI VL+++ + VKLG FG++ ++D Y +
Sbjct: 110 LILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDC---VKLGDFGLSRYMEDSTYYKA 166
Query: 171 GGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+L +MAPE I +++ D+W
Sbjct: 167 SKGKLPI------------KWMAPESINFRRFTSASDVW 193
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 81/198 (40%), Gaps = 33/198 (16%)
Query: 31 IEPASFGLPDE--------RLNHYTTEADLKRE-----ATICHMLKHPHVVELLETYSSE 77
+E +FGL E ++ T AD K + H+ +H ++V LL +
Sbjct: 63 VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHG 122
Query: 78 GMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVAS------HYMRQVLEALRYCHENDII 131
G + ++ EY D+ + R+A A + H+ QV + + + + I
Sbjct: 123 GPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCI 182
Query: 132 HRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHY 191
HRD+ VLL N + K+G FG+A + + +Y K R+ +
Sbjct: 183 HRDVAARNVLLTNGHVA---KIGDFGLARDIMND----------SNYIVKGNARLPV-KW 228
Query: 192 MAPEVIEDQKYGKPVDIW 209
MAPE I D Y D+W
Sbjct: 229 MAPESIFDCVYTVQSDVW 246
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 81/191 (42%), Gaps = 29/191 (15%)
Query: 25 LHTSAEIEPASFGLPDERLNHYTTEADLKREATICHMLKHPHVVELLETYSS----EGML 80
L T +E A L D +L + K EA L+HP++V +++ S + +
Sbjct: 46 LDTETTVEVAWCELQDRKLTK-SERQRFKEEAEXLKGLQHPNIVRFYDSWESTVKGKKCI 104
Query: 81 YMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEALRYCHEND--IIHRDIKPH 138
+V E + + R V V + RQ+L+ L++ H IIHRD+K
Sbjct: 105 VLVTELXTSGTLKTYLKRFK----VXKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCD 160
Query: 139 CVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIE 198
+ + S VK+G G+A L+ A IGTP + APE E
Sbjct: 161 NIFITGPTGS--VKIGDLGLAT-LKRASF--------------AKAVIGTPEFXAPEXYE 203
Query: 199 DQKYGKPVDIW 209
+KY + VD++
Sbjct: 204 -EKYDESVDVY 213
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 73/157 (46%), Gaps = 19/157 (12%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
+EA + +KHP++V+LL + E Y+V EYM ++ + +R V AV
Sbjct: 77 KEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNL-LDYLRECNREEV--TAVVLL 133
Query: 114 YM-RQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGG 172
YM Q+ A+ Y + + IHRD+ L+ EN VK+ FG++ +L G
Sbjct: 134 YMATQISSAMEYLEKKNFIHRDLAARNCLVG--ENHV-VKVADFGLS-RLMTG------- 182
Query: 173 ERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
D YT AG + + APE + + D+W
Sbjct: 183 ---DTYTAHAGAKFPI-KWTAPESLAYNTFSIKSDVW 215
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Query: 109 AVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLY 168
V H Q+ EA+ + H ++HRD+KP + + VK+G FG+ + +
Sbjct: 164 GVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDV---VKVGDFGLVTAMDQDEEE 220
Query: 169 CSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+ + Y T G ++GT YM+PE I Y VDI+
Sbjct: 221 QTVLTPMPAYATHXG-QVGTKLYMSPEQIHGNNYSHKVDIF 260
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 73/156 (46%), Gaps = 17/156 (10%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
+EA + +KHP++V+LL + E Y++ E+M ++ + +R V S V +
Sbjct: 265 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL-LDYLRECNRQEV-SAVVLLY 322
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Q+ A+ Y + + IHR++ L+ EN VK+ FG++ +L G
Sbjct: 323 MATQISSAMEYLEKKNFIHRNLAARNCLVG--ENHL-VKVADFGLS-RLMTG-------- 370
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
D YT AG + + APE + K+ D+W
Sbjct: 371 --DTYTAHAGAKFPI-KWTAPESLAYNKFSIKSDVW 403
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 83/202 (41%), Gaps = 37/202 (18%)
Query: 31 IEPASFGLPDE--------RLNHYTTEADLKRE-----ATICHMLKHPHVVELLETYSSE 77
+E +FGL E ++ T AD K + H+ +H ++V LL +
Sbjct: 63 VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHG 122
Query: 78 GMLYMVFEYMDGSDICFEIVRRATA-----GFVYSEAVAS-----HYMRQVLEALRYCHE 127
G + ++ EY D+ + R++ F + + S H+ QV + + +
Sbjct: 123 GPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLAS 182
Query: 128 NDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIG 187
+ IHRD+ VLL N + K+G FG+A + + +Y K R+
Sbjct: 183 KNCIHRDVAARNVLLTNGHVA---KIGDFGLARDIMND----------SNYIVKGNARLP 229
Query: 188 TPHYMAPEVIEDQKYGKPVDIW 209
+MAPE I D Y D+W
Sbjct: 230 V-KWMAPESIFDCVYTVQSDVW 250
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 73/168 (43%), Gaps = 34/168 (20%)
Query: 54 REATICHMLKHPHVVELLETYSSEG------MLYMVFEYMDGSDICFEIVR-----RATA 102
RE I L H ++V L + S G L +V +Y+ + + + R + T
Sbjct: 62 RELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV--PETVYRVARHYSRAKQTL 119
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
+Y + YM Q+ +L Y H I HRDIKP +LL ++A +KL FG A QL
Sbjct: 120 PVIYVKL----YMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQL 173
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVI-EDQKYGKPVDIW 209
G+ S I + +Y APE+I Y +D+W
Sbjct: 174 VRGEPNVS--------------YICSRYYRAPELIFGATDYTSSIDVW 207
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 73/169 (43%), Gaps = 34/169 (20%)
Query: 53 KREATICHMLKHPHVVELLETYSSEG------MLYMVFEYMDGSDICFEIVR-----RAT 101
RE I L H ++V L + S G L +V +Y+ + + + R + T
Sbjct: 61 NRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYV--PETVYRVARHYSRAKQT 118
Query: 102 AGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQ 161
+Y + YM Q+ +L Y H I HRDIKP +LL ++A +KL FG A Q
Sbjct: 119 LPVIYVKL----YMYQLFRSLAYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQ 172
Query: 162 LQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVI-EDQKYGKPVDIW 209
L G+ S I + +Y APE+I Y +D+W
Sbjct: 173 LVRGEPNVS--------------YICSRYYRAPELIFGATDYTSSIDVW 207
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 75/175 (42%), Gaps = 31/175 (17%)
Query: 50 ADLKREATICHML-KHPHVVELLETYSSEGMLYMVFEYMD--------------GSDICF 94
+DL E + M+ KH +++ LL + +G LY++ Y G + +
Sbjct: 85 SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSY 144
Query: 95 EIVRRATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLG 154
+I R + + V+ Y Q+ + Y IHRD+ VL+ EN+ +K+
Sbjct: 145 DINRVPEEQMTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVT--ENNV-MKIA 199
Query: 155 GFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
FG+A + + +D+Y R+ +MAPE + D+ Y D+W
Sbjct: 200 DFGLARDINN----------IDYYKKTTNGRLPV-KWMAPEALFDRVYTHQSDVW 243
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDG-QLYCSGGE 173
RQ+LEAL Y H IIHR++KP + + N VK+G FG+A + + +
Sbjct: 122 FRQILEALSYIHSQGIIHRNLKPXNIFIDESRN---VKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIE 198
L + IGT Y+A EV++
Sbjct: 179 NLPGSSDNLTSAIGTAXYVATEVLD 203
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 19/157 (12%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
+EA + +KHP++V+LL + E Y++ E+M ++ + +R V AV
Sbjct: 262 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL-LDYLRECNRQEV--NAVVLL 318
Query: 114 YM-RQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGG 172
YM Q+ A+ Y + + IHR++ L+ EN VK+ FG++ +L G
Sbjct: 319 YMATQISSAMEYLEKKNFIHRNLAARNCLVG--ENHL-VKVADFGLS-RLMTG------- 367
Query: 173 ERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
D YT AG + + APE + K+ D+W
Sbjct: 368 ---DTYTAHAGAKFPI-KWTAPESLAYNKFSIKSDVW 400
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 71/155 (45%), Gaps = 19/155 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
EA I L HPH+V+L+ E +++ E ++ + R + V + + Y
Sbjct: 75 EAVIMKNLDHPHIVKLIGIIEEEPT-WIIMELYPYGELGHYLERNKNSLKVLTLVL---Y 130
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
Q+ +A+ Y + +HRDI +L+A+ E VKLG FG++ ++D Y + R
Sbjct: 131 SLQICKAMAYLESINCVHRDIAVRNILVASPEC---VKLGDFGLSRYIEDEDYYKASVTR 187
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
L +M+PE I +++ D+W
Sbjct: 188 L------------PIKWMSPESINFRRFTTASDVW 210
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 19/157 (12%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
+EA + +KHP++V+LL + E Y++ E+M ++ + +R V AV
Sbjct: 304 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL-LDYLRECNRQEV--NAVVLL 360
Query: 114 YM-RQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGG 172
YM Q+ A+ Y + + IHR++ L+ EN VK+ FG++ +L G
Sbjct: 361 YMATQISSAMEYLEKKNFIHRNLAARNCLVG--ENHL-VKVADFGLS-RLMTG------- 409
Query: 173 ERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
D YT AG + + APE + K+ D+W
Sbjct: 410 ---DTYTAHAGAKFPI-KWTAPESLAYNKFSIKSDVW 442
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 90/195 (46%), Gaps = 23/195 (11%)
Query: 52 LKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVA 111
K E + +H +++ L YS++ L +V ++ +GS + + + + F + +
Sbjct: 67 FKNEVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSL-YHHLHASETKFEMKKLI- 123
Query: 112 SHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSG 171
RQ + Y H IIHRD+K + + L +++N+ VK+G FG+A + + SG
Sbjct: 124 -DIARQTARGMDYLHAKSIIHRDLKSNNIFL-HEDNT--VKIGDFGLATE----KSRWSG 175
Query: 172 GERLDHYTTKAGHRIGTPHYMAPEVIEDQK---YGKPVDIWXXXXXXXXXXXXXXPF--V 226
+ + + G+ +MAPEVI Q Y D++ P+ +
Sbjct: 176 SHQFEQLS-------GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNI 228
Query: 227 GSRDRLFQSITKGKL 241
+RD++ + + +G L
Sbjct: 229 NNRDQIIEMVGRGSL 243
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 71/155 (45%), Gaps = 19/155 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
EA I L HPH+V+L+ E +++ E ++ + R + V + + Y
Sbjct: 59 EAVIMKNLDHPHIVKLIGIIEEEPT-WIIMELYPYGELGHYLERNKNSLKVLTLVL---Y 114
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
Q+ +A+ Y + +HRDI +L+A+ E VKLG FG++ ++D Y + R
Sbjct: 115 SLQICKAMAYLESINCVHRDIAVRNILVASPEC---VKLGDFGLSRYIEDEDYYKASVTR 171
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
L +M+PE I +++ D+W
Sbjct: 172 L------------PIKWMSPESINFRRFTTASDVW 194
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 67/156 (42%), Gaps = 16/156 (10%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
E C L P +V L + + E ++G + ++V+ E A +Y
Sbjct: 116 ELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSL-GQLVKEQG---CLPEDRALYY 171
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQ-DGQLYCSGGE 173
+ Q LE L Y H I+H D+K VLL++ + A L FG A+ LQ DG
Sbjct: 172 LGQALEGLEYLHSRRILHGDVKADNVLLSSDGSHA--ALCDFGHAVCLQPDG-------- 221
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
L + GT +MAPEV+ + VD+W
Sbjct: 222 -LGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVW 256
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 72/156 (46%), Gaps = 17/156 (10%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
+EA + +KHP++V+LL + E Y++ E+M ++ + +R V S V +
Sbjct: 56 KEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNL-LDYLRECNRQEV-SAVVLLY 113
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Q+ A+ Y + + IHRD+ L+ EN VK+ FG++ +L G
Sbjct: 114 MATQISSAMEYLEKKNFIHRDLAARNCLVG--ENHL-VKVADFGLS-RLMTG-------- 161
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
D T AG + + APE + K+ D+W
Sbjct: 162 --DTXTAHAGAKFPI-KWTAPESLAYNKFSIKSDVW 194
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 71/155 (45%), Gaps = 19/155 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
EA I L HPH+V+L+ E +++ E ++ + R + V + + Y
Sbjct: 63 EAVIMKNLDHPHIVKLIGIIEEEPT-WIIMELYPYGELGHYLERNKNSLKVLTLVL---Y 118
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
Q+ +A+ Y + +HRDI +L+A+ E VKLG FG++ ++D Y + R
Sbjct: 119 SLQICKAMAYLESINCVHRDIAVRNILVASPEC---VKLGDFGLSRYIEDEDYYKASVTR 175
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
L +M+PE I +++ D+W
Sbjct: 176 L------------PIKWMSPESINFRRFTTASDVW 198
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 69/157 (43%), Gaps = 21/157 (13%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDI-CFEIVRRATAGFVYSEAVAS 112
+EA HPH+V+L+ + E ++++ E ++ F VR+ F A
Sbjct: 440 QEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRK----FSLDLASLI 494
Query: 113 HYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGG 172
Y Q+ AL Y +HRDI VL++ + VKLG FG++ ++D Y +
Sbjct: 495 LYAYQLSTALAYLESKRFVHRDIAARNVLVSATDC---VKLGDFGLSRYMEDSTYYKASK 551
Query: 173 ERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+L +MAPE I +++ D+W
Sbjct: 552 GKL------------PIKWMAPESINFRRFTSASDVW 576
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 69/157 (43%), Gaps = 21/157 (13%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDI-CFEIVRRATAGFVYSEAVAS 112
+EA HPH+V+L+ + E ++++ E ++ F VR+ F A
Sbjct: 60 QEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRK----FSLDLASLI 114
Query: 113 HYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGG 172
Y Q+ AL Y +HRDI VL++ + VKLG FG++ ++D Y +
Sbjct: 115 LYAYQLSTALAYLESKRFVHRDIAARNVLVSATDC---VKLGDFGLSRYMEDSTYYKASK 171
Query: 173 ERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+L +MAPE I +++ D+W
Sbjct: 172 GKLPI------------KWMAPESINFRRFTSASDVW 196
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 79/168 (47%), Gaps = 21/168 (12%)
Query: 54 REATICHMLK-HPHVVELLETYSSEGM--LYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
RE I L H ++V LL ++ +Y+VF+YM+ ++R V+ + V
Sbjct: 57 REIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYMETD--LHAVIRANILEPVHKQYV 114
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFG-----VAIQLQDG 165
+ Q+++ ++Y H ++HRD+KP +LL N E VK+ FG V I+
Sbjct: 115 ----VYQLIKVIKYLHSGGLLHRDMKPSNILL-NAE--CHVKVADFGLSRSFVNIRRVTN 167
Query: 166 QLYCSGGERLDHYTTKA---GHRIGTPHYMAPEV-IEDQKYGKPVDIW 209
+ S E +++ + T Y APE+ + KY K +D+W
Sbjct: 168 NIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMW 215
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 19/157 (12%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
+EA + +KHP++V+LL + E Y++ E+M ++ + +R V AV
Sbjct: 59 KEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNL-LDYLRECNRQEV--NAVVLL 115
Query: 114 YM-RQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGG 172
YM Q+ A+ Y + + IHRD+ L+ EN VK+ FG++ +L G
Sbjct: 116 YMATQISSAMEYLEKKNFIHRDLAARNCLVG--ENHL-VKVADFGLS-RLMTG------- 164
Query: 173 ERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
D T AG + + APE + K+ D+W
Sbjct: 165 ---DTXTAHAGAKFPI-KWTAPESLAYNKFSIKSDVW 197
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 89/195 (45%), Gaps = 23/195 (11%)
Query: 52 LKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVA 111
K E + +H +++ L YS+ L +V ++ +GS + + + + F + +
Sbjct: 67 FKNEVGVLRKTRHVNIL-LFMGYSTAPQLAIVTQWCEGSSL-YHHLHASETKFEMKKLI- 123
Query: 112 SHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSG 171
RQ + Y H IIHRD+K + + L +++N+ VK+G FG+A + + SG
Sbjct: 124 -DIARQTARGMDYLHAKSIIHRDLKSNNIFL-HEDNT--VKIGDFGLATE----KSRWSG 175
Query: 172 GERLDHYTTKAGHRIGTPHYMAPEVIEDQK---YGKPVDIWXXXXXXXXXXXXXXPF--V 226
+ + + G+ +MAPEVI Q Y D++ P+ +
Sbjct: 176 SHQFEQLS-------GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNI 228
Query: 227 GSRDRLFQSITKGKL 241
+RD++ + + +G L
Sbjct: 229 NNRDQIIEMVGRGSL 243
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 76/173 (43%), Gaps = 27/173 (15%)
Query: 50 ADLKREATICHML-KHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYS- 107
+DL E + M+ KH +++ LL + +G LY++ EY ++ + R G YS
Sbjct: 119 SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSY 178
Query: 108 -------EAVASHYM----RQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGF 156
E ++S + QV + Y IHRD+ VL+ E++ +K+ F
Sbjct: 179 NPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT--EDNV-MKIADF 235
Query: 157 GVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
G+A + +D+Y R+ +MAPE + D+ Y D+W
Sbjct: 236 GLARDIH----------HIDYYKKTTNGRLPV-KWMAPEALFDRIYTHQSDVW 277
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 76/173 (43%), Gaps = 27/173 (15%)
Query: 50 ADLKREATICHML-KHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYS- 107
+DL E + M+ KH +++ LL + +G LY++ EY ++ + R G YS
Sbjct: 78 SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSY 137
Query: 108 -------EAVASHYM----RQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGF 156
E ++S + QV + Y IHRD+ VL+ E++ +K+ F
Sbjct: 138 NPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT--EDNV-MKIADF 194
Query: 157 GVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
G+A + +D+Y R+ +MAPE + D+ Y D+W
Sbjct: 195 GLARDIH----------HIDYYKKTTNGRLPV-KWMAPEALFDRIYTHQSDVW 236
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 76/185 (41%), Gaps = 30/185 (16%)
Query: 54 REATICHMLKHPHVVELL----ETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEA 109
RE + L H ++V+L ET + +L M F GS + ++ + + E+
Sbjct: 56 REFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPC-GS--LYTVLEEPSNAYGLPES 112
Query: 110 VASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPV-KLGGFGVAIQLQDGQLY 168
+R V+ + + EN I+HR+IKP ++ E+ V KL FG A +L+D + +
Sbjct: 113 EFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQF 172
Query: 169 CSGGERLDHYTTKAGHRIGTPHYMAPEVIE--------DQKYGKPVDIWXXXXXXXXXXX 220
GT Y+ P++ E +KYG VD+W
Sbjct: 173 VX--------------LYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAAT 218
Query: 221 XXXPF 225
PF
Sbjct: 219 GSLPF 223
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 30/162 (18%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDICFEIVRRATAGFVYS 107
RE + ++ H +++ LL ++ + L Y+V E MD + ++++
Sbjct: 72 RELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMEL-----D 124
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQL 167
S+ + Q+L +++ H IIHRD+KP +++ ++ A +K+ FG+A
Sbjct: 125 HERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVV---KSDATLKILDFGLA-------- 173
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
R + + T +Y APEVI Y + VDIW
Sbjct: 174 ------RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIW 209
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 76/173 (43%), Gaps = 27/173 (15%)
Query: 50 ADLKREATICHML-KHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYS- 107
+DL E + M+ KH +++ LL + +G LY++ EY ++ + R G YS
Sbjct: 67 SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSY 126
Query: 108 -------EAVASHYM----RQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGF 156
E ++S + QV + Y IHRD+ VL+ E++ +K+ F
Sbjct: 127 NPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT--EDNV-MKIADF 183
Query: 157 GVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
G+A + +D+Y R+ +MAPE + D+ Y D+W
Sbjct: 184 GLARDIH----------HIDYYKKTTNGRLPV-KWMAPEALFDRIYTHQSDVW 225
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 74/175 (42%), Gaps = 31/175 (17%)
Query: 50 ADLKREATICHML-KHPHVVELLETYSSEGMLYMVFEYMD--------------GSDICF 94
+DL E + M+ KH +++ LL + +G LY++ EY G + +
Sbjct: 85 SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSY 144
Query: 95 EIVRRATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLG 154
+I R + + V+ Y Q+ + Y IHRD+ VL+ EN+ +K+
Sbjct: 145 DINRVPEEQMTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVT--ENNV-MKIA 199
Query: 155 GFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
FG+A + + +D R+ +MAPE + D+ Y D+W
Sbjct: 200 DFGLARDINN----------IDXXKKTTNGRLPV-KWMAPEALFDRVYTHQSDVW 243
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 76/173 (43%), Gaps = 27/173 (15%)
Query: 50 ADLKREATICHML-KHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYS- 107
+DL E + M+ KH +++ LL + +G LY++ EY ++ + R G YS
Sbjct: 70 SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSY 129
Query: 108 -------EAVASHYM----RQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGF 156
E ++S + QV + Y IHRD+ VL+ E++ +K+ F
Sbjct: 130 NPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT--EDNV-MKIADF 186
Query: 157 GVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
G+A + +D+Y R+ +MAPE + D+ Y D+W
Sbjct: 187 GLARDIH----------HIDYYKKTTNGRLPV-KWMAPEALFDRIYTHQSDVW 228
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 76/173 (43%), Gaps = 27/173 (15%)
Query: 50 ADLKREATICHML-KHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYS- 107
+DL E + M+ KH +++ LL + +G LY++ EY ++ + R G YS
Sbjct: 78 SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSY 137
Query: 108 -------EAVASHYM----RQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGF 156
E ++S + QV + Y IHRD+ VL+ E++ +K+ F
Sbjct: 138 NPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT--EDNV-MKIADF 194
Query: 157 GVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
G+A + +D+Y R+ +MAPE + D+ Y D+W
Sbjct: 195 GLARDIH----------HIDYYKKTTNGRLPV-KWMAPEALFDRIYTHQSDVW 236
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 76/173 (43%), Gaps = 27/173 (15%)
Query: 50 ADLKREATICHML-KHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYS- 107
+DL E + M+ KH +++ LL + +G LY++ EY ++ + R G YS
Sbjct: 71 SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSY 130
Query: 108 -------EAVASHYM----RQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGF 156
E ++S + QV + Y IHRD+ VL+ E++ +K+ F
Sbjct: 131 NPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT--EDNV-MKIADF 187
Query: 157 GVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
G+A + +D+Y R+ +MAPE + D+ Y D+W
Sbjct: 188 GLARDIH----------HIDYYKKTTNGRLPV-KWMAPEALFDRIYTHQSDVW 229
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 72/161 (44%), Gaps = 20/161 (12%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
D EA+I HP+++ L + + +V EYM+ + +R+ A F + V
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD-SFLRKHDAQFTVIQLV 150
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPV-KLGGFGVAIQLQDGQLYC 169
+R + ++Y + +HRD+ +L+ NS V K+ FG+A L+D
Sbjct: 151 G--MLRGIASGMKYLSDMGYVHRDLAARNILI----NSNLVCKVSDFGLARVLED----- 199
Query: 170 SGGERLDHYTTKAGHRIGTP-HYMAPEVIEDQKYGKPVDIW 209
+ YTT+ G P + +PE I +K+ D+W
Sbjct: 200 ---DPEAAYTTRGGK---IPIRWTSPEAIAYRKFTSASDVW 234
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 30/162 (18%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDICFEIVRRATAGFVYS 107
RE + ++ H +++ LL ++ + L Y+V E MD + ++++
Sbjct: 72 RELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMEL-----D 124
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQL 167
S+ + Q+L +++ H IIHRD+KP +++ ++ A +K+ FG+A
Sbjct: 125 HERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVV---KSDATLKILDFGLA-------- 173
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
R + + T +Y APEVI Y + VDIW
Sbjct: 174 ------RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIW 209
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 30/162 (18%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDICFEIVRRATAGFVYS 107
RE + ++ H +++ LL ++ + L Y+V E MD + ++++
Sbjct: 72 RELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMEL-----D 124
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQL 167
S+ + Q+L +++ H IIHRD+KP +++ ++ A +K+ FG+A
Sbjct: 125 HERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVV---KSDATLKILDFGLA-------- 173
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
R + + T +Y APEVI Y + VDIW
Sbjct: 174 ------RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIW 209
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 4/101 (3%)
Query: 109 AVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLY 168
+V H Q+ EA+ + H ++HRD+KP + + VK+G FG+ + +
Sbjct: 118 SVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDV---VKVGDFGLVTAMDQDEEE 174
Query: 169 CSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+ + Y G +GT YM+PE I Y VDI+
Sbjct: 175 QTVLTPMPAYARHTGQ-VGTKLYMSPEQIHGNSYSHKVDIF 214
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 73/168 (43%), Gaps = 42/168 (25%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDI-----CFEIVRRATA 102
RE + +KH +V+ LL+ ++ L Y+V M G+D+ C ++
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQ 128
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
+Y Q+L L+Y H DIIHRD+KP LA E+ +K+ GFG+A
Sbjct: 129 FLIY----------QILRGLKYIHSADIIHRDLKPSN--LAVNEDCE-LKILGFGLA--- 172
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIW 209
H + + T Y APE++ + Y + VDIW
Sbjct: 173 -------------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 207
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 74/175 (42%), Gaps = 31/175 (17%)
Query: 50 ADLKREATICHML-KHPHVVELLETYSSEGMLYMVFEYMD--------------GSDICF 94
+DL E + M+ KH +++ LL + +G LY++ EY G + +
Sbjct: 85 SDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSY 144
Query: 95 EIVRRATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLG 154
+I R + + V+ Y Q+ + Y IHRD+ VL+ EN+ +K+
Sbjct: 145 DINRVPEEQMTFKDLVSCTY--QLARGMEYLASQKCIHRDLAARNVLVT--ENNV-MKIA 199
Query: 155 GFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
FG+A + + +D R+ +MAPE + D+ Y D+W
Sbjct: 200 DFGLARDINN----------IDXXKKTTNGRLPV-KWMAPEALFDRVYTHQSDVW 243
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 72/156 (46%), Gaps = 17/156 (10%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
+EA + +KHP++V+LL + E Y++ E+M ++ + +R V S V +
Sbjct: 56 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL-LDYLRECNRQEV-SAVVLLY 113
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Q+ A+ Y + + IHRD+ L+ EN VK+ FG++ +L G
Sbjct: 114 MATQISSAMEYLEKKNFIHRDLAARNCLVG--ENHL-VKVADFGLS-RLMTG-------- 161
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
D T AG + + APE + K+ D+W
Sbjct: 162 --DTXTAHAGAKFPI-KWTAPESLAYNKFSIKSDVW 194
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 79/164 (48%), Gaps = 22/164 (13%)
Query: 54 REATICHMLKHPHVVELL-----ETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSE 108
RE I KH +++ + +++ + +Y++ E M + R + + S+
Sbjct: 58 REIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTD------LHRVISTQMLSD 111
Query: 109 AVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLY 168
+++ Q L A++ H +++IHRD+KP +L+ ++ +K+ FG+A + +
Sbjct: 112 DHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLI---NSNCDLKVCDFGLARIIDE---- 164
Query: 169 CSGGERLDHYTTKAG--HRIGTPHYMAPEV-IEDQKYGKPVDIW 209
S + + ++G + T Y APEV + KY + +D+W
Sbjct: 165 -SAADNSEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVW 207
Score = 28.1 bits (61), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 11/61 (18%)
Query: 1 MLSVDPNKRITIHEVINHKWLKMKLHTSAEIE----PASFGLPDERLNHYT---TEADLK 53
ML DP KRIT E + H +L+ + E E P SF +HY T DLK
Sbjct: 289 MLVFDPAKRITAKEALEHPYLQTYHDPNDEPEGEPIPPSFF----EFDHYKEALTTKDLK 344
Query: 54 R 54
+
Sbjct: 345 K 345
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 72/162 (44%), Gaps = 30/162 (18%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDICFEIVRRATAGFVYS 107
RE + + H +++ LL ++ + L Y+V E MD + ++++
Sbjct: 72 RELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LXQVIQMEL-----D 124
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQL 167
S+ + Q+L +++ H IIHRD+KP +++ ++ +K+ FG+A
Sbjct: 125 HERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVV---KSDXTLKILDFGLA-------- 173
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
R + + T +Y APEVI Y + VDIW
Sbjct: 174 ------RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIW 209
Score = 28.5 bits (62), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 1 MLSVDPNKRITIHEVINHKWLKMKLHTSAEIEPASFGLPDERLN 44
ML +DP KRI++ + + H ++ + + AE+E + D++L+
Sbjct: 301 MLVIDPAKRISVDDALQHPYINV-WYDPAEVEAPPPQIYDKQLD 343
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 78/163 (47%), Gaps = 32/163 (19%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDICFEIVRRATAGFVYS 107
RE + ++H +V+ LL+ ++ + L Y+V +M G+D+ ++++ G
Sbjct: 73 RELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLG-KLMKHEKLG---- 126
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQL 167
E + Q+L+ LRY H IIHRD+KP LA E+ +K+ FG+A Q
Sbjct: 127 EDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGN--LAVNEDCE-LKILDFGLARQAD---- 179
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIW 209
++ + T Y APEVI + +Y + VDIW
Sbjct: 180 ------------SEMXGXVVTRWYRAPEVILNWMRYTQTVDIW 210
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 78/167 (46%), Gaps = 40/167 (23%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDICFEIVRRATAGFVYS 107
RE + LKH +V+ LL+ ++ + Y+V M G+D+ V S
Sbjct: 76 RELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM-GADLN---------NIVKS 125
Query: 108 EAVASHYMR----QVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQ 163
+A++ +++ Q+L L+Y H IIHRD+KP V A E+S +++ FG+A Q
Sbjct: 126 QALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNV--AVNEDSE-LRILDFGLARQ-- 180
Query: 164 DGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIW 209
E + Y + T Y APE++ + Y + VDIW
Sbjct: 181 -------ADEEMTGY-------VATRWYRAPEIMLNWMHYNQTVDIW 213
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 19/157 (12%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
+EA + +KHP++V+LL + E Y++ E+M ++ + +R V AV
Sbjct: 63 KEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL-LDYLRECNRQEV--NAVVLL 119
Query: 114 YM-RQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGG 172
YM Q+ A+ Y + + IHRD+ L+ EN VK+ FG++ +L G
Sbjct: 120 YMATQISSAMEYLEKKNFIHRDLAARNCLVG--ENHL-VKVADFGLS-RLMTG------- 168
Query: 173 ERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
D T AG + + APE + K+ D+W
Sbjct: 169 ---DTXTAHAGAKFPI-KWTAPESLAYNKFSIKSDVW 201
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 30/162 (18%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDICFEIVRRATAGFVYS 107
RE + + H +++ LL ++ + L Y+V E MD +++C ++++
Sbjct: 72 RELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMD-ANLC-QVIQMEL-----D 124
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQL 167
S+ + Q+L +++ H IIHRD+KP +++ ++ +K+ FG+A
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDXTLKILDFGLA-------- 173
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
R + + T +Y APEVI Y + VDIW
Sbjct: 174 ------RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIW 209
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 71/157 (45%), Gaps = 19/157 (12%)
Query: 53 KREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVAS 112
+REA L+ PHVV + + +G LY+ ++G D+ + R+ AVA
Sbjct: 82 QREARTAGRLQEPHVVPIHDFGEIDGQLYVDXRLINGVDLAAXLRRQGP--LAPPRAVA- 138
Query: 113 HYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGG 172
+RQ+ AL H HRD+KP +L++ + + L FG+A D +L
Sbjct: 139 -IVRQIGSALDAAHAAGATHRDVKPENILVSADDFA---YLVDFGIASATTDEKL----- 189
Query: 173 ERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
T+ G+ +GT +Y APE + DI+
Sbjct: 190 -------TQLGNTVGTLYYXAPERFSESHATYRADIY 219
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 72/161 (44%), Gaps = 20/161 (12%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
D EA+I HP+++ L + + +V EYM+ + +R+ A F + V
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD-SFLRKHDAQFTVIQLV 150
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPV-KLGGFGVAIQLQDGQLYC 169
+R + ++Y + +HRD+ +L+ NS V K+ FG++ L+D
Sbjct: 151 G--MLRGIASGMKYLSDMGFVHRDLAARNILI----NSNLVCKVSDFGLSRVLED----- 199
Query: 170 SGGERLDHYTTKAGHRIGTP-HYMAPEVIEDQKYGKPVDIW 209
+ YTT+ G P + +PE I +K+ D+W
Sbjct: 200 ---DPEAAYTTRGGK---IPIRWTSPEAIAYRKFTSASDVW 234
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 73/168 (43%), Gaps = 42/168 (25%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDI-----CFEIVRRATA 102
RE + +KH +V+ LL+ ++ L Y+V M G+D+ C ++
Sbjct: 76 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQ 134
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
+Y Q+L L+Y H DIIHRD+KP LA E+S +K+ FG+A
Sbjct: 135 FLIY----------QILRGLKYIHSADIIHRDLKPSN--LAVNEDSE-LKILDFGLA--- 178
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIW 209
H + + T Y APE++ + Y + VDIW
Sbjct: 179 -------------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 213
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 75/171 (43%), Gaps = 25/171 (14%)
Query: 41 ERLNHYTTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRA 100
ER+N + RE I L+HP++V + + L +V EY+ + + ++ ++
Sbjct: 76 ERVNEFL------REVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSL-YRLLHKS 128
Query: 101 TAGFVYSEAVASHYMRQVLEALRYCHEND--IIHRDIKPHCVLLANKENSAPVKLGGFGV 158
A E V + + Y H + I+HRD+K +L+ K VK+ FG+
Sbjct: 129 GAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYT---VKVCDFGL 185
Query: 159 AIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+ +L+ S GTP +MAPEV+ D+ + D++
Sbjct: 186 S-RLKASXFLXSKXA------------AGTPEWMAPEVLRDEPSNEKSDVY 223
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 73/168 (43%), Gaps = 42/168 (25%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDI-----CFEIVRRATA 102
RE + +KH +V+ LL+ ++ L Y+V M G+D+ C ++
Sbjct: 72 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQ 130
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
+Y Q+L L+Y H DIIHRD+KP LA E+S +K+ FG+A
Sbjct: 131 FLIY----------QILRGLKYIHSADIIHRDLKPSN--LAVNEDSE-LKILDFGLA--- 174
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIW 209
H + + T Y APE++ + Y + VDIW
Sbjct: 175 -------------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 209
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 89/195 (45%), Gaps = 23/195 (11%)
Query: 52 LKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVA 111
K E + +H +++ L YS++ L +V ++ +GS + + + + F + +
Sbjct: 55 FKNEVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSL-YHHLHASETKFEMKKLI- 111
Query: 112 SHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSG 171
RQ + Y H IIHRD+K + + L +++N+ VK+G FG+A + SG
Sbjct: 112 -DIARQTARGMDYLHAKSIIHRDLKSNNIFL-HEDNT--VKIGDFGLATV----KSRWSG 163
Query: 172 GERLDHYTTKAGHRIGTPHYMAPEVIEDQK---YGKPVDIWXXXXXXXXXXXXXXPF--V 226
+ + + G+ +MAPEVI Q Y D++ P+ +
Sbjct: 164 SHQFEQLS-------GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNI 216
Query: 227 GSRDRLFQSITKGKL 241
+RD++ + + +G L
Sbjct: 217 NNRDQIIEMVGRGSL 231
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 73/163 (44%), Gaps = 33/163 (20%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDICFEIVRRATAGFVYS 107
RE + ++H +V+ LL+ ++ L Y+V +M +D+ + G +S
Sbjct: 72 RELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQ-TDL------QKIMGLKFS 124
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQL 167
E + + Q+L+ L+Y H ++HRD+KP LA E+ +K+ FG+A
Sbjct: 125 EEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGN--LAVNEDCE-LKILDFGLA-------- 173
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIW 209
H + + T Y APEVI Y + VDIW
Sbjct: 174 --------RHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIW 208
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 65/144 (45%), Gaps = 21/144 (14%)
Query: 80 LYMVFEYMDGSDICFEIVRRATAGFV-------YSEAVASHYMRQVLEALRYCHENDIIH 132
++ F+Y I FE++ +T F+ Y H Q+ +A+++ H+N + H
Sbjct: 101 MFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPIHQVRHMAFQLCQAVKFLHDNKLTH 160
Query: 133 RDIKPHCVLLANKENSAPVKL-------GGFGVAIQLQDGQLYCSGGERLDHYTTKAGHR 185
D+KP +L N + L A+++ D + S +H++T
Sbjct: 161 TDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVD---FGSATFDHEHHSTI---- 213
Query: 186 IGTPHYMAPEVIEDQKYGKPVDIW 209
+ T HY APEVI + + +P D+W
Sbjct: 214 VSTRHYRAPEVILELGWSQPCDVW 237
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 73/162 (45%), Gaps = 30/162 (18%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDICFEIVRRATAGFVYS 107
RE + + H +++ LL ++ + L Y+V E MD +++C I
Sbjct: 72 RELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVI------HMELD 124
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQL 167
S+ + Q+L +++ H IIHRD+KP +++ ++ +K+ FG+A +
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLA------RT 175
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
C+ + T+ +Y APEVI Y VDIW
Sbjct: 176 ACTNFMMTPYVVTR--------YYRAPEVILGMGYAANVDIW 209
Score = 27.7 bits (60), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 1 MLSVDPNKRITIHEVINHKWLKMKLHTSAEIEPASFGLPDERL 43
ML +DP+KRI++ E + H ++ + + AE E + D +L
Sbjct: 301 MLVIDPDKRISVDEALRHPYITV-WYDPAEAEAPPPQIYDAQL 342
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 75/167 (44%), Gaps = 23/167 (13%)
Query: 44 NHYTTEADLKREATICHMLKHPHVVELLETYSSE-GMLYMVFEYMDGSDICFEIVRRATA 102
N T +A L EA++ L+H ++V+LL E G LY+V EYM + + R +
Sbjct: 39 NDATAQAFLA-EASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS 97
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
V + V EA+ Y N+ +HRD+ VL++ ++N A K+ FG+ +
Sbjct: 98 --VLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVS-EDNVA--KVSDFGLTKEA 152
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
Q G+ +T APE + ++K+ D+W
Sbjct: 153 SSTQ---DTGKLPVKWT-------------APEALREKKFSTKSDVW 183
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 75/164 (45%), Gaps = 18/164 (10%)
Query: 54 REATICHMLKHPHVVELLETYSS--EGMLYMVFEYMDGS---DICFEIVRRATAGFV-YS 107
RE + LKHP+V+ L + + S + ++++F+Y + I F +A V
Sbjct: 67 REIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLP 126
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVL-LANKENSAPVKLGGFGVAIQLQDGQ 166
+ + Q+L+ + Y H N ++HRD+KP +L + VK+ G A +
Sbjct: 127 RGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFA------R 180
Query: 167 LYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
L+ S + L + T Y APE++ + Y K +DIW
Sbjct: 181 LFNSPLKPL----ADLDPVVVTFWYRAPELLLGARHYTKAIDIW 220
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 78/174 (44%), Gaps = 39/174 (22%)
Query: 54 REATICHMLKHPHVVELLETYSSEGM--------------LYMVFEYMDGSDICFEIVRR 99
RE I L H ++V++ E G +Y+V EYM+ ++
Sbjct: 57 REIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMET-----DLANV 111
Query: 100 ATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVA 159
G + E A +M Q+L L+Y H +++HRD+KP L N E+ +K+G FG+A
Sbjct: 112 LEQGPLLEEH-ARLFMYQLLRGLKYIHSANVLHRDLKP-ANLFINTEDLV-LKIGDFGLA 168
Query: 160 IQLQDGQLYCSGGERLDHYTTKAGHR---IGTPHYMAPE-VIEDQKYGKPVDIW 209
++ D HY+ K GH + T Y +P ++ Y K +D+W
Sbjct: 169 -RIMD-----------PHYSHK-GHLSEGLVTKWYRSPRLLLSPNNYTKAIDMW 209
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 79/164 (48%), Gaps = 22/164 (13%)
Query: 54 REATICHMLKHPHVVELL-----ETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSE 108
RE I KH +++ + +++ + +Y++ E M + R + + S+
Sbjct: 58 REIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTD------LHRVISTQMLSD 111
Query: 109 AVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLY 168
+++ Q L A++ H +++IHRD+KP +L+ ++ +K+ FG+A + +
Sbjct: 112 DHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLI---NSNCDLKVCDFGLARIIDE---- 164
Query: 169 CSGGERLDHYTTKAG--HRIGTPHYMAPEV-IEDQKYGKPVDIW 209
S + + ++G + T Y APEV + KY + +D+W
Sbjct: 165 -SAADNSEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVW 207
Score = 28.1 bits (61), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 11/61 (18%)
Query: 1 MLSVDPNKRITIHEVINHKWLKMKLHTSAEIE----PASFGLPDERLNHYT---TEADLK 53
ML DP KRIT E + H +L+ + E E P SF +HY T DLK
Sbjct: 289 MLVFDPAKRITAKEALEHPYLQTYHDPNDEPEGEPIPPSFF----EFDHYKEALTTKDLK 344
Query: 54 R 54
+
Sbjct: 345 K 345
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 75/167 (44%), Gaps = 23/167 (13%)
Query: 44 NHYTTEADLKREATICHMLKHPHVVELLETYSSE-GMLYMVFEYMDGSDICFEIVRRATA 102
N T +A L EA++ L+H ++V+LL E G LY+V EYM + + R +
Sbjct: 54 NDATAQAFLA-EASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS 112
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
V + V EA+ Y N+ +HRD+ VL++ ++N A K+ FG+ +
Sbjct: 113 --VLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVS-EDNVA--KVSDFGLTKEA 167
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
Q G+ +T APE + ++K+ D+W
Sbjct: 168 SSTQ---DTGKLPVKWT-------------APEALREKKFSTKSDVW 198
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 68/157 (43%), Gaps = 21/157 (13%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDI-CFEIVRRATAGFVYSEAVAS 112
+EA HPH+V+L+ + E ++++ E ++ F VR+ F A
Sbjct: 60 QEALTMRQFDHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRK----FSLDLASLI 114
Query: 113 HYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGG 172
Y Q+ AL Y +HRDI VL+++ + VKLG FG++ ++D
Sbjct: 115 LYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDC---VKLGDFGLSRYMEDST------ 165
Query: 173 ERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
KA +MAPE I +++ D+W
Sbjct: 166 ------XXKASKGKLPIKWMAPESINFRRFTSASDVW 196
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 72/162 (44%), Gaps = 30/162 (18%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDICFEIVRRATAGFVYS 107
RE + + H +++ LL ++ + L Y+V E MD + ++++
Sbjct: 72 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LXQVIQMEL-----D 124
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQL 167
S+ + Q+L +++ H IIHRD+KP +++ ++ +K+ FG+A
Sbjct: 125 HERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVV---KSDXTLKILDFGLA-------- 173
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
R + + T +Y APEVI Y + VDIW
Sbjct: 174 ------RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIW 209
Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 1 MLSVDPNKRITIHEVINHKWLKMKLHTSAEIEPASFGLPDERLN 44
ML +DP KRI++ + + H ++ + + AE+E + D++L+
Sbjct: 301 MLVIDPAKRISVDDALQHPYINV-WYDPAEVEAPPPQIYDKQLD 343
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 79/164 (48%), Gaps = 22/164 (13%)
Query: 54 REATICHMLKHPHVVELL-----ETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSE 108
RE I KH +++ + +++ + +Y++ E M + R + + S+
Sbjct: 58 REIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTD------LHRVISTQMLSD 111
Query: 109 AVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLY 168
+++ Q L A++ H +++IHRD+KP +L+ ++ +K+ FG+A + +
Sbjct: 112 DHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLI---NSNCDLKVCDFGLARIIDE---- 164
Query: 169 CSGGERLDHYTTKAG--HRIGTPHYMAPEV-IEDQKYGKPVDIW 209
S + + ++G + T Y APEV + KY + +D+W
Sbjct: 165 -SAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVW 207
Score = 28.1 bits (61), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 11/61 (18%)
Query: 1 MLSVDPNKRITIHEVINHKWLKMKLHTSAEIE----PASFGLPDERLNHYT---TEADLK 53
ML DP KRIT E + H +L+ + E E P SF +HY T DLK
Sbjct: 289 MLVFDPAKRITAKEALEHPYLQTYHDPNDEPEGEPIPPSFF----EFDHYKEALTTKDLK 344
Query: 54 R 54
+
Sbjct: 345 K 345
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 71/174 (40%), Gaps = 32/174 (18%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDI----------CFEIV--- 97
D +REA + L+H H+V+ L MVFEYM D+ +V
Sbjct: 63 DFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQ 122
Query: 98 -RRATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKP-HCVLLANKENSAPVKLGG 155
R+A S+ + H Q+ + Y +HRD+ +C++ AN VK+G
Sbjct: 123 PRQAKGELGLSQML--HIASQIASGMVYLASQHFVHRDLATRNCLVGAN----LLVKIGD 176
Query: 156 FGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
FG++ + Y G GH + +M PE I +K+ D+W
Sbjct: 177 FGMSRDVYSTDYYRVG-----------GHTMLPIRWMPPESIMYRKFTTESDVW 219
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 72/162 (44%), Gaps = 30/162 (18%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDICFEIVRRATAGFVYS 107
RE + + H +++ LL ++ + L Y+V E MD + ++++
Sbjct: 65 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LXQVIQMEL-----D 117
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQL 167
S+ + Q+L +++ H IIHRD+KP +++ ++ +K+ FG+A
Sbjct: 118 HERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVV---KSDXTLKILDFGLA-------- 166
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
R + + T +Y APEVI Y + VDIW
Sbjct: 167 ------RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIW 202
Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 1 MLSVDPNKRITIHEVINHKWLKMKLHTSAEIEPASFGLPDERLN 44
ML +DP KRI++ + + H ++ + + AE+E + D++L+
Sbjct: 294 MLVIDPAKRISVDDALQHPYINV-WYDPAEVEAPPPQIYDKQLD 336
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 30/162 (18%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDICFEIVRRATAGFVYS 107
RE + + H +++ LL ++ + L Y+V E MD +++C ++++
Sbjct: 72 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMD-ANLC-QVIQMEL-----D 124
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQL 167
S+ + Q+L +++ H IIHRD+KP +++ ++ +K+ FG+A
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLA-------- 173
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
R + + T +Y APEVI Y + VDIW
Sbjct: 174 ------RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIW 209
Score = 28.9 bits (63), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 1 MLSVDPNKRITIHEVINHKWLKMKLHTSAEIEPASFGLPDERLN 44
ML +DP KRI++ + + H ++ + + AE+E + D++L+
Sbjct: 301 MLVIDPAKRISVDDALQHPYINV-WYDPAEVEAPPPQIYDKQLD 343
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 30/162 (18%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDICFEIVRRATAGFVYS 107
RE + + H +++ LL ++ + L Y+V E MD +++C ++++
Sbjct: 73 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMD-ANLC-QVIQMEL-----D 125
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQL 167
S+ + Q+L +++ H IIHRD+KP +++ ++ +K+ FG+A
Sbjct: 126 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLA-------- 174
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
R + + T +Y APEVI Y + VDIW
Sbjct: 175 ------RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIW 210
Score = 28.9 bits (63), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 1 MLSVDPNKRITIHEVINHKWLKMKLHTSAEIEPASFGLPDERLN 44
ML +DP KRI++ + + H ++ + + AE+E + D++L+
Sbjct: 302 MLVIDPAKRISVDDALQHPYINV-WYDPAEVEAPPPQIYDKQLD 344
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 74/162 (45%), Gaps = 30/162 (18%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDICFEIVRRATAGFVYS 107
RE + ++ H +++ LL ++ + L Y+V E MD + ++++
Sbjct: 72 RELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMEL-----D 124
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQL 167
S+ + Q+L +++ H IIHRD+KP +++ ++ A +K+ FG+A
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDATLKILDFGLA-------- 173
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
R + + T +Y APEVI Y + VDIW
Sbjct: 174 ------RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIW 209
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 75/167 (44%), Gaps = 23/167 (13%)
Query: 44 NHYTTEADLKREATICHMLKHPHVVELLETYSSE-GMLYMVFEYMDGSDICFEIVRRATA 102
N T +A L EA++ L+H ++V+LL E G LY+V EYM + + R +
Sbjct: 226 NDATAQAFLA-EASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS 284
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
V + V EA+ Y N+ +HRD+ VL++ ++N A K+ FG+ +
Sbjct: 285 --VLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVS-EDNVA--KVSDFGLTKEA 339
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
Q G+ +T APE + ++K+ D+W
Sbjct: 340 SSTQ---DTGKLPVKWT-------------APEALREKKFSTKSDVW 370
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 30/162 (18%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDICFEIVRRATAGFVYS 107
RE + + H +++ LL ++ + L Y+V E MD +++C ++++
Sbjct: 66 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMD-ANLC-QVIQMEL-----D 118
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQL 167
S+ + Q+L +++ H IIHRD+KP +++ ++ +K+ FG+A
Sbjct: 119 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLA-------- 167
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
R + + T +Y APEVI Y + VDIW
Sbjct: 168 ------RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIW 203
Score = 28.9 bits (63), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 1 MLSVDPNKRITIHEVINHKWLKMKLHTSAEIEPASFGLPDERLN 44
ML +DP KRI++ + + H ++ + + AE+E + D++L+
Sbjct: 295 MLVIDPAKRISVDDALQHPYINV-WYDPAEVEAPPPQIYDKQLD 337
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 30/162 (18%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDICFEIVRRATAGFVYS 107
RE + + H +++ LL ++ + L Y+V E MD +++C ++++
Sbjct: 73 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMD-ANLC-QVIQMEL-----D 125
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQL 167
S+ + Q+L +++ H IIHRD+KP +++ ++ +K+ FG+A
Sbjct: 126 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLA-------- 174
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
R + + T +Y APEVI Y + VDIW
Sbjct: 175 ------RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIW 210
Score = 28.9 bits (63), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 1 MLSVDPNKRITIHEVINHKWLKMKLHTSAEIEPASFGLPDERLN 44
ML +DP KRI++ + + H ++ + + AE+E + D++L+
Sbjct: 302 MLVIDPAKRISVDDALQHPYINV-WYDPAEVEAPPPQIYDKQLD 344
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 73/163 (44%), Gaps = 33/163 (20%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDICFEIVRRATAGFVYS 107
RE + ++H +V+ LL+ ++ L Y+V +M +D+ + G +S
Sbjct: 90 RELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQ-TDL------QKIMGMEFS 142
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQL 167
E + + Q+L+ L+Y H ++HRD+KP LA E+ +K+ FG+A
Sbjct: 143 EEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGN--LAVNEDCE-LKILDFGLA-------- 191
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIW 209
H + + T Y APEVI Y + VDIW
Sbjct: 192 --------RHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIW 226
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 30/162 (18%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDICFEIVRRATAGFVYS 107
RE + + H +++ LL ++ + L Y+V E MD +++C ++++
Sbjct: 65 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMD-ANLC-QVIQMEL-----D 117
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQL 167
S+ + Q+L +++ H IIHRD+KP +++ ++ +K+ FG+A
Sbjct: 118 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLA-------- 166
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
R + + T +Y APEVI Y + VDIW
Sbjct: 167 ------RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIW 202
Score = 28.9 bits (63), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 1 MLSVDPNKRITIHEVINHKWLKMKLHTSAEIEPASFGLPDERLN 44
ML +DP KRI++ + + H ++ + + AE+E + D++L+
Sbjct: 294 MLVIDPAKRISVDDALQHPYINV-WYDPAEVEAPPPQIYDKQLD 336
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 30/162 (18%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDICFEIVRRATAGFVYS 107
RE + + H +++ LL ++ + L Y+V E MD +++C ++++
Sbjct: 110 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMD-ANLC-QVIQMEL-----D 162
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQL 167
S+ + Q+L +++ H IIHRD+KP +++ ++ +K+ FG+A
Sbjct: 163 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLA-------- 211
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
R + + T +Y APEVI Y + VDIW
Sbjct: 212 ------RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIW 247
Score = 28.9 bits (63), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 1 MLSVDPNKRITIHEVINHKWLKMKLHTSAEIEPASFGLPDERLN 44
ML +DP KRI++ + + H ++ + + AE+E + D++L+
Sbjct: 339 MLVIDPAKRISVDDALQHPYINV-WYDPAEVEAPPPQIYDKQLD 381
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 30/162 (18%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDICFEIVRRATAGFVYS 107
RE + + H +++ LL ++ + L Y+V E MD +++C ++++
Sbjct: 66 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMD-ANLC-QVIQMEL-----D 118
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQL 167
S+ + Q+L +++ H IIHRD+KP +++ ++ +K+ FG+A
Sbjct: 119 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLA-------- 167
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
R + + T +Y APEVI Y + VDIW
Sbjct: 168 ------RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIW 203
Score = 28.9 bits (63), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 1 MLSVDPNKRITIHEVINHKWLKMKLHTSAEIEPASFGLPDERLN 44
ML +DP KRI++ + + H ++ + + AE+E + D++L+
Sbjct: 295 MLVIDPAKRISVDDALQHPYINV-WYDPAEVEAPPPQIYDKQLD 337
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 30/162 (18%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDICFEIVRRATAGFVYS 107
RE + + H +++ LL ++ + L Y+V E MD +++C ++++
Sbjct: 71 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMD-ANLC-QVIQMEL-----D 123
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQL 167
S+ + Q+L +++ H IIHRD+KP +++ ++ +K+ FG+A
Sbjct: 124 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLA-------- 172
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
R + + T +Y APEVI Y + VDIW
Sbjct: 173 ------RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIW 208
Score = 28.9 bits (63), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 1 MLSVDPNKRITIHEVINHKWLKMKLHTSAEIEPASFGLPDERLN 44
ML +DP KRI++ + + H ++ + + AE+E + D++L+
Sbjct: 300 MLVIDPAKRISVDDALQHPYINV-WYDPAEVEAPPPQIYDKQLD 342
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 30/162 (18%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDICFEIVRRATAGFVYS 107
RE + + H +++ LL ++ + L Y+V E MD +++C ++++
Sbjct: 110 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMD-ANLC-QVIQMEL-----D 162
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQL 167
S+ + Q+L +++ H IIHRD+KP +++ ++ +K+ FG+A
Sbjct: 163 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLA-------- 211
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
R + + T +Y APEVI Y + VDIW
Sbjct: 212 ------RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIW 247
Score = 28.9 bits (63), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 1 MLSVDPNKRITIHEVINHKWLKMKLHTSAEIEPASFGLPDERLN 44
ML +DP KRI++ + + H ++ + + AE+E + D++L+
Sbjct: 339 MLVIDPAKRISVDDALQHPYINV-WYDPAEVEAPPPQIYDKQLD 381
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 75/171 (43%), Gaps = 25/171 (14%)
Query: 41 ERLNHYTTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRA 100
ER+N + RE I L+HP++V + + L +V EY+ + + ++ ++
Sbjct: 76 ERVNEFL------REVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSL-YRLLHKS 128
Query: 101 TAGFVYSEAVASHYMRQVLEALRYCHEND--IIHRDIKPHCVLLANKENSAPVKLGGFGV 158
A E V + + Y H + I+HR++K +L+ K VK+ FG+
Sbjct: 129 GAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYT---VKVCDFGL 185
Query: 159 AIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+ +L+ S GTP +MAPEV+ D+ + D++
Sbjct: 186 S-RLKASTFLSSKSA------------AGTPEWMAPEVLRDEPSNEKSDVY 223
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 30/162 (18%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDICFEIVRRATAGFVYS 107
RE + + H +++ LL ++ + L Y+V E MD +++C ++++
Sbjct: 72 RELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMD-ANLC-QVIQMEL-----D 124
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQL 167
S+ + Q+L +++ H IIHRD+KP +++ ++ +K+ FG+A
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLA-------- 173
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
R + + T +Y APEVI Y + VDIW
Sbjct: 174 ------RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIW 209
Score = 28.9 bits (63), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 1 MLSVDPNKRITIHEVINHKWLKMKLHTSAEIEPASFGLPDERLN 44
ML +DP KRI++ + + H ++ + + AE+E + D++L+
Sbjct: 301 MLVIDPAKRISVDDALQHPYINV-WYDPAEVEAPPPQIYDKQLD 343
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 73/160 (45%), Gaps = 16/160 (10%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
D EA+I HP+V+ L + + ++ E+M+ + +R+ F + V
Sbjct: 80 DFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLD-SFLRQNDGQFTVIQLV 138
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPV-KLGGFGVAIQLQDGQLYC 169
+R + ++Y + + +HRD+ +L+ NS V K+ FG++ L+D
Sbjct: 139 G--MLRGIAAGMKYLADMNYVHRDLAARNILV----NSNLVCKVSDFGLSRFLEDDTSDP 192
Query: 170 SGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+ YT+ G +I + APE I+ +K+ D+W
Sbjct: 193 T-------YTSALGGKIPI-RWTAPEAIQYRKFTSASDVW 224
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 72/161 (44%), Gaps = 20/161 (12%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
D EA+I HP+++ L + + +V EYM+ + +R+ A F + V
Sbjct: 80 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD-SFLRKHDAQFTVIQLV 138
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPV-KLGGFGVAIQLQDGQLYC 169
+R + ++Y + +HRD+ +L+ NS V K+ FG++ L+D
Sbjct: 139 G--MLRGIASGMKYLSDMGYVHRDLAARNILI----NSNLVCKVSDFGLSRVLED----- 187
Query: 170 SGGERLDHYTTKAGHRIGTP-HYMAPEVIEDQKYGKPVDIW 209
+ YTT+ G P + +PE I +K+ D+W
Sbjct: 188 ---DPEAAYTTRGGK---IPIRWTSPEAIAYRKFTSASDVW 222
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 16/99 (16%)
Query: 113 HYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGG 172
+++ Q+L L+Y H +++HRD+KP +LL ++ +K+ FG+A ++ D
Sbjct: 130 YFLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTSDLKICDFGLA-RVADP------- 178
Query: 173 ERLDH-YTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
DH +T + T Y APE++ + K Y K +DIW
Sbjct: 179 ---DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIW 214
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 82/211 (38%), Gaps = 46/211 (21%)
Query: 31 IEPASFGLPDE--------RLNHYTTEADLKRE-----ATICHMLKHPHVVELLETYSSE 77
+E +FGL E ++ T AD K + H+ +H ++V LL +
Sbjct: 48 VEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHG 107
Query: 78 GMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVAS-------------------HYMRQV 118
G + ++ EY D+ + R+A A S A H+ QV
Sbjct: 108 GPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQV 167
Query: 119 LEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHY 178
+ + + + IHRD+ VLL N + K+G FG+A + + +Y
Sbjct: 168 AQGMAFLASKNCIHRDVAARNVLLTNGHVA---KIGDFGLARDIMND----------SNY 214
Query: 179 TTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
K R+ +MAPE I D Y D+W
Sbjct: 215 IVKGNARLPV-KWMAPESIFDCVYTVQSDVW 244
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 72/161 (44%), Gaps = 20/161 (12%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
D EA+I HP+++ L + + +V EYM+ + +R+ A F + V
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD-SFLRKHDAQFTVIQLV 150
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPV-KLGGFGVAIQLQDGQLYC 169
+R + ++Y + +HRD+ +L+ NS V K+ FG++ L+D
Sbjct: 151 G--MLRGIASGMKYLSDMGYVHRDLAARNILI----NSNLVCKVSDFGLSRVLED----- 199
Query: 170 SGGERLDHYTTKAGHRIGTP-HYMAPEVIEDQKYGKPVDIW 209
+ YTT+ G P + +PE I +K+ D+W
Sbjct: 200 ---DPEAAYTTRGGK---IPIRWTSPEAIAYRKFTSASDVW 234
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 72/161 (44%), Gaps = 20/161 (12%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
D EA+I HP+++ L + + +V EYM+ + +R+ A F + V
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD-SFLRKHDAQFTVIQLV 150
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPV-KLGGFGVAIQLQDGQLYC 169
+R + ++Y + +HRD+ +L+ NS V K+ FG++ L+D
Sbjct: 151 G--MLRGIASGMKYLSDMGYVHRDLAARNILI----NSNLVCKVSDFGLSRVLED----- 199
Query: 170 SGGERLDHYTTKAGHRIGTP-HYMAPEVIEDQKYGKPVDIW 209
+ YTT+ G P + +PE I +K+ D+W
Sbjct: 200 ---DPEAAYTTRGGK---IPIRWTSPEAIAYRKFTSASDVW 234
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 72/161 (44%), Gaps = 20/161 (12%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
D EA+I HP+++ L + + +V EYM+ + +R+ A F + V
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD-SFLRKHDAQFTVIQLV 150
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPV-KLGGFGVAIQLQDGQLYC 169
+R + ++Y + +HRD+ +L+ NS V K+ FG++ L+D
Sbjct: 151 G--MLRGIASGMKYLSDMGYVHRDLAARNILI----NSNLVCKVSDFGLSRVLED----- 199
Query: 170 SGGERLDHYTTKAGHRIGTP-HYMAPEVIEDQKYGKPVDIW 209
+ YTT+ G P + +PE I +K+ D+W
Sbjct: 200 ---DPEAAYTTRGGK---IPIRWTSPEAIAYRKFTSASDVW 234
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 72/161 (44%), Gaps = 20/161 (12%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
D EA+I HP+++ L + + +V EYM+ + +R+ A F + V
Sbjct: 63 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD-SFLRKHDAQFTVIQLV 121
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPV-KLGGFGVAIQLQDGQLYC 169
+R + ++Y + +HRD+ +L+ NS V K+ FG++ L+D
Sbjct: 122 G--MLRGIASGMKYLSDMGYVHRDLAARNILI----NSNLVCKVSDFGLSRVLED----- 170
Query: 170 SGGERLDHYTTKAGHRIGTP-HYMAPEVIEDQKYGKPVDIW 209
+ YTT+ G P + +PE I +K+ D+W
Sbjct: 171 ---DPEAAYTTRGGK---IPIRWTSPEAIAYRKFTSASDVW 205
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 72/161 (44%), Gaps = 20/161 (12%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
D EA+I HP+++ L + + +V EYM+ + +R+ A F + V
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD-SFLRKHDAQFTVIQLV 150
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPV-KLGGFGVAIQLQDGQLYC 169
+R + ++Y + +HRD+ +L+ NS V K+ FG++ L+D
Sbjct: 151 G--MLRGIASGMKYLSDMGYVHRDLAARNILI----NSNLVCKVSDFGLSRVLED----- 199
Query: 170 SGGERLDHYTTKAGHRIGTP-HYMAPEVIEDQKYGKPVDIW 209
+ YTT+ G P + +PE I +K+ D+W
Sbjct: 200 ---DPEAAYTTRGGK---IPIRWTSPEAIAYRKFTSASDVW 234
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 72/162 (44%), Gaps = 30/162 (18%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDICFEIVRRATAGFVYS 107
RE + + H +++ LL ++ + L Y+V E MD + ++++
Sbjct: 72 RELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN--LXQVIQMEL-----D 124
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQL 167
S+ + Q+L +++ H IIHRD+KP +++ ++ +K+ FG+A
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDXTLKILDFGLA-------- 173
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
R + + T +Y APEVI Y + VDIW
Sbjct: 174 ------RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIW 209
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 72/161 (44%), Gaps = 20/161 (12%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
D EA+I HP+++ L + + +V EYM+ + +R+ A F + V
Sbjct: 90 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD-SFLRKHDAQFTVIQLV 148
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPV-KLGGFGVAIQLQDGQLYC 169
+R + ++Y + +HRD+ +L+ NS V K+ FG++ L+D
Sbjct: 149 G--MLRGIASGMKYLSDMGYVHRDLAARNILI----NSNLVCKVSDFGLSRVLED----- 197
Query: 170 SGGERLDHYTTKAGHRIGTP-HYMAPEVIEDQKYGKPVDIW 209
+ YTT+ G P + +PE I +K+ D+W
Sbjct: 198 ---DPEAAYTTRGGK---IPIRWTSPEAIAYRKFTSASDVW 232
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 63/150 (42%), Gaps = 22/150 (14%)
Query: 65 PHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEALRY 124
P++V+ EG ++ E M S F + V E + ++AL +
Sbjct: 81 PYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNH 140
Query: 125 CHEN-DIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAG 183
EN IIHRDIKP +LL + S +KL FG++ QL D T AG
Sbjct: 141 LKENLKIIHRDIKPSNILL---DRSGNIKLCDFGISGQLVDSI----------AKTRDAG 187
Query: 184 HRIGTPHYMAPEVIED----QKYGKPVDIW 209
R YMAPE I+ Q Y D+W
Sbjct: 188 CR----PYMAPERIDPSASRQGYDVRSDVW 213
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 71/161 (44%), Gaps = 20/161 (12%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
D EA+I HP+++ L + + +V EYM+ + +R+ A F + V
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD-SFLRKHDAQFTVIQLV 150
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPV-KLGGFGVAIQLQDGQLYC 169
+R + ++Y + +HRD+ +L+ NS V K+ FG+ L+D
Sbjct: 151 G--MLRGIASGMKYLSDMGYVHRDLAARNILI----NSNLVCKVSDFGLGRVLED----- 199
Query: 170 SGGERLDHYTTKAGHRIGTP-HYMAPEVIEDQKYGKPVDIW 209
+ YTT+ G P + +PE I +K+ D+W
Sbjct: 200 ---DPEAAYTTRGGK---IPIRWTSPEAIAYRKFTSASDVW 234
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 16/99 (16%)
Query: 113 HYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGG 172
+++ Q+L L+Y H +++HRD+KP +LL + +K+ FG+A ++ D
Sbjct: 128 YFLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTXDLKIXDFGLA-RVADP------- 176
Query: 173 ERLDH-YTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
DH +T + T Y APE++ + K Y K +DIW
Sbjct: 177 ---DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIW 212
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 75/173 (43%), Gaps = 27/173 (15%)
Query: 50 ADLKREATICHML-KHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVY-- 106
+DL E + M+ KH +++ LL + +G LY++ EY ++ + R G Y
Sbjct: 63 SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCY 122
Query: 107 ------SEAVASHYM----RQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGF 156
E ++S + QV + Y IHRD+ VL+ E++ +K+ F
Sbjct: 123 NPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT--EDNV-MKIADF 179
Query: 157 GVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
G+A + +D+Y R+ +MAPE + D+ Y D+W
Sbjct: 180 GLARDIH----------HIDYYKKTTNGRLPV-KWMAPEALFDRIYTHQSDVW 221
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 67/152 (44%), Gaps = 29/152 (19%)
Query: 65 PHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEALRY 124
P++V+ T+ + +++ E M C E +++ G + E + +++AL Y
Sbjct: 84 PYIVQCFGTFITNTDVFIAMELMG---TCAEKLKKRMQGPI-PERILGKMTVAIVKALYY 139
Query: 125 CHEN-DIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAG 183
E +IHRD+KP +LL + +KL FG++ +L D KA
Sbjct: 140 LKEKHGVIHRDVKPSNILL---DERGQIKLCDFGISGRLVD---------------DKAK 181
Query: 184 HR-IGTPHYMAPEVIEDQKYGKP-----VDIW 209
R G YMAPE I+ KP D+W
Sbjct: 182 DRSAGCAAYMAPERIDPPDPTKPDYDIRADVW 213
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 75/173 (43%), Gaps = 27/173 (15%)
Query: 50 ADLKREATICHML-KHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVY-- 106
+DL E + M+ KH +++ LL + +G LY++ EY ++ + R G Y
Sbjct: 78 SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCY 137
Query: 107 ------SEAVASHYM----RQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGF 156
E ++S + QV + Y IHRD+ VL+ E++ +K+ F
Sbjct: 138 NPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT--EDNV-MKIADF 194
Query: 157 GVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
G+A + +D+Y R+ +MAPE + D+ Y D+W
Sbjct: 195 GLARDIH----------HIDYYKKTTNGRLPV-KWMAPEALFDRIYTHQSDVW 236
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 16/99 (16%)
Query: 113 HYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGG 172
+++ Q+L L+Y H +++HRD+KP +LL + +K+ FG+A ++ D
Sbjct: 132 YFLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLA-RVADP------- 180
Query: 173 ERLDH-YTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
DH +T + T Y APE++ + K Y K +DIW
Sbjct: 181 ---DHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIW 216
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 16/99 (16%)
Query: 113 HYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGG 172
+++ Q+L L+Y H +++HRD+KP +LL + +K+ FG+A ++ D
Sbjct: 133 YFLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLA-RVADP------- 181
Query: 173 ERLDH-YTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
DH +T + T Y APE++ + K Y K +DIW
Sbjct: 182 ---DHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIW 217
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 75/167 (44%), Gaps = 40/167 (23%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDICFEIVRRATAGFVYS 107
RE + +KH +V+ LL+ ++ L Y+V M G+D+ V S
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL---------NNIVKS 119
Query: 108 EAVASHYMR----QVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQ 163
+ + +++ Q+L L+Y H DIIHRD+KP LA E+S +K+ FG+
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAVNEDSE-LKILDFGL----- 171
Query: 164 DGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIW 209
C H + + T Y APE++ + Y + VDIW
Sbjct: 172 -----CR------HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 207
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 16/99 (16%)
Query: 113 HYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGG 172
+++ Q+L L+Y H +++HRD+KP +LL + +K+ FG+A ++ D
Sbjct: 128 YFLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLA-RVADP------- 176
Query: 173 ERLDH-YTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
DH +T + T Y APE++ + K Y K +DIW
Sbjct: 177 ---DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIW 212
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 30/162 (18%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDICFEIVRRATAGFVYS 107
RE + + H +++ LL ++ + L Y+V E MD +++C ++++
Sbjct: 72 RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD-ANLC-QVIQME-----LD 124
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQL 167
S+ + Q+L +++ H IIHRD+KP +++ ++ +K+ FG+A
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLA-------- 173
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
R + + T +Y APEVI Y + VDIW
Sbjct: 174 ------RTAGTSFMMTPEVVTRYYRAPEVILGMGYKENVDIW 209
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 16/99 (16%)
Query: 113 HYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGG 172
+++ Q+L L+Y H +++HRD+KP +LL + +K+ FG+A ++ D
Sbjct: 130 YFLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLA-RVADP------- 178
Query: 173 ERLDH-YTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
DH +T + T Y APE++ + K Y K +DIW
Sbjct: 179 ---DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIW 214
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 67/179 (37%), Gaps = 35/179 (19%)
Query: 47 TTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDI-------------- 92
+ D +REA + ML+H H+V + L MVFEYM D+
Sbjct: 62 SARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLL 121
Query: 93 -CFEIVRRATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPV 151
E V G AVAS QV + Y +HRD+ L+ V
Sbjct: 122 AGGEDVAPGPLGLGQLLAVAS----QVAAGMVYLAGLHFVHRDLATRNCLVG---QGLVV 174
Query: 152 KLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTP-HYMAPEVIEDQKYGKPVDIW 209
K+G FG++ + Y GG R P +M PE I +K+ D+W
Sbjct: 175 KIGDFGMSRDIYSTDYYRVGG------------RTMLPIRWMPPESILYRKFTTESDVW 221
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 16/99 (16%)
Query: 113 HYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGG 172
+++ Q+L L+Y H +++HRD+KP +LL + +K+ FG+A ++ D
Sbjct: 130 YFLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLA-RVADP------- 178
Query: 173 ERLDH-YTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
DH +T + T Y APE++ + K Y K +DIW
Sbjct: 179 ---DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIW 214
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 16/99 (16%)
Query: 113 HYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGG 172
+++ Q+L L+Y H +++HRD+KP +LL + +K+ FG+A ++ D
Sbjct: 132 YFLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLA-RVADP------- 180
Query: 173 ERLDH-YTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
DH +T + T Y APE++ + K Y K +DIW
Sbjct: 181 ---DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIW 216
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 16/99 (16%)
Query: 113 HYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGG 172
+++ Q+L L+Y H +++HRD+KP +LL + +K+ FG+A ++ D
Sbjct: 126 YFLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLA-RVADP------- 174
Query: 173 ERLDH-YTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
DH +T + T Y APE++ + K Y K +DIW
Sbjct: 175 ---DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIW 210
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 67/179 (37%), Gaps = 35/179 (19%)
Query: 47 TTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDI-------------- 92
+ D +REA + ML+H H+V + L MVFEYM D+
Sbjct: 56 SARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLL 115
Query: 93 -CFEIVRRATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPV 151
E V G AVAS QV + Y +HRD+ L+ V
Sbjct: 116 AGGEDVAPGPLGLGQLLAVAS----QVAAGMVYLAGLHFVHRDLATRNCLVG---QGLVV 168
Query: 152 KLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTP-HYMAPEVIEDQKYGKPVDIW 209
K+G FG++ + Y GG R P +M PE I +K+ D+W
Sbjct: 169 KIGDFGMSRDIYSTDYYRVGG------------RTMLPIRWMPPESILYRKFTTESDVW 215
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 67/179 (37%), Gaps = 35/179 (19%)
Query: 47 TTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDI-------------- 92
+ D +REA + ML+H H+V + L MVFEYM D+
Sbjct: 85 SARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLL 144
Query: 93 -CFEIVRRATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPV 151
E V G AVAS QV + Y +HRD+ L+ V
Sbjct: 145 AGGEDVAPGPLGLGQLLAVAS----QVAAGMVYLAGLHFVHRDLATRNCLVG---QGLVV 197
Query: 152 KLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTP-HYMAPEVIEDQKYGKPVDIW 209
K+G FG++ + Y GG R P +M PE I +K+ D+W
Sbjct: 198 KIGDFGMSRDIYSTDYYRVGG------------RTMLPIRWMPPESILYRKFTTESDVW 244
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 16/99 (16%)
Query: 113 HYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGG 172
+++ Q+L L+Y H +++HRD+KP +LL + +K+ FG+A ++ D
Sbjct: 133 YFLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLA-RVADP------- 181
Query: 173 ERLDH-YTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
DH +T + T Y APE++ + K Y K +DIW
Sbjct: 182 ---DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIW 217
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 71/162 (43%), Gaps = 30/162 (18%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDICFEIVRRATAGFVYS 107
RE + + H +++ LL ++ + L Y+V E MD +++C I
Sbjct: 70 RELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVI------HMELD 122
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQL 167
S+ + Q+L +++ H IIHRD+KP +++ ++ +K+ FG+A
Sbjct: 123 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLA-------- 171
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
R + T +Y APEVI Y + VDIW
Sbjct: 172 ------RTASTNFMMTPYVVTRYYRAPEVILGMGYKENVDIW 207
Score = 27.7 bits (60), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 1 MLSVDPNKRITIHEVINHKWLKMKLHTSAEIEPASFGLPDERL 43
ML +DP+KRI++ E + H ++ + + AE E + D +L
Sbjct: 299 MLVIDPDKRISVDEALRHPYITV-WYDPAEAEAPPPQIYDAQL 340
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 16/99 (16%)
Query: 113 HYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGG 172
+++ Q+L L+Y H +++HRD+KP +LL + +K+ FG+A ++ D
Sbjct: 134 YFLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLA-RVADP------- 182
Query: 173 ERLDH-YTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
DH +T + T Y APE++ + K Y K +DIW
Sbjct: 183 ---DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIW 218
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 16/99 (16%)
Query: 113 HYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGG 172
+++ Q+L L+Y H +++HRD+KP +LL + +K+ FG+A ++ D
Sbjct: 125 YFLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLA-RVADP------- 173
Query: 173 ERLDH-YTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
DH +T + T Y APE++ + K Y K +DIW
Sbjct: 174 ---DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIW 209
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 16/99 (16%)
Query: 113 HYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGG 172
+++ Q+L L+Y H +++HRD+KP +LL + +K+ FG+A ++ D
Sbjct: 132 YFLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLA-RVADP------- 180
Query: 173 ERLDH-YTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
DH +T + T Y APE++ + K Y K +DIW
Sbjct: 181 ---DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIW 216
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 16/99 (16%)
Query: 113 HYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGG 172
+++ Q+L L+Y H +++HRD+KP +LL + +K+ FG+A ++ D
Sbjct: 136 YFLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLA-RVADP------- 184
Query: 173 ERLDH-YTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
DH +T + T Y APE++ + K Y K +DIW
Sbjct: 185 ---DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIW 220
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 16/99 (16%)
Query: 113 HYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGG 172
+++ Q+L L+Y H +++HRD+KP +LL + +K+ FG+A ++ D
Sbjct: 128 YFLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLA-RVADP------- 176
Query: 173 ERLDH-YTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
DH +T + T Y APE++ + K Y K +DIW
Sbjct: 177 ---DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIW 212
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 16/99 (16%)
Query: 113 HYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGG 172
+++ Q+L L+Y H +++HRD+KP +LL + +K+ FG+A ++ D
Sbjct: 132 YFLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLA-RVADP------- 180
Query: 173 ERLDH-YTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
DH +T + T Y APE++ + K Y K +DIW
Sbjct: 181 ---DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIW 216
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 16/99 (16%)
Query: 113 HYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGG 172
+++ Q+L L+Y H +++HRD+KP +LL + +K+ FG+A ++ D
Sbjct: 128 YFLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTXDLKICDFGLA-RVADP------- 176
Query: 173 ERLDH-YTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
DH +T + T Y APE++ + K Y K +DIW
Sbjct: 177 ---DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIW 212
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 16/99 (16%)
Query: 113 HYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGG 172
+++ Q+L L+Y H +++HRD+KP +LL + +K+ FG+A ++ D
Sbjct: 128 YFLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTXDLKICDFGLA-RVADP------- 176
Query: 173 ERLDH-YTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
DH +T + T Y APE++ + K Y K +DIW
Sbjct: 177 ---DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIW 212
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 16/99 (16%)
Query: 113 HYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGG 172
+++ Q+L L+Y H +++HRD+KP +LL + +K+ FG+A ++ D
Sbjct: 132 YFLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTXDLKICDFGLA-RVADP------- 180
Query: 173 ERLDH-YTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
DH +T + T Y APE++ + K Y K +DIW
Sbjct: 181 ---DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIW 216
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 16/99 (16%)
Query: 113 HYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGG 172
+++ Q+L L+Y H +++HRD+KP +LL + +K+ FG+A ++ D
Sbjct: 132 YFLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTXDLKICDFGLA-RVADP------- 180
Query: 173 ERLDH-YTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
DH +T + T Y APE++ + K Y K +DIW
Sbjct: 181 ---DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIW 216
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 16/99 (16%)
Query: 113 HYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGG 172
+++ Q+L L+Y H +++HRD+KP +LL + +K+ FG+A ++ D
Sbjct: 126 YFLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLA-RVADP------- 174
Query: 173 ERLDH-YTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
DH +T + T Y APE++ + K Y K +DIW
Sbjct: 175 ---DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIW 210
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 83/162 (51%), Gaps = 25/162 (15%)
Query: 54 REATICHMLKHPHVV---ELLETYSSEGM--LYMVFEYMDGSDICFEIVRRATAGFVYSE 108
RE I +H +V+ ++L + E M +Y+V + M+ +D+ +++++ S
Sbjct: 90 REIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLME-TDL-YKLLKSQQ----LSN 143
Query: 109 AVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLY 168
+++ Q+L L+Y H +++HRD+KP +L+ + +K+ FG+A ++ D +
Sbjct: 144 DHICYFLYQILRGLKYIHSANVLHRDLKPSNLLI---NTTCDLKICDFGLA-RIADPE-- 197
Query: 169 CSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
DH T + T Y APE++ + K Y K +DIW
Sbjct: 198 ------HDH-TGFLTEXVATRWYRAPEIMLNSKGYTKSIDIW 232
Score = 34.3 bits (77), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 8/51 (15%)
Query: 1 MLSVDPNKRITIHEVINHKWLKMKLHTSAEI---EPASFG-----LPDERL 43
ML+ +PNKRIT+ E + H +L+ + E EP +F LP ERL
Sbjct: 313 MLTFNPNKRITVEEALAHPYLEQYYDPTDEPVAEEPFTFAMELDDLPKERL 363
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 16/99 (16%)
Query: 113 HYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGG 172
+++ Q+L L+Y H +++HRD+KP +LL + +K+ FG+A ++ D
Sbjct: 148 YFLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTCDLKICDFGLA-RVADP------- 196
Query: 173 ERLDH-YTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
DH +T + T Y APE++ + K Y K +DIW
Sbjct: 197 ---DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIW 232
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 16/99 (16%)
Query: 113 HYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGG 172
+++ Q+L L+Y H +++HRD+KP +LL + +K+ FG+A ++ D
Sbjct: 148 YFLYQILRGLKYIHSANVLHRDLKPSNLLL---NTTXDLKICDFGLA-RVADP------- 196
Query: 173 ERLDH-YTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
DH +T + T Y APE++ + K Y K +DIW
Sbjct: 197 ---DHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIW 232
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 65/168 (38%), Gaps = 23/168 (13%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
D REA + L+H H+V+ L MVFEYM D+ + + +E
Sbjct: 61 DFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGN 120
Query: 111 AS---------HYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQ 161
H +Q+ + Y +HRD+ L+ EN VK+G FG++
Sbjct: 121 PPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVG--ENLL-VKIGDFGMSRD 177
Query: 162 LQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+ Y G GH + +M PE I +K+ D+W
Sbjct: 178 VYSTDYYRVG-----------GHTMLPIRWMPPESIMYRKFTTESDVW 214
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 73/162 (45%), Gaps = 30/162 (18%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDICFEIVRRATAGFVYS 107
RE + + H +++ LL ++ + L Y+V E MD + ++++
Sbjct: 72 RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMEL-----D 124
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQL 167
S+ + Q+L +++ H IIHRD+KP +++ ++ A +K+ FG+A
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDATLKILDFGLA-------- 173
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
R + + T +Y APEVI Y + VDIW
Sbjct: 174 ------RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIW 209
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 42/168 (25%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDI-----CFEIVRRATA 102
RE + +KH +V+ LL+ ++ L Y+V M G+D+ C ++
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQ 128
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
+Y Q+L L+Y H DIIHRD+KP LA E+ +K+ FG+A
Sbjct: 129 FLIY----------QILRGLKYIHSADIIHRDLKPSN--LAVNEDCE-LKILDFGLA--- 172
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIW 209
H + + T Y APE++ + Y + VDIW
Sbjct: 173 -------------RHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIW 207
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 42/168 (25%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDI-----CFEIVRRATA 102
RE + +KH +V+ LL+ ++ L Y+V M G+D+ C ++
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQ 128
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
+Y Q+L L+Y H DIIHRD+KP LA E+ +K+ FG+A
Sbjct: 129 FLIY----------QILRGLKYIHSADIIHRDLKPSN--LAVNEDCE-LKILDFGLA--- 172
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIW 209
H + + T Y APE++ + Y + VDIW
Sbjct: 173 -------------RHTDDEMTGXVATRWYRAPEIMLNWMHYNQTVDIW 207
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 42/168 (25%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDI-----CFEIVRRATA 102
RE + +KH +V+ LL+ ++ L Y+V M G+D+ C ++
Sbjct: 75 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQ 133
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
+Y Q+L L+Y H DIIHRD+KP LA E+ +K+ FG+A
Sbjct: 134 FLIY----------QILRGLKYIHSADIIHRDLKPSN--LAVNEDXE-LKILDFGLA--- 177
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIW 209
H + + T Y APE++ + Y + VDIW
Sbjct: 178 -------------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 212
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 42/168 (25%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDI-----CFEIVRRATA 102
RE + +KH +V+ LL+ ++ L Y+V M G+D+ C ++
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQ 128
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
+Y Q+L L+Y H DIIHRD+KP LA E+ +K+ FG+A
Sbjct: 129 FLIY----------QILRGLKYIHSADIIHRDLKPSN--LAVNEDCE-LKILDFGLA--- 172
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIW 209
H + + T Y APE++ + Y + VDIW
Sbjct: 173 -------------RHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIW 207
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 42/168 (25%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDI-----CFEIVRRATA 102
RE + +KH +V+ LL+ ++ L Y+V M G+D+ C ++
Sbjct: 77 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQ 135
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
+Y Q+L L+Y H DIIHRD+KP LA E+ +K+ FG+A
Sbjct: 136 FLIY----------QILRGLKYIHSADIIHRDLKPSN--LAVNEDCE-LKILDFGLA--- 179
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIW 209
H + + T Y APE++ + Y + VDIW
Sbjct: 180 -------------RHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 214
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 42/168 (25%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDI-----CFEIVRRATA 102
RE + +KH +V+ LL+ ++ L Y+V M G+D+ C ++
Sbjct: 75 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQ 133
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
+Y Q+L L+Y H DIIHRD+KP LA E+ +K+ FG+A
Sbjct: 134 FLIY----------QILRGLKYIHSADIIHRDLKPSN--LAVNEDXE-LKILDFGLA--- 177
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIW 209
H + + T Y APE++ + Y + VDIW
Sbjct: 178 -------------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 212
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 74/163 (45%), Gaps = 32/163 (19%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDICFEIVRRATAGFVYS 107
RE + +KH +V+ LL+ ++ L Y+V M G+D+ IV+ A +
Sbjct: 66 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLN-NIVKCAK----LT 119
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQL 167
+ + Q+L L+Y H DIIHRD+KP LA E+ +K+ FG+A
Sbjct: 120 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAVNEDCE-LKILDFGLA-------- 168
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIW 209
H + + T Y APE++ + Y + VDIW
Sbjct: 169 --------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 203
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 42/168 (25%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDI-----CFEIVRRATA 102
RE + +KH +V+ LL+ ++ L Y+V M G+D+ C ++
Sbjct: 81 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQ 139
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
+Y Q+L L+Y H DIIHRD+KP LA E+ +K+ FG+A
Sbjct: 140 FLIY----------QILRGLKYIHSADIIHRDLKPSN--LAVNEDXE-LKILDFGLA--- 183
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIW 209
H + + T Y APE++ + Y + VDIW
Sbjct: 184 -------------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 218
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 30/162 (18%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDICFEIVRRATAGFVYS 107
RE + + H +++ LL ++ + L Y+V E MD +++C ++++
Sbjct: 72 RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD-ANLC-QVIQMEL-----D 124
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQL 167
S+ + Q+L +++ H IIHRD+KP +++ ++ +K+ FG+A
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLA-------- 173
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
R + + T +Y APEVI Y + VDIW
Sbjct: 174 ------RTAGTSFMMEPEVVTRYYRAPEVILGMGYKENVDIW 209
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 42/168 (25%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDI-----CFEIVRRATA 102
RE + +KH +V+ LL+ ++ L Y+V M G+D+ C ++
Sbjct: 66 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQ 124
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
+Y Q+L L+Y H DIIHRD+KP LA E+ +K+ FG+A
Sbjct: 125 FLIY----------QILRGLKYIHSADIIHRDLKPSN--LAVNEDCE-LKILDFGLA--- 168
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIW 209
H + + T Y APE++ + Y + VDIW
Sbjct: 169 -------------RHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIW 203
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 73/163 (44%), Gaps = 32/163 (19%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDICFEIVRRATAGFVYS 107
RE + +KH +V+ LL+ ++ L Y+V M G+D+ IV+ +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLN-NIVKXQK----LT 123
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQL 167
+ + Q+L L+Y H DIIHRD+KP LA E+ +K+ FG+A
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAVNEDXE-LKILDFGLA-------- 172
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIW 209
H + + T Y APE++ + Y + VDIW
Sbjct: 173 --------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 207
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 53/98 (54%), Gaps = 13/98 (13%)
Query: 113 HYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGG 172
+++ Q+L L+Y H +IHRD+KP +L+ EN +K+G FG+A L C+
Sbjct: 162 YFLYQLLRGLKYMHSAQVIHRDLKPSNLLV--NENCE-LKIGDFGMARGL------CTSP 212
Query: 173 ERLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIW 209
++ T+ + T Y APE++ +Y + +D+W
Sbjct: 213 AEHQYFMTE---YVATRWYRAPELMLSLHEYTQAIDLW 247
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 30/162 (18%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDICFEIVRRATAGFVYS 107
RE + + H +++ LL ++ + L Y+V E MD +++C ++++
Sbjct: 72 RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD-ANLC-QVIQMEL-----D 124
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQL 167
S+ + Q+L +++ H IIHRD+KP +++ ++ +K+ FG+A
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLA-------- 173
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
R + + T +Y APEVI Y + VDIW
Sbjct: 174 ------RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIW 209
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 42/168 (25%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDI-----CFEIVRRATA 102
RE + +KH +V+ LL+ ++ L Y+V M G+D+ C ++
Sbjct: 77 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQ 135
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
+Y Q+L L+Y H DIIHRD+KP LA E+ +K+ FG+A
Sbjct: 136 FLIY----------QILRGLKYIHSADIIHRDLKPSN--LAVNEDCE-LKILDFGLA--- 179
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIW 209
H + + T Y APE++ + Y + VDIW
Sbjct: 180 -------------RHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 214
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 42/168 (25%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDI-----CFEIVRRATA 102
RE + +KH +V+ LL+ ++ L Y+V M G+D+ C ++
Sbjct: 77 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQ 135
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
+Y Q+L L+Y H DIIHRD+KP LA E+ +K+ FG+A
Sbjct: 136 FLIY----------QILRGLKYIHSADIIHRDLKPSN--LAVNEDCE-LKILDFGLA--- 179
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIW 209
H + + T Y APE++ + Y + VDIW
Sbjct: 180 -------------RHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 214
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 30/162 (18%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDICFEIVRRATAGFVYS 107
RE + + H +++ LL ++ + L Y+V E MD +++C ++++
Sbjct: 73 RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD-ANLC-QVIQMEL-----D 125
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQL 167
S+ + Q+L +++ H IIHRD+KP +++ ++ +K+ FG+A
Sbjct: 126 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLA-------- 174
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
R + + T +Y APEVI Y + VDIW
Sbjct: 175 ------RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIW 210
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 30/162 (18%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDICFEIVRRATAGFVYS 107
RE + + H +++ LL ++ + L Y+V E MD +++C ++++
Sbjct: 72 RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD-ANLC-QVIQMEL-----D 124
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQL 167
S+ + Q+L +++ H IIHRD+KP +++ ++ +K+ FG+A
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLA-------- 173
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
R + + T +Y APEVI Y + VDIW
Sbjct: 174 ------RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIW 209
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 42/168 (25%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDI-----CFEIVRRATA 102
RE + +KH +V+ LL+ ++ L Y+V M G+D+ C ++
Sbjct: 90 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQ 148
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
+Y Q+L L+Y H DIIHRD+KP LA E+ +K+ FG+A
Sbjct: 149 FLIY----------QILRGLKYIHSADIIHRDLKPSN--LAVNEDCE-LKILDFGLA--- 192
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIW 209
H + + T Y APE++ + Y + VDIW
Sbjct: 193 -------------RHTDDEMXGXVATRWYRAPEIMLNWMHYNQTVDIW 227
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 42/168 (25%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDI-----CFEIVRRATA 102
RE + +KH +V+ LL+ ++ L Y+V M G+D+ C ++
Sbjct: 76 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQ 134
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
+Y Q+L L+Y H DIIHRD+KP LA E+ +K+ FG+A
Sbjct: 135 FLIY----------QILRGLKYIHSADIIHRDLKPSN--LAVNED-CELKILDFGLA--- 178
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIW 209
H + + T Y APE++ + Y + VDIW
Sbjct: 179 -------------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 213
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 42/168 (25%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDI-----CFEIVRRATA 102
RE + +KH +V+ LL+ ++ L Y+V M G+D+ C ++
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQ 128
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
+Y Q+L L+Y H DIIHRD+KP LA E+ +K+ FG+A
Sbjct: 129 FLIY----------QILRGLKYIHSADIIHRDLKPSN--LAVNEDCE-LKILDFGLA--- 172
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIW 209
H + + T Y APE++ + Y + VDIW
Sbjct: 173 -------------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 207
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 42/168 (25%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDI-----CFEIVRRATA 102
RE + +KH +V+ LL+ ++ L Y+V M G+D+ C ++
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQ 128
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
+Y Q+L L+Y H DIIHRD+KP LA E+ +K+ FG+A
Sbjct: 129 FLIY----------QILRGLKYIHSADIIHRDLKPSN--LAVNEDCE-LKILDFGLA--- 172
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIW 209
H + + T Y APE++ + Y + VDIW
Sbjct: 173 -------------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 207
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 67/155 (43%), Gaps = 17/155 (10%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
EA + L+H +V L + E +Y++ EYM + + ++ G V + +
Sbjct: 58 EANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSL-LDFLKSDEGGKVLLPKLID-F 115
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
Q+ E + Y + IHRD++ VL++ S K+ FG+A ++D
Sbjct: 116 SAQIAEGMAYIERKNYIHRDLRAANVLVS---ESLMCKIADFGLARVIED---------- 162
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+ YT + G + + APE I + D+W
Sbjct: 163 -NEYTAREGAKFPI-KWTAPEAINFGCFTIKSDVW 195
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 42/168 (25%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDI-----CFEIVRRATA 102
RE + +KH +V+ LL+ ++ L Y+V M G+D+ C ++
Sbjct: 75 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQ 133
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
+Y Q+L L+Y H DIIHRD+KP LA E+ +K+ FG+A
Sbjct: 134 FLIY----------QILRGLKYIHSADIIHRDLKPSN--LAVNEDCE-LKILDFGLA--- 177
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIW 209
H + + T Y APE++ + Y + VDIW
Sbjct: 178 -------------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 212
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 77/167 (46%), Gaps = 40/167 (23%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDICFEIVRRATAGFVYS 107
RE + LKH +V+ LL+ ++ + Y+V M G+D+ V
Sbjct: 76 RELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM-GADLN---------NIVKC 125
Query: 108 EAVASHYMR----QVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQ 163
+A++ +++ Q+L L+Y H IIHRD+KP V A E+S +++ FG+A Q
Sbjct: 126 QALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNV--AVNEDSE-LRILDFGLARQ-- 180
Query: 164 DGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIW 209
E + Y + T Y APE++ + Y + VDIW
Sbjct: 181 -------ADEEMTGY-------VATRWYRAPEIMLNWMHYNQTVDIW 213
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 42/168 (25%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDI-----CFEIVRRATA 102
RE + +KH +V+ LL+ ++ L Y+V M G+D+ C ++
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQ 128
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
+Y Q+L L+Y H DIIHRD+KP LA E+ +K+ FG+A
Sbjct: 129 FLIY----------QILRGLKYIHSADIIHRDLKPSN--LAVNEDCE-LKILDFGLA--- 172
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIW 209
H + + T Y APE++ + Y + VDIW
Sbjct: 173 -------------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 207
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 42/168 (25%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDI-----CFEIVRRATA 102
RE + +KH +V+ LL+ ++ L Y+V M G+D+ C ++
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQ 128
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
+Y Q+L L+Y H DIIHRD+KP LA E+ +K+ FG+A
Sbjct: 129 FLIY----------QILRGLKYIHSADIIHRDLKPSN--LAVNEDCE-LKILDFGLA--- 172
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
H + + T Y APE++ + Y + VDIW
Sbjct: 173 -------------RHTDDEMTGYVATRWYRAPEIMLNAMHYNQTVDIW 207
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 42/168 (25%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDI-----CFEIVRRATA 102
RE + +KH +V+ LL+ ++ L Y+V M G+D+ C ++
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQ 128
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
+Y Q+L L+Y H DIIHRD+KP LA E+ +K+ FG+A
Sbjct: 129 FLIY----------QILRGLKYIHSADIIHRDLKPSN--LAVNEDCE-LKILDFGLA--- 172
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIW 209
H + + T Y APE++ + Y + VDIW
Sbjct: 173 -------------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 207
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 74/171 (43%), Gaps = 26/171 (15%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYS--- 107
+ + EA + L+HP+VV LL + + L M+F Y D+ +V R+ V S
Sbjct: 58 EFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDD 117
Query: 108 -EAVAS--------HYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGV 158
V S H + Q+ + Y + ++H+D+ VL+ +K N LG F
Sbjct: 118 DRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLF-- 175
Query: 159 AIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
++Y + D+Y G+ + +MAPE I K+ DIW
Sbjct: 176 ------REVYAA-----DYYKL-LGNSLLPIRWMAPEAIMYGKFSIDSDIW 214
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 42/168 (25%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDI-----CFEIVRRATA 102
RE + +KH +V+ LL+ ++ L Y+V M G+D+ C ++
Sbjct: 75 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQ 133
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
+Y Q+L L+Y H DIIHRD+KP LA E+ +K+ FG+A
Sbjct: 134 FLIY----------QILRGLKYIHSADIIHRDLKPSN--LAVNEDCE-LKILDFGLA--- 177
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIW 209
H + + T Y APE++ + Y + VDIW
Sbjct: 178 -------------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 212
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 42/168 (25%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDI-----CFEIVRRATA 102
RE + +KH +V+ LL+ ++ L Y+V M G+D+ C ++
Sbjct: 69 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQ 127
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
+Y Q+L L+Y H DIIHRD+KP LA E+ +K+ FG+A
Sbjct: 128 FLIY----------QILRGLKYIHSADIIHRDLKPSN--LAVNEDCE-LKILDFGLA--- 171
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIW 209
H + + T Y APE++ + Y + VDIW
Sbjct: 172 -------------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 206
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 42/168 (25%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDI-----CFEIVRRATA 102
RE + +KH +V+ LL+ ++ L Y+V M G+D+ C ++
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQ 128
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
+Y Q+L L+Y H DIIHRD+KP LA E+ +K+ FG+A
Sbjct: 129 FLIY----------QILRGLKYIHSADIIHRDLKPSN--LAVNEDCE-LKILDFGLA--- 172
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIW 209
H + + T Y APE++ + Y + VDIW
Sbjct: 173 -------------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 207
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 42/168 (25%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDI-----CFEIVRRATA 102
RE + +KH +V+ LL+ ++ L Y+V M G+D+ C ++
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQ 128
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
+Y Q+L L+Y H DIIHRD+KP LA E+ +K+ FG+A
Sbjct: 129 FLIY----------QILRGLKYIHSADIIHRDLKPSN--LAVNEDCE-LKILDFGLA--- 172
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIW 209
H + + T Y APE++ + Y + VDIW
Sbjct: 173 -------------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 207
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 42/168 (25%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDI-----CFEIVRRATA 102
RE + +KH +V+ LL+ ++ L Y+V M G+D+ C ++
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQ 128
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
+Y Q+L L+Y H DIIHRD+KP LA E+ +K+ FG+A
Sbjct: 129 FLIY----------QILRGLKYIHSADIIHRDLKPSN--LAVNEDCE-LKILDFGLA--- 172
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIW 209
H + + T Y APE++ + Y + VDIW
Sbjct: 173 -------------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 207
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 42/168 (25%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDI-----CFEIVRRATA 102
RE + +KH +V+ LL+ ++ L Y+V M G+D+ C ++
Sbjct: 67 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQ 125
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
+Y Q+L L+Y H DIIHRD+KP LA E+ +K+ FG+A
Sbjct: 126 FLIY----------QILRGLKYIHSADIIHRDLKPSN--LAVNEDCE-LKILDFGLA--- 169
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIW 209
H + + T Y APE++ + Y + VDIW
Sbjct: 170 -------------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 204
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 42/168 (25%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDI-----CFEIVRRATA 102
RE + +KH +V+ LL+ ++ L Y+V M G+D+ C ++
Sbjct: 81 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQ 139
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
+Y Q+L L+Y H DIIHRD+KP LA E+ +K+ FG+A
Sbjct: 140 FLIY----------QILRGLKYIHSADIIHRDLKPSN--LAVNEDCE-LKILDFGLA--- 183
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIW 209
H + + T Y APE++ + Y + VDIW
Sbjct: 184 -------------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 218
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 42/168 (25%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDI-----CFEIVRRATA 102
RE + +KH +V+ LL+ ++ L Y+V M G+D+ C ++
Sbjct: 68 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQ 126
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
+Y Q+L L+Y H DIIHRD+KP LA E+ +K+ FG+A
Sbjct: 127 FLIY----------QILRGLKYIHSADIIHRDLKPSN--LAVNEDCE-LKILDFGLA--- 170
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIW 209
H + + T Y APE++ + Y + VDIW
Sbjct: 171 -------------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 205
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 42/168 (25%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDI-----CFEIVRRATA 102
RE + +KH +V+ LL+ ++ L Y+V M G+D+ C ++
Sbjct: 77 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQ 135
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
+Y Q+L L+Y H DIIHRD+KP LA E+ +K+ FG+A
Sbjct: 136 FLIY----------QILRGLKYIHSADIIHRDLKPSN--LAVNEDCE-LKILDFGLA--- 179
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIW 209
H + + T Y APE++ + Y + VDIW
Sbjct: 180 -------------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 214
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 42/168 (25%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDI-----CFEIVRRATA 102
RE + +KH +V+ LL+ ++ L Y+V M G+D+ C ++
Sbjct: 72 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQ 130
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
+Y Q+L L+Y H DIIHRD+KP LA E+ +K+ FG+A
Sbjct: 131 FLIY----------QILRGLKYIHSADIIHRDLKPSN--LAVNED-CELKILDFGLA--- 174
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIW 209
H + + T Y APE++ + Y + VDIW
Sbjct: 175 -------------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 209
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 42/168 (25%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDI-----CFEIVRRATA 102
RE + +KH +V+ LL+ ++ L Y+V M G+D+ C ++
Sbjct: 82 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQ 140
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
+Y Q+L L+Y H DIIHRD+KP LA E+ +K+ FG+A
Sbjct: 141 FLIY----------QILRGLKYIHSADIIHRDLKPSN--LAVNED-CELKILDFGLA--- 184
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIW 209
H + + T Y APE++ + Y + VDIW
Sbjct: 185 -------------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 219
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 74/171 (43%), Gaps = 26/171 (15%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYS--- 107
+ + EA + L+HP+VV LL + + L M+F Y D+ +V R+ V S
Sbjct: 75 EFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDD 134
Query: 108 -EAVAS--------HYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGV 158
V S H + Q+ + Y + ++H+D+ VL+ +K N LG F
Sbjct: 135 DRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLF-- 192
Query: 159 AIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
++Y + D+Y G+ + +MAPE I K+ DIW
Sbjct: 193 ------REVYAA-----DYYKL-LGNSLLPIRWMAPEAIMYGKFSIDSDIW 231
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 42/168 (25%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDI-----CFEIVRRATA 102
RE + +KH +V+ LL+ ++ L Y+V M G+D+ C ++
Sbjct: 82 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQ 140
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
+Y Q+L L+Y H DIIHRD+KP LA E+ +K+ FG+A
Sbjct: 141 FLIY----------QILRGLKYIHSADIIHRDLKPSN--LAVNED-CELKILDFGLA--- 184
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIW 209
H + + T Y APE++ + Y + VDIW
Sbjct: 185 -------------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 219
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 42/168 (25%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDI-----CFEIVRRATA 102
RE + +KH +V+ LL+ ++ L Y+V M G+D+ C ++
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQ 128
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
+Y Q+L L+Y H DIIHRD+KP LA E+ +K+ FG+A
Sbjct: 129 FLIY----------QILRGLKYIHSADIIHRDLKPSN--LAVNEDCE-LKILDFGLA--- 172
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIW 209
H + + T Y APE++ + Y + VDIW
Sbjct: 173 -------------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 207
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 42/168 (25%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDI-----CFEIVRRATA 102
RE + +KH +V+ LL+ ++ L Y+V M G+D+ C ++
Sbjct: 67 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQ 125
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
+Y Q+L L+Y H DIIHRD+KP LA E+ +K+ FG+A
Sbjct: 126 FLIY----------QILRGLKYIHSADIIHRDLKPSN--LAVNEDCE-LKILDFGLA--- 169
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIW 209
H + + T Y APE++ + Y + VDIW
Sbjct: 170 -------------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 204
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 42/168 (25%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDI-----CFEIVRRATA 102
RE + +KH +V+ LL+ ++ L Y+V M G+D+ C ++
Sbjct: 90 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQ 148
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
+Y Q+L L+Y H DIIHRD+KP LA E+ +K+ FG+A
Sbjct: 149 FLIY----------QILRGLKYIHSADIIHRDLKPSN--LAVNEDCE-LKILDFGLA--- 192
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIW 209
H + + T Y APE++ + Y + VDIW
Sbjct: 193 -------------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 227
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 42/168 (25%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDI-----CFEIVRRATA 102
RE + +KH +V+ LL+ ++ L Y+V M G+D+ C ++
Sbjct: 66 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQ 124
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
+Y Q+L L+Y H DIIHRD+KP LA E+ +K+ FG+A
Sbjct: 125 FLIY----------QILRGLKYIHSADIIHRDLKPSN--LAVNEDCE-LKILDFGLA--- 168
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIW 209
H + + T Y APE++ + Y + VDIW
Sbjct: 169 -------------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 203
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 65/156 (41%), Gaps = 16/156 (10%)
Query: 55 EATICHMLKHPHVVELLET-YSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
E I HP+V+ LL SEG +V YM D+ +R T + +
Sbjct: 99 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIG-- 155
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
+ QV + ++Y +HRD+ +L K VK+ FG+A + D + Y
Sbjct: 156 FGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFT---VKVADFGLARDMYDKEYYS---- 208
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
K G ++ +MA E ++ QK+ D+W
Sbjct: 209 ----VHNKTGAKLPV-KWMALESLQTQKFTTKSDVW 239
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 53/98 (54%), Gaps = 13/98 (13%)
Query: 113 HYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGG 172
+++ Q+L L+Y H +IHRD+KP +L+ EN +K+G FG+A L C+
Sbjct: 163 YFLYQLLRGLKYMHSAQVIHRDLKPSNLLV--NENCE-LKIGDFGMARGL------CTSP 213
Query: 173 ERLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIW 209
++ T+ + T Y APE++ +Y + +D+W
Sbjct: 214 AEHQYFMTE---YVATRWYRAPELMLSLHEYTQAIDLW 248
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 42/168 (25%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDI-----CFEIVRRATA 102
RE + +KH +V+ LL+ ++ L Y+V M G+D+ C ++
Sbjct: 89 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQ 147
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
+Y Q+L L+Y H DIIHRD+KP LA E+ +K+ FG+A
Sbjct: 148 FLIY----------QILRGLKYIHSADIIHRDLKPSN--LAVNEDCE-LKILDFGLA--- 191
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIW 209
H + + T Y APE++ + Y + VDIW
Sbjct: 192 -------------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 226
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 42/168 (25%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDI-----CFEIVRRATA 102
RE + +KH +V+ LL+ ++ L Y+V M G+D+ C ++
Sbjct: 76 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQ 134
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
+Y Q+L L+Y H DIIHRD+KP LA E+ +K+ FG+A
Sbjct: 135 FLIY----------QILRGLKYIHSADIIHRDLKPSN--LAVNEDCE-LKILDFGLA--- 178
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIW 209
H + + T Y APE++ + Y + VDIW
Sbjct: 179 -------------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 213
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 42/168 (25%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDI-----CFEIVRRATA 102
RE + +KH +V+ LL+ ++ L Y+V M G+D+ C ++
Sbjct: 82 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQ 140
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
+Y Q+L L+Y H DIIHRD+KP LA E+ +K+ FG+A
Sbjct: 141 FLIY----------QILRGLKYIHSADIIHRDLKPSN--LAVNED-CELKILDFGLA--- 184
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIW 209
H + + T Y APE++ + Y + VDIW
Sbjct: 185 -------------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 219
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 42/168 (25%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDI-----CFEIVRRATA 102
RE + +KH +V+ LL+ ++ L Y+V M G+D+ C ++
Sbjct: 93 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQ 151
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
+Y Q+L L+Y H DIIHRD+KP LA E+ +K+ FG+A
Sbjct: 152 FLIY----------QILRGLKYIHSADIIHRDLKPSN--LAVNEDCE-LKILDFGLA--- 195
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIW 209
H + + T Y APE++ + Y + VDIW
Sbjct: 196 -------------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 230
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 42/168 (25%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDI-----CFEIVRRATA 102
RE + +KH +V+ LL+ ++ L Y+V M G+D+ C ++
Sbjct: 72 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQ 130
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
+Y Q+L L+Y H DIIHRD+KP LA E+ +K+ FG+A
Sbjct: 131 FLIY----------QILRGLKYIHSADIIHRDLKPSN--LAVNEDCE-LKILDFGLA--- 174
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIW 209
H + + T Y APE++ + Y + VDIW
Sbjct: 175 -------------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 209
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 42/168 (25%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDI-----CFEIVRRATA 102
RE + +KH +V+ LL+ ++ L Y+V M G+D+ C ++
Sbjct: 72 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQ 130
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
+Y Q+L L+Y H DIIHRD+KP LA E+ +K+ FG+A
Sbjct: 131 FLIY----------QILRGLKYIHSADIIHRDLKPSN--LAVNED-CELKILDFGLA--- 174
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIW 209
H + + T Y APE++ + Y + VDIW
Sbjct: 175 -------------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 209
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 73/163 (44%), Gaps = 32/163 (19%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDICFEIVRRATAGFVYS 107
RE + +KH +V+ LL+ ++ L Y+V M G+D+ IV+ +
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLN-NIVKXQK----LT 123
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQL 167
+ + Q+L L+Y H DIIHRD+KP LA E+ +K+ FG+A
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSN--LAVNEDCE-LKILDFGLA-------- 172
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIW 209
H + + T Y APE++ + Y + VDIW
Sbjct: 173 --------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 207
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 42/168 (25%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDI-----CFEIVRRATA 102
RE + +KH +V+ LL+ ++ L Y+V M G+D+ C ++
Sbjct: 76 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQ 134
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
+Y Q+L L+Y H DIIHRD+KP LA E+ +K+ FG+A
Sbjct: 135 FLIY----------QILRGLKYIHSADIIHRDLKPSN--LAVNEDCE-LKILDFGLA--- 178
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIW 209
H + + T Y APE++ + Y + VDIW
Sbjct: 179 -------------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 213
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 42/168 (25%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDI-----CFEIVRRATA 102
RE + +KH +V+ LL+ ++ L Y+V M G+D+ C ++
Sbjct: 66 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQ 124
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
+Y Q+L L+Y H DIIHRD+KP LA E+ +K+ FG+A
Sbjct: 125 FLIY----------QILRGLKYIHSADIIHRDLKPSN--LAVNEDCE-LKILDFGLA--- 168
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIW 209
H + + T Y APE++ + Y + VDIW
Sbjct: 169 -------------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 203
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 42/168 (25%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDI-----CFEIVRRATA 102
RE + +KH +V+ LL+ ++ L Y+V M G+D+ C ++
Sbjct: 93 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQ 151
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
+Y Q+L L+Y H DIIHRD+KP LA E+ +K+ FG+A
Sbjct: 152 FLIY----------QILRGLKYIHSADIIHRDLKPSN--LAVNED-CELKILDFGLA--- 195
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIW 209
H + + T Y APE++ + Y + VDIW
Sbjct: 196 -------------RHTDDEMXGYVATRWYRAPEIMLNWMHYNQTVDIW 230
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 42/168 (25%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDI-----CFEIVRRATA 102
RE + +KH +V+ LL+ ++ L Y+V M G+D+ C ++
Sbjct: 80 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQ 138
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
+Y Q+L L+Y H DIIHRD+KP LA E+ +K+ FG+A
Sbjct: 139 FLIY----------QILRGLKYIHSADIIHRDLKPSN--LAVNEDCE-LKILDFGLA--- 182
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIW 209
H + + T Y APE++ + Y + VDIW
Sbjct: 183 -------------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 217
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 70/156 (44%), Gaps = 20/156 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYM-DGSDICFEIVRRATAGFVYSEAVASH 113
EA + L+H +V L + E +Y++ EYM +GS + F + +G +
Sbjct: 53 EANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDF---LKTPSGIKLTINKLLD 108
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Q+ E + + E + IHRD++ +L++ ++ K+ FG+A ++D
Sbjct: 109 MAAQIAEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLARLIED--------- 156
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+ YT + G + + APE I + D+W
Sbjct: 157 --NEYTAREGAKFPI-KWTAPEAINYGTFTIKSDVW 189
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 42/168 (25%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDI-----CFEIVRRATA 102
RE + +KH +V+ LL+ ++ L Y+V M G+D+ C ++
Sbjct: 90 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQ 148
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
+Y Q+L L+Y H DIIHRD+KP LA E+ +K+ FG+A
Sbjct: 149 FLIY----------QILRGLKYIHSADIIHRDLKPSN--LAVNEDCE-LKILDFGLA--- 192
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIW 209
H + + T Y APE++ + Y + VDIW
Sbjct: 193 -------------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 227
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 65/156 (41%), Gaps = 16/156 (10%)
Query: 55 EATICHMLKHPHVVELLET-YSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
E I HP+V+ LL SEG +V YM D+ +R T + +
Sbjct: 79 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR-NFIRNETHNPTVKDLIG-- 135
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
+ QV + ++Y +HRD+ +L K VK+ FG+A + D + Y
Sbjct: 136 FGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFT---VKVADFGLARDMYDKEYYS---- 188
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
K G ++ +MA E ++ QK+ D+W
Sbjct: 189 ----VHNKTGAKLPV-KWMALESLQTQKFTTKSDVW 219
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 65/156 (41%), Gaps = 16/156 (10%)
Query: 55 EATICHMLKHPHVVELLET-YSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
E I HP+V+ LL SEG +V YM D+ +R T + +
Sbjct: 81 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIG-- 137
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
+ QV + ++Y +HRD+ +L K VK+ FG+A + D + Y
Sbjct: 138 FGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFT---VKVADFGLARDMYDKEYYS---- 190
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
K G ++ +MA E ++ QK+ D+W
Sbjct: 191 ----VHNKTGAKLPV-KWMALESLQTQKFTTKSDVW 221
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 70/156 (44%), Gaps = 20/156 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYM-DGSDICFEIVRRATAGFVYSEAVASH 113
EA + L+H +V L + E +Y++ EYM +GS + F + +G +
Sbjct: 58 EANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDF---LKTPSGIKLTINKLLD 113
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Q+ E + + E + IHRD++ +L++ ++ K+ FG+A ++D
Sbjct: 114 MAAQIAEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLARLIED--------- 161
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+ YT + G + + APE I + D+W
Sbjct: 162 --NEYTAREGAKFPI-KWTAPEAINYGTFTIKSDVW 194
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 70/156 (44%), Gaps = 20/156 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYM-DGSDICFEIVRRATAGFVYSEAVASH 113
EA + L+H +V L + E +Y++ EYM +GS + F + +G +
Sbjct: 64 EANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDF---LKTPSGIKLTINKLLD 119
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Q+ E + + E + IHRD++ +L++ ++ K+ FG+A ++D
Sbjct: 120 MAAQIAEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLARLIED--------- 167
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+ YT + G + + APE I + D+W
Sbjct: 168 --NEYTAREGAKFPI-KWTAPEAINYGTFTIKSDVW 200
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 65/156 (41%), Gaps = 16/156 (10%)
Query: 55 EATICHMLKHPHVVELLET-YSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
E I HP+V+ LL SEG +V YM D+ +R T + +
Sbjct: 78 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIG-- 134
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
+ QV + ++Y +HRD+ +L K VK+ FG+A + D + Y
Sbjct: 135 FGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFT---VKVADFGLARDMYDKEYYS---- 187
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
K G ++ +MA E ++ QK+ D+W
Sbjct: 188 ----VHNKTGAKLPV-KWMALESLQTQKFTTKSDVW 218
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 84/204 (41%), Gaps = 41/204 (20%)
Query: 52 LKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDIC---------FEIVRRATA 102
K E + +H +++ L YS++ L +V ++ +GS + FE+++
Sbjct: 51 FKNEVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDI 109
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
RQ + + Y H IIHRD+K + + L VK+G FG+A +
Sbjct: 110 A------------RQTAQGMDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLATE- 153
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQK---YGKPVDIWXXXXXXXXXX 219
+ SG + + + G+ +MAPEVI Q Y D++
Sbjct: 154 ---KSRWSGSHQFEQLS-------GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM 203
Query: 220 XXXXPF--VGSRDRLFQSITKGKL 241
P+ + +RD++ + +G L
Sbjct: 204 TGQLPYSNINNRDQIIFMVGRGYL 227
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 84/204 (41%), Gaps = 41/204 (20%)
Query: 52 LKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDIC---------FEIVRRATA 102
K E + +H +++ L YS++ L +V ++ +GS + FE+++
Sbjct: 71 FKNEVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDI 129
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
RQ + + Y H IIHRD+K + + L VK+G FG+A +
Sbjct: 130 A------------RQTAQGMDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLATE- 173
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQK---YGKPVDIWXXXXXXXXXX 219
+ SG + + + G+ +MAPEVI Q Y D++
Sbjct: 174 ---KSRWSGSHQFEQLS-------GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM 223
Query: 220 XXXXPF--VGSRDRLFQSITKGKL 241
P+ + +RD++ + +G L
Sbjct: 224 TGQLPYSNINNRDQIIFMVGRGYL 247
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 65/156 (41%), Gaps = 16/156 (10%)
Query: 55 EATICHMLKHPHVVELLET-YSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
E I HP+V+ LL SEG +V YM D+ +R T + +
Sbjct: 80 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIG-- 136
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
+ QV + ++Y +HRD+ +L K VK+ FG+A + D + Y
Sbjct: 137 FGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFT---VKVADFGLARDMYDKEYYS---- 189
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
K G ++ +MA E ++ QK+ D+W
Sbjct: 190 ----VHNKTGAKLPV-KWMALESLQTQKFTTKSDVW 220
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 70/156 (44%), Gaps = 20/156 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYM-DGSDICFEIVRRATAGFVYSEAVASH 113
EA + L+H +V L + E +Y++ EYM +GS + F + +G +
Sbjct: 63 EANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDF---LKTPSGIKLTINKLLD 118
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Q+ E + + E + IHRD++ +L++ ++ K+ FG+A ++D
Sbjct: 119 MAAQIAEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLARLIED--------- 166
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+ YT + G + + APE I + D+W
Sbjct: 167 --NEYTAREGAKFPI-KWTAPEAINYGTFTIKSDVW 199
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 65/156 (41%), Gaps = 16/156 (10%)
Query: 55 EATICHMLKHPHVVELLET-YSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
E I HP+V+ LL SEG +V YM D+ +R T + +
Sbjct: 100 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIG-- 156
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
+ QV + ++Y +HRD+ +L K VK+ FG+A + D + Y
Sbjct: 157 FGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFT---VKVADFGLARDMYDKEYYS---- 209
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
K G ++ +MA E ++ QK+ D+W
Sbjct: 210 ----VHNKTGAKLPV-KWMALESLQTQKFTTKSDVW 240
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 72/168 (42%), Gaps = 42/168 (25%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDI-----CFEIVRRATA 102
RE + +KH +V+ LL+ ++ L Y+V M G+D+ C ++
Sbjct: 89 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQ 147
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
+Y Q+L L+Y H DIIHRD+KP LA E+ +K+ FG+A
Sbjct: 148 FLIY----------QILRGLKYIHSADIIHRDLKPSN--LAVNEDCE-LKILDFGLA--- 191
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIW 209
H + + T Y APE++ + Y + VDIW
Sbjct: 192 -------------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 226
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 74/168 (44%), Gaps = 29/168 (17%)
Query: 49 EADLKREATICHM-----LKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAG 103
E++ +R+A I + + HP++V+L + + +V EY +G + + ++ A
Sbjct: 40 ESESERKAFIVELRQLSRVNHPNIVKLYGACLNP--VCLVMEYAEGGSL-YNVLHGAEPL 96
Query: 104 FVYSEAVASHYMRQVLEALRYCHE---NDIIHRDIKPHCVLLANKENSAPVKLGGFGVAI 160
Y+ A A + Q + + Y H +IHRD+KP +LL +K+ FG A
Sbjct: 97 PYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLV--AGGTVLKICDFGTAC 154
Query: 161 QLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDI 208
+Q T + G+ +MAPEV E Y + D+
Sbjct: 155 DIQ----------------THMTNNKGSAAWMAPEVFEGSNYSEKCDV 186
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 65/156 (41%), Gaps = 16/156 (10%)
Query: 55 EATICHMLKHPHVVELLET-YSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
E I HP+V+ LL SEG +V YM D+ +R T + +
Sbjct: 73 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIG-- 129
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
+ QV + ++Y +HRD+ +L K VK+ FG+A + D + Y
Sbjct: 130 FGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFT---VKVADFGLARDMYDKEYYS---- 182
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
K G ++ +MA E ++ QK+ D+W
Sbjct: 183 ----VHNKTGAKLPV-KWMALESLQTQKFTTKSDVW 213
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 70/156 (44%), Gaps = 20/156 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYM-DGSDICFEIVRRATAGFVYSEAVASH 113
EA + L+H +V L + E +Y++ EYM +GS + F + +G +
Sbjct: 68 EANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDF---LKTPSGIKLTINKLLD 123
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Q+ E + + E + IHRD++ +L++ ++ K+ FG+A ++D
Sbjct: 124 MAAQIAEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLARLIED--------- 171
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+ YT + G + + APE I + D+W
Sbjct: 172 --NEYTAREGAKFPI-KWTAPEAINYGTFTIKSDVW 204
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 65/156 (41%), Gaps = 16/156 (10%)
Query: 55 EATICHMLKHPHVVELLET-YSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
E I HP+V+ LL SEG +V YM D+ +R T + +
Sbjct: 81 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIG-- 137
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
+ QV + ++Y +HRD+ +L K VK+ FG+A + D + Y
Sbjct: 138 FGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFT---VKVADFGLARDMYDKEYYS---- 190
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
K G ++ +MA E ++ QK+ D+W
Sbjct: 191 ----VHNKTGAKLPV-KWMALESLQTQKFTTKSDVW 221
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 65/156 (41%), Gaps = 16/156 (10%)
Query: 55 EATICHMLKHPHVVELLET-YSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
E I HP+V+ LL SEG +V YM D+ +R T + +
Sbjct: 76 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIG-- 132
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
+ QV + ++Y +HRD+ +L K VK+ FG+A + D + Y
Sbjct: 133 FGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFT---VKVADFGLARDMYDKEYYS---- 185
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
K G ++ +MA E ++ QK+ D+W
Sbjct: 186 ----VHNKTGAKLPV-KWMALESLQTQKFTTKSDVW 216
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 84/204 (41%), Gaps = 41/204 (20%)
Query: 52 LKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDIC---------FEIVRRATA 102
K E + +H +++ L YS++ L +V ++ +GS + FE+++
Sbjct: 79 FKNEVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDI 137
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
RQ + + Y H IIHRD+K + + L VK+G FG+A +
Sbjct: 138 A------------RQTAQGMDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLATE- 181
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQK---YGKPVDIWXXXXXXXXXX 219
+ SG + + + G+ +MAPEVI Q Y D++
Sbjct: 182 ---KSRWSGSHQFEQLS-------GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM 231
Query: 220 XXXXPF--VGSRDRLFQSITKGKL 241
P+ + +RD++ + +G L
Sbjct: 232 TGQLPYSNINNRDQIIFMVGRGYL 255
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 67/159 (42%), Gaps = 16/159 (10%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
D EA+I HP+++ L + + +V EYM+ + +R F + V
Sbjct: 96 DFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLD-TFLRTHDGQFTIMQLV 154
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCS 170
+R V +RY + +HRD+ VL+ +++ K+ FG++ L+D
Sbjct: 155 G--MLRGVGAGMRYLSDLGYVHRDLAARNVLV---DSNLVCKVSDFGLSRVLEDDP---- 205
Query: 171 GGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
D T G +I + APE I + + D+W
Sbjct: 206 -----DAAXTTTGGKIPI-RWTAPEAIAFRTFSSASDVW 238
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 74/168 (44%), Gaps = 29/168 (17%)
Query: 49 EADLKREATICHM-----LKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAG 103
E++ +R+A I + + HP++V+L + + +V EY +G + + ++ A
Sbjct: 41 ESESERKAFIVELRQLSRVNHPNIVKLYGACLNP--VCLVMEYAEGGSL-YNVLHGAEPL 97
Query: 104 FVYSEAVASHYMRQVLEALRYCHE---NDIIHRDIKPHCVLLANKENSAPVKLGGFGVAI 160
Y+ A A + Q + + Y H +IHRD+KP +LL +K+ FG A
Sbjct: 98 PYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLV--AGGTVLKICDFGTAC 155
Query: 161 QLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDI 208
+Q T + G+ +MAPEV E Y + D+
Sbjct: 156 DIQ----------------THMTNNKGSAAWMAPEVFEGSNYSEKCDV 187
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 65/156 (41%), Gaps = 16/156 (10%)
Query: 55 EATICHMLKHPHVVELLET-YSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
E I HP+V+ LL SEG +V YM D+ +R T + +
Sbjct: 86 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR-NFIRNETHNPTVKDLIG-- 142
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
+ QV + +++ +HRD+ +L K VK+ FG+A + D +
Sbjct: 143 FGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFT---VKVADFGLARDMYD--------K 191
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
D K G ++ +MA E ++ QK+ D+W
Sbjct: 192 EFDSVHNKTGAKLPV-KWMALESLQTQKFTTKSDVW 226
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 65/156 (41%), Gaps = 16/156 (10%)
Query: 55 EATICHMLKHPHVVELLET-YSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
E I HP+V+ LL SEG +V YM D+ +R T + +
Sbjct: 82 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR-NFIRNETHNPTVKDLIG-- 138
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
+ QV + +++ +HRD+ +L K VK+ FG+A + D +
Sbjct: 139 FGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFT---VKVADFGLARDMYD--------K 187
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
D K G ++ +MA E ++ QK+ D+W
Sbjct: 188 EFDSVHNKTGAKLPV-KWMALESLQTQKFTTKSDVW 222
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 72/173 (41%), Gaps = 19/173 (10%)
Query: 41 ERLNHYTTEADLKR---EATICHMLKHPHVVELLET-YSSEGMLYMVFEYMDGSDICFEI 96
+ LN T ++ + E I HP+V+ LL SEG +V YM D+
Sbjct: 123 KSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL-RNF 181
Query: 97 VRRATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGF 156
+R T + + + QV + +++ +HRD+ +L K VK+ F
Sbjct: 182 IRNETHNPTVKDLIG--FGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFT---VKVADF 236
Query: 157 GVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
G+A + D + D K G ++ +MA E ++ QK+ D+W
Sbjct: 237 GLARDMYD--------KEFDSVHNKTGAKLPV-KWMALESLQTQKFTTKSDVW 280
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 65/156 (41%), Gaps = 16/156 (10%)
Query: 55 EATICHMLKHPHVVELLET-YSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
E I HP+V+ LL SEG +V YM D+ +R T + +
Sbjct: 81 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR-NFIRNETHNPTVKDLIG-- 137
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
+ QV + +++ +HRD+ +L K VK+ FG+A + D +
Sbjct: 138 FGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFT---VKVADFGLARDMYD--------K 186
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
D K G ++ +MA E ++ QK+ D+W
Sbjct: 187 EFDSVHNKTGAKLPV-KWMALESLQTQKFTTKSDVW 221
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 71/171 (41%), Gaps = 23/171 (13%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML-----YMVFEYMDGSDICFEIVRRATAGFVYSE 108
RE TI + LK +++ L + + +L Y+V E D ++ + +E
Sbjct: 74 REITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADS-----DLKKLFKTPIFLTE 128
Query: 109 AVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL------ 162
+ +L + HE+ IIHRD+KP LL VK+ FG+A +
Sbjct: 129 EHIKTILYNLLLGENFIHESGIIHRDLKPANCLL---NQDCSVKVCDFGLARTINSEKDT 185
Query: 163 ---QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
D + G + + + T Y APE+I Q+ Y K +DIW
Sbjct: 186 NIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIW 236
Score = 30.4 bits (67), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 17/22 (77%)
Query: 1 MLSVDPNKRITIHEVINHKWLK 22
ML +PNKRITI + ++H +LK
Sbjct: 345 MLKFNPNKRITIDQALDHPYLK 366
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 73/167 (43%), Gaps = 23/167 (13%)
Query: 44 NHYTTEADLKREATICHMLKHPHVVELLETYSSE-GMLYMVFEYMDGSDICFEIVRRATA 102
N T +A L EA++ L+H ++V+LL E G LY+V EYM + + R +
Sbjct: 45 NDATAQAFLA-EASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRS 103
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
V + V EA+ Y N+ +HRD+ VL++ ++N A K+ FG+ +
Sbjct: 104 --VLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVS-EDNVA--KVSDFGLTKEA 158
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
Q G+ +T APE + + + D+W
Sbjct: 159 SSTQ---DTGKLPVKWT-------------APEALREAAFSTKSDVW 189
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 30/162 (18%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDICFEIVRRATAGFVYS 107
RE + + H +++ LL ++ + L Y+V E MD +++C ++++
Sbjct: 74 RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD-ANLC-QVIQMEL-----D 126
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQL 167
S+ + Q+L +++ H IIHRD+KP +++ ++ +K+ FG+A
Sbjct: 127 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLA-------- 175
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
R + + T +Y APEVI Y + VDIW
Sbjct: 176 ------RTAGTSFMMVPFVVTRYYRAPEVILGMGYKENVDIW 211
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 65/156 (41%), Gaps = 16/156 (10%)
Query: 55 EATICHMLKHPHVVELLET-YSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
E I HP+V+ LL SEG +V YM D+ +R T + +
Sbjct: 82 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR-NFIRNETHNPTVKDLIG-- 138
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
+ QV + +++ +HRD+ +L K VK+ FG+A + D +
Sbjct: 139 FGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFT---VKVADFGLARDMLD--------K 187
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
D K G ++ +MA E ++ QK+ D+W
Sbjct: 188 EFDSVHNKTGAKLPV-KWMALESLQTQKFTTKSDVW 222
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 63/161 (39%), Gaps = 17/161 (10%)
Query: 49 EADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSE 108
+A +EA I HP++V L+ + + +Y+V E + G D +R T G
Sbjct: 156 KAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF-LTFLR--TEGARLRV 212
Query: 109 AVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLY 168
+ + Y IHRD+ L+ K +K+ FG++ + DG
Sbjct: 213 KTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNV---LKISDFGMSREEADGVXA 269
Query: 169 CSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
SGG L K + APE + +Y D+W
Sbjct: 270 ASGG--LRQVPVK---------WTAPEALNYGRYSSESDVW 299
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 65/156 (41%), Gaps = 16/156 (10%)
Query: 55 EATICHMLKHPHVVELLET-YSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
E I HP+V+ LL SEG +V YM D+ +R T + +
Sbjct: 81 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR-NFIRNETHNPTVKDLIG-- 137
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
+ QV + +++ +HRD+ +L K VK+ FG+A + D +
Sbjct: 138 FGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFT---VKVADFGLARDMYD--------K 186
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
D K G ++ +MA E ++ QK+ D+W
Sbjct: 187 EFDSVHNKTGAKLPV-KWMALESLQTQKFTTKSDVW 221
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 65/156 (41%), Gaps = 16/156 (10%)
Query: 55 EATICHMLKHPHVVELLET-YSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
E I HP+V+ LL SEG +V YM D+ +R T + +
Sbjct: 79 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLR-NFIRNETHNPTVKDLIG-- 135
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
+ QV + +++ +HRD+ +L K VK+ FG+A + D +
Sbjct: 136 FGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFT---VKVADFGLARDMYD--------K 184
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
D K G ++ +MA E ++ QK+ D+W
Sbjct: 185 EFDSVHNKTGAKLPV-KWMALESLQTQKFTTKSDVW 219
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 75/162 (46%), Gaps = 30/162 (18%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDICFEIVRRATAGFVYS 107
RE + + H +++ LL ++ + L Y+V E MD +++C ++++
Sbjct: 72 RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD-ANLC-QVIQMEL-----D 124
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQL 167
S+ + Q+L +++ H IIHRD+KP +++ ++ +K+ FG+A
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLA-------- 173
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
R + + T +Y APEVI Y + VD+W
Sbjct: 174 ------RTAGTSFMMEPEVVTRYYRAPEVILGMGYKENVDLW 209
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 63/161 (39%), Gaps = 17/161 (10%)
Query: 49 EADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSE 108
+A +EA I HP++V L+ + + +Y+V E + G D +R T G
Sbjct: 156 KAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF-LTFLR--TEGARLRV 212
Query: 109 AVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLY 168
+ + Y IHRD+ L+ K +K+ FG++ + DG
Sbjct: 213 KTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNV---LKISDFGMSREEADGVYA 269
Query: 169 CSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
SGG L K + APE + +Y D+W
Sbjct: 270 ASGG--LRQVPVK---------WTAPEALNYGRYSSESDVW 299
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 75/162 (46%), Gaps = 30/162 (18%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDICFEIVRRATAGFVYS 107
RE + + H +++ LL ++ + L Y+V E MD +++C ++++
Sbjct: 77 RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD-ANLC-QVIQMEL-----D 129
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQL 167
S+ + Q+L +++ H IIHRD+KP +++ ++ +K+ FG+A
Sbjct: 130 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLA-------- 178
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
R + + T +Y APEVI Y + VD+W
Sbjct: 179 ------RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLW 214
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 63/134 (47%), Gaps = 22/134 (16%)
Query: 65 PHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEALRY 124
P +V + + + L + + M+G D+ + + + V+SEA Y +++ L +
Sbjct: 252 PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG----VFSEADMRFYAAEIILGLEH 307
Query: 125 CHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGH 184
H +++RD+KP +LL + V++ G+A C ++ H +
Sbjct: 308 MHNRFVVYRDLKPANILL---DEHGHVRISDLGLA---------CDFSKKKPHAS----- 350
Query: 185 RIGTPHYMAPEVIE 198
+GT YMAPEV++
Sbjct: 351 -VGTHGYMAPEVLQ 363
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 63/134 (47%), Gaps = 22/134 (16%)
Query: 65 PHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEALRY 124
P +V + + + L + + M+G D+ + + + V+SEA Y +++ L +
Sbjct: 252 PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG----VFSEADMRFYAAEIILGLEH 307
Query: 125 CHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGH 184
H +++RD+KP +LL + V++ G+A C ++ H +
Sbjct: 308 MHNRFVVYRDLKPANILL---DEHGHVRISDLGLA---------CDFSKKKPHAS----- 350
Query: 185 RIGTPHYMAPEVIE 198
+GT YMAPEV++
Sbjct: 351 -VGTHGYMAPEVLQ 363
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 63/134 (47%), Gaps = 22/134 (16%)
Query: 65 PHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEALRY 124
P +V + + + L + + M+G D+ + + + V+SEA Y +++ L +
Sbjct: 252 PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG----VFSEADMRFYAAEIILGLEH 307
Query: 125 CHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGH 184
H +++RD+KP +LL + V++ G+A C ++ H +
Sbjct: 308 MHNRFVVYRDLKPANILL---DEHGHVRISDLGLA---------CDFSKKKPHAS----- 350
Query: 185 RIGTPHYMAPEVIE 198
+GT YMAPEV++
Sbjct: 351 -VGTHGYMAPEVLQ 363
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 63/134 (47%), Gaps = 22/134 (16%)
Query: 65 PHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEALRY 124
P +V + + + L + + M+G D+ + + + V+SEA Y +++ L +
Sbjct: 251 PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHG----VFSEADMRFYAAEIILGLEH 306
Query: 125 CHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGH 184
H +++RD+KP +LL + V++ G+A C ++ H +
Sbjct: 307 MHNRFVVYRDLKPANILL---DEHGHVRISDLGLA---------CDFSKKKPHAS----- 349
Query: 185 RIGTPHYMAPEVIE 198
+GT YMAPEV++
Sbjct: 350 -VGTHGYMAPEVLQ 362
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 75/162 (46%), Gaps = 30/162 (18%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDICFEIVRRATAGFVYS 107
RE + + H +++ LL ++ + L Y+V E MD +++C ++++
Sbjct: 66 RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMD-ANLC-QVIQMEL-----D 118
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQL 167
S+ + Q+L +++ H IIHRD+KP +++ ++ +K+ FG+A
Sbjct: 119 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLA-------- 167
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
R + + T +Y APEVI Y + VD+W
Sbjct: 168 ------RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLW 203
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 15/86 (17%)
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y + +LEA+ H++ I+H D+KP L+ + +KL FG+A Q+Q
Sbjct: 160 YWKNMLEAVHTIHQHGIVHSDLKPANFLIVD----GMLKLIDFGIANQMQP--------- 206
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIED 199
D + ++GT +YM PE I+D
Sbjct: 207 --DTTSVVKDSQVGTVNYMPPEAIKD 230
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 71/161 (44%), Gaps = 20/161 (12%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
D EA+I HP+++ L + + +V E M+ + +R+ A F + V
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLD-SFLRKHDAQFTVIQLV 150
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPV-KLGGFGVAIQLQDGQLYC 169
+R + ++Y + +HRD+ +L+ NS V K+ FG++ L+D
Sbjct: 151 G--MLRGIASGMKYLSDMGAVHRDLAARNILI----NSNLVCKVSDFGLSRVLED----- 199
Query: 170 SGGERLDHYTTKAGHRIGTP-HYMAPEVIEDQKYGKPVDIW 209
+ YTT+ G P + +PE I +K+ D+W
Sbjct: 200 ---DPEAAYTTRGGK---IPIRWTSPEAIAYRKFTSASDVW 234
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 15/86 (17%)
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y + +LEA+ H++ I+H D+KP L+ + +KL FG+A Q+Q
Sbjct: 113 YWKNMLEAVHTIHQHGIVHSDLKPANFLIVD----GMLKLIDFGIANQMQP--------- 159
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIED 199
D + ++GT +YM PE I+D
Sbjct: 160 --DTTSVVKDSQVGTVNYMPPEAIKD 183
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 67/159 (42%), Gaps = 16/159 (10%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
D EA+I HP+++ L + + +V EYM+ + +R F + V
Sbjct: 96 DFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLD-TFLRTHDGQFTIMQLV 154
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCS 170
+R V +RY + +HRD+ VL+ +++ K+ FG++ L+D
Sbjct: 155 G--MLRGVGAGMRYLSDLGYVHRDLAARNVLV---DSNLVCKVSDFGLSRVLEDDP---- 205
Query: 171 GGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
D T G +I + APE I + + D+W
Sbjct: 206 -----DAAYTTTGGKIPI-RWTAPEAIAFRTFSSASDVW 238
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 15/86 (17%)
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y + +LEA+ H++ I+H D+KP L+ + +KL FG+A Q+Q
Sbjct: 132 YWKNMLEAVHTIHQHGIVHSDLKPANFLIVD----GMLKLIDFGIANQMQP--------- 178
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIED 199
D + ++GT +YM PE I+D
Sbjct: 179 --DTTSVVKDSQVGTVNYMPPEAIKD 202
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 72/162 (44%), Gaps = 30/162 (18%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDICFEIVRRATAGFVYS 107
RE + + H +++ LL ++ + L Y+V E MD + ++++
Sbjct: 72 RELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQMEL-----D 124
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQL 167
S+ + Q+L +++ H IIHRD+KP +++ ++ +K+ FG+A
Sbjct: 125 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLA-------- 173
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
R + + T +Y APEVI Y + VDIW
Sbjct: 174 ------RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIW 209
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 15/86 (17%)
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y + +LEA+ H++ I+H D+KP L+ + +KL FG+A Q+Q
Sbjct: 160 YWKNMLEAVHTIHQHGIVHSDLKPANFLIVD----GMLKLIDFGIANQMQP--------- 206
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIED 199
D + ++GT +YM PE I+D
Sbjct: 207 --DTTSVVKDSQVGTVNYMPPEAIKD 230
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 72/174 (41%), Gaps = 26/174 (14%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML-----YMVFEYMDGSDICFEIVRRATAGFVYSE 108
RE TI + LK +++ L + E +L Y+V E D ++ + +E
Sbjct: 76 REITILNRLKSDYIIRLHDLIIPEDLLKFDELYIVLEIADS-----DLKKLFKTPIFLTE 130
Query: 109 AVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQ-DGQL 167
+ +L ++ HE+ IIHRD+KP LL VK+ FG+A + D +
Sbjct: 131 QHVKTILYNLLLGEKFIHESGIIHRDLKPANCLL---NQDCSVKICDFGLARTINSDKDI 187
Query: 168 YCSG-----------GERLDHYTTKAGHRIGTPHYMAPEVIEDQK-YGKPVDIW 209
+ G + + + T Y APE+I Q+ Y +DIW
Sbjct: 188 HIVNDLEEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIW 241
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 72/168 (42%), Gaps = 42/168 (25%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDI-----CFEIVRRATA 102
RE + +KH +V+ LL+ ++ L Y+V M G+D+ C ++
Sbjct: 99 RELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQ 157
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
+Y Q+L L+Y H DIIHRD+KP LA E+ +K+ FG+A
Sbjct: 158 FLIY----------QILRGLKYIHSADIIHRDLKPSN--LAVNEDCE-LKILDFGLARHT 204
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIW 209
D G+ + T Y APE++ + Y VDIW
Sbjct: 205 DDEM---------------TGY-VATRWYRAPEIMLNWMHYNMTVDIW 236
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 72/168 (42%), Gaps = 42/168 (25%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDI-----CFEIVRRATA 102
RE + +KH +V+ LL+ ++ L Y+V M G+D+ C ++
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQ 128
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
+Y Q+L L+Y H DIIHRD+KP LA E+ +++
Sbjct: 129 FLIY----------QILRGLKYIHSADIIHRDLKPSN--LAVNED----------CELKI 166
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIW 209
DG L + + Y + T Y APE++ + Y + VDIW
Sbjct: 167 LDGGLARHTDDEMTGY-------VATRWYRAPEIMLNWMHYNQTVDIW 207
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 15/86 (17%)
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y + +LEA+ H++ I+H D+KP L+ + +KL FG+A Q+Q
Sbjct: 116 YWKNMLEAVHTIHQHGIVHSDLKPANFLIVD----GMLKLIDFGIANQMQP--------- 162
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIED 199
D + ++GT +YM PE I+D
Sbjct: 163 --DTTSVVKDSQVGTVNYMPPEAIKD 186
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 74/167 (44%), Gaps = 40/167 (23%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDICFEIVRRATAGFVYS 107
RE + LKH +V+ LL+ ++ + Y+V M G+D+ V
Sbjct: 68 RELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM-GADL---------NNIVKC 117
Query: 108 EAVASHYMR----QVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQ 163
+A++ +++ Q+L L+Y H IIHRD+KP V + +++ FG+A Q
Sbjct: 118 QALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAV---NEDCELRILDFGLARQ-- 172
Query: 164 DGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIW 209
E + Y + T Y APE++ + Y + VDIW
Sbjct: 173 -------ADEEMTGY-------VATRWYRAPEIMLNWMHYNQTVDIW 205
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 15/86 (17%)
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y + +LEA+ H++ I+H D+KP L+ + +KL FG+A Q+Q
Sbjct: 112 YWKNMLEAVHTIHQHGIVHSDLKPANFLIVD----GMLKLIDFGIANQMQP--------- 158
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIED 199
D + ++GT +YM PE I+D
Sbjct: 159 --DTTSVVKDSQVGTVNYMPPEAIKD 182
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 71/161 (44%), Gaps = 20/161 (12%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
D EA+I HP+++ L + + +V E M+ + +R+ A F + V
Sbjct: 63 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLD-SFLRKHDAQFTVIQLV 121
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPV-KLGGFGVAIQLQDGQLYC 169
+R + ++Y + +HRD+ +L+ NS V K+ FG++ L+D
Sbjct: 122 G--MLRGIASGMKYLSDMGYVHRDLAARNILI----NSNLVCKVSDFGLSRVLED----- 170
Query: 170 SGGERLDHYTTKAGHRIGTP-HYMAPEVIEDQKYGKPVDIW 209
+ YTT+ G P + +PE I +K+ D+W
Sbjct: 171 ---DPEAAYTTRGGK---IPIRWTSPEAIAYRKFTSASDVW 205
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 73/162 (45%), Gaps = 22/162 (13%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYM-DGSDICFEIVRRATAGFVYSEA 109
D EA+I HP+++ L + + ++ EYM +GS F +R+ F +
Sbjct: 76 DFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAF--LRKNDGRFTVIQL 133
Query: 110 VASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPV-KLGGFGVAIQLQDGQLY 168
V +R + ++Y + +HRD+ +L+ NS V K+ FG++ L+D
Sbjct: 134 VG--MLRGIGSGMKYLSDMSAVHRDLAARNILV----NSNLVCKVSDFGMSRVLED---- 183
Query: 169 CSGGERLDHYTTKAGHRIGTP-HYMAPEVIEDQKYGKPVDIW 209
+ YTT+ G P + APE I +K+ D+W
Sbjct: 184 ----DPEAAYTTRGGK---IPIRWTAPEAIAYRKFTSASDVW 218
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 71/161 (44%), Gaps = 20/161 (12%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
D EA+I HP+++ L + + +V E M+ + +R+ A F + V
Sbjct: 92 DFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLD-SFLRKHDAQFTVIQLV 150
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPV-KLGGFGVAIQLQDGQLYC 169
+R + ++Y + +HRD+ +L+ NS V K+ FG++ L+D
Sbjct: 151 G--MLRGIASGMKYLSDMGYVHRDLAARNILI----NSNLVCKVSDFGLSRVLED----- 199
Query: 170 SGGERLDHYTTKAGHRIGTP-HYMAPEVIEDQKYGKPVDIW 209
+ YTT+ G P + +PE I +K+ D+W
Sbjct: 200 ---DPEAAYTTRGGK---IPIRWTSPEAIAYRKFTSASDVW 234
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 72/168 (42%), Gaps = 42/168 (25%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDI-----CFEIVRRATA 102
RE + +KH +V+ LL+ ++ L Y+V M G+D+ C ++
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQ 128
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
+Y Q+L L+Y H DIIHRD+KP LA E+ +K+ +G+A
Sbjct: 129 FLIY----------QILRGLKYIHSADIIHRDLKPSN--LAVNEDCE-LKILDYGLA--- 172
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIW 209
H + + T Y APE++ + Y + VDIW
Sbjct: 173 -------------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 207
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 72/160 (45%), Gaps = 16/160 (10%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
D EA+I HP+V+ L + + ++ E+M+ + +R+ F + V
Sbjct: 54 DFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLD-SFLRQNDGQFTVIQLV 112
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPV-KLGGFGVAIQLQDGQLYC 169
+R + ++Y + + +HR + +L+ NS V K+ FG++ L+D
Sbjct: 113 G--MLRGIAAGMKYLADMNYVHRALAARNILV----NSNLVCKVSDFGLSRFLEDDTSDP 166
Query: 170 SGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+ YT+ G +I + APE I+ +K+ D+W
Sbjct: 167 T-------YTSALGGKIPI-RWTAPEAIQYRKFTSASDVW 198
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 15/86 (17%)
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y + +LEA+ H++ I+H D+KP L+ + +KL FG+A Q+Q
Sbjct: 132 YWKNMLEAVHTIHQHGIVHSDLKPANFLIVD----GMLKLIDFGIANQMQP--------- 178
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIED 199
D ++GT +YM PE I+D
Sbjct: 179 --DXXXVVKDSQVGTVNYMPPEAIKD 202
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 83/204 (40%), Gaps = 41/204 (20%)
Query: 52 LKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDIC---------FEIVRRATA 102
K E + +H +++ L YS++ L +V ++ +GS + FE+++
Sbjct: 56 FKNEVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDI 114
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
RQ + + Y H IIHRD+K + + L VK+G FG+A
Sbjct: 115 A------------RQTAQGMDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLATV- 158
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQK---YGKPVDIWXXXXXXXXXX 219
+ SG + + + G+ +MAPEVI Q Y D++
Sbjct: 159 ---KSRWSGSHQFEQLS-------GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM 208
Query: 220 XXXXPF--VGSRDRLFQSITKGKL 241
P+ + +RD++ + +G L
Sbjct: 209 TGQLPYSNINNRDQIIFMVGRGYL 232
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 71/161 (44%), Gaps = 20/161 (12%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
D EA+I HP+++ L + + +V EYM+ + +++ F + V
Sbjct: 69 DFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLD-TFLKKNDGQFTVIQLV 127
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPV-KLGGFGVAIQLQDGQLYC 169
+R + ++Y + +HRD+ +L+ NS V K+ FG++ L+D
Sbjct: 128 G--MLRGISAGMKYLSDMGYVHRDLAARNILI----NSNLVCKVSDFGLSRVLED----- 176
Query: 170 SGGERLDHYTTKAGHRIGTP-HYMAPEVIEDQKYGKPVDIW 209
+ YTT+ G P + APE I +K+ D+W
Sbjct: 177 ---DPEAAYTTRGGK---IPIRWTAPEAIAFRKFTSASDVW 211
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 83/204 (40%), Gaps = 41/204 (20%)
Query: 52 LKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDIC---------FEIVRRATA 102
K E + +H +++ L YS++ L +V ++ +GS + FE+++
Sbjct: 56 FKNEVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDI 114
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
RQ + + Y H IIHRD+K + + L VK+G FG+A
Sbjct: 115 A------------RQTAQGMDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLATV- 158
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQK---YGKPVDIWXXXXXXXXXX 219
+ SG + + + G+ +MAPEVI Q Y D++
Sbjct: 159 ---KSRWSGSHQFEQLS-------GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM 208
Query: 220 XXXXPF--VGSRDRLFQSITKGKL 241
P+ + +RD++ + +G L
Sbjct: 209 TGQLPYSNINNRDQIIFMVGRGYL 232
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 83/204 (40%), Gaps = 41/204 (20%)
Query: 52 LKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDIC---------FEIVRRATA 102
K E + +H +++ L YS++ L +V ++ +GS + FE+++
Sbjct: 51 FKNEVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDI 109
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
RQ + + Y H IIHRD+K + + L VK+G FG+A
Sbjct: 110 A------------RQTAQGMDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLATV- 153
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQK---YGKPVDIWXXXXXXXXXX 219
+ SG + + + G+ +MAPEVI Q Y D++
Sbjct: 154 ---KSRWSGSHQFEQLS-------GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM 203
Query: 220 XXXXPF--VGSRDRLFQSITKGKL 241
P+ + +RD++ + +G L
Sbjct: 204 TGQLPYSNINNRDQIIFMVGRGYL 227
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 73/162 (45%), Gaps = 22/162 (13%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYM-DGSDICFEIVRRATAGFVYSEA 109
D EA+I HP+++ L + + ++ EYM +GS F +R+ F +
Sbjct: 61 DFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAF--LRKNDGRFTVIQL 118
Query: 110 VASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPV-KLGGFGVAIQLQDGQLY 168
V +R + ++Y + +HRD+ +L+ NS V K+ FG++ L+D
Sbjct: 119 VG--MLRGIGSGMKYLSDMSYVHRDLAARNILV----NSNLVCKVSDFGMSRVLED---- 168
Query: 169 CSGGERLDHYTTKAGHRIGTP-HYMAPEVIEDQKYGKPVDIW 209
+ YTT+ G P + APE I +K+ D+W
Sbjct: 169 ----DPEAAYTTRGGK---IPIRWTAPEAIAYRKFTSASDVW 203
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 83/204 (40%), Gaps = 41/204 (20%)
Query: 52 LKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDIC---------FEIVRRATA 102
K E + +H +++ L YS++ L +V ++ +GS + FE+++
Sbjct: 53 FKNEVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDI 111
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
RQ + + Y H IIHRD+K + + L VK+G FG+A
Sbjct: 112 A------------RQTAQGMDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLATV- 155
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQK---YGKPVDIWXXXXXXXXXX 219
+ SG + + + G+ +MAPEVI Q Y D++
Sbjct: 156 ---KSRWSGSHQFEQLS-------GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM 205
Query: 220 XXXXPF--VGSRDRLFQSITKGKL 241
P+ + +RD++ + +G L
Sbjct: 206 TGQLPYSNINNRDQIIFMVGRGYL 229
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 73/162 (45%), Gaps = 22/162 (13%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYM-DGSDICFEIVRRATAGFVYSEA 109
D EA+I HP+++ L + + ++ EYM +GS F +R+ F +
Sbjct: 55 DFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAF--LRKNDGRFTVIQL 112
Query: 110 VASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPV-KLGGFGVAIQLQDGQLY 168
V +R + ++Y + +HRD+ +L+ NS V K+ FG++ L+D
Sbjct: 113 VG--MLRGIGSGMKYLSDMSYVHRDLAARNILV----NSNLVCKVSDFGMSRVLED---- 162
Query: 169 CSGGERLDHYTTKAGHRIGTP-HYMAPEVIEDQKYGKPVDIW 209
+ YTT+ G P + APE I +K+ D+W
Sbjct: 163 ----DPEAAYTTRGGK---IPIRWTAPEAIAYRKFTSASDVW 197
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 83/178 (46%), Gaps = 32/178 (17%)
Query: 54 REATICHMLKHPHVVELLETYSSEGM-----LYMVFEYMDGSDICFEIVRRATAGFVY-S 107
RE I + L H HVV++L+ + + LY+V E D F+ + R VY +
Sbjct: 101 REIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSD---FKKLFRTP---VYLT 154
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKP-HCVLLANKENSAPVKLGGFGVAIQL---Q 163
E + +L ++Y H I+HRD+KP +C L N++ S VK+ FG+A + +
Sbjct: 155 ELHIKTLLYNLLVGVKYVHSAGILHRDLKPANC--LVNQDCS--VKVCDFGLARTVDYPE 210
Query: 164 DGQLYCSGGERLDHYT------TKAGHRIGTPH-----YMAPEVIEDQK-YGKPVDIW 209
+G R D TK R T H Y APE+I Q+ Y + +D+W
Sbjct: 211 NGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVW 268
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 12/22 (54%), Positives = 16/22 (72%)
Query: 1 MLSVDPNKRITIHEVINHKWLK 22
ML +PNKRITI+E + H + K
Sbjct: 380 MLVFNPNKRITINECLAHPFFK 401
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 83/204 (40%), Gaps = 41/204 (20%)
Query: 52 LKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDIC---------FEIVRRATA 102
K E + +H +++ L YS++ L +V ++ +GS + FE+++
Sbjct: 79 FKNEVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDI 137
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
RQ + + Y H IIHRD+K + + L VK+G FG+A
Sbjct: 138 A------------RQTAQGMDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLATV- 181
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQK---YGKPVDIWXXXXXXXXXX 219
+ SG + + + G+ +MAPEVI Q Y D++
Sbjct: 182 ---KSRWSGSHQFEQLS-------GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM 231
Query: 220 XXXXPF--VGSRDRLFQSITKGKL 241
P+ + +RD++ + +G L
Sbjct: 232 TGQLPYSNINNRDQIIFMVGRGYL 255
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 83/204 (40%), Gaps = 41/204 (20%)
Query: 52 LKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDIC---------FEIVRRATA 102
K E + +H +++ L YS++ L +V ++ +GS + FE+++
Sbjct: 78 FKNEVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDI 136
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
RQ + + Y H IIHRD+K + + L VK+G FG+A
Sbjct: 137 A------------RQTAQGMDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLATV- 180
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQK---YGKPVDIWXXXXXXXXXX 219
+ SG + + + G+ +MAPEVI Q Y D++
Sbjct: 181 ---KSRWSGSHQFEQLS-------GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM 230
Query: 220 XXXXPF--VGSRDRLFQSITKGKL 241
P+ + +RD++ + +G L
Sbjct: 231 TGQLPYSNINNRDQIIFMVGRGYL 254
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 27/173 (15%)
Query: 50 ADLKREATICHML-KHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYS- 107
+DL E + M+ KH +++ LL + +G LY++ EY ++ + R G +S
Sbjct: 78 SDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSF 137
Query: 108 -------EAVASHYM----RQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGF 156
E ++S + QV + Y IHRD+ VL+ E++ +K+ F
Sbjct: 138 NPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT--EDNV-MKIADF 194
Query: 157 GVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
G+A + +D R+ +MAPE + D+ Y D+W
Sbjct: 195 GLARDIH----------HIDXXKKTTNGRLPV-KWMAPEALFDRIYTHQSDVW 236
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 82/204 (40%), Gaps = 41/204 (20%)
Query: 52 LKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDIC---------FEIVRRATA 102
K E + +H +++ L YS+ L +V ++ +GS + FE+++
Sbjct: 51 FKNEVGVLRKTRHVNIL-LFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDI 109
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
RQ + + Y H IIHRD+K + + L VK+G FG+A
Sbjct: 110 A------------RQTAQGMDYLHAKSIIHRDLKSNNIFL---HEDLTVKIGDFGLATV- 153
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQK---YGKPVDIWXXXXXXXXXX 219
+ SG + + + G+ +MAPEVI Q Y D++
Sbjct: 154 ---KSRWSGSHQFEQLS-------GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM 203
Query: 220 XXXXPF--VGSRDRLFQSITKGKL 241
P+ + +RD++ + +G L
Sbjct: 204 TGQLPYSNINNRDQIIFMVGRGYL 227
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 65/162 (40%), Gaps = 18/162 (11%)
Query: 48 TEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYS 107
+E + +EA L HP +V+ S E +Y+V EY+ + +R G S
Sbjct: 46 SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCL-LNYLRSHGKGLEPS 104
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQL 167
+ + Y V E + + + IHRD+ L+ + VK+ FG+ + D
Sbjct: 105 QLLEMCY--DVCEGMAFLESHQFIHRDLAARNCLV---DRDLCVKVSDFGMTRYVLD--- 156
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
D Y + G + + APEV KY D+W
Sbjct: 157 --------DQYVSSVGTKFPV-KWSAPEVFHYFKYSSKSDVW 189
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 64/159 (40%), Gaps = 17/159 (10%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
D RE H L H +++ L + M MV E + + +R+ F+
Sbjct: 67 DFIREVNAMHSLDHRNLIRLYGVVLTPPM-KMVTELAPLGSL-LDRLRKHQGHFLL--GT 122
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCS 170
S Y QV E + Y IHRD+ +LLA ++ VK+G FG+ L
Sbjct: 123 LSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDL---VKIGDFGLMRALPQND---- 175
Query: 171 GGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
DHY + HR + APE ++ + + D W
Sbjct: 176 -----DHYVMQE-HRKVPFAWCAPESLKTRTFSHASDTW 208
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 64/159 (40%), Gaps = 17/159 (10%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
D RE H L H +++ L + M MV E + + +R+ F+
Sbjct: 61 DFIREVNAMHSLDHRNLIRLYGVVLTPPM-KMVTELAPLGSL-LDRLRKHQGHFLL--GT 116
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCS 170
S Y QV E + Y IHRD+ +LLA ++ VK+G FG+ L
Sbjct: 117 LSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDL---VKIGDFGLMRALPQND---- 169
Query: 171 GGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
DHY + HR + APE ++ + + D W
Sbjct: 170 -----DHYVMQE-HRKVPFAWCAPESLKTRTFSHASDTW 202
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 64/159 (40%), Gaps = 17/159 (10%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
D RE H L H +++ L + M MV E + + +R+ F+
Sbjct: 57 DFIREVNAMHSLDHRNLIRLYGVVLTPPM-KMVTELAPLGSL-LDRLRKHQGHFLL--GT 112
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCS 170
S Y QV E + Y IHRD+ +LLA ++ VK+G FG+ L
Sbjct: 113 LSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDL---VKIGDFGLMRALPQND---- 165
Query: 171 GGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
DHY + HR + APE ++ + + D W
Sbjct: 166 -----DHYVMQE-HRKVPFAWCAPESLKTRTFSHASDTW 198
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 67/162 (41%), Gaps = 18/162 (11%)
Query: 48 TEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYS 107
+E + EA + L H +V+L + + ++++ EYM + +R F
Sbjct: 62 SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM-ANGCLLNYLREMRHRFQTQ 120
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQL 167
+ + + V EA+ Y +HRD+ L+ ++ VK+ FG++ + D
Sbjct: 121 QLL--EMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQ---GVVKVSDFGLSRYVLD--- 172
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
D YT+ G + + PEV+ K+ DIW
Sbjct: 173 --------DEYTSSVGSKFPV-RWSPPEVLMYSKFSSKSDIW 205
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 64/159 (40%), Gaps = 17/159 (10%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
D RE H L H +++ L + M MV E + + +R+ F+
Sbjct: 57 DFIREVNAMHSLDHRNLIRLYGVVLTPPM-KMVTELAPLGSL-LDRLRKHQGHFLL--GT 112
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCS 170
S Y QV E + Y IHRD+ +LLA ++ VK+G FG+ L
Sbjct: 113 LSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDL---VKIGDFGLMRALPQND---- 165
Query: 171 GGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
DHY + HR + APE ++ + + D W
Sbjct: 166 -----DHYVMQE-HRKVPFAWCAPESLKTRTFSHASDTW 198
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 31/154 (20%)
Query: 66 HVVELLETYSSEGM----LYMVFEYMDGSDICFEIVRRATAG--FVYSEAVASHYMRQVL 119
H+++LL+ ++ +G + MVFE + G ++ I + G +Y + ++ +Q+L
Sbjct: 87 HILKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQIS----KQLL 141
Query: 120 EALRYCHEN-DIIHRDIKPHCVLLA---NKENSAPVKLGGFGVAIQLQDGQLYCSGGERL 175
L Y H IIH DIKP VL+ + EN +K+ G A C E
Sbjct: 142 LGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNA---------CWYDE-- 190
Query: 176 DHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
HYT I T Y +PEV+ +G DIW
Sbjct: 191 -HYTNS----IQTREYRSPEVLLGAPWGCGADIW 219
Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 1 MLSVDPNKRITIHEVINHKWLKMKL 25
ML +DP KR ++NH WLK L
Sbjct: 317 MLQLDPRKRADAGGLVNHPWLKDTL 341
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 31/154 (20%)
Query: 66 HVVELLETYSSEGM----LYMVFEYMDGSDICFEIVRRATAG--FVYSEAVASHYMRQVL 119
H+++LL+ ++ +G + MVFE + G ++ I + G +Y + ++ +Q+L
Sbjct: 87 HILKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQIS----KQLL 141
Query: 120 EALRYCHEN-DIIHRDIKPHCVLLA---NKENSAPVKLGGFGVAIQLQDGQLYCSGGERL 175
L Y H IIH DIKP VL+ + EN +K+ G A C E
Sbjct: 142 LGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNA---------CWYDE-- 190
Query: 176 DHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
HYT I T Y +PEV+ +G DIW
Sbjct: 191 -HYTNS----IQTREYRSPEVLLGAPWGCGADIW 219
Score = 28.5 bits (62), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 1 MLSVDPNKRITIHEVINHKWLKMKL 25
ML +DP KR ++NH WLK L
Sbjct: 317 MLQLDPRKRADAGGLVNHPWLKDTL 341
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 73/182 (40%), Gaps = 36/182 (19%)
Query: 49 EADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSE 108
+AD +REA + +P++V+LL + + ++FEYM D+ E +R + V S
Sbjct: 94 QADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDL-NEFLRSMSPHTVCSL 152
Query: 109 A---------VASH------------YMRQVLEALRYCHENDIIHRDIKPHCVLLANKEN 147
+ V+S RQV + Y E +HRD+ L+ EN
Sbjct: 153 SHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVG--EN 210
Query: 148 SAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVD 207
VK+ FG++ + D+Y I +M PE I +Y D
Sbjct: 211 MV-VKIADFGLSRNIYSA----------DYYKADGNDAIPI-RWMPPESIFYNRYTTESD 258
Query: 208 IW 209
+W
Sbjct: 259 VW 260
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 67/155 (43%), Gaps = 17/155 (10%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
EA + L+H +V L + E +Y++ E+M + + ++ G V + +
Sbjct: 57 EANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSL-LDFLKSDEGGKVLLPKLID-F 114
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGER 174
Q+ E + Y + IHRD++ VL++ S K+ FG+A ++D
Sbjct: 115 SAQIAEGMAYIERKNYIHRDLRAANVLVS---ESLMCKIADFGLARVIED---------- 161
Query: 175 LDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+ YT + G + + APE I + ++W
Sbjct: 162 -NEYTAREGAKFPI-KWTAPEAINFGCFTIKSNVW 194
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 67/162 (41%), Gaps = 18/162 (11%)
Query: 48 TEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYS 107
+E + EA + L H +V+L + + ++++ EYM + +R F
Sbjct: 46 SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM-ANGCLLNYLREMRHRFQTQ 104
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQL 167
+ + + V EA+ Y +HRD+ L+ ++ VK+ FG++ + D
Sbjct: 105 QLL--EMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQ---GVVKVSDFGLSRYVLD--- 156
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
D YT+ G + + PEV+ K+ DIW
Sbjct: 157 --------DEYTSSVGSKFPV-RWSPPEVLMYSKFSSKSDIW 189
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 64/159 (40%), Gaps = 17/159 (10%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
D RE H L H +++ L + M MV E + + +R+ F+
Sbjct: 61 DFIREVNAMHSLDHRNLIRLYGVVLTPPM-KMVTELAPLGSL-LDRLRKHQGHFLL--GT 116
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCS 170
S Y QV E + Y IHRD+ +LLA ++ VK+G FG+ L
Sbjct: 117 LSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDL---VKIGDFGLMRALPQND---- 169
Query: 171 GGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
DHY + HR + APE ++ + + D W
Sbjct: 170 -----DHYVMQE-HRKVPFAWCAPESLKTRTFSHASDTW 202
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 64/156 (41%), Gaps = 16/156 (10%)
Query: 55 EATICHMLKHPHVVELLET-YSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASH 113
E I HP+V+ LL SEG +V YM D+ +R T + +
Sbjct: 80 EGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDL-RNFIRNETHNPTVKDLIG-- 136
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
+ QV + ++Y +HRD+ +L K VK+ FG+A + D +
Sbjct: 137 FGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFT---VKVADFGLARDMYDKEXXS---- 189
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
K G ++ +MA E ++ QK+ D+W
Sbjct: 190 ----VHNKTGAKLPV-KWMALESLQTQKFTTKSDVW 220
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 67/162 (41%), Gaps = 18/162 (11%)
Query: 48 TEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYS 107
+E + EA + L H +V+L + + ++++ EYM + +R F
Sbjct: 42 SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM-ANGCLLNYLREMRHRFQTQ 100
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQL 167
+ + + V EA+ Y +HRD+ L+ ++ VK+ FG++ + D
Sbjct: 101 QLL--EMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQ---GVVKVSDFGLSRYVLD--- 152
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
D YT+ G + + PEV+ K+ DIW
Sbjct: 153 --------DEYTSSVGSKFPV-RWSPPEVLMYSKFSSKSDIW 185
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 69/149 (46%), Gaps = 18/149 (12%)
Query: 52 LKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVA 111
+ E + +H +++ L Y ++ L +V ++ +GS + + + T ++
Sbjct: 79 FRNEVAVLRKTRHVNIL-LFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQ---L 134
Query: 112 SHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSG 171
RQ + + Y H +IIHRD+K + + L VK+G FG+A + SG
Sbjct: 135 IDIARQTAQGMDYLHAKNIIHRDMKSNNIFL---HEGLTVKIGDFGLATV----KSRWSG 187
Query: 172 GERLDHYTTKAGHRIGTPHYMAPEVIEDQ 200
++++ T G+ +MAPEVI Q
Sbjct: 188 SQQVEQPT-------GSVLWMAPEVIRMQ 209
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 67/162 (41%), Gaps = 18/162 (11%)
Query: 48 TEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYS 107
+E + EA + L H +V+L + + ++++ EYM + +R F
Sbjct: 47 SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM-ANGCLLNYLREMRHRFQTQ 105
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQL 167
+ + + V EA+ Y +HRD+ L+ ++ VK+ FG++ + D
Sbjct: 106 QLL--EMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQ---GVVKVSDFGLSRYVLD--- 157
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
D YT+ G + + PEV+ K+ DIW
Sbjct: 158 --------DEYTSSVGSKFPV-RWSPPEVLMYSKFSSKSDIW 190
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 67/162 (41%), Gaps = 18/162 (11%)
Query: 48 TEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYS 107
+E + EA + L H +V+L + + ++++ EYM + +R F
Sbjct: 53 SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM-ANGCLLNYLREMRHRFQTQ 111
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQL 167
+ + + V EA+ Y +HRD+ L+ ++ VK+ FG++ + D
Sbjct: 112 QLL--EMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQ---GVVKVSDFGLSRYVLD--- 163
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
D YT+ G + + PEV+ K+ DIW
Sbjct: 164 --------DEYTSSVGSKFPV-RWSPPEVLMYSKFSSKSDIW 196
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 20/159 (12%)
Query: 53 KREATICHMLKHPHVVELLETYSSEG--MLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
K+E I L H H+++ +G L +V EY+ + + + R + G A
Sbjct: 64 KQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSL-RDYLPRHSIGL----AQ 118
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCS 170
+ +Q+ E + Y H IHR++ VLL +N VK+G FG+A + +G Y
Sbjct: 119 LLLFAQQICEGMAYLHSQHYIHRNLAARNVLL---DNDRLVKIGDFGLAKAVPEGHEYYR 175
Query: 171 GGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
E D + APE +++ K+ D+W
Sbjct: 176 VREDGD----------SPVFWYAPECLKEYKFYYASDVW 204
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 15/86 (17%)
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y + +LEA+ H++ I+H D+KP L+ + +KL FG+A Q+Q
Sbjct: 160 YWKNMLEAVHTIHQHGIVHSDLKPANFLIVD----GMLKLIDFGIANQMQP--------- 206
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIED 199
D + ++G +YM PE I+D
Sbjct: 207 --DTTSVVKDSQVGAVNYMPPEAIKD 230
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 70/156 (44%), Gaps = 16/156 (10%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
EA+I +HP+++ L ++ + ++ E+M+ + +R F + V
Sbjct: 65 EASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALD-SFLRLNDGQFTVIQLVG--M 121
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPV-KLGGFGVAIQLQDGQLYCSGGE 173
+R + +RY E +HRD+ +L+ NS V K+ FG++ L++ +
Sbjct: 122 LRGIASGMRYLAEMSYVHRDLAARNILV----NSNLVCKVSDFGLSRFLEENSSDPT--- 174
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
YT+ G +I + APE I +K+ D W
Sbjct: 175 ----YTSSLGGKIPI-RWTAPEAIAFRKFTSASDAW 205
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 70/161 (43%), Gaps = 20/161 (12%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
D EA+I HP+VV L + + +V E+M+ + +R+ F + V
Sbjct: 90 DFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALD-AFLRKHDGQFTVIQLV 148
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPV-KLGGFGVAIQLQDGQLYC 169
+R + +RY + +HRD+ +L+ NS V K+ FG++ ++D
Sbjct: 149 G--MLRGIAAGMRYLADMGYVHRDLAARNILV----NSNLVCKVSDFGLSRVIEDDPEAV 202
Query: 170 SGGERLDHYTTKAGHRIGTP-HYMAPEVIEDQKYGKPVDIW 209
YTT G P + APE I+ +K+ D+W
Sbjct: 203 --------YTTTGGK---IPVRWTAPEAIQYRKFTSASDVW 232
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 69/156 (44%), Gaps = 20/156 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYM-DGSDICFEIVRRATAGFVYSEAVASH 113
EA + L+H +V L + E +Y++ EYM +GS + F + +G +
Sbjct: 58 EANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDF---LKTPSGIKLTINKLLD 113
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Q+ E + + E + IHRD++ +L++ ++ K+ FG+A ++D
Sbjct: 114 MAAQIAEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLARLIED--------- 161
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+ T + G + + APE I + D+W
Sbjct: 162 --NEXTAREGAKFPI-KWTAPEAINYGTFTIKSDVW 194
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 69/156 (44%), Gaps = 20/156 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYM-DGSDICFEIVRRATAGFVYSEAVASH 113
EA + L+H +V L + E +Y++ EYM +GS + F + +G +
Sbjct: 59 EANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDF---LKTPSGIKLTINKLLD 114
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Q+ E + + E + IHRD++ +L++ ++ K+ FG+A ++D
Sbjct: 115 MAAQIAEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLARLIED--------- 162
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+ T + G + + APE I + D+W
Sbjct: 163 --NEXTAREGAKFPI-KWTAPEAINYGTFTIKSDVW 195
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 69/156 (44%), Gaps = 20/156 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYM-DGSDICFEIVRRATAGFVYSEAVASH 113
EA + L+H +V L + E +Y++ EYM +GS + F + +G +
Sbjct: 60 EANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDF---LKTPSGIKLTINKLLD 115
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Q+ E + + E + IHRD++ +L++ ++ K+ FG+A ++D
Sbjct: 116 MAAQIAEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLARLIED--------- 163
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+ T + G + + APE I + D+W
Sbjct: 164 --NEXTAREGAKFPI-KWTAPEAINYGTFTIKSDVW 196
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 67/162 (41%), Gaps = 18/162 (11%)
Query: 48 TEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYS 107
+E + EA + L H +V+L + + ++++ EYM + +R F
Sbjct: 47 SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM-ANGCLLNYLREMRHRFQTQ 105
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQL 167
+ + + V EA+ Y +HRD+ L+ ++ VK+ FG++ + D
Sbjct: 106 QLL--EMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQ---GVVKVSDFGLSRYVLD--- 157
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
D YT+ G + + PEV+ K+ DIW
Sbjct: 158 --------DEYTSSRGSKFPV-RWSPPEVLMYSKFSSKSDIW 190
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 69/159 (43%), Gaps = 20/159 (12%)
Query: 53 KREATICHMLKHPHVVELLETYSSEG--MLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
K+E I L H H+++ +G L +V EY+ + + + R + G A
Sbjct: 64 KQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSL-RDYLPRHSIGL----AQ 118
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCS 170
+ +Q+ E + Y H IHR++ VLL +N VK+G FG+A + +G Y
Sbjct: 119 LLLFAQQICEGMAYLHAQHYIHRNLAARNVLL---DNDRLVKIGDFGLAKAVPEGHEYYR 175
Query: 171 GGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
E D + APE +++ K+ D+W
Sbjct: 176 VREDGD----------SPVFWYAPECLKEYKFYYASDVW 204
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 58/164 (35%), Gaps = 14/164 (8%)
Query: 49 EADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDI-CFEIVRRATAGFVYS 107
E D EA I L H ++V + +++ E M G D+ F R S
Sbjct: 78 ELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 137
Query: 108 EAVAS--HYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDG 165
A+ H R + +Y EN IHRDI LL K+G FG+A +
Sbjct: 138 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 197
Query: 166 QLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
Y K G + +M PE + + D W
Sbjct: 198 SYY-----------RKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 230
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 69/156 (44%), Gaps = 20/156 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYM-DGSDICFEIVRRATAGFVYSEAVASH 113
EA + L+H +V L + E +Y++ EYM +GS + F + +G +
Sbjct: 67 EANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDF---LKTPSGIKLTINKLLD 122
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Q+ E + + E + IHRD++ +L++ ++ K+ FG+A ++D
Sbjct: 123 MAAQIAEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLARLIED--------- 170
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+ T + G + + APE I + D+W
Sbjct: 171 --NEXTAREGAKFPI-KWTAPEAINYGTFTIKSDVW 203
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 73/179 (40%), Gaps = 34/179 (18%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMD-GSDICF-EIVRRATAGFVYSE 108
DL E + + HPHV++L S +G L ++ EY GS F R+ G++ S
Sbjct: 72 DLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSG 131
Query: 109 AVAS------------------HYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAP 150
+ + Q+ + ++Y E ++HRD+ +L+A
Sbjct: 132 GSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRK--- 188
Query: 151 VKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+K+ FG++ + + D Y ++ RI +MA E + D Y D+W
Sbjct: 189 MKISDFGLSRDVYEE----------DSYVKRSQGRIPV-KWMAIESLFDHIYTTQSDVW 236
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 69/156 (44%), Gaps = 20/156 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYM-DGSDICFEIVRRATAGFVYSEAVASH 113
EA + L+H +V L + E +Y++ EYM +GS + F + +G +
Sbjct: 64 EANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDF---LKTPSGIKLTINKLLD 119
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Q+ E + + E + IHRD++ +L++ ++ K+ FG+A ++D
Sbjct: 120 MAAQIAEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLARLIED--------- 167
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+ T + G + + APE I + D+W
Sbjct: 168 --NEXTAREGAKFPI-KWTAPEAINYGTFTIKSDVW 200
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 67/156 (42%), Gaps = 20/156 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYM-DGSDICFEIVRRATAGFVYSEAVASH 113
EA + L+H +V L + E +Y++ EYM +GS + F + +G +
Sbjct: 58 EANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDF---LKTPSGIKLTINKLLD 113
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Q+ E + + E + IHRD++ +L++ ++ K+ FG+A ++D + G
Sbjct: 114 MAAQIAEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLARLIEDAEXTAREGA 170
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+ + APE I + D+W
Sbjct: 171 KFPI------------KWTAPEAINYGTFTIKSDVW 194
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 69/156 (44%), Gaps = 20/156 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYM-DGSDICFEIVRRATAGFVYSEAVASH 113
EA + L+H +V L + E +Y++ EYM +GS + F + +G +
Sbjct: 66 EANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDF---LKTPSGIKLTINKLLD 121
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Q+ E + + E + IHRD++ +L++ ++ K+ FG+A ++D
Sbjct: 122 MAAQIAEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLARLIED--------- 169
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+ T + G + + APE I + D+W
Sbjct: 170 --NEXTAREGAKFPI-KWTAPEAINYGTFTIKSDVW 202
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 71/168 (42%), Gaps = 42/168 (25%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDI-----CFEIVRRATA 102
RE + +KH +V+ LL+ ++ L Y+V M G+D+ C ++
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQ 128
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
+Y Q+L L+Y H DIIHRD+KP LA E+ +K+ G+A
Sbjct: 129 FLIY----------QILRGLKYIHSADIIHRDLKPSN--LAVNEDCE-LKILDAGLA--- 172
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIW 209
H + + T Y APE++ + Y + VDIW
Sbjct: 173 -------------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 207
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 69/156 (44%), Gaps = 20/156 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYM-DGSDICFEIVRRATAGFVYSEAVASH 113
EA + L+H +V L + E +Y++ EYM +GS + F + +G +
Sbjct: 58 EANLMKQLQHQRLVRLYAVVTQEP-IYIITEYMENGSLVDF---LKTPSGIKLTINKLLD 113
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Q+ E + + E + IHRD++ +L++ ++ K+ FG+A ++D
Sbjct: 114 MAAQIAEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLARLIED--------- 161
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+ T + G + + APE I + D+W
Sbjct: 162 --NEXTAREGAKFPI-KWTAPEAINYGTFTIKSDVW 194
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 71/168 (42%), Gaps = 42/168 (25%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDI-----CFEIVRRATA 102
RE + +KH +V+ LL+ ++ L Y+V M G+D+ C ++
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQ 128
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
+Y Q+L L+Y H DIIHRD+KP LA E+ +K+ F +A
Sbjct: 129 FLIY----------QILRGLKYIHSADIIHRDLKPSN--LAVNEDCE-LKILDFYLA--- 172
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIW 209
H + + T Y APE++ + Y + VDIW
Sbjct: 173 -------------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 207
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 58/164 (35%), Gaps = 14/164 (8%)
Query: 49 EADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDI-CFEIVRRATAGFVYS 107
E D EA I L H ++V + +++ E M G D+ F R S
Sbjct: 92 ELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 151
Query: 108 EAVAS--HYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDG 165
A+ H R + +Y EN IHRDI LL K+G FG+A +
Sbjct: 152 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 211
Query: 166 QLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
Y K G + +M PE + + D W
Sbjct: 212 SYY-----------RKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 244
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 71/168 (42%), Gaps = 42/168 (25%)
Query: 54 REATICHMLKHPHVVELLETYSSEGML------YMVFEYMDGSDI-----CFEIVRRATA 102
RE + +KH +V+ LL+ ++ L Y+V M G+D+ C ++
Sbjct: 70 RELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQ 128
Query: 103 GFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL 162
+Y Q+L L+Y H DIIHRD+KP LA E+ +K+ G+A
Sbjct: 129 FLIY----------QILRGLKYIHSADIIHRDLKPSN--LAVNEDCE-LKILDRGLA--- 172
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIED-QKYGKPVDIW 209
H + + T Y APE++ + Y + VDIW
Sbjct: 173 -------------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 207
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 62/139 (44%), Gaps = 32/139 (23%)
Query: 64 HPHVVELLETYS-----SEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQV 118
HP +V++ + + Y+V EY+ G + R +EA+A Y+ ++
Sbjct: 138 HPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLK----RSKGQKLPVAEAIA--YLLEI 191
Query: 119 LEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHY 178
L AL Y H +++ D+KP ++L ++ +KL G R++ +
Sbjct: 192 LPALSYLHSIGLVYNDLKPENIMLTEEQ----LKLIDLGAV-------------SRINSF 234
Query: 179 TTKAGHRIGTPHYMAPEVI 197
G+ GTP + APE++
Sbjct: 235 ----GYLYGTPGFQAPEIV 249
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 60/164 (36%), Gaps = 14/164 (8%)
Query: 49 EADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDI-CFEIVRRATAGFVYS 107
E D EA I H ++V + +++ E M G D+ F R S
Sbjct: 95 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 154
Query: 108 EAVAS--HYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDG 165
A+ H R + +Y EN IHRDI LL K+G FG+A
Sbjct: 155 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA-----R 209
Query: 166 QLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+Y +G Y K G + +M PE + + D W
Sbjct: 210 DIYRAG------YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 247
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 60/164 (36%), Gaps = 14/164 (8%)
Query: 49 EADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDI-CFEIVRRATAGFVYS 107
E D EA I H ++V + +++ E M G D+ F R S
Sbjct: 118 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 177
Query: 108 EAVAS--HYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDG 165
A+ H R + +Y EN IHRDI LL K+G FG+A
Sbjct: 178 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA-----R 232
Query: 166 QLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+Y +G Y K G + +M PE + + D W
Sbjct: 233 DIYRAG------YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 270
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 63/146 (43%), Gaps = 11/146 (7%)
Query: 68 VELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEALRYCHE 127
V++LE + G + +VFE + S F I F Y Q+ +++ + H
Sbjct: 80 VQMLEWFEHHGHICIVFELLGLSTYDF-IKENGFLPFRLDHIRKMAY--QICKSVNFLHS 136
Query: 128 NDIIHRDIKPHCVLLANKENSAPV--KLGGFGVAIQLQDGQLYCSGGERLD--HYTTKAG 183
N + H D+KP +L + + K+ + D ++ G D H++T
Sbjct: 137 NKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHST--- 193
Query: 184 HRIGTPHYMAPEVIEDQKYGKPVDIW 209
+ T HY APEVI + +P D+W
Sbjct: 194 -LVSTRHYRAPEVILALGWSQPCDVW 218
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 69/160 (43%), Gaps = 22/160 (13%)
Query: 53 KREATICHMLKHPHVVELLETYSSEGM--LYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
K+E I L H H+++ G L +V EY+ + + + R + G A
Sbjct: 81 KQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSL-RDYLPRHSIGL----AQ 135
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCS 170
+ +Q+ E + Y H IHRD+ VLL +N VK+G FG+A + +G
Sbjct: 136 LLLFAQQICEGMAYLHAQHYIHRDLAARNVLL---DNDRLVKIGDFGLAKAVPEG----- 187
Query: 171 GGERLDHYTTKAGHRIGTP-HYMAPEVIEDQKYGKPVDIW 209
H + +P + APE +++ K+ D+W
Sbjct: 188 ------HEXYRVREDGDSPVFWYAPECLKEYKFYYASDVW 221
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 83/205 (40%), Gaps = 42/205 (20%)
Query: 61 MLKHPHVVELLETYSSEG-------MLYMVFEYMDGS--DICFEIVRRATAGFVYSEAVA 111
+L HP++V+L + + G L +V EY+ + C RR A +
Sbjct: 75 VLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAP---PPILI 131
Query: 112 SHYMRQVLEALRYCH--ENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYC 169
++ Q++ ++ H ++ HRDIKPH VL+ E +KL FG A +L +
Sbjct: 132 KVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLV--NEADGTLKLCDFGSAKKLSPSEPNV 189
Query: 170 SGGERLDHYTTKAGHRIGTPHYMAPEVI-EDQKYGKPVDIWXXXXXXXXXXXXXXPFVGS 228
+ I + +Y APE+I +Q Y VDIW F G
Sbjct: 190 A--------------YICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGD 235
Query: 229 RDRLFQSITKGKLH----ILGCTHK 249
+ G+LH +LGC +
Sbjct: 236 N-------SAGQLHEIVRVLGCPSR 253
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 74/186 (39%), Gaps = 35/186 (18%)
Query: 41 ERLNHYTTEADLKREA----TICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEI 96
+R+ Y ++ D + A +C + HP+++ LL G LY+ EY ++ +
Sbjct: 58 KRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNL-LDF 116
Query: 97 VRRATA-----GFVYSEAVAS--------HYMRQVLEALRYCHENDIIHRDIKPHCVLLA 143
+R++ F + + AS H+ V + Y + IHRD+ +L+
Sbjct: 117 LRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVG 176
Query: 144 NKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYG 203
EN K+ FG L GQ + Y K R+ +MA E + Y
Sbjct: 177 --ENYV-AKIADFG----LSRGQ---------EVYVKKTMGRLPV-RWMAIESLNYSVYT 219
Query: 204 KPVDIW 209
D+W
Sbjct: 220 TNSDVW 225
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 57/164 (34%), Gaps = 14/164 (8%)
Query: 49 EADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDI-CFEIVRRATAGFVYS 107
E D EA I H ++V + +++ E M G D+ F R S
Sbjct: 69 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 128
Query: 108 EAVAS--HYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDG 165
A+ H R + +Y EN IHRDI LL K+G FG+A +
Sbjct: 129 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 188
Query: 166 QLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
Y K G + +M PE + + D W
Sbjct: 189 SYY-----------RKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 221
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 57/164 (34%), Gaps = 14/164 (8%)
Query: 49 EADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDI-CFEIVRRATAGFVYS 107
E D EA I H ++V + +++ E M G D+ F R S
Sbjct: 78 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 137
Query: 108 EAVAS--HYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDG 165
A+ H R + +Y EN IHRDI LL K+G FG+A +
Sbjct: 138 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 197
Query: 166 QLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
Y K G + +M PE + + D W
Sbjct: 198 SYY-----------RKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 230
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 57/164 (34%), Gaps = 14/164 (8%)
Query: 49 EADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDI-CFEIVRRATAGFVYS 107
E D EA I H ++V + +++ E M G D+ F R S
Sbjct: 78 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 137
Query: 108 EAVAS--HYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDG 165
A+ H R + +Y EN IHRDI LL K+G FG+A +
Sbjct: 138 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRA 197
Query: 166 QLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
Y K G + +M PE + + D W
Sbjct: 198 SYY-----------RKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 230
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 74/186 (39%), Gaps = 35/186 (18%)
Query: 41 ERLNHYTTEADLKREA----TICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEI 96
+R+ Y ++ D + A +C + HP+++ LL G LY+ EY ++ +
Sbjct: 48 KRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNL-LDF 106
Query: 97 VRRATA-----GFVYSEAVAS--------HYMRQVLEALRYCHENDIIHRDIKPHCVLLA 143
+R++ F + + AS H+ V + Y + IHRD+ +L+
Sbjct: 107 LRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVG 166
Query: 144 NKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYG 203
EN K+ FG L GQ + Y K R+ +MA E + Y
Sbjct: 167 --ENYV-AKIADFG----LSRGQ---------EVYVKKTMGRLPV-RWMAIESLNYSVYT 209
Query: 204 KPVDIW 209
D+W
Sbjct: 210 TNSDVW 215
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 57/164 (34%), Gaps = 14/164 (8%)
Query: 49 EADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDI-CFEIVRRATAGFVYS 107
E D EA I H ++V + +++ E M G D+ F R S
Sbjct: 84 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 143
Query: 108 EAVAS--HYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDG 165
A+ H R + +Y EN IHRDI LL K+G FG+A +
Sbjct: 144 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 203
Query: 166 QLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
Y K G + +M PE + + D W
Sbjct: 204 SYY-----------RKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 236
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 57/164 (34%), Gaps = 14/164 (8%)
Query: 49 EADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDI-CFEIVRRATAGFVYS 107
E D EA I H ++V + +++ E M G D+ F R S
Sbjct: 77 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 136
Query: 108 EAVAS--HYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDG 165
A+ H R + +Y EN IHRDI LL K+G FG+A +
Sbjct: 137 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 196
Query: 166 QLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
Y K G + +M PE + + D W
Sbjct: 197 SYY-----------RKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 229
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 57/164 (34%), Gaps = 14/164 (8%)
Query: 49 EADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDI-CFEIVRRATAGFVYS 107
E D EA I H ++V + +++ E M G D+ F R S
Sbjct: 94 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 153
Query: 108 EAVAS--HYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDG 165
A+ H R + +Y EN IHRDI LL K+G FG+A +
Sbjct: 154 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 213
Query: 166 QLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
Y K G + +M PE + + D W
Sbjct: 214 SYY-----------RKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 246
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 57/164 (34%), Gaps = 14/164 (8%)
Query: 49 EADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDI-CFEIVRRATAGFVYS 107
E D EA I H ++V + +++ E M G D+ F R S
Sbjct: 92 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 151
Query: 108 EAVAS--HYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDG 165
A+ H R + +Y EN IHRDI LL K+G FG+A +
Sbjct: 152 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 211
Query: 166 QLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
Y K G + +M PE + + D W
Sbjct: 212 SYY-----------RKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 244
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 62/159 (38%), Gaps = 17/159 (10%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
D RE H L H +++ L + M MV E + + +R+ F+
Sbjct: 57 DFIREVNAMHSLDHRNLIRLYGVVLTPPM-KMVTELAPLGSL-LDRLRKHQGHFLL--GT 112
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCS 170
S Y QV E + Y IHRD+ +LLA ++ VK+G FG+ L
Sbjct: 113 LSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDL---VKIGDFGLMRALPQN----- 164
Query: 171 GGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
D + HR + APE ++ + + D W
Sbjct: 165 -----DDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTW 198
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 57/164 (34%), Gaps = 14/164 (8%)
Query: 49 EADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDI-CFEIVRRATAGFVYS 107
E D EA I H ++V + +++ E M G D+ F R S
Sbjct: 104 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSS 163
Query: 108 EAVAS--HYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDG 165
A+ H R + +Y EN IHRDI LL K+G FG+A +
Sbjct: 164 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 223
Query: 166 QLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
Y K G + +M PE + + D W
Sbjct: 224 SYY-----------RKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 256
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 57/164 (34%), Gaps = 14/164 (8%)
Query: 49 EADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDI-CFEIVRRATAGFVYS 107
E D EA I H ++V + +++ E M G D+ F R S
Sbjct: 77 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSS 136
Query: 108 EAVAS--HYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDG 165
A+ H R + +Y EN IHRDI LL K+G FG+A +
Sbjct: 137 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 196
Query: 166 QLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
Y K G + +M PE + + D W
Sbjct: 197 SYY-----------RKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 229
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 57/164 (34%), Gaps = 14/164 (8%)
Query: 49 EADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDI-CFEIVRRATAGFVYS 107
E D EA I H ++V + +++ E M G D+ F R S
Sbjct: 92 ELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSS 151
Query: 108 EAVAS--HYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDG 165
A+ H R + +Y EN IHRDI LL K+G FG+A +
Sbjct: 152 LAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRA 211
Query: 166 QLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
Y K G + +M PE + + D W
Sbjct: 212 SYY-----------RKGGCAMLPVKWMPPEAFMEGIFTSKTDTW 244
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 62/159 (38%), Gaps = 17/159 (10%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
D RE H L H +++ L + M MV E + + +R+ F+
Sbjct: 67 DFIREVNAMHSLDHRNLIRLYGVVLTPPM-KMVTELAPLGSL-LDRLRKHQGHFLL--GT 122
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCS 170
S Y QV E + Y IHRD+ +LLA ++ VK+G FG+ L
Sbjct: 123 LSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDL---VKIGDFGLMRALPQN----- 174
Query: 171 GGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
D + HR + APE ++ + + D W
Sbjct: 175 -----DDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTW 208
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 65/157 (41%), Gaps = 16/157 (10%)
Query: 54 REATICHMLKHPHVVELLET-YSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVAS 112
RE + L HP+V+ L+ EG+ +++ YM D+ + +R + ++
Sbjct: 71 REGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDL-LQFIRSPQRNPTVKDLIS- 128
Query: 113 HYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGG 172
+ QV + Y E +HRD+ +L + S VK+ FG+A + D + Y
Sbjct: 129 -FGLQVARGMEYLAEQKFVHRDLAARNCML---DESFTVKVADFGLARDILDREYYSVQQ 184
Query: 173 ERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
R K + A E ++ ++ D+W
Sbjct: 185 HRHARLPVK---------WTALESLQTYRFTTKSDVW 212
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 62/146 (42%), Gaps = 11/146 (7%)
Query: 68 VELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEALRYCHE 127
V++LE + G + +VFE + S F I F Y Q+ +++ + H
Sbjct: 80 VQMLEWFEHHGHICIVFELLGLSTYDF-IKENGFLPFRLDHIRKMAY--QICKSVNFLHS 136
Query: 128 NDIIHRDIKPHCVLLANKENSAPV--KLGGFGVAIQLQDGQLYCSGGERLD--HYTTKAG 183
N + H D+KP +L + + K+ + D ++ G D H++T
Sbjct: 137 NKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHSTLVX 196
Query: 184 HRIGTPHYMAPEVIEDQKYGKPVDIW 209
R HY APEVI + +P D+W
Sbjct: 197 XR----HYRAPEVILALGWSQPCDVW 218
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 58/140 (41%), Gaps = 5/140 (3%)
Query: 63 KHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEAL 122
+H HVV ++ + + + EY +G + I + EA + QV L
Sbjct: 65 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 124
Query: 123 RYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKA 182
RY H ++H DIKP + ++ S P G ++ G+ L H T +
Sbjct: 125 RYIHSMSLVHMDIKPSNIFISR--TSIPNAASEEGDEDDWASNKVMFKIGD-LGHVTRIS 181
Query: 183 GHRI--GTPHYMAPEVIEDQ 200
++ G ++A EV+++
Sbjct: 182 SPQVEEGDSRFLANEVLQEN 201
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 69/156 (44%), Gaps = 20/156 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYM-DGSDICFEIVRRATAGFVYSEAVASH 113
EA + L+H +V+L + E +Y++ E+M GS + F ++ G
Sbjct: 60 EANVMKTLQHDKLVKLHAVVTKEP-IYIITEFMAKGSLLDF---LKSDEGSKQPLPKLID 115
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
+ Q+ E + + + + IHRD++ +L++ S K+ FG+A ++D
Sbjct: 116 FSAQIAEGMAFIEQRNYIHRDLRAANILVS---ASLVCKIADFGLARVIED--------- 163
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+ YT + G + + APE I + D+W
Sbjct: 164 --NEYTAREGAKFPI-KWTAPEAINFGSFTIKSDVW 196
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 67/159 (42%), Gaps = 20/159 (12%)
Query: 53 KREATICHMLKHPHVVELLETYSSEG--MLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
+RE I L H H+V+ +G + +V EY+ + + + R G A
Sbjct: 59 QREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSL-RDYLPRHCVGL----AQ 113
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCS 170
+ +Q+ E + Y H IHR + VLL +N VK+G FG+A + +G Y
Sbjct: 114 LLLFAQQICEGMAYLHAQHYIHRALAARNVLL---DNDRLVKIGDFGLAKAVPEGHEYYR 170
Query: 171 GGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
E D + APE +++ K+ D+W
Sbjct: 171 VREDGD----------SPVFWYAPECLKECKFYYASDVW 199
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 14/85 (16%)
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y+ + + L+ H+ I HRDIK VLL N + + FG+A++ + G+ S G+
Sbjct: 136 YLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTAC---IADFGLALKFEAGK---SAGD 189
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIE 198
++GT YMAPEV+E
Sbjct: 190 --------THGQVGTRRYMAPEVLE 206
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 22/146 (15%)
Query: 66 HVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEALRYC 125
++V L + L +VFE + S ++++R V S + + +Q+ AL +
Sbjct: 98 YIVHLKRHFMFRNHLCLVFEML--SYNLYDLLRNTNFRGV-SLNLTRKFAQQMCTALLFL 154
Query: 126 H--ENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAG 183
E IIH D+KP +LL N + SA +K+ FG + QL G+R+
Sbjct: 155 ATPELSIIHCDLKPENILLCNPKRSA-IKIVDFGSSCQL---------GQRI-------Y 197
Query: 184 HRIGTPHYMAPEVIEDQKYGKPVDIW 209
I + Y +PEV+ Y +D+W
Sbjct: 198 QXIQSRFYRSPEVLLGMPYDLAIDMW 223
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 58/140 (41%), Gaps = 5/140 (3%)
Query: 63 KHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEAL 122
+H HVV ++ + + + EY +G + I + EA + QV L
Sbjct: 67 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 126
Query: 123 RYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKA 182
RY H ++H DIKP + ++ S P G ++ G+ L H T +
Sbjct: 127 RYIHSMSLVHMDIKPSNIFISR--TSIPNAASEEGDEDDWASNKVMFKIGD-LGHVTRIS 183
Query: 183 GHRI--GTPHYMAPEVIEDQ 200
++ G ++A EV+++
Sbjct: 184 SPQVEEGDSRFLANEVLQEN 203
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 67/159 (42%), Gaps = 20/159 (12%)
Query: 53 KREATICHMLKHPHVVELLETYSSEG--MLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
+RE I L H H+V+ +G + +V EY+ + + + R G A
Sbjct: 58 QREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSL-RDYLPRHCVGL----AQ 112
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCS 170
+ +Q+ E + Y H IHR + VLL +N VK+G FG+A + +G Y
Sbjct: 113 LLLFAQQICEGMAYLHAQHYIHRALAARNVLL---DNDRLVKIGDFGLAKAVPEGHEYYR 169
Query: 171 GGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
E D + APE +++ K+ D+W
Sbjct: 170 VREDGD----------SPVFWYAPECLKECKFYYASDVW 198
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 58/140 (41%), Gaps = 5/140 (3%)
Query: 63 KHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEAL 122
+H HVV ++ + + + EY +G + I + EA + QV L
Sbjct: 69 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 128
Query: 123 RYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKA 182
RY H ++H DIKP + ++ S P G ++ G+ L H T +
Sbjct: 129 RYIHSMSLVHMDIKPSNIFISR--TSIPNAASEEGDEDDWASNKVMFKIGD-LGHVTRIS 185
Query: 183 GHRI--GTPHYMAPEVIEDQ 200
++ G ++A EV+++
Sbjct: 186 SPQVEEGDSRFLANEVLQEN 205
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 58/140 (41%), Gaps = 5/140 (3%)
Query: 63 KHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEAL 122
+H HVV ++ + + + EY +G + I + EA + QV L
Sbjct: 67 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 126
Query: 123 RYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKA 182
RY H ++H DIKP + ++ S P G ++ G+ L H T +
Sbjct: 127 RYIHSMSLVHMDIKPSNIFISR--TSIPNAASEEGDEDDWASNKVMFKIGD-LGHVTRIS 183
Query: 183 GHRI--GTPHYMAPEVIEDQ 200
++ G ++A EV+++
Sbjct: 184 SPQVEEGDSRFLANEVLQEN 203
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 22/146 (15%)
Query: 66 HVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEALRYC 125
++V L + L +VFE + S ++++R V S + + +Q+ AL +
Sbjct: 117 YIVHLKRHFMFRNHLCLVFEML--SYNLYDLLRNTNFRGV-SLNLTRKFAQQMCTALLFL 173
Query: 126 H--ENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAG 183
E IIH D+KP +LL N + SA +K+ FG + QL G+R+
Sbjct: 174 ATPELSIIHCDLKPENILLCNPKRSA-IKIVDFGSSCQL---------GQRI-------Y 216
Query: 184 HRIGTPHYMAPEVIEDQKYGKPVDIW 209
I + Y +PEV+ Y +D+W
Sbjct: 217 QXIQSRFYRSPEVLLGMPYDLAIDMW 242
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 69/156 (44%), Gaps = 20/156 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYM-DGSDICFEIVRRATAGFVYSEAVASH 113
EA + L+H +V+L + E +Y++ E+M GS + F ++ G
Sbjct: 233 EANVMKTLQHDKLVKLHAVVTKEP-IYIITEFMAKGSLLDF---LKSDEGSKQPLPKLID 288
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
+ Q+ E + + + + IHRD++ +L++ S K+ FG+A ++D
Sbjct: 289 FSAQIAEGMAFIEQRNYIHRDLRAANILVS---ASLVCKIADFGLARVIED--------- 336
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+ YT + G + + APE I + D+W
Sbjct: 337 --NEYTAREGAKFPI-KWTAPEAINFGSFTIKSDVW 369
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 66/162 (40%), Gaps = 18/162 (11%)
Query: 48 TEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYS 107
+E + EA + L H +V+L + + ++++ EYM + +R F
Sbjct: 62 SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM-ANGCLLNYLREMRHRFQTQ 120
Query: 108 EAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQL 167
+ + + V EA+ Y +HRD+ L+ ++ VK+ FG++ + D
Sbjct: 121 QLL--EMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQ---GVVKVSDFGLSRYVLD--- 172
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
D T+ G + + PEV+ K+ DIW
Sbjct: 173 --------DEETSSVGSKFPV-RWSPPEVLMYSKFSSKSDIW 205
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 72/179 (40%), Gaps = 34/179 (18%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMD-GSDICF-EIVRRATAGFVYSE 108
DL E + + HPHV++L S +G L ++ EY GS F R+ G++ S
Sbjct: 72 DLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSG 131
Query: 109 AVAS------------------HYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAP 150
+ + Q+ + ++Y E ++HRD+ +L+A
Sbjct: 132 GSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRK--- 188
Query: 151 VKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+K+ FG++ + + D ++ RI +MA E + D Y D+W
Sbjct: 189 MKISDFGLSRDVYEE----------DSXVKRSQGRIPV-KWMAIESLFDHIYTTQSDVW 236
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 74/186 (39%), Gaps = 35/186 (18%)
Query: 41 ERLNHYTTEADLKREA----TICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEI 96
+R+ Y ++ D + A +C + HP+++ LL G LY+ EY ++ +
Sbjct: 55 KRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNL-LDF 113
Query: 97 VRRATA-----GFVYSEAVAS--------HYMRQVLEALRYCHENDIIHRDIKPHCVLLA 143
+R++ F + + AS H+ V + Y + IHR++ +L+
Sbjct: 114 LRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVG 173
Query: 144 NKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYG 203
EN K+ FG L GQ + Y K R+ +MA E + Y
Sbjct: 174 --ENYV-AKIADFG----LSRGQ---------EVYVKKTMGRLPV-RWMAIESLNYSVYT 216
Query: 204 KPVDIW 209
D+W
Sbjct: 217 TNSDVW 222
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 69/156 (44%), Gaps = 16/156 (10%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHY 114
EA+I +HP+++ L ++ + ++ E+M+ + +R F + V
Sbjct: 67 EASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALD-SFLRLNDGQFTVIQLVG--M 123
Query: 115 MRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPV-KLGGFGVAIQLQDGQLYCSGGE 173
+R + +RY E +HRD+ +L+ NS V K+ FG++ L++ +
Sbjct: 124 LRGIASGMRYLAEMSYVHRDLAARNILV----NSNLVCKVSDFGLSRFLEENSSDPT--- 176
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
T+ G +I + APE I +K+ D W
Sbjct: 177 ----ETSSLGGKIPI-RWTAPEAIAFRKFTSASDAW 207
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 72/179 (40%), Gaps = 34/179 (18%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMD-GSDICF-EIVRRATAGFVYSE 108
DL E + + HPHV++L S +G L ++ EY GS F R+ G++ S
Sbjct: 72 DLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSG 131
Query: 109 AVAS------------------HYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAP 150
+ + Q+ + ++Y E ++HRD+ +L+A
Sbjct: 132 GSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRK--- 188
Query: 151 VKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+K+ FG++ + + D ++ RI +MA E + D Y D+W
Sbjct: 189 MKISDFGLSRDVYEE----------DSXVKRSQGRIPV-KWMAIESLFDHIYTTQSDVW 236
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 68/161 (42%), Gaps = 20/161 (12%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAV 110
D EA I H +++ L S + ++ EYM+ + + +R F + V
Sbjct: 92 DFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALD-KFLREKDGEFSVLQLV 150
Query: 111 ASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPV-KLGGFGVAIQLQDGQLYC 169
+R + ++Y + +HRD+ +L+ NS V K+ FG++ L+D
Sbjct: 151 G--MLRGIAAGMKYLANMNYVHRDLAARNILV----NSNLVCKVSDFGLSRVLED----- 199
Query: 170 SGGERLDHYTTKAGHRIGTP-HYMAPEVIEDQKYGKPVDIW 209
+ YTT G P + APE I +K+ D+W
Sbjct: 200 ---DPEATYTTSGGK---IPIRWTAPEAISYRKFTSASDVW 234
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 60/139 (43%), Gaps = 3/139 (2%)
Query: 64 HPHVVELLETYSSEGMLYMVFEY--MDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEA 121
HP+V+ + +++ LY+ E ++ D+ + E +RQ+
Sbjct: 68 HPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASG 127
Query: 122 LRYCHENDIIHRDIKPHCVLLANKEN-SAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTT 180
+ + H IIHRD+KP +L++ +A + G + I + D L + T
Sbjct: 128 VAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRT 187
Query: 181 KAGHRIGTPHYMAPEVIED 199
+ GT + APE++E+
Sbjct: 188 NLNNPSGTSGWRAPELLEE 206
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 74/184 (40%), Gaps = 31/184 (16%)
Query: 31 IEPASFGLPDERLNHYTTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGS 90
I P F D E L RE+ +HP+V+ T Y+ E +
Sbjct: 56 ILPECFSFADR-------EVQLLRESD-----EHPNVIRYFCTEKDRQFQYIAIELCAAT 103
Query: 91 DICFEIVRRATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAP 150
E V + + E + ++Q L + H +I+HRD+KPH +L++
Sbjct: 104 --LQEYVEQKDFAHLGLEPIT--LLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGK 159
Query: 151 VK--LGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKP--- 205
+K + FG+ +L G+ H ++ GT ++APE++ + P
Sbjct: 160 IKAMISDFGLCKKLAVGR----------HSFSRRSGVPGTEGWIAPEMLSEDCKENPTYT 209
Query: 206 VDIW 209
VDI+
Sbjct: 210 VDIF 213
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 17/101 (16%)
Query: 110 VASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYC 169
+ S Y+ Q+ A+ + H I HRDIKP +L+ +K+N+ +KL FG A +L +
Sbjct: 142 LISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNT--LKLCDFGSAKKLIPSEPSV 199
Query: 170 SGGERLDHYTTKAGHRIGTPHYMAPEV-IEDQKYGKPVDIW 209
+ I + Y APE+ + +Y +D+W
Sbjct: 200 A--------------XICSRFYRAPELMLGATEYTPSIDLW 226
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 64/152 (42%), Gaps = 27/152 (17%)
Query: 65 PHVVELLETYSSEGMLYMVFEYMDGSDICF--EIVRRATAGFVYSEAVASHYMRQVLEAL 122
P V EG +++ E MD S F +++ + G E + +++AL
Sbjct: 110 PFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDK---GQTIPEDILGKIAVSIVKAL 166
Query: 123 RYCHEN-DIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTK 181
+ H +IHRD+KP VL+ VK+ FG++ G L S + +D
Sbjct: 167 EHLHSKLSVIHRDVKPSNVLI---NALGQVKMCDFGIS-----GYLVDSVAKTIDA---- 214
Query: 182 AGHRIGTPHYMAPEVIE---DQK-YGKPVDIW 209
G YMAPE I +QK Y DIW
Sbjct: 215 -----GCKPYMAPERINPELNQKGYSVKSDIW 241
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 64/156 (41%), Gaps = 20/156 (12%)
Query: 55 EATICHMLKHPHVVELLETYSSEGMLYMVFEYMD-GSDICFEIVRRATAGFVYSEAVASH 113
EA I LKH +V+L S E +Y+V EYM+ GS + F + G
Sbjct: 54 EAQIMKKLKHDKLVQLYAVVSEEP-IYIVTEYMNKGSLLDF---LKDGEGRALKLPNLVD 109
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
QV + Y + IHRD++ +L+ N K+ FG+A ++D
Sbjct: 110 MAAQVAAGMAYIERMNYIHRDLRSANILVG---NGLICKIADFGLARLIED--------- 157
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+ T + G + + APE ++ D+W
Sbjct: 158 --NEXTARQGAKFPI-KWTAPEAALYGRFTIKSDVW 190
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 52/136 (38%), Gaps = 18/136 (13%)
Query: 113 HYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVA------------- 159
YM + +AL+ H+ I+HRD+KP L + L FG+A
Sbjct: 121 EYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKK--YALVDFGLAQGTHDTKIELLKF 178
Query: 160 IQLQDGQLYCSGGERLDHYTTK--AGHRIGTPHYMAPEVIED-QKYGKPVDIWXXXXXXX 216
+Q + Q CS + + + R GTP + APEV+ +D+W
Sbjct: 179 VQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFL 238
Query: 217 XXXXXXXPFVGSRDRL 232
PF + D L
Sbjct: 239 SLLSGRYPFYKASDDL 254
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 76/175 (43%), Gaps = 24/175 (13%)
Query: 41 ERLNHYTTE--ADLKREATICHMLKHPHVVELLETYSSEGM--LYMVFEYMDGSDICFEI 96
++L H T E D +RE I L+H ++V+ S G L ++ EY+ + +
Sbjct: 45 KKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR-DY 103
Query: 97 VRRATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGF 156
+++ + + + Y Q+ + + Y IHRD+ +L+ EN VK+G F
Sbjct: 104 LQKHKERIDHIKLL--QYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDF 158
Query: 157 GVAIQL-QDGQLYCSGGERLDHYTTKAGHRIGTP-HYMAPEVIEDQKYGKPVDIW 209
G+ L QD + + K +P + APE + + K+ D+W
Sbjct: 159 GLTKVLPQDKEFF------------KVKEPGESPIFWYAPESLTESKFSVASDVW 201
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 66/146 (45%), Gaps = 22/146 (15%)
Query: 66 HVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEALRYC 125
++V L + L +VFE + S ++++R V S + + +Q+ AL +
Sbjct: 117 YIVHLKRHFMFRNHLCLVFEML--SYNLYDLLRNTNFRGV-SLNLTRKFAQQMCTALLFL 173
Query: 126 H--ENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAG 183
E IIH D+KP +LL N + A +K+ FG + QL G+R+
Sbjct: 174 ATPELSIIHCDLKPENILLCNPKRXA-IKIVDFGSSCQL---------GQRI-------Y 216
Query: 184 HRIGTPHYMAPEVIEDQKYGKPVDIW 209
I + Y +PEV+ Y +D+W
Sbjct: 217 QXIQSRFYRSPEVLLGMPYDLAIDMW 242
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 63/164 (38%), Gaps = 14/164 (8%)
Query: 53 KREATICHMLKHPHVVEL----LETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSE 108
+REA + + HP+++ L L ++ +++ + + EI R G +E
Sbjct: 74 QREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTE 133
Query: 109 AVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLY 168
+ + L H HRD+KP +LL ++ + LG A ++
Sbjct: 134 DQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQAC------IH 187
Query: 169 CSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKY---GKPVDIW 209
G + A R T Y APE+ Q + + D+W
Sbjct: 188 VEGSRQALTLQDWAAQRC-TISYRAPELFSVQSHCVIDERTDVW 230
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 70/161 (43%), Gaps = 24/161 (14%)
Query: 64 HPHVVELLETYSSEGMLYMVFEY--MDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEA 121
HP+V+ + +++ LY+ E ++ D+ + E +RQ+
Sbjct: 86 HPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASG 145
Query: 122 LRYCHENDIIHRDIKPHCVLL-------ANKENSAP---VKLGGFGVAIQLQDGQLYCSG 171
+ + H IIHRD+KP +L+ A+++ A + + FG+ +L GQ
Sbjct: 146 VAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQX---- 201
Query: 172 GERLDHYTTKAGHRIGTPHYMAPEVIED---QKYGKPVDIW 209
+ + GT + APE++E+ ++ + +DI+
Sbjct: 202 -----XFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIF 237
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 70/161 (43%), Gaps = 24/161 (14%)
Query: 64 HPHVVELLETYSSEGMLYMVFEY--MDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEA 121
HP+V+ + +++ LY+ E ++ D+ + E +RQ+
Sbjct: 86 HPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASG 145
Query: 122 LRYCHENDIIHRDIKPHCVLL-------ANKENSAP---VKLGGFGVAIQLQDGQLYCSG 171
+ + H IIHRD+KP +L+ A+++ A + + FG+ +L GQ
Sbjct: 146 VAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQX---- 201
Query: 172 GERLDHYTTKAGHRIGTPHYMAPEVIED---QKYGKPVDIW 209
+ + GT + APE++E+ ++ + +DI+
Sbjct: 202 -----XFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIF 237
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 92/238 (38%), Gaps = 43/238 (18%)
Query: 1 MLSVDPNKRITIHEVINHKW--LKMKLHTSAEIEPASFGL-------------PDERLNH 45
M SV+P + +W + K+ S E+ SFG+ P+ R+
Sbjct: 1 MASVNPEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAI 60
Query: 46 YT-TEADLKRE-------ATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDI--CFE 95
T EA RE A++ HVV LL S ++ E M D+
Sbjct: 61 KTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLR 120
Query: 96 IVRRATAGF-VYSEAVASHYMR---QVLEALRYCHENDIIHRDIKPHCVLLANKENSAPV 151
+R A A V + S ++ ++ + + Y + N +HRD+ ++A V
Sbjct: 121 SLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE---DFTV 177
Query: 152 KLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
K+G FG+ + + Y GG+ L +M+PE ++D + D+W
Sbjct: 178 KIGDFGMTRDIYETDYYRKGGKGLLPV-----------RWMSPESLKDGVFTTYSDVW 224
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 69/162 (42%), Gaps = 27/162 (16%)
Query: 54 REATICHMLKHPHVVELLETY-----SSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSE 108
RE + + HP+++ L + + + LY+V E M +D+ I V S
Sbjct: 78 REIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVI---HDQRIVISP 133
Query: 109 AVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLY 168
++M +L L HE ++HRD+ P +LLA+ + + + F +A
Sbjct: 134 QHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNND---ITICDFNLA--------- 181
Query: 169 CSGGERLDHYTTKAGHRIGTPHYMAPE-VIEDQKYGKPVDIW 209
R D H + Y APE V++ + + K VD+W
Sbjct: 182 -----REDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMW 218
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 75/169 (44%), Gaps = 35/169 (20%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLY----MVFEYMDGSDICFEIVRRATAGFVY 106
+ +RE I L HP++V+L G+++ MV E++ D+ ++ +A
Sbjct: 69 EFQREVFIMSNLNHPNIVKLY------GLMHNPPRMVMEFVPCGDLYHRLLDKAHP---I 119
Query: 107 SEAVASHYMRQVLEALRYCHEND--IIHRDIKPHCVLLANKENSAPV--KLGGFGVAIQL 162
+V M + + Y + I+HRD++ + L + + +APV K+ FG++ Q
Sbjct: 120 KWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQ- 178
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVI--EDQKYGKPVDIW 209
++ G +G +MAPE I E++ Y + D +
Sbjct: 179 ---SVHSVSG------------LLGNFQWMAPETIGAEEESYTEKADTY 212
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 69/162 (42%), Gaps = 27/162 (16%)
Query: 54 REATICHMLKHPHVVELLETY-----SSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSE 108
RE + + HP+++ L + + + LY+V E M +D+ I V S
Sbjct: 78 REIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVI---HDQRIVISP 133
Query: 109 AVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLY 168
++M +L L HE ++HRD+ P +LLA+ + + + F +A
Sbjct: 134 QHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNND---ITICDFNLA--------- 181
Query: 169 CSGGERLDHYTTKAGHRIGTPHYMAPE-VIEDQKYGKPVDIW 209
R D H + Y APE V++ + + K VD+W
Sbjct: 182 -----REDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMW 218
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 73/174 (41%), Gaps = 22/174 (12%)
Query: 41 ERLNHYTTE--ADLKREATICHMLKHPHVVELLETYSSEGM--LYMVFEYMDGSDICFEI 96
++L H T E D +RE I L+H ++V+ S G L ++ EY+ + +
Sbjct: 63 KKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR-DY 121
Query: 97 VRRATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGF 156
+++ + + + Y Q+ + + Y IHRD+ +L+ EN VK+G F
Sbjct: 122 LQKHKERIDHIKLL--QYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDF 176
Query: 157 GVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTP-HYMAPEVIEDQKYGKPVDIW 209
G+ L D K +P + APE + + K+ D+W
Sbjct: 177 GLTKVLPQ-----------DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVW 219
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 73/174 (41%), Gaps = 22/174 (12%)
Query: 41 ERLNHYTTE--ADLKREATICHMLKHPHVVELLETYSSEGM--LYMVFEYMDGSDICFEI 96
++L H T E D +RE I L+H ++V+ S G L ++ EY+ + +
Sbjct: 63 KKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR-DY 121
Query: 97 VRRATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGF 156
+++ + + + Y Q+ + + Y IHRD+ +L+ EN VK+G F
Sbjct: 122 LQKHKERIDHIKLL--QYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDF 176
Query: 157 GVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTP-HYMAPEVIEDQKYGKPVDIW 209
G+ L D K +P + APE + + K+ D+W
Sbjct: 177 GLTKVLPQ-----------DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVW 219
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 73/174 (41%), Gaps = 22/174 (12%)
Query: 41 ERLNHYTTE--ADLKREATICHMLKHPHVVELLETYSSEGM--LYMVFEYMDGSDICFEI 96
++L H T E D +RE I L+H ++V+ S G L ++ EY+ + +
Sbjct: 43 KKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR-DY 101
Query: 97 VRRATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGF 156
+++ + + + Y Q+ + + Y IHRD+ +L+ EN VK+G F
Sbjct: 102 LQKHKERIDHIKLL--QYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDF 156
Query: 157 GVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTP-HYMAPEVIEDQKYGKPVDIW 209
G+ L D K +P + APE + + K+ D+W
Sbjct: 157 GLTKVLPQ-----------DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVW 199
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 73/174 (41%), Gaps = 22/174 (12%)
Query: 41 ERLNHYTTE--ADLKREATICHMLKHPHVVELLETYSSEGM--LYMVFEYMDGSDICFEI 96
++L H T E D +RE I L+H ++V+ S G L ++ EY+ + +
Sbjct: 50 KKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR-DY 108
Query: 97 VRRATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGF 156
+++ + + + Y Q+ + + Y IHRD+ +L+ EN VK+G F
Sbjct: 109 LQKHKERIDHIKLL--QYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDF 163
Query: 157 GVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTP-HYMAPEVIEDQKYGKPVDIW 209
G+ L D K +P + APE + + K+ D+W
Sbjct: 164 GLTKVLPQ-----------DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVW 206
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 73/174 (41%), Gaps = 22/174 (12%)
Query: 41 ERLNHYTTE--ADLKREATICHMLKHPHVVELLETYSSEGM--LYMVFEYMDGSDICFEI 96
++L H T E D +RE I L+H ++V+ S G L ++ E++ + E
Sbjct: 48 KKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLR-EY 106
Query: 97 VRRATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGF 156
+++ + + + Y Q+ + + Y IHRD+ +L+ EN VK+G F
Sbjct: 107 LQKHKERIDHIKLL--QYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDF 161
Query: 157 GVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTP-HYMAPEVIEDQKYGKPVDIW 209
G+ L D K +P + APE + + K+ D+W
Sbjct: 162 GLTKVLPQ-----------DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVW 204
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 65/137 (47%), Gaps = 15/137 (10%)
Query: 82 MVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVL 141
++FE + S +EI+ R + E + Y ++L+AL Y + + H D+KP +L
Sbjct: 113 LIFEPLGPS--LYEIITRNNYNGFHIEDIKL-YCIEILKALNYLRKMSLTHTDLKPENIL 169
Query: 142 LAN---KENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHY---TTKA---GHRIGTPHYM 192
L + +++ V+ G IQ+ + S G +L + T K+ G I T Y
Sbjct: 170 LDDPYFEKSLITVRRVTDGKKIQIYRTK---STGIKLIDFGCATFKSDYHGSIINTRQYR 226
Query: 193 APEVIEDQKYGKPVDIW 209
APEVI + + D+W
Sbjct: 227 APEVILNLGWDVSSDMW 243
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 74/169 (43%), Gaps = 35/169 (20%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLY----MVFEYMDGSDICFEIVRRATAGFVY 106
+ +RE I L HP++V+L G+++ MV E++ D+ ++ +A
Sbjct: 69 EFQREVFIMSNLNHPNIVKLY------GLMHNPPRMVMEFVPCGDLYHRLLDKAHP---I 119
Query: 107 SEAVASHYMRQVLEALRYCHEND--IIHRDIKPHCVLLANKENSAPV--KLGGFGVAIQL 162
+V M + + Y + I+HRD++ + L + + +APV K+ FG + Q
Sbjct: 120 KWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQ- 178
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVI--EDQKYGKPVDIW 209
++ G +G +MAPE I E++ Y + D +
Sbjct: 179 ---SVHSVSG------------LLGNFQWMAPETIGAEEESYTEKADTY 212
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 73/174 (41%), Gaps = 22/174 (12%)
Query: 41 ERLNHYTTE--ADLKREATICHMLKHPHVVELLETYSSEGM--LYMVFEYMDGSDICFEI 96
++L H T E D +RE I L+H ++V+ S G L ++ EY+ + +
Sbjct: 52 KKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR-DY 110
Query: 97 VRRATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGF 156
+++ + + + Y Q+ + + Y IHRD+ +L+ EN VK+G F
Sbjct: 111 LQKHKERIDHIKLL--QYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDF 165
Query: 157 GVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTP-HYMAPEVIEDQKYGKPVDIW 209
G+ L D K +P + APE + + K+ D+W
Sbjct: 166 GLTKVLPQ-----------DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVW 208
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 73/174 (41%), Gaps = 22/174 (12%)
Query: 41 ERLNHYTTE--ADLKREATICHMLKHPHVVELLETYSSEGM--LYMVFEYMDGSDICFEI 96
++L H T E D +RE I L+H ++V+ S G L ++ EY+ + +
Sbjct: 45 KKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR-DY 103
Query: 97 VRRATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGF 156
+++ + + + Y Q+ + + Y IHRD+ +L+ EN VK+G F
Sbjct: 104 LQKHKERIDHIKLL--QYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDF 158
Query: 157 GVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTP-HYMAPEVIEDQKYGKPVDIW 209
G+ L D K +P + APE + + K+ D+W
Sbjct: 159 GLTKVLPQ-----------DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVW 201
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 73/174 (41%), Gaps = 22/174 (12%)
Query: 41 ERLNHYTTE--ADLKREATICHMLKHPHVVELLETYSSEGM--LYMVFEYMDGSDICFEI 96
++L H T E D +RE I L+H ++V+ S G L ++ EY+ + +
Sbjct: 51 KKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR-DY 109
Query: 97 VRRATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGF 156
+++ + + + Y Q+ + + Y IHRD+ +L+ EN VK+G F
Sbjct: 110 LQKHKERIDHIKLL--QYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDF 164
Query: 157 GVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTP-HYMAPEVIEDQKYGKPVDIW 209
G+ L D K +P + APE + + K+ D+W
Sbjct: 165 GLTKVLPQ-----------DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVW 207
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 73/174 (41%), Gaps = 22/174 (12%)
Query: 41 ERLNHYTTE--ADLKREATICHMLKHPHVVELLETYSSEGM--LYMVFEYMDGSDICFEI 96
++L H T E D +RE I L+H ++V+ S G L ++ EY+ + +
Sbjct: 48 KKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR-DY 106
Query: 97 VRRATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGF 156
+++ + + + Y Q+ + + Y IHRD+ +L+ EN VK+G F
Sbjct: 107 LQKHKERIDHIKLL--QYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDF 161
Query: 157 GVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTP-HYMAPEVIEDQKYGKPVDIW 209
G+ L D K +P + APE + + K+ D+W
Sbjct: 162 GLTKVLPQ-----------DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVW 204
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 73/174 (41%), Gaps = 22/174 (12%)
Query: 41 ERLNHYTTE--ADLKREATICHMLKHPHVVELLETYSSEGM--LYMVFEYMDGSDICFEI 96
++L H T E D +RE I L+H ++V+ S G L ++ EY+ + +
Sbjct: 44 KKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR-DY 102
Query: 97 VRRATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGF 156
+++ + + + Y Q+ + + Y IHRD+ +L+ EN VK+G F
Sbjct: 103 LQKHKERIDHIKLL--QYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDF 157
Query: 157 GVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTP-HYMAPEVIEDQKYGKPVDIW 209
G+ L D K +P + APE + + K+ D+W
Sbjct: 158 GLTKVLPQ-----------DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVW 200
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 73/174 (41%), Gaps = 22/174 (12%)
Query: 41 ERLNHYTTE--ADLKREATICHMLKHPHVVELLETYSSEGM--LYMVFEYMDGSDICFEI 96
++L H T E D +RE I L+H ++V+ S G L ++ EY+ + +
Sbjct: 76 KKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR-DY 134
Query: 97 VRRATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGF 156
+++ + + + Y Q+ + + Y IHRD+ +L+ EN VK+G F
Sbjct: 135 LQKHKERIDHIKLL--QYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDF 189
Query: 157 GVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTP-HYMAPEVIEDQKYGKPVDIW 209
G+ L D K +P + APE + + K+ D+W
Sbjct: 190 GLTKVLPQ-----------DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVW 232
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 73/174 (41%), Gaps = 22/174 (12%)
Query: 41 ERLNHYTTE--ADLKREATICHMLKHPHVVELLETYSSEGM--LYMVFEYMDGSDICFEI 96
++L H T E D +RE I L+H ++V+ S G L ++ EY+ + +
Sbjct: 45 KKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR-DY 103
Query: 97 VRRATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGF 156
+++ + + + Y Q+ + + Y IHRD+ +L+ EN VK+G F
Sbjct: 104 LQKHKERIDHIKLL--QYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDF 158
Query: 157 GVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTP-HYMAPEVIEDQKYGKPVDIW 209
G+ L D K +P + APE + + K+ D+W
Sbjct: 159 GLTKVLPQ-----------DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVW 201
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 73/175 (41%), Gaps = 27/175 (15%)
Query: 41 ERLNHYTTEADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDI--CFEIVR 98
ER+ + EA + +E CH HVV LL S ++ E M D+ +R
Sbjct: 61 ERI-EFLNEASVMKEFN-CH-----HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLR 113
Query: 99 RATAGF-VYSEAVASHYMR---QVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLG 154
A A V + S ++ ++ + + Y + N +HRD+ ++A VK+G
Sbjct: 114 PAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE---DFTVKIG 170
Query: 155 GFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
FG+ + + Y GG+ L +M+PE ++D + D+W
Sbjct: 171 DFGMTRDIYETDYYRKGGKGLLPV-----------RWMSPESLKDGVFTTYSDVW 214
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 68/174 (39%), Gaps = 22/174 (12%)
Query: 41 ERLNHYTTE--ADLKREATICHMLKHPHVVELLETYSSEGM--LYMVFEYMDGSDICFEI 96
++L H T E D +RE I L+H ++V+ S G L ++ EY+ + +
Sbjct: 48 KKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL 107
Query: 97 VRRATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGF 156
A Y Q+ + + Y IHRD+ +L+ EN VK+G F
Sbjct: 108 QAHAER---IDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDF 161
Query: 157 GVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTP-HYMAPEVIEDQKYGKPVDIW 209
G+ L D K +P + APE + + K+ D+W
Sbjct: 162 GLTKVLPQ-----------DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVW 204
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 73/174 (41%), Gaps = 22/174 (12%)
Query: 41 ERLNHYTTE--ADLKREATICHMLKHPHVVELLETYSSEGM--LYMVFEYMDGSDICFEI 96
++L H T E D +RE I L+H ++V+ S G L ++ EY+ + +
Sbjct: 49 KKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR-DY 107
Query: 97 VRRATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGF 156
+++ + + + Y Q+ + + Y IHRD+ +L+ EN VK+G F
Sbjct: 108 LQKHKERIDHIKLL--QYTSQICKGMEYLGTKRYIHRDLATRNILV---ENENRVKIGDF 162
Query: 157 GVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTP-HYMAPEVIEDQKYGKPVDIW 209
G+ L D K +P + APE + + K+ D+W
Sbjct: 163 GLTKVLPQ-----------DKEXXKVKEPGESPIFWYAPESLTESKFSVASDVW 205
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 73/168 (43%), Gaps = 22/168 (13%)
Query: 58 ICHMLK---HPHVVELL--------ETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVY 106
+C M K HP++V+ E+ + + ++ E G + F + + + G +
Sbjct: 76 VCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEF-LKKMESRGPLS 134
Query: 107 SEAVASHYMRQVLEALRYCHEND--IIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQD 164
+ V + Q A+++ H IIHRD+K +LL+N+ +KL FG A +
Sbjct: 135 CDTVLKIFY-QTCRAVQHMHRQKPPIIHRDLKVENLLLSNQ---GTIKLCDFGSATTISH 190
Query: 165 GQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIE---DQKYGKPVDIW 209
Y +R + R TP Y PE+I+ + G+ DIW
Sbjct: 191 YPDYSWSAQR-RALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIW 237
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 76/175 (43%), Gaps = 24/175 (13%)
Query: 41 ERLNHYTTE--ADLKREATICHMLKHPHVVELLETYSSEGM--LYMVFEYMDGSDICFEI 96
++L H T E D +RE I L+H ++V+ S G L ++ EY+ + +
Sbjct: 46 KKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR-DY 104
Query: 97 VRRATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGF 156
+++ + + + Y Q+ + + Y IHR++ +L+ EN VK+G F
Sbjct: 105 LQKHKERIDHIKLL--QYTSQICKGMEYLGTKRYIHRNLATRNILV---ENENRVKIGDF 159
Query: 157 GVAIQL-QDGQLYCSGGERLDHYTTKAGHRIGTP-HYMAPEVIEDQKYGKPVDIW 209
G+ L QD + Y K +P + APE + + K+ D+W
Sbjct: 160 GLTKVLPQDKEYY------------KVKEPGESPIFWYAPESLTESKFSVASDVW 202
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 70/176 (39%), Gaps = 30/176 (17%)
Query: 49 EADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSE 108
EA + + ++ H ++V LL + G ++ EY D+ +RR F+ S+
Sbjct: 71 EALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDL-LNFLRRKRDSFICSK 129
Query: 109 AVAS---------------HYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKL 153
+ + QV + + + + IHRD+ +LL + + K+
Sbjct: 130 TSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRIT---KI 186
Query: 154 GGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
FG+A +++ +Y K R+ +MAPE I + Y D+W
Sbjct: 187 CDFGLARDIKNDS----------NYVVKGNARLPV-KWMAPESIFNCVYTFESDVW 231
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 70/176 (39%), Gaps = 30/176 (17%)
Query: 49 EADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSE 108
EA + + ++ H ++V LL + G ++ EY D+ +RR F+ S+
Sbjct: 87 EALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDL-LNFLRRKRDSFICSK 145
Query: 109 AVAS---------------HYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKL 153
+ + QV + + + + IHRD+ +LL + + K+
Sbjct: 146 TSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRIT---KI 202
Query: 154 GGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
FG+A +++ +Y K R+ +MAPE I + Y D+W
Sbjct: 203 CDFGLARDIKNDS----------NYVVKGNARLPV-KWMAPESIFNCVYTFESDVW 247
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 70/176 (39%), Gaps = 30/176 (17%)
Query: 49 EADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSE 108
EA + + ++ H ++V LL + G ++ EY D+ +RR F+ S+
Sbjct: 89 EALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDL-LNFLRRKRDSFICSK 147
Query: 109 AVAS---------------HYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKL 153
+ + QV + + + + IHRD+ +LL + + K+
Sbjct: 148 TSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRIT---KI 204
Query: 154 GGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
FG+A +++ +Y K R+ +MAPE I + Y D+W
Sbjct: 205 CDFGLARDIKNDS----------NYVVKGNARLPV-KWMAPESIFNCVYTFESDVW 249
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 70/176 (39%), Gaps = 30/176 (17%)
Query: 49 EADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSE 108
EA + + ++ H ++V LL + G ++ EY D+ +RR F+ S+
Sbjct: 94 EALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDL-LNFLRRKRDSFICSK 152
Query: 109 AVAS---------------HYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKL 153
+ + QV + + + + IHRD+ +LL + + K+
Sbjct: 153 TSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRIT---KI 209
Query: 154 GGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
FG+A +++ +Y K R+ +MAPE I + Y D+W
Sbjct: 210 CDFGLARDIKNDS----------NYVVKGNARLPV-KWMAPESIFNCVYTFESDVW 254
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 67/184 (36%), Gaps = 50/184 (27%)
Query: 67 VVELLETYSSEGM----LYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEAL 122
VV+LL+ + G+ + MVFE + G + I++ G ++QVL+ L
Sbjct: 103 VVQLLDDFKISGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPL--PCVKKIIQQVLQGL 159
Query: 123 RYCHEN-DIIHRDIKPHCVLLANKE--------------------------NSAPVKLGG 155
Y H IIH DIKP +LL+ E ++AP G
Sbjct: 160 DYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGN 219
Query: 156 FGVAIQLQDGQLYCSGGERLDHYTTKAGHR----------IGTPHYMAPEVIEDQKYGKP 205
F V L E+L G+ I T Y + EV+ Y P
Sbjct: 220 FLV------NPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTP 273
Query: 206 VDIW 209
DIW
Sbjct: 274 ADIW 277
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 67/184 (36%), Gaps = 50/184 (27%)
Query: 67 VVELLETYSSEGM----LYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEAL 122
VV+LL+ + G+ + MVFE + G + I++ G ++QVL+ L
Sbjct: 87 VVQLLDDFKISGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLP--CVKKIIQQVLQGL 143
Query: 123 RYCHEN-DIIHRDIKPHCVLLANKE--------------------------NSAPVKLGG 155
Y H IIH DIKP +LL+ E ++AP G
Sbjct: 144 DYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGN 203
Query: 156 FGVAIQLQDGQLYCSGGERLDHYTTKAGHR----------IGTPHYMAPEVIEDQKYGKP 205
F V L E+L G+ I T Y + EV+ Y P
Sbjct: 204 FLV------NPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTP 257
Query: 206 VDIW 209
DIW
Sbjct: 258 ADIW 261
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 63/152 (41%), Gaps = 27/152 (17%)
Query: 65 PHVVELLETYSSEGMLYMVFEYMDGSDICF--EIVRRATAGFVYSEAVASHYMRQVLEAL 122
P V EG +++ E MD S F +++ + G E + +++AL
Sbjct: 66 PFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDK---GQTIPEDILGKIAVSIVKAL 122
Query: 123 RYCHEN-DIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTK 181
+ H +IHRD+KP VL+ VK+ FG++ G L + +D
Sbjct: 123 EHLHSKLSVIHRDVKPSNVLI---NALGQVKMCDFGIS-----GYLVDDVAKDIDA---- 170
Query: 182 AGHRIGTPHYMAPEVIE---DQK-YGKPVDIW 209
G YMAPE I +QK Y DIW
Sbjct: 171 -----GCKPYMAPERINPELNQKGYSVKSDIW 197
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 70/176 (39%), Gaps = 30/176 (17%)
Query: 49 EADLKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSE 108
EA + + ++ H ++V LL + G ++ EY D+ +RR F+ S+
Sbjct: 94 EALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDL-LNFLRRKRDSFICSK 152
Query: 109 AVAS---------------HYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKL 153
+ + QV + + + + IHRD+ +LL + + K+
Sbjct: 153 TSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRIT---KI 209
Query: 154 GGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
FG+A +++ +Y K R+ +MAPE I + Y D+W
Sbjct: 210 CDFGLARHIKNDS----------NYVVKGNARLPV-KWMAPESIFNCVYTFESDVW 254
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 63/148 (42%), Gaps = 21/148 (14%)
Query: 64 HPHVVELLETYSSEGMLYMVFEY--MDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEA 121
HP+V+ + +++ LY+ E ++ D+ + E +RQ+
Sbjct: 68 HPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASG 127
Query: 122 LRYCHENDIIHRDIKPHCVLL-------ANKENSAP---VKLGGFGVAIQLQDGQLYCSG 171
+ + H IIHRD+KP +L+ A+++ A + + FG+ +L GQ
Sbjct: 128 VAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQX---- 183
Query: 172 GERLDHYTTKAGHRIGTPHYMAPEVIED 199
+ + GT + APE++E+
Sbjct: 184 -----XFRXNLNNPSGTSGWRAPELLEE 206
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 41/96 (42%), Gaps = 14/96 (14%)
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y QV + + IHRD+ +LL+ EN+ VK+ FG+A +
Sbjct: 204 YSFQVARGMEFLSSRKCIHRDLAARNILLS--ENNV-VKICDFGLARDIYKNP------- 253
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
Y K R+ +MAPE I D+ Y D+W
Sbjct: 254 ---DYVRKGDTRLPL-KWMAPESIFDKIYSTKSDVW 285
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 69/170 (40%), Gaps = 33/170 (19%)
Query: 52 LKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVA 111
L+ E + + HP++V T+ ++ L++V +M I G +E
Sbjct: 57 LQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGM--NELAI 114
Query: 112 SHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSG 171
++ ++ VL+AL Y H +HR +K +L++ DG++Y SG
Sbjct: 115 AYILQGVLKALDYIHHMGYVHRSVKASHILIS-------------------VDGKVYLSG 155
Query: 172 ----------GERLDHYTTKAGHRIGTPHYMAPEVIED--QKYGKPVDIW 209
G+R + + +++PEV++ Q Y DI+
Sbjct: 156 LRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIY 205
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 69/164 (42%), Gaps = 20/164 (12%)
Query: 49 EADLKREATICHMLKHPHVVELLETYSSEGM--LYMVFEYMDGSDICFEIVRRATAGFVY 106
+ D +RE I L +V+ G L +V EY+ S + ++R A
Sbjct: 55 QRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLP-SGCLRDFLQRHRARLDA 113
Query: 107 SEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQ 166
S + Y Q+ + + Y +HRD+ +L+ E+ A VK+ FG+A L +
Sbjct: 114 SRLLL--YSSQICKGMEYLGSRRCVHRDLAARNILV---ESEAHVKIADFGLAKLLPLDK 168
Query: 167 LYCSGGERLDHYTTKAGHRIGTP-HYMAPEVIEDQKYGKPVDIW 209
D+Y + + +P + APE + D + + D+W
Sbjct: 169 ---------DYYVVREPGQ--SPIFWYAPESLSDNIFSRQSDVW 201
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 64/150 (42%), Gaps = 27/150 (18%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYM-DGSDICFEIVRRATAGFVYSEAVAS 112
+E + +H ++VELL S L +V+ YM +GS ++ R + + S
Sbjct: 79 QEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGS-----LLDRLSC--LDGTPPLS 131
Query: 113 HYMR-----QVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQL 167
+MR + + HEN IHRDIK +LL + + K+ FG+A
Sbjct: 132 WHMRCKIAQGAANGINFLHENHHIHRDIKSANILL---DEAFTAKISDFGLA-------- 180
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVI 197
E+ T +GT YMAPE +
Sbjct: 181 --RASEKFAQ-TVMXSRIVGTTAYMAPEAL 207
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 69/170 (40%), Gaps = 33/170 (19%)
Query: 52 LKREATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVA 111
L+ E + + HP++V T+ ++ L++V +M I G +E
Sbjct: 73 LQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGM--NELAI 130
Query: 112 SHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSG 171
++ ++ VL+AL Y H +HR +K +L++ DG++Y SG
Sbjct: 131 AYILQGVLKALDYIHHMGYVHRSVKASHILIS-------------------VDGKVYLSG 171
Query: 172 ----------GERLDHYTTKAGHRIGTPHYMAPEVIED--QKYGKPVDIW 209
G+R + + +++PEV++ Q Y DI+
Sbjct: 172 LRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIY 221
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 41/97 (42%), Gaps = 16/97 (16%)
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL-QDGQLYCSGG 172
Y QV + + + IHRD+ +LL+ K VK+ FG+A + +D G
Sbjct: 149 YSFQVAKGMEFLASRKXIHRDLAARNILLSEKNV---VKIXDFGLARDIYKDPDYVRKGD 205
Query: 173 ERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
RL +MAPE I D+ Y D+W
Sbjct: 206 ARLPL------------KWMAPETIFDRVYTIQSDVW 230
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 69/164 (42%), Gaps = 20/164 (12%)
Query: 49 EADLKREATICHMLKHPHVVELLETYSSEGM--LYMVFEYMDGSDICFEIVRRATAGFVY 106
+ D +RE I L +V+ G L +V EY+ S + ++R A
Sbjct: 68 QRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLP-SGCLRDFLQRHRARLDA 126
Query: 107 SEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQ 166
S + Y Q+ + + Y +HRD+ +L+ E+ A VK+ FG+A L +
Sbjct: 127 SRLLL--YSSQICKGMEYLGSRRCVHRDLAARNILV---ESEAHVKIADFGLAKLLPLDK 181
Query: 167 LYCSGGERLDHYTTKAGHRIGTP-HYMAPEVIEDQKYGKPVDIW 209
D+Y + + +P + APE + D + + D+W
Sbjct: 182 ---------DYYVVREPGQ--SPIFWYAPESLSDNIFSRQSDVW 214
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 74/169 (43%), Gaps = 35/169 (20%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEGMLY----MVFEYMDGSDICFEIVRRATAGFVY 106
+ +RE I L HP++V+L G+++ MV E++ D+ ++ +A
Sbjct: 69 EFQREVFIMSNLNHPNIVKLY------GLMHNPPRMVMEFVPCGDLYHRLLDKAHP---I 119
Query: 107 SEAVASHYMRQVLEALRYCHEND--IIHRDIKPHCVLLANKENSAPV--KLGGFGVAIQL 162
+V M + + Y + I+HRD++ + L + + +APV K+ F ++ Q
Sbjct: 120 KWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQ- 178
Query: 163 QDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVI--EDQKYGKPVDIW 209
++ G +G +MAPE I E++ Y + D +
Sbjct: 179 ---SVHSVSG------------LLGNFQWMAPETIGAEEESYTEKADTY 212
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 69/164 (42%), Gaps = 20/164 (12%)
Query: 49 EADLKREATICHMLKHPHVVELLETYSSEGM--LYMVFEYMDGSDICFEIVRRATAGFVY 106
+ D +RE I L +V+ G L +V EY+ S + ++R A
Sbjct: 56 QRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLP-SGCLRDFLQRHRARLDA 114
Query: 107 SEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQ 166
S + Y Q+ + + Y +HRD+ +L+ E+ A VK+ FG+A L +
Sbjct: 115 SRLLL--YSSQICKGMEYLGSRRCVHRDLAARNILV---ESEAHVKIADFGLAKLLPLDK 169
Query: 167 LYCSGGERLDHYTTKAGHRIGTP-HYMAPEVIEDQKYGKPVDIW 209
D+Y + + +P + APE + D + + D+W
Sbjct: 170 ---------DYYVVREPGQ--SPIFWYAPESLSDNIFSRQSDVW 202
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 8/69 (11%)
Query: 130 IIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTP 189
I HRD+ VL+ +N + FG++++L +L G E A +GT
Sbjct: 141 ISHRDLNSRNVLV---KNDGTCVISDFGLSMRLTGNRLVRPGEE-----DNAAISEVGTI 192
Query: 190 HYMAPEVIE 198
YMAPEV+E
Sbjct: 193 RYMAPEVLE 201
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 16/94 (17%)
Query: 117 QVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLD 176
++ + + Y + N +HRD+ ++A VK+G FG+ + + Y GG+ L
Sbjct: 168 EIADGMAYLNANKFVHRDLAARNCMVAE---DFTVKIGDFGMTRDIYETDYYRKGGKGL- 223
Query: 177 HYTTKAGHRIGTP-HYMAPEVIEDQKYGKPVDIW 209
P +M+PE ++D + D+W
Sbjct: 224 -----------LPVRWMSPESLKDGVFTTYSDVW 246
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 64/160 (40%), Gaps = 20/160 (12%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEG-MLYMVFEYMDGSDICFEIVRRATAGFVYSEA 109
+L EA + L +P++V ++ +E ML M + + + R +
Sbjct: 416 ELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNII--- 472
Query: 110 VASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYC 169
+ QV ++Y E++ +HRD+ VLL + + K+ FG++ L+
Sbjct: 473 ---ELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYA---KISDFGLSKALRAD---- 522
Query: 170 SGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
++Y H + APE I K+ D+W
Sbjct: 523 ------ENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 556
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 64/160 (40%), Gaps = 20/160 (12%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEG-MLYMVFEYMDGSDICFEIVRRATAGFVYSEA 109
+L EA + L +P++V ++ +E ML M + + + R +
Sbjct: 417 ELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNII--- 473
Query: 110 VASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYC 169
+ QV ++Y E++ +HRD+ VLL + + K+ FG++ L+
Sbjct: 474 ---ELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYA---KISDFGLSKALRAD---- 523
Query: 170 SGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
++Y H + APE I K+ D+W
Sbjct: 524 ------ENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 557
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 41/93 (44%), Gaps = 14/93 (15%)
Query: 117 QVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLD 176
++ + + Y + N +HRD+ ++A VK+G FG+ + + Y GG+ L
Sbjct: 140 EIADGMAYLNANKFVHRDLAARNCMVAE---DFTVKIGDFGMTRDIYETDYYRKGGKGLL 196
Query: 177 HYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+M+PE ++D + D+W
Sbjct: 197 PV-----------RWMSPESLKDGVFTTYSDVW 218
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 41/93 (44%), Gaps = 14/93 (15%)
Query: 117 QVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLD 176
++ + + Y + N +HRD+ ++A VK+G FG+ + + Y GG+ L
Sbjct: 137 EIADGMAYLNANKFVHRDLAARNCMVAE---DFTVKIGDFGMTRDIYETDYYRKGGKGLL 193
Query: 177 HYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+M+PE ++D + D+W
Sbjct: 194 PV-----------RWMSPESLKDGVFTTYSDVW 215
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 36.2 bits (82), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 41/93 (44%), Gaps = 14/93 (15%)
Query: 117 QVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLD 176
++ + + Y + N +HRD+ ++A VK+G FG+ + + Y GG+ L
Sbjct: 133 EIADGMAYLNANKFVHRDLAARNCMVAE---DFTVKIGDFGMTRDIYETDYYRKGGKGLL 189
Query: 177 HYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+M+PE ++D + D+W
Sbjct: 190 PV-----------RWMSPESLKDGVFTTYSDVW 211
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 36.2 bits (82), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 90/239 (37%), Gaps = 45/239 (18%)
Query: 1 MLSVDPNKRITIHEVINHKW--LKMKLHTSAEIEPASFGL-------------PDERLNH 45
M SV+P + +W + K+ S E+ SFG+ P+ R+
Sbjct: 1 MASVNPEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAI 60
Query: 46 YT-TEADLKRE-------ATICHMLKHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIV 97
T EA RE A++ HVV LL S ++ E M D+ +
Sbjct: 61 KTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLK-SYL 119
Query: 98 RRATAGFVYSEAVASHYMRQVLE-------ALRYCHENDIIHRDIKPHCVLLANKENSAP 150
R + +A + ++++ + Y + N +HRD+ ++A
Sbjct: 120 RSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE---DFT 176
Query: 151 VKLGGFGVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
VK+G FG+ + + Y GG+ L +M+PE ++D + D+W
Sbjct: 177 VKIGDFGMTRDIYETDYYRKGGKGLLPV-----------RWMSPESLKDGVFTTYSDVW 224
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 41/93 (44%), Gaps = 14/93 (15%)
Query: 117 QVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLD 176
++ + + Y + N +HRD+ ++A VK+G FG+ + + Y GG+ L
Sbjct: 139 EIADGMAYLNANKFVHRDLAARNCMVAE---DFTVKIGDFGMTRDIYETDYYRKGGKGLL 195
Query: 177 HYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+M+PE ++D + D+W
Sbjct: 196 PV-----------RWMSPESLKDGVFTTYSDVW 217
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 3/97 (3%)
Query: 63 KHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEAL 122
+HPH+V L+ + ++++YM+ ++ + S L
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 123 RYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVA 159
Y H IIHRD+K +LL EN P K+ FG++
Sbjct: 153 HYLHTRAIIHRDVKSINILL--DENFVP-KITDFGIS 186
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 64/150 (42%), Gaps = 27/150 (18%)
Query: 54 REATICHMLKHPHVVELLETYSSEGMLYMVFEYM-DGSDICFEIVRRATAGFVYSEAVAS 112
+E + +H ++VELL S L +V+ YM +GS ++ R + + S
Sbjct: 79 QEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGS-----LLDRLSC--LDGTPPLS 131
Query: 113 HYMR-----QVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQL 167
+MR + + HEN IHRDIK +LL + + K+ FG+A
Sbjct: 132 WHMRCKIAQGAANGINFLHENHHIHRDIKSANILL---DEAFTAKISDFGLA-------- 180
Query: 168 YCSGGERLDHYTTKAGHRIGTPHYMAPEVI 197
E+ T +GT YMAPE +
Sbjct: 181 --RASEKFAQ-TVMXXRIVGTTAYMAPEAL 207
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 64/160 (40%), Gaps = 20/160 (12%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEG-MLYMVFEYMDGSDICFEIVRRATAGFVYSEA 109
+L EA + L +P++V ++ +E ML M + + + R +
Sbjct: 72 ELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNII--- 128
Query: 110 VASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYC 169
+ QV ++Y E++ +HRD+ VLL + + K+ FG++ L+ +
Sbjct: 129 ---ELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYA---KISDFGLSKALRADE--- 179
Query: 170 SGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+Y H + APE I K+ D+W
Sbjct: 180 -------NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 212
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 41/93 (44%), Gaps = 14/93 (15%)
Query: 117 QVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLD 176
++ + + Y + N +HRD+ ++A VK+G FG+ + + Y GG+ L
Sbjct: 139 EIADGMAYLNANKFVHRDLAARNCMVAE---DFTVKIGDFGMTRDIYETDYYRKGGKGLL 195
Query: 177 HYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+M+PE ++D + D+W
Sbjct: 196 PV-----------RWMSPESLKDGVFTTYSDVW 217
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 41/97 (42%), Gaps = 16/97 (16%)
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL-QDGQLYCSGG 172
Y QV + + + IHRD+ +LL+ K VK+ FG+A + +D G
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV---VKICDFGLARDIXKDPDXVRKGD 200
Query: 173 ERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
RL +MAPE I D+ Y D+W
Sbjct: 201 ARLPL------------KWMAPETIFDRVYTIQSDVW 225
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 3/97 (3%)
Query: 63 KHPHVVELLETYSSEGMLYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEAL 122
+HPH+V L+ + ++++YM+ ++ + S L
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 123 RYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVA 159
Y H IIHRD+K +LL EN P K+ FG++
Sbjct: 153 HYLHTRAIIHRDVKSINILL--DENFVP-KITDFGIS 186
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 35.8 bits (81), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 40/96 (41%), Gaps = 14/96 (14%)
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y QV + + + IHRD+ +LL+ K VK+ FG+A +
Sbjct: 196 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV---VKICDFGLARDIYKDP------- 245
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
Y K R+ +MAPE I D+ Y D+W
Sbjct: 246 ---DYVRKGDARLPL-KWMAPETIFDRVYTIQSDVW 277
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 35.8 bits (81), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 40/96 (41%), Gaps = 14/96 (14%)
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y QV + + + IHRD+ +LL+ K VK+ FG+A +
Sbjct: 149 YSFQVAKGMEFLASRKXIHRDLAARNILLSEKNV---VKICDFGLARDIYKDP------- 198
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
Y K R+ +MAPE I D+ Y D+W
Sbjct: 199 ---DYVRKGDARLPL-KWMAPETIFDRVYTIQSDVW 230
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 35.8 bits (81), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 41/97 (42%), Gaps = 16/97 (16%)
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL-QDGQLYCSGG 172
Y QV + + + IHRD+ +LL+ K VK+ FG+A + +D G
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV---VKICDFGLARDIXKDPDXVRKGD 200
Query: 173 ERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
RL +MAPE I D+ Y D+W
Sbjct: 201 ARLPL------------KWMAPETIFDRVYTIQSDVW 225
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 40/96 (41%), Gaps = 14/96 (14%)
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y QV + + + IHRD+ +LL+ K VK+ FG+A +
Sbjct: 198 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV---VKICDFGLARDIYKDP------- 247
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
Y K R+ +MAPE I D+ Y D+W
Sbjct: 248 ---DYVRKGDARLPL-KWMAPETIFDRVYTIQSDVW 279
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 40/96 (41%), Gaps = 14/96 (14%)
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y QV + + + IHRD+ +LL+ K VK+ FG+A +
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV---VKICDFGLARDIYKDP------- 193
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
Y K R+ +MAPE I D+ Y D+W
Sbjct: 194 ---DYVRKGDARLPL-KWMAPETIFDRVYTIQSDVW 225
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 41/97 (42%), Gaps = 16/97 (16%)
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL-QDGQLYCSGG 172
Y QV + + + IHRD+ +LL+ K VK+ FG+A + +D G
Sbjct: 153 YSFQVAKGMEFLASRKXIHRDLAARNILLSEKNV---VKICDFGLARDIXKDPDXVRKGD 209
Query: 173 ERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
RL +MAPE I D+ Y D+W
Sbjct: 210 ARLPL------------KWMAPETIFDRVYTIQSDVW 234
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 64/160 (40%), Gaps = 20/160 (12%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEG-MLYMVFEYMDGSDICFEIVRRATAGFVYSEA 109
+L EA + L +P++V ++ +E ML M + + + R +
Sbjct: 52 ELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNII--- 108
Query: 110 VASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYC 169
+ QV ++Y E++ +HRD+ VLL + + K+ FG++ L+ +
Sbjct: 109 ---ELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYA---KISDFGLSKALRADE--- 159
Query: 170 SGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+Y H + APE I K+ D+W
Sbjct: 160 -------NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 192
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 64/160 (40%), Gaps = 20/160 (12%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEG-MLYMVFEYMDGSDICFEIVRRATAGFVYSEA 109
+L EA + L +P++V ++ +E ML M + + + R +
Sbjct: 64 ELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNII--- 120
Query: 110 VASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYC 169
+ QV ++Y E++ +HRD+ VLL + + K+ FG++ L+ +
Sbjct: 121 ---ELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYA---KISDFGLSKALRADE--- 171
Query: 170 SGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+Y H + APE I K+ D+W
Sbjct: 172 -------NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 204
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 40/96 (41%), Gaps = 14/96 (14%)
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y QV + + + IHRD+ +LL+ K VK+ FG+A +
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV---VKICDFGLARDIYKDP------- 202
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
Y K R+ +MAPE I D+ Y D+W
Sbjct: 203 ---DYVRKGDARLPL-KWMAPETIFDRVYTIQSDVW 234
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 40/96 (41%), Gaps = 14/96 (14%)
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y QV + + + IHRD+ +LL+ K VK+ FG+A +
Sbjct: 144 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV---VKICDFGLARDIYKDP------- 193
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
Y K R+ +MAPE I D+ Y D+W
Sbjct: 194 ---DYVRKGDARLPL-KWMAPETIFDRVYTIQSDVW 225
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 35.8 bits (81), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 40/96 (41%), Gaps = 14/96 (14%)
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y QV + + + IHRD+ +LL+ K VK+ FG+A +
Sbjct: 190 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV---VKICDFGLARDIYKDP------- 239
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
Y K R+ +MAPE I D+ Y D+W
Sbjct: 240 ---DYVRKGDARLPL-KWMAPETIFDRVYTIQSDVW 271
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 35.8 bits (81), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 64/160 (40%), Gaps = 20/160 (12%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEG-MLYMVFEYMDGSDICFEIVRRATAGFVYSEA 109
+L EA + L +P++V ++ +E ML M + + + R +
Sbjct: 54 ELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNII--- 110
Query: 110 VASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYC 169
+ QV ++Y E++ +HRD+ VLL + + K+ FG++ L+ +
Sbjct: 111 ---ELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYA---KISDFGLSKALRADE--- 161
Query: 170 SGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+Y H + APE I K+ D+W
Sbjct: 162 -------NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 194
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 35.8 bits (81), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 64/160 (40%), Gaps = 20/160 (12%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEG-MLYMVFEYMDGSDICFEIVRRATAGFVYSEA 109
+L EA + L +P++V ++ +E ML M + + + R +
Sbjct: 58 ELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNII--- 114
Query: 110 VASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYC 169
+ QV ++Y E++ +HRD+ VLL + + K+ FG++ L+ +
Sbjct: 115 ---ELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYA---KISDFGLSKALRADE--- 165
Query: 170 SGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+Y H + APE I K+ D+W
Sbjct: 166 -------NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 198
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 35.8 bits (81), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 64/160 (40%), Gaps = 20/160 (12%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEG-MLYMVFEYMDGSDICFEIVRRATAGFVYSEA 109
+L EA + L +P++V ++ +E ML M + + + R +
Sbjct: 74 ELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNII--- 130
Query: 110 VASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYC 169
+ QV ++Y E++ +HRD+ VLL + + K+ FG++ L+ +
Sbjct: 131 ---ELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYA---KISDFGLSKALRADE--- 181
Query: 170 SGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+Y H + APE I K+ D+W
Sbjct: 182 -------NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 214
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 35.8 bits (81), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 64/160 (40%), Gaps = 20/160 (12%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEG-MLYMVFEYMDGSDICFEIVRRATAGFVYSEA 109
+L EA + L +P++V ++ +E ML M + + + R +
Sbjct: 74 ELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNII--- 130
Query: 110 VASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYC 169
+ QV ++Y E++ +HRD+ VLL + + K+ FG++ L+ +
Sbjct: 131 ---ELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYA---KISDFGLSKALRADE--- 181
Query: 170 SGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+Y H + APE I K+ D+W
Sbjct: 182 -------NYYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 214
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 35.8 bits (81), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 41/97 (42%), Gaps = 16/97 (16%)
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL-QDGQLYCSGG 172
Y QV + + + IHRD+ +LL+ K VK+ FG+A + +D G
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV---VKICDFGLARDIXKDPDXVRKGD 209
Query: 173 ERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
RL +MAPE I D+ Y D+W
Sbjct: 210 ARLPL------------KWMAPETIFDRVYTIQSDVW 234
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 35.8 bits (81), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 40/96 (41%), Gaps = 14/96 (14%)
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y QV + + + IHRD+ +LL+ K VK+ FG+A +
Sbjct: 203 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV---VKICDFGLARDIYKDP------- 252
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
Y K R+ +MAPE I D+ Y D+W
Sbjct: 253 ---DYVRKGDARLPL-KWMAPETIFDRVYTIQSDVW 284
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 35.8 bits (81), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 41/97 (42%), Gaps = 16/97 (16%)
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL-QDGQLYCSGG 172
Y QV + + + IHRD+ +LL+ K VK+ FG+A + +D G
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV---VKICDFGLARDIXKDPDXVRKGD 209
Query: 173 ERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
RL +MAPE I D+ Y D+W
Sbjct: 210 ARLPL------------KWMAPETIFDRVYTIQSDVW 234
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 35.8 bits (81), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 41/97 (42%), Gaps = 16/97 (16%)
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQL-QDGQLYCSGG 172
Y QV + + + IHRD+ +LL+ K VK+ FG+A + +D G
Sbjct: 153 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV---VKICDFGLARDIYKDPDXVRKGD 209
Query: 173 ERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
RL +MAPE I D+ Y D+W
Sbjct: 210 ARLPL------------KWMAPETIFDRVYTIQSDVW 234
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 35.8 bits (81), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 40/96 (41%), Gaps = 14/96 (14%)
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y QV + + + IHRD+ +LL+ K VK+ FG+A +
Sbjct: 155 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV---VKICDFGLARDIYKDP------- 204
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
Y K R+ +MAPE I D+ Y D+W
Sbjct: 205 ---DYVRKGDARLPL-KWMAPETIFDRVYTIQSDVW 236
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 35.8 bits (81), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 40/96 (41%), Gaps = 14/96 (14%)
Query: 114 YMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGE 173
Y QV + + + IHRD+ +LL+ K VK+ FG+A +
Sbjct: 205 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNV---VKICDFGLARDIYKDP------- 254
Query: 174 RLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
Y K R+ +MAPE I D+ Y D+W
Sbjct: 255 ---DYVRKGDARLPL-KWMAPETIFDRVYTIQSDVW 286
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 35.8 bits (81), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 64/161 (39%), Gaps = 22/161 (13%)
Query: 51 DLKREATICHMLKHPHVVELLETYSSEG-MLYMVFEYMDGSDICFEIVRRATAGFVYSEA 109
+L EA + L +P++V ++ +E ML M + + + R +
Sbjct: 58 ELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNII--- 114
Query: 110 VASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYC 169
+ QV ++Y E++ +HRD+ VLL + + K+ FG++ L
Sbjct: 115 ---ELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYA---KISDFGLSKAL------- 161
Query: 170 SGGERLDHYTTKAGHRIGTP-HYMAPEVIEDQKYGKPVDIW 209
R D KA P + APE I K+ D+W
Sbjct: 162 ----RADENXYKAQTHGKWPVKWYAPECINYYKFSSKSDVW 198
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 35.4 bits (80), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 36/173 (20%), Positives = 69/173 (39%), Gaps = 21/173 (12%)
Query: 39 PDERLNHYTTEADLKREATICHMLKHPHVVELLETYSSEG--MLYMVFEYMDGSDICFEI 96
P+ NH ADLK+E I L H ++V+ + +G + ++ E++ + +
Sbjct: 48 PESGGNHI---ADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL 104
Query: 97 VRRATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGF 156
+ + + Y Q+ + + Y +HRD+ VL+ E+ VK+G F
Sbjct: 105 PKNKNKINLKQQL---KYAVQICKGMDYLGSRQYVHRDLAARNVLV---ESEHQVKIGDF 158
Query: 157 GVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
G+ ++ + T R + APE + K+ D+W
Sbjct: 159 GLTKAIETDK----------EXXTVKDDRDSPVFWYAPECLMQSKFYIASDVW 201
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 35.4 bits (80), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 36/173 (20%), Positives = 69/173 (39%), Gaps = 21/173 (12%)
Query: 39 PDERLNHYTTEADLKREATICHMLKHPHVVELLETYSSEG--MLYMVFEYMDGSDICFEI 96
P+ NH ADLK+E I L H ++V+ + +G + ++ E++ + +
Sbjct: 60 PESGGNHI---ADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL 116
Query: 97 VRRATAGFVYSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGF 156
+ + + Y Q+ + + Y +HRD+ VL+ E+ VK+G F
Sbjct: 117 PKNKNKINLKQQL---KYAVQICKGMDYLGSRQYVHRDLAARNVLV---ESEHQVKIGDF 170
Query: 157 GVAIQLQDGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
G+ ++ + T R + APE + K+ D+W
Sbjct: 171 GLTKAIETDK----------EXXTVKDDRDSPVFWYAPECLMQSKFYIASDVW 213
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 35.4 bits (80), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 8/81 (9%)
Query: 67 VVELLETYSSEGM----LYMVFEYMDGSDICFEIVRRATAGFVYSEAVASHYMRQVLEAL 122
VV+L++ + GM + MVFE + G + I++ G +RQVL+ L
Sbjct: 97 VVQLIDDFKISGMNGIHVCMVFEVL-GHHLLKWIIKSNYQGLPVR--CVKSIIRQVLQGL 153
Query: 123 RYCHEN-DIIHRDIKPHCVLL 142
Y H IIH DIKP +L+
Sbjct: 154 DYLHSKCKIIHTDIKPENILM 174
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 35.0 bits (79), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 27/50 (54%)
Query: 117 QVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQ 166
Q++ + Y H + IHRD+KP L+ + V + FG+A + +D +
Sbjct: 111 QMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDAR 160
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 35.0 bits (79), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 27/50 (54%)
Query: 117 QVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQ 166
Q++ + Y H + IHRD+KP L+ + V + FG+A + +D +
Sbjct: 113 QMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDAR 162
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 35.0 bits (79), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 41/93 (44%), Gaps = 14/93 (15%)
Query: 117 QVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLD 176
++ + + Y + +HRD+ ++A+ VK+G FG+ + + Y GG+ L
Sbjct: 138 EIADGMAYLNAKKFVHRDLAARNCMVAH---DFTVKIGDFGMTRDIYETDYYRKGGKGLL 194
Query: 177 HYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+MAPE ++D + D+W
Sbjct: 195 PV-----------RWMAPESLKDGVFTTSSDMW 216
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 35.0 bits (79), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 23/156 (14%)
Query: 54 REATICH--MLKHPHVVELLETYSSEG----MLYMVFEYMDGSDICFEIVRRATA---GF 104
REA I ML+H +++ + + + L++V +Y + + F+ + R T G
Sbjct: 83 REAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSL-FDYLNRYTVTVEGM 141
Query: 105 V-YSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQ 163
+ + + AS +E + + I HRD+K +L+ K+N + G+A++
Sbjct: 142 IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV--KKNGTCC-IADLGLAVR-- 196
Query: 164 DGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIED 199
+ S + +D HR+GT YMAPEV++D
Sbjct: 197 ----HDSATDTID---IAPNHRVGTKRYMAPEVLDD 225
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 35.0 bits (79), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 41/93 (44%), Gaps = 14/93 (15%)
Query: 117 QVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQLYCSGGERLD 176
++ + + Y + +HRD+ ++A+ VK+G FG+ + + Y GG+ L
Sbjct: 137 EIADGMAYLNAKKFVHRDLAARNCMVAH---DFTVKIGDFGMTRDIYETDYYRKGGKGLL 193
Query: 177 HYTTKAGHRIGTPHYMAPEVIEDQKYGKPVDIW 209
+MAPE ++D + D+W
Sbjct: 194 PV-----------RWMAPESLKDGVFTTSSDMW 215
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 35.0 bits (79), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 27/50 (54%)
Query: 117 QVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQDGQ 166
Q++ + Y H + IHRD+KP L+ + V + FG+A + +D +
Sbjct: 113 QMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDAR 162
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 35.0 bits (79), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 74/156 (47%), Gaps = 23/156 (14%)
Query: 54 REATICH--MLKHPHVVELLETYSSEG----MLYMVFEYMDGSDICFEIVRRATA---GF 104
REA I ML+H +++ + + + L++V +Y + + F+ + R T G
Sbjct: 70 REAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSL-FDYLNRYTVTVEGM 128
Query: 105 V-YSEAVASHYMRQVLEALRYCHENDIIHRDIKPHCVLLANKENSAPVKLGGFGVAIQLQ 163
+ + + AS +E + + I HRD+K +L+ K+N + G+A++
Sbjct: 129 IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV--KKNGTCC-IADLGLAVR-- 183
Query: 164 DGQLYCSGGERLDHYTTKAGHRIGTPHYMAPEVIED 199
+ S + +D HR+GT YMAPEV++D
Sbjct: 184 ----HDSATDTID---IAPNHRVGTKRYMAPEVLDD 212
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.138 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,304,586
Number of Sequences: 62578
Number of extensions: 288335
Number of successful extensions: 3004
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 832
Number of HSP's successfully gapped in prelim test: 249
Number of HSP's that attempted gapping in prelim test: 790
Number of HSP's gapped (non-prelim): 1379
length of query: 249
length of database: 14,973,337
effective HSP length: 96
effective length of query: 153
effective length of database: 8,965,849
effective search space: 1371774897
effective search space used: 1371774897
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 50 (23.9 bits)