Query psy14628
Match_columns 161
No_of_seqs 130 out of 172
Neff 5.2
Searched_HMMs 29240
Date Fri Aug 16 16:35:17 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14628.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14628hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lra_A Disks large homolog 1, 99.8 1.4E-20 4.9E-25 157.6 4.6 93 57-161 76-169 (254)
2 3uit_A INAD-like protein, magu 99.7 1.3E-18 4.3E-23 146.3 5.3 93 57-161 80-176 (265)
3 1rso_B MLIN-2/CASK, peripheral 99.4 1.8E-13 6.3E-18 90.5 4.4 51 55-105 5-55 (56)
4 3gp2_B Calcium/calmodulin-depe 98.6 1.3E-08 4.5E-13 55.5 1.1 19 15-33 2-20 (22)
5 1y74_B MLIN-2/CASK, peripheral 98.1 4.9E-07 1.7E-11 57.8 0.5 34 117-161 1-34 (50)
6 3c0i_A Peripheral plasma membr 97.1 0.00015 5.2E-09 59.9 1.9 53 3-55 299-351 (351)
7 3uit_A INAD-like protein, magu 95.9 0.017 5.7E-07 48.6 6.8 69 58-129 144-224 (265)
8 1y74_B MLIN-2/CASK, peripheral 93.4 0.052 1.8E-06 34.0 2.6 28 78-105 19-46 (50)
9 3soa_A Calcium/calmodulin-depe 92.8 0.031 1.1E-06 48.3 1.3 32 3-34 280-311 (444)
10 1vf6_C Maguk P55 subfamily mem 92.7 0.1 3.5E-06 35.5 3.4 48 58-105 15-64 (72)
11 2bdw_A Hypothetical protein K1 91.3 0.13 4.3E-06 42.7 3.2 29 3-31 297-325 (362)
12 3lra_A Disks large homolog 1, 88.3 0.27 9.4E-06 40.9 2.9 31 79-109 155-185 (254)
13 1mxe_E CAM kinase I, target se 72.7 1.3 4.6E-05 24.0 1.1 17 13-29 1-17 (26)
14 1zl8_A LIN-7; heterodimer, alp 62.5 9.7 0.00033 24.4 3.7 45 58-102 8-52 (53)
15 1vf6_A PALS-1, PALS1-associate 26.7 65 0.0022 22.3 3.5 30 76-105 24-53 (83)
No 1
>3lra_A Disks large homolog 1, maguk P55 subfamily member protein LIN-7 homolog C; tripartite complex, L27 tetramer, cell junction; 2.95A {Homo sapiens} PDB: 1rso_A
Probab=99.80 E-value=1.4e-20 Score=157.58 Aligned_cols=93 Identities=17% Similarity=0.273 Sum_probs=82.5
Q ss_pred HHHHHHHhhhhh-hhhhhhhcccchHHHHHhhchhhHHHHHHHHhhhcccccCCCCCCCCcHHHHHHHHHHHHhhccCCC
Q psy14628 57 SAISMILESLDD-IECLQEQLYEDKTMMNSLLEDKQLHILLELYDKISSKVISPNRTPPSDVVTRCRDALDIIRDFERSV 135 (161)
Q Consensus 57 ~av~qVLdsL~d-I~~l~~a~~~D~~fL~~ll~d~~L~sLLkvydrL~~~~~~~~~~~~~~a~~l~~evle~L~~~~~s~ 135 (161)
+||++||++|.+ |++++++ +.|++||+++|++|+||+|+|+||||+.+...+..|+.++|+++++||++.|+..+++
T Consensus 76 ~gv~qVLdsL~e~L~~~~~~-d~Dl~FLk~lL~sp~L~sLlkihd~L~~~~~~~~~Pv~~~A~~La~EVle~L~~~~~s- 153 (254)
T 3lra_A 76 TGLYELLAALPAQLQPHVDS-QEDLTFLWDMFGEKSLHSLVKIHEKLHYYEKQSPVPILHGAAALADDLAEELQNKPLN- 153 (254)
T ss_dssp SSHHHHHHTHHHHHTTTCCC-TTHHHHHHHHC---CHHHHHHHHHHHHHHHTTCCCCSCSCHHHHHHHHHHHHHTSCCC-
T ss_pred chHHHHHHHHHHhhhcccCC-cccHHHHHHHHcCHHHHHHHHHHHHHHhccCCCCCCCchhHHHHHHHHHHHHhhcCCC-
Confidence 599999999966 9999998 7899999999999999999999999999876666777789999999999999988876
Q ss_pred CCccccccccccHHHHHHhhhCCCCC
Q psy14628 136 SPTDVELDLSGDFEELKQILTSPHFK 161 (161)
Q Consensus 136 ~~~~~~~~~~~~~~EL~~LL~~PHfq 161 (161)
++ ++||.+||++||||
T Consensus 154 --~e--------a~EL~~LLs~PHfQ 169 (254)
T 3lra_A 154 --SE--------IRELLKLLSKPNVK 169 (254)
T ss_dssp --HH--------HHHHHHHTTSHHHH
T ss_pred --hH--------HHHHHHHhcCHHHH
Confidence 67 99999999999996
No 2
>3uit_A INAD-like protein, maguk P55 subfamily member 5, LIN-7 homolog B; L27 domain, cell polarization, cell adhesion; 2.05A {Mus musculus} PDB: 1y76_A 1y76_B 1y74_A
Probab=99.73 E-value=1.3e-18 Score=146.29 Aligned_cols=93 Identities=17% Similarity=0.293 Sum_probs=81.6
Q ss_pred HHHHHHHhhhhhh-hhhhhh-cccchHHHHHhhchhhHHHHHHHHhhhccc-ccCC-CCCCCCcHHHHHHHHHHHHhhcc
Q psy14628 57 SAISMILESLDDI-ECLQEQ-LYEDKTMMNSLLEDKQLHILLELYDKISSK-VISP-NRTPPSDVVTRCRDALDIIRDFE 132 (161)
Q Consensus 57 ~av~qVLdsL~dI-~~l~~a-~~~D~~fL~~ll~d~~L~sLLkvydrL~~~-~~~~-~~~~~~~a~~l~~evle~L~~~~ 132 (161)
..+++||+||++| ++++++ ..+|++||+++|++|+||+|+||||||+.+ ...+ ..|+.++|++++.||++.|+. .
T Consensus 80 ~~~~qLLdSL~eI~~~L~d~~sqeDl~FL~~LLesp~L~sLlKIHerL~~~~e~~~p~~PV~~nA~eLa~EVle~L~~-~ 158 (265)
T 3uit_A 80 LEIEDLFSSLKHIQHTLVDSQSQEDISLLLQLVQNKDFQNAFKIHNAITVHMNKASPPFPLISNAQDLAQEVQTVLKP-V 158 (265)
T ss_dssp CCHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHSCCSCCCCSCSCHHHHHHHHHHHHTT-T
T ss_pred hHHHHHHHHHHHHHHHhccccccccHHHHHHHHcCHHHHHHHHHHHHHHHhcccCCCCCCCcchHHHHHHHHHHHhhc-C
Confidence 3699999999999 778876 467999999999999999999999999887 3433 677778999999999999988 4
Q ss_pred CCCCCccccccccccHHHHHHhhhCCCCC
Q psy14628 133 RSVSPTDVELDLSGDFEELKQILTSPHFK 161 (161)
Q Consensus 133 ~s~~~~~~~~~~~~~~~EL~~LL~~PHfq 161 (161)
++ ++ ++||.+||++||||
T Consensus 159 ~s---~e--------a~EL~~LLs~PHfQ 176 (265)
T 3uit_A 159 HH---KE--------GQELTALLNTPHIQ 176 (265)
T ss_dssp CC---HH--------HHHHHHHHHSHHHH
T ss_pred CC---hH--------HHHHHHHHhCHHHH
Confidence 45 67 99999999999986
No 3
>1rso_B MLIN-2/CASK, peripheral plasma membrane protein CASK; L27 domain, scaffold protein, protein assembly, cell polarity; NMR {Rattus norvegicus} SCOP: a.194.1.1
Probab=99.40 E-value=1.8e-13 Score=90.54 Aligned_cols=51 Identities=39% Similarity=0.716 Sum_probs=47.5
Q ss_pred chHHHHHHHhhhhhhhhhhhhcccchHHHHHhhchhhHHHHHHHHhhhccc
Q psy14628 55 TSSAISMILESLDDIECLQEQLYEDKTMMNSLLEDKQLHILLELYDKISSK 105 (161)
Q Consensus 55 ~~~av~qVLdsL~dI~~l~~a~~~D~~fL~~ll~d~~L~sLLkvydrL~~~ 105 (161)
..+||++||++|+++..++++.++|++||+++|+||+||+|+|+||||++.
T Consensus 5 ~~~~v~~vL~sL~~i~~l~~~~~~d~~fL~~ll~~~~L~~Llkvhdki~~~ 55 (56)
T 1rso_B 5 AERAVSQVLDSLEEIHALTDSSEKDLDFLHSVFQDQHLHTLLDLYDKINTK 55 (56)
T ss_dssp TTHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHTT
T ss_pred hhhHHHHHHHHHHHHHhcccccccCHHHHHHHHcCHHHHHHHHHHHHHHcc
Confidence 346999999999999999998789999999999999999999999999864
No 4
>3gp2_B Calcium/calmodulin-dependent protein kinase type II delta chain; metal binding protein, ATP-binding, calmodulin- binding, nucleotide-binding; 1.46A {Homo sapiens}
Probab=98.57 E-value=1.3e-08 Score=55.51 Aligned_cols=19 Identities=47% Similarity=0.861 Sum_probs=17.3
Q ss_pred hhhhhhhhhhHHHHhhcCC
Q psy14628 15 KFNVRRRLKGAVLNAISSP 33 (161)
Q Consensus 15 ~fn~rrklk~~~~~~~~~~ 33 (161)
|||+||||||+|++++...
T Consensus 2 kFNaRRKLK~aIl~~~~~t 20 (22)
T 3gp2_B 2 SFNARRKLKGAILTTMLAT 20 (26)
T ss_pred cccHHHHHHHHHHHHHHHh
Confidence 8999999999999998754
No 5
>1y74_B MLIN-2/CASK, peripheral plasma membrane protein CASK; L27 domain, scaffold protein, protein assembly, cell polarity, transport protein; NMR {Mus musculus} SCOP: a.194.1.1 PDB: 1zl8_B
Probab=98.10 E-value=4.9e-07 Score=57.79 Aligned_cols=34 Identities=41% Similarity=0.696 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHhhccCCCCCccccccccccHHHHHHhhhCCCCC
Q psy14628 117 VVTRCRDALDIIRDFERSVSPTDVELDLSGDFEELKQILTSPHFK 161 (161)
Q Consensus 117 a~~l~~evle~L~~~~~s~~~~~~~~~~~~~~~EL~~LL~~PHfq 161 (161)
|.+|+.||++.|++.+++ ++ ++||.+||++||||
T Consensus 1 A~~l~~ev~~~L~~~~~~---~~--------~~EL~~lL~~PHfq 34 (50)
T 1y74_B 1 AVQRAKEVLEEISCYPEN---ND--------AKELKRILTQPHFM 34 (50)
T ss_dssp CHHHHHHHHHHHHTCSSC---HH--------HHHHHHHHHSHHHH
T ss_pred ChHHHHHHHHHHhcCCCC---hH--------HHHHHHHHcCHHHH
Confidence 468999999999998876 77 99999999999996
No 6
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=97.10 E-value=0.00015 Score=59.93 Aligned_cols=53 Identities=43% Similarity=0.607 Sum_probs=16.7
Q ss_pred ccchHHHHHHHhhhhhhhhhhhHHHHhhcCCCCCCCCCCcCCCCCccCccccc
Q psy14628 3 TFISHDCVEELKKFNVRRRLKGAVLNAISSPKWNATDLDAQDHFSDCGEDELT 55 (161)
Q Consensus 3 ~~~~~~tv~~l~~fn~rrklk~~~~~~~~~~~~~~~~~~~~~~~~d~~dd~~~ 55 (161)
..+..++++.|++||+|||+|+++++++++.++..++.+++...++|++++++
T Consensus 299 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (351)
T 3c0i_A 299 KIHLPETVEQLRKFNARRKLKGAVLAAVSSHKFNSFYGDPPEELPDFSEDPTS 351 (351)
T ss_dssp CSCCHHHHHHHHHHHHHHC----------------------------------
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCChhhcccCCCCCCC
Confidence 34677899999999999999999999999999999998888888888887763
No 7
>3uit_A INAD-like protein, maguk P55 subfamily member 5, LIN-7 homolog B; L27 domain, cell polarization, cell adhesion; 2.05A {Mus musculus} PDB: 1y76_A 1y76_B 1y74_A
Probab=95.93 E-value=0.017 Score=48.56 Aligned_cols=69 Identities=16% Similarity=0.188 Sum_probs=47.1
Q ss_pred HHHHHHhhhhhhhhhhhhcccchHHHHHhhchhhHHHHHHHHhhhcccccCCCCCCCCc------H------HHHHHHHH
Q psy14628 58 AISMILESLDDIECLQEQLYEDKTMMNSLLEDKQLHILLELYDKISSKVISPNRTPPSD------V------VTRCRDAL 125 (161)
Q Consensus 58 av~qVLdsL~dI~~l~~a~~~D~~fL~~ll~d~~L~sLLkvydrL~~~~~~~~~~~~~~------a------~~l~~evl 125 (161)
|+...-+-++++.. .. ..+..=|..+|.+|.+++||.+||.+......|+.|++++ . +.++-|++
T Consensus 144 A~eLa~EVle~L~~-~~--s~ea~EL~~LLs~PHfQALL~AHD~VAqK~yeP~lP~l~~~~~~~~~~~~~~d~~r~~~l~ 220 (265)
T 3uit_A 144 AQDLAQEVQTVLKP-VH--HKEGQELTALLNTPHIQALLLAHDKVAEQEMGGGLEVLFQGPALVEPLGLERDVSRAVELL 220 (265)
T ss_dssp HHHHHHHHHHHHTT-TC--CHHHHHHHHHHHSHHHHHHHHHHHHHHHSSSCCCGGGGGSGGGCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhc-CC--ChHHHHHHHHHhCHHHHHHHHHHHHHHHHhccCCCCCCCCCccccCCcchHHHHHHHHHHH
Confidence 44444444444443 11 2355568999999999999999999999988887777766 4 45555555
Q ss_pred HHHh
Q psy14628 126 DIIR 129 (161)
Q Consensus 126 e~L~ 129 (161)
+.|+
T Consensus 221 ~~l~ 224 (265)
T 3uit_A 221 ERLQ 224 (265)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5555
No 8
>1y74_B MLIN-2/CASK, peripheral plasma membrane protein CASK; L27 domain, scaffold protein, protein assembly, cell polarity, transport protein; NMR {Mus musculus} SCOP: a.194.1.1 PDB: 1zl8_B
Probab=93.37 E-value=0.052 Score=34.03 Aligned_cols=28 Identities=18% Similarity=0.349 Sum_probs=24.6
Q ss_pred cchHHHHHhhchhhHHHHHHHHhhhccc
Q psy14628 78 EDKTMMNSLLEDKQLHILLELYDKISSK 105 (161)
Q Consensus 78 ~D~~fL~~ll~d~~L~sLLkvydrL~~~ 105 (161)
.+..-|..+|..|.+++||++||.+...
T Consensus 19 ~~~~EL~~lL~~PHfqaLl~ahD~Va~~ 46 (50)
T 1y74_B 19 NDAKELKRILTQPHFMALLQTHDVVAHE 46 (50)
T ss_dssp HHHHHHHHHHHSHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence 4667799999999999999999998765
No 9
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=92.82 E-value=0.031 Score=48.26 Aligned_cols=32 Identities=41% Similarity=0.696 Sum_probs=28.0
Q ss_pred ccchHHHHHHHhhhhhhhhhhhHHHHhhcCCC
Q psy14628 3 TFISHDCVEELKKFNVRRRLKGAVLNAISSPK 34 (161)
Q Consensus 3 ~~~~~~tv~~l~~fn~rrklk~~~~~~~~~~~ 34 (161)
.+|++++++.|++||+|||+|+++++++...+
T Consensus 280 ~~~~~~~~~~l~~~~~~~klk~~~~~~~~~~~ 311 (444)
T 3soa_A 280 CMHRQETVDCLKKFNARRKLKGAILTVMLATR 311 (444)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHTTCSCEECCCC
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 46889999999999999999999999885443
No 10
>1vf6_C Maguk P55 subfamily member 5; L27 domain, heterodimer, four-helical bundle, coiled-coil, hydrophobic packing interactions; 2.10A {Mus musculus} SCOP: a.194.1.1
Probab=92.66 E-value=0.1 Score=35.52 Aligned_cols=48 Identities=15% Similarity=0.360 Sum_probs=37.8
Q ss_pred HHHHHHhhhhhhh-hhhhh-cccchHHHHHhhchhhHHHHHHHHhhhccc
Q psy14628 58 AISMILESLDDIE-CLQEQ-LYEDKTMMNSLLEDKQLHILLELYDKISSK 105 (161)
Q Consensus 58 av~qVLdsL~dI~-~l~~a-~~~D~~fL~~ll~d~~L~sLLkvydrL~~~ 105 (161)
-+..++.||..|+ +++|. ..+|..||..+++++.+++-++||.-+...
T Consensus 15 elEel~sSLK~iq~~L~DsQSQeDi~lllqL~~~~DFQ~A~kIhNaVs~~ 64 (72)
T 1vf6_C 15 DVEDLFSSLKHIQHTLVDSQSQEDISLLLQLVQNRDFQNAFKIHNAVTVH 64 (72)
T ss_dssp HHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHHCHHHHHHHHHHHHHC--
T ss_pred CHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 4667777776554 66654 378999999999999999999999998866
No 11
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=91.30 E-value=0.13 Score=42.69 Aligned_cols=29 Identities=48% Similarity=0.761 Sum_probs=25.7
Q ss_pred ccchHHHHHHHhhhhhhhhhhhHHHHhhc
Q psy14628 3 TFISHDCVEELKKFNVRRRLKGAVLNAIS 31 (161)
Q Consensus 3 ~~~~~~tv~~l~~fn~rrklk~~~~~~~~ 31 (161)
..+++++++.|++||+|||+|+++++++.
T Consensus 297 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 325 (362)
T 2bdw_A 297 AIHRQDTVDCLKKFNARRKLKGAILTTMI 325 (362)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35788999999999999999999998763
No 12
>3lra_A Disks large homolog 1, maguk P55 subfamily member protein LIN-7 homolog C; tripartite complex, L27 tetramer, cell junction; 2.95A {Homo sapiens} PDB: 1rso_A
Probab=88.30 E-value=0.27 Score=40.90 Aligned_cols=31 Identities=19% Similarity=0.262 Sum_probs=26.5
Q ss_pred chHHHHHhhchhhHHHHHHHHhhhcccccCC
Q psy14628 79 DKTMMNSLLEDKQLHILLELYDKISSKVISP 109 (161)
Q Consensus 79 D~~fL~~ll~d~~L~sLLkvydrL~~~~~~~ 109 (161)
+..=|..+|..|.+++||.+||.+......|
T Consensus 155 ea~EL~~LLs~PHfQALL~AHD~VAqk~yep 185 (254)
T 3lra_A 155 EIRELLKLLSKPNVKALLSVHDTVAQKNYDL 185 (254)
T ss_dssp HHHHHHHHTTSHHHHHHHHHHHHHHTTCCCH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHhhcCc
Confidence 4555899999999999999999999886554
No 13
>1mxe_E CAM kinase I, target sequence of RAT calmodulin-dependent protein kinase I; calmodulin-pepide complex, XRAY, metal binding protein; 1.70A {Drosophila melanogaster} PDB: 2l7l_B
Probab=72.71 E-value=1.3 Score=23.95 Aligned_cols=17 Identities=24% Similarity=0.190 Sum_probs=13.6
Q ss_pred HhhhhhhhhhhhHHHHh
Q psy14628 13 LKKFNVRRRLKGAVLNA 29 (161)
Q Consensus 13 l~~fn~rrklk~~~~~~ 29 (161)
|++++|+||.|+++.++
T Consensus 1 ~~knfAkrkwk~a~~a~ 17 (26)
T 1mxe_E 1 IKKNFAKSKWKQAFNAT 17 (26)
T ss_dssp CCTTHHHHHHHHHHHHH
T ss_pred ChhhHHHHHHHHHHHHH
Confidence 46788999999998654
No 14
>1zl8_A LIN-7; heterodimer, alpha helix, scaffold, assembly, specifici signaling, protein binding; NMR {Caenorhabditis elegans} SCOP: a.194.1.1
Probab=62.55 E-value=9.7 Score=24.39 Aligned_cols=45 Identities=16% Similarity=0.302 Sum_probs=34.5
Q ss_pred HHHHHHhhhhhhhhhhhhcccchHHHHHhhchhhHHHHHHHHhhh
Q psy14628 58 AISMILESLDDIECLQEQLYEDKTMMNSLLEDKQLHILLELYDKI 102 (161)
Q Consensus 58 av~qVLdsL~dI~~l~~a~~~D~~fL~~ll~d~~L~sLLkvydrL 102 (161)
-|++.++.|+-++...+-+...+.-|+.+|+|.-+.+.=++|+.+
T Consensus 8 Dv~RaiELle~lq~sgevp~~KL~aLq~VLqSdF~~aVREVYEhv 52 (53)
T 1zl8_A 8 DVQRILELMEHVQKTGEVNNAKLASLQQVLQSEFFGAVREVYETV 52 (53)
T ss_dssp HHHHHHHHHHHHGGGSSSTHHHHHHHHHHHSCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 466677777666655554456778899999999999999999875
No 15
>1vf6_A PALS-1, PALS1-associated tight junction protein; L27 domain, heterodimer, four-helical bundle, coiled-coil, hydrophobic packing interactions; 2.10A {Homo sapiens} SCOP: a.194.1.1
Probab=26.71 E-value=65 Score=22.33 Aligned_cols=30 Identities=20% Similarity=0.234 Sum_probs=25.3
Q ss_pred cccchHHHHHhhchhhHHHHHHHHhhhccc
Q psy14628 76 LYEDKTMMNSLLEDKQLHILLELYDKISSK 105 (161)
Q Consensus 76 ~~~D~~fL~~ll~d~~L~sLLkvydrL~~~ 105 (161)
..+++..|+++|++|-++.+|-+..-|...
T Consensus 24 ~~ekLs~lk~~LqSPLF~qILtlQqSikqL 53 (83)
T 1vf6_A 24 QNEKLSMFYETLKSPLFNQILTLQQSIKQL 53 (83)
T ss_dssp THHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred hHhHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 367899999999999999999877766644
Done!