RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy1463
         (947 letters)



>d3b7sa3 d.92.1.13 (A:209-460) Leukotriene A4 hydrolase catalytic
           domain {Human (Homo sapiens) [TaxId: 9606]}
          Length = 252

 Score = 89.3 bits (220), Expect = 2e-20
 Identities = 43/233 (18%), Positives = 76/233 (32%), Gaps = 47/233 (20%)

Query: 420 ENSMLYDEQISTNYHKERIATIVAHELAHQWFGNLVTLAWWNDLWLNEGFASYIEYFGVD 479
           EN  L     +     + ++ ++AH+++H W GNLVT   W+  WLNEG   Y+E     
Sbjct: 63  ENPCLTFVTPTLLAGDKSLSNVIAHQISHSWTGNLVTNKTWDHFWLNEGHTVYLERHICG 122

Query: 480 SVEHTWKIKDIFVVDELQNVFFLDALKSSHPVHVEVSHPDEI--TEIFDKISYSKGSSLL 537
            +          +    +    +     +HP    V    +I     +  + Y KG +LL
Sbjct: 123 RLFGEKFRHFNALGGWGELQNSVKTFGETHPFTKLVVDLTDIDPDVAYSSVPYEKGFALL 182

Query: 538 RMAEHFLTTEVLKLGLQKYIKKKAMGSSTQAELWAFLTNAGHEMRTLPEKMDVLKLGLQK 597
              E  L                                            ++    L+ 
Sbjct: 183 FYLEQLLGGP-----------------------------------------EIFLGFLKA 201

Query: 598 YIKKKAMGSSTQAELWAFLTNAGHEMRTLPENMDVETIMNTWTLQTGFPVIRV 650
           Y++K +  S T  +   FL +   +      ++  +   N W    G P I+ 
Sbjct: 202 YVEKFSYKSITTDDWKDFLYSYFKD----KVDVLNQVDWNAWLYSPGLPPIKP 250



 Score = 67.0 bits (162), Expect = 1e-12
 Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 2/66 (3%)

Query: 865 RVWSREEYINQTAYSLDIGPRLLKYFEKYFDYHYPLEKTDMIAL-PDFGAGAMENFGLIT 923
            VWS +E + ++AY       +LK  E      Y   + D++ L P F  G MEN  L  
Sbjct: 11  LVWSEKEQVEKSAYEFSETESMLKIAEDLG-GPYVWGQYDLLVLPPSFPYGGMENPCLTF 69

Query: 924 FRTAIL 929
               +L
Sbjct: 70  VTPTLL 75


>d3b7sa2 b.98.1.1 (A:1-208) Leukotriene A4 hydrolase N-terminal
           domain {Human (Homo sapiens) [TaxId: 9606]}
          Length = 208

 Score = 77.9 bits (191), Expect = 8e-17
 Identities = 32/171 (18%), Positives = 56/171 (32%), Gaps = 18/171 (10%)

Query: 254 NNFTFLGEVWIHVEVSQ-TTNNITLHMNDLTILERSIKQVDNRSANWESDEGTSLTIGQV 312
              T  G   + V+  +    ++ L   DLTI +  I              G  +     
Sbjct: 30  TRRTLTGTAALTVQSQEDNLRSLVLDTKDLTIEKVVIN-------------GQEVKYALG 76

Query: 313 RNDTINQFMVFELEDEQFWATKRYVLYIKYVGKLNDQMRGLYRSSYEVNNTKR-WIMASQ 371
              +     +           +  V+ I +    + +   L   + E  + K    + SQ
Sbjct: 77  ERQSYKGSPMEISLPIALSKNQEIVIEISFET--SPKSSALQWLTPEQTSGKEHPYLFSQ 134

Query: 372 FQATDARRAFPCFDEPSLKAKFAISIGRLPNMTAISNMPLKDGNQSDPENS 422
            QA   R   PC D PS+K  +   +     + A+ +    DG   DPE+ 
Sbjct: 135 CQAIHCRAILPCQDTPSVKLTYTAEVSVPKELVALMSAIR-DGETPDPEDP 184



 Score = 34.4 bits (78), Expect = 0.040
 Identities = 9/43 (20%), Positives = 15/43 (34%), Gaps = 4/43 (9%)

Query: 810 SKYQNWISNPSKIERTGP----YVWDHFQETVFMSTYLVAMAV 848
            +    +S     E   P         F + V +  YL+A+ V
Sbjct: 164 KELVALMSAIRDGETPDPEDPSRKIYKFIQKVPIPCYLIALVV 206


>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis
           [TaxId: 1423]}
          Length = 234

 Score = 28.8 bits (63), Expect = 2.5
 Identities = 9/82 (10%), Positives = 29/82 (35%), Gaps = 1/82 (1%)

Query: 595 LQKYIKKKAMGSSTQAELWAFLTNAGHEMRTLPENMDVETIMNTWTLQTGFPVIRVARDY 654
           L +      +  S+ +E  A  +      + + +  ++    ++W  + G P  R  +  
Sbjct: 135 LNRLRDPSHVRESSLSEWQAMFSANQLAYQDI-QKWNLPIQYDSWIKRGGTPADREKQII 193

Query: 655 DAGSAVVKQVRGYYRVLYDEKN 676
              +    + R  + +  ++  
Sbjct: 194 THLNHASDEARDTFCITLNQNG 215


>d1jb0b_ f.29.1.1 (B:) Apoprotein a2, PsaB {Synechococcus elongatus
           [TaxId: 32046]}
          Length = 739

 Score = 27.9 bits (62), Expect = 7.6
 Identities = 11/60 (18%), Positives = 22/60 (36%), Gaps = 9/60 (15%)

Query: 810 SKYQNWISNPSKIERTGPYVWD-HF-QETVFMSTYLVAMAVTDFSHRVHNDDHSGSFRVW 867
             ++ W+ +P         +WD  F +        + A      S+ V +  +SG +  W
Sbjct: 71  GNFEQWVQDPVNTRPIAHAIWDPQFGKAA------VDAFTQAGASNPV-DIAYSGVYHWW 123


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.319    0.134    0.402 

Gapped
Lambda     K      H
   0.267   0.0622    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 3,613,560
Number of extensions: 174822
Number of successful extensions: 385
Number of sequences better than 10.0: 1
Number of HSP's gapped: 379
Number of HSP's successfully gapped: 13
Length of query: 947
Length of database: 2,407,596
Length adjustment: 94
Effective length of query: 853
Effective length of database: 1,116,976
Effective search space: 952780528
Effective search space used: 952780528
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.0 bits)