BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14631
(308 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q962X9|BUD31_BRABE Protein BUD31 homolog OS=Branchiostoma belcheri PE=2 SV=1
Length = 144
Score = 195 bits (496), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 106/170 (62%), Positives = 110/170 (64%), Gaps = 57/170 (33%)
Query: 101 AETEPHEGKRKVEALWPIFKIHHQKSEKGEMPKGKYGSTLLVICNFIVSAHQKSRYIYDL 160
AETEPHEGKRKVEALWPIFKIHHQKS RYI+DL
Sbjct: 32 AETEPHEGKRKVEALWPIFKIHHQKS----------------------------RYIFDL 63
Query: 161 FYRRKAISRELYDYCLAENIADKNLIAKWKKQGYELYDYCLAENIADKNLIAKWKKQGYV 220
FYRRKAISRELY+Y CL E IADKNLIAKWKKQGY
Sbjct: 64 FYRRKAISRELYEY-------------------------CLKEGIADKNLIAKWKKQGY- 97
Query: 221 QGYENLCCLRCIQTRDTNFGTSCICRVPKVKLEEGRIVECIHCGCRGCSG 270
ENLCCLRCIQTRDTNFGT+CICRVPK KLEEGRIVEC+HCGCRGCSG
Sbjct: 98 ---ENLCCLRCIQTRDTNFGTNCICRVPKSKLEEGRIVECVHCGCRGCSG 144
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/36 (75%), Positives = 31/36 (86%)
Query: 1 MPKVRRTRKHLPDGWELIEPTLEELEQKMREGRTIP 36
MPKVRR+RK P+GWELIEPTL+EL+QKMRE T P
Sbjct: 1 MPKVRRSRKPPPEGWELIEPTLDELDQKMREAETEP 36
>sp|P12805|BUD31_XENLA Protein BUD31 homolog OS=Xenopus laevis GN=bud31 PE=2 SV=1
Length = 144
Score = 184 bits (467), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 98/170 (57%), Positives = 107/170 (62%), Gaps = 57/170 (33%)
Query: 101 AETEPHEGKRKVEALWPIFKIHHQKSEKGEMPKGKYGSTLLVICNFIVSAHQKSRYIYDL 160
AET+PHEGKRKVE+LWPIF+IHHQK+ RYI+DL
Sbjct: 32 AETDPHEGKRKVESLWPIFRIHHQKT----------------------------RYIFDL 63
Query: 161 FYRRKAISRELYDYCLAENIADKNLIAKWKKQGYELYDYCLAENIADKNLIAKWKKQGYV 220
FY+RKAISRELYD YC+ E ADKNLIAKWKKQGY
Sbjct: 64 FYKRKAISRELYD-------------------------YCIREGYADKNLIAKWKKQGY- 97
Query: 221 QGYENLCCLRCIQTRDTNFGTSCICRVPKVKLEEGRIVECIHCGCRGCSG 270
ENLCCLRCIQTRDTNFGT+CICRVPK KLE GRI+EC HCGCRGCSG
Sbjct: 98 ---ENLCCLRCIQTRDTNFGTNCICRVPKTKLEVGRIIECTHCGCRGCSG 144
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/36 (75%), Positives = 31/36 (86%)
Query: 1 MPKVRRTRKHLPDGWELIEPTLEELEQKMREGRTIP 36
MPKV+R+RK PDGWELIEPTL+EL+QKMRE T P
Sbjct: 1 MPKVKRSRKPPPDGWELIEPTLDELDQKMREAETDP 36
>sp|O70454|BUD31_RAT Protein BUD31 homolog OS=Rattus norvegicus GN=Bud31 PE=2 SV=2
Length = 144
Score = 183 bits (464), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 98/170 (57%), Positives = 107/170 (62%), Gaps = 57/170 (33%)
Query: 101 AETEPHEGKRKVEALWPIFKIHHQKSEKGEMPKGKYGSTLLVICNFIVSAHQKSRYIYDL 160
AETEPHEGKRKVE+LWPIF+IHHQK+ RYI+DL
Sbjct: 32 AETEPHEGKRKVESLWPIFRIHHQKT----------------------------RYIFDL 63
Query: 161 FYRRKAISRELYDYCLAENIADKNLIAKWKKQGYELYDYCLAENIADKNLIAKWKKQGYV 220
FY+RKAISRELY+Y C+ E ADKNLIAKWKKQGY
Sbjct: 64 FYKRKAISRELYEY-------------------------CIKEGYADKNLIAKWKKQGY- 97
Query: 221 QGYENLCCLRCIQTRDTNFGTSCICRVPKVKLEEGRIVECIHCGCRGCSG 270
ENLCCLRCIQTRDTNFGT+CICRVPK KLE GRI+EC HCGCRGCSG
Sbjct: 98 ---ENLCCLRCIQTRDTNFGTNCICRVPKSKLEVGRIIECTHCGCRGCSG 144
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/36 (75%), Positives = 31/36 (86%)
Query: 1 MPKVRRTRKHLPDGWELIEPTLEELEQKMREGRTIP 36
MPKV+R+RK PDGWELIEPTL+EL+QKMRE T P
Sbjct: 1 MPKVKRSRKAPPDGWELIEPTLDELDQKMREAETEP 36
>sp|P41223|BUD31_HUMAN Protein BUD31 homolog OS=Homo sapiens GN=BUD31 PE=1 SV=2
Length = 144
Score = 183 bits (464), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 98/170 (57%), Positives = 107/170 (62%), Gaps = 57/170 (33%)
Query: 101 AETEPHEGKRKVEALWPIFKIHHQKSEKGEMPKGKYGSTLLVICNFIVSAHQKSRYIYDL 160
AETEPHEGKRKVE+LWPIF+IHHQK+ RYI+DL
Sbjct: 32 AETEPHEGKRKVESLWPIFRIHHQKT----------------------------RYIFDL 63
Query: 161 FYRRKAISRELYDYCLAENIADKNLIAKWKKQGYELYDYCLAENIADKNLIAKWKKQGYV 220
FY+RKAISRELY+Y C+ E ADKNLIAKWKKQGY
Sbjct: 64 FYKRKAISRELYEY-------------------------CIKEGYADKNLIAKWKKQGY- 97
Query: 221 QGYENLCCLRCIQTRDTNFGTSCICRVPKVKLEEGRIVECIHCGCRGCSG 270
ENLCCLRCIQTRDTNFGT+CICRVPK KLE GRI+EC HCGCRGCSG
Sbjct: 98 ---ENLCCLRCIQTRDTNFGTNCICRVPKSKLEVGRIIECTHCGCRGCSG 144
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/36 (75%), Positives = 31/36 (86%)
Query: 1 MPKVRRTRKHLPDGWELIEPTLEELEQKMREGRTIP 36
MPKV+R+RK PDGWELIEPTL+EL+QKMRE T P
Sbjct: 1 MPKVKRSRKAPPDGWELIEPTLDELDQKMREAETEP 36
>sp|Q2NKU3|BUD31_BOVIN Protein BUD31 homolog OS=Bos taurus GN=BUD31 PE=2 SV=1
Length = 144
Score = 183 bits (464), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 98/170 (57%), Positives = 107/170 (62%), Gaps = 57/170 (33%)
Query: 101 AETEPHEGKRKVEALWPIFKIHHQKSEKGEMPKGKYGSTLLVICNFIVSAHQKSRYIYDL 160
AETEPHEGKRKVE+LWPIF+IHHQK+ RYI+DL
Sbjct: 32 AETEPHEGKRKVESLWPIFRIHHQKT----------------------------RYIFDL 63
Query: 161 FYRRKAISRELYDYCLAENIADKNLIAKWKKQGYELYDYCLAENIADKNLIAKWKKQGYV 220
FY+RKAISRELY+Y C+ E ADKNLIAKWKKQGY
Sbjct: 64 FYKRKAISRELYEY-------------------------CIKEGYADKNLIAKWKKQGY- 97
Query: 221 QGYENLCCLRCIQTRDTNFGTSCICRVPKVKLEEGRIVECIHCGCRGCSG 270
ENLCCLRCIQTRDTNFGT+CICRVPK KLE GRI+EC HCGCRGCSG
Sbjct: 98 ---ENLCCLRCIQTRDTNFGTNCICRVPKSKLEVGRIIECTHCGCRGCSG 144
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/36 (75%), Positives = 31/36 (86%)
Query: 1 MPKVRRTRKHLPDGWELIEPTLEELEQKMREGRTIP 36
MPKV+R+RK PDGWELIEPTL+EL+QKMRE T P
Sbjct: 1 MPKVKRSRKAPPDGWELIEPTLDELDQKMREAETEP 36
>sp|Q567Z7|BUD31_DANRE Protein BUD31 homolog OS=Danio rerio GN=bud31 PE=2 SV=1
Length = 144
Score = 180 bits (457), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 98/170 (57%), Positives = 108/170 (63%), Gaps = 57/170 (33%)
Query: 101 AETEPHEGKRKVEALWPIFKIHHQKSEKGEMPKGKYGSTLLVICNFIVSAHQKSRYIYDL 160
AETEPHEGKRKVE+LWPIF++HHQ+S RYI+DL
Sbjct: 32 AETEPHEGKRKVESLWPIFRLHHQRS----------------------------RYIFDL 63
Query: 161 FYRRKAISRELYDYCLAENIADKNLIAKWKKQGYELYDYCLAENIADKNLIAKWKKQGYV 220
FY+RKAISRELY YC+ + GY ADKNLIAKWKKQGY
Sbjct: 64 FYKRKAISRELYKYCI--------------RGGY-----------ADKNLIAKWKKQGY- 97
Query: 221 QGYENLCCLRCIQTRDTNFGTSCICRVPKVKLEEGRIVECIHCGCRGCSG 270
ENLCCLRCIQTRDTNFGT+CICRVPK KLE GRI+EC HCGCRGCSG
Sbjct: 98 ---ENLCCLRCIQTRDTNFGTNCICRVPKGKLEVGRIIECTHCGCRGCSG 144
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/36 (72%), Positives = 31/36 (86%)
Query: 1 MPKVRRTRKHLPDGWELIEPTLEELEQKMREGRTIP 36
MPKV+R+RK PDGWEL+EPTL+EL+QKMRE T P
Sbjct: 1 MPKVKRSRKPPPDGWELVEPTLDELDQKMREAETEP 36
>sp|P34313|BUD31_CAEEL Protein BUD31 homolog OS=Caenorhabditis elegans GN=C07A9.2 PE=2
SV=1
Length = 147
Score = 156 bits (394), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/170 (46%), Positives = 97/170 (57%), Gaps = 57/170 (33%)
Query: 101 AETEPHEGKRKVEALWPIFKIHHQKSEKGEMPKGKYGSTLLVICNFIVSAHQKSRYIYDL 160
AETEPHEGKRK E WPIF+IHHQ+S RY+YD+
Sbjct: 35 AETEPHEGKRKTEINWPIFRIHHQRS----------------------------RYVYDM 66
Query: 161 FYRRKAISRELYDYCLAENIADKNLIAKWKKQGYELYDYCLAENIADKNLIAKWKKQGYV 220
+Y++ ISRELY++C L AD LIAKWKKQGY
Sbjct: 67 YYKKAEISRELYEFC-------------------------LTAKFADAALIAKWKKQGY- 100
Query: 221 QGYENLCCLRCIQTRDTNFGTSCICRVPKVKLEEGRIVECIHCGCRGCSG 270
ENLCC++C+ TRD+NFGT+CICRVPK KL+ R++EC+HCGC GCSG
Sbjct: 101 ---ENLCCVKCVNTRDSNFGTACICRVPKSKLDAERVIECVHCGCHGCSG 147
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 16/104 (15%)
Query: 3 KVRRTRKHLPDGWELIEPTLEELEQKMREGRTIPFKENLTELLSEQLF----------VD 52
K+RR RK P+GW+LIEPTLE+ E KMRE T P + ++ +F D
Sbjct: 6 KLRRVRKSPPEGWDLIEPTLEQFEAKMREAETEPHEGKRKTEINWPIFRIHHQRSRYVYD 65
Query: 53 MKFFEITEISYKNHFTKILLFCSQLKLNPMKARERWKQNHFNSV 96
M +++ EIS ++ FC K +WK+ + ++
Sbjct: 66 M-YYKKAEIS-----RELYEFCLTAKFADAALIAKWKKQGYENL 103
>sp|Q65WT0|BD31B_ORYSJ Protein BUD31 homolog 2 OS=Oryza sativa subsp. japonica
GN=Os05g0446300 PE=2 SV=1
Length = 145
Score = 154 bits (389), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 85/171 (49%), Positives = 101/171 (59%), Gaps = 58/171 (33%)
Query: 101 AETEPHEGKRKVEALWPIFKIHHQKSEKGEMPKGKYGSTLLVICNFIVSAHQKSRYIYDL 160
AE +PH+GKRK EALWPIF+I +HQKSRYIYDL
Sbjct: 32 AENDPHDGKRKCEALWPIFRI----------------------------SHQKSRYIYDL 63
Query: 161 FYRRKAISRELYDYCLAENIADKNLIAKWKKQGYELYDYCLAENIADKNLIAKWKKQGYV 220
+YRRK IS+ELY++CL QG+ ADKNLIAKWKK GY
Sbjct: 64 YYRRKEISKELYEFCL--------------DQGH-----------ADKNLIAKWKKPGY- 97
Query: 221 QGYENLCCLRCIQTRDTNFGTSCICRVPKVKLEEGRIVECIHCGCRGCSGG 271
E LCCLRCIQTRD NF T+C+CRVPK L E +++EC+HCGCRGC+ G
Sbjct: 98 ---ERLCCLRCIQTRDHNFATTCVCRVPK-HLREEKVIECVHCGCRGCASG 144
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 26/36 (72%)
Query: 1 MPKVRRTRKHLPDGWELIEPTLEELEQKMREGRTIP 36
MPK++ +R P+GWELIEPTL +LE KMRE P
Sbjct: 1 MPKIKTSRVKYPEGWELIEPTLRDLEAKMREAENDP 36
>sp|Q94DE2|BD31A_ORYSJ Protein BUD31 homolog 1 OS=Oryza sativa subsp. japonica
GN=Os01g0857700 PE=2 SV=1
Length = 145
Score = 150 bits (380), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 83/171 (48%), Positives = 100/171 (58%), Gaps = 58/171 (33%)
Query: 101 AETEPHEGKRKVEALWPIFKIHHQKSEKGEMPKGKYGSTLLVICNFIVSAHQKSRYIYDL 160
AE + H+GKRK EALWPIF+I +HQ+SRYIYDL
Sbjct: 32 AENDTHDGKRKCEALWPIFRI----------------------------SHQRSRYIYDL 63
Query: 161 FYRRKAISRELYDYCLAENIADKNLIAKWKKQGYELYDYCLAENIADKNLIAKWKKQGYV 220
+YRRK IS+ELY++CL QGY AD+NLIAKWKK GY
Sbjct: 64 YYRRKEISKELYEFCL--------------DQGY-----------ADRNLIAKWKKPGY- 97
Query: 221 QGYENLCCLRCIQTRDTNFGTSCICRVPKVKLEEGRIVECIHCGCRGCSGG 271
E LCCLRCIQTRD NF T+C+CRVPK L E +++EC+HCGCRGC+ G
Sbjct: 98 ---ERLCCLRCIQTRDHNFATTCVCRVPK-HLREEKVIECVHCGCRGCASG 144
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 24/32 (75%)
Query: 1 MPKVRRTRKHLPDGWELIEPTLEELEQKMREG 32
MPK++ +R P GWELIEPT+ EL+ KMRE
Sbjct: 1 MPKIKTSRVKYPGGWELIEPTIRELDAKMREA 32
>sp|P35682|BD31C_ORYSJ Protein BUD31 homolog 3 OS=Oryza sativa subsp. japonica
GN=Os12g0149800 PE=2 SV=2
Length = 145
Score = 149 bits (376), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 81/171 (47%), Positives = 101/171 (59%), Gaps = 58/171 (33%)
Query: 101 AETEPHEGKRKVEALWPIFKIHHQKSEKGEMPKGKYGSTLLVICNFIVSAHQKSRYIYDL 160
AE +PH+G+RK EALWPIFKI+HQ+S RY+YDL
Sbjct: 32 AENDPHDGRRKCEALWPIFKINHQRS----------------------------RYLYDL 63
Query: 161 FYRRKAISRELYDYCLAENIADKNLIAKWKKQGYELYDYCLAENIADKNLIAKWKKQGYV 220
+Y RK IS+ELY++CL QG+ AD+NLIAKWKKQGY
Sbjct: 64 YYNRKEISQELYEFCL--------------DQGH-----------ADRNLIAKWKKQGY- 97
Query: 221 QGYENLCCLRCIQTRDTNFGTSCICRVPKVKLEEGRIVECIHCGCRGCSGG 271
E LCCLRCIQTRD NF T+C+CRVPK L E +++EC+HCGC+GC+ G
Sbjct: 98 ---ERLCCLRCIQTRDHNFATTCVCRVPK-HLREEQVIECVHCGCKGCASG 144
Score = 48.5 bits (114), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 24/36 (66%)
Query: 1 MPKVRRTRKHLPDGWELIEPTLEELEQKMREGRTIP 36
MPK++ + PDGWELIEPTL EL KMRE P
Sbjct: 1 MPKIKTSGVKYPDGWELIEPTLSELHSKMREAENDP 36
>sp|Q6PGH1|BUD31_MOUSE Protein BUD31 homolog OS=Mus musculus GN=Bud31 PE=2 SV=1
Length = 103
Score = 132 bits (331), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 62/76 (81%), Positives = 66/76 (86%), Gaps = 4/76 (5%)
Query: 195 ELYDYCLAENIADKNLIAKWKKQGYVQGYENLCCLRCIQTRDTNFGTSCICRVPKVKLEE 254
ELY+YC+ E ADKNLIAKWKKQGY ENLCCLRCIQTRDTNFGT+CICRVPK KLE
Sbjct: 32 ELYEYCIKEGYADKNLIAKWKKQGY----ENLCCLRCIQTRDTNFGTNCICRVPKSKLEV 87
Query: 255 GRIVECIHCGCRGCSG 270
GRI+EC HCGCRGCSG
Sbjct: 88 GRIIECTHCGCRGCSG 103
Score = 58.2 bits (139), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 25/31 (80%), Positives = 29/31 (93%)
Query: 1 MPKVRRTRKHLPDGWELIEPTLEELEQKMRE 31
MPKV+R+RK PDGWELIEPTL+EL+QKMRE
Sbjct: 1 MPKVKRSRKAPPDGWELIEPTLDELDQKMRE 31
>sp|O74772|CWF14_SCHPO Pre-mRNA-splicing factor cwf14 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=cwf14 PE=1 SV=1
Length = 146
Score = 118 bits (295), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 67/160 (41%), Positives = 84/160 (52%), Gaps = 57/160 (35%)
Query: 111 KVEALWPIFKIHHQKSEKGEMPKGKYGSTLLVICNFIVSAHQKSRYIYDLFYRRKAISRE 170
K E L PIF++HHQ+S RYIYDL+Y+R+AIS
Sbjct: 42 KTEMLAPIFQLHHQRS----------------------------RYIYDLYYKREAIS-- 71
Query: 171 LYDYCLAENIADKNLIAKWKKQGYELYDYCLAENIADKNLIAKWKKQGYVQGYENLCCLR 230
ELY++ L +N AD NLIAKWKK GY E LCCLR
Sbjct: 72 -----------------------TELYNWLLKQNYADGNLIAKWKKPGY----EKLCCLR 104
Query: 231 CIQTRDTNFGTSCICRVPKVKLEEGRIVECIHCGCRGCSG 270
CIQT ++ FG++CICRVPK KL++ + V C HCGC GC+
Sbjct: 105 CIQTAESKFGSTCICRVPKSKLDKDQRVRCTHCGCNGCAS 144
Score = 38.5 bits (88), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 1 MPKVRRTR-KHLPDGWELIEPTLEELEQKMREGRTIPFKENLTELLS 46
MP++R +R K PDG++ IEPTL E + +MR+ K TE+L+
Sbjct: 1 MPRLRTSRTKRPPDGFDEIEPTLIEFQDRMRQIENTMGKGTKTEMLA 47
>sp|P25337|BUD31_YEAST Pre-mRNA-splicing factor BUD31 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=BUD31 PE=1 SV=1
Length = 157
Score = 109 bits (273), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/128 (46%), Positives = 76/128 (59%), Gaps = 37/128 (28%)
Query: 151 HQKSRYIYDLFYRRKAISRELYDYCLAENIADKNLIAKWKKQGYELYDYCLAENIADKNL 210
HQ+SRYIY L+Y+RKAIS++LYD+ + E A DK L
Sbjct: 57 HQRSRYIYTLYYKRKAISKDLYDWLIKEKYA-------------------------DKLL 91
Query: 211 IAKWKKQGYVQGYENLCCLRCIQTRDTNFGTSCICRVPKVKLEE-----GRIV---ECIH 262
IAKW+K GY E LCCLRCIQ +TN G++CICRVP+ +LEE G V +C+H
Sbjct: 92 IAKWRKTGY----EKLCCLRCIQKNETNNGSTCICRVPRAQLEEEARKKGTQVSFHQCVH 147
Query: 263 CGCRGCSG 270
CGCRGC+
Sbjct: 148 CGCRGCAS 155
Score = 32.3 bits (72), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 1 MPKVR-RTRKHLPDGWELIEPTLEELEQKMREGRTIPFKENLTELLSEQLFVDMKF 55
MP+++ R K PDG+E I+PTL + E ++R+ + L +EQL+ M+
Sbjct: 1 MPRIKTRRSKPAPDGFEKIKPTLTDFEIQLRDAQKDK-SSKLAAKSNEQLWEIMQL 55
>sp|Q80T14|FRAS1_MOUSE Extracellular matrix protein FRAS1 OS=Mus musculus GN=Fras1 PE=2
SV=2
Length = 4010
Score = 32.0 bits (71), Expect = 6.7, Method: Composition-based stats.
Identities = 13/44 (29%), Positives = 17/44 (38%)
Query: 228 CLRCIQTRDTNFGTSCICRVPKVKLEEGRIVECIHCGCRGCSGG 271
CL+C R G C+ P +E + H CR C G
Sbjct: 826 CLKCQHARHLLLGDHCVPECPPGHYKERGTCKTCHSSCRSCQNG 869
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.138 0.428
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 115,816,345
Number of Sequences: 539616
Number of extensions: 4722855
Number of successful extensions: 11896
Number of sequences better than 100.0: 16
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 11828
Number of HSP's gapped (non-prelim): 45
length of query: 308
length of database: 191,569,459
effective HSP length: 117
effective length of query: 191
effective length of database: 128,434,387
effective search space: 24530967917
effective search space used: 24530967917
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)