BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14634
(388 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|307187750|gb|EFN72722.1| RNA polymerase-associated protein Rtf1 [Camponotus floridanus]
Length = 702
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 128/179 (71%), Positives = 155/179 (86%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EISGVCETGKIY LG TRTNKGLKLRHG ERVFRLEF+SNQEFT+SEF +WK+ C
Sbjct: 398 VAEISGVCETGKIYQLGGTRTNKGLKLRHGAQERVFRLEFVSNQEFTDSEFFKWKETCAV 457
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
+G+++PT DEVE+K K+I ++Y++KEED+E+IVREKERFK TPYNYAMKK QLM+ERD
Sbjct: 458 QGISVPTFDEVEQKLKDINEALLYEYKEEDIEKIVREKERFKQTPYNYAMKKAQLMRERD 517
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIM 307
A +GDDE AS L +++ +LEERA+ELDK RT+TISSISYIN+RNR+KNVEEAEKAIM
Sbjct: 518 AANCRGDDETASRLNQELSELEERASELDKMRTATISSISYINDRNRKKNVEEAEKAIM 576
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 38/53 (71%), Positives = 45/53 (84%)
Query: 333 YIETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
YI TKE+LN+IRLSR KME+ VHLP F ++V GCFVRIGIGNN G P+YRV+E
Sbjct: 348 YISTKEDLNKIRLSRHKMERFVHLPFFDRVVQGCFVRIGIGNNNGKPVYRVAE 400
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/30 (83%), Positives = 27/30 (90%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMA 67
+IVREKERFK TPYNYAMKK QLM+ERD A
Sbjct: 490 KIVREKERFKQTPYNYAMKKAQLMRERDAA 519
>gi|322799130|gb|EFZ20577.1| hypothetical protein SINV_08701 [Solenopsis invicta]
Length = 696
Score = 271 bits (693), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 128/179 (71%), Positives = 155/179 (86%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EISGVCETGKIY LG TRTNKGLKLRHG ERVFRLEF+SNQEFT+SEF +WK+ C
Sbjct: 393 VAEISGVCETGKIYQLGGTRTNKGLKLRHGAQERVFRLEFVSNQEFTDSEFFKWKETCAL 452
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
+G++ PT DEVE+K K+I+ M+Y++KEED+E+IVREKERFK TPYNYAMKK QLM++RD
Sbjct: 453 QGISTPTFDEVEQKLKDIKEAMVYEFKEEDIEKIVREKERFKQTPYNYAMKKAQLMRDRD 512
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIM 307
A +GDDE AS L +++ +LEERA+ELDK RT+TISSISYIN+RNR+KNVEEAEKAIM
Sbjct: 513 AANCRGDDETASRLNQELSELEERASELDKMRTATISSISYINDRNRKKNVEEAEKAIM 571
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Query: 320 RSVKSSASR-KVIEYIETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGI 378
+S+ S+ +R K YI TKE+LN+IRLSR KME+ VHLP F ++V GCFVRIGIGNN G
Sbjct: 329 KSITSNKARPKKPVYISTKEDLNKIRLSRHKMERFVHLPFFDRVVQGCFVRIGIGNNNGK 388
Query: 379 PLYRVSE 385
P+YRV+E
Sbjct: 389 PVYRVAE 395
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/30 (80%), Positives = 27/30 (90%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMA 67
+IVREKERFK TPYNYAMKK QLM++RD A
Sbjct: 485 KIVREKERFKQTPYNYAMKKAQLMRDRDAA 514
>gi|350427275|ref|XP_003494708.1| PREDICTED: RNA polymerase-associated protein Rtf1-like [Bombus
impatiens]
Length = 695
Score = 271 bits (692), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 128/179 (71%), Positives = 156/179 (87%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EISGVCETGKIY LG TRTNKGLKLRHG ERVFRLEF+SNQEFTESEF +WK+ C
Sbjct: 393 VAEISGVCETGKIYQLGGTRTNKGLKLRHGAQERVFRLEFVSNQEFTESEFFKWKETCAL 452
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
+G+++PT +EVE+K K+I+ ++Y++KEED+E+IVREKERFK TPYNYAMKK QLM+ERD
Sbjct: 453 QGISMPTFEEVEQKLKDIKEALVYEFKEEDIEKIVREKERFKQTPYNYAMKKAQLMRERD 512
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIM 307
A +GDDE AS L +++ +LEERA+ELDK RT+TISSISYIN+RNR+KNVEEAEKAIM
Sbjct: 513 AANCRGDDETASRLNQELSELEERASELDKMRTATISSISYINDRNRKKNVEEAEKAIM 571
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/53 (69%), Positives = 45/53 (84%)
Query: 333 YIETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
Y+ TKE+LN+IRLSR KME+ VHLP F ++V GCFVRIGIGNN G P+YRV+E
Sbjct: 343 YVSTKEDLNKIRLSRHKMERFVHLPFFDRVVQGCFVRIGIGNNNGKPVYRVAE 395
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/30 (83%), Positives = 27/30 (90%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMA 67
+IVREKERFK TPYNYAMKK QLM+ERD A
Sbjct: 485 KIVREKERFKQTPYNYAMKKAQLMRERDAA 514
>gi|332016344|gb|EGI57257.1| RNA polymerase-associated protein Rtf1 [Acromyrmex echinatior]
Length = 678
Score = 271 bits (692), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 128/179 (71%), Positives = 155/179 (86%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EISGVCETGKIY LG TRTNKGLKLRHG ERVFRLEF+SNQEFT+SEF +WK+ C
Sbjct: 376 VAEISGVCETGKIYQLGGTRTNKGLKLRHGAQERVFRLEFVSNQEFTDSEFFKWKETCAL 435
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
+G++ PT DEVE+K K+I+ ++Y++KEED+E+IVREKERFK TPYNYAMKK QLM+ERD
Sbjct: 436 QGISTPTFDEVEQKLKDIKEALVYEFKEEDIEKIVREKERFKQTPYNYAMKKAQLMRERD 495
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIM 307
A +GDDE AS L +++ +LEERA+ELDK RT+TISSISYIN+RNR+KNVEEAEKAIM
Sbjct: 496 AANCRGDDETASRLNQELSELEERASELDKMRTATISSISYINDRNRKKNVEEAEKAIM 554
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 53/67 (79%), Gaps = 1/67 (1%)
Query: 320 RSVKSSASR-KVIEYIETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGI 378
+S+ S+ +R K YI TKE+LN+IRLSR KME+ VHLP F ++V GCFVRIGIGNN G
Sbjct: 312 KSITSNKARPKKPVYISTKEDLNKIRLSRHKMERFVHLPFFDRVVQGCFVRIGIGNNNGK 371
Query: 379 PLYRVSE 385
P+YRV+E
Sbjct: 372 PVYRVAE 378
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/30 (83%), Positives = 27/30 (90%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMA 67
+IVREKERFK TPYNYAMKK QLM+ERD A
Sbjct: 468 KIVREKERFKQTPYNYAMKKAQLMRERDAA 497
>gi|383851969|ref|XP_003701503.1| PREDICTED: RNA polymerase-associated protein Rtf1-like [Megachile
rotundata]
Length = 695
Score = 270 bits (691), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 132/200 (66%), Positives = 161/200 (80%), Gaps = 5/200 (2%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EISGVCETGKIY LG TRTNKGLKLRHG ERVFRLEF+SNQEFTESEF +WK+ C
Sbjct: 393 VAEISGVCETGKIYQLGGTRTNKGLKLRHGAQERVFRLEFVSNQEFTESEFFKWKETCAL 452
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
+G+++PT +EVE+K K+I+ ++Y++KEED+E+IVREKERFK TPYNYAMKK QLM+ERD
Sbjct: 453 QGISMPTFEEVEQKLKDIKEALVYEFKEEDIEKIVREKERFKQTPYNYAMKKAQLMRERD 512
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIMV 308
A +GDDE AS L +++ +LEERA+ELDK RT+TISSISYIN+RNR+KNVEEAEKAIM
Sbjct: 513 AANCRGDDETASRLNQELSELEERASELDKMRTATISSISYINDRNRKKNVEEAEKAIME 572
Query: 309 SCCC-----CCSGFSYRSVK 323
F+ RS K
Sbjct: 573 EVKANKGKKVDDPFTRRSTK 592
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/53 (69%), Positives = 45/53 (84%)
Query: 333 YIETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
Y+ TKE+LN+IRLSR KME+ VHLP F ++V GCFVRIGIGNN G P+YRV+E
Sbjct: 343 YVSTKEDLNKIRLSRHKMERFVHLPFFDRVVQGCFVRIGIGNNNGKPVYRVAE 395
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/30 (83%), Positives = 27/30 (90%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMA 67
+IVREKERFK TPYNYAMKK QLM+ERD A
Sbjct: 485 KIVREKERFKQTPYNYAMKKAQLMRERDAA 514
>gi|328789618|ref|XP_001121513.2| PREDICTED: RNA polymerase-associated protein Rtf1 [Apis mellifera]
Length = 695
Score = 270 bits (690), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 128/179 (71%), Positives = 156/179 (87%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EISGVCETGKIY LG TRTNKGLKLRHG ERVFRLEF+SNQEFTESEF +WK+ C
Sbjct: 393 VAEISGVCETGKIYQLGGTRTNKGLKLRHGAQERVFRLEFVSNQEFTESEFFKWKETCAL 452
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
+G+++PT +EVE+K K+I+ ++Y++KEED+E+IVREKERFK TPYNYAMKK QLM+ERD
Sbjct: 453 QGISMPTFEEVEQKLKDIKEALVYEFKEEDIEKIVREKERFKQTPYNYAMKKAQLMRERD 512
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIM 307
A +GDDE AS L +++ +LEERA+ELDK RT+TISSISYIN+RNR+KNVEEAEKAIM
Sbjct: 513 AANCRGDDETASRLNQELSELEERASELDKMRTATISSISYINDRNRKKNVEEAEKAIM 571
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/53 (69%), Positives = 45/53 (84%)
Query: 333 YIETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
Y+ TKE+LN+IRLSR KME+ VHLP F ++V GCFVRIGIGNN G P+YRV+E
Sbjct: 343 YVSTKEDLNKIRLSRHKMERFVHLPFFDRVVQGCFVRIGIGNNNGKPVYRVAE 395
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/30 (83%), Positives = 27/30 (90%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMA 67
+IVREKERFK TPYNYAMKK QLM+ERD A
Sbjct: 485 KIVREKERFKQTPYNYAMKKAQLMRERDAA 514
>gi|380026154|ref|XP_003696824.1| PREDICTED: RNA polymerase-associated protein Rtf1-like [Apis
florea]
Length = 695
Score = 270 bits (690), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 128/179 (71%), Positives = 156/179 (87%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EISGVCETGKIY LG TRTNKGLKLRHG ERVFRLEF+SNQEFTESEF +WK+ C
Sbjct: 393 VAEISGVCETGKIYQLGGTRTNKGLKLRHGAQERVFRLEFVSNQEFTESEFFKWKETCAL 452
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
+G+++PT +EVE+K K+I+ ++Y++KEED+E+IVREKERFK TPYNYAMKK QLM+ERD
Sbjct: 453 QGISMPTFEEVEQKLKDIKEALVYEFKEEDIEKIVREKERFKQTPYNYAMKKAQLMRERD 512
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIM 307
A +GDDE AS L +++ +LEERA+ELDK RT+TISSISYIN+RNR+KNVEEAEKAIM
Sbjct: 513 AANCRGDDETASRLNQELSELEERASELDKMRTATISSISYINDRNRKKNVEEAEKAIM 571
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/53 (69%), Positives = 45/53 (84%)
Query: 333 YIETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
Y+ TKE+LN+IRLSR KME+ VHLP F ++V GCFVRIGIGNN G P+YRV+E
Sbjct: 343 YVSTKEDLNKIRLSRHKMERFVHLPFFDRVVQGCFVRIGIGNNNGKPVYRVAE 395
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/30 (83%), Positives = 27/30 (90%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMA 67
+IVREKERFK TPYNYAMKK QLM+ERD A
Sbjct: 485 KIVREKERFKQTPYNYAMKKAQLMRERDAA 514
>gi|307205224|gb|EFN83614.1| RNA polymerase-associated protein Rtf1 [Harpegnathos saltator]
Length = 694
Score = 269 bits (688), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 126/179 (70%), Positives = 156/179 (87%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EISGVCETGKIY LG TRTNKGLKLRHG ERVFRLEF+SNQEFT+SEF +WK+ C
Sbjct: 392 VAEISGVCETGKIYQLGGTRTNKGLKLRHGAQERVFRLEFVSNQEFTDSEFFKWKETCAL 451
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
+G+++PT DEVE+K K+I+ ++Y++KEED+E+IVREKERFK TPYNYAMKK QLM+ERD
Sbjct: 452 QGISMPTFDEVEQKLKDIKEALVYEFKEEDIEKIVREKERFKQTPYNYAMKKAQLMRERD 511
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIM 307
A +GDDE AS L +++ +LEERA+ELDK RT++ISSISYIN+RNR++NVEEAEKAIM
Sbjct: 512 AANCRGDDETASRLNQELSELEERASELDKMRTASISSISYINDRNRKRNVEEAEKAIM 570
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 38/53 (71%), Positives = 45/53 (84%)
Query: 333 YIETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
YI TKE+LN+IRLSR KME+ VHLP F ++V GCFVRIGIGNN G P+YRV+E
Sbjct: 342 YINTKEDLNKIRLSRHKMERFVHLPFFDRVVQGCFVRIGIGNNNGKPVYRVAE 394
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/30 (83%), Positives = 27/30 (90%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMA 67
+IVREKERFK TPYNYAMKK QLM+ERD A
Sbjct: 484 KIVREKERFKQTPYNYAMKKAQLMRERDAA 513
>gi|345493971|ref|XP_001601558.2| PREDICTED: RNA polymerase-associated protein Rtf1-like [Nasonia
vitripennis]
Length = 657
Score = 257 bits (657), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 121/179 (67%), Positives = 153/179 (85%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EISGVCET KIY LG T+TNKGLKLRHG ERVFRLEF+SNQEFTESEF +WK+ C
Sbjct: 394 VAEISGVCETAKIYQLGNTKTNKGLKLRHGAQERVFRLEFVSNQEFTESEFFKWKETCAL 453
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
+G+++PT +E+++K K+I+ M+Y++KEED+E+IV+EK RFK TPYNYAMKK QLM+ERD
Sbjct: 454 QGISMPTSEEMDQKLKDIKEAMVYEFKEEDIEKIVQEKGRFKGTPYNYAMKKAQLMRERD 513
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIM 307
A +GDDE AS L +I +LEERA++LDK R++TISSISYIN+RNR+KNVEEAEKAI+
Sbjct: 514 AANCRGDDETASRLNIEISELEERASDLDKKRSATISSISYINDRNRKKNVEEAEKAIL 572
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/57 (63%), Positives = 46/57 (80%)
Query: 329 KVIEYIETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
K + Y+ TKE+LN+IRLSR K+E+ VHLP F ++ GCFVRIGIGNN G P+YRV+E
Sbjct: 340 KKVTYVNTKEDLNKIRLSRHKIERFVHLPFFERVAQGCFVRIGIGNNNGRPVYRVAE 396
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/30 (76%), Positives = 26/30 (86%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMA 67
+IV+EK RFK TPYNYAMKK QLM+ERD A
Sbjct: 486 KIVQEKGRFKGTPYNYAMKKAQLMRERDAA 515
>gi|193657299|ref|XP_001943293.1| PREDICTED: hypothetical protein LOC100162144 [Acyrthosiphon pisum]
Length = 636
Score = 245 bits (625), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 146/179 (81%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI VCET K+Y LG TRTNKGL+L+HG +E+VFRLEFISNQEFTESEF++WK+ C
Sbjct: 371 VAEICNVCETAKVYQLGSTRTNKGLRLKHGTNEKVFRLEFISNQEFTESEFVKWKELCHM 430
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
+ LPT E+E K ++I+ + YQ+KEEDVEQIVREKERFK P+NYAMKKT LMK+RD
Sbjct: 431 NRIPLPTLAELEIKVRDIKAALAYQFKEEDVEQIVREKERFKTNPHNYAMKKTSLMKDRD 490
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIM 307
AQ+ G EE +++++ DLEERAN LDK RTSTISSISYIN+RNR++NVEEAEKAI+
Sbjct: 491 DAQALGKVEEVLKIEQQLSDLEERANHLDKMRTSTISSISYINDRNRKRNVEEAEKAIL 549
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 51/67 (76%), Gaps = 2/67 (2%)
Query: 324 SSASRKVIEYIETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRV 383
S + K + YI ++ELN+IRLSRFKMEK VHLP F + VIGCFVRIGIGN G+P+YRV
Sbjct: 312 SDTNEKKVHYITKRDELNKIRLSRFKMEKFVHLPTFEKTVIGCFVRIGIGNYNGVPVYRV 371
Query: 384 SE--NFC 388
+E N C
Sbjct: 372 AEICNVC 378
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/32 (78%), Positives = 28/32 (87%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMAQS 69
QIVREKERFK P+NYAMKKT LMK+RD AQ+
Sbjct: 463 QIVREKERFKTNPHNYAMKKTSLMKDRDDAQA 494
>gi|242008323|ref|XP_002424956.1| RNA polymerase-associated protein RTF1, putative [Pediculus humanus
corporis]
gi|212508570|gb|EEB12218.1| RNA polymerase-associated protein RTF1, putative [Pediculus humanus
corporis]
Length = 674
Score = 244 bits (622), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 157/179 (87%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ E+SGVCETGK+Y LG TRTN GL+LRHG ERVFRLEF+SNQEFTESEF++WK+ C
Sbjct: 369 VAEVSGVCETGKVYQLGSTRTNVGLRLRHGAQERVFRLEFVSNQEFTESEFMKWKETCAL 428
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
+G++LPT D++E+K K+I+ ++Y++KEED+E++V+EKERFK +PYNYAMKKT L+KE+D
Sbjct: 429 QGISLPTFDDLEKKLKDIKEALIYEFKEEDIEKMVKEKERFKSSPYNYAMKKTFLLKEKD 488
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIM 307
MA + GD+E+ + +++KI +LEERA ELDK RTSTISSISYIN+RNR+KNVE+AEKAIM
Sbjct: 489 MAAANGDEEKVAEIKQKIAELEERAEELDKMRTSTISSISYINDRNRKKNVEQAEKAIM 547
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/60 (63%), Positives = 49/60 (81%), Gaps = 2/60 (3%)
Query: 328 RKVIEYIETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNN--TGIPLYRVSE 385
+K IE++ +E+LN+IRLSR KMEK VHLP F ++V GCFVRIGIGNN +G P+YRV+E
Sbjct: 312 QKKIEFVNKREDLNKIRLSRHKMEKFVHLPFFSRVVTGCFVRIGIGNNNGSGKPVYRVAE 371
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 29/32 (90%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMAQS 69
++V+EKERFK +PYNYAMKKT L+KE+DMA +
Sbjct: 461 KMVKEKERFKSSPYNYAMKKTFLLKEKDMAAA 492
>gi|189235165|ref|XP_968097.2| PREDICTED: similar to Rtf1 CG10955-PA [Tribolium castaneum]
Length = 650
Score = 240 bits (613), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 115/200 (57%), Positives = 151/200 (75%), Gaps = 5/200 (2%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ E++ V ET KIY+LG TRTNKGL++RHGN ERVFRLEF+SNQEFTE+E+ +W +
Sbjct: 356 VAEVTNVYETAKIYNLGNTRTNKGLRVRHGNQERVFRLEFVSNQEFTETEYHKWIEASTA 415
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
LPTK+ +E+K +I+ + Y++ E+D+E+I+REKERFKP P+NYAM+KTQLMKERD
Sbjct: 416 ASNPLPTKEHIEQKQADIKEALNYEFNEQDIERIIREKERFKPNPHNYAMRKTQLMKERD 475
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIMV 308
A ++G ++ A L ++I DLEERA+ELDK RTSTISSISYIN+RNR++NVEEAEKAIM
Sbjct: 476 SALARGAEDLARELTQRISDLEERASELDKMRTSTISSISYINDRNRKRNVEEAEKAIMA 535
Query: 309 SCCC-----CCSGFSYRSVK 323
F+ RS K
Sbjct: 536 EVKANKGKKIDDPFTRRSTK 555
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 42/53 (79%)
Query: 333 YIETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
Y+ TK ++N IRLSR K+E+ VH+P F +IV GC+V+IGIG + +P+YRV+E
Sbjct: 306 YVPTKLDMNNIRLSRHKLERFVHMPFFDRIVKGCYVKIGIGQHNNMPVYRVAE 358
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 31/37 (83%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMAQSKIGES 74
+I+REKERFKP P+NYAM+KTQLMKERD A ++ E
Sbjct: 448 RIIREKERFKPNPHNYAMRKTQLMKERDSALARGAED 484
>gi|270003139|gb|EEZ99586.1| hypothetical protein TcasGA2_TC001573 [Tribolium castaneum]
Length = 649
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 115/200 (57%), Positives = 151/200 (75%), Gaps = 5/200 (2%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ E++ V ET KIY+LG TRTNKGL++RHGN ERVFRLEF+SNQEFTE+E+ +W +
Sbjct: 356 VAEVTNVYETAKIYNLGNTRTNKGLRVRHGNQERVFRLEFVSNQEFTETEYHKWIEASTA 415
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
LPTK+ +E+K +I+ + Y++ E+D+E+I+REKERFKP P+NYAM+KTQLMKERD
Sbjct: 416 ASNPLPTKEHIEQKQADIKEALNYEFNEQDIERIIREKERFKPNPHNYAMRKTQLMKERD 475
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIMV 308
A ++G ++ A L ++I DLEERA+ELDK RTSTISSISYIN+RNR++NVEEAEKAIM
Sbjct: 476 SALARGAEDLARELTQRISDLEERASELDKMRTSTISSISYINDRNRKRNVEEAEKAIMA 535
Query: 309 SCCC-----CCSGFSYRSVK 323
F+ RS K
Sbjct: 536 EVKANKGKKIDDPFTRRSTK 555
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 42/53 (79%)
Query: 333 YIETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
Y+ TK ++N IRLSR K+E+ VH+P F +IV GC+V+IGIG + +P+YRV+E
Sbjct: 306 YVPTKLDMNNIRLSRHKLERFVHMPFFDRIVKGCYVKIGIGQHNNMPVYRVAE 358
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/37 (67%), Positives = 31/37 (83%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMAQSKIGES 74
+I+REKERFKP P+NYAM+KTQLMKERD A ++ E
Sbjct: 448 RIIREKERFKPNPHNYAMRKTQLMKERDSALARGAED 484
>gi|427788275|gb|JAA59589.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 699
Score = 231 bits (590), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 110/179 (61%), Positives = 143/179 (79%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ +I+ V ET K+Y+LG+ RTNKGL+L+HG ERVFRLEF+SNQ+FTESEF++WK+
Sbjct: 399 VAQITDVVETAKVYALGRCRTNKGLRLKHGKQERVFRLEFVSNQDFTESEFLKWKEVMAL 458
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
EG + PT +EV RK K+IQ+ + YQ+KE DVE IV EK+RFK P+NYAM+KTQLMK+++
Sbjct: 459 EGASFPTTEEVTRKVKDIQDALNYQYKESDVETIVSEKQRFKRNPHNYAMRKTQLMKQKE 518
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIM 307
MA+ KGD EEA L +++ LEERA ELDK RTSTIS+ISYIN RNR KN+ E E+AI+
Sbjct: 519 MAEQKGDHEEALRLSGELEQLEERARELDKQRTSTISAISYINERNRLKNIVEIERAIL 577
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 40/50 (80%)
Query: 336 TKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
TKEE+ +IRLSR K+E+ VH P F + VIGCFVRIGIG+N G +YRV++
Sbjct: 352 TKEEVGKIRLSRHKLERWVHAPFFAKTVIGCFVRIGIGSNNGRAVYRVAQ 401
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Query: 39 IVREKERFKPTPYNYAMKKTQLMKERDMAQSKIGESQPFR-DGNLSSL 85
IV EK+RFK P+NYAM+KTQLMK+++MA+ K + R G L L
Sbjct: 492 IVSEKQRFKRNPHNYAMRKTQLMKQKEMAEQKGDHEEALRLSGELEQL 539
>gi|427796453|gb|JAA63678.1| hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 669
Score = 231 bits (590), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 110/179 (61%), Positives = 143/179 (79%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ +I+ V ET K+Y+LG+ RTNKGL+L+HG ERVFRLEF+SNQ+FTESEF++WK+
Sbjct: 369 VAQITDVVETAKVYALGRCRTNKGLRLKHGKQERVFRLEFVSNQDFTESEFLKWKEVMAL 428
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
EG + PT +EV RK K+IQ+ + YQ+KE DVE IV EK+RFK P+NYAM+KTQLMK+++
Sbjct: 429 EGASFPTTEEVTRKVKDIQDALNYQYKESDVETIVSEKQRFKRNPHNYAMRKTQLMKQKE 488
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIM 307
MA+ KGD EEA L +++ LEERA ELDK RTSTIS+ISYIN RNR KN+ E E+AI+
Sbjct: 489 MAEQKGDHEEALRLSGELEQLEERARELDKQRTSTISAISYINERNRLKNIVEIERAIL 547
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 40/50 (80%)
Query: 336 TKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
TKEE+ +IRLSR K+E+ VH P F + VIGCFVRIGIG+N G +YRV++
Sbjct: 322 TKEEVGKIRLSRHKLERWVHAPFFAKTVIGCFVRIGIGSNNGRAVYRVAQ 371
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Query: 39 IVREKERFKPTPYNYAMKKTQLMKERDMAQSKIGESQPFR-DGNLSSL 85
IV EK+RFK P+NYAM+KTQLMK+++MA+ K + R G L L
Sbjct: 462 IVSEKQRFKRNPHNYAMRKTQLMKQKEMAEQKGDHEEALRLSGELEQL 509
>gi|427779851|gb|JAA55377.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 684
Score = 231 bits (590), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 110/179 (61%), Positives = 143/179 (79%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ +I+ V ET K+Y+LG+ RTNKGL+L+HG ERVFRLEF+SNQ+FTESEF++WK+
Sbjct: 384 VAQITDVVETAKVYALGRCRTNKGLRLKHGKQERVFRLEFVSNQDFTESEFLKWKEVMAL 443
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
EG + PT +EV RK K+IQ+ + YQ+KE DVE IV EK+RFK P+NYAM+KTQLMK+++
Sbjct: 444 EGASFPTTEEVTRKVKDIQDALNYQYKESDVETIVSEKQRFKRNPHNYAMRKTQLMKQKE 503
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIM 307
MA+ KGD EEA L +++ LEERA ELDK RTSTIS+ISYIN RNR KN+ E E+AI+
Sbjct: 504 MAEQKGDHEEALRLSGELEQLEERARELDKQRTSTISAISYINERNRLKNIVEIERAIL 562
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 40/50 (80%)
Query: 336 TKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
TKEE+ +IRLSR K+E+ VH P F + VIGCFVRIGIG+N G +YRV++
Sbjct: 337 TKEEVGKIRLSRHKLERWVHAPFFAKTVIGCFVRIGIGSNNGRAVYRVAQ 386
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Query: 39 IVREKERFKPTPYNYAMKKTQLMKERDMAQSKIGESQPFR-DGNLSSL 85
IV EK+RFK P+NYAM+KTQLMK+++MA+ K + R G L L
Sbjct: 477 IVSEKQRFKRNPHNYAMRKTQLMKQKEMAEQKGDHEEALRLSGELEQL 524
>gi|427796683|gb|JAA63793.1| hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 670
Score = 231 bits (589), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 110/179 (61%), Positives = 143/179 (79%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ +I+ V ET K+Y+LG+ RTNKGL+L+HG ERVFRLEF+SNQ+FTESEF++WK+
Sbjct: 370 VAQITDVVETAKVYALGRCRTNKGLRLKHGKQERVFRLEFVSNQDFTESEFLKWKEVMAL 429
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
EG + PT +EV RK K+IQ+ + YQ+KE DVE IV EK+RFK P+NYAM+KTQLMK+++
Sbjct: 430 EGASFPTTEEVTRKVKDIQDALNYQYKESDVETIVSEKQRFKRNPHNYAMRKTQLMKQKE 489
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIM 307
MA+ KGD EEA L +++ LEERA ELDK RTSTIS+ISYIN RNR KN+ E E+AI+
Sbjct: 490 MAEQKGDHEEALRLSGELEQLEERARELDKQRTSTISAISYINERNRLKNIVEIERAIL 548
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 40/50 (80%)
Query: 336 TKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
TKEE+ +IRLSR K+E+ VH P F + VIGCFVRIGIG+N G +YRV++
Sbjct: 323 TKEEVGKIRLSRHKLERWVHAPFFAKTVIGCFVRIGIGSNNGRAVYRVAQ 372
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Query: 39 IVREKERFKPTPYNYAMKKTQLMKERDMAQSKIGESQPFR-DGNLSSL 85
IV EK+RFK P+NYAM+KTQLMK+++MA+ K + R G L L
Sbjct: 463 IVSEKQRFKRNPHNYAMRKTQLMKQKEMAEQKGDHEEALRLSGELEQL 510
>gi|52346042|ref|NP_001005068.1| Rtf1, Paf1/RNA polymerase II complex component, homolog [Xenopus
(Silurana) tropicalis]
gi|49899962|gb|AAH76973.1| MGC89486 protein [Xenopus (Silurana) tropicalis]
Length = 590
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 103/180 (57%), Positives = 140/180 (77%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI+GV ETGK+Y LG TRTNKGL+LRHGN +RVFRLEF+SNQEFTESEF++WK+ +
Sbjct: 282 VAEITGVVETGKVYQLGGTRTNKGLQLRHGNDQRVFRLEFVSNQEFTESEFMKWKEAMFS 341
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
G+ LPT DE+ +K I+ M Y++ ++D+E+IV+EKERF+ P NYAMKKTQLMK++
Sbjct: 342 AGMQLPTLDEINKKELSIKEAMNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLMKDKA 401
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIMV 308
MA+ GD + A +Q ++++LEERA LD+ RT IS+ISYIN RNR N+ E+EKA++
Sbjct: 402 MAEEAGDQDRAKQIQDELNELEERAEALDRQRTKNISAISYINQRNREWNIVESEKALVA 461
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 38/48 (79%)
Query: 338 EELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
EELN++RLSR K+E+ H+P F + V GCFVRIGIGN+ P+YRV+E
Sbjct: 237 EELNKVRLSRHKLERWCHMPFFAKTVSGCFVRIGIGNHNSKPVYRVAE 284
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMAQ 68
+IV+EKERF+ P NYAMKKTQLMK++ MA+
Sbjct: 374 EIVKEKERFRKAPPNYAMKKTQLMKDKAMAE 404
>gi|119612897|gb|EAW92491.1| Rtf1, Paf1/RNA polymerase II complex component, homolog (S.
cerevisiae), isoform CRA_b [Homo sapiens]
Length = 412
Score = 221 bits (564), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 102/181 (56%), Positives = 142/181 (78%)
Query: 128 EIGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCM 187
++ EI+GV ET K+Y LG TRTNKGL+LRHGN +RVFRLEF+SNQEFTESEF++WK+
Sbjct: 225 QVAEITGVVETAKVYQLGGTRTNKGLQLRHGNDQRVFRLEFVSNQEFTESEFMKWKEAMF 284
Query: 188 TEGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKER 247
+ G+ LPT DE+ +K I+ + Y++ ++D+E+IV+EKERF+ P NYAMKKTQL+KE+
Sbjct: 285 SAGMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEK 344
Query: 248 DMAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIM 307
MA+ GD ++A +Q ++++LEERA LD+ RT IS+ISYIN RNR N+ E+EKA++
Sbjct: 345 AMAEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAISYINQRNREWNIVESEKALV 404
Query: 308 V 308
V
Sbjct: 405 V 405
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 27/32 (84%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMAQS 69
+IV+EKERF+ P NYAMKKTQL+KE+ MA+
Sbjct: 318 EIVKEKERFRKAPPNYAMKKTQLLKEKAMAED 349
>gi|344241159|gb|EGV97262.1| RNA polymerase-associated protein RTF1-like [Cricetulus griseus]
Length = 585
Score = 221 bits (562), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 101/180 (56%), Positives = 141/180 (78%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI+GV ET K+Y LG TRTNKGL+LRHGN +RVFRLEF+SNQEFTESEF++WK+ +
Sbjct: 277 VAEITGVVETAKVYQLGGTRTNKGLQLRHGNDQRVFRLEFVSNQEFTESEFMKWKEAMFS 336
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
G+ LPT DE+ +K I++ + Y++ ++D+E+IV+EKERF+ P NYAMKKTQL+KE+
Sbjct: 337 AGMQLPTLDEINKKELSIKDALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKA 396
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIMV 308
MA+ GD ++A +Q ++++LEERA LD+ RT IS+ISYIN RNR N+ E+EKA++
Sbjct: 397 MAEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAISYINQRNREWNIVESEKALVA 456
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 38/48 (79%)
Query: 338 EELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
EELNR+RLSR K+E+ H+P F + V GCFVRIGIGN+ P+YRV+E
Sbjct: 232 EELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAE 279
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMAQ 68
+IV+EKERF+ P NYAMKKTQL+KE+ MA+
Sbjct: 369 EIVKEKERFRKAPPNYAMKKTQLLKEKAMAE 399
>gi|380799507|gb|AFE71629.1| RNA polymerase-associated protein RTF1 homolog, partial [Macaca
mulatta]
gi|380799509|gb|AFE71630.1| RNA polymerase-associated protein RTF1 homolog, partial [Macaca
mulatta]
gi|380799511|gb|AFE71631.1| RNA polymerase-associated protein RTF1 homolog, partial [Macaca
mulatta]
gi|380799513|gb|AFE71632.1| RNA polymerase-associated protein RTF1 homolog, partial [Macaca
mulatta]
Length = 479
Score = 220 bits (561), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 101/180 (56%), Positives = 140/180 (77%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI+GV ET K+Y LG TRTNKGL+LRHGN +RVFRLEF+SNQEFTESEF++WK+ +
Sbjct: 171 VAEITGVVETAKVYQLGGTRTNKGLQLRHGNDQRVFRLEFVSNQEFTESEFMKWKEAMFS 230
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
G+ LPT DE+ +K I+ + Y++ ++D+E+IV+EKERF+ P NYAMKKTQL+KE+
Sbjct: 231 AGMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKA 290
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIMV 308
MA+ GD ++A +Q ++++LEERA LD+ RT IS+ISYIN RNR N+ E+EKA++
Sbjct: 291 MAEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAISYINQRNREWNIVESEKALVA 350
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 38/48 (79%)
Query: 338 EELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
EELNR+RLSR K+E+ H+P F + V GCFVRIGIGN+ P+YRV+E
Sbjct: 126 EELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAE 173
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMAQ 68
+IV+EKERF+ P NYAMKKTQL+KE+ MA+
Sbjct: 263 EIVKEKERFRKAPPNYAMKKTQLLKEKAMAE 293
>gi|355717490|gb|AES05953.1| Rtf1, Paf1/RNA polymerase II complex component,-like protein
[Mustela putorius furo]
Length = 420
Score = 220 bits (561), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 101/180 (56%), Positives = 140/180 (77%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI+GV ET K+Y LG TRTNKGL+LRHGN +RVFRLEF+SNQEFTESEF++WK+ +
Sbjct: 113 VAEITGVVETAKVYQLGGTRTNKGLQLRHGNDQRVFRLEFVSNQEFTESEFMKWKEAMFS 172
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
G+ LPT DE+ +K I+ + Y++ ++D+E+IV+EKERF+ P NYAMKKTQL+KE+
Sbjct: 173 AGMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKA 232
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIMV 308
MA+ GD ++A +Q ++++LEERA LD+ RT IS+ISYIN RNR N+ E+EKA++
Sbjct: 233 MAEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAISYINQRNREWNIVESEKALVA 292
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 38/48 (79%)
Query: 338 EELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
EELNR+RLSR K+E+ H+P F + V GCFVRIGIGN+ P+YRV+E
Sbjct: 68 EELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAE 115
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMAQ 68
+IV+EKERF+ P NYAMKKTQL+KE+ MA+
Sbjct: 205 EIVKEKERFRKAPPNYAMKKTQLLKEKAMAE 235
>gi|354471823|ref|XP_003498140.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog
[Cricetulus griseus]
Length = 709
Score = 220 bits (561), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 101/180 (56%), Positives = 141/180 (78%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI+GV ET K+Y LG TRTNKGL+LRHGN +RVFRLEF+SNQEFTESEF++WK+ +
Sbjct: 401 VAEITGVVETAKVYQLGGTRTNKGLQLRHGNDQRVFRLEFVSNQEFTESEFMKWKEAMFS 460
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
G+ LPT DE+ +K I++ + Y++ ++D+E+IV+EKERF+ P NYAMKKTQL+KE+
Sbjct: 461 AGMQLPTLDEINKKELSIKDALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKA 520
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIMV 308
MA+ GD ++A +Q ++++LEERA LD+ RT IS+ISYIN RNR N+ E+EKA++
Sbjct: 521 MAEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAISYINQRNREWNIVESEKALVA 580
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 38/48 (79%)
Query: 338 EELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
EELNR+RLSR K+E+ H+P F + V GCFVRIGIGN+ P+YRV+E
Sbjct: 356 EELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAE 403
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMAQ 68
+IV+EKERF+ P NYAMKKTQL+KE+ MA+
Sbjct: 493 EIVKEKERFRKAPPNYAMKKTQLLKEKAMAE 523
>gi|119612896|gb|EAW92490.1| Rtf1, Paf1/RNA polymerase II complex component, homolog (S.
cerevisiae), isoform CRA_a [Homo sapiens]
Length = 429
Score = 220 bits (561), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 101/180 (56%), Positives = 140/180 (77%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI+GV ET K+Y LG TRTNKGL+LRHGN +RVFRLEF+SNQEFTESEF++WK+ +
Sbjct: 121 VAEITGVVETAKVYQLGGTRTNKGLQLRHGNDQRVFRLEFVSNQEFTESEFMKWKEAMFS 180
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
G+ LPT DE+ +K I+ + Y++ ++D+E+IV+EKERF+ P NYAMKKTQL+KE+
Sbjct: 181 AGMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKA 240
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIMV 308
MA+ GD ++A +Q ++++LEERA LD+ RT IS+ISYIN RNR N+ E+EKA++
Sbjct: 241 MAEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAISYINQRNREWNIVESEKALVA 300
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 38/48 (79%)
Query: 338 EELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
EELNR+RLSR K+E+ H+P F + V GCFVRIGIGN+ P+YRV+E
Sbjct: 76 EELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAE 123
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMAQ 68
+IV+EKERF+ P NYAMKKTQL+KE+ MA+
Sbjct: 213 EIVKEKERFRKAPPNYAMKKTQLLKEKAMAE 243
>gi|291236308|ref|XP_002738082.1| PREDICTED: Rtf1, Paf1/RNA polymerase II complex component, homolog
(S. cerevisiae)-like, partial [Saccoglossus kowalevskii]
Length = 633
Score = 220 bits (561), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 102/178 (57%), Positives = 139/178 (78%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI+ V ET KIY LG T+TNKGL+LRHG ERVFRLEF+SNQEF+E EF +WK++ M
Sbjct: 346 VAEITDVVETAKIYQLGSTKTNKGLRLRHGTQERVFRLEFVSNQEFSEHEFFKWKEELML 405
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
G+ LPTK+E+E K +EIQ+ + Y + E+DV+++V+EK++F+ P NYAMKKT LMK RD
Sbjct: 406 NGLQLPTKEEIEDKYREIQSALKYNFNEDDVDKMVQEKKKFRKNPRNYAMKKTDLMKRRD 465
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAI 306
A +GD E+ + ++++DLEERA ELDK RT IS+ISYIN RNR+KN+++AE A+
Sbjct: 466 EADQQGDVEQVKMYAKELEDLEERAEELDKQRTKNISAISYINQRNRQKNIKDAEIAM 523
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 41/52 (78%)
Query: 334 IETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
+ +K++L R++LSR K+E+ VH+P F +V GCFVRIGIG N G P+YRV+E
Sbjct: 297 VNSKDDLLRVKLSRHKLERWVHMPFFTTVVKGCFVRIGIGTNDGRPVYRVAE 348
Score = 41.6 bits (96), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMA 67
++V+EK++F+ P NYAMKKT LMK RD A
Sbjct: 438 KMVQEKKKFRKNPRNYAMKKTDLMKRRDEA 467
>gi|74187158|dbj|BAE22595.1| unnamed protein product [Mus musculus]
Length = 391
Score = 220 bits (560), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 101/180 (56%), Positives = 140/180 (77%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI+GV ET K+Y LG TRTNKGL+LRHGN +RVFRLEF+SNQEFTESEF++WK+ +
Sbjct: 96 VAEITGVVETAKVYQLGGTRTNKGLQLRHGNDQRVFRLEFVSNQEFTESEFMKWKEAMFS 155
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
G+ LPT DE+ +K I+ + Y++ ++D+E+IV+EKERF+ P NYAMKKTQL+KE+
Sbjct: 156 AGMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKA 215
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIMV 308
MA+ GD ++A +Q ++++LEERA LD+ RT IS+ISYIN RNR N+ E+EKA++
Sbjct: 216 MAEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAISYINQRNREWNIVESEKALVA 275
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 39/52 (75%)
Query: 334 IETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
+ EELNR+RLSR K+E+ H+P F + V GCFVRIGIGN+ P+YRV+E
Sbjct: 47 VSLPEELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAE 98
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMAQ 68
+IV+EKERF+ P NYAMKKTQL+KE+ MA+
Sbjct: 188 EIVKEKERFRKAPPNYAMKKTQLLKEKAMAE 218
>gi|149692456|ref|XP_001500906.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Equus
caballus]
Length = 696
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 101/180 (56%), Positives = 140/180 (77%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI+GV ET K+Y LG TRTNKGL+LRHGN +RVFRLEF+SNQEFTESEF++WK+ +
Sbjct: 388 VAEITGVVETAKVYQLGGTRTNKGLQLRHGNDQRVFRLEFVSNQEFTESEFMKWKEAMFS 447
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
G+ LPT DE+ +K I+ + Y++ ++D+E+IV+EKERF+ P NYAMKKTQL+KE+
Sbjct: 448 AGMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKA 507
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIMV 308
MA+ GD ++A +Q ++++LEERA LD+ RT IS+ISYIN RNR N+ E+EKA++
Sbjct: 508 MAEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAISYINQRNREWNIVESEKALVA 567
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 38/48 (79%)
Query: 338 EELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
EELNR+RLSR K+E+ H+P F + V GCFVRIGIGN+ P+YRV+E
Sbjct: 343 EELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAE 390
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMAQ 68
+IV+EKERF+ P NYAMKKTQL+KE+ MA+
Sbjct: 480 EIVKEKERFRKAPPNYAMKKTQLLKEKAMAE 510
>gi|157822517|ref|NP_001102428.1| RNA polymerase-associated protein RTF1 homolog [Rattus norvegicus]
gi|149023028|gb|EDL79922.1| Rtf1, Paf1/RNA polymerase II complex component, homolog (S.
cerevisiae) (predicted) [Rattus norvegicus]
Length = 429
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 101/180 (56%), Positives = 140/180 (77%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI+GV ET K+Y LG TRTNKGL+LRHGN +RVFRLEF+SNQEFTESEF++WK+ +
Sbjct: 121 VAEITGVVETAKVYQLGGTRTNKGLQLRHGNDQRVFRLEFVSNQEFTESEFMKWKEAMFS 180
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
G+ LPT DE+ +K I+ + Y++ ++D+E+IV+EKERF+ P NYAMKKTQL+KE+
Sbjct: 181 AGMQLPTLDEINKKEFSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKA 240
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIMV 308
MA+ GD ++A +Q ++++LEERA LD+ RT IS+ISYIN RNR N+ E+EKA++
Sbjct: 241 MAEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAISYINQRNREWNIVESEKALVA 300
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 38/48 (79%)
Query: 338 EELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
EELNR+RLSR K+E+ H+P F + V GCFVRIGIGN+ P+YRV+E
Sbjct: 76 EELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAE 123
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMAQ 68
+IV+EKERF+ P NYAMKKTQL+KE+ MA+
Sbjct: 213 EIVKEKERFRKAPPNYAMKKTQLLKEKAMAE 243
>gi|355692628|gb|EHH27231.1| hypothetical protein EGK_17386 [Macaca mulatta]
gi|355777961|gb|EHH62997.1| hypothetical protein EGM_15879 [Macaca fascicularis]
Length = 588
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 101/180 (56%), Positives = 140/180 (77%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI+GV ET K+Y LG TRTNKGL+LRHGN +RVFRLEF+SNQEFTESEF++WK+ +
Sbjct: 277 VAEITGVVETAKVYQLGGTRTNKGLQLRHGNDQRVFRLEFVSNQEFTESEFMKWKEAMFS 336
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
G+ LPT DE+ +K I+ + Y++ ++D+E+IV+EKERF+ P NYAMKKTQL+KE+
Sbjct: 337 AGMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKA 396
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIMV 308
MA+ GD ++A +Q ++++LEERA LD+ RT IS+ISYIN RNR N+ E+EKA++
Sbjct: 397 MAEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAISYINQRNREWNIVESEKALVA 456
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 38/48 (79%)
Query: 338 EELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
EELNR+RLSR K+E+ H+P F + V GCFVRIGIGN+ P+YRV+E
Sbjct: 232 EELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAE 279
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMAQ 68
+IV+EKERF+ P NYAMKKTQL+KE+ MA+
Sbjct: 369 EIVKEKERFRKAPPNYAMKKTQLLKEKAMAE 399
>gi|410961475|ref|XP_003987308.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Felis
catus]
Length = 585
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 101/180 (56%), Positives = 140/180 (77%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI+GV ET K+Y LG TRTNKGL+LRHGN +RVFRLEF+SNQEFTESEF++WK+ +
Sbjct: 277 VAEITGVVETAKVYQLGGTRTNKGLQLRHGNDQRVFRLEFVSNQEFTESEFMKWKEAMFS 336
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
G+ LPT DE+ +K I+ + Y++ ++D+E+IV+EKERF+ P NYAMKKTQL+KE+
Sbjct: 337 AGMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKA 396
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIMV 308
MA+ GD ++A +Q ++++LEERA LD+ RT IS+ISYIN RNR N+ E+EKA++
Sbjct: 397 MAEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAISYINQRNREWNIVESEKALVA 456
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 38/48 (79%)
Query: 338 EELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
EELNR+RLSR K+E+ H+P F + V GCFVRIGIGN+ P+YRV+E
Sbjct: 232 EELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAE 279
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMAQ 68
+IV+EKERF+ P NYAMKKTQL+KE+ MA+
Sbjct: 369 EIVKEKERFRKAPPNYAMKKTQLLKEKAMAE 399
>gi|115529001|gb|AAI17849.1| Rtf1 protein [Mus musculus]
gi|115529003|gb|AAI17850.1| Rtf1 protein [Mus musculus]
Length = 585
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 101/180 (56%), Positives = 140/180 (77%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI+GV ET K+Y LG TRTNKGL+LRHGN +RVFRLEF+SNQEFTESEF++WK+ +
Sbjct: 277 VAEITGVVETAKVYQLGGTRTNKGLQLRHGNDQRVFRLEFVSNQEFTESEFMKWKEAMFS 336
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
G+ LPT DE+ +K I+ + Y++ ++D+E+IV+EKERF+ P NYAMKKTQL+KE+
Sbjct: 337 AGMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKA 396
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIMV 308
MA+ GD ++A +Q ++++LEERA LD+ RT IS+ISYIN RNR N+ E+EKA++
Sbjct: 397 MAEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAISYINQRNREWNIVESEKALVA 456
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 38/48 (79%)
Query: 338 EELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
EELNR+RLSR K+E+ H+P F + V GCFVRIGIGN+ P+YRV+E
Sbjct: 232 EELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAE 279
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMAQ 68
+IV+EKERF+ P NYAMKKTQL+KE+ MA+
Sbjct: 369 EIVKEKERFRKAPPNYAMKKTQLLKEKAMAE 399
>gi|431896102|gb|ELK05520.1| RNA polymerase-associated protein RTF1 like protein [Pteropus
alecto]
Length = 656
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 101/180 (56%), Positives = 140/180 (77%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI+GV ET K+Y LG TRTNKGL+LRHGN +RVFRLEF+SNQEFTESEF++WK+ +
Sbjct: 348 VAEITGVVETAKVYQLGGTRTNKGLQLRHGNDQRVFRLEFVSNQEFTESEFMKWKEAMFS 407
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
G+ LPT DE+ +K I+ + Y++ ++D+E+IV+EKERF+ P NYAMKKTQL+KE+
Sbjct: 408 AGMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKA 467
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIMV 308
MA+ GD ++A +Q ++++LEERA LD+ RT IS+ISYIN RNR N+ E+EKA++
Sbjct: 468 MAEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAISYINQRNREWNIVESEKALVA 527
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 39/48 (81%)
Query: 338 EELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
EELNR+RLSR+K+E+ H+P F + V GCFVRIGIGN+ P+YRV+E
Sbjct: 303 EELNRVRLSRYKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAE 350
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMAQ 68
+IV+EKERF+ P NYAMKKTQL+KE+ MA+
Sbjct: 440 EIVKEKERFRKAPPNYAMKKTQLLKEKAMAE 470
>gi|15929205|gb|AAH15052.1| Rtf1, Paf1/RNA polymerase II complex component, homolog (S.
cerevisiae) [Homo sapiens]
gi|158258036|dbj|BAF84991.1| unnamed protein product [Homo sapiens]
Length = 585
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 101/180 (56%), Positives = 140/180 (77%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI+GV ET K+Y LG TRTNKGL+LRHGN +RVFRLEF+SNQEFTESEF++WK+ +
Sbjct: 277 VAEITGVVETAKVYQLGGTRTNKGLQLRHGNDQRVFRLEFVSNQEFTESEFMKWKEAMFS 336
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
G+ LPT DE+ +K I+ + Y++ ++D+E+IV+EKERF+ P NYAMKKTQL+KE+
Sbjct: 337 AGMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKA 396
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIMV 308
MA+ GD ++A +Q ++++LEERA LD+ RT IS+ISYIN RNR N+ E+EKA++
Sbjct: 397 MAEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAISYINQRNREWNIVESEKALVA 456
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 38/48 (79%)
Query: 338 EELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
EELNR+RLSR K+E+ H+P F + V GCFVRIGIGN+ P+YRV+E
Sbjct: 232 EELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAE 279
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMAQ 68
+IV+EKERF+ P NYAMKKTQL+KE+ MA+
Sbjct: 369 EIVKEKERFRKAPPNYAMKKTQLLKEKAMAE 399
>gi|387018404|gb|AFJ51320.1| RNA polymerase-associated protein RTF1-like protein [Crotalus
adamanteus]
Length = 671
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 101/180 (56%), Positives = 139/180 (77%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI+GV ET K+Y LG TRTNKGL+LRHGN +RVFRLEF+SNQEFTESEF++WK+ +
Sbjct: 363 VAEITGVVETAKVYQLGATRTNKGLQLRHGNDQRVFRLEFVSNQEFTESEFMKWKEAMFS 422
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
G+ LPT DE+ +K I+ + Y++ ++D+E+IV+EKERF+ P NYAMKKTQL+KE+
Sbjct: 423 AGMQLPTLDEINKKEVSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKA 482
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIMV 308
MA+ GD + A +Q ++++LEERA LD+ RT IS+ISYIN RNR N+ E+EKA++
Sbjct: 483 MAEDLGDQDRAKQIQDQLNELEERAEALDRQRTKNISAISYINQRNREWNIVESEKALVA 542
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 38/48 (79%)
Query: 338 EELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
EELNR+RLSR K+E+ H+P F + V GCFVRIGIGN+ P+YRV+E
Sbjct: 318 EELNRVRLSRHKLERWCHMPFFAKTVAGCFVRIGIGNHNSKPVYRVAE 365
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMAQ 68
+IV+EKERF+ P NYAMKKTQL+KE+ MA+
Sbjct: 455 EIVKEKERFRKAPPNYAMKKTQLLKEKAMAE 485
>gi|20521862|dbj|BAA13382.2| KIAA0252 [Homo sapiens]
Length = 702
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 101/180 (56%), Positives = 140/180 (77%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI+GV ET K+Y LG TRTNKGL+LRHGN +RVFRLEF+SNQEFTESEF++WK+ +
Sbjct: 394 VAEITGVVETAKVYQLGGTRTNKGLQLRHGNDQRVFRLEFVSNQEFTESEFMKWKEAMFS 453
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
G+ LPT DE+ +K I+ + Y++ ++D+E+IV+EKERF+ P NYAMKKTQL+KE+
Sbjct: 454 AGMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKA 513
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIMV 308
MA+ GD ++A +Q ++++LEERA LD+ RT IS+ISYIN RNR N+ E+EKA++
Sbjct: 514 MAEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAISYINQRNREWNIVESEKALVA 573
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 38/48 (79%)
Query: 338 EELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
EELNR+RLSR K+E+ H+P F + V GCFVRIGIGN+ P+YRV+E
Sbjct: 349 EELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAE 396
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMAQ 68
+IV+EKERF+ P NYAMKKTQL+KE+ MA+
Sbjct: 486 EIVKEKERFRKAPPNYAMKKTQLLKEKAMAE 516
>gi|301754857|ref|XP_002913302.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog
[Ailuropoda melanoleuca]
Length = 814
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 101/180 (56%), Positives = 140/180 (77%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI+GV ET K+Y LG TRTNKGL+LRHGN +RVFRLEF+SNQEFTESEF++WK+ +
Sbjct: 506 VAEITGVVETAKVYQLGGTRTNKGLQLRHGNDQRVFRLEFVSNQEFTESEFMKWKEAMFS 565
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
G+ LPT DE+ +K I+ + Y++ ++D+E+IV+EKERF+ P NYAMKKTQL+KE+
Sbjct: 566 AGMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKA 625
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIMV 308
MA+ GD ++A +Q ++++LEERA LD+ RT IS+ISYIN RNR N+ E+EKA++
Sbjct: 626 MAEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAISYINQRNREWNIVESEKALVA 685
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 38/48 (79%)
Query: 338 EELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
EELNR+RLSR K+E+ H+P F + V GCFVRIGIGN+ P+YRV+E
Sbjct: 461 EELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAE 508
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMAQ 68
+IV+EKERF+ P NYAMKKTQL+KE+ MA+
Sbjct: 598 EIVKEKERFRKAPPNYAMKKTQLLKEKAMAE 628
>gi|281338210|gb|EFB13794.1| hypothetical protein PANDA_001051 [Ailuropoda melanoleuca]
Length = 695
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 101/180 (56%), Positives = 140/180 (77%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI+GV ET K+Y LG TRTNKGL+LRHGN +RVFRLEF+SNQEFTESEF++WK+ +
Sbjct: 379 VAEITGVVETAKVYQLGGTRTNKGLQLRHGNDQRVFRLEFVSNQEFTESEFMKWKEAMFS 438
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
G+ LPT DE+ +K I+ + Y++ ++D+E+IV+EKERF+ P NYAMKKTQL+KE+
Sbjct: 439 AGMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKA 498
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIMV 308
MA+ GD ++A +Q ++++LEERA LD+ RT IS+ISYIN RNR N+ E+EKA++
Sbjct: 499 MAEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAISYINQRNREWNIVESEKALVA 558
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 38/48 (79%)
Query: 338 EELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
EELNR+RLSR K+E+ H+P F + V GCFVRIGIGN+ P+YRV+E
Sbjct: 334 EELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAE 381
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMAQ 68
+IV+EKERF+ P NYAMKKTQL+KE+ MA+
Sbjct: 471 EIVKEKERFRKAPPNYAMKKTQLLKEKAMAE 501
>gi|390468716|ref|XP_002753567.2| PREDICTED: RNA polymerase-associated protein RTF1 homolog
[Callithrix jacchus]
gi|403289177|ref|XP_003935742.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Saimiri
boliviensis boliviensis]
gi|119612898|gb|EAW92492.1| Rtf1, Paf1/RNA polymerase II complex component, homolog (S.
cerevisiae), isoform CRA_c [Homo sapiens]
gi|168267242|dbj|BAG09677.1| RNA polymerase-associated protein RTF1 homolog [synthetic
construct]
Length = 670
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 101/180 (56%), Positives = 140/180 (77%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI+GV ET K+Y LG TRTNKGL+LRHGN +RVFRLEF+SNQEFTESEF++WK+ +
Sbjct: 362 VAEITGVVETAKVYQLGGTRTNKGLQLRHGNDQRVFRLEFVSNQEFTESEFMKWKEAMFS 421
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
G+ LPT DE+ +K I+ + Y++ ++D+E+IV+EKERF+ P NYAMKKTQL+KE+
Sbjct: 422 AGMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKA 481
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIMV 308
MA+ GD ++A +Q ++++LEERA LD+ RT IS+ISYIN RNR N+ E+EKA++
Sbjct: 482 MAEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAISYINQRNREWNIVESEKALVA 541
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 38/48 (79%)
Query: 338 EELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
EELNR+RLSR K+E+ H+P F + V GCFVRIGIGN+ P+YRV+E
Sbjct: 317 EELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAE 364
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMAQ 68
+IV+EKERF+ P NYAMKKTQL+KE+ MA+
Sbjct: 454 EIVKEKERFRKAPPNYAMKKTQLLKEKAMAE 484
>gi|397512664|ref|XP_003826660.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase-associated protein
RTF1 homolog [Pan paniscus]
Length = 710
Score = 219 bits (559), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 101/180 (56%), Positives = 140/180 (77%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI+GV ET K+Y LG TRTNKGL+LRHGN +RVFRLEF+SNQEFTESEF++WK+ +
Sbjct: 402 VAEITGVVETAKVYQLGGTRTNKGLQLRHGNDQRVFRLEFVSNQEFTESEFMKWKEAMFS 461
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
G+ LPT DE+ +K I+ + Y++ ++D+E+IV+EKERF+ P NYAMKKTQL+KE+
Sbjct: 462 AGMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKA 521
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIMV 308
MA+ GD ++A +Q ++++LEERA LD+ RT IS+ISYIN RNR N+ E+EKA++
Sbjct: 522 MAEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAISYINQRNREWNIVESEKALVA 581
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 38/48 (79%)
Query: 338 EELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
EELNR+RLSR K+E+ H+P F + V GCFVRIGIGN+ P+YRV+E
Sbjct: 357 EELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAE 404
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMAQ 68
+IV+EKERF+ P NYAMKKTQL+KE+ MA+
Sbjct: 494 EIVKEKERFRKAPPNYAMKKTQLLKEKAMAE 524
>gi|313104179|sp|Q5RAD5.2|RTF1_PONAB RecName: Full=RNA polymerase-associated protein RTF1 homolog
Length = 665
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 101/180 (56%), Positives = 140/180 (77%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI+GV ET K+Y LG TRTNKGL+LRHGN +RVFRLEF+SNQEFTESEF++WK+ +
Sbjct: 397 VAEITGVVETAKVYQLGGTRTNKGLQLRHGNDQRVFRLEFVSNQEFTESEFMKWKEAMFS 456
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
G+ LPT DE+ +K I+ + Y++ ++D+E+IV+EKERF+ P NYAMKKTQL+KE+
Sbjct: 457 AGMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKA 516
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIMV 308
MA+ GD ++A +Q ++++LEERA LD+ RT IS+ISYIN RNR N+ E+EKA++
Sbjct: 517 MAEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAISYINQRNREWNIVESEKALVA 576
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 38/48 (79%)
Query: 338 EELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
EELNR+RLSR K+E+ H+P F + V GCFVRIGIGN+ P+YRV+E
Sbjct: 352 EELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAE 399
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMAQ 68
+IV+EKERF+ P NYAMKKTQL+KE+ MA+
Sbjct: 489 EIVKEKERFRKAPPNYAMKKTQLLKEKAMAE 519
>gi|148696021|gb|EDL27968.1| mCG9728 [Mus musculus]
Length = 633
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 101/180 (56%), Positives = 140/180 (77%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI+GV ET K+Y LG TRTNKGL+LRHGN +RVFRLEF+SNQEFTESEF++WK+ +
Sbjct: 319 VAEITGVVETAKVYQLGGTRTNKGLQLRHGNDQRVFRLEFVSNQEFTESEFMKWKEAMFS 378
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
G+ LPT DE+ +K I+ + Y++ ++D+E+IV+EKERF+ P NYAMKKTQL+KE+
Sbjct: 379 AGMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKA 438
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIMV 308
MA+ GD ++A +Q ++++LEERA LD+ RT IS+ISYIN RNR N+ E+EKA++
Sbjct: 439 MAEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAISYINQRNREWNIVESEKALVA 498
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 38/48 (79%)
Query: 338 EELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
EELNR+RLSR K+E+ H+P F + V GCFVRIGIGN+ P+YRV+E
Sbjct: 274 EELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAE 321
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMAQ 68
+IV+EKERF+ P NYAMKKTQL+KE+ MA+
Sbjct: 411 EIVKEKERFRKAPPNYAMKKTQLLKEKAMAE 441
>gi|395503439|ref|XP_003756073.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog
[Sarcophilus harrisii]
Length = 907
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 101/180 (56%), Positives = 140/180 (77%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI+GV ET K+Y LG TRTNKGL+LRHGN +RVFRLEF+SNQEFTESEF++WK+ +
Sbjct: 599 VAEITGVVETAKVYQLGGTRTNKGLQLRHGNDQRVFRLEFVSNQEFTESEFMKWKEAMFS 658
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
G+ LPT DE+ +K I+ + Y++ ++D+E+IV+EKERF+ P NYAMKKTQL+KE+
Sbjct: 659 AGMQLPTLDEINKKEVSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKA 718
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIMV 308
MA+ GD ++A +Q ++++LEERA LD+ RT IS+ISYIN RNR N+ E+EKA++
Sbjct: 719 MAEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAISYINQRNREWNIVESEKALVA 778
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 39/52 (75%)
Query: 334 IETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
+ EELNR+RLSR K+E+ H+P F + V GCFVRIGIGN+ P+YRV+E
Sbjct: 550 VSLPEELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAE 601
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMAQ 68
+IV+EKERF+ P NYAMKKTQL+KE+ MA+
Sbjct: 691 EIVKEKERFRKAPPNYAMKKTQLLKEKAMAE 721
>gi|395837918|ref|XP_003791875.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase-associated protein
RTF1 homolog [Otolemur garnettii]
Length = 684
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 101/180 (56%), Positives = 140/180 (77%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI+GV ET K+Y LG TRTNKGL+LRHGN +RVFRLEF+SNQEFTESEF++WK+ +
Sbjct: 376 VAEITGVVETAKVYQLGGTRTNKGLQLRHGNDQRVFRLEFVSNQEFTESEFMKWKEAMFS 435
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
G+ LPT DE+ +K I+ + Y++ ++D+E+IV+EKERF+ P NYAMKKTQL+KE+
Sbjct: 436 AGMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKA 495
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIMV 308
MA+ GD ++A +Q ++++LEERA LD+ RT IS+ISYIN RNR N+ E+EKA++
Sbjct: 496 MAEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAISYINQRNREWNIVESEKALVA 555
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 38/48 (79%)
Query: 338 EELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
EELNR+RLSR K+E+ H+P F + V GCFVRIGIGN+ P+YRV+E
Sbjct: 331 EELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAE 378
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMAQ 68
+IV+EKERF+ P NYAMKKTQL+KE+ MA+
Sbjct: 468 EIVKEKERFRKAPPNYAMKKTQLLKEKAMAE 498
>gi|126278415|ref|XP_001381216.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog
[Monodelphis domestica]
Length = 709
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 101/180 (56%), Positives = 140/180 (77%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI+GV ET K+Y LG TRTNKGL+LRHGN +RVFRLEF+SNQEFTESEF++WK+ +
Sbjct: 401 VAEITGVVETAKVYQLGGTRTNKGLQLRHGNDQRVFRLEFVSNQEFTESEFMKWKEAMFS 460
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
G+ LPT DE+ +K I+ + Y++ ++D+E+IV+EKERF+ P NYAMKKTQL+KE+
Sbjct: 461 AGMQLPTLDEINKKEVSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKA 520
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIMV 308
MA+ GD ++A +Q ++++LEERA LD+ RT IS+ISYIN RNR N+ E+EKA++
Sbjct: 521 MAEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAISYINQRNREWNIVESEKALVA 580
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 38/48 (79%)
Query: 338 EELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
EELNR+RLSR K+E+ H+P F + V GCFVRIGIGN+ P+YRV+E
Sbjct: 356 EELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAE 403
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMAQ 68
+IV+EKERF+ P NYAMKKTQL+KE+ MA+
Sbjct: 493 EIVKEKERFRKAPPNYAMKKTQLLKEKAMAE 523
>gi|195976782|ref|NP_055953.3| RNA polymerase-associated protein RTF1 homolog [Homo sapiens]
gi|114656497|ref|XP_001142072.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Pan
troglodytes]
gi|332235216|ref|XP_003266801.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Nomascus
leucogenys]
gi|426378728|ref|XP_004056064.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Gorilla
gorilla gorilla]
gi|313104316|sp|Q92541.4|RTF1_HUMAN RecName: Full=RNA polymerase-associated protein RTF1 homolog
gi|410215686|gb|JAA05062.1| Rtf1, Paf1/RNA polymerase II complex component, homolog [Pan
troglodytes]
gi|410308526|gb|JAA32863.1| Rtf1, Paf1/RNA polymerase II complex component, homolog [Pan
troglodytes]
Length = 710
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 101/180 (56%), Positives = 140/180 (77%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI+GV ET K+Y LG TRTNKGL+LRHGN +RVFRLEF+SNQEFTESEF++WK+ +
Sbjct: 402 VAEITGVVETAKVYQLGGTRTNKGLQLRHGNDQRVFRLEFVSNQEFTESEFMKWKEAMFS 461
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
G+ LPT DE+ +K I+ + Y++ ++D+E+IV+EKERF+ P NYAMKKTQL+KE+
Sbjct: 462 AGMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKA 521
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIMV 308
MA+ GD ++A +Q ++++LEERA LD+ RT IS+ISYIN RNR N+ E+EKA++
Sbjct: 522 MAEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAISYINQRNREWNIVESEKALVA 581
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 38/48 (79%)
Query: 338 EELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
EELNR+RLSR K+E+ H+P F + V GCFVRIGIGN+ P+YRV+E
Sbjct: 357 EELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAE 404
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMAQ 68
+IV+EKERF+ P NYAMKKTQL+KE+ MA+
Sbjct: 494 EIVKEKERFRKAPPNYAMKKTQLLKEKAMAE 524
>gi|109080731|ref|XP_001100507.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Macaca
mulatta]
Length = 711
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 101/180 (56%), Positives = 140/180 (77%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI+GV ET K+Y LG TRTNKGL+LRHGN +RVFRLEF+SNQEFTESEF++WK+ +
Sbjct: 403 VAEITGVVETAKVYQLGGTRTNKGLQLRHGNDQRVFRLEFVSNQEFTESEFMKWKEAMFS 462
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
G+ LPT DE+ +K I+ + Y++ ++D+E+IV+EKERF+ P NYAMKKTQL+KE+
Sbjct: 463 AGMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKA 522
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIMV 308
MA+ GD ++A +Q ++++LEERA LD+ RT IS+ISYIN RNR N+ E+EKA++
Sbjct: 523 MAEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAISYINQRNREWNIVESEKALVA 582
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 38/48 (79%)
Query: 338 EELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
EELNR+RLSR K+E+ H+P F + V GCFVRIGIGN+ P+YRV+E
Sbjct: 358 EELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAE 405
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMAQ 68
+IV+EKERF+ P NYAMKKTQL+KE+ MA+
Sbjct: 495 EIVKEKERFRKAPPNYAMKKTQLLKEKAMAE 525
>gi|444706821|gb|ELW48139.1| RNA polymerase-associated protein RTF1 like protein [Tupaia
chinensis]
Length = 954
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 101/180 (56%), Positives = 140/180 (77%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI+GV ET K+Y LG TRTNKGL+LRHGN +RVFRLEF+SNQEFTESEF++WK+ +
Sbjct: 354 VAEITGVVETAKVYQLGGTRTNKGLQLRHGNDQRVFRLEFVSNQEFTESEFMKWKEAMFS 413
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
G+ LPT DE+ +K I+ + Y++ ++D+E+IV+EKERF+ P NYAMKKTQL+KE+
Sbjct: 414 AGMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKA 473
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIMV 308
MA+ GD ++A +Q ++++LEERA LD+ RT IS+ISYIN RNR N+ E+EKA++
Sbjct: 474 MAEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAISYINQRNREWNIVESEKALVA 533
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 39/52 (75%)
Query: 334 IETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
+ EELNR+RLSR K+E+ H+P F + V GCFVRIGIGN+ P+YRV+E
Sbjct: 305 VSLPEELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAE 356
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMAQ 68
+IV+EKERF+ P NYAMKKTQL+KE+ MA+
Sbjct: 446 EIVKEKERFRKAPPNYAMKKTQLLKEKAMAE 476
>gi|55729077|emb|CAH91275.1| hypothetical protein [Pongo abelii]
Length = 630
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 101/182 (55%), Positives = 140/182 (76%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI+GV ET K+Y LG TRTNKGL+LRHGN +RVFRLEF+SNQEFTESEF++WK+ +
Sbjct: 362 VAEITGVVETAKVYQLGGTRTNKGLQLRHGNDQRVFRLEFVSNQEFTESEFMKWKEAMFS 421
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
G+ LPT DE+ +K I+ + Y++ ++D+E+IV+EKERF+ P NYAMKKTQL+KE+
Sbjct: 422 AGMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKA 481
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIMV 308
MA+ GD ++A +Q ++++LEERA LD+ RT IS+ISYIN RNR N+ E+EKA++
Sbjct: 482 MAEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAISYINQRNREWNIVESEKALVA 541
Query: 309 SC 310
Sbjct: 542 ES 543
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 38/48 (79%)
Query: 338 EELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
EELNR+RLSR K+E+ H+P F + V GCFVRIGIGN+ P+YRV+E
Sbjct: 317 EELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAE 364
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 27/32 (84%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMAQS 69
+IV+EKERF+ P NYAMKKTQL+KE+ MA+
Sbjct: 454 EIVKEKERFRKAPPNYAMKKTQLLKEKAMAED 485
>gi|73999803|ref|XP_544630.2| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform 1
[Canis lupus familiaris]
Length = 714
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 101/180 (56%), Positives = 140/180 (77%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI+GV ET K+Y LG TRTNKGL+LRHGN +RVFRLEF+SNQEFTESEF++WK+ +
Sbjct: 406 VAEITGVVETAKVYQLGGTRTNKGLQLRHGNDQRVFRLEFVSNQEFTESEFMKWKEAMFS 465
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
G+ LPT DE+ +K I+ + Y++ ++D+E+IV+EKERF+ P NYAMKKTQL+KE+
Sbjct: 466 AGMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKA 525
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIMV 308
MA+ GD ++A +Q ++++LEERA LD+ RT IS+ISYIN RNR N+ E+EKA++
Sbjct: 526 MAEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAISYINQRNREWNIVESEKALVA 585
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 38/48 (79%)
Query: 338 EELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
EELNR+RLSR K+E+ H+P F + V GCFVRIGIGN+ P+YRV+E
Sbjct: 361 EELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAE 408
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMAQ 68
+IV+EKERF+ P NYAMKKTQL+KE+ MA+
Sbjct: 498 EIVKEKERFRKAPPNYAMKKTQLLKEKAMAE 528
>gi|195976788|ref|NP_084388.2| RNA polymerase-associated protein RTF1 homolog precursor [Mus
musculus]
gi|313471454|sp|A2AQ19.1|RTF1_MOUSE RecName: Full=RNA polymerase-associated protein RTF1 homolog
Length = 715
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 101/180 (56%), Positives = 140/180 (77%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI+GV ET K+Y LG TRTNKGL+LRHGN +RVFRLEF+SNQEFTESEF++WK+ +
Sbjct: 407 VAEITGVVETAKVYQLGGTRTNKGLQLRHGNDQRVFRLEFVSNQEFTESEFMKWKEAMFS 466
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
G+ LPT DE+ +K I+ + Y++ ++D+E+IV+EKERF+ P NYAMKKTQL+KE+
Sbjct: 467 AGMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKA 526
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIMV 308
MA+ GD ++A +Q ++++LEERA LD+ RT IS+ISYIN RNR N+ E+EKA++
Sbjct: 527 MAEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAISYINQRNREWNIVESEKALVA 586
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 38/48 (79%)
Query: 338 EELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
EELNR+RLSR K+E+ H+P F + V GCFVRIGIGN+ P+YRV+E
Sbjct: 362 EELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAE 409
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMAQ 68
+IV+EKERF+ P NYAMKKTQL+KE+ MA+
Sbjct: 499 EIVKEKERFRKAPPNYAMKKTQLLKEKAMAE 529
>gi|291403190|ref|XP_002718013.1| PREDICTED: Paf1/RNA polymerase II complex component [Oryctolagus
cuniculus]
Length = 710
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 101/180 (56%), Positives = 140/180 (77%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI+GV ET K+Y LG TRTNKGL+LRHGN +RVFRLEF+SNQEFTESEF++WK+ +
Sbjct: 402 VAEITGVVETAKVYQLGGTRTNKGLQLRHGNDQRVFRLEFVSNQEFTESEFMKWKEAMFS 461
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
G+ LPT DE+ +K I+ + Y++ ++D+E+IV+EKERF+ P NYAMKKTQL+KE+
Sbjct: 462 AGMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKA 521
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIMV 308
MA+ GD ++A +Q ++++LEERA LD+ RT IS+ISYIN RNR N+ E+EKA++
Sbjct: 522 MAEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAISYINQRNREWNIVESEKALVA 581
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 38/48 (79%)
Query: 338 EELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
EELNR+RLSR K+E+ H+P F + V GCFVRIGIGN+ P+YRV+E
Sbjct: 357 EELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAE 404
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMAQ 68
+IV+EKERF+ P NYAMKKTQL+KE+ MA+
Sbjct: 494 EIVKEKERFRKAPPNYAMKKTQLLKEKAMAE 524
>gi|344294018|ref|XP_003418716.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog
[Loxodonta africana]
Length = 710
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 101/180 (56%), Positives = 140/180 (77%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI+GV ET K+Y LG TRTNKGL+LRHGN +RVFRLEF+SNQEFTESEF++WK+ +
Sbjct: 402 VAEITGVVETAKVYQLGGTRTNKGLQLRHGNDQRVFRLEFVSNQEFTESEFMKWKEAMFS 461
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
G+ LPT DE+ +K I+ + Y++ ++D+E+IV+EKERF+ P NYAMKKTQL+KE+
Sbjct: 462 AGMQLPTLDEINKKEFSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKA 521
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIMV 308
MA+ GD ++A +Q ++++LEERA LD+ RT IS+ISYIN RNR N+ E+EKA++
Sbjct: 522 MAEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAISYINQRNREWNIVESEKALVA 581
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 38/48 (79%)
Query: 338 EELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
EELNR+RLSR K+E+ H+P F + V GCFVRIGIGN+ P+YRV+E
Sbjct: 357 EELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAE 404
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMAQ 68
+IV+EKERF+ P NYAMKKTQL+KE+ MA+
Sbjct: 494 EIVKEKERFRKAPPNYAMKKTQLLKEKAMAE 524
>gi|195027107|ref|XP_001986425.1| GH21360 [Drosophila grimshawi]
gi|193902425|gb|EDW01292.1| GH21360 [Drosophila grimshawi]
Length = 796
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 107/179 (59%), Positives = 140/179 (78%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI GV ETGKIYSLG TRTN+GL+L+HG ERVFRLEFISNQEFTE+EF +W D C
Sbjct: 497 VAEIVGVVETGKIYSLGTTRTNRGLRLKHGTQERVFRLEFISNQEFTETEFNKWVDICQQ 556
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
V +PT D +E K+ +I+ + Y++K+EDV++IV EK RF+ P NYAMKKT LMKERD
Sbjct: 557 SHVPMPTIDLIEIKANDIKKALNYEYKDEDVDKIVEEKNRFRNRPTNYAMKKTCLMKERD 616
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIM 307
A +GD + A+ L ++ID LE RA+ELDK R+ +++ ISYIN+RNR++NV++AEKAIM
Sbjct: 617 AAMLRGDYDIANDLGQQIDQLESRASELDKRRSHSLNLISYINDRNRKRNVQDAEKAIM 675
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 43/53 (81%)
Query: 333 YIETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
+I T+E+LN++RLSRFKME+ V+LPIF V+ CFVRI IGNN P+YRV+E
Sbjct: 447 FITTREDLNKLRLSRFKMERFVNLPIFESTVVNCFVRISIGNNGQKPVYRVAE 499
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 23/30 (76%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMA 67
+IV EK RF+ P NYAMKKT LMKERD A
Sbjct: 589 KIVEEKNRFRNRPTNYAMKKTCLMKERDAA 618
>gi|348579425|ref|XP_003475480.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Cavia
porcellus]
Length = 831
Score = 218 bits (555), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 100/180 (55%), Positives = 140/180 (77%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI+GV ET K+Y LG TRTNKGL+LRHG+ +RVFRLEF+SNQEFTESEF++WK+ +
Sbjct: 523 VAEITGVVETAKVYQLGGTRTNKGLQLRHGSDQRVFRLEFVSNQEFTESEFMKWKEAMFS 582
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
G+ LPT DE+ +K I+ + Y++ ++D+E+IV+EKERF+ P NYAMKKTQL+KE+
Sbjct: 583 AGMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKA 642
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIMV 308
MA+ GD ++A +Q ++++LEERA LD+ RT IS+ISYIN RNR N+ E+EKA++
Sbjct: 643 MAEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAISYINQRNREWNIVESEKALVA 702
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 38/48 (79%)
Query: 338 EELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
EELNR+RLSR K+E+ H+P F + V GCFVRIGIGN+ P+YRV+E
Sbjct: 478 EELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAE 525
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMAQ 68
+IV+EKERF+ P NYAMKKTQL+KE+ MA+
Sbjct: 615 EIVKEKERFRKAPPNYAMKKTQLLKEKAMAE 645
>gi|426233018|ref|XP_004010514.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Ovis
aries]
Length = 585
Score = 218 bits (554), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 100/180 (55%), Positives = 140/180 (77%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI+GV ET K+Y LG TRTNKGL+LRHG+ +RVFRLEF+SNQEFTESEF++WK+ +
Sbjct: 277 VAEITGVVETAKVYQLGGTRTNKGLQLRHGSDQRVFRLEFVSNQEFTESEFMKWKEAMFS 336
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
G+ LPT DE+ +K I+ + Y++ ++D+E+IV+EKERF+ P NYAMKKTQL+KE+
Sbjct: 337 AGMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKA 396
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIMV 308
MA+ GD ++A +Q ++++LEERA LD+ RT IS+ISYIN RNR N+ E+EKA++
Sbjct: 397 MAEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAISYINQRNREWNIVESEKALVA 456
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 38/48 (79%)
Query: 338 EELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
EELNR+RLSR K+E+ H+P F + V GCFVRIGIGN+ P+YRV+E
Sbjct: 232 EELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAE 279
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMAQ 68
+IV+EKERF+ P NYAMKKTQL+KE+ MA+
Sbjct: 369 EIVKEKERFRKAPPNYAMKKTQLLKEKAMAE 399
>gi|417412100|gb|JAA52463.1| Putative paf1/rna polymer, partial [Desmodus rotundus]
Length = 644
Score = 218 bits (554), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 100/180 (55%), Positives = 140/180 (77%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI+GV ET K+Y LG TRTNKGL+LRHG+ +RVFRLEF+SNQEFTESEF++WK+ +
Sbjct: 336 VAEITGVVETAKVYQLGGTRTNKGLQLRHGSDQRVFRLEFVSNQEFTESEFMKWKEAMFS 395
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
G+ LPT DE+ +K I+ + Y++ ++D+E+IV+EKERF+ P NYAMKKTQL+KE+
Sbjct: 396 AGMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKA 455
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIMV 308
MA+ GD ++A +Q ++++LEERA LD+ RT IS+ISYIN RNR N+ E+EKA++
Sbjct: 456 MAEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAISYINQRNREWNIVESEKALVA 515
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 38/48 (79%)
Query: 338 EELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
EELNR+RLSR K+E+ H+P F + V GCFVRIGIGN+ P+YRV+E
Sbjct: 291 EELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAE 338
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMAQ 68
+IV+EKERF+ P NYAMKKTQL+KE+ MA+
Sbjct: 428 EIVKEKERFRKAPPNYAMKKTQLLKEKAMAE 458
>gi|350578786|ref|XP_003121657.3| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Sus
scrofa]
Length = 1026
Score = 217 bits (553), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 100/180 (55%), Positives = 140/180 (77%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI+GV ET K+Y LG TRTNKGL+LRHG+ +RVFRLEF+SNQEFTESEF++WK+ +
Sbjct: 718 VAEITGVVETAKVYQLGGTRTNKGLQLRHGSDQRVFRLEFVSNQEFTESEFMKWKEAMFS 777
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
G+ LPT DE+ +K I+ + Y++ ++D+E+IV+EKERF+ P NYAMKKTQL+KE+
Sbjct: 778 AGMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKA 837
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIMV 308
MA+ GD ++A +Q ++++LEERA LD+ RT IS+ISYIN RNR N+ E+EKA++
Sbjct: 838 MAEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAISYINQRNREWNIVESEKALVA 897
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 38/48 (79%)
Query: 338 EELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
EELNR+RLSR K+E+ H+P F + V GCFVRIGIGN+ P+YRV+E
Sbjct: 673 EELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAE 720
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMAQ 68
+IV+EKERF+ P NYAMKKTQL+KE+ MA+
Sbjct: 810 EIVKEKERFRKAPPNYAMKKTQLLKEKAMAE 840
>gi|118091596|ref|XP_421139.2| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Gallus
gallus]
Length = 670
Score = 217 bits (553), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 100/180 (55%), Positives = 140/180 (77%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI+GV ET K+Y LG TRTNKGL+LRHG+ +RVFRLEF+SNQEFTESEF++WK+ +
Sbjct: 362 VAEITGVVETAKVYQLGGTRTNKGLQLRHGSDQRVFRLEFVSNQEFTESEFMKWKEAMFS 421
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
G+ LPT DE+ +K I+ + Y++ ++D+E+IV+EKERF+ P NYAMKKTQL+KE+
Sbjct: 422 AGMQLPTLDEINKKEVSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKA 481
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIMV 308
MA+ GD ++A +Q ++++LEERA LD+ RT IS+ISYIN RNR N+ E+EKA++
Sbjct: 482 MAEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAISYINQRNREWNIVESEKALVA 541
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 38/48 (79%)
Query: 338 EELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
EELNR+RLSR K+E+ H+P F + V GCFVRIGIGN+ P+YRV+E
Sbjct: 317 EELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAE 364
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMAQ 68
+IV+EKERF+ P NYAMKKTQL+KE+ MA+
Sbjct: 454 EIVKEKERFRKAPPNYAMKKTQLLKEKAMAE 484
>gi|440898983|gb|ELR50366.1| RNA polymerase-associated protein RTF1-like protein, partial [Bos
grunniens mutus]
Length = 647
Score = 217 bits (553), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 100/180 (55%), Positives = 140/180 (77%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI+GV ET K+Y LG TRTNKGL+LRHG+ +RVFRLEF+SNQEFTESEF++WK+ +
Sbjct: 337 VAEITGVVETAKVYQLGGTRTNKGLQLRHGSDQRVFRLEFVSNQEFTESEFMKWKEAMFS 396
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
G+ LPT DE+ +K I+ + Y++ ++D+E+IV+EKERF+ P NYAMKKTQL+KE+
Sbjct: 397 AGMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKA 456
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIMV 308
MA+ GD ++A +Q ++++LEERA LD+ RT IS+ISYIN RNR N+ E+EKA++
Sbjct: 457 MAEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAISYINQRNREWNIVESEKALVA 516
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 38/48 (79%)
Query: 338 EELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
EELNR+RLSR K+E+ H+P F + V GCFVRIGIGN+ P+YRV+E
Sbjct: 292 EELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAE 339
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMAQ 68
+IV+EKERF+ P NYAMKKTQL+KE+ MA+
Sbjct: 429 EIVKEKERFRKAPPNYAMKKTQLLKEKAMAE 459
>gi|449274649|gb|EMC83727.1| RNA polymerase-associated protein RTF1 like protein [Columba livia]
Length = 650
Score = 217 bits (553), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 100/180 (55%), Positives = 139/180 (77%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI+GV ET K+Y LG TRTNKGL+LRHG+ RVFRLEF+SNQEFTESEF++WK+ +
Sbjct: 343 VAEITGVVETAKVYQLGGTRTNKGLQLRHGSDSRVFRLEFVSNQEFTESEFMKWKEAMFS 402
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
G+ LPT DE+ +K I+ + Y++ ++D+E+IV+EKERF+ P NYAMKKTQL+KE+
Sbjct: 403 AGMQLPTLDEINKKEVSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKA 462
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIMV 308
MA+ GD ++A +Q ++++LEERA LD+ RT IS+ISYIN RNR N+ E+EKA++
Sbjct: 463 MAEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAISYINQRNREWNIVESEKALVA 522
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 38/48 (79%)
Query: 338 EELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
EELNR+RLSR K+E+ H+P F + V GCFVRIGIGN+ P+YRV+E
Sbjct: 298 EELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAE 345
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMAQ 68
+IV+EKERF+ P NYAMKKTQL+KE+ MA+
Sbjct: 435 EIVKEKERFRKAPPNYAMKKTQLLKEKAMAE 465
>gi|53131208|emb|CAG31800.1| hypothetical protein RCJMB04_11g9 [Gallus gallus]
Length = 585
Score = 217 bits (553), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 100/180 (55%), Positives = 140/180 (77%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI+GV ET K+Y LG TRTNKGL+LRHG+ +RVFRLEF+SNQEFTESEF++WK+ +
Sbjct: 362 VAEITGVVETAKVYQLGGTRTNKGLQLRHGSDQRVFRLEFVSNQEFTESEFMKWKEAMFS 421
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
G+ LPT DE+ +K I+ + Y++ ++D+E+IV+EKERF+ P NYAMKKTQL+KE+
Sbjct: 422 AGMQLPTLDEINKKEVSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKA 481
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIMV 308
MA+ GD ++A +Q ++++LEERA LD+ RT IS+ISYIN RNR N+ E+EKA++
Sbjct: 482 MAEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAISYINQRNREWNIVESEKALVA 541
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 38/48 (79%)
Query: 338 EELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
EELNR+RLSR K+E+ H+P F + V GCFVRIGIGN+ P+YRV+E
Sbjct: 317 EELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAE 364
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMAQ 68
+IV+EKERF+ P NYAMKKTQL+KE+ MA+
Sbjct: 454 EIVKEKERFRKAPPNYAMKKTQLLKEKAMAE 484
>gi|136255554|ref|NP_001077046.1| RNA polymerase-associated protein RTF1 homolog [Danio rerio]
gi|126635343|dbj|BAF48399.1| RNA polymerase-associated protein Rtf1 homolog [Danio rerio]
Length = 681
Score = 217 bits (553), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 102/180 (56%), Positives = 137/180 (76%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI V ET KIY LG TRTNKGL+LRHGN RVFRLEF+SNQEFTESEF++WK+ M
Sbjct: 368 VAEIIDVVETAKIYQLGSTRTNKGLQLRHGNDTRVFRLEFVSNQEFTESEFMKWKEAMMI 427
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
G+ LPT DE+ +K + I+ + Y++ ++D+E IV+EK+RF+ P NYAMKKTQL+KE+
Sbjct: 428 AGMQLPTLDEINKKEQSIKEAVNYKFNDKDIEDIVKEKDRFRKAPPNYAMKKTQLLKEKA 487
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIMV 308
MA+ GD ++A LQ ++++LEERA LD+ RT IS+ISYIN RNR N+ E+EKA++
Sbjct: 488 MAEESGDGDKAKTLQDQLNELEERAEALDRQRTKNISAISYINQRNRSWNIVESEKALVA 547
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 39/48 (81%)
Query: 338 EELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
+ELNRIRLSR K+E+ H+P F + V GCFVRIGIGN++ P+YRV+E
Sbjct: 323 DELNRIRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNSSNKPVYRVAE 370
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 26/30 (86%)
Query: 39 IVREKERFKPTPYNYAMKKTQLMKERDMAQ 68
IV+EK+RF+ P NYAMKKTQL+KE+ MA+
Sbjct: 461 IVKEKDRFRKAPPNYAMKKTQLLKEKAMAE 490
>gi|125810847|ref|XP_001361651.1| GA10665 [Drosophila pseudoobscura pseudoobscura]
gi|54636827|gb|EAL26230.1| GA10665 [Drosophila pseudoobscura pseudoobscura]
Length = 764
Score = 217 bits (553), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 106/179 (59%), Positives = 141/179 (78%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI+GV ETGKIYSLG TRTN+GL+L+HG ERVFRLEFISNQEFTE+EF +W + C
Sbjct: 467 VAEITGVVETGKIYSLGTTRTNRGLRLKHGTQERVFRLEFISNQEFTENEFKKWHEVCQH 526
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
V +P+ + +E K+ +I+ + Y++K+EDV++IV EK RF+ P NYAMKKT LMKERD
Sbjct: 527 AHVQMPSIELIEIKANDIKKALNYEFKDEDVDKIVEEKNRFRNRPTNYAMKKTCLMKERD 586
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIM 307
A +GD + A L ++ID+LE RA+ELDK R+ T++ ISYIN+RNR+KNV++AEKAIM
Sbjct: 587 AAMLRGDYDIAQDLSQQIDELENRASELDKRRSHTLNLISYINDRNRKKNVQDAEKAIM 645
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 41/53 (77%)
Query: 333 YIETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
+I +E+LN++RLSR KME+ V+LPIF V+ CFVRI IGNN P+YRV+E
Sbjct: 417 FISNREDLNKLRLSRHKMERFVNLPIFESTVLNCFVRISIGNNGQKPVYRVAE 469
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 23/30 (76%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMA 67
+IV EK RF+ P NYAMKKT LMKERD A
Sbjct: 559 KIVEEKNRFRNRPTNYAMKKTCLMKERDAA 588
>gi|402874039|ref|XP_003900854.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Papio
anubis]
Length = 710
Score = 217 bits (552), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 100/180 (55%), Positives = 140/180 (77%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI+GV ET K+Y LG TRTNKGL+LRHG+ +RVFRLEF+SNQEFTESEF++WK+ +
Sbjct: 402 VAEITGVVETAKVYQLGGTRTNKGLQLRHGSDQRVFRLEFVSNQEFTESEFMKWKEAMFS 461
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
G+ LPT DE+ +K I+ + Y++ ++D+E+IV+EKERF+ P NYAMKKTQL+KE+
Sbjct: 462 AGMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKA 521
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIMV 308
MA+ GD ++A +Q ++++LEERA LD+ RT IS+ISYIN RNR N+ E+EKA++
Sbjct: 522 MAEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAISYINQRNREWNIVESEKALVA 581
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 38/48 (79%)
Query: 338 EELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
EELNR+RLSR K+E+ H+P F + V GCFVRIGIGN+ P+YRV+E
Sbjct: 357 EELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAE 404
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMAQ 68
+IV+EKERF+ P NYAMKKTQL+KE+ MA+
Sbjct: 494 EIVKEKERFRKAPPNYAMKKTQLLKEKAMAE 524
>gi|326920482|ref|XP_003206501.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog
[Meleagris gallopavo]
Length = 699
Score = 217 bits (552), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 100/180 (55%), Positives = 140/180 (77%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI+GV ET K+Y LG TRTNKGL+LRHG+ +RVFRLEF+SNQEFTESEF++WK+ +
Sbjct: 391 VAEITGVVETAKVYQLGGTRTNKGLQLRHGSDQRVFRLEFVSNQEFTESEFMKWKEAMFS 450
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
G+ LPT DE+ +K I+ + Y++ ++D+E+IV+EKERF+ P NYAMKKTQL+KE+
Sbjct: 451 AGMQLPTLDEINKKEVSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKA 510
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIMV 308
MA+ GD ++A +Q ++++LEERA LD+ RT IS+ISYIN RNR N+ E+EKA++
Sbjct: 511 MAEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAISYINQRNREWNIVESEKALVA 570
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 38/48 (79%)
Query: 338 EELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
EELNR+RLSR K+E+ H+P F + V GCFVRIGIGN+ P+YRV+E
Sbjct: 346 EELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAE 393
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMAQ 68
+IV+EKERF+ P NYAMKKTQL+KE+ MA+
Sbjct: 483 EIVKEKERFRKAPPNYAMKKTQLLKEKAMAE 513
>gi|300795026|ref|NP_001179414.1| RNA polymerase-associated protein RTF1 homolog [Bos taurus]
gi|296483279|tpg|DAA25394.1| TPA: Rtf1, Paf1/RNA polymerase II complex component, homolog [Bos
taurus]
Length = 714
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 100/180 (55%), Positives = 140/180 (77%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI+GV ET K+Y LG TRTNKGL+LRHG+ +RVFRLEF+SNQEFTESEF++WK+ +
Sbjct: 406 VAEITGVVETAKVYQLGGTRTNKGLQLRHGSDQRVFRLEFVSNQEFTESEFMKWKEAMFS 465
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
G+ LPT DE+ +K I+ + Y++ ++D+E+IV+EKERF+ P NYAMKKTQL+KE+
Sbjct: 466 AGMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKA 525
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIMV 308
MA+ GD ++A +Q ++++LEERA LD+ RT IS+ISYIN RNR N+ E+EKA++
Sbjct: 526 MAEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAISYINQRNREWNIVESEKALVA 585
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 38/48 (79%)
Query: 338 EELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
EELNR+RLSR K+E+ H+P F + V GCFVRIGIGN+ P+YRV+E
Sbjct: 361 EELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAE 408
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMAQ 68
+IV+EKERF+ P NYAMKKTQL+KE+ MA+
Sbjct: 498 EIVKEKERFRKAPPNYAMKKTQLLKEKAMAE 528
>gi|449502335|ref|XP_002199007.2| PREDICTED: RNA polymerase-associated protein RTF1 homolog
[Taeniopygia guttata]
Length = 585
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 100/180 (55%), Positives = 139/180 (77%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI+GV ET K+Y LG TRTNKGL+LRHG+ RVFRLEF+SNQEFTESEF++WK+ +
Sbjct: 277 VAEITGVVETAKVYQLGGTRTNKGLQLRHGSDSRVFRLEFVSNQEFTESEFMKWKEAMFS 336
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
G+ LPT DE+ +K I+ + Y++ ++D+E+IV+EKERF+ P NYAMKKTQL+KE+
Sbjct: 337 AGMQLPTLDEINKKEVSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKA 396
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIMV 308
MA+ GD ++A +Q ++++LEERA LD+ RT IS+ISYIN RNR N+ E+EKA++
Sbjct: 397 MAEDLGDQDKAKQIQDQLNELEERAEALDRQRTKNISAISYINQRNREWNIVESEKALVA 456
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 38/48 (79%)
Query: 338 EELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
EELNR+RLSR K+E+ H+P F + V GCFVRIGIGN+ P+YRV+E
Sbjct: 232 EELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAE 279
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMAQ 68
+IV+EKERF+ P NYAMKKTQL+KE+ MA+
Sbjct: 369 EIVKEKERFRKAPPNYAMKKTQLLKEKAMAE 399
>gi|195585680|ref|XP_002082608.1| GD11662 [Drosophila simulans]
gi|194194617|gb|EDX08193.1| GD11662 [Drosophila simulans]
Length = 775
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 107/179 (59%), Positives = 138/179 (77%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI GV ETGKIYSLG TRTN+GL+L+HG ERVFRLEFISNQEFTE+EF +W + C
Sbjct: 477 VAEIVGVVETGKIYSLGTTRTNRGLRLKHGTQERVFRLEFISNQEFTENEFNKWNEVCQQ 536
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
V +PT D + K +I+ + Y++K+EDV++IV EK RF+ P NYAMKKT LMKERD
Sbjct: 537 SHVQMPTIDLIAIKQNDIKKALNYEFKDEDVDKIVEEKNRFRNRPTNYAMKKTCLMKERD 596
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIM 307
A +GD + A L ++ID+LE RA+ELDK R+ T++ ISYIN+RNR+KNVE+AEKAI+
Sbjct: 597 AAMLRGDYDLAQDLGQQIDELENRASELDKRRSHTLNLISYINDRNRKKNVEDAEKAIL 655
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 43/53 (81%)
Query: 333 YIETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
+I T+E+LN++RLSR+KME+ V+LPIF V+ CFVRI IGNN P+YRV+E
Sbjct: 427 FITTREDLNKLRLSRYKMERFVNLPIFESTVLNCFVRISIGNNGQKPVYRVAE 479
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 23/30 (76%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMA 67
+IV EK RF+ P NYAMKKT LMKERD A
Sbjct: 569 KIVEEKNRFRNRPTNYAMKKTCLMKERDAA 598
>gi|195346702|ref|XP_002039896.1| GM15903 [Drosophila sechellia]
gi|194135245|gb|EDW56761.1| GM15903 [Drosophila sechellia]
Length = 775
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 107/179 (59%), Positives = 138/179 (77%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI GV ETGKIYSLG TRTN+GL+L+HG ERVFRLEFISNQEFTE+EF +W + C
Sbjct: 477 VAEIVGVVETGKIYSLGTTRTNRGLRLKHGTQERVFRLEFISNQEFTENEFNKWNEVCQQ 536
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
V +PT D + K +I+ + Y++K+EDV++IV EK RF+ P NYAMKKT LMKERD
Sbjct: 537 SHVQMPTIDLIAIKQNDIKKALNYEFKDEDVDKIVEEKNRFRNRPTNYAMKKTCLMKERD 596
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIM 307
A +GD + A L ++ID+LE RA+ELDK R+ T++ ISYIN+RNR+KNVE+AEKAI+
Sbjct: 597 AAMLRGDYDIAQDLGQQIDELENRASELDKRRSHTLNLISYINDRNRKKNVEDAEKAIL 655
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 43/53 (81%)
Query: 333 YIETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
+I T+E+LN++RLSR+KME+ V+LPIF V+ CFVRI IGNN P+YRV+E
Sbjct: 427 FITTREDLNKLRLSRYKMERFVNLPIFESTVLNCFVRISIGNNGQKPVYRVAE 479
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 23/30 (76%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMA 67
+IV EK RF+ P NYAMKKT LMKERD A
Sbjct: 569 KIVEEKNRFRNRPTNYAMKKTCLMKERDAA 598
>gi|20130239|ref|NP_611665.1| Rtf1 [Drosophila melanogaster]
gi|74872306|sp|Q9W261.1|RTF1_DROME RecName: Full=RNA polymerase-associated protein Rtf1; Short=dRtf1
gi|7291410|gb|AAF46837.1| Rtf1 [Drosophila melanogaster]
gi|363238656|gb|AEW12901.1| FI16824p1 [Drosophila melanogaster]
Length = 775
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 107/179 (59%), Positives = 138/179 (77%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI GV ETGKIYSLG TRTN+GL+L+HG ERVFRLEFISNQEFTE+EF +W + C
Sbjct: 477 VAEIVGVVETGKIYSLGTTRTNRGLRLKHGTQERVFRLEFISNQEFTENEFNKWNEVCQQ 536
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
V +PT D + K +I+ + Y++K+EDV++IV EK RF+ P NYAMKKT LMKERD
Sbjct: 537 SHVQMPTIDLIAIKQNDIKKALNYEFKDEDVDKIVEEKNRFRNRPTNYAMKKTCLMKERD 596
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIM 307
A +GD + A L ++ID+LE RA+ELDK R+ T++ ISYIN+RNR+KNVE+AEKAI+
Sbjct: 597 AAMLRGDYDIAQDLGQQIDELENRASELDKRRSHTLNLISYINDRNRKKNVEDAEKAIL 655
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 43/53 (81%)
Query: 333 YIETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
+I T+E+LN++RLSR+KME+ V+LPIF V+ CFVRI IGNN P+YRV+E
Sbjct: 427 FITTREDLNKLRLSRYKMERFVNLPIFESTVLNCFVRISIGNNGQKPVYRVAE 479
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 23/30 (76%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMA 67
+IV EK RF+ P NYAMKKT LMKERD A
Sbjct: 569 KIVEEKNRFRNRPTNYAMKKTCLMKERDAA 598
>gi|162944900|gb|ABY20519.1| LP07508p [Drosophila melanogaster]
Length = 785
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 107/179 (59%), Positives = 138/179 (77%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI GV ETGKIYSLG TRTN+GL+L+HG ERVFRLEFISNQEFTE+EF +W + C
Sbjct: 477 VAEIVGVVETGKIYSLGTTRTNRGLRLKHGTQERVFRLEFISNQEFTENEFNKWNEVCQQ 536
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
V +PT D + K +I+ + Y++K+EDV++IV EK RF+ P NYAMKKT LMKERD
Sbjct: 537 SHVQMPTIDLIAIKQNDIKKALNYEFKDEDVDKIVEEKNRFRNRPTNYAMKKTCLMKERD 596
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIM 307
A +GD + A L ++ID+LE RA+ELDK R+ T++ ISYIN+RNR+KNVE+AEKAI+
Sbjct: 597 AAMLRGDYDIAQDLGQQIDELENRASELDKRRSHTLNLISYINDRNRKKNVEDAEKAIL 655
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 43/53 (81%)
Query: 333 YIETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
+I T+E+LN++RLSR+KME+ V+LPIF V+ CFVRI IGNN P+YRV+E
Sbjct: 427 FITTREDLNKLRLSRYKMERFVNLPIFESTVLNCFVRISIGNNGQKPVYRVAE 479
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 23/30 (76%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMA 67
+IV EK RF+ P NYAMKKT LMKERD A
Sbjct: 569 KIVEEKNRFRNRPTNYAMKKTCLMKERDAA 598
>gi|327259531|ref|XP_003214590.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Anolis
carolinensis]
Length = 668
Score = 216 bits (549), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 99/180 (55%), Positives = 137/180 (76%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI+GV ET K+Y LG RTNKGL+LRHGN RVFRLEF+SNQEFTESEF++WK+ +
Sbjct: 360 VAEITGVVETAKVYQLGGARTNKGLQLRHGNDHRVFRLEFVSNQEFTESEFMKWKEAMFS 419
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
G+ LPT DE+ +K I+ + Y++ ++D+E+IV+EKERF+ P NYAMKKTQL+KE+
Sbjct: 420 AGMQLPTLDEINKKEVSIKEAINYKFNDQDIEEIVKEKERFRKAPSNYAMKKTQLLKEKA 479
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIMV 308
MA+ GD + A +Q ++++L+ERA LD+ RT IS+ISYIN RNR N+ E+EKA++
Sbjct: 480 MAEDMGDQDRAKQIQDQLNELDERAEALDRQRTKNISAISYINQRNREWNIVESEKALVA 539
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 38/48 (79%)
Query: 338 EELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
EELNR+RLSR K+E+ H+P F + V GCFVRIGIGN+ P+YRV+E
Sbjct: 315 EELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAE 362
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMAQ 68
+IV+EKERF+ P NYAMKKTQL+KE+ MA+
Sbjct: 452 EIVKEKERFRKAPSNYAMKKTQLLKEKAMAE 482
>gi|195488667|ref|XP_002092411.1| GE14177 [Drosophila yakuba]
gi|194178512|gb|EDW92123.1| GE14177 [Drosophila yakuba]
Length = 776
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 106/179 (59%), Positives = 138/179 (77%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI GV ETGKIYSLG TRTN+GL+L+HG ERVFRLEFISNQEFTE+EF +W + C
Sbjct: 478 VAEIVGVVETGKIYSLGTTRTNRGLRLKHGTQERVFRLEFISNQEFTENEFNKWNEVCQQ 537
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
V +P+ D + K +I+ + Y++K+EDV++IV EK RF+ P NYAMKKT LMKERD
Sbjct: 538 SHVQMPSIDLIAIKQNDIKKALNYEFKDEDVDKIVEEKNRFRNRPTNYAMKKTCLMKERD 597
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIM 307
A +GD + A L ++ID+LE RA+ELDK R+ T++ ISYIN+RNR+KNVE+AEKAI+
Sbjct: 598 AAMLRGDYDIAQDLGQQIDELENRASELDKRRSHTLNLISYINDRNRKKNVEDAEKAIL 656
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 43/53 (81%)
Query: 333 YIETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
+I T+E+LN++RLSR+KME+ V+LPIF V+ CFVRI IGNN P+YRV+E
Sbjct: 428 FITTREDLNKLRLSRYKMERFVNLPIFESTVLNCFVRISIGNNGQKPVYRVAE 480
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 23/30 (76%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMA 67
+IV EK RF+ P NYAMKKT LMKERD A
Sbjct: 570 KIVEEKNRFRNRPTNYAMKKTCLMKERDAA 599
>gi|194882181|ref|XP_001975191.1| GG22183 [Drosophila erecta]
gi|190658378|gb|EDV55591.1| GG22183 [Drosophila erecta]
Length = 776
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 106/179 (59%), Positives = 138/179 (77%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI GV ETGKIYSLG TRTN+GL+L+HG ERVFRLEFISNQEFTE+EF +W + C
Sbjct: 478 VAEIVGVVETGKIYSLGTTRTNRGLRLKHGTQERVFRLEFISNQEFTENEFNKWNEVCQQ 537
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
V +P+ D + K +I+ + Y++K+EDV++IV EK RF+ P NYAMKKT LMKERD
Sbjct: 538 SHVQMPSIDLIAIKQNDIKKALNYEFKDEDVDKIVEEKNRFRNRPTNYAMKKTCLMKERD 597
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIM 307
A +GD + A L ++ID+LE RA+ELDK R+ T++ ISYIN+RNR+KNVE+AEKAI+
Sbjct: 598 AAMLRGDYDIAQDLGQQIDELENRASELDKRRSHTLNLISYINDRNRKKNVEDAEKAIL 656
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 43/53 (81%)
Query: 333 YIETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
+I T+E+LN++RLSR+KME+ V+LPIF V+ CFVRI IGNN P+YRV+E
Sbjct: 428 FITTREDLNKLRLSRYKMERFVNLPIFESTVLNCFVRISIGNNGQKPVYRVAE 480
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 23/30 (76%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMA 67
+IV EK RF+ P NYAMKKT LMKERD A
Sbjct: 570 KIVEEKNRFRNRPTNYAMKKTCLMKERDAA 599
>gi|195122196|ref|XP_002005598.1| GI20555 [Drosophila mojavensis]
gi|193910666|gb|EDW09533.1| GI20555 [Drosophila mojavensis]
Length = 777
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 105/179 (58%), Positives = 140/179 (78%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI GV ETGKIY+LG TRTN+GL+L+HG ERVFRLEFISNQEFTE+EF +W + C
Sbjct: 480 VAEIVGVVETGKIYTLGTTRTNRGLRLKHGTQERVFRLEFISNQEFTETEFNKWYEVCQQ 539
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
+ V +PT D +E K +I+ + Y++K+EDV++IV EK RF+ P NYAMKKT LMKERD
Sbjct: 540 QHVPMPTMDLIEIKQNDIKKALNYEFKDEDVDKIVEEKNRFRNRPTNYAMKKTCLMKERD 599
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIM 307
A +GD + A+ L ++ID LE RA+ELDK R+ +++ ISYIN+RNR++NV++AEKAIM
Sbjct: 600 AAMLRGDYDIANELGQQIDQLESRASELDKRRSHSLNLISYINDRNRKRNVQDAEKAIM 658
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 43/53 (81%)
Query: 333 YIETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
+I T+E+LN++RLSRFKME+ V+LPIF V+ CFVRI IGNN P+YRV+E
Sbjct: 430 FITTREDLNKLRLSRFKMERFVNLPIFECTVVNCFVRISIGNNGQKPVYRVAE 482
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 23/30 (76%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMA 67
+IV EK RF+ P NYAMKKT LMKERD A
Sbjct: 572 KIVEEKNRFRNRPTNYAMKKTCLMKERDAA 601
>gi|195426288|ref|XP_002061271.1| GK20812 [Drosophila willistoni]
gi|194157356|gb|EDW72257.1| GK20812 [Drosophila willistoni]
Length = 831
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 107/179 (59%), Positives = 137/179 (76%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI GV ETGKIY+LG TRTN+GL+L+HG SERVFRLEFISNQEFTESEF +W + C
Sbjct: 519 VAEIVGVVETGKIYTLGTTRTNRGLRLKHGTSERVFRLEFISNQEFTESEFNKWSEVCQQ 578
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
V +PT D +E K +I+ + Y++K+EDV++IV EK RF+ P NYAM+KT LMKERD
Sbjct: 579 SHVQMPTIDLIEIKQGDIRKALNYEYKDEDVDKIVEEKNRFRNRPTNYAMRKTCLMKERD 638
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIM 307
A +G+ A L +ID LE RA+ELDK R+ T++ ISYIN+RNR++NVE+AEKAIM
Sbjct: 639 AAMLRGEYNLAQDLGTQIDQLESRASELDKRRSHTLNLISYINDRNRKRNVEDAEKAIM 697
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 41/53 (77%)
Query: 333 YIETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
+I T+E+LN++RLSR KME+ V+LPIF V+ CFVRI IGNN +YRV+E
Sbjct: 469 FITTREDLNKLRLSRHKMERFVNLPIFEATVMNCFVRISIGNNDQKAVYRVAE 521
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 23/30 (76%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMA 67
+IV EK RF+ P NYAM+KT LMKERD A
Sbjct: 611 KIVEEKNRFRNRPTNYAMRKTCLMKERDAA 640
>gi|195384395|ref|XP_002050903.1| GJ22408 [Drosophila virilis]
gi|194145700|gb|EDW62096.1| GJ22408 [Drosophila virilis]
Length = 778
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 105/179 (58%), Positives = 141/179 (78%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI GV ETGKIY+LG TRTN+GL+L+HG ERVFRLEFISNQEFTE+EF +W + C
Sbjct: 481 VAEIVGVVETGKIYTLGTTRTNRGLRLKHGTQERVFRLEFISNQEFTETEFNKWVEICQQ 540
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
+ V +PT D +E K+ +I+ + Y++K+EDV++IV EK RF+ P NYAMKKT LMKERD
Sbjct: 541 QHVPMPTIDLIEIKANDIKKALNYEFKDEDVDKIVEEKNRFRNRPTNYAMKKTCLMKERD 600
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIM 307
A +GD + A+ L ++ID LE RA+ELDK R+ +++ ISYIN+RNR++NV++AEKAIM
Sbjct: 601 AAMLRGDYDIANDLGQQIDQLESRASELDKRRSHSLNLISYINDRNRKRNVQDAEKAIM 659
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 43/53 (81%)
Query: 333 YIETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
+I T+E+LN++RLSRFKME+ V+LPIF V+ CFVRI IGNN P+YRV+E
Sbjct: 431 FITTREDLNKLRLSRFKMERFVNLPIFESTVVNCFVRISIGNNGQKPVYRVAE 483
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 23/30 (76%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMA 67
+IV EK RF+ P NYAMKKT LMKERD A
Sbjct: 573 KIVEEKNRFRNRPTNYAMKKTCLMKERDAA 602
>gi|194754930|ref|XP_001959745.1| GF11885 [Drosophila ananassae]
gi|190621043|gb|EDV36567.1| GF11885 [Drosophila ananassae]
Length = 781
Score = 214 bits (544), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 105/179 (58%), Positives = 141/179 (78%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI GV ETGKIY+LG TRTN+GL+L++G+ ERVFRLEFISNQEFTE+EF +W + C
Sbjct: 482 VAEIVGVVETGKIYNLGTTRTNRGLRLKYGSHERVFRLEFISNQEFTENEFNKWVEMCKE 541
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
V +P+ D +E K+ +I+ + Y++K+EDV++IV EK RF+ P NYAMKKT LMKERD
Sbjct: 542 SQVQMPSMDLIEIKANDIKKALNYEFKDEDVDKIVEEKNRFRNRPTNYAMKKTCLMKERD 601
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIM 307
A +GD + A L ++ID+LE RA+ELDK R+ T++ ISYIN+RNR+KNV++AEKAIM
Sbjct: 602 AAMLRGDYDIAQDLGQQIDELESRASELDKRRSHTLNLISYINDRNRKKNVQDAEKAIM 660
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 43/53 (81%)
Query: 333 YIETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
+I T+++LN++RLSR+KME+ V+LPIF V+ CFVRI IGNN P+YRV+E
Sbjct: 432 FISTRDDLNKLRLSRYKMERFVNLPIFEATVLNCFVRISIGNNGQKPVYRVAE 484
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 23/30 (76%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMA 67
+IV EK RF+ P NYAMKKT LMKERD A
Sbjct: 574 KIVEEKNRFRNRPTNYAMKKTCLMKERDAA 603
>gi|195154437|ref|XP_002018128.1| GL17538 [Drosophila persimilis]
gi|194113924|gb|EDW35967.1| GL17538 [Drosophila persimilis]
Length = 764
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 104/179 (58%), Positives = 140/179 (78%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ +I+GV ETGKIYSLG TRTN+GL+L+HG ERVFRLEFI NQEFTE+EF +W + C
Sbjct: 467 VADITGVVETGKIYSLGTTRTNRGLRLKHGTQERVFRLEFIYNQEFTENEFQKWHEVCQH 526
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
V +P+ + +E K+ +I+ + Y++K+EDV++IV EK RF+ P NYAMKKT LMKERD
Sbjct: 527 AHVQMPSIELIEIKANDIKKALNYEFKDEDVDKIVEEKNRFRNRPTNYAMKKTCLMKERD 586
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIM 307
A +GD + A L ++ID+LE RA+ELDK R+ T++ ISYIN+RNR+KNV++AEKAIM
Sbjct: 587 AAMLRGDYDIAQDLSQQIDELENRASELDKRRSHTLNLISYINDRNRKKNVQDAEKAIM 645
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 41/53 (77%)
Query: 333 YIETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
+I +E+LN++RLSR KME+ V+LPIF V+ CFVRI IGNN P+YRV++
Sbjct: 417 FISNREDLNKLRLSRHKMERFVNLPIFESTVLNCFVRIIIGNNGQKPVYRVAD 469
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 23/30 (76%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMA 67
+IV EK RF+ P NYAMKKT LMKERD A
Sbjct: 559 KIVEEKNRFRNRPTNYAMKKTCLMKERDAA 588
>gi|443695735|gb|ELT96585.1| hypothetical protein CAPTEDRAFT_18025 [Capitella teleta]
Length = 694
Score = 211 bits (537), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 100/178 (56%), Positives = 136/178 (76%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI GV ET KIY LG TRTNKGL+LRH SERV+RLEF+SN +FTE+EF++W++ M
Sbjct: 386 VAEIIGVVETAKIYQLGTTRTNKGLRLRHAGSERVYRLEFVSNHDFTETEFLKWRETMMI 445
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
G L T E+E K KE+++ M Y++KEED+++IV K RFK P+NYAMKKT L+K+++
Sbjct: 446 GGFTLVTVAEIEAKVKEVKDAMTYKYKEEDIDRIVESKNRFKKNPHNYAMKKTDLLKQKE 505
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAI 306
MA+ GD E+ + + +++LEERA ELDK RTS ISS+SYIN RNR++N EAE+A+
Sbjct: 506 MAEISGDTEKLQEVTQILEELEERATELDKRRTSNISSVSYINQRNRQRNTVEAEEAM 563
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 46/57 (80%)
Query: 329 KVIEYIETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
K +E++E KE+L ++R+SR KME+ H+P F ++V+GC+VRIGIGN+ G +YRV+E
Sbjct: 332 KRVEFVENKEQLAKLRISRHKMERWCHMPFFDRLVVGCYVRIGIGNHNGRSVYRVAE 388
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 25/31 (80%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMAQ 68
+IV K RFK P+NYAMKKT L+K+++MA+
Sbjct: 478 RIVESKNRFKKNPHNYAMKKTDLLKQKEMAE 508
>gi|47221320|emb|CAG13256.1| unnamed protein product [Tetraodon nigroviridis]
Length = 675
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 96/180 (53%), Positives = 134/180 (74%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI V ET K+Y LG TRTNKGL+LRHG RVFRLEF+SNQEF ESEFI+WK+ M
Sbjct: 366 VAEIVDVVETAKVYQLGSTRTNKGLQLRHGADTRVFRLEFVSNQEFAESEFIKWKEAMMV 425
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
G+ +PT DE+ +K + I+ + Y++ ++D+E IV+EK+RF+ P NYAMKKTQL+K++
Sbjct: 426 AGMQVPTLDEITKKEQTIKEALNYKFNDKDIEDIVKEKDRFRKAPPNYAMKKTQLLKDKA 485
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIMV 308
MA+ GD + ++Q ++++LEERA LD+ RT IS+ISYIN RNR N+ E+EKA++
Sbjct: 486 MAEESGDGDRVKVIQDELNELEERAEALDRQRTKNISAISYINQRNRSWNIVESEKALVA 545
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 39/48 (81%)
Query: 338 EELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
EELNRIRLSR K+E+ H+P F + V GCFVRIGIGN++ P+YRV+E
Sbjct: 321 EELNRIRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNSSSKPVYRVAE 368
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 26/30 (86%)
Query: 39 IVREKERFKPTPYNYAMKKTQLMKERDMAQ 68
IV+EK+RF+ P NYAMKKTQL+K++ MA+
Sbjct: 459 IVKEKDRFRKAPPNYAMKKTQLLKDKAMAE 488
>gi|348515979|ref|XP_003445517.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog
[Oreochromis niloticus]
Length = 677
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 96/180 (53%), Positives = 135/180 (75%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI V ET K+Y LG TRTNKGL+LRHG RVFRLEF+SNQEFTESEF++WK+ +
Sbjct: 366 VAEIVDVVETAKVYQLGSTRTNKGLQLRHGGDTRVFRLEFVSNQEFTESEFMKWKEAMIA 425
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
G+ +PT DE+ +K + I+ + Y++ ++D+E IV+EK+RF+ P NYAMKKTQL+K++
Sbjct: 426 AGMQVPTLDEITKKEQSIKEALNYKFNDKDIEDIVKEKDRFRKAPPNYAMKKTQLLKDKA 485
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIMV 308
MA+ GD E ++Q ++++LEERA LD+ RT IS+ISYIN RNR N+ E+EKA++
Sbjct: 486 MAEESGDGERVKVIQDELNELEERAEALDRQRTKNISAISYINQRNRSWNIVESEKALVA 545
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 39/48 (81%)
Query: 338 EELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
+ELNRIRLSR K+E+ H+P F + V GCFVRIGIGN++ P+YRV+E
Sbjct: 321 DELNRIRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNSSSKPVYRVAE 368
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 26/30 (86%)
Query: 39 IVREKERFKPTPYNYAMKKTQLMKERDMAQ 68
IV+EK+RF+ P NYAMKKTQL+K++ MA+
Sbjct: 459 IVKEKDRFRKAPPNYAMKKTQLLKDKAMAE 488
>gi|432936476|ref|XP_004082134.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Oryzias
latipes]
Length = 673
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 96/180 (53%), Positives = 136/180 (75%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI V ET K+Y LG TRTNKGL+LRHG RVFRLEF+SNQEFTESEF++WK+ +
Sbjct: 362 VAEIVDVVETAKVYQLGSTRTNKGLQLRHGADTRVFRLEFVSNQEFTESEFMKWKEAMII 421
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
G+ +PT DE+ +K + I+ + Y++ ++D+E IV+EK+RF+ P NYAMKKTQL+K++
Sbjct: 422 AGMQVPTLDEITKKEQSIKEAVNYKFNDKDIEDIVKEKDRFRRAPPNYAMKKTQLLKDKA 481
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIMV 308
MA+ GD E+ ++Q ++++LEERA LD+ RT IS+ISYIN RNR N+ E+EKA++
Sbjct: 482 MAEENGDGEKVKVIQDELNELEERAEALDRQRTKNISAISYINQRNRSWNIVESEKALVA 541
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 39/48 (81%)
Query: 338 EELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
EELNRIRLSR K+E+ H+P F + V GCFVRIGIGN++ P+YRV+E
Sbjct: 317 EELNRIRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNSSSKPVYRVAE 364
Score = 44.7 bits (104), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 26/30 (86%)
Query: 39 IVREKERFKPTPYNYAMKKTQLMKERDMAQ 68
IV+EK+RF+ P NYAMKKTQL+K++ MA+
Sbjct: 455 IVKEKDRFRRAPPNYAMKKTQLLKDKAMAE 484
>gi|410897823|ref|XP_003962398.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Takifugu
rubripes]
Length = 675
Score = 207 bits (527), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 95/180 (52%), Positives = 133/180 (73%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI V ET K+Y LG TRTNKGL+LRHG RVFRLEF+SNQEF ESEFI+WK+ M
Sbjct: 366 VAEIVDVVETAKVYQLGSTRTNKGLQLRHGGDTRVFRLEFVSNQEFAESEFIKWKEAMMV 425
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
+ +PT DE+ +K + I+ + Y++ ++D+E IV+EK+RF+ P NYAMKKTQL+K++
Sbjct: 426 ASMQVPTLDEITKKEQTIKEALNYKFNDKDIEDIVKEKDRFRKAPPNYAMKKTQLLKDKA 485
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIMV 308
MA+ GD + ++Q ++++LEERA LD+ RT IS+ISYIN RNR N+ E+EKA++
Sbjct: 486 MAEESGDGDRVKVIQDELNELEERAEALDRQRTKNISAISYINQRNRSWNIVESEKALVA 545
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 39/48 (81%)
Query: 338 EELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
EELNRIRLSR K+E+ H+P F + V GCFVRIGIGN++ P+YRV+E
Sbjct: 321 EELNRIRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNSSSKPVYRVAE 368
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 26/30 (86%)
Query: 39 IVREKERFKPTPYNYAMKKTQLMKERDMAQ 68
IV+EK+RF+ P NYAMKKTQL+K++ MA+
Sbjct: 459 IVKEKDRFRKAPPNYAMKKTQLLKDKAMAE 488
>gi|395527813|ref|XP_003766032.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog
[Sarcophilus harrisii]
Length = 713
Score = 204 bits (520), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 96/188 (51%), Positives = 142/188 (75%), Gaps = 1/188 (0%)
Query: 122 FSSHP-QEIGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFI 180
++S P ++ EI+ V ET K+Y LG TRTNKGL+LR+GN + VFRLEF+SNQEFT+SEF+
Sbjct: 397 YNSKPVYQVAEITSVVETAKVYQLGGTRTNKGLQLRYGNDQLVFRLEFVSNQEFTKSEFM 456
Query: 181 RWKDQCMTEGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKK 240
+WK+ + G+ LPT DE+ +K I+ + Y++ ++D+E+IV+EKERF+ P NYAMKK
Sbjct: 457 KWKEVMFSAGMQLPTLDEINKKEVSIKEALNYKFNDQDIEKIVKEKERFRKAPPNYAMKK 516
Query: 241 TQLMKERDMAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVE 300
QL+KE+ MA+ GD ++A +Q ++++LEERA LD+ RT IS+I+YIN RNR N+
Sbjct: 517 MQLLKEKAMAEDVGDQDKAKQIQHQLNELEERAEALDRQRTKNISAINYINQRNREWNIV 576
Query: 301 EAEKAIMV 308
E++KA++
Sbjct: 577 ESQKALVA 584
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 38/48 (79%)
Query: 338 EELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
E+LNR+RLSR K+E+ H+P F + VIGCFVRIGIGN P+Y+V+E
Sbjct: 360 EDLNRVRLSRHKLERWCHMPFFAKTVIGCFVRIGIGNYNSKPVYQVAE 407
Score = 45.1 bits (105), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 26/31 (83%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMAQ 68
+IV+EKERF+ P NYAMKK QL+KE+ MA+
Sbjct: 497 KIVKEKERFRKAPPNYAMKKMQLLKEKAMAE 527
>gi|357604856|gb|EHJ64361.1| hypothetical protein KGM_10227 [Danaus plexippus]
Length = 612
Score = 204 bits (518), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 114/222 (51%), Positives = 138/222 (62%), Gaps = 43/222 (19%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRW------ 182
+ EI V ET K+Y+LG TRTNKG KLRHG +RVFRLEF+SNQEFTE+EF +W
Sbjct: 258 VAEIIDVYETAKVYNLGNTRTNKGFKLRHGTQDRVFRLEFVSNQEFTENEFQKWHRAIKE 317
Query: 183 ------------------KDQCMTE-------------------GVALPTKDEVERKSKE 205
KD M E PT D V K E
Sbjct: 318 ANKKPPTMDFVRNKILEVKDALMYEFKEFTENEFQKWHRAIKEANKKPPTMDFVRNKILE 377
Query: 206 IQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERDMAQSKGDDEEASILQRK 265
+++ +MY++KEED+E+IV EKERF+ P NYAMKKTQLMKERD+AQ +GD+E L K
Sbjct: 378 VKDALMYEFKEEDIEKIVAEKERFRSHPTNYAMKKTQLMKERDVAQLRGDEELVLELNSK 437
Query: 266 IDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIM 307
+ +LEERA+ LDK RTS+I SISYINNRNR+ NVE AEKAIM
Sbjct: 438 LQELEERASALDKTRTSSIQSISYINNRNRKLNVETAEKAIM 479
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 35/53 (66%), Positives = 47/53 (88%)
Query: 333 YIETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
Y +T+E++N++RLSRFK+E+LVHLP F ++V GCFVRIGIGNN G P+YRV+E
Sbjct: 208 YADTREQINKLRLSRFKLERLVHLPFFSRVVSGCFVRIGIGNNNGNPVYRVAE 260
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/31 (77%), Positives = 27/31 (87%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMAQ 68
+IV EKERF+ P NYAMKKTQLMKERD+AQ
Sbjct: 393 KIVAEKERFRSHPTNYAMKKTQLMKERDVAQ 423
>gi|156392668|ref|XP_001636170.1| predicted protein [Nematostella vectensis]
gi|156223270|gb|EDO44107.1| predicted protein [Nematostella vectensis]
Length = 532
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 91/171 (53%), Positives = 133/171 (77%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI V ET K+YSLG T+TNKGLKLRHG ERVFRLEF+SNQ +E+EF RWK++C
Sbjct: 228 VAEIKDVVETAKVYSLGATKTNKGLKLRHGPQERVFRLEFVSNQRISETEFQRWKEECEA 287
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
G+ LPT D+VE+K K+I+ + + EED+E+IV EK++F+ TP+NYA+KK +L++ ++
Sbjct: 288 HGIPLPTLDDVEKKVKDIEEAKNHAYNEEDIEKIVSEKQKFRKTPFNYAIKKNELIRRKE 347
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNV 299
+A++ G+ EEA ++ ++D+LEERA LDK R+ +S+ISYIN RNR++N+
Sbjct: 348 IAETSGNHEEAEKIRSELDNLEERAQVLDKQRSRGLSAISYINERNRKRNI 398
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 39/48 (81%)
Query: 338 EELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
++L RIRLSR KME+ VH+P F + + GCFVRIGIGN+ G P+YRV+E
Sbjct: 183 DDLERIRLSRHKMERWVHMPFFAKTLAGCFVRIGIGNHDGRPVYRVAE 230
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 28/32 (87%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMAQS 69
+IV EK++F+ TP+NYA+KK +L++ +++A++
Sbjct: 320 KIVSEKQKFRKTPFNYAIKKNELIRRKEIAET 351
>gi|351707409|gb|EHB10328.1| RNA polymerase-associated protein RTF1-like protein [Heterocephalus
glaber]
Length = 704
Score = 200 bits (509), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 100/212 (47%), Positives = 140/212 (66%), Gaps = 32/212 (15%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI+GV ET K+Y LG TRTNKGL+LRHG+ +RVFRLEF+SNQEFTESEF++WK+ +
Sbjct: 362 VAEITGVVETAKVYQLGGTRTNKGLQLRHGSDQRVFRLEFVSNQEFTESEFMKWKEAMFS 421
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKER- 247
G+ LPT DE+ +K I+ + Y++ ++D+E+IV+EKERF+ P NYAMKKTQL+KE+
Sbjct: 422 AGMQLPTLDEINKKELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKF 481
Query: 248 -------------------------------DMAQSKGDDEEASILQRKIDDLEERANEL 276
MA+ GD ++A +Q ++++LEERA L
Sbjct: 482 RACHMRYLACARLRGLGCRTSCGRSSRISVQAMAEDLGDQDKAKQIQDQLNELEERAEAL 541
Query: 277 DKARTSTISSISYINNRNRRKNVEEAEKAIMV 308
D+ RT IS+ISYIN RNR N+ E+EKA++
Sbjct: 542 DRQRTKNISAISYINQRNREWNIVESEKALVA 573
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 38/48 (79%)
Query: 338 EELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
EELNR+RLSR K+E+ H+P F + V GCFVRIGIGN+ P+YRV+E
Sbjct: 317 EELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAE 364
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/27 (70%), Positives = 24/27 (88%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKER 64
+IV+EKERF+ P NYAMKKTQL+KE+
Sbjct: 454 EIVKEKERFRKAPPNYAMKKTQLLKEK 480
>gi|312382127|gb|EFR27686.1| hypothetical protein AND_05286 [Anopheles darlingi]
Length = 457
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 99/179 (55%), Positives = 137/179 (76%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI GV ET KIY G++RTNKG KL+HG+ ERVFRLEF+SNQ+F+++E+ +W C
Sbjct: 178 VAEIVGVVETAKIYQFGRSRTNKGFKLKHGSQERVFRLEFVSNQDFSDTEYQKWLTVCEA 237
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
G LPT D +ERK ++++ Y++K+ D+++++ EK RF+ P NYAMKKT LMKERD
Sbjct: 238 TGTPLPTVDMIERKQRDVKEASQYEFKDADIDRLIEEKNRFRAHPTNYAMKKTILMKERD 297
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIM 307
AQ +GDD+ A L +I ++EERA+ LDK R+S+IS ISYIN+RNR++NVE+AEKAIM
Sbjct: 298 AAQLRGDDDIARDLSSQIQEIEERASTLDKKRSSSISLISYINDRNRKRNVEDAEKAIM 356
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 40/52 (76%)
Query: 334 IETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
I T ELN++R+SR K+E+ ++LPIF V+ CFVRI IGNN G P+YRV+E
Sbjct: 129 ISTNAELNKLRISRHKLERFINLPIFEPTVMNCFVRINIGNNQGKPVYRVAE 180
Score = 44.7 bits (104), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMAQSKIGESQPFRDGNLSS 84
+++ EK RF+ P NYAMKKT LMKERD AQ + G+ RD LSS
Sbjct: 270 RLIEEKNRFRAHPTNYAMKKTILMKERDAAQLR-GDDDIARD--LSS 313
>gi|157272120|ref|XP_001648109.1| hypothetical protein AaeL_AAEL003976 [Aedes aegypti]
gi|108880464|gb|EAT44689.1| AAEL003976-PA [Aedes aegypti]
Length = 787
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 103/178 (57%), Positives = 136/178 (76%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI GV ET KIY GK RTNKG +L+HG+ ERVFRLEFISNQ+FT+SE+ +W C
Sbjct: 493 VAEIVGVVETAKIYQFGKCRTNKGFRLKHGSQERVFRLEFISNQDFTDSEYQKWLSVCEA 552
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
G ALP D +E+K +EI+ + Y++K+ D+++++ EK RF+ P NYAMKKT LMKERD
Sbjct: 553 TGTALPYVDVIEKKQREIKEAIQYEFKDADIDKLIEEKNRFRAHPTNYAMKKTLLMKERD 612
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAI 306
AQ +G+DE A L +I +LEERA+ LDK R+S+IS ISYIN+RNR++NVE+AEKAI
Sbjct: 613 AAQLRGEDELARDLNTQIMELEERASTLDKKRSSSISLISYINDRNRKRNVEDAEKAI 670
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 42/52 (80%)
Query: 334 IETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
I KEELN++R+SR K+E+ + LP+F QIV+ CFVRI IGNN G P+YRV+E
Sbjct: 444 ISNKEELNKLRISRHKIERFIALPMFDQIVLNCFVRINIGNNNGRPVYRVAE 495
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMAQSKIGESQPFRDGN 81
+++ EK RF+ P NYAMKKT LMKERD AQ + GE + RD N
Sbjct: 585 KLIEEKNRFRAHPTNYAMKKTLLMKERDAAQLR-GEDELARDLN 627
>gi|170040269|ref|XP_001847927.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167863854|gb|EDS27237.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 811
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 102/179 (56%), Positives = 136/179 (75%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI GV ET KIY G+ RTNKG KL+HG+ ERVFRLEFISNQ+FT+SE+ +W C
Sbjct: 517 VAEIVGVVETAKIYQFGRGRTNKGFKLKHGSQERVFRLEFISNQDFTDSEYQKWLSVCEA 576
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
G +P D ++RK+ EI+ + Y++K+ D+++I+ EK RF+ P NYAMKKT LMKERD
Sbjct: 577 TGTPMPCVDIIDRKASEIKEAIQYEFKDADIDKIIEEKNRFRAHPTNYAMKKTLLMKERD 636
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIM 307
AQ +G+D+ A L +I +LEERA+ LDK R+S+IS ISYIN+RNR++NVE+AEKAIM
Sbjct: 637 AAQLRGEDDLARDLNTQIQELEERASHLDKRRSSSISLISYINDRNRKRNVEDAEKAIM 695
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 43/55 (78%)
Query: 331 IEYIETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
+ I T++ELN++RLSR K+E+ + LP+F IV+ CFVRI IGNN G P+YRV+E
Sbjct: 465 VTAISTRDELNKLRLSRHKIERFIALPMFDTIVLNCFVRINIGNNNGRPVYRVAE 519
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMAQSKIGESQPFRDGN 81
+I+ EK RF+ P NYAMKKT LMKERD AQ + GE RD N
Sbjct: 609 KIIEEKNRFRAHPTNYAMKKTLLMKERDAAQLR-GEDDLARDLN 651
>gi|158300586|ref|XP_320467.4| AGAP012057-PA [Anopheles gambiae str. PEST]
gi|157013231|gb|EAA00301.5| AGAP012057-PA [Anopheles gambiae str. PEST]
Length = 808
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 100/179 (55%), Positives = 137/179 (76%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI GV ET KIY G++RTNKG KL+HG+ ERVFRLEF+SNQ+F+++E+ +W C
Sbjct: 511 VAEIVGVVETAKIYQFGRSRTNKGFKLKHGSQERVFRLEFVSNQDFSDTEYQKWLTVCEA 570
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
G LPT D +ERK ++I+ Y++K+ D++++V EK RF+ P NYAMKKT LMKERD
Sbjct: 571 TGTPLPTVDMIERKQRDIKEASQYEFKDADIDRLVEEKNRFRAHPTNYAMKKTILMKERD 630
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIM 307
AQ +G+D+ A L +I ++EERA+ LDK R+S+IS ISYIN+RNR++NVE+AEKAIM
Sbjct: 631 AAQLRGEDDLARELNSQIQEIEERASTLDKKRSSSISLISYINDRNRKRNVEDAEKAIM 689
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 40/52 (76%)
Query: 334 IETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
I + ELN++R+SR K+E+ ++LPIF V+ CFVRI IGNN G P+YRV+E
Sbjct: 462 ISSNAELNKLRISRHKLERFINLPIFEPTVMNCFVRINIGNNQGKPVYRVAE 513
Score = 44.7 bits (104), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 24/31 (77%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMAQ 68
++V EK RF+ P NYAMKKT LMKERD AQ
Sbjct: 603 RLVEEKNRFRAHPTNYAMKKTILMKERDAAQ 633
>gi|405973004|gb|EKC37744.1| RNA polymerase-associated protein RTF1-like protein [Crassostrea
gigas]
Length = 673
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 97/201 (48%), Positives = 143/201 (71%), Gaps = 4/201 (1%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
I EI ET KIY LG TRTNKGLKL+HG+SERV+RLEF+SNQ+FT+SEF +W++
Sbjct: 338 IAEIIDTVETAKIYQLGTTRTNKGLKLKHGHSERVYRLEFVSNQDFTDSEFFKWREAMTL 397
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
++LPT ++++K++ IQ+ + Y++KE D+E+IV EK++FK P+NYA+KKT L+K+++
Sbjct: 398 GDLSLPTVQDIDKKARSIQDALNYKFKENDIEEIVAEKQKFKKNPHNYAIKKTFLLKQKE 457
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKN---VEEAEKA 305
+A +GD + +++++LEERANELD+ RT+ ISSISYIN RNR +N EEA K
Sbjct: 458 VADLEGDTAAQYKISQELEELEERANELDRRRTNNISSISYINQRNRLRNQILAEEASKK 517
Query: 306 IMVSC-CCCCSGFSYRSVKSS 325
+ F+ RS + +
Sbjct: 518 EFLEMKNAVADPFTRRSCRPT 538
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 26/35 (74%)
Query: 351 EKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
E+ H+P F + V GC+VRIGIGN+ G +YR++E
Sbjct: 306 EEWCHMPFFKKTVCGCYVRIGIGNHEGRAVYRIAE 340
Score = 38.9 bits (89), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 26/30 (86%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMA 67
+IV EK++FK P+NYA+KKT L+K++++A
Sbjct: 430 EIVAEKQKFKKNPHNYAIKKTFLLKQKEVA 459
>gi|321470499|gb|EFX81475.1| hypothetical protein DAPPUDRAFT_303485 [Daphnia pulex]
Length = 722
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 98/180 (54%), Positives = 142/180 (78%), Gaps = 1/180 (0%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
I EI VCETGKIY LG T+TNKG++L+HG ERVFR+EF+SNQ+F++SEF +W D C
Sbjct: 414 IAEIIDVCETGKIYQLGSTKTNKGIRLKHGAQERVFRIEFVSNQDFSDSEFKKWLDDCNV 473
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
+G + PT +++E+K K+I+ +++ EED+ Q++ EK RF+ TPYNYAM+K QLMKERD
Sbjct: 474 QGTSPPTLEDIEKKLKDIKEAANFEFNEEDINQMLEEKGRFRKTPYNYAMRKNQLMKERD 533
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDK-ARTSTISSISYINNRNRRKNVEEAEKAIM 307
+A KG++EE + +++ +LEERA+EL K + ++T+SSIS+IN RNR++NVE AE+AI+
Sbjct: 534 VALLKGEEEETERITKELAELEERADELSKRSLSTTLSSISFINERNRKRNVERAEEAIL 593
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 41/53 (77%)
Query: 333 YIETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
++E+KE+L RIRLSR ++EK VH P + ++GCFVR+GIG N G +YR++E
Sbjct: 364 FVESKEQLGRIRLSRHRLEKWVHAPFLKRAIVGCFVRVGIGMNNGRSVYRIAE 416
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 26/30 (86%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMA 67
Q++ EK RF+ TPYNYAM+K QLMKERD+A
Sbjct: 506 QMLEEKGRFRKTPYNYAMRKNQLMKERDVA 535
>gi|198432578|ref|XP_002121462.1| PREDICTED: similar to mCG9728 [Ciona intestinalis]
Length = 648
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 91/176 (51%), Positives = 126/176 (71%), Gaps = 2/176 (1%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
I EI V ET K+Y LGKTRTNKGL+LRHG ERVFRLEF+SN EFT+SEF +WK+ M
Sbjct: 346 IAEILDVVETAKVYQLGKTRTNKGLRLRHGQQERVFRLEFVSNSEFTDSEFFKWKEAVML 405
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
G+ LPT DE+ +K +Q + Y K++D++ I++EK +F+ P+NYAMKKT L+K+++
Sbjct: 406 AGLELPTLDEIHKKQSAMQKAIQYNIKDKDIDHIIKEKTKFRKNPFNYAMKKTTLLKQKE 465
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNV--EEA 302
MA+ +GD +E + ++D+LEERA LDK R I+ I+YIN R + N+ EEA
Sbjct: 466 MAEVQGDGDETKRINSQLDELEERATHLDKQRQENIAGITYINERIKSHNLLKEEA 521
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 37/61 (60%), Positives = 47/61 (77%)
Query: 325 SASRKVIEYIETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVS 384
S++ K + I KE+L+ IRLSRFKMEK VHLP F + IGCFVRIGIGN+ G P+YR++
Sbjct: 288 SSNSKRFQPISAKEDLSIIRLSRFKMEKWVHLPFFRETCIGCFVRIGIGNHNGRPVYRIA 347
Query: 385 E 385
E
Sbjct: 348 E 348
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 26/31 (83%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMAQ 68
I++EK +F+ P+NYAMKKT L+K+++MA+
Sbjct: 438 HIIKEKTKFRKNPFNYAMKKTTLLKQKEMAE 468
>gi|72010089|ref|XP_786848.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog
[Strongylocentrotus purpuratus]
Length = 690
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 94/178 (52%), Positives = 129/178 (72%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI V ET KIY LG TRTNKGLKL++ + ERVFRLEF+SNQ+F+E+EF RW + +
Sbjct: 373 VAEIIDVVETAKIYPLGATRTNKGLKLKYASQERVFRLEFVSNQDFSETEFKRWHEDMIN 432
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
LPT ++VE K I+ + Y++KEED+E+IV EKERF+ P NYAM KT+L K RD
Sbjct: 433 GDYDLPTINDVEHKEAIIKRALDYKYKEEDIEKIVHEKERFRKNPRNYAMTKTKLRKSRD 492
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAI 306
+A +G++E A L +K+ DLEERA ELD+ R +++I+YIN RNR +N+ E+E A+
Sbjct: 493 LALMEGNEETAKGLSQKLTDLEERAQELDRIRNREVNAITYINQRNRNRNIAESEVAM 550
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 36/53 (67%), Positives = 43/53 (81%)
Query: 333 YIETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
++ TKEELNRIRLSR K+EK VH+P F + IGCFVRIGIG N G P+YRV+E
Sbjct: 323 FVSTKEELNRIRLSRNKIEKWVHMPFFPRTTIGCFVRIGIGQNNGRPVYRVAE 375
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 23/30 (76%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMA 67
+IV EKERF+ P NYAM KT+L K RD+A
Sbjct: 465 KIVHEKERFRKNPRNYAMTKTKLRKSRDLA 494
>gi|391339871|ref|XP_003744270.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform 2
[Metaseiulus occidentalis]
Length = 653
Score = 187 bits (475), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 89/179 (49%), Positives = 130/179 (72%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
I EI V ET K+Y GK RTN+GLKL+HG ER++R+E++SNQEFTE+EF +W
Sbjct: 335 IAEILEVVETPKVYQCGKNRTNRGLKLKHGKEERIYRIEYVSNQEFTENEFQKWMAAMGV 394
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
+ + LPT +E+K K+++ + D++Q+V EK++FK P+NYAM KT++MK+++
Sbjct: 395 DNIGLPTVSFIEKKKKDLEAANNHSCSANDIQQMVDEKKKFKKNPHNYAMAKTEVMKKKE 454
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIM 307
MA+ +GD EEA ++D LE+RA ELDK RTSTIS+I+YIN RNR+KN+ + E+AI+
Sbjct: 455 MAEQQGDQEEARKWSEELDRLEDRAKELDKQRTSTISAIAYINERNRQKNIVDIERAIL 513
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 41/53 (77%)
Query: 333 YIETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
++ T+++L++IRLSRF++EK + +P F + V+GCFV+IG+G G YR++E
Sbjct: 285 HVNTRDQLSQIRLSRFRLEKWLFMPFFAKTVVGCFVKIGVGQMGGAQNYRIAE 337
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 27/31 (87%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMAQ 68
Q+V EK++FK P+NYAM KT++MK+++MA+
Sbjct: 427 QMVDEKKKFKKNPHNYAMAKTEVMKKKEMAE 457
>gi|391339869|ref|XP_003744269.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog isoform 1
[Metaseiulus occidentalis]
Length = 596
Score = 187 bits (474), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 89/179 (49%), Positives = 130/179 (72%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
I EI V ET K+Y GK RTN+GLKL+HG ER++R+E++SNQEFTE+EF +W
Sbjct: 278 IAEILEVVETPKVYQCGKNRTNRGLKLKHGKEERIYRIEYVSNQEFTENEFQKWMAAMGV 337
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
+ + LPT +E+K K+++ + D++Q+V EK++FK P+NYAM KT++MK+++
Sbjct: 338 DNIGLPTVSFIEKKKKDLEAANNHSCSANDIQQMVDEKKKFKKNPHNYAMAKTEVMKKKE 397
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIM 307
MA+ +GD EEA ++D LE+RA ELDK RTSTIS+I+YIN RNR+KN+ + E+AI+
Sbjct: 398 MAEQQGDQEEARKWSEELDRLEDRAKELDKQRTSTISAIAYINERNRQKNIVDIERAIL 456
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 41/53 (77%)
Query: 333 YIETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
++ T+++L++IRLSRF++EK + +P F + V+GCFV+IG+G G YR++E
Sbjct: 228 HVNTRDQLSQIRLSRFRLEKWLFMPFFAKTVVGCFVKIGVGQMGGAQNYRIAE 280
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 27/31 (87%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMAQ 68
Q+V EK++FK P+NYAM KT++MK+++MA+
Sbjct: 370 QMVDEKKKFKKNPHNYAMAKTEVMKKKEMAE 400
>gi|449668988|ref|XP_002159856.2| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Hydra
magnipapillata]
Length = 791
Score = 184 bits (467), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 93/195 (47%), Positives = 139/195 (71%), Gaps = 6/195 (3%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+GEI GV ET K+Y+LG TRTNKGLK+RHG E+VFR+E++SN +FTESEF++WK++
Sbjct: 342 VGEIIGVTETPKVYNLGSTRTNKGLKIRHGMQEKVFRMEYVSNSQFTESEFLKWKEEMSL 401
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
+ LPT ++RKS+EI Y +KE+DVE IV+EK RF+ P+NYA K L++E++
Sbjct: 402 VELPLPTVSHIKRKSEEIAESKGYSFKEDDVEAIVKEKNRFRKNPFNYASTKNTLIREKE 461
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIMV 308
+A+ G+ E + ++ K+++LEERA LD+ R+ ++++S+IN RNR+KNV +AEKA +V
Sbjct: 462 LAEQAGNTVELAKVKEKLEELEERAQMLDRKRSGALNNVSFINERNRKKNVYDAEKACVV 521
Query: 309 SCC------CCCSGF 317
+ C GF
Sbjct: 522 TKTHIPTPKASCVGF 536
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/52 (63%), Positives = 42/52 (80%)
Query: 334 IETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
I ++E+L IRLSRFK+EK VHLP F ++V GCFVR+GIGN+ G P+YRV E
Sbjct: 293 ISSREQLEIIRLSRFKLEKWVHLPFFPRVVTGCFVRMGIGNHDGKPVYRVGE 344
>gi|260788338|ref|XP_002589207.1| hypothetical protein BRAFLDRAFT_120771 [Branchiostoma floridae]
gi|229274382|gb|EEN45218.1| hypothetical protein BRAFLDRAFT_120771 [Branchiostoma floridae]
Length = 605
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 92/162 (56%), Positives = 125/162 (77%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
I EI V ET K+Y LG TRTNKGL+LRH ERVFRLEF+SNQ+FTESEF+RW+++ MT
Sbjct: 319 IAEIIDVVETAKVYQLGSTRTNKGLRLRHATDERVFRLEFVSNQDFTESEFLRWREEMMT 378
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
+G LP DEV+ K +IQ + Y +KE+D+E IV+EKERF+ +PYN+AMKKT LMKE++
Sbjct: 379 KGFQLPFMDEVDSKYNDIQRALKYDFKEDDIEAIVKEKERFQKSPYNFAMKKTALMKEKE 438
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYI 290
MA++ GD ++A +L K+++LEERA EL++ R IS+I +
Sbjct: 439 MAEATGDTDKAKVLTDKLEELEERAEELNRLRQKNISAIRLL 480
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 27/35 (77%)
Query: 351 EKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
E+ H+P F + V GC+VRIGIGN+ G P+YR++E
Sbjct: 287 EEWCHMPFFKKAVAGCYVRIGIGNHNGKPVYRIAE 321
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 29/31 (93%)
Query: 39 IVREKERFKPTPYNYAMKKTQLMKERDMAQS 69
IV+EKERF+ +PYN+AMKKT LMKE++MA++
Sbjct: 412 IVKEKERFQKSPYNFAMKKTALMKEKEMAEA 442
>gi|324504702|gb|ADY42028.1| RNA polymerase-associated protein RTF1 [Ascaris suum]
Length = 721
Score = 178 bits (451), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 85/167 (50%), Positives = 118/167 (70%)
Query: 130 GEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTE 189
++ V ET K+Y L TRTNKGLKL+HG ERV+RLEF+SN FTE EF++W+D T
Sbjct: 406 AQVLDVVETAKVYQLETTRTNKGLKLKHGKDERVYRLEFVSNSPFTEHEFMKWRDAMKTS 465
Query: 190 GVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERDM 249
+ L T D+VE+K +I+ + Y + +ED++ I++EK RFK P+NYA++K QLMK +
Sbjct: 466 KLPLITIDQVEKKEADIKKAVNYNYTDEDIDHIIKEKARFKKGPFNYAIEKGQLMKLKQE 525
Query: 250 AQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRR 296
A+ G EEA LQR+ID+LE RA ELD+ R+ +I IS+IN RNR+
Sbjct: 526 AEQYGRHEEAETLQRQIDELESRAAELDRRRSQSIRGISWINQRNRQ 572
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 339 ELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNT-GIPLYRVSE 385
++ RIRLSR+K+ K VH P F + V+GCFVRIGIG N G +YR ++
Sbjct: 360 DIQRIRLSRYKLAKFVHAPFFTKTVVGCFVRIGIGKNKEGRSVYRAAQ 407
>gi|340373171|ref|XP_003385115.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog
[Amphimedon queenslandica]
Length = 647
Score = 168 bits (425), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 91/176 (51%), Positives = 130/176 (73%)
Query: 131 EISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEG 190
EI V ET K+Y+LG T+TNKGLKLR G ER+FR+E+ISN FT+ EF +WK +
Sbjct: 326 EIVSVHETSKVYTLGGTKTNKGLKLRFGQQERIFRMEYISNSAFTDQEFSKWKAENEAHS 385
Query: 191 VALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERDMA 250
+ LPT EVE+K KEI+ KEED+++I++EK++F+ P+NYA+ K +LM+E+++A
Sbjct: 386 IKLPTLFEVEKKVKEIEKYKSASLKEEDIDRIIQEKQKFQKNPHNYALTKNRLMREKEIA 445
Query: 251 QSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAI 306
+ G E+A+ L RK+++LEERA ELDK RT +S+ISYIN RNR++NV AE+A+
Sbjct: 446 EQTGSTEKATDLARKLEELEERAEELDKQRTRGLSAISYINERNRQRNVARAEEAL 501
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 40/52 (76%)
Query: 334 IETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
I T EEL++I++SRF++EK VH+P F ++ GC+VRIGIG + G +YRV E
Sbjct: 275 INTIEELSKIKMSRFRLEKWVHMPFFADVIRGCYVRIGIGQHEGRMIYRVCE 326
Score = 38.1 bits (87), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 27/31 (87%)
Query: 38 QIVREKERFKPTPYNYAMKKTQLMKERDMAQ 68
+I++EK++F+ P+NYA+ K +LM+E+++A+
Sbjct: 416 RIIQEKQKFQKNPHNYALTKNRLMREKEIAE 446
>gi|393912272|gb|EJD76662.1| hypothetical protein LOAG_16424 [Loa loa]
Length = 721
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 82/167 (49%), Positives = 115/167 (68%)
Query: 130 GEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTE 189
+I V ET K+Y L TRTNKGLKL+HG ERV+RLEF+SN EFT EF +W D +
Sbjct: 394 AQILDVVETAKVYQLENTRTNKGLKLKHGEEERVYRLEFVSNSEFTSHEFNKWYDAMKSN 453
Query: 190 GVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERDM 249
+A+ T D+VE+K +IQ + Y + ++D+E +V+EK RF+ P NYA++K L+K +
Sbjct: 454 NLAILTIDQVEKKEADIQKAVNYNYTDKDIELMVQEKMRFQKAPLNYALEKGNLIKLKQE 513
Query: 250 AQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRR 296
A+ G+ EE ILQ +IDDLE RA EL++ R+ +I IS+IN RNR+
Sbjct: 514 AEQYGNVEEVQILQLQIDDLEARAAELERRRSQSIRGISWINQRNRQ 560
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 37/48 (77%), Gaps = 1/48 (2%)
Query: 339 ELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNT-GIPLYRVSE 385
+L+RIRLSRFK+ K+VH P F + VIGCFVRIGIG N G +YR ++
Sbjct: 348 DLSRIRLSRFKISKIVHAPFFNKTVIGCFVRIGIGRNKEGRSVYRAAQ 395
>gi|196014663|ref|XP_002117190.1| hypothetical protein TRIADDRAFT_61226 [Trichoplax adhaerens]
gi|190580155|gb|EDV20240.1| hypothetical protein TRIADDRAFT_61226 [Trichoplax adhaerens]
Length = 517
Score = 154 bits (389), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 131/195 (67%), Gaps = 3/195 (1%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI V E+G++Y+L KT TNK L LRHG E+ FR+E++SN FT++EF++WK +
Sbjct: 193 VAEIIDVIESGRVYNLNKTSTNKVLHLRHGLDEQNFRMEYVSNSNFTDNEFLKWKTKMKE 252
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
+ LP++D+V++K ++I Y + + D+++I+ EK++F+ P N+A+K+++L + +
Sbjct: 253 LDLNLPSQDDVDKKKEDIIRAANYNFDDADIDEIIAEKDKFRKNPSNFAVKQSKLEQAME 312
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAI-- 306
AQ +GD++E + ++ +I++L+++A ++ K R+ + I IN RNR+KN+ E EKA+
Sbjct: 313 AAQYRGDEDEVNRIKSEIENLDKKAEQISKWRSQRLDPIMSINQRNRQKNLAEIEKALAR 372
Query: 307 -MVSCCCCCSGFSYR 320
+ S C F+ R
Sbjct: 373 EVASDGVCADPFTRR 387
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 49/70 (70%)
Query: 316 GFSYRSVKSSASRKVIEYIETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNN 375
G+S S +++ YI T+ +L+ IRLSR K+E+ VH+P F + V+GCFVR+GIG++
Sbjct: 126 GYSPIRHYDSPQSEIVTYITTRAQLSTIRLSRSKLERWVHMPFFAETVVGCFVRVGIGSH 185
Query: 376 TGIPLYRVSE 385
G +YRV+E
Sbjct: 186 EGKQIYRVAE 195
>gi|242000814|ref|XP_002435050.1| caldesmon, putative [Ixodes scapularis]
gi|215498380|gb|EEC07874.1| caldesmon, putative [Ixodes scapularis]
Length = 623
Score = 144 bits (364), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 81/180 (45%), Positives = 116/180 (64%), Gaps = 21/180 (11%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ +I+ V ET K+Y+LG++RTNK + R+ +SN+
Sbjct: 344 VAQITDVVETAKVYALGRSRTNKACASSTASRARLP-ARVVSNR---------------- 386
Query: 189 EGVALPTKD-EVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKER 247
PT+ +V RK+K++Q + YQ+KE DVE IV EK+RF+ P+NYA++KTQLMK++
Sbjct: 387 ---TSPTRVCKVARKAKDVQEALNYQYKESDVETIVTEKQRFRRNPHNYAVRKTQLMKQK 443
Query: 248 DMAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIM 307
+MA+ G+ EEA L +++ LEERA ELDK RTSTIS+ISYIN RNR KN+ E E+AI+
Sbjct: 444 EMAEQTGNHEEALKLSGELEQLEERARELDKQRTSTISAISYINERNRLKNIVEIERAIL 503
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 42/52 (80%)
Query: 334 IETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
++ KEEL+RIRLSR K+E+ VH P F + V+GCFVRIGIG++ G +YRV++
Sbjct: 295 LKAKEELSRIRLSRHKLERWVHAPFFAKTVVGCFVRIGIGSHNGRAVYRVAQ 346
Score = 45.1 bits (105), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 27/30 (90%)
Query: 39 IVREKERFKPTPYNYAMKKTQLMKERDMAQ 68
IV EK+RF+ P+NYA++KTQLMK+++MA+
Sbjct: 418 IVTEKQRFRRNPHNYAVRKTQLMKQKEMAE 447
>gi|339257198|ref|XP_003369969.1| plus-3 domain protein [Trichinella spiralis]
gi|316965488|gb|EFV50194.1| plus-3 domain protein [Trichinella spiralis]
Length = 660
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 125/215 (58%), Gaps = 19/215 (8%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI V ET K+Y TRTNKGL+LRHG +ERV+RLEF+SN +FT++EF +W D +
Sbjct: 316 VAEIIDVVETAKVYEFENTRTNKGLRLRHGKAERVYRLEFLSNSDFTDTEFAKWVDTMTS 375
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQI---------VREKERFKPTPYNYAMK 239
+ + PT + V+ K ++ +Q+ EEDV+Q+ V+EK+RF+ P NYAM+
Sbjct: 376 QNMEFPTLEHVKNKVADVIAAFNHQYTEEDVDQVSPLRKMCYMVKEKKRFRIAPTNYAMQ 435
Query: 240 KTQLMK--------ERDMAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYIN 291
K QL+K ++++A+ D E +++ I+ L+ A ++ R + I+ IN
Sbjct: 436 KAQLVKSLFKYFSLKQEVAEQNDDTFEVERIKQLIEQLDNAAAAREQRRLQAVKGIADIN 495
Query: 292 NRNRRKNVEEAEKAIMVSCCCCCSG--FSYRSVKS 324
RNR N+ E EKAI S + F+ R+ +S
Sbjct: 496 KRNRLWNMNETEKAIRESSSEVQADDPFTRRNTRS 530
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 39/52 (75%), Gaps = 5/52 (9%)
Query: 334 IETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
++T+EEL++IRLSR LVH P F V+GC+VRI IG N G+P+YRV+E
Sbjct: 272 VKTREELSKIRLSR-----LVHTPFFKNTVVGCYVRISIGANNGVPVYRVAE 318
>gi|308449865|ref|XP_003088103.1| hypothetical protein CRE_23269 [Caenorhabditis remanei]
gi|308249550|gb|EFO93502.1| hypothetical protein CRE_23269 [Caenorhabditis remanei]
Length = 604
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 119/192 (61%), Gaps = 12/192 (6%)
Query: 104 ISSAMFYGSVCDLTSWHIFSSHPQEIGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERV 163
+ M GS W I GV +T K+Y L +TNK +K + G SER
Sbjct: 288 LGQGMISGSQSKYRIWKII-----------GVEQTNKVYDLEGKKTNKSIKCQFGRSERP 336
Query: 164 FRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIV 223
FR++F+SN EF + EF W++ +G ++PT D +E+K +I+ + +++ +++V+ ++
Sbjct: 337 FRMQFVSNSEFEQVEFDEWRNATKAQG-SVPTVDIMEKKHSDIEKAINHKYSDKEVDLMI 395
Query: 224 REKERFKPTPYNYAMKKTQLMKERDMAQSKGDDEEASILQRKIDDLEERANELDKARTST 283
+EK +F+ N+AM K L K++++AQ +GD EA +Q++ID++E A+ELDK R+ +
Sbjct: 396 KEKSKFQKVTRNFAMTKAGLSKQKELAQQRGDIREAERVQKEIDEIERHADELDKERSKS 455
Query: 284 ISSISYINNRNR 295
I +I++IN+RNR
Sbjct: 456 IRAIAFINHRNR 467
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 31/48 (64%)
Query: 330 VIEYIETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTG 377
V + +ET EL + RLSR K+ ++H P F V+GC+VR+G G +G
Sbjct: 248 VKKEVETLAELRKARLSRHKLALMIHAPFFDSTVVGCYVRLGQGMISG 295
>gi|308458419|ref|XP_003091551.1| hypothetical protein CRE_02690 [Caenorhabditis remanei]
gi|308256447|gb|EFP00400.1| hypothetical protein CRE_02690 [Caenorhabditis remanei]
Length = 604
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 119/192 (61%), Gaps = 12/192 (6%)
Query: 104 ISSAMFYGSVCDLTSWHIFSSHPQEIGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERV 163
+ M GS W I GV +T K+Y L +TNK +K + G SER
Sbjct: 288 LGQGMISGSQSKYRIWKII-----------GVEQTNKVYDLEGKKTNKSIKCQFGRSERP 336
Query: 164 FRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIV 223
FR++F+SN EF + EF W++ +G ++PT D +E+K +I+ + +++ +++V+ ++
Sbjct: 337 FRMQFVSNSEFEQVEFDEWRNATKAQG-SVPTVDIMEKKHSDIEKAINHKYSDKEVDLMI 395
Query: 224 REKERFKPTPYNYAMKKTQLMKERDMAQSKGDDEEASILQRKIDDLEERANELDKARTST 283
+EK +F+ N+AM K L K++++AQ +GD EA +Q++ID++E A+ELDK R+ +
Sbjct: 396 KEKSKFQKVTRNFAMTKAGLSKQKELAQQRGDIREAERVQKEIDEIERHADELDKERSKS 455
Query: 284 ISSISYINNRNR 295
I +I++IN+RNR
Sbjct: 456 IRAIAFINHRNR 467
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 31/48 (64%)
Query: 330 VIEYIETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTG 377
V + +ET EL + RLSR K+ ++H P F V+GC+VR+G G +G
Sbjct: 248 VKKEVETLAELRKARLSRHKLALMIHAPFFDSTVVGCYVRLGQGMISG 295
>gi|17560116|ref|NP_505473.1| Protein F25B3.6 [Caenorhabditis elegans]
gi|3876239|emb|CAA94759.1| Protein F25B3.6 [Caenorhabditis elegans]
Length = 613
Score = 135 bits (339), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 117/169 (69%), Gaps = 1/169 (0%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
I +I GV E+ K+Y L +TNK +K ++G SER FR++F+SN +F + EF W C
Sbjct: 302 IWKIVGVEESNKVYELEGKKTNKIIKCQNGGSERPFRMQFVSNADFEQIEFDEWLLACKR 361
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
G LPT D +++K ++I+ + +++ +++V+ +++EK +++ P N+AM K K+++
Sbjct: 362 HG-NLPTVDIMDKKKQDIEKAINHKYSDKEVDLMIKEKSKYQTVPRNFAMTKANWSKQKE 420
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRK 297
+AQ +GD EA +Q KID++E +A+EL+K R+ +IS+I++IN+RNR K
Sbjct: 421 LAQQRGDIREAEQIQTKIDEIERQADELEKERSKSISAIAFINHRNRSK 469
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 339 ELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTG 377
EL R RLSR K+ ++H P F V+GC+VR+G G +G
Sbjct: 257 ELRRARLSRHKLSLMIHAPFFDSTVVGCYVRLGQGQMSG 295
>gi|268559176|ref|XP_002637579.1| Hypothetical protein CBG19313 [Caenorhabditis briggsae]
Length = 601
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 67/167 (40%), Positives = 115/167 (68%), Gaps = 1/167 (0%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
I +I GV ET K+Y L +TNK +K + G +ER FR++F+SN +F + EF W
Sbjct: 297 IWKIVGVEETNKVYDLEGKKTNKSIKCQFGKTERPFRMQFVSNADFEQVEFTEWLAATKA 356
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
GV +PT D +++K +I+ + +++ +++V+Q+V+EK +F+ N+AM K L ++++
Sbjct: 357 YGV-VPTVDIMDKKRLDIEKAINHKYSDKEVDQMVQEKSKFQKVTRNFAMTKAGLSRQKE 415
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNR 295
+AQ +GD EA +Q++ID++E A+ELDK R+ +IS+I++IN+RNR
Sbjct: 416 LAQQRGDIREAERVQKEIDEIERTADELDKQRSKSISAIAFINHRNR 462
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 339 ELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTG 377
EL + RLSR K+ +VH P F V+GC+V++G G +G
Sbjct: 252 ELKKSRLSRHKLSLMVHAPFFDSTVVGCYVKLGQGTISG 290
>gi|341879909|gb|EGT35844.1| hypothetical protein CAEBREN_08873 [Caenorhabditis brenneri]
Length = 610
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 111/167 (66%), Gaps = 1/167 (0%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
I +I GV +T K+Y L +TNK +K + G SER FR++F+SN EF + EF W +
Sbjct: 303 IWKIVGVEQTNKVYDLEGKKTNKSIKCQFGRSERPFRMQFVSNSEFEQVEFDEWLNATKA 362
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
G +PT D +++K +I+ + +++ +++V+ ++ EK +F+ N+AM K L K+++
Sbjct: 363 HG-NVPTVDIMDKKKMDIEKAVNHKYSDKEVDAMIVEKSKFQKVTRNFAMTKAGLAKQKE 421
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNR 295
+AQ +GD EA +Q++ID++E A+ELDK R+ +I I++IN+RNR
Sbjct: 422 LAQQRGDIREAERVQKEIDEIERHADELDKERSKSIRGIAFINHRNR 468
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 334 IETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTG 377
+ET EL R RLSR K+ ++H P F V+GC+VR+G G +G
Sbjct: 253 VETLAELRRARLSRHKLSLMIHAPFFDSTVVGCYVRLGQGQMSG 296
>gi|341879382|gb|EGT35317.1| hypothetical protein CAEBREN_03042 [Caenorhabditis brenneri]
Length = 610
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 111/167 (66%), Gaps = 1/167 (0%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
I +I GV +T K+Y L +TNK +K + G SER FR++F+SN EF + EF W +
Sbjct: 303 IWKIVGVEQTNKVYDLEGKKTNKSIKCQFGRSERPFRMQFVSNSEFEQVEFDEWLNATKA 362
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
G +PT D +++K +I+ + +++ +++V+ ++ EK +F+ N+AM K L K+++
Sbjct: 363 HG-NVPTVDIMDKKKMDIEKAVNHKYSDKEVDAMIVEKSKFQKVTRNFAMTKAGLAKQKE 421
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNR 295
+AQ +GD EA +Q++ID++E A+ELDK R+ +I I++IN+RNR
Sbjct: 422 LAQQRGDIREAERVQKEIDEIERHADELDKERSKSIRGIAFINHRNR 468
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 334 IETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTG 377
+ET EL R RLSR K+ ++H P F V+GC+VR+G G +G
Sbjct: 253 VETLAELRRARLSRHKLSLMIHAPFFDSTVVGCYVRLGQGQMSG 296
>gi|256084298|ref|XP_002578367.1| hypothetical protein [Schistosoma mansoni]
gi|353231347|emb|CCD77765.1| hypothetical protein Smp_161170 [Schistosoma mansoni]
Length = 717
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 109/178 (61%), Gaps = 1/178 (0%)
Query: 130 GEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTE 189
EI V ET KIY LG TRTNKG+ +R G + FRL FISN +F + EF W +
Sbjct: 345 AEIVDVVETPKIYDLGDTRTNKGIVVRVGKDQSTFRLAFISNSDFQQDEFDSWMRRIHLA 404
Query: 190 GVALPTKDEVERKSKEIQNGMMYQWKEEDV-EQIVREKERFKPTPYNYAMKKTQLMKERD 248
+ PT + V K+ EI + ++E V EQI++ K RF+ P N+A++K +L+K+R+
Sbjct: 405 NMKPPTLNFVRDKAAEITEAINRPIRDERVVEQIIQSKRRFQKAPTNFALRKAELIKQRE 464
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAI 306
A++ GD E L +I+++E +A +++ RT SI+ IN RNR +V++AE+AI
Sbjct: 465 QAETDGDTELLKHLDSEIEEIESQAERIERRRTLGFKSITSINQRNRALSVQQAEEAI 522
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 41/54 (75%)
Query: 332 EYIETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
E + + E L+RIRLSRFKMEK VH+P F ++ GCFVRI IG + G+P+YR +E
Sbjct: 293 ELVSSVEHLSRIRLSRFKMEKWVHMPFFDDLIKGCFVRINIGLHQGVPIYRCAE 346
>gi|358254073|dbj|GAA54107.1| RNA polymerase-associated protein RTF1 homolog [Clonorchis
sinensis]
Length = 897
Score = 127 bits (320), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 111/178 (62%), Gaps = 1/178 (0%)
Query: 130 GEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTE 189
EI + ET KIY LG+TRTNKG+ +R G + FRL F+SN +F +EF W +
Sbjct: 401 AEIVDIIETPKIYDLGETRTNKGMVVRVGKDQGTFRLAFVSNSDFLPAEFESWLRRISDA 460
Query: 190 GVALPTKDEVERKSKEIQNGMMYQWKEED-VEQIVREKERFKPTPYNYAMKKTQLMKERD 248
+ PT V K+ +IQ+ + K+E VEQI++ K+RF+ P N+A++K +L+K+R+
Sbjct: 461 NMKPPTLAFVSEKAAQIQDAINKPIKDEHLVEQIIQSKKRFQRAPTNFALRKAELLKQRE 520
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAI 306
A+ +GD + +++D+E +A +D+ RT SI+ IN RNR +V++AE+AI
Sbjct: 521 QAEVEGDTLAIQRIDAELEDIETQAERIDRRRTMGFKSITSINQRNRILSVQQAEEAI 578
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 40/52 (76%)
Query: 334 IETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
+ + E+L+RIRLSRFK+EK VH+P F +V GCFVRI IG N G+ +YR +E
Sbjct: 351 VSSVEQLSRIRLSRFKLEKWVHMPFFDSLVKGCFVRINIGLNQGVAVYRCAE 402
>gi|313234839|emb|CBY24783.1| unnamed protein product [Oikopleura dioica]
Length = 504
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 111/176 (63%), Gaps = 9/176 (5%)
Query: 129 IGEISGVCETGKIYSLG-------KTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIR 181
I EI E+ K Y L K TNK L LR GNS+R FR+ FISN +++++EF
Sbjct: 296 IAEIKDTGESSKTYKLDPGDPKATKIHTNKTLLLRIGNSDRAFRMCFISNSDWSDTEFDF 355
Query: 182 WKDQCMTEGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKT 241
WK + G LPT ++E+K KE++ + + +VE +V+EK + + P N+A++KT
Sbjct: 356 WKKHGLKSG--LPTVGDIEKKQKELERMKKHVITDREVETMVKEKAKHRTNPINFALQKT 413
Query: 242 QLMKERDMAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRK 297
L+K RD A++ G+ EE + +Q K++++E+RAN+L + R + I+ I+ IN R+RRK
Sbjct: 414 TLLKMRDAAETAGNIEEVASIQSKLEEIEKRANKLSRDRQAGIAGITEINERSRRK 469
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 37/54 (68%), Gaps = 3/54 (5%)
Query: 334 IETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVR--IGIGNNTGIPLYRVSE 385
+E KEEL ++SRF++ + +H+P F ++G +VR IG+G+ +G YR++E
Sbjct: 246 VECKEELKPAKMSRFRLCQWMHMPWFRNTIVGTYVRVSIGLGDESGA-RYRIAE 298
>gi|312074618|ref|XP_003140051.1| hypothetical protein LOAG_04465 [Loa loa]
Length = 437
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 57/116 (49%), Positives = 80/116 (68%)
Query: 130 GEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTE 189
+I V ET K+Y L TRTNKGLKL+HG ERV+RLEF+SN EFT EF +W D +
Sbjct: 315 AQILDVVETAKVYQLENTRTNKGLKLKHGEEERVYRLEFVSNSEFTSHEFNKWYDAMKSN 374
Query: 190 GVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMK 245
+A+ T D+VE+K +IQ + Y + ++D+E +V+EK RF+ P NYA++K L+K
Sbjct: 375 NLAILTIDQVEKKEADIQKAVNYNYTDKDIELMVQEKMRFQKAPLNYALEKGNLIK 430
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 37/48 (77%), Gaps = 1/48 (2%)
Query: 339 ELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNT-GIPLYRVSE 385
+L+RIRLSRFK+ K+VH P F + VIGCFVRIGIG N G +YR ++
Sbjct: 269 DLSRIRLSRFKISKIVHAPFFNKTVIGCFVRIGIGRNKEGRSVYRAAQ 316
>gi|313246052|emb|CBY35015.1| unnamed protein product [Oikopleura dioica]
Length = 504
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 111/176 (63%), Gaps = 9/176 (5%)
Query: 129 IGEISGVCETGKIYSLG-------KTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIR 181
I EI E+ K Y L K TNK L LR GNS+R FR+ FISN +++++EF
Sbjct: 296 IAEIKDTGESSKTYKLDPGDPKATKIHTNKTLLLRIGNSDRAFRMCFISNSDWSDTEFDF 355
Query: 182 WKDQCMTEGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKT 241
WK + G LPT ++E+K KE++ + + +VE +V+EK + + P N+A++KT
Sbjct: 356 WKKHGLKSG--LPTVGDIEKKQKELERMKKHVITDREVETMVKEKAKHRTNPINFALQKT 413
Query: 242 QLMKERDMAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRK 297
L+K RD A++ G+ EE + +Q K++++E+RAN+L + R + I+ I+ IN R+RRK
Sbjct: 414 TLLKMRDAAETAGNIEEVASIQSKLEEIEKRANKLSRDRQAGIAGITEINERSRRK 469
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 37/54 (68%), Gaps = 3/54 (5%)
Query: 334 IETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVR--IGIGNNTGIPLYRVSE 385
+E KEEL ++SRF++ + +H+P F ++G +VR IG+G+ +G YR++E
Sbjct: 246 VECKEELKPAKMSRFRLCQWMHMPWFRNTIVGTYVRVSIGLGDESGA-RYRIAE 298
>gi|170587230|ref|XP_001898381.1| Plus-3 domain containing protein [Brugia malayi]
gi|158594207|gb|EDP32793.1| Plus-3 domain containing protein [Brugia malayi]
Length = 506
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 80/116 (68%)
Query: 130 GEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTE 189
+I V ET K+Y L TRTNKGLKL+HG ERV+RLEF+SN EFT EF +W D +
Sbjct: 382 AQILDVVETAKVYQLENTRTNKGLKLKHGEEERVYRLEFVSNSEFTNHEFNKWYDAMKSN 441
Query: 190 GVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMK 245
+++ T D+VE+K +IQ + Y + ++D+E +V+EK RF+ P NYA++K L+K
Sbjct: 442 NLSILTIDQVEKKEADIQKAVNYNYTDKDIELMVQEKMRFQKAPLNYALEKGNLIK 497
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Query: 339 ELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNT-GIPLYRVSE 385
+L RIRLSRFK+ ++VH P F + VIGCFVRIGIG N G +YR ++
Sbjct: 336 DLARIRLSRFKISRIVHAPFFNKTVIGCFVRIGIGRNKEGRSVYRAAQ 383
>gi|402591880|gb|EJW85809.1| plus-3 domain-containing protein [Wuchereria bancrofti]
Length = 463
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 80/116 (68%)
Query: 130 GEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTE 189
+I V ET K+Y L TRTNKGLKL+HG ERV+RLEF+SN EFT EF +W D +
Sbjct: 344 AQILDVVETAKVYQLENTRTNKGLKLKHGEEERVYRLEFVSNSEFTSHEFNKWYDAMKSN 403
Query: 190 GVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMK 245
+++ T D+VE+K +IQ + Y + ++D+E +V+EK RF+ P NYA++K L+K
Sbjct: 404 NLSILTIDQVEKKEADIQKAVNYNYTDKDIELMVQEKMRFQKAPLNYALEKGNLIK 459
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Query: 349 KMEKLVHLPIFGQIVIGCFVRIGIGNNT-GIPLYRVSE 385
K E++VH P F + VIGCFVRIGIG N G +YR ++
Sbjct: 308 KRERIVHAPFFNKTVIGCFVRIGIGRNKEGRSVYRAAQ 345
>gi|126030146|pdb|2BZE|A Chain A, Nmr Structure Of Human Rtf1 Plus3 Domain
Length = 153
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 49/82 (59%), Positives = 64/82 (78%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI+GV ET K+Y LG TRTNKGL+LRHGN +RVFRLEF+SNQEFTESEF++WK+ +
Sbjct: 71 VAEITGVVETAKVYQLGGTRTNKGLQLRHGNDQRVFRLEFVSNQEFTESEFMKWKEAMFS 130
Query: 189 EGVALPTKDEVERKSKEIQNGM 210
G+ LPT DE+ +K I+ +
Sbjct: 131 AGMQLPTLDEINKKELSIKEAL 152
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 39/52 (75%)
Query: 334 IETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
+ EELNR+RLSR K+E+ H+P F + V GCFVRIGIGN+ P+YRV+E
Sbjct: 22 VSLPEELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAE 73
>gi|159164068|pdb|2DB9|A Chain A, Solution Structure Of The Plus-3 Domain Of Human Kiaa0252
Protein
Length = 149
Score = 111 bits (278), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 49/79 (62%), Positives = 63/79 (79%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI+GV ET K+Y LG TRTNKGL+LRHGN +RVFRLEF+SNQEFTESEF++WK+ +
Sbjct: 63 VAEITGVVETAKVYQLGGTRTNKGLQLRHGNDQRVFRLEFVSNQEFTESEFMKWKEAMFS 122
Query: 189 EGVALPTKDEVERKSKEIQ 207
G+ LPT DE+ +K I+
Sbjct: 123 AGMQLPTLDEINKKELSIK 141
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 39/52 (75%)
Query: 334 IETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
+ EELNR+RLSR K+E+ H+P F + V GCFVRIGIGN+ P+YRV+E
Sbjct: 14 VSLPEELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAE 65
>gi|383280264|pdb|3U1U|A Chain A, Crystal Structure Of Rna Polymerase-Associated Protein
Rtf1 Homolog Plus-3 Domain
gi|383280265|pdb|3U1U|B Chain B, Crystal Structure Of Rna Polymerase-Associated Protein
Rtf1 Homolog Plus-3 Domain
Length = 137
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 49/79 (62%), Positives = 61/79 (77%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ EI+GV ET K+Y LG TRTNKGL+LRHGN +RVFRLEF+SNQEFTESEF +WK+ +
Sbjct: 57 VAEITGVVETAKVYQLGGTRTNKGLQLRHGNDQRVFRLEFVSNQEFTESEFXKWKEAXFS 116
Query: 189 EGVALPTKDEVERKSKEIQ 207
G LPT DE+ +K I+
Sbjct: 117 AGXQLPTLDEINKKELSIK 135
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 38/52 (73%)
Query: 334 IETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
+ EELNR+RLSR K+E+ H P F + V GCFVRIGIGN+ P+YRV+E
Sbjct: 8 VSLPEELNRVRLSRHKLERWCHXPFFAKTVTGCFVRIGIGNHNSKPVYRVAE 59
>gi|320168140|gb|EFW45039.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 784
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 103/174 (59%), Gaps = 1/174 (0%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ +++GV E K Y LG TRTNK ++L + S R +RLE++SN +FTESEF +WKD
Sbjct: 489 LAKVAGVEEGKKAYQLGATRTNKLIELDYCGSHRSYRLEYVSNTDFTESEFYKWKDDMAF 548
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
+ LP+ DE+ +SK+IQ+ + + ++ +++E+ RF+ P A KT L E
Sbjct: 549 NRIPLPSLDELRHRSKQIQSMSQHVRTSQVIDAMLQERNRFQKAPEGLAYAKTSLAHEIS 608
Query: 249 MAQSKGDDEE-ASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEE 301
+ + +GD + L+ K+ + E A E +K T +S +S IN +NR KN+ +
Sbjct: 609 VLEQQGDPQGLLPGLREKLAETEAAAEENNKKATENLSLVSQINAKNRHKNLSD 662
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 336 TKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
T ++LNR RL+R K+EK VH P F + + C+VR+ IG + G YR+++
Sbjct: 442 TLDDLNRARLTRSKLEKYVHAPFFAKSIRNCYVRVNIGVSNGQTTYRLAK 491
>gi|19112299|ref|NP_595507.1| RNA polymerase II associated Paf1 complex (predicted)
[Schizosaccharomyces pombe 972h-]
gi|74582963|sp|O94667.1|RTF1_SCHPO RecName: Full=RNA polymerase-associated protein C651.09c; AltName:
Full=Protein RTF1 homolog
gi|4467281|emb|CAB37605.1| RNA polymerase II associated Paf1 complex (predicted)
[Schizosaccharomyces pombe]
Length = 560
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 95/171 (55%)
Query: 131 EISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEG 190
++ G+ E+ K Y + T L+ HG S+RVF + +SN+ F++ +F RW Q M +
Sbjct: 265 QVKGILESRKPYRVDGVLTKVSLECFHGRSKRVFDVNVLSNEPFSDHDFQRWHHQMMEDK 324
Query: 191 VALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERDMA 250
+++P+K+ V+RK ++++ Y E++V I+ K+ P N A +KT+L + R A
Sbjct: 325 LSMPSKNFVQRKLNDLRDMSKYVLSEKEVSDIINRKKELSRVPSNIAAEKTRLRQRRQAA 384
Query: 251 QSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEE 301
G+ E + +++ LEE + ++ S + ++ +N RNRR+N E
Sbjct: 385 YVAGNAELVKEIDDQLNTLEELSMGSNQNSNSAMDQLAKVNERNRRRNHTE 435
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%)
Query: 339 ELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRV 383
+LN IRL R + + ++ PIF V GCFVR+ IG G +YR+
Sbjct: 219 DLNAIRLGRKHVAEYMYHPIFESTVTGCFVRVKIGERDGQGVYRL 263
>gi|194766101|ref|XP_001965163.1| GF21518 [Drosophila ananassae]
gi|190617773|gb|EDV33297.1| GF21518 [Drosophila ananassae]
Length = 587
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 89/164 (54%), Gaps = 1/164 (0%)
Query: 123 SSHPQEIGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRW 182
S++ I +I G+ + K Y LG RTN L+LR+G ER+ ++ +SNQ T+ EF W
Sbjct: 287 SANASRIYQIVGLQQDNKDYQLGGKRTNIVLRLRYGVQERLSLMDVVSNQPVTKYEFYMW 346
Query: 183 KDQCMTEGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQ 242
+ ALP ++ +K ++I N M Y + E DVE+I++ K + P A KK
Sbjct: 347 SGTWQRDLKALPLLSQIAKKQEDIANAMEYSYTEGDVEKIIQSKRQAAPKRVTSAYKKVC 406
Query: 243 LMKERDMAQSKGDDEEASILQRKIDDLE-ERANELDKARTSTIS 285
L+ ERD A D E+ L+++I +L+ +LD A+ + S
Sbjct: 407 LIMERDQAVGLNDMEKVKRLEKQIQELDGPSGGQLDSAKEPSHS 450
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 29/41 (70%)
Query: 334 IETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGN 374
+ +E+L+R L+R ++E L+ P+F + V+ CFVR+ IG+
Sbjct: 244 VTIREQLSRAILTRVQLESLLDKPVFEKTVVDCFVRVNIGS 284
>gi|440801531|gb|ELR22549.1| Plus3 domain containing protein [Acanthamoeba castellanii str.
Neff]
Length = 627
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 100/191 (52%), Gaps = 9/191 (4%)
Query: 135 VCETG-KIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVAL 193
V E G + Y++GK +T LKL HG + + F +E++SN T E+ RW + + +
Sbjct: 309 VAEKGPRTYTVGKKKTQYMLKLSHGGNSKNFSIEYVSNSPITMPEYERWLREVDKAHMDI 368
Query: 194 PTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERDMAQSK 253
PT ++E + +++++ Y + ED+ +++ EK + + P N A K L++ R+ A+ +
Sbjct: 369 PTPADIEARRRDLESTRHYVYTHEDISRMIEEKSQLRARPVNLAATKAHLIQLREAAKDR 428
Query: 254 GDDEEASILQRKIDDLEERANELDKARTSTIS---SISYINNRNRRKNVEEAE-KAIMVS 309
G EE + K+D +R ELDK T + IN RN+ KN+ ++ A++ +
Sbjct: 429 GTAEEVA----KVDAELQRFAELDKRETEKRQKKLKVGDINKRNKAKNIVDSHVTAVIEA 484
Query: 310 CCCCCSGFSYR 320
FS R
Sbjct: 485 KAETDDPFSRR 495
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Query: 292 NRNRRKNVEEAEKAIMVSCCCCCSGFSYRSVKSSASRKVIEYIETKEELNRIRLSRFKME 351
+R R++ +A A S R + S +V +Y T EE+N ++L R +E
Sbjct: 213 DRGRKRAKHDARPAATPSAADKSRVEEERKQEWSEKVEVRQY-PTLEEVNSVKLGRSLLE 271
Query: 352 KLVHLPIFGQIVIGCFVRIGIGNN 375
K + P F + V FVR+GIG N
Sbjct: 272 KWLDQPFFEKTVPRFFVRVGIGMN 295
>gi|24585757|ref|NP_724376.1| CG31703 [Drosophila melanogaster]
gi|22947061|gb|AAN11144.1| CG31703 [Drosophila melanogaster]
Length = 439
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 103/194 (53%), Gaps = 7/194 (3%)
Query: 78 RDGNLSSLPRAGIEPEIVEVVYKKDLISSAMFYGSVCDLTSWHIFSSHPQEIGEISGVCE 137
R NL L RA ++ ++ + K + + A+ GS L ++S I E + +
Sbjct: 98 RVSNLEQLSRAVLKRNDIKNLLGKPIFAEAVI-GSFVRLNVGKVYS-----IYETIALHQ 151
Query: 138 TGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKD 197
K Y + RTN L LR G+ +R R++ +SNQ T+ EF+ W + + LPT +
Sbjct: 152 DSKDYRVDGKRTNLILVLRCGSEKRYSRIDVVSNQPITQKEFLLWLETNLRNRCTLPTLN 211
Query: 198 EVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERDMAQSKGDDE 257
++ +K +++N Y + E DVE+++++K+ N A +K L+ ERDMA D E
Sbjct: 212 DIAKKQVQVKNACKYSYTETDVEKLIQDKKE-AGIKQNAAYRKISLIIERDMAAGMNDVE 270
Query: 258 EASILQRKIDDLEE 271
+ +L++KI +++E
Sbjct: 271 KVQVLEKKILEIDE 284
>gi|24585751|ref|NP_724373.1| CG31702 [Drosophila melanogaster]
gi|22947059|gb|AAN11142.1| CG31702 [Drosophila melanogaster]
gi|274513953|gb|ACZ98477.1| FI11009p [Drosophila melanogaster]
Length = 441
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 103/194 (53%), Gaps = 7/194 (3%)
Query: 78 RDGNLSSLPRAGIEPEIVEVVYKKDLISSAMFYGSVCDLTSWHIFSSHPQEIGEISGVCE 137
R NL L RA ++ ++ + K + + A+ GS + ++S I E + +
Sbjct: 98 RVSNLEQLSRAVLKRNDIKNLLGKPIFAEAVI-GSFVRINVGKVYS-----IYETIALHQ 151
Query: 138 TGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKD 197
K Y + RTN L LR G+ +R R++ +SNQ T+ EF+ W + + LPT +
Sbjct: 152 DSKDYRVDGKRTNLTLVLRCGSEKRYSRIDVVSNQPITQKEFLLWLETNLRNRCTLPTLN 211
Query: 198 EVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERDMAQSKGDDE 257
++ +K +++N Y + E DVE+++++K+ N A +K L+ ERDMA D E
Sbjct: 212 DIAKKQVQVKNACKYSYTETDVEKLIQDKKE-AGIKQNAAYRKISLIIERDMAAGMNDVE 270
Query: 258 EASILQRKIDDLEE 271
+ +L++KI +++E
Sbjct: 271 KVQVLEKKILEIDE 284
>gi|189181857|gb|ACD81705.1| IP12502p [Drosophila melanogaster]
Length = 467
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 103/194 (53%), Gaps = 7/194 (3%)
Query: 78 RDGNLSSLPRAGIEPEIVEVVYKKDLISSAMFYGSVCDLTSWHIFSSHPQEIGEISGVCE 137
R NL L RA ++ ++ + K + + A+ GS + ++S I E + +
Sbjct: 124 RVSNLEQLSRAVLKRNDIKNLLGKPIFAEAVI-GSFVRINVGKVYS-----IYETIALHQ 177
Query: 138 TGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKD 197
K Y + RTN L LR G+ +R R++ +SNQ T+ EF+ W + + LPT +
Sbjct: 178 DSKDYRVDGKRTNLTLVLRCGSEKRYSRIDVVSNQPITQKEFLLWLETNLRNRCTLPTLN 237
Query: 198 EVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERDMAQSKGDDE 257
++ +K +++N Y + E DVE+++++K+ N A +K L+ ERDMA D E
Sbjct: 238 DIAKKQVQVKNACKYSYTETDVEKLIQDKKE-AGIKQNAAYRKISLIIERDMAAGMNDVE 296
Query: 258 EASILQRKIDDLEE 271
+ +L++KI +++E
Sbjct: 297 KVQVLEKKILEIDE 310
>gi|289526403|gb|ADD01324.1| FI13029p [Drosophila melanogaster]
Length = 467
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 103/194 (53%), Gaps = 7/194 (3%)
Query: 78 RDGNLSSLPRAGIEPEIVEVVYKKDLISSAMFYGSVCDLTSWHIFSSHPQEIGEISGVCE 137
R NL L RA ++ ++ + K + + A+ GS + ++S I E + +
Sbjct: 124 RVSNLEQLSRAVLKRNDIKNLLGKPIFAEAVI-GSFVRINVGKVYS-----IYETIALHQ 177
Query: 138 TGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKD 197
K Y + RTN L LR G+ +R R++ +SNQ T+ EF+ W + + LPT +
Sbjct: 178 DSKDYRVDGKRTNLTLVLRCGSEKRYSRIDVVSNQPITQKEFLLWLETNLRNRCTLPTLN 237
Query: 198 EVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERDMAQSKGDDE 257
++ +K +++N Y + E DVE+++++K+ N A +K L+ ERDMA D E
Sbjct: 238 DIAKKQVQVKNACKYSYTETDVEKLIQDKKE-AGIKQNAAYRKISLIIERDMAAGMNDVE 296
Query: 258 EASILQRKIDDLEE 271
+ +L++KI +++E
Sbjct: 297 KVQVLEKKILEIDE 310
>gi|195354115|ref|XP_002043546.1| GM16155 [Drosophila sechellia]
gi|194127693|gb|EDW49736.1| GM16155 [Drosophila sechellia]
Length = 437
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 110/214 (51%), Gaps = 14/214 (6%)
Query: 63 ERDMA-----QSKIGESQPFRDGNLSSLPRAGIEPEIVEVVYKKDLISSAMFYGSVCDLT 117
ERD A Q+K+ + R NL L RA ++ ++ + K + + A+ GS L
Sbjct: 80 ERDNAAQNDPQTKVESEE--RVSNLEQLSRAVLKRSDLKNLLDKPIFAEAVI-GSFVRLN 136
Query: 118 SWHIFSSHPQEIGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTES 177
I+ I E + + K Y + RTN L LR G+ +R R++ +SNQ T+
Sbjct: 137 VGKIYC-----IYETIALHQDRKDYRVDGKRTNLILVLRFGSEKRYSRIDVVSNQPITQK 191
Query: 178 EFIRWKDQCMTEGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYA 237
EF+ W + + LPT +++ +K +++N Y + E DVE++++ K R N A
Sbjct: 192 EFLLWLETNLRNRCTLPTLNDIAKKQVQVKNAYKYSYTETDVEKLIQAK-REAGIKQNAA 250
Query: 238 MKKTQLMKERDMAQSKGDDEEASILQRKIDDLEE 271
+K L+ ERDMA D E+ +L++KI +++E
Sbjct: 251 YRKISLIIERDMAAGMNDVEKVQVLEKKILEIDE 284
>gi|328766449|gb|EGF76503.1| hypothetical protein BATDEDRAFT_92554 [Batrachochytrium
dendrobatidis JAM81]
Length = 590
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 152/314 (48%), Gaps = 17/314 (5%)
Query: 41 REKERFKPTPYNYAMKKTQLMKERDMAQSKIGESQPFRDG-NL-SSLPRAGIEPEIVEVV 98
REKER T Y+ + +R A S S+ G NL SSLP A +I +V
Sbjct: 212 REKERLART-YDEDENGSDDGYKRSKAPSYSSHSEDEGTGSNLASSLPAAANIEDIRSIV 270
Query: 99 YKKDLIS---SAMFYGSVCDLTSWHI-FSSHP---QEIGEISGVCET---GKIYSLGKTR 148
+D + A F+ S I + P +++ ++ V ET ++Y L T
Sbjct: 271 VTRDELERWVHADFFSSTIIGCFVRIGVGNDPNTREQVYRLARVVETPAYHRVYRLAGTL 330
Query: 149 TNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEVERKSKEIQN 208
T LK+ HG + + F ++ +SN+ FT SE+ R++ E ++ T D+V RK +++Q+
Sbjct: 331 TKIALKIAHGKATKTFLMDIVSNRPFTVSEWNRYEQTMQIEKQSMITADQVRRKKRDLQS 390
Query: 209 GMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERDMAQSKGDDEEASILQRKIDD 268
+ + +++ +++ K+ P N ++K ++ + +A+ KGD + I + +I +
Sbjct: 391 AREHIFTNDEINTMIKRKKTLIKVPANITLEKLRIKQALQVAEEKGDQAQVDIYRDRIFE 450
Query: 269 LEERANELDKARTSTISSISYINNRNRRKNV---EEAEKAIM-VSCCCCCSGFSYRSVKS 324
L + E K TS + + + +N RNR+ N EAEK ++ + + + +
Sbjct: 451 LNQLGEEKSKKDTSHLEAFTKLNERNRKSNFTEGREAEKNLLELKKSKGTVAYDPFARRK 510
Query: 325 SASRKVIEYIETKE 338
+A + V+ I+ KE
Sbjct: 511 TAPKHVVNRIDAKE 524
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
Query: 338 EELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGN--NTGIPLYRVS 384
E++ I ++R ++E+ VH F +IGCFVRIG+GN NT +YR++
Sbjct: 264 EDIRSIVVTRDELERWVHADFFSSTIIGCFVRIGVGNDPNTREQVYRLA 312
>gi|195580739|ref|XP_002080192.1| GD24344 [Drosophila simulans]
gi|194192201|gb|EDX05777.1| GD24344 [Drosophila simulans]
Length = 437
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 100/192 (52%), Gaps = 7/192 (3%)
Query: 80 GNLSSLPRAGIEPEIVEVVYKKDLISSAMFYGSVCDLTSWHIFSSHPQEIGEISGVCETG 139
NL L RA ++ ++ + K + + A+ GS L I+ I E + +
Sbjct: 100 SNLEQLSRAVLKRSDIKNLLDKPIFAEAVI-GSFVRLNVGKIYC-----IYETIALHQDR 153
Query: 140 KIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEV 199
K Y + RTN L LR G+ +R R++ +SNQ T+ EF+ W + + LPT +++
Sbjct: 154 KDYRVDGKRTNLILVLRFGSEKRYSRIDVVSNQPITQKEFLVWLESNLRNRCTLPTLNDI 213
Query: 200 ERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERDMAQSKGDDEEA 259
+K +++N Y + E DVE++++ K R N A +K L+ ERDMA D E+
Sbjct: 214 AKKQVQVKNACKYSYTETDVEKLIQAK-REAGKKQNAAYRKISLIIERDMAAGMNDVEKV 272
Query: 260 SILQRKIDDLEE 271
+L++KI ++++
Sbjct: 273 QVLEKKILEIDQ 284
>gi|167536419|ref|XP_001749881.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771596|gb|EDQ85260.1| predicted protein [Monosiga brevicollis MX1]
Length = 572
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 86/163 (52%)
Query: 136 CETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPT 195
E G++YSL KT+T+ +++RHG+ + FR+ ++SN+ SE++RW D +L
Sbjct: 276 VERGRVYSLEKTKTDLHIRVRHGSDIKRFRMAYVSNKPIAHSEYVRWADATKRSDGSLVM 335
Query: 196 KDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERDMAQSKGD 255
+ V++K +++ + Y K DV IV K+R N +K +L +E A+ GD
Sbjct: 336 RSHVKKKLEDLAHAKDYIHKGSDVAFIVASKKRVGVAAINKVAEKERLQRELARAELTGD 395
Query: 256 DEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKN 298
E LQ ++D + + + K + + ++ +N RNR N
Sbjct: 396 KAEVDRLQEELDRVMVKQVQAYKMKEHHQAQVARVNERNRLDN 438
Score = 44.3 bits (103), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 332 EYIE-TKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNN--TGIPLYRV 383
+YIE T EEL IR+SR K+ H P F + V+G VR+ IG N T + YR+
Sbjct: 216 DYIEATFEELESIRVSRHKLFTWAHEPFFEKTVLGLVVRVSIGVNHTTNVETYRM 270
>gi|198476153|ref|XP_001357277.2| GA16406 [Drosophila pseudoobscura pseudoobscura]
gi|198137569|gb|EAL34346.2| GA16406 [Drosophila pseudoobscura pseudoobscura]
Length = 646
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 82/151 (54%), Gaps = 1/151 (0%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
I +I+G+ T Y LG T+ L +RHG ER+ RL+ +SN F W D C
Sbjct: 317 IYQITGLVHTDVTYQLGHKTTDYQLNVRHGRLERLTRLDAVSNSPVPNVAFRNWIDNCEK 376
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
+ LP + +K ++I+ Y + E+DV IV++K + A++K +L++ERD
Sbjct: 377 DNWVLPELSLITKKEQDIKKATNYIFTEDDVADIVKKKRESGLSQEKVAVRKIRLIEERD 436
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKA 279
+A + D E+ L ++I ++++ ++ DKA
Sbjct: 437 LALTNNDHEKVVRLDKEIKEIDQDQDQ-DKA 466
>gi|198477196|ref|XP_002136714.1| GA23238 [Drosophila pseudoobscura pseudoobscura]
gi|198145017|gb|EDY71729.1| GA23238 [Drosophila pseudoobscura pseudoobscura]
Length = 640
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 82/151 (54%), Gaps = 1/151 (0%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
I +I+G+ T Y LG T+ L +RHG ER+ RL+ +SN F W D C
Sbjct: 311 IYQITGLVHTDVTYQLGHKTTDYQLNVRHGRLERLTRLDAVSNSPVPNVAFRNWIDNCEK 370
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
+ LP + +K ++I+ Y + E+DV IV++K + A++K +L++ERD
Sbjct: 371 DNWVLPELSLITKKEQDIKKATNYIFTEDDVADIVKKKRESGLSQEKVAVRKIRLIEERD 430
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKA 279
+A + D E+ L ++I ++++ ++ DKA
Sbjct: 431 LALTNNDHEKVVRLDKEIKEIDQDQDQ-DKA 460
>gi|213410467|ref|XP_002176003.1| RNA polymerase-associated protein Rtf1 [Schizosaccharomyces
japonicus yFS275]
gi|212004050|gb|EEB09710.1| RNA polymerase-associated protein Rtf1 [Schizosaccharomyces
japonicus yFS275]
Length = 541
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 101/205 (49%), Gaps = 3/205 (1%)
Query: 131 EISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEG 190
+I G+ + K Y + + TN L+ HG R F + +SN+ F++ +F RW+ Q +
Sbjct: 264 QIKGISKGKKAYRVEGSLTNVMLECTHGRYRRAFDISVLSNEPFSQHDFDRWQHQLEEDH 323
Query: 191 VALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERDMA 250
+ P KD ++ + +Q Y + +V ++VR K P N + +KT L +R A
Sbjct: 324 LRPPRKDFFKKHLEGLQRMASYILNDTEVSEVVRIKRELSRIPSNISAEKTNLRMKRQAA 383
Query: 251 QSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEE---AEKAIM 307
+ + L +++ LEE + TST+ +S +N RNRRKN EE AEK +
Sbjct: 384 LAANQMDLVQELDERLNTLEELSMGSRPNGTSTLDQLSKVNERNRRKNQEEVRLAEKRMN 443
Query: 308 VSCCCCCSGFSYRSVKSSASRKVIE 332
+ +++SV S A+ + E
Sbjct: 444 DERRRMTAMATFKSVNSVATDVLTE 468
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 336 TKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRV 383
T +++N IRL R + K + P+F +GCFVR+ IG G +YR+
Sbjct: 215 TLDDVNTIRLGRKHIVKYMFHPLFESCTVGCFVRVKIGERHGESVYRL 262
>gi|296425369|ref|XP_002842214.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638475|emb|CAZ86405.1| unnamed protein product [Tuber melanosporum]
Length = 567
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 102/179 (56%), Gaps = 3/179 (1%)
Query: 129 IGEISGVCETGKIYSL--GKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQC 186
+G + G +GK Y++ GK RT++ L++ G +ER F +EF+S+ TE+E R+K Q
Sbjct: 298 LGWVKGFV-SGKYYNMLDGKRRTDQHLRVSQGLAERSFGMEFMSDSPITEAELNRFKKQM 356
Query: 187 MTEGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKE 246
+ A+P +E+KS+E++ +++V +++R++ K N +K+ +L
Sbjct: 357 EFDHCAMPPLSLLEKKSRELRELDNRVLTQDEVNEMIRKRNSDKVDTVNIVLKRGRLRDA 416
Query: 247 RDMAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKA 305
R+ AQ KGD+ E + + +++ DL ++ + S + ++ +N NR+KNV E KA
Sbjct: 417 RESAQLKGDEAEVARIDKELQDLGDQHGKSLVVPKSQMERLAKLNAVNRKKNVAEIRKA 475
>gi|195156193|ref|XP_002018985.1| GL25666 [Drosophila persimilis]
gi|194115138|gb|EDW37181.1| GL25666 [Drosophila persimilis]
Length = 656
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 79/147 (53%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
I +I+G+ T Y LG T+ L +RHG ER+ RL+ +SN F W D C
Sbjct: 323 IYQITGLVHTDVTYQLGHKTTDYQLNVRHGRLERLTRLDAVSNSPVPAVAFRNWIDSCEK 382
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
+ LP + +K ++I+ Y + E+DV IV++K + A++K +L++ERD
Sbjct: 383 DNWVLPELSLITKKEQDIKKATNYIFTEDDVADIVKKKRESGLSQEKVAVRKIRLIEERD 442
Query: 249 MAQSKGDDEEASILQRKIDDLEERANE 275
+A + D E+ L ++I ++++ ++
Sbjct: 443 LALTNNDHEKVVRLDKEIKEIDQDQDQ 469
>gi|50549663|ref|XP_502302.1| YALI0D01892p [Yarrowia lipolytica]
gi|49648170|emb|CAG80488.1| YALI0D01892p [Yarrowia lipolytica CLIB122]
Length = 514
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 88/170 (51%), Gaps = 3/170 (1%)
Query: 140 KIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEV 199
K YSL T N LK+ G E F + + S+ FTE +F++WK C GV+LP+ +
Sbjct: 268 KTYSLEGTTVNFSLKVAFGADEANFEMRYCSDSPFTEEDFVKWKKACEEGGVSLPSVQRL 327
Query: 200 ERKSKEIQNGMMYQWKEEDVEQIVREKERFKP-TPYNYAMKKTQLMKERDMAQSKGDDEE 258
ERK KE++ ++++ +VR + + N +++ L R +A+ +G+++E
Sbjct: 328 ERKHKELKELATRPLTSQEIDDMVRRRSKLSAGRGANAVIERAVLENRRQIAEDQGNEDE 387
Query: 259 ASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIMV 308
+ + ++ +LE A K +S + +N RNR+ N E KA ++
Sbjct: 388 MAKIDEQLAELE--ALNTSKPISSQKDKFAEVNARNRKANQESIRKAELM 435
>gi|299746137|ref|XP_001837760.2| hypothetical protein CC1G_06966 [Coprinopsis cinerea okayama7#130]
gi|298406919|gb|EAU84104.2| hypothetical protein CC1G_06966 [Coprinopsis cinerea okayama7#130]
Length = 571
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 98/190 (51%), Gaps = 12/190 (6%)
Query: 131 EISGVCETG-KIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTE 189
EI G+ K Y + N+ ++L+HG S R F ++ ISN +FT+ EF R C E
Sbjct: 274 EIQGIAPKPVKPYKVNDRLINQAVELKHGQSVREFSMDRISNSDFTQREFDRLVRVCKAE 333
Query: 190 GVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYN--YAMKKTQLMKER 247
GV LPT+ E++ K+ +++ ++D+ +++ K+ + + + +++++L + R
Sbjct: 334 GVTLPTRKELQDKTAQMKKLQDTPLTDQDITFMLKRKKELQSSKSSSELMLERSRLSQAR 393
Query: 248 DMAQSKGDDEEASILQRKIDDLEER---------ANELDKARTSTISSISYINNRNRRKN 298
+A + D +EA+ L+ KI LE + +N KA + +N RNRR N
Sbjct: 394 SLALKRLDHKEAAELEDKIAALEAQINGPSGGTASNSPRKAADDRDEVLRRVNERNRRAN 453
Query: 299 VEEAEKAIMV 308
VE +A +
Sbjct: 454 VESVRRAELA 463
>gi|409078135|gb|EKM78499.1| hypothetical protein AGABI1DRAFT_60711 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 520
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 94/176 (53%), Gaps = 9/176 (5%)
Query: 140 KIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEV 199
K Y + + N+ L+L+HG S RVF ++ +SN F EF RWK+ C +E V LPTK ++
Sbjct: 261 KPYKIDEKMVNQALELKHGKSVRVFPMDKVSNGGFLGKEFERWKNTCESEEVKLPTKRDL 320
Query: 200 ERKSKEIQNGMMYQWKEEDVEQIVREKERFKP--TPYNYAMKKTQLMKERDMAQSKGDDE 257
+ K +++ E D+ ++ K + + + N +++++L R +A + D E
Sbjct: 321 DHKYAQLRKLPSQPITESDINAMLARKSQLQTHKSSGNNTLERSRLNAARALAIRRNDTE 380
Query: 258 EASILQRKIDDLEERANELDKARTS--TISSISYINNRNRRKNVEEAEKAIMVSCC 311
E + +IDD + ++R S ++ ++ +N RNR+ N+E +A +V+
Sbjct: 381 EVA----QIDDQLASLGPI-RSRHSEESVDPLAKVNERNRKANMEAVRQAELVASA 431
>gi|426194136|gb|EKV44068.1| hypothetical protein AGABI2DRAFT_194936 [Agaricus bisporus var.
bisporus H97]
Length = 520
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 94/176 (53%), Gaps = 9/176 (5%)
Query: 140 KIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEV 199
K Y + + N+ L+L+HG S RVF ++ +SN F EF RWK+ C +E V LPTK ++
Sbjct: 261 KPYKIDEKMVNQALELKHGKSVRVFPMDKVSNGGFLGKEFERWKNTCESEEVKLPTKRDL 320
Query: 200 ERKSKEIQNGMMYQWKEEDVEQIVREKERFKP--TPYNYAMKKTQLMKERDMAQSKGDDE 257
+ K +++ E D+ ++ K + + + N +++++L R +A + D E
Sbjct: 321 DHKYAQLRKLPSQPITESDINAMLARKSQLQTHKSSGNNTLERSRLNAARALAIRRNDTE 380
Query: 258 EASILQRKIDDLEERANELDKARTS--TISSISYINNRNRRKNVEEAEKAIMVSCC 311
E + +IDD + ++R S ++ ++ +N RNR+ N+E +A +V+
Sbjct: 381 ELA----QIDDQLASLGPI-RSRHSEESVDPLAKVNERNRKANMEAVRQAELVASA 431
>gi|159470283|ref|XP_001693289.1| Paf1 complex component [Chlamydomonas reinhardtii]
gi|158277547|gb|EDP03315.1| Paf1 complex component [Chlamydomonas reinhardtii]
Length = 656
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 11/206 (5%)
Query: 108 MFYG-SVCDLTSWHIFSSHPQE-IGEISGVCETGKIYSLGKTR--TNKGLKLRHGNS-ER 162
M YG V D H ++HP + EI + E+G+ Y G TNK L LR G R
Sbjct: 313 MAYGPGVRD----HAGNTHPGYLVMEIMDIKESGRAYKFGPKSEMTNKHLVLRDGMGINR 368
Query: 163 VFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQI 222
+ +S++ F E E+ R+K C A T++E +K Q M Y+W D++
Sbjct: 369 TMAMANVSSKPFDEQEYERYKRHCSKTNRAPITREEAAEATKRKQAAMNYRWTSADLKVE 428
Query: 223 VREKERFKPTPYNYAMKKTQLMKERDMAQSKGDDEEASILQRKIDDLEERANELDKARTS 282
+ K + P N A +K L + ++AQ +G+ +E + L+ ++ LE A+ +++
Sbjct: 429 LERKRAQRAAPVNPAAEKAMLKRRLELAQGQGNADEVAALEEQLASLE--AHLINQTNNQ 486
Query: 283 TISSISYINNRNRRKNVEEAEKAIMV 308
+ IN RN++ N+ A K
Sbjct: 487 RAFGMMDINKRNKQHNLAVAYKTTAA 512
>gi|392590321|gb|EIW79650.1| plus-3-domain-containing protein [Coniophora puteana RWD-64-598
SS2]
Length = 556
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 96/186 (51%), Gaps = 4/186 (2%)
Query: 129 IGEISGVC-ETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCM 187
I EISG+ K Y + T ++ ++L+HG S R F ++ +SN +F E E+ R K C+
Sbjct: 260 ICEISGLAMNLTKPYKINDTLIDRAIELKHGKSVRAFNMDKVSNSDFPEKEWDRLKYACL 319
Query: 188 TEGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYA---MKKTQLM 244
T+ VA+PT+ +E+K +++ + + + D+ ++ K + + A M++++L
Sbjct: 320 TDHVAMPTRRAIEKKKEQMARLVSQRMTDSDITAMLARKNQLSSGVQSAAAITMERSRLN 379
Query: 245 KERDMAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEK 304
+ R +A + D E + + K+ L E A + + +N RNR+ N+E K
Sbjct: 380 QARTLALRRQDAVEVAEIDVKLAALPEVAATRVAEEDDLAARLLKVNERNRKANMEAVRK 439
Query: 305 AIMVSC 310
A ++
Sbjct: 440 AELLEA 445
>gi|194877822|ref|XP_001973951.1| GG21358 [Drosophila erecta]
gi|190657138|gb|EDV54351.1| GG21358 [Drosophila erecta]
Length = 427
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 80/143 (55%), Gaps = 2/143 (1%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
I EI + + + Y +G RTN L LR+G+ +R R++ +SNQ T+ EF+ W + +
Sbjct: 134 IYEIIDLHQDREDYRVGSKRTNLVLILRYGSEKRDSRIDVVSNQPITQKEFLLWLSKNLR 193
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
+ LPT +V +K +++ + E DVE++ + +R N A +K +L+ ERD
Sbjct: 194 DRQILPTLLDVGKKQVQMKEACENSYTEADVEKL--QNKRKAGLMQNAAYRKIRLIIERD 251
Query: 249 MAQSKGDDEEASILQRKIDDLEE 271
MA D E+ +L++KI ++E
Sbjct: 252 MAAGIHDAEKVQVLEKKIQAIDE 274
>gi|384501107|gb|EIE91598.1| hypothetical protein RO3G_16309 [Rhizopus delemar RA 99-880]
Length = 524
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 96/167 (57%), Gaps = 4/167 (2%)
Query: 140 KIYSLGK-TRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDE 198
K Y +G+ T NK +KL+HG +E+ F ++ +SNQ ++ E+ R+ + + +P+ +
Sbjct: 264 KTYKIGENTWCNKAIKLKHGKAEKAFPMDIVSNQPVSQQEYSRFLSTLEYDRIRVPSIKQ 323
Query: 199 VERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERDMAQSKGDDEE 258
+ +K ++I+N Y +++V +++ +K K + N A++K QL+ + A+S + ++
Sbjct: 324 INQKVEDIKNAREYVLNDKEVNEMIEKKRSVKGSSTNAALEKAQLIARLEHAKSNNEIDQ 383
Query: 259 ASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKA 305
L +++ +LEER + + + + IN+RNR ++ EA +A
Sbjct: 384 VLKLTKELKELEERTFNAEDQKQNVWAG---INSRNRERDRIEAHEA 427
>gi|389746244|gb|EIM87424.1| plus-3-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 541
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 96/183 (52%), Gaps = 11/183 (6%)
Query: 129 IGEISGVC-ETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCM 187
I EIS + + K Y + ++ L+L+HG + + F ++ +SN FT EF R C
Sbjct: 260 ICEISNLAVDLAKPYKINDQLIDQNLELKHGTAVKAFPMDKVSNAVFTAREFERLLKTCE 319
Query: 188 TEGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREK----ERFKPTPYNYA---MKK 240
E V LP K +VE+K+ +IQ E DV ++ K ER P+ A ++K
Sbjct: 320 GENVKLPLKRQVEKKAMQIQKLTSQPLTESDVSAVLLRKSQIQERANPSSKTNAARLLEK 379
Query: 241 TQLMKERDMAQSKGDDEEASILQRKIDDLEE--RANELDKARTSTISSI-SYINNRNRRK 297
T++++ R++A + D E ++L ++++++ A+ K R ++ I + +N RNR+
Sbjct: 380 TRIIQMRNLAMKRNDRAEVAVLDKQLEEILATIAADPNFKEREPEVADIMAKVNERNRKA 439
Query: 298 NVE 300
N E
Sbjct: 440 NQE 442
>gi|340939471|gb|EGS20093.1| RNA polymerase-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 689
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 70/119 (58%), Gaps = 4/119 (3%)
Query: 153 LKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEVERKSKEIQNGMMY 212
+K HG ++R + SN +FTE+EF R+K C+ EGV PTKDE+ K +I + Y
Sbjct: 379 VKAAHGKAQRDWPFISCSNNKFTEAEFNRYKQVCLAEGVPFPTKDELISKIDDINRMVNY 438
Query: 213 QWKEEDVEQIVREKERFKPTPYNYA-MKKTQLMKERDMAQSKGDDEEASILQRKIDDLE 270
W +E++ + +R R + Y ++ + K+ ++A+++GD+E + LQ ++D LE
Sbjct: 439 VWTDEELNEKLR---RVREMHAKYGPFQREAVQKQLELARARGDEEAVARLQERLDSLE 494
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 339 ELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNN--TGIPLYRVS 384
++ R+R+ R + P+F Q +IGCFVRI IG + T +YR++
Sbjct: 305 DIERVRVGRSRFADYCFHPLFEQAMIGCFVRINIGPDPATRQEVYRMA 352
>gi|195443328|ref|XP_002069369.1| GK18719 [Drosophila willistoni]
gi|194165454|gb|EDW80355.1| GK18719 [Drosophila willistoni]
Length = 417
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 79/158 (50%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
I +I G+ + + Y LG T+ LKLR+ +++ +SNQ T+ EF W C
Sbjct: 150 ISQIVGLEHSKREYRLGSQNTSFILKLRNAGQYVYSQMDVVSNQPVTQHEFDVWIGACQR 209
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
E LP +E K K I+ Y + E ++E+I++ K + + A +K L+ ERD
Sbjct: 210 EACPLPQLAIIEEKQKAIKEASNYSFTEREIEKIIQSKLKDGKKKVSTACQKVCLIMERD 269
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISS 286
MA D + A+ L++KI +E+ + + R I S
Sbjct: 270 MAVDWNDLKTANRLEKKIRTMEQNSEPEREQRVRPIGS 307
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 10/58 (17%)
Query: 334 IETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIP------LYRVSE 385
+ T EL R L+R ++E + PIFG+ + CFVR+ N G+P +YR+S+
Sbjct: 99 VSTLNELRRAVLTRSQLESFLDKPIFGETITNCFVRV----NVGLPGIHMNQVYRISQ 152
>gi|342319917|gb|EGU11862.1| Pol II transcription elongation factor [Rhodotorula glutinis ATCC
204091]
Length = 587
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 90/175 (51%), Gaps = 12/175 (6%)
Query: 131 EISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEG 190
++ GV E + Y +T+ L+L+HG +ER+F +E +SN E++RW QC +
Sbjct: 326 QVVGV-EPDRPYRFEGVQTDLWLRLKHGKAERLFGMEAVSNSPIDSHEWVRWTKQCTADE 384
Query: 191 VALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERDMA 250
V T + ++ +++ Y EED+ + +K R +P A + +L +RD A
Sbjct: 385 VPATTPVQAKKIKEQLGKHTSYTLTEEDLAAELAKKNR-QP---GGAAARVRLKMQRDHA 440
Query: 251 QSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKA 305
GD E+A+ L ++ +LE A + D RT IN+RNR N EE ++A
Sbjct: 441 MQNGDVEKAAELSAQLAELEGPAVD-DADRT------KRINDRNRAANREEVKRA 488
>gi|392560249|gb|EIW53432.1| plus-3-domain-containing protein [Trametes versicolor FP-101664
SS1]
Length = 526
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 92/181 (50%), Gaps = 12/181 (6%)
Query: 135 VCETGKI-------YSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCM 187
+CE I Y + N+ L+L+HG S R F ++ +SN F + EF R C
Sbjct: 258 ICEVADIAPNLVKPYKINDQTVNQELELKHGESTRRFAMDKVSNAPFEQKEFERLVKVCE 317
Query: 188 TEGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERF---KPTPYNYAMKKTQLM 244
E V LPTK ++ERK+ +++ Q E D+ ++ K+ K + AM++++LM
Sbjct: 318 AEKVKLPTKRQIERKAAQLEKLANQQMTESDIAAMLARKQTMQTSKQSGIAMAMERSRLM 377
Query: 245 KERDMAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEK 304
+ R +A + D E + + ++ +L A E + +S+ ++ +N RNR+ N + K
Sbjct: 378 QARTLAVRRQDYTEVAEIDAQLGELAP-ARESQREESSS-DVLARLNERNRKANQDAVRK 435
Query: 305 A 305
A
Sbjct: 436 A 436
>gi|116201563|ref|XP_001226593.1| hypothetical protein CHGG_08666 [Chaetomium globosum CBS 148.51]
gi|88177184|gb|EAQ84652.1| hypothetical protein CHGG_08666 [Chaetomium globosum CBS 148.51]
Length = 590
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 92/168 (54%), Gaps = 15/168 (8%)
Query: 153 LKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEVERKSKEIQNGMMY 212
+K HG ++R + S+++FTE E+ R+K C++EGV +PTK E+ K +I N +
Sbjct: 343 IKAAHGKAQREWPFITCSDRDFTEGEWNRYKQVCLSEGVPIPTKPELVAKIGDINNLIGR 402
Query: 213 QWKEEDVEQIVREKERFKPTPYNYA-MKKTQLMKERDMAQSKGDDEEASILQRKIDDLE- 270
W + +V + ++ + Y+ +++ QL ++ D+A+++GD+ S LQ K+D+LE
Sbjct: 403 SWTDLEVSEKLKRQNALH---IKYSGVERDQLARQLDIARARGDEAAVSRLQEKLDNLEV 459
Query: 271 ---------ERANELDKARTSTIS-SISYINNRNRRKNVEEAEKAIMV 308
+ + ++ R T ++ +N NRRKN E KA ++
Sbjct: 460 PRLAFRTTLNSSKKKNENRGPTQQEKLALLNAENRRKNAESVRKAQLL 507
>gi|395324260|gb|EJF56704.1| plus-3-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 548
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 89/173 (51%), Gaps = 8/173 (4%)
Query: 138 TGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKD 197
T K Y + N+ L+L+HG S R F ++ ISN F E EF R + C TE V LP +
Sbjct: 269 TVKPYKVNDQLVNQELELKHGGSTRRFAMDKISNGPFEEKEFERLQKTCETEKVKLPMRR 328
Query: 198 EVERKSKEIQNGMMYQWKEEDVEQIVREKERF----KPTPYNYAMKKTQLMKERDMAQSK 253
++E+K+ ++Q E D+ I++ K + + M++++L + R +A +
Sbjct: 329 QLEKKTAQLQKLANQPMTESDIAAILQRKRDINVSVNKSSTSLTMERSRLQQARTLAIRR 388
Query: 254 GDDEEASILQRKIDDLEERANELDKARTSTISS--ISYINNRNRRKNVEEAEK 304
D E + + K+ +L+ AN + R SS ++ +N RNRR N E+ K
Sbjct: 389 QDFAEVAQIDAKLAELQ--ANAPVRGREEEGSSDILAKLNERNRRLNQEQVRK 439
>gi|195117039|ref|XP_002003058.1| GI17712 [Drosophila mojavensis]
gi|193913633|gb|EDW12500.1| GI17712 [Drosophila mojavensis]
Length = 457
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 52/98 (53%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ I V T + Y LG RT L+L+HG FR++ ISNQ ++EF+ W D C
Sbjct: 211 LSRIVAVEHTDQEYVLGNHRTKVKLQLKHGRHLHSFRMDGISNQPVLDNEFLLWLDACQR 270
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREK 226
LP+ + + RK K+I+ + Y E D E +V+ K
Sbjct: 271 VAQPLPSVNSINRKEKDIERALNYCLTEGDAELMVQTK 308
>gi|393244359|gb|EJD51871.1| plus-3-domain-containing protein [Auricularia delicata TFB-10046
SS5]
Length = 525
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 91/182 (50%), Gaps = 16/182 (8%)
Query: 135 VCETGKI------YSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+CE KI YS+ + + ++L+HG + R F +E +SN FT+ EF R C
Sbjct: 249 ICEALKIGEIIKPYSVEGNQVIESVELKHGQAIREFTMERVSNVPFTDKEFDRLTRTCAL 308
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREK---ERFKPT-PYNYAMKKTQLM 244
E V LP++ ++ERK EI+ D++ ++ K +R P+ P++ A + L+
Sbjct: 309 EKVKLPSRRDIERKQAEIKRLTSQPRTNADIDYQLKRKAQIDRLLPSRPWDPAKEYAHLL 368
Query: 245 KERDMAQSKGDDEEASILQRKIDDLEERANEL----DKARTSTISS--ISYINNRNRRKN 298
K D+A + D EE LQ + + EE+ L + R S + ++ IN RN+ N
Sbjct: 369 KRHDLAFQRKDREETKNLQAALREFEEKHPNLKERYKRERESDDNEDLMARINKRNKLAN 428
Query: 299 VE 300
E
Sbjct: 429 EE 430
>gi|195475844|ref|XP_002090193.1| GE12937 [Drosophila yakuba]
gi|194176294|gb|EDW89905.1| GE12937 [Drosophila yakuba]
Length = 435
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 76/148 (51%), Gaps = 3/148 (2%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
I EI + + K Y +G TN L LR G+ +R R++ +SNQ T+ EF+ W +
Sbjct: 141 IYEIIDLNQDRKDYQVGSKHTNLLLTLRCGSEKRFSRIDVVSNQPITQKEFLLWLATNLR 200
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
+ LP ++ +K +I+ Y + E DVE+ ++ K R N +K L+ ER+
Sbjct: 201 DRHILPKLSDIAKKQMQIKEACKYNFPEADVEKHIQTK-RKAGLKQNAVYRKICLILERE 259
Query: 249 MAQSKGDDEEASILQRKID--DLEERAN 274
MA K D + L+++I D E RA+
Sbjct: 260 MAAGKDDVGKVQALEKEIQEIDKEHRAH 287
>gi|367040993|ref|XP_003650877.1| hypothetical protein THITE_2110787 [Thielavia terrestris NRRL 8126]
gi|346998138|gb|AEO64541.1| hypothetical protein THITE_2110787 [Thielavia terrestris NRRL 8126]
Length = 634
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 83/167 (49%), Gaps = 13/167 (7%)
Query: 153 LKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEVERKSKEIQNGMMY 212
+K HG ++R + S+ FTE+E+ R+K C++EGV +P+K E+ K +I +
Sbjct: 345 VKAAHGKAQREWPFISCSDHRFTEAEWNRYKQVCLSEGVPVPSKPELVDKIDDINGLLQR 404
Query: 213 QWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERDMAQSKGDDEEASILQRKIDDLE-- 270
W E++V + +R + + L ++ +MA ++GD E A LQ ++D+LE
Sbjct: 405 TWTEQEVTEKLRRQNAL--LAKFSGADRDHLTRQLEMALARGDQEAAKRLQERLDNLETP 462
Query: 271 ---------ERANELDKARTSTISSISYINNRNRRKNVEEAEKAIMV 308
+L+ + ++ +N NRR+N E KA ++
Sbjct: 463 RLAFRTSLHPEKKKLESRGPTQQEKLAMLNAENRRRNAEAVRKAQLM 509
>gi|403415141|emb|CCM01841.1| predicted protein [Fibroporia radiculosa]
Length = 544
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 93/184 (50%), Gaps = 7/184 (3%)
Query: 129 IGEISGV-CETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCM 187
I E+S + E K Y + ++ L+L+HG S + F ++ +SN F + EF R
Sbjct: 261 ICEVSNLGTEVVKPYKVNDQTVDQQLELKHGVSTKCFHMDKVSNSRFEQKEFDRLSRTFE 320
Query: 188 TEGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKP------TPYNYAMKKT 241
E + LP+K ++E+K+ +I M + E D+ IV K++ + +P A+++
Sbjct: 321 HEKLKLPSKRQLEKKAAQIIKFMNQRLTESDISAIVARKKQLQSGQTVQQSPAALALERA 380
Query: 242 QLMKERDMAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEE 301
+L + R +A + D +E + + +++ L A + S ++ +N RNR+ N+E
Sbjct: 381 RLAQARTLAGRRQDWDEVAAIDLELEALNATAPVVPPRDVSRADILARVNERNRKANMEA 440
Query: 302 AEKA 305
+A
Sbjct: 441 VRRA 444
>gi|255087190|ref|XP_002505518.1| PAF1 complex protein [Micromonas sp. RCC299]
gi|226520788|gb|ACO66776.1| PAF1 complex protein [Micromonas sp. RCC299]
Length = 604
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 101/214 (47%), Gaps = 16/214 (7%)
Query: 129 IGEISGVCE-TGKIYSL----------GKTRTNKGLKLRHGNSERVFRLEFISNQEFTES 177
+GEI GV E K Y+L GK TNK L LR+G ER F + +SN T++
Sbjct: 258 LGEIVGVAEGKHKAYNLKEYEYPHKGSGKW-TNKWLLLRYGRDERAFMIAEVSNSPVTDA 316
Query: 178 EFIRWKDQCMTEGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREK-ERFKPTPYNY 236
E+ W+ Q +GV P ++ I+ Y++ ED+++++ ++ E+ N
Sbjct: 317 EYGAWRAQLEKDGVKFPQLRDINAAQSNIKAAQDYRYTSEDIQKMLSKRAEKRLGLQQNL 376
Query: 237 AMKKTQLMKERDMAQSKGDDEEASILQRKIDDLEERAN-ELDKARTSTISSISYINNRNR 295
A +K + + + A+ GDDE + L+ ++ + E+ LDK T+ + ++ IN +N
Sbjct: 377 ASQKENIRRLIERAKMDGDDEAVANLEEQMAQVMEKLKVRLDKGGTAEM--MAAINKKNN 434
Query: 296 RKNVEEAEKAIMVSCCCCCSGFSYRSVKSSASRK 329
N + SG + +S SR+
Sbjct: 435 AVNDANLSRIASEQVARAKSGAADQSANDPFSRR 468
>gi|171677973|ref|XP_001903937.1| hypothetical protein [Podospora anserina S mat+]
gi|170937055|emb|CAP61714.1| unnamed protein product [Podospora anserina S mat+]
Length = 534
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 100/189 (52%), Gaps = 27/189 (14%)
Query: 138 TGKIYSLGKTRTNKGL-----KLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVA 192
TG+ Y++ + ++ + K+ HG++ R + S++ FTESE+ R+K C+ G++
Sbjct: 262 TGRPYAMPDSSGHQMVVDLYVKVAHGDAVREWPFISCSDRNFTESEWNRYKQVCLQAGIS 321
Query: 193 LPTKDEVERKSKEIQNGMMYQWKEEDV-EQIVREK---ERFKPTPYNYAMKKTQLMKERD 248
+PTK ++ K +I + ++W E+++ E++ R+ ++F T ++ L ++ +
Sbjct: 322 VPTKTQLVNKISDINGLVRHKWTEQEIAEKLKRQNSLMQKFSST------ERDNLTRQLE 375
Query: 249 MAQSKGDDEEASILQRKIDDL-------EERANELDKART-----STISSISYINNRNRR 296
A+++GD++ LQ+K++DL DK R + ++ +N NRR
Sbjct: 376 AARARGDEDAVDSLQKKLEDLSTPKLAFRTSLTSADKKRPEGKGLTQQEKLALLNAENRR 435
Query: 297 KNVEEAEKA 305
+N EE KA
Sbjct: 436 RNAEEVRKA 444
>gi|409047625|gb|EKM57104.1| hypothetical protein PHACADRAFT_254665 [Phanerochaete carnosa
HHB-10118-sp]
Length = 522
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 83/169 (49%), Gaps = 4/169 (2%)
Query: 142 YSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEVER 201
Y + + N+ L LRHG SE+ F + ISN T+ E+ R C E V LPT+ EV +
Sbjct: 271 YKINEQPANQELILRHGVSEKSFPMNMISNSNVTDKEWNRVVRVCEAENVKLPTQHEVNK 330
Query: 202 KSKEIQNGMMYQWKEEDVEQIVREKERF--KPTPYNYAMKKTQLMKERDMAQSKGDDEEA 259
K +I+ E D+ ++ K + K ++K++L + R +A + D E
Sbjct: 331 KFLQIKKLTSQALTEADISVMITRKTQMNKKQNAAQITLEKSRLNQARTLALRRNDLVEV 390
Query: 260 SILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIMV 308
+ + K+ L + R+S ++ +N RNR+ N+E A KA M+
Sbjct: 391 ADIDAKLIALT--GETTARPRSSQADELARLNERNRKANIEAARKADML 437
>gi|348670555|gb|EGZ10376.1| hypothetical protein PHYSODRAFT_519762 [Phytophthora sojae]
Length = 770
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 88/172 (51%), Gaps = 1/172 (0%)
Query: 131 EISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEG 190
E+ VC+ + Y+ TN G+ G S+R ++L +S E EF+ W+ E
Sbjct: 406 EVVNVCKLARSYTFCGETTNTGIICAFGKSKREWKLSGVSGHSLREREFLLWRAVMNKER 465
Query: 191 VALPTKDEVER-KSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERDM 249
+ PT EV+R SK+ + + + E +V+++VR K+ + + +++ +L ++
Sbjct: 466 LHFPTHHEVKRLYSKKEKMITQHNYTEAEVDEMVRRKQAVGLSTVSLGVQRVRLERDLRA 525
Query: 250 AQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEE 301
AQ + E+A +L+ ++ L + E K + + I+ IN RNR N+++
Sbjct: 526 AQDMKNFEKAVVLEERLQKLLAKNEERKKHNSDDVLRINEINRRNREANIQQ 577
>gi|330819095|ref|XP_003291600.1| hypothetical protein DICPUDRAFT_156220 [Dictyostelium purpureum]
gi|325078202|gb|EGC31866.1| hypothetical protein DICPUDRAFT_156220 [Dictyostelium purpureum]
Length = 621
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 101/202 (50%), Gaps = 6/202 (2%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
I EI V K+Y + T+K L L + S + F +E +SN T++E +W +
Sbjct: 306 IAEIVEVRRGHKLYKVENKETDKLLLLSYAGSCKEFGIENVSNNVITQAEHEKWISDMIR 365
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
LPT + +E+K +I+ Y + ED+E+ +E+ +++ TP+N A +K +L+ R+
Sbjct: 366 SEKKLPTPESIEKKIGDIKKAQEYIYTNEDIEKRAQERMKYQKTPHNIAFEKAKLIALRE 425
Query: 249 MAQSKGDDEEASILQRKIDDLEERANEL-DKARTSTISSISYINNRNRRKNVEEAEKAIM 307
D E +I++L + A E +++ T T +S IN +N+ N + ++ A
Sbjct: 426 TLDV--DSTEYKTTVERIEELNKLATEQKEESMTETEKLVSLINKKNKSLNFQYSQSAGT 483
Query: 308 VSCCCCCS---GFSYRSVKSSA 326
+ + F+ R +S+A
Sbjct: 484 STQEIVSNEFDPFARRKTRSNA 505
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 340 LNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
+N RLSR + K V P F + G FVR+ IG++ P+YR++E
Sbjct: 263 MNHCRLSRNMLVKWVDQPYFETLAPGFFVRVVIGSHLNSPIYRIAE 308
>gi|145356861|ref|XP_001422642.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582885|gb|ABP00959.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 576
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 95/183 (51%), Gaps = 9/183 (4%)
Query: 131 EISGVCETG-KIYSL-------GKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRW 182
EI+GV + K YSL K T K L LR G SE+ FRL +SN + ++E+ W
Sbjct: 227 EIAGVADGKYKQYSLKKYEYLANKPPTQKWLILRWGKSEKTFRLSEVSNSDVQDAEWKAW 286
Query: 183 KDQCMTEGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQ 242
C G T +V++ + ++ Y++ +DV +I+ EK + T +N +K Q
Sbjct: 287 VAHCAQAGCTPITARDVKKCLQGLEEAKNYRYTSDDVTKILAEKREKQGTRHNLLFEKEQ 346
Query: 243 LMKERDMAQSKGDDEEASILQRKIDDLE-ERANELDKARTSTISSISYINNRNRRKNVEE 301
+ A+++ D ++ L+++ D+++ E ++L + ST +++ IN RN +N E+
Sbjct: 347 IKAAIAHAEAENDLDKVEELRQRFDEVDREIKDKLQQRSGSTQDALANINRRNEIQNSEK 406
Query: 302 AEK 304
K
Sbjct: 407 LSK 409
>gi|384252408|gb|EIE25884.1| hypothetical protein COCSUDRAFT_64884 [Coccomyxa subellipsoidea
C-169]
Length = 633
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 82/158 (51%), Gaps = 2/158 (1%)
Query: 149 TNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEVERKSKEIQN 208
TNK L ++HG S+R + +SN++FTE E+ +W QC + + +V+ +
Sbjct: 344 TNKWLLMQHGTSQRYMPIALVSNKKFTEDEWRKWHTQCEKDNRPQLSTGDVQSAVARFKQ 403
Query: 209 GMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERDMAQSKGDDEEASILQRKIDD 268
+ Y + EDV++++ EK N A++K +L + RD A + D EEA L +I +
Sbjct: 404 ALTYTYTAEDVQRMIEEKRARGTFGRNSAVEKARLERLRDAAMDQEDLEEAQRLSDQIAE 463
Query: 269 LEERANELDKARTSTISSISYINNRNRRKNVEEAEKAI 306
LE A E R + ++ +N RN +N E A K +
Sbjct: 464 LEAAAAERAAERRNV--GMASVNRRNTNRNFENAFKNV 499
>gi|367030425|ref|XP_003664496.1| hypothetical protein MYCTH_2134860 [Myceliophthora thermophila ATCC
42464]
gi|347011766|gb|AEO59251.1| hypothetical protein MYCTH_2134860 [Myceliophthora thermophila ATCC
42464]
Length = 596
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 115/248 (46%), Gaps = 39/248 (15%)
Query: 153 LKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEVERKSKEIQNGMMY 212
+K HG ++R + S++ FTE+E+ R+K C++EG+ +PTK E+ K +I +
Sbjct: 346 VKAAHGKAQREWPFITCSDKAFTEAEWNRYKQVCLSEGIPVPTKPELVAKIADINGLIER 405
Query: 213 QWKEEDVEQIVREKERFKPTPYNYA-MKKTQLMKERDMAQSKGDDEEASILQRKIDDLE- 270
W +++V + ++ + Y+ +++ + K+ ++A+++GD+ + LQ K+D+LE
Sbjct: 406 TWTDQEVSEKLKRQNALH---IKYSGIERDNVAKQLELARARGDEAAVARLQEKLDNLEV 462
Query: 271 ------ERANELDKAR----TSTISSISYINNRNRRKNVEEAEKAIMV------------ 308
+ N K + ++ +N NRRKN E KA ++
Sbjct: 463 PRLAFRTQLNSTKKRAENRGPTQQEKLAMLNAENRRKNAEAVRKAQLLERARAREAEARR 522
Query: 309 --------SCCCCCSGFSYRSVKSSASRKVIEYIETKEELNRIRLSRFKME-KLVHLPIF 359
+ SG + K+ S +++ +I +E R S+ K ++H P+
Sbjct: 523 AAEGSGVSTPVANGSGSGSGTPKAGHSAELLPHIAKLQEQQR---SQAKAGVPVIHKPLM 579
Query: 360 GQIVIGCF 367
+IG
Sbjct: 580 DDDIIGAL 587
>gi|356505080|ref|XP_003521320.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Glycine
max]
Length = 644
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 85/172 (49%), Gaps = 8/172 (4%)
Query: 135 VCETGKIYSLGKTRTNKGLKLRHGNSERVFR--LEFISNQEFTESEFIRWKDQCMTEGVA 192
+ + Y L T+K L L GN R + ISN E EFI+W + G
Sbjct: 316 ATDRARQYKLENKTTHKYLNLVWGNETSAARWQMAMISNSPPKEEEFIQWVKEVERRGGR 375
Query: 193 LPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERDMAQS 252
+PTK EV K + I ++ + V+Q+++EK+ K P N A +K +L E ++A S
Sbjct: 376 MPTKQEVAEKKEAILKTNLFVYSAATVKQMLQEKKSAKTRPLNIAAEKDRLRTELEIAHS 435
Query: 253 KGDDEEASILQRKIDDLEE--RANELDKARTSTISSISYINNRNRRKNVEEA 302
K E + ++++LEE +A +D AR ++ +N +NR +N + A
Sbjct: 436 KNSKAEVKRIMTRLEELEESRKAKRMD-ARALKLAE---MNRKNRFENFKNA 483
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 27/46 (58%)
Query: 338 EELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRV 383
E++ I + R K+ K P F +++ CFVR+GIG P+YR+
Sbjct: 263 EDIKEITIRRSKLAKWFMEPFFEELIADCFVRVGIGRPKSGPIYRL 308
>gi|402223878|gb|EJU03942.1| plus-3-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 523
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 90/171 (52%), Gaps = 12/171 (7%)
Query: 135 VCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALP 194
E+ Y + T N+ L+HG S + F ++ ISN FT+ EF R QC T+ V LP
Sbjct: 266 TAESPVTYKIQDTVFNQQALLKHGKSTKPFNMDRISNSPFTDREFDRLVAQCKTDNVELP 325
Query: 195 TKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERF--KPTPYNYAMKKTQLMKERDMAQS 252
++ ++E K+ +++ ++++ Q+++ K K + +K++L +ER +A +
Sbjct: 326 SRADIEAKAIKLEEYRHKVPTDQEITQMIKRKAGMSGKKDAHQAKAEKSRLHQERALALA 385
Query: 253 KGDDEEASILQRKIDDL---EERANELDKARTSTISSISYINNRNRRKNVE 300
+ + E +++D L +ERA+ A T + + +N RNR+ N+E
Sbjct: 386 RHNLAEV----QRLDTLTLAQERAS---PAPTVMEDTFAKVNERNRKANIE 429
>gi|255555987|ref|XP_002519028.1| RNA polymerase-associated protein RTF1, putative [Ricinus communis]
gi|223541691|gb|EEF43239.1| RNA polymerase-associated protein RTF1, putative [Ricinus communis]
Length = 660
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 90/187 (48%), Gaps = 6/187 (3%)
Query: 135 VCETGKIYSLGKTRTNKGLKLRHGNSERVFR--LEFISNQEFTESEFIRWKDQCMTEGVA 192
+ + Y L T K L + GN R + IS+ TE E+ +W + G
Sbjct: 327 AADPDRPYKLENKTTYKYLNVIWGNESSAARWQMAMISDSAPTEDEYKQWVREVERSGGR 386
Query: 193 LPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERDMAQS 252
+PTK ++ K + I+ + + V+Q+++EK+ P N A +K +L +E ++AQS
Sbjct: 387 MPTKQDILEKKEAIRKSNTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEVAQS 446
Query: 253 KGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAE--KAIMVSC 310
K DD E ++ +I +LE A+ + + + ++ +N +NR +N A K + S
Sbjct: 447 KQDDAEVERIRARIQELE--ASRQTQGKDAKAIRLAEMNRKNRAENFRNASELKPVNTSL 504
Query: 311 CCCCSGF 317
+G+
Sbjct: 505 KAGEAGY 511
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 31/48 (64%)
Query: 336 TKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRV 383
T +++ I + R K+ K P F ++++GCFVR+GIG + P+YR+
Sbjct: 272 TFDDIREITIRRSKLAKWFMEPWFEELIVGCFVRVGIGRSKSGPIYRL 319
>gi|336385692|gb|EGO26839.1| hypothetical protein SERLADRAFT_464355 [Serpula lacrymans var.
lacrymans S7.9]
Length = 478
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 96/200 (48%), Gaps = 10/200 (5%)
Query: 113 VCDLTS-W--HIFSSHPQEI-GEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEF 168
+C++ S W H+++ H I ++S K Y + N+ L+HG S + F +E
Sbjct: 182 LCEIQSTWYGHMYTVHVISIVKDLS--ANLVKPYKINDKTVNQSFDLKHGKSVKSFTMEK 239
Query: 169 ISNQEFTESEFIRWKDQCMTEGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKER 228
+SN F EF R C E LP++ +E+KS ++ + E D+ ++ K +
Sbjct: 240 VSNAPFDMKEFERLTKTCAAEETKLPSRRHLEKKSAQLARLITQPVTESDINAMLARKSQ 299
Query: 229 FKPTPYNYA---MKKTQLMKERDMAQSKGDDEEASILQRKIDDLEERANELDKARTSTIS 285
+ ++ M++++L + R +A + D E + + K+ +L N ++ T
Sbjct: 300 LQANKHSAGWITMERSRLTQARTLALRRQDYSEVADIDAKLAELPLPVNVREEEGTLN-D 358
Query: 286 SISYINNRNRRKNVEEAEKA 305
++ +N RNR+ N+E KA
Sbjct: 359 RLAKVNERNRKANLEAIRKA 378
>gi|15219855|ref|NP_176299.1| plus-3 domain-containing protein [Arabidopsis thaliana]
gi|12323334|gb|AAG51642.1|AC018908_8 unknown protein; 78902-80833 [Arabidopsis thaliana]
gi|332195649|gb|AEE33770.1| plus-3 domain-containing protein [Arabidopsis thaliana]
Length = 643
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 93/198 (46%), Gaps = 9/198 (4%)
Query: 135 VCETGKIYSLGKTRTNKGLKLRHGNSERVFR--LEFISNQEFTESEFIRWKDQCMTEGVA 192
+ K Y L T+K L + GN R + IS+ E E+ +W +
Sbjct: 318 ATDPDKTYKLENKTTHKYLNVVWGNETSAARWQMAMISDGHPLEEEYRQWIREVERTNGR 377
Query: 193 LPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERDMAQS 252
+PTK ++ K + IQ + + E V+Q+++EK+ P N A +K +L KE ++AQS
Sbjct: 378 MPTKQDISEKKEAIQRTNSFVYSAETVKQMLQEKKSASVRPMNVAAEKDRLRKELEIAQS 437
Query: 253 KGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAE--KAIMVSC 310
K D+ ++ KI L+ N+ K ++ +N +NR +N + A K+I S
Sbjct: 438 KNDEAGVERIKSKIKQLDASRNK--KGVDKKALKLAEMNKKNRAENFKNASEVKSITASL 495
Query: 311 CCCCSG---FSYRSVKSS 325
+G FS R +SS
Sbjct: 496 KAGEAGYDPFSRRWTRSS 513
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 33/50 (66%)
Query: 334 IETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRV 383
+ T E++ + + R K+ K + P F ++++GCFVR+GIG + P+YR+
Sbjct: 261 VPTFEDVKEVTIRRSKLAKWLMEPFFEELIVGCFVRVGIGRSKSGPIYRL 310
>gi|20147193|gb|AAM10312.1| At1g61040/T7P1_17 [Arabidopsis thaliana]
Length = 643
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 93/198 (46%), Gaps = 9/198 (4%)
Query: 135 VCETGKIYSLGKTRTNKGLKLRHGNSERVFR--LEFISNQEFTESEFIRWKDQCMTEGVA 192
+ K Y L T+K L + GN R + IS+ E E+ +W +
Sbjct: 318 ATDPDKTYKLENKTTHKYLNVVWGNETSAARWQMAMISDGHPLEEEYRQWIREVERTNGR 377
Query: 193 LPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERDMAQS 252
+PTK ++ K + IQ + + E V+Q+++EK+ P N A +K +L KE ++AQS
Sbjct: 378 MPTKQDISEKKEAIQRTNSFVYSAETVKQMLQEKKSASVRPMNVAAEKDRLRKELEIAQS 437
Query: 253 KGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAE--KAIMVSC 310
K D+ ++ KI L+ N+ K ++ +N +NR +N + A K+I S
Sbjct: 438 KNDEAGVERIKSKIKQLDASRNK--KGVDKKALKLAEMNKKNRAENFKNASEVKSITASL 495
Query: 311 CCCCSG---FSYRSVKSS 325
+G FS R +SS
Sbjct: 496 KAGEAGYDPFSRRWTRSS 513
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 33/50 (66%)
Query: 334 IETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRV 383
+ T E++ + + R K+ K + P F ++++GCFVR+GIG + P+YR+
Sbjct: 261 VPTFEDVKEVTIRRSKLAKWLMEPFFEELIVGCFVRVGIGRSKSGPIYRL 310
>gi|308811050|ref|XP_003082833.1| Paf1/RNA polymerase II complex, RTF1 component (involved in
regulation of TATA box-binding protein) (ISS)
[Ostreococcus tauri]
gi|116054711|emb|CAL56788.1| Paf1/RNA polymerase II complex, RTF1 component (involved in
regulation of TATA box-binding protein) (ISS)
[Ostreococcus tauri]
Length = 430
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 95/184 (51%), Gaps = 10/184 (5%)
Query: 131 EISGVCETG-KIYSL-------GKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRW 182
EISGV E K YSL K TN L L+ G SE+ FR+ ISN ++E+ +W
Sbjct: 82 EISGVAEGKYKQYSLKPYAYVKDKPPTNVWLVLKWGQSEKTFRISEISNSATQDNEWSQW 141
Query: 183 KDQCMTEGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREK-ERFKPTPYNYAMKKT 241
C G T ++V++ + ++ Y++ +DV +I+ +K ER +N +K
Sbjct: 142 VAHCRDAGCKPITSEDVQKALENLREAQNYRYTTDDVTKILAQKRERLGGVRHNLLFEKE 201
Query: 242 QLMKERDMAQSKGDDEEASILQRKIDDLE-ERANELDKARTSTISSISYINNRNRRKNVE 300
Q+ A+++ D +A L+ ++++++ E L++ ST +++ IN +N +N E
Sbjct: 202 QIRTAIAHAEAEDDFAKAEELRGRLEEIDREVKARLEQRSGSTQDALANINRKNEIQNSE 261
Query: 301 EAEK 304
+ K
Sbjct: 262 KLSK 265
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 336 TKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIG-NNTGIPLYRVSE 385
TK E+ I + R ++E + P F V+GC R+GIG N G +YR+ E
Sbjct: 32 TKAEIESITIRRHQLESWISEPFFESAVVGCLTRVGIGLNKHGENVYRLVE 82
>gi|356548759|ref|XP_003542767.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Glycine
max]
Length = 656
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 91/187 (48%), Gaps = 6/187 (3%)
Query: 135 VCETGKIYSLGKTRTNKGLKLRHGNSERVFR--LEFISNQEFTESEFIRWKDQCMTEGVA 192
E + Y L T K L + GN R + +S+ E EF +W + G
Sbjct: 325 ASEPDRQYKLENKTTYKYLNVVWGNESSAARWQMAMVSDSAPMEEEFKQWVKEVDCSGGR 384
Query: 193 LPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERDMAQS 252
+P+K +V K + IQ + + + V+Q+++EK+ P N A +K +L +E ++AQS
Sbjct: 385 MPSKQDVLEKKQAIQKAITFVYSAATVKQMLQEKKSASTRPLNVAAEKDRLRRELEIAQS 444
Query: 253 KGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAE--KAIMVSC 310
K D+ E ++ ++ +LE A+ K + + ++ +N +NR +N + A K + +
Sbjct: 445 KHDEAEVERIKTRLQELE--ASRQAKQKDAKALKLAEMNRKNRFENFKNASELKPVNIGL 502
Query: 311 CCCCSGF 317
+G+
Sbjct: 503 KAGEAGY 509
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 338 EELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRV 383
+++ I + R K+ K P F ++++GCFVR+GIG + P+YR+
Sbjct: 272 QDIKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKTGPIYRL 317
>gi|224078932|ref|XP_002305685.1| PAF1 complex component [Populus trichocarpa]
gi|222848649|gb|EEE86196.1| PAF1 complex component [Populus trichocarpa]
Length = 662
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 107/241 (44%), Gaps = 5/241 (2%)
Query: 135 VCETGKIYSLGKTRTNKGLKLRHG--NSERVFRLEFISNQEFTESEFIRWKDQCMTEGVA 192
E K Y L T K L + G S +++ +S+ TE E+ +W + G
Sbjct: 328 AAEPDKPYKLENKSTYKYLNVTWGADTSAARWQMAMVSDSGPTEEEYKQWVREVECGGGR 387
Query: 193 LPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERDMAQS 252
LP+K ++ K + I+ + + V+Q+++EK+ P N A +K +L +E ++AQS
Sbjct: 388 LPSKQDILEKKEAIRKSNTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEIAQS 447
Query: 253 KGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIMVSCCC 312
K D+ E + +I++LE A+ K + + ++ +N +NR +N A + V+
Sbjct: 448 KHDEAEVERINARIEELE--ASRHAKVKDAKAIRLAEMNRKNRVENFRNASEMKPVNTGL 505
Query: 313 CCSGFSYRSVKSSASRKVIEYIETKEELNRIRLSRF-KMEKLVHLPIFGQIVIGCFVRIG 371
Y +R Y+ E + ++ + + V + Q+V G G
Sbjct: 506 KAGEAGYDPFSRRWTRSRNYYVSKPAEADDPVATKISEANETVAVAASNQVVAGVMSEAG 565
Query: 372 I 372
+
Sbjct: 566 V 566
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 336 TKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRV 383
T E++ I + R K+ K P F +++IGCFVR+GIG + P+YR+
Sbjct: 273 TYEDIKEITIRRTKLAKWFMEPWFEELIIGCFVRVGIGRSKSGPVYRL 320
>gi|336372852|gb|EGO01191.1| hypothetical protein SERLA73DRAFT_167323 [Serpula lacrymans var.
lacrymans S7.3]
Length = 555
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 96/200 (48%), Gaps = 10/200 (5%)
Query: 113 VCDLTS-W--HIFSSHPQEI-GEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEF 168
+C++ S W H+++ H I ++S K Y + N+ L+HG S + F +E
Sbjct: 259 LCEIQSTWYGHMYTVHVISIVKDLS--ANLVKPYKINDKTVNQSFDLKHGKSVKSFTMEK 316
Query: 169 ISNQEFTESEFIRWKDQCMTEGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKER 228
+SN F EF R C E LP++ +E+KS ++ + E D+ ++ K +
Sbjct: 317 VSNAPFDMKEFERLTKTCAAEETKLPSRRHLEKKSAQLARLITQPVTESDINAMLARKSQ 376
Query: 229 FKPTPYNYA---MKKTQLMKERDMAQSKGDDEEASILQRKIDDLEERANELDKARTSTIS 285
+ ++ M++++L + R +A + D E + + K+ +L N ++ T
Sbjct: 377 LQANKHSAGWITMERSRLTQARTLALRRQDYSEVADIDAKLAELPLPVNVREEEGTLN-D 435
Query: 286 SISYINNRNRRKNVEEAEKA 305
++ +N RNR+ N+E KA
Sbjct: 436 RLAKVNERNRKANLEAIRKA 455
>gi|356572305|ref|XP_003554309.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Glycine
max]
Length = 646
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 89/185 (48%), Gaps = 16/185 (8%)
Query: 130 GEISGVCETGKI--------YSLGKTRTNKGLKLRHGNSERVFR--LEFISNQEFTESEF 179
G I G+C + Y L T+K L + GN R + +S+ E EF
Sbjct: 302 GPIYGLCMVKNVDATDCDQQYKLEDKTTHKYLNVVWGNETSATRWQMAMVSDSPPEEEEF 361
Query: 180 IRWKDQCMTEGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMK 239
I+W G +PTK EV K + IQ ++ + V+Q+++EK+ K P N A +
Sbjct: 362 IQWVKDVERRGGRMPTKQEVAEKKEAIQKTNLFVYSAATVKQMLQEKKSAKTRPLNIAAE 421
Query: 240 KTQLMKERDMAQSKGDDEEASILQRKIDDLEE--RANELDKARTSTISSISYINNRNRRK 297
K +L E ++A SK + E + ++ +LEE +A +D AR ++ +N +NR +
Sbjct: 422 KDRLRTELEIAHSKNNKAEVKRIMTRLLELEESRQAKTMD-ARALKLAE---MNRKNRFE 477
Query: 298 NVEEA 302
N + A
Sbjct: 478 NFKNA 482
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 338 EELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLY 381
E + I + R K+ K P F +++ GCFVR+GIG + P+Y
Sbjct: 262 EHIKEITIRRSKLAKWFMEPFFEELIAGCFVRVGIGRSMSGPIY 305
>gi|297840459|ref|XP_002888111.1| At1g61040/T7P1_17 [Arabidopsis lyrata subsp. lyrata]
gi|297333952|gb|EFH64370.1| At1g61040/T7P1_17 [Arabidopsis lyrata subsp. lyrata]
Length = 643
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 93/198 (46%), Gaps = 9/198 (4%)
Query: 135 VCETGKIYSLGKTRTNKGLKLRHGNSERVFR--LEFISNQEFTESEFIRWKDQCMTEGVA 192
+ K Y L T+K L + GN R + IS+ E E+ +W +
Sbjct: 318 ATDPDKTYKLENKTTHKYLNVVWGNETSAARWQMAMISDGHPLEEEYRQWIREVERTNGR 377
Query: 193 LPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERDMAQS 252
+PTK ++ K + IQ + + E V+Q+++EK+ P N A +K +L KE ++AQS
Sbjct: 378 MPTKQDISEKKEAIQRINSFVYSAETVKQMLQEKKSASVRPMNVAAEKDRLRKELEIAQS 437
Query: 253 KGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAE--KAIMVSC 310
K D+ ++ KI L+ N+ K ++ +N +NR +N + A K+I S
Sbjct: 438 KNDEAGVERIKTKIKQLDASRNK--KGVDKKALKLAEMNKKNRAENFKNASEVKSISASL 495
Query: 311 CCCCSG---FSYRSVKSS 325
+G FS R +SS
Sbjct: 496 KAGEAGYDPFSRRWTRSS 513
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 33/50 (66%)
Query: 334 IETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRV 383
+ T E++ I + R K+ K + P F ++++GCFVR+GIG + P+YR+
Sbjct: 261 VPTFEDVKEITIRRSKLAKWLMEPFFEELIVGCFVRVGIGRSKSGPIYRL 310
>gi|67536800|ref|XP_662174.1| hypothetical protein AN4570.2 [Aspergillus nidulans FGSC A4]
gi|40741723|gb|EAA60913.1| hypothetical protein AN4570.2 [Aspergillus nidulans FGSC A4]
gi|259482599|tpe|CBF77234.1| TPA: RNA polymerase II transcription elongation factor Rtf1p,
putative (AFU_orthologue; AFUA_2G01900) [Aspergillus
nidulans FGSC A4]
Length = 600
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 88/172 (51%), Gaps = 7/172 (4%)
Query: 139 GKIYSL----GKT-RTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVAL 193
GK Y+L G+T T++ L HG + R F S+ FTE+EF RW+ E +
Sbjct: 325 GKKYALEGANGRTFTTDQYAVLAHGKTTRAFPFVACSDSPFTEAEFNRWRQVMAVEDCKM 384
Query: 194 PTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERDMAQSK 253
PTK ++ +K +I + +Q+ E++ + +R K+ T + K+ + K+ +AQ
Sbjct: 385 PTKSQLAKKVMDINRLINHQFTPEELNEKLR-KQGLLDTKTTF-FKRVDIEKKLKIAQEL 442
Query: 254 GDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKA 305
GDD+E LQ ++ +L A + + + ++ +N RN++ N E +A
Sbjct: 443 GDDDEVGRLQVELANLGSSAKPRTEKKLTEHERLAQLNLRNQKLNYENVRRA 494
>gi|301102985|ref|XP_002900579.1| RNA polymerase-associated protein RTF1 [Phytophthora infestans
T30-4]
gi|262101842|gb|EEY59894.1| RNA polymerase-associated protein RTF1 [Phytophthora infestans
T30-4]
Length = 760
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 87/172 (50%), Gaps = 1/172 (0%)
Query: 131 EISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEG 190
E+ VC+ + Y+ T+ G+ G S+R ++L +S E EF+ W+ E
Sbjct: 396 EVVNVCKMARSYTFCGETTHTGIICAFGKSKREWKLNGVSGHSLREREFLLWRAVMNKER 455
Query: 191 VALPTKDEVERK-SKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERDM 249
+ PT EV+R SK+ + + + + +V+ +VR K+ + + +++ +L ++
Sbjct: 456 LHFPTHGEVKRLFSKKERMVTQHNYTDAEVDDMVRRKQAVGLSTVSLGVQRVRLERDLRA 515
Query: 250 AQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEE 301
AQ + E+A +L+ ++ L + E K + + I+ IN RNR N+++
Sbjct: 516 AQDMKNFEKAVVLEERLQKLLAKNEERKKHNSDDVLRINEINRRNREANIQQ 567
>gi|401882542|gb|EJT46796.1| rtf1 protein [Trichosporon asahii var. asahii CBS 2479]
gi|406700769|gb|EKD03933.1| rtf1 protein [Trichosporon asahii var. asahii CBS 8904]
Length = 484
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 90/185 (48%), Gaps = 8/185 (4%)
Query: 129 IGEISGVCETGKIYSLGKTRTN-KGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCM 187
I + SG I GK T+ + L +G +R++R+ +SN EF ESEF R+ C
Sbjct: 241 ITDSSGSHGRYSIEYKGKQVTDTRALLCSYGKVQRLYRIADVSNSEFDESEFSRFMLTCQ 300
Query: 188 TEGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPY--NYAMKKTQLMK 245
+GV P + E++ K +I+ E+++ + ++ +++ KPT + ++ T LM+
Sbjct: 301 GDGVLPPRRSELKHKHDQIRKLRDRPMTEDEINRQIQARQQHKPTAHRTKIVLEVTSLMR 360
Query: 246 ERDMAQSKGDDEEASILQRKIDDLEERANELDKARTSTISS-----ISYINNRNRRKNVE 300
+++A + D E +L ++I DL N + + I IN NRRK E
Sbjct: 361 SKELALRRNDFEALELLTQQIRDLGADPNTGELEEGGEELNEADLRIQRINENNRRKTKE 420
Query: 301 EAEKA 305
+A
Sbjct: 421 SMARA 425
>gi|195348050|ref|XP_002040564.1| GM19250 [Drosophila sechellia]
gi|194121992|gb|EDW44035.1| GM19250 [Drosophila sechellia]
Length = 261
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
I E+ G+CE Y + + TN L+LR+ + E + +SN FT+ EF W+D C+
Sbjct: 100 IAEVLGICELDFGYKVEQIPTNVALRLRYEDLEMQHEINDVSNLAFTQEEFELWRDNCVN 159
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWK 215
+ ++ PT + RK E+ N + + K
Sbjct: 160 QAISPPTTHTLTRKKVELYNALQLEAK 186
Score = 45.1 bits (105), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 33/52 (63%)
Query: 334 IETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
+ ++++L +RLSR ++ L+ P F Q V GCFVR+ + +P +R++E
Sbjct: 51 VTSRDQLELLRLSRHRIGMLLVRPAFEQAVTGCFVRVNVSGQGELPDHRIAE 102
>gi|20128961|ref|NP_570030.1| CG12498 [Drosophila melanogaster]
gi|6940336|emb|CAB72279.1| EG:BACR43E12.1 [Drosophila melanogaster]
gi|7290368|gb|AAF45827.1| CG12498 [Drosophila melanogaster]
gi|158853969|gb|ABW82132.1| IP21171p [Drosophila melanogaster]
Length = 261
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 47/87 (54%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
I E+ G+CE Y + + TN L+LR+ + E + +SN FT+ EF W+D C+
Sbjct: 100 IAEVLGICELDFGYKVEQIPTNVALRLRYDDLEMQHEINDVSNLNFTQEEFELWRDNCVN 159
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWK 215
+ ++ PT + RK E+ N + + K
Sbjct: 160 QAISPPTTHILTRKKVELYNALQLEAK 186
Score = 44.7 bits (104), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 33/52 (63%)
Query: 334 IETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
+ ++++L +RLSR ++ L+ P F Q V GCFVR+ + +P +R++E
Sbjct: 51 VTSRDQLELLRLSRHRIGLLLVRPAFEQAVTGCFVRVNVSGQGELPDHRIAE 102
>gi|303288674|ref|XP_003063625.1| PAF1 complex protein Rtf1 [Micromonas pusilla CCMP1545]
gi|226454693|gb|EEH51998.1| PAF1 complex protein Rtf1 [Micromonas pusilla CCMP1545]
Length = 636
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 94/188 (50%), Gaps = 10/188 (5%)
Query: 148 RTNKGLKLRHGNS--ERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEVERKSKE 205
+T K L LR+G++ +R F ++ +SN E T E+++W + G +P +V +
Sbjct: 307 KTGKWLILRYGDASTDRAFSIDKVSNAEVTAGEYVKWCKKMEESGRRMPQLRDVAAAEEN 366
Query: 206 IQNGMMYQWKEEDVEQIVREKE--RFKPTPYNYAMKKTQLMKERDMAQSKGDDEEASILQ 263
I+ Y++ EDV++++++K R P N AM+K + + A+++GDDE L
Sbjct: 367 IKFASSYRYTSEDVQKMIQKKREGRDGLAP-NLAMEKETIRRLIARAKAEGDDEAVETLT 425
Query: 264 RKID-DLEERANELDK-ARTSTISSISYINNRNRRKNVEEAEKAIMVSCCCCCSGFSYRS 321
+++ +E +LDK R +T+++ IN RN + N + SG +S
Sbjct: 426 ARLEVVMETLTKQLDKGGRQATMAN---INKRNNQLNDANLSRIASEQIARAASGAPDKS 482
Query: 322 VKSSASRK 329
SR+
Sbjct: 483 ADDPFSRR 490
>gi|356521329|ref|XP_003529309.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Glycine
max]
Length = 656
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 89/187 (47%), Gaps = 4/187 (2%)
Query: 135 VCETGKIYSLGKTRTNKGLKLRHGNSERVFR--LEFISNQEFTESEFIRWKDQCMTEGVA 192
E + Y L T K L + GN R + +S+ E EF +W + G
Sbjct: 325 ASEPDRQYKLENKTTYKYLNVVWGNESSAARWQMAMVSDSAPLEEEFKQWVKEVDRSGGR 384
Query: 193 LPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERDMAQS 252
+P+K +V K + IQ + + + V+Q+++EK+ P N A +K +L +E ++AQS
Sbjct: 385 MPSKQDVLEKKQAIQKAITFVYSAATVKQMLQEKKSASTRPLNVAAEKDRLRRELEIAQS 444
Query: 253 KGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIMVSCCC 312
K D+ E ++ ++ +LE A+ K + + ++ +N +NR +N + A + V+
Sbjct: 445 KYDEAEVERIKTRLLELE--ASRQAKQKDAKALKLAEMNRKNRFENFKNASEMKPVNTGL 502
Query: 313 CCSGFSY 319
Y
Sbjct: 503 KAGEAGY 509
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 338 EELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRV 383
+++ I + R K+ K P F ++++GCFVR+GIG + P+YR+
Sbjct: 272 QDVKEITIRRSKLAKWFMEPFFEELIVGCFVRVGIGRSKTGPIYRL 317
>gi|402085773|gb|EJT80671.1| hypothetical protein GGTG_00665 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 596
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 78/145 (53%), Gaps = 11/145 (7%)
Query: 132 ISGVCETGKIYSL----GKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCM 187
I G+ + GK Y+ G T++ + HG + R + SN FT+SE+ R+K C
Sbjct: 317 IKGIAK-GKEYATDGAHGTIITDQYVTAAHGKAVRDWPFIACSNSPFTDSEWRRYKSTCA 375
Query: 188 TEGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKER 247
+EG LPT+ +++ K K+I + + W E+V Q + + K Y ++ E+
Sbjct: 376 SEGEPLPTESKIDAKVKDINGLLAHAWTNEEVSQKIERIRKLKARFQGY----DRMELEQ 431
Query: 248 DMAQSK--GDDEEASILQRKIDDLE 270
++A+S+ G+++ A LQ ++D+LE
Sbjct: 432 EIAESRAVGNEDRAKELQEQLDNLE 456
Score = 41.6 bits (96), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Query: 338 EELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNN--TGIPLYRVS 384
+ + R+RLSR + ++ P F + ++GCFVRI IG + TG +YR++
Sbjct: 267 DHIQRVRLSRNRFGQVCFHPGFEKAMVGCFVRISIGPDRETGENVYRMA 315
>gi|293332492|ref|NP_001168711.1| uncharacterized protein LOC100382503 [Zea mays]
gi|223950353|gb|ACN29260.1| unknown [Zea mays]
gi|413916604|gb|AFW56536.1| plus-3 domain-containing protein [Zea mays]
Length = 650
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 83/167 (49%), Gaps = 5/167 (2%)
Query: 164 FRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIV 223
+++ +S+ E EF W G +PT+ EV K + IQN + + V+Q++
Sbjct: 353 WQMTQVSDSPPNEEEFKDWLQAAEKNGARIPTRQEVLDKKEAIQNAYNFVYSAATVQQML 412
Query: 224 REKERFKPTPYNYAMKKTQLMKERDMAQSKGDDEEASILQRKIDDLEERANELDKARTST 283
+EK + P N A +K +L E +MA S+ ++ EA ++ K+ +L+ RA + K +
Sbjct: 413 QEKSAVR-RPINIAAEKDRLRSELEMALSRRNEHEAERIRTKLKNLQNRAQPVSK--DNK 469
Query: 284 ISSISYINNRNRRKNVEEAE--KAIMVSCCCCCSGFSYRSVKSSASR 328
+ + +N +NR N + A K + S +G+ S + + SR
Sbjct: 470 AAKLEAMNRKNRADNFKNASELKPVNTSLKAGEAGYDPFSRRWTRSR 516
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 338 EELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIG-NNTGIPLYRV 383
+++ I L R K+ K P F ++ GCFVR+GIG G P YR+
Sbjct: 268 DDVKSITLRRSKLVKWFMEPFFDDLISGCFVRLGIGKTKNGTPSYRL 314
>gi|195564835|ref|XP_002106017.1| GD16620 [Drosophila simulans]
gi|194203384|gb|EDX16960.1| GD16620 [Drosophila simulans]
Length = 241
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 46/85 (54%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
I E+ G+CE Y + + TN L+LR+ + E + +SN FT+ EF W+D C+
Sbjct: 100 IAEVLGICELDFGYKVEQIPTNVALRLRYEDLEMQHEINDVSNLAFTQEEFELWRDNCVN 159
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQ 213
+ ++ PT + RK E+ N + +
Sbjct: 160 QAISPPTTHTLTRKKVELYNALQLE 184
Score = 44.3 bits (103), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 33/52 (63%)
Query: 334 IETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
+ ++++L +RLSR ++ L+ P F Q V GCFVR+ + +P +R++E
Sbjct: 51 VTSRDQLELLRLSRHRIGMLLVRPAFEQAVTGCFVRVNVSGQGELPDHRIAE 102
>gi|46136807|ref|XP_390095.1| hypothetical protein FG09919.1 [Gibberella zeae PH-1]
Length = 596
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 85/174 (48%), Gaps = 22/174 (12%)
Query: 149 TNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEVERKSKEIQN 208
T++ +K HG + + F S+ +FT+SE R+K C EGV LPTK + K +I
Sbjct: 321 TDQYVKAAHGKAIKEFPFIAASSGKFTDSELNRYKVTCHNEGVTLPTKAYLTDKVDDINR 380
Query: 209 GMMYQWKEEDVE----QIVREKERFKPTPYNYAMKKTQLMKERDMAQSKGDDEEASILQR 264
+ + W E+++ +I K RF P ++ ++ K D A+ +GDD+ A LQ
Sbjct: 381 LINHSWTSEEIKTRLARISDLKRRFDPA------ERERIAKLLDEARQRGDDDRAEELQE 434
Query: 265 KIDD-----------LEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIM 307
++D+ L + +E KA+ S ++ N NRR N E KA +
Sbjct: 435 ELDNLGSQRLAFRTSLGSKHSEEPKAQ-SEQDRLAERNRENRRLNAEAVRKAQL 487
>gi|331216958|ref|XP_003321158.1| hypothetical protein PGTG_02200 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309300148|gb|EFP76739.1| hypothetical protein PGTG_02200 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 548
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 87/182 (47%), Gaps = 13/182 (7%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+GEI+ + + K Y + T L + E+ L+ +SN E+E++ +C
Sbjct: 279 VGEITNIVQHRKYYEVEGQATKVALVVVLAKDEKTVLLDVVSNSSIQENEWLFVVGECQK 338
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFK-----PTPYNYAMKKTQL 243
V LP+K E+ RK K I+ + E D+ V+ K+ + PT + ++ +L
Sbjct: 339 HAVRLPSKKEISRKIKMIEKYQDWVKDESDITAQVKAKKEMRAQGLGPTTLTIS-ERLRL 397
Query: 244 MKERDMAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAE 303
ERD A + G+ E A+ L R+++ + A T S +S +N RNR+ N EE
Sbjct: 398 ESERDQAAALGNLELAAQLTRQLE-------QASGAVFKTDSLMSELNERNRKANREEIR 450
Query: 304 KA 305
+A
Sbjct: 451 RA 452
>gi|195134482|ref|XP_002011666.1| GI11152 [Drosophila mojavensis]
gi|193906789|gb|EDW05656.1| GI11152 [Drosophila mojavensis]
Length = 360
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 42/82 (51%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
I EI G E + Y +GKT TN L LR+ + L ISN FT EF W D C+
Sbjct: 141 IAEIMGTSELAEGYYVGKTPTNIVLHLRYEDLVEKHELNDISNMAFTTEEFDFWHDNCIC 200
Query: 189 EGVALPTKDEVERKSKEIQNGM 210
+G PT + + RK EI N +
Sbjct: 201 QGYEWPTVELISRKKIEIYNAL 222
>gi|299116457|emb|CBN76175.1| conserved unknown protein (Partial) [Ectocarpus siliculosus]
Length = 517
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 89/175 (50%), Gaps = 6/175 (3%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSE-RVFRLEFISNQEFTESEFIRWKDQCM 187
+ EI GV + Y +G + T K LK+ +S+ R ++ +SN +E E+ RWKD
Sbjct: 287 MAEIVGVGPYKRKYKIGNSYTQKCLKISASSSQVRDQCMDIVSNSRISEGEYTRWKD--G 344
Query: 188 TEGVALPTKDEVERKSKEIQNGMMYQ---WKEEDVEQIVREKERFKPTPYNYAMKKTQLM 244
+G +PT E ++ ++ + Q + E+V +V++++ N A+ + +L
Sbjct: 345 RKGAKVPTLTVSECNARRVRMNKIVQGHRYSAEEVSAMVKQRQSEGVAFTNVALSRMKLD 404
Query: 245 KERDMAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNV 299
+ A ++G ++EA + ++ L+ER + K+ S + + +N RN+ NV
Sbjct: 405 NSLEAAVAEGREDEADFCREQLAKLDEREAQKKKSLDSGAAGMRALNERNKTFNV 459
>gi|194887568|ref|XP_001976756.1| GG18631 [Drosophila erecta]
gi|190648405|gb|EDV45683.1| GG18631 [Drosophila erecta]
Length = 243
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
I E+ G CE Y + + TN L+LR+ + E + +SN FT+ EF W+D C+
Sbjct: 100 IAEVLGTCELDFGYKVEQIPTNVALRLRYEDLEVQHEINDVSNLAFTQEEFELWRDNCVN 159
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWK 215
+ ++ PT + RK E+ N + + K
Sbjct: 160 QAISPPTTHTMTRKKVELYNALQSEAK 186
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 34/52 (65%)
Query: 334 IETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
+ ++++L +++LSR ++ L+ P F Q V GCFVR+ I +P +R++E
Sbjct: 51 VTSRDQLEQLQLSRHRIGLLLVRPSFEQAVTGCFVRVNINGQEELPDHRIAE 102
>gi|408397545|gb|EKJ76686.1| hypothetical protein FPSE_03097 [Fusarium pseudograminearum CS3096]
Length = 597
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 85/174 (48%), Gaps = 22/174 (12%)
Query: 149 TNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEVERKSKEIQN 208
T++ +K HG + + F S+ +FT+SE R++ C EGV LPTK + K +I
Sbjct: 322 TDQYVKAAHGKAIKEFPFIAASSGKFTDSELNRYRVTCHNEGVTLPTKAYLTDKVDDINR 381
Query: 209 GMMYQWKEEDVE----QIVREKERFKPTPYNYAMKKTQLMKERDMAQSKGDDEEASILQR 264
+ + W E+++ +I K RF P ++ ++ K D A+ +GDD+ A LQ
Sbjct: 382 LINHSWTSEEIKTRLARISDLKRRFDPA------ERERIAKLLDEARQRGDDDRAEELQE 435
Query: 265 KIDD-----------LEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIM 307
++D+ L + +E KA+ S ++ N NRR N E KA +
Sbjct: 436 ELDNLGSQRLAFRTSLGSKHSEEPKAQ-SEQDRLAERNRENRRLNAEAVRKAQL 488
>gi|66807937|ref|XP_637691.1| hypothetical protein DDB_G0286523 [Dictyostelium discoideum AX4]
gi|60466123|gb|EAL64188.1| hypothetical protein DDB_G0286523 [Dictyostelium discoideum AX4]
Length = 627
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 82/171 (47%), Gaps = 3/171 (1%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
I EI + K Y + T+K L L + S + F +E +SN T +E +W +
Sbjct: 310 IAEIVEIRTGHKQYKVENKETDKLLVLSYAGSTKEFGIENVSNNAITPAEHEKWISDMVR 369
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
LPT +E++ K +I+ Y + ED+E+ ++ ++ TP N A++K + + R+
Sbjct: 370 AKQVLPTPEEIDMKIGDIKKAQDYTYTNEDIEKRASDRSKYLKTPVNIAIEKAKSIALRE 429
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISS-ISYINNRNRRKN 298
+ +E + KI++L + A + + S + I IN +N+ N
Sbjct: 430 TLDPQS--QEYRTICEKIEELTKLAISIKEENVSKVDQLIQTINKKNKSLN 478
>gi|357151448|ref|XP_003575794.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog
[Brachypodium distachyon]
Length = 658
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 84/167 (50%), Gaps = 4/167 (2%)
Query: 164 FRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIV 223
+++ +S+ E EF W + GV +PT+ EV K + IQ + + V+Q++
Sbjct: 357 WQMTQVSDSPVLEEEFKEWLQEAEKNGVRIPTRQEVLEKKEAIQKAYTFVYSAATVKQML 416
Query: 224 REKERFKPTPYNYAMKKTQLMKERDMAQSKGDDEEASILQRKIDDLEERANELDKARTST 283
REK+ P N A +K +L + +MA + D+ EA ++ +++ L++ A + +
Sbjct: 417 REKKSAVRRPMNVAAEKDRLRDQLEMALVRRDEVEAERIRARLNQLQKIAQPM--SNNEK 474
Query: 284 ISSISYINNRNRRKNVEEAE--KAIMVSCCCCCSGFSYRSVKSSASR 328
+ + +N +NR +N + A KA+ S +G+ S + + SR
Sbjct: 475 AAKLEEMNRKNRAENFKTASEMKAVNTSLKAGEAGYDPFSRRWTRSR 521
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 26/46 (56%)
Query: 338 EELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRV 383
+++ I L R K+ K P F +V GCFVRIGIG P YR+
Sbjct: 273 DDVKSITLRRTKLVKWFMEPFFEDLVSGCFVRIGIGKTKSGPKYRL 318
>gi|218187002|gb|EEC69429.1| hypothetical protein OsI_38596 [Oryza sativa Indica Group]
Length = 780
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 82/162 (50%), Gaps = 4/162 (2%)
Query: 169 ISNQEFTESEFIRWKDQCMTEGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKER 228
+S+ +E EF +W GV +PT+ EV K + IQ + + V+++++EK+
Sbjct: 488 VSDSFPSEEEFKKWLQVAEKNGVRVPTRQEVLEKKEAIQQAYNFVYSARTVQKMLKEKKS 547
Query: 229 FKPTPYNYAMKKTQLMKERDMAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSIS 288
P N A +K +L E DMA ++ D+ EA ++ K++ L++ + + + + +
Sbjct: 548 AIRRPINVAAEKDRLRNELDMAIARRDEAEAERIRSKLNQLQKMSKPI--SNNEKAAKLE 605
Query: 289 YINNRNRRKNVEEAE--KAIMVSCCCCCSGFSYRSVKSSASR 328
+N +NR +N + A K + S +G+ S + + SR
Sbjct: 606 AMNKKNRAENFKNASEMKPVNTSLKVGEAGYDPFSRRWTRSR 647
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 338 EELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIG-NNTGIPLYRV 383
+++ I L R K+ K P F +V GCFVR+GIG + +G P YR+
Sbjct: 398 DDVKSITLRRSKLVKWFMEPFFEDLVSGCFVRLGIGKSKSGTPDYRL 444
>gi|224113965|ref|XP_002316628.1| PAF1 complex component [Populus trichocarpa]
gi|222859693|gb|EEE97240.1| PAF1 complex component [Populus trichocarpa]
Length = 664
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 88/187 (47%), Gaps = 6/187 (3%)
Query: 135 VCETGKIYSLGKTRTNKGLKLRHGNSERVFR--LEFISNQEFTESEFIRWKDQCMTEGVA 192
E K Y L T K L + G R + +S+ TE E+ +W + G
Sbjct: 330 AAEPDKPYKLENKSTYKYLNVTWGADSSAARWQMAMVSDSAPTEEEYKQWVREAERGGGR 389
Query: 193 LPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERDMAQS 252
LP+K ++ K + I+ + + V+Q+++EK+ P N A +K +L +E ++AQS
Sbjct: 390 LPSKQDILEKKEAIRKSNTFVYSAATVKQMLQEKKSASSRPLNVAAEKDRLRRELEIAQS 449
Query: 253 KGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAE--KAIMVSC 310
+ D+ E ++ +I +LE A+ K + + ++ +N +NR +N A K I
Sbjct: 450 RHDEAEVERIEARILELE--ASRQAKVKDAKALRLAEMNRKNRVENFRNASELKPINTGL 507
Query: 311 CCCCSGF 317
+G+
Sbjct: 508 KAGEAGY 514
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 336 TKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRV 383
T E++ I + R K+ K P F +++IGCFVR+GIG + P+YR+
Sbjct: 275 TYEDIKEITIRRTKLAKWFMEPWFEELIIGCFVRVGIGRSKTGPVYRL 322
>gi|226509662|ref|NP_001145747.1| uncharacterized protein LOC100279254 [Zea mays]
gi|219884293|gb|ACL52521.1| unknown [Zea mays]
gi|414878213|tpg|DAA55344.1| TPA: hypothetical protein ZEAMMB73_654453 [Zea mays]
Length = 647
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 77/156 (49%), Gaps = 5/156 (3%)
Query: 164 FRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIV 223
+++ +S+ E EF W + G +PT+ EV K + IQ + + V+Q++
Sbjct: 350 WQMTQVSDSPPNEEEFKEWLQEAEKHGARIPTRQEVLDKKEAIQEAYNFVYSAATVQQML 409
Query: 224 REKERFKPTPYNYAMKKTQLMKERDMAQSKGDDEEASILQRKIDDLEERANELDKARTST 283
REK + P N A +K +L E +MA S+ ++ EA ++ K+ +L+ R + K +
Sbjct: 410 REKSAVR-RPINIAAEKDRLRSELEMALSRRNEAEAERIRVKLKNLQSRPQPVSK--DNK 466
Query: 284 ISSISYINNRNRRKNVEEAE--KAIMVSCCCCCSGF 317
+ + +N +NR N + A K + S +G+
Sbjct: 467 AAKLEAMNRKNRADNFKNASELKPVNTSLKAGEAGY 502
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 338 EELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNN-TGIPLYRV 383
+++ I L R K+ K P F ++ GCFVR+GIG G P YR+
Sbjct: 265 DDVKSITLRRSKLVKWFMEPFFDDLISGCFVRLGIGQTKNGTPRYRL 311
>gi|190344599|gb|EDK36304.2| hypothetical protein PGUG_00402 [Meyerozyma guilliermondii ATCC
6260]
Length = 539
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 99/198 (50%), Gaps = 20/198 (10%)
Query: 140 KIYSLGKTRTNKGLKL-RHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDE 198
K YS+ ++ + L + ++ N + F L S+ + E R+K + G LP D+
Sbjct: 276 KPYSVAGSKIDLYLTVTQNKNQTKEFPLTVFSDSPISTQELDRYKIELEKTGEELPYVDD 335
Query: 199 VERKSKEIQNGMMYQWKEEDVEQIVREKERFKPT--PYNYAMKKTQLMKERDMAQSKGDD 256
V K + +Q+ ++DV +++ K++ + YN +K++L+ +A+ +G+
Sbjct: 336 VNEKHESLQHLTTRGLSDKDVNEMIERKQKLQANVGGYNAVFEKSKLLDLLKIAKQEGNT 395
Query: 257 EEASILQRKIDDLEER-ANELDKARTS-TISSISYINNRNRRKNVEEAEKAIMVSCCCCC 314
+A LQ K+ LE A++ + + TS +++++S +N RNRR N + KA
Sbjct: 396 SKAESLQAKLTALENTLASQTNTSNTSESLNTMSKVNERNRRLNQKNIRKA--------- 446
Query: 315 SGFSYRSVKSSASRKVIE 332
+KSS RKV+E
Sbjct: 447 ------EIKSSQLRKVVE 458
>gi|195477473|ref|XP_002100213.1| GE16284 [Drosophila yakuba]
gi|194187737|gb|EDX01321.1| GE16284 [Drosophila yakuba]
Length = 269
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%)
Query: 127 QEIGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQC 186
I E+ G+CE Y + + TN L+LR+ + + +SN FT+ EF W+D C
Sbjct: 98 HRIAEVLGICELDFGYKVEQIPTNVALRLRYEDLVMQHEINDVSNLAFTQDEFELWRDNC 157
Query: 187 MTEGVALPTKDEVERKSKEIQNGMMYQWK 215
+ + ++ PT V RK E+ N + + K
Sbjct: 158 VNQALSPPTTHMVTRKKVELYNALQSEAK 186
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 34/52 (65%)
Query: 334 IETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
+ ++++L ++RLSR ++ L+ P F Q V GCFVR+ + +P +R++E
Sbjct: 51 VTSRDQLEQLRLSRHRIGLLLIRPAFEQAVTGCFVRVNVNGQEELPDHRIAE 102
>gi|428181055|gb|EKX49920.1| hypothetical protein GUITHDRAFT_161975 [Guillardia theta CCMP2712]
Length = 684
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 90/195 (46%), Gaps = 29/195 (14%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLR------HGNSERVFRLEFISNQEFTESEFIRW 182
+G+I G+ E K Y ++T + + L+ H ++ F++ +SN+ F SE +W
Sbjct: 336 LGQIIGLKEVDKKYEGVCSKTKRKIPLQKVLCVTHAGQQKKFQMTLVSNKPFLNSEVDKW 395
Query: 183 KDQCMTEGVALPTKDEVERKSKEIQNGMMYQWKEE------DVEQIVREKERFKPTPYNY 236
E LPT DE++ E++ + +WKEE VEQI++EK + T N
Sbjct: 396 CKDVSIEREKLPTDDELD----ELKAKLEKRWKEEFRYDQGVVEQILQEKRKKGSTSGNV 451
Query: 237 AMKKTQLMKERDMA------QSKGDDEEASILQRKIDDLEERANELDK-------ARTST 283
A+ K L E + A + D + ++ +DL E+ NEL++ +
Sbjct: 452 ALNKLCLHDEMEEAWEDYKQLTDADPDSKDKAYQRWEDLREKVNELERKEKEQQESAQQG 511
Query: 284 ISSISYINNRNRRKN 298
S++ IN RN N
Sbjct: 512 YKSVNKINQRNHLAN 526
>gi|242083648|ref|XP_002442249.1| hypothetical protein SORBIDRAFT_08g017010 [Sorghum bicolor]
gi|241942942|gb|EES16087.1| hypothetical protein SORBIDRAFT_08g017010 [Sorghum bicolor]
Length = 656
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 77/156 (49%), Gaps = 5/156 (3%)
Query: 164 FRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIV 223
+++ +S+ E EF W + G +PT+ EV K + IQ + + V+Q++
Sbjct: 359 WQMTQVSDSPPNEEEFKEWLQEAEKNGARIPTRQEVLEKKESIQKAYNFVYSAVTVQQML 418
Query: 224 REKERFKPTPYNYAMKKTQLMKERDMAQSKGDDEEASILQRKIDDLEERANELDKARTST 283
+EK + P N A +K +L E +MA S+ ++ EA ++ K+ +L+ R ++ K
Sbjct: 419 KEKSAVR-RPINVAAEKDRLRSELEMALSRRNEAEAERIRAKLKNLQNRPQQVSK--DDK 475
Query: 284 ISSISYINNRNRRKNVEEAE--KAIMVSCCCCCSGF 317
+ + +N +NR N + A K + S +G+
Sbjct: 476 AAKLEAMNRKNRADNFKNASEMKPVNTSLKAGEAGY 511
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 338 EELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIG-NNTGIPLYRV 383
+++ I L R K+ K P F ++ GCFVR+GIG +G P YR+
Sbjct: 274 DDVKSITLRRSKLVKWFMEPFFDDLISGCFVRLGIGKTKSGNPRYRL 320
>gi|406860668|gb|EKD13725.1| RNA polymerase 2 transcription elongation factor [Marssonina
brunnea f. sp. 'multigermtubi' MB_m1]
Length = 612
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 94/183 (51%), Gaps = 27/183 (14%)
Query: 139 GKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDE 198
GK++ +T + ++ HG +ER + S+Q FTE+E+ R+K C+ EGV LPTK +
Sbjct: 333 GKLF-----KTTQYVRAAHGKAERNWPFISCSDQPFTEAEWNRYKQTCLVEGVPLPTKPK 387
Query: 199 VERKSKEIQNGMMYQWKEEDVEQIVREK----ERFKPTPYNYAMKKTQLMKERDMAQSKG 254
+ +K ++I + W E ++++ + + ++F P N + L+KE A++ G
Sbjct: 388 LIQKVQDINALIHRSWTEAELQEKLTKSGALIQKFLPIERN---RLNGLIKE---AKANG 441
Query: 255 DDEEASILQRKIDDLEE---------RANELDKARTSTISS---ISYINNRNRRKNVEEA 302
+D + Q+++D LE R + + +S ++ +N +NR KN EE
Sbjct: 442 NDAKVEQYQQELDALEVPKLAYGTSLRPSPKKSSVAPGMSQQDRLALLNRQNRAKNAEEV 501
Query: 303 EKA 305
+A
Sbjct: 502 RQA 504
>gi|77556034|gb|ABA98830.1| Plus-3 domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|77556035|gb|ABA98831.1| Plus-3 domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|215697432|dbj|BAG91426.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 522
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 82/162 (50%), Gaps = 4/162 (2%)
Query: 169 ISNQEFTESEFIRWKDQCMTEGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKER 228
+S+ +E EF +W GV +PT+ +V K + IQ + + V+++++EK+
Sbjct: 230 VSDSFPSEEEFKKWLQVAEKNGVRVPTRQDVLEKKEAIQQAYNFVYSAHTVQKMLKEKKS 289
Query: 229 FKPTPYNYAMKKTQLMKERDMAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSIS 288
P N A +K +L E DMA ++ D+ EA ++ K++ L++ + + + + +
Sbjct: 290 AIRRPINVAAEKDRLRNELDMAIARRDEAEAERIRSKLNQLQKMSKPI--SNNEKAAKLE 347
Query: 289 YINNRNRRKNVEEAE--KAIMVSCCCCCSGFSYRSVKSSASR 328
+N +NR +N + A K + S +G+ S + + SR
Sbjct: 348 AMNKKNRAENFKNASEMKPVNTSLKVGEAGYDPFSRRWTRSR 389
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 338 EELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIG-NNTGIPLYRV 383
+++ I L R K+ K P F +V GCFVR+GIG + +G P YR+
Sbjct: 140 DDVKSITLRRSKLVKWFMEPFFEDLVSGCFVRLGIGKSKSGTPDYRL 186
>gi|195165677|ref|XP_002023665.1| GL19928 [Drosophila persimilis]
gi|194105799|gb|EDW27842.1| GL19928 [Drosophila persimilis]
Length = 250
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 45/87 (51%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
I EI GV E G Y + TN L+LR+ + + L ISN F+ EF W D C+
Sbjct: 100 IAEIVGVEELGLGYFVDGIPTNITLRLRYNSVAMLHELNDISNMAFSLPEFQLWYDCCVN 159
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWK 215
+G++ PT + RK E+ N + + K
Sbjct: 160 QGISPPTNSLIARKKIELYNALQSEAK 186
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 338 EELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
++L +RL+R ++ +L+ P F Q V CFVR+ + P YR++E
Sbjct: 55 DQLEPLRLTRHRITQLLVRPAFEQAVTSCFVRVNVNGQGEQPEYRIAE 102
>gi|328874734|gb|EGG23099.1| hypothetical protein DFA_05229 [Dictyostelium fasciculatum]
Length = 611
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 62/127 (48%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
IG+I + K+Y + T+K L L + + F ++ +SN T +E +W +
Sbjct: 303 IGQIESIRAGTKLYKVETKETDKILVLTYAGVSKEFFIDNVSNNTITPAEHEKWITDMVR 362
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERD 248
LPT + ++ K +IQ Y + ++D+E+ +E+ + P N A K +L+ ERD
Sbjct: 363 ARQKLPTLESIQVKIGDIQKAADYIYTDDDIEKRAQERAKHGKIPVNIAFAKAKLIMERD 422
Query: 249 MAQSKGD 255
+ D
Sbjct: 423 SLEPGSD 429
Score = 42.0 bits (97), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 340 LNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
LN++RLSR + K V P F ++ G VR+ IG + P+YR+ +
Sbjct: 260 LNQVRLSRNMLLKWVDQPYFEKLTPGFLVRVVIGQHLNSPVYRIGQ 305
>gi|302816571|ref|XP_002989964.1| hypothetical protein SELMODRAFT_130799 [Selaginella moellendorffii]
gi|300142275|gb|EFJ08977.1| hypothetical protein SELMODRAFT_130799 [Selaginella moellendorffii]
Length = 523
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 80/170 (47%), Gaps = 3/170 (1%)
Query: 135 VCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFI--SNQEFTESEFIRWKDQCMTEGVA 192
E K Y T+K L G+ R + + S+Q T+ E WK +
Sbjct: 212 ATEPDKPYKFENRTTHKYLNCTWGDDSSAARWQMVRASDQAPTDDEIDAWKAEVAKSDSP 271
Query: 193 LPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERDMAQS 252
+K V K++ ++ + + V+Q+++EK+ P N A++K ++MKE +A+
Sbjct: 272 GISKSAVRDKAEALEKIASFVYSAAAVKQMLQEKKMASARPSNLALEKERVMKELSVAEG 331
Query: 253 KGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEA 302
KGD E+ L K+ +LE A++ + + I +N RNR +N + A
Sbjct: 332 KGDQEQIERLHEKLKELESLASK-QQTKNEKAERIEMMNRRNRFENFKNA 380
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 338 EELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIG-NNTGIPLYRV 383
E++ +I + R K+ K P F ++++GCFVRIGIG +N+G +YR+
Sbjct: 158 EDIRKITIRRSKLSKWFMEPFFEEVIVGCFVRIGIGMSNSGTSMYRL 204
>gi|258564851|ref|XP_002583170.1| predicted protein [Uncinocarpus reesii 1704]
gi|237906871|gb|EEP81272.1| predicted protein [Uncinocarpus reesii 1704]
Length = 622
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 62/111 (55%), Gaps = 8/111 (7%)
Query: 155 LRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEVERKSKEIQNGMMYQW 214
L HGNS++ F F S+ FTESEF R++ + EG +PTK + +K +I + + YQ
Sbjct: 351 LEHGNSKKEFPFIFCSDGPFTESEFNRYRQTMVVEGFKMPTKSVLAKKINDIHSLINYQL 410
Query: 215 KEEDVEQIVREKERFKPTPYN--YAMKKTQLMKERDMAQSKGDDEEASILQ 263
+E++E EK + + T N ++ QL K R A + GD EA+I +
Sbjct: 411 SKEELE----EKLKRQGTHDNKMAVFQRIQLQKRRQEALASGD--EAAIAE 455
>gi|125981289|ref|XP_001354651.1| GA11664 [Drosophila pseudoobscura pseudoobscura]
gi|54642962|gb|EAL31706.1| GA11664 [Drosophila pseudoobscura pseudoobscura]
Length = 247
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 45/87 (51%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
I EI GV E G Y + TN L+LR+ + + L ISN F+ EF W D C+
Sbjct: 100 IAEIVGVEELGLGYFVDGIPTNITLRLRYNSVPMLHELNDISNMAFSLPEFQLWCDCCVN 159
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWK 215
+G++ PT + RK E+ N + + K
Sbjct: 160 QGISPPTNSVIARKKIELYNALQSEAK 186
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 323 KSSASRKVIEYIETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYR 382
K S S + ++ +E +L +RL+R ++ +L+ P F Q V CFVR+ + P YR
Sbjct: 43 KPSVSDRPVKRLE---QLEPVRLTRHRITQLLVRPAFEQAVTSCFVRVNVNGQGEQPEYR 99
Query: 383 VSE 385
++E
Sbjct: 100 IAE 102
>gi|194766626|ref|XP_001965425.1| GF22456 [Drosophila ananassae]
gi|190619416|gb|EDV34940.1| GF22456 [Drosophila ananassae]
Length = 295
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 45/87 (51%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
IGEI G+ E Y + + TN L+LR+ + + ISN FT+ EF W+D C+
Sbjct: 122 IGEILGLAELDFGYKVDEIPTNIALRLRYEDLILQHEINDISNLAFTKDEFELWRDNCVN 181
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWK 215
+ + PT V RK E+ N M + K
Sbjct: 182 QAIDPPTTGMVARKRVELYNAMQSEAK 208
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 37/52 (71%)
Query: 334 IETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
I T+E+L+++RLSR+++ +L+ P F Q V GCFVR+ + + +P YR+ E
Sbjct: 73 IATREQLDQLRLSRYRISQLLVRPAFEQAVTGCFVRVNVNTDEEMPDYRIGE 124
>gi|125579594|gb|EAZ20740.1| hypothetical protein OsJ_36364 [Oryza sativa Japonica Group]
Length = 653
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 85/167 (50%), Gaps = 4/167 (2%)
Query: 164 FRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIV 223
+++ +S+ +E EF +W GV +PT+ +V K + IQ + + V++++
Sbjct: 356 WQMTQVSDSFPSEEEFKKWLQVAEKNGVRVPTRQDVLEKKEAIQQAYNFVYSAHTVQKML 415
Query: 224 REKERFKPTPYNYAMKKTQLMKERDMAQSKGDDEEASILQRKIDDLEERANELDKARTST 283
+EK+ P N A +K +L E DMA ++ D+ EA ++ K++ L++ + + +
Sbjct: 416 KEKKSAIRRPINVAAEKDRLRNELDMAIARRDEAEAERIRSKLNQLQKMSKPI--SNNEK 473
Query: 284 ISSISYINNRNRRKNVEEAE--KAIMVSCCCCCSGFSYRSVKSSASR 328
+ + +N +NR +N + A K + S +G+ S + + SR
Sbjct: 474 AAKLEAMNKKNRAENFKNASEMKPVNTSLKVGEAGYDPFSRRWTRSR 520
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 338 EELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIG-NNTGIPLYRV 383
+++ I L R K+ K P F +V GCFVR+GIG + +G P YR+
Sbjct: 271 DDVKSITLRRSKLVKWFMEPFFEDLVSGCFVRLGIGKSKSGTPDYRL 317
>gi|195403061|ref|XP_002060113.1| GJ18524 [Drosophila virilis]
gi|194140957|gb|EDW57383.1| GJ18524 [Drosophila virilis]
Length = 311
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
I EI + E + Y +GKT TN L+LR+ + L ISN FT EF W D C+
Sbjct: 137 IAEIMDITELPEGYYVGKTPTNIALQLRYEDLVMKHELNDISNMAFTREEFDFWHDNCIC 196
Query: 189 EGVALPTKDEVERKSKEIQNGM 210
+ + PT + + +K E+ N +
Sbjct: 197 QAIEWPTTELISQKKVELYNAL 218
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 35/54 (64%)
Query: 332 EYIETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
E I T E+L+ +RL+R ++E+L+H F Q V CFVR+ I +P YR++E
Sbjct: 86 EPIRTLEQLDALRLTRHRIEQLLHSTTFEQAVRSCFVRLNINPINVLPEYRIAE 139
>gi|146422167|ref|XP_001487025.1| hypothetical protein PGUG_00402 [Meyerozyma guilliermondii ATCC
6260]
Length = 539
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 99/198 (50%), Gaps = 20/198 (10%)
Query: 140 KIYSLGKTRTNKGLKL-RHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDE 198
K YS+ ++ + L + ++ N + F L S+ + E R+K + G LP D+
Sbjct: 276 KPYSVAGSKIDLYLTVTQNKNQTKEFPLTVFSDSPISTQELDRYKIELEKTGEELPYVDD 335
Query: 199 VERKSKEIQNGMMYQWKEEDVEQIVREKERFKPT--PYNYAMKKTQLMKERDMAQSKGDD 256
V K + +Q+ ++DV +++ K++ + YN +K++L+ +A+ +G+
Sbjct: 336 VNEKHELLQHLTTRGLSDKDVNEMIERKQKLQANVGGYNAVFEKSKLLDLLKIAKQEGNT 395
Query: 257 EEASILQRKIDDLEER-ANELDKARTS-TISSISYINNRNRRKNVEEAEKAIMVSCCCCC 314
+A LQ K+ LE A++ + + TS +++++S +N RNRR N + KA
Sbjct: 396 SKAESLQAKLTALENTLASQTNTSNTSESLNTMSKVNERNRRLNQKNIRKA--------- 446
Query: 315 SGFSYRSVKSSASRKVIE 332
+KSS RKV+E
Sbjct: 447 ------EIKSSQLRKVVE 458
>gi|342879007|gb|EGU80284.1| hypothetical protein FOXB_09211 [Fusarium oxysporum Fo5176]
Length = 596
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 94/190 (49%), Gaps = 27/190 (14%)
Query: 138 TGKIYSL----GKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVAL 193
T + Y+L G T++ +K HG + + F S+ +FTE+E R+K C EGV L
Sbjct: 305 TSRPYALQGPNGAFVTDQYVKAAHGKAIKEFPFIAASSGKFTENELNRYKVTCHNEGVTL 364
Query: 194 PTKDEVERKSKEIQNGMMYQWKEEDVE-QIVREKE---RFKPTPYNYAMKKTQLMKERDM 249
P+K + K EI + + W E+++ ++ R KE RF P+ + L++E
Sbjct: 365 PSKAYLMDKIDEINGLINHSWTTEEIKARLARIKELKRRFDPSERE---RIAHLLEE--- 418
Query: 250 AQSKGDDEEASILQRKIDDL------------EERANELDKARTSTISSISYINNRNRRK 297
A+ +G+ ++A LQ ++D+L + NE+ KA+T ++ N NRR
Sbjct: 419 ARQRGEHDKAEELQEELDNLGSQRLAFRTSLGSSKHNEVPKAQTEQ-DRLAERNRENRRL 477
Query: 298 NVEEAEKAIM 307
N E KA +
Sbjct: 478 NAEAVRKAQL 487
>gi|115488898|ref|NP_001066936.1| Os12g0535900 [Oryza sativa Japonica Group]
gi|113649443|dbj|BAF29955.1| Os12g0535900, partial [Oryza sativa Japonica Group]
Length = 599
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 85/167 (50%), Gaps = 4/167 (2%)
Query: 164 FRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIV 223
+++ +S+ +E EF +W GV +PT+ +V K + IQ + + V++++
Sbjct: 302 WQMTQVSDSFPSEEEFKKWLQVAEKNGVRVPTRQDVLEKKEAIQQAYNFVYSAHTVQKML 361
Query: 224 REKERFKPTPYNYAMKKTQLMKERDMAQSKGDDEEASILQRKIDDLEERANELDKARTST 283
+EK+ P N A +K +L E DMA ++ D+ EA ++ K++ L++ + + +
Sbjct: 362 KEKKSAIRRPINVAAEKDRLRNELDMAIARRDEAEAERIRSKLNQLQKMSKPI--SNNEK 419
Query: 284 ISSISYINNRNRRKNVEEAE--KAIMVSCCCCCSGFSYRSVKSSASR 328
+ + +N +NR +N + A K + S +G+ S + + SR
Sbjct: 420 AAKLEAMNKKNRAENFKNASEMKPVNTSLKVGEAGYDPFSRRWTRSR 466
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 338 EELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIG-NNTGIPLYRV 383
+++ I L R K+ K P F +V GCFVR+GIG + +G P YR+
Sbjct: 217 DDVKSITLRRSKLVKWFMEPFFEDLVSGCFVRLGIGKSKSGTPDYRL 263
>gi|170095077|ref|XP_001878759.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646063|gb|EDR10309.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 540
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 92/203 (45%), Gaps = 30/203 (14%)
Query: 128 EIGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTES---------- 177
EI ++S E K Y + N+ L+HG S R F ++ +SN F E+
Sbjct: 260 EIADLS--AEAVKPYKVNDKLVNQVFDLKHGKSIRSFNMDKVSNGPFIEASFFLFMARGI 317
Query: 178 -------EFIRWKDQCMTEGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERF- 229
EF R E V LPTK +E+K ++Q + E D+ +++ + +
Sbjct: 318 CDLLLQKEFDRLVKVYAAEDVKLPTKLHLEQKVAQLQKLISQPVTESDISAMLQRRNQVQ 377
Query: 230 --KPTPYNYAMKKTQLMKERDMAQSKGDDEEASILQRKIDDLEERANEL--DKARTSTIS 285
KPT + +++++L + R +A + D +E + D++ A E+ AR +
Sbjct: 378 NNKPTGMS-TLERSRLTQARTLAMRRHDYDEVKDI-----DIQLAAAEIVTAPARVEAVD 431
Query: 286 SISYINNRNRRKNVEEAEKAIMV 308
++ +N RNR+ N E +A M
Sbjct: 432 VLAKVNERNRKANQEAVRRAEMA 454
>gi|302770997|ref|XP_002968917.1| hypothetical protein SELMODRAFT_90698 [Selaginella moellendorffii]
gi|300163422|gb|EFJ30033.1| hypothetical protein SELMODRAFT_90698 [Selaginella moellendorffii]
Length = 523
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 80/170 (47%), Gaps = 3/170 (1%)
Query: 135 VCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFI--SNQEFTESEFIRWKDQCMTEGVA 192
E K Y T+K L G+ R + + S+Q T+ E WK +
Sbjct: 212 ATEPDKPYKFENRTTHKYLNCTWGDDSSAARWQMVRASDQAPTDDEIDAWKAEVAKSDSP 271
Query: 193 LPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERDMAQS 252
+K V K++ ++ + + V+Q+++EK+ P N A++K ++MK+ +A+
Sbjct: 272 GISKSAVRDKAEALEKIASFVYSAAAVKQMLQEKKMASARPSNLALEKERVMKDLSVAEG 331
Query: 253 KGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEA 302
KGD E+ L K+ +LE A++ + + I +N RNR +N + A
Sbjct: 332 KGDQEQIERLHEKLKELESLASK-QQTKNEKAERIEMMNRRNRFENFKNA 380
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 338 EELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIG-NNTGIPLYRV 383
E++ +I + R K+ K P F ++++GCFVRIGIG +N+G +YR+
Sbjct: 158 EDIRKITIRRSKLSKWFMEPFFEEVIVGCFVRIGIGMSNSGTSMYRL 204
>gi|195040450|ref|XP_001991072.1| GH12472 [Drosophila grimshawi]
gi|193900830|gb|EDV99696.1| GH12472 [Drosophila grimshawi]
Length = 295
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 41/83 (49%)
Query: 127 QEIGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQC 186
+ +I V E Y +GKT TN L LR+ N L ISN FT EF W D C
Sbjct: 140 HRMAQIFNVAELPLGYYVGKTATNIVLHLRYENLCVSHELNDISNMAFTREEFDFWHDNC 199
Query: 187 MTEGVALPTKDEVERKSKEIQNG 209
+ +G+ PT + V RK E+ N
Sbjct: 200 ICQGIDWPTMELVARKKIELYNA 222
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 334 IETKEELNRIRLSRFKMEKLVHLPI-FGQIVIGCFVRIGIGNNTGIPLYRVSENF 387
++T ++L+ +RL+R ++E+L+H F Q V CFVR+ I P +R+++ F
Sbjct: 92 VQTLDQLDALRLTRHRIEQLLHSSSRFDQAVQSCFVRVNINGANVPPEHRMAQIF 146
>gi|407921407|gb|EKG14556.1| Plus-3 [Macrophomina phaseolina MS6]
Length = 434
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 58/105 (55%), Gaps = 8/105 (7%)
Query: 131 EISGVCETGKIYSLGKTRTNKGLK------LRHGNSERVFRLEFISNQEFTESEFIRWKD 184
+I G E G Y++ + NK +K + HG +E+ + S+ +FTESEF RWK
Sbjct: 211 QIKGFTE-GAPYTM-QGSNNKPVKTDIYVLVAHGKAEKEWPFVMCSDSKFTESEFNRWKS 268
Query: 185 QCMTEGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERF 229
C +EGV +PT+ ++ + + I + +W EE++ +R + ++
Sbjct: 269 VCESEGVKIPTRSKLNSRLESIHALLDRRWSEEEIADKLRRQNKY 313
Score = 38.5 bits (88), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 339 ELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIG--NNTGIPLYRV 383
+ R+R+ R K+ P F +IGCF R+ IG +TG +YR+
Sbjct: 163 DFERVRVGRSNFAKVCFYPGFEHYLIGCFARVSIGLDKSTGQGVYRM 209
>gi|328863255|gb|EGG12355.1| hypothetical protein MELLADRAFT_76503 [Melampsora larici-populina
98AG31]
Length = 554
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 85/191 (44%), Gaps = 21/191 (10%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMT 188
+ E+ + K Y + T K L++ NS +V L+ +SN E+E++ +C
Sbjct: 281 VAEVKCDIDNQKYYEVENQATTKTLQVVIANSSKVISLDRVSNSPIQENEWLFLVGECQK 340
Query: 189 EGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFK-----PTPYNYAMKKTQL 243
V +PTK EV RK I + E + VR K+ + PT + ++ +L
Sbjct: 341 YKVPIPTKKEVSRKLNSITKYQDWVKDEATITLQVRAKKAMRAQGQGPTTLTIS-ERLRL 399
Query: 244 MKERDMAQSKGDDEEASILQRKIDDLEERANE-LDKARTSTISS---ISYINNRNRRKNV 299
ERD A +K D E L ER N L +A + S +S +N RNRR N
Sbjct: 400 ESERDQAAAKNDTE-----------LVERLNSLLQQASAPVVKSDTLMSELNERNRRANR 448
Query: 300 EEAEKAIMVSC 310
EE +A + +
Sbjct: 449 EEIRRAEIAAS 459
>gi|302851302|ref|XP_002957175.1| hypothetical protein VOLCADRAFT_98246 [Volvox carteri f.
nagariensis]
gi|300257425|gb|EFJ41673.1| hypothetical protein VOLCADRAFT_98246 [Volvox carteri f.
nagariensis]
Length = 635
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 107/216 (49%), Gaps = 15/216 (6%)
Query: 90 IEPEIVEVVYKKDLISSA---MFYGSVCDLTSWHIFSSHPQ-EIGEISGVCETGKIYSLG 145
+E + +++D +S M YG S ++HP I EI+ + E+G+ YS G
Sbjct: 285 LEEWFTQPFFERDALSGCVVRMAYGPGMRDAS---GNTHPGYMIMEITDIRESGRGYSFG 341
Query: 146 KTR--TNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEVERKS 203
T+K L LR G + R+ ++N F E+E+ R+K C A T++E +
Sbjct: 342 SRGEITHKHLALRDGLG--ITRVMAMAN--FDEAEYERYKRHCGRASRAPITREEAAAAA 397
Query: 204 KEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERDMAQSKGDDEEASILQ 263
++++ Y+W D++ + K + P N A +K L + ++A + G+ +E ++L+
Sbjct: 398 RKVEAATNYRWTSADLKLELERKRASRAAPVNPAAEKAMLKRRMELAAAAGNMDEVAVLE 457
Query: 264 RKIDDLEERANELDKARTSTISSISYINNRNRRKNV 299
++ LE ++ L++ + +N RN++ N+
Sbjct: 458 EQLSSLE--SHLLNQNNNKRAFGMMDLNKRNKQHNL 491
>gi|145544170|ref|XP_001457770.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124425588|emb|CAK90373.1| unnamed protein product [Paramecium tetraurelia]
Length = 447
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Query: 129 IGEISGVCETGKIYSLGKTRTNKGLKLRHG--NSERVFRLEFISNQEFTESEFIRWKDQC 186
I ++ V E K Y L +T+T K LKL+ G ++ + ISNQ+ + EF W+ +C
Sbjct: 164 IAQVLAVVEGEKSYQLEQTQTYKLLKLQFGEVKDAKLRHITLISNQQIQKQEFAVWQKRC 223
Query: 187 MTEGVALPTKDEVERKSKEI 206
G+ +P+K+ ++RK ++I
Sbjct: 224 EENGIQIPSKEYLQRKERDI 243
>gi|448079391|ref|XP_004194377.1| Piso0_004866 [Millerozyma farinosa CBS 7064]
gi|359375799|emb|CCE86381.1| Piso0_004866 [Millerozyma farinosa CBS 7064]
Length = 576
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 87/175 (49%), Gaps = 19/175 (10%)
Query: 162 RVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQ 221
+ F + S+ T E R+ + G LP D+V K + +Q+ + ++D+ +
Sbjct: 340 KTFPINIFSDSPLTSEELERYVHELNKTGEELPYLDDVNEKYEILQHMLNRGISDKDINE 399
Query: 222 IVREKERFKPT--PYNYAMKKTQLMKERDMAQSKGDDEEASILQRKIDDLEER--ANELD 277
I+ +K++ Y+ KK +L+ + +A+ D+++A+ + +KI +LE+ + +
Sbjct: 400 IMEKKQKLSSNIQSYDAVYKKARLLDQLKIAEQTNDEQKATEVAKKISELEKVLISKNMS 459
Query: 278 KARTSTISSISYINNRNRRKNVEEAEKAIMVSCCCCCSGFSYRSVKSSASRKVIE 332
+ ++S++S +N RNR+ N E KA VKSS +RKV+E
Sbjct: 460 GNNSESLSTMSKVNERNRKLNHESIRKA---------------EVKSSQARKVLE 499
>gi|310800177|gb|EFQ35070.1| plus-3 domain-containing protein [Glomerella graminicola M1.001]
Length = 612
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 92/181 (50%), Gaps = 24/181 (13%)
Query: 139 GKIYSL----GKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALP 194
GK Y++ G T++ + HG +ER F F+S++ FTE E+ R++ +EG+ LP
Sbjct: 323 GKPYAMTGPGGAFVTDQYVLAAHGKAERPFPFIFLSDRPFTEREYNRYEKVIQSEGLTLP 382
Query: 195 TKDEVERKSKEIQNGMMYQWKEEDVEQIVREK----ERFKPTPYNYAMKKTQLMKERDMA 250
K + K +I + + ++++ ++ K ++F P + +L +E ++A
Sbjct: 383 KKQTLLNKIDDINALINHHLTTTEIDERIQRKNALRKKFDPK------VRERLAQEIEVA 436
Query: 251 QSKGDDEEASILQRKIDDLEERANEL--------DKARTSTISSISYINNRNRRKNVEEA 302
+ KG+ +A LQ ++DDL + N L ++ ST S + N NR++ +E A
Sbjct: 437 RLKGNTSKAEELQEQLDDL--KTNVLAFKTSLSDTSSKPSTTSQQDRLANINRQRRLENA 494
Query: 303 E 303
E
Sbjct: 495 E 495
>gi|406604121|emb|CCH44344.1| RNA polymerase-associated protein rtf1 [Wickerhamomyces ciferrii]
Length = 537
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 95/189 (50%), Gaps = 13/189 (6%)
Query: 140 KIYSLGKTRTNKGLKLRH-GNSERVFRLEFISNQEFTESEFIRWKDQCMTEG------VA 192
K Y+LG +T++ + G ++ F + F S++ TESEF ++ +Q + + A
Sbjct: 272 KPYTLGSQKTDQQFVVSQPGKDKKNFNMSFFSDEPITESEFSKY-NQYINDANEAGKRAA 330
Query: 193 LPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPY--NYAMKKTQLMKERDMA 250
LPT E+E K +E++ + + ++ +R + F T NY +KK++L ++ +A
Sbjct: 331 LPTLREIEEKYQELKTFATKKLEGSQFDEFIRRRSMFNDTSVGANYVLKKSELTQKLQVA 390
Query: 251 QSKGDDEEASILQRKIDDLEERANELDKARTSTISS---ISYINNRNRRKNVEEAEKAIM 307
+ + D ++ LE + +K + S S+ + +N RNR+ N++ ++A +
Sbjct: 391 KDRHDTNAIRDYSERLRKLENHFQKSNKNKVSIGSNSDQFAKVNERNRKMNMKSVKEAEL 450
Query: 308 VSCCCCCSG 316
++ +G
Sbjct: 451 INTEKRRTG 459
>gi|429963976|gb|ELA45974.1| hypothetical protein VCUG_02530 [Vavraia culicis 'floridensis']
Length = 307
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 99/213 (46%), Gaps = 13/213 (6%)
Query: 94 IVEVVYKKDLISSAMFYGSVCDLTSWHIFSSHPQEIGEISGVCETGKIYSLGKTRTNKGL 153
+ + VYK A Y VC + + I E G+ V E K Y RTNK +
Sbjct: 89 LAKNVYKPMFDRLAGNYVRVCFKSGYVIKRVEGIERGDEYFVDEGTKNY-----RTNKSI 143
Query: 154 KLRHG-NSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEVERKSKEIQNGMMY 212
+ HG N+ + F+SN + + +E+ ++KD V K ++ +N M
Sbjct: 144 CILHGSNTREKIPMSFVSNSKPSFAEYDQFKDSNPDISVCALVK-----RAHSFRNLMTR 198
Query: 213 QWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERDMAQSKGDDEEASILQRKIDDLEER 272
+ + + E+ RF M+K +L++ERD A GD E+ +QR+ID+++E+
Sbjct: 199 ELSAAERKDAQEERTRFYRDKRKNLMEKIRLIRERDDAYKNGDVEKVKAVQRRIDEIDEK 258
Query: 273 ANELDKARTSTISSISYINNRNRRKNVEEAEKA 305
+ ++ + I IN +NR+ N E+ +A
Sbjct: 259 DKDPEEEKEREI--WDRINAKNRKINYEKGVRA 289
>gi|429858800|gb|ELA33607.1| RNA polymerase ii transcription elongation factor [Colletotrichum
gloeosporioides Nara gc5]
Length = 613
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 93/186 (50%), Gaps = 23/186 (12%)
Query: 139 GKIYSL----GKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALP 194
GK Y++ G T++ + HG +ER F F+S++ FTE E+ R++ +G+ +P
Sbjct: 322 GKPYAMTGPGGSFVTDQYVLAAHGKAERPFPFIFLSDRPFTEREYNRYEKVIQADGLNMP 381
Query: 195 TKDEVERKSKEIQNGMMYQWKEEDVEQIVREK----ERFKPTPYNYAMKKTQLMKERDMA 250
K + K +I + + Y ++++ ++ K ++F P + +L ++ D+A
Sbjct: 382 KKQTLLDKIDDINHLVNYHLTTTEIDERIQRKSALRKKFDPK------IRERLAQDIDIA 435
Query: 251 QSKGDDEEASILQRKIDDLEERA---------NELDKARTSTISSISYINNRNRRKNVEE 301
+++G+ +A LQ ++DDL+ ++ + TS ++ IN + R +N E
Sbjct: 436 RAQGNTRKAEDLQEQLDDLKTNVLAFKTSLSDSQSKPSATSQQDRLANINRQRRLQNAEN 495
Query: 302 AEKAIM 307
KA +
Sbjct: 496 VRKAQL 501
>gi|452824738|gb|EME31739.1| RNA polymerase-associated protein RTF1-like protein [Galdieria
sulphuraria]
Length = 605
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 62/116 (53%), Gaps = 4/116 (3%)
Query: 132 ISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGV 191
I+G+ E Y +G TNK + G+ + F +E SN+ TE+EF RW Q M +
Sbjct: 331 IAGIHEREPRYKVGGQYTNKRIICLFGSVKGEFSIERFSNKHPTEAEFDRWFKQMMNDRE 390
Query: 192 ALPTKDEVE---RKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLM 244
+PTKD+V S + + G + Q +E++++ + + E+ P NY KK +++
Sbjct: 391 TIPTKDDVNYLISLSLDYRKGNI-QVSDEELQKHIEKFEKLNPERVNYVAKKNEIL 445
>gi|326516874|dbj|BAJ96429.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 661
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 82/167 (49%), Gaps = 4/167 (2%)
Query: 164 FRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIV 223
+++ +S+ E EF W + GV +PT+ EV K + I Y + + V++++
Sbjct: 362 WQMTQVSDSPVLEEEFKEWLQEAEKNGVRIPTRQEVLEKKEAIIEAYNYVYSADTVQKML 421
Query: 224 REKERFKPTPYNYAMKKTQLMKERDMAQSKGDDEEASILQRKIDDLEERANELDKARTST 283
+ K+ P N A +K +L + +MA + DD EA ++ ++ L++ A + +
Sbjct: 422 QAKKSAVRRPMNVAAEKDRLRDQLEMALVRRDDAEAERIRARLSHLQKIAQPM--STNEK 479
Query: 284 ISSISYINNRNRRKNVEEAE--KAIMVSCCCCCSGFSYRSVKSSASR 328
+ + +N +NR +N + A KA+ S +G+ S + + SR
Sbjct: 480 AAKLEEMNRKNRAENFKNASEMKAVNTSLKAGEAGYDPFSRRWTRSR 526
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 338 EELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIG-NNTGIPLYRV 383
+++ I L R K+ K P F +V GCFVR+GIG +G P YR+
Sbjct: 277 DDVKSITLRRSKLVKWFMEPFFEDLVSGCFVRLGIGKTKSGTPKYRL 323
>gi|358388737|gb|EHK26330.1| hypothetical protein TRIVIDRAFT_114997, partial [Trichoderma virens
Gv29-8]
Length = 602
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 67/130 (51%), Gaps = 14/130 (10%)
Query: 138 TGKIYSL----GKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVAL 193
TG+ Y+L G T++ +K HG + + F S +FTE+E R+K C +GV L
Sbjct: 311 TGRPYALNGPQGSFVTDQYVKATHGKAIKEFPFIAASGGQFTENELNRYKVTCHNDGVTL 370
Query: 194 PTKDEVERKSKEIQNGMMYQWKEEDVEQIVRE----KERFKPTPYNYAMKKTQLMKERDM 249
PTKD + K +I + ++W E+++ + + ++RF P ++ +L +
Sbjct: 371 PTKDYLVEKIDDINGLINHKWTNEEIKARLTKRNELRKRFDP------QERQRLANLAEE 424
Query: 250 AQSKGDDEEA 259
A +GDD+ A
Sbjct: 425 AAQRGDDQRA 434
>gi|119497997|ref|XP_001265756.1| RNA polymerase II transcription elongation factor Rtf1p, putative
[Neosartorya fischeri NRRL 181]
gi|119413920|gb|EAW23859.1| RNA polymerase II transcription elongation factor Rtf1p, putative
[Neosartorya fischeri NRRL 181]
Length = 607
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 85/165 (51%), Gaps = 8/165 (4%)
Query: 149 TNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEVERKSKEIQN 208
TN+ L HG +ER F S+ FTE+EF R++ E + TK + +K +I
Sbjct: 340 TNQYAVLAHGKAEREFPFIACSDSPFTEAEFNRYRQTLAVEDCKMATKSMLAKKVADINR 399
Query: 209 GMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERDMAQSKGDDEEASILQRKIDD 268
+ +Q+ +E++ + +R++ + K+ + K+ +A++ GDDEE S L++++ +
Sbjct: 400 LINHQFTKEELNEKLRKQGSLDNKMRTF--KRLETEKQLKLARAAGDDEEVSRLEKELAE 457
Query: 269 LEER----ANELDKART--STISSISYINNRNRRKNVEEAEKAIM 307
L + + K RT S ++ +N RN++ N E +A +
Sbjct: 458 LTGPKLAFSTQPSKPRTEKSDYERLAELNLRNQKLNTESVRRAQL 502
>gi|315047446|ref|XP_003173098.1| hypothetical protein MGYG_05685 [Arthroderma gypseum CBS 118893]
gi|311343484|gb|EFR02687.1| hypothetical protein MGYG_05685 [Arthroderma gypseum CBS 118893]
Length = 638
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%)
Query: 155 LRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEVERKSKEIQNGMMYQW 214
L HG +ER F S FTE+EF R++ EG +PTK V+RK +I + + +
Sbjct: 361 LAHGKAERAFPFIMCSESPFTEAEFNRYRKTMAVEGFKMPTKSAVDRKVADINRLLAHDF 420
Query: 215 KEEDVEQIVR 224
+E++E+ +R
Sbjct: 421 TKEELEEKLR 430
>gi|440490288|gb|ELQ69863.1| hypothetical protein OOW_P131scaffold00114g26 [Magnaporthe oryzae
P131]
Length = 643
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 95/199 (47%), Gaps = 34/199 (17%)
Query: 132 ISGVCETGKIYSL----GKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCM 187
+ G+ + GK Y+ G+ T++ + HG + R + SNQ FTE+E+ R+K C
Sbjct: 354 VKGISK-GKEYATDGAHGQIITDQYVTAAHGKAVRDWPFIACSNQPFTENEWRRYKTTCN 412
Query: 188 TEGVALPTKDEVERKSKEIQNGMMYQWKEED----VEQIVREKERFKPTPYNYAMKKTQL 243
E V LP + V RK E+ + + + W E++ +E++ + K +F+ +L
Sbjct: 413 AESVDLPMQSAVSRKLDELHSLLKHSWTEDELSAKIERVRKLKAKFQ--------GHDRL 464
Query: 244 MKERDMAQSK--GDDEEASILQRKIDDLEE-----RANELDKARTSTISS---------- 286
E+D+A+ + G ++A L+ K++ +E R + A+ S
Sbjct: 465 QLEQDIAEYRALGMHDKAKELEDKLETMETPRLAFRTSLQPAAKKGAGSGPNGGLSQQER 524
Query: 287 ISYINNRNRRKNVEEAEKA 305
++ IN NRR+N + KA
Sbjct: 525 LAQINAENRRRNRDAVRKA 543
>gi|414587931|tpg|DAA38502.1| TPA: hypothetical protein ZEAMMB73_696161 [Zea mays]
Length = 383
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 77/146 (52%), Gaps = 3/146 (2%)
Query: 164 FRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIV 223
+R+ +S+ E EF+ W + G +PT+ EV K + IQ +++ V+Q++
Sbjct: 213 YRMCIVSDSPPKEEEFMEWLQKEDRNGACIPTQQEVLGKKEAIQEAYNFEYSAATVQQML 272
Query: 224 REKERFKPTPYNYAMKKTQLMKERDMAQSKGDDEEASILQRKIDDLEERANELDKARTST 283
R+K + P N +K +L E MA S+ ++ +A ++ K +L+ R +++ +
Sbjct: 273 RDKSVVR-HPINIVAEKDRLRSELSMALSRRNEAKAERMRVKQKNLQRRPQP--ESKDNK 329
Query: 284 ISSISYINNRNRRKNVEEAEKAIMVS 309
++++ +N +NR N + A + +V+
Sbjct: 330 VANLESMNWKNRADNFKNALELKLVN 355
>gi|440471012|gb|ELQ40049.1| hypothetical protein OOU_Y34scaffold00462g3 [Magnaporthe oryzae
Y34]
Length = 635
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 95/199 (47%), Gaps = 34/199 (17%)
Query: 132 ISGVCETGKIYSL----GKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCM 187
+ G+ + GK Y+ G+ T++ + HG + R + SNQ FTE+E+ R+K C
Sbjct: 355 VKGISK-GKEYATDGAHGQIITDQYVTAAHGKAVRDWPFIACSNQPFTENEWRRYKTTCN 413
Query: 188 TEGVALPTKDEVERKSKEIQNGMMYQWKEED----VEQIVREKERFKPTPYNYAMKKTQL 243
E V LP + V RK E+ + + + W E++ +E++ + K +F+ +L
Sbjct: 414 AESVDLPMQSAVSRKLDELHSLLKHSWTEDELSAKIERVRKLKAKFQ--------GHDRL 465
Query: 244 MKERDMAQSK--GDDEEASILQRKIDDLEE-----RANELDKARTSTISS---------- 286
E+D+A+ + G ++A L+ K++ +E R + A+ S
Sbjct: 466 QLEQDIAEYRALGMHDKAKELEDKLETMETPRLAFRTSLQPAAKKGAGSGPNGGLSQQER 525
Query: 287 ISYINNRNRRKNVEEAEKA 305
++ IN NRR+N + KA
Sbjct: 526 LAQINAENRRRNRDAVRKA 544
>gi|403217320|emb|CCK71814.1| hypothetical protein KNAG_0I00230 [Kazachstania naganishii CBS
8797]
Length = 571
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 98/213 (46%), Gaps = 14/213 (6%)
Query: 140 KIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEV 199
K Y++GK TN+ + G +VF++ F S+ FT++E+ R+ T ++ P+ +
Sbjct: 310 KPYNMGKFYTNQYFGVTQGKDRKVFQMNFFSDGHFTQNEYERYLRSLETANISRPSAHIL 369
Query: 200 ERKSKEIQNGMMYQWKEEDVEQIVREKERF--KPTPYNYAMKKTQLMKERDMAQSKGDDE 257
KSKEI + + E+ ++IVR + F K + N ++KT L + A+ ++
Sbjct: 370 SNKSKEIVSFITEPLTEKLTDEIVRNRMLFNKKLSGTNAVLEKTVLRSKLQYARESNNER 429
Query: 258 EASILQRKIDDLEERAN------ELDKARTSTISSISYIN---NRNRRKNVEEAEKAIMV 308
+ + ++ + E+R N E D T + +++ N N + KN + +K
Sbjct: 430 DVAKYSAQLRNFEKRMNNYEKHHENDHTGTKKLGALTSKNRKVNMGKTKNYDHGKKEDSA 489
Query: 309 SCCCCCSGFSYRSVKSSASRKVIEYIETKEELN 341
+ +K +R I Y E ++E N
Sbjct: 490 GPTVDSKSDPFSRLK---TRTKIYYQEVQKEEN 519
>gi|302912762|ref|XP_003050771.1| hypothetical protein NECHADRAFT_41415 [Nectria haematococca mpVI
77-13-4]
gi|256731709|gb|EEU45058.1| hypothetical protein NECHADRAFT_41415 [Nectria haematococca mpVI
77-13-4]
Length = 607
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 91/190 (47%), Gaps = 27/190 (14%)
Query: 138 TGKIYSL----GKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVAL 193
T + Y+L G T++ +K HG + + F S+ +F+++E R+K C EGV L
Sbjct: 315 TSRPYALNGPNGTFVTDQYVKAAHGKAIKEFPFIAASSGKFSDAELNRYKVTCHNEGVTL 374
Query: 194 PTKDEVERKSKEIQNGMMYQWKEEDVEQIVRE----KERFKPTPYNYAMKKTQLMKERDM 249
PTK + K EI + + W E+++ +++ K+RF P + +++++E
Sbjct: 375 PTKAYLLDKIDEINKLINHSWTSEEIKGRLKKIKDLKKRFDPAERE---RVSRILEE--- 428
Query: 250 AQSKGDDEEASILQRKIDDL------------EERANELDKARTSTISSISYINNRNRRK 297
A+ +GDD + LQ ++D L + +E K + S ++ N NRR
Sbjct: 429 ARERGDDAKVEELQEELDKLGTQRLAFRTSLGPSKLSEAPKGQ-SEQDRLAERNRENRRL 487
Query: 298 NVEEAEKAIM 307
N E KA +
Sbjct: 488 NAEAVRKAQL 497
>gi|326436130|gb|EGD81700.1| hypothetical protein PTSG_02413 [Salpingoeca sp. ATCC 50818]
Length = 645
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 5/83 (6%)
Query: 129 IGEISGVCETGKIYSL--GKTRTNKG--LKLRHGNSERVFRLEFISNQEFTESEFIRWKD 184
+G+I V E ++Y L G+ RT + ++HG S R FR+ F+SN + EF++W+
Sbjct: 240 LGQIVRV-EEKRLYELRDGRERTKTRFYVLVQHGRSRRPFRMSFVSNGPILQKEFMKWQA 298
Query: 185 QCMTEGVALPTKDEVERKSKEIQ 207
+ +A PT D+V RK E++
Sbjct: 299 AIEKDNMAFPTADDVSRKRAELE 321
>gi|121710816|ref|XP_001273024.1| RNA polymerase II transcription elongation factor Rtf1p, putative
[Aspergillus clavatus NRRL 1]
gi|119401174|gb|EAW11598.1| RNA polymerase II transcription elongation factor Rtf1p, putative
[Aspergillus clavatus NRRL 1]
Length = 605
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Query: 149 TNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEVERKSKEIQN 208
TN+ L HG +ER F S+ FTE+EF R++ E + TK + K +I
Sbjct: 337 TNQYAVLAHGKAEREFPFVACSDSPFTEAEFSRYRQTMAVEDCKIATKSTLAEKVADINR 396
Query: 209 GMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERDMAQSKGDDEEASILQRKIDD 268
+ +Q+ +E++ + +R++ + K+ + K+ +A++ GDDEE S L++++ +
Sbjct: 397 LLNHQFTKEELNEKLRKQGSLDNKMRTF--KRLETEKQLKLARAAGDDEEVSKLEKELAE 454
Query: 269 L 269
L
Sbjct: 455 L 455
>gi|50289403|ref|XP_447133.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526442|emb|CAG60066.1| unnamed protein product [Candida glabrata]
Length = 566
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 109/243 (44%), Gaps = 11/243 (4%)
Query: 140 KIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEV 199
K Y++GK TN+ + G +VF++ F S+ F E EF R+ + + P+ +
Sbjct: 307 KPYNMGKFFTNQYFGVTQGKDRKVFQMNFFSDGPFVEQEFERYLKALDSSNIPKPSPYNI 366
Query: 200 ERKSKEIQNGMMYQWKEEDVEQIVREKERF--KPTPYNYAMKKTQLMKERDMAQSKGDDE 257
+ K KEI + E+ ++IVR + K + N ++KT L + A+ G++
Sbjct: 367 KTKFKEISEFISQPLTEKLTDEIVRNRMVLNKKLSGTNAVLEKTILKDKLRYAKENGNEH 426
Query: 258 EASILQRKIDDLE------ERANELDKARTSTISSISYIN---NRNRRKNVEEAEKAIMV 308
+ + +++ + E E+ +E D+A + ++ N N NR +N E +K V
Sbjct: 427 DIAKYSKQLRNFEKRMAMYEKHHENDQADIKKLEGLTSKNRKLNMNRIRNAESIKKEEDV 486
Query: 309 SCCCCCSGFSYRSVKSSASRKVIEYIETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFV 368
+ FS ++ + I+ E ++ + K+++ Q+++ F
Sbjct: 487 NFDSKSDPFSRLKTRTKVYYQEIQKEENEKAKEEAAQEQLKIDEETKKEKEKQLMLAEFR 546
Query: 369 RIG 371
R+G
Sbjct: 547 RLG 549
>gi|70988949|ref|XP_749325.1| RNA polymerase II transcription elongation factor Rtf1p, putative
[Aspergillus fumigatus Af293]
gi|66846956|gb|EAL87287.1| RNA polymerase II transcription elongation factor Rtf1p, putative
[Aspergillus fumigatus Af293]
gi|159128739|gb|EDP53853.1| RNA polymerase II transcription elongation factor Rtf1p, putative
[Aspergillus fumigatus A1163]
Length = 607
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 66/121 (54%), Gaps = 2/121 (1%)
Query: 149 TNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEVERKSKEIQN 208
TN+ L HG +ER F S+ FTE+EF R++ E + TK + +K +I
Sbjct: 340 TNQYAVLAHGKAEREFPFIACSDSPFTEAEFNRYRQTMAVEDCKMATKSMLAKKVADINR 399
Query: 209 GMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERDMAQSKGDDEEASILQRKIDD 268
+ +Q+ +E++ + +R++ + K+ + K+ +A++ GDDEE S L++++ +
Sbjct: 400 LINHQFTKEELNEKLRKQGSLDNKMRTF--KRLETEKQLKLARAAGDDEEVSRLEKELAE 457
Query: 269 L 269
L
Sbjct: 458 L 458
>gi|346326272|gb|EGX95868.1| RNA polymerase II transcription elongation factor Rtf1p, putative
[Cordyceps militaris CM01]
Length = 607
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 87/196 (44%), Gaps = 32/196 (16%)
Query: 138 TGKIYSL----GKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVAL 193
TG+ Y+L G T++ +K HG + + F S+ +FTE+E R++ C E V
Sbjct: 301 TGRAYALSGPNGTFVTDQYVKAAHGKAVKEFPFIAASSGKFTENEMNRYQVTCHNENVKT 360
Query: 194 PTKDEVERKSKEIQNGMMYQWKEEDVE-QIVREKE---RFKPTPYNYAMKKTQLMKERDM 249
P K + K +I N + + W E+++ ++ R E RF P + +L++E
Sbjct: 361 PIKTVLNSKIDQINNLLTHNWTNEEIKARVARRNELRKRFDPAER---ARVARLLEE--- 414
Query: 250 AQSKGDDEEASILQRKIDDLEER----ANELDKARTSTISS--------------ISYIN 291
A GDD+ LQ ++D L + L A++S S ++ N
Sbjct: 415 ATVGGDDDRMQELQEELDKLGSQRLAFKTSLGPAKSSAYDSNGGAITKMSTEQDRLAARN 474
Query: 292 NRNRRKNVEEAEKAIM 307
NRR N E KA +
Sbjct: 475 KENRRMNQEGVRKAQL 490
>gi|212536742|ref|XP_002148527.1| RNA polymerase II transcription elongation factor Rtf1p, putative
[Talaromyces marneffei ATCC 18224]
gi|210070926|gb|EEA25016.1| RNA polymerase II transcription elongation factor Rtf1p, putative
[Talaromyces marneffei ATCC 18224]
Length = 648
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 63/112 (56%), Gaps = 2/112 (1%)
Query: 155 LRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEVERKSKEIQNGMMYQW 214
L HG +ER F S+ FTE+EF RW+ + E +PTK + K +I N + Y++
Sbjct: 379 LAHGKAEREFPFIQCSDSPFTETEFNRWRQTMVVEDCKVPTKSMLAAKVVDINNLINYKF 438
Query: 215 KEEDVEQIVREKERFKPTPYNYAMKKTQLMKERDMAQSKGDDEEASILQRKI 266
E++E+ +R++ +K+ +L ++ + A ++G+D+E + LQ ++
Sbjct: 439 TPEELEEKLRKQ--GADNANEKLLKRFELERKLNEAIAQGNDDEVANLQAQL 488
>gi|307108722|gb|EFN56961.1| hypothetical protein CHLNCDRAFT_143537 [Chlorella variabilis]
Length = 641
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 64/123 (52%)
Query: 148 RTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEVERKSKEIQ 207
+T+K L + GNS+R L +SNQ FT++EF W+ + ++ V +
Sbjct: 347 KTHKWLLVERGNSQRGMPLAQVSNQGFTQAEFESWQRTLKEQHRPQVSRRTVTETHGRLV 406
Query: 208 NGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERDMAQSKGDDEEASILQRKID 267
Y + EDV ++++EK+ P N A+++ +L + A+ G++E+ + L+ ++
Sbjct: 407 KANTYTYTAEDVSRLLQEKKAKGQAPRNMALERARLEAQLAGARENGEEEKVAELEAQMA 466
Query: 268 DLE 270
LE
Sbjct: 467 QLE 469
>gi|358055605|dbj|GAA98436.1| hypothetical protein E5Q_05122 [Mixia osmundae IAM 14324]
Length = 557
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 62/128 (48%), Gaps = 2/128 (1%)
Query: 129 IGEISGVCETGKIYSLGKT-RTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCM 187
+ I V E +Y L +T+K LKL HG++ER+F + +SN +SE R K +
Sbjct: 310 LSRILSVEEAPTLYRLEDNCKTDKALKLAHGSAERIFEISKVSNSPAADSEVRRLKSVLL 369
Query: 188 TEGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKER 247
+E T +VE+K +Q + E D+ + + Y +K +L++ER
Sbjct: 370 SEKRKPITARQVEQKLPILQRYAQHAPTEADITTRI-NVNKLDDAEYERPRRKARLLEER 428
Query: 248 DMAQSKGD 255
A++K D
Sbjct: 429 AAAEAKKD 436
>gi|340517417|gb|EGR47661.1| predicted protein [Trichoderma reesei QM6a]
Length = 524
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 108/268 (40%), Gaps = 48/268 (17%)
Query: 138 TGKIYSL----GKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVAL 193
T + Y+L G T++ +K HG + + F S FTE+E R+K C +GV L
Sbjct: 259 TSRPYALNGPQGSFVTDQYVKAAHGKAVKEFPFIAASGGSFTEAELNRYKVTCNNDGVPL 318
Query: 194 PTKDEVERKSKEIQNGMMYQWKEEDVEQIVRE----KERFKPTPYNYAMKKTQLMKERDM 249
PTK+ + K +I + ++W E+++ + + ++RF P ++ +L +
Sbjct: 319 PTKEFLVNKIDDINALINHKWTNEEIKARLAKRNELRKRFDP------QERQRLANLVEE 372
Query: 250 AQSKGDDEEASILQRKIDDL------------EERANELDKARTSTISSISYINNRNRRK 297
A +GDD+ LQ +++ L + E KA +S ++ N NRR
Sbjct: 373 AARRGDDQRVEELQAELEKLGRERLAFKTSLGPSKNPEATKA-SSEQDRLAERNRENRRL 431
Query: 298 NVEEAEKAIMVSCCCC------------------CSGFSYRSVKSSASRKVIEYIETKEE 339
N E KA + S + K +S +++ ++ +
Sbjct: 432 NQEAVRKAQLKEKAKAREIEMALKRGEPEAPKDNGSAAATNGTKGPSSSQILPHL---AK 488
Query: 340 LNRIRLSRFKMEKLVHLPIFGQIVIGCF 367
L S K +H PI VIG
Sbjct: 489 LQEKHYSENKGLPTIHKPIMDDDVIGAL 516
>gi|323449838|gb|EGB05723.1| hypothetical protein AURANDRAFT_72169 [Aureococcus anophagefferens]
Length = 675
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 1/86 (1%)
Query: 126 PQ-EIGEISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKD 184
PQ ++ EI V E Y G+ T K L LR G ++R++R+ ISN FT++E W+
Sbjct: 252 PQYKVCEIISVDEYKHAYPFGEFETRKALMLRIGRNQRLWRMSVISNHRFTDAELQEWQS 311
Query: 185 QCMTEGVALPTKDEVERKSKEIQNGM 210
TE +P+ E+ R+ +++ +
Sbjct: 312 IMRTERQKIPSVIEINRRKAQMRKAV 337
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 340 LNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIP 379
L ++RL R +EK V P F + V+GCFVR+G+G P
Sbjct: 203 LGKLRLPRSLLEKWVEEPFFEKAVVGCFVRLGVGKIPASP 242
>gi|85085889|ref|XP_957595.1| hypothetical protein NCU03956 [Neurospora crassa OR74A]
gi|28918688|gb|EAA28359.1| predicted protein [Neurospora crassa OR74A]
gi|40882327|emb|CAF06149.1| related to Pol II transcription elongation factor [Neurospora
crassa]
Length = 601
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 88/183 (48%), Gaps = 15/183 (8%)
Query: 138 TGKIYSLGKTRTNKGL-----KLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVA 192
TGK Y+L + ++ + K HG + R + L S+++FTE+E+ R+K C+ EGV
Sbjct: 310 TGKAYALEDHQGHQMVVDMYVKAAHGKAVREWPLITCSDRKFTEAEYNRYKQVCLAEGVP 369
Query: 193 LPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERDMAQS 252
P K + K +I + W E+++ ++ + + ++ A ++ L K+ D+A+
Sbjct: 370 FPDKQTLVDKIDDINRLVQRTWTEQELSDKLKRQNALQ-AKFSGAQREY-LKKQLDIARQ 427
Query: 253 KGDDEEASILQRKIDDLE--------ERANELDKARTSTISSISYINNRNRRKNVEEAEK 304
D+ + Q +++ LE + K + ++ N NRR+N EE K
Sbjct: 428 ANDEAAIARYQERLEKLEVPRLAFRTSLTKKDGKKELTQQEKLALKNMENRRRNAEEVRK 487
Query: 305 AIM 307
A +
Sbjct: 488 AQL 490
>gi|336466374|gb|EGO54539.1| hypothetical protein NEUTE1DRAFT_124773 [Neurospora tetrasperma
FGSC 2508]
gi|350286761|gb|EGZ68008.1| plus-3-domain-containing protein [Neurospora tetrasperma FGSC 2509]
Length = 601
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 88/183 (48%), Gaps = 15/183 (8%)
Query: 138 TGKIYSLGKTRTNKGL-----KLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVA 192
TGK Y+L + ++ + K HG + R + L S+++FTE+E+ R+K C+ EGV
Sbjct: 310 TGKAYALEDHQGHQMVVDMYVKAAHGKAVREWPLITCSDRKFTEAEYNRYKQVCLAEGVP 369
Query: 193 LPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERDMAQS 252
P K + K +I + W E+++ ++ + + ++ A ++ L K+ D+A+
Sbjct: 370 FPDKQTLVDKINDINRLVQRTWTEQELSDKLKRQNALQ-AKFSGAQREY-LKKQLDIARQ 427
Query: 253 KGDDEEASILQRKIDDLE--------ERANELDKARTSTISSISYINNRNRRKNVEEAEK 304
D+ + Q +++ LE + K + ++ N NRR+N EE K
Sbjct: 428 ANDEAAIARYQERLEKLEVPRLAFRTSLTKKDGKKELTQQEKLALKNMENRRRNAEEVRK 487
Query: 305 AIM 307
A +
Sbjct: 488 AQL 490
>gi|242796736|ref|XP_002482863.1| RNA polymerase II transcription elongation factor Rtf1p, putative
[Talaromyces stipitatus ATCC 10500]
gi|218719451|gb|EED18871.1| RNA polymerase II transcription elongation factor Rtf1p, putative
[Talaromyces stipitatus ATCC 10500]
Length = 647
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 74/133 (55%), Gaps = 7/133 (5%)
Query: 139 GKIYSL----GKTR-TNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVAL 193
G+ Y+L G+T T++ L HG +ER F S+ FTE+EF RW+ + E +
Sbjct: 357 GRPYALEGANGRTYVTDQYAVLAHGKAEREFPFIQCSDSPFTEAEFNRWRQTMVVEDCKI 416
Query: 194 PTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERDMAQSK 253
PTK + K +I N + Y++ E++E+ +R++ +++ +L ++ + A ++
Sbjct: 417 PTKSMLAAKVVDINNLINYKFTPEELEEKLRKQ--GADNANEKLLRRFELERKLNEAIAQ 474
Query: 254 GDDEEASILQRKI 266
G+D+E + +Q ++
Sbjct: 475 GNDDEVASIQAQL 487
>gi|302683478|ref|XP_003031420.1| hypothetical protein SCHCODRAFT_16179 [Schizophyllum commune H4-8]
gi|300105112|gb|EFI96517.1| hypothetical protein SCHCODRAFT_16179 [Schizophyllum commune H4-8]
Length = 540
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 89/208 (42%), Gaps = 30/208 (14%)
Query: 131 EISGVCETGKIYSL-GKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTE 189
E+ ET K Y++ G + + LRHG++ R + ++ +SN + ++ EF R K
Sbjct: 269 EVVDFEETKKPYAIDGSKYIDFDVVLRHGDAARTWAMDKVSNSKPSDREFARAKIVWQKA 328
Query: 190 GVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKER-- 247
+ PT D + RKS+E++ + EE++ + + K + + +L+ ER
Sbjct: 329 RLPFPTHDTIARKSEEMRRFVSKPVTEEEITYMTKRGRELKQRVFGNQLTGIELVSERAR 388
Query: 248 -----DMAQSKGDDEEASILQRKIDDL----------------------EERANELDKAR 280
+A+++ D +E LQ+++ L N +
Sbjct: 389 LEQALSLAEARRDFDEVDALQKQLAALAGPNGVSAPPSSSRPAADTPPPSSLQNGGSAGK 448
Query: 281 TSTISSISYINNRNRRKNVEEAEKAIMV 308
+ + ++ +N RNRR N E KA +
Sbjct: 449 QNAVDIVAMVNERNRRANAEAIRKAELA 476
>gi|168017180|ref|XP_001761126.1| Paf1 complex protein [Physcomitrella patens subsp. patens]
gi|162687812|gb|EDQ74193.1| Paf1 complex protein [Physcomitrella patens subsp. patens]
Length = 568
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 63/109 (57%), Gaps = 1/109 (0%)
Query: 194 PTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERDMAQSK 253
P K +V K I + + V+Q+++EK+ P N A++K +L+KE +A+SK
Sbjct: 310 PLKVDVLEKKAAISKVNQFVYSASTVKQMLQEKKMAASRPANVALEKDRLIKELGIAESK 369
Query: 254 GDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEA 302
G+ E LQ ++ +LE AN++ K++ + +++ +N RN+ +N + A
Sbjct: 370 GEHAEVEKLQSRLKELELFANQV-KSKDAKAMALAEMNRRNKMENFKNA 417
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 336 TKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIG-NNTGIPLYRV 383
T++E+ I + R K+ K P F +I++GCFVRIGIG +++G +YRV
Sbjct: 193 TEDEIKDIVIRRSKLAKWFMEPFFEEIIVGCFVRIGIGVSSSGQSIYRV 241
>gi|195446830|ref|XP_002070942.1| GK25522 [Drosophila willistoni]
gi|194167027|gb|EDW81928.1| GK25522 [Drosophila willistoni]
Length = 365
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 39/78 (50%)
Query: 133 SGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVA 192
S V GK G TN L+LR+ + + L ISN F+ EF W+D C+ + +
Sbjct: 165 SPVEAGGKGNRNGSLPTNMALRLRYDDVIKQHELTEISNMPFSRREFELWRDNCINQAIE 224
Query: 193 LPTKDEVERKSKEIQNGM 210
PT + + RK E+ N +
Sbjct: 225 PPTSETIARKKIELYNAL 242
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 334 IETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTG--IPLYRVSE 385
+ T E+L ++RLSR ++E+L+ P F Q V CFVR+ I +P YR++E
Sbjct: 97 VRTLEQLEQLRLSRHRLEQLLLRPAFEQAVSNCFVRVHINAEATAEMPEYRIAE 150
>gi|389640719|ref|XP_003717992.1| hypothetical protein MGG_00958 [Magnaporthe oryzae 70-15]
gi|351640545|gb|EHA48408.1| hypothetical protein MGG_00958 [Magnaporthe oryzae 70-15]
Length = 591
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 95/199 (47%), Gaps = 34/199 (17%)
Query: 132 ISGVCETGKIYSL----GKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCM 187
+ G+ + GK Y+ G+ T++ + HG + R + SNQ FTE+E+ R+K C
Sbjct: 311 VKGISK-GKEYATDGAHGQIITDQYVTAAHGKAVRDWPFIACSNQPFTENEWRRYKTTCN 369
Query: 188 TEGVALPTKDEVERKSKEIQNGMMYQWKEED----VEQIVREKERFKPTPYNYAMKKTQL 243
E V LP + V RK E+ + + + W E++ +E++ + K +F+ +L
Sbjct: 370 AESVDLPMQSAVSRKLDELHSLLKHSWTEDELSAKIERVRKLKAKFQ--------GHDRL 421
Query: 244 MKERDMAQSK--GDDEEASILQRKIDDLEE-----RANELDKARTSTISS---------- 286
E+D+A+ + G ++A L+ K++ +E R + A+ S
Sbjct: 422 QLEQDIAEYRALGMHDKAKELEDKLETMETPRLAFRTSLQPAAKKGAGSGPNGGLSQQER 481
Query: 287 ISYINNRNRRKNVEEAEKA 305
++ IN NRR+N + KA
Sbjct: 482 LAQINAENRRRNRDAVRKA 500
>gi|255944551|ref|XP_002563043.1| Pc20g05030 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211587778|emb|CAP85832.1| Pc20g05030 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 609
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 92/193 (47%), Gaps = 18/193 (9%)
Query: 129 IGEISGVCETGKIYSL----GKT-RTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWK 183
+G I+G+ + GK Y+L G++ T++ +KL HG + R F SN TE+E+ R+
Sbjct: 315 LGLITGISQ-GKPYALEGENGRSFVTDQYVKLAHGKAVRDFPFVTFSNSPLTEAEYRRYV 373
Query: 184 DQCMTEGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQL 243
E + TK +VE K +I + + + E++ + +R + F + + +L
Sbjct: 374 QTLAVEDCKMATKSKVESKVADINRLLNHTFTREELNEKLRRQGAFDEK--KNVLNRLEL 431
Query: 244 MKERDMAQSKGDDEEASILQRKIDDLEERA---------NELDKARTSTISSISYINNRN 294
+ + A+ G+ EEA ++ ++ L A E DK S + IN RN
Sbjct: 432 ERNLEFAKVNGNVEEAEKIEAELQKLATPALSWGTSLVKKEADKG-LSEAERVHQINLRN 490
Query: 295 RRKNVEEAEKAIM 307
++ N+E +A +
Sbjct: 491 QKLNIENGRRAQL 503
>gi|119191093|ref|XP_001246153.1| hypothetical protein CIMG_05594 [Coccidioides immitis RS]
gi|392868999|gb|EAS30358.2| hypothetical protein CIMG_05594 [Coccidioides immitis RS]
Length = 622
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 60/111 (54%), Gaps = 8/111 (7%)
Query: 155 LRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEVERKSKEIQNGMMYQW 214
L HG S++ F F S+ FTESEF R++ + EG +PTK + +K +I + Y+
Sbjct: 351 LEHGKSKKEFPYIFCSDSPFTESEFNRYRQTMVVEGFKMPTKSVLNKKIDDIHFLINYRL 410
Query: 215 KEEDVEQIVREKERFKPTPYN--YAMKKTQLMKERDMAQSKGDDEEASILQ 263
+E++E EK + + T N ++ QL K R A + GD EA+I +
Sbjct: 411 SKEELE----EKLKRQGTHDNKMAVFQRLQLQKRRQEAVATGD--EAAIAE 455
>gi|303315507|ref|XP_003067761.1| Plus-3 domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|240107431|gb|EER25616.1| Plus-3 domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|320035390|gb|EFW17331.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
Length = 622
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 60/111 (54%), Gaps = 8/111 (7%)
Query: 155 LRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEVERKSKEIQNGMMYQW 214
L HG S++ F F S+ FTESEF R++ + EG +PTK + +K +I + Y+
Sbjct: 351 LEHGKSKKEFPYIFCSDSPFTESEFNRYRQTMVVEGFKMPTKSVLNKKIDDIHFLINYRL 410
Query: 215 KEEDVEQIVREKERFKPTPYN--YAMKKTQLMKERDMAQSKGDDEEASILQ 263
+E++E EK + + T N ++ QL K R A + GD EA+I +
Sbjct: 411 SKEELE----EKLKRQGTHDNKMAVFQRLQLQKRRQEAVATGD--EAAIAE 455
>gi|336260093|ref|XP_003344843.1| hypothetical protein SMAC_06127 [Sordaria macrospora k-hell]
gi|380089040|emb|CCC12984.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 601
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 88/183 (48%), Gaps = 15/183 (8%)
Query: 138 TGKIYSLGKTRTNKGL-----KLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVA 192
TGK Y+L + ++ + K HG + R + L S+++FT++EF R+K C+ EGV
Sbjct: 310 TGKAYALEDHQGHQMVVDMYVKAAHGKAVREWPLITCSDRKFTDAEFNRYKQVCLNEGVP 369
Query: 193 LPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERDMAQS 252
P K + K +I + W E+++ ++ + + ++ A ++ + K+ D+A+
Sbjct: 370 FPDKQTLIDKIDDINRLVQRTWTEQELSDKLKRQNALQ-AKFSGA-QRDYIKKQLDIARQ 427
Query: 253 KGDDEEASILQRKIDDLE--------ERANELDKARTSTISSISYINNRNRRKNVEEAEK 304
D+ + Q +++ LE + K + ++ N NRRKN EE K
Sbjct: 428 ANDEAAIARYQERLEKLEVPRLAFRTSLTKKDGKKDLTQQEKLALKNMENRRKNAEEVRK 487
Query: 305 AIM 307
A +
Sbjct: 488 AQL 490
>gi|449545910|gb|EMD36880.1| hypothetical protein CERSUDRAFT_114800 [Ceriporiopsis subvermispora
B]
Length = 539
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 91/184 (49%), Gaps = 9/184 (4%)
Query: 131 EISGVCETG-KIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTE 189
EI V +TG K Y + N+ ++L++G + + F ++ SN FT +E+ +
Sbjct: 263 EIVEVSQTGAKSYEINGRVFNQEIELKYGGAVKRFPMDKASNGPFTTTEYEHLLKTLTND 322
Query: 190 GVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERF--KPTPYNYAMKKTQLMKER 247
A+PTK ++E K +I + E DV ++ K K + + M++++L + R
Sbjct: 323 RAAVPTKRQLETKRAQIVDLPNRPMTESDVSAMLARKRNMQGKQSAASMTMERSRLSQAR 382
Query: 248 DMAQSKGDDEEASILQRKIDDL-EERANELDKARTSTISSISYINNRNRRKNVEEAEKAI 306
+A + D +E + ++ +L R++ DKA ++ +N RNR+ N+E +A
Sbjct: 383 TLALRRQDYDEVKQIDAQLAELTPARSDREDKA-----DILAKVNERNRKANMEAVRRAE 437
Query: 307 MVSC 310
++
Sbjct: 438 ILEA 441
>gi|170587234|ref|XP_001898383.1| MGC89486 protein [Brugia malayi]
gi|158594209|gb|EDP32795.1| MGC89486 protein, putative [Brugia malayi]
Length = 221
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 35/47 (74%)
Query: 250 AQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRR 296
A+ G+ EE +LQ++IDDLE RA EL++ R+ +I IS+IN RNR+
Sbjct: 6 AEQYGNVEEVQLLQQQIDDLETRAAELERRRSQSIRGISWINQRNRQ 52
>gi|430813217|emb|CCJ29416.1| unnamed protein product [Pneumocystis jirovecii]
Length = 333
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 129 IGEIS-GVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCM 187
IGE S G+ + K+YS +N+ ++ HG + + F + F+SN T+ EF RW Q
Sbjct: 257 IGENSQGLQTSPKVYSFEGILSNQKIECIHGANIKAFEITFVSNSAITQKEFDRWTQQLK 316
Query: 188 TEGVALPTKDEVERKS 203
+ +A P K +E+K+
Sbjct: 317 QDKIAAPKKSLIEKKN 332
Score = 41.6 bits (96), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%)
Query: 339 ELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNT 376
++N RL R K + P+F + +IGCF RI IG N+
Sbjct: 224 DVNNTRLGRKHFAKFLFHPLFEETIIGCFARIKIGENS 261
>gi|356505765|ref|XP_003521660.1| PREDICTED: RNA polymerase-associated protein C651.09c-like [Glycine
max]
Length = 664
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 334 IETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRV 383
+ T E + I + R K+ K ++ P F ++++GCFVRIGIG +P+YR+
Sbjct: 277 MPTFENIRDITIRRSKLVKWLNEPFFDELIVGCFVRIGIGKLENVPVYRL 326
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 58/112 (51%)
Query: 159 NSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEVERKSKEIQNGMMYQWKEED 218
NS + F++ +S+ E EF +W + +P+K V K + I+ Y +
Sbjct: 360 NSAKKFQMAVVSDSAPLEKEFRQWVREHERTCSQMPSKMSVLEKKEAIRRTSKYVYSAAT 419
Query: 219 VEQIVREKERFKPTPYNYAMKKTQLMKERDMAQSKGDDEEASILQRKIDDLE 270
V+Q++ EK+ P N A++K +L ++A+SK D+ E + +K+ +LE
Sbjct: 420 VKQMLEEKKSVPSRPLNVAVEKDRLKNLLEVAKSKNDEAEMDRILKKLVELE 471
>gi|156055230|ref|XP_001593539.1| hypothetical protein SS1G_04966 [Sclerotinia sclerotiorum 1980]
gi|154702751|gb|EDO02490.1| hypothetical protein SS1G_04966 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 627
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 79/156 (50%), Gaps = 8/156 (5%)
Query: 157 HGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEVERKSKEIQNGMMYQWKE 216
HG SER + S+ FTE+E+ R+K C+ +G+ +PTK ++ +K EI + W E
Sbjct: 362 HGKSERSWPFIACSDSRFTEAEWQRYKQNCIADGIPVPTKPKLMQKCAEINALVNRPWTE 421
Query: 217 EDVEQIVREK----ERFKPTP---YNYAMKKTQLMKERDMAQSKGDDEEASILQRKIDDL 269
++++ +++ E++ T N A+K+ + + +M + + EA + K+
Sbjct: 422 AELQEKLKKSGVLTEKWNATERVRLNNAIKEQKALGNTEMEEKYRSELEA-LENSKLAYG 480
Query: 270 EERANELDKARTSTISSISYINNRNRRKNVEEAEKA 305
+ K S ++ +N NRRKN+EE +A
Sbjct: 481 TTLKSTPKKMVHSQQDRLAELNRLNRRKNIEEVRQA 516
>gi|402584896|gb|EJW78837.1| hypothetical protein WUBG_10255, partial [Wuchereria bancrofti]
Length = 210
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 35/47 (74%)
Query: 250 AQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRR 296
A+ G+ EE +LQ++IDDLE RA EL++ R+ +I IS+IN RNR+
Sbjct: 3 AEQYGNVEEVQLLQQQIDDLETRAAELERRRSQSIRGISWINQRNRQ 49
>gi|260942495|ref|XP_002615546.1| hypothetical protein CLUG_04428 [Clavispora lusitaniae ATCC 42720]
gi|238850836|gb|EEQ40300.1| hypothetical protein CLUG_04428 [Clavispora lusitaniae ATCC 42720]
Length = 550
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 94/190 (49%), Gaps = 12/190 (6%)
Query: 135 VCETGKIYSLGKTRTNKGLKLRHGNSE-RVFRLEFISNQEFTESEFIRWKDQCMTEGVAL 193
V K Y LG T+T+ L + S+ + F L S+ + T EF R+ + +
Sbjct: 287 VSHPHKQYRLGDTKTDFYLVVSQNKSQTKEFPLSVFSDADITPEEFERYVQELNKTNEDV 346
Query: 194 PTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKP--TPYNYAMKKTQLMKERDMAQ 251
P D++ K++++ M +D++ +V +K++ + + ++ +K+++ E +A+
Sbjct: 347 PYVDDINEKAEQLHQLMNSGLSNKDIDDMVTKKQKMQGGISSFDAVYQKSRVRDELKVAK 406
Query: 252 SKGD---DEEASILQRKIDDLEERANELDKARTS--TISSISYINNRNRRKNVEEAEKAI 306
+GD +E S RK++D+ + D RTS +++ +S +N RNR+ N KA
Sbjct: 407 QEGDVARVKELSDRLRKLEDILYK----DTERTSAGSMNDMSKVNERNRKLNQTNIRKAE 462
Query: 307 MVSCCCCCSG 316
+ S +G
Sbjct: 463 LKSSHLRKTG 472
>gi|358395799|gb|EHK45186.1| hypothetical protein TRIATDRAFT_163887, partial [Trichoderma
atroviride IMI 206040]
Length = 603
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 87/190 (45%), Gaps = 27/190 (14%)
Query: 138 TGKIYSL----GKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVAL 193
T + Y+L G T++ +K HG + + F S TESE R+K C +GV L
Sbjct: 312 TSRPYALNGPQGSFVTDQYVKAAHGKAIKEFPFIAASGGSITESELNRYKVTCHNDGVTL 371
Query: 194 PTKDEVERKSKEIQNGMMYQWKEEDVEQIVRE----KERFKPTPYNYAMKKTQLMKERDM 249
PTK + K +I + ++W E+++ V + ++RF P+ + L++E
Sbjct: 372 PTKAFLMDKIDDINGLINHKWTNEEIKARVAKRNEFRKRFDPSER---QRVANLLEE--- 425
Query: 250 AQSKGDDEEASILQRKIDDL------------EERANELDKARTSTISSISYINNRNRRK 297
A +GDD++ LQ ++D L + E KA +S ++ N NRR
Sbjct: 426 AIQEGDDQKVEELQEELDKLGRERLAFKTSLGASKNPEATKA-SSEQDRLAERNRENRRL 484
Query: 298 NVEEAEKAIM 307
N E KA +
Sbjct: 485 NQEAVRKAQL 494
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 316 GFSYRSVKSSASRKVIEYIETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNN 375
G ++RS + +ASR++ + + R+RL R + ++ P F + GC++RI +G +
Sbjct: 237 GQTHRSPEKAASREL--PLPELRDFERVRLGRNEFAQVCSTPGFEAAITGCYIRIALGAH 294
Query: 376 --TGIPLYRVS 384
TG+ YR++
Sbjct: 295 PETGVEQYRLA 305
>gi|347840505|emb|CCD55077.1| similar to RNA polymerase II transcription elongation factor Rtf1p
[Botryotinia fuckeliana]
Length = 610
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 78/159 (49%), Gaps = 13/159 (8%)
Query: 157 HGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEVERKSKEIQNGMMYQWKE 216
HG SER + S+ FTE+E+ R+K C+ +G+ +PTK ++ +K EI + W E
Sbjct: 344 HGKSERSWPFIACSDSRFTEAEWQRYKQNCIADGIPVPTKPKLMQKCAEINALVNRPWTE 403
Query: 217 EDVE------QIVREK----ERFKPTPYNYAMKKTQLMKERDMAQSKGDDEEASILQRKI 266
E+++ ++ EK ER + N A+K+ + + ++ + + EA +
Sbjct: 404 EELQTKLKKSSVLTEKWNTSERAR---LNNAIKEQKSLGNTELEEKYRSELEALESAKLA 460
Query: 267 DDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKA 305
+ + K S ++ +N NRRKN+EE +A
Sbjct: 461 YGTTLKPTQKKKTVHSQQDRLAELNRTNRRKNIEEVRQA 499
>gi|367013860|ref|XP_003681430.1| hypothetical protein TDEL_0D06350 [Torulaspora delbrueckii]
gi|359749090|emb|CCE92219.1| hypothetical protein TDEL_0D06350 [Torulaspora delbrueckii]
Length = 565
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 84/171 (49%), Gaps = 5/171 (2%)
Query: 140 KIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEV 199
K Y++G TN+ + G +VF++ F S+ FT+SE+ R+ + P+ +
Sbjct: 307 KPYNMGNFFTNQYFGVTQGKDRKVFQMNFFSDGNFTQSEYDRYLRALDGVHITKPSMYSL 366
Query: 200 ERKSKEIQNGMMYQWKEEDVEQIVREKERF--KPTPYNYAMKKTQLMKERDMAQSKGDDE 257
+ K+KE+ + ++ + IVR + F K + N ++KT L ++ AQ G+D
Sbjct: 367 DNKAKEMNAFVSQPLTDKLTDDIVRNRMLFNKKLSGSNAVLEKTVLKEKLRYAQETGNDR 426
Query: 258 EASILQRKIDDLEERANELDKAR---TSTISSISYINNRNRRKNVEEAEKA 305
+ + ++ +L +R + +K S I + + ++NR+ N++ A
Sbjct: 427 DIAKYSSQLRNLVKRMSAYEKHHETDQSGIKKLGALTSKNRKVNMDRIRNA 477
>gi|390605144|gb|EIN14535.1| plus-3-domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 577
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 90/215 (41%), Gaps = 54/215 (25%)
Query: 140 KIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEV 199
K Y + N+ ++L+HG S + + ++ +SN ++ + EF R C EGV LP K ++
Sbjct: 276 KPYRVNDVPVNQSIELKHGKSTKTWTMDKVSNADWNDREFDRLVAVCKAEGVKLPRKRDL 335
Query: 200 ERKSKEIQNGMMYQWKEEDVEQIVREKERFK----------------------------- 230
E+K + M + E+ V + FK
Sbjct: 336 EKK-----HAQMKKLVEQPVTEARSAASAFKSYADLHSQLDLAKELAKRRALQALIGGGA 390
Query: 231 PTP-YNYAMKKTQLMKERDMAQSKGDDEEASILQRKIDDLEERAN--------------- 274
PT + A++K++L R +A ++ D +E + ++ ++ L ++N
Sbjct: 391 PTSGTSLALEKSRLNAARTVAYNRQDWDECASIEAELSALNAQSNPSPTKAKSGDPAVDG 450
Query: 275 ----ELDKARTSTISSISYINNRNRRKNVEEAEKA 305
+ A+ S ++ +N RNRR N+E KA
Sbjct: 451 GANGNPEAAKESERDKLARVNERNRRANMEAVRKA 485
>gi|312074612|ref|XP_003140048.1| hypothetical protein LOAG_04461 [Loa loa]
Length = 211
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%)
Query: 250 AQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRR 296
A+ G+ EE ILQ +IDDLE RA EL++ R+ +I IS+IN RNR+
Sbjct: 4 AEQYGNVEEVQILQLQIDDLEARAAELERRRSQSIRGISWINQRNRQ 50
>gi|444319893|ref|XP_004180603.1| hypothetical protein TBLA_0E00220 [Tetrapisispora blattae CBS 6284]
gi|387513646|emb|CCH61084.1| hypothetical protein TBLA_0E00220 [Tetrapisispora blattae CBS 6284]
Length = 570
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 84/166 (50%), Gaps = 5/166 (3%)
Query: 142 YSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEVER 201
+ +GK TN+ + GN+ +V+ +++ S+ T +EF R+ + + P+ +
Sbjct: 314 HDMGKFFTNQCFGVTQGNNRKVYSMKYFSDSPITHAEFDRYIRTLEHDHITRPSVYAINN 373
Query: 202 KSKEIQNGMMYQWKEEDVEQIVREKERF--KPTPYNYAMKKTQLMKERDMAQSKGDDEEA 259
K KEI ++ +QIVR + RF K + N ++KT L + A+ G++ +
Sbjct: 374 KFKEITAFTTEPLTDKLTDQIVRNRMRFNKKLSGTNAVLEKTVLRGKLQFAKETGNERDV 433
Query: 260 SILQRKIDDLEERANELDKARTSTISS---ISYINNRNRRKNVEEA 302
+ ++ +LE+R + +K + + + + +RNR+ N+++A
Sbjct: 434 TKYSAQLRNLEKRLSLYEKHHENDQTGAKKLGQLTSRNRKLNMDKA 479
>gi|380482761|emb|CCF41037.1| plus-3 domain-containing protein [Colletotrichum higginsianum]
Length = 607
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 94/181 (51%), Gaps = 24/181 (13%)
Query: 139 GKIYSL----GKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALP 194
GK Y++ G T++ + HG +ER F F+S++ F+E E+ R++ +EG++LP
Sbjct: 318 GKPYAMTGPGGSFVTDQYVLAAHGKAERPFPFIFLSDRPFSEREYNRYEKVIQSEGLSLP 377
Query: 195 TKDEVERKSKEIQNGMMYQWKEEDVEQIVREK----ERFKPTPYNYAMKKTQLMKERDMA 250
K + K ++I + + ++++ ++ K ++F P + +L +E ++A
Sbjct: 378 KKQVLLDKIEDINALIAHHLTTTEIDERIQRKNALRKKFDPK------LRERLAQEIEVA 431
Query: 251 QSKGDDEEASILQRKIDDLEERANEL--------DKARTSTISSISYINNRNRRKNVEEA 302
+ +G+ +A LQ ++DDL + N L ++ ST S + N NR++ +E A
Sbjct: 432 RLRGNAAKAEELQEQLDDL--KTNVLAFKTSLSDSSSKPSTTSQQDRLANINRQRRLENA 489
Query: 303 E 303
E
Sbjct: 490 E 490
>gi|388580488|gb|EIM20802.1| plus-3-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 464
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 65/129 (50%), Gaps = 2/129 (1%)
Query: 145 GKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEVERKSK 204
G T TN+ L L+ G + + ++ +SN T+ EF R+ E LPT+ +E
Sbjct: 264 GNTMTNQQLVLKQGRASKPCNMDKVSNSRCTDREFDRFVAHAKYEKARLPTRKTIEMVRT 323
Query: 205 EIQNGMMYQWKEEDVEQIVREKERF--KPTPYNYAMKKTQLMKERDMAQSKGDDEEASIL 262
+I+ W E D+ +++K N A++K +L + +A+++ D +EA L
Sbjct: 324 QIEETRKRPWSEADINFKLQKKAAVMGGTLKKNVALEKAELQQRLQLARARRDVQEAEYL 383
Query: 263 QRKIDDLEE 271
+K++ +EE
Sbjct: 384 FQKLEAMEE 392
>gi|357510279|ref|XP_003625428.1| RNA polymerase-associated protein RTF1-like protein [Medicago
truncatula]
gi|355500443|gb|AES81646.1| RNA polymerase-associated protein RTF1-like protein [Medicago
truncatula]
Length = 624
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 85/189 (44%), Gaps = 8/189 (4%)
Query: 135 VCETGKIYSLGKTRTNKGLKLRHGNSERVFR--LEFISNQEFTESEFIRW-KDQCMTEGV 191
+ ++Y L T K L + GN R + +S+ E EF +W K+ + G
Sbjct: 299 ASDPDRLYKLDNKTTYKYLNVVWGNETSAARWQMAMVSDSPPLEEEFKQWVKEVERSGGR 358
Query: 192 ALPTKDEVERKSKEIQ-NGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERDMA 250
L D VE+K ++ N +Y V+Q++ EK+ P N A +K +L +E ++A
Sbjct: 359 MLKRLDVVEKKQAMLKINNFVYSAAT--VKQMLEEKKSISRRPLNVAAEKDRLKRELEIA 416
Query: 251 QSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKAIMVSC 310
+SK D +Q K+ +LEE +K + +S +N +NR +N + A V+
Sbjct: 417 ESKNDAAGVEKIQTKLQELEESRKSREK--DAKALRLSEMNRKNRVENFKNASDLKPVNK 474
Query: 311 CCCCSGFSY 319
Y
Sbjct: 475 ALKAGEAGY 483
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 338 EELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRV 383
E++ I + R K+ K P F ++++GCFVR+GIG + P+YR+
Sbjct: 246 EDIQDITIPRSKLTKWFMEPFFEELIVGCFVRVGIGRSKTGPIYRL 291
>gi|71022655|ref|XP_761557.1| hypothetical protein UM05410.1 [Ustilago maydis 521]
gi|46101426|gb|EAK86659.1| hypothetical protein UM05410.1 [Ustilago maydis 521]
Length = 598
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 78/186 (41%), Gaps = 26/186 (13%)
Query: 64 RDMAQSKIGESQP-FRDGNLSSLPRAGIEPEIVEVVYKKDLISSAMFYGSVCDLTSWHIF 122
+D+A ++ P D N + + R IE + ++ L S + + SW
Sbjct: 282 KDLASARDSSDPPSLSDLNAARVTRDQIESRLYAPRWRDVLTGSFIRF-------SWGTR 334
Query: 123 SSHPQ--------EIGEISGVCET-GKIYSLGKTRTNKG----LKLRHGNSERVFRLEFI 169
S Q I ++S V E GK Y L R+ K L H +E R++ +
Sbjct: 335 PSDSQPGRTETVYRIHQVSDVIEKPGKFYDLSADRSGKWCNVYLVFEHAGNEHEARIDML 394
Query: 170 SNQEFTESEFIRW-----KDQCMTEGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVR 224
S EFTESE RW + G LP K V RK+ E++ E+D+ +++
Sbjct: 395 SRGEFTESERERWIAFVKSSKGSAGGGKLPKKGAVSRKADELEKFFTSPLTEQDIGKMLE 454
Query: 225 EKERFK 230
K++ +
Sbjct: 455 TKKKLR 460
>gi|449462844|ref|XP_004149150.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Cucumis
sativus]
gi|449517636|ref|XP_004165851.1| PREDICTED: RNA polymerase-associated protein RTF1 homolog [Cucumis
sativus]
Length = 660
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 82/170 (48%), Gaps = 4/170 (2%)
Query: 135 VCETGKIYSLGKTRTNKGLKLRHGNSERVFR--LEFISNQEFTESEFIRWKDQCMTEGVA 192
E + Y L T+K L + GN R + +S+ E E+ +W + G
Sbjct: 328 ATEPDRQYKLENKITHKYLNVIWGNEASAARWQMAMVSDSAPLEDEYKQWVKEVERTGGR 387
Query: 193 LPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERDMAQS 252
+ +K ++ K + IQ + + V+Q++++K+ P N A +K +L +E D+A S
Sbjct: 388 MLSKQDILEKKEAIQKVNNFVYSAATVKQMLQDKKSASARPLNIAAEKDRLRREMDVAVS 447
Query: 253 KGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEA 302
K D+ E ++ ++ LE A+ + + + ++ +N +NR +N + A
Sbjct: 448 KNDEAEVERIKTRLQQLE--ASRRLQMKDAKAIRLAEMNRKNRVENFKNA 495
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 32/48 (66%)
Query: 336 TKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRV 383
T E++ + + R K+ K + P F ++++GCFVR+GIG + P+YR+
Sbjct: 273 TFEDIKEVTIRRSKLAKWLMEPFFEELIVGCFVRVGIGRSRSGPIYRL 320
>gi|326470400|gb|EGD94409.1| hypothetical protein TESG_01927 [Trichophyton tonsurans CBS 112818]
Length = 638
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 41/70 (58%)
Query: 155 LRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEVERKSKEIQNGMMYQW 214
L HG +E+ F S FTE+EF R++ +G+ +PTK V++K +I + + +
Sbjct: 361 LAHGKAEKEFPFIACSESPFTEAEFNRYRKTMAVDGLKMPTKSAVDKKVADINRLLAHDF 420
Query: 215 KEEDVEQIVR 224
+E++E+ +R
Sbjct: 421 TKEELEEKLR 430
>gi|302498409|ref|XP_003011202.1| hypothetical protein ARB_02482 [Arthroderma benhamiae CBS 112371]
gi|291174751|gb|EFE30562.1| hypothetical protein ARB_02482 [Arthroderma benhamiae CBS 112371]
Length = 637
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 41/70 (58%)
Query: 155 LRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEVERKSKEIQNGMMYQW 214
L HG +E+ F S FTE+EF R++ +G+ +PTK V++K +I + + +
Sbjct: 361 LAHGKAEKEFPFIACSESPFTEAEFNRYRKTMAVDGLKMPTKSAVDKKVADINRLLAHDF 420
Query: 215 KEEDVEQIVR 224
+E++E+ +R
Sbjct: 421 TKEELEEKLR 430
>gi|327306317|ref|XP_003237850.1| hypothetical protein TERG_02559 [Trichophyton rubrum CBS 118892]
gi|326460848|gb|EGD86301.1| hypothetical protein TERG_02559 [Trichophyton rubrum CBS 118892]
Length = 637
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 41/70 (58%)
Query: 155 LRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEVERKSKEIQNGMMYQW 214
L HG +E+ F S FTE+EF R++ +G+ +PTK V++K +I + + +
Sbjct: 361 LAHGKAEKEFPFIACSESPFTEAEFNRYRKTMAVDGLKMPTKSAVDKKVADINRLLAHDF 420
Query: 215 KEEDVEQIVR 224
+E++E+ +R
Sbjct: 421 TKEELEEKLR 430
>gi|353238297|emb|CCA70248.1| hypothetical protein PIIN_04187 [Piriformospora indica DSM 11827]
Length = 523
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 75/164 (45%), Gaps = 10/164 (6%)
Query: 135 VCETGKI-------YSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCM 187
+CE I Y++ N+ L+L S R+F ++ +SN FTE EF R C
Sbjct: 254 ICEIKSIGSRTVLPYTVENVTMNQQLELAFAKSTRLFNMDKVSNSAFTEREFDRLVATCK 313
Query: 188 TEGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMK---KTQLM 244
E LP +++ K + ++ E DV ++ + P +++ + +++
Sbjct: 314 QERCPLPKPSQIQEKRQGMKACEARNLTEADVAAMIARRRTINPNEVSFSQRIAEGSRIR 373
Query: 245 KERDMAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSIS 288
+E + A ++ D+ E + L+ ++D + E D A + + I+
Sbjct: 374 QELNAALARSDNAEVTRLRAELDAYNAKYGENDSAYSGSEHEIA 417
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%)
Query: 336 TKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
T ++L R++L+R ++ K P F + V G +VR IG+N G +YR+ E
Sbjct: 207 TVQDLGRLQLTRTQLAKEYMKPWFEEYVTGAWVRYLIGSNEGKAVYRICE 256
>gi|366993385|ref|XP_003676457.1| hypothetical protein NCAS_0E00260 [Naumovozyma castellii CBS 4309]
gi|342302324|emb|CCC70096.1| hypothetical protein NCAS_0E00260 [Naumovozyma castellii CBS 4309]
Length = 558
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 89/169 (52%), Gaps = 11/169 (6%)
Query: 140 KIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEV 199
K Y +G+ TN+ + G++ +VF++ F S+ FT EF R+ T + P+ +
Sbjct: 300 KPYRMGEFFTNQYFGVTQGSNRKVFQMNFFSDGLFTPDEFERYVRSLDTSHITKPSIYTL 359
Query: 200 ERKSKEIQNGMMYQWKEEDVEQIVREKERF--KPTPYNYAMKKTQLMKERDMAQSKGDDE 257
+ K+KEIQ+ + E+ ++ IVR + F K + N ++KT L + AQ ++
Sbjct: 360 KNKAKEIQSFISEPLTEQLMDTIVRNRMLFNKKLSGTNAVLEKTVLRDKLRYAQENNNER 419
Query: 258 EASILQRKIDDLE------ERANELDKARTSTISSISYINNRNRRKNVE 300
+ + ++ +LE E+ +E D+ ++ + +++ ++NR+ N++
Sbjct: 420 DVAKYSSQLRNLEKRLSVYEKHHENDQVGSNKLGALT---SKNRKVNMD 465
>gi|154289204|ref|XP_001545258.1| hypothetical protein BC1G_16216 [Botryotinia fuckeliana B05.10]
Length = 507
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 157 HGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEVERKSKEIQNGMMYQWKE 216
HG SER + S+ FTE+E+ R+K C+ +G+ +PTK ++ +K EI + W E
Sbjct: 302 HGKSERSWPFIACSDSRFTEAEWQRYKQNCIADGIPVPTKPKLMQKCAEINALVNRPWTE 361
Query: 217 EDVE 220
E+++
Sbjct: 362 EELQ 365
>gi|322701164|gb|EFY92915.1| RNA polymerase II transcription elongation factor Rtf1p, putative
[Metarhizium acridum CQMa 102]
Length = 590
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 68/130 (52%), Gaps = 14/130 (10%)
Query: 138 TGKIYSL----GKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVAL 193
T + Y+L G T++ +K HG + + F S+ +FT++E R++ C E V L
Sbjct: 298 TSRPYALTGPQGPFVTDQYVKAAHGKAVKEFPFIAASSGKFTDNELNRYQVTCANENVKL 357
Query: 194 PTKDEVERKSKEIQNGMMYQWKEEDVEQIVRE----KERFKPTPYNYAMKKTQLMKERDM 249
PTK + K EI N + ++W E+++ + + K RF PT ++ ++ K D
Sbjct: 358 PTKSYLADKIDEINNLINHKWTSEEIKARLAKRNELKRRFDPT------ERERVGKLLDE 411
Query: 250 AQSKGDDEEA 259
A ++GD+ +A
Sbjct: 412 AVARGDETKA 421
Score = 37.7 bits (86), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 339 ELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNN--TGIPLYRVS 384
+ R+RL R + ++ P F + GC++RI +G + TG+ YR++
Sbjct: 244 DFERVRLGRNEFAQVCFTPGFESAITGCYIRIALGPHPETGVEQYRMA 291
>gi|296804698|ref|XP_002843199.1| vegetative cell wall protein gp1 [Arthroderma otae CBS 113480]
gi|238845801|gb|EEQ35463.1| vegetative cell wall protein gp1 [Arthroderma otae CBS 113480]
Length = 635
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 78/164 (47%), Gaps = 13/164 (7%)
Query: 154 KLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEVERKSKEIQNGMMYQ 213
+L HG +E+ F S+ FTE EF R++ + E +PTK V K +I + +Q
Sbjct: 359 RLAHGKAEKDFPFIACSDSPFTEGEFNRYRQTMIVEDCKMPTKSMVSNKVADINRLLNHQ 418
Query: 214 WKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERDMAQSKGDDEEASI------LQRKID 267
+ +E++E EK R + T N + +++ ER ++ + +EA+I L R
Sbjct: 419 FTKEELE----EKLRRQGTNDNKQLIFSRIQLERRRNEAIANKDEAAIAECDAELARLTG 474
Query: 268 DLEERANELDKARTSTISS---ISYINNRNRRKNVEEAEKAIMV 308
L K R+S S ++ +N RN++ N E KA +
Sbjct: 475 PKLAFGTSLTKPRSSEKSQQERLAELNLRNQKLNTENVRKAQLA 518
>gi|388856575|emb|CCF49881.1| uncharacterized protein [Ustilago hordei]
Length = 601
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 5/107 (4%)
Query: 129 IGEISGVCET-GKIYSLGKTRT----NKGLKLRHGNSERVFRLEFISNQEFTESEFIRWK 183
I +++ V E GK Y+L + R+ N L H N ER +L +S +FTESE RW
Sbjct: 355 IHQVADVIENPGKFYNLSEDRSGRWCNVFLVFEHDNIERKAKLNLLSRGDFTESERDRWM 414
Query: 184 DQCMTEGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFK 230
+ +P K V RK+ E++ E D+++++ K+R +
Sbjct: 415 AWLKSSEQRVPKKGSVMRKADELEKFFTSPLTEADIKKMLDHKKRIR 461
>gi|254583221|ref|XP_002499342.1| ZYRO0E09526p [Zygosaccharomyces rouxii]
gi|238942916|emb|CAR31087.1| ZYRO0E09526p [Zygosaccharomyces rouxii]
Length = 560
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 84/174 (48%), Gaps = 5/174 (2%)
Query: 140 KIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEV 199
K Y++GK TN+ + G +VF++ + S+ T+ EF R+ + + P+ +
Sbjct: 302 KPYNMGKFITNQYFGVTQGKDRKVFQMRYFSDGAITQQEFERYMHALERDHITGPSVYSL 361
Query: 200 ERKSKEIQNGMMYQWKEEDVEQIVREKERF--KPTPYNYAMKKTQLMKERDMAQSKGDDE 257
E K+KEI + + E+ IVR + F K + N ++KT L ++ A ++
Sbjct: 362 ENKAKEINSFVSQPLTEQLTNDIVRNRMVFNKKLSGVNAVLEKTVLKEKLQYAMETKNER 421
Query: 258 EASILQRKIDDLEERANELDKARTST---ISSISYINNRNRRKNVEEAEKAIMV 308
+ + ++ E+R + +K + I+ ++ + +NRR N++ + A V
Sbjct: 422 DIAKYSSQLRSFEKRMSTYEKQHENDKVGINKLNALTTKNRRVNIDRLKNAEQV 475
>gi|45198784|ref|NP_985813.1| AFR266Wp [Ashbya gossypii ATCC 10895]
gi|44984813|gb|AAS53637.1| AFR266Wp [Ashbya gossypii ATCC 10895]
gi|374109044|gb|AEY97950.1| FAFR266Wp [Ashbya gossypii FDAG1]
Length = 562
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 84/166 (50%), Gaps = 5/166 (3%)
Query: 140 KIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEV 199
K Y++GK TN+ + G +VF++ F S+ + E+ R+ +Q + P+ +
Sbjct: 305 KPYNMGKFFTNQYFGVTQGKDRKVFQMNFFSDGPILQPEYERYLNQIAKHDINKPSLYTL 364
Query: 200 ERKSKEIQNGMMYQWKEEDVEQIVREKERF--KPTPYNYAMKKTQLMKERDMAQSKGDDE 257
K+K++ N + + +QIVR + +F K T N ++KT L + A+ +++
Sbjct: 365 NNKAKDLTNFVSQPMTPKLTDQIVRNRMQFNKKLTGTNAVLEKTVLRDKLQYARDTNNEK 424
Query: 258 EASILQRKIDDLEERANELDKAR---TSTISSISYINNRNRRKNVE 300
+ + ++ +LE+R + +K + I + + ++NR+ N++
Sbjct: 425 DIAKYSSQLKNLEKRMSSYEKHHENDQTGIRKLDALTSKNRKVNLD 470
>gi|425765536|gb|EKV04213.1| hypothetical protein PDIG_90770 [Penicillium digitatum PHI26]
gi|425783492|gb|EKV21340.1| hypothetical protein PDIP_07690 [Penicillium digitatum Pd1]
Length = 611
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 92/193 (47%), Gaps = 18/193 (9%)
Query: 129 IGEISGVCETGKIYSL----GKT-RTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWK 183
+G I+G+ + GK Y+L G++ T++ +KL HG + R F SN TE+E+ R+
Sbjct: 315 LGLITGISQ-GKPYALEGENGRSFVTDQYVKLAHGKAVRDFPFVTFSNSPLTEAEYRRYV 373
Query: 184 DQCMTEGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQL 243
E L TK +VE K +I + + + E++ + +R + F + + +L
Sbjct: 374 QTLTVEDCKLATKGKVESKVADINRLLNHTFTREELNEKLRRQGAFDQK--KNVLNRLEL 431
Query: 244 MKERDMAQSKGDDEEASILQRKIDDLEERA---------NELDKARTSTISSISYINNRN 294
+ + A+ G+ EEA ++ ++ + E+D+ S + IN RN
Sbjct: 432 ERNLEYAKVNGNMEEAEKIEAELQKIVNPTLSWGTSLVKKEIDRG-PSEAERVHQINIRN 490
Query: 295 RRKNVEEAEKAIM 307
++ N+E +A +
Sbjct: 491 QKLNIENVRRAQL 503
>gi|440493051|gb|ELQ75561.1| Paf1/RNA polymerase II complex, RTF1 component (involved in
regulation of TATA box-binding protein)
[Trachipleistophora hominis]
Length = 303
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 78/163 (47%), Gaps = 16/163 (9%)
Query: 148 RTNKGLKLRHGNSER-VFRLEFISNQEFTESEFIRWK----DQCMTEGVALPTKDEVERK 202
RTNK + + G+ R + FISN + +E+ +K D C+ V +K
Sbjct: 137 RTNKNICIVRGSGARECIPMSFISNSRPSFAEYDHFKMSYPDLCVAALV---------KK 187
Query: 203 SKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERDMAQSKGDDEEASIL 262
+ +N M + ++ + E+ +F M+K +L++ER+ A GD E+ +
Sbjct: 188 AHAFKNAMTREMSADERARAQEERSKFYRDKRKNLMEKIRLIREREDAFKNGDAEKVRAV 247
Query: 263 QRKIDDLEERANELDKARTSTISSISYINNRNRRKNVEEAEKA 305
Q++ID+++E+ + D A IN +NRR N E+ +A
Sbjct: 248 QKRIDEIDEK--DKDPAEEKEKEIWDRINAKNRRINYEKGVRA 288
>gi|356517883|ref|XP_003527615.1| PREDICTED: uncharacterized protein LOC100815079 [Glycine max]
Length = 1421
Score = 46.2 bits (108), Expect = 0.027, Method: Composition-based stats.
Identities = 26/106 (24%), Positives = 50/106 (47%)
Query: 131 EISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEG 190
++ G C+ + Y +GK T L++ + N + ++ ISNQEFTE E R +
Sbjct: 626 QVVGTCKAAEPYKVGKRMTEILLEILNLNKTEIVSIDIISNQEFTEDECKRLRQSIKCGL 685
Query: 191 VALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNY 236
+ T +++ K+ +Q + W E + ++ ++R NY
Sbjct: 686 INRLTVGDIQDKALVLQEARVKDWLETETVRLSHLRDRASEKGQNY 731
>gi|358368630|dbj|GAA85246.1| RNA polymerase II transcription elongation factor Rtf1 [Aspergillus
kawachii IFO 4308]
Length = 604
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 60/118 (50%), Gaps = 2/118 (1%)
Query: 149 TNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEVERKSKEIQN 208
TN+ L HG +ER F S+ FTE+EF R++ E + TK V K +I
Sbjct: 338 TNQYAVLAHGKAEREFPFVACSDSPFTEAEFNRYRQTMAVEDCKMATKSMVANKVTDINR 397
Query: 209 GMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERDMAQSKGDDEEASILQRKI 266
+ +++ E++ + +R++ T Y + K+ + K+ +A+ GDD E L+ ++
Sbjct: 398 LLNHKFTNEELNEKLRKQGSLD-TKYKF-FKRVDIEKQLKLAREAGDDAEMERLEAEL 453
>gi|323448143|gb|EGB04046.1| hypothetical protein AURANDRAFT_72613 [Aureococcus anophagefferens]
Length = 260
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 5/114 (4%)
Query: 73 ESQPFRDGNLSSL--PRAGIEPEIVEVVYKKDLISSAMFYGSVCDLTSWHIFSSHPQEIG 130
E P G + L PR+ +E + E ++K +I + G + H + + ++
Sbjct: 136 EDPPLSSGAIGKLRLPRSLLEKWVEEPFFEKAVIGCYVRLG-IGKAPGPHGEAQY--KVC 192
Query: 131 EISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKD 184
EI GV E Y G+ T K L LR G ++R++R+ ISN F +E W++
Sbjct: 193 EIIGVEEYKHSYPFGEFETKKALMLRIGRNQRLWRMNVISNHRFAAAEIDEWRN 246
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 25/38 (65%)
Query: 340 LNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTG 377
+ ++RL R +EK V P F + VIGC+VR+GIG G
Sbjct: 145 IGKLRLPRSLLEKWVEEPFFEKAVIGCYVRLGIGKAPG 182
>gi|400597175|gb|EJP64910.1| plus-3 domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 609
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 68/140 (48%), Gaps = 14/140 (10%)
Query: 138 TGKIYSL----GKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVAL 193
TG+ Y+L G T++ +K+ HG + + F S+ FT +E R++ C E V
Sbjct: 299 TGRPYALSGPNGTFVTDQYVKVAHGKAIKEFPFIAASSGRFTVNELNRYQVTCHNENVKT 358
Query: 194 PTKDEVERKSKEIQNGMMYQWKEEDVE-QIVREKE---RFKPTPYNYAMKKTQLMKERDM 249
P K + K +I N + + W E+++ ++ R E RF P + +L++E +
Sbjct: 359 PLKSVLNSKIDDINNLLTHNWTNEEIKARLARRNELRKRFDPAER---ARVARLLEEATV 415
Query: 250 AQSKGDDEEASILQRKIDDL 269
A GD E LQ ++D L
Sbjct: 416 A---GDTERMQELQDELDKL 432
>gi|322706863|gb|EFY98442.1| RNA polymerase II transcription elongation factor Rtf1p, putative
[Metarhizium anisopliae ARSEF 23]
Length = 590
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 53/103 (51%), Gaps = 8/103 (7%)
Query: 138 TGKIYSL----GKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVAL 193
T + Y+L G T++ +K HG + + F S+ +FTE+E R++ C E V L
Sbjct: 298 TSRPYALTGPQGPFVTDQYVKAAHGKAVKEFPFIAASSGKFTENELNRYQVTCTNENVKL 357
Query: 194 PTKDEVERKSKEIQNGMMYQWKEEDVEQIVRE----KERFKPT 232
PTK + K EI N + ++W E+++ + + K RF P
Sbjct: 358 PTKAYLADKIDEINNLINHKWTSEEIKARLAKRNELKRRFDPA 400
>gi|242039111|ref|XP_002466950.1| hypothetical protein SORBIDRAFT_01g017290 [Sorghum bicolor]
gi|241920804|gb|EER93948.1| hypothetical protein SORBIDRAFT_01g017290 [Sorghum bicolor]
Length = 1650
Score = 45.1 bits (105), Expect = 0.057, Method: Composition-based stats.
Identities = 51/207 (24%), Positives = 93/207 (44%), Gaps = 18/207 (8%)
Query: 81 NLSSLPRAGIEPEIVEVVYKKDLISSAMFYGSVCDLTSWHIFSSHPQEIGEISGVCETGK 140
NL L R+ +E I EV D I+ A + L + Q++ + V T K
Sbjct: 481 NLIYLRRSLMEDLIDEVTAFSDKIAGAFVRIRISGL-------GNKQDMYRLVKVLGTHK 533
Query: 141 I---YSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTK- 196
+ Y++GK T+ L++ + + + ++ ISNQ+FTE E R + Q M G+ K
Sbjct: 534 VAERYTVGKKTTDYALEISNLEKKEIITMDTISNQDFTEEECKRLR-QSMKFGLTARLKV 592
Query: 197 DEVERKSKEIQNGMMYQWKEEDVEQI------VREKERFKPTPYNYAMKKTQLMKERDMA 250
+V K+K Q+ W E + +++ E R K P++ ++K Q++ +
Sbjct: 593 GDVYEKAKIFQSLRFKDWLENEKQRLSHLRDRASETGRRKEYPFSQCVEKLQVLNTPEEK 652
Query: 251 QSKGDDEEASILQRKIDDLEERANELD 277
+ ++ + ++D E A E D
Sbjct: 653 ERMINEVPEVHVDPRMDPSYESAEEPD 679
>gi|449296475|gb|EMC92495.1| hypothetical protein BAUCODRAFT_293733 [Baudoinia compniacensis
UAMH 10762]
Length = 619
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 72/171 (42%), Gaps = 20/171 (11%)
Query: 157 HGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEVERKSKEIQNGMMYQWKE 216
HG +E+ + S+ FT+ E+ R+ D + + P K + + I + W +
Sbjct: 344 HGAAEKPWPFSACSDSHFTDQEYDRYIDTLKKDNIRTPLKKHLSARLDAIHGLLNMDWTD 403
Query: 217 EDVEQIVREKERF--KPTPYNYAMKKTQLMKERDM-AQSKGDDEEASILQRKIDDLEERA 273
E + Q + + K P N A+ K + +K+R + A+ GD EE + ++ LE
Sbjct: 404 ERITQKLANQRAMEKKLDPANAAVIKLEKIKQRRLKAEQDGDSEEVARCDAEVAALENAT 463
Query: 274 NEL-----------------DKARTSTISSISYINNRNRRKNVEEAEKAIM 307
+ + A S ++ IN +NR K EE KA++
Sbjct: 464 QSMTNGHGNANGTVKPSPKKNNAPMSQQDRLAQINMKNRSKTTEEVRKALI 514
>gi|255717581|ref|XP_002555071.1| KLTH0G00726p [Lachancea thermotolerans]
gi|238936455|emb|CAR24634.1| KLTH0G00726p [Lachancea thermotolerans CBS 6340]
Length = 561
Score = 44.7 bits (104), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 87/176 (49%), Gaps = 11/176 (6%)
Query: 140 KIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEV 199
K Y++GK TN+ + G + +VF++ F S+ T+ EF R+ T + P+ +
Sbjct: 303 KPYNMGKFFTNQYFGVTQGKNRKVFQMNFFSDGAITQPEFERYLRSLETSEINKPSLYII 362
Query: 200 ERKSKEIQNGMMYQWKEEDVEQIVREKERF--KPTPYNYAMKKTQLMKERDMAQSKGDDE 257
KS EI + + + +++VR + F K + N ++KT L + A+ G +
Sbjct: 363 NNKSNEINSFVSQPVTSKLTDELVRNRMIFNKKLSGTNAVLEKTILKDKLQYAKESGSER 422
Query: 258 EASILQRKIDDLE------ERANELDKARTSTISSISYINNR---NRRKNVEEAEK 304
+ + ++ +LE E+ +E D+A + + +++ N R ++ KNVE +K
Sbjct: 423 DVAKYSSQLRNLEKRLSSYEKHHENDQAGSKKLGALTSKNRRVNLDKGKNVEVTKK 478
>gi|396498493|ref|XP_003845250.1| hypothetical protein LEMA_P005580.1 [Leptosphaeria maculans JN3]
gi|312221831|emb|CBY01771.1| hypothetical protein LEMA_P005580.1 [Leptosphaeria maculans JN3]
Length = 496
Score = 44.3 bits (103), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 23/106 (21%), Positives = 57/106 (53%), Gaps = 6/106 (5%)
Query: 129 IGEISGVCETGKIYSL-----GKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWK 183
+ +I G TGK Y K T++ + +HG ++ ++ +F+SNQ FTE++ ++
Sbjct: 254 MAQIKGFT-TGKPYVFEGKGGKKVATDQYVIAQHGAVKKDYQFQFLSNQRFTETDLETYR 312
Query: 184 DQCMTEGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERF 229
+ +PT+ ++RK +++++ + W + D+ + + +++
Sbjct: 313 QSLVETNAKIPTQSFLQRKYEDLKSLQNHHWTDADISARIAKSKKY 358
>gi|430813216|emb|CCJ29415.1| unnamed protein product [Pneumocystis jirovecii]
Length = 204
Score = 44.3 bits (103), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 56/104 (53%), Gaps = 17/104 (16%)
Query: 211 MYQWKEEDVE--QIVREKERFKPTPYNYAMKKTQLMKERDMAQSKGDDEEASILQRKIDD 268
M Q K D+E ++ ++ + P N A++KTQL K RD+A + GD++EA L K++
Sbjct: 1 MTQHKLTDLEISDMIARRKALQKIPGNIAIEKTQLKKIRDIAIAHGDEKEAKRLTEKLNT 60
Query: 269 LEERAN-------ELDKARTSTISSISYINNRNRRKNVEEAEKA 305
LEE + LDK ++ +N +NR+ N++ +A
Sbjct: 61 LEELSAGKRHVLIHLDK--------LAKLNEKNRKANLDTIRQA 96
>gi|363749821|ref|XP_003645128.1| hypothetical protein Ecym_2597 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888761|gb|AET38311.1| Hypothetical protein Ecym_2597 [Eremothecium cymbalariae
DBVPG#7215]
Length = 562
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 113/246 (45%), Gaps = 17/246 (6%)
Query: 140 KIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEV 199
K YS+GK TN+ + G +VF++ + S+ T+ EF R+ +Q + P+ +
Sbjct: 303 KPYSMGKFFTNQYFGVTQGKDRKVFQMNYFSDGPITQPEFERYLNQMAKYDMNKPSLYTL 362
Query: 200 ERKSKEIQNGMMYQWKEEDVEQIVREKERF--KPTPYNYAMKKTQLMKERDMAQSKGDDE 257
K+KE+ N + + +QIVR + F K T N ++K+ L + A+ ++
Sbjct: 363 NNKAKELFNFVSQPMTMKLTDQIVRNRMVFNKKLTGTNAVLEKSVLKDKLQYAKDTNNES 422
Query: 258 EASILQRKIDDLEERANELDKAR---TSTISSISYINNRNRRKNVEEAEKAIMV----SC 310
+ ++ +LE+R + +K + I + + ++NR+ N+++ A V S
Sbjct: 423 AVAKYAAQLKNLEKRMSSYEKHHENDQTGIRKLGALTSKNRKVNMDKIRLAENVRKEDSS 482
Query: 311 CCCCSGFSYRSVKSSASRKVIEYIETKEELNR--IRLSRFK---MEKLVHLPIFGQIVIG 365
+ +K +R I Y E ++E N + L++ K +K Q+++
Sbjct: 483 NVDAKSDPFSRLK---TRTKIYYQEIQQEENEKAMELAKQKHQEQDKETQENKERQLLLA 539
Query: 366 CFVRIG 371
F R+G
Sbjct: 540 KFRRLG 545
>gi|321259824|ref|XP_003194632.1| rtf1 protein [Cryptococcus gattii WM276]
gi|317461104|gb|ADV22845.1| rtf1 protein, putative [Cryptococcus gattii WM276]
Length = 532
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 67/132 (50%), Gaps = 9/132 (6%)
Query: 132 ISGVCETGKI------YSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQ 185
I+ V ++G+ Y + R + L +++G++ R+FR+ +SN ESEF R+
Sbjct: 276 IADVDDSGQFGSYSIEYQGRQIRETRALLVKYGSASRLFRMADVSNGVIEESEFQRFSMT 335
Query: 186 CMTEGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYA--MKKTQL 243
+GV P + +++K EI+ ++++ V + + + + +N A +K QL
Sbjct: 336 NQADGVKTPKRSFLKKKHDEIKALRERPMTSAEIDRRV-DSRKSQESSFNRASLLKIHQL 394
Query: 244 MKERDMAQSKGD 255
M RD+A + D
Sbjct: 395 MNTRDLALRRND 406
>gi|323337728|gb|EGA78972.1| Rtf1p [Saccharomyces cerevisiae Vin13]
Length = 490
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 85/174 (48%), Gaps = 5/174 (2%)
Query: 140 KIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEV 199
K Y++GK TN+ + G +VF++ + S+ F E E+ R+ + P+ +
Sbjct: 299 KPYNMGKFYTNQYFGVTQGKDRKVFQMNYFSDGLFAEDEYQRYLRALDNSQMIKPSLHSL 358
Query: 200 ERKSKEIQNGMMYQWKEEDVEQIVREKERF--KPTPYNYAMKKTQLMKERDMAQSKGDDE 257
K+KE+ + + ++ +++VR + +F K + N ++KT L ++ A+ +++
Sbjct: 359 SXKTKEVMDFVNTPLTDKTTDEVVRHRMQFNKKLSGTNAVLEKTVLREKLQYAKETNNEK 418
Query: 258 EASILQRKIDDLEERANELDKAR---TSTISSISYINNRNRRKNVEEAEKAIMV 308
+ + ++ + E+R + +K S I + + ++NR+ N+ A V
Sbjct: 419 DIAKYSAQLRNFEKRMSVYEKHHENDQSDIKKLGELTSKNRKLNMSNIRNAEHV 472
>gi|189182070|gb|ACD81811.1| IP21371p [Drosophila melanogaster]
Length = 155
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 33/52 (63%)
Query: 334 IETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNNTGIPLYRVSE 385
+ ++++L +RLSR ++ L+ P F Q V GCFVR+ + +P +R++E
Sbjct: 51 VTSRDQLELLRLSRHRIGLLLVRPAFEQAVTGCFVRVNVSGQGELPDHRIAE 102
>gi|365760866|gb|EHN02553.1| Rtf1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 363
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 75/150 (50%), Gaps = 2/150 (1%)
Query: 140 KIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEV 199
K YS+GK TN+ + G +VF++ + S+ F + E+ R+ + P+ +
Sbjct: 202 KPYSMGKFYTNQYFGVTQGKDRKVFQMNYFSDGSFADDEYRRYFKALDNSHMVKPSLHSL 261
Query: 200 ERKSKEIQNGMMYQWKEEDVEQIVREKERF--KPTPYNYAMKKTQLMKERDMAQSKGDDE 257
K+KE+ + + ++ +++VR + +F K + N ++KT L ++ A+ +++
Sbjct: 262 SNKTKEVMDFVNTPLTDKTTDEVVRHRMQFNKKLSGTNAVLEKTVLREKLQYAKETNNEK 321
Query: 258 EASILQRKIDDLEERANELDKARTSTISSI 287
+ + ++ + E+R + +K + S I
Sbjct: 322 DIAKYSAQLRNFEKRMSIYEKHHENDQSDI 351
>gi|115398640|ref|XP_001214909.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114191792|gb|EAU33492.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 607
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 64/123 (52%), Gaps = 6/123 (4%)
Query: 149 TNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEVERKSKEIQN 208
TN+ L HG +ER F S+ FTE+EF R++ E + TK + K +I
Sbjct: 340 TNQYAVLAHGKAEREFPFIACSDSPFTEAEFNRYRQTMAVEDCKIATKSVLAEKVADINR 399
Query: 209 GMMYQWKEEDVEQIVREKERFKPTPYNYAM--KKTQLMKERDMAQSKGDDEEASILQRKI 266
+ +++ +E++ + +R++ F AM K+ +L ++ +A++ G+D E L+ ++
Sbjct: 400 LLNHKFTKEELNEKLRKQGSFD----TKAMFFKRVELERQIKLAKAAGEDAEVEKLEEEL 455
Query: 267 DDL 269
L
Sbjct: 456 RSL 458
>gi|349577993|dbj|GAA23159.1| K7_Rtf1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 558
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 115/252 (45%), Gaps = 29/252 (11%)
Query: 140 KIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEV 199
K Y++GK TN+ + G +VF++ + S+ F E E+ R+ + P+ +
Sbjct: 299 KPYNMGKFYTNQYFGVTQGKDRKVFQMNYFSDGLFAEDEYQRYLRALDNSQMIKPSLHSL 358
Query: 200 ERKSKEIQNGMMYQWKEEDVEQIVREKERF--KPTPYNYAMKKTQLMKERDMAQSKGDDE 257
K+KE+ + + ++ +++VR + +F K + N ++KT L ++ A+ +++
Sbjct: 359 SNKTKEVMDFVNTPLTDKTTDEVVRHRMQFNKKLSGTNAVLEKTVLREKLQYAKETNNEK 418
Query: 258 EASILQRKIDDLEERANELDKAR---TSTISSISYINNRNRR------KNVEEAEKAIMV 308
+ + ++ + E+R + +K S I + + ++NR+ +N E +K
Sbjct: 419 DIAKYSAQLRNFEKRMSVYEKHHENDQSDIKKLGELTSKNRKLNMSNIRNAEHVKKEDSN 478
Query: 309 SCCCCCSGFS---------YRSVKSSASRKVIEYIETKEELNRIRLSRFKMEKLVHLPIF 359
+ FS Y+ ++ + K E I +E+L + ++ K EK
Sbjct: 479 NFDSKSDPFSRLKTRTKVYYQEIQKEENAKAKE-IAQQEKLQEDKDAKDKREK------- 530
Query: 360 GQIVIGCFVRIG 371
++++ F R+G
Sbjct: 531 -ELLVAQFRRLG 541
>gi|392299200|gb|EIW10294.1| Rtf1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 558
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 115/252 (45%), Gaps = 29/252 (11%)
Query: 140 KIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEV 199
K Y++GK TN+ + G +VF++ + S+ F E E+ R+ + P+ +
Sbjct: 299 KPYNMGKFYTNQYFGVTQGKDRKVFQMNYFSDGLFAEDEYQRYLRALDNSQMIKPSLHSL 358
Query: 200 ERKSKEIQNGMMYQWKEEDVEQIVREKERF--KPTPYNYAMKKTQLMKERDMAQSKGDDE 257
K+KE+ + + ++ +++VR + +F K + N ++KT L ++ A+ +++
Sbjct: 359 SNKTKEVMDFVNTPLTDKTTDEVVRHRMQFNKKLSGTNAVLEKTVLREKLQYAKETNNEK 418
Query: 258 EASILQRKIDDLEERANELDKAR---TSTISSISYINNRNRR------KNVEEAEKAIMV 308
+ + ++ + E+R + +K S I + + ++NR+ +N E +K
Sbjct: 419 DIAKYSAQLRNFEKRMSVYEKHHENDQSDIKKLGELTSKNRKLNMSNIRNAEHVKKEDSN 478
Query: 309 SCCCCCSGFS---------YRSVKSSASRKVIEYIETKEELNRIRLSRFKMEKLVHLPIF 359
+ FS Y+ ++ + K E I +E+L + ++ K EK
Sbjct: 479 NFDSKSDPFSRLKTRTKVYYQEIQKEENAKAKE-IAQQEKLQEDKDAKDKREK------- 530
Query: 360 GQIVIGCFVRIG 371
++++ F R+G
Sbjct: 531 -ELLVAQFRRLG 541
>gi|207345570|gb|EDZ72345.1| YGL244Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 558
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 115/252 (45%), Gaps = 29/252 (11%)
Query: 140 KIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEV 199
K Y++GK TN+ + G +VF++ + S+ F E E+ R+ + P+ +
Sbjct: 299 KPYNMGKFYTNQYFGVTQGKDRKVFQMNYFSDGLFAEDEYQRYLRALDNSQMIKPSLHSL 358
Query: 200 ERKSKEIQNGMMYQWKEEDVEQIVREKERF--KPTPYNYAMKKTQLMKERDMAQSKGDDE 257
K+KE+ + + ++ +++VR + +F K + N ++KT L ++ A+ +++
Sbjct: 359 SNKTKEVMDFVNTPLTDKTTDEVVRHRMQFNKKLSGTNAVLEKTVLREKLQYAKETNNEK 418
Query: 258 EASILQRKIDDLEERANELDKAR---TSTISSISYINNRNRR------KNVEEAEKAIMV 308
+ + ++ + E+R + +K S I + + ++NR+ +N E +K
Sbjct: 419 DIAKYSAQLRNFEKRMSVYEKHHENDQSDIKKLGELTSKNRKLNMSNIRNAEHVKKEDSN 478
Query: 309 SCCCCCSGFS---------YRSVKSSASRKVIEYIETKEELNRIRLSRFKMEKLVHLPIF 359
+ FS Y+ ++ + K E I +E+L + ++ K EK
Sbjct: 479 NFDSKSDPFSRLKTRTKVYYQEIQKEENAKAKE-IAQQEKLQEDKDAKDKREK------- 530
Query: 360 GQIVIGCFVRIG 371
++++ F R+G
Sbjct: 531 -ELLVAQFRRLG 541
>gi|343426663|emb|CBQ70192.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 593
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 5/107 (4%)
Query: 129 IGEISGVCE-TGKIYSLGKTRTNKG----LKLRHGNSERVFRLEFISNQEFTESEFIRWK 183
I ++S V E GK Y L R+ K L H E ++ +S EF ESE RW
Sbjct: 350 IHQVSEVVEKPGKFYDLSDDRSGKWCNVYLVFEHAGQEHDAKINMLSRGEFVESERERWL 409
Query: 184 DQCMTEGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFK 230
+P K V RK+ E+ E+D+ +I+ K+R +
Sbjct: 410 AMLHASKQRVPRKPVVARKADELDKFFTSPLTEQDIGKILDTKKRLR 456
>gi|365765720|gb|EHN07226.1| Rtf1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 558
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 115/252 (45%), Gaps = 29/252 (11%)
Query: 140 KIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEV 199
K Y++GK TN+ + G +VF++ + S+ F E E+ R+ + P+ +
Sbjct: 299 KPYNMGKFYTNQYFGVTQGKDRKVFQMNYFSDGLFAEDEYQRYLRALDNSQMIKPSLHSL 358
Query: 200 ERKSKEIQNGMMYQWKEEDVEQIVREKERF--KPTPYNYAMKKTQLMKERDMAQSKGDDE 257
K+KE+ + + ++ +++VR + +F K + N ++KT L ++ A+ +++
Sbjct: 359 SXKTKEVMDFVNTPLTDKTTDEVVRHRMQFNKKLSGTNAVLEKTVLREKLQYAKETNNEK 418
Query: 258 EASILQRKIDDLEERANELDKAR---TSTISSISYINNRNRR------KNVEEAEKAIMV 308
+ + ++ + E+R + +K S I + + ++NR+ +N E +K
Sbjct: 419 DIAKYSAQLRNFEKRMSVYEKHHENDQSDIKKLGELTSKNRKLNMSNIRNAEHVKKEDSN 478
Query: 309 SCCCCCSGFS---------YRSVKSSASRKVIEYIETKEELNRIRLSRFKMEKLVHLPIF 359
+ FS Y+ ++ + K E I +E+L + ++ K EK
Sbjct: 479 NFDSKSDPFSRLKTRTKVYYQEIQKEENAKAKE-IAQQEKLQEDKDAKDKREK------- 530
Query: 360 GQIVIGCFVRIG 371
++++ F R+G
Sbjct: 531 -ELLVAQFRRLG 541
>gi|6321193|ref|NP_011270.1| Rtf1p [Saccharomyces cerevisiae S288c]
gi|2506764|sp|P53064.2|RTF1_YEAST RecName: Full=RNA polymerase-associated protein RTF1
gi|1841839|gb|AAB47535.1| Rtf1p [Saccharomyces cerevisiae]
gi|1945310|emb|CAA96963.1| RTF1 [Saccharomyces cerevisiae]
gi|190407177|gb|EDV10444.1| protein RTF1 [Saccharomyces cerevisiae RM11-1a]
gi|259146273|emb|CAY79530.1| Rtf1p [Saccharomyces cerevisiae EC1118]
gi|285811975|tpg|DAA07875.1| TPA: Rtf1p [Saccharomyces cerevisiae S288c]
gi|323355157|gb|EGA86985.1| Rtf1p [Saccharomyces cerevisiae VL3]
Length = 558
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 115/252 (45%), Gaps = 29/252 (11%)
Query: 140 KIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEV 199
K Y++GK TN+ + G +VF++ + S+ F E E+ R+ + P+ +
Sbjct: 299 KPYNMGKFYTNQYFGVTQGKDRKVFQMNYFSDGLFAEDEYQRYLRALDNSQMIKPSLHSL 358
Query: 200 ERKSKEIQNGMMYQWKEEDVEQIVREKERF--KPTPYNYAMKKTQLMKERDMAQSKGDDE 257
K+KE+ + + ++ +++VR + +F K + N ++KT L ++ A+ +++
Sbjct: 359 SNKTKEVMDFVNTPLTDKTTDEVVRHRMQFNKKLSGTNAVLEKTVLREKLQYAKETNNEK 418
Query: 258 EASILQRKIDDLEERANELDKAR---TSTISSISYINNRNRR------KNVEEAEKAIMV 308
+ + ++ + E+R + +K S I + + ++NR+ +N E +K
Sbjct: 419 DIAKYSAQLRNFEKRMSVYEKHHENDQSDIKKLGELTSKNRKLNMSNIRNAEHVKKEDSN 478
Query: 309 SCCCCCSGFS---------YRSVKSSASRKVIEYIETKEELNRIRLSRFKMEKLVHLPIF 359
+ FS Y+ ++ + K E I +E+L + ++ K EK
Sbjct: 479 NFDSKSDPFSRLKTRTKVYYQEIQKEENAKAKE-IAQQEKLQEDKDAKDKREK------- 530
Query: 360 GQIVIGCFVRIG 371
++++ F R+G
Sbjct: 531 -ELLVAQFRRLG 541
>gi|256272508|gb|EEU07488.1| Rtf1p [Saccharomyces cerevisiae JAY291]
Length = 558
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 115/252 (45%), Gaps = 29/252 (11%)
Query: 140 KIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEV 199
K Y++GK TN+ + G +VF++ + S+ F E E+ R+ + P+ +
Sbjct: 299 KPYNMGKFYTNQYFGVTQGKDRKVFQMNYFSDGLFAEDEYQRYLRALDNSQMIKPSLHSL 358
Query: 200 ERKSKEIQNGMMYQWKEEDVEQIVREKERF--KPTPYNYAMKKTQLMKERDMAQSKGDDE 257
K+KE+ + + ++ +++VR + +F K + N ++KT L ++ A+ +++
Sbjct: 359 SNKTKEVMDFVNTPLTDKTTDEVVRHRMQFNKKLSGTNAVLEKTVLREKLQYAKETNNEK 418
Query: 258 EASILQRKIDDLEERANELDKAR---TSTISSISYINNRNRR------KNVEEAEKAIMV 308
+ + ++ + E+R + +K S I + + ++NR+ +N E +K
Sbjct: 419 DIAKYSAQLRNFEKRMSVYEKHHENDQSDIKKLGELTSKNRKLNMSNIRNAEHVKKEDSN 478
Query: 309 SCCCCCSGFS---------YRSVKSSASRKVIEYIETKEELNRIRLSRFKMEKLVHLPIF 359
+ FS Y+ ++ + K E I +E+L + ++ K EK
Sbjct: 479 NFDSKSDPFSRLKTRTKVYYQEIQKEENAKAKE-IAQQEKLQEDKDAKDKREK------- 530
Query: 360 GQIVIGCFVRIG 371
++++ F R+G
Sbjct: 531 -ELLVAQFRRLG 541
>gi|793868|emb|CAA89011.1| HRA458 [Saccharomyces cerevisiae]
gi|1589348|prf||2210407C HRA458 gene
Length = 458
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 115/252 (45%), Gaps = 29/252 (11%)
Query: 140 KIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEV 199
K Y++GK TN+ + G +VF++ + S+ F E E+ R+ + P+ +
Sbjct: 199 KPYNMGKFYTNQYFGVTQGKDRKVFQMNYFSDGLFAEDEYQRYLRALDNSQMIKPSLHSL 258
Query: 200 ERKSKEIQNGMMYQWKEEDVEQIVREKERF--KPTPYNYAMKKTQLMKERDMAQSKGDDE 257
K+KE+ + + ++ +++VR + +F K + N ++KT L ++ A+ +++
Sbjct: 259 SNKTKEVMDFVNTPLTDKTTDEVVRHRMQFNKKLSGTNAVLEKTVLREKLQYAKETNNEK 318
Query: 258 EASILQRKIDDLEERANELDKAR---TSTISSISYINNRNRR------KNVEEAEKAIMV 308
+ + ++ + E+R + +K S I + + ++NR+ +N E +K
Sbjct: 319 DIAKYSAQLRNFEKRMSVYEKHHENDQSDIKKLGELTSKNRKLNMSNIRNAEHVKKEDSN 378
Query: 309 SCCCCCSGFS---------YRSVKSSASRKVIEYIETKEELNRIRLSRFKMEKLVHLPIF 359
+ FS Y+ ++ + K E I +E+L + ++ K EK
Sbjct: 379 NFDSKSDPFSRLKTRTKVYYQEIQKEENAKAKE-IAQQEKLQEDKDAKDKREK------- 430
Query: 360 GQIVIGCFVRIG 371
++++ F R+G
Sbjct: 431 -ELLVAQFRRLG 441
>gi|350635679|gb|EHA24040.1| hypothetical protein ASPNIDRAFT_181543 [Aspergillus niger ATCC
1015]
Length = 606
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 59/118 (50%), Gaps = 2/118 (1%)
Query: 149 TNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEVERKSKEIQN 208
TN+ L HG +ER F S+ FTE+EF R++ E + TK V K +I
Sbjct: 339 TNQYAVLAHGKAEREFPFVACSDSPFTEAEFNRYRQTMAVEDCKMATKSMVASKVTDINR 398
Query: 209 GMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERDMAQSKGDDEEASILQRKI 266
+ +++ E++ + +R++ + K+ ++ K+ +A+ GDD E L+ ++
Sbjct: 399 LLNHKFTNEELNEKLRKQGSLDSKSKFF--KRVEVEKQLKLAREAGDDAEMERLEAEL 454
>gi|145237988|ref|XP_001391641.1| RNA polymerase II transcription elongation factor Rtf1p
[Aspergillus niger CBS 513.88]
gi|134076119|emb|CAK39477.1| unnamed protein product [Aspergillus niger]
Length = 606
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 59/118 (50%), Gaps = 2/118 (1%)
Query: 149 TNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEVERKSKEIQN 208
TN+ L HG +ER F S+ FTE+EF R++ E + TK V K +I
Sbjct: 339 TNQYAVLAHGKAEREFPFVACSDSPFTEAEFNRYRQTMAVEDCKMATKSMVASKVTDINR 398
Query: 209 GMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERDMAQSKGDDEEASILQRKI 266
+ +++ E++ + +R++ + K+ ++ K+ +A+ GDD E L+ ++
Sbjct: 399 LLNHKFTNEELNEKLRKQGSLDSKSKFF--KRVEVEKQLKLAREAGDDAEMERLEAEL 454
>gi|255731694|ref|XP_002550771.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240131780|gb|EER31339.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 549
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 85/185 (45%), Gaps = 14/185 (7%)
Query: 132 ISGV-CETGKIYSLGKTRTNKGLKLRHGNSE-RVFRLEFISNQEFTESEFIRWKDQCMTE 189
I GV + + Y LG+TR + L + ++ + F + F SN TE EF R+ +
Sbjct: 281 IIGVKLKKDRTYKLGRTRLDIYLTVSQNRTQTKDFPISFFSNSPITEEEFERYIRELTKT 340
Query: 190 GVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNY-----AMKKTQLM 244
+ D+V K +E+ ++D+ ++ K++ N +KT+LM
Sbjct: 341 DEVIDLLDDVNSKFEEVDAFFKKGLSDQDINAMIERKKQLNADKSNIRAVDAVTQKTRLM 400
Query: 245 KERDMAQSKGDDEEASILQRKIDDLEERANELDKARTSTISS----ISYINNRNRRKNVE 300
E +A+ +G+ + S + + DL++ + L+ + + S IS +N RNR+ N
Sbjct: 401 DELQIAKQQGNFNKVSKI---LGDLKKIESILEHEAATNVQSKESIISKVNERNRKLNST 457
Query: 301 EAEKA 305
KA
Sbjct: 458 NIRKA 462
>gi|405121164|gb|AFR95933.1| rtf1 protein [Cryptococcus neoformans var. grubii H99]
Length = 532
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 67/132 (50%), Gaps = 9/132 (6%)
Query: 132 ISGVCETGKI------YSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQ 185
I+ V E+G+ Y + R ++ L +++G++ R+FR+ +SN ESEF R+
Sbjct: 276 IADVDESGQFGSYSIEYQGRQIRESRALLVKYGSASRLFRMADVSNGVIEESEFQRFSMT 335
Query: 186 CMTEGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYA--MKKTQL 243
+GV P + +++K EI+ ++++ V + + + + + A +K QL
Sbjct: 336 NQADGVKAPKRSFLKKKHDEIKALRERPMTSAEIDRRV-DSRKSQESSFTRASLLKIHQL 394
Query: 244 MKERDMAQSKGD 255
M RD+A + D
Sbjct: 395 MNTRDLALRRND 406
>gi|330914400|ref|XP_003296624.1| hypothetical protein PTT_06767 [Pyrenophora teres f. teres 0-1]
gi|311331185|gb|EFQ95316.1| hypothetical protein PTT_06767 [Pyrenophora teres f. teres 0-1]
Length = 501
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Query: 149 TNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVA-LPTKDEVERKSKEIQ 207
T++ + ++HG+ ++ ++ +F+SNQ FTES+ ++ Q +TE A +PT+ ++RK +++
Sbjct: 280 TDQYVVVQHGSVKKDYQFQFMSNQRFTESDLDTYR-QSLTENNAKVPTQSFLKRKYDDLK 338
Query: 208 NGMMYQWKEEDV 219
+ W + D+
Sbjct: 339 ALQNHYWTDSDI 350
>gi|320591924|gb|EFX04363.1| RNA polymerase 2 transcription elongation factor [Grosmannia
clavigera kw1407]
Length = 661
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 84/175 (48%), Gaps = 18/175 (10%)
Query: 149 TNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEVERKSKEIQN 208
T++ ++ HG ++R + S+ FTESE+ R++ C + V++P K + K+ +I
Sbjct: 369 TDQYVQAAHGKAQREWPFLACSDGPFTESEWTRYQKICHVDNVSIPKKGILLNKADDINK 428
Query: 209 GMMYQWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERDMAQSKGDDEEASILQRKIDD 268
+ W E+++ + V+ ++ K +N +++ +L A++ G+ A LQ ++
Sbjct: 429 LINRSWTEDELTEKVQRQQALK-NRFN-GVERMKLEYGIKDAKAHGNFVRAEQLQEELQH 486
Query: 269 LE--------------ERANELDKART--STISSISYINNRNRRKNVEEAEKAIM 307
LE + +N D+ S ++ +N NRR+N E KA +
Sbjct: 487 LETPRLAFKTSLTQVGQASNSSDQGSGGLSQQERLAQLNAENRRRNAEAVRKAQL 541
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Query: 329 KVIEYIETKEELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNN--TGIPLYRVS 384
K I+ +E ++ + R+RLSR + ++ P F + G FVRI IG + T P+YR++
Sbjct: 290 KAIQTVELRD-IERVRLSRTRFSQVCFYPGFNTAISGTFVRISIGPDPETREPVYRMA 346
>gi|151943575|gb|EDN61885.1| restores tbp function [Saccharomyces cerevisiae YJM789]
Length = 558
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 115/252 (45%), Gaps = 29/252 (11%)
Query: 140 KIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEV 199
K Y++GK TN+ + G +VF++ + S+ F E E+ R+ + P+ +
Sbjct: 299 KPYNMGKFYTNQYFGVTQGKDRKVFQMNYFSDGLFAEDEYQRYLRALDNSQMIKPSLYSL 358
Query: 200 ERKSKEIQNGMMYQWKEEDVEQIVREKERF--KPTPYNYAMKKTQLMKERDMAQSKGDDE 257
K+KE+ + + ++ +++VR + +F K + N ++KT L ++ A+ +++
Sbjct: 359 SNKTKEVMDFVNTPLTDKTTDEVVRHRMQFNKKLSGTNAVLEKTVLREKLQYAKETNNEK 418
Query: 258 EASILQRKIDDLEERANELDKAR---TSTISSISYINNRNRR------KNVEEAEKAIMV 308
+ + ++ + E+R + +K S I + + ++NR+ +N E +K
Sbjct: 419 DIAKYSAQLRNFEKRMSVYEKHHENDQSDIKKLGELTSKNRKLNMSNIRNAEHVKKEDSN 478
Query: 309 SCCCCCSGFS---------YRSVKSSASRKVIEYIETKEELNRIRLSRFKMEKLVHLPIF 359
+ FS Y+ ++ + K E I +E+L + ++ K EK
Sbjct: 479 NFDSKSDPFSRLKTRTKVYYQEIQKEENAKAKE-IAQQEKLQEDKDAKDKREK------- 530
Query: 360 GQIVIGCFVRIG 371
++++ F R+G
Sbjct: 531 -ELLVAQFRRLG 541
>gi|449016295|dbj|BAM79697.1| hypothetical protein CYME_CMG202C [Cyanidioschyzon merolae strain
10D]
Length = 746
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 78/175 (44%), Gaps = 21/175 (12%)
Query: 117 TSWHIFSSHPQEI-----GEISGVCETGKIYSLGKTRTNKG------------LKLRHGN 159
S + SS PQ++ +S + + ++Y + T+ +G ++
Sbjct: 382 ASANATSSTPQQLQQYVLARVSAILKAPRLYPVPSTQVVEGGRPAPPFKVGFRIQAELCG 441
Query: 160 SERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEVERKSKE---IQNGMMYQWKE 216
+R F ++ +S +E E++ ++ + + + LP++DEVE E G + E
Sbjct: 442 RQRRFSVDQLSRHAPSELEWLHYEKRHQEQRLPLPSRDEVEALRAEKLAFMRGEIPATPE 501
Query: 217 EDVEQIVREKERFKPTPYNYAMKKTQLMKERDMAQSKGDDEEASILQRKIDDLEE 271
E + E ER P NYA + TQ+ + AQ GD E+ + L +++ L E
Sbjct: 502 E-IADFQAEFERLHPEAVNYARRITQVRAQLAHAQEAGDMEKQNALAAELERLAE 555
>gi|403331412|gb|EJY64651.1| hypothetical protein OXYTRI_15313 [Oxytricha trifallax]
Length = 626
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 7/99 (7%)
Query: 129 IGEISGVCET-GKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEF---IRWKD 184
+ EI V E G Y LGK +T+ L LR N+ R F+L +SN + E EF ++ +
Sbjct: 272 LAEIVEVKENPGNEYELGKFKTSLQLGLRFSNTVRFFKLILVSNADPNEDEFREMLKVRQ 331
Query: 185 QCMTEGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIV 223
+C + + + ++V+ K+KEI+ K E+VE +V
Sbjct: 332 ECKHKPITI---EQVQLKAKEIKRYEDMTNKPEEVENMV 367
>gi|323305049|gb|EGA58802.1| Rtf1p [Saccharomyces cerevisiae FostersB]
Length = 493
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 50/252 (19%), Positives = 114/252 (45%), Gaps = 29/252 (11%)
Query: 140 KIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEV 199
K Y++GK TN+ + G +VF++ + S+ F E+ R+ + P+ +
Sbjct: 234 KPYNMGKFYTNQYFGVTQGKDRKVFQMNYFSDGLFAXDEYQRYLRALDNSQMIKPSLHSL 293
Query: 200 ERKSKEIQNGMMYQWKEEDVEQIVREKERF--KPTPYNYAMKKTQLMKERDMAQSKGDDE 257
K+KE+ + + ++ +++VR + +F K + N ++KT L ++ A+ +++
Sbjct: 294 SNKTKEVMDFVNTPLTDKTTDEVVRHRMQFNKKLSGTNAVLEKTVLREKLQYAKETNNEK 353
Query: 258 EASILQRKIDDLEERANELDKAR---TSTISSISYINNRNRR------KNVEEAEKAIMV 308
+ + ++ + E+R + +K S I + + ++NR+ +N E +K
Sbjct: 354 DIAKYSAQLRNFEKRMSVYEKHHENDQSDIKKLGELTSKNRKLNMSNIRNAEHVKKEDSN 413
Query: 309 SCCCCCSGFS---------YRSVKSSASRKVIEYIETKEELNRIRLSRFKMEKLVHLPIF 359
+ FS Y+ ++ + K E I +E+L + ++ K EK
Sbjct: 414 NFDSKSDPFSRLKTRTKVYYQEIQKEENAKAKE-IAQQEKLQEDKDAKDKREK------- 465
Query: 360 GQIVIGCFVRIG 371
++++ F R+G
Sbjct: 466 -ELLVAQFRRLG 476
>gi|189192847|ref|XP_001932762.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187978326|gb|EDU44952.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 501
Score = 41.6 bits (96), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 47/72 (65%), Gaps = 2/72 (2%)
Query: 149 TNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVA-LPTKDEVERKSKEIQ 207
T++ + ++HG+ ++ ++ +F+SNQ FTES+ ++ Q +TE A +PT+ ++RK +++
Sbjct: 280 TDQYVVVQHGSVKKDYQFQFMSNQRFTESDLDTYR-QSLTETNAKVPTQSFLKRKYDDLK 338
Query: 208 NGMMYQWKEEDV 219
+ W + D+
Sbjct: 339 ALQNHYWTDADI 350
>gi|169606160|ref|XP_001796500.1| hypothetical protein SNOG_06116 [Phaeosphaeria nodorum SN15]
gi|111064827|gb|EAT85947.1| hypothetical protein SNOG_06116 [Phaeosphaeria nodorum SN15]
Length = 498
Score = 41.6 bits (96), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 129 IGEISGVCETGKIYSL-GKT----RTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWK 183
+ +I G TGK Y GK T++ +HG+ ++ + +F+SNQ FTE + +K
Sbjct: 256 MAQIKGFS-TGKPYVFEGKNGKRIATDQYAIAQHGSVKKDYSFQFMSNQRFTEQDLDIYK 314
Query: 184 DQCMTEGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERF 229
LPT+ ++RK ++ + W + D+ + + ++F
Sbjct: 315 ASLTENNSKLPTQSYLQRKYNDLMGLQNHHWTDADISARIAKTKKF 360
>gi|410083819|ref|XP_003959487.1| hypothetical protein KAFR_0J02880 [Kazachstania africana CBS 2517]
gi|372466078|emb|CCF60352.1| hypothetical protein KAFR_0J02880 [Kazachstania africana CBS 2517]
Length = 555
Score = 41.2 bits (95), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 85/174 (48%), Gaps = 5/174 (2%)
Query: 140 KIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEV 199
K YS+GK TN+ + G +VF++ F S+ T E+ R+ + + PT +
Sbjct: 298 KPYSMGKFFTNQYFGVTQGKDRKVFQMSFFSDGLITPQEYERYIRSLESSHIPKPTVYTL 357
Query: 200 ERKSKEIQNGMMYQWKEEDVEQIVREKERF--KPTPYNYAMKKTQLMKERDMAQSKGDDE 257
+ KSKE+ + + E+ +IVR + F K + N ++KT L ++ A+ ++
Sbjct: 358 KSKSKELVSFVSEPLTEKLTNEIVRNRMVFNKKLSGTNAVLEKTVLKEKLQYARETNNER 417
Query: 258 EASILQRKIDDLEERANELDKARTSTISS---ISYINNRNRRKNVEEAEKAIMV 308
+ + ++ + E+R N +K + + + + ++N++ N+++ A V
Sbjct: 418 DVAKYSAQLRNFEKRMNMYEKHHENDQTGSKKLGALTSKNKKVNMDKLRNAEHV 471
>gi|453086085|gb|EMF14127.1| plus-3-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 605
Score = 41.2 bits (95), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 97/200 (48%), Gaps = 24/200 (12%)
Query: 131 EISGVCETGKIY----SLGKT-RTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQ 185
+I G E GK Y S+GK T++ + G++E+ + S+ FT++E++R+ D
Sbjct: 307 QIKGFTE-GKPYQMANSVGKPFTTDQYAIVAQGSAEKPWPFSACSDGRFTDAEYVRFMDT 365
Query: 186 CMTEGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKE--RFKPTPYNYA-MKKTQ 242
E + +P++ + +K EI+ + Q+ EE + Q ++ + K P + A +K+
Sbjct: 366 LRKESIKVPSRRFLHKKVAEIKGLLDMQFTEEMLNQKFSKQRAIQLKYDPVHQAKLKRKD 425
Query: 243 LMKERDMAQSKGDDEEASILQRKIDDLEERA--------------NELDKAR-TSTISSI 287
+ + R A+ D+EE + +++ LE A + A+ + S+
Sbjct: 426 IQRRRAEAEQNMDEEEMARCDAELEALENGAANGGPKTAPKVKAKDHASPAKPVAQHESL 485
Query: 288 SYINNRNRRKNVEEAEKAIM 307
+ +N +NR KN E +A++
Sbjct: 486 AILNRQNRAKNQHEVRQALI 505
>gi|242058661|ref|XP_002458476.1| hypothetical protein SORBIDRAFT_03g034370 [Sorghum bicolor]
gi|241930451|gb|EES03596.1| hypothetical protein SORBIDRAFT_03g034370 [Sorghum bicolor]
Length = 1681
Score = 41.2 bits (95), Expect = 0.89, Method: Composition-based stats.
Identities = 25/98 (25%), Positives = 48/98 (48%)
Query: 131 EISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEG 190
+I G ++ + Y GK T+ L++ + + ++ ISNQEFTE E R +
Sbjct: 792 QIVGTGKSAEKYKFGKRTTDITLEILNLDKREAVTIDIISNQEFTEEECKRLRQSIKYGF 851
Query: 191 VALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKER 228
+ T EV+ K++ +Q + W E + ++ ++R
Sbjct: 852 IPRLTVGEVQEKARVLQTLKVNDWIESEKMRLGHLRDR 889
>gi|240274288|gb|EER37805.1| conserved hypothetical protein [Ajellomyces capsulatus H143]
gi|325091636|gb|EGC44946.1| conserved hypothetical protein [Ajellomyces capsulatus H88]
Length = 638
Score = 41.2 bits (95), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 55/111 (49%), Gaps = 8/111 (7%)
Query: 155 LRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEVERKSKEIQNGMMYQW 214
L HG +E+ F S+ TE+EF R++ E + TK V K +I + +Q+
Sbjct: 355 LAHGKAEKEFPFIACSDSPITEAEFNRYRQTMAVEDCKMATKSMVANKVADINRLINHQF 414
Query: 215 KEEDVEQIVREKERFKPTPYNYA--MKKTQLMKERDMAQSKGDDEEASILQ 263
+E++E EK R + T N ++ QL K R A + GD EA+I Q
Sbjct: 415 TKEELE----EKLRRQGTNDNKMKIFERIQLEKRRQEAIATGD--EAAIAQ 459
>gi|58268998|ref|XP_571655.1| rtf1 protein [Cryptococcus neoformans var. neoformans JEC21]
gi|134112812|ref|XP_774949.1| hypothetical protein CNBF1140 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257597|gb|EAL20302.1| hypothetical protein CNBF1140 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227890|gb|AAW44348.1| rtf1 protein, putative [Cryptococcus neoformans var. neoformans
JEC21]
Length = 531
Score = 41.2 bits (95), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 65/131 (49%), Gaps = 7/131 (5%)
Query: 132 ISGVCETGKI------YSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQ 185
I+ V E+G+ Y + R + L +++G++ R+FR+ +SN ESEF R+
Sbjct: 276 IADVDESGQFGSYSIEYQGRQIRETRALLVKYGSASRLFRMADVSNGVIEESEFQRFSMT 335
Query: 186 CMTEGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNYAMKKT-QLM 244
+GV P + +++K EI+ ++++ V ++ + + ++ K QLM
Sbjct: 336 NQADGVKAPKRSFLKKKHDEIKALRERPMTSAEIDRRVDSRKSQESSFTRVSLLKIHQLM 395
Query: 245 KERDMAQSKGD 255
RD+A + D
Sbjct: 396 NTRDLALRRND 406
>gi|449132191|ref|ZP_21768346.1| putative membrane protein [Rhodopirellula europaea 6C]
gi|448888546|gb|EMB18861.1| putative membrane protein [Rhodopirellula europaea 6C]
Length = 587
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 197 DEVERKSKEIQNGMMY-QWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERDMAQSKGD 255
+E+++ +++++NG + Q KE+ +QI + E+ K N+ KK QL ++ D A+ +G
Sbjct: 326 EEIKKLAEQVKNGKLTDQQKEKLNKQIKKMAEQMKAAAKNHEEKKKQLQEKIDQAKREGR 385
Query: 256 DEEASILQRKIDDLE 270
+EEA+ LQ+K+++ E
Sbjct: 386 NEEAAKLQQKLNESE 400
>gi|195399408|ref|XP_002058312.1| GJ15563 [Drosophila virilis]
gi|194150736|gb|EDW66420.1| GJ15563 [Drosophila virilis]
Length = 331
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 132 ISGVCETGKIYSLGKTR--TNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTE 189
+G +I GK R T L LR N+ RVF LE ++N + +E + W+
Sbjct: 120 FAGGHRVAQIQGFGKWRPSTEPTLILRIDNNPRVFALEQLANSYYERAELLEWEYMWQAY 179
Query: 190 GVALPTKDEVERKSKEIQNGMM 211
LPTK V++K K + + +
Sbjct: 180 NFELPTKRIVDQKYKALTDAKL 201
>gi|357154373|ref|XP_003576761.1| PREDICTED: uncharacterized protein LOC100835763 [Brachypodium
distachyon]
Length = 1800
Score = 40.8 bits (94), Expect = 1.2, Method: Composition-based stats.
Identities = 25/98 (25%), Positives = 49/98 (50%)
Query: 131 EISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEG 190
+I G + Y GK T+ L++ + + + V ++ SNQEFTE E R +
Sbjct: 915 QIVGTGIAAEKYKCGKRTTDITLEILNLDKKEVITIDITSNQEFTEEECKRLRQSIKCGF 974
Query: 191 VALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKER 228
++ T EV+ K++ +Q+ + W E + ++ ++R
Sbjct: 975 ISRLTVGEVQEKARILQSVKVNDWIESEKMRLAHLRDR 1012
>gi|327351460|gb|EGE80317.1| vegetative cell wall protein gp1 [Ajellomyces dermatitidis ATCC
18188]
Length = 636
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 55/111 (49%), Gaps = 8/111 (7%)
Query: 155 LRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEVERKSKEIQNGMMYQW 214
L HG +ER F S+ TE+EF R++ E + TK V K +I + +Q+
Sbjct: 353 LAHGKAEREFPFIACSDSPITEAEFNRYRQTMAVEDCKMATKSMVAGKVADINRLINHQF 412
Query: 215 KEEDVEQIVREKERFKPTPYN--YAMKKTQLMKERDMAQSKGDDEEASILQ 263
+E++E EK R + T N ++ QL K R A + GD EA++ Q
Sbjct: 413 TKEELE----EKLRRQGTNDNKMKVFERLQLEKRRQEAIAAGD--EAAVAQ 457
>gi|156840653|ref|XP_001643706.1| hypothetical protein Kpol_507p10 [Vanderwaltozyma polyspora DSM
70294]
gi|156114328|gb|EDO15848.1| hypothetical protein Kpol_507p10 [Vanderwaltozyma polyspora DSM
70294]
Length = 461
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 83/172 (48%), Gaps = 11/172 (6%)
Query: 140 KIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEV 199
K Y++GK TN+ + G +VF++ F S+ T EF R++ + P+ +
Sbjct: 205 KPYNMGKFFTNQYFGVTQGKDRKVFQMNFFSDGPITIEEFDRYQRSLDASNASKPSVYSL 264
Query: 200 ERKSKEIQNGMMYQWKEEDVEQIVREKERF--KPTPYNYAMKKTQLMKERDMAQSKGDDE 257
+K KEI + ++ ++IVR + F K + N ++KT L + A+ ++
Sbjct: 265 TQKLKEINEFVSEPMTDKLTDEIVRNRMVFNKKLSGTNAVLEKTVLRGKLQYAKENNNER 324
Query: 258 EASILQRKIDDLE------ERANELDKARTSTISSISYIN---NRNRRKNVE 300
+ + ++ +LE E+ +E D+A + +++ N N ++ KNVE
Sbjct: 325 DIAKYSTQLRNLEKRLSTYEKHHENDQAGARKLGALTSKNRKVNMDKAKNVE 376
>gi|154270654|ref|XP_001536181.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150409755|gb|EDN05195.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 637
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 55/111 (49%), Gaps = 8/111 (7%)
Query: 155 LRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEVERKSKEIQNGMMYQW 214
L HG +E+ F S+ TE+EF R++ E + TK V K +I + +Q+
Sbjct: 354 LAHGKAEKEFPFIACSDSPITEAEFNRYRQTMAVEDCKMATKSMVANKVADINRLINHQF 413
Query: 215 KEEDVEQIVREKERFKPTPYNYA--MKKTQLMKERDMAQSKGDDEEASILQ 263
+E++E EK R + T N ++ QL K R A + GD EA+I Q
Sbjct: 414 TKEELE----EKLRRQGTNDNKMKIFERIQLEKRRQEAIATGD--EAAIAQ 458
>gi|225554910|gb|EEH03204.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 637
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 55/111 (49%), Gaps = 8/111 (7%)
Query: 155 LRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEVERKSKEIQNGMMYQW 214
L HG +E+ F S+ TE+EF R++ E + TK V K +I + +Q+
Sbjct: 354 LAHGKAEKEFPFIACSDSPITEAEFNRYRQTMAVEDCKMATKSMVANKVADINRLINHQF 413
Query: 215 KEEDVEQIVREKERFKPTPYNYA--MKKTQLMKERDMAQSKGDDEEASILQ 263
+E++E EK R + T N ++ QL K R A + GD EA+I Q
Sbjct: 414 TKEELE----EKLRRQGTNDNKMKIFERIQLEKRRQEAIATGD--EAAIAQ 458
>gi|218191952|gb|EEC74379.1| hypothetical protein OsI_09704 [Oryza sativa Indica Group]
Length = 1796
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 52/99 (52%)
Query: 132 ISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGV 191
+ G + + YS+GK TN L++ + N + + ++ +SNQ+FTE E R + + +
Sbjct: 538 VVGTHKVSEKYSIGKKMTNFALEIMNLNKKEIITMDTVSNQDFTEEECKRLRQSMKYDLI 597
Query: 192 ALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFK 230
+ +++ K+K Q + W E + +++ ++R K
Sbjct: 598 SRLKVGDIQEKAKIFQFVRVNDWFENEKQKLCHLRDRAK 636
>gi|452983431|gb|EME83189.1| hypothetical protein MYCFIDRAFT_89173 [Pseudocercospora fijiensis
CIRAD86]
Length = 604
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 339 ELNRIRLSRFKMEKLVHLPIFGQIVIGCFVRIGIGNN--TGIPLYRVSE 385
+ +R R+ R K+ P F ++V GCF R+ IG N TG +YR+++
Sbjct: 263 DFDRCRIGRSAFAKVCFYPEFEKLVTGCFARVSIGLNRETGQNMYRMAQ 311
>gi|302653674|ref|XP_003018660.1| hypothetical protein TRV_07350 [Trichophyton verrucosum HKI 0517]
gi|291182319|gb|EFE38015.1| hypothetical protein TRV_07350 [Trichophyton verrucosum HKI 0517]
Length = 607
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 13/89 (14%)
Query: 147 TRTNKGLKLRHGNSERVFRLEFI-----------SNQEFTESEFIRWKDQCMTEGVALPT 195
TR + G L G E +R+ I S FTE+EF R++ +G+ +PT
Sbjct: 314 TRVSLGPNLSTGKPE--YRIGLIKTEKEFPFIACSESPFTEAEFNRYRKTMAVDGLKMPT 371
Query: 196 KDEVERKSKEIQNGMMYQWKEEDVEQIVR 224
K V++K +I + + + +E++E+ +R
Sbjct: 372 KSAVDKKVADINRLLAHDFTKEELEEKLR 400
>gi|345562061|gb|EGX45133.1| hypothetical protein AOL_s00173g234 [Arthrobotrys oligospora ATCC
24927]
Length = 680
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 71/151 (47%), Gaps = 4/151 (2%)
Query: 158 GNSERVFRLEFISNQEFTESEFIRWKDQCM-TEGVALPTKDEVERKSKEIQNGMMYQWKE 216
G +E+ R++ IS+ TE E+ RW M + P +ERK K+++N + +Q
Sbjct: 423 GAAEKPTRVDVISDSHPTEDEW-RWYIGAMEVAKLKRPDVAFIERKRKDVKNLITHQLTN 481
Query: 217 EDVEQIVREKERFKP-TPYNYAMKKTQLMKERDMAQSKGDDEEASILQRKID-DLEERAN 274
ED + + R + + P P + L + R +GD+ E + R+++ RA
Sbjct: 482 EDFDAMRRMRTSYYPDDPVIPNLDLPSLKRRRQQLVDEGDEPEILRIDRELEWRAPPRAL 541
Query: 275 ELDKARTSTISSISYINNRNRRKNVEEAEKA 305
+R + + + IN RNR N ++ KA
Sbjct: 542 TAALSRPTQLDVLGQINKRNRETNRQDIRKA 572
>gi|413957175|gb|AFW89824.1| hypothetical protein ZEAMMB73_838328 [Zea mays]
Length = 2233
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Query: 132 ISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGV 191
++G + + YS+GK TN L++ + N + + ++ ISN +FTE E R + Q M GV
Sbjct: 539 VTGTHKVPEKYSIGKKMTNFALEILNLNKKEIITMDTISNHDFTEEECKRLR-QSMKCGV 597
Query: 192 ALPTK-DEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPT 232
K ++ K+K +Q+ + W E + +++ ++R T
Sbjct: 598 ISRLKVGDILEKAKILQSVKVNDWFENEKQRLGHLRDRASET 639
>gi|392573993|gb|EIW67131.1| hypothetical protein TREMEDRAFT_69995 [Tremella mesenterica DSM
1558]
Length = 490
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 72/169 (42%), Gaps = 29/169 (17%)
Query: 150 NKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEVERKSKEIQNG 209
++GL ++G +RVFR+ +SN + + EF R+ + VA P + E+ +K ++I+
Sbjct: 311 DRGLLCQYGRVQRVFRIADVSNGDIDDGEFSRFMSTNHADRVAPPKRSELLKKHEDIKAM 370
Query: 210 MMYQWKEEDVEQIVREKERFKPTPY---------------NYAMKKTQLMK-ERDMAQ-- 251
+++ + V + P+ N A+++ L ER AQ
Sbjct: 371 HRRPMTNDEISRQVAARRAANPSSQRSTLQIEISNLISSRNLALRRNDLPTVERLNAQII 430
Query: 252 SKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRRKNVE 300
S G D E L DDL E D + I IN NR++ E
Sbjct: 431 SMGGDPETGTLVDATDDL----GEYD-------AKIQKINEHNRKRAKE 468
>gi|401625865|gb|EJS43852.1| rtf1p [Saccharomyces arboricola H-6]
Length = 565
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 84/174 (48%), Gaps = 5/174 (2%)
Query: 140 KIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEV 199
K Y++GK TN+ + G +VF++ + S+ FT+ E+ R+ + + P+ +
Sbjct: 306 KPYNMGKFYTNQYFGVTQGKDRKVFQMNYFSDGLFTDDEYQRYLKALDSSHMVKPSLRSL 365
Query: 200 ERKSKEIQNGMMYQWKEEDVEQIVREKERF--KPTPYNYAMKKTQLMKERDMAQSKGDDE 257
KE+ + + ++ +++VR + +F K + N ++KT L + A+ +++
Sbjct: 366 SNTIKEVMDFVNTPLTDKTTDEVVRHRMQFNKKLSGTNAVLEKTVLRGKLQYAKETNNEK 425
Query: 258 EASILQRKIDDLEERANELDKAR---TSTISSISYINNRNRRKNVEEAEKAIMV 308
+ + ++ + E+R + +K S I + + ++NR+ N+ A V
Sbjct: 426 DIAKYSAQLRNFEKRMSVYEKHHENDQSDIKKLGDLTSKNRKLNMNNIRSAEHV 479
>gi|302419415|ref|XP_003007538.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
gi|261353189|gb|EEY15617.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
Length = 588
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 88/196 (44%), Gaps = 24/196 (12%)
Query: 129 IGEISGVCETGKIYSL----GKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKD 184
+ +I G+ GK Y+L G T++ + HG +E+ F F S++ TE EF R+
Sbjct: 288 LAKIKGIA-VGKPYALNGPSGSFVTDQYVIAAHGKAEKEFAFIFCSDKPVTEREFNRYVT 346
Query: 185 QCMTEGVALPTKDEVERKSKEIQNGMMYQWKEEDV-EQIVREKE---RFKPTPYNYAMKK 240
+G+A P + K +I + ++ E++ R+ E +F P ++
Sbjct: 347 TLQVDGMAFPKTQVLLNKIDDINKFVERSLTSAEIDEKVARKNELRKKFDPE------RR 400
Query: 241 TQLMKERDMAQSKGDDEEASILQRKIDDLEER----ANELDKARTSTISS-----ISYIN 291
+L E + A + G + LQ ++DDL LD +T++ ++ ++ IN
Sbjct: 401 DRLRWEIEEATAAGHTRRIAELQEELDDLLSNRLAFRTTLDAPKTTSTNAAQQDRLADIN 460
Query: 292 NRNRRKNVEEAEKAIM 307
RR+N KA +
Sbjct: 461 RERRRQNAANVGKAQL 476
>gi|261195923|ref|XP_002624365.1| conserved hypothetical protein [Ajellomyces dermatitidis SLH14081]
gi|239587498|gb|EEQ70141.1| conserved hypothetical protein [Ajellomyces dermatitidis SLH14081]
gi|239614451|gb|EEQ91438.1| conserved hypothetical protein [Ajellomyces dermatitidis ER-3]
Length = 636
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 55/111 (49%), Gaps = 8/111 (7%)
Query: 155 LRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEVERKSKEIQNGMMYQW 214
L HG +ER F S+ T++EF R++ E + TK V K +I + +Q+
Sbjct: 353 LAHGKAEREFPFIACSDSPITDAEFNRYRQTMAVEDCKMATKSMVAGKVADINRLINHQF 412
Query: 215 KEEDVEQIVREKERFKPTPYN--YAMKKTQLMKERDMAQSKGDDEEASILQ 263
+E++E EK R + T N ++ QL K R A + GD EA++ Q
Sbjct: 413 TKEELE----EKLRRQGTNDNKMKVFERLQLEKRRQEAIAAGD--EAAVAQ 457
>gi|346976356|gb|EGY19808.1| RNA polymerase-associated protein RTF1 [Verticillium dahliae
VdLs.17]
Length = 610
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 88/196 (44%), Gaps = 24/196 (12%)
Query: 129 IGEISGVCETGKIYSL----GKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKD 184
+ +I G+ GK Y+L G T++ + HG +E+ F F S++ TE EF R+
Sbjct: 308 LAKIKGIA-VGKPYALNGPSGSFVTDQYVIAAHGKAEKEFAFIFCSDKPVTEREFNRYVT 366
Query: 185 QCMTEGVALPTKDEVERKSKEIQNGMMYQWKEEDV-EQIVREKE---RFKPTPYNYAMKK 240
+G+A P + K +I + ++ E++ R+ E +F P ++
Sbjct: 367 TLQVDGMAFPKTQVLLNKIDDINKFVERSLTSAEIDEKVARKNELRKKFDPE------RR 420
Query: 241 TQLMKERDMAQSKGDDEEASILQRKIDDLEER----ANELDKARTSTISS-----ISYIN 291
+L E + A + G + LQ ++DDL LD +T++ ++ ++ IN
Sbjct: 421 DRLRWEIEEATAAGHTRRIAELQEELDDLLSNRLAFRTTLDAPKTTSTNAAQQDRLADIN 480
Query: 292 NRNRRKNVEEAEKAIM 307
RR+N KA +
Sbjct: 481 RERRRQNAANVGKAQL 496
>gi|344299732|gb|EGW30085.1| hypothetical protein SPAPADRAFT_63710 [Spathaspora passalidarum
NRRL Y-27907]
Length = 270
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 71/148 (47%), Gaps = 6/148 (4%)
Query: 164 FRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEVERKSKEIQNGMMYQWKEEDVEQIV 223
F + S+ ++ EF R+ D+ ++ D+V K +++Q ++D+ +++
Sbjct: 38 FPISVFSDSPISQDEFNRYLDELKKTNESIDYLDDVNDKFEQLQQFFNKGMSDKDINEML 97
Query: 224 REKERFKP----TPYNYAMKKTQLMKERDMAQSKGDDEEASILQRKIDDLEERANEL--D 277
K++ + + Y+ K +LM E +A+ +G + L ++ +++ NE
Sbjct: 98 ARKKKLQDQKGISGYDAVATKAKLMDELKIAKQQGHTTKVRDLINRLKNIDSILNEQTNS 157
Query: 278 KARTSTISSISYINNRNRRKNVEEAEKA 305
A + + SS+S IN RNR+ N KA
Sbjct: 158 NAGSDSYSSMSKINERNRKLNQTNIRKA 185
>gi|452844378|gb|EME46312.1| hypothetical protein DOTSEDRAFT_70340 [Dothistroma septosporum
NZE10]
Length = 618
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 87/188 (46%), Gaps = 20/188 (10%)
Query: 139 GKIYSL----GKT-RTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVAL 193
GK Y L GK T++ + HG +E+ + S+ +F E+EF R+++ + + +
Sbjct: 324 GKPYQLENAHGKQFTTDQYAIVAHGAAEKAWPFSACSDGKFNEAEFTRFRETLQKDNINM 383
Query: 194 PTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKER-----FKPTPYNYAMKKTQLMKERD 248
P++ + K I + ++ Q ED QI K+R F P + K+ + K R
Sbjct: 384 PSRRFLTGKLDAIHS-LLNQKFTEDSLQIKFAKQRAMELKFDPV-HIVKQKRKDIAKRRA 441
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDK--------ARTSTISSISYINNRNRRKNVE 300
A+ GD+EE + +++ L+ A + A+ + ++ +N+ NR K E
Sbjct: 442 EAKQIGDEEEIARCDSELEALDNSAASTNGAAKVKPAIAKAAPHDRLAQLNHTNRHKEQE 501
Query: 301 EAEKAIMV 308
+A++
Sbjct: 502 RVRQALIA 509
>gi|357467443|ref|XP_003604006.1| Flavonol synthase/flavanone 3-hydroxylase [Medicago truncatula]
gi|355493054|gb|AES74257.1| Flavonol synthase/flavanone 3-hydroxylase [Medicago truncatula]
Length = 1942
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 131 EISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTE 176
+++G C+T + Y +GK T+ L++ + N + ++ ISNQEFTE
Sbjct: 1098 QVAGTCKTAEPYKVGKKMTDILLEILNLNKTEIVSMDIISNQEFTE 1143
>gi|440637946|gb|ELR07865.1| hypothetical protein GMDG_02747 [Geomyces destructans 20631-21]
Length = 607
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 85/188 (45%), Gaps = 20/188 (10%)
Query: 137 ETGKIYSLGKTR-----TNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGV 191
E GK Y+L K T + + HG + R + SN TE+E+ R+ C+ E V
Sbjct: 315 EEGKPYALEKENGQTFVTTQYVTAAHGKAVRPWPFFTCSNSPITEAEYKRYMQTCLVEKV 374
Query: 192 ALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKERFKPTPYNY-AMKKTQLMKERDMA 250
+PT+ ++ + I + W E ++ + +R R Y ++ + +L K + A
Sbjct: 375 NVPTRRQLATQVGRIDALVNRSWTEAELTEKLR---RSGALAAKYKSVDRNKLNKRLNQA 431
Query: 251 QSKGDDEEASILQRKIDDLEER----ANELDK--ART-----STISSISYINNRNRRKNV 299
+ GD + ++ ++ LE L K A+T S ++ IN+ NRRKN
Sbjct: 432 KLLGDVDRQEEIKAELAALEGPKLAFGTSLHKTPAQTGPKALSQQDRLAIINHENRRKNN 491
Query: 300 EEAEKAIM 307
EE + A +
Sbjct: 492 EEIKAAQL 499
>gi|414880478|tpg|DAA57609.1| TPA: hypothetical protein ZEAMMB73_873535 [Zea mays]
Length = 1254
Score = 39.3 bits (90), Expect = 3.6, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 46/98 (46%)
Query: 131 EISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEG 190
+I G + + Y GK T+ L + + + ++ ISNQEFTE E R +
Sbjct: 388 QIVGTGRSAEKYKSGKRTTDITLVILNLDKREAVTIDIISNQEFTEEECKRLRQSIKYGF 447
Query: 191 VALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKER 228
+ T EV+ K+K +Q + W E + ++ ++R
Sbjct: 448 IPRLTVGEVQEKAKVLQTLKVNDWIESEKMRLGHLRDR 485
>gi|365990611|ref|XP_003672135.1| hypothetical protein NDAI_0I03240 [Naumovozyma dairenensis CBS 421]
gi|343770909|emb|CCD26892.1| hypothetical protein NDAI_0I03240 [Naumovozyma dairenensis CBS 421]
Length = 563
Score = 38.9 bits (89), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 81/169 (47%), Gaps = 5/169 (2%)
Query: 142 YSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEVER 201
Y +G TN+ L + G+ +V ++ S+ FT +EF R+ + P+ +
Sbjct: 305 YRMGDFFTNQYLGVTQGHDRKVLQMNIFSDGLFTSAEFDRYTRALENSHLTKPSIHVLRG 364
Query: 202 KSKEIQNGMMYQWKEEDVEQIVREKERF--KPTPYNYAMKKTQLMKERDMAQSKGDDEEA 259
KSKEIQ + + + IVR + F K + N ++KT L + A+ ++ +
Sbjct: 365 KSKEIQAFVSEPLTAKMTDAIVRNRMMFNKKLSGTNAVLEKTVLKDKLRYARENNNERDV 424
Query: 260 SILQRKIDDLEERANELDKARTST---ISSISYINNRNRRKNVEEAEKA 305
+ ++ +LE+R + +K + ++ + + ++NR+ N+++ A
Sbjct: 425 AKYSSQLRNLEKRMSVYEKHHENDQLGMNKLGALTSKNRKVNMDKIRNA 473
>gi|50302195|ref|XP_451031.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640162|emb|CAH02619.1| KLLA0A00737p [Kluyveromyces lactis]
Length = 582
Score = 38.9 bits (89), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 79/166 (47%), Gaps = 5/166 (3%)
Query: 140 KIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEV 199
K Y++GK TN+ + G ++F++ + S+ T+ E+ R+ + P+ +
Sbjct: 323 KPYNMGKFFTNQYFGVTQGKDRKIFQMSYFSDSPVTQPEYERYLLSLEKYDITQPSPYIL 382
Query: 200 ERKSKEIQNGMMYQWKEEDVEQIVREKERF--KPTPYNYAMKKTQLMKERDMAQSKGDDE 257
KSK + + + ++ IVR + F K + N M+K L ++ ++ GD E
Sbjct: 383 NNKSKAVNEFVCEPLTPKLMDDIVRNRMVFNKKLSGTNAVMEKQVLKEKLQFSKQSGDIE 442
Query: 258 EASILQRKIDDLEERANELDKAR---TSTISSISYINNRNRRKNVE 300
S ++ LE+R + +K + I ++ + ++NR+ N++
Sbjct: 443 SESKYANQLKALEKRLSSYEKHHENDQNDIKTLGALTSKNRKLNID 488
>gi|412991195|emb|CCO16040.1| predicted protein [Bathycoccus prasinos]
Length = 664
Score = 38.9 bits (89), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 91/210 (43%), Gaps = 47/210 (22%)
Query: 131 EISGVCE-----TGKIYSL----------GKTRTNKGLKLRHGNSERVFRLEFISN---- 171
+I+G+ + T + YSL K T K L LR G+ E+ FR+ SN
Sbjct: 276 QIAGIADGSYQGTTQTYSLKAYEYNDGTNAKKSTKKWLILRWGSHEKTFRISETSNRVDD 335
Query: 172 ------------------------QEFTESEFIRWKDQCM-TEGVALPTKDEVERKSKEI 206
+ F SEF +W + T LP+ D+ + SK++
Sbjct: 336 AFARANDESNATVGVGSLILDHDDERFKNSEFGKWYEHVKKTAKKYLPSVDDCDIISKKL 395
Query: 207 QNGMMYQWKEEDVEQIVR-EKERFKPTPYNYAMKKTQLMKERDMAQSKGDDEEASILQRK 265
Y++ EDV++++ K++ N+ +K Q+ + A+ +GD E+ L+
Sbjct: 396 TGADEYRYTAEDVQKMLELNKQKRGGVSTNFIFEKEQMKMQLAKAREEGDVEQQEKLEEA 455
Query: 266 IDDLEER-ANELDKARTSTISSISYINNRN 294
I +L E+ N+++K R ++ IN +N
Sbjct: 456 IKELNEKIENKINK-RGGNQKVMADINKKN 484
>gi|169783258|ref|XP_001826091.1| RNA polymerase II transcription elongation factor Rtf1p
[Aspergillus oryzae RIB40]
gi|83774835|dbj|BAE64958.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391864992|gb|EIT74284.1| Paf1/RNA polymerase II complex, RTF1 component [Aspergillus oryzae
3.042]
Length = 612
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 55/112 (49%), Gaps = 2/112 (1%)
Query: 155 LRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEVERKSKEIQNGMMYQW 214
L HG +ER F S+ TE+EF R++ E + TK V K +I + +++
Sbjct: 347 LAHGKAEREFPFVACSDSAITEAEFNRYRQTMAVEDCKMATKSTVAEKVVDINRLLNHKF 406
Query: 215 KEEDVEQIVREKERFKPTPYNYAMKKTQLMKERDMAQSKGDDEEASILQRKI 266
E++ + +R++ + K+ + K+ +A++ GDD E L+ ++
Sbjct: 407 TPEELTEKLRKQGSLDTK--STVFKRMETEKKLKLAKAAGDDAEVERLESEL 456
>gi|152998857|ref|YP_001364538.1| two component transcriptional regulator [Shewanella baltica OS185]
gi|151363475|gb|ABS06475.1| two component transcriptional regulator, winged helix family
[Shewanella baltica OS185]
Length = 235
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 10/107 (9%)
Query: 164 FRLEFISNQEFTESEFIRWKDQCMTEGVALPTKD--EVERKSKEIQNG--MMYQWKEEDV 219
+++E ISN S + W+ + + LP KD V R+ + NG +M+ +EE++
Sbjct: 27 YQVEIISNGVLAVSRILEWQPALVILDIMLPQKDGLSVCREVRSQYNGYILMFTAREEEI 86
Query: 220 EQIV-----REKERFKPTPYNYAMKKTQLMKERD-MAQSKGDDEEAS 260
+QIV + KP + K + RD +A+S ++++ S
Sbjct: 87 DQIVGLEIGADDYLLKPVKPRMLLAKIKAFLRRDRLAESIAENQQVS 133
>gi|449461655|ref|XP_004148557.1| PREDICTED: zinc finger CCCH domain-containing protein 19-like
[Cucumis sativus]
Length = 1470
Score = 38.5 bits (88), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 50/98 (51%)
Query: 131 EISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEG 190
++ G + + Y +GK T+ L++ + N V ++ ISNQEFTE E R +
Sbjct: 599 QVVGTSKASEPYKVGKRMTDILLEILNLNKTEVVSIDIISNQEFTEDECKRLRQSMKCGI 658
Query: 191 VALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKER 228
+ T +++ ++ +Q+ + W E ++ ++ ++R
Sbjct: 659 INRLTVGDLQERAMSLQDARVKDWMETEIVRLSHLRDR 696
>gi|449515615|ref|XP_004164844.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 19-like [Cucumis sativus]
Length = 1475
Score = 38.5 bits (88), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 50/98 (51%)
Query: 131 EISGVCETGKIYSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEG 190
++ G + + Y +GK T+ L++ + N V ++ ISNQEFTE E R +
Sbjct: 599 QVVGTSKASEPYKVGKRMTDILLEILNLNKTEVVSIDIISNQEFTEDECKRLRQSMKCGI 658
Query: 191 VALPTKDEVERKSKEIQNGMMYQWKEEDVEQIVREKER 228
+ T +++ ++ +Q+ + W E ++ ++ ++R
Sbjct: 659 INRLTVGDLQERAMSLQDARVKDWMETEIVRLSHLRDR 696
>gi|354548479|emb|CCE45215.1| hypothetical protein CPAR2_702280 [Candida parapsilosis]
Length = 568
Score = 38.5 bits (88), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 86/195 (44%), Gaps = 35/195 (17%)
Query: 140 KIYSLGKTRTNKG-LKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDE 198
K Y +G ++ + L ++ N ++ F + S+ T+ EF R+ + G ++ D+
Sbjct: 293 KAYKMGSSKYDLYFLVSQNKNQKKPFAMNLFSDSPITQDEFDRYLKELDKTGESMDLLDD 352
Query: 199 VERKSKEIQNGMMYQWKEEDVEQIVREKERFKP-----TPYNYAMKKTQLMKERDMAQSK 253
V K K++Q ++DV +++ K+R + T Y+ K +L+ E + + +
Sbjct: 353 VNDKFKQLQTLFTTGLTDKDVNEMIARKQRMQRQSGNYTTYDAVKTKAKLLDEYKICKQQ 412
Query: 254 GDDEEASILQRKIDDLEERAN-------ELDKARTSTI----------------SSISYI 290
G+ LQ+ ++ LEE N + A T+ SS++ +
Sbjct: 413 GN------LQKSMEILEEVKNIDAVLQDQTGAASTAASTTGSGSLSSSAVAALQSSMAKV 466
Query: 291 NNRNRRKNVEEAEKA 305
N RNR+ N E KA
Sbjct: 467 NERNRKLNQENIRKA 481
>gi|195047268|ref|XP_001992306.1| GH24279 [Drosophila grimshawi]
gi|193893147|gb|EDV92013.1| GH24279 [Drosophila grimshawi]
Length = 342
Score = 38.1 bits (87), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 33/65 (50%)
Query: 142 YSLGKTRTNKGLKLRHGNSERVFRLEFISNQEFTESEFIRWKDQCMTEGVALPTKDEVER 201
+S + + L LR ++ RVF L+ +SN F +E + WK LP++ VE+
Sbjct: 140 FSKWRPSSEPPLILRIDSNPRVFCLDQLSNSYFDAAELLHWKHVWQVNNFELPSRSFVEK 199
Query: 202 KSKEI 206
K K I
Sbjct: 200 KYKTI 204
>gi|440714493|ref|ZP_20895072.1| hypothetical protein RBSWK_02129 [Rhodopirellula baltica SWK14]
gi|436440689|gb|ELP33993.1| hypothetical protein RBSWK_02129 [Rhodopirellula baltica SWK14]
Length = 587
Score = 38.1 bits (87), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 197 DEVERKSKEIQNGMMY-QWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERDMAQSKGD 255
+E+++ +K++++G + Q KE+ +QI + E+ K N+ KK QL ++ + A+ +G
Sbjct: 326 EEIKKLAKQVKDGKLTDQQKEKLNKQIKKMAEQMKEAAKNHEEKKKQLREKIEQAKKEGR 385
Query: 256 DEEASILQRKIDDLE 270
+EEA+ LQ+K+++ E
Sbjct: 386 NEEAAKLQQKLNESE 400
>gi|32476390|ref|NP_869384.1| hypothetical protein RB10354 [Rhodopirellula baltica SH 1]
gi|32446935|emb|CAD78841.1| hypothetical protein-putative transmembrane protein [Rhodopirellula
baltica SH 1]
Length = 587
Score = 38.1 bits (87), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 197 DEVERKSKEIQNGMMY-QWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERDMAQSKGD 255
+E+++ +K++++G + Q KE+ +QI + E+ K N+ KK QL ++ + A+ +G
Sbjct: 326 EEIKKLAKQVKDGKLTDQQKEKLNKQIKKMAEQMKEAAKNHEEKKKQLREKIEQAKKEGR 385
Query: 256 DEEASILQRKIDDLE 270
+EEA+ LQ+K+++ E
Sbjct: 386 NEEAAKLQQKLNESE 400
>gi|417304665|ref|ZP_12091675.1| conserved hypothetical protein, membrane [Rhodopirellula baltica
WH47]
gi|327539020|gb|EGF25654.1| conserved hypothetical protein, membrane [Rhodopirellula baltica
WH47]
Length = 587
Score = 38.1 bits (87), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 197 DEVERKSKEIQNGMMY-QWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERDMAQSKGD 255
+E+++ +K++++G + Q KE+ +QI + E+ K N+ KK QL ++ + A+ +G
Sbjct: 326 EEIKKLAKQVKDGKLTDQQKEKLNKQIKKMAEQMKEAAKNHEEKKKQLREKIEQAKKEGR 385
Query: 256 DEEASILQRKIDDLE 270
+EEA+ LQ+K+++ E
Sbjct: 386 NEEAAKLQQKLNESE 400
>gi|395502700|ref|XP_003755715.1| PREDICTED: C-myc promoter-binding protein [Sarcophilus harrisii]
Length = 1242
Score = 37.7 bits (86), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 15/141 (10%)
Query: 158 GNSERVFRLEFISNQEFTESEFIRW--KDQCMTEGVALPTKDEVERKSKEIQNGMMYQWK 215
GN ER FR + E T E + W ++ ++ GV + + R S+E G M +
Sbjct: 366 GNIERSFRKRHKNETEPTLHEQMSWENRNHNLSGGVLMGLM--INRISQEESPGEMVEKL 423
Query: 216 EEDVEQIVREKERFKPTPYNYAMKKTQLMKERDMAQSKGDDEEA-----SILQRKID--- 267
D +I+ + P P + L +RD + + D++ S L KID
Sbjct: 424 GADA-KILSNVMQKNPRPNTLDIGNPSLRSKRDSLEKESSDDDTPFEGTSCLTDKIDSPV 482
Query: 268 --DLEERANELDKARTSTISS 286
DLE+ NE+D ++T T S+
Sbjct: 483 IFDLEDLDNEVDTSKTRTTST 503
>gi|421613999|ref|ZP_16055068.1| hypothetical protein RBSH_04879 [Rhodopirellula baltica SH28]
gi|408495206|gb|EKJ99795.1| hypothetical protein RBSH_04879 [Rhodopirellula baltica SH28]
Length = 587
Score = 37.7 bits (86), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 197 DEVERKSKEIQNGMMY-QWKEEDVEQIVREKERFKPTPYNYAMKKTQLMKERDMAQSKGD 255
+E+++ +K++++G + Q KE+ +QI + E+ K N+ KK QL ++ + A+ +G
Sbjct: 326 EEIKKLAKQVKDGKLTDQQKEKLNKQIKKMAEQMKEAAKNHEEKKKQLREKIEQAKKEGR 385
Query: 256 DEEASILQRKIDDLE 270
+EEA+ LQ+K+++ E
Sbjct: 386 NEEAAKLQQKLNESE 400
>gi|47224606|emb|CAG03590.1| unnamed protein product [Tetraodon nigroviridis]
Length = 3029
Score = 37.7 bits (86), Expect = 9.8, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 36/52 (69%), Gaps = 2/52 (3%)
Query: 249 MAQSKGDDEEASILQRKIDDLEERANELDKARTSTISSISYINNRNRR-KNV 299
M ++ G EEA+ LQ ++DD+ +R N+L KA++++IS ++ + +R KNV
Sbjct: 2219 MVKALGSSEEAAFLQHRLDDMNQRWNDL-KAKSASISFCAFQTSNHRTIKNV 2269
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.133 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,816,562,505
Number of Sequences: 23463169
Number of extensions: 237266210
Number of successful extensions: 792182
Number of sequences better than 100.0: 843
Number of HSP's better than 100.0 without gapping: 369
Number of HSP's successfully gapped in prelim test: 474
Number of HSP's that attempted gapping in prelim test: 789952
Number of HSP's gapped (non-prelim): 2354
length of query: 388
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 244
effective length of database: 8,980,499,031
effective search space: 2191241763564
effective search space used: 2191241763564
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 78 (34.7 bits)