BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14635
(162 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|340727459|ref|XP_003402061.1| PREDICTED: protein patched-like [Bombus terrestris]
Length = 1292
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/181 (34%), Positives = 96/181 (53%), Gaps = 25/181 (13%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
MFL+T T+A+ + + V E TG+VL++TGLS++L+ + AFF+A++IPIPALR
Sbjct: 531 MFLLTHTYAELS----VNEVPSGEQTGVVLKRTGLSVLLAGISNVSAFFAAAIIPIPALR 586
Query: 61 VFNLQLAILILFNMFVLLLVYPAIE----------------CWVGSAAPKDQS----LLG 100
VF Q IL+LFN+ +LLV+PA+ C + S A + ++ L
Sbjct: 587 VFCFQAGILLLFNLAAMLLVFPAMVSLDLRRRRSGRSDILCCCLPSNAERRETCTQILTS 646
Query: 101 EDLMTSDEEEDEHTSSACKLKSYSEFSCRYLARQH-ARLITRPGVKMIVVFGFIGVLIAS 159
+++ +E T + C FS LA +H A +TRP K+ + I VL+
Sbjct: 647 QNVQNESWCSEEDTLTGCSQDDCLTFSLTQLAAKHYAPFVTRPATKVFGMMILIAVLVGC 706
Query: 160 V 160
V
Sbjct: 707 V 707
>gi|357606468|gb|EHJ65079.1| putative hedgehog receptor [Danaus plexippus]
Length = 1474
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 99/189 (52%), Gaps = 34/189 (17%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
MFL+T T+ + Q V E TG+VL+K+GLS++L+S+C +AF +A+L+PIPA R
Sbjct: 557 MFLLTHTYVE-----QAGDVPREERTGLVLKKSGLSVLLASLCNVMAFLAAALLPIPAFR 611
Query: 61 VFNLQLAILILFNMFVLLLVYPA---IECWVGSAAPKDQ--SLLGEDLMTSDEEEDEHTS 115
VF LQ AIL+LFN+ +LLV+PA ++ SAA D LL E M + D S
Sbjct: 612 VFCLQAAILLLFNLGSMLLVFPAMISLDLRRRSAARADLLCCLLPESPMPRKKIPDRTKS 671
Query: 116 SACK-----------------LKSYSEFSC-------RYLARQHARLITRPGVKMIVVFG 151
K + + + +C R+ Q+A I RP +K+ +
Sbjct: 672 RNSKNDKNNRLDTSRQPLDPDVTEHEQKTCCLSLSLTRWAKNQYAPFIMRPAIKVTSMLA 731
Query: 152 FIGVLIASV 160
I V++ASV
Sbjct: 732 VIAVILASV 740
>gi|193290170|ref|NP_001123271.1| patched [Nasonia vitripennis]
Length = 1307
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 104/189 (55%), Gaps = 37/189 (19%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
MFL+T T+A+ + + + N+ TG+VL++ GLSI+L+ +C V+FF+A++IPIPALR
Sbjct: 539 MFLLTHTYAELSVYD----LPRNQQTGVVLKRAGLSILLTGLCNVVSFFAAAIIPIPALR 594
Query: 61 VFNLQLAILILFNMFVLLLVYPAIECWVGSAAPKDQSLLGEDLM----TSDEEEDE---H 113
VF+LQ A+L+LFN+ +LL++PA+ + + ++ L D+M +D E E
Sbjct: 595 VFSLQAAVLLLFNLGAMLLIFPAM---ISLDLRRRRAGL-YDIMCCVRANDSESQEACTQ 650
Query: 114 TSSACKLKS----------------------YSEFSCRYLARQHARLITRPGVKMIVVFG 151
S CKL S YS + +A+ +A+ +TRP K+I V
Sbjct: 651 VHSRCKLASINNNESFAGEEETLTGFSSNDCYSFSPTQLVAKHYAKFVTRPFTKVIGVML 710
Query: 152 FIGVLIASV 160
+L AS
Sbjct: 711 LAALLTAST 719
>gi|308512755|gb|ADO33031.1| hedgehog receptor [Biston betularia]
Length = 723
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/192 (35%), Positives = 99/192 (51%), Gaps = 37/192 (19%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
MFL+T T+ + Q V E TG+VL+K+GLS++L+S+C +AF +A+L+PIPALR
Sbjct: 286 MFLLTHTYVE-----QSGDVPREERTGLVLKKSGLSVLLASLCNVMAFLAAALLPIPALR 340
Query: 61 VFNLQLAILILFNMFVLLLVYPA---IECWVGSAA--------------PKDQSLLGEDL 103
VF LQ AIL+LFN+ +LLV+PA ++ SA+ PK L E
Sbjct: 341 VFCLQAAILLLFNLGSMLLVFPAMISLDLRRRSASRADLLCCLTPESPLPKRTKKLAERT 400
Query: 104 M-------------TSDEEEDEHTSSACKLKS--YSEFSCRYLARQHARLITRPGVKMIV 148
TS + D + A K+ S ++ Q+A I RP VK+
Sbjct: 401 RGRTVKTDKTNWKDTSKQPLDPQDTGAAAKKTCCISISLTKWAKNQYAPFIMRPSVKVTS 460
Query: 149 VFGFIGVLIASV 160
+ I V++ASV
Sbjct: 461 MLALIAVILASV 472
>gi|242015824|ref|XP_002428547.1| patched 1, putative [Pediculus humanus corporis]
gi|212513181|gb|EEB15809.1| patched 1, putative [Pediculus humanus corporis]
Length = 1320
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 64/84 (76%), Gaps = 5/84 (5%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
MF +T T+A+ ++ D E TG+VL+KTGLS++++S+C FF+A+LIPIPALR
Sbjct: 508 MFHLTHTYAESDNEGNID-----EQTGLVLKKTGLSVLMTSLCIMCTFFAAALIPIPALR 562
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
VF+LQ A+L+LFN+ +LLV+PAI
Sbjct: 563 VFSLQAAVLVLFNIGAMLLVFPAI 586
>gi|4883640|gb|AAD31595.1|AF117898_1 putative hedgehog receptor [Junonia coenia]
Length = 1318
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 96/190 (50%), Gaps = 38/190 (20%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
MFL+T T+ + Q V E TG+VL+K+GLS++L+S+C +AF +A+L+PIPA R
Sbjct: 508 MFLLTHTYVE-----QAGDVPREERTGLVLKKSGLSVLLASLCNVMAFLAAALLPIPAFR 562
Query: 61 VFNLQLAILILFNMFVLLLVYPA---------------IECWVGSAAPKDQSLLGEDLMT 105
VF LQ AIL+LFN+ +LLV+PA + C + +P + + E T
Sbjct: 563 VFCLQAAILLLFNLGSILLVFPAMISLDLRRRSAARADLLCCLMPESPLPKKKIPERAKT 622
Query: 106 S---------------DEEEDEHTSSACKLKSYSEFSCRYLARQHARLITRPGVKMIVVF 150
D + E+ + C L S ++ Q+A I RP VK+ +
Sbjct: 623 RKNDKTHRIDTTRQPLDPDVSENVTKTCCL---SVSLTKWAKNQYAPFIMRPAVKVTSML 679
Query: 151 GFIGVLIASV 160
I V++ SV
Sbjct: 680 ALIAVILTSV 689
>gi|309253981|gb|ADO60879.1| patched [Bicyclus anynana]
Length = 744
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 97/189 (51%), Gaps = 34/189 (17%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
MFL+T T+ + Q V E TG+VL+K+GLS++L+S+C +AF +A+L+PIPA R
Sbjct: 286 MFLLTHTYVE-----QAGDVPREERTGLVLKKSGLSVLLASLCNVMAFLAAALLPIPAFR 340
Query: 61 VFNLQLAILILFNMFVLLLVYPA---------------IECWVGSAAPKDQSLLGEDLMT 105
VF LQ AIL+LFN+ +LLV+PA + C + +P + + E +
Sbjct: 341 VFCLQAAILLLFNLGSMLLVFPAMISLDLRRISAARADLLCCLMPESPLPKKKIPERAKS 400
Query: 106 SDEEEDEH--------------TSSACKLKSYSEFSCRYLARQHARLITRPGVKMIVVFG 151
+ D++ T K S +++ Q+A I RP VK+ +
Sbjct: 401 RSGKTDKNNRLDTTRQPLDPDVTGEQPKACCLSVSLTKWVKNQYAPFIMRPAVKVTSMLA 460
Query: 152 FIGVLIASV 160
I V++ASV
Sbjct: 461 LIVVILASV 469
>gi|307191579|gb|EFN75077.1| Protein patched [Harpegnathos saltator]
Length = 1191
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/84 (51%), Positives = 62/84 (73%), Gaps = 4/84 (4%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
MFL+T T+A+ + + V E TG+VL++TGLS++L+ + AFF+A+LIPIPALR
Sbjct: 395 MFLLTHTYAELS----VNEVPSGEQTGVVLKRTGLSVLLTGLSNVSAFFAAALIPIPALR 450
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
VF LQ IL+LFN+ +LLV+PA+
Sbjct: 451 VFCLQAGILLLFNLAAMLLVFPAM 474
>gi|380011471|ref|XP_003689826.1| PREDICTED: LOW QUALITY PROTEIN: protein patched-like [Apis florea]
Length = 1327
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 62/84 (73%), Gaps = 4/84 (4%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
MFL+T T+A+ + + V E TG+VL++TGLS++L+ + AFF+A++IPIPALR
Sbjct: 529 MFLLTHTYAELS----VNEVPSGEQTGVVLKRTGLSVLLAGISNVSAFFAAAIIPIPALR 584
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
VF LQ IL+LFN+ +LLV+PA+
Sbjct: 585 VFCLQAGILLLFNLAAMLLVFPAM 608
>gi|443694342|gb|ELT95505.1| hypothetical protein CAPTEDRAFT_226628 [Capitella teleta]
Length = 1464
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 62/84 (73%), Gaps = 4/84 (4%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
MFL+ TFA+++ K+ + +E TG VLR+ G+S++L+SV AFF A+++PIPALR
Sbjct: 521 MFLVAHTFAEHSGKD----IPYHEQTGEVLRRVGVSVVLTSVSNMCAFFLAAIVPIPALR 576
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F LQ+ +L++FN+ L++V+PA+
Sbjct: 577 AFCLQVGVLVMFNLVTLVIVFPAV 600
>gi|383849191|ref|XP_003700229.1| PREDICTED: LOW QUALITY PROTEIN: protein patched-like [Megachile
rotundata]
Length = 1327
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 62/84 (73%), Gaps = 4/84 (4%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
MFL+T T+A+ + + V E TG+VL++TGLS++L+ + AFF+A++IPIPALR
Sbjct: 530 MFLLTHTYAELS----VNEVPSGEQTGVVLKRTGLSVLLAGLSNVSAFFAAAIIPIPALR 585
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
VF LQ IL+LFN+ +LLV+PA+
Sbjct: 586 VFCLQAGILLLFNLAAMLLVFPAM 609
>gi|300859531|gb|ADK38670.1| patched [Platynereis dumerilii]
Length = 974
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 69/111 (62%), Gaps = 19/111 (17%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
MFL+ TF++ ++ + ++ E TG L++TG+S++L+S+ + AFF A++IPIPALR
Sbjct: 536 MFLVAHTFSENANRKE---IEYMEQTGHCLKRTGVSVMLTSISNACAFFLAAIIPIPALR 592
Query: 61 VFNLQLAILILFNMFVLLLVYPAIE----------------CWVGSAAPKD 95
F LQ AIL+LFNM +L+V+PA C+ GS+AP D
Sbjct: 593 AFALQAAILVLFNMVSVLVVFPAFVSVDLYRKKEHRVDVFCCFTGSSAPND 643
>gi|350421906|ref|XP_003492995.1| PREDICTED: protein patched-like [Bombus impatiens]
Length = 1011
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 61/84 (72%), Gaps = 4/84 (4%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
MFL+T T+A+ + + V E TG+VL++TGLS++L+ + AFF+A++IPIPALR
Sbjct: 214 MFLLTHTYAELS----VNEVPSGEQTGVVLKRTGLSVLLAGISNVSAFFAAAIIPIPALR 269
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
VF Q IL+LFN+ +LLV+PA+
Sbjct: 270 VFCFQAGILLLFNLAAMLLVFPAM 293
>gi|332030584|gb|EGI70272.1| Protein patched [Acromyrmex echinatior]
Length = 1114
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 63/84 (75%), Gaps = 4/84 (4%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
MFL+T T+A+ + + V +E TG+VL++TGLS++L+ + +AFF+AS+IPIPALR
Sbjct: 319 MFLLTHTYAELS----VNEVPSSEQTGVVLKRTGLSVLLTGLTNVIAFFAASIIPIPALR 374
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F +Q I++LFN+ +LL++PA+
Sbjct: 375 TFCMQAGIVLLFNLAAMLLIFPAM 398
>gi|307181007|gb|EFN68781.1| Protein patched [Camponotus floridanus]
Length = 1207
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 61/84 (72%), Gaps = 4/84 (4%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
MFL+T T+A+ + + V E TG+VL++TGLS++L+ + AFF+A++IPIPALR
Sbjct: 411 MFLLTHTYAELS----VNEVPSGEQTGVVLKRTGLSVLLTGLSNVSAFFAAAIIPIPALR 466
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F LQ IL+LFN+ +LL++PA+
Sbjct: 467 TFCLQTGILLLFNLAAMLLIFPAM 490
>gi|405959641|gb|EKC25654.1| patched-like protein 1 [Crassostrea gigas]
Length = 1162
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ T+ + ++ D N+ T L++TG+S+ L+SV +AF SAS+IPIPALR
Sbjct: 486 IFLMAHTYGENSANKHID---FNDQTAECLKRTGVSVFLTSVTNILAFLSASIIPIPALR 542
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ +ILI FN+F +LL+YPAI
Sbjct: 543 AFSLQASILIFFNLFSVLLIYPAI 566
>gi|322790929|gb|EFZ15595.1| hypothetical protein SINV_80439 [Solenopsis invicta]
Length = 952
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 61/84 (72%), Gaps = 4/84 (4%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
MFL+T T+A+ + + V +E TG+VL++ GLS++L+ + FF+A++IPIPALR
Sbjct: 184 MFLMTHTYAELS----INEVPNSEQTGVVLKRIGLSVLLTGLTNVATFFAAAIIPIPALR 239
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F +Q AI++LFN+ +LL++PA+
Sbjct: 240 TFCMQAAIVLLFNLAAMLLIFPAM 263
>gi|391347741|ref|XP_003748113.1| PREDICTED: protein patched-like [Metaseiulus occidentalis]
Length = 1305
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 93/189 (49%), Gaps = 36/189 (19%)
Query: 1 MFLITKTFAKYTSKNQFD-SVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPAL 59
+F +T T K N S++ E TG L++TG++I+LS+ +AFF+ASLIPIPAL
Sbjct: 507 IFQLTHTLNKIAESNDESFSLRFQEQTGECLKRTGVNIVLSNTATILAFFAASLIPIPAL 566
Query: 60 RVFNLQLAILILFNMFVLLLVYPAI---------------ECWVGSAAPKDQSL------ 98
RVF+LQ AIL+ F++ +L + PA+ C + ++ P ++L
Sbjct: 567 RVFSLQAAILLTFSLGSVLFLLPAVFSLDLQRRASRRLELLCCLKASEPNHETLDGRNDS 626
Query: 99 -----LGEDLMTSDEEEDEHT-----SSACKLKSYSEFSCRYLARQHARLITRPGVKMIV 148
G+ + DE + T C S S F+ +A L+ P V+ +
Sbjct: 627 ATELVTGQPVRVRDEAFVKPTVQRGIDDGCFGFSLSSFASDV----YAPLVHHPAVRTLA 682
Query: 149 VFGFIGVLI 157
V FIG+LI
Sbjct: 683 VLSFIGLLI 691
>gi|348500818|ref|XP_003437969.1| PREDICTED: protein patched homolog 1-like [Oreochromis niloticus]
Length = 1479
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 58/84 (69%), Gaps = 5/84 (5%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
MFL+ +F + S ++ E TG LR+TG S+ L+S+ +AFF A+L+PIPALR
Sbjct: 496 MFLLAHSFTETES-----NIPFKERTGDCLRRTGTSVALTSINNMIAFFMAALVPIPALR 550
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ AI+++FN ++LL++PAI
Sbjct: 551 AFSLQAAIVVVFNFAMVLLIFPAI 574
>gi|388240440|dbj|BAM15714.1| patched homolog 2, partial [Scyliorhinus torazame]
Length = 325
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 57/84 (67%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
MFL+ F T Q ++ + TG LR+TG S+ L+S+ +AFF A+LIPIPALR
Sbjct: 43 MFLLAHAF---TETGQNKNIPFKDRTGECLRRTGTSVALTSINNIIAFFMAALIPIPALR 99
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ AI+++FN ++LL++PAI
Sbjct: 100 AFSLQAAIVVVFNFAMVLLIFPAI 123
>gi|209981970|gb|ACJ05610.1| patched 2 [Scyliorhinus canicula]
Length = 385
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 57/84 (67%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
MFL+ F T Q ++ + TG LR+TG S+ L+S+ +AFF A+LIPIPALR
Sbjct: 97 MFLLAHAF---TETGQNKNIPFKDRTGECLRRTGTSVALTSINNIIAFFMAALIPIPALR 153
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ AI+++FN ++LL++PAI
Sbjct: 154 AFSLQAAIVVVFNFAMVLLIFPAI 177
>gi|410929689|ref|XP_003978232.1| PREDICTED: protein patched homolog 1-like [Takifugu rubripes]
Length = 1596
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 57/84 (67%), Gaps = 5/84 (5%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
MFL+ +F + S V + E TG LR++G S+ L+S+ AFF A+L+PIP LR
Sbjct: 493 MFLLAHSFRETGS-----DVPVEERTGSCLRRSGTSVALTSINNMTAFFMAALVPIPGLR 547
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
VF+LQ AI+++FN+ +LL++PAI
Sbjct: 548 VFSLQAAIVVVFNLVTVLLIFPAI 571
>gi|432916798|ref|XP_004079389.1| PREDICTED: protein patched homolog 1-like [Oryzias latipes]
Length = 1477
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 58/84 (69%), Gaps = 5/84 (5%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
MFL+ +F + + ++ E TG LR+TG S+ L+S+ +AFF A+L+PIPALR
Sbjct: 496 MFLLAHSFTESGT-----NIPFKERTGDCLRRTGTSVALTSINNMIAFFMAALVPIPALR 550
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ AI+++FN ++LL++PAI
Sbjct: 551 AFSLQAAIVVVFNFAMVLLIFPAI 574
>gi|18859285|ref|NP_571063.1| protein patched homolog 1 [Danio rerio]
gi|6225889|sp|Q98864.1|PTC1_DANRE RecName: Full=Protein patched homolog 1; Short=PTC1; Short=Patched
1
gi|1524010|emb|CAA67386.1| patched protein [Danio rerio]
Length = 1220
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 57/84 (67%), Gaps = 5/84 (5%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
MFL+ +F + S ++ E TG LR+TG S+ L+SV +AFF A+L+PIPALR
Sbjct: 498 MFLLGHSFTETRS-----NIPFKERTGDCLRRTGTSVALTSVNNMIAFFMAALVPIPALR 552
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN + LL++PAI
Sbjct: 553 AFSLQAAVVVVFNFAMALLIFPAI 576
>gi|147899864|ref|NP_001081438.1| patched 2 [Xenopus laevis]
gi|11463863|dbj|BAB18575.1| patched-2 [Xenopus laevis]
Length = 1413
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 58/84 (69%), Gaps = 5/84 (5%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
MFL+ F + TS+ S + TG LR+TG S+ L+S+ +AFF A+L+PIPALR
Sbjct: 496 MFLLAHAFTE-TSR----STPFKDRTGECLRRTGTSVTLTSINNMIAFFMAALVPIPALR 550
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL++PAI
Sbjct: 551 AFSLQAAVIVVFNFAMVLLIFPAI 574
>gi|363736594|ref|XP_422426.3| PREDICTED: protein patched homolog 1, partial [Gallus gallus]
Length = 1300
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 58/84 (69%), Gaps = 5/84 (5%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
MFL+ F + TS++ + E TG LR+TG S+ L+SV +AFF A+L+PIPALR
Sbjct: 417 MFLLAHAFTE-TSQH----IPFKERTGECLRRTGTSVALTSVSNMIAFFMAALVPIPALR 471
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++L ++PAI
Sbjct: 472 AFSLQAAVVVVFNFAMVLFIFPAI 495
>gi|15426026|gb|AAK97655.1|AF409095_1 patched 2 [Gallus gallus]
Length = 913
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 58/84 (69%), Gaps = 5/84 (5%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
MFL+ F + TS++ + E TG LR+TG S+ L+SV +AFF A+L+PIPALR
Sbjct: 467 MFLLAHAFTE-TSQH----IPFKERTGECLRRTGTSVALTSVSNMIAFFMAALVPIPALR 521
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++L ++PAI
Sbjct: 522 AFSLQAAVVVVFNFAMVLFIFPAI 545
>gi|312434794|gb|ADQ74916.1| patched 2 [Callorhinchus milii]
Length = 281
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 56/84 (66%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
MFL+ F T Q ++ E TG LR+TG S+ L+S+ +AF A+LIPIPALR
Sbjct: 10 MFLLAHAF---TETGQNTNIPFKERTGECLRRTGTSVALTSINNMIAFSMAALIPIPALR 66
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ AI+++FN ++LL++PAI
Sbjct: 67 AFSLQAAIVVVFNFAMVLLIFPAI 90
>gi|402898080|ref|XP_003912060.1| PREDICTED: LOW QUALITY PROTEIN: protein patched homolog 1 [Papio
anubis]
Length = 1822
Score = 75.5 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 887 VFLLAHAFSE-TGQNK--RIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 943
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL++PAI
Sbjct: 944 AFSLQAAVVVVFNFAMVLLIFPAI 967
>gi|348517332|ref|XP_003446188.1| PREDICTED: protein patched homolog 1-like [Oreochromis niloticus]
Length = 1512
Score = 75.5 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 505 VFLLAHAFSE-TGQNK--RIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 561
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL++PAI
Sbjct: 562 AFSLQAAVVVVFNFAMVLLIFPAI 585
>gi|301615341|ref|XP_002937129.1| PREDICTED: protein patched homolog 1-like [Xenopus (Silurana)
tropicalis]
Length = 1423
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 56/84 (66%), Gaps = 5/84 (5%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
MFL+ F + + F E TG LR+TG S+ L+S+ +AFF A+L+PIPALR
Sbjct: 496 MFLLAHAFTETSLSTPF-----KERTGECLRRTGTSVALTSINNMIAFFMAALVPIPALR 550
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL++PAI
Sbjct: 551 AFSLQAAVVVVFNFAMVLLIFPAI 574
>gi|209969720|ref|NP_001129638.1| patched 2 [Xenopus laevis]
gi|47506910|gb|AAH70995.1| Unknown (protein for MGC:79874) [Xenopus laevis]
Length = 1422
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 56/84 (66%), Gaps = 5/84 (5%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
MFL+ F + + F E TG LR+TG S+ L+S+ +AFF A+L+PIPALR
Sbjct: 496 MFLLAHAFTETSLSTPF-----KERTGECLRRTGTSVALTSINNMIAFFMAALVPIPALR 550
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL++PAI
Sbjct: 551 AFSLQAAVVVVFNFAMVLLIFPAI 574
>gi|158297736|ref|XP_317925.4| AGAP011395-PA [Anopheles gambiae str. PEST]
gi|157014720|gb|EAA13037.4| AGAP011395-PA [Anopheles gambiae str. PEST]
Length = 1241
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 82/159 (51%), Gaps = 22/159 (13%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++T +A+ + Q TG VL+K GLS++ + + +FF+A+LIP+PALR
Sbjct: 458 IFVLTHAYAERDTSEQ---------TGQVLKKAGLSVLFAGASTAGSFFAATLIPVPALR 508
Query: 61 VFNLQLAILILFNMFVLLLVYPAIECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACKL 120
VF Q AIL +FN+ +LLV+PA+ D + H C+
Sbjct: 509 VFCFQGAILTVFNLAAVLLVFPAM-------ISLDLRRRRSGRADRNATRKRHIE--CQS 559
Query: 121 KSYSEFS-CRYLARQHARLITRPGVK---MIVVFGFIGV 155
KS FS R+ + +A ITR VK M+++ G +GV
Sbjct: 560 KSCLSFSLSRFAIKHYAPFITRSSVKVFGMLLLSGILGV 598
>gi|327271073|ref|XP_003220312.1| PREDICTED: protein patched homolog 1-like [Anolis carolinensis]
Length = 1379
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 59/84 (70%), Gaps = 5/84 (5%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
MFL+ F + TS++ V + E TG LR++G S+ L+SV +AFF A+L+PIPALR
Sbjct: 492 MFLLAHAFTE-TSQH----VPIKERTGECLRRSGTSVALTSVNNMIAFFMAALVPIPALR 546
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++L ++PAI
Sbjct: 547 AFSLQAAVVVVFNFAMVLFIFPAI 570
>gi|4539024|emb|CAB39726.1| patched-2 protein [Danio rerio]
Length = 1243
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 60/84 (71%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + TG L++TG S++L+S+ AFF A+LIPIPALR
Sbjct: 504 VFLLAHAFSE-TGQNK--RIPFEDRTGECLKRTGASVVLTSISNVTAFFMAALIPIPALR 560
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL++PAI
Sbjct: 561 AFSLQAAVVVVFNFAMVLLIFPAI 584
>gi|157132360|ref|XP_001656017.1| patched 1, putative [Aedes aegypti]
gi|108881712|gb|EAT45937.1| AAEL002850-PA, partial [Aedes aegypti]
Length = 1116
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 89/177 (50%), Gaps = 35/177 (19%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++T +A+ + NE TG VL+K GLSI+ S + +FF+A++IP+PALR
Sbjct: 458 IFVLTHAYAERDN---------NEQTGQVLKKAGLSILFSGASTAGSFFAAAMIPVPALR 508
Query: 61 VFNLQLAILILFNMFVLLLVYPA---------------IECWVGSAAPKDQSLLGEDLMT 105
VF Q A+L++FN+ +LLV+PA I C A P D+
Sbjct: 509 VFCFQGAVLLVFNLAAVLLVFPAMVSLDLRRRRAGRADILCCCLPALPTTN----HDVKQ 564
Query: 106 SDEEEDEHTSSA---CKLKSYSEFS-CRYLARQHARLITRPGVK---MIVVFGFIGV 155
+ + + + C K+ FS ++ + +A IT+ +K M+++ G IGV
Sbjct: 565 RQQHQTANADDSLIDCPTKACFSFSISKFAVKHYAPFITKSSIKVLSMLLLTGIIGV 621
>gi|122056667|gb|ABM66099.1| patched 2 [Leucoraja erinacea]
Length = 386
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 56/84 (66%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
MFL+ F T Q ++ + TG LR+TG S+ L+S+ +AF A+LIPIPALR
Sbjct: 97 MFLLAHAF---TETGQNKNIPFKDRTGECLRRTGTSVALTSINNMIAFSMAALIPIPALR 153
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ AI+++FN ++LL++PAI
Sbjct: 154 AFSLQAAIVVVFNFAMVLLIFPAI 177
>gi|410922870|ref|XP_003974905.1| PREDICTED: protein patched homolog 1-like [Takifugu rubripes]
Length = 1500
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 505 VFLLAHAFSE-TGQNK--RIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 561
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL++PAI
Sbjct: 562 AFSLQAAVVVVFNFAMVLLIFPAI 585
>gi|291383497|ref|XP_002708306.1| PREDICTED: patched-like [Oryctolagus cuniculus]
Length = 1392
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 454 VFLLAHAFSE-TGQNK--RIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 510
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL++PAI
Sbjct: 511 AFSLQAAVVVVFNFAMVLLIFPAI 534
>gi|395740704|ref|XP_002820037.2| PREDICTED: LOW QUALITY PROTEIN: protein patched homolog 1 [Pongo
abelii]
Length = 1866
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 950 VFLLAHAFSE-TGQNK--RIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 1006
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL++PAI
Sbjct: 1007 AFSLQAAVVVVFNFAMVLLIFPAI 1030
>gi|326670152|ref|XP_001922161.3| PREDICTED: protein patched homolog 1 [Danio rerio]
Length = 1475
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 504 VFLLAHAFSE-TGQNK--RIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 560
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL++PAI
Sbjct: 561 AFSLQAAVVVVFNFAMVLLIFPAI 584
>gi|334332725|ref|XP_001368370.2| PREDICTED: protein patched homolog 1 [Monodelphis domestica]
Length = 1449
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 517 VFLLAHAFSE-TGQNK--RIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 573
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ AI+++FN ++LL++PAI
Sbjct: 574 AFSLQAAIVVVFNFAMVLLIFPAI 597
>gi|395514302|ref|XP_003761358.1| PREDICTED: protein patched homolog 1, partial [Sarcophilus
harrisii]
Length = 1423
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 491 VFLLAHAFSE-TGQNK--RIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 547
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ AI+++FN ++LL++PAI
Sbjct: 548 AFSLQAAIVVVFNFAMVLLIFPAI 571
>gi|332832420|ref|XP_003312241.1| PREDICTED: protein patched homolog 1 [Pan troglodytes]
Length = 1526
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 627 VFLLAHAFSE-TGQNK--RIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 683
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL++PAI
Sbjct: 684 AFSLQAAVVVVFNFAMVLLIFPAI 707
>gi|431897841|gb|ELK06675.1| Protein patched like protein 1, partial [Pteropus alecto]
Length = 1352
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 480 VFLLAHAFSE-TGQNK--RIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 536
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL++PAI
Sbjct: 537 AFSLQAAVVVVFNFAMVLLIFPAI 560
>gi|354505525|ref|XP_003514818.1| PREDICTED: protein patched homolog 1-like [Cricetulus griseus]
Length = 1570
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 637 VFLLAHAFSE-TGQNK--RIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 693
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL++PAI
Sbjct: 694 AFSLQAAVVVVFNFAMVLLIFPAI 717
>gi|297271405|ref|XP_001111868.2| PREDICTED: protein patched homolog 1-like [Macaca mulatta]
Length = 1551
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 650 VFLLAHAFSE-TGQNK--RIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 706
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL++PAI
Sbjct: 707 AFSLQAAVVVVFNFAMVLLIFPAI 730
>gi|351702040|gb|EHB04959.1| patched-like protein 1 [Heterocephalus glaber]
Length = 1461
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 546 VFLLAHAFSE-TGQNK--RIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 602
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL++PAI
Sbjct: 603 AFSLQAAVVVVFNFAMVLLIFPAI 626
>gi|355753482|gb|EHH57528.1| Protein patched-like protein 1 [Macaca fascicularis]
Length = 1384
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 406 VFLLAHAFSE-TGQNK--RIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 462
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL++PAI
Sbjct: 463 AFSLQAAVVVVFNFAMVLLIFPAI 486
>gi|301610987|ref|XP_002935019.1| PREDICTED: protein patched homolog 1-like [Xenopus (Silurana)
tropicalis]
Length = 1436
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 509 VFLLAHAFSE-TGQNK--RIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 565
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL++PAI
Sbjct: 566 AFSLQAAVVVVFNFAMVLLIFPAI 589
>gi|224088714|ref|XP_002194217.1| PREDICTED: protein patched homolog 1 [Taeniopygia guttata]
Length = 1443
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 515 VFLLAHAFSE-TGQNK--RIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 571
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL++PAI
Sbjct: 572 AFSLQAAVVVVFNFAMVLLIFPAI 595
>gi|449278269|gb|EMC86175.1| Protein patched like protein 1, partial [Columba livia]
Length = 1311
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 384 VFLLAHAFSE-TGQNK--RIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 440
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL++PAI
Sbjct: 441 AFSLQAAVVVVFNFAMVLLIFPAI 464
>gi|119613038|gb|EAW92632.1| patched homolog (Drosophila), isoform CRA_b [Homo sapiens]
Length = 1395
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 463 VFLLAHAFSE-TGQNK--RIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 519
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL++PAI
Sbjct: 520 AFSLQAAVVVVFNFAMVLLIFPAI 543
>gi|350589425|ref|XP_003482848.1| PREDICTED: protein patched homolog 1 isoform 2 [Sus scrofa]
Length = 1452
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 517 VFLLAHAFSE-TGQNK--RIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 573
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL++PAI
Sbjct: 574 AFSLQAAVVVVFNFAMVLLIFPAI 597
>gi|344254558|gb|EGW10662.1| Protein patched-like 1 [Cricetulus griseus]
Length = 1114
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 181 VFLLAHAFSE-TGQNK--RIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 237
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL++PAI
Sbjct: 238 AFSLQAAVVVVFNFAMVLLIFPAI 261
>gi|329663677|ref|NP_001192808.1| protein patched homolog 1 [Bos taurus]
gi|296484488|tpg|DAA26603.1| TPA: patched homolog 1 [Bos taurus]
Length = 1453
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 514 VFLLAHAFSE-TGQNK--RIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 570
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL++PAI
Sbjct: 571 AFSLQAAVVVVFNFAMVLLIFPAI 594
>gi|1381236|gb|AAC50550.1| PATCHED [Homo sapiens]
Length = 1447
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 515 VFLLAHAFSE-TGQNK--RIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 571
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL++PAI
Sbjct: 572 AFSLQAAVVVVFNFAMVLLIFPAI 595
>gi|148226978|ref|NP_001082082.1| patched 1 [Xenopus laevis]
gi|13194564|gb|AAK15463.1|AF302765_1 patched-1 [Xenopus laevis]
Length = 1418
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 505 VFLLAHAFSE-TGQNK--RIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 561
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL++PAI
Sbjct: 562 AFSLQAAVVVVFNFAMVLLIFPAI 585
>gi|332222817|ref|XP_003260566.1| PREDICTED: protein patched homolog 1 isoform 1 [Nomascus
leucogenys]
Length = 1446
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 515 VFLLAHAFSE-TGQNK--RIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 571
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL++PAI
Sbjct: 572 AFSLQAAVVVVFNFAMVLLIFPAI 595
>gi|194224692|ref|XP_001494739.2| PREDICTED: protein patched homolog 1 [Equus caballus]
Length = 1395
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 458 VFLLAHAFSE-TGQNK--RIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 514
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL++PAI
Sbjct: 515 AFSLQAAVVVVFNFAMVLLIFPAI 538
>gi|134254446|ref|NP_000255.2| protein patched homolog 1 isoform L [Homo sapiens]
gi|160415977|sp|Q13635.2|PTC1_HUMAN RecName: Full=Protein patched homolog 1; Short=PTC; Short=PTC1
gi|119613037|gb|EAW92631.1| patched homolog (Drosophila), isoform CRA_a [Homo sapiens]
gi|157169626|gb|AAI52920.1| Patched homolog 1 (Drosophila) [synthetic construct]
gi|261857968|dbj|BAI45506.1| patched homolog 1 [synthetic construct]
Length = 1447
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 515 VFLLAHAFSE-TGQNK--RIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 571
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL++PAI
Sbjct: 572 AFSLQAAVVVVFNFAMVLLIFPAI 595
>gi|355567954|gb|EHH24295.1| Protein patched-like protein 1, partial [Macaca mulatta]
Length = 1321
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 386 VFLLAHAFSE-TGQNK--RIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 442
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL++PAI
Sbjct: 443 AFSLQAAVVVVFNFAMVLLIFPAI 466
>gi|432873725|ref|XP_004072359.1| PREDICTED: protein patched homolog 1-like [Oryzias latipes]
Length = 1357
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 502 VFLLAHAFSE-TGQNK--RIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 558
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL++PAI
Sbjct: 559 AFSLQAAVVVVFNFAMVLLIFPAI 582
>gi|343791233|gb|AEM61157.1| patched 1 [Labeotropheus trewavasae]
gi|343791235|gb|AEM61158.1| patched 1 [Maylandia zebra]
Length = 908
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 504 VFLLAHAFSE-TGQNK--RIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 560
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL++PAI
Sbjct: 561 AFSLQAAVVVVFNFAMVLLIFPAI 584
>gi|6679519|ref|NP_032983.1| protein patched homolog 1 [Mus musculus]
gi|6225892|sp|Q61115.1|PTC1_MOUSE RecName: Full=Protein patched homolog 1; Short=PTC; Short=PTC1
gi|1181885|gb|AAC98798.1| patched [Mus musculus]
gi|148684273|gb|EDL16220.1| patched homolog 1 [Mus musculus]
gi|162318750|gb|AAI57046.1| Patched homolog 1 [synthetic construct]
gi|162319522|gb|AAI56083.1| Patched homolog 1 [synthetic construct]
Length = 1434
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 501 VFLLAHAFSE-TGQNK--RIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 557
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL++PAI
Sbjct: 558 AFSLQAAVVVVFNFAMVLLIFPAI 581
>gi|350589429|ref|XP_003482849.1| PREDICTED: protein patched homolog 1 isoform 3 [Sus scrofa]
Length = 1299
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 364 VFLLAHAFSE-TGQNK--RIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 420
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL++PAI
Sbjct: 421 AFSLQAAVVVVFNFAMVLLIFPAI 444
>gi|344271165|ref|XP_003407412.1| PREDICTED: protein patched homolog 1 [Loxodonta africana]
Length = 1412
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 475 VFLLAHAFSE-TGQNK--RIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 531
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL++PAI
Sbjct: 532 AFSLQAAVVVVFNFAMVLLIFPAI 555
>gi|1335864|gb|AAC50496.1| patched gene homolog; similar to Drosophila patched protein,
Swiss-Prot Accession Number P18502; transmembrane
protein; Method: conceptual translation supplied by
author [Homo sapiens]
Length = 1296
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 364 VFLLAHAFSE-TGQNK--RIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 420
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL++PAI
Sbjct: 421 AFSLQAAVVVVFNFAMVLLIFPAI 444
>gi|395819337|ref|XP_003783050.1| PREDICTED: protein patched homolog 1 isoform 4 [Otolemur garnettii]
Length = 1447
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 512 VFLLAHAFSE-TGQNK--RIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 568
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL++PAI
Sbjct: 569 AFSLQAAVVVVFNFAMVLLIFPAI 592
>gi|134254432|ref|NP_001077072.1| protein patched homolog 1 isoform L' [Homo sapiens]
Length = 1446
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 514 VFLLAHAFSE-TGQNK--RIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 570
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL++PAI
Sbjct: 571 AFSLQAAVVVVFNFAMVLLIFPAI 594
>gi|134254435|ref|NP_001077075.1| protein patched homolog 1 isoform S [Homo sapiens]
gi|134254450|ref|NP_001077076.1| protein patched homolog 1 isoform S [Homo sapiens]
gi|134254452|ref|NP_001077073.1| protein patched homolog 1 isoform S [Homo sapiens]
gi|134254468|ref|NP_001077074.1| protein patched homolog 1 isoform S [Homo sapiens]
Length = 1296
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 364 VFLLAHAFSE-TGQNK--RIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 420
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL++PAI
Sbjct: 421 AFSLQAAVVVVFNFAMVLLIFPAI 444
>gi|397479828|ref|XP_003811206.1| PREDICTED: protein patched homolog 1 isoform 3 [Pan paniscus]
gi|397479830|ref|XP_003811207.1| PREDICTED: protein patched homolog 1 isoform 4 [Pan paniscus]
gi|397479832|ref|XP_003811208.1| PREDICTED: protein patched homolog 1 isoform 5 [Pan paniscus]
gi|397479834|ref|XP_003811209.1| PREDICTED: protein patched homolog 1 isoform 6 [Pan paniscus]
Length = 1296
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 364 VFLLAHAFSE-TGQNK--RIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 420
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL++PAI
Sbjct: 421 AFSLQAAVVVVFNFAMVLLIFPAI 444
>gi|397479824|ref|XP_003811204.1| PREDICTED: protein patched homolog 1 isoform 1 [Pan paniscus]
Length = 1446
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 514 VFLLAHAFSE-TGQNK--RIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 570
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL++PAI
Sbjct: 571 AFSLQAAVVVVFNFAMVLLIFPAI 594
>gi|395819331|ref|XP_003783047.1| PREDICTED: protein patched homolog 1 isoform 1 [Otolemur garnettii]
gi|395819333|ref|XP_003783048.1| PREDICTED: protein patched homolog 1 isoform 2 [Otolemur garnettii]
gi|395819339|ref|XP_003783051.1| PREDICTED: protein patched homolog 1 isoform 5 [Otolemur garnettii]
Length = 1299
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 364 VFLLAHAFSE-TGQNK--RIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 420
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL++PAI
Sbjct: 421 AFSLQAAVVVVFNFAMVLLIFPAI 444
>gi|444516039|gb|ELV11037.1| Protein patched like protein 1 [Tupaia chinensis]
Length = 1669
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 737 VFLLAHAFSE-TGQNK--RIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 793
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL++PAI
Sbjct: 794 AFSLQAAVVVVFNFAMVLLIFPAI 817
>gi|76559766|dbj|BAE45302.1| PTCH protein -10 [Homo sapiens]
Length = 348
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 176 VFLLAHAFSE-TGQNK--RIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 232
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL++PAI
Sbjct: 233 AFSLQAAVVVVFNFAMVLLIFPAI 256
>gi|39930495|ref|NP_446018.1| protein patched homolog 1 [Rattus norvegicus]
gi|34421001|gb|AAQ67738.1| patched [Rattus norvegicus]
Length = 1434
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 501 VFLLAHAFSE-TGQNK--RIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 557
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL++PAI
Sbjct: 558 AFSLQAAVVVVFNFAMVLLIFPAI 581
>gi|4092050|gb|AAC99398.1| patched [Rattus norvegicus]
Length = 608
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 60/84 (71%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 501 VFLLAHAFSE-TGQNK--RIPIEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 557
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL++PAI
Sbjct: 558 AFSLQAAVVVVFNFAMVLLIFPAI 581
>gi|410978249|ref|XP_003995508.1| PREDICTED: protein patched homolog 1 [Felis catus]
Length = 1301
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 364 VFLLAHAFSE-TGQNK--RIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 420
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL++PAI
Sbjct: 421 AFSLQAAVVVVFNFAMVLLIFPAI 444
>gi|403294591|ref|XP_003938259.1| PREDICTED: protein patched homolog 1 [Saimiri boliviensis
boliviensis]
Length = 1531
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 596 VFLLAHAFSE-TGQNK--RIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 652
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL++PAI
Sbjct: 653 AFSLQAAVVVVFNFAMVLLIFPAI 676
>gi|440906007|gb|ELR56321.1| Protein patched-like protein 1, partial [Bos grunniens mutus]
Length = 1388
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 449 VFLLAHAFSE-TGQNK--RIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 505
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL++PAI
Sbjct: 506 AFSLQAAVVVVFNFAMVLLIFPAI 529
>gi|395819341|ref|XP_003783052.1| PREDICTED: protein patched homolog 1 isoform 6 [Otolemur garnettii]
Length = 1384
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 449 VFLLAHAFSE-TGQNK--RIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 505
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL++PAI
Sbjct: 506 AFSLQAAVVVVFNFAMVLLIFPAI 529
>gi|384948420|gb|AFI37815.1| protein patched homolog 1 isoform M [Macaca mulatta]
Length = 1384
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 449 VFLLAHAFSE-TGQNK--RIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 505
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL++PAI
Sbjct: 506 AFSLQAAVVVVFNFAMVLLIFPAI 529
>gi|332222819|ref|XP_003260567.1| PREDICTED: protein patched homolog 1 isoform 2 [Nomascus
leucogenys]
gi|332222821|ref|XP_003260568.1| PREDICTED: protein patched homolog 1 isoform 3 [Nomascus
leucogenys]
gi|332222823|ref|XP_003260569.1| PREDICTED: protein patched homolog 1 isoform 4 [Nomascus
leucogenys]
Length = 1295
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 364 VFLLAHAFSE-TGQNK--RIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 420
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL++PAI
Sbjct: 421 AFSLQAAVVVVFNFAMVLLIFPAI 444
>gi|350589427|ref|XP_003357747.2| PREDICTED: protein patched homolog 1 isoform 1 [Sus scrofa]
Length = 1446
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 511 VFLLAHAFSE-TGQNK--RIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 567
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL++PAI
Sbjct: 568 AFSLQAAVVVVFNFAMVLLIFPAI 591
>gi|348565318|ref|XP_003468450.1| PREDICTED: protein patched homolog 1-like [Cavia porcellus]
Length = 1597
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 667 VFLLAHAFSE-TGQNK--RIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 723
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL++PAI
Sbjct: 724 AFSLQAAVVVVFNFAMVLLIFPAI 747
>gi|296189483|ref|XP_002742792.1| PREDICTED: protein patched homolog 1 [Callithrix jacchus]
Length = 1450
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 515 VFLLAHAFSE-TGQNK--RIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 571
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL++PAI
Sbjct: 572 AFSLQAAVVVVFNFAMVLLIFPAI 595
>gi|397479826|ref|XP_003811205.1| PREDICTED: protein patched homolog 1 isoform 2 [Pan paniscus]
Length = 1381
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 449 VFLLAHAFSE-TGQNK--RIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 505
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL++PAI
Sbjct: 506 AFSLQAAVVVVFNFAMVLLIFPAI 529
>gi|359318849|ref|XP_003638919.1| PREDICTED: LOW QUALITY PROTEIN: protein patched homolog 1 [Canis
lupus familiaris]
Length = 1450
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 513 VFLLAHAFSE-TGQNK--RIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 569
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL++PAI
Sbjct: 570 AFSLQAAVVVVFNFAMVLLIFPAI 593
>gi|134254466|ref|NP_001077071.1| protein patched homolog 1 isoform M [Homo sapiens]
Length = 1381
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 449 VFLLAHAFSE-TGQNK--RIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 505
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL++PAI
Sbjct: 506 AFSLQAAVVVVFNFAMVLLIFPAI 529
>gi|45384440|ref|NP_990291.1| protein patched homolog 1 [Gallus gallus]
gi|6225890|sp|Q90693.1|PTC1_CHICK RecName: Full=Protein patched homolog 1; Short=PTC; Short=PTC1
gi|1335851|gb|AAC59898.1| patched protein [Gallus gallus]
Length = 1442
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 515 VFLLAHAFSE-TGQNK--RIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 571
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL++PAI
Sbjct: 572 AFSLQAAVVVVFNFAMVLLIFPAI 595
>gi|327263383|ref|XP_003216499.1| PREDICTED: LOW QUALITY PROTEIN: protein patched homolog 1-like
[Anolis carolinensis]
Length = 1464
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 533 VFLLAHAFSE-TGQNK--RIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 589
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL++PAI
Sbjct: 590 AFSLQAAVVVVFNFAMVLLIFPAI 613
>gi|426219865|ref|XP_004004138.1| PREDICTED: LOW QUALITY PROTEIN: protein patched homolog 1 [Ovis
aries]
Length = 1449
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 512 VFLLAHAFSE-TGQNK--RIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 568
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL++PAI
Sbjct: 569 AFSLQAAVVVVFNFAMVLLIFPAI 592
>gi|449266414|gb|EMC77467.1| Protein patched like protein 1, partial [Columba livia]
Length = 786
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 58/84 (69%), Gaps = 5/84 (5%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
MFL+ F + TS++ + E TG L++TG S+ L+S+ +AFF A+L+PIPALR
Sbjct: 113 MFLLAHAFTE-TSQH----IPFKERTGECLKRTGTSVALTSISNMIAFFMAALVPIPALR 167
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++L V+PAI
Sbjct: 168 AFSLQAAVVVVFNFAMVLFVFPAI 191
>gi|395819335|ref|XP_003783049.1| PREDICTED: protein patched homolog 1 isoform 3 [Otolemur garnettii]
Length = 1448
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 513 VFLLAHAFSE-TGQNK--RIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 569
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL++PAI
Sbjct: 570 AFSLQAAVVVVFNFAMVLLIFPAI 593
>gi|281346359|gb|EFB21943.1| hypothetical protein PANDA_009095 [Ailuropoda melanoleuca]
Length = 1386
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 449 VFLLAHAFSE-TGQNK--RIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 505
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL++PAI
Sbjct: 506 AFSLQAAVVVVFNFAMVLLIFPAI 529
>gi|301769903|ref|XP_002920366.1| PREDICTED: protein patched homolog 1-like [Ailuropoda melanoleuca]
Length = 1448
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 511 VFLLAHAFSE-TGQNK--RIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 567
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL++PAI
Sbjct: 568 AFSLQAAVVVVFNFAMVLLIFPAI 591
>gi|149029134|gb|EDL84419.1| patched homolog 1 (Drosophila), isoform CRA_a [Rattus norvegicus]
Length = 891
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 501 VFLLAHAFSE-TGQNK--RIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 557
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL++PAI
Sbjct: 558 AFSLQAAVVVVFNFAMVLLIFPAI 581
>gi|13434992|dbj|BAB18574.2| patched-1 [Xenopus laevis]
Length = 1239
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 505 VFLLAHAFSE-TGQNK--RIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 561
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL++PAI
Sbjct: 562 AFSLQAAVVVVFNFAMVLLIFPAI 585
>gi|388240438|dbj|BAM15713.1| patched homolog 1, partial [Scyliorhinus torazame]
Length = 456
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 58/84 (69%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T N+ + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 6 VFLLAHAFSE-TGHNK--KIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 62
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL++PAI
Sbjct: 63 AFSLQAAVVVVFNFAMVLLIFPAI 86
>gi|432117565|gb|ELK37804.1| Protein patched like protein 1 [Myotis davidii]
Length = 1038
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 489 VFLLAHAFSE-TGQNK--RIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 545
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL++PAI
Sbjct: 546 AFSLQAAVVVVFNFAMVLLIFPAI 569
>gi|58429981|gb|AAW78359.1| patched-1, partial [Ambystoma mexicanum]
Length = 493
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 390 VFLLAHAFSE-TGQNK--RIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 446
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL++PAI
Sbjct: 447 AFSLQAAVVVVFNFAMVLLIFPAI 470
>gi|390334730|ref|XP_798472.3| PREDICTED: protein patched homolog 1-like [Strongylocentrotus
purpuratus]
Length = 1409
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 55/84 (65%), Gaps = 5/84 (5%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
MFL+ T S+ + L + TG +LR+ G+S+IL+SV AF +A++IPIPALR
Sbjct: 503 MFLLAHTSTSLPSE-----IPLRQKTGEILRRAGVSVILTSVNNICAFLAAAIIPIPALR 557
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
QL I++ FN+ V+LLV+PAI
Sbjct: 558 SLAFQLVIVLTFNLLVMLLVFPAI 581
>gi|321479419|gb|EFX90375.1| putative hedgehog receptor patched [Daphnia pulex]
Length = 1285
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/194 (32%), Positives = 100/194 (51%), Gaps = 41/194 (21%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
MFL+T T+A+ + Q+ + ++ TG +L+++G+SI+LSSV + AFF+A++IPIPALR
Sbjct: 505 MFLLTHTYAQ-SWDQQYR--RHDDHTGQILKRSGVSILLSSVSNACAFFAAAIIPIPALR 561
Query: 61 VFNLQLAILILFNMFVLLLVYPAIE----------------CWVGSA------APKDQSL 98
F+LQ IL+LFN+ LLLV+PAI C G A A
Sbjct: 562 AFSLQAGILVLFNLATLLLVFPAIMSLDMKRRVANRVDLLCCLAGKAPATVVGASTTAQP 621
Query: 99 LGEDLMTSDEEED------------EHTSSACKLKSYSEFSCRYLARQHARLITRPGVKM 146
G ++ D E D + C+ + S+F+ + RL+ + VK+
Sbjct: 622 QGVNVEAGDSETDPALDPLLHYVPPSGQTVECQTWTLSKFA----RHSYGRLLLKTPVKV 677
Query: 147 IVVFGFIGVLIASV 160
+ + FI +L ASV
Sbjct: 678 LGMVAFIVLLAASV 691
>gi|115521863|gb|ABJ09405.1| patched protein [Lytechinus variegatus]
Length = 1416
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 54/84 (64%), Gaps = 5/84 (5%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
MFL+ T S+ + L TG +LR+ G+SIIL+SV AF +A++IPIPALR
Sbjct: 504 MFLLAHTSTSIPSE-----IPLRHKTGEILRRAGVSIILTSVNNICAFMAAAIIPIPALR 558
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
QL I++ FN+ V+LLV+PAI
Sbjct: 559 SLAFQLVIVLTFNLLVMLLVFPAI 582
>gi|359386803|gb|AEV44491.1| PTCH1 [Macropus eugenii]
Length = 1450
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 51/74 (68%)
Query: 11 YTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILI 70
++ Q + + TG L++TG S+ L+S+ AFF A+LIPIPALR F+LQ AI++
Sbjct: 525 FSETGQNKRIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALRAFSLQAAIVV 584
Query: 71 LFNMFVLLLVYPAI 84
+FN ++LL++PAI
Sbjct: 585 VFNFAMVLLIFPAI 598
>gi|38489135|gb|AAR21239.1| patched [Homo sapiens]
Length = 651
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 110 VFLLAHAFSE-TGQNK--RIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 166
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL++PAI
Sbjct: 167 AFSLQAAVVLVFNFAMVLLIFPAI 190
>gi|85719143|dbj|BAE78534.1| patched [Meriones unguiculatus]
Length = 1434
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 58/84 (69%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 501 VFLLAHAFSE-TGQNK--RIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 557
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL+ PAI
Sbjct: 558 AFSLQAAVVVVFNFAMVLLILPAI 581
>gi|74210731|dbj|BAE23693.1| unnamed protein product [Mus musculus]
Length = 247
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 59/84 (70%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 115 VFLLAHAFSE-TGQNK--RIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 171
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A++++FN ++LL++PAI
Sbjct: 172 AFSLQAAVVVVFNFAMVLLIFPAI 195
>gi|395530324|ref|XP_003767246.1| PREDICTED: protein patched homolog 2 [Sarcophilus harrisii]
Length = 1622
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/84 (44%), Positives = 53/84 (63%), Gaps = 5/84 (5%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
MFL+ F + S L E TG L++ G S++L+SV VAFF A+L+PIPALR
Sbjct: 590 MFLLAHAFTEAPS-----GTPLQERTGECLQRMGTSVVLTSVNNLVAFFMAALVPIPALR 644
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A+++ N +LL++PAI
Sbjct: 645 AFSLQAAVVVGCNFAAVLLIFPAI 668
>gi|359386805|gb|AEV44492.1| PTCH2 [Macropus eugenii]
Length = 1251
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/84 (44%), Positives = 53/84 (63%), Gaps = 5/84 (5%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
MFL+ F + S + L E TG L++ G S+ L+SV VAFF A+L+PIPALR
Sbjct: 457 MFLLAHAFTEAPS-----GIPLQERTGECLQRMGTSVALTSVNNLVAFFMAALVPIPALR 511
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A+++ N +LL++PAI
Sbjct: 512 AFSLQAAVVVSCNFTAVLLIFPAI 535
>gi|348552266|ref|XP_003461949.1| PREDICTED: protein patched homolog 2-like [Cavia porcellus]
Length = 1207
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/84 (44%), Positives = 54/84 (64%), Gaps = 5/84 (5%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ +F K S L E G L++TG S+ L+SV VAFFSA+L+PIPALR
Sbjct: 471 VFLLAHSFTKAPL-----STPLQERMGECLQRTGTSVTLTSVSNMVAFFSAALVPIPALR 525
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A+++ N ++L++PAI
Sbjct: 526 AFSLQAAVVVGCNFAAVMLIFPAI 549
>gi|119890320|ref|XP_584648.3| PREDICTED: protein patched homolog 2 [Bos taurus]
gi|297473253|ref|XP_002686477.1| PREDICTED: protein patched homolog 2 [Bos taurus]
gi|296488966|tpg|DAA31079.1| TPA: patched homolog 2 [Bos taurus]
Length = 1207
Score = 69.7 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 33/63 (52%), Positives = 46/63 (73%)
Query: 22 LNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVY 81
L E TG LR+TG S+ L+S+ VAFF A+L+PIPALR F+LQ AI++ N ++LV+
Sbjct: 487 LQERTGECLRRTGTSVTLTSINNMVAFFMAALVPIPALRAFSLQAAIVVGCNFAAVMLVF 546
Query: 82 PAI 84
PA+
Sbjct: 547 PAV 549
>gi|440907287|gb|ELR57447.1| Protein patched-like protein 2 [Bos grunniens mutus]
Length = 1207
Score = 69.7 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 33/63 (52%), Positives = 46/63 (73%)
Query: 22 LNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVY 81
L E TG LR+TG S+ L+S+ VAFF A+L+PIPALR F+LQ AI++ N ++LV+
Sbjct: 487 LQERTGECLRRTGTSVTLTSINNMVAFFMAALVPIPALRAFSLQAAIVVGCNFAAVMLVF 546
Query: 82 PAI 84
PA+
Sbjct: 547 PAV 549
>gi|410967130|ref|XP_003990075.1| PREDICTED: LOW QUALITY PROTEIN: protein patched homolog 2 [Felis
catus]
Length = 1207
Score = 68.9 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 33/63 (52%), Positives = 46/63 (73%)
Query: 22 LNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVY 81
L E TG LR+TG S+ L+S+ VAFF A+L+PIPALR F+LQ AI++ N ++LV+
Sbjct: 487 LQERTGECLRRTGTSVALTSINHMVAFFMAALVPIPALRAFSLQAAIVVGCNFAAVMLVF 546
Query: 82 PAI 84
PA+
Sbjct: 547 PAV 549
>gi|291239532|ref|XP_002739677.1| PREDICTED: patched 187 [Saccoglossus kowalevskii]
Length = 1385
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 57/84 (67%), Gaps = 5/84 (5%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
MFL+ T + S S+ + + TG +L+++G+S++L+S+ AFF A++IPIPALR
Sbjct: 527 MFLLAHTSSSLPS-----SIPVAQQTGEILKRSGMSVLLTSLNNMCAFFIAAVIPIPALR 581
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
+LQ AI+++FN ++ ++PAI
Sbjct: 582 TLSLQFAIIVVFNFVAVIFIFPAI 605
>gi|126305808|ref|XP_001376022.1| PREDICTED: protein patched homolog 2 [Monodelphis domestica]
Length = 871
Score = 68.6 bits (166), Expect = 8e-10, Method: Composition-based stats.
Identities = 36/84 (42%), Positives = 52/84 (61%), Gaps = 5/84 (5%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
MFL+ F + L E TG L++ G S++L+SV VAFF A+L+PIPALR
Sbjct: 458 MFLLAHAFTEAPP-----GTPLQERTGECLQRMGTSVVLTSVNNLVAFFMAALVPIPALR 512
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A+++ N +LL++PAI
Sbjct: 513 AFSLQAAVVVSCNFTAVLLIFPAI 536
>gi|170595444|ref|XP_001902385.1| Patched family protein [Brugia malayi]
gi|158589973|gb|EDP28766.1| Patched family protein [Brugia malayi]
Length = 1422
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 58/84 (69%), Gaps = 6/84 (7%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
MFL+ + K+ +VK NE GI++++TG+S++++S+ +AF + +L+PIPAL+
Sbjct: 657 MFLLLHNY-----KDVHHTVKNNEI-GILMKETGMSVVITSINNIIAFMAGTLLPIPALK 710
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F Q AIL+ FNM ++++YPA+
Sbjct: 711 SFCSQTAILLTFNMIAIMVIYPAM 734
>gi|395857729|ref|XP_003801237.1| PREDICTED: protein patched homolog 2 [Otolemur garnettii]
Length = 1206
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/63 (52%), Positives = 46/63 (73%)
Query: 22 LNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVY 81
L E TG LR+ G S+ L+S+ VAFF A+L+PIPALR F+LQ+AI++ N ++LV+
Sbjct: 487 LQERTGECLRRMGTSVALTSINNMVAFFMAALVPIPALRAFSLQVAIVVGCNFAAVMLVF 546
Query: 82 PAI 84
PAI
Sbjct: 547 PAI 549
>gi|149693711|ref|XP_001496607.1| PREDICTED: protein patched homolog 2 [Equus caballus]
Length = 1207
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/63 (52%), Positives = 46/63 (73%)
Query: 22 LNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVY 81
L E TG L++TG S+ L+SV VAFF A+L+PIPALR F+LQ AI++ N ++LV+
Sbjct: 487 LQERTGECLQRTGTSVTLTSVNNMVAFFMAALVPIPALRAFSLQAAIVVGCNFAAVMLVF 546
Query: 82 PAI 84
PA+
Sbjct: 547 PAV 549
>gi|301781911|ref|XP_002926372.1| PREDICTED: protein patched homolog 2-like [Ailuropoda melanoleuca]
Length = 1281
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/63 (52%), Positives = 46/63 (73%)
Query: 22 LNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVY 81
L E TG L++TG S+ L+S+ VAFF A+L+PIPALR F+LQ AI++ N +LLV+
Sbjct: 561 LQERTGECLQRTGTSVALTSINHMVAFFMAALVPIPALRAFSLQAAIVVGCNFAAVLLVF 620
Query: 82 PAI 84
PA+
Sbjct: 621 PAV 623
>gi|359321380|ref|XP_539636.3| PREDICTED: protein patched homolog 2 [Canis lupus familiaris]
Length = 1207
Score = 67.8 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/63 (50%), Positives = 46/63 (73%)
Query: 22 LNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVY 81
L E TG L++TG S+ L+S+ VAFF A+L+PIPALR F+LQ AI++ N ++LV+
Sbjct: 487 LQERTGECLQRTGTSVALTSISHMVAFFMAALVPIPALRAFSLQAAIVVGCNFAAVMLVF 546
Query: 82 PAI 84
PA+
Sbjct: 547 PAV 549
>gi|281337579|gb|EFB13163.1| hypothetical protein PANDA_016011 [Ailuropoda melanoleuca]
Length = 1204
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/63 (52%), Positives = 46/63 (73%)
Query: 22 LNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVY 81
L E TG L++TG S+ L+S+ VAFF A+L+PIPALR F+LQ AI++ N +LLV+
Sbjct: 484 LQERTGECLQRTGTSVALTSINHMVAFFMAALVPIPALRAFSLQAAIVVGCNFAAVLLVF 543
Query: 82 PAI 84
PA+
Sbjct: 544 PAV 546
>gi|444721426|gb|ELW62163.1| Protein patched like protein 2 [Tupaia chinensis]
Length = 1229
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/63 (50%), Positives = 46/63 (73%)
Query: 22 LNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVY 81
L E TG L++TG S+ L+S+ VAFF A+L+PIPALR F+LQ AI++ N ++LV+
Sbjct: 495 LQERTGECLQRTGTSVTLTSINNMVAFFMAALVPIPALRAFSLQAAIVVGCNFAAVMLVF 554
Query: 82 PAI 84
PA+
Sbjct: 555 PAV 557
>gi|6679517|ref|NP_032984.1| protein patched homolog 2 [Mus musculus]
gi|6225894|sp|O35595.2|PTC2_MOUSE RecName: Full=Protein patched homolog 2; Short=PTC2
gi|2842558|dbj|BAA24691.1| ptch2 [Mus musculus]
gi|18077853|emb|CAC88120.1| Patched 2 protein [Mus musculus]
gi|183396917|gb|AAI66018.1| Patched homolog 2 [synthetic construct]
Length = 1182
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/84 (44%), Positives = 51/84 (60%), Gaps = 5/84 (5%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F K ++ EC LR TG S+ L+SV VAFF A+L+PIPALR
Sbjct: 471 IFLLAHAFTKAPPDTPLPE-RMGEC----LRSTGTSVALTSVNNMVAFFMAALVPIPALR 525
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ AI++ N ++LV+PAI
Sbjct: 526 AFSLQAAIVVGCNFAAVMLVFPAI 549
>gi|291399026|ref|XP_002715724.1| PREDICTED: Patched 2-like [Oryctolagus cuniculus]
Length = 1202
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/63 (50%), Positives = 46/63 (73%)
Query: 22 LNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVY 81
L E TG L++TG S+ L+S+ VAFF A+L+PIPALR F+LQ AI++ N ++LV+
Sbjct: 482 LQERTGECLQRTGTSVALTSINNMVAFFMAALVPIPALRAFSLQAAIVVGCNFAAVMLVF 541
Query: 82 PAI 84
PA+
Sbjct: 542 PAV 544
>gi|354470150|ref|XP_003497430.1| PREDICTED: protein patched homolog 2 [Cricetulus griseus]
Length = 1182
Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/84 (42%), Positives = 51/84 (60%), Gaps = 5/84 (5%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F K ++ EC LR+TG S+ L+S+ VAFF A L+PIPALR
Sbjct: 471 IFLLAHAFTKLPPDTPLPE-RMGEC----LRRTGTSVALTSINNMVAFFMAVLVPIPALR 525
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ AI++ N ++LV+PAI
Sbjct: 526 AFSLQAAIVVGCNFAAVMLVFPAI 549
>gi|344238503|gb|EGV94606.1| Protein patched-like 2 [Cricetulus griseus]
Length = 1176
Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 36/84 (42%), Positives = 51/84 (60%), Gaps = 5/84 (5%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F K ++ EC LR+TG S+ L+S+ VAFF A L+PIPALR
Sbjct: 471 IFLLAHAFTKLPPDTPLPE-RMGEC----LRRTGTSVALTSINNMVAFFMAVLVPIPALR 525
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ AI++ N ++LV+PAI
Sbjct: 526 AFSLQAAIVVGCNFAAVMLVFPAI 549
>gi|148698625|gb|EDL30572.1| patched homolog 2, isoform CRA_b [Mus musculus]
Length = 1117
Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/84 (44%), Positives = 51/84 (60%), Gaps = 5/84 (5%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F K ++ EC LR TG S+ L+SV VAFF A+L+PIPALR
Sbjct: 406 IFLLAHAFTKAPPDTPLPE-RMGEC----LRSTGTSVALTSVNNMVAFFMAALVPIPALR 460
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ AI++ N ++LV+PAI
Sbjct: 461 AFSLQAAIVVGCNFAAVMLVFPAI 484
>gi|260815657|ref|XP_002602589.1| patched protein-like protein [Branchiostoma floridae]
gi|229287900|gb|EEN58601.1| patched protein-like protein [Branchiostoma floridae]
Length = 1154
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 57/87 (65%), Gaps = 3/87 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
MFL+ TF+ TS +V + TG LR+TG+S+ L+S+ V+ F +++PIPALR
Sbjct: 464 MFLVAHTFSCTTSS---PNVAYLDQTGECLRRTGVSVTLTSLSIIVSCFMGAIVPIPALR 520
Query: 61 VFNLQLAILILFNMFVLLLVYPAIECW 87
+++Q A+++ FN ++L++PAI W
Sbjct: 521 NYSIQSAVVVFFNYLSVILIFPAIISW 547
>gi|312077693|ref|XP_003141416.1| hypothetical protein LOAG_05826 [Loa loa]
gi|307763421|gb|EFO22655.1| hypothetical protein LOAG_05826 [Loa loa]
Length = 1446
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 58/84 (69%), Gaps = 6/84 (7%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
MFL+ + K+ ++K NE GI++++TG+S++++S+ +AF + +L+PIPAL+
Sbjct: 687 MFLLLHNY-----KDVHHTIKNNEI-GILMKETGMSVVITSINNIIAFMAGTLLPIPALK 740
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F Q AIL+ FN+ ++++YPA+
Sbjct: 741 SFCSQTAILLTFNIVAIMIIYPAM 764
>gi|431910053|gb|ELK13140.1| Protein patched like protein 2 [Pteropus alecto]
Length = 1207
Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 32/63 (50%), Positives = 45/63 (71%)
Query: 22 LNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVY 81
L E G L++TG S+ L+S+ VAFF A+L+PIPALR F+LQ AI++ N ++LV+
Sbjct: 487 LQERMGECLQRTGTSVTLTSINNMVAFFMAALVPIPALRAFSLQAAIVVGCNFAAVMLVF 546
Query: 82 PAI 84
PAI
Sbjct: 547 PAI 549
>gi|402593710|gb|EJW87637.1| patched family protein, partial [Wuchereria bancrofti]
Length = 1060
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 58/84 (69%), Gaps = 6/84 (7%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
MFL+ + K+ +VK NE GI+++++G+S++++S+ +AF + +L+PIPAL+
Sbjct: 295 MFLLLHNY-----KDVDHTVKNNEI-GILMKESGMSVVITSINNIIAFMAGTLLPIPALK 348
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F Q AIL+ FNM ++++YPA+
Sbjct: 349 SFCSQTAILLTFNMIAIMVIYPAM 372
>gi|195430070|ref|XP_002063080.1| GK21732 [Drosophila willistoni]
gi|194159165|gb|EDW74066.1| GK21732 [Drosophila willistoni]
Length = 1310
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 55/84 (65%), Gaps = 9/84 (10%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++T +A+ K Q T ++L+K G SI+ S+ + +FF+A+ IP+PAL+
Sbjct: 506 IFMLTAAYAESNRKEQ---------TKLILKKVGPSILFSACSTAGSFFAAAFIPVPALK 556
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
VF+LQ AI++ FN+ LLV+PA+
Sbjct: 557 VFSLQAAIVMCFNVAAALLVFPAL 580
>gi|149035554|gb|EDL90235.1| patched homolog 1 (predicted), isoform CRA_b [Rattus norvegicus]
Length = 892
Score = 65.9 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 35/84 (41%), Positives = 51/84 (60%), Gaps = 5/84 (5%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F K ++ EC LR+TG S+ L+S+ VAFF A L+PIPALR
Sbjct: 181 IFLLAHAFTKAPPNTPLPE-RMGEC----LRRTGTSVALTSINNMVAFFMAVLVPIPALR 235
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ AI++ N ++LV+PA+
Sbjct: 236 AFSLQAAIVVGCNFAAVMLVFPAV 259
>gi|162424315|gb|ABX89896.1| patched, partial [Nematostella vectensis]
Length = 1037
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%), Gaps = 6/84 (7%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
MFLI T+A + + D V G L G+S++L+S VAF A++IPIPALR
Sbjct: 428 MFLIAHTYAAMSDIHPSDQV------GYALGSAGVSVLLTSFNNMVAFLMAAIIPIPALR 481
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F++Q A++++FN + +V+PA+
Sbjct: 482 AFSIQAAVIVVFNYLAVTIVFPAM 505
>gi|296207780|ref|XP_002750791.1| PREDICTED: protein patched homolog 2 [Callithrix jacchus]
Length = 1203
Score = 65.5 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 29/64 (45%), Positives = 45/64 (70%)
Query: 21 KLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLV 80
+L +C G L++TG S++L+S+ AF A+L+PIPALR F+LQ AI++ ++LV
Sbjct: 486 RLQDCMGECLQRTGPSVVLTSINNMAAFLMAALVPIPALRAFSLQAAIVVGCTFVAVMLV 545
Query: 81 YPAI 84
+PAI
Sbjct: 546 FPAI 549
>gi|156404095|ref|XP_001640243.1| predicted protein [Nematostella vectensis]
gi|156227376|gb|EDO48180.1| predicted protein [Nematostella vectensis]
Length = 1120
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%), Gaps = 6/84 (7%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
MFLI T+A + + D V G L G+S++L+S VAF A++IPIPALR
Sbjct: 464 MFLIAHTYAAMSDIHPSDQV------GYALGSAGVSVLLTSFNNMVAFLMAAIIPIPALR 517
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F++Q A++++FN + +V+PA+
Sbjct: 518 AFSIQAAVIVVFNYLAVTIVFPAM 541
>gi|426218689|ref|XP_004003573.1| PREDICTED: protein patched homolog 2 [Ovis aries]
Length = 1021
Score = 65.5 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 31/63 (49%), Positives = 45/63 (71%)
Query: 22 LNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVY 81
L E G L++TG S+ L+S+ VAFF A+L+PIPALR F+LQ AI++ N ++LV+
Sbjct: 301 LQERMGECLQRTGTSVTLTSINNMVAFFMAALVPIPALRAFSLQAAIVVGCNFAAVMLVF 360
Query: 82 PAI 84
PA+
Sbjct: 361 PAV 363
>gi|344287733|ref|XP_003415607.1| PREDICTED: LOW QUALITY PROTEIN: protein patched homolog 2-like
[Loxodonta africana]
Length = 1206
Score = 65.1 bits (157), Expect = 9e-09, Method: Composition-based stats.
Identities = 33/63 (52%), Positives = 44/63 (69%)
Query: 22 LNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVY 81
L E G L++ G S+ L+SV VAFF A+LIPIPALR F+LQ AI++ N ++LV+
Sbjct: 487 LQERMGECLQRMGTSVTLTSVNNMVAFFMAALIPIPALRAFSLQAAIVVGCNFAAVMLVF 546
Query: 82 PAI 84
PAI
Sbjct: 547 PAI 549
>gi|351696845|gb|EHA99763.1| patched-like protein 2 [Heterocephalus glaber]
Length = 1207
Score = 65.1 bits (157), Expect = 9e-09, Method: Composition-based stats.
Identities = 34/84 (40%), Positives = 51/84 (60%), Gaps = 5/84 (5%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F K L E G L++TG S+ L+S+ VAFF A+L+PIPALR
Sbjct: 471 IFLMAHAFTKAPP-----GTPLQERMGECLQRTGTSVALTSINNMVAFFMAALVPIPALR 525
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ A+++ N ++L++PAI
Sbjct: 526 AFSLQAAVVVGCNFTAVMLIFPAI 549
>gi|324500149|gb|ADY40079.1| Protein patched 1 [Ascaris suum]
Length = 1516
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
Query: 18 DSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVL 77
D+VK E G+++++TG+SI+++S+ ++F + +L+PIPALR F Q +IL+ FN+ +
Sbjct: 831 DNVKTEE-VGMLMKETGMSILMTSINNILSFLAGTLLPIPALRGFCAQSSILLTFNLLAI 889
Query: 78 LLVYPAI 84
L +YPAI
Sbjct: 890 LTIYPAI 896
>gi|195151331|ref|XP_002016601.1| GL10416 [Drosophila persimilis]
gi|194110448|gb|EDW32491.1| GL10416 [Drosophila persimilis]
Length = 1155
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 54/84 (64%), Gaps = 9/84 (10%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++T +A+ K Q T ++L+K G SI+ S+ + +FF+A+ IP+PAL+
Sbjct: 506 IFMLTAAYAESNRKEQ---------TKLILKKVGPSILFSACSTAGSFFAAAFIPVPALK 556
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
VF LQ AI++ FN+ LLV+PA+
Sbjct: 557 VFCLQAAIVMCFNLAAALLVFPAM 580
>gi|125810534|ref|XP_001361519.1| GA15365 [Drosophila pseudoobscura pseudoobscura]
gi|54636694|gb|EAL26097.1| GA15365 [Drosophila pseudoobscura pseudoobscura]
Length = 1299
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 54/84 (64%), Gaps = 9/84 (10%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++T +A+ K Q T ++L+K G SI+ S+ + +FF+A+ IP+PAL+
Sbjct: 506 IFMLTAAYAESNRKEQ---------TKLILKKVGPSILFSACSTAGSFFAAAFIPVPALK 556
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
VF LQ AI++ FN+ LLV+PA+
Sbjct: 557 VFCLQAAIVMCFNLAAALLVFPAM 580
>gi|47228251|emb|CAG07646.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1197
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 58/86 (67%), Gaps = 5/86 (5%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
MFL+ +F + S + L E G LR+TG SI L+S+ AFF A+++PIPALR
Sbjct: 530 MFLLAHSFRETGS-----DIPLEERMGNCLRRTGTSIALTSINNMTAFFMAAIVPIPALR 584
Query: 61 VFNLQLAILILFNMFVLLLVYPAIEC 86
VF+LQ AI+++ N+ ++LL++PAI C
Sbjct: 585 VFSLQAAIVVVLNLVMVLLIFPAILC 610
>gi|339253550|ref|XP_003371998.1| protein patched protein [Trichinella spiralis]
gi|316967655|gb|EFV52057.1| protein patched protein [Trichinella spiralis]
Length = 1334
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 53/84 (63%), Gaps = 6/84 (7%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
MFL+ + + Q D + G++L++TGLS +L+SV +AF +L+PIPALR
Sbjct: 568 MFLLLHNYRDIARQYQVDQI------GMLLKETGLSALLTSVNNILAFLVGALLPIPALR 621
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F +Q+A+++L N +L +YPA+
Sbjct: 622 SFCIQVALVLLLNAITILTIYPAL 645
>gi|195382308|ref|XP_002049872.1| GJ21830 [Drosophila virilis]
gi|194144669|gb|EDW61065.1| GJ21830 [Drosophila virilis]
Length = 1319
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 53/84 (63%), Gaps = 9/84 (10%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++T +A+ K Q T ++L+K G SI+ S+ + +FF+A IP+PAL+
Sbjct: 506 IFMLTAAYAESNRKEQ---------TKLILKKVGPSILFSACSTAGSFFAAVFIPVPALK 556
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
VF LQ AI++ FN+ LLV+PA+
Sbjct: 557 VFCLQAAIVMCFNLAAALLVFPAM 580
>gi|170581376|ref|XP_001895656.1| Patched protein homolog 1 [Brugia malayi]
gi|158597317|gb|EDP35497.1| Patched protein homolog 1, putative [Brugia malayi]
Length = 1471
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 51/67 (76%), Gaps = 1/67 (1%)
Query: 18 DSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVL 77
D+VK +E GI++++TG+S++++S+ ++F + +L+PIPALR F Q +IL+ FN+ +
Sbjct: 787 DNVKKDE-VGILMKETGMSVMMTSINNILSFLAGTLLPIPALRAFCAQSSILLTFNLIAV 845
Query: 78 LLVYPAI 84
L ++PAI
Sbjct: 846 LTIFPAI 852
>gi|195028726|ref|XP_001987227.1| GH20087 [Drosophila grimshawi]
gi|193903227|gb|EDW02094.1| GH20087 [Drosophila grimshawi]
Length = 1334
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 53/84 (63%), Gaps = 9/84 (10%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++T +A+ K Q T ++L+K G SI+ S+ + +FF+A IP+PAL+
Sbjct: 506 IFMLTAAYAESNRKEQ---------TKLILKKVGPSILFSACSTAGSFFAAVFIPVPALK 556
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
VF LQ AI++ FN+ LLV+PA+
Sbjct: 557 VFCLQAAIVMCFNLAAALLVFPAM 580
>gi|195122950|ref|XP_002005973.1| GI18803 [Drosophila mojavensis]
gi|193911041|gb|EDW09908.1| GI18803 [Drosophila mojavensis]
Length = 1312
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 53/84 (63%), Gaps = 9/84 (10%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++T +A+ K Q T ++L+K G SI+ S+ + +FF+A IP+PAL+
Sbjct: 506 IFMLTAAYAESNRKEQ---------TKLILKKVGPSILFSACSTAGSFFAAVFIPVPALK 556
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
VF LQ AI++ FN+ LLV+PA+
Sbjct: 557 VFCLQSAIVMCFNLAAALLVFPAM 580
>gi|324500681|gb|ADY40313.1| Protein patched 1 [Ascaris suum]
Length = 1451
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 54/83 (65%), Gaps = 6/83 (7%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
MFL+ + + +VK E GI++++TG+SI+++S +AF + +L+PIPALR
Sbjct: 698 MFLLLHNY-----NDLLHTVKEKEI-GILMKETGMSIVITSTNNIIAFMAGTLLPIPALR 751
Query: 61 VFNLQLAILILFNMFVLLLVYPA 83
F Q AIL+ FN+ ++++YPA
Sbjct: 752 SFCSQSAILLTFNLVAIMVIYPA 774
>gi|402592921|gb|EJW86848.1| hypothetical protein WUBG_02240 [Wuchereria bancrofti]
Length = 762
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 51/67 (76%), Gaps = 1/67 (1%)
Query: 18 DSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVL 77
D+VK +E GI++++TG+S++++S+ ++F + +L+PIPALR F Q +IL+ FN+ +
Sbjct: 83 DNVKKDE-VGILMKETGMSVMMTSINNILSFLAGTLLPIPALRAFCAQSSILLTFNLIAV 141
Query: 78 LLVYPAI 84
L ++PAI
Sbjct: 142 LTIFPAI 148
>gi|312079131|ref|XP_003142041.1| hypothetical protein LOAG_06459 [Loa loa]
gi|307762794|gb|EFO22028.1| hypothetical protein LOAG_06459 [Loa loa]
Length = 1476
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Query: 11 YTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILI 70
+ N ++VK +E G+++++TG+S++++S+ ++F + +L+PIPALR F Q +IL+
Sbjct: 783 HNYHNVMENVKKDE-VGMLMKETGMSVMMTSINNILSFLAGTLLPIPALRAFCAQSSILL 841
Query: 71 LFNMFVLLLVYPAI 84
FN+ +L ++PAI
Sbjct: 842 TFNLIAVLTIFPAI 855
>gi|410032910|ref|XP_003954411.1| PREDICTED: LOW QUALITY PROTEIN: protein patched homolog 2 [Pan
troglodytes]
Length = 1105
Score = 62.0 bits (149), Expect = 9e-08, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 43/63 (68%)
Query: 22 LNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVY 81
L E G L++TG S++L+S+ AF A+L+PIPALR F+LQ AI++ ++LV+
Sbjct: 487 LQERMGECLQRTGTSVVLTSINNMAAFLMAALVPIPALRAFSLQAAIVVGCTFVAVMLVF 546
Query: 82 PAI 84
PAI
Sbjct: 547 PAI 549
>gi|37182233|gb|AAQ88919.1| Patched 2 [Homo sapiens]
Length = 1211
Score = 61.6 bits (148), Expect = 9e-08, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 43/63 (68%)
Query: 22 LNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVY 81
L E G L++TG S++L+S+ AF A+L+PIPALR F+LQ AI++ ++LV+
Sbjct: 487 LQERMGECLQRTGTSVVLTSINNMAAFLMAALVPIPALRAFSLQAAIVVGCTFVAVMLVF 546
Query: 82 PAI 84
PAI
Sbjct: 547 PAI 549
>gi|403291824|ref|XP_003936963.1| PREDICTED: protein patched homolog 2 [Saimiri boliviensis
boliviensis]
Length = 1203
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 50/84 (59%), Gaps = 5/84 (5%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F + +L + G L++TG S++L+S+ AF A+L+PIPALR
Sbjct: 471 VFLLAHAFTE-----ALPGTRLQDQMGECLQRTGTSVVLTSINNMAAFLMAALVPIPALR 525
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ AI++ ++LV+PAI
Sbjct: 526 AFSLQAAIVVGCTFVAVMLVFPAI 549
>gi|3929235|gb|AAC79847.1| receptor protein patched 2 [Homo sapiens]
gi|37183150|gb|AAQ89375.1| Patched 2 [Homo sapiens]
Length = 1203
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 43/63 (68%)
Query: 22 LNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVY 81
L E G L++TG S++L+S+ AF A+L+PIPALR F+LQ AI++ ++LV+
Sbjct: 487 LQERMGECLQRTGTSVVLTSINNMAAFLMAALVPIPALRAFSLQAAIVVGCTFVAVMLVF 546
Query: 82 PAI 84
PAI
Sbjct: 547 PAI 549
>gi|4588015|gb|AAD25953.1|AF087651_1 patched 2 [Homo sapiens]
Length = 1203
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 43/63 (68%)
Query: 22 LNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVY 81
L E G L++TG S++L+S+ AF A+L+PIPALR F+LQ AI++ ++LV+
Sbjct: 487 LQERMGECLQRTGTSVVLTSINNMAAFLMAALVPIPALRAFSLQAAIVVGCTFVAVMLVF 546
Query: 82 PAI 84
PAI
Sbjct: 547 PAI 549
>gi|52145305|ref|NP_003729.3| protein patched homolog 2 isoform 1 [Homo sapiens]
gi|12643356|sp|Q9Y6C5.2|PTC2_HUMAN RecName: Full=Protein patched homolog 2; Short=PTC2
gi|37953297|gb|AAR05447.1| patched homolog 2 (Drosophila) [Homo sapiens]
gi|119627422|gb|EAX07017.1| patched homolog 2 (Drosophila) [Homo sapiens]
gi|157170146|gb|AAI52912.1| Patched homolog 2 (Drosophila) [synthetic construct]
gi|261857972|dbj|BAI45508.1| patched homolog 2 [synthetic construct]
Length = 1203
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 43/63 (68%)
Query: 22 LNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVY 81
L E G L++TG S++L+S+ AF A+L+PIPALR F+LQ AI++ ++LV+
Sbjct: 487 LQERMGECLQRTGTSVVLTSINNMAAFLMAALVPIPALRAFSLQAAIVVGCTFVAVMLVF 546
Query: 82 PAI 84
PAI
Sbjct: 547 PAI 549
>gi|355745241|gb|EHH49866.1| hypothetical protein EGM_00594 [Macaca fascicularis]
Length = 1203
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 43/63 (68%)
Query: 22 LNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVY 81
L E G L++TG S++L+S+ AF A+L+PIPALR F+LQ AI++ ++LV+
Sbjct: 487 LQERMGECLQRTGTSVVLTSINNMAAFLMAALVPIPALRAFSLQAAIVVGCTFVAVMLVF 546
Query: 82 PAI 84
PAI
Sbjct: 547 PAI 549
>gi|355557942|gb|EHH14722.1| hypothetical protein EGK_00690 [Macaca mulatta]
Length = 1203
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 43/63 (68%)
Query: 22 LNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVY 81
L E G L++TG S++L+S+ AF A+L+PIPALR F+LQ AI++ ++LV+
Sbjct: 487 LQERMGECLQRTGTSVVLTSINNMAAFLMAALVPIPALRAFSLQAAIVVGCTFVAVMLVF 546
Query: 82 PAI 84
PAI
Sbjct: 547 PAI 549
>gi|261823993|ref|NP_001159764.1| protein patched homolog 2 isoform 2 [Homo sapiens]
Length = 1146
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 43/63 (68%)
Query: 22 LNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVY 81
L E G L++TG S++L+S+ AF A+L+PIPALR F+LQ AI++ ++LV+
Sbjct: 487 LQERMGECLQRTGTSVVLTSINNMAAFLMAALVPIPALRAFSLQAAIVVGCTFVAVMLVF 546
Query: 82 PAI 84
PAI
Sbjct: 547 PAI 549
>gi|4325111|gb|AAD17260.1| patched 2 [Homo sapiens]
Length = 1146
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 43/63 (68%)
Query: 22 LNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVY 81
L E G L++TG S++L+S+ AF A+L+PIPALR F+LQ AI++ ++LV+
Sbjct: 487 LQERMGECLQRTGTSVVLTSINNMAAFLMAALVPIPALRAFSLQAAIVVGCTFVAVMLVF 546
Query: 82 PAI 84
PAI
Sbjct: 547 PAI 549
>gi|397483312|ref|XP_003812847.1| PREDICTED: protein patched homolog 2 [Pan paniscus]
Length = 1146
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 43/63 (68%)
Query: 22 LNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVY 81
L E G L++TG S++L+S+ AF A+L+PIPALR F+LQ AI++ ++LV+
Sbjct: 487 LQERMGECLQRTGTSVVLTSINNMAAFLMAALVPIPALRAFSLQAAIVVGCTFVAVMLVF 546
Query: 82 PAI 84
PAI
Sbjct: 547 PAI 549
>gi|402854327|ref|XP_003891825.1| PREDICTED: protein patched homolog 2, partial [Papio anubis]
Length = 1038
Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 43/63 (68%)
Query: 22 LNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVY 81
L E G L++TG S++L+S+ AF A+L+PIPALR F+LQ AI++ ++LV+
Sbjct: 487 LQERMGECLQRTGTSVVLTSINNMAAFLMAALVPIPALRAFSLQAAIVVGCTFVAVMLVF 546
Query: 82 PAI 84
PAI
Sbjct: 547 PAI 549
>gi|380804949|gb|AFE74350.1| protein patched homolog 2 isoform 2, partial [Macaca mulatta]
Length = 476
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 5/84 (5%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F + L E G L++TG S++L+S+ AF A+L+PIPALR
Sbjct: 238 VFLLAHAFTET-----LPGTPLQERMGECLQRTGTSVVLTSINNMAAFLMAALVPIPALR 292
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F+LQ AI++ ++LV+PAI
Sbjct: 293 AFSLQAAIVVGCTFVAVMLVFPAI 316
>gi|344031763|gb|AEM77505.1| patched, partial [Drosophila pulchrella]
Length = 436
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 53/84 (63%), Gaps = 9/84 (10%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++T +A+ + Q T ++L+K G SI+ S+ + +FF+A+ IP+PAL+
Sbjct: 261 IFMLTAAYAESNRREQ---------TKLILKKVGPSILFSACSTAGSFFAAAFIPVPALK 311
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
VF LQ AI++ N+ LLV+PA+
Sbjct: 312 VFCLQAAIVMCSNLAAALLVFPAM 335
>gi|344031777|gb|AEM77511.1| patched, partial [Drosophila suzukii]
Length = 438
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 53/84 (63%), Gaps = 9/84 (10%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++T +A+ + Q T ++L+K G SI+ S+ + +FF+A+ IP+PAL+
Sbjct: 261 IFMLTAAYAESNRREQ---------TKLILKKVGPSILFSACSTAGSFFAAAFIPVPALK 311
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
VF LQ AI++ N+ LLV+PA+
Sbjct: 312 VFCLQAAIVMCSNLAAALLVFPAM 335
>gi|71997486|ref|NP_494384.2| Protein PTC-3, isoform a [Caenorhabditis elegans]
gi|351064534|emb|CCD72978.1| Protein PTC-3, isoform a [Caenorhabditis elegans]
Length = 1358
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 51/74 (68%), Gaps = 5/74 (6%)
Query: 15 NQFDSVKLNECT----GIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILI 70
+ +D + +N C G++L++TG+S++L+S+ +AF S ++PIPALR F Q AIL+
Sbjct: 704 HNYDEI-INICNKNEIGVLLKETGMSVMLTSINNILAFISGYVLPIPALRSFCSQTAILL 762
Query: 71 LFNMFVLLLVYPAI 84
FN+ L+ ++PA+
Sbjct: 763 AFNLIFLMFIFPAM 776
>gi|71997494|ref|NP_494383.2| Protein PTC-3, isoform b [Caenorhabditis elegans]
gi|351064535|emb|CCD72979.1| Protein PTC-3, isoform b [Caenorhabditis elegans]
Length = 1361
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 51/74 (68%), Gaps = 5/74 (6%)
Query: 15 NQFDSVKLNECT----GIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILI 70
+ +D + +N C G++L++TG+S++L+S+ +AF S ++PIPALR F Q AIL+
Sbjct: 704 HNYDEI-INICNKNEIGVLLKETGMSVMLTSINNILAFISGYVLPIPALRSFCSQTAILL 762
Query: 71 LFNMFVLLLVYPAI 84
FN+ L+ ++PA+
Sbjct: 763 AFNLIFLMFIFPAM 776
>gi|193205094|ref|NP_001122650.1| Protein PTC-3, isoform c [Caenorhabditis elegans]
gi|351064539|emb|CCD72983.1| Protein PTC-3, isoform c [Caenorhabditis elegans]
Length = 1367
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 51/74 (68%), Gaps = 5/74 (6%)
Query: 15 NQFDSVKLNECT----GIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILI 70
+ +D + +N C G++L++TG+S++L+S+ +AF S ++PIPALR F Q AIL+
Sbjct: 713 HNYDEI-INICNKNEIGVLLKETGMSVMLTSINNILAFISGYVLPIPALRSFCSQTAILL 771
Query: 71 LFNMFVLLLVYPAI 84
FN+ L+ ++PA+
Sbjct: 772 AFNLIFLMFIFPAM 785
>gi|344031737|gb|AEM77493.1| patched, partial [Drosophila liui]
Length = 437
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 53/84 (63%), Gaps = 9/84 (10%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++T +A+ + Q T ++L+K G SI+ S+ + +FF+A+ IP+PAL+
Sbjct: 261 IFMLTAAYAESNRREQ---------TKLILKKVGPSILFSACSTAGSFFAAAFIPVPALK 311
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
VF LQ AI++ N+ LLV+PA+
Sbjct: 312 VFCLQAAIVMCSNLAAALLVFPAM 335
>gi|344031707|gb|AEM77478.1| patched, partial [Drosophila biarmipes]
gi|344031757|gb|AEM77502.1| patched, partial [Drosophila prostipennis]
gi|344031787|gb|AEM77516.1| patched, partial [Drosophila trilutea]
Length = 437
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 53/84 (63%), Gaps = 9/84 (10%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++T +A+ + Q T ++L+K G SI+ S+ + +FF+A+ IP+PAL+
Sbjct: 261 IFMLTAAYAESNRREQ---------TKLILKKVGPSILFSACSTAGSFFAAAFIPVPALK 311
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
VF LQ AI++ N+ LLV+PA+
Sbjct: 312 VFCLQAAIVMCSNLAAALLVFPAM 335
>gi|344031719|gb|AEM77484.1| patched, partial [Drosophila curveadeagus]
gi|344031740|gb|AEM77494.1| patched, partial [Drosophila lutescens]
gi|344031779|gb|AEM77512.1| patched, partial [Drosophila takahashii]
Length = 437
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 53/84 (63%), Gaps = 9/84 (10%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++T +A+ + Q T ++L+K G SI+ S+ + +FF+A+ IP+PAL+
Sbjct: 261 IFMLTAAYAESNRREQ---------TKLILKKVGPSILFSACSTAGSFFAAAFIPVPALK 311
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
VF LQ AI++ N+ LLV+PA+
Sbjct: 312 VFCLQAAIVMCSNLAAALLVFPAM 335
>gi|344031773|gb|AEM77509.1| patched, partial [Drosophila simulans]
Length = 437
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 53/84 (63%), Gaps = 9/84 (10%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++T +A+ + Q T ++L+K G SI+ S+ + +FF+A+ IP+PAL+
Sbjct: 261 IFMLTAAYAESNRREQ---------TKLILKKVGPSILFSACSTAGSFFAAAFIPVPALK 311
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
VF LQ AI++ N+ LLV+PA+
Sbjct: 312 VFCLQAAIVMCSNLAAALLVFPAM 335
>gi|268563256|ref|XP_002646888.1| C. briggsae CBR-PTC-3 protein [Caenorhabditis briggsae]
Length = 1380
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 44/58 (75%)
Query: 27 GIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVYPAI 84
G++L++TG+S++L+S+ +AF S ++PIPALR F Q AIL+ FN+ L+ ++PA+
Sbjct: 738 GVLLKETGMSVMLTSINNILAFISGYVLPIPALRSFCSQTAILLAFNLIFLMFIFPAM 795
>gi|432094483|gb|ELK26046.1| Protein patched like protein 2 [Myotis davidii]
Length = 1164
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 43/63 (68%)
Query: 22 LNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVY 81
L E G L +TG S+ L+S+ AFF A+L+PIPALR F+LQ A+++ N ++LV+
Sbjct: 444 LQERMGECLLRTGPSVALTSINNMAAFFMAALVPIPALRAFSLQAAVVVGCNFAAVMLVF 503
Query: 82 PAI 84
PA+
Sbjct: 504 PAV 506
>gi|195551596|ref|XP_002076264.1| GD15378 [Drosophila simulans]
gi|194201913|gb|EDX15489.1| GD15378 [Drosophila simulans]
Length = 538
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 53/84 (63%), Gaps = 9/84 (10%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++T +A+ + Q T ++L+K G SI+ S+ + +FF+A+ IP+PAL+
Sbjct: 349 IFMLTAAYAESNRREQ---------TKLILKKVGPSILFSACSTAGSFFAAAFIPVPALK 399
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
VF LQ AI++ N+ LLV+PA+
Sbjct: 400 VFCLQAAIVMCSNLAAALLVFPAM 423
>gi|195332542|ref|XP_002032956.1| GM21054 [Drosophila sechellia]
gi|194124926|gb|EDW46969.1| GM21054 [Drosophila sechellia]
Length = 1286
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 85/199 (42%), Gaps = 48/199 (24%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++T +A+ + Q T ++L+K G SI+ S+ + +FF+A+ IP+PAL+
Sbjct: 506 IFMLTAAYAESNRREQ---------TKLILKKVGPSILFSACSTAGSFFAAAFIPVPALK 556
Query: 61 VFNLQLAILILFNMFVLLLVYPAI--------------------ECWV------------ 88
VF LQ AI++ N+ LLV+PA+ W
Sbjct: 557 VFCLQAAIVMCSNLAAALLVFPAMISLDLRRRTAGRADIFCCCFPVWKEQPKVAPPVLPL 616
Query: 89 ------GSAAPKDQSLLGEDLMTSDEEEDEHTSSACKLKSYSEFSCRYLARQH-ARLITR 141
G+ PK + L + ++ S S + FS A QH + R
Sbjct: 617 NNNNGRGARHPKSCNNNRVPLPAQNPLLEQRADSPGSSHSLASFSLANFAFQHYTPFLMR 676
Query: 142 PGVKMIVVFGFIGVLIASV 160
VK + V GF+ LI+S+
Sbjct: 677 SWVKFLTVMGFLAALISSL 695
>gi|226505|prf||1515355A patched gene
Length = 1299
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 53/84 (63%), Gaps = 9/84 (10%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++T +A+ + Q T ++L+K G SI+ S+ + +FF+A+ IP+PAL+
Sbjct: 506 IFMLTAAYAESNRREQ---------TKLILKKVGPSILFSACSTAGSFFAAAFIPVPALK 556
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
VF LQ AI++ N+ LLV+PA+
Sbjct: 557 VFCLQAAIVMCSNLAAALLVFPAM 580
>gi|8390|emb|CAA35591.1| patched protein [Drosophila melanogaster]
Length = 1299
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 53/84 (63%), Gaps = 9/84 (10%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++T +A+ + Q T ++L+K G SI+ S+ + +FF+A+ IP+PAL+
Sbjct: 506 IFMLTAAYAESNRREQ---------TKLILKKVGPSILFSACSTAGSFFAAAFIPVPALK 556
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
VF LQ AI++ N+ LLV+PA+
Sbjct: 557 VFCLQAAIVMCSNLAAALLVFPAM 580
>gi|24586628|ref|NP_523661.2| patched [Drosophila melanogaster]
gi|17380531|sp|P18502.2|PTC_DROME RecName: Full=Protein patched; AltName: Full=Hedgehog receptor
gi|7304020|gb|AAF59062.1| patched [Drosophila melanogaster]
Length = 1286
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 53/84 (63%), Gaps = 9/84 (10%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++T +A+ + Q T ++L+K G SI+ S+ + +FF+A+ IP+PAL+
Sbjct: 506 IFMLTAAYAESNRREQ---------TKLILKKVGPSILFSACSTAGSFFAAAFIPVPALK 556
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
VF LQ AI++ N+ LLV+PA+
Sbjct: 557 VFCLQAAIVMCSNLAAALLVFPAM 580
>gi|552099|gb|AAA28696.1| membrane protein [Drosophila melanogaster]
Length = 1286
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 53/84 (63%), Gaps = 9/84 (10%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++T +A+ + Q T ++L+K G SI+ S+ + +FF+A+ IP+PAL+
Sbjct: 506 IFMLTAAYAESNRREQ---------TKLILKKVGPSILFSACSTAGSFFAAAFIPVPALK 556
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
VF LQ AI++ N+ LLV+PA+
Sbjct: 557 VFCLQAAIVMCSNLAAALLVFPAM 580
>gi|194863425|ref|XP_001970434.1| GG23375 [Drosophila erecta]
gi|190662301|gb|EDV59493.1| GG23375 [Drosophila erecta]
Length = 1286
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 53/84 (63%), Gaps = 9/84 (10%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++T +A+ + Q T ++L+K G SI+ S+ + +FF+A+ IP+PAL+
Sbjct: 506 IFMLTAAYAESNRREQ---------TKLILKKVGPSILFSACSTAGSFFAAAFIPVPALK 556
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
VF LQ AI++ N+ LLV+PA+
Sbjct: 557 VFCLQAAIVMCSNLAAALLVFPAM 580
>gi|297665121|ref|XP_002810954.1| PREDICTED: protein patched homolog 2 isoform 2 [Pongo abelii]
Length = 1146
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/63 (44%), Positives = 43/63 (68%)
Query: 22 LNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVY 81
L E G L++TG +++L+S+ AF A+L+PIPALR F+LQ AI++ ++LV+
Sbjct: 487 LQERMGECLQRTGTNVVLTSINNVAAFLMAALVPIPALRAFSLQAAIVVGCTFVAVMLVF 546
Query: 82 PAI 84
PAI
Sbjct: 547 PAI 549
>gi|197276678|ref|NP_001127849.1| patched [Tribolium castaneum]
gi|270015128|gb|EFA11576.1| patched [Tribolium castaneum]
Length = 1175
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 45/56 (80%)
Query: 29 VLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVYPAI 84
VL++TG SII +++ S AF +A+++P+PALRVF LQ A+L++F+ LL+V+P++
Sbjct: 490 VLQRTGPSIISAALVNSAAFLAAAVLPVPALRVFCLQCAVLVIFHGAALLIVFPSL 545
>gi|344031747|gb|AEM77497.1| patched, partial [Drosophila ogumai]
Length = 443
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 52/84 (61%), Gaps = 9/84 (10%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++T +A+ + Q T ++L+K G SI+ + + +FF+A+ IP+PAL+
Sbjct: 261 IFMLTAAYAESNRREQ---------TKLILKKVGPSILFGACSTAGSFFAAAFIPVPALK 311
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
VF LQ AI++ N+ LLV+PA+
Sbjct: 312 VFCLQAAIVMCSNLAAALLVFPAM 335
>gi|344031733|gb|AEM77491.1| patched, partial [Drosophila leontia]
Length = 444
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 52/84 (61%), Gaps = 9/84 (10%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++T +A+ + Q T ++L+K G SI+ + + +FF+A+ IP+PAL+
Sbjct: 261 IFMLTAAYAESNRREQ---------TKLILKKVGPSILFGACSTAGSFFAAAFIPVPALK 311
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
VF LQ AI++ N+ LLV+PA+
Sbjct: 312 VFCLQAAIVMCSNLAAALLVFPAM 335
>gi|344031742|gb|AEM77495.1| patched, partial [Drosophila madikerii]
gi|344031749|gb|AEM77498.1| patched, partial [Drosophila ohnishii]
Length = 444
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 52/84 (61%), Gaps = 9/84 (10%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++T +A+ + Q T ++L+K G SI+ + + +FF+A+ IP+PAL+
Sbjct: 261 IFMLTAAYAESNRREQ---------TKLILKKVGPSILFGACSTAGSFFAAAFIPVPALK 311
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
VF LQ AI++ N+ LLV+PA+
Sbjct: 312 VFCLQAAIVMCSNLAAALLVFPAM 335
>gi|344031731|gb|AEM77490.1| patched, partial [Drosophila kikkawai]
Length = 444
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 52/84 (61%), Gaps = 9/84 (10%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++T +A+ + Q T ++L+K G SI+ + + +FF+A+ IP+PAL+
Sbjct: 261 IFMLTAAYAESNRREQ---------TKLILKKVGPSILFGACSTAGSFFAAAFIPVPALK 311
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
VF LQ AI++ N+ LLV+PA+
Sbjct: 312 VFCLQAAIVMCSNLAAALLVFPAM 335
>gi|344031715|gb|AEM77482.1| patched, partial [Drosophila bocki]
Length = 442
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 52/84 (61%), Gaps = 9/84 (10%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++T +A+ + Q T ++L+K G SI+ + + +FF+A+ IP+PAL+
Sbjct: 261 IFMLTAAYAESNRREQ---------TKLILKKVGPSILFGACSTAGSFFAAAFIPVPALK 311
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
VF LQ AI++ N+ LLV+PA+
Sbjct: 312 VFCLQAAIVMCSNLAAALLVFPAM 335
>gi|344031783|gb|AEM77514.1| patched, partial [Drosophila trapezifrons]
Length = 441
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 52/84 (61%), Gaps = 9/84 (10%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++T +A+ + Q T ++L+K G SI+ + + +FF+A+ IP+PAL+
Sbjct: 261 IFMLTAAYAESNRREQ---------TKLILKKVGPSILFGACSTAGSFFAAAFIPVPALK 311
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
VF LQ AI++ N+ LLV+PA+
Sbjct: 312 VFCLQAAIVMCSNLAAALLVFPAM 335
>gi|344031745|gb|AEM77496.1| patched, partial [Drosophila mayri]
Length = 445
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 52/84 (61%), Gaps = 9/84 (10%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++T +A+ + Q T ++L+K G SI+ + + +FF+A+ IP+PAL+
Sbjct: 261 IFMLTAAYAESNRREQ---------TKLILKKVGPSILFGACSTAGSFFAAAFIPVPALK 311
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
VF LQ AI++ N+ LLV+PA+
Sbjct: 312 VFCLQAAIVMCSNLAAALLVFPAM 335
>gi|344031735|gb|AEM77492.1| patched, partial [Drosophila lini]
Length = 443
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 52/84 (61%), Gaps = 9/84 (10%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++T +A+ + Q T ++L+K G SI+ + + +FF+A+ IP+PAL+
Sbjct: 261 IFMLTAAYAESNRREQ---------TKLILKKVGPSILFGACSTAGSFFAAAFIPVPALK 311
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
VF LQ AI++ N+ LLV+PA+
Sbjct: 312 VFCLQAAIVMCSNLAAALLVFPAM 335
>gi|344031781|gb|AEM77513.1| patched, partial [Drosophila tani]
Length = 441
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 52/84 (61%), Gaps = 9/84 (10%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++T +A+ + Q T ++L+K G SI+ + + +FF+A+ IP+PAL+
Sbjct: 261 IFMLTAAYAESNRREQ---------TKLILKKVGPSILFGACSTAGSFFAAAFIPVPALK 311
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
VF LQ AI++ N+ LLV+PA+
Sbjct: 312 VFCLQAAIVMCSNLAAALLVFPAM 335
>gi|344031753|gb|AEM77500.1| patched, partial [Drosophila parvula]
Length = 443
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 52/84 (61%), Gaps = 9/84 (10%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++T +A+ + Q T ++L+K G SI+ + + +FF+A+ IP+PAL+
Sbjct: 261 IFMLTAAYAESNRREQ---------TKLILKKVGPSILFGACSTAGSFFAAAFIPVPALK 311
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
VF LQ AI++ N+ LLV+PA+
Sbjct: 312 VFCLQAAIVMCSNLAAALLVFPAM 335
>gi|344031770|gb|AEM77508.1| patched, partial [Drosophila seguyi]
Length = 443
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 52/84 (61%), Gaps = 9/84 (10%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++T +A+ + Q T ++L+K G SI+ + + +FF+A+ IP+PAL+
Sbjct: 261 IFMLTAAYAESNRREQ---------TKLILKKVGPSILFGACSTAGSFFAAAFIPVPALK 311
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
VF LQ AI++ N+ LLV+PA+
Sbjct: 312 VFCLQAAIVMCSNLAAALLVFPAM 335
>gi|170033498|ref|XP_001844614.1| patched [Culex quinquefasciatus]
gi|167874462|gb|EDS37845.1| patched [Culex quinquefasciatus]
Length = 1211
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 57/84 (67%), Gaps = 9/84 (10%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++T +A+ + NE TG VL+K GLS++ S + +FF+A++IP+PALR
Sbjct: 466 IFVLTHAYAERDN---------NEHTGQVLKKAGLSVLFSGAASAGSFFAAAMIPVPALR 516
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
VF Q AIL++FN+ +LLV+PA+
Sbjct: 517 VFCFQGAILMVFNLAAVLLVFPAM 540
>gi|344031768|gb|AEM77507.1| patched, partial [Drosophila rufa]
Length = 441
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 52/84 (61%), Gaps = 9/84 (10%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++T +A+ + Q T ++L+K G SI+ + + +FF+A+ IP+PAL+
Sbjct: 261 IFMLTAAYAESNRREQ---------TKLILKKVGPSILFGACSTAGSFFAAAFIPVPALK 311
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
VF LQ AI++ N+ LLV+PA+
Sbjct: 312 VFCLQAAIVMCSNLAAALLVFPAM 335
>gi|344031704|gb|AEM77477.1| patched, partial [Drosophila baimaii]
Length = 444
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 52/84 (61%), Gaps = 9/84 (10%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++T +A+ + Q T ++L+K G SI+ + + +FF+A+ IP+PAL+
Sbjct: 261 IFMLTAAYAESNRREQ---------TKLILKKVGPSILFGACSTAGSFFAAAFIPVPALK 311
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
VF LQ AI++ N+ LLV+PA+
Sbjct: 312 VFCLQAAIVMCSNLAAALLVFPAM 335
>gi|344031717|gb|AEM77483.1| patched, partial [Drosophila constricta]
Length = 444
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 52/84 (61%), Gaps = 9/84 (10%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++T +A+ + Q T ++L+K G SI+ + + +FF+A+ IP+PAL+
Sbjct: 261 IFMLTAAYAESNRREQ---------TKLILKKVGPSILFGACSTAGSFFAAAFIPVPALK 311
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
VF LQ AI++ N+ LLV+PA+
Sbjct: 312 VFCLQAAIVMCSNLAAALLVFPAM 335
>gi|344031727|gb|AEM77488.1| patched, partial [Drosophila fuyamai]
gi|344031755|gb|AEM77501.1| patched, partial [Drosophila prolongata]
Length = 438
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 52/84 (61%), Gaps = 9/84 (10%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++T +A+ + Q T ++L+K G SI+ + + +FF+A+ IP+PAL+
Sbjct: 261 IFMLTAAYAESNRREQ---------TKLILKKVGPSILFGACSTAGSFFAAAFIPVPALK 311
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
VF LQ AI++ N+ LLV+PA+
Sbjct: 312 VFCLQAAIVMCSNLAAALLVFPAM 335
>gi|344031725|gb|AEM77487.1| patched, partial [Drosophila ficusphila]
Length = 440
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 52/84 (61%), Gaps = 9/84 (10%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++T +A+ + Q T ++L+K G SI+ + + +FF+A+ IP+PAL+
Sbjct: 261 IFMLTAAYAESNRREQ---------TKLILKKVGPSILFGACSTAGSFFAAAFIPVPALK 311
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
VF LQ AI++ N+ LLV+PA+
Sbjct: 312 VFCLQAAIVMCSNLAAALLVFPAM 335
>gi|344031713|gb|AEM77481.1| patched, partial [Drosophila birchii]
gi|344031729|gb|AEM77489.1| patched, partial [Drosophila jambulina]
Length = 444
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 52/84 (61%), Gaps = 9/84 (10%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++T +A+ + Q T ++L+K G SI+ + + +FF+A+ IP+PAL+
Sbjct: 261 IFMLTAAYAESNRREQ---------TKLILKKVGPSILFGACSTAGSFFAAAFIPVPALK 311
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
VF LQ AI++ N+ LLV+PA+
Sbjct: 312 VFCLQAAIVMCSNLAAALLVFPAM 335
>gi|441636290|ref|XP_003278656.2| PREDICTED: protein patched homolog 2 [Nomascus leucogenys]
Length = 1106
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 28/63 (44%), Positives = 42/63 (66%)
Query: 22 LNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVY 81
L E G L++ G S++L+S+ AF A+L+PIPALR F+LQ AI++ ++LV+
Sbjct: 487 LQERMGECLQRMGTSVVLTSINNMAAFLMAALVPIPALRAFSLQAAIVVGCTFVAVMLVF 546
Query: 82 PAI 84
PAI
Sbjct: 547 PAI 549
>gi|193205322|ref|NP_495662.2| Protein PTC-1 [Caenorhabditis elegans]
gi|205371815|sp|Q09614.2|PTC1_CAEEL RecName: Full=Protein patched homolog 1
gi|172052253|emb|CAA86843.2| Protein PTC-1 [Caenorhabditis elegans]
Length = 1408
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 48/73 (65%), Gaps = 3/73 (4%)
Query: 15 NQFDSVKL---NECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILIL 71
N D VKL + I++R+TG+SI+ +S+ ++F + +L+PIPALR F Q +IL+
Sbjct: 741 NYRDVVKLAGGHAEMAILMRETGMSILCTSINNILSFLTGTLLPIPALRSFCAQSSILLT 800
Query: 72 FNMFVLLLVYPAI 84
FN +L +YPAI
Sbjct: 801 FNFIAILTIYPAI 813
>gi|268532612|ref|XP_002631434.1| Hypothetical protein CBG03294 [Caenorhabditis briggsae]
Length = 1402
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 48/73 (65%), Gaps = 3/73 (4%)
Query: 15 NQFDSVKL---NECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILIL 71
N D VKL + I++R+TG+SI+ +S+ ++F + +L+PIPALR F Q +IL+
Sbjct: 734 NYRDVVKLAGGHAEMAILMRETGMSILCTSINNILSFLTGTLLPIPALRSFCAQSSILLT 793
Query: 72 FNMFVLLLVYPAI 84
FN +L +YPAI
Sbjct: 794 FNFIAILTIYPAI 806
>gi|308509318|ref|XP_003116842.1| CRE-PTC-1 protein [Caenorhabditis remanei]
gi|308241756|gb|EFO85708.1| CRE-PTC-1 protein [Caenorhabditis remanei]
Length = 1403
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 48/73 (65%), Gaps = 3/73 (4%)
Query: 15 NQFDSVKL---NECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILIL 71
N D VKL + I++R+TG+SI+ +S+ ++F + +L+PIPALR F Q +IL+
Sbjct: 734 NYRDVVKLAGGHAEMAILMRETGMSILCTSINNILSFLTGTLLPIPALRSFCAQSSILLT 793
Query: 72 FNMFVLLLVYPAI 84
FN +L +YPAI
Sbjct: 794 FNFIAILTIYPAI 806
>gi|344031709|gb|AEM77479.1| patched, partial [Drosophila biauraria]
Length = 441
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 51/84 (60%), Gaps = 9/84 (10%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++T +A+ + Q T ++L+K G SI+ + + FF+A+ IP+PAL+
Sbjct: 261 IFMLTAAYAESNRREQ---------TKLILKKVGPSILFGACSTAGTFFAAAFIPVPALK 311
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
VF LQ AI++ N+ LLV+PA+
Sbjct: 312 VFCLQAAIVMCSNLAAALLVFPAM 335
>gi|344031702|gb|AEM77476.1| patched, partial [Drosophila auraria]
Length = 443
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 51/84 (60%), Gaps = 9/84 (10%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++T +A+ + Q T ++L+K G SI+ + + FF+A+ IP+PAL+
Sbjct: 261 IFMLTAAYAESNRREQ---------TKLILKKVGPSILFGACSTAGTFFAAAFIPVPALK 311
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
VF LQ AI++ N+ LLV+PA+
Sbjct: 312 VFCLQAAIVMCSNLAAALLVFPAM 335
>gi|341887080|gb|EGT43015.1| CBN-PTC-1 protein [Caenorhabditis brenneri]
Length = 1515
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 48/73 (65%), Gaps = 3/73 (4%)
Query: 15 NQFDSVKL---NECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILIL 71
N D VKL + I++R+TG+SI+ +S+ ++F + +L+PIPALR F Q +IL+
Sbjct: 847 NYRDVVKLAGGHAEMAILMRETGMSILCTSINNILSFLTGTLLPIPALRSFCAQSSILLT 906
Query: 72 FNMFVLLLVYPAI 84
FN +L +YPAI
Sbjct: 907 FNFIAILTIYPAI 919
>gi|344031785|gb|AEM77515.1| patched, partial [Drosophila triauraria]
Length = 441
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 51/84 (60%), Gaps = 9/84 (10%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++T +A+ + Q T ++L+K G SI+ + + FF+A+ IP+PAL+
Sbjct: 261 IFMLTAAYAESNRREQ---------TKLILKKVGPSILFGACSTAGTFFAAAFIPVPALK 311
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
VF LQ AI++ N+ LLV+PA+
Sbjct: 312 VFCLQAAIVMCSNLAAALLVFPAM 335
>gi|344031775|gb|AEM77510.1| patched, partial [Drosophila subauraria]
Length = 441
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 51/84 (60%), Gaps = 9/84 (10%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++T +A+ + Q T ++L+K G SI+ + + FF+A+ IP+PAL+
Sbjct: 261 IFMLTAAYAESNRREQ---------TKLILKKVGPSILFGACSTAGTFFAAAFIPVPALK 311
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
VF LQ AI++ N+ LLV+PA+
Sbjct: 312 VFCLQAAIVMCSNLAAALLVFPAM 335
>gi|344031723|gb|AEM77486.1| patched, partial [Drosophila eugracilis]
Length = 441
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 51/84 (60%), Gaps = 9/84 (10%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++T +A+ + Q T ++L+K G SI+ + + FF+A+ IP+PAL+
Sbjct: 261 IFMLTAAYAESNRREQ---------TKLILKKVGPSILFGACSTAGTFFAAAFIPVPALK 311
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
VF LQ AI++ N+ LLV+PA+
Sbjct: 312 VFCLQAAIVMCSNLAAALLVFPAM 335
>gi|224459202|gb|ACN43336.1| patched [Tribolium castaneum]
Length = 430
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 45/56 (80%)
Query: 29 VLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVYPAI 84
VL++TG SII +++ S AF +A+++P+PALRVF LQ A+L++F+ LL+V+P++
Sbjct: 160 VLQRTGPSIISAALVNSAAFLAAAVLPVPALRVFCLQCAVLVIFHGAALLIVFPSL 215
>gi|344031766|gb|AEM77506.1| patched, partial [Drosophila quadraria]
Length = 441
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 51/84 (60%), Gaps = 9/84 (10%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++T +A+ + Q T ++L+K G SI+ + + FF+A+ IP+PAL+
Sbjct: 261 IFMLTAAYAESNRREQ---------TKLILKKVGPSILFGACSTAGTFFAAAFIPVPALK 311
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
VF LQ AI++ N+ LLV+PA+
Sbjct: 312 VFCLQAAIVMCSNLAAALLVFPAM 335
>gi|344031721|gb|AEM77485.1| patched, partial [Drosophila elegans]
Length = 440
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 51/84 (60%), Gaps = 9/84 (10%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++T +A+ + Q T ++L+K G SI+ + + FF+A+ IP+PAL+
Sbjct: 261 IFMLTAAYAESNRREQ---------TKLILKKVGPSILFGACSTAGTFFAAAFIPVPALK 311
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
VF LQ AI++ N+ LLV+PA+
Sbjct: 312 VFCLQAAIVMCSNLAAALLVFPAM 335
>gi|198428455|ref|XP_002122752.1| PREDICTED: patched receptor [Ciona intestinalis]
Length = 1452
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
MFL+ F + + +E TG L++ G+S+ L+SV F + +IP+PALR
Sbjct: 404 MFLMAHHFGEIAV---LSYIPFSERTGECLKRVGVSVCLTSVAILSGFLFSLIIPMPALR 460
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F LQ A++ +FN+F +L+++P+I
Sbjct: 461 AFGLQAAVVTVFNLFSVLVIFPSI 484
>gi|71987094|ref|NP_495218.2| Protein PTC-2 [Caenorhabditis elegans]
gi|351058623|emb|CCD66118.1| Protein PTC-2 [Caenorhabditis elegans]
Length = 667
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
Query: 14 KNQFDSVKL---NECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILI 70
N D VKL + I++R+TG+SI+ +S+ ++F + +L+PIPALR F Q +IL+
Sbjct: 193 HNYRDVVKLAGGHAEMAILMRETGMSILCTSINNILSFLTGTLLPIPALRSFCAQSSILL 252
Query: 71 LFNMFVLLLVYPAI 84
FN +L +YPAI
Sbjct: 253 TFNFIAILTIYPAI 266
>gi|195474779|ref|XP_002089667.1| GE19216 [Drosophila yakuba]
gi|194175768|gb|EDW89379.1| GE19216 [Drosophila yakuba]
Length = 1286
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 52/84 (61%), Gaps = 9/84 (10%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++T +A+ + Q T ++L+K G SI+ + + +FF+A+ IP+PAL+
Sbjct: 506 IFMLTAAYAESNRREQ---------TKLILKKVGPSILFGACSTAGSFFAAAFIPVPALK 556
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
VF LQ AI++ N+ LLV+PA+
Sbjct: 557 VFCLQAAIVMCSNLAAALLVFPAM 580
>gi|194753013|ref|XP_001958813.1| GF12372 [Drosophila ananassae]
gi|190620111|gb|EDV35635.1| GF12372 [Drosophila ananassae]
Length = 1290
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 52/84 (61%), Gaps = 9/84 (10%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++T +A+ + Q T ++L+K G SI+ + + +FF+A+ IP+PAL+
Sbjct: 506 IFMLTAAYAESNRREQ---------TKLILKKVGPSILFGACSTAGSFFAAAFIPVPALK 556
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
VF LQ AI++ N+ +LV+PA+
Sbjct: 557 VFCLQAAIVMCSNLAAAILVFPAL 580
>gi|312373266|gb|EFR21041.1| hypothetical protein AND_17673 [Anopheles darlingi]
Length = 1344
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 48/62 (77%)
Query: 23 NECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVYP 82
+E TG VL+K G+ ++ + + AFF+A+LIP+PALRVF LQ AILI+FN+ ++LV+P
Sbjct: 476 SEHTGHVLKKAGMGVLFAGATTAAAFFAATLIPVPALRVFCLQGAILIVFNLASVMLVFP 535
Query: 83 AI 84
A+
Sbjct: 536 AM 537
>gi|426362407|ref|XP_004048356.1| PREDICTED: protein patched homolog 1 [Gorilla gorilla gorilla]
Length = 1335
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 45/69 (65%), Gaps = 3/69 (4%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 515 VFLLAHAFSE-TGQNK--RIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 571
Query: 61 VFNLQLAIL 69
F+LQ ++
Sbjct: 572 AFSLQYILM 580
>gi|76559762|dbj|BAE45300.1| PTCH protein +12b [Homo sapiens]
Length = 106
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 45/69 (65%), Gaps = 3/69 (4%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + TG L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 14 VFLLAHAFSE-TGQNK--RIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALR 70
Query: 61 VFNLQLAIL 69
F+LQ ++
Sbjct: 71 AFSLQYILM 79
>gi|449549853|gb|EMD40818.1| hypothetical protein CERSUDRAFT_131117 [Ceriporiopsis subvermispora
B]
Length = 1397
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 82/176 (46%), Gaps = 45/176 (25%)
Query: 14 KNQFDSVKLNECT----------------GIVLRKTGLSIILSSVCKSVAFFSASLIPIP 57
++QFDSV +E + + K G SI+LS++ +++AF +L+P+P
Sbjct: 789 RSQFDSVHSHEDSVDAASTPLYLSQEERVARTVAKMGPSILLSTITETIAFALGALVPMP 848
Query: 58 ALRVFNLQLAILILFNMFVLLLVYPA-------------IECWVGSAAPKDQSLLGEDLM 104
A+R F L A +L N + + V+ + ++C+ P +LL E +
Sbjct: 849 AVRNFALYAAGSVLLNAMLQVTVFVSALVIDLKRVESSRVDCFPCIRMPPRIALLDEPIP 908
Query: 105 TSDEEEDEHTSSACKLKSYSEFSCRYLARQHARLITRPGVKMIVVFGFIGVLIASV 160
S L + + R++ R++A I RP VK +V+ F GVL+AS+
Sbjct: 909 NS------------GLGTLA----RFIRRRYAPFILRPVVKGVVLLVFSGVLVASI 948
>gi|403412743|emb|CCL99443.1| predicted protein [Fibroporia radiculosa]
Length = 1419
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 80/177 (45%), Gaps = 45/177 (25%)
Query: 13 SKNQFDSVKLNECT----------------GIVLRKTGLSIILSSVCKSVAFFSASLIPI 56
S++QFDS+ +E + L + G SI+LSS+ ++VAF +L+P+
Sbjct: 810 SRSQFDSLHSHEDSVDAVSTPLYLTAEERVARTLARMGPSILLSSITETVAFALGALVPM 869
Query: 57 PALRVFNLQLAILILFNMFVLLLVYPA-------------IECWVGSAAPKDQSLLGEDL 103
PA+R F L A +L N + + V+ + ++C+ P +L+ E
Sbjct: 870 PAVRNFALYAAGSVLLNAILQVTVFVSALVIDLKRVEASRVDCFPCIRLPPRIALVDE-- 927
Query: 104 MTSDEEEDEHTSSACKLKSYSEFSCRYLARQHARLITRPGVKMIVVFGFIGVLIASV 160
S L + + R++ R +A + RP VK V+ FIGVL AS+
Sbjct: 928 ----------VPSGSGLGTIA----RFIRRYYAPFVLRPAVKGAVLLMFIGVLFASI 970
>gi|291461540|dbj|BAI83404.1| patched [Parasteatoda tepidariorum]
Length = 1332
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 42/62 (67%)
Query: 23 NECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVYP 82
++ G +LR+TG+++ L+SV AF A +IPIPALR F LQ +LI F+ +L+++
Sbjct: 524 DQLAGEILRRTGVNMALTSVSVIGAFTVAYIIPIPALRSFVLQAGVLIAFSTVTILIIFS 583
Query: 83 AI 84
AI
Sbjct: 584 AI 585
>gi|328703521|ref|XP_001949597.2| PREDICTED: protein patched-like isoform 1 [Acyrthosiphon pisum]
gi|328703523|ref|XP_003242227.1| PREDICTED: protein patched-like isoform 3 [Acyrthosiphon pisum]
Length = 1306
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 47/78 (60%), Gaps = 6/78 (7%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNEC------TGIVLRKTGLSIILSSVCKSVAFFSASLI 54
MFL+ ++ + +S + + C G+VL+ TG +I+++S V F +AS++
Sbjct: 485 MFLLMFSYERVSSHGFDKATQKYSCHLGKKQVGMVLKSTGTNILMTSFITIVIFITASVV 544
Query: 55 PIPALRVFNLQLAILILF 72
PIPALR F LQ+AIL +F
Sbjct: 545 PIPALRAFCLQVAILAMF 562
>gi|328703519|ref|XP_003242226.1| PREDICTED: protein patched-like isoform 2 [Acyrthosiphon pisum]
Length = 1311
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 47/78 (60%), Gaps = 6/78 (7%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNEC------TGIVLRKTGLSIILSSVCKSVAFFSASLI 54
MFL+ ++ + +S + + C G+VL+ TG +I+++S V F +AS++
Sbjct: 490 MFLLMFSYERVSSHGFDKATQKYSCHLGKKQVGMVLKSTGTNILMTSFITIVIFITASVV 549
Query: 55 PIPALRVFNLQLAILILF 72
PIPALR F LQ+AIL +F
Sbjct: 550 PIPALRAFCLQVAILAMF 567
>gi|76559764|dbj|BAE45301.1| Ptch1 protein +12b [Mus musculus]
Length = 52
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 33/51 (64%)
Query: 15 NQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQ 65
Q + + TG L++TG S+ L+S+ AFF A+LIPIPALR F+LQ
Sbjct: 1 GQNKRIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALRAFSLQ 51
>gi|344031751|gb|AEM77499.1| patched, partial [Drosophila parabipectinata]
Length = 447
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 9/84 (10%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++T +A+ + Q T +L+K G SI+ + +FF+ + I +PAL+
Sbjct: 261 IFMLTAAYAESNRREQ---------TSWILKKEGPSILFGACSTGGSFFAGAFIRVPALK 311
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
VF LQ AI++ N+ +L +PAI
Sbjct: 312 VFCLQAAIVMCSNLAAAILEFPAI 335
>gi|241027837|ref|XP_002406320.1| patched-2 protein, putative [Ixodes scapularis]
gi|215491922|gb|EEC01563.1| patched-2 protein, putative [Ixodes scapularis]
Length = 1172
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/60 (43%), Positives = 37/60 (61%)
Query: 24 ECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVYPA 83
E TG VL+ G S++L F +A+LIP+PALR F Q A+L F + +LL++PA
Sbjct: 470 ERTGQVLKCVGTSVLLVWASTVGGFVAAALIPVPALRAFVFQAALLHTFAVAAMLLLFPA 529
>gi|145357117|ref|XP_001422769.1| RND family transporter: Patched (Ptc) segmentation polarity protein
[Ostreococcus lucimarinus CCE9901]
gi|144583012|gb|ABP01086.1| RND family transporter: Patched (Ptc) segmentation polarity protein
[Ostreococcus lucimarinus CCE9901]
Length = 1183
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 18 DSVKLNECTGI-VLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFV 76
DS+ NE + LR G S+ LSS AF ++ P+PA+R F +Q+A + N V
Sbjct: 629 DSISSNEDILVRTLRDGGTSVTLSSAMNFAAFLLGAISPVPAVRNFGIQIACAVACNYIV 688
Query: 77 LLLVYPAI 84
LLV+P I
Sbjct: 689 ALLVFPGI 696
>gi|168030492|ref|XP_001767757.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681077|gb|EDQ67508.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1170
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 70/159 (44%), Gaps = 25/159 (15%)
Query: 14 KNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFN 73
K Q S++L G+ L + G SI L+S+ + +AF S P+PA RVF+L A+ +L +
Sbjct: 681 KRQDLSLQLESRVGLALAEVGPSITLASLAEVLAFAVGSFTPMPACRVFSLFAAVAVLLD 740
Query: 74 MFVLLLVYPAIECWVGSAAPKDQSLLGEDLMTSDEEEDEH-----------TSSACKLKS 122
+ + + A LL D S+ + + S+ + +
Sbjct: 741 YLLQITAFVA--------------LLTLDFRRSESGRVDCIPCMSVELCFVSGSSTRQQR 786
Query: 123 YSEFSCRYLARQHARLITRPGVKMIVVFGFIGVLIASVS 161
RY+ HA + P VK VV F G+L AS++
Sbjct: 787 EPGILLRYMKNYHAPFLRIPAVKACVVAIFFGLLFASIA 825
>gi|412986209|emb|CCO17409.1| patched 2 [Bathycoccus prasinos]
Length = 1354
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 8 FAKYTSKNQFDSVKLNECTGIV---LRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNL 64
FAKY +S K + I+ RK G SI SSV AF ++ PIPA+R F++
Sbjct: 754 FAKYVGICHGESPKGSSARYIIRKAYRKAGASITASSVTNFAAFCLGAITPIPAVRAFSI 813
Query: 65 QLAILILFNMFVLLLVYPAI 84
Q+A+ ++ N ++++P +
Sbjct: 814 QVAMTVVCNYLAAVVIFPCL 833
>gi|344031761|gb|AEM77504.1| patched, partial [Drosophila pseudoobscura]
Length = 437
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 9/84 (10%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++T +A+ + Q T +L+ G SI+ + +FF+ + IP+ AL+
Sbjct: 261 IFMLTAAYAESNRREQ---------TSWILKLGGPSILFCACSTGRSFFAGAFIPVRALK 311
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
VF LQ AI++ N+ +LV+PAI
Sbjct: 312 VFCLQGAIVMCSNLGAAILVFPAI 335
>gi|336386206|gb|EGO27352.1| hypothetical protein SERLADRAFT_406479 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1380
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 29/145 (20%)
Query: 29 VLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVYPA----- 83
L K G SI+LSS+ ++VAF +L+P+PA+R F L A +L N + + V+ +
Sbjct: 815 TLAKMGPSILLSSITETVAFSLGALVPMPAVRNFALYAAGSVLLNAIMQVTVFVSAMAID 874
Query: 84 --------IECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACKLKSYSEFSCRYLARQH 135
++C+ P +LL + S L S + R++ R +
Sbjct: 875 LKRVEASRVDCFPCVRLPSRIALL------------DAPPSGSGLGSMA----RFIRRHY 918
Query: 136 ARLITRPGVKMIVVFGFIGVLIASV 160
A + +P VK IV+ F G + SV
Sbjct: 919 APFLLQPVVKSIVLLTFAGTFVLSV 943
>gi|336373372|gb|EGO01710.1| hypothetical protein SERLA73DRAFT_85531 [Serpula lacrymans var.
lacrymans S7.3]
Length = 1377
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 29/145 (20%)
Query: 29 VLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVYPA----- 83
L K G SI+LSS+ ++VAF +L+P+PA+R F L A +L N + + V+ +
Sbjct: 800 TLAKMGPSILLSSITETVAFSLGALVPMPAVRNFALYAAGSVLLNAIMQVTVFVSAMAID 859
Query: 84 --------IECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACKLKSYSEFSCRYLARQH 135
++C+ P +LL + S L S + R++ R +
Sbjct: 860 LKRVEASRVDCFPCVRLPSRIALL------------DAPPSGSGLGSMA----RFIRRHY 903
Query: 136 ARLITRPGVKMIVVFGFIGVLIASV 160
A + +P VK IV+ F G + SV
Sbjct: 904 APFLLQPVVKSIVLLTFAGTFVLSV 928
>gi|308811600|ref|XP_003083108.1| Membrane protein Patched/PTCH (ISS) [Ostreococcus tauri]
gi|116054986|emb|CAL57063.1| Membrane protein Patched/PTCH (ISS) [Ostreococcus tauri]
Length = 1148
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 41/77 (53%)
Query: 8 FAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLA 67
FA + ++ + +E L G +I L+S + AF +++L P+P ++ F LQ+A
Sbjct: 571 FASHAARTAVSEIGPDEIIKRALLDAGATITLTSAMNAAAFLASTLSPVPVIKNFGLQVA 630
Query: 68 ILILFNMFVLLLVYPAI 84
I + N +L++P I
Sbjct: 631 IAVACNYVAAVLIFPGI 647
>gi|145477123|ref|XP_001424584.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124391649|emb|CAK57186.1| unnamed protein product [Paramecium tetraurelia]
Length = 912
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 71/168 (42%), Gaps = 34/168 (20%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
MF+IT F K + E G L + G SI ++++C+++AF S+ +PAL+
Sbjct: 367 MFIITHQFKKQKHPT------IQERMGNTLEQVGPSITIAAICETLAFLVGSMTKMPALQ 420
Query: 61 VFNLQLAILILFNMFVLLLVYPAIECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSS---A 117
F +Q A+ + + F+ + ++ A W DEE +H
Sbjct: 421 SFCIQAAVGVFIDYFLQITMFVAFLTW-------------------DEERKKHKRYDLIV 461
Query: 118 CKLKSYSEFSCR------YLARQHARLITRPGVKMIVVFGFIGVLIAS 159
CK +F + + ++RL+ P ++ + F+ + + S
Sbjct: 462 CKQDINYQFRENRKLIQTFFKKTYSRLLQNPICIIMTIIIFVALFVIS 509
>gi|392568878|gb|EIW62052.1| multidrug efflux transporter AcrB transmembrane domain-containing
protein [Trametes versicolor FP-101664 SS1]
Length = 1400
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 68/145 (46%), Gaps = 29/145 (20%)
Query: 29 VLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVYPA----- 83
L K G SI+LS+V ++ AF +L+P+PA+R F L A + N + + V+ +
Sbjct: 823 TLAKMGPSILLSTVTETTAFALGALVPMPAVRNFALYAAGSVFLNAVLQVTVFVSALVVD 882
Query: 84 --------IECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACKLKSYSEFSCRYLARQH 135
++C P +LL E S L F R++ +++
Sbjct: 883 LRRVEASRVDCVPCLRMPPRIALL------------EAPPSNSGLG----FLARFIRKRY 926
Query: 136 ARLITRPGVKMIVVFGFIGVLIASV 160
A + +P VK +V+ GF G+L+AS+
Sbjct: 927 APFLLKPVVKGLVLLGFGGILVASI 951
>gi|308495570|ref|XP_003109973.1| CRE-PTC-3 protein [Caenorhabditis remanei]
gi|308244810|gb|EFO88762.1| CRE-PTC-3 protein [Caenorhabditis remanei]
Length = 1263
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 45/58 (77%)
Query: 27 GIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVYPAI 84
G++L++TG+S++L+S+ +AF S ++PIPALR F Q AIL+LFN+ L+ ++PA+
Sbjct: 618 GVLLKETGMSVMLTSINNILAFISGYVLPIPALRSFCSQTAILLLFNLIFLMFIFPAM 675
>gi|47198640|emb|CAG14178.1| unnamed protein product [Tetraodon nigroviridis]
Length = 143
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 42/64 (65%), Gaps = 6/64 (9%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+ F++ T +N+ + + EC L++TG S+ L+S+ AFF A+LIPIPALR
Sbjct: 70 VFLLAHAFSE-TGQNKRIAFR-GEC----LKRTGASVALTSISNVTAFFMAALIPIPALR 123
Query: 61 VFNL 64
F+L
Sbjct: 124 AFSL 127
>gi|358340380|dbj|GAA48285.1| patched 1 protein [Clonorchis sinensis]
Length = 1916
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 36/59 (61%)
Query: 26 TGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVYPAI 84
+ +VL + G S++ ++ S AFFSA+ IPIP +R F LQ L+L + LV+P +
Sbjct: 625 SALVLAEHGPSLLFGTIAMSGAFFSAAYIPIPLMRQFCLQAGTLVLIQSASVFLVFPCL 683
>gi|344031700|gb|AEM77475.1| patched, partial [Drosophila ananassae]
Length = 448
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 47/84 (55%), Gaps = 9/84 (10%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++T +A+ + Q T +L+K G SI+ + + +FF+ + I + AL+
Sbjct: 261 IFMLTAAYAESNRREQ---------TSWILKKVGPSILFGACSTAGSFFAGAFIRVRALK 311
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
VF LQ AI++ N+ +L +PAI
Sbjct: 312 VFCLQAAIVMCSNLAAAILEFPAI 335
>gi|255572430|ref|XP_002527152.1| conserved hypothetical protein [Ricinus communis]
gi|223533491|gb|EEF35234.1| conserved hypothetical protein [Ricinus communis]
Length = 584
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 7/153 (4%)
Query: 11 YTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILI 70
+ K Q + L E L + G SI L+S+ + +AF S IP+PA RVF++ A+ +
Sbjct: 6 HAVKRQSLEIALEERISNALVEVGPSITLASLSEILAFAVGSFIPMPACRVFSMFAALAV 65
Query: 71 LFNMFVLLLVYPAIECWVGSAAPKDQ--SLLGEDLMTSDEEEDEHTSSACKLKSYSEFSC 128
L + + + + A+ + A ++ L +S EE +E +
Sbjct: 66 LLDFLLQVTAFVALIVFDCKRAEDNRIDCFPCIKLSSSSEEMNEGV-----YQRRPGLLA 120
Query: 129 RYLARQHARLITRPGVKMIVVFGFIGVLIASVS 161
RY+ HA ++ GVK++V+ F+ +AS++
Sbjct: 121 RYMKEVHAPILGLWGVKIVVIAVFVAFALASIA 153
>gi|344031759|gb|AEM77503.1| patched, partial [Drosophila pseudoananassae]
Length = 445
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++T +A+ + Q T +L+ G SI+ + +FF+ + I +PAL+
Sbjct: 261 IFMLTAAYAESNRREQ---------TSWILKLVGPSILFGACSTGGSFFAGAFIRVPALK 311
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
VF L AI++ N+ +L +PAI
Sbjct: 312 VFCLHAAIVMCSNLAAAILDFPAI 335
>gi|341901332|gb|EGT57267.1| hypothetical protein CAEBREN_32438 [Caenorhabditis brenneri]
Length = 1371
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 51/74 (68%), Gaps = 5/74 (6%)
Query: 15 NQFDSVKLNECT----GIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILI 70
+ +D + +N C GI+L++TG+S++L+S +AF S ++PIPALR F Q AIL+
Sbjct: 713 HNYDEI-INICNKNEIGILLKETGMSVMLTSTNNILAFISGYVLPIPALRSFCSQTAILL 771
Query: 71 LFNMFVLLLVYPAI 84
LFN+ L+ ++PA+
Sbjct: 772 LFNLLFLMFIFPAM 785
>gi|341877313|gb|EGT33248.1| hypothetical protein CAEBREN_28944 [Caenorhabditis brenneri]
Length = 2377
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 51/74 (68%), Gaps = 5/74 (6%)
Query: 15 NQFDSVKLNECT----GIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILI 70
+ +D + +N C GI+L++TG+S++L+S +AF S ++PIPALR F Q AIL+
Sbjct: 735 HNYDEI-INICNKNEIGILLKETGMSVMLTSTNNILAFISGYVLPIPALRSFCSQTAILL 793
Query: 71 LFNMFVLLLVYPAI 84
LFN+ L+ ++PA+
Sbjct: 794 LFNLLFLMFIFPAM 807
>gi|356517933|ref|XP_003527640.1| PREDICTED: niemann-Pick C1 protein-like [Glycine max]
Length = 1283
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 68/132 (51%), Gaps = 6/132 (4%)
Query: 30 LRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVYPAIECWVG 89
L + G SI L+SV + +AF S I +PA+RVF++ A+ +L + + + + A+ +
Sbjct: 729 LVEVGPSITLASVSEVLAFAVGSFISMPAIRVFSMFAALAVLLDFLLQVTAFVAL-IVLD 787
Query: 90 SAAPKDQSLLGEDLMTSDEEEDEHTSSACKLKSYSEFSCRYLARQHARLITRPGVKMIVV 149
S +D+ + + + D T + RY+ HA +++ GVK++V+
Sbjct: 788 SLRAEDKRVDCFPCIKVHADPDTGTG-----RRKPGLLARYMKEVHAPILSIWGVKIVVI 842
Query: 150 FGFIGVLIASVS 161
F+G +AS++
Sbjct: 843 AIFVGFALASIA 854
>gi|395328762|gb|EJF61152.1| multidrug efflux transporter AcrB transmembrane domain-containing
protein [Dichomitus squalens LYAD-421 SS1]
Length = 1400
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 66/145 (45%), Gaps = 29/145 (20%)
Query: 29 VLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVYPA----- 83
L K G SI+LS+V ++ AF +L+P+PA+R F L A + N + + V+ +
Sbjct: 823 TLAKMGPSILLSTVTETTAFALGALVPMPAVRNFALYAAGSVFLNALLQVTVFVSALVVD 882
Query: 84 --------IECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACKLKSYSEFSCRYLARQH 135
++C+ P +LL E S L F R + + +
Sbjct: 883 LKRVEASRVDCFPCVRLPPRIALL------------EAPPSGSGLG----FLARVIRKYY 926
Query: 136 ARLITRPGVKMIVVFGFIGVLIASV 160
A L+ +P K +V+ F G+L+ASV
Sbjct: 927 APLLLKPLAKGVVLLTFGGMLVASV 951
>gi|170086992|ref|XP_001874719.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164649919|gb|EDR14160.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1341
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 73/171 (42%), Gaps = 35/171 (20%)
Query: 9 AKYTSKNQFDSVKL------NECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVF 62
+ + S N D+ + E G L K G SI+LS++ ++ AF +L+P+PA+R F
Sbjct: 740 SPFESTNDVDASSMPLYLPAEERVGRALAKMGPSILLSTITETTAFALGALVPMPAVRNF 799
Query: 63 NLQLAILILFNMFVLLLVYPA-------------IECWVGSAAPKDQSLLGEDLMTSDEE 109
L A + N + + V+ + ++C P +L L
Sbjct: 800 ALYAAGSVFLNATLQVTVFVSALLLDLKRVESSRVDCLPCIRLPPRITLPDAPL------ 853
Query: 110 EDEHTSSACKLKSYSEFSCRYLARQHARLITRPGVKMIVVFGFIGVLIASV 160
S L + R++ R +A + +P VK IV+ F GV +ASV
Sbjct: 854 ------SGGGLGRVA----RFIRRYYAPFLLKPVVKGIVLLTFAGVFVASV 894
>gi|365985383|ref|XP_003669524.1| hypothetical protein NDAI_0C06220 [Naumovozyma dairenensis CBS 421]
gi|343768292|emb|CCD24281.1| hypothetical protein NDAI_0C06220 [Naumovozyma dairenensis CBS 421]
Length = 1201
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FLIT + + +++ + +NE + + SIILS +C++ F A+L+ +PA+R
Sbjct: 657 IFLITHEYDRL--RDRMPDIPINEIIIKTISRISPSIILSFLCQAGCFSIAALVSMPAVR 714
Query: 61 VFNLQLAILILFNMFVLLLVY 81
F L A+ +LFN+ + L Y
Sbjct: 715 NFALYSAVALLFNVILQLTAY 735
>gi|384253197|gb|EIE26672.1| multidrug efflux transporter AcrB transmembrane domain-containing
protein [Coccomyxa subellipsoidea C-169]
Length = 1321
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 73/155 (47%), Gaps = 17/155 (10%)
Query: 15 NQFD----SVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILI 70
N+ D S+ L E G L G SI L++ + VAF + +PA+R F++ A+ +
Sbjct: 740 NELDRTDASLPLPERLGRTLAAAGPSISLAATAEVVAFGLGAFSTMPAVRNFSICAALAV 799
Query: 71 LFNM------FVLLLVYPAIECWVG--SAAPKDQSLLGEDLMTSDEEEDEHTSSACKLKS 122
L + FV LL A G AP Q L + L + + + H SS L +
Sbjct: 800 LLDFCLQVTAFVALLALDAQRIREGRLDVAPCIQ-LPPKYLGAAADGHNGHGSSEEPLLA 858
Query: 123 YSEFSCRYLARQHARLITRPGVKMIVVFGFIGVLI 157
RY+A HA L+ +P V+ +V+ F+G+ +
Sbjct: 859 LQ----RYMAEVHAPLLLKPAVQGVVLAVFLGLFL 889
>gi|255539230|ref|XP_002510680.1| hedgehog receptor, putative [Ricinus communis]
gi|223551381|gb|EEF52867.1| hedgehog receptor, putative [Ricinus communis]
Length = 1235
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 64/132 (48%), Gaps = 3/132 (2%)
Query: 30 LRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVYPAIECWVG 89
L + G SI L+S+ + +AF S IP+PA RVF++ A+ +L + + + + A+ +
Sbjct: 684 LVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMFAALAVLLDFLLQVTAFVALIVFDF 743
Query: 90 SAAPKDQSLLGEDLMTSDEEEDEHTSSACKLKSYSEFSCRYLARQHARLITRPGVKMIVV 149
A + L TS D + RY+ HA +++ GVK++V+
Sbjct: 744 LRAEDKRVDCFPCLKTSSSYADSDKGIGGRRPG---LLARYMKEVHAPVLSLWGVKIVVI 800
Query: 150 FGFIGVLIASVS 161
FI +ASV+
Sbjct: 801 SIFIAFALASVA 812
>gi|390600882|gb|EIN10276.1| multidrug efflux transporter AcrB transmembrane domain-containing
protein [Punctularia strigosozonata HHB-11173 SS5]
Length = 1407
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 65/145 (44%), Gaps = 29/145 (20%)
Query: 29 VLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVYPA----- 83
L K G SI+LS++ ++VAF +L+P+PA+R F L A ++ N F+ + V+ +
Sbjct: 830 ALAKMGPSILLSTITETVAFALGALVPMPAVRNFALYAAGSVMLNAFLQVTVFVSALVLD 889
Query: 84 --------IECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACKLKSYSEFSCRYLARQH 135
++C P +LL + S L +F + R +
Sbjct: 890 LRRVEASRVDCLPCIRLPPRIALL------------DAPPSGSGLGRIGKF----IRRHY 933
Query: 136 ARLITRPGVKMIVVFGFIGVLIASV 160
A + +P VK V+ F GV + SV
Sbjct: 934 APFLLKPIVKGSVLLSFAGVFVLSV 958
>gi|356509590|ref|XP_003523530.1| PREDICTED: niemann-Pick C1 protein-like [Glycine max]
Length = 1257
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 68/132 (51%), Gaps = 6/132 (4%)
Query: 30 LRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVYPAIECWVG 89
L + G SI L+SV + +AF S I +PA+RVF++ A+ +L + + + + A+ +
Sbjct: 703 LVEVGPSITLASVSEVLAFAVGSFISMPAIRVFSMFAALAVLLDFLLQVTAFVAL-IVLD 761
Query: 90 SAAPKDQSLLGEDLMTSDEEEDEHTSSACKLKSYSEFSCRYLARQHARLITRPGVKMIVV 149
S +D+ + + + D T + RY+ HA +++ GVK++V+
Sbjct: 762 SLRAEDKRVDCFPCIKVHADPDIGTG-----RRKPGLLARYMKEVHAPILSIWGVKIVVI 816
Query: 150 FGFIGVLIASVS 161
F+G +AS++
Sbjct: 817 AIFVGFALASIA 828
>gi|126723431|ref|NP_001075540.1| Niemann-Pick C1 protein precursor [Oryctolagus cuniculus]
gi|6581072|gb|AAF18444.1|AF202730_1 Niemann-Pick type C1 disease protein [Oryctolagus cuniculus]
Length = 1286
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 80/167 (47%), Gaps = 23/167 (13%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++ +T Y + L++ G VL + SI LSS ++VAFF L +PA+
Sbjct: 711 IFILVQT---YQRDERLQGETLDQQLGRVLGEVAPSIFLSSFAETVAFFLGGLSVMPAVH 767
Query: 61 VFNLQLAILILFNMFVLLLVYPAIECWVGSAAPKDQSLLGEDLMTSDEEEDE------HT 114
F+L A + +F F+L I C+V SLLG D+ ++ + +
Sbjct: 768 TFSL-FAGMAVFIDFLL-----QITCFV--------SLLGLDIKRQEKNQLDVLCCFRGA 813
Query: 115 SSACKLKSYSEFSCRYLARQHARLITRPGVKMIVVFGFIGVLIASVS 161
+ +++ + R+ ++ L+ + ++ IV+ F+GVL S++
Sbjct: 814 EAGTSIQASESYLFRFFKNSYSPLLLKDWMRPIVIAVFVGVLSFSIA 860
>gi|218195379|gb|EEC77806.1| hypothetical protein OsI_16991 [Oryza sativa Indica Group]
Length = 1257
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 68/154 (44%), Gaps = 16/154 (10%)
Query: 14 KNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFN 73
K Q D + L E L + G SI L+S+ + +AF +++ P+PA RVF++ A+ +L +
Sbjct: 655 KRQPDGLDLEERISTALVEVGPSITLASLAEVLAFAVSAINPMPATRVFSMFAALAVLLD 714
Query: 74 M------FVLLLVYPAIECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACKLKSYSEFS 127
FV L+V G + + ++ SD +
Sbjct: 715 FLLQVSAFVALIVLDFRRAQDGRIDCMPCARVKSSVVASDGGNHQGL----------PLL 764
Query: 128 CRYLARQHARLITRPGVKMIVVFGFIGVLIASVS 161
RY+ HA ++ VK +V+ F+G AS++
Sbjct: 765 ARYMKNVHAPILGYRAVKFVVIAVFVGFSFASIA 798
>gi|432917243|ref|XP_004079470.1| PREDICTED: niemann-Pick C1 protein-like [Oryzias latipes]
Length = 1271
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 86/172 (50%), Gaps = 30/172 (17%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F+I +T + ++ + +L++ G +L S+ LSS+ ++VAFF +L +PA+R
Sbjct: 703 IFIIVQTLQR---DDRMPNEELHQQIGRILGDVAPSMFLSSLSETVAFFLGALSIMPAVR 759
Query: 61 VFNLQLAILILFNMFVLLLVYPAIECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSAC-- 118
F+L A L +F F+L I C+V SLLG D + +E C
Sbjct: 760 TFSL-FAGLAIFIDFLL-----QISCFV--------SLLGLD---AKRQERNRLDICCCV 802
Query: 119 KLKSYSEFSC-----RYLARQHARLITRPGVKMIVVFGFIGVL---IASVSR 162
KL + R+ + +A +I + V+ I+V F+G+L IA+V++
Sbjct: 803 KLPESQQIKSDGILFRFFKKIYAPVILQEWVRPIIVAVFVGMLSFSIAAVNK 854
>gi|168000795|ref|XP_001753101.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695800|gb|EDQ82142.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1262
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 67/156 (42%), Gaps = 20/156 (12%)
Query: 14 KNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFN 73
K Q ++ L G+ L + G SI L+SV + +AF P+PA RVF+L A+ +L +
Sbjct: 650 KRQDLNLNLETRVGLALAEVGPSITLASVAEVLAFTVGISTPMPACRVFSLFAAVAVLLD 709
Query: 74 MFVLLLVYPAI--------ECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACKLKSYSE 125
+ + + A+ E P E + +++ +
Sbjct: 710 YLLQITAFVAVLTLDFRRSESGRVDCVPCIHVGRKEPGLPNEQRHNPGLRQ--------- 760
Query: 126 FSCRYLARQHARLITRPGVKMIVVFGFIGVLIASVS 161
RY+ HA ++ P VK V+ F G+L AS++
Sbjct: 761 ---RYMKNYHAPFLSIPAVKASVLAIFFGLLFASIA 793
>gi|403265185|ref|XP_003924829.1| PREDICTED: niemann-Pick C1 protein [Saimiri boliviensis
boliviensis]
Length = 1227
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 75/160 (46%), Gaps = 26/160 (16%)
Query: 11 YTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILI 70
Y + L++ G VL + S++LSS ++VAFF +L +PA+ F+L A L
Sbjct: 659 YQRDERLQGETLDQQLGRVLGEVAPSMLLSSFSETVAFFLGALSMMPAVHTFSL-FAGLA 717
Query: 71 LFNMFVLLLVYPAIECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACKLKSYSEF---- 126
+F F+L I C+V SLLG D+ +E C +K +
Sbjct: 718 VFIDFLL-----QITCFV--------SLLGLDI---KRQEKNRLDIFCCIKGVEDGTSVQ 761
Query: 127 ---SC--RYLARQHARLITRPGVKMIVVFGFIGVLIASVS 161
SC R+ +A L+ + ++ IVV F+GVL S++
Sbjct: 762 ASESCLFRFFKNSYAPLLLKDWMRPIVVAVFVGVLSFSIA 801
>gi|281338275|gb|EFB13859.1| hypothetical protein PANDA_000443 [Ailuropoda melanoleuca]
Length = 1231
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 79/170 (46%), Gaps = 29/170 (17%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++ +T Y + L++ G VL + S+ LSS ++VAFF +L +PA+
Sbjct: 683 IFILVQT---YQRDERLQGETLDQQLGRVLGEVAPSMFLSSFSEAVAFFLGALSKMPAVH 739
Query: 61 VFNLQLAILILFNMFVLLLVYPAIECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACKL 120
F+L + +L + + I C+V SLLG D+ +E+ C +
Sbjct: 740 TFSLFAGMAVLIDFLL------QITCFV--------SLLGLDI---KRQENNRLDVVCCV 782
Query: 121 KSYSEF-------SC--RYLARQHARLITRPGVKMIVVFGFIGVLIASVS 161
+ + SC R+ ++ L+ + ++ IVV F+GVL S++
Sbjct: 783 RGSEDGTSVQASESCLFRFFKNSYSPLLLKEWMRPIVVAVFVGVLSFSIA 832
>gi|116309699|emb|CAH66746.1| H0409D10.4 [Oryza sativa Indica Group]
Length = 1372
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 68/154 (44%), Gaps = 16/154 (10%)
Query: 14 KNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFN 73
K Q D + L E L + G SI L+S+ + +AF +++ P+PA RVF++ A+ +L +
Sbjct: 697 KRQPDGLDLEERISTALVEVGPSITLASLAEVLAFAVSAINPMPATRVFSMFAALAVLLD 756
Query: 74 M------FVLLLVYPAIECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACKLKSYSEFS 127
FV L+V G + + ++ SD +
Sbjct: 757 FLLQVSAFVALIVLDFRRAQDGRIDCMPCARVKSSVVASDGGNHQGL----------PLL 806
Query: 128 CRYLARQHARLITRPGVKMIVVFGFIGVLIASVS 161
RY+ HA ++ VK +V+ F+G AS++
Sbjct: 807 ARYMKNVHAPILGYRAVKFVVIAVFVGFSFASIA 840
>gi|345195206|ref|NP_001230804.1| Niemann-Pick C1 protein precursor [Danio rerio]
Length = 1271
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 82/167 (49%), Gaps = 25/167 (14%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F+I +T+ + + +L++ G +L S+ LSS ++VAFF +L +PA+R
Sbjct: 699 IFIIVQTYQR---DERMPEEELHQQIGRILGDVAPSMFLSSFSETVAFFLGALSTMPAVR 755
Query: 61 VFNLQLAILILFNMFVLLLVYPAIECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSAC-K 119
F+L A L +F F+L I C+V SLLG D+ +E + C K
Sbjct: 756 TFSL-FAGLAIFIDFLL-----QISCFV--------SLLGLDI--KRQEANRMDILCCVK 799
Query: 120 LKSYSE-----FSCRYLARQHARLITRPGVKMIVVFGFIGVLIASVS 161
L E + R+ + +A I + V+ +VV F+G+L S++
Sbjct: 800 LSDGQEEKSEGWLFRFFKKIYAPFILKDWVRPLVVAVFVGMLSFSIA 846
>gi|301753717|ref|XP_002912704.1| PREDICTED: Niemann-Pick C1 protein-like [Ailuropoda melanoleuca]
Length = 1276
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 79/170 (46%), Gaps = 29/170 (17%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++ +T Y + L++ G VL + S+ LSS ++VAFF +L +PA+
Sbjct: 702 IFILVQT---YQRDERLQGETLDQQLGRVLGEVAPSMFLSSFSEAVAFFLGALSKMPAVH 758
Query: 61 VFNLQLAILILFNMFVLLLVYPAIECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACKL 120
F+L + +L + + I C+V SLLG D+ +E+ C +
Sbjct: 759 TFSLFAGMAVLIDFLL------QITCFV--------SLLGLDI---KRQENNRLDVVCCV 801
Query: 121 KSYSEF-------SC--RYLARQHARLITRPGVKMIVVFGFIGVLIASVS 161
+ + SC R+ ++ L+ + ++ IVV F+GVL S++
Sbjct: 802 RGSEDGTSVQASESCLFRFFKNSYSPLLLKEWMRPIVVAVFVGVLSFSIA 851
>gi|38345936|emb|CAD41413.2| OSJNBb0078D11.11 [Oryza sativa Japonica Group]
Length = 1361
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 68/154 (44%), Gaps = 16/154 (10%)
Query: 14 KNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFN 73
K Q D + L E L + G SI L+S+ + +AF +++ P+PA RVF++ A+ +L +
Sbjct: 697 KRQPDGLDLEERISTALVEVGPSITLASLAEVLAFAVSAINPMPATRVFSMFAALAVLLD 756
Query: 74 M------FVLLLVYPAIECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACKLKSYSEFS 127
FV L+V G + + ++ SD +
Sbjct: 757 FLLQVSAFVALIVLDFRRAQDGRIDCMPCARVKSSVVASDGGNHQGL----------PLL 806
Query: 128 CRYLARQHARLITRPGVKMIVVFGFIGVLIASVS 161
RY+ HA ++ VK +V+ F+G AS++
Sbjct: 807 ARYMKNVHAPILGYRAVKFVVIAVFVGFSFASIA 840
>gi|222629372|gb|EEE61504.1| hypothetical protein OsJ_15793 [Oryza sativa Japonica Group]
Length = 1211
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 68/154 (44%), Gaps = 16/154 (10%)
Query: 14 KNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFN 73
K Q D + L E L + G SI L+S+ + +AF +++ P+PA RVF++ A+ +L +
Sbjct: 637 KRQPDGLDLEERISTALVEVGPSITLASLAEVLAFAVSAINPMPATRVFSMFAALAVLLD 696
Query: 74 M------FVLLLVYPAIECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACKLKSYSEFS 127
FV L+V G + + ++ SD +
Sbjct: 697 FLLQVSAFVALIVLDFRRAQDGRIDCMPCARVKSSVVASDGGNHQGL----------PLL 746
Query: 128 CRYLARQHARLITRPGVKMIVVFGFIGVLIASVS 161
RY+ HA ++ VK +V+ F+G AS++
Sbjct: 747 ARYMKNVHAPILGYRAVKFVVIAVFVGFSFASIA 780
>gi|297723359|ref|NP_001174043.1| Os04g0563801 [Oryza sativa Japonica Group]
gi|255675688|dbj|BAH92771.1| Os04g0563801 [Oryza sativa Japonica Group]
Length = 963
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 68/154 (44%), Gaps = 16/154 (10%)
Query: 14 KNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFN 73
K Q D + L E L + G SI L+S+ + +AF +++ P+PA RVF++ A+ +L +
Sbjct: 511 KRQPDGLDLEERISTALVEVGPSITLASLAEVLAFAVSAINPMPATRVFSMFAALAVLLD 570
Query: 74 M------FVLLLVYPAIECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACKLKSYSEFS 127
FV L+V G + + ++ SD +
Sbjct: 571 FLLQVSAFVALIVLDFRRAQDGRIDCMPCARVKSSVVASDGGNHQGL----------PLL 620
Query: 128 CRYLARQHARLITRPGVKMIVVFGFIGVLIASVS 161
RY+ HA ++ VK +V+ F+G AS++
Sbjct: 621 ARYMKNVHAPILGYRAVKFVVIAVFVGFSFASIA 654
>gi|405952384|gb|EKC20203.1| Niemann-Pick C1 protein [Crassostrea gigas]
Length = 1285
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 41/64 (64%)
Query: 21 KLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLV 80
+L + G +L K G S++L+S +S+AFF +L +PA+RVF+L A+ +L + + V
Sbjct: 699 ELEDRIGRLLGKVGPSMLLASCSESLAFFLGALTDMPAVRVFSLYSAMAVLLDFLFQVTV 758
Query: 81 YPAI 84
+ A+
Sbjct: 759 FVAV 762
>gi|334265227|gb|AEG75264.1| Niemann-Pick disease type C1 protein [Danio rerio]
Length = 1277
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 25/167 (14%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F+I +T Y + +L++ G +L S+ LSS ++VAFF +L +PA+R
Sbjct: 704 IFIIVQT---YQRDERMPEEELHQQIGRILGDVAPSMFLSSFSETVAFFLGALSTMPAVR 760
Query: 61 VFNLQLAILILFNMFVLLLVYPAIECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSAC-K 119
F+L A L +F F+L I C+V SLLG D+ +E + C K
Sbjct: 761 TFSL-FAGLAIFIDFLL-----QISCFV--------SLLGLDI--KRQEANRMDILCCVK 804
Query: 120 LKSYSE-----FSCRYLARQHARLITRPGVKMIVVFGFIGVLIASVS 161
L E + R+ + +A I + V+ +VV F+G+L S++
Sbjct: 805 LSDGQEEKSEGWLFRFFKKIYAPFILKDWVRPLVVAVFVGMLSFSIA 851
>gi|194214517|ref|XP_001490228.2| PREDICTED: niemann-Pick C1 protein [Equus caballus]
Length = 1293
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 78/167 (46%), Gaps = 23/167 (13%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++ +T Y + L++ G VL + S+ LSS ++VAFF +L +PA+
Sbjct: 718 IFILVQT---YQRDERLQGETLDQQLGRVLGEVAPSMFLSSFSETVAFFLGALSVMPAVH 774
Query: 61 VFNLQLAILILFNMFVLLLVYPAIECWVGSAAPKDQSLLGEDLMTSDEEEDE------HT 114
F+L + +L + + I C+V SLLG D+ ++ + +
Sbjct: 775 TFSLFAGLAVLIDFLL------QITCFV--------SLLGLDIKRQEKNRLDVLCCLRGS 820
Query: 115 SSACKLKSYSEFSCRYLARQHARLITRPGVKMIVVFGFIGVLIASVS 161
+++ F R+ ++ L+ + ++ IV+ F+GVL S++
Sbjct: 821 EDGTSVQASESFLFRFFRNSYSPLLLKDWMRPIVIAVFVGVLSFSIA 867
>gi|390473919|ref|XP_002757167.2| PREDICTED: niemann-Pick C1 protein [Callithrix jacchus]
Length = 1352
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 74/160 (46%), Gaps = 26/160 (16%)
Query: 11 YTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILI 70
Y + L++ G VL + S+ LSS ++VAFF +L +PA+ F+L A L
Sbjct: 784 YQRDERLQGETLDQQLGRVLGEVAPSMFLSSFSETVAFFLGALSVMPAVHTFSL-FAGLA 842
Query: 71 LFNMFVLLLVYPAIECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACKLKSYSEF---- 126
+F F+L I C+V SLLG D+ +E C +K +
Sbjct: 843 VFIDFLL-----QITCFV--------SLLGLDI---KRQEKNRLDIFCCIKGVEDGTSVQ 886
Query: 127 ---SC--RYLARQHARLITRPGVKMIVVFGFIGVLIASVS 161
SC R+ +A L+ + ++ IVV F+GVL S++
Sbjct: 887 ASESCLFRFFKNSYAPLLLKDWMRPIVVAVFVGVLSFSIA 926
>gi|45201088|ref|NP_986658.1| AGL008Wp [Ashbya gossypii ATCC 10895]
gi|44985871|gb|AAS54482.1| AGL008Wp [Ashbya gossypii ATCC 10895]
Length = 1178
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+T + + T+ N S+ + + I +RK SI+ S VC++V F A+ + +PA+R
Sbjct: 638 IFLLTGEYDRTTAGNT--SLSIEDRILISVRKIAPSIVTSVVCQTVCFLLAAFVGMPAVR 695
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F L A + FN + + +I
Sbjct: 696 NFALYSAAALFFNFLFQITAFVSI 719
>gi|256077983|ref|XP_002575278.1| niemann-pick C1 (NPC1) [Schistosoma mansoni]
gi|350644618|emb|CCD60666.1| niemann-pick C1 (NPC1) [Schistosoma mansoni]
Length = 950
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 10/90 (11%)
Query: 1 MFLITKTFAKYTSKNQFDSVKL------NECTGIVLRKTGLSIILSSVCKSVAFFSASLI 54
+F++ F N + +KL +E G V G S++L+S+ +SVAFF +L
Sbjct: 277 IFILVHEFEHNQLNNLNEPIKLLVEDRISESMGSV----GPSMLLTSLSESVAFFCGALT 332
Query: 55 PIPALRVFNLQLAILILFNMFVLLLVYPAI 84
+PA+RVF L A+ I+FN + + + A+
Sbjct: 333 TMPAVRVFALYAAMAIVFNFLLQIFAFVAL 362
>gi|47523702|ref|NP_999487.1| Niemann-Pick C1 protein precursor [Sus scrofa]
gi|8134591|sp|P56941.1|NPC1_PIG RecName: Full=Niemann-Pick C1 protein; Flags: Precursor
gi|5690449|gb|AAD47090.1|AF169635_1 Niemann-Pick C disease protein [Sus scrofa]
Length = 1277
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 77/170 (45%), Gaps = 29/170 (17%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++ +T Y + L++ G VL + S+ LSS ++VAFF L +PA+
Sbjct: 702 IFILVQT---YQRDERLQGETLDQQLGRVLGEVAPSMFLSSFSETVAFFLGGLSVVPAVH 758
Query: 61 VFNLQLAILILFNMFVLLLVYPAIECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACKL 120
F+L + +L + + I C+V SLLG D+ +E C +
Sbjct: 759 TFSLFAGMAVLIDFLL------QITCFV--------SLLGLDI---KRQEKNRLDVVCCV 801
Query: 121 KSYSEF-------SC--RYLARQHARLITRPGVKMIVVFGFIGVLIASVS 161
+ + SC R+ +A L+ + ++ IV+ F+GVL S++
Sbjct: 802 QGAEDGAGVQASESCLFRFFKNSYAPLLLKDWMRPIVIAVFVGVLSFSIA 851
>gi|374109909|gb|AEY98814.1| FAGL008Wp [Ashbya gossypii FDAG1]
Length = 1178
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FL+T + + T+ N S+ + + I +RK SI+ S VC++V F A+ + +PA+R
Sbjct: 638 IFLLTGEYDRTTAGNT--SLSIEDRILISVRKIAPSIVTSVVCQTVCFLLAAFVGMPAVR 695
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F L A + FN + + +I
Sbjct: 696 NFALYSAAALFFNFLFQITAFVSI 719
>gi|147840467|emb|CAN68425.1| hypothetical protein VITISV_038862 [Vitis vinifera]
Length = 692
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 23/148 (15%)
Query: 30 LRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNM------FVLLLVYP- 82
L + G SI L+S+ + +AF S IP+PA RVF++ A+ +L + FV L+V+
Sbjct: 101 LVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMFAALAVLLDFLLQVTAFVALIVFDF 160
Query: 83 ------AIECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACKLKSYSEFSCRYLARQ-- 134
I+C+ P + SDE ++ E + Y+ ++
Sbjct: 161 MRAEDNRIDCFPCIKIPSSS-------VESDEGINQRKPGGLLAWYMQETTTEYIDKKKE 213
Query: 135 -HARLITRPGVKMIVVFGFIGVLIASVS 161
HA ++ GVK+ V+ F +AS++
Sbjct: 214 VHAPILGIWGVKIFVIAAFFAFTLASIA 241
>gi|313239278|emb|CBY14228.1| unnamed protein product [Oikopleura dioica]
Length = 922
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%)
Query: 14 KNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFN 73
+ + + L++ V K G S++L ++ ++ FF S+I +PA++VF + I ILFN
Sbjct: 279 EKRLEGESLDDLIARVFAKAGPSMLLCAMTEATVFFMGSVIDMPAIKVFAINAGIAILFN 338
Query: 74 MFVLLLVYPAI 84
+ + + AI
Sbjct: 339 FILQITAFLAI 349
>gi|312381245|gb|EFR27036.1| hypothetical protein AND_06484 [Anopheles darlingi]
Length = 1832
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 29/170 (17%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++ +T + T K + E G +L + G SI+L+SV +S FF L +PA+R
Sbjct: 893 IFILVQTHQRDTKK---PTETHAEHIGRILGRVGPSILLTSVSESCCFFLGGLSDMPAVR 949
Query: 61 VFNLQLAILILFNMFVLLLVYPAIECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACKL 120
F L + +L + F+ I C+V SLL D + + D C L
Sbjct: 950 AFALYAGMALLIDFFL------QITCFV--------SLLALDTI---RQADNRLDVLCFL 992
Query: 121 KSYSE---------FSCRYLARQHARLITRPGVKMIVVFGFIGVLIASVS 161
+ + ++ + + R V++ V+ GF G L +S++
Sbjct: 993 RGSKKDMPGNLSEGLLYKFFKSIYVPFVMRKSVRVAVMIGFFGWLCSSIA 1042
>gi|195050575|ref|XP_001992922.1| GH13378 [Drosophila grimshawi]
gi|193899981|gb|EDV98847.1| GH13378 [Drosophila grimshawi]
Length = 1021
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 77/171 (45%), Gaps = 27/171 (15%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECT----GIVLRKTGLSIILSSVCKSVAFFSASLIPI 56
+F++ +T+ Q D + +E T G VL G S++L+SV +S FF L +
Sbjct: 700 IFILVQTY-------QRDQRRTDETTEQQVGRVLGHVGPSMLLTSVSESCCFFLGGLSDM 752
Query: 57 PALRVFNLQLAILILFNMFVLLLVYPAIECWVG----SAAPKDQSLLGEDLMTSDEEED- 111
PA++ F L + +L + F+L I C+VG +D++ L ++ D
Sbjct: 753 PAVKAFALYAGVALLID-FIL-----QITCFVGLFTLDTKRRDENRLDICCFIKCKKSDV 806
Query: 112 EHTSSACKLKSYSEFSCRYLARQHARLITRPGVKMIVVFGFIGVLIASVSR 162
H S K + +L ++ R I MI+ FG + IASV +
Sbjct: 807 VHNSEGLLYKFFKSVYVPFLMKKVVRAIV-----MIIFFGLLCASIASVPK 852
>gi|145498162|ref|XP_001435069.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124402198|emb|CAK67672.1| unnamed protein product [Paramecium tetraurelia]
Length = 903
Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 12/85 (14%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
MF+IT + K + E G L++ G SI ++++C+++AF SL +PAL+
Sbjct: 360 MFIITHNYKKQKHPT------VPERMGHTLKQVGPSITIAAICETLAFLVGSLTKMPALQ 413
Query: 61 VFNLQLAI------LILFNMFVLLL 79
F +Q A+ L+ MFV L
Sbjct: 414 SFCIQAAVGVFIDYLLQITMFVAFL 438
>gi|256073803|ref|XP_002573217.1| patched 1 [Schistosoma mansoni]
gi|360044706|emb|CCD82254.1| putative patched 1 [Schistosoma mansoni]
Length = 1692
Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%)
Query: 29 VLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVYPAI 84
VL G S++ ++ + AFFSA+ IP+P +R F LQ ILI+ + +++P +
Sbjct: 594 VLSVHGPSLLFGTISLAGAFFSAAFIPVPLIRQFCLQAGILIIVQSISVFMLFPVL 649
>gi|313214498|emb|CBY40855.1| unnamed protein product [Oikopleura dioica]
Length = 609
Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 22 LNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVY 81
L++ V K G S++L ++ ++ FF S+I +PA++VF + I ILFN + + +
Sbjct: 300 LDDLIARVFAKAGPSMLLCAMTEATVFFMGSVIDMPAIKVFAINAGIAILFNFILQITAF 359
Query: 82 PAI 84
AI
Sbjct: 360 LAI 362
>gi|313212458|emb|CBY36433.1| unnamed protein product [Oikopleura dioica]
Length = 1495
Score = 42.4 bits (98), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%)
Query: 14 KNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFN 73
+ + + L++ V K G S++L ++ ++ FF S+I +PA++VF + I ILFN
Sbjct: 895 EKRLEGESLDDLIARVFAKAGPSMLLCAMTEATVFFMGSVIDMPAIKVFAINAGIAILFN 954
Query: 74 MFVLLLVYPAI 84
+ + + AI
Sbjct: 955 FILQITAFLAI 965
>gi|426253685|ref|XP_004020523.1| PREDICTED: LOW QUALITY PROTEIN: niemann-Pick C1 protein-like [Ovis
aries]
Length = 1285
Score = 42.0 bits (97), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 77/167 (46%), Gaps = 23/167 (13%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++ +T Y + L++ G VL + S+ LSS ++VAFF L +PA+
Sbjct: 710 IFILVQT---YQRDERLQGETLDQQVGRVLGEVAPSMFLSSFAETVAFFLGGLSVMPAVH 766
Query: 61 VFNLQLAILILFNMFVLLLVYPAIECWVGSAAPKDQSLLGEDLMTSDEEE------DEHT 114
F+L + +L + + I C+V SLLG D+ ++ + E
Sbjct: 767 TFSLFAGMAVLIDFLL------QITCFV--------SLLGLDIKRQEKNQLDVLCCVEGA 812
Query: 115 SSACKLKSYSEFSCRYLARQHARLITRPGVKMIVVFGFIGVLIASVS 161
+ +++ R+ +A L+ + ++ +VV F+GVL S++
Sbjct: 813 ADDTGVQASESCLFRFFRNSYAPLLLKDWMRPLVVAVFVGVLSFSIA 859
>gi|303284319|ref|XP_003061450.1| resistance-nodulation-cell division superfamily [Micromonas pusilla
CCMP1545]
gi|226456780|gb|EEH54080.1| resistance-nodulation-cell division superfamily [Micromonas pusilla
CCMP1545]
Length = 559
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 48/88 (54%), Gaps = 7/88 (7%)
Query: 37 IILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVYPAIECWVGSAAPKDQ 96
++L+S +VAF S+++IPI +RVF++ + +++F+ + ++ A+ W A+ + Q
Sbjct: 1 MLLTSTTTAVAFASSAIIPIAPIRVFSIFMCAMVIFDYIYDITIFAAMLAWTHDASLRAQ 60
Query: 97 SLLGE-------DLMTSDEEEDEHTSSA 117
+ G+ DL E+ E SA
Sbjct: 61 NNGGKGYSLICFDLFAFYEKRKEQKGSA 88
>gi|145501349|ref|XP_001436656.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124403798|emb|CAK69259.1| unnamed protein product [Paramecium tetraurelia]
Length = 912
Score = 42.0 bits (97), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 12/85 (14%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
MF+IT + K + E G L++ G SI ++++C+++AF SL +PAL+
Sbjct: 367 MFIITHNYKKQKHPT------VPERMGQTLKQVGPSITIAAICETLAFLVGSLTKMPALQ 420
Query: 61 VFNLQLAI------LILFNMFVLLL 79
F +Q A+ L+ MFV L
Sbjct: 421 SFCIQAAVGVFIDYLLQITMFVAFL 445
>gi|393215940|gb|EJD01431.1| multidrug efflux transporter AcrB transmembrane domain-containing
protein [Fomitiporia mediterranea MF3/22]
Length = 1397
Score = 42.0 bits (97), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 66/144 (45%), Gaps = 29/144 (20%)
Query: 30 LRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVYPA------ 83
L K G SI+LSS+ + AF +L+P+PA+R F L A + N + + V+ +
Sbjct: 824 LAKMGPSILLSSITEVTAFALGALVPMPAVRNFALYAAGSVFLNAILQVTVFASALTLDL 883
Query: 84 -------IECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACKLKSYSEFSCRYLARQHA 136
++C+ P +LL E +S +L +++ R++A
Sbjct: 884 HRVEASRVDCFPCVRLPPRIALL---------EGPPIGASMGRLT-------KFIRRRYA 927
Query: 137 RLITRPGVKMIVVFGFIGVLIASV 160
+ +P VK IV+ F G+ + SV
Sbjct: 928 PFLLQPVVKGIVLLAFGGLFVLSV 951
>gi|355707744|gb|AES03050.1| Niemann-Pick disease, type C1 [Mustela putorius furo]
Length = 801
Score = 42.0 bits (97), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 78/170 (45%), Gaps = 29/170 (17%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++ +T Y + L++ G VL + S+ LSS ++VAFF +L +PA+
Sbjct: 228 IFILVQT---YQRDERLQGETLDQQLGRVLGEVAPSMFLSSFSEAVAFFLGALSKMPAVH 284
Query: 61 VFNLQLAILILFNMFVLLLVYPAIECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACKL 120
F+L + +L + + I C+V SLLG D+ +E C +
Sbjct: 285 TFSLFAGMAVLIDFLL------QITCFV--------SLLGLDI---KRQEKHRLDVLCCV 327
Query: 121 KSYSEF-------SC--RYLARQHARLITRPGVKMIVVFGFIGVLIASVS 161
+ + SC R+ ++ L+ + ++ IV+ F+GVL S++
Sbjct: 328 RGSEDGTSVQTSESCLFRFFKNSYSPLLLKDWMRPIVIAVFVGVLSFSIA 377
>gi|344031711|gb|AEM77480.1| patched, partial [Drosophila bipectinata]
Length = 448
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++T +A+ + Q T +L+ G SI+ + +FF+ + I + AL+
Sbjct: 261 IFMLTAAYAESNRREQ---------TSWILKLEGPSILFGACSTGGSFFAGAFIRVRALK 311
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
VF L AI++ N+ +L +PAI
Sbjct: 312 VFCLHAAIVMCSNLAAAILEFPAI 335
>gi|260796123|ref|XP_002593054.1| hypothetical protein BRAFLDRAFT_74381 [Branchiostoma floridae]
gi|229278278|gb|EEN49065.1| hypothetical protein BRAFLDRAFT_74381 [Branchiostoma floridae]
Length = 1017
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
MF+I + + T K + + + E ++ G+SI ++S+ VAF + PIPALR
Sbjct: 397 MFIIVQAWENLTPKERKKNKR--EAAAKAMKHAGVSITVTSITDLVAFGIGATSPIPALR 454
Query: 61 VFNLQLAILILF 72
F + +A+ I+F
Sbjct: 455 SFCIYVAVAIVF 466
>gi|302790111|ref|XP_002976823.1| hypothetical protein SELMODRAFT_106036 [Selaginella moellendorffii]
gi|300155301|gb|EFJ21933.1| hypothetical protein SELMODRAFT_106036 [Selaginella moellendorffii]
Length = 1225
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 72/155 (46%), Gaps = 16/155 (10%)
Query: 14 KNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFN 73
K Q + L+ G L + G SI L+S+ + +AF S P+PA RVF++ A IL +
Sbjct: 651 KRQEPELPLDLRVGYALAEVGPSITLASLAEFLAFAIGSFTPMPACRVFSMFAAFAILLD 710
Query: 74 M------FVLLLVYPAIECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACKLKSYSEFS 127
FV LL Y + ++ + L E ++ + + ++ + +
Sbjct: 711 FLLQITAFVSLLTYDFT---------RTEANRVDCLPCIKARERDYNAGYRNVSAFLKTT 761
Query: 128 CRYLARQ-HARLITRPGVKMIVVFGFIGVLIASVS 161
L ++ HA + +P VK +V+ F +L+ S++
Sbjct: 762 AACLFQKVHAPFLLKPAVKAVVLAAFSALLLVSIA 796
>gi|440903483|gb|ELR54134.1| Niemann-Pick C1 protein, partial [Bos grunniens mutus]
Length = 1294
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 23/167 (13%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++ +T Y + L++ G VL + S+ LSS ++VAFF L +PA+
Sbjct: 713 IFILVQT---YQRDERLQGETLDQQVGRVLGEVAPSMFLSSFAETVAFFLGGLSVMPAVH 769
Query: 61 VFNLQLAILILFNMFVLLLVYPAIECWVGSAAPKDQSLLGEDLMTSDEEEDE----HTSS 116
F+L + +L + + I C+V SLLG D+ ++ + + +
Sbjct: 770 TFSLFAGMAVLIDFLL------QITCFV--------SLLGLDIKRQEKNQLDVLCCVGGA 815
Query: 117 ACKLKSYSEFSC--RYLARQHARLITRPGVKMIVVFGFIGVLIASVS 161
A + SC R+ +A L+ + ++ +VV F+GVL S++
Sbjct: 816 ADDAGIQASESCLFRFFRNSYAPLLLKDWMRPLVVAVFVGVLSFSIA 862
>gi|154425876|gb|AAI51277.1| NPC1 protein [Bos taurus]
Length = 1277
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 23/167 (13%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++ +T Y + L++ G VL + S+ LSS ++VAFF L +PA+
Sbjct: 702 IFILVQT---YQRDERLQGETLDQQVGRVLGEVAPSMFLSSFAETVAFFLGGLSVMPAVH 758
Query: 61 VFNLQLAILILFNMFVLLLVYPAIECWVGSAAPKDQSLLGEDLMTSDEEEDE----HTSS 116
F+L + +L + + I C+V SLLG D+ ++ + + +
Sbjct: 759 TFSLFAGMAVLIDFLL------QITCFV--------SLLGLDIKRQEKNQLDVLCCVGGA 804
Query: 117 ACKLKSYSEFSC--RYLARQHARLITRPGVKMIVVFGFIGVLIASVS 161
A + SC R+ +A L+ + ++ +VV F+GVL S++
Sbjct: 805 ADDAGIQASESCLFRFFRNSYAPLLLKDWMRPLVVAVFVGVLSFSIA 851
>gi|302797583|ref|XP_002980552.1| hypothetical protein SELMODRAFT_112989 [Selaginella moellendorffii]
gi|300151558|gb|EFJ18203.1| hypothetical protein SELMODRAFT_112989 [Selaginella moellendorffii]
Length = 1226
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 73/161 (45%), Gaps = 28/161 (17%)
Query: 14 KNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFN 73
K Q + L+ G L + G SI L+S+ + +AF S P+PA RVF++ A IL +
Sbjct: 651 KRQEPELPLDLRVGNALAEVGPSITLASLAEFLAFAIGSFTPMPACRVFSMFAAFAILLD 710
Query: 74 M------FVLLLVYP-------AIECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACKL 120
FV LL Y ++C A + G +++ + T++AC
Sbjct: 711 FLLQITAFVSLLTYDFTRTEANRVDCLPCIKARQRDYNAGYRNISAFFK----TTAACLF 766
Query: 121 KSYSEFSCRYLARQHARLITRPGVKMIVVFGFIGVLIASVS 161
+ + HA L+ +P VK +V+ F +L+ S++
Sbjct: 767 Q-----------KVHAPLLLKPAVKAVVLAAFSALLLVSIA 796
>gi|333895477|ref|YP_004469352.1| RND superfamily exporter [Alteromonas sp. SN2]
gi|332995495|gb|AEF05550.1| RND superfamily exporter [Alteromonas sp. SN2]
Length = 861
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 12/122 (9%)
Query: 37 IILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVYPAIECWVGSAAPKDQ 96
++ +S+ S FFS L PIP +++F + IL + L PA ++ +P
Sbjct: 328 MLFTSLTSSAGFFSLMLTPIPPVQIFGAYIGFGILLAFLITLTFIPA---YISRMSPAAL 384
Query: 97 SLLGEDLMTSDEEEDEHTSSACKLKSYSEFSCRYLARQHARLITRPGVKMIVVFGFIGVL 156
S L + + +EE D + S LK + RY+A H LI I VFG I ++
Sbjct: 385 SKL-QVALHQNEEADNNEGSTTLLKR-TVTKLRYIALNHRALI-------IAVFGAITLV 435
Query: 157 IA 158
A
Sbjct: 436 SA 437
>gi|195119189|ref|XP_002004114.1| GI18274 [Drosophila mojavensis]
gi|193914689|gb|EDW13556.1| GI18274 [Drosophila mojavensis]
Length = 1253
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 17/93 (18%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECT----GIVLRKTGLSIILSSVCKSVAFFSASLIPI 56
+F++ +T+ Q D+ + NE T G VL + G S++L+SV +S FF SL +
Sbjct: 672 IFILVQTY-------QRDNRRANETTEKQVGRVLGRVGPSMLLTSVSESCCFFLGSLSDM 724
Query: 57 PALRVFNLQLAILILFNMFVLLLVYPAIECWVG 89
PA++ F L + +L + F+L I C++G
Sbjct: 725 PAVKAFALYAGVALLID-FIL-----QITCFIG 751
>gi|367011423|ref|XP_003680212.1| hypothetical protein TDEL_0C01120 [Torulaspora delbrueckii]
gi|359747871|emb|CCE91001.1| hypothetical protein TDEL_0C01120 [Torulaspora delbrueckii]
Length = 1173
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FLIT + + ++ + ++ ++ + +++ SI+LS +C++ F A+ + +PA+R
Sbjct: 636 IFLITHEYDRLSTDDV--TIDIDRRIYLAVKRICPSILLSFICQAGCFLIAAFVSMPAVR 693
Query: 61 VFNLQLAILILFNMFVLLLVYPA 83
F L A+ +LFN+ + + Y A
Sbjct: 694 NFALYSALAVLFNVLLQMTAYVA 716
>gi|299747301|ref|XP_001836943.2| vacuolar membrane protein [Coprinopsis cinerea okayama7#130]
gi|298407456|gb|EAU84560.2| vacuolar membrane protein [Coprinopsis cinerea okayama7#130]
Length = 1305
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 64/143 (44%), Gaps = 25/143 (17%)
Query: 29 VLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVYPAIECWV 88
L K G SI+LS++ ++ AF +L+P+PA+R F L A + N + + V+
Sbjct: 730 TLAKMGPSILLSTITETTAFALGALVPMPAVRNFALYAAGSVFLNALLQVTVF------- 782
Query: 89 GSAAPKDQSLLGEDLMTSDEEEDE-----HTSSACKLKSYSE-FS-----CRYLARQHAR 137
S L DL ++ + SS L+ F +++ R +A
Sbjct: 783 -------ISALTLDLRRTESNRVDCFPCVRLSSRIALRDTPPAFGGLGSLAKFIRRYYAP 835
Query: 138 LITRPGVKMIVVFGFIGVLIASV 160
+ +P VK V+ F G+ +ASV
Sbjct: 836 FLLKPAVKAGVLITFTGLFVASV 858
>gi|395749776|ref|XP_002828164.2| PREDICTED: LOW QUALITY PROTEIN: niemann-Pick C1 protein [Pongo
abelii]
Length = 1357
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 73/157 (46%), Gaps = 20/157 (12%)
Query: 11 YTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILI 70
Y + L++ G VL + S+ LSS ++VAFF +L +PA+ F+L A L
Sbjct: 815 YQRDERLQGETLDQQLGRVLGEVAPSMFLSSFSETVAFFLGALSMMPAVHTFSL-FAGLA 873
Query: 71 LFNMFVLLLVYPAIECWVGSAAPKDQSLLGEDLMTSDEEEDE------HTSSACKLKSYS 124
+F F+L I C+V SLLG D+ ++ + +++
Sbjct: 874 VFIDFLL-----QITCFV--------SLLGLDIKRQEKNRLDIFCCVRGAEDGTSVQASE 920
Query: 125 EFSCRYLARQHARLITRPGVKMIVVFGFIGVLIASVS 161
+ R+ ++ L+ + ++ IV+ F+GVL S++
Sbjct: 921 SYLFRFFKNSYSPLLLKDWMRPIVIAIFVGVLSFSIA 957
>gi|392586830|gb|EIW76165.1| vacuolar membrane protein [Coniophora puteana RWD-64-598 SS2]
Length = 1302
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 60/139 (43%), Gaps = 24/139 (17%)
Query: 32 KTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVYPAIECWVGSA 91
K G SI+LS++ ++VAF +L+P+PA+R F L A + N + + V+
Sbjct: 730 KMGPSILLSTITETVAFALGALVPMPAVRNFALYAAGSVFLNAVLQVTVF---------- 779
Query: 92 APKDQSLLGEDLMTSDEEE----------DEHTSSACKLKSYSEFSCRYLARQHARLITR 141
S L DL + T + S R++ R +A I R
Sbjct: 780 ----VSALSVDLRRVESHRVDCFPCIRLAPRITLTDAPPGSGISGLARFIRRYYAPFILR 835
Query: 142 PGVKMIVVFGFIGVLIASV 160
P +K I++ F G+ + SV
Sbjct: 836 PFMKAIILLVFTGIFVLSV 854
>gi|359474967|ref|XP_002279611.2| PREDICTED: niemann-Pick C1 protein [Vitis vinifera]
Length = 1234
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 65/145 (44%), Gaps = 28/145 (19%)
Query: 30 LRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNM------FVLLLVYP- 82
L + G SI L+S+ + +AF S IP+PA RVF++ A+ +L + FV L+V+
Sbjct: 673 LVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMFAALAVLLDFLLQVTAFVALIVFDF 732
Query: 83 ------AIECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACKLKSYSEFSCRYLARQHA 136
I+C+ P +S E DE + + Y+ HA
Sbjct: 733 MRAEDNRIDCFPCIKIP-----------SSSVESDEGINQ----RKPGGLLAWYMQEVHA 777
Query: 137 RLITRPGVKMIVVFGFIGVLIASVS 161
++ GVK+ V+ F +AS++
Sbjct: 778 PILGIWGVKIFVIAAFFAFTLASIA 802
>gi|327269875|ref|XP_003219718.1| PREDICTED: LOW QUALITY PROTEIN: Niemann-Pick C1 protein-like
[Anolis carolinensis]
Length = 1286
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 77/170 (45%), Gaps = 29/170 (17%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F+I +T Y + L++ G +L S+ LSS ++VAFF SL +PA+R
Sbjct: 711 IFIIVQT---YQRDERLQGETLDKQIGRILGDVAPSMFLSSFSETVAFFLGSLSTMPAVR 767
Query: 61 VFNLQLAILILFNMFVLLLVYPAIECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACKL 120
F+L A + +F F+L I C+V SLLG D+ +E C +
Sbjct: 768 TFSL-FAAMAVFIDFLL-----QITCFV--------SLLGLDI---KRQEKNRYDILCCV 810
Query: 121 KSYSEFSC---------RYLARQHARLITRPGVKMIVVFGFIGVLIASVS 161
K E S + ++ + + ++ IV+ F+GVL S++
Sbjct: 811 KGSEEISNVPHSESMLFLFFKNIYSPFLLKDWLRPIVISIFVGVLSFSIA 860
>gi|30851359|gb|AAH52437.1| Niemann Pick type C1 [Mus musculus]
gi|32452030|gb|AAH54539.1| Niemann Pick type C1 [Mus musculus]
Length = 1277
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 76/170 (44%), Gaps = 29/170 (17%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++ +T Y + L++ G +L + ++ LSS ++ AFF +L +PA+
Sbjct: 702 IFILVQT---YQRDERLQEETLDQQLGRILGEVAPTMFLSSFSETSAFFFGALSSMPAVH 758
Query: 61 VFNLQLAILILFNMFVLLLVYPAIECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACKL 120
F+L + +L + + I C+V SLLG D+ +E H C +
Sbjct: 759 TFSLFAGMAVLIDFLL------QITCFV--------SLLGLDI---KRQEKNHLDILCCV 801
Query: 121 KSYSE---------FSCRYLARQHARLITRPGVKMIVVFGFIGVLIASVS 161
+ + + R+ A L+ + ++ IVV F+GVL SV+
Sbjct: 802 RGADDGQGSHASESYLFRFFKNYFAPLLLKDWLRPIVVAVFVGVLSFSVA 851
>gi|89242146|ref|NP_032746.2| Niemann-Pick C1 protein precursor [Mus musculus]
gi|449081276|sp|O35604.2|NPC1_MOUSE RecName: Full=Niemann-Pick C1 protein; Flags: Precursor
gi|148669613|gb|EDL01560.1| Niemann Pick type C1 [Mus musculus]
Length = 1277
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 76/170 (44%), Gaps = 29/170 (17%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++ +T Y + L++ G +L + ++ LSS ++ AFF +L +PA+
Sbjct: 702 IFILVQT---YQRDERLQEETLDQQLGRILGEVAPTMFLSSFSETSAFFFGALSSMPAVH 758
Query: 61 VFNLQLAILILFNMFVLLLVYPAIECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACKL 120
F+L + +L + + I C+V SLLG D+ +E H C +
Sbjct: 759 TFSLFAGMAVLIDFLL------QITCFV--------SLLGLDI---KRQEKNHLDILCCV 801
Query: 121 KSYSE---------FSCRYLARQHARLITRPGVKMIVVFGFIGVLIASVS 161
+ + + R+ A L+ + ++ IVV F+GVL SV+
Sbjct: 802 RGADDGQGSHASESYLFRFFKNYFAPLLLKDWLRPIVVAVFVGVLSFSVA 851
>gi|2251242|gb|AAB63372.1| NPC1 [Mus musculus]
Length = 1278
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 76/170 (44%), Gaps = 29/170 (17%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++ +T Y + L++ G +L + ++ LSS ++ AFF +L +PA+
Sbjct: 703 IFILVQT---YQRDERLQEETLDQQLGRILGEVAPTMFLSSFSETSAFFFGALSSMPAVH 759
Query: 61 VFNLQLAILILFNMFVLLLVYPAIECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACKL 120
F+L + +L + + I C+V SLLG D+ +E H C +
Sbjct: 760 TFSLFAGMAVLIDFLL------QITCFV--------SLLGLDI---KRQEKNHLDILCCV 802
Query: 121 KSYSE---------FSCRYLARQHARLITRPGVKMIVVFGFIGVLIASVS 161
+ + + R+ A L+ + ++ IVV F+GVL SV+
Sbjct: 803 RGADDGQGSHASESYLFRFFKNYFAPLLLKDWLRPIVVAVFVGVLSFSVA 852
>gi|297744484|emb|CBI37746.3| unnamed protein product [Vitis vinifera]
Length = 2090
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 65/145 (44%), Gaps = 28/145 (19%)
Query: 30 LRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNM------FVLLLVYP- 82
L + G SI L+S+ + +AF S IP+PA RVF++ A+ +L + FV L+V+
Sbjct: 1529 LVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMFAALAVLLDFLLQVTAFVALIVFDF 1588
Query: 83 ------AIECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACKLKSYSEFSCRYLARQHA 136
I+C+ P +S E DE + + Y+ HA
Sbjct: 1589 MRAEDNRIDCFPCIKIP-----------SSSVESDEGINQ----RKPGGLLAWYMQEVHA 1633
Query: 137 RLITRPGVKMIVVFGFIGVLIASVS 161
++ GVK+ V+ F +AS++
Sbjct: 1634 PILGIWGVKIFVIAAFFAFTLASIA 1658
>gi|195397614|ref|XP_002057423.1| GJ18108 [Drosophila virilis]
gi|194141077|gb|EDW57496.1| GJ18108 [Drosophila virilis]
Length = 1282
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 17/93 (18%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECT----GIVLRKTGLSIILSSVCKSVAFFSASLIPI 56
+F++ +TF Q D + NE T G VL + G S++L+SV +S FF SL +
Sbjct: 701 IFILVQTF-------QRDQRRTNETTEQQVGRVLGRVGPSMLLTSVSESCCFFLGSLSDM 753
Query: 57 PALRVFNLQLAILILFNMFVLLLVYPAIECWVG 89
PA++ F L +L + F+L I C++G
Sbjct: 754 PAVKAFALYAGAALLID-FIL-----QITCFIG 780
>gi|74178457|dbj|BAE32486.1| unnamed protein product [Mus musculus]
gi|74206830|dbj|BAE33230.1| unnamed protein product [Mus musculus]
Length = 1094
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 76/170 (44%), Gaps = 29/170 (17%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++ +T Y + L++ G +L + ++ LSS ++ AFF +L +PA+
Sbjct: 702 IFILVQT---YQRDERLQEETLDQQLGRILGEVAPTMFLSSFSETSAFFFGALSSMPAVH 758
Query: 61 VFNLQLAILILFNMFVLLLVYPAIECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACKL 120
F+L + +L + + I C+V SLLG D+ +E H C +
Sbjct: 759 TFSLFAGMAVLIDFLL------QITCFV--------SLLGLDI---KRQEKNHLDILCCV 801
Query: 121 KSYSE---------FSCRYLARQHARLITRPGVKMIVVFGFIGVLIASVS 161
+ + + R+ A L+ + ++ IVV F+GVL SV+
Sbjct: 802 RGADDGQGSHASESYLFRFFKNYFAPLLLKDWLRPIVVAVFVGVLSFSVA 851
>gi|393246188|gb|EJD53697.1| multidrug efflux transporter AcrB transmembrane domain-containing
protein [Auricularia delicata TFB-10046 SS5]
Length = 1376
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 65/144 (45%), Gaps = 30/144 (20%)
Query: 30 LRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVYPA------ 83
+ K G SI+LSS+ +++AF +L+P+PA+R F L A + N + + V+ +
Sbjct: 796 MAKMGPSILLSSLTETLAFALGALVPMPAVRNFALYAAGSVFINAVLQITVFVSALALDV 855
Query: 84 -------IECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACKLKSYSEFSCRYLARQHA 136
I+C+ P LL + T A +L R + R +A
Sbjct: 856 RRTEAGRIDCFPCIRMPSKIVLL----------DISPTVHASRL-------ARIIRRHYA 898
Query: 137 RLITRPGVKMIVVFGFIGVLIASV 160
+ R VK++V+ F + +ASV
Sbjct: 899 PFLLRESVKLVVLIAFGALFVASV 922
>gi|27807461|ref|NP_777183.1| Niemann-Pick C1 protein precursor [Bos taurus]
gi|10945625|gb|AAG24620.1|AF299073_1 Niemann-Pick type C1 disease protein [Bos taurus]
gi|296473818|tpg|DAA15933.1| TPA: Niemann-Pick disease, type C1 [Bos taurus]
Length = 1277
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 78/167 (46%), Gaps = 23/167 (13%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++ +T Y + L++ G VL + S+ LSS ++VAFF L +PA+
Sbjct: 702 IFILVQT---YQIDERLQGETLDQQVGRVLGEVAPSMFLSSFAETVAFFLGGLSVMPAVH 758
Query: 61 VFNLQLAILILFNMFVLLLVYPAIECWVGSAAPKDQSLLGEDLMTSDEEEDE----HTSS 116
F+L + +L + + I C+V SLLG D+ ++ + + +
Sbjct: 759 TFSLFAGMAVLIDFLL------QITCFV--------SLLGLDIKRQEKNQLDVLCCVGGA 804
Query: 117 ACKLKSYSEFSC--RYLARQHARLITRPGVKMIVVFGFIGVLIASVS 161
A + SC R+ +A L+ + ++ +VV F+GVL S++
Sbjct: 805 ADDAGIQASESCLFRFFRNSYAPLLLKDWMRPLVVAVFVGVLSFSIA 851
>gi|291223680|ref|XP_002731837.1| PREDICTED: Niemann Pick type C1-like, partial [Saccoglossus
kowalevskii]
Length = 1283
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%)
Query: 29 VLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVYPAI 84
VL S++LS + +SVAFF +L +PA+R F L + +LFN +L+ + A+
Sbjct: 724 VLGDVAPSMVLSCLSESVAFFLGALTTMPAVRTFALYAGLAVLFNFLLLVSAFVAL 779
>gi|323454953|gb|EGB10822.1| hypothetical protein AURANDRAFT_62331 [Aureococcus anophagefferens]
Length = 1582
Score = 40.4 bits (93), Expect = 0.28, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 2 FLITKTFAKYTSKNQFD---SVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPA 58
FLI F K++ D + L E RK G S+ ++S+ + +FF+ ++ +PA
Sbjct: 762 FLIFDVF-----KHELDRGVARSLPELLAETYRKAGASMAITSLSSAASFFANAVSTLPA 816
Query: 59 LRVFNLQLAILILFNMFVLLLVYPA 83
+R F + LIL N + + V+PA
Sbjct: 817 IRSFGVFCGTLILVNWALDVTVFPA 841
>gi|405976974|gb|EKC41449.1| dispatched-like protein 1 [Crassostrea gigas]
Length = 1104
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 37/53 (69%)
Query: 32 KTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVYPAI 84
K+ LS++++S+ SVAFFS+++ P+ A R F + +L+++N +++ +P +
Sbjct: 413 KSVLSMLITSLTTSVAFFSSAISPLLATRSFGVFSGLLVIYNYLSVIIFFPTV 465
>gi|409049668|gb|EKM59145.1| hypothetical protein PHACADRAFT_249391 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1391
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 68/154 (44%), Gaps = 29/154 (18%)
Query: 20 VKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLL 79
+ + E L K G SI+LS++ + VAF +++P+PA+R F L A +L N + +
Sbjct: 805 LSIEERVARTLAKMGPSILLSTITEFVAFALGAIVPMPAVRNFALYAAGSVLLNAMLQVT 864
Query: 80 VYPA-------------IECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACKLKSYSEF 126
V + ++C+ P +L+ + S +
Sbjct: 865 VLVSAMALDQRRVEASRVDCFPCIRLPSRIALM----------DPPQAGSGLGILG---- 910
Query: 127 SCRYLARQHARLITRPGVKMIVVFGFIGVLIASV 160
+++ R +A + +P VK IV+ F G+L+ SV
Sbjct: 911 --KFIRRHYAPFLLKPIVKGIVLLTFAGLLVCSV 942
>gi|449455603|ref|XP_004145542.1| PREDICTED: niemann-Pick C1 protein-like [Cucumis sativus]
Length = 1244
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 70/141 (49%), Gaps = 22/141 (15%)
Query: 30 LRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVYPAIECWVG 89
L + G SI L+S+ + +AF S IP+PA RVF++ A+ +L + + + + A+
Sbjct: 684 LVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMFAALAVLLDFLLQVTAFVAL----- 738
Query: 90 SAAPKDQSLLGEDLMTSDEEED-----EHTSSACKLKSYSEFS----CRYLARQHARLIT 140
++ + L T D+ D + + A K ++ + RY+ HA ++
Sbjct: 739 --------IVFDFLRTEDKRVDCFPCIKSSRYAGSDKGITQKNPGLLARYMKEIHAPALS 790
Query: 141 RPGVKMIVVFGFIGVLIASVS 161
VK+IV+ F+G +AS++
Sbjct: 791 IWIVKIIVISIFVGFTLASIA 811
>gi|389747295|gb|EIM88474.1| multidrug efflux transporter AcrB transmembrane domain-containing
protein [Stereum hirsutum FP-91666 SS1]
Length = 1386
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 67/145 (46%), Gaps = 29/145 (20%)
Query: 29 VLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVYPA----- 83
L + G SI+LS++ ++ AF +L+P+PA+R F L A +L N + + V+ +
Sbjct: 809 TLARMGPSILLSTITETFAFALGALVPMPAVRNFALYAAGSVLLNAILQVTVFISALVLD 868
Query: 84 --------IECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACKLKSYSEFSCRYLARQH 135
++C+ P LL E +A + + + R + + +
Sbjct: 869 LRRVESNRVDCFPCIRLPSRIQLL------------EAAPTATSIGTLA----RLIRKYY 912
Query: 136 ARLITRPGVKMIVVFGFIGVLIASV 160
A + +P VK +V+ F G+ +ASV
Sbjct: 913 APFLLKPVVKGVVLAIFSGIFVASV 937
>gi|50978806|ref|NP_001003107.1| Niemann-Pick C1 protein precursor [Canis lupus familiaris]
gi|11878263|gb|AAG40873.1|AF315034_1 Niemann-Pick type C1 disease protein [Canis lupus familiaris]
Length = 1276
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 23/167 (13%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++ +T Y + L + G VL + S+ LSS ++VAFF +L +PA+
Sbjct: 702 IFILVQT---YQRDERLQGETLEQQLGRVLGEVAPSMFLSSFSEAVAFFLGALSQMPAVH 758
Query: 61 VFNLQLAILILFNMFVLLLVYPAIECWVGSAAPKDQSLLGEDLMTSDEEEDE----HTSS 116
F+L + +L + + I C+V SLLG DL ++ + T S
Sbjct: 759 TFSLFAGMAVLIDFLL------QITCFV--------SLLGLDLKRQEKNRLDVLCCLTGS 804
Query: 117 ACKLKSYSEFSC--RYLARQHARLITRPGVKMIVVFGFIGVLIASVS 161
+ SC R+ ++ + + ++ IV+ F+G+L S++
Sbjct: 805 EGGTGIQASESCLFRFFKNSYSPFLLKDWMRPIVIAVFVGILSFSIA 851
>gi|20531740|gb|AAM27450.1| mutant Niemann-Pick C1 [Felis catus]
Length = 1276
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 77/170 (45%), Gaps = 29/170 (17%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++ +T Y + L++ G VL + S+ LSS ++VAFF +L +PA+
Sbjct: 702 IFILVQT---YQRDERLHGETLDQQLGRVLGEVAPSMFLSSFSEAVAFFLGALSKMPAVH 758
Query: 61 VFNLQLAILILFNMFVLLLVYPAIECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACKL 120
F+L + +L + + I C+V SLLG D+ +E C +
Sbjct: 759 TFSLFAGMAVLIDFLL------QITCFV--------SLLGLDI---KRQEKNRLDVLCCV 801
Query: 121 KSYSEF-------SC--RYLARQHARLITRPGVKMIVVFGFIGVLIASVS 161
+ + SC R ++ L+ + ++ IV+ F+GVL SV+
Sbjct: 802 RGSEDGTSVQASESCLFRLFKHSYSPLLLKDWMRPIVIAIFVGVLSFSVA 851
>gi|348576611|ref|XP_003474080.1| PREDICTED: niemann-Pick C1 protein-like [Cavia porcellus]
Length = 1393
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 80/170 (47%), Gaps = 29/170 (17%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++ +T Y + L++ G VL + S+ LSS C++ AFF +L +PA+
Sbjct: 818 IFILVQT---YQRDERLQGETLDQQLGRVLGEVAPSMFLSSFCETTAFFLGALSAMPAVH 874
Query: 61 VFNLQLAILILFNMFVLLLVYPAIECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACKL 120
F+L A L +F F+L + C+V SLLG D+ +E C +
Sbjct: 875 TFSL-FAGLAVFIDFLLQMT-----CFV--------SLLGMDIR---RQEKNRLDILCCV 917
Query: 121 KSYSEF-------SC--RYLARQHARLITRPGVKMIVVFGFIGVLIASVS 161
+ ++ SC + ++ L+ + ++ +VV F+G+L SV+
Sbjct: 918 QGANDGRSVQASESCLFHFFKNSYSPLLLKDWMRPLVVAIFVGLLSFSVA 967
>gi|449278194|gb|EMC86138.1| Niemann-Pick C1 protein, partial [Columba livia]
Length = 1259
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 75/165 (45%), Gaps = 29/165 (17%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F+I +T + + L++ G VL S+ LSS ++VAFF +L +PA+R
Sbjct: 684 IFIIVQTLQR---DERLQGETLDKQIGRVLGDVAPSMFLSSFSETVAFFLGTLSTMPAVR 740
Query: 61 VFNLQLAILILFNMFVLLLVYPAIECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACKL 120
F+L + +L + F+L + C+V SLLG D+ +E C +
Sbjct: 741 TFSLFAGMAVLID-FIL-----QVTCFV--------SLLGLDI---KRQESNRLDILCCI 783
Query: 121 KSYSEFSC---------RYLARQHARLITRPGVKMIVVFGFIGVL 156
KS E S + ++ + + ++ IV+ F+GVL
Sbjct: 784 KSDEEMSGVQRSESILFLFFKNLYSPYLLKDWMRPIVIAVFVGVL 828
>gi|57863766|ref|NP_001009829.2| Niemann-Pick C1 protein precursor [Felis catus]
gi|8099648|gb|AAF72187.1|AF258783_1 Niemann-Pick type C1 disease protein [Felis catus]
Length = 1276
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 77/170 (45%), Gaps = 29/170 (17%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++ +T Y + L++ G VL + S+ LSS ++VAFF +L +PA+
Sbjct: 702 IFILVQT---YQRDERLHGETLDQQLGRVLGEVAPSMFLSSFSEAVAFFLGALSKMPAVH 758
Query: 61 VFNLQLAILILFNMFVLLLVYPAIECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACKL 120
F+L + +L + + I C+V SLLG D+ +E C +
Sbjct: 759 TFSLFAGMAVLIDFLL------QITCFV--------SLLGLDI---KRQEKNRLDVLCCV 801
Query: 121 KSYSEF-------SC--RYLARQHARLITRPGVKMIVVFGFIGVLIASVS 161
+ + SC R ++ L+ + ++ IV+ F+GVL SV+
Sbjct: 802 RGSEDGTSVQASESCLFRLFKHSYSPLLLKDWMRPIVIAIFVGVLSFSVA 851
>gi|20531742|gb|AAM27451.1| Niemann-Pick C1 [Felis catus]
Length = 1276
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 77/170 (45%), Gaps = 29/170 (17%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++ +T Y + L++ G VL + S+ LSS ++VAFF +L +PA+
Sbjct: 702 IFILVQT---YQRDERLHGETLDQQLGRVLGEVAPSMFLSSFSEAVAFFLGALSKMPAVH 758
Query: 61 VFNLQLAILILFNMFVLLLVYPAIECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACKL 120
F+L + +L + + I C+V SLLG D+ +E C +
Sbjct: 759 TFSLFAGMAVLIDFLL------QITCFV--------SLLGLDI---KRQEKNRLDVLCCV 801
Query: 121 KSYSEF-------SC--RYLARQHARLITRPGVKMIVVFGFIGVLIASVS 161
+ + SC R ++ L+ + ++ IV+ F+GVL SV+
Sbjct: 802 RGSEDGTSVQASESCLFRLFKHSYSPLLLKDWMRPIVIAIFVGVLSFSVA 851
>gi|402902800|ref|XP_003914281.1| PREDICTED: niemann-Pick C1 protein [Papio anubis]
Length = 1277
Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 26/160 (16%)
Query: 11 YTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILI 70
Y + L++ G VL + S+ LSS ++VAFF ++ +PA+ F+L A L
Sbjct: 709 YQRDERLQGETLDQQLGRVLGEVAPSMFLSSFSETVAFFLGAMSVMPAVHTFSL-FAGLA 767
Query: 71 LFNMFVLLLVYPAIECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACKLKSYSEF---- 126
+F F+L I C+V SLLG D+ + +E C ++ +
Sbjct: 768 VFIDFLL-----QITCFV--------SLLGLDI---NRQEKNRLDIFCCVRGAEDGTSVQ 811
Query: 127 ---SC--RYLARQHARLITRPGVKMIVVFGFIGVLIASVS 161
SC R+ ++ L+ + ++ IV+ F+GVL S++
Sbjct: 812 ASESCLFRFFKNSYSPLLLKDWMRPIVIAIFVGVLSFSIA 851
>gi|387539678|gb|AFJ70466.1| Niemann-Pick C1 protein precursor [Macaca mulatta]
Length = 1277
Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 26/160 (16%)
Query: 11 YTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILI 70
Y + L++ G VL + S+ LSS ++VAFF ++ +PA+ F+L A L
Sbjct: 709 YQRDERLQGETLDQQLGRVLGEVAPSMFLSSFSETVAFFLGAMSVMPAVHTFSL-FAGLA 767
Query: 71 LFNMFVLLLVYPAIECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACKLKSYSEF---- 126
+F F+L I C+V SLLG D+ + +E C ++ +
Sbjct: 768 VFIDFLL-----QITCFV--------SLLGLDI---NRQEKNRLDIFCCVRGAEDGTSVQ 811
Query: 127 ---SC--RYLARQHARLITRPGVKMIVVFGFIGVLIASVS 161
SC R+ ++ L+ + ++ IV+ F+GVL S++
Sbjct: 812 ASESCLFRFFKNSYSPLLLKDWMRPIVIAIFVGVLSFSIA 851
>gi|355754941|gb|EHH58808.1| Niemann-Pick C1 protein [Macaca fascicularis]
Length = 1144
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 26/160 (16%)
Query: 11 YTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILI 70
Y + L++ G VL + S+ LSS ++VAFF ++ +PA+ F+L A L
Sbjct: 656 YQRDERLQGETLDQQLGRVLGEVAPSMFLSSFSETVAFFLGAMSVMPAVHTFSL-FAGLA 714
Query: 71 LFNMFVLLLVYPAIECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACKLKSYSEF---- 126
+F F+L I C+V SLLG D+ + +E C ++ +
Sbjct: 715 VFIDFLL-----QITCFV--------SLLGLDI---NRQEKNRLDIFCCVRGAEDGTSVQ 758
Query: 127 ---SC--RYLARQHARLITRPGVKMIVVFGFIGVLIASVS 161
SC R+ ++ L+ + ++ IV+ F+GVL S++
Sbjct: 759 ASESCLFRFFKNSYSPLLLKDWMRPIVIAIFVGVLSFSIA 798
>gi|380813138|gb|AFE78443.1| Niemann-Pick C1 protein precursor [Macaca mulatta]
gi|380813140|gb|AFE78444.1| Niemann-Pick C1 protein precursor [Macaca mulatta]
Length = 1277
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 26/160 (16%)
Query: 11 YTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILI 70
Y + L++ G VL + S+ LSS ++VAFF ++ +PA+ F+L A L
Sbjct: 709 YQRDERLQGETLDQQLGRVLGEVAPSMFLSSFSETVAFFLGAMSVMPAVHTFSL-FAGLA 767
Query: 71 LFNMFVLLLVYPAIECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACKLKSYSEF---- 126
+F F+L I C+V SLLG D+ + +E C ++ +
Sbjct: 768 VFIDFLL-----QITCFV--------SLLGLDI---NRQEKNRLDIFCCVRGAEDGTSVQ 811
Query: 127 ---SC--RYLARQHARLITRPGVKMIVVFGFIGVLIASVS 161
SC R+ ++ L+ + ++ IV+ F+GVL S++
Sbjct: 812 ASESCLFRFFKNSYSPLLLKDWMRPIVIAIFVGVLSFSIA 851
>gi|147770431|emb|CAN75892.1| hypothetical protein VITISV_009389 [Vitis vinifera]
Length = 1050
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 68/139 (48%), Gaps = 17/139 (12%)
Query: 30 LRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNM------FVLLLVYPA 83
L + G SI L+S+ + +AF + IP+PA RVF++ A+ +L + FV L+V+
Sbjct: 589 LVEVGPSITLASLAEVLAFAVGTFIPMPACRVFSMFAALAVLLDFLLQVTAFVALIVFDF 648
Query: 84 IECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACKL-KSYSEFSCRYLARQHARLITRP 142
+ +D+ + D + + S + + RY+ HA +++
Sbjct: 649 LRA-------EDRRI---DCFPCIKISSSYADSDKGIGQRKPGLLARYMKEVHAPILSLW 698
Query: 143 GVKMIVVFGFIGVLIASVS 161
GVK++V+ F+ +AS++
Sbjct: 699 GVKLVVISVFVAFALASIA 717
>gi|431896284|gb|ELK05700.1| Niemann-Pick C1 protein [Pteropus alecto]
Length = 1297
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 81/170 (47%), Gaps = 29/170 (17%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++ +T Y + L++ G +L + S++LSS ++VAFF +L +PA+
Sbjct: 722 IFILVQT---YQRDERLQGETLDQQLGRILGEVAPSMLLSSFSETVAFFLGALSMMPAVH 778
Query: 61 VFNLQLAILILFNMFVLLLVYPAIECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACKL 120
F+L A + +F F+L I C+V SLLG D+ +E C +
Sbjct: 779 TFSL-FAGMAVFIDFLL-----QITCFV--------SLLGLDI---KRQEKNRLDVLCCV 821
Query: 121 KSYSEF-------SC--RYLARQHARLITRPGVKMIVVFGFIGVLIASVS 161
+ + SC R+ ++ L+ + ++ IV+ F+GVL S++
Sbjct: 822 RGAEDGTGIQASESCLFRFFKNSYSPLLLKDWMRPIVIAVFMGVLSFSIA 871
>gi|297275084|ref|XP_002800934.1| PREDICTED: Niemann-Pick C1 protein-like [Macaca mulatta]
Length = 1257
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 26/160 (16%)
Query: 11 YTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILI 70
Y + L++ G VL + S+ LSS ++VAFF ++ +PA+ F+L A L
Sbjct: 689 YQRDERLQGETLDQQLGRVLGEVAPSMFLSSFSETVAFFLGAMSVMPAVHTFSL-FAGLA 747
Query: 71 LFNMFVLLLVYPAIECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACKLKSYSEF---- 126
+F F+L I C+V SLLG D+ + +E C ++ +
Sbjct: 748 VFIDFLL-----QITCFV--------SLLGLDI---NRQEKNRLDIFCCVRGAEDGTSVQ 791
Query: 127 ---SC--RYLARQHARLITRPGVKMIVVFGFIGVLIASVS 161
SC R+ ++ L+ + ++ IV+ F+GVL S++
Sbjct: 792 ASESCLFRFFKNSYSPLLLKDWMRPIVIAIFVGVLSFSIA 831
>gi|297745553|emb|CBI40718.3| unnamed protein product [Vitis vinifera]
Length = 1242
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 67/143 (46%), Gaps = 25/143 (17%)
Query: 30 LRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVYPAIECWVG 89
L + G SI L+S+ + +AF + IP+PA RVF++ A+ +L + + + + A
Sbjct: 683 LVEVGPSITLASLAEVLAFAVGTFIPMPACRVFSMFAALAVLLDFLLQVTAFVA------ 736
Query: 90 SAAPKDQSLLGEDLMTSDEEEDEHTSSACKLKSYSEFS-----------CRYLARQHARL 138
L+ D + +++ + SY++ RY+ HA +
Sbjct: 737 --------LIVFDFLRAEDRRIDCFPCIKISSSYADSDKGIGQRKPGLLARYMKEVHAPI 788
Query: 139 ITRPGVKMIVVFGFIGVLIASVS 161
++ GVK++V+ F+ +AS++
Sbjct: 789 LSLWGVKLVVISVFVAFALASIA 811
>gi|397520466|ref|XP_003830338.1| PREDICTED: niemann-Pick C1 protein [Pan paniscus]
Length = 1277
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 74/160 (46%), Gaps = 26/160 (16%)
Query: 11 YTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILI 70
Y + L++ G VL + S+ LSS ++VAFF +L +PA+ F+L A L
Sbjct: 709 YQRDERLQGETLDQQLGRVLGEVAPSMFLSSFSETVAFFLGALSVMPAVHTFSL-FAGLA 767
Query: 71 LFNMFVLLLVYPAIECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACKLKSYSEF---- 126
+F F+L I C+V SLLG D+ +E C ++ +
Sbjct: 768 VFIDFLL-----QITCFV--------SLLGLDI---KRQEKNRLDIFCCVRGAEDGTSVQ 811
Query: 127 ---SC--RYLARQHARLITRPGVKMIVVFGFIGVLIASVS 161
SC R+ ++ L+ + ++ IV+ F+GVL S++
Sbjct: 812 ASESCLFRFFKNSYSPLLLKDWMRPIVIAVFVGVLSFSIA 851
>gi|291221448|ref|XP_002730736.1| PREDICTED: Niemann-Pick disease, type C1-like [Saccoglossus
kowalevskii]
Length = 1380
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 60/137 (43%), Gaps = 19/137 (13%)
Query: 29 VLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVYPAIECWV 88
VL S++L S+ +S+ FF +L +PA+R F L + +LFN +L+ + A
Sbjct: 736 VLGCAAPSMVLCSLTESITFFLGALTTMPAVRTFALYAGLAVLFNFLLLISAFTA----- 790
Query: 89 GSAAPKDQSLLGEDLMTSDEEE-DEHTSSACKLKS----YSEFSCRYLARQHARLITRPG 143
LL DL D+ D + KS + E ++ + +A I
Sbjct: 791 ---------LLALDLRRQDDNRFDVCCCIPPRKKSTKPKHREVLHSFMKKYYAPFIVNKW 841
Query: 144 VKMIVVFGFIGVLIASV 160
V+ +++ F+G + V
Sbjct: 842 VRPVIIITFVGFMCCCV 858
>gi|410218048|gb|JAA06243.1| Niemann-Pick disease, type C1 [Pan troglodytes]
gi|410258506|gb|JAA17220.1| Niemann-Pick disease, type C1 [Pan troglodytes]
gi|410300472|gb|JAA28836.1| Niemann-Pick disease, type C1 [Pan troglodytes]
Length = 1277
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 74/160 (46%), Gaps = 26/160 (16%)
Query: 11 YTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILI 70
Y + L++ G VL + S+ LSS ++VAFF +L +PA+ F+L A L
Sbjct: 709 YQRDERLQGETLDQQLGRVLGEVAPSMFLSSFSETVAFFLGALSVMPAVHTFSL-FAGLA 767
Query: 71 LFNMFVLLLVYPAIECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACKLKSYSEF---- 126
+F F+L I C+V SLLG D+ +E C ++ +
Sbjct: 768 VFIDFLL-----QITCFV--------SLLGLDI---KRQEKNRLDIFCCVRGAEDGTSVQ 811
Query: 127 ---SC--RYLARQHARLITRPGVKMIVVFGFIGVLIASVS 161
SC R+ ++ L+ + ++ IV+ F+GVL S++
Sbjct: 812 ASESCLFRFFKNSYSPLLLKDWMRPIVIAVFVGVLSFSIA 851
>gi|114672573|ref|XP_001155285.1| PREDICTED: niemann-Pick C1 protein isoform 4 [Pan troglodytes]
Length = 1277
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 74/160 (46%), Gaps = 26/160 (16%)
Query: 11 YTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILI 70
Y + L++ G VL + S+ LSS ++VAFF +L +PA+ F+L A L
Sbjct: 709 YQRDERLQGETLDQQLGRVLGEVAPSMFLSSFSETVAFFLGALSVMPAVHTFSL-FAGLA 767
Query: 71 LFNMFVLLLVYPAIECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACKLKSYSEF---- 126
+F F+L I C+V SLLG D+ +E C ++ +
Sbjct: 768 VFIDFLL-----QITCFV--------SLLGLDI---KRQEKNRLDIFCCVRGAEDGTSVQ 811
Query: 127 ---SC--RYLARQHARLITRPGVKMIVVFGFIGVLIASVS 161
SC R+ ++ L+ + ++ IV+ F+GVL S++
Sbjct: 812 ASESCLFRFFKNSYSPLLLKDWMRPIVIAVFVGVLSFSIA 851
>gi|355701867|gb|EHH29220.1| Niemann-Pick C1 protein [Macaca mulatta]
Length = 1226
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 26/160 (16%)
Query: 11 YTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILI 70
Y + L++ G VL + S+ LSS ++VAFF ++ +PA+ F+L A L
Sbjct: 673 YQRDERLQGETLDQQLGRVLGEVAPSMFLSSFSETVAFFLGAMSVMPAVHTFSL-FAGLA 731
Query: 71 LFNMFVLLLVYPAIECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACKLKSYSEF---- 126
+F F+L I C+V SLLG D+ + +E C ++ +
Sbjct: 732 VFIDFLL-----QITCFV--------SLLGLDI---NRQEKNRLDIFCCVRGAEDGTSVQ 775
Query: 127 ---SC--RYLARQHARLITRPGVKMIVVFGFIGVLIASVS 161
SC R+ ++ L+ + ++ IV+ F+GVL S++
Sbjct: 776 ASESCLFRFFKNSYSPLLLKDWMRPIVIAIFVGVLSFSIA 815
>gi|194375700|dbj|BAG57194.1| unnamed protein product [Homo sapiens]
Length = 960
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 74/160 (46%), Gaps = 26/160 (16%)
Query: 11 YTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILI 70
Y + L++ G VL + S+ LSS ++VAFF +L +PA+ F+L A L
Sbjct: 391 YQRDERLQGETLDQQLGRVLGEVAPSMFLSSFSETVAFFLGALSVMPAVHTFSL-FAGLA 449
Query: 71 LFNMFVLLLVYPAIECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACKLKSYSEF---- 126
+F F+L I C+V SLLG D+ +E C ++ +
Sbjct: 450 VFIDFLL-----QITCFV--------SLLGLDI---KRQEKNRLDIFCCVRGAEDGTSVQ 493
Query: 127 ---SC--RYLARQHARLITRPGVKMIVVFGFIGVLIASVS 161
SC R+ ++ L+ + ++ IV+ F+GVL S++
Sbjct: 494 ASESCLFRFFKNSYSPLLLKDWMRPIVIAIFVGVLSFSIA 533
>gi|298707590|emb|CBJ30169.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1457
Score = 39.7 bits (91), Expect = 0.43, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Query: 21 KLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLV 80
+L E G + K SI+ ++VC++VAF +L IPALR F L A ++ + +
Sbjct: 443 RLEERMGAAVSKVAPSILGAAVCEAVAFLVGALTDIPALRQFCLVAATAVVVGFALQISW 502
Query: 81 YPAIECWVGSAAPKDQSLLGEDLMTSDEEEDE 112
+ A C + + L MT EE+D+
Sbjct: 503 FMAALCLDARRVSQGRLDLAP-WMTLPEEDDD 533
>gi|410350029|gb|JAA41618.1| Niemann-Pick disease, type C1 [Pan troglodytes]
gi|410350031|gb|JAA41619.1| Niemann-Pick disease, type C1 [Pan troglodytes]
Length = 1277
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 74/160 (46%), Gaps = 26/160 (16%)
Query: 11 YTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILI 70
Y + L++ G VL + S+ LSS ++VAFF +L +PA+ F+L A L
Sbjct: 709 YQRDERLQGETLDQQLGRVLGEVAPSMFLSSFSETVAFFLGALSVMPAVHTFSL-FAGLA 767
Query: 71 LFNMFVLLLVYPAIECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACKLKSYSEF---- 126
+F F+L I C+V SLLG D+ +E C ++ +
Sbjct: 768 VFIDFLL-----QITCFV--------SLLGLDI---KRQEKNRLDIFCCVRGAEDGTSVQ 811
Query: 127 ---SC--RYLARQHARLITRPGVKMIVVFGFIGVLIASVS 161
SC R+ ++ L+ + ++ IV+ F+GVL S++
Sbjct: 812 ASESCLFRFFKNSYSPLLLKDWMRPIVIAVFVGVLSFSIA 851
>gi|224102795|ref|XP_002312804.1| cholesterol transport protein [Populus trichocarpa]
gi|222849212|gb|EEE86759.1| cholesterol transport protein [Populus trichocarpa]
Length = 1223
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 70/164 (42%), Gaps = 29/164 (17%)
Query: 11 YTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILI 70
+ K Q + + E L + G SI L+S+ + +AF S IP+PA RVF++ A+ +
Sbjct: 655 HAVKRQSIELAIEERISNALHEVGPSITLASLSEILAFAVGSFIPMPACRVFSMFAALAV 714
Query: 71 LFNM------FVLLLVYPA-------IECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSA 117
L + FV L+ + I+C+ P S+E ++
Sbjct: 715 LLDFLLQVTAFVALIAFDCRRAEDNRIDCFPCIKVPSSPG-------GSNEGINQRRPG- 766
Query: 118 CKLKSYSEFSCRYLARQHARLITRPGVKMIVVFGFIGVLIASVS 161
RY+ HA ++ VK++V+ F+ +ASV+
Sbjct: 767 --------LLARYMKEVHAPILGLWAVKIVVIAIFVAFALASVA 802
>gi|359491908|ref|XP_002272383.2| PREDICTED: niemann-Pick C1 protein-like [Vitis vinifera]
Length = 1309
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 67/143 (46%), Gaps = 25/143 (17%)
Query: 30 LRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVYPAIECWVG 89
L + G SI L+S+ + +AF + IP+PA RVF++ A+ +L + + + + A
Sbjct: 750 LVEVGPSITLASLAEVLAFAVGTFIPMPACRVFSMFAALAVLLDFLLQVTAFVA------ 803
Query: 90 SAAPKDQSLLGEDLMTSDEEEDEHTSSACKLKSYSEFS-----------CRYLARQHARL 138
L+ D + +++ + SY++ RY+ HA +
Sbjct: 804 --------LIVFDFLRAEDRRIDCFPCIKISSSYADSDKGIGQRKPGLLARYMKEVHAPI 855
Query: 139 ITRPGVKMIVVFGFIGVLIASVS 161
++ GVK++V+ F+ +AS++
Sbjct: 856 LSLWGVKLVVISVFVAFALASIA 878
>gi|357168194|ref|XP_003581529.1| PREDICTED: niemann-Pick C1 protein [Brachypodium distachyon]
Length = 1237
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 66/156 (42%), Gaps = 18/156 (11%)
Query: 14 KNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFN 73
K Q + L E L + G SI L+S+ + +AF +++ P+PA RVF++ A+ +L +
Sbjct: 659 KRQPYGLVLEERVSNALVEVGPSITLASLAEVLAFAVSAINPMPATRVFSIFAAMAVLLD 718
Query: 74 M------FVLLLVYPAIECWVG--SAAPKDQSLLGEDLMTSDEEEDEHTSSACKLKSYSE 125
FV L+V G P + D + D +
Sbjct: 719 FLLQVTAFVALIVLDFRRAEDGRIDCVPCARLTSSTDTVAGDGSPHQG----------PH 768
Query: 126 FSCRYLARQHARLITRPGVKMIVVFGFIGVLIASVS 161
RY+ H ++ VK IV+ F+G+ AS++
Sbjct: 769 LVARYMKDIHGPILGYRAVKFIVIAAFVGLAFASIA 804
>gi|62087676|dbj|BAD92285.1| Niemann-Pick disease, type C1 variant [Homo sapiens]
Length = 1289
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 74/160 (46%), Gaps = 26/160 (16%)
Query: 11 YTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILI 70
Y + L++ G VL + S+ LSS ++VAFF +L +PA+ F+L A L
Sbjct: 720 YQRDERLQGETLDQQLGRVLGEVAPSMFLSSFSETVAFFLGALSVMPAVHTFSL-FAGLA 778
Query: 71 LFNMFVLLLVYPAIECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACKLKSYSEF---- 126
+F F+L I C+V SLLG D+ +E C ++ +
Sbjct: 779 VFIDFLL-----QITCFV--------SLLGLDI---KRQEKNRLDIFCCVRGAEDGTSVQ 822
Query: 127 ---SC--RYLARQHARLITRPGVKMIVVFGFIGVLIASVS 161
SC R+ ++ L+ + ++ IV+ F+GVL S++
Sbjct: 823 ASESCLFRFFKNSYSPLLLKDWMRPIVIAIFVGVLSFSIA 862
>gi|348500675|ref|XP_003437898.1| PREDICTED: niemann-Pick C1 protein-like [Oreochromis niloticus]
Length = 1273
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 77/174 (44%), Gaps = 39/174 (22%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F+I +T Y + +L++ G +L S+ LSS ++VAFF +L +PA+R
Sbjct: 705 IFIIVQT---YQRDERMPQEELHQQIGRILGDIAPSLFLSSFSETVAFFLGALSSMPAVR 761
Query: 61 VFNLQLAILILFNMFVLLLVYPAIECWVGSAAPKDQSLLGED-------------LMTSD 107
F++ A L +F F+L I C+V SLLG D MT
Sbjct: 762 TFSM-FAGLAVFIDFLL-----QISCFV--------SLLGLDAKRQERNRLDVFCCMTLP 807
Query: 108 EEEDEHTSSACKLKSYSEFSCRYLARQHARLITRPGVKMIVVFGFIGVLIASVS 161
E ++ T F R+ + A I V+ ++V F+G+L S++
Sbjct: 808 EGQESKTDG---------FLFRFFKKVFAPFILTEWVRPVIVAVFVGMLSFSIA 852
>gi|13430254|gb|AAK25791.1|AF338230_1 Niemann-Pick disease C1 protein [Homo sapiens]
gi|2276463|gb|AAB63982.1| Niemann-Pick C disease protein [Homo sapiens]
gi|5714634|gb|AAD48006.1| Niemann-Pick C1 protein [Homo sapiens]
gi|119621563|gb|EAX01158.1| Niemann-Pick disease, type C1 [Homo sapiens]
Length = 1278
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 74/160 (46%), Gaps = 26/160 (16%)
Query: 11 YTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILI 70
Y + L++ G VL + S+ LSS ++VAFF +L +PA+ F+L A L
Sbjct: 709 YQRDERLQGETLDQQLGRVLGEVAPSMFLSSFSETVAFFLGALSVMPAVHTFSL-FAGLA 767
Query: 71 LFNMFVLLLVYPAIECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACKLKSYSEF---- 126
+F F+L I C+V SLLG D+ +E C ++ +
Sbjct: 768 VFIDFLL-----QITCFV--------SLLGLDI---KRQEKNRLDIFCCVRGAEDGTSVQ 811
Query: 127 ---SC--RYLARQHARLITRPGVKMIVVFGFIGVLIASVS 161
SC R+ ++ L+ + ++ IV+ F+GVL S++
Sbjct: 812 ASESCLFRFFKNSYSPLLLKDWMRPIVIAIFVGVLSFSIA 851
>gi|38649260|gb|AAH63302.1| Niemann-Pick disease, type C1 [Homo sapiens]
Length = 1278
Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 74/160 (46%), Gaps = 26/160 (16%)
Query: 11 YTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILI 70
Y + L++ G VL + S+ LSS ++VAFF +L +PA+ F+L A L
Sbjct: 709 YQRDERLQGETLDQQLGRVLGEVAPSMFLSSFSETVAFFLGALSVMPAVHTFSL-FAGLA 767
Query: 71 LFNMFVLLLVYPAIECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACKLKSYSEF---- 126
+F F+L I C+V SLLG D+ +E C ++ +
Sbjct: 768 VFIDFLL-----QITCFV--------SLLGLDI---KRQEKNRLDIFCCVRGAEDGTSVQ 811
Query: 127 ---SC--RYLARQHARLITRPGVKMIVVFGFIGVLIASVS 161
SC R+ ++ L+ + ++ IV+ F+GVL S++
Sbjct: 812 ASESCLFRFFKNSYSPLLLKDWMRPIVIAIFVGVLSFSIA 851
>gi|255652944|ref|NP_000262.2| Niemann-Pick C1 protein precursor [Homo sapiens]
gi|83305902|sp|O15118.2|NPC1_HUMAN RecName: Full=Niemann-Pick C1 protein; Flags: Precursor
Length = 1278
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 74/160 (46%), Gaps = 26/160 (16%)
Query: 11 YTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILI 70
Y + L++ G VL + S+ LSS ++VAFF +L +PA+ F+L A L
Sbjct: 709 YQRDERLQGETLDQQLGRVLGEVAPSMFLSSFSETVAFFLGALSVMPAVHTFSL-FAGLA 767
Query: 71 LFNMFVLLLVYPAIECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACKLKSYSEF---- 126
+F F+L I C+V SLLG D+ +E C ++ +
Sbjct: 768 VFIDFLL-----QITCFV--------SLLGLDI---KRQEKNRLDIFCCVRGAEDGTSVQ 811
Query: 127 ---SC--RYLARQHARLITRPGVKMIVVFGFIGVLIASVS 161
SC R+ ++ L+ + ++ IV+ F+GVL S++
Sbjct: 812 ASESCLFRFFKNSYSPLLLKDWMRPIVIAIFVGVLSFSIA 851
>gi|194380812|dbj|BAG58559.1| unnamed protein product [Homo sapiens]
Length = 776
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 74/160 (46%), Gaps = 26/160 (16%)
Query: 11 YTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILI 70
Y + L++ G VL + S+ LSS ++VAFF +L +PA+ F+L A L
Sbjct: 554 YQRDERLQGETLDQQLGRVLGEVAPSMFLSSFSETVAFFLGALSVMPAVHTFSL-FAGLA 612
Query: 71 LFNMFVLLLVYPAIECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACKLKSYSEF---- 126
+F F+L I C+V SLLG D+ +E C ++ +
Sbjct: 613 VFIDFLL-----QITCFV--------SLLGLDIK---RQEKNRLDIFCCVRGAEDGTSVQ 656
Query: 127 ---SC--RYLARQHARLITRPGVKMIVVFGFIGVLIASVS 161
SC R+ ++ L+ + ++ IV+ F+GVL S++
Sbjct: 657 ASESCLFRFFKNSYSPLLLKDWMRPIVIAIFVGVLSFSIA 696
>gi|296416499|ref|XP_002837915.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633804|emb|CAZ82106.1| unnamed protein product [Tuber melanosporum]
Length = 1237
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FLI F + + + V++ G + + G SI+LS+ C+++AF +++ +PA+R
Sbjct: 638 IFLIVHEFERVNYSHPDERVEVR--VGKTIGRMGPSILLSATCETIAFALGAVVSMPAVR 695
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F + A + N + + ++ A+
Sbjct: 696 NFAIYAAGAVFVNALLQVTMFVAV 719
>gi|358254448|dbj|GAA55284.1| Niemann-Pick C1 protein [Clonorchis sinensis]
Length = 1525
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 37/55 (67%)
Query: 30 LRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVYPAI 84
L + G S++LSS+ +SVAFF SL +PA+RVF L + ILFN+ + L + A+
Sbjct: 891 LGRVGPSLLLSSLTESVAFFFGSLTSMPAVRVFALYAGVAILFNLLLQLFAFVAL 945
>gi|67523325|ref|XP_659723.1| hypothetical protein AN2119.2 [Aspergillus nidulans FGSC A4]
gi|40745795|gb|EAA64951.1| hypothetical protein AN2119.2 [Aspergillus nidulans FGSC A4]
gi|259487493|tpe|CBF86215.1| TPA: conserved hypothetical protein similar to Neimann-Pick
sphingolipid transporter (Eurofung) [Aspergillus
nidulans FGSC A4]
Length = 1271
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 77/174 (44%), Gaps = 28/174 (16%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FLI F + + + +++E + + G SI LS++ ++VAF + +PA+R
Sbjct: 683 IFLIVYEFERLNVSHPDE--EIDERISRAIGRIGPSIFLSAITETVAFALGVFVGMPAVR 740
Query: 61 VFNLQLAILILFN------MF--VLLLVYPAIECWVGSAAP-----KDQSLLGEDLMTSD 107
F + A + N MF VL L +E P K S + EDL D
Sbjct: 741 NFAIYAAGAVFINAVLQITMFVSVLALNQKRVESLRADCIPCLTVRKAHSGMPEDLAFDD 800
Query: 108 EEEDEHTSSACKLKSYSEFSCRYLARQHARLITRPGVKMIVVFGFIGVLIASVS 161
++ + +++ + +A L+ VK++VV F+G+L A ++
Sbjct: 801 QDREGILQ-------------KFIRKVYAPLLLNRRVKVVVVITFLGILAAGLA 841
>gi|297801916|ref|XP_002868842.1| patched family protein [Arabidopsis lyrata subsp. lyrata]
gi|297314678|gb|EFH45101.1| patched family protein [Arabidopsis lyrata subsp. lyrata]
Length = 1064
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%)
Query: 14 KNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFN 73
K Q V L + L + G SI L+S+ + +AF + +P+PA R+F++ A+ I+ +
Sbjct: 644 KRQPRDVSLEQRISSALVEVGPSITLASLSEVLAFAVGAFVPMPACRIFSMFAALAIMLD 703
Query: 74 MFVLLLVYPAI 84
F+ + + A+
Sbjct: 704 FFLQITAFVAL 714
>gi|170037373|ref|XP_001846533.1| niemann-pick C1 [Culex quinquefasciatus]
gi|167880442|gb|EDS43825.1| niemann-pick C1 [Culex quinquefasciatus]
Length = 1645
Score = 39.3 bits (90), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++ +T + T K + E G +L + G SI+L++V +S FF L +PA+R
Sbjct: 916 IFILVQTHQRDTKK---PTETHAEHIGRILGRVGPSILLTAVSESCCFFLGGLSDMPAVR 972
Query: 61 VFNLQLAILILFNMFVLLLVY 81
F L + +L + F+ + +
Sbjct: 973 AFALYAGMALLIDFFLQITCF 993
>gi|353241520|emb|CCA73330.1| related to NCR1-transmembrane glycoprotein, involved in
sphingolipid metabolism [Piriformospora indica DSM
11827]
Length = 1399
Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 64/142 (45%), Gaps = 32/142 (22%)
Query: 32 KTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVYPA-------- 83
K G SI+LS+ ++VAF +++P+PA+R F L A + N + + V+ +
Sbjct: 827 KMGPSILLSTTTETVAFALGAMVPMPAVRNFALYAAGSVFLNALLQMTVFVSAMTIDLRR 886
Query: 84 -----IECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACKLKSYSEFSCRYLARQHARL 138
++C+ P +L D H S+ K+ R+ R++
Sbjct: 887 EEANRLDCFPCIRIPPRIALT-----------DGHVSTG-KIT-------RFFKRKYGPF 927
Query: 139 ITRPGVKMIVVFGFIGVLIASV 160
I + VK +++ F G+ +AS+
Sbjct: 928 ILQRSVKGVILLFFGGIFVASI 949
>gi|441603593|ref|XP_003262147.2| PREDICTED: niemann-Pick C1 protein [Nomascus leucogenys]
Length = 1328
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 74/160 (46%), Gaps = 26/160 (16%)
Query: 11 YTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILI 70
Y + L++ G VL + S+ LSS +++AFF +L +PA+ F+L A L
Sbjct: 760 YQRDERLQGETLDQQLGRVLGEVAPSMFLSSFSETIAFFLGALSVMPAVHTFSL-FAGLA 818
Query: 71 LFNMFVLLLVYPAIECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACKLKSYSEF---- 126
+F F+L I C+V SLLG D+ +E C ++ +
Sbjct: 819 VFIDFLL-----QITCFV--------SLLGLDI---KRQEKNRLDIFCCVRGAEDGTSVQ 862
Query: 127 ---SC--RYLARQHARLITRPGVKMIVVFGFIGVLIASVS 161
SC R+ ++ L+ + ++ IV+ F+GVL S++
Sbjct: 863 ASESCLFRFFKNSYSPLLLKDWMRPIVIAIFVGVLSFSIA 902
>gi|4539343|emb|CAB37491.1| putative protein [Arabidopsis thaliana]
gi|7270819|emb|CAB80500.1| putative protein [Arabidopsis thaliana]
Length = 1055
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%)
Query: 14 KNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFN 73
K Q V L + L + G SI L+S+ + +AF + +P+PA R+F++ A+ I+ +
Sbjct: 634 KRQPREVSLEQRISSALVEVGPSITLASLSEVLAFAVGAFVPMPACRIFSMFAALAIMLD 693
Query: 74 MFVLLLVYPAI 84
F+ + + A+
Sbjct: 694 FFLQITAFVAL 704
>gi|260814039|ref|XP_002601723.1| hypothetical protein BRAFLDRAFT_145309 [Branchiostoma floridae]
gi|229287025|gb|EEN57735.1| hypothetical protein BRAFLDRAFT_145309 [Branchiostoma floridae]
Length = 743
Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 78/182 (42%), Gaps = 34/182 (18%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
MF++ ++ K S+ + + E TG L +I ++S+ VAF ++ PA+R
Sbjct: 233 MFIMIASWRKTDSR-----LAVPERTGHALADAATAITITSLTDCVAFAVGTITVFPAVR 287
Query: 61 VFNLQLAILILFNMFVLLLVYPAIECWVGSAAPKDQSLL-------GEDL--MTS----- 106
+F + A+ + F+ + + AI G + L E+ M+S
Sbjct: 288 IFCIYAAVGVAFDYVYQITFFAAILSLAGRREKAGRHWLTCLKVPTNEEAGQMSSIKKLC 347
Query: 107 --------DEEEDEHTSSACKLKSYSEFSCRYLARQHARLITRPGVKMIVV---FGFIGV 155
D+ D+H+ +L ++ C YL A + P K++++ FG++GV
Sbjct: 348 CSGGNPAQDDVSDQHSDEDRRLPFMNKLLCNYL----APFVVNPLGKLLILLVFFGYLGV 403
Query: 156 LI 157
I
Sbjct: 404 AI 405
>gi|334187268|ref|NP_001190953.1| Patched family protein [Arabidopsis thaliana]
gi|332661517|gb|AEE86917.1| Patched family protein [Arabidopsis thaliana]
Length = 1297
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 72/151 (47%), Gaps = 11/151 (7%)
Query: 14 KNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFN 73
K Q V L + L + G SI L+S+ + +AF + +P+PA R+F++ A+ I+ +
Sbjct: 723 KRQPREVSLEQRISSALVEVGPSITLASLSEVLAFAVGAFVPMPACRIFSMFAALAIMLD 782
Query: 74 MFVLLLVYPAI---ECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACKLKSYSEFSCRY 130
F+ + + A+ +C SA + + +S E E L+ RY
Sbjct: 783 FFLQITAFVALIVFDC-KRSADNRIDCFPCIKVPSSSRESVEGGREPGFLE-------RY 834
Query: 131 LARQHARLITRPGVKMIVVFGFIGVLIASVS 161
+ HA ++ GVKM+VV F +AS++
Sbjct: 835 MKEVHAPVLGLWGVKMVVVAVFFAFALASIA 865
>gi|334187266|ref|NP_195548.6| Patched family protein [Arabidopsis thaliana]
gi|332661516|gb|AEE86916.1| Patched family protein [Arabidopsis thaliana]
Length = 1273
Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 72/151 (47%), Gaps = 11/151 (7%)
Query: 14 KNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFN 73
K Q V L + L + G SI L+S+ + +AF + +P+PA R+F++ A+ I+ +
Sbjct: 699 KRQPREVSLEQRISSALVEVGPSITLASLSEVLAFAVGAFVPMPACRIFSMFAALAIMLD 758
Query: 74 MFVLLLVYPAI---ECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACKLKSYSEFSCRY 130
F+ + + A+ +C SA + + +S E E L+ RY
Sbjct: 759 FFLQITAFVALIVFDC-KRSADNRIDCFPCIKVPSSSRESVEGGREPGFLE-------RY 810
Query: 131 LARQHARLITRPGVKMIVVFGFIGVLIASVS 161
+ HA ++ GVKM+VV F +AS++
Sbjct: 811 MKEVHAPVLGLWGVKMVVVAVFFAFALASIA 841
>gi|50312503|ref|XP_456287.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49645423|emb|CAG98995.1| KLLA0F27137p [Kluyveromyces lactis]
Length = 1177
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FLIT F + S + S + E + + K SI+ S +C+ F A+++ +PA+R
Sbjct: 636 IFLITHEFDRVNS--HYSSSTIQEKIVLSIGKISPSILFSFLCQGGCFLLATMVEMPAVR 693
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F + A+ + FN+ + L Y I
Sbjct: 694 NFAICAAVALCFNVVLQLTSYVCI 717
>gi|410923889|ref|XP_003975414.1| PREDICTED: niemann-Pick C1 protein-like [Takifugu rubripes]
Length = 1273
Score = 38.9 bits (89), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 65/141 (46%), Gaps = 23/141 (16%)
Query: 27 GIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVYPAIEC 86
G +L S+ LSS ++VAFF +L +PA+R F+L A L +F F+L I C
Sbjct: 729 GRILGDVAPSMFLSSFSETVAFFLGALSNMPAVRTFSL-FAGLAVFIDFLL-----QISC 782
Query: 87 WVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACKLKSYSE------FSCRYLARQHARLIT 140
+V SLLG D + +E C +K E F + + +A I
Sbjct: 783 FV--------SLLGLD---ASRQEGNRMDIVCCVKIQGEEVKKDSFLFLFFKKIYAPFIL 831
Query: 141 RPGVKMIVVFGFIGVLIASVS 161
V+ VV F+G+L S++
Sbjct: 832 NDWVRPFVVAVFVGMLSFSIA 852
>gi|255071203|ref|XP_002507683.1| predicted protein [Micromonas sp. RCC299]
gi|226522958|gb|ACO68941.1| predicted protein [Micromonas sp. RCC299]
Length = 2618
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 32/53 (60%)
Query: 31 RKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVYPA 83
RKTG ++ +++ + +F S IPALR+F L + + ++ N +L V+P+
Sbjct: 1778 RKTGSAMFVTTTTSACSFASNIASKIPALRIFGLSICVCVVVNFIFVLTVFPS 1830
>gi|255082742|ref|XP_002504357.1| resistance-nodulation-cell division superfamily [Micromonas sp.
RCC299]
gi|226519625|gb|ACO65615.1| resistance-nodulation-cell division superfamily [Micromonas sp.
RCC299]
Length = 1523
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F+ T+A+ T D L G +++++S + AF S IPA+R
Sbjct: 512 VFVFYNTYAQATRAVGRDG-DLTARLSYAYEHAGRAMLVTSFTSAAAFCSNLASAIPAVR 570
Query: 61 VFNLQLAILILFNMFVLLLVYPA-IECW 87
VF + LA+++ N +++ +PA I CW
Sbjct: 571 VFGVFLAVMVGANYVLVVTWFPACIACW 598
>gi|157135836|ref|XP_001656693.1| niemann-pick C1 [Aedes aegypti]
gi|108881150|gb|EAT45375.1| AAEL003325-PA, partial [Aedes aegypti]
Length = 1132
Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++ +T + T K + E G +L + G SI+L++V +S FF L +PA+R
Sbjct: 408 IFILVQTHQRDTKK---PTETHAEHIGRILGRVGPSILLTAVSESCCFFLGGLSDMPAVR 464
Query: 61 VFNLQLAILILFNMFV 76
F L + +L + F+
Sbjct: 465 AFALYAGMALLIDFFL 480
>gi|402219971|gb|EJU00044.1| multidrug efflux transporter AcrB transmembrane domain-containing
protein [Dacryopinax sp. DJM-731 SS1]
Length = 1333
Score = 38.5 bits (88), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 30 LRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVY 81
L K G SI LS+V + VAF +L+P+PA+R F L A +L + + + V+
Sbjct: 760 LAKMGPSIFLSTVTEVVAFGLGALVPMPAVRNFALYAAGSVLLDGLLQMTVF 811
>gi|94264374|ref|ZP_01288165.1| exporter, RND superfamily [delta proteobacterium MLMS-1]
gi|93455203|gb|EAT05419.1| exporter, RND superfamily [delta proteobacterium MLMS-1]
Length = 883
Score = 38.5 bits (88), Expect = 0.99, Method: Composition-based stats.
Identities = 23/82 (28%), Positives = 44/82 (53%), Gaps = 7/82 (8%)
Query: 3 LITKTFAKY-TSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRV 61
+++ F KY S+N+ ++K V+ ++ +S+ + F S +L PIP +RV
Sbjct: 298 ILSDFFDKYQKSRNREKTIKE------VMDHLFTPMLFTSITSAAGFASLALTPIPPVRV 351
Query: 62 FNLQLAILILFNMFVLLLVYPA 83
F + +AI I+ + +L+ PA
Sbjct: 352 FGIFVAIGIILAWLITILLIPA 373
>gi|431909936|gb|ELK13032.1| Niemann-Pick C1-like protein 1 [Pteropus alecto]
Length = 1566
Score = 38.5 bits (88), Expect = 1.00, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 33/58 (56%)
Query: 27 GIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVYPAI 84
G L + G S++L S +++ FF +L P+PA+R F L + ++ + + + + A+
Sbjct: 975 GRALGRVGPSMLLCSASEAICFFMGALTPMPAVRTFALTSGVAVILDFLLQVSAFVAL 1032
>gi|350539673|ref|NP_001233616.1| Niemann-Pick C1 protein precursor [Cricetulus griseus]
gi|6934272|gb|AAF31692.1|AF182744_1 Niemann-Pick type C1 protein [Cricetulus griseus]
Length = 1277
Score = 38.5 bits (88), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 76/167 (45%), Gaps = 23/167 (13%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++ +T Y + L++ G +L + ++ LSS ++ AFF +L +PA+
Sbjct: 702 IFILVQT---YQRDERLQEETLDQQLGRILGEVAPTMFLSSFSETSAFFFGALSSMPAVH 758
Query: 61 VFNLQLAILILFNMFVLLLVYPAIECWVGSAAPKDQSLLGEDLMTSDEEEDE------HT 114
F+L + +L + + I C+V SLLG D+ ++ + T
Sbjct: 759 TFSLFAGLAVLIDFLL------QITCFV--------SLLGLDIKRQEKNRLDILCCVGGT 804
Query: 115 SSACKLKSYSEFSCRYLARQHARLITRPGVKMIVVFGFIGVLIASVS 161
+ +++ + R+ A + + ++ IV+ F+GVL S++
Sbjct: 805 DNGRGIQASESYLFRFFKNSFAPFLLKDWLRPIVIAVFVGVLSFSIA 851
>gi|94270778|ref|ZP_01291822.1| exporter, RND superfamily [delta proteobacterium MLMS-1]
gi|93450667|gb|EAT01763.1| exporter, RND superfamily [delta proteobacterium MLMS-1]
Length = 883
Score = 38.5 bits (88), Expect = 1.00, Method: Composition-based stats.
Identities = 23/82 (28%), Positives = 44/82 (53%), Gaps = 7/82 (8%)
Query: 3 LITKTFAKY-TSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRV 61
+++ F KY S+N+ ++K V+ ++ +S+ + F S +L PIP +RV
Sbjct: 298 ILSDFFDKYQKSRNREKTIKE------VMDHLFTPMLFTSITSAAGFASLALTPIPPVRV 351
Query: 62 FNLQLAILILFNMFVLLLVYPA 83
F + +AI I+ + +L+ PA
Sbjct: 352 FGIFVAIGIILAWLITILLIPA 373
>gi|297570175|ref|YP_003691519.1| RND superfamily exporter [Desulfurivibrio alkaliphilus AHT2]
gi|296926090|gb|ADH86900.1| RND superfamily exporter [Desulfurivibrio alkaliphilus AHT2]
Length = 908
Score = 38.5 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 29 VLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVYPA 83
V+ + + +I +S+ +V F S +L PIP ++VF L +AI IL +L+ PA
Sbjct: 319 VMDELFVPMIFTSLTSAVGFASLALTPIPPVQVFGLFVAIGILIAWLTTILLVPA 373
>gi|367007808|ref|XP_003688633.1| hypothetical protein TPHA_0P00410 [Tetrapisispora phaffii CBS 4417]
gi|357526943|emb|CCE66199.1| hypothetical protein TPHA_0P00410 [Tetrapisispora phaffii CBS 4417]
Length = 1183
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FLIT + + N S+ + + + + SI+LS +C+ F AS + +PA+R
Sbjct: 639 IFLITNEYDRICITNP--SLDIKQRIVFAVGRISPSILLSYICQVSCFLIASFVTMPAVR 696
Query: 61 VFNLQLAILILFNMFVLLLVYPAI 84
F L A+ I FN + L Y A+
Sbjct: 697 NFALYSALAITFNAILQLTSYVAV 720
>gi|330502125|ref|YP_004378994.1| hydrophobe/amphiphile efflux-1 (HAE1) family protein [Pseudomonas
mendocina NK-01]
gi|328916411|gb|AEB57242.1| hydrophobe/amphiphile efflux-1 (HAE1) family protein [Pseudomonas
mendocina NK-01]
Length = 1043
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 40/135 (29%), Positives = 67/135 (49%), Gaps = 19/135 (14%)
Query: 22 LNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVY 81
+ E TG V+ G++++L++V +AF S S+ I + F L +A+ ILF+ F+ L +
Sbjct: 435 MKEITGAVI---GITLVLTAVFIPMAFASGSVGVI--YQQFTLSMAVSILFSAFLALTLT 489
Query: 82 PAIECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACKLKSYSEFSCRYLARQHARLITR 141
PA+ C +LL +++D E A + + + RY R +RL+ R
Sbjct: 490 PAL-C---------ATLLRP--VSADHHEKRGFFGAFN-RGFERLTERYTGRV-SRLVGR 535
Query: 142 PGVKMIVVFGFIGVL 156
G M+V GVL
Sbjct: 536 SGRMMVVFMLLCGVL 550
>gi|426198106|gb|EKV48032.1| hypothetical protein AGABI2DRAFT_202338 [Agaricus bisporus var.
bisporus H97]
Length = 1381
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 25/143 (17%)
Query: 29 VLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVYPAIECWV 88
L K G SI+LS++ +++AF +L+P+PA+R F L A +L N + + V+ +
Sbjct: 796 TLAKMGPSILLSTITETLAFALGALVPMPAVRNFALYAAGSVLINAILQVTVF------I 849
Query: 89 GSAAPKDQSLLGEDLMTSDEEE-------------DEHTSSACKLKSYSEFSCRYLARQH 135
G+ LL + S+ + E ++S+ L + F RY A
Sbjct: 850 GAL------LLDLKRVESNRVDCFPCIRLSSRIALPETSASSSGLGRIARFIRRYYAPFL 903
Query: 136 ARLITRPGVKMIVVFGFIGVLIA 158
+T+ V +I V GF+ +I+
Sbjct: 904 MNSVTKACVVIIFVGGFVASVIS 926
>gi|145342088|ref|XP_001416127.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576351|gb|ABO94419.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 1011
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/56 (25%), Positives = 34/56 (60%)
Query: 32 KTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVYPAIECW 87
+ ++ L+S+ + AF+S ++IPI +RVF + + +++F+ + ++ A+ W
Sbjct: 455 DSAWAMFLTSMTTAAAFYSNAIIPIAPIRVFAIFMGTMVIFDYLYDITIFAALLAW 510
>gi|330801045|ref|XP_003288541.1| hypothetical protein DICPUDRAFT_47976 [Dictyostelium purpureum]
gi|325081391|gb|EGC34908.1| hypothetical protein DICPUDRAFT_47976 [Dictyostelium purpureum]
Length = 1359
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 79/201 (39%), Gaps = 43/201 (21%)
Query: 1 MFLITKTF-----AKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIP 55
+F+I TF +Y+ Q + E L + G SI L+S+ +S+AF SL
Sbjct: 773 IFIIVNTFESIHITRYSPSGQQINPIPEESLAKTLSQVGPSIALASLSESLAFLLGSLTN 832
Query: 56 IPALRVFNLQLAILILFNMFVLLLVYPAIECWVGSAAPKDQS--------LLGEDLMTSD 107
+PA++ F+ +I + F+ LL A C + + QS + D SD
Sbjct: 833 MPAVQAFSFYASIAVFFD---FLLQITAFSCLLVLDCKRTQSRRIDCFPCIRLNDTENSD 889
Query: 108 E---------EEDEH------------------TSSACKLKSYSEFSCRYLARQHARLIT 140
+ EEDE+ +K S + +A +
Sbjct: 890 DEDEKKPLFNEEDENGLLEDSDALNVVDGIIPRNQQVKPIKKKSTLLQVLFKKYYAPFLM 949
Query: 141 RPGVKMIVVFGFIGVLIASVS 161
P VK+ VV F+ +L+ S++
Sbjct: 950 NPLVKLFVVIIFVAMLLTSIN 970
>gi|224046161|ref|XP_002195198.1| PREDICTED: niemann-Pick C1 protein [Taeniopygia guttata]
Length = 1280
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 60/127 (47%), Gaps = 20/127 (15%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++ +T + + L++ G VL S+ LSS ++VAFF +L +PA+R
Sbjct: 705 IFIMVQTLQR---DERLQGETLDKQIGRVLGDVAPSMFLSSFSETVAFFLGTLSTMPAVR 761
Query: 61 VFNLQLAILILFNMFVLLLVYPAIECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACKL 120
F+L + +L + F+L + C+V SLLG D+ +E C +
Sbjct: 762 TFSLFAGMAVLID-FIL-----QVTCFV--------SLLGLDI---KRQESNRLDVLCCI 804
Query: 121 KSYSEFS 127
KS E S
Sbjct: 805 KSSEEMS 811
>gi|344269954|ref|XP_003406812.1| PREDICTED: niemann-Pick C1 protein [Loxodonta africana]
Length = 1265
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 83/170 (48%), Gaps = 29/170 (17%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++ +T+ + ++Q ++ L++ G VL + S+ LSS ++ AFF L +PA+
Sbjct: 690 IFILVQTYQR-DERHQGET--LDQQVGRVLGEVAPSMFLSSFSETAAFFLGGLSVMPAVH 746
Query: 61 VFNLQLAILILFNMFVLLLVYPAIECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACKL 120
F+L A + +F F+L + C+V SLLG D+ +E C +
Sbjct: 747 TFSL-FAGMAVFIDFLLQMT-----CFV--------SLLGLDI---KRQEKNRLDILCCV 789
Query: 121 KSYSEF-------SC--RYLARQHARLITRPGVKMIVVFGFIGVLIASVS 161
+ + SC R+ ++ L+ + ++ IVV F+GVL S++
Sbjct: 790 RGADDGASVQASESCLFRFFKNSYSPLLLKDWMRPIVVAIFVGVLSFSIA 839
>gi|58267588|ref|XP_570950.1| vacuolar membrane protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|57227184|gb|AAW43643.1| vacuolar membrane protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1330
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 32 KTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVY 81
+ G SI+LSSV + VAF +L+P+PA+R F + A +LF + V+
Sbjct: 759 RMGPSIMLSSVTEVVAFALGALVPMPAVRNFAIYAAGSVLFGAIMQCTVF 808
>gi|406861616|gb|EKD14670.1| patched sphingolipid transporter [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 1279
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 72/177 (40%), Gaps = 30/177 (16%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FLI F + + + V+ L + G SI+LS+V +++AF + + +PA+R
Sbjct: 686 IFLIVHEFERVNVSHPDEMVEFR--IAKALGRMGPSILLSAVTETIAFSLGAFVGMPAVR 743
Query: 61 VFNLQLAILILFN------MFVLLLVY----------PAIECWVGSAAPKDQSLLGEDLM 104
F + A + N MF+ +L I C +A G M
Sbjct: 744 NFAIYAAGAVFINALLQVTMFISVLTLNQKRVEDRRADCIPCIQIKSAGVHLPSTGNGYM 803
Query: 105 TSDEEEDEHTSSACKLKSYSEFSCRYLARQHARLITRPGVKMIVVFGFIGVLIASVS 161
E ++E T R++ + +A + VKM VV F+G+ A VS
Sbjct: 804 RPYEGQEEGTLQ------------RFIRKTYAPTLLDKKVKMAVVVIFLGIFTAGVS 848
>gi|134111997|ref|XP_775534.1| hypothetical protein CNBE2480 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258193|gb|EAL20887.1| hypothetical protein CNBE2480 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1330
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 32 KTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVY 81
+ G SI+LSSV + VAF +L+P+PA+R F + A +LF + V+
Sbjct: 759 RMGPSIMLSSVTEVVAFALGALVPMPAVRNFAIYAAGSVLFGAIMQCTVF 808
>gi|356553425|ref|XP_003545057.1| PREDICTED: niemann-Pick C1 protein-like [Glycine max]
Length = 1328
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 65/148 (43%), Gaps = 3/148 (2%)
Query: 14 KNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFN 73
K Q + + E + + G SI L+S+ + +AF S + +PA RVF++ A+ +L +
Sbjct: 748 KRQPSGLPVEEQISNAMGEVGPSITLASLSEILAFAVGSFVSMPACRVFSMIAALAVLLD 807
Query: 74 MFVLLLVYPAIECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACKLKSYSEFSCRYLAR 133
+ + + A+ A KD + M + E + RY+
Sbjct: 808 FLLQITAFVALVTLDFMRA-KDNRIDCFPCMKLNPPSAERNEGV--RRERDGLLTRYMKE 864
Query: 134 QHARLITRPGVKMIVVFGFIGVLIASVS 161
HA + GVK++V+ F +AS++
Sbjct: 865 VHAPFLGLCGVKILVIAVFAAFTLASIA 892
>gi|308807611|ref|XP_003081116.1| dispatched homolog 1 (ISS) [Ostreococcus tauri]
gi|116059578|emb|CAL55285.1| dispatched homolog 1 (ISS) [Ostreococcus tauri]
Length = 857
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 34/56 (60%)
Query: 32 KTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVYPAIECW 87
+ ++ L+S+ + AFFS ++IPI +RVF + + +++F+ + ++ A+ W
Sbjct: 303 DSAWAMFLTSLTTAAAFFSNAVIPIAPIRVFAVFMGAMVVFDYLYDITIFAAMIAW 358
>gi|47211655|emb|CAF94908.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1251
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 16 QFDS--VKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFN 73
+FD +L+E G+ L+ LS+ ++S + AF++ + I A+R F + IL N
Sbjct: 643 KFDKPRAELSETVGMTLQHAALSMFVTSFTTAAAFYANYVSNITAIRCFGVYAGTAILVN 702
Query: 74 MFVLLLVYPAI 84
+++ PA+
Sbjct: 703 YVLMVTWLPAV 713
>gi|351709751|gb|EHB12670.1| Niemann-Pick C1 protein [Heterocephalus glaber]
Length = 1311
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 75/170 (44%), Gaps = 29/170 (17%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++ +T Y + L++ G VL + S+ LSS C++ FF L +PA+
Sbjct: 736 IFILVQT---YQRDERLQGETLDQQLGRVLGEVAPSMFLSSFCETTVFFLGGLSLMPAVH 792
Query: 61 VFNLQLAILILFNMFVLLLVYPAIECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACKL 120
F+L + +L + + I C++ SLLG D+ +E C +
Sbjct: 793 TFSLFAGMAVLIDFLL------QISCFM--------SLLGMDI---KRQEKNRLDILCCV 835
Query: 121 KSYSEF-------SC--RYLARQHARLITRPGVKMIVVFGFIGVLIASVS 161
+ + C R+ ++ L+ + ++ +V+ F+GVL S++
Sbjct: 836 RGADDGRSIQASKGCLFRFFKNSYSPLLLKDWMRPLVIAVFVGVLSFSIA 885
>gi|281210580|gb|EFA84746.1| Niemann-Pick C type protein [Polysphondylium pallidum PN500]
Length = 1313
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 76/184 (41%), Gaps = 33/184 (17%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++ TF + + + L K G S+ L+S+ +S+AF L +PA+
Sbjct: 741 IFILVNTFESIHVRTATEHPAPEQSLACALAKVGPSMALASLSESLAFLLGMLTKMPAVV 800
Query: 61 VFNLQLAILILFN------MFVLLLVYPA-------IECW----VGSAAPKDQSLLGEDL 103
F+L ++ I F+ +F LLV I+C + AP D
Sbjct: 801 AFSLYASVAIFFDFLLQISIFACLLVIDTRRHESRRIDCLPCVALNDGAPSDD------- 853
Query: 104 MTSDEEEDEHTSSACKLKSYSEFS-----CRYLARQ-HARLITRPGVKMIVVFGFIGVLI 157
DE E + ++ Y + +Y + +A + P VK++ + F+G+L+
Sbjct: 854 ---DEPEQQPLVASTNSSDYVTYKKKDGLLKYAFKTYYAPFLMHPVVKVVSLLFFVGLLL 910
Query: 158 ASVS 161
++
Sbjct: 911 TGIT 914
>gi|297846716|ref|XP_002891239.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337081|gb|EFH67498.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 1261
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 74/158 (46%), Gaps = 23/158 (14%)
Query: 14 KNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFN 73
K Q + L L + G SI L+S+ + +AF + I +PA+RVF++ A+ +L +
Sbjct: 685 KRQEQELPLERRISNALMEVGPSITLASLAEILAFAVGAFIKMPAVRVFSMFAALAVLLD 744
Query: 74 MFVLLLVYPAIECWVGSAAPKDQSLLGEDLMTSDEEED--------EHTSSACK--LKSY 123
+ + + A+ ++ + T D+ D + ++SA K +
Sbjct: 745 FLLQITAFVAL-------------IVFDFQRTEDKRVDCFPCIKTSKSSNSADKGVGQRK 791
Query: 124 SEFSCRYLARQHARLITRPGVKMIVVFGFIGVLIASVS 161
+ RY+ HA +++ VK++V+ F G+ +A ++
Sbjct: 792 AGLLTRYMKEVHAPVLSHWAVKILVIAFFFGLAMAGIA 829
>gi|115399096|ref|XP_001215137.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114192020|gb|EAU33720.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 1263
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 81/174 (46%), Gaps = 28/174 (16%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+FLI F + + + ++++ + G SI LS++ ++VAF + + +PA+R
Sbjct: 675 IFLIVHEFERINVSHPDE--EIDQRIARAAGRIGPSIFLSAITETVAFALGAFVGMPAVR 732
Query: 61 VFNLQLAILILFNMFVLLLVYPAI-------------ECWVGSAAPKDQSLLGEDLMTSD 107
F + A + N + + ++ ++ +C+ K S + ED + D
Sbjct: 733 NFAVYAAGAVFINALLQITMFISVLALNQRRVESLRADCFPCVTVRKAHSGMPEDHIY-D 791
Query: 108 EEEDEHTSSACKLKSYSEFSCRYLARQHARLITRPGVKMIVVFGFIGVLIASVS 161
E++ E SA + +++ + +A + R G K+I+V F+G+ A ++
Sbjct: 792 EQDGE---SALQ---------KFIRKVYATNLLRRGAKVIIVLVFLGLFTAGLA 833
>gi|405120759|gb|AFR95529.1| vacuolar membrane protein [Cryptococcus neoformans var. grubii H99]
Length = 1334
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 32 KTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVY 81
+ G SI+LSSV + VAF +L+P+PA+R F + A +LF + V+
Sbjct: 761 RMGPSIMLSSVTEVVAFALGALVPMPAVRNFAVYAAGSVLFGAIMQCTVF 810
>gi|363730918|ref|XP_419162.3| PREDICTED: niemann-Pick C1 protein [Gallus gallus]
Length = 1286
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 5/74 (6%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F+I +T + + + L++ G VL S+ LSS ++VAFF +L +PA+R
Sbjct: 711 LFIIVQTLQR---DERLEGETLDKQIGRVLGDVAPSMFLSSFSETVAFFLGTLSTMPAVR 767
Query: 61 VFNL--QLAILILF 72
F+L +A+LI F
Sbjct: 768 TFSLFAGMAVLIDF 781
>gi|393909201|gb|EJD75356.1| niemann-Pick C1 protein [Loa loa]
Length = 1328
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 36 SIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVYPAI 84
S++LSS+ + + FF +L +PA++VF+L A+ I FN F+ + + AI
Sbjct: 768 SMLLSSLSECLCFFVGALSSMPAVKVFSLYAALAIFFNFFLQITCFLAI 816
>gi|158297016|ref|XP_317322.4| AGAP008137-PA [Anopheles gambiae str. PEST]
gi|157014992|gb|EAA12360.4| AGAP008137-PA [Anopheles gambiae str. PEST]
Length = 1192
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++ +T + T K + E G +L + G SI+L+SV +S FF L +PA+R
Sbjct: 605 IFILVQTHQRDTKK---PTETHAEHIGRILGRVGPSILLTSVSESCCFFLGGLSDMPAVR 661
Query: 61 VFNLQLAILILFNMFVL 77
F L + +L + F+L
Sbjct: 662 AFALYAGMALLID-FIL 677
>gi|24528557|ref|NP_733481.1| protein dispatched homolog 2 [Mus musculus]
gi|81866449|sp|Q8CIP5.1|DISP2_MOUSE RecName: Full=Protein dispatched homolog 2
gi|24324266|gb|AAN52162.1| dispatched B [Mus musculus]
Length = 1345
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%)
Query: 13 SKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILF 72
S+ Q S + G + G +++S + S AF+ + L +PA+R F L + +L
Sbjct: 524 SRGQVPSGGMPHRVGRTMHHFGYLLLVSGLTTSAAFYGSYLSRLPAVRCFALFMGTAVLV 583
Query: 73 NMFVLLLVYPA 83
+M + LL PA
Sbjct: 584 HMGLTLLWLPA 594
>gi|383790178|ref|YP_005474752.1| putative RND superfamily exporter [Spirochaeta africana DSM 8902]
gi|383106712|gb|AFG37045.1| putative RND superfamily exporter [Spirochaeta africana DSM 8902]
Length = 929
Score = 37.4 bits (85), Expect = 1.9, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 30/51 (58%)
Query: 34 GLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVYPAI 84
G I+L + +VAFFS L PA++ F + + ++ + +LL++PA+
Sbjct: 390 GTPIMLGGITTAVAFFSLILASAPAIKEFGIVAGMGVIITLITMLLLFPAL 440
>gi|312069642|ref|XP_003137777.1| hypothetical protein LOAG_02191 [Loa loa]
Length = 1241
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 36 SIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVYPAI 84
S++LSS+ + + FF +L +PA++VF+L A+ I FN F+ + + AI
Sbjct: 681 SMLLSSLSECLCFFVGALSSMPAVKVFSLYAALAIFFNFFLQITCFLAI 729
>gi|110002503|gb|AAI18527.1| Dispatched homolog 2 (Drosophila) [Mus musculus]
gi|148695974|gb|EDL27921.1| dispatched homolog 2 (Drosophila), isoform CRA_c [Mus musculus]
Length = 1345
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%)
Query: 13 SKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILF 72
S+ Q S + G + G +++S + S AF+ + L +PA+R F L + +L
Sbjct: 524 SRGQVPSGGMPHRVGRTMHHFGYLLLVSGLTTSAAFYGSYLSRLPAVRCFALFMGTAVLV 583
Query: 73 NMFVLLLVYPA 83
+M + LL PA
Sbjct: 584 HMGLTLLWLPA 594
>gi|339498927|ref|YP_004696962.1| hypothetical protein Spica_0288 [Spirochaeta caldaria DSM 7334]
gi|338833276|gb|AEJ18454.1| hypothetical protein Spica_0288 [Spirochaeta caldaria DSM 7334]
Length = 885
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 12/124 (9%)
Query: 30 LRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVYPAIECWVG 89
L+K L ++L+ V V FFS PI L+ F + +I + F + + LL+ PA +
Sbjct: 316 LKKVVLPVVLAGVTTIVGFFSTVTSPIVPLKTFAIFSSIGVTFALILSLLLIPAF--LIV 373
Query: 90 SAAPKDQSLLGEDLMTSDEEEDEHTSSACKLKSYSEFSCRYLARQHARLITRPGVKMIVV 149
PKD L ++ TS + E + L S + HA V + VV
Sbjct: 374 KPLPKDGKL---NIKTSHRKNYEKGIDSTNLGVRSAAKLNNVLHDHA-------VTVGVV 423
Query: 150 FGFI 153
GFI
Sbjct: 424 IGFI 427
>gi|302696991|ref|XP_003038174.1| hypothetical protein SCHCODRAFT_46894 [Schizophyllum commune H4-8]
gi|300111871|gb|EFJ03272.1| hypothetical protein SCHCODRAFT_46894 [Schizophyllum commune H4-8]
Length = 1374
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 32/52 (61%)
Query: 30 LRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVY 81
L K G SI+LS+ +++AF +++P+PA+R F L A + N + + V+
Sbjct: 798 LAKMGPSILLSATTETIAFALGAIVPMPAVRNFALYAAGSVFLNAVLQVTVF 849
>gi|148695972|gb|EDL27919.1| dispatched homolog 2 (Drosophila), isoform CRA_a [Mus musculus]
Length = 1171
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%)
Query: 13 SKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILF 72
S+ Q S + G + G +++S + S AF+ + L +PA+R F L + +L
Sbjct: 350 SRGQVPSGGMPHRVGRTMHHFGYLLLVSGLTTSAAFYGSYLSRLPAVRCFALFMGTAVLV 409
Query: 73 NMFVLLLVYPA 83
+M + LL PA
Sbjct: 410 HMGLTLLWLPA 420
>gi|326917537|ref|XP_003205055.1| PREDICTED: Niemann-Pick C1 protein-like [Meleagris gallopavo]
Length = 1303
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 76/167 (45%), Gaps = 33/167 (19%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F+I +T + + + L++ G VL S+ LSS ++VAFF +L +PA+R
Sbjct: 728 IFIIVQTLQR---DERLEGETLDKQIGRVLGDVAPSMFLSSFSETVAFFLGTLSTMPAVR 784
Query: 61 VFNLQLAILILFNMFVLLLVYPAIECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACKL 120
F+L + +L + F+L + C+V SLLG D+ +E C +
Sbjct: 785 TFSLFAGMAVLID-FIL-----QVTCFV--------SLLGLDIR---RQERNRLDILCCI 827
Query: 121 KSYSEFSCRYLARQHARL-----------ITRPGVKMIVVFGFIGVL 156
K E R + R + L + + ++ IV+ F+GVL
Sbjct: 828 KGSEEM--RGVQRSESILFLFFKNLYSPYLLKDWMRPIVIALFVGVL 872
>gi|321259187|ref|XP_003194314.1| vacuolar membrane protein [Cryptococcus gattii WM276]
gi|317460785|gb|ADV22527.1| Vacuolar membrane protein, putative [Cryptococcus gattii WM276]
Length = 1334
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 32 KTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFN 73
+ G SI+LSSV + VAF +L+P+PA+R F + A +LF
Sbjct: 761 RMGPSIMLSSVTEVVAFALGALVPMPAVRNFAIYAAGSVLFG 802
>gi|308812702|ref|XP_003083658.1| novel protein (ISS) [Ostreococcus tauri]
gi|116055539|emb|CAL58207.1| novel protein (ISS), partial [Ostreococcus tauri]
Length = 853
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Query: 15 NQFDSVKLN----ECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILI 70
N +D+V+ E G LR G+S+ ++S+ +AF S +PAL+ F A+ I
Sbjct: 392 NAYDNVEARVDPVERMGRTLRYAGMSVTVTSITDVIAFLIGSSTSLPALKNFCYYAALGI 451
Query: 71 LFNMFVLLLVYPA 83
F+ F + + A
Sbjct: 452 FFDYFYQVTFFTA 464
>gi|448388304|ref|ZP_21565159.1| hypothetical protein C477_02965 [Haloterrigena salina JCM 13891]
gi|445670440|gb|ELZ23040.1| hypothetical protein C477_02965 [Haloterrigena salina JCM 13891]
Length = 872
Score = 37.4 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 33 TGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVYPA-IECWV 88
TG +++ S+V + F L +PALR F + LAI I + ++V P+ + CWV
Sbjct: 797 TGGALLSSAVTTAAGFGVLGLALLPALRQFGISLAIGIAYAFLASVVVLPSLLACWV 853
>gi|332235162|ref|XP_003266776.1| PREDICTED: LOW QUALITY PROTEIN: protein dispatched homolog 2
[Nomascus leucogenys]
Length = 1402
Score = 37.4 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 38/71 (53%)
Query: 13 SKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILF 72
SK+Q S L + G + G +++S + S AF+++ L +PA+R L + +L
Sbjct: 570 SKSQLPSGGLAQRVGRTMHHFGYLLLVSGLTTSAAFYASYLSRLPAVRCLALFMGTAVLV 629
Query: 73 NMFVLLLVYPA 83
++ V L+ PA
Sbjct: 630 HLAVTLVWLPA 640
>gi|223997704|ref|XP_002288525.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220975633|gb|EED93961.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 1055
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 12 TSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILIL 71
++++ S + + L +++L+S +VAFF +L P+ + F + +LI+
Sbjct: 572 NARHELPSGTTEQIAALALPDAAYAMLLTSTTTAVAFFGTALCPVAPIVAFAVFCGLLII 631
Query: 72 FNMFV-LLLVYPAI---ECWV--GSAAP 93
F+ + + LV+PA+ + W+ GS P
Sbjct: 632 FDYLMNIFLVFPALCLYDTWLLRGSKNP 659
>gi|443899210|dbj|GAC76541.1| cholesterol transport protein [Pseudozyma antarctica T-34]
Length = 1481
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 70/161 (43%), Gaps = 28/161 (17%)
Query: 13 SKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILF 72
S +Q + + E L + G SI+LS+ + VAF +++P+PA+R F L A +L
Sbjct: 877 SAHQIMRLTIEERAARCLARVGPSILLSATTQIVAFLLGAMVPMPAVRNFALYAAGSMLI 936
Query: 73 ------NMFVLLLVYPA-------IECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACK 119
+F+ + A ++C AP QS TSD T+S
Sbjct: 937 VAVMHCTVFIAAMALDAHRVEGGRVDCLPCLKAPHQQS----HARTSDST--AATTSEAG 990
Query: 120 LKSYSEFSCRYLARQHARLITRPGVKMIVV--FGFIGVLIA 158
L + RY + A + RP K +VV FG I V+ A
Sbjct: 991 LDHF----IRY---RFAPSLLRPWTKRLVVVAFGAIAVMSA 1024
>gi|334325862|ref|XP_001365874.2| PREDICTED: niemann-Pick C1 protein [Monodelphis domestica]
Length = 1437
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 58/110 (52%), Gaps = 17/110 (15%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++ +TF + + L++ G +L + S++LSS +++AFF +L +PA+R
Sbjct: 862 IFILVQTFQR---DERLQGETLDKQLGRILGEVAPSMLLSSFSEAIAFFLGALSTMPAVR 918
Query: 61 VFNLQLAILILFNMFVLLLVYPAIECWVGSAAPKDQSLLGEDLMTSDEEE 110
F+L A + +F F+L I C+V SLLG D+ ++ +
Sbjct: 919 TFSL-FAGMAVFIDFLL-----QITCFV--------SLLGLDIKRQEKNK 954
>gi|307354879|ref|YP_003895930.1| hydrophobe/amphiphile efflux-3 family efflux transporter
[Methanoplanus petrolearius DSM 11571]
gi|307158112|gb|ADN37492.1| efflux transporter, , hydrophobe/amphiphile efflux-3 (HAE3) family
[Methanoplanus petrolearius DSM 11571]
Length = 722
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 38/77 (49%)
Query: 30 LRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVYPAIECWVG 89
+ TG +++L+ + ++ F + L PIP +R F L I + + L +PAI G
Sbjct: 276 VSNTGPAVLLAMLATTMGFIAMLLTPIPMIRTFGLVAIIGVSCSYLTSLFGFPAIATLTG 335
Query: 90 SAAPKDQSLLGEDLMTS 106
++ G++LM S
Sbjct: 336 YVPKTEEKGAGQNLMRS 352
>gi|291402341|ref|XP_002717536.1| PREDICTED: dispatched A [Oryctolagus cuniculus]
Length = 1528
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 16 QFD--SVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFN 73
+FD + +E G+ L+ T LS+ ++S + AF++ + I A+R F + IL N
Sbjct: 584 KFDKPHAETSETVGVTLQHTALSMFVTSFTTAAAFYANYVSNITAIRCFGVYAGTAILVN 643
Query: 74 MFVLLLVYPAI 84
+++ PA+
Sbjct: 644 YVLMVTWLPAV 654
>gi|409080127|gb|EKM80488.1| hypothetical protein AGABI1DRAFT_73742 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1381
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 67/137 (48%), Gaps = 13/137 (9%)
Query: 29 VLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVYPAIECWV 88
L K G SI+LS++ +++AF +L+P+PA+R F L A +L N + + V+ +
Sbjct: 796 TLAKMGPSILLSTITETLAFALGALVPMPAVRNFALYAAGSVLINAILQVTVF------I 849
Query: 89 GSAAPKDQSLLGEDL-------MTSDEEEDEHTSSACKLKSYSEFSCRYLARQHARLITR 141
G+ + + + ++S E ++++ L + F RY A +T+
Sbjct: 850 GALLLDLKRVESSRVDCFPCIRLSSRIALPETSATSSGLGRIARFIRRYYAPFLMNSVTK 909
Query: 142 PGVKMIVVFGFIGVLIA 158
V +I V GF+ +I+
Sbjct: 910 ACVVIIFVGGFVASVIS 926
>gi|50293501|ref|XP_449162.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528475|emb|CAG62132.1| unnamed protein product [Candida glabrata]
Length = 1193
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 32/55 (58%)
Query: 30 LRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVYPAI 84
+ K SI S +C++ F + + +PA+R F L A+ +LFN+F+ L + AI
Sbjct: 677 ISKITPSIFSSMICQAGCFLIGATVDMPAVRNFALYSAVAVLFNVFLQLTAFTAI 731
>gi|242020342|ref|XP_002430614.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212515786|gb|EEB17876.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 838
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
MF+I + T + ++ E ++LR G+SI ++SV VAF SL +P+L
Sbjct: 286 MFVIISCWKHLTVAER--KLRHEEKIAVMLRHAGVSITVTSVTDLVAFLIGSLTILPSLH 343
Query: 61 VFNLQLAILILFNMFVL 77
F L A ILF MF+
Sbjct: 344 SFCLYTAAGILF-MFIF 359
>gi|405371150|ref|ZP_11026861.1| RND multidrug efflux transporter protein [Chondromyces apiculatus
DSM 436]
gi|397089135|gb|EJJ20071.1| RND multidrug efflux transporter protein [Myxococcus sp.
(contaminant ex DSM 436)]
Length = 1046
Score = 37.0 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 40/63 (63%), Gaps = 5/63 (7%)
Query: 22 LNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVY 81
+ E TG V+ G++++L+SV +AF + S+ I R F+L +A+ ILF+ F+ L +
Sbjct: 435 MREITGAVI---GITLVLTSVFIPMAFATGSVGTI--YRQFSLAMAVSILFSAFLALTLT 489
Query: 82 PAI 84
PA+
Sbjct: 490 PAL 492
>gi|281211245|gb|EFA85411.1| hypothetical protein PPL_02414 [Polysphondylium pallidum PN500]
Length = 1320
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 77/182 (42%), Gaps = 23/182 (12%)
Query: 1 MFLITKTF-----AKYTSKNQFDSVKLNECT-GIVLRKTGLSIILSSVCKSVAFFSASLI 54
+F++ TF + Y + + + L E T L K G S+ L+S+ +S+AF +L
Sbjct: 762 IFILVNTFESLHVSTYNASTRTTTRPLPEETLARALAKVGPSMALASLSESLAFLLGTLT 821
Query: 55 PIPALRVFNLQLAILILFNM------FVLLLVYPA-------IECWVGSAAPKDQSLLGE 101
+PA+ F+ ++ I F+ F LLV I+C P D L +
Sbjct: 822 KMPAVVAFSFYASVAIFFDFLIQISAFACLLVMDTRRTESRRIDCL--PCVPLDGELSDD 879
Query: 102 DLMTSDEEEDEHTSSACKL--KSYSEFSCRYLARQHARLITRPGVKMIVVFGFIGVLIAS 159
D D+ T+S + K F + +A + P K+ V F+G+L+
Sbjct: 880 DEPEKQTLLDQSTNSTYDVTYKKKDGFLKLIFKKYYAPFLIHPITKVCVCVFFVGLLLTG 939
Query: 160 VS 161
++
Sbjct: 940 IT 941
>gi|108762552|ref|YP_628375.1| HAE1 family efflux transporter [Myxococcus xanthus DK 1622]
gi|108466432|gb|ABF91617.1| efflux transporter, HAE1 family, inner membrane component
[Myxococcus xanthus DK 1622]
Length = 1046
Score = 37.0 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 40/63 (63%), Gaps = 5/63 (7%)
Query: 22 LNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVY 81
+ E TG V+ G++++L+SV +AF + S+ I R F+L +A+ ILF+ F+ L +
Sbjct: 435 MKEITGAVI---GITLVLTSVFIPMAFATGSVGTI--YRQFSLAMAVSILFSAFLALTLT 489
Query: 82 PAI 84
PA+
Sbjct: 490 PAL 492
>gi|347965977|ref|XP_321659.5| AGAP001468-PA [Anopheles gambiae str. PEST]
gi|333470267|gb|EAA00868.5| AGAP001468-PA [Anopheles gambiae str. PEST]
Length = 1000
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
MF++ + K N ++L E G++L+ G SI ++S+ VAF S+ IP+L+
Sbjct: 455 MFVMMACYRKVRKANP--DLQLAERMGLMLQHAGASITVTSLTDIVAFIVGSITVIPSLQ 512
Query: 61 VFNLQLAILILFNMFVLLLVY 81
F + A + F MFV ++ +
Sbjct: 513 SFCIYAAAGV-FMMFVFVITF 532
>gi|348506690|ref|XP_003440891.1| PREDICTED: protein dispatched homolog 1-like [Oreochromis
niloticus]
Length = 1588
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 16 QFDS--VKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFN 73
+FD +L E G+ L+ LS+ ++S + AF++ + I A+R F + IL N
Sbjct: 622 KFDKPHAELAETVGVTLQHAALSMFVTSFTTAAAFYANYVSNITAIRCFGVYAGTAILVN 681
Query: 74 MFVLLLVYPAI 84
+++ PA+
Sbjct: 682 YILMVTWLPAV 692
>gi|432092631|gb|ELK25166.1| Niemann-Pick C1-like protein 1 [Myotis davidii]
Length = 859
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 34/58 (58%)
Query: 27 GIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVYPAI 84
G L + G S++L SV ++V FF +L P+PA+R F L + ++ + + + + A+
Sbjct: 385 GRALGRVGPSMLLCSVSEAVCFFLGALTPMPAVRTFALTSGLALILDFLLQMSAFVAL 442
>gi|33589358|gb|AAQ22446.1| RE56428p [Drosophila melanogaster]
Length = 1287
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 15 NQFDSVKLNEC----TGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILI 70
+Q D K NE G +L K G SI+L+S+ +S FF L +PA+R F L + +
Sbjct: 711 HQRDQRKPNETLEQQVGRILGKVGPSILLTSLSESFCFFLGGLSDMPAVRAFALYAGVAL 770
Query: 71 LFN 73
+ +
Sbjct: 771 IID 773
>gi|407040575|gb|EKE40203.1| Niemann-Pick C1 protein, putative [Entamoeba nuttalli P19]
Length = 1339
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 34/58 (58%)
Query: 30 LRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVYPAIECW 87
L G S++L+S+ +S+AFF L +PA++ F+L + I + + + VY + C+
Sbjct: 788 LMHVGPSMMLASISESLAFFLGYLTSMPAVQSFSLYAGLAIFIDFILQITVYAVLLCY 845
>gi|167379322|ref|XP_001735092.1| niemann-Pick C1 protein precursor [Entamoeba dispar SAW760]
gi|165903055|gb|EDR28715.1| niemann-Pick C1 protein precursor, putative [Entamoeba dispar
SAW760]
Length = 1320
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 34/58 (58%)
Query: 30 LRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVYPAIECW 87
L G S++L+S+ +S+AFF L +PA++ F+L + I + + + VY + C+
Sbjct: 769 LMHVGPSMMLASISESLAFFLGYLTSMPAVQSFSLYAGLAIFIDFILQITVYAVLLCY 826
>gi|67466749|ref|XP_649516.1| Niemann-Pick C1 protein [Entamoeba histolytica HM-1:IMSS]
gi|56465980|gb|EAL44130.1| Niemann-Pick C1 protein, putative [Entamoeba histolytica HM-1:IMSS]
gi|449704661|gb|EMD44862.1| niemannPick C1 protein precursor, putative [Entamoeba histolytica
KU27]
Length = 1339
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 34/58 (58%)
Query: 30 LRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVYPAIECW 87
L G S++L+S+ +S+AFF L +PA++ F+L + I + + + VY + C+
Sbjct: 788 LMHVGPSMMLASISESLAFFLGYLTSMPAVQSFSLYAGLAIFIDFILQITVYAVLLCY 845
>gi|449475908|ref|XP_004154585.1| PREDICTED: niemann-Pick C1 protein-like [Cucumis sativus]
Length = 1182
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 39/71 (54%)
Query: 14 KNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFN 73
K Q + L E L + G SI L+S+ + +AF + +P+PA RVF++ A+ +L +
Sbjct: 697 KRQPYELSLEERISCALVEVGPSITLASLSEILAFAVGTFVPMPACRVFSMFAALAVLLD 756
Query: 74 MFVLLLVYPAI 84
+ L + A+
Sbjct: 757 FILQLSAFVAL 767
>gi|395511619|ref|XP_003760054.1| PREDICTED: LOW QUALITY PROTEIN: niemann-Pick C1 protein
[Sarcophilus harrisii]
Length = 1330
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 81/171 (47%), Gaps = 31/171 (18%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++ +TF + + L++ G +L + S+ LSS +++AFF +L +PA+R
Sbjct: 755 IFILVQTFQR---DERLQGETLDKQLGRILGEVAPSMFLSSFSETIAFFLGALSTMPAVR 811
Query: 61 VFNLQLAILILFNMFVLLLVYPAIECWVGSAAPKDQSLLGEDLMTSDEEE---------- 110
F+L A + +F F+L I C+V SLLG D+ ++ +
Sbjct: 812 TFSL-FAGMAVFIDFLL-----QITCFV--------SLLGLDIKRQEKNKLDILCCVRIA 857
Query: 111 DEHTSSACKLKSYSEFSCRYLARQHARLITRPGVKMIVVFGFIGVLIASVS 161
++ T S + + ++ + + + ++ IV+ F+G+L S++
Sbjct: 858 EDRTDS----QPSESYLFQFFKNAFSPFLLKDWMRPIVISVFVGILSFSIA 904
>gi|358060799|dbj|GAA93570.1| hypothetical protein E5Q_00214 [Mixia osmundae IAM 14324]
Length = 1453
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%)
Query: 29 VLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVY 81
L + G SI+LS+ C+ VAF SL+ +PA+R F + A + N + + V+
Sbjct: 881 ALSRMGPSILLSASCEVVAFALGSLVGMPAVRNFAIYAAGAVAINALLQITVF 933
>gi|206968699|ref|ZP_03229654.1| membrane protein YdfJ [Bacillus cereus AH1134]
gi|206735740|gb|EDZ52898.1| membrane protein YdfJ [Bacillus cereus AH1134]
Length = 706
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 11/94 (11%)
Query: 30 LRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVL-LLVYPAIECWV 88
+R +G + + + FF L+P P ++ + LA +LF+ FV+ L + PA+ +
Sbjct: 610 MRDSGKVVAAAGLIMIAVFFGFMLMPDPMVKAIGMSLAFGVLFDAFVVRLTIVPAVMTLM 669
Query: 89 GSAA---PK-------DQSLLGEDLMTSDEEEDE 112
G AA PK + + GE ++ E +D+
Sbjct: 670 GKAAWYMPKWLDKILPNIDVEGESILHKSESKDK 703
>gi|351706200|gb|EHB09119.1| Niemann-Pick C1-like protein 1 [Heterocephalus glaber]
Length = 1303
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 32/58 (55%)
Query: 27 GIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVYPAI 84
G L G S++L S+ +++ FF +L P+PA+R F L + + N + + + A+
Sbjct: 736 GRALGSVGPSMLLCSLSETICFFLGALTPMPAVRTFALTSGLAVFLNFLLQMTAFVAL 793
>gi|344293828|ref|XP_003418622.1| PREDICTED: niemann-Pick C1-like protein 1 [Loxodonta africana]
Length = 1343
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 32/58 (55%)
Query: 27 GIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVYPAI 84
G L G S++L S+ +++ FF L P+PA+R F L ++ + + +L + A+
Sbjct: 742 GRTLGHVGPSMLLCSISEAICFFLGMLTPMPAVRTFALTCGFAVVLDFLLQMLAFVAL 799
>gi|410915896|ref|XP_003971423.1| PREDICTED: protein dispatched homolog 1-like [Takifugu rubripes]
Length = 1597
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 16 QFDS--VKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFN 73
+FD +L+E G+ L+ LS+ ++S + AF++ + I A+R F + IL N
Sbjct: 642 KFDKPHAELSETVGVSLQHAALSMFVTSFTTAAAFYANYVSNITAIRCFGVYAGTAILVN 701
Query: 74 MFVLLLVYPAI 84
+++ PA+
Sbjct: 702 YILMVTWLPAV 712
>gi|301609239|ref|XP_002934172.1| PREDICTED: Niemann-Pick C1 protein-like [Xenopus (Silurana)
tropicalis]
Length = 1282
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 74/158 (46%), Gaps = 20/158 (12%)
Query: 10 KYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAIL 69
+Y + L++ G +L SI LS+ ++VAFF +L +PA+R F+L A +
Sbjct: 713 RYQRDERLHDETLDQQIGRILGDVAPSIFLSAFAETVAFFLGALSSMPAVRTFSL-FAGM 771
Query: 70 ILFNMFVLLLVYPAIECWVGSAAPKDQSLLGEDLMTSDEEEDE--HTSSACKLKSYSEFS 127
+F F+L I C++ SLL D+ ++ + CK ++
Sbjct: 772 AVFLDFLL-----QITCFI--------SLLSLDIRRQEKNRLDILCCVPGCKRNRGTDKP 818
Query: 128 CRYL----ARQHARLITRPGVKMIVVFGFIGVLIASVS 161
+L + +A ++ + ++ IVV F+G+L S++
Sbjct: 819 KSWLFLFFKKLYAPVLMKDWIRPIVVSVFVGILSFSIA 856
>gi|338723834|ref|XP_001495852.3| PREDICTED: LOW QUALITY PROTEIN: niemann-Pick C1-like protein 1-like
[Equus caballus]
Length = 1331
Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 63/139 (45%), Gaps = 27/139 (19%)
Query: 27 GIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQ------LAILILFNMFVLLLV 80
G L + G S++L S+ +++ FF +L +PA+R F L L L+ + FV LL
Sbjct: 738 GRALGRVGPSMLLCSLSEAICFFLGALTSMPAVRTFALTSGFAVILDFLLQMSAFVALL- 796
Query: 81 YPAIECWVGSAAPKDQSLLGEDL---MTSDEEEDEHTSSACKLKSYSEFSCRYLARQHAR 137
+++C + Q L D ++ E S L+S+ +F +A
Sbjct: 797 --SLDC-------RRQEALRLDFCCCCSAGELPPPAQSEGLLLRSFRKF--------YAP 839
Query: 138 LITRPGVKMIVVFGFIGVL 156
L+ P + +V+ GF+ +
Sbjct: 840 LLLHPVTRAVVLLGFLALF 858
>gi|328859706|gb|EGG08814.1| hypothetical protein MELLADRAFT_84368 [Melampsora larici-populina
98AG31]
Length = 1470
Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 33/55 (60%)
Query: 27 GIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVY 81
G + + G S++LS+ C++VAF +++ +PA+R F + A + N + + V+
Sbjct: 892 GKAISRVGPSVLLSASCETVAFALGAIVGMPAVRNFAIYAAGAVAINTILQMTVF 946
>gi|359323387|ref|XP_003640083.1| PREDICTED: protein dispatched homolog 2-like [Canis lupus
familiaris]
Length = 1403
Score = 36.2 bits (82), Expect = 4.2, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 38/71 (53%)
Query: 13 SKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILF 72
SK+Q S L + G + G +++S + + AF+++ L +PA+R F L + +L
Sbjct: 571 SKSQLPSGGLAQRVGRTMHHFGYLLLVSGLTTAAAFYASYLSRLPAVRCFALYMGTAVLA 630
Query: 73 NMFVLLLVYPA 83
++ + L PA
Sbjct: 631 HLALTLAWLPA 641
>gi|307130251|ref|YP_003882267.1| RND multidrug efflux transporter; Acriflavin resistance protein
[Dickeya dadantii 3937]
gi|306527780|gb|ADM97710.1| RND multidrug efflux transporter; Acriflavin resistance protein
[Dickeya dadantii 3937]
Length = 1044
Score = 36.2 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 5/63 (7%)
Query: 22 LNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVY 81
+ E TG ++ G++++LS+V +AF S S+ I R F L +A+ ILF+ F+ L +
Sbjct: 435 MKEITGAIV---GITLVLSAVFIPMAFASGSVGVI--YRQFTLSMAVSILFSAFLALTLT 489
Query: 82 PAI 84
PA+
Sbjct: 490 PAL 492
>gi|313230647|emb|CBY18863.1| unnamed protein product [Oikopleura dioica]
Length = 1285
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 35/56 (62%)
Query: 29 VLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVYPAI 84
+L + G S+ LSS +++AFF +L +PA+R F+L +LF+ + + V+ AI
Sbjct: 769 ILGEVGPSMALSSGSETIAFFIGALSTMPAVRSFSLFAGAAVLFDFCLQVTVFIAI 824
>gi|422909864|ref|ZP_16944506.1| RND transporter, hydrophobe/amphiphile efflux-1 family protein
[Vibrio cholerae HE-09]
gi|341634120|gb|EGS58887.1| RND transporter, hydrophobe/amphiphile efflux-1 family protein
[Vibrio cholerae HE-09]
Length = 969
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 75/144 (52%), Gaps = 20/144 (13%)
Query: 10 KYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAIL 69
K S + S + E TG ++ G++++L++V +AF S S+ I + F L +A+
Sbjct: 348 KGLSPKEATSKAMKEITGAII---GITLVLTAVFIPMAFASDSVGAI--YKQFTLSMAVS 402
Query: 70 ILFNMFVLLLVYPAIECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACKLKSYSEFSCR 129
ILF+ F+ L + PA+ C + L + + T+ E+ + + +S + R
Sbjct: 403 ILFSAFLALTLTPAL-C----------ATLLKPVNTNHHEQTRF--AKWFNRGFSRMNNR 449
Query: 130 YLARQHARLITRPGVKMIVVFGFI 153
Y ++ +A L+ R G +M++VF F+
Sbjct: 450 YESQVNA-LVNRKG-RMMLVFVFL 471
>gi|28972826|dbj|BAC65829.1| mKIAA1742 protein [Mus musculus]
Length = 968
Score = 36.2 bits (82), Expect = 4.5, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 36/71 (50%)
Query: 13 SKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILF 72
S+ Q S + G + G +++S + S AF+ + L +PA+R F L + +L
Sbjct: 147 SRGQVPSGGMPHRVGRTMHHFGYLLLVSGLTTSAAFYGSYLSRLPAVRCFALFMGTAVLV 206
Query: 73 NMFVLLLVYPA 83
+M + LL PA
Sbjct: 207 HMGLTLLWLPA 217
>gi|313240164|emb|CBY32514.1| unnamed protein product [Oikopleura dioica]
Length = 884
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 35/56 (62%)
Query: 29 VLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVYPAI 84
+L + G S+ LSS +++AFF +L +PA+R F+L +LF+ + + V+ AI
Sbjct: 677 ILGEVGPSMALSSGSETIAFFIGALSTMPAVRSFSLFAGAAVLFDFCLQVTVFIAI 732
>gi|408421758|ref|YP_006763172.1| hypothetical protein TOL2_C43120 [Desulfobacula toluolica Tol2]
gi|405108971|emb|CCK82468.1| conserved uncharacterized membrane protein [Desulfobacula toluolica
Tol2]
Length = 850
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 29 VLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFN-MFVLLLVYPAIECW 87
V++K+GL+ +L+S+ +V FS L+P+ + F + A+ +LF +F +LL+ ++ W
Sbjct: 380 VMKKSGLACMLTSLTTAVGLFSLVLVPMKPISNFGVFAAVAVLFAFVFTVLLLPLMLDIW 439
>gi|390368166|ref|XP_790971.3| PREDICTED: niemann-Pick C1 protein-like [Strongylocentrotus
purpuratus]
Length = 813
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 35/62 (56%)
Query: 23 NECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVYP 82
E G VL K S++L + +S++FF +L +PA+R+F L + +L N + + +
Sbjct: 192 EEQIGRVLGKVAPSMLLCGLSESISFFLGALTEMPAVRIFALYSGMSVLINFILQITAFV 251
Query: 83 AI 84
A+
Sbjct: 252 AL 253
>gi|321461115|gb|EFX72150.1| hypothetical protein DAPPUDRAFT_10357 [Daphnia pulex]
Length = 1056
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 35/66 (53%)
Query: 18 DSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVL 77
D L + L GLS++++S+ + AFFS+ + P+ A+R F+L + + + +
Sbjct: 516 DGTTLAKLVMDTLSHAGLSMLVTSLTTAAAFFSSFICPVTAIRCFSLFAGLTVTIHFLFM 575
Query: 78 LLVYPA 83
L PA
Sbjct: 576 LSWLPA 581
>gi|307110227|gb|EFN58463.1| hypothetical protein CHLNCDRAFT_6284, partial [Chlorella
variabilis]
Length = 1213
Score = 36.2 bits (82), Expect = 5.0, Method: Composition-based stats.
Identities = 41/155 (26%), Positives = 64/155 (41%), Gaps = 27/155 (17%)
Query: 27 GIVLRKTGLSIILS------------SVCKSVAFFSASLIPIPALRVFNLQLAILILFN- 73
G+ L G SI L+ + C+ VAF L +PALR F++ ++ +L +
Sbjct: 738 GLALAAVGPSITLAGQWAGRAGGLGFASCEVVAFALGGLTSMPALRNFSICASLAVLLDY 797
Query: 74 -----MFVLLLVYPAIECWVG--SAAPKDQSLLGEDLMTSDEEEDEHTSSACKLKSYSEF 126
FV LL A G P + G + S + + + L+SY
Sbjct: 798 LLQVTAFVALLALDARRLEQGRYDCMPWVRWGRGGQALWSWRYDTRYVGVSSALRSY--- 854
Query: 127 SCRYLARQHARLITRPGVKMIVVFGFIGVLIASVS 161
+ R HA L+ RP VK V+ F G+ + S +
Sbjct: 855 ----MRRVHAPLLARPAVKAAVLALFGGMFLLSCA 885
>gi|423017315|ref|ZP_17008036.1| hydrophobe/amphiphile efflux-3 transporter [Achromobacter
xylosoxidans AXX-A]
gi|338779593|gb|EGP44030.1| hydrophobe/amphiphile efflux-3 transporter [Achromobacter
xylosoxidans AXX-A]
Length = 1047
Score = 36.2 bits (82), Expect = 5.0, Method: Composition-based stats.
Identities = 32/126 (25%), Positives = 56/126 (44%), Gaps = 21/126 (16%)
Query: 34 GLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVYPAIECWVGSAAP 93
G++++L++V +AF S S+ I R F+L LA+ ILF+ F+ L PA+ P
Sbjct: 446 GITMVLAAVFLPLAFMSGSVGVI--YRQFSLSLAVSILFSGFLALTFTPALCATFLKPIP 503
Query: 94 KDQSLLGEDLMTSDEEEDEHTSSACKLKSYSEFSCRYLAR---QHARLITRPGVKMIVVF 150
K H +++ F R +R ++RL+ R G M++
Sbjct: 504 KGH----------------HEEKRGFFGAFNRFFTRLTSRFESLNSRLVRRTGRYMVIYA 547
Query: 151 GFIGVL 156
+ +L
Sbjct: 548 AIVAML 553
>gi|190339972|gb|AAI63557.1| Dispatched homolog 1 (Drosophila) [Danio rerio]
Length = 1464
Score = 36.2 bits (82), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 16 QFD--SVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFN 73
+FD +++L+E I L+ LS+ ++S + AF++ + I A+R F + IL N
Sbjct: 567 KFDKPNLELSETVSITLQHAALSMFVTSFTTAAAFYANYVSNITAIRCFGVYAGTAILVN 626
Query: 74 MFVLLLVYPAI 84
+++ PA+
Sbjct: 627 YILMVTWLPAV 637
>gi|402873960|ref|XP_003900816.1| PREDICTED: protein dispatched homolog 2 [Papio anubis]
Length = 1401
Score = 35.8 bits (81), Expect = 5.5, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 38/71 (53%)
Query: 13 SKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILF 72
SK+Q S L + G + G +++S + S AF+++ L +PA+R L + +L
Sbjct: 569 SKSQLPSGGLAQRVGRTMHHFGYLLLVSGLTTSAAFYASYLSRLPAVRCLALFMGTAVLV 628
Query: 73 NMFVLLLVYPA 83
++ + L+ PA
Sbjct: 629 HLALTLVWLPA 639
>gi|397512581|ref|XP_003826619.1| PREDICTED: LOW QUALITY PROTEIN: protein dispatched homolog 2 [Pan
paniscus]
Length = 1401
Score = 35.8 bits (81), Expect = 5.7, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 38/71 (53%)
Query: 13 SKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILF 72
SK+Q S L + G + G +++S + S AF+++ L +PA+R L + +L
Sbjct: 569 SKSQLPSGGLAQRVGRTMHHFGYLLLVSGLTTSAAFYASYLSRLPAVRCLALFMGTAVLV 628
Query: 73 NMFVLLLVYPA 83
++ + L+ PA
Sbjct: 629 HLALTLVWLPA 639
>gi|297296154|ref|XP_002808489.1| PREDICTED: LOW QUALITY PROTEIN: protein dispatched homolog 2-like
[Macaca mulatta]
Length = 1206
Score = 35.8 bits (81), Expect = 5.7, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 38/71 (53%)
Query: 13 SKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILF 72
SK+Q S L + G + G +++S + S AF+++ L +PA+R L + +L
Sbjct: 569 SKSQLPSGGLAQRVGRTMHHFGYLLLVSGLTTSAAFYASYLSRLPAVRCLALFMGTAVLV 628
Query: 73 NMFVLLLVYPA 83
++ + L+ PA
Sbjct: 629 HLALTLVWLPA 639
>gi|297696317|ref|XP_002825348.1| PREDICTED: LOW QUALITY PROTEIN: protein dispatched homolog 2 [Pongo
abelii]
Length = 1402
Score = 35.8 bits (81), Expect = 5.7, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 38/71 (53%)
Query: 13 SKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILF 72
SK+Q S L + G + G +++S + S AF+++ L +PA+R L + +L
Sbjct: 570 SKSQLPSGGLAQRVGRTMHHFGYLLLVSGLTTSAAFYASYLSRLPAVRCLALFMGTAVLV 629
Query: 73 NMFVLLLVYPA 83
++ + L+ PA
Sbjct: 630 HLALTLVWLPA 640
>gi|270015400|gb|EFA11848.1| hypothetical protein TcasGA2_TC005088 [Tribolium castaneum]
Length = 1366
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 27 GIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVY 81
G L + G S++L+SV +S FF SL +PA++ F L + +LF+ + + +
Sbjct: 823 GRTLGQVGPSMLLTSVSESCCFFLGSLSDMPAVKAFALYAGMALLFDFLLQITCF 877
>gi|25121980|ref|NP_277045.1| protein dispatched homolog 2 [Homo sapiens]
gi|160380692|sp|A7MBM2.2|DISP2_HUMAN RecName: Full=Protein dispatched homolog 2
Length = 1401
Score = 35.8 bits (81), Expect = 5.7, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 38/71 (53%)
Query: 13 SKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILF 72
SK+Q S L + G + G +++S + S AF+++ L +PA+R L + +L
Sbjct: 569 SKSQLPSGGLAQRVGRTMHHFGYLLLVSGLTTSAAFYASYLSRLPAVRCLALFMGTAVLV 628
Query: 73 NMFVLLLVYPA 83
++ + L+ PA
Sbjct: 629 HLALTLVWLPA 639
>gi|20521982|dbj|BAB21833.2| KIAA1742 protein [Homo sapiens]
Length = 1301
Score = 35.8 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 38/71 (53%)
Query: 13 SKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILF 72
SK+Q S L + G + G +++S + S AF+++ L +PA+R L + +L
Sbjct: 469 SKSQLPSGGLAQRVGRTMHHFGYLLLVSGLTTSAAFYASYLSRLPAVRCLALFMGTAVLV 528
Query: 73 NMFVLLLVYPA 83
++ + L+ PA
Sbjct: 529 HLALTLVWLPA 539
>gi|395837695|ref|XP_003791765.1| PREDICTED: protein dispatched homolog 2 [Otolemur garnettii]
Length = 1397
Score = 35.8 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 37/71 (52%)
Query: 13 SKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILF 72
SK Q S L G + G +++S + SVAF+++ L +PA+R F + + +L
Sbjct: 565 SKRQLPSGGLALRVGRTMHHFGYLLLVSGLTTSVAFYASYLSRLPAVRCFAVYMGTAVLV 624
Query: 73 NMFVLLLVYPA 83
++ + L PA
Sbjct: 625 HLALTLAWLPA 635
>gi|119612814|gb|EAW92408.1| dispatched homolog 2 (Drosophila), isoform CRA_b [Homo sapiens]
Length = 1430
Score = 35.8 bits (81), Expect = 5.8, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 38/71 (53%)
Query: 13 SKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILF 72
SK+Q S L + G + G +++S + S AF+++ L +PA+R L + +L
Sbjct: 598 SKSQLPSGGLAQRVGRTMHHFGYLLLVSGLTTSAAFYASYLSRLPAVRCLALFMGTAVLV 657
Query: 73 NMFVLLLVYPA 83
++ + L+ PA
Sbjct: 658 HLALTLVWLPA 668
>gi|189241956|ref|XP_967619.2| PREDICTED: similar to niemann-pick C1 [Tribolium castaneum]
Length = 1306
Score = 35.8 bits (81), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%)
Query: 27 GIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFN 73
G L + G S++L+SV +S FF SL +PA++ F L + +LF+
Sbjct: 749 GRTLGQVGPSMLLTSVSESCCFFLGSLSDMPAVKAFALYAGMALLFD 795
>gi|332843603|ref|XP_523050.3| PREDICTED: protein dispatched homolog 2 [Pan troglodytes]
Length = 1366
Score = 35.8 bits (81), Expect = 6.0, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 38/71 (53%)
Query: 13 SKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILF 72
SK+Q S L + G + G +++S + S AF+++ L +PA+R L + +L
Sbjct: 534 SKSQLPSGGLAQRVGRTMHHFGYLLLVSGLTTSAAFYASYLSRLPAVRCLALFMGTAVLV 593
Query: 73 NMFVLLLVYPA 83
++ + L+ PA
Sbjct: 594 HLALTLVWLPA 604
>gi|260830212|ref|XP_002610055.1| hypothetical protein BRAFLDRAFT_125689 [Branchiostoma floridae]
gi|229295418|gb|EEN66065.1| hypothetical protein BRAFLDRAFT_125689 [Branchiostoma floridae]
Length = 918
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 61/150 (40%), Gaps = 15/150 (10%)
Query: 22 LNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVY 81
+ E G + +SI +++V +AF ++ PA+RVF + + +LF+ F + +
Sbjct: 352 VEERMGETYAEAAVSITITTVTDGLAFGIGAITVFPAIRVFCIYTGVAVLFDYFFQITFF 411
Query: 82 PAIECWVGSAAPKD-QSLLGEDLMTSDEEEDEH--------TSSACKLKSYSEFSCR--- 129
A +VG + + + T E ED ++ + EFS
Sbjct: 412 GACMVYVGRREKGNRHAATCMPVATPHEVEDRSGCYRLFCTGNTMAGVNERGEFSGSDHA 471
Query: 130 ---YLARQHARLITRPGVKMIVVFGFIGVL 156
+ IT+ VK++V+ F G L
Sbjct: 472 VMTFFKDYFGHFITKTWVKVVVMLVFAGYL 501
>gi|195578067|ref|XP_002078887.1| GD22294 [Drosophila simulans]
gi|194190896|gb|EDX04472.1| GD22294 [Drosophila simulans]
Length = 1251
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 15 NQFDSVKLNEC----TGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILI 70
+Q D K NE G +L K G S++L+S+ +S FF L +PA+R F L + +
Sbjct: 711 HQRDQRKPNETLEQQVGRILGKVGPSMLLTSLSESFCFFLGGLSDMPAVRAFALYAGVAL 770
Query: 71 LFNMFV 76
+ + +
Sbjct: 771 IIDFLL 776
>gi|119612813|gb|EAW92407.1| dispatched homolog 2 (Drosophila), isoform CRA_a [Homo sapiens]
Length = 1137
Score = 35.8 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 38/71 (53%)
Query: 13 SKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILF 72
SK+Q S L + G + G +++S + S AF+++ L +PA+R L + +L
Sbjct: 305 SKSQLPSGGLAQRVGRTMHHFGYLLLVSGLTTSAAFYASYLSRLPAVRCLALFMGTAVLV 364
Query: 73 NMFVLLLVYPA 83
++ + L+ PA
Sbjct: 365 HLALTLVWLPA 375
>gi|167522747|ref|XP_001745711.1| patched like [Monosiga brevicollis MX1]
gi|163776060|gb|EDQ89682.1| patched like [Monosiga brevicollis MX1]
Length = 1466
Score = 35.8 bits (81), Expect = 6.2, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 39/87 (44%), Gaps = 4/87 (4%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
MF++ +A+ + + + + + G SI +++ VAF AS + +
Sbjct: 937 MFVLAHAYAREVRQ----TASVGAVVARAMGEAGPSIAFTTLINFVAFMVASATRVEVVE 992
Query: 61 VFNLQLAILILFNMFVLLLVYPAIECW 87
VF QL I ++FN L ++ + W
Sbjct: 993 VFCYQLVIAVIFNFIALFTLFLPVLVW 1019
>gi|298711283|emb|CBJ26528.1| novel protein [Ectocarpus siliculosus]
Length = 934
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 36/66 (54%)
Query: 19 SVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLL 78
S+ + E + +++ G+S+ +S+ AF SL +PA+ F L A ILF+ F+ +
Sbjct: 378 SLAVEERVALGVKRCGVSVTYTSLTNFFAFLLGSLTSLPAVEYFCLYAATAILFDFFLQM 437
Query: 79 LVYPAI 84
+ A+
Sbjct: 438 TAFVAL 443
>gi|344294162|ref|XP_003418788.1| PREDICTED: protein dispatched homolog 2-like [Loxodonta africana]
Length = 1558
Score = 35.8 bits (81), Expect = 6.6, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Query: 13 SKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILF 72
SK+Q S L + G + G +++S + AF+++ L +PA+R F L + +L
Sbjct: 722 SKSQLPSGGLAQRVGRTMHHFGYLLLVSGLTTGAAFYASYLSRLPAVRCFALYMGTAVLA 781
Query: 73 NMFVLLLVYPAIECWVGSAA 92
++ + L W+ SAA
Sbjct: 782 HLVLTL-------AWLPSAA 794
>gi|347971322|ref|XP_313021.5| AGAP004140-PA [Anopheles gambiae str. PEST]
gi|333468616|gb|EAA08570.5| AGAP004140-PA [Anopheles gambiae str. PEST]
Length = 1222
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 37/66 (56%)
Query: 18 DSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVL 77
+S L E G LR LS++++S+ + AF+++ + I A+R F + ++ N F++
Sbjct: 536 ESDTLVEIMGSTLRHAALSMLVTSLTTAAAFYASYVSSITAVRCFGIFSGTAVMANYFLM 595
Query: 78 LLVYPA 83
+ PA
Sbjct: 596 VTWLPA 601
>gi|426378646|ref|XP_004056024.1| PREDICTED: protein dispatched homolog 2 [Gorilla gorilla gorilla]
Length = 1401
Score = 35.8 bits (81), Expect = 7.0, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 38/71 (53%)
Query: 13 SKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILF 72
SK+Q S L + G + G +++S + S AF+++ L +PA+R L + +L
Sbjct: 569 SKSQLPSGGLAQRVGRTMHHFGYLLLVSGLTMSAAFYASYLSRLPAVRCLALFMGTAVLV 628
Query: 73 NMFVLLLVYPA 83
++ + L+ PA
Sbjct: 629 HLALTLVWLPA 639
>gi|311245002|ref|XP_001924639.2| PREDICTED: protein dispatched homolog 2-like [Sus scrofa]
Length = 1438
Score = 35.8 bits (81), Expect = 7.0, Method: Composition-based stats.
Identities = 19/71 (26%), Positives = 37/71 (52%)
Query: 13 SKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILF 72
SKNQ + L + G + G +++S + AF+++ L +PA+R F L + +L
Sbjct: 604 SKNQLPAGGLAQRVGRTMHHFGYLLLVSGLTTGAAFYASYLSRLPAVRCFALYMGTAVLA 663
Query: 73 NMFVLLLVYPA 83
++ + L P+
Sbjct: 664 HLALTLAWLPS 674
>gi|443689846|gb|ELT92137.1| hypothetical protein CAPTEDRAFT_164279 [Capitella teleta]
Length = 1287
Score = 35.4 bits (80), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++ +T Y + + + L + V+ K G S++L+S +++AFF +L +PA+R
Sbjct: 639 IFILVQT---YQRSERPEGLPLEQQIASVVGKVGPSMMLTSFSETLAFFLGALTAMPAVR 695
Query: 61 VFNLQLAILILFN 73
F+L A I +
Sbjct: 696 AFSLYAAGAIFID 708
>gi|126723429|ref|NP_001075697.1| Niemann-Pick C1-like protein 1 precursor [Oryctolagus cuniculus]
gi|117188115|gb|ABK32537.1| Niemann-Pick C1-like 1 protein [Oryctolagus cuniculus]
Length = 1325
Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Query: 27 GIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNL------QLAILILFNMFVLLL 79
G L + S++L S+ +++ FF +L P+PA+R F L QL L+ FV LL
Sbjct: 736 GRALGRVAPSMLLCSLSETICFFLGALTPMPAVRTFALTSGLAVQLDFLLQMTAFVALL 794
>gi|324507650|gb|ADY43241.1| Patched-related protein 9 [Ascaris suum]
Length = 695
Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 76/160 (47%), Gaps = 11/160 (6%)
Query: 2 FLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRV 61
FL+T T+ + + E +V K G ++ ++S + F + P+P +R+
Sbjct: 168 FLLTNTWMRQRDIALQQNYSPAERLQLVFEKVGAAVAVTSFTNVLGFALGCIAPVPEIRL 227
Query: 62 FNLQLAILILFNMFVLLLVYPAIECWVGSAAPKDQSLLGE-DLMTSDEEEDEHTSSACKL 120
F +++ + ++ L +Y + + K +S+ G+ +L+T +E+++ SS K+
Sbjct: 228 FCASVSLSMFMDLVFQLTLYSPLHVLLD----KSRSVEGKYELVTKNEKQE--LSSGQKV 281
Query: 121 KSYSEFSCRYLARQHARLITRPGVKMIVVFGFIGVLIASV 160
+++ +Y +A + +MI+V IG L S+
Sbjct: 282 RNFFATIVQY----YAEFVASLWAEMILVGVLIGYLYISI 317
>gi|195339683|ref|XP_002036446.1| GM11941 [Drosophila sechellia]
gi|194130326|gb|EDW52369.1| GM11941 [Drosophila sechellia]
Length = 1287
Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 15 NQFDSVKLNEC----TGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILI 70
+Q D K NE G +L K G S++L+S+ +S FF L +PA+R F L + +
Sbjct: 711 HQRDQRKPNETLEQQVGRILGKVGPSMLLTSLSESFCFFLGGLSDMPAVRAFALYAGVAL 770
Query: 71 LFN 73
+ +
Sbjct: 771 IID 773
>gi|5921280|emb|CAB56505.1| NPC1 protein [Drosophila melanogaster]
Length = 1287
Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 15 NQFDSVKLNEC----TGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILI 70
+Q D K NE G +L K G S++L+S+ +S FF L +PA+R F L + +
Sbjct: 711 HQRDQRKPNETLEQQVGRILGKVGPSMLLTSLSESFCFFLGGLSDMPAVRAFALYAGVAL 770
Query: 71 LFN 73
+ +
Sbjct: 771 IID 773
>gi|42562545|ref|NP_174975.2| Niemann-Pick C1 protein [Arabidopsis thaliana]
gi|332193798|gb|AEE31919.1| Niemann-Pick C1 protein [Arabidopsis thaliana]
Length = 1272
Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 70/158 (44%), Gaps = 23/158 (14%)
Query: 14 KNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFN 73
K Q + L L + G SI L+S+ + +AF + I +PA+RVF++ A+ +L +
Sbjct: 686 KRQEQELPLERRISNALMEVGPSITLASLAEILAFAVGAFIKMPAVRVFSMFAALAVLLD 745
Query: 74 MFVLLLVYPAIECWVGSAAPKDQSLLGEDLMTSDEEED------EHTSSACKLKSYSEFS 127
+ + + A+ ++ + T D+ D SS K +
Sbjct: 746 FLLQITAFVAL-------------IVFDFRRTEDKRVDCFPCIKTSKSSISAEKGVGQRK 792
Query: 128 C----RYLARQHARLITRPGVKMIVVFGFIGVLIASVS 161
RY+ HA +++ VK++V+ F G+ +A ++
Sbjct: 793 AGLLTRYMKEVHAPVLSHWIVKIVVIAFFFGLAMAGIA 830
>gi|24583258|ref|NP_609357.2| Niemann-Pick type C-1a, isoform A [Drosophila melanogaster]
gi|320544872|ref|NP_001188769.1| Niemann-Pick type C-1a, isoform B [Drosophila melanogaster]
gi|320544874|ref|NP_001188770.1| Niemann-Pick type C-1a, isoform C [Drosophila melanogaster]
gi|320544876|ref|NP_001188771.1| Niemann-Pick type C-1a, isoform D [Drosophila melanogaster]
gi|10728700|gb|AAF52874.2| Niemann-Pick type C-1a, isoform A [Drosophila melanogaster]
gi|318068403|gb|ADV37019.1| Niemann-Pick type C-1a, isoform B [Drosophila melanogaster]
gi|318068404|gb|ADV37020.1| Niemann-Pick type C-1a, isoform C [Drosophila melanogaster]
gi|318068405|gb|ADV37021.1| Niemann-Pick type C-1a, isoform D [Drosophila melanogaster]
Length = 1287
Score = 35.4 bits (80), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 15 NQFDSVKLNEC----TGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILI 70
+Q D K NE G +L K G S++L+S+ +S FF L +PA+R F L + +
Sbjct: 711 HQRDQRKPNETLEQQVGRILGKVGPSMLLTSLSESFCFFLGGLSDMPAVRAFALYAGVAL 770
Query: 71 LFN 73
+ +
Sbjct: 771 IID 773
>gi|356501763|ref|XP_003519693.1| PREDICTED: niemann-Pick C1 protein-like [Glycine max]
Length = 1268
Score = 35.4 bits (80), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 70/150 (46%), Gaps = 7/150 (4%)
Query: 14 KNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFN 73
K Q + + E + + G SI L+S+ + +AF S + +PA RVF++ A+ +L +
Sbjct: 707 KRQPSGLPVEEQISNAMGEVGPSITLASLSEILAFAVGSFVSMPACRVFSMIAALAVLLD 766
Query: 74 MFVLLLVYPAIEC--WVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACKLKSYSEFSCRYL 131
+ + + A+ ++ + + L E++E +L+ + RY+
Sbjct: 767 FLLQITAFVALVTLDFMRAKDNRIDCFPCVKLNPPSAEQNE----GIRLERDGLLT-RYM 821
Query: 132 ARQHARLITRPGVKMIVVFGFIGVLIASVS 161
HA + GVK++V+ F +AS++
Sbjct: 822 KEVHAPFLGLWGVKILVIAVFAAFTLASIA 851
>gi|324504129|gb|ADY41784.1| Patched domain-containing protein 3 [Ascaris suum]
Length = 898
Score = 35.4 bits (80), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 29/142 (20%), Positives = 64/142 (45%), Gaps = 15/142 (10%)
Query: 2 FLITKTFAKYTSKNQFDSVK--LNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPAL 59
FL+ + + ++ + D ++ + E VL + G SI ++S+ +VAF +P P +
Sbjct: 352 FLMINAWNRICAERRRDGIREEMRERMADVLIEVGPSITITSLTNTVAFGMGLFMPTPEI 411
Query: 60 RVFNLQLAILILFNMFVLLLVYPAIECWVGSAAPKDQSLLGEDLMTSD--EEEDEHTSSA 117
R+ + A+ I + + +Y AI S+ G M+ + E+ + +
Sbjct: 412 RLLCIATAVAIFLDYIYTITMYAAI-----------MSIGGRFEMSKEICEKVPRNDNEP 460
Query: 118 CKLKSYSEFSCRYLARQHARLI 139
K +++ + C +L+ L+
Sbjct: 461 TKAQAFLDNYCNWLSSWFTSLV 482
>gi|56459284|ref|YP_154565.1| RND superfamily exporter [Idiomarina loihiensis L2TR]
gi|56178294|gb|AAV81016.1| Predicted exporter, RND superfamily [Idiomarina loihiensis L2TR]
Length = 838
Score = 35.4 bits (80), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 30/58 (51%)
Query: 29 VLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVYPAIEC 86
VLR ++ +S+ S+ F+S L PIP ++VF + IL + +L PA C
Sbjct: 307 VLRHLFTPMLFTSITSSIGFYSLMLTPIPPVQVFGAFVGSGILLAFLITVLFVPAYIC 364
>gi|347527135|ref|YP_004833882.1| efflux pump inner membrane protein [Sphingobium sp. SYK-6]
gi|345135816|dbj|BAK65425.1| efflux pump inner membrane protein [Sphingobium sp. SYK-6]
Length = 1043
Score = 35.4 bits (80), Expect = 7.8, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 5/63 (7%)
Query: 22 LNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVY 81
+ E TG ++ G++++L++V +AF S S+ I R F + +A+ ILF+ F+ L +
Sbjct: 435 MTEITGAII---GITLVLTAVFIPMAFSSGSVGAI--YRQFTISMAVSILFSAFLALTLT 489
Query: 82 PAI 84
PA+
Sbjct: 490 PAL 492
>gi|403215510|emb|CCK70009.1| hypothetical protein KNAG_0D02600 [Kazachstania naganishii CBS
8797]
Length = 1191
Score = 35.4 bits (80), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 36 SIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVYPAI 84
SI+LS +C++ F AS + +PA+R F L A +LFN+ + Y +I
Sbjct: 669 SILLSFICQAGCFLLASFVSMPAVRNFALYSATAVLFNVILQSTAYVSI 717
>gi|402583265|gb|EJW77209.1| hypothetical protein WUBG_11883 [Wuchereria bancrofti]
Length = 274
Score = 35.4 bits (80), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 36 SIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVYPAI 84
S++LSS+ + + FF +L +PA++VF+L A+ I FN F+ + + AI
Sbjct: 135 SMLLSSLSECLCFFVGALSSMPAVKVFSLYAALAIFFNFFLQITCFLAI 183
>gi|156229757|gb|AAI51834.1| DISP2 protein [Homo sapiens]
Length = 665
Score = 35.4 bits (80), Expect = 8.1, Method: Composition-based stats.
Identities = 20/71 (28%), Positives = 38/71 (53%)
Query: 13 SKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILF 72
SK+Q S L + G + G +++S + S AF+++ L +PA+R L + +L
Sbjct: 569 SKSQLPSGGLAQRVGRTMHHFGYLLLVSGLTTSAAFYASYLSRLPAVRCLALFMGTAVLV 628
Query: 73 NMFVLLLVYPA 83
++ + L+ PA
Sbjct: 629 HLALTLVWLPA 639
>gi|260791706|ref|XP_002590869.1| hypothetical protein BRAFLDRAFT_239964 [Branchiostoma floridae]
gi|229276067|gb|EEN46880.1| hypothetical protein BRAFLDRAFT_239964 [Branchiostoma floridae]
Length = 843
Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 32/158 (20%), Positives = 72/158 (45%), Gaps = 12/158 (7%)
Query: 9 AKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAI 68
A + N +DSV+ + + + G+SI ++++ ++AF ++ P +RVF + I
Sbjct: 338 AAWRKTNPWDSVQ--DRSANTYAEAGVSITITTLTNALAFAVGAITSFPGVRVFCMYSGI 395
Query: 69 LILFNMFVLLLVYPAIECWVGSAAPKDQSLL---GEDLMTSDEEEDEHTSSACK------ 119
I+F L + A + G +++ L + + D++ S C+
Sbjct: 396 AIVFAYLFQLNFFGACMIYDGYREKQNRHFLTCMTVPIPSKDDQSGCCQQSCCRGDAKAG 455
Query: 120 LKSYSEFSCR-YLARQHARLITRPGVKMIVVFGFIGVL 156
+K +++ + + + +T VK++V+ F+G L
Sbjct: 456 VKDHNDHLIMLFFKKYYGPFMTNVWVKVVVMIMFVGYL 493
>gi|424660513|ref|ZP_18097760.1| RND transporter, hydrophobe/amphiphile efflux-1 family protein
[Vibrio cholerae HE-16]
gi|408050422|gb|EKG85585.1| RND transporter, hydrophobe/amphiphile efflux-1 family protein
[Vibrio cholerae HE-16]
Length = 988
Score = 35.4 bits (80), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 72/135 (53%), Gaps = 20/135 (14%)
Query: 19 SVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLL 78
S + E TG ++ G++++L++V +AF S S+ I + F L +A+ ILF+ F+ L
Sbjct: 376 SKAMKEITGAII---GITLVLTAVFIPMAFASDSVGAI--YKQFTLSMAVSILFSAFLAL 430
Query: 79 LVYPAIECWVGSAAPKDQSLLGEDLMTSDEEEDEHTSSACKLKSYSEFSCRYLARQHARL 138
+ PA+ C + L + + T+ E+ + + +S + RY ++ +A L
Sbjct: 431 TLTPAL-C----------ATLLKPVNTNHHEQTRF--AKWFNRGFSRMNNRYESQVNA-L 476
Query: 139 ITRPGVKMIVVFGFI 153
+ R G +M++VF F+
Sbjct: 477 VNRKG-RMMLVFVFL 490
>gi|325184909|emb|CCA19401.1| ResistanceNodulationCell Division (RND) Superfamily putative
[Albugo laibachii Nc14]
Length = 996
Score = 35.4 bits (80), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%)
Query: 18 DSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVF 62
D + L E T + G SI++++V +S+A+F +L IPAL F
Sbjct: 429 DDLLLQEITCQTMANVGPSIVVAAVSESLAYFVGTLTKIPALETF 473
>gi|157137639|ref|XP_001657108.1| hypothetical protein AaeL_AAEL003698 [Aedes aegypti]
gi|108880765|gb|EAT44990.1| AAEL003698-PA [Aedes aegypti]
Length = 886
Score = 35.4 bits (80), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 37/66 (56%)
Query: 19 SVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLL 78
++ L E G++L+ G SI ++S+ VAF S+ +P+L+ F + A +L F ++
Sbjct: 426 NLPLPERMGLMLKHAGASITVTSLTDIVAFAVGSITVLPSLQSFCIYAAFGVLMMFFFVI 485
Query: 79 LVYPAI 84
Y AI
Sbjct: 486 TFYVAI 491
>gi|315301849|ref|ZP_07872878.1| membrane protein YdfJ [Listeria ivanovii FSL F6-596]
gi|313629786|gb|EFR97890.1| membrane protein YdfJ [Listeria ivanovii FSL F6-596]
Length = 710
Score = 35.4 bits (80), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 49/93 (52%), Gaps = 8/93 (8%)
Query: 1 MFLITKTFAKYT-SKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPAL 59
+FL+++ +YT +K+ S+K TG LR++G II +++ F S P P +
Sbjct: 598 VFLMSRVHEEYTLTKDNTHSIK----TG--LRESGPVIIAAALIMFSVFISFVFAPDPMI 651
Query: 60 RVFNLQLAILILFNMFVL-LLVYPAIECWVGSA 91
+ + L +LF+ F++ L + PAI G A
Sbjct: 652 KSIGIALGFGVLFDAFIVRLTIIPAISKLFGKA 684
>gi|324502853|gb|ADY41249.1| Niemann-Pick C1 protein [Ascaris suum]
Length = 831
Score = 35.0 bits (79), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 31/46 (67%)
Query: 36 SIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVY 81
S++L+S+ + + FF +L +PA++VF+L A+ I FN F+ + +
Sbjct: 564 SMLLTSLSECLCFFLGALSSMPAVKVFSLYAALAIFFNFFLQITCF 609
>gi|195473529|ref|XP_002089045.1| GE26328 [Drosophila yakuba]
gi|194175146|gb|EDW88757.1| GE26328 [Drosophila yakuba]
Length = 1287
Score = 35.0 bits (79), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 15 NQFDSVKLNEC----TGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILI 70
+Q D K NE G +L K G S++L+S+ +S FF L +PA+R F L + +
Sbjct: 711 HQRDQRKPNETLEQQIGRILGKVGPSMLLTSLSESFCFFLGGLSDMPAVRAFALYAGVAL 770
Query: 71 LFN 73
+ +
Sbjct: 771 IID 773
>gi|324500086|gb|ADY40051.1| Niemann-Pick C1 protein [Ascaris suum]
Length = 1303
Score = 35.0 bits (79), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 31/46 (67%)
Query: 36 SIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVY 81
S++L+S+ + + FF +L +PA++VF+L A+ I FN F+ + +
Sbjct: 740 SMLLTSLSECLCFFLGALSSMPAVKVFSLYAALAIFFNFFLQITCF 785
>gi|384483429|gb|EIE75609.1| hypothetical protein RO3G_00313 [Rhizopus delemar RA 99-880]
Length = 1172
Score = 35.0 bits (79), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 1 MFLITKTFAKYTSKNQFDSVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALR 60
+F++ + + +Q +S++ E T L K G SI+LSS +++AF +++ +PA+
Sbjct: 642 IFILCHEYQRRAELDQDESIE--ERTAKTLGKMGPSILLSSASETIAFGLGTMVTMPAVS 699
Query: 61 VFNLQLAILILFNMFVL 77
F + ++ + + FVL
Sbjct: 700 SFAIMASVAVFID-FVL 715
>gi|324500269|gb|ADY40132.1| Niemann-Pick C1 protein [Ascaris suum]
Length = 1299
Score = 35.0 bits (79), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 31/46 (67%)
Query: 36 SIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLLLVY 81
S++L+S+ + + FF +L +PA++VF+L A+ I FN F+ + +
Sbjct: 740 SMLLTSLSECLCFFLGALSSMPAVKVFSLYAALAIFFNFFLQITCF 785
>gi|194859612|ref|XP_001969414.1| GG23970 [Drosophila erecta]
gi|190661281|gb|EDV58473.1| GG23970 [Drosophila erecta]
Length = 1268
Score = 35.0 bits (79), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 15 NQFDSVKLNECT----GIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILI 70
+Q D K NE G +L K G S++L+S+ +S FF L +PA+R F L + +
Sbjct: 693 HQRDQRKPNETIEQQIGRILGKVGPSMLLTSLSESFCFFLGGLSDMPAVRAFALYAGVAL 752
Query: 71 LFN 73
+ +
Sbjct: 753 IID 755
>gi|229193947|ref|ZP_04320856.1| hypothetical protein bcere0002_55660 [Bacillus cereus ATCC 10876]
gi|228589522|gb|EEK47432.1| hypothetical protein bcere0002_55660 [Bacillus cereus ATCC 10876]
Length = 773
Score = 35.0 bits (79), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 11/94 (11%)
Query: 30 LRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVL-LLVYPAIECWV 88
+R +G + + + FF L+P P ++ + LA +LF+ FV+ L + PA +
Sbjct: 644 MRDSGKVVAAAGLIMIAVFFGFMLMPDPMVKAIGMSLAFGVLFDAFVVRLTIVPAAMTLM 703
Query: 89 GSAA---PK-------DQSLLGEDLMTSDEEEDE 112
G AA PK + + GE ++ E +D+
Sbjct: 704 GKAAWYMPKWLDKILPNIDVEGESILHKSESKDK 737
>gi|167527061|ref|XP_001747863.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773612|gb|EDQ87250.1| predicted protein [Monosiga brevicollis MX1]
Length = 2209
Score = 35.0 bits (79), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 35/69 (50%)
Query: 19 SVKLNECTGIVLRKTGLSIILSSVCKSVAFFSASLIPIPALRVFNLQLAILILFNMFVLL 78
S+ +E L + G+SI ++S+ +AF S ++ +PA+ F + A +LF+
Sbjct: 1809 SLDASEHVARALARAGVSITITSLTDIIAFASGTMTALPAIEYFCVYAAFGVLFDFITQC 1868
Query: 79 LVYPAIECW 87
V+ A W
Sbjct: 1869 TVFVAFLYW 1877
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.326 0.138 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,144,716,616
Number of Sequences: 23463169
Number of extensions: 74455342
Number of successful extensions: 302673
Number of sequences better than 100.0: 600
Number of HSP's better than 100.0 without gapping: 480
Number of HSP's successfully gapped in prelim test: 120
Number of HSP's that attempted gapping in prelim test: 301919
Number of HSP's gapped (non-prelim): 794
length of query: 162
length of database: 8,064,228,071
effective HSP length: 123
effective length of query: 39
effective length of database: 9,473,225,580
effective search space: 369455797620
effective search space used: 369455797620
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 71 (32.0 bits)