BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14636
(447 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9I993|BCDO1_CHICK Beta,beta-carotene 15,15'-monooxygenase OS=Gallus gallus GN=BCMO1
PE=1 SV=1
Length = 526
Score = 229 bits (585), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 156/518 (30%), Positives = 249/518 (48%), Gaps = 82/518 (15%)
Query: 1 QDNSEVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGL 60
++ E +P++ V+G +P+W+ GVL+RNGPG +G+ ++H FD LLH F +G
Sbjct: 7 RNKEEHPEPIKAEVQGQLPTWLQGVLLRNGPGMHTIGDTKYNHWFDGLALLHSFTFKNGE 66
Query: 61 VTYQCKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQR----IATLFKPGSDNTLV 116
V Y+ K+++S++Y N A RIVV+ FGT PDPC +IF + ++ +DN L+
Sbjct: 67 VYYRSKYLRSDTYNCNIEANRIVVSEFGTMAYPDPCKNIFAKAFSYLSHTIPEFTDNCLI 126
Query: 117 SVYPIQDQVYALGDSNYMHRIDPATLDTLGKIDLAGDVTILHQTSHPLTTSDGETFNLGV 176
++ D YA ++N++ +IDP TL+TL K+D + V + TSHP S G N+G
Sbjct: 127 NIMKTGDDYYATSETNFIRKIDPQTLETLDKVDYSKYVAVNLATSHPHYDSAGNILNMGT 186
Query: 177 TLRPTG-PRYCILQL----------NDAFSYPDLSHPPPPPPSLR--------------- 210
++ G +Y + ++ F + ++ P L+
Sbjct: 187 SIVDKGRTKYVLFKIPSSVPEKEKKKSCFKHLEVVCSIPSRSLLQPSYYHSFGITENYIV 246
Query: 211 -----FRDDIDMTSTI--------------------FHVLD-KTNGSVVHRFQADSFFYL 244
F+ DI +T FH +D KT V +F D+
Sbjct: 247 FIEQPFKLDIVKLATAYIRGVNWASCLSFHKEDKTWFHFVDRKTKKEVSTKFYTDALVLY 306
Query: 245 HIINAYEDTNDG-IVVDICCYRNPAMLDCMYREAL-KNIHSTPRYAQMFRAR----PLRF 298
H INAYE+ DG +V DI YR+ ++ D Y + L K+ + + + PL++
Sbjct: 307 HHINAYEE--DGHVVFDIVAYRDNSLYDMFYLKKLDKDFEVNNKLTSIPTCKRFVVPLQY 364
Query: 299 RLD---------LASPRTAPTGK-----VRPSVICDVGCETPRMNGQHQGRSYTYFYAIS 344
D L + TA K +P ++C+ G E PR+N + G+ Y Y YA
Sbjct: 365 DKDAEVGSNLVKLPTSATAVKEKDGSIYCQPEILCE-GIELPRVNYDYNGKKYKYVYATE 423
Query: 345 ADIDRDNPGTLIKVNVQNNTCKSWSQKDVYPSEPVFVATPNARKEDEGVLLSVLLWSHHP 404
P + K+NVQ W + +PSEP+FV +P+AR+EDEGV+L+ ++ S
Sbjct: 424 VQWS-PVPTKIAKLNVQTKEVLHWGEDHCWPSEPIFVPSPDAREEDEGVVLTCVVVSEPN 482
Query: 405 TRVSLLVLNARTMQELGRVNFTTPTPVPKCLHGWYFPH 442
LL+L+A+T +ELGR + LHG + P
Sbjct: 483 KAPFLLILDAKTFKELGRATVNVEMHLD--LHGMFIPQ 518
>sp|Q9YGX2|RPE65_CHICK Retinoid isomerohydrolase OS=Gallus gallus GN=RPE65 PE=1 SV=1
Length = 533
Score = 214 bits (546), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 154/516 (29%), Positives = 244/516 (47%), Gaps = 85/516 (16%)
Query: 4 SEVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTY 63
E+ PV V G IP+W+ G L+R GPG + VG E F HLFD LLH+F G VTY
Sbjct: 20 EELSSPVTAHVTGRIPTWLRGSLLRCGPGLFEVGAEPFYHLFDGQALLHKFDFKEGHVTY 79
Query: 64 QCKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK--PGSDNTLVSVYPI 121
+F+++++Y++ +RIV+T FGT PDPC +IF R + FK +DN LV+VYP+
Sbjct: 80 HRRFVRTDAYVRAMTEKRIVITEFGTYAYPDPCKNIFSRFFSYFKGVEVTDNALVNVYPV 139
Query: 122 QDQVYALGDSNYMHRIDPATLDTLGKIDLAGDVTILHQTSHPLTTSDG----------ET 171
+ YA ++N++ +I+P TL+T+ ++DL V++ T+HP +DG +
Sbjct: 140 GEDYYACTETNFITKINPDTLETIKQVDLCKYVSVNGATAHPHVENDGTVYNIGNCFGKN 199
Query: 172 FNLGVTL-----------RPTGPRYCILQL--NDAF------------SYPDLSHPPPPP 206
F+L + P ++Q +D F +Y P
Sbjct: 200 FSLAYNIIRIPPLQADKEDPMNKSEVVVQFPCSDRFKPSYVHSFGLTPNYIVFVETPVKI 259
Query: 207 PSLRF-----------RDDIDMTSTI---FHVLDKTNGSVVH-RFQADSFFYLHIINAYE 251
L+F D + T+ HV +K G +++ +++ +F H IN +E
Sbjct: 260 NLLKFLSSWSLWGANYMDCFESNETMGVWLHVAEKKKGRLLNIKYRTSAFNLFHHINTFE 319
Query: 252 DTNDGIVVDICCYRN---------PAMLDCMYREALKNIHSTPRYAQMFRARPLR----- 297
D N ++VD+C ++ A L + E K P+ PLR
Sbjct: 320 D-NGFLIVDLCTWKGFEFVYNYLYLANLRANWDEVKKQAEKAPQPEARRYVLPLRIDKAD 378
Query: 298 ---------FRLDLASPRTAPTGKVRPSVICDV---GCETPRMN-GQHQGRSYTYFYAIS 344
+ A+ R+ T + P VI E P++N ++ G+ YTY Y +
Sbjct: 379 TGKNLVTLPYTTATATLRSDETVWLEPEVIFSGPRHAFEFPQINYKKYGGKPYTYTYGLG 438
Query: 345 ADIDRDNPGTLIKVNVQNNTCKSWSQKDVYPSEPVFVATPNARKEDEGVLLSVLLW-SHH 403
++ P L K+NV+ W + D YPSEP+FV+ P+A +ED+GV+LS+++
Sbjct: 439 --LNHFVPDRLCKLNVKTKETWVWQEPDSYPSEPIFVSHPDALEEDDGVVLSIVISPGSG 496
Query: 404 PTRVSLLVLNARTMQELGRVNFTTPTPVPKCLHGWY 439
P LL+LNA+ M E+ R PV HG +
Sbjct: 497 PKPAYLLILNAKDMSEVARAEVEVNIPV--TFHGLF 530
>sp|A9C3R8|RP65C_DANRE Retinal Mueller cells isomerohydrolase OS=Danio rerio GN=rpe65c
PE=1 SV=1
Length = 532
Score = 214 bits (545), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 153/518 (29%), Positives = 245/518 (47%), Gaps = 85/518 (16%)
Query: 4 SEVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTY 63
E+ +P+ V G IP+W+ G L+R GPG + VG+E F HLFD LLH+F + G VTY
Sbjct: 20 EELAEPIPAHVSGEIPAWLSGSLLRMGPGLFEVGDEPFYHLFDGQALLHKFDLKDGRVTY 79
Query: 64 QCKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK--PGSDNTLVSVYPI 121
+FI++++Y++ +R+V+T FGT PDPC +IF R T F+ +DN LV++YPI
Sbjct: 80 HRRFIRTDAYVRAMTEKRVVITEFGTTAYPDPCKNIFSRFFTYFQGIEVTDNCLVNIYPI 139
Query: 122 QDQVYALGDSNYMHRIDPATLDTLGKIDLAGDVTILHQTSHPLTTSD------GETFNLG 175
+ YA ++N++ ++DP TL+T+ K+DL +++ T+HP +D G F
Sbjct: 140 GEDFYACTETNFITKVDPDTLETVKKVDLCNYLSVNGLTAHPHIEADGTVYNIGNCFGKN 199
Query: 176 VTLRPTGPRYCILQLNDAFSYPDLSHPPPPPPSLRFR----------------------- 212
++L + LQ + + + P S RF+
Sbjct: 200 MSLAYNIVKIPPLQEDKSDQFEKSKILVQFPSSERFKPSYVHSFGITENHFVFVETPVKI 259
Query: 213 --------------------DDIDMTSTIFHVLDKTNGSVV-HRFQADSFFYLHIINAYE 251
+ D T FH+ K G + H+F+ +F H IN +E
Sbjct: 260 NLLKFLTSWSIRGSNYMDCFESNDKMGTWFHLAAKNPGKYIDHKFRTSAFNIFHHINCFE 319
Query: 252 DTNDGIVVDICCYRNPAML-DCMYREALKNIHSTPRYAQMFRARP--LRFRLDL------ 302
D IVVD+C ++ + + +Y L+ + A + +P R+ L L
Sbjct: 320 DQG-FIVVDLCTWKGHEFVYNYLYLANLRQNWEEVKKAALRAPQPEVRRYVLPLDIHREE 378
Query: 303 ------ASPRTAPTGKVR--------PSVICD---VGCETPRMN-GQHQGRSYTYFYAIS 344
+ P T T +R P V+ E P++N + G+ YT+ Y +
Sbjct: 379 QGKNLVSLPYTTATAVMRSDGTVWLEPEVLFSGPRQAFEFPQINYSKFNGKDYTFAYGLG 438
Query: 345 ADIDRDNPGTLIKVNVQNNTCKSWSQKDVYPSEPVFVATPNARKEDEGVLLSVLLWSHHP 404
++ P + K+NV++ W + D YPSEP+FV +P+A ED+GVLLS+++
Sbjct: 439 --LNHFVPDRICKLNVKSKETWIWQEPDAYPSEPLFVQSPDAEDEDDGVLLSIVVKPGVS 496
Query: 405 TRVS-LLVLNARTMQELGRVNFTTPTPVPKCLHGWYFP 441
R + LL+L A + E+ R PV LHG Y P
Sbjct: 497 QRPAFLLILKATDLTEIARAEVDVLIPV--TLHGIYKP 532
>sp|Q9TVB8|RPE65_CANFA Retinoid isomerohydrolase OS=Canis familiaris GN=RPE65 PE=1 SV=3
Length = 533
Score = 212 bits (539), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 156/518 (30%), Positives = 243/518 (46%), Gaps = 89/518 (17%)
Query: 4 SEVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTY 63
E+ P+ V G IP W+ G L+R GPG + VG E F HLFD LLH+F G VTY
Sbjct: 20 EELSSPLTAHVTGRIPLWLTGSLLRCGPGLFEVGSEPFYHLFDGQALLHKFDFKEGHVTY 79
Query: 64 QCKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK--PGSDNTLVSVYPI 121
+FI++++Y++ +RIV+T FGT PDPC +IF R + F+ +DN LV+VYP+
Sbjct: 80 HRRFIRTDAYVRAMTEKRIVITEFGTCAFPDPCKNIFSRFFSYFRGVEVTDNALVNVYPV 139
Query: 122 QDQVYALGDSNYMHRIDPATLDTLGKIDLAGDVTILHQTSHPLTTSD----------GET 171
+ YA ++N++ +I+P TL+T+ ++DL V++ T+HP +D G+
Sbjct: 140 GEDYYACTETNFITKINPETLETIKQVDLCNYVSVNGATAHPHIENDGTVYNIGNCFGKN 199
Query: 172 FNLGVTL-----------RPTGPRYCILQL--NDAF------------SYPDLSHPPPPP 206
F++ + P ++Q +D F +Y P
Sbjct: 200 FSIAYNIVKIPPLQADKEDPISKSEVVVQFPCSDRFKPSYVHSFGLTPNYIVFVETPVKI 259
Query: 207 PSLRF-----------RDDIDMTSTI---FHVLDKTNGSVVH-RFQADSFFYLHIINAYE 251
L+F D + T+ H+ DK ++ +++ SF H IN YE
Sbjct: 260 NLLKFLSSWSLWGANYMDCFESNETMGVWLHIADKKRKKYLNNKYRTSSFNLFHHINTYE 319
Query: 252 DTNDGIVVDICCYRN---------PAMLDCMYREALKNIHSTPRYAQMFRARPLRFRLDL 302
D N+ ++VD+CC++ A L + E KN P+ R L +D
Sbjct: 320 D-NEFLIVDLCCWKGFEFVYNYLYLANLRENWEEVKKNARKAPQ--PEVRRYVLPLNIDK 376
Query: 303 AS--------PRTAPTGKVR--------PSVICD---VGCETPRMNGQHQG-RSYTYFYA 342
A P T T +R P V+ E P++N Q G + YTY Y
Sbjct: 377 ADTGKNLVTLPNTTATATLRSDETIWLEPEVLFSGPRQAFEFPQINYQKSGGKPYTYAYG 436
Query: 343 ISADIDRDNPGTLIKVNVQNNTCKSWSQKDVYPSEPVFVATPNARKEDEGVLLSVLLWSH 402
+ ++ P L K+NV+ W + D YPSEP+FV+ P+A +ED+GV+LSV++
Sbjct: 437 LG--LNHFVPDRLCKLNVKTKETWVWQEPDSYPSEPIFVSHPDALEEDDGVVLSVVVSPG 494
Query: 403 HPTR-VSLLVLNARTMQELGRVNFTTPTPVPKCLHGWY 439
+ LL+LNA+ + E+ R PV HG +
Sbjct: 495 AGQKPAYLLILNAKDLSEVARAEVEINIPV--TFHGLF 530
>sp|Q6PBW5|RP65A_DANRE Retinoid isomerohydrolase OS=Danio rerio GN=rpe65a PE=2 SV=1
Length = 531
Score = 210 bits (534), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 156/519 (30%), Positives = 245/519 (47%), Gaps = 88/519 (16%)
Query: 4 SEVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTY 63
E+++P+ TV G IPS+I G L+R GPG + G E F HLFD L+H+F S+G VTY
Sbjct: 20 EELNEPLPATVTGRIPSFIKGSLLRLGPGLFEAGAEPFYHLFDGQALMHKFDFSNGQVTY 79
Query: 64 QCKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK--PGSDNTLVSVYPI 121
KF+K+++Y++ +R+V+T FGT PDPC +IF R + FK +DN LV+VYPI
Sbjct: 80 FRKFVKTDAYVRAITEKRVVITEFGTCAYPDPCKNIFSRFFSYFKGVEVTDNCLVNVYPI 139
Query: 122 QDQVYALGDSNYMHRIDPATLDTLGKIDLAGDVTILHQTSHPLTTSDGETFNLGVTL-RP 180
+ YA+ ++NY+ +++ TL+TL K+D+ V I T+HP DG +N+G + +
Sbjct: 140 GEDFYAVTETNYITKVNVDTLETLKKVDMCNYVNINGVTAHPHIERDGTVYNIGNCMGKG 199
Query: 181 TGPRYCILQLNDAFSYPDLSHPPPP-------PPSLRFR----DDIDMTSTIFHVL---- 225
Y I+++ + D S P P + RF+ MT F +
Sbjct: 200 ASLAYNIVRIPP--TQKDKSDPIEKSKVVVQFPSAERFKPSYVHSFGMTENYFVFVETPV 257
Query: 226 ------------------------DKTNGSVVH------------RFQADSFFYLHIINA 249
D+ G+ +H +F+ + H IN
Sbjct: 258 KINLLKFLSAWSIRGSNYMDCFESDEEKGTWIHIARKHPGEYIDYKFRTSAMGLFHHINC 317
Query: 250 YEDTNDGIVVDICCYRN---------PAMLDCMYREALKNIHSTPRYAQMFRARPLR-FR 299
YED+ IV D+C ++ A L + E +N P+ PL FR
Sbjct: 318 YEDSG-FIVFDLCAWKGFEFVYNYLWLANLRANWEEVKRNAMIAPQPEVRRYVIPLDPFR 376
Query: 300 LD-----LASPRTAPTGKVR--------PSVICD---VGCETPRMNGQH-QGRSYTYFYA 342
+ ++ P T T +R P V+ E P++N + G++YTY Y
Sbjct: 377 EEQGKNLISLPYTTATATMRADGTIWLEPEVLFSGPRQAFEFPQINYRMVNGKNYTYAYG 436
Query: 343 ISADIDRDNPGTLIKVNVQNNTCKSWSQKDVYPSEPVFVATPNARKEDEGVLLSVLLWSH 402
+ ++ P + K+NV+ W + D YPSEP+FV TP+ ED+G+L+++++
Sbjct: 437 LG--LNHFVPDRICKLNVRTKETWVWQEPDSYPSEPLFVQTPDGVDEDDGILMTIVVSPG 494
Query: 403 HPTRVSLLVLNARTMQELGRVNFTTPTPVPKCLHGWYFP 441
L+LNA+ + E+ R TPV HG Y P
Sbjct: 495 AQRPTYCLILNAKDLSEIARAEVEILTPV--TFHGMYKP 531
>sp|Q9JJS6|BCDO1_MOUSE Beta,beta-carotene 15,15'-monooxygenase OS=Mus musculus GN=Bcmo1
PE=1 SV=2
Length = 566
Score = 208 bits (529), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 151/522 (28%), Positives = 238/522 (45%), Gaps = 90/522 (17%)
Query: 1 QDNSEVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGL 60
Q+ E +PVQ V G IP+W+ G L+RNGPG VGE ++H FD LLH F I G
Sbjct: 7 QNKKEQLEPVQAKVTGSIPAWLQGTLLRNGPGMHTVGESKYNHWFDGLALLHSFSIRDGE 66
Query: 61 VTYQCKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFKPG----SDNTLV 116
V Y+ K+++S++YI N A RIVV+ FGT PDPC +IF + + +DN L+
Sbjct: 67 VFYRSKYLQSDTYIANIEANRIVVSEFGTMAYPDPCKNIFSKAFSYLSHTIPDFTDNCLI 126
Query: 117 SVYPIQDQVYALGDSNYMHRIDPATLDTLGKIDLAGDVTILHQTSHPLTTSDGETFNLGV 176
++ + YA ++NY+ +IDP TL+TL K+D V + TSHP G N+G
Sbjct: 127 NIMKCGEDFYATTETNYIRKIDPQTLETLEKVDYRKYVAVNLATSHPHYDEAGNVLNMGT 186
Query: 177 TLRPTG-PRYCILQL---------------NDAFSYPDLSHPPPPPPSLR---------- 210
++ G +Y I ++ A + +S PS
Sbjct: 187 SVVDKGRTKYVIFKIPATVPDSKKKGKSPVKHAEVFCSISSRSLLSPSYYHSFGVTENYV 246
Query: 211 ------FRDDIDMTSTIF---------HVLDKTNGSVVH------------RFQADSFFY 243
F+ DI +T + D+ + + +H +F D
Sbjct: 247 VFLEQPFKLDILKMATAYMRGVSWASCMSFDREDKTYIHIIDQRTRKPVPTKFYTDPMVV 306
Query: 244 LHIINAYEDTNDGIVV-DICCYRNPAMLDCMYREAL-KNIHSTPRYAQMFRARPLRFRLD 301
H +NAYE+ DG V+ D+ Y + ++ Y L K+ R + R RF +
Sbjct: 307 FHHVNAYEE--DGCVLFDVIAYEDSSLYQLFYLANLNKDFEEKSRLTSVPTLR--RFAVP 362
Query: 302 LASPRTAPTGK---------------------VRPSVICDVGCETPRMNGQHQGRSYTYF 340
L + A G +P V+ + G E PR+N + G+ Y Y
Sbjct: 363 LHVDKDAEVGSNLVKVSSTTATALKEKDGHVYCQPEVLYE-GLELPRINYAYNGKPYRYI 421
Query: 341 YAISADIDRDNPGTLIKVNVQNNTCKSWSQKDVYPSEPVFVATPNARKEDEGVLLSVLLW 400
+A P ++K ++ + WS++ +P+EP+FV TP A+ ED+GV+LS ++
Sbjct: 422 FAAEVQWS-PVPTKILKYDILTKSSLKWSEESCWPAEPLFVPTPGAKDEDDGVILSAIV- 479
Query: 401 SHHPTRVS-LLVLNARTMQELGRVNFTTPTPVPKCLHGWYFP 441
S P ++ LL+L+A++ EL R + + LHG + P
Sbjct: 480 STDPQKLPFLLILDAKSFTELARASVDADMHLD--LHGLFIP 519
>sp|Q16518|RPE65_HUMAN Retinoid isomerohydrolase OS=Homo sapiens GN=RPE65 PE=1 SV=3
Length = 533
Score = 205 bits (522), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 148/517 (28%), Positives = 240/517 (46%), Gaps = 87/517 (16%)
Query: 4 SEVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTY 63
E+ P+ V G IP W+ G L+R GPG + VG E F HLFD LLH+F G VTY
Sbjct: 20 EELSSPLTAHVTGRIPLWLTGSLLRCGPGLFEVGSEPFYHLFDGQALLHKFDFKEGHVTY 79
Query: 64 QCKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK--PGSDNTLVSVYPI 121
+FI++++Y++ +RIV+T FGT PDPC +IF R + F+ +DN LV+VYP+
Sbjct: 80 HRRFIRTDAYVRAMTEKRIVITEFGTCAFPDPCKNIFSRFFSYFRGVEVTDNALVNVYPV 139
Query: 122 QDQVYALGDSNYMHRIDPATLDTLGKIDLAGDVTILHQTSHPLTTSD----------GET 171
+ YA ++N++ +I+P TL+T+ ++DL V++ T+HP +D G+
Sbjct: 140 GEDYYACTETNFITKINPETLETIKQVDLCNYVSVNGATAHPHIENDGTVYNIGNCFGKN 199
Query: 172 FNLGVTL-----------RPTGPRYCILQL--NDAFSYPDLSHPPPPPPSL--------- 209
F++ + P ++Q +D F P H P+
Sbjct: 200 FSIAYNIVKIPPLQADKEDPISKSEIVVQFPCSDRFK-PSYVHSFGLTPNYIVFVETPVK 258
Query: 210 ---------------RFRDDIDMTSTI---FHVLDKTNGSVVH-RFQADSFFYLHIINAY 250
+ D + T+ H+ DK ++ +++ F H IN Y
Sbjct: 259 INLFKFLSSWSLWGANYMDCFESNETMGVWLHIADKKRKKYLNNKYRTSPFNLFHHINTY 318
Query: 251 EDTNDGIVVDICCYRNPAML-DCMY----REALKNIHSTPRYAQMFRARPLRFRLDLASP 305
ED N ++VD+CC++ + + +Y RE + + R A R L++
Sbjct: 319 ED-NGFLIVDLCCWKGFEFVYNYLYLANLRENWEEVKKNARKAPQPEVRRYVLPLNIDKA 377
Query: 306 RTAPTGKVRP-----SVICD----------------VGCETPRMNGQ-HQGRSYTYFYAI 343
T P +++C E P++N Q + G+ YTY Y +
Sbjct: 378 DTGKNLVTLPNTTATAILCSDETIWLEPEVLFSGPRQAFEFPQINYQKYCGKPYTYAYGL 437
Query: 344 SADIDRDNPGTLIKVNVQNNTCKSWSQKDVYPSEPVFVATPNARKEDEGVLLSVLLWSHH 403
++ P L K+NV+ W + D YPSEP+FV+ P+A +ED+GV+LSV++
Sbjct: 438 G--LNHFVPDRLCKLNVKTKETWVWQEPDSYPSEPIFVSHPDALEEDDGVVLSVVVSPGA 495
Query: 404 PTR-VSLLVLNARTMQELGRVNFTTPTPVPKCLHGWY 439
+ LL+LNA+ + E+ R PV HG +
Sbjct: 496 GQKPAYLLILNAKDLSEVARAEVEINIPV--TFHGLF 530
>sp|Q9XT71|RPE65_CHLAE Retinoid isomerohydrolase OS=Chlorocebus aethiops GN=RPE65 PE=2
SV=3
Length = 533
Score = 205 bits (521), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 148/517 (28%), Positives = 240/517 (46%), Gaps = 87/517 (16%)
Query: 4 SEVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTY 63
E+ P+ V G IP W+ G L+R GPG + VG E F HLFD LLH+F G VTY
Sbjct: 20 EELSSPLTAHVTGRIPLWLTGSLLRCGPGLFEVGSEPFYHLFDGQALLHKFDFKEGHVTY 79
Query: 64 QCKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK--PGSDNTLVSVYPI 121
+FI++++Y++ +RIV+T FGT PDPC +IF R + F+ +DN LV+VYP+
Sbjct: 80 HRRFIRTDAYVRAMTEKRIVITEFGTCAFPDPCKNIFSRFFSYFRGVEVTDNALVNVYPV 139
Query: 122 QDQVYALGDSNYMHRIDPATLDTLGKIDLAGDVTILHQTSHPLTTSD----------GET 171
+ YA ++N++ +I+P TL+T+ ++DL V++ T+HP +D G+
Sbjct: 140 GEDYYACTETNFITKINPETLETIKQVDLCNYVSVNGATAHPHIENDGTVYNIGNCFGKN 199
Query: 172 FNLGVTL-----------RPTGPRYCILQL--NDAFSYPDLSHPPPPPPSL--------- 209
F++ + P ++Q +D F P H P+
Sbjct: 200 FSIAYNIVKIPPLQADKEDPISKSEIVVQFPCSDRFK-PSYVHSFGLTPNYIVFVETPVK 258
Query: 210 ---------------RFRDDIDMTSTI---FHVLDKTNGSVVH-RFQADSFFYLHIINAY 250
+ D + T+ H+ DK ++ +++ F H IN Y
Sbjct: 259 INLFKFLSSWSLWGANYMDCFESNETMGVWLHIADKKRKKYLNNKYRTSPFNLFHHINTY 318
Query: 251 EDTNDGIVVDICCYRNPAML-DCMY----REALKNIHSTPRYAQMFRARPLRFRLDLASP 305
ED N ++VD+CC++ + + +Y RE + + R A R L++
Sbjct: 319 ED-NGFLIVDLCCWKGFEFVYNYLYLANLRENWEEVKKNARKAPQPEVRRYVLPLNIDKA 377
Query: 306 RTAPTGKVRP-----SVICDV----------------GCETPRMNGQ-HQGRSYTYFYAI 343
T P +++C E P++N Q + G+ YTY Y +
Sbjct: 378 DTGKNLITLPNTTATAILCSEETIWLEPEVLFSGPRQAFEFPQINYQKYCGKPYTYAYGL 437
Query: 344 SADIDRDNPGTLIKVNVQNNTCKSWSQKDVYPSEPVFVATPNARKEDEGVLLSVLLWSHH 403
++ P L K+NV+ W + D YPSEP+FV+ P+A +ED+GV+LSV++
Sbjct: 438 G--LNHFVPDRLCKLNVKTKETWVWQEPDSYPSEPIFVSHPDALEEDDGVVLSVVVSPGA 495
Query: 404 PTR-VSLLVLNARTMQELGRVNFTTPTPVPKCLHGWY 439
+ LL+LNA+ + E+ R PV HG +
Sbjct: 496 GQKPAYLLILNAKDLSEVARAEVEINIPV--TFHGLF 530
>sp|Q28175|RPE65_BOVIN Retinoid isomerohydrolase OS=Bos taurus GN=RPE65 PE=1 SV=3
Length = 533
Score = 204 bits (519), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 150/519 (28%), Positives = 241/519 (46%), Gaps = 91/519 (17%)
Query: 4 SEVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTY 63
E+ P+ V G IP W+ G L+R GPG + VG E F HLFD LLH+F G VTY
Sbjct: 20 EELSSPLTAHVTGRIPLWLTGSLLRCGPGLFEVGSEPFYHLFDGQALLHKFDFKEGHVTY 79
Query: 64 QCKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK--PGSDNTLVSVYPI 121
+FI++++Y++ +RIV+T FGT PDPC +IF R + F+ +DN LV++YP+
Sbjct: 80 HRRFIRTDAYVRAMTEKRIVITEFGTCAFPDPCKNIFSRFFSYFRGVEVTDNALVNIYPV 139
Query: 122 QDQVYALGDSNYMHRIDPATLDTLGKIDLAGDVTILHQTSHPLTTSD----------GET 171
+ YA ++N++ +++P TL+T+ ++DL V++ T+HP +D G+
Sbjct: 140 GEDYYACTETNFITKVNPETLETIKQVDLCNYVSVNGATAHPHIENDGTVYNIGNCFGKN 199
Query: 172 FNLGVTL-----------RPTGPRYCILQL--NDAFSYPDLSHPPPPPPSL--------- 209
F++ + P ++Q +D F P H P+
Sbjct: 200 FSIAYNIVKIPPLQADKEDPISKSEIVVQFPCSDRFK-PSYVHSFGLTPNYIVFVETPVK 258
Query: 210 ---------------RFRDDIDMTSTI---FHVLDKTNGSVVH-RFQADSFFYLHIINAY 250
+ D + T+ H+ DK ++ +++ F H IN Y
Sbjct: 259 INLFKFLSSWSLWGANYMDCFESNETMGVWLHIADKKRKKYINNKYRTSPFNLFHHINTY 318
Query: 251 EDTNDGIVVDICCYRN---------PAMLDCMYREALKNIHSTPRYAQMFRARPLRFRLD 301
ED ++ ++VD+CC++ A L + E KN P+ R L +D
Sbjct: 319 ED-HEFLIVDLCCWKGFEFVYNYSYLANLRENWEEVKKNARKAPQ--PEVRRYVLPLNID 375
Query: 302 LAS--------PRTAPTG--------KVRPSVICD---VGCETPRMNGQ-HQGRSYTYFY 341
A P T T + P V+ E P++N Q + G+ YTY Y
Sbjct: 376 KADTGKNLVTLPNTTATAILCSDETIWLEPEVLFSGPRQAFEFPQINYQKYGGKPYTYAY 435
Query: 342 AISADIDRDNPGTLIKVNVQNNTCKSWSQKDVYPSEPVFVATPNARKEDEGVLLSVLLWS 401
+ ++ P L K+NV+ W + D YPSEP+FV+ P+A +ED+GV+LSV++
Sbjct: 436 GLG--LNHFVPDRLCKLNVKTKETWVWQEPDSYPSEPIFVSHPDALEEDDGVVLSVVVSP 493
Query: 402 HHPTR-VSLLVLNARTMQELGRVNFTTPTPVPKCLHGWY 439
+ LL+LNA+ + E+ R PV HG +
Sbjct: 494 GAGQKPAYLLILNAKDLSEVARAEVEINIPV--TFHGLF 530
>sp|Q9HAY6|BCDO1_HUMAN Beta,beta-carotene 15,15'-monooxygenase OS=Homo sapiens GN=BCMO1
PE=1 SV=1
Length = 547
Score = 202 bits (515), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 149/505 (29%), Positives = 230/505 (45%), Gaps = 88/505 (17%)
Query: 1 QDNSEVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGL 60
++ E +PV+ V G IP+W+ G L+RNGPG VGE ++H FD LLH F I G
Sbjct: 7 RNRKEQLEPVRAKVTGKIPAWLQGTLLRNGPGMHTVGESRYNHWFDGLALLHSFTIRDGE 66
Query: 61 VTYQCKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFKPG----SDNTLV 116
V Y+ K+++S++Y N A RIVV+ FGT PDPC +IF + + +DN L+
Sbjct: 67 VYYRSKYLRSDTYNTNIEANRIVVSEFGTMAYPDPCKNIFSKAFSYLSHTIPDFTDNCLI 126
Query: 117 SVYPIQDQVYALGDSNYMHRIDPATLDTLGKIDLAGDVTILHQTSHPLTTSDGETFNLGV 176
++ + YA ++NY+ +I+P TL+TL K+D V + TSHP G N+G
Sbjct: 127 NIMKCGEDFYATSETNYIRKINPQTLETLEKVDYRKYVAVNLATSHPHYDEAGNVLNMGT 186
Query: 177 TLRPTGP-RYCILQLNDAFSYPDLSHPPP----------PPPSLR--------------- 210
++ G +Y I ++ P P SL
Sbjct: 187 SIVEKGKTKYVIFKIPATVPEGKKQGKSPWKHTEVFCSIPSRSLLSPSYYHSFGVTENYV 246
Query: 211 ------FRDDIDMTSTIF--------------------HVLD-KTNGSVVHRFQADSFFY 243
FR DI +T + H++D +T V +F D+
Sbjct: 247 IFLEQPFRLDILKMATAYIRRMSWASCLAFHREEKTYIHIIDQRTRQPVQTKFYTDAMVV 306
Query: 244 LHIINAYEDTNDG-IVVDICCYRNPAMLDCMYREALKNIHSTPRYAQMFRARPL--RFRL 300
H +NAYE+ DG IV D+ Y + ++ Y L N++ + + P RF +
Sbjct: 307 FHHVNAYEE--DGCIVFDVIAYEDNSLYQLFY---LANLNQDFKENSRLTSVPTLRRFAV 361
Query: 301 DLASPRTAPTG----KVRPS-----------VICD-----VGCETPRMNGQHQGRSYTYF 340
L + A G KV + V C G E PR+N H G+ Y Y
Sbjct: 362 PLHVDKNAEVGTNLIKVASTTATALKEEDGQVYCQPEFLYEGLELPRVNYAHNGKQYRYV 421
Query: 341 YAISADIDRDNPGTLIKVNVQNNTCKSWSQKDVYPSEPVFVATPNARKEDEGVLLSVLLW 400
+A P +IK ++ + W + D +P+EP+FV P A+ ED+GV+LS ++
Sbjct: 422 FATGVQWS-PIPTKIIKYDILTKSSLKWREDDCWPAEPLFVPAPGAKDEDDGVILSAIV- 479
Query: 401 SHHPTRVS-LLVLNARTMQELGRVN 424
S P ++ LL+L+A++ EL R +
Sbjct: 480 STDPQKLPFLLILDAKSFTELARAS 504
>sp|Q91ZQ5|RPE65_MOUSE Retinoid isomerohydrolase OS=Mus musculus GN=Rpe65 PE=1 SV=3
Length = 533
Score = 192 bits (487), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 152/517 (29%), Positives = 228/517 (44%), Gaps = 87/517 (16%)
Query: 4 SEVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTY 63
E+ P+ V G IP W+ G L+R GPG + VG E F HLFD LLH+F G VTY
Sbjct: 20 EELSSPLTAHVTGRIPLWLTGSLLRCGPGLFEVGSEPFYHLFDGQALLHKFDFKEGHVTY 79
Query: 64 QCKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK--PGSDNTLVSVYPI 121
+FI++++Y++ +RIV+T FGT PDPC +IF R + FK +DN LV++YP+
Sbjct: 80 HRRFIRTDAYVRAMTEKRIVITEFGTCAFPDPCKNIFSRFFSYFKGVEVTDNALVNIYPV 139
Query: 122 QDQVYALGDSNYMHRIDPATL------DTLGKIDLAGDVTILHQTSHPLTTSDGETFNLG 175
+ YA ++N++ +I+P TL D I + G H S + G F
Sbjct: 140 GEDYYACTETNFITKINPETLETIKQVDLCNYISVNGATAHPHIESDGTVYNIGNCFGKN 199
Query: 176 VTLR---------------PTGPRYCILQL--NDAFSYPDLSHPPPPPPSL--------- 209
T+ P ++Q +D F P H P+
Sbjct: 200 FTVAYNIIKIPPLKADKEDPINKSEVVVQFPCSDRFK-PSYVHSFGLTPNYIVFVETPVK 258
Query: 210 ---------------RFRDDIDMTSTI---FHVLDKTNGSVVH-RFQADSFFYLHIINAY 250
+ D + ++ HV DK + +++ F H IN Y
Sbjct: 259 INLFKFLSSWSLWGANYMDCFESNESMGVWLHVADKKRRKYFNNKYRTSPFNLFHHINTY 318
Query: 251 EDTNDGIVVDICCYRN---------PAMLDCMYREALKNIHSTPRYAQMFRARPLRF--- 298
ED N ++VD+CC++ A L + E +N P+ PL
Sbjct: 319 ED-NGFLIVDLCCWKGFEFVYNYLYLANLRENWEEVKRNAMKAPQPEVRRYVLPLTIDKV 377
Query: 299 ---RLDLASPRTAPTGKVR--------PSVICD---VGCETPRMNGQH-QGRSYTYFYAI 343
R + P T T +R P V+ E P++N Q G+ YTY Y +
Sbjct: 378 DTGRNLVTLPHTTATATLRSDETIWLEPEVLFSGPRQAFEFPQINYQKFGGKPYTYAYGL 437
Query: 344 SADIDRDNPGTLIKVNVQNNTCKSWSQKDVYPSEPVFVATPNARKEDEGVLLSVLLWSHH 403
++ P L K+NV+ W + D YPSEP+FV+ P+A +ED+GV+LSV++
Sbjct: 438 G--LNHFVPDKLCKLNVKTKEIWMWQEPDSYPSEPIFVSQPDALEEDDGVVLSVVVSPGA 495
Query: 404 PTR-VSLLVLNARTMQELGRVNFTTPTPVPKCLHGWY 439
+ LLVLNA+ + E+ R T PV HG +
Sbjct: 496 GQKPAYLLVLNAKDLSEIARAEVETNIPV--TFHGLF 530
>sp|Q9BYV7|BCDO2_HUMAN Beta,beta-carotene 9',10'-oxygenase OS=Homo sapiens GN=BCO2 PE=1
SV=5
Length = 579
Score = 192 bits (487), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 149/529 (28%), Positives = 242/529 (45%), Gaps = 103/529 (19%)
Query: 4 SEVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTY 63
E + + V G P W++G L+R GPG + G++ ++H FD LLH+F+++ G VTY
Sbjct: 62 EEAPRGISARVWGHFPKWLNGSLLRIGPGKFEFGKDKYNHWFDGMALLHQFRMAKGTVTY 121
Query: 64 QCKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK-PG-----SDNTLVS 117
+ KF++S++Y N A RIV++ FGT +PDPC ++F+R + F+ PG +DNT V+
Sbjct: 122 RSKFLQSDTYKANSAKNRIVISEFGTLALPDPCKNVFERFMSRFELPGKAAAMTDNTNVN 181
Query: 118 VYPIQDQVYALGDSNYMHRIDPATLDTLGKIDLAGDVTI----------LHQTSHPLTTS 167
+ Y ++N+M+++D TL+ K+D + + + L T++ + S
Sbjct: 182 YVRYKGDYYLCTETNFMNKVDIETLEKTEKVDWSKFIAVNGATAHPHYDLDGTAYNMGNS 241
Query: 168 DG-------------ETFNLGVTL---------------RPT------GPRYCILQLNDA 193
G E +LG T+ +P+ R I+ +
Sbjct: 242 FGPYGFSYKVIRVPPEKVDLGETIHGVQVICSIASTEKGKPSYYHSFGMTRNYIIFIEQP 301
Query: 194 FSYPDLSHPPPPPPSLRFRDDID---MTSTIFHVLDKTNGSVV-HRFQADSFFYLHIINA 249
F D I +T FHV++K G ++ R+ + F H INA
Sbjct: 302 LKMNLWKIATSKIRGKAFSDGISWEPQCNTRFHVVEKRTGQLLPGRYYSKPFVTFHQINA 361
Query: 250 YEDTNDGIVVDICCYRNPAMLDCMYR--------EALKNIHSTPRYAQMFRARPLRFRLD 301
+ED +++D+CC N L+ +Y+ E L +H++ ++ P RF L
Sbjct: 362 FEDQG-CVIIDLCCQDNGRTLE-VYQLQNLRKAGEGLDQVHNSAA-----KSFPRRFVLP 414
Query: 302 LASPRTAPTG---------------KVRPSVIC------------DVGCETPRMN-GQHQ 333
L AP G + ++ C + G E P++ +
Sbjct: 415 LNVSLNAPEGDNLSPLSYTSASAVKQADGTIWCSHENLHQEDLEKEGGIEFPQIYYDRFS 474
Query: 334 GRSYTYFYAISADIDRDNPG-TLIKVNVQNNTCKSWSQKDVYPSEPVFVATPNARKEDEG 392
G+ Y +FY R G +LIKV+V N T K W + YPSEPVFV P +ED G
Sbjct: 475 GKKYHFFYGCGF---RHLVGDSLIKVDVVNKTLKVWREDGFYPSEPVFVPAPGTNEEDGG 531
Query: 393 VLLSVLLWSHHPTRVSLLVLNARTMQELGRVNFTTPTPVPKCLHGWYFP 441
V+LSV++ + +LVL+A+ +ELGR P +P HG + P
Sbjct: 532 VILSVVITPNQNESNFILVLDAKNFEELGRAE--VPVQMPYGFHGTFIP 578
>sp|O70276|RPE65_RAT Retinoid isomerohydrolase OS=Rattus norvegicus GN=Rpe65 PE=2 SV=3
Length = 533
Score = 185 bits (470), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 148/517 (28%), Positives = 227/517 (43%), Gaps = 87/517 (16%)
Query: 4 SEVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTY 63
E+ P+ V G IP W+ G L+R GPG + VG E F HLFD LLH+F G VTY
Sbjct: 20 EELSTPLTAHVTGRIPLWLTGSLLRCGPGLFEVGSEPFYHLFDGQALLHKFDFKEGHVTY 79
Query: 64 QCKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK--PGSDNTLVSVYPI 121
+FI++++Y++ +RIV+T FGT PDPC +IF R + F+ +DN LV++YP+
Sbjct: 80 YRRFIRTDAYVRAMTEKRIVITEFGTCAFPDPCKNIFSRFFSYFRGVEVTDNALVNIYPV 139
Query: 122 QDQVYALGDSNYMHRIDPAT------LDTLGKIDLAGDVTILHQTSHPLTTSDGETFNLG 175
+ YA ++N++ +I+P T +D + + G H S + G F
Sbjct: 140 GEDYYACTETNFITKINPETLETIKQVDLCNYVSVNGATAHPHIESDGTVYNIGNCFGKN 199
Query: 176 VTLR---------------PTGPRYCILQL--NDAFSYPDLSHPPPPPPSL--------- 209
T+ P ++Q +D F P H P+
Sbjct: 200 FTVAYNIIKIPPLKADKEDPINKSEVVVQFPCSDRFK-PSYVHSFGLTPNYIVFVETPVK 258
Query: 210 ---------------RFRDDIDMTSTI---FHVLDKTNGSVVH-RFQADSFFYLHIINAY 250
+ D + ++ HV DK + +++ F H IN Y
Sbjct: 259 INLFKFLSSWSLWGANYMDCFESNESMGVWLHVADKKRRKYFNNKYRTSPFNLFHHINTY 318
Query: 251 EDTNDGIVVDICCYRN---------PAMLDCMYREALKNIHSTPRYAQMFRARPLRF--- 298
ED N ++VD+CC++ A L + E +N P+ PL
Sbjct: 319 ED-NGFLIVDLCCWKGFEFVYNYLYLANLRENWEEVKRNAMKAPQPEVRRYVLPLTIDKA 377
Query: 299 ---RLDLASPRTAPTG--------KVRPSVICD---VGCETPRMNGQH-QGRSYTYFYAI 343
R + P T T + P V+ E P++N Q G+ YTY Y +
Sbjct: 378 DTGRNLVTLPHTTATAILCSDETIWLEPEVLFSGPRQAFEFPQINYQKCGGKPYTYAYGL 437
Query: 344 SADIDRDNPGTLIKVNVQNNTCKSWSQKDVYPSEPVFVATPNARKEDEGVLLSVLLWSHH 403
++ P L K+NV+ W + D YPSEP+FV+ P+A +ED+GV+LSV++
Sbjct: 438 G--LNHFVPDKLCKLNVKTKEIWMWQEPDSYPSEPIFVSQPDALEEDDGVVLSVVVSPGA 495
Query: 404 PTR-VSLLVLNARTMQELGRVNFTTPTPVPKCLHGWY 439
+ LLVLNA+ + E+ R T PV HG +
Sbjct: 496 GQKPAYLLVLNAKDLSEIARAEVETNIPV--TFHGLF 530
>sp|Q8AXN9|RPE65_CYNPY Retinoid isomerohydrolase OS=Cynops pyrrhogaster GN=RPE65 PE=2 SV=3
Length = 533
Score = 163 bits (412), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 112/174 (64%), Gaps = 2/174 (1%)
Query: 4 SEVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTY 63
E+ P+ V G IP W+ G L+R GPG + VG E F HLFD LLH+F G VTY
Sbjct: 20 EELASPITAHVTGRIPVWLTGSLLRCGPGLFEVGSEQFYHLFDGQALLHKFDFKEGHVTY 79
Query: 64 QCKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK--PGSDNTLVSVYPI 121
+FI++++Y++ +RIV+T FGT PDPC +IF R + F+ +DNTLV+VYP+
Sbjct: 80 HRRFIRTDTYVRAMTEKRIVITEFGTFAFPDPCKNIFSRFLSYFQGLEVTDNTLVNVYPV 139
Query: 122 QDQVYALGDSNYMHRIDPATLDTLGKIDLAGDVTILHQTSHPLTTSDGETFNLG 175
+ YA ++NY+ +++P TL+T+ K+DL V+I T+HPL +DG +N+G
Sbjct: 140 GEDYYACTETNYITKVNPETLETIKKVDLCNYVSINGVTAHPLIENDGTVYNIG 193
Score = 89.7 bits (221), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 118/247 (47%), Gaps = 36/247 (14%)
Query: 223 HVLDKTNGSVVH-RFQADSFFYLHIINAYEDTNDGIVVDICCYRNPAML-DCMY----RE 276
HV +K G ++ +++ +F H IN YED + ++VD+CC++ + + +Y RE
Sbjct: 290 HVAEKLTGEYLNIKYRTSAFNLFHHINTYED-HGFLIVDLCCWKGFEFIYNYLYLANMRE 348
Query: 277 ALKNIHSTPRYAQMFRARPLRFRLDLAS----------PRTAPTGKVR--------PSVI 318
+ + A R LD+ P T T +R P V+
Sbjct: 349 NWEEVKRNAEKAPQPEVRRYVLPLDIHKVDTGKNLVNLPYTTATAILRSDETIWLEPEVL 408
Query: 319 CD---VGCETPRMN-GQHQGRSYTYFYAISADIDRDNPGTLIKVNVQNNTCKSWSQKDVY 374
+ E P++N + G+ YT+ Y + ++ P L K+NV+ W + D Y
Sbjct: 409 FSGPRLAFEFPQINYKKFGGKDYTFAYGLG--LNHFVPDRLSKLNVKTKEIWVWQEPDSY 466
Query: 375 PSEPVFVATPNARKEDEGVLLSVLLWSHHPTR--VSLLVLNARTMQELGRVNFTTPTPVP 432
PSEP+FV+ P+A +ED+GV+LSV++ + P + LL+LNA+ M E+ R PV
Sbjct: 467 PSEPIFVSQPDAMEEDDGVVLSVIV-NPGPGQKPAFLLILNAKDMSEIARAEVDINIPV- 524
Query: 433 KCLHGWY 439
HG Y
Sbjct: 525 -TFHGMY 530
>sp|Q9YI25|RPE65_AMBTI Retinoid isomerohydrolase OS=Ambystoma tigrinum GN=RPE65 PE=2 SV=3
Length = 533
Score = 158 bits (400), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 75/177 (42%), Positives = 110/177 (62%), Gaps = 2/177 (1%)
Query: 1 QDNSEVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGL 60
+ E+ PV V G IP W+ G L+R GPG + VG E F HLFD LLH+F+ G
Sbjct: 17 ESTEELVAPVTAQVTGRIPVWLSGSLLRCGPGLFEVGSEQFYHLFDGQALLHKFEFKGGH 76
Query: 61 VTYQCKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK--PGSDNTLVSV 118
V Y +FI++++Y++ +RIV+T FGT PDPC +IF R + F+ +DN LV+V
Sbjct: 77 VIYHRRFIRTDTYVRAMTEKRIVITEFGTFAFPDPCKNIFSRFLSYFQGLEVTDNALVNV 136
Query: 119 YPIQDQVYALGDSNYMHRIDPATLDTLGKIDLAGDVTILHQTSHPLTTSDGETFNLG 175
YP+ + YA ++NY+ +I+P TL+T+ K+DL V+I T+HP DG +N+G
Sbjct: 137 YPVGEDYYACTETNYITKINPETLETVKKVDLCNYVSINGVTAHPHIEHDGTVYNIG 193
Score = 92.0 bits (227), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 118/246 (47%), Gaps = 34/246 (13%)
Query: 223 HVLDKTNGSVVH-RFQADSFFYLHIINAYEDTNDGIVVDICCYRNPAML-DCMY----RE 276
HV +K G ++ +++ +F H IN YED + ++VD+CC++ + + +Y RE
Sbjct: 290 HVAEKHTGEYLNIKYRTSAFNLFHHINTYED-HGFLIVDLCCWKGFEFVYNYLYLANLRE 348
Query: 277 ALKNIHSTPRYAQMFRARPLRFRLDLAS----------PRTAPTGKVR--------PSVI 318
+ + + R LD+ P T T +R P V+
Sbjct: 349 NWEEVKRSAEKPPQPEVRRYVLPLDIHKVDTGKNLVNLPYTTATAVLRSDETIWLEPEVL 408
Query: 319 CD---VGCETPRMN-GQHQGRSYTYFYAISADIDRDNPGTLIKVNVQNNTCKSWSQKDVY 374
E P++N +H G+ YTY Y + ++ P L K+NV+ W + D Y
Sbjct: 409 FSGPRQAFEFPQINYKKHGGKDYTYAYGVG--LNHFVPDRLSKLNVKTKETWVWQEPDTY 466
Query: 375 PSEPVFVATPNARKEDEGVLLSVLLWSHHPTRVS-LLVLNARTMQELGRVNFTTPTPVPK 433
PSEP+FV+ P+A +ED+GV+LSV++ + + LL+LNA+ M E+ R + PV
Sbjct: 467 PSEPIFVSQPDAIEEDDGVVLSVVISPGEGQKPAFLLILNAKDMSEIARAEVDSNIPV-- 524
Query: 434 CLHGWY 439
HG +
Sbjct: 525 TFHGMF 530
>sp|A9C3R9|RP65B_DANRE All-trans-retinyl ester 13-cis isomerohydrolase OS=Danio rerio
GN=rpe65b PE=1 SV=1
Length = 532
Score = 156 bits (394), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 113/174 (64%), Gaps = 2/174 (1%)
Query: 4 SEVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTY 63
E+ +P+ V G IP+W+ G L+R GPG + +G+E F+HLFD L+H+F + G VTY
Sbjct: 20 EELAEPIPAHVSGKIPAWLSGSLLRMGPGLFEIGDEPFNHLFDGQALIHKFDLKDGRVTY 79
Query: 64 QCKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFKPG--SDNTLVSVYPI 121
KFI++++Y++ +R+V+T GT PDPC +IF R T F+ +DN V++YPI
Sbjct: 80 HRKFIRTDAYVRAMTEKRVVITELGTAAYPDPCKNIFSRFFTYFQGTEVTDNCSVNIYPI 139
Query: 122 QDQVYALGDSNYMHRIDPATLDTLGKIDLAGDVTILHQTSHPLTTSDGETFNLG 175
+ YA ++N++ +++P TL+T+ K+DL +++ T+HP +DG +N+G
Sbjct: 140 GEDFYACTETNFITKVNPDTLETIKKVDLCNYLSVNGLTAHPHIEADGTVYNIG 193
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 118/256 (46%), Gaps = 36/256 (14%)
Query: 216 DMTSTIFHVLDKTNGSVV-HRFQADSFFYLHIINAYEDTNDGIVVDICCYRNPAML-DCM 273
D T FH+ K G + H+F+ +F H IN +ED IVVD+C ++ + + +
Sbjct: 283 DRMGTWFHLAAKNPGKYIDHKFRTSAFNIFHHINCFEDQG-FIVVDLCTWKGHEFVYNYL 341
Query: 274 YREALKNIHSTPRYAQMFRARP--LRFRLDLASPRTAPTGK--------VRPSVICDVGC 323
Y L+ + A + +P R+ L L R GK +V+C G
Sbjct: 342 YLANLRQNWEEVKKAALRAPQPEVRRYVLPLDIHREE-QGKNLVSLPYTTATAVMCSDGT 400
Query: 324 ----------------ETPRMN-GQHQGRSYTYFYAISADIDRDNPGTLIKVNVQNNTCK 366
E P++N + G+ YT+ Y + ++ P + K+NV++
Sbjct: 401 VWLEPEVLFSGPRQAFEFPQINYSKFNGKDYTFAYGLG--LNHFVPDRICKLNVKSKETW 458
Query: 367 SWSQKDVYPSEPVFVATPNARKEDEGVLLSVLLWSHHPTRVS-LLVLNARTMQELGRVNF 425
W + D YPSEP+FV +P+A ED+GVLLS+++ R + LL+L A + E+ R
Sbjct: 459 IWQEPDAYPSEPLFVQSPDAEDEDDGVLLSIVVKPGVSQRPAFLLILKATDLTEIARAE- 517
Query: 426 TTPTPVPKCLHGWYFP 441
+P LHG Y P
Sbjct: 518 -VDVLIPLTLHGIYKP 532
>sp|Q91XT5|BCDO1_RAT Beta,beta-carotene 15,15'-monooxygenase OS=Rattus norvegicus
GN=Bcmo1 PE=2 SV=1
Length = 566
Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 112/195 (57%), Gaps = 5/195 (2%)
Query: 1 QDNSEVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGL 60
++ E +P++ TV G IP+W+ G L+RNGPG VG+ ++H FD LLH F I G
Sbjct: 7 RNKKEQLEPLRATVTGSIPAWLQGTLLRNGPGMHTVGDSKYNHWFDGLALLHSFSIRDGE 66
Query: 61 VTYQCKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFKPG----SDNTLV 116
V Y+ K+++S++Y N A RIVV+ FGT PDPC +IF + + +DN L+
Sbjct: 67 VFYRSKYLQSDTYNANIEANRIVVSEFGTMAYPDPCKNIFSKAFSYLSHTIPDFTDNCLI 126
Query: 117 SVYPIQDQVYALGDSNYMHRIDPATLDTLGKIDLAGDVTILHQTSHPLTTSDGETFNLGV 176
++ + YA ++NY+ +IDP TL+TL K+D V + TSHP G N+G
Sbjct: 127 NIMKCGEDFYATTETNYIRKIDPQTLETLEKVDYRKYVAVNLATSHPHYDEAGNVLNMGT 186
Query: 177 TLR-PTGPRYCILQL 190
++ G +Y + ++
Sbjct: 187 SIADKGGTKYVMFKI 201
Score = 92.0 bits (227), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 115/247 (46%), Gaps = 34/247 (13%)
Query: 220 TIFHVLD-KTNGSVVHRFQADSFFYLHIINAYEDTNDGIVV-DICCYRNPAMLDCMYREA 277
T H++D KT V +F D H +NAYE+ DG V+ D+ Y + ++ Y
Sbjct: 282 TYIHIIDQKTRKPVPTKFYTDPMVVFHHVNAYEE--DGCVLFDVIAYEDNSLYQLFYLAN 339
Query: 278 L-KNIHSTPRYAQMFRARPLRFRLDLASPRTAPTGK---------------------VRP 315
L K+ R + R RF + L + A G +P
Sbjct: 340 LNKDFEEKSRLTSVPTLR--RFAVPLHVDKDAEVGSNLVKVSSTTATALKEKDDHVYCQP 397
Query: 316 SVICDVGCETPRMNGQHQGRSYTYFYAISADIDRDNPGTLIKVNVQNNTCKSWSQKDVYP 375
V+ + G E PR+N H G+ Y Y +A P ++K +V + WS++ +P
Sbjct: 398 EVLYE-GLELPRINYAHNGKPYRYIFAAEVQWS-PVPTKILKYDVLTKSSLKWSEESCWP 455
Query: 376 SEPVFVATPNARKEDEGVLLSVLLWSHHPTRVS-LLVLNARTMQELGRVNFTTPTPVPKC 434
+EP+FV TP A+ ED+GV+LS ++ S P ++ LL+L+A++ EL R + +
Sbjct: 456 AEPLFVPTPGAKDEDDGVILSAII-STDPQKLPFLLILDAKSFTELARASVDVDMHLD-- 512
Query: 435 LHGWYFP 441
LHG + P
Sbjct: 513 LHGLFIP 519
>sp|Q99NF1|BCDO2_MOUSE Beta,beta-carotene 9',10'-oxygenase OS=Mus musculus GN=Bco2 PE=1
SV=1
Length = 532
Score = 143 bits (361), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 112/189 (59%), Gaps = 2/189 (1%)
Query: 4 SEVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTY 63
E V V G IP W++G L+R GPG + G++ ++H FD LLH+F++ G VTY
Sbjct: 19 EETLSAVSARVRGHIPEWLNGYLLRVGPGKFEFGKDRYNHWFDGMALLHQFRMERGTVTY 78
Query: 64 QCKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFKP--GSDNTLVSVYPI 121
+ KF++S++Y N A RIV++ FGT +PDPC SIF+R + F+P +DNT V+
Sbjct: 79 KSKFLQSDTYKANSAGGRIVISEFGTLALPDPCKSIFERFMSRFEPPTMTDNTNVNFVQY 138
Query: 122 QDQVYALGDSNYMHRIDPATLDTLGKIDLAGDVTILHQTSHPLTTSDGETFNLGVTLRPT 181
+ Y ++N+M+++D L+ K+D + + + T+HP DG +N+G + P
Sbjct: 139 KGDYYMSTETNFMNKVDIEMLERTEKVDWSKFIAVNGATAHPHYDPDGTAYNMGNSYGPR 198
Query: 182 GPRYCILQL 190
G Y I+++
Sbjct: 199 GSCYNIIRV 207
Score = 107 bits (268), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/255 (32%), Positives = 121/255 (47%), Gaps = 38/255 (14%)
Query: 219 STIFHVLDKTNGSVV-HRFQADSFFYLHIINAYEDTNDGIVVDICCYRNPAMLDCMYREA 277
+T FHV+DK G ++ + + F H INA+ED IV+D+CC + LD +
Sbjct: 283 NTRFHVVDKHTGQLLPGMYYSMPFLTYHQINAFEDQG-CIVIDLCCQDDGRSLDLYQLQN 341
Query: 278 LKNIHSTPRYAQMFRAR--PLRFRLDLASPRTAPTGK-VRP--------------SVIC- 319
L+ +A+ P RF L L A GK + P + C
Sbjct: 342 LRKAGEGLDQVYELKAKSFPRRFVLPLDVSVDAAEGKNLSPLSYSSASAVKQGDGEIWCS 401
Query: 320 -----------DVGCETPRMN-GQHQGRSYTYFYAISADIDRDNPG-TLIKVNVQNNTCK 366
+ G E P++N G+ G+ Y++FY R G +LIKV+V N T +
Sbjct: 402 PENLHHEDLEEEGGIEFPQINYGRFNGKKYSFFYGCGF---RHLVGDSLIKVDVTNKTLR 458
Query: 367 SWSQKDVYPSEPVFVATPNARKEDEGVLLSVLLWSHHPTRVSLLVLNARTMQELGRVNFT 426
W ++ YPSEPVFV P A +ED GV+LSV++ + LLVL+A++ ELGR
Sbjct: 459 VWREEGFYPSEPVFVPVPGADEEDSGVILSVVITPNQSESNFLLVLDAKSFTELGRAE-- 516
Query: 427 TPTPVPKCLHGWYFP 441
P +P HG + P
Sbjct: 517 VPVQMPYGFHGTFVP 531
>sp|Q5RF16|BCDO2_PONAB Beta,beta-carotene 9',10'-oxygenase OS=Pongo abelii GN=BCO2 PE=2
SV=1
Length = 557
Score = 141 bits (356), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 115/193 (59%), Gaps = 6/193 (3%)
Query: 4 SEVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTY 63
E + + V G P W++G L+R GPG + G++ ++H FD LLH+F+++ G VTY
Sbjct: 39 EEAPRGISARVRGHFPKWLNGSLLRTGPGKFEFGKDKYNHWFDGMALLHQFRMAKGTVTY 98
Query: 64 QCKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK-PG-----SDNTLVS 117
+ KF++S++Y N A RIV++ FGT +PDPC ++F+R + F+ PG +DNT V+
Sbjct: 99 RSKFLQSDTYKANSAKNRIVISEFGTLALPDPCKNVFERFMSRFELPGKAAAMTDNTNVN 158
Query: 118 VYPIQDQVYALGDSNYMHRIDPATLDTLGKIDLAGDVTILHQTSHPLTTSDGETFNLGVT 177
+ Y ++N+M+++D TL+ K+D + + + T+HP DG +N+G +
Sbjct: 159 YVRYKGDYYLCTETNFMNKVDIETLEKTEKVDWSKFIAVNGATAHPHYDPDGTAYNMGNS 218
Query: 178 LRPTGPRYCILQL 190
P G Y ++++
Sbjct: 219 FGPYGFSYKVIRV 231
Score = 105 bits (261), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 116/256 (45%), Gaps = 39/256 (15%)
Query: 219 STIFHVLDKTNGSVV-HRFQADSFFYLHIINAYEDTNDGIVVDICCYRNPAMLDCMYREA 277
+T FHV+DK G ++ R+ + F H INA+ED +++D+CC N L+ +
Sbjct: 307 NTWFHVVDKRTGQLLPGRYYSKPFVTFHQINAFEDQG-CVIIDLCCQDNGRTLEVYQLQN 365
Query: 278 LKNIHST--PRYAQMFRARPLRFRLDLASPRTAPTG---------------KVRPSVIC- 319
L+ Y ++ P RF L L AP G + ++ C
Sbjct: 366 LRKAGEGLDQVYNSAAKSFPRRFVLPLNVSLNAPEGDNLSPLSYTSASAVKQADGTIWCS 425
Query: 320 -----------DVGCETPRMN-GQHQGRSYTYFYAISAD--IDRDNPGTLIKVNVQNNTC 365
+ G E P++ Q G+ Y +FY + D +LIKV+V N T
Sbjct: 426 HENLHQEDLEKEGGIEFPQIYYDQFSGKKYHFFYGCGFRHLVGGD---SLIKVDVVNKTL 482
Query: 366 KSWSQKDVYPSEPVFVATPNARKEDEGVLLSVLLWSHHPTRVSLLVLNARTMQELGRVNF 425
K W + YPSEPVFV P +ED GV+LSV++ + LLVL+A+ ELGR
Sbjct: 483 KVWREDGFYPSEPVFVPAPGTNEEDGGVILSVVITPNQNESNFLLVLDAKNFGELGRAE- 541
Query: 426 TTPTPVPKCLHGWYFP 441
P +P HG + P
Sbjct: 542 -VPVQMPYGFHGTFIP 556
>sp|Q8VY26|CCD8_ARATH Carotenoid cleavage dioxygenase 8, chloroplastic OS=Arabidopsis
thaliana GN=CCD8 PE=1 SV=1
Length = 570
Score = 138 bits (348), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 127/491 (25%), Positives = 209/491 (42%), Gaps = 76/491 (15%)
Query: 13 TVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQCKFIKSES 72
TV+G IP+W++G +RNGPG WN+G+ F HLFD L + + G + + ++S++
Sbjct: 96 TVQGKIPTWLNGTYLRNGPGLWNIGDHDFRHLFDGYSTLVKLQFDGGRIFAAHRLLESDA 155
Query: 73 YIKNHAARRIVVTGFGTR-----FVPDPCASIFQRIATLFKPGS--DNTLVSVYPIQD-Q 124
Y R+ F +P + I + I LF S DN V + D +
Sbjct: 156 YKAAKKHNRLCYREFSETPKSVIINKNPFSGIGE-IVRLFSGESLTDNANTGVIKLGDGR 214
Query: 125 VYALGDSNYMH-RIDPATLDTLGKI---DLAGDVTILHQTSHPLTTSDGETFNLGVTLRP 180
V L ++ +D TL+T+GK D+ D I Q++HP+ T + E + L L
Sbjct: 215 VMCLTETQKGSILVDHETLETIGKFEYDDVLSDHMI--QSAHPIVT-ETEMWTLIPDLVK 271
Query: 181 TGPRYCILQLND--------------------------------------AFSYPDLSHP 202
G R ++ +S +L
Sbjct: 272 PGYRVVRMEAGSNKREVVGRVRCRSGSWGPGWVHSFAVTENYVVIPEMPLRYSVKNLLRA 331
Query: 203 PPPPPSLRFRDDIDMTSTIFHVLDKTNGSVVHRFQADSFFYLHIINAYEDTNDG-----I 257
P P L + HV+ K G VV + ++ H INAYE+ +G +
Sbjct: 332 EPTP--LYKFEWCPQDGAFIHVMSKLTGEVVASVEVPAYVTFHFINAYEEDKNGDGKATV 389
Query: 258 VVDICCYRNP--AMLDCMYREALKNIHSTPRYAQMFRARPLRFRLDLASPRTAPTGKVRP 315
++ CC N +LD + + L++ H + + AR RFR+ L + GK+
Sbjct: 390 IIADCCEHNADTRILDMLRLDTLRSSHG---HDVLPDARIGRFRIPLDGSKY---GKLET 443
Query: 316 SVICDV---GCETPRMNGQHQGRSYTYFYAISADIDRDNPGTLIKVNVQNNTCKSWSQKD 372
+V + + +N + G+ Y Y YA A + P L KV++ K+W +
Sbjct: 444 AVEAEKHGRAMDMCSINPLYLGQKYRYVYACGAQRPCNFPNALSKVDIVEKKVKNWHEHG 503
Query: 373 VYPSEPVFVATPNARKEDEGVLLSVLLWSHHPTRVSLLVLNARTMQELGRVNFTTPTPVP 432
+ PSEP FV P A ED+GV++S++ S ++L+ + +E+ R F P +P
Sbjct: 504 MIPSEPFFVPRPGATHEDDGVVISIV--SEENGGSFAILLDGSSFEEIARAKF--PYGLP 559
Query: 433 KCLHGWYFPHE 443
LHG + P +
Sbjct: 560 YGLHGCWIPKD 570
>sp|Q8HXG8|BCDO2_MACFA Beta,beta-carotene 9',10'-oxygenase OS=Macaca fascicularis GN=BCO2
PE=2 SV=2
Length = 556
Score = 138 bits (348), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 114/193 (59%), Gaps = 6/193 (3%)
Query: 4 SEVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTY 63
E + + V G P W++G L+R GPG + G++ ++H FD LLH+F+++ G VTY
Sbjct: 39 EEAPRGISARVWGHFPKWLNGSLLRIGPGKFEFGKDKYNHWFDGMALLHQFRMAKGTVTY 98
Query: 64 QCKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK-PG-----SDNTLVS 117
+ KF++S++Y N A RIV++ FGT PDPC ++F+R + F+ PG +DNT V+
Sbjct: 99 RSKFLQSDTYKANSAKNRIVMSEFGTLATPDPCKNVFERFMSRFELPGKAAAMTDNTNVN 158
Query: 118 VYPIQDQVYALGDSNYMHRIDPATLDTLGKIDLAGDVTILHQTSHPLTTSDGETFNLGVT 177
+ Y ++N+M+++D TL+ K+D + + + T+HP DG +N+G +
Sbjct: 159 YVRYKGDYYLCTETNFMNKVDIETLEKTEKVDWSKFIAVNGATAHPHYDPDGTAYNMGNS 218
Query: 178 LRPTGPRYCILQL 190
P G Y ++++
Sbjct: 219 FGPFGFSYKVIRV 231
Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/255 (32%), Positives = 119/255 (46%), Gaps = 38/255 (14%)
Query: 219 STIFHVLDKTNGSVV-HRFQADSFFYLHIINAYEDTNDGIVVDICCYRNPAMLDCMYREA 277
+T FHV+DK G ++ R+ + F H INA+ED +++D+CC N +L+ +
Sbjct: 307 NTRFHVVDKHTGQLLPGRYYSKPFVAFHHINAFEDQG-CVIIDLCCQDNGRILEVYQLQN 365
Query: 278 LKNIHST--PRYAQMFRARPLRFRLDLASPRTAPTG---------------KVRPSVIC- 319
L+ Y R+ P RF L L AP G + ++ C
Sbjct: 366 LRKAGEELDQVYNSAGRSFPRRFVLPLNVSLNAPEGDNLSPLSYTSASAVKQADGTIWCS 425
Query: 320 -----------DVGCETPRMN-GQHQGRSYTYFYAISADIDRDNPG-TLIKVNVQNNTCK 366
+ G E P++ GQ G+ Y +FY R G +LIKV+V N T K
Sbjct: 426 HENLHQEDLEKEGGIEFPQIYYGQFSGKKYRFFYGCGF---RHLVGDSLIKVDVVNKTLK 482
Query: 367 SWSQKDVYPSEPVFVATPNARKEDEGVLLSVLLWSHHPTRVSLLVLNARTMQELGRVNFT 426
W + YPSEPVFV P +ED GV+LSV++ + LLVL+A+ +ELGR
Sbjct: 483 VWREDGFYPSEPVFVPVPGTNEEDGGVILSVVITPNQNESNFLLVLDAKNFEELGRAE-- 540
Query: 427 TPTPVPKCLHGWYFP 441
P +P HG + P
Sbjct: 541 VPVQMPYGFHGTFIP 555
>sp|P74334|ACOX_SYNY3 Apocarotenoid-15,15'-oxygenase OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=sll1541 PE=1 SV=1
Length = 490
Score = 110 bits (274), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 119/473 (25%), Positives = 196/473 (41%), Gaps = 74/473 (15%)
Query: 14 VEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKI-SSGLVTYQCKFIKSES 72
VEG IP + G L RNGPG +G+ H FD G++ FK G V +Q KF++++
Sbjct: 38 VEGSIPPDLQGTLYRNGPGLLEIGDRPLKHPFDGDGMVTAFKFPGDGRVHFQSKFVRTQG 97
Query: 73 YIKNHAARRIVVTG-FGTRFVPDPCASIFQRIATLFKPGSDNTLVSVYPIQDQVYALGDS 131
Y++ A +++ G FG++ P + I L NT ++ + D++ AL +
Sbjct: 98 YVEEQKAGKMIYRGVFGSQ----PAGGWLKTIFDLRLKNIANTNITYW--GDRLLALWEG 151
Query: 132 NYMHRIDPATLDTLGKIDLAGDVT-----ILHQTSHPLTTSDGE-----TFNL------- 174
HR++P+ L T+G DL G + H P +T DG TF++
Sbjct: 152 GQPHRLEPSNLATIGLDDLGGILAEGQPLSAHPRIDPASTFDGGQPCYVTFSIKSSLSST 211
Query: 175 --GVTLRPTG----------------------PRYCILQLNDAF--SYPDLSHPPPPPPS 208
+ L P G P Y I N+ P L
Sbjct: 212 LTLLELDPQGKLLRQKTETFPGFAFIHDFAITPHYAIFLQNNVTLNGLPYLFGLRGAGEC 271
Query: 209 LRFRDDIDMTSTIFHVLDKTNGSVVHRFQADSFFYLHIINAYEDTNDGIVVDICCYRNPA 268
++F D +L +G + R + F H NA+E+ N I++D CY +
Sbjct: 272 VQFHPDKPAQI----ILVPRDGGEIKRIPVQAGFVFHHANAFEE-NGKIILDSICYNSLP 326
Query: 269 MLDCMYREALKNIHSTPRYAQMFRARPLRFRLDLASPRTAPTGKVRPSVICDVGCETPRM 328
+D + ST + + + RF +D A+ V ++ CE P +
Sbjct: 327 QVDTD-----GDFRST-NFDNLDPGQLWRFTIDPAA------ATVEKQLMVSRCCEFPVV 374
Query: 329 NGQHQGRSYTYFYAISADIDRDNP--GTLIKVNVQNN--TCKSWSQKDVYPSEPVFVATP 384
+ Q GR Y Y Y +A N ++KV++++ T +S++ + EP+FV P
Sbjct: 375 HPQQVGRPYRYVYMGAAHHSTGNAPLQAILKVDLESGTETLRSFAPHG-FAGEPIFVPRP 433
Query: 385 NARKEDEGVLLSVLLWSHHPTRVSLLVLNARTMQELGRVNFTTPTPVPKCLHG 437
ED+G LL L++ R L++L+A+ + +P LHG
Sbjct: 434 GGVAEDDGWLL-CLIYKADLHRSELVILDAQDITAPAIATLKLKHHIPYPLHG 485
>sp|O24592|NCED1_MAIZE 9-cis-epoxycarotenoid dioxygenase 1, chloroplastic OS=Zea mays
GN=VP14 PE=1 SV=2
Length = 604
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 117/488 (23%), Positives = 183/488 (37%), Gaps = 81/488 (16%)
Query: 14 VEGVIPSWIDGVLIRNGPGSWNVGEESFD-----HLFDCSGLLHRFKISSGLV-TYQCKF 67
V G IP +IDGV RNG FD HLFD G++H +I +G +Y C+F
Sbjct: 141 VSGRIPPFIDGVYARNG------ANPCFDPVAGHHLFDGDGMVHALRIRNGAAESYACRF 194
Query: 68 IKSESYIKNHA-ARRIVVTGFGTRFVPDPCASI---FQRIATLFKPGSDNTLVS----VY 119
++ + A R + G A + + R A S T V+ VY
Sbjct: 195 TETARLRQERAIGRPVFPKAIGELHGHSGIARLALFYARAACGLVDPSAGTGVANAGLVY 254
Query: 120 PIQDQVYALGDSNYMHRI---DPATLDTLGKIDLAGDVTILHQTSHPLTTSDGETFNLGV 176
++ A+ + + + + D L+T+G+ D G + L + GE L
Sbjct: 255 -FNGRLLAMSEDDLPYHVRVADDGDLETVGRYDFDGQLGCAMIAHPKLDPATGELHALSY 313
Query: 177 TL-----------RPTG--------PRYCILQLNDAFSYPDLSHPPPPPPSLRFRDDIDM 217
+ RP G P ++D +L P + ++ +
Sbjct: 314 DVIKRPYLKYFYFRPDGTKSDDVEIPLEQPTMIHDFAITENLVVVPDHQVVFKLQEMLRG 373
Query: 218 TSTIFHVLDKTNGS---VVHRFQADSF----------FYLHIINAYEDTNDGIVVDICCY 264
S + VLDK S V+ + AD+ F H+ NA+ED G VV I
Sbjct: 374 GSPV--VLDKEKTSRFGVLPKHAADASEMAWVDVPDCFCFHLWNAWEDEATGEVVVIGSC 431
Query: 265 RNPAMLDCMYREALKNIHSTPRYAQMFRARPLRFRLDLASPRTAPTGKVRPSVICDVGCE 324
PA D ++ E+ + + S RLD + R+ + PS V E
Sbjct: 432 MTPA--DSIFNESDERLESV----------LTEIRLDARTGRSTRRAVLPPSQ--QVNLE 477
Query: 325 TPRMNGQHQGRSYTYFYAISADIDRDNPGTLIKVNVQNNTCKSWSQKD-VYPSEPVFV-- 381
+N GR Y Y A+ G KV++ + + + EP FV
Sbjct: 478 VGMVNRNLLGRETRYAYLAVAEPWPKVSG-FAKVDLSTGELTKFEYGEGRFGGEPCFVPM 536
Query: 382 --ATPNARKEDEGVLLSVLLWSHHPTRVSLLVLNARTMQELGRVNFTTPTPVPKCLHGWY 439
A + R ED+G +L+ + LLV+NA M+ V P+ VP HG +
Sbjct: 537 DPAAAHPRGEDDGYVLT-FVHDERAGTSELLVVNAADMRLEATVQL--PSRVPFGFHGTF 593
Query: 440 FPHERKDA 447
+ +A
Sbjct: 594 ITGQELEA 601
>sp|Q9C6Z1|NCED5_ARATH Probable 9-cis-epoxycarotenoid dioxygenase NCED5, chloroplastic
OS=Arabidopsis thaliana GN=NCED5 PE=1 SV=1
Length = 589
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 108/476 (22%), Positives = 182/476 (38%), Gaps = 75/476 (15%)
Query: 13 TVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQCKFIKSES 72
+V+G IP IDGV +RNG S HLFD G++H KI++G +Y C+F ++E
Sbjct: 130 SVDGKIPDCIDGVYLRNGANPL-FEPVSGHHLFDGDGMVHAVKITNGDASYSCRFTETER 188
Query: 73 YIK-NHAARRIVVTGFGTRFVPDPCASIFQRIA-TLF-----KPGSDNTLVSVYPIQDQV 125
++ I G A + A LF K G+ + D++
Sbjct: 189 LVQEKQLGSPIFPKAIGELHGHSGIARLMLFYARGLFGLLNHKNGTGVANAGLVYFHDRL 248
Query: 126 YALGDSNYMHRI---DPATLDTLGKIDLAGDVT---ILHQTSHPLTTSDGETFNLGVTLR 179
A+ + + +++ D L+T+G+ D G ++ I H P+T E F L +
Sbjct: 249 LAMSEDDLPYQVRVTDNGDLETIGRFDFDGQLSSAMIAHPKIDPVTK---ELFALSYDVV 305
Query: 180 PTGPRYCILQLN-DAFSYPDLSHPPPPPPSLRFRDDIDMTS---------TIFHVLD--- 226
P + + + PD+ P P + D +T +F + D
Sbjct: 306 -KKPYLKYFKFSPEGEKSPDVEIPLASPTMMH---DFAITENFVVIPDQQVVFKLSDMFL 361
Query: 227 -----KTNGSVVHRF----------------QADSFFYLHIINAYEDTNDGIVVDICCYR 265
K +G + RF ++ F H+ NA+E VV I
Sbjct: 362 GKSPVKYDGEKISRFGILPRNAKDASEMVWVESPETFCFHLWNAWESPETDEVVVIGSCM 421
Query: 266 NPAMLDCMYREALKNIHSTPRYAQMFRARPLRFRLDLASPRTAPTGKVRPSVICDVGCET 325
PA D ++ E + ++S + L + ++ RT G V+ + E
Sbjct: 422 TPA--DSIFNECDEQLNS------VLSEIRLNLKTGKSTRRTIIPGSVQ------MNLEA 467
Query: 326 PRMNGQHQGRSYTYFYAISADIDRDNPGTLIKVNVQNNTCKS-WSQKDVYPSEPVFVATP 384
+N GR Y Y A+ G KV++ K+ + Y EP F+
Sbjct: 468 GMVNRNLLGRKTRYAYLAIAEPWPKVSG-FAKVDLSTGEVKNHFYGGKKYGGEPFFLPRG 526
Query: 385 -NARKEDEGVLLSVLLWSHHPTRVSLLVLNARTMQELGRVNFTTPTPVPKCLHGWY 439
+ ED+G ++S + L ++NA T++ V P+ VP HG +
Sbjct: 527 LESDGEDDGYIMS-FVHDEESWESELHIVNAVTLELEATVKL--PSRVPYGFHGTF 579
>sp|Q9LRM7|NCED6_ARATH 9-cis-epoxycarotenoid dioxygenase NCED6, chloroplastic
OS=Arabidopsis thaliana GN=NCED6 PE=2 SV=1
Length = 577
Score = 58.9 bits (141), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 112/489 (22%), Positives = 184/489 (37%), Gaps = 92/489 (18%)
Query: 9 PVQGTVE--GVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKIS-SGLVTYQC 65
PVQ +E G IPS + GV IRNG + HLFD G++H I V+Y C
Sbjct: 112 PVQNGLEVVGQIPSCLKGVYIRNGANPM-FPPLAGHHLFDGDGMIHAVSIGFDNQVSYSC 170
Query: 66 KFIKSESYIKNHAARRIVVTGFGTRFVPDPCASI-----FQRIATLFKPGSDNTLV---- 116
++ K+ ++ T G P P + R+A LF + LV
Sbjct: 171 RYTKTNRLVQE--------TALGRSVFPKPIGELHGHSGLARLA-LFTARAGIGLVDGTR 221
Query: 117 -------SVYPIQDQVYALGDSN--YMHRID-PATLDTLGK--IDLAGDVTILHQTSHPL 164
V ++ A+ + + Y +ID L+T+G+ D D +++
Sbjct: 222 GMGVANAGVVFFNGRLLAMSEDDLPYQVKIDGQGDLETIGRFGFDDQIDSSVIAHPKVDA 281
Query: 165 TTSDGETFNLGVTLRPTGPRY-----CILQLNDA---FSYPDLSHP----------PPPP 206
TT D T + V +P RY C + D P + H P
Sbjct: 282 TTGDLHTLSYNVLKKPH-LRYLKFNTCGKKTRDVEITLPEPTMIHDFAITENFVVIPDQQ 340
Query: 207 PSLRFRDDIDMTSTIFHVLDKT-----------NGSVVHRFQADSFFYLHIINAYED-TN 254
+ + I S + +V +K GS ++ F H+ NA+E+ T
Sbjct: 341 MVFKLSEMIRGGSPVIYVKEKMARFGVLSKQDLTGSDINWVDVPDCFCFHLWNAWEERTE 400
Query: 255 DG---IVVDICCYRNPAMLDCMYREALKNIHSTPRYAQMFRARPLRFRLDLASPRTAPTG 311
+G IVV C P D ++ E+ + R RL++ + +
Sbjct: 401 EGDPVIVVIGSCMSPP---DTIFSES----------GEPTRVELSEIRLNMRTKESN--- 444
Query: 312 KVRPSVICDVGCETPRMNGQHQGRSYTYFYAISADIDRDNPGTLIKVNVQNNTCKSWSQK 371
R ++ V E +N + GR + Y AD G + KV++QN T ++
Sbjct: 445 --RKVIVTGVNLEAGHINRSYVGRKSQFVYIAIADPWPKCSG-IAKVDIQNGTVSEFNYG 501
Query: 372 -DVYPSEPVFVATPNARKEDEGVLLSVLLWSHHPTRVSLLVLNARTMQELGRVNFTTPTP 430
+ EP FV +ED+G ++ + +V++A M+++ V P
Sbjct: 502 PSRFGGEPCFVPEGEG-EEDKGYVMG-FVRDEEKDESEFVVVDATDMKQVAAVRL--PER 557
Query: 431 VPKCLHGWY 439
VP HG +
Sbjct: 558 VPYGFHGTF 566
>sp|Q9M6E8|NCED1_PHAVU 9-cis-epoxycarotenoid dioxygenase NCED1, chloroplastic OS=Phaseolus
vulgaris GN=NCED1 PE=2 SV=1
Length = 615
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 100/473 (21%), Positives = 177/473 (37%), Gaps = 74/473 (15%)
Query: 14 VEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQCKFIKSESY 73
V G IP IDGV +RNG + H FD G++H K ++G +Y C+F +++
Sbjct: 160 VVGKIPKCIDGVYVRNGANPL-YEPVAGHHFFDGDGMVHAVKFTNGAASYACRFTETQRL 218
Query: 74 IKNHA-ARRIVVTGFG--------TRFVPDPCASIFQRIATLFKPGSDNTLVSVYPIQDQ 124
+ + R + G R + S+FQ + G N + +
Sbjct: 219 AQEKSLGRPVFPKAIGELHGHSGIARLLLFYARSLFQLVDGSHGMGVANAGLVYFNNHLL 278
Query: 125 VYALGDSNYMHRIDP-ATLDTLGKIDLAGDVT---ILHQTSHPLTTSDGETFNLGVTLRP 180
+ D Y RI L T+G+ D G + I H P+ D + V +P
Sbjct: 279 AMSEDDLPYHVRITSNGDLTTVGRYDFNGQLNSTMIAHPKLDPV-NGDLHALSYDVVQKP 337
Query: 181 TGPRYCILQLNDAFSYPDLSHPPPPPPSL-------------------RFRDDIDMTSTI 221
+ D PD+ P P + + + I S +
Sbjct: 338 YLKYFRFSA--DGVKSPDVEIPLKEPTMMHDFAITENFVVVPDQQVVFKLTEMITGGSPV 395
Query: 222 ---------FHVLDKT--NGSVVHRFQADSFFYLHIINAYEDTNDGIVVDICCYRNPAML 270
F +LDK + + + A F H+ NA+E+ +V I PA
Sbjct: 396 VYDKNKTSRFGILDKNAKDANAMRWIDAPECFCFHLWNAWEEPETDEIVVIGSCMTPA-- 453
Query: 271 DCMYREALKNIHSTPRYAQMFRARPLRFRLDLASPRTAPTGKVRPSVICD---VGCETPR 327
D ++ E +++ S RL+L + ++ R +I D V E
Sbjct: 454 DSIFNECDESLKSVLS----------EIRLNLRTGKS-----TRRPIISDAEQVNLEAGM 498
Query: 328 MNGQHQGRSYTYFYAISADIDRDNPGTLIKVNVQNNTCKSWS-QKDVYPSEPVFVATPNA 386
+N GR + Y A+ G KV++ + + + ++ + EP+F+ PN
Sbjct: 499 VNRNKLGRKTQFAYLALAEPWPKVSG-FAKVDLFSGEVQKYMYGEEKFGGEPLFL--PNG 555
Query: 387 RKEDEGVLLSVLLWSHHPTRVSLLVLNARTMQELGRVNFTTPTPVPKCLHGWY 439
+E +G +L+ + + L ++NA+ ++ + P+ VP HG +
Sbjct: 556 EEEGDGYILA-FVHDEKEWKSELQIVNAQNLKLEASIKL--PSRVPYGFHGTF 605
>sp|O49505|NCED2_ARATH 9-cis-epoxycarotenoid dioxygenase NCED2, chloroplastic
OS=Arabidopsis thaliana GN=NCED2 PE=2 SV=1
Length = 583
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 13 TVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQCKFIKSES 72
TVEG IP IDGV IRNG + HLFD G++H KI++G +Y C+F K+E
Sbjct: 123 TVEGTIPDCIDGVYIRNGANPM-FEPTAGHHLFDGDGMVHAVKITNGSASYACRFTKTER 181
Query: 73 YIKNHAARRIV 83
++ R V
Sbjct: 182 LVQEKRLGRPV 192
>sp|O65572|CCD1_ARATH Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=Arabidopsis
thaliana GN=CCD1 PE=1 SV=2
Length = 538
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 104/493 (21%), Positives = 176/493 (35%), Gaps = 90/493 (18%)
Query: 14 VEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQCKFIKSESY 73
V G +P ++G +R GP + H FD G++H +I G TY +++K+
Sbjct: 67 VHGFLPECLNGEFVRVGPNPKFDAVAGY-HWFDGDGMIHGVRIKDGKATYVSRYVKTSRL 125
Query: 74 IKNH--AARRIVVTG-----FGTRFVP-DPCASIFQRIATLFKPGSDNTLVSVYPIQDQV 125
+ A + + G FG V + + + + G+ NT + + +
Sbjct: 126 KQEEFFGAAKFMKIGDLKGFFGLLMVNVQQLRTKLKILDNTYGNGTANTALVYHHGKLLA 185
Query: 126 YALGDSNYMHRI-DPATLDTLGKIDLAGDVTILHQ-TSHP-LTTSDGETFNLGVTLRPTG 182
D Y+ ++ + L TLG ID D + H T+HP + GE F G + P
Sbjct: 186 LQEADKPYVIKVLEDGDLQTLGIIDY--DKRLTHSFTAHPKVDPVTGEMFTFGYSHTPPY 243
Query: 183 PRYCILQLNDAFSYPDLSHPPPP----PPSLRFRDDIDMTSTIFHVL------------- 225
Y ++ S + H P P P + I T IF L
Sbjct: 244 LTYRVI------SKDGIMHDPVPITISEPIMMHDFAITETYAIFMDLPMHFRPKEMVKEK 297
Query: 226 ---------DKTNGSVVHRFQADSF----------FYLHIINAYEDTNDGIVVDICCYRN 266
K V+ R+ D F H NA+E+ D +V+ C N
Sbjct: 298 KMIYSFDPTKKARFGVLPRYAKDELMIRWFELPNCFIFHNANAWEE-EDEVVLITCRLEN 356
Query: 267 P--AMLDCMYREALKNIHSTPRYAQMFRARPLRFRLDLASPRTAPTGKVRPSVICDVGCE 324
P M+ +E L+N + +RF + TG + +
Sbjct: 357 PDLDMVSGKVKEKLENFGN--------ELYEMRFNMK--------TGSASQKKLSASAVD 400
Query: 325 TPRMNGQHQGRSYTYFYAISADIDRDNPGTL-IKVNVQNNTCKSWSQ------------K 371
PR+N + G+ Y Y D G + ++ + T K + +
Sbjct: 401 FPRINECYTGKKQRYVYGTILDSIAKVTGIIKFDLHAEAETGKRMLEVGGNIKGIYDLGE 460
Query: 372 DVYPSEPVFVATPNARKEDEGVLLSVLLWSHHPTRVSLLVLNARTMQELGRVNFTTPTPV 431
Y SE ++V A +ED+G L+ + + + + V++A+TM P V
Sbjct: 461 GRYGSEAIYVPRETA-EEDDGYLI-FFVHDENTGKSCVTVIDAKTMSAEPVAVVELPHRV 518
Query: 432 PKCLHGWYFPHER 444
P H + E+
Sbjct: 519 PYGFHALFVTEEQ 531
>sp|Q84KG5|CCD_CROSA Carotenoid 9,10(9',10')-cleavage dioxygenase OS=Crocus sativus
GN=CCD PE=1 SV=1
Length = 546
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 105/492 (21%), Positives = 179/492 (36%), Gaps = 85/492 (17%)
Query: 14 VEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQCKFIKS--- 70
V G +P ++G +R GP + + H FD G++H +I G TY +++K+
Sbjct: 71 VRGHLPECLNGEFVRVGPNPKFMPVAGY-HWFDGDGMIHGMRIKDGKATYASRYVKTSRL 129
Query: 71 --ESYIKNHAARRIV-VTGFGTRFVPDP--CASIFQRIATLFKPGSDNTLVSVYPIQDQV 125
E Y + +I + GF F+ + + I + G+ NT + + +
Sbjct: 130 KQEEYFEGPKFMKIGDLKGFFGLFMVQMQLLRAKLKVIDVSYGVGTGNTALIYHHGKLLA 189
Query: 126 YALGDSNYMHRI-DPATLDTLGKIDLAGDVTILHQ-TSHP-LTTSDGETFNLGVTLRPTG 182
+ D Y+ ++ + L TLG +D D + H T+HP + E F G P
Sbjct: 190 LSEADKPYVVKVLEDGDLQTLGLLDY--DKRLSHSFTAHPKVDPFTDEMFTFGYAHTPPY 247
Query: 183 PRYCILQLNDAFSYPDLSHPPPPPPSLRFRD----------------------------- 213
Y ++ + P P P S+ D
Sbjct: 248 VTYRVISKDGVMRDP---VPITIPASVMMHDFAITENYSIFMDLPLYFQPKEMVKGGKLI 304
Query: 214 -DIDMTSTI-FHVLDK--TNGSVVHRFQADSFFYLHIINAYEDTNDGIVVDICCYRNP-- 267
D T F VL + + S++ F+ + F H NA+E+ D +V+ C NP
Sbjct: 305 FSFDATKKARFGVLPRYAKDDSLIRWFELPNCFIFHNANAWEE-GDEVVLITCRLENPDL 363
Query: 268 AMLDCMYREALKNIHSTPRYAQMFRARPLRFRLDLASPRTAPTGKVRPSVICDVGCETPR 327
M++ +E L+N F+ R ++ TG + + PR
Sbjct: 364 DMVNGAVKEKLEN----------FKNELYEMRFNMK------TGAASQKQLSVSAVDFPR 407
Query: 328 MNGQHQGRSYTYFYA------------ISADIDRDNPGTLIKVNVQNNTCKSWSQK-DVY 374
+N + R Y Y I D+ + K+ V N + Y
Sbjct: 408 INESYTTRKQRYVYGTILDNITKVKGIIKFDLHAEPEAGKKKLEVGGNVQGIFDLGPGRY 467
Query: 375 PSEPVFVATPNARK--EDEGVLLSVLLWSHHPTRVSLLVLNARTMQELGRVNFTTPTPVP 432
SE VFV K ED+G L+ + + + + V++A+TM P VP
Sbjct: 468 GSEAVFVPRERGIKSEEDDGYLI-FFVHDENTGKSEVNVIDAKTMSAEPVAVVELPNRVP 526
Query: 433 KCLHGWYFPHER 444
H ++ E+
Sbjct: 527 YGFHAFFVNEEQ 538
>sp|O49675|CCD4_ARATH Probable carotenoid cleavage dioxygenase 4, chloroplastic
OS=Arabidopsis thaliana GN=CCD4 PE=1 SV=1
Length = 595
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 114/492 (23%), Positives = 188/492 (38%), Gaps = 101/492 (20%)
Query: 14 VEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQCKFIKSESY 73
+ G +P ++G IRNGP + + HLFD G+LH KI +G T +++K+ Y
Sbjct: 130 IHGTLPLSLNGAYIRNGPNPQFLPRGPY-HLFDGDGMLHAIKIHNGKATLCSRYVKTYKY 188
Query: 74 -IKNHAARRI---VVTGFG--TRFVPDPCASIFQRIATLFKP----GSDNTLVSVYPIQD 123
++ + V +GF T V + + + + P G NT ++ + +
Sbjct: 189 NVEKQTGAPVMPNVFSGFNGVTASVARGALTAARVLTGQYNPVNGIGLANTSLAFF--SN 246
Query: 124 QVYALGDSN--YMHRI-DPATLDTLGKIDLAGDVTILHQTSHPLTTS-DGETFNLGVTLR 179
+++ALG+S+ Y R+ + ++T+G+ D G + + T+HP T GETF
Sbjct: 247 RLFALGESDLPYAVRLTESGDIETIGRYDFDGKLA-MSMTAHPKTDPITGETF--AFRYG 303
Query: 180 PTGPRYCILQLNDAFS----YPDLSHPPPPPPSLRFRDDIDMTS--TIF---------HV 224
P P + + A P S P F D +T IF ++
Sbjct: 304 PVPPFLTYFRFDSAGKKQRDVPIFSMTSP-----SFLHDFAITKRHAIFAEIQLGMRMNM 358
Query: 225 LD----------KTNG-----SVVHRFQADS----------FFYLHIINAYEDTNDGIVV 259
LD NG V+ ++ D F +H INA+++ + VV
Sbjct: 359 LDLVLEGGSPVGTDNGKTPRLGVIPKYAGDESEMKWFEVPGFNIIHAINAWDEDDGNSVV 418
Query: 260 DICCYRNPAMLDCMYREALKNIHSTPRYAQMFRARPLRFRLDLASPRTAPTGKVRPSVIC 319
I + +I T + A + ++DL TG VR I
Sbjct: 419 LIA-------------PNIMSIEHTLERMDLVHALVEKVKIDLV------TGIVRRHPIS 459
Query: 320 DVGCETPRMNGQHQGRSYTYFYAISADIDRDNPGTLIKVNVQNN------TCKSWSQKDV 373
+ +N GR Y YA D G ++K++V +
Sbjct: 460 ARNLDFAVINPAFLGRCSRYVYAAIGDPMPKISG-VVKLDVSKGDRDDCTVARRMYGSGC 518
Query: 374 YPSEPVFVA----TPNARKEDEGVLLSVLLWSHHPT--RVSLLVLNARTMQELGRVNFTT 427
Y EP FVA P A +ED+G V+ + H LV++A++ +
Sbjct: 519 YGGEPFFVARDPGNPEA-EEDDGY---VVTYVHDEVTGESKFLVMDAKSPELEIVAAVRL 574
Query: 428 PTPVPKCLHGWY 439
P VP HG +
Sbjct: 575 PRRVPYGFHGLF 586
>sp|Q94IR2|CCD1_PHAVU Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=Phaseolus
vulgaris GN=CCD1 PE=1 SV=1
Length = 543
Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 104/496 (20%), Positives = 178/496 (35%), Gaps = 93/496 (18%)
Query: 14 VEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQCKFI----- 68
V+G +P ++G +R GP + H FD G++H +I G TY +F+
Sbjct: 69 VKGHLPDCLNGEFVRVGPNPKFAPVAGY-HWFDGDGMIHGLRIKDGKATYVSRFVETSRL 127
Query: 69 KSESYIKNHAARRI--VVTGFGTRFVPDPCASIFQRIATLFKPGSDNTLVSVYPIQDQVY 126
K E Y +I + FG V ++ L G VY ++
Sbjct: 128 KQEEYFGRSKFMKIGDLKGLFGLLMVNIHMLRTKLKVLDLSYGGGTTNTALVYH-HGKLL 186
Query: 127 ALGDSNYMHRI---DPATLDTLGKIDLAGDVTILHQ-TSHP-LTTSDGETFNLGVTLRPT 181
AL +++ + I + L TLG +D D + H T+HP + GE F+ G P
Sbjct: 187 ALSEADKPYAIKVFEDGDLQTLGMLDY--DKRLGHSFTAHPKVDPFTGEMFSFGYAHTPP 244
Query: 182 GPRYCILQLNDAFSYPDLSHPPPP------------------------PPSLRFRDDIDM 217
Y ++ D + H P P P R ++ +
Sbjct: 245 YITYRVIS-KDGY-----MHDPVPITISDPIMMHDFAITENYAVFMDLPLIFRPKEMVKN 298
Query: 218 TSTIFHV--LDKTNGSVVHRFQAD----------SFFYLHIINAYEDTNDGIVVDICCYR 265
+ IF K V+ R+ D + F H NA+E+ D +V+ C +
Sbjct: 299 KTLIFSFDSTKKARFGVLPRYAKDEQHIRWFELPNCFIFHNANAWEE-EDEVVLITCRLQ 357
Query: 266 NPAM--LDCMYREALKNIHSTPRYAQMFRARPLRFRLDLASPRTAPTGKVRPSVICDVGC 323
NP + + +E L+N S Y F + TG+ +
Sbjct: 358 NPKLDNVGGTVQEKLENF-SNELYEMRFNMK---------------TGEASQKKLSASTV 401
Query: 324 ETPRMNGQHQGRSYTYFYAISADIDRDNPGTLIKVNVQNNTCKSWSQKDV---------- 373
+ PR+N + GR Y Y + D G +IK ++ + +V
Sbjct: 402 DFPRVNENYTGRKQRYVYGTTLDSIAKVTG-IIKFDLHAEPDHGKEKLEVGGNVQGLYDL 460
Query: 374 ----YPSEPVFV-ATPNARKEDEGVLLSVLLWSHHPTRVSLLVLNARTMQELGRVNFTTP 428
+ SE V++ P E++ L + + + + + V++A+TM P
Sbjct: 461 GPGKFGSEAVYIPRVPGIESEEDDGYLVLFVHDENAGKSFVHVIDAKTMSADPVAVVELP 520
Query: 429 TPVPKCLHGWYFPHER 444
VP H ++ E+
Sbjct: 521 NRVPYGFHAFFVTEEQ 536
>sp|Q8LP17|CCD1_PEA Carotenoid 9,10(9',10')-cleavage dioxygenase 1 OS=Pisum sativum
GN=CCD1 PE=2 SV=1
Length = 541
Score = 53.1 bits (126), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 105/486 (21%), Positives = 179/486 (36%), Gaps = 81/486 (16%)
Query: 13 TVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQCKFIKS-- 70
TV+G +P ++G +R GP + H FD G++H +I G +Y +F+K+
Sbjct: 66 TVQGHLPDCLNGEFVRVGPNPKFSPVAGY-HWFDGDGMIHGLRIKDGKASYVSRFVKTSR 124
Query: 71 ---ESYIKNHAARRI--VVTGFGTRFVPDPCASIFQRIATL-FKPGSDNTLVSVYPIQDQ 124
E Y +I + FG V +I + + G+ NT + + +
Sbjct: 125 FKQEEYFNGSKFMKIGDLKGLFGLLMVNMQMLRAKLKILDVSYGHGTANTALVYHHQKLL 184
Query: 125 VYALGDSNYMHRI-DPATLDTLGKIDLAGDVTILHQ-TSHP-LTTSDGETFNLGVTLRPT 181
+ GD Y ++ + L TLG +D D + H T+HP + GE F G +
Sbjct: 185 ALSEGDKPYAIKVFEDGDLQTLGMLDY--DKRLGHNFTAHPKVDPFTGEMFTFGYSHTAP 242
Query: 182 GPRYCILQLNDAF---------SYPDLSHPPPPPPS--------LRFR-DDIDMTSTIFH 223
Y ++ D F S P + H + L FR ++ T+
Sbjct: 243 YVTYRVIS-KDGFMQDPVPITISDPVMMHDFAITENYSIFMDLPLYFRPKEMVKNKTLIF 301
Query: 224 VLDKTNGS---VVHRFQAD----------SFFYLHIINAYEDTNDGIVVDICCYRNPAM- 269
D T + V+ R+ D + F H NA+E+ D IV+ C NP +
Sbjct: 302 SFDSTKKARFGVLPRYAKDDKHIRWFELPNCFIFHNANAWEE-EDEIVLITCRLENPNLD 360
Query: 270 -LDCMYREALKNIHSTPRYAQMFRARPLRFRLDLASPRTAPTGKVRPSVICDVGCETPRM 328
+ +E L N S Y F + TG+ + + PR+
Sbjct: 361 VVGGAVKEKLDNF-SNELYEMRFNMK---------------TGEASQKKLSASTVDFPRV 404
Query: 329 NGQHQGRSYTYFYAISADIDRDNPGTLIKVNVQNNTCKSWSQKDV--------------Y 374
N + GR Y Y + D G +IK ++ ++ +V +
Sbjct: 405 NESYTGRKQRYVYGTTLDSIAKVTG-IIKFDLHAEPDSGKTKLEVGGNVQGLYDLGPGRF 463
Query: 375 PSEPVFV-ATPNARKEDEGVLLSVLLWSHHPTRVSLLVLNARTMQELGRVNFTTPTPVPK 433
SE V+V P E++ L + + + + V++A+ M P VP
Sbjct: 464 GSEAVYVPRVPGTDSEEDDGYLIFFVHDENTGKSFVHVIDAKRMSAEPVAVVELPQRVPY 523
Query: 434 CLHGWY 439
H ++
Sbjct: 524 GFHAFF 529
>sp|O06785|CCO_MYCTU Carotenoid cleavage oxygenase OS=Mycobacterium tuberculosis
GN=Rv0654 PE=1 SV=1
Length = 501
Score = 49.7 bits (117), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 91/227 (40%), Gaps = 47/227 (20%)
Query: 233 VHRFQADSFFYLHIINAYEDTNDGIVVDICCYRNPAMLDCMYREALKNIHSTPRYAQMFR 292
V F + + H +NAY + +G V + LD + RY++MF
Sbjct: 302 VRWFDIEPCYVYHPLNAYSECRNGAEVLV--------LDVV------------RYSRMFD 341
Query: 293 ---------ARPL--RFRLDLASPRTAPTGKVRPSVICDVGCETPRMNGQHQGRSYTYFY 341
+RP R+ ++LA TG V D E PR+N G + + Y
Sbjct: 342 RDRRGPGGDSRPSLDRWTINLA------TGAVTAECRDDRAQEFPRINETLVGGPHRFAY 395
Query: 342 AISADID-RDNPGTLIKVNVQNNTCKSWSQK------DVYPSEPVFVATPNARKEDEGVL 394
+ + G + + C + S D+ E VFV P+AR ED+G+L
Sbjct: 396 TVGIEGGFLVGAGAALSTPLYKQDCVTGSSTVASLDPDLLIGEMVFVPNPSARAEDDGIL 455
Query: 395 LSVLLWSHHPTRVSLLVLNARTMQELGRVNFTTPTPVPKCLHGWYFP 441
+ W LL+L+A+T++ + V+ P VP HG + P
Sbjct: 456 MG-YGWHRGRDEGQLLLLDAQTLESIATVHL--PQRVPMGFHGNWAP 499
>sp|Q53353|LSDX1_PSEPA Lignostilbene-alpha,beta-dioxygenase isozyme I OS=Pseudomonas
paucimobilis PE=1 SV=1
Length = 485
Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 90/468 (19%), Positives = 180/468 (38%), Gaps = 66/468 (14%)
Query: 14 VEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQCKFIKSESY 73
+EG +P ++G R P + D F+ G++ F+ G + ++ ++ +++ +
Sbjct: 28 IEGEVPPQLNGTFHRVHPDAQFPPRFEDDQFFNGDGMVSLFRFHDGKIDFRQRYAQTDKW 87
Query: 74 IKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFKPGSDNTLVSVYPIQDQVYALGDSNY 133
A + + + D R G+ NT V V+ ++YA+ + +
Sbjct: 88 KVERKAGKSLFGAYRNPLTDDASVQGMIR-------GTANTNVMVH--AGKLYAMKEDSP 138
Query: 134 MHRIDPATLDTLGKIDLAGDVTILHQTSHPL---TTSDGETFNLG-----------VTLR 179
+DP TL+T G + G + +HP T + F G + +
Sbjct: 139 CLIMDPLTLETEGYTNFDGKLQSQTFCAHPKIDPVTGNLCAFAYGAKGLMTLDMAYIEIS 198
Query: 180 PTG----------PRYCILQ---LNDAFS----YPDLSHPPPPPPSLRFRDDIDMTSTIF 222
PTG P YC++ + + ++ P LS L F D T +
Sbjct: 199 PTGKLLKEIPFQNPYYCMMHDFGVTEDYAVFAVMPLLSSWDRLEQRLPFF-GFDTTLPCY 257
Query: 223 HVLDKTNGSV--VHRFQADSFFYLHIINAYEDTNDGIVVDICCYRNPAMLDCMYREALKN 280
+ NG + F+ + F H++NA+ D + +D+ RN + +
Sbjct: 258 LGILPRNGDARDLRWFKTGNCFVGHVMNAFNDGTK-VHIDMPVSRNNSF-------PFFD 309
Query: 281 IHSTPRYAQMFRARPLRFRLDLASPRTAPTGKVRPSVICDVGCETPRMNGQHQGRSYTYF 340
+H P + R+ +D+AS + R + D E PR++ ++ R+Y +
Sbjct: 310 VHGAPFDPVAGQGFLTRWTVDMASNGDSFEKTER---LFDRPDEFPRIDERYATRAYRHG 366
Query: 341 YAISADIDR--DNPG--------TLIKVNVQNNTCKS-WSQKDVYPSEPVFVATPNARKE 389
+ + D ++ + PG TL +++ S W+ EP F+ E
Sbjct: 367 WMLILDTEKPYEAPGGAFYALTNTLGHIDLATGKSSSWWAGPRCAIQEPCFIPRSPDAPE 426
Query: 390 DEGVLLSVLLWSHHPTRVSLLVLNARTMQELGRVNFTTPTPVPKCLHG 437
+G +++ L+ H L + +A+ + + P + + LHG
Sbjct: 427 GDGYVIA-LVDDHVANYSDLAIFDAQHVDQGPIARAKLPVRIRQGLHG 473
>sp|Q9M9F5|NCED9_ARATH 9-cis-epoxycarotenoid dioxygenase NCED9, chloroplastic
OS=Arabidopsis thaliana GN=NCED9 PE=2 SV=1
Length = 657
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 14 VEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQCKFIKSESY 73
V G +P I GV +RNG + S HLFD G++H + +G V+Y C+F ++
Sbjct: 201 VTGTVPECIQGVYVRNGANPLH-KPVSGHHLFDGDGMVHAVRFDNGSVSYACRFTETNRL 259
Query: 74 IKNHAARRIV 83
++ R V
Sbjct: 260 VQERECGRPV 269
>sp|Q9LRR7|NCED3_ARATH 9-cis-epoxycarotenoid dioxygenase NCED3, chloroplastic
OS=Arabidopsis thaliana GN=NCED3 PE=2 SV=1
Length = 599
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 100/483 (20%), Positives = 175/483 (36%), Gaps = 76/483 (15%)
Query: 7 DQPVQGT--VEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQ 64
+QPV+ V G +P I GV +RNG + + H FD G++H K G +Y
Sbjct: 132 EQPVRRNLPVVGKLPDSIKGVYVRNGANPLH-EPVTGHHFFDGDGMVHAVKFEHGSASYA 190
Query: 65 CKFIKSESYIKN-HAARRIVVTGFGTRFVPDPCASIF----QRIATLFKP--GSDNTLVS 117
C+F ++ +++ R + G A + + A + P G+
Sbjct: 191 CRFTQTNRFVQERQLGRPVFPKAIGELHGHTGIARLMLFYARAAAGIVDPAHGTGVANAG 250
Query: 118 VYPIQDQVYALGDSN--YMHRIDP-ATLDTLGKIDLAGDVTILHQTSHPLTTSDGETFNL 174
+ ++ A+ + + Y +I P L T+G+ D G + + GE F L
Sbjct: 251 LVYFNGRLLAMSEDDLPYQVQITPNGDLKTVGRFDFDGQLESTMIAHPKVDPESGELFAL 310
Query: 175 G-----------VTLRPTGPRYCILQLNDAFSYPDLSHP----------PPPPPSLRFRD 213
P G + +++ P + H P + +
Sbjct: 311 SYDVVSKPYLKYFRFSPDGTKSPDVEIQ--LDQPTMMHDFAITENFVVVPDQQVVFKLPE 368
Query: 214 DIDMTSTI---------FHVLDK--TNGSVVHRFQADSFFYLHIINAYED-TNDGIVVDI 261
I S + F +LDK + S + A F H+ NA+E+ D +VV
Sbjct: 369 MIRGGSPVVYDKNKVARFGILDKYAEDSSNIKWIDAPDCFCFHLWNAWEEPETDEVVVIG 428
Query: 262 CCYRNPAMLDCMYREALKNIHSTPRYAQMFRARPLRFRLDLASPRTAPTGKVRPSVICD- 320
C P D ++ E+ +N+ S RL+L + + R +I +
Sbjct: 429 SCMTPP---DSIFNESDENLKSVLS----------EIRLNLKTGES-----TRRPIISNE 470
Query: 321 ---VGCETPRMNGQHQGRSYTYFYAISADIDRDNPGTLIKVNVQNNTCKSWSQKD-VYPS 376
V E +N GR + Y A+ G KV++ K D Y
Sbjct: 471 DQQVNLEAGMVNRNMLGRKTKFAYLALAEPWPKVSG-FAKVDLTTGEVKKHLYGDNRYGG 529
Query: 377 EPVFVATPNARKEDEGVLLSVLLWSHHPTRVSLLVLNARTMQELGRVNFTTPTPVPKCLH 436
EP+F+ P E++ + + + L ++NA +++ V P+ VP H
Sbjct: 530 EPLFL--PGEGGEEDEGYILCFVHDEKTWKSELQIVNAVSLEVEATVKL--PSRVPYGFH 585
Query: 437 GWY 439
G +
Sbjct: 586 GTF 588
>sp|Q52008|LSDX3_PSEPA Lignostilbene-alpha,beta-dioxygenase isozyme III OS=Pseudomonas
paucimobilis GN=lsdB PE=1 SV=1
Length = 490
Score = 42.4 bits (98), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 98/474 (20%), Positives = 186/474 (39%), Gaps = 73/474 (15%)
Query: 14 VEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQCKFIKSESY 73
VEG IP+ +DG R P + D F+ G++ F+ G + ++ ++ +++ +
Sbjct: 28 VEGEIPAQLDGTFHRVHPDAQFPPRFEDDQFFNGDGMVSLFRFHDGKIDFRQRYAQTDKW 87
Query: 74 IKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFKPGSDNTLVSVYPIQDQVYALGDSNY 133
A + + + D R G+ NT V V+ ++YA+ + +
Sbjct: 88 KVERKAGKSLFGAYRNPLTDDASVQGMIR-------GTANTNVMVH--AGKLYAMKEDSP 138
Query: 134 MHRIDPATLDTLGKIDLAGDVTILHQTSHP------------------LTTSDGETF--- 172
+DP TL+T G + G + ++H L T+D F
Sbjct: 139 CLIMDPLTLETEGYTNFDGKLKNQTFSAHAKIDPVTGNFCNFGYAATGLLTTDCSYFEID 198
Query: 173 ---NLGVTLRPTGPRYCILQLNDAFSYPDLSHPPPPPPSL-RFRDDI-----DMTSTIF- 222
NL P YC++ + + H P P+ R + + D T ++
Sbjct: 199 PAGNLLFETEFQVPYYCMMHDYGLTEHYAIFHIVPCSPNWDRLKAGLPHFGFDTTLPVWL 258
Query: 223 HVLDKTNGSV---VHRFQA-DSFFYLHIINAYEDTNDGIVVDICCYRNPAMLDCMYREAL 278
V+ + G V F+A + F H++NA+E+ + I D N A
Sbjct: 259 GVVPRGPGVTNKDVRWFKAPKTIFASHVMNAFEEGSK-IHFDTPQAENNAF------PFF 311
Query: 279 KNIHSTPRYAQMFRARPLRFRLDLASPRTAPTGKVRPSVICDVGCETPRMNGQHQGRSYT 338
+IH P R R+ +DL S + +VR + E PR++ ++ G+ Y
Sbjct: 312 PDIHGAPFDPVAARPYLHRWTVDLGS-NSEDFAEVRQ--LTSWIDEFPRVDARYVGQPYR 368
Query: 339 YFYAISADIDRD-----NPGTLIKVNVQNNTCKSWSQKDVY-------PSEPVFVATPNA 386
+ + + D + + + K+N + + ++D + EP FV
Sbjct: 369 HGWGLVMDPEMEMEFARGRASGFKMNRIGHWDHATGKEDSWWCGPQSIIQEPCFVPRMAD 428
Query: 387 RKEDEGVLLSVLLWSHHPTRVS-LLVLNARTMQE--LGRVNFTTPTPVPKCLHG 437
E +G +++++ + T S L+VL+A +++ +GR P + LHG
Sbjct: 429 SAEGDGYIIALV--DNLITNYSDLVVLDALNLKDGPIGRAKL--PIRLRSGLHG 478
>sp|Q5LNK3|ACPS_RUEPO Holo-[acyl-carrier-protein] synthase OS=Ruegeria pomeroyi (strain
ATCC 700808 / DSM 15171 / DSS-3) GN=acpS PE=3 SV=1
Length = 148
Score = 33.5 bits (75), Expect = 3.2, Method: Composition-based stats.
Identities = 30/125 (24%), Positives = 45/125 (36%), Gaps = 21/125 (16%)
Query: 327 RMNGQHQGRSYTYFYAISADIDRDNPGTLIKVNVQNNTCK-----------SWSQ---KD 372
R + + R +T A+ D GT K C SW +
Sbjct: 21 RFGDRFRNRVFTEIEQRKAERRSDTAGTYAKRWAAKEACSKALGTGLRMGISWKDMAVSN 80
Query: 373 VYPSEPVFVATPNARK-------EDEGVLLSVLLWSHHPTRVSLLVLNARTMQELGRVNF 425
+ +PV T A + E ++ V L HP + +V+ AR + E+G VN
Sbjct: 81 LRSGQPVMQVTGWAAERLREMTPEGYEAIIHVTLTDDHPWAQAFVVIEARPLAEVGEVNL 140
Query: 426 TTPTP 430
T P P
Sbjct: 141 TYPAP 145
>sp|Q3ILA5|UBIG_PSEHT 3-demethylubiquinone-9 3-methyltransferase OS=Pseudoalteromonas
haloplanktis (strain TAC 125) GN=ubiG PE=3 SV=1
Length = 236
Score = 33.5 bits (75), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Query: 55 KISSGLVTYQCKFIK--SESYIKNHAARRIVVTGFGT-RFVPDPCASIFQRIATLFKPGS 111
K+ S ++IK +E Y H AR VVT VPDP ASI +A L KPG+
Sbjct: 90 KLHSLETGVNVEYIKVPAEQYASEHPARFDVVTCMEMLEHVPDP-ASIIHAVAELAKPGA 148
Query: 112 D 112
D
Sbjct: 149 D 149
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.138 0.435
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 185,638,812
Number of Sequences: 539616
Number of extensions: 8204158
Number of successful extensions: 23492
Number of sequences better than 100.0: 40
Number of HSP's better than 100.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 23365
Number of HSP's gapped (non-prelim): 75
length of query: 447
length of database: 191,569,459
effective HSP length: 121
effective length of query: 326
effective length of database: 126,275,923
effective search space: 41165950898
effective search space used: 41165950898
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)