Your job contains 1 sequence.
>psy14636
QDNSEVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGL
VTYQCKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFKPGSDNTLVSVYP
IQDQVYALGDSNYMHRIDPATLDTLGKIDLAGDVTILHQTSHPLTTSDGETFNLGVTLRP
TGPRYCILQLNDAFSYPDLSHPPPPPPSLRFRDDIDMTSTIFHVLDKTNGSVVHRFQADS
FFYLHIINAYEDTNDGIVVDICCYRNPAMLDCMYREALKNIHSTPRYAQMFRARPLRFRL
DLASPRTAPTGKVRPSVICDVGCETPRMNGQHQGRSYTYFYAISADIDRDNPGTLIKVNV
QNNTCKSWSQKDVYPSEPVFVATPNARKEDEGVLLSVLLWSHHPTRVSLLVLNARTMQEL
GRVNFTTPTPVPKCLHGWYFPHERKDA
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy14636
(447 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0002937 - symbol:ninaB "neither inactivation nor a... 509 5.1e-114 3
UNIPROTKB|E1C8E0 - symbol:BCO2 "Uncharacterized protein" ... 401 8.3e-68 3
ZFIN|ZDB-GENE-060421-7448 - symbol:bco2b "beta-carotene o... 398 7.9e-64 3
ZFIN|ZDB-GENE-081104-505 - symbol:rpe65c "retinal pigment... 404 2.6e-63 3
ZFIN|ZDB-GENE-010509-1 - symbol:bco2l "beta-carotene 15, ... 377 3.6e-63 3
MGI|MGI:2177469 - symbol:Bco2 "beta-carotene oxygenase 2"... 356 1.7e-62 3
ZFIN|ZDB-GENE-050410-16 - symbol:rpe65b "retinal pigment ... 392 4.8e-62 3
UNIPROTKB|F1PXT9 - symbol:RPE65 "Retinoid isomerohydrolas... 385 7.7e-62 3
UNIPROTKB|Q9TVB8 - symbol:RPE65 "Retinoid isomerohydrolas... 385 9.8e-62 3
MGI|MGI:98001 - symbol:Rpe65 "retinal pigment epithelium ... 389 1.3e-61 3
UNIPROTKB|F1S830 - symbol:RPE65 "Uncharacterized protein"... 384 1.6e-61 3
UNIPROTKB|Q9YGX2 - symbol:RPE65 "Retinoid isomerohydrolas... 390 2.6e-61 3
RGD|621396 - symbol:Rpe65 "retinal pigment epithelium 65"... 385 2.6e-61 3
UNIPROTKB|Q8HXG8 - symbol:BCO2 "Beta,beta-carotene 9',10'... 343 3.6e-61 3
UNIPROTKB|E2RS36 - symbol:BCO2 "Uncharacterized protein" ... 359 5.2e-61 3
UNIPROTKB|Q16518 - symbol:RPE65 "Retinoid isomerohydrolas... 385 6.8e-61 3
MGI|MGI:1926923 - symbol:Bcmo1 "beta-carotene 15,15'-mono... 377 1.7e-60 3
UNIPROTKB|Q28175 - symbol:RPE65 "Retinoid isomerohydrolas... 383 1.8e-60 3
ZFIN|ZDB-GENE-040426-1717 - symbol:rpe65a "retinal pigmen... 391 3.7e-60 3
UNIPROTKB|F1SM94 - symbol:BCO2 "Uncharacterized protein" ... 340 3.8e-60 3
RGD|70981 - symbol:Bcmo1 "beta-carotene 15,15'-monooxygen... 362 1.5e-59 3
UNIPROTKB|Q91XT5 - symbol:Bcmo1 "Beta,beta-carotene 15,15... 362 1.5e-59 3
UNIPROTKB|Q9BYV7 - symbol:BCO2 "Beta,beta-carotene 9',10'... 345 1.0e-58 3
UNIPROTKB|F1N2Z9 - symbol:BCO2 "Uncharacterized protein" ... 350 9.7e-58 3
UNIPROTKB|Q9HAY6 - symbol:BCMO1 "Beta,beta-carotene 15,15... 359 2.0e-57 3
UNIPROTKB|Q9I993 - symbol:BCMO1 "Beta,beta-carotene 15,15... 364 2.9e-56 2
ZFIN|ZDB-GENE-040426-1191 - symbol:bcmo1b "beta-carotene ... 392 6.9e-55 2
UNIPROTKB|F1N3B7 - symbol:BCMO1 "Uncharacterized protein"... 359 8.7e-54 3
ZFIN|ZDB-GENE-010508-1 - symbol:bcmo1a "beta-carotene 15,... 343 1.4e-53 2
WB|WBGene00018755 - symbol:bcmo-2 species:6239 "Caenorhab... 326 4.1e-47 3
RGD|1309022 - symbol:Bco2 "beta-carotene oxygenase 2" spe... 306 3.2e-46 3
RGD|1597300 - symbol:Tex12 "testis expressed 12" species:... 306 3.2e-46 3
UNIPROTKB|E9PJJ1 - symbol:BCO2 "Beta,beta-carotene 9',10'... 257 1.4e-43 3
WB|WBGene00012914 - symbol:bcmo-1 species:6239 "Caenorhab... 315 3.3e-40 3
UNIPROTKB|F1P321 - symbol:RPE65 "Retinoid isomerohydrolas... 230 1.4e-36 3
UNIPROTKB|F1NE28 - symbol:RPE65 "Retinoid isomerohydrolas... 230 1.7e-36 3
TAIR|locus:2134093 - symbol:CCD8 "carotenoid cleavage dio... 241 1.3e-32 2
UNIPROTKB|Q83CU2 - symbol:CBU_1011 "Lignostilbene-alpha,b... 274 1.3e-30 2
TIGR_CMR|CBU_1011 - symbol:CBU_1011 "dioxygenase, putativ... 274 1.3e-30 2
ASPGD|ASPL0000049803 - symbol:AN1704 species:162425 "Emer... 141 1.0e-18 3
UNIPROTKB|Q746V1 - symbol:GSU3417 "Dioxygenase, putative"... 165 2.4e-16 2
TIGR_CMR|GSU_3417 - symbol:GSU_3417 "dioxygenase, putativ... 165 2.4e-16 2
UNIPROTKB|I3LRK8 - symbol:BCMO1 "Uncharacterized protein"... 200 2.4e-15 1
UNIPROTKB|G4MX63 - symbol:MGG_08016 "Retinal pigment epit... 131 7.1e-15 3
TAIR|locus:2134796 - symbol:NCED4 "nine-cis-epoxycaroteno... 156 9.8e-10 2
TAIR|locus:2202492 - symbol:NCED5 "nine-cis-epoxycaroteno... 138 1.0e-09 2
TAIR|locus:2124489 - symbol:NCED2 "nine-cis-epoxycaroteno... 137 1.8e-08 2
TAIR|locus:2093751 - symbol:NCED6 "nine-cis-epoxycaroteno... 105 3.6e-08 2
TAIR|locus:2087418 - symbol:CCD1 "carotenoid cleavage dio... 118 3.9e-08 2
TAIR|locus:2091652 - symbol:NCED3 "nine-cis-epoxycaroteno... 114 7.5e-07 2
TAIR|locus:2032085 - symbol:NCED9 "nine-cis-epoxycaroteno... 110 1.3e-06 2
UNIPROTKB|O06785 - symbol:MT0683 "Carotenoid cleavage oxy... 116 9.7e-06 3
ASPGD|ASPL0000046682 - symbol:AN1643 species:162425 "Emer... 104 1.7e-05 3
UNIPROTKB|Q2KEQ1 - symbol:MGCH7_ch7g985 "Putative unchara... 96 4.4e-05 3
UNIPROTKB|Q7XU29 - symbol:OSJNBb0034G17.9 "OSJNBb0034G17.... 91 0.00031 2
UNIPROTKB|Q53353 - symbol:Q53353 "Lignostilbene-alpha,bet... 89 0.00093 2
>FB|FBgn0002937 [details] [associations]
symbol:ninaB "neither inactivation nor afterpotential B"
species:7227 "Drosophila melanogaster" [GO:0007604
"phototransduction, UV" evidence=IMP] [GO:0016063 "rhodopsin
biosynthetic process" evidence=IDA;IMP] [GO:0007603
"phototransduction, visible light" evidence=IMP] [GO:0007602
"phototransduction" evidence=TAS] [GO:0003834 "beta-carotene
15,15'-monooxygenase activity" evidence=IMP;IDA;NAS] [GO:0016119
"carotene metabolic process" evidence=IDA] [GO:0035238 "vitamin A
biosynthetic process" evidence=IMP;IDA] [GO:0009110 "vitamin
biosynthetic process" evidence=IMP] [GO:0010436 "carotenoid
dioxygenase activity" evidence=IDA] [GO:0042574 "retinal metabolic
process" evidence=IDA] [GO:0004744 "retinal isomerase activity"
evidence=IDA] GO:GO:0042574 GO:GO:0007602 eggNOG:COG3670
GO:GO:0003834 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
GO:GO:0035238 GO:GO:0016119 GO:GO:0010436 GO:GO:0016063
GO:GO:0004744 EMBL:AB041507 ProteinModelPortal:Q9NKW9 SMR:Q9NKW9
STRING:Q9NKW9 PRIDE:Q9NKW9 FlyBase:FBgn0002937 InParanoid:Q9NKW9
OrthoDB:EOG4TTF03 ArrayExpress:Q9NKW9 Bgee:Q9NKW9 Uniprot:Q9NKW9
Length = 620
Score = 509 (184.2 bits), Expect = 5.1e-114, Sum P(3) = 5.1e-114
Identities = 95/186 (51%), Positives = 126/186 (67%)
Query: 5 EVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQ 64
E+ P++G G IP WI G L+RNGPGSW VG+ +F HLFDCS LLHRF I +G VTYQ
Sbjct: 52 EIVDPIEGHHSGHIPKWICGSLLRNGPGSWKVGDMTFGHLFDCSALLHRFAIRNGRVTYQ 111
Query: 65 CKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFKP--GSDNTLVSVYPIQ 122
+F+ +E+ KN +A+RIVVT FGT VPDPC SIF R A +F+P G+DN+++S+YP
Sbjct: 112 NRFVDTETLRKNRSAQRIVVTEFGTAAVPDPCHSIFDRFAAIFRPDSGTDNSMISIYPFG 171
Query: 123 DQVYALGDSNYMHRIDPATLDTLGKIDLAGDVTILHQTSHPLTTSDGETFNLGVTLRPTG 182
DQ Y ++ +MHRI+P TL T +I V +++ TSHP G +NLG T+ +G
Sbjct: 172 DQYYTFTETPFMHRINPCTLATEARICTTDFVGVVNHTSHPHVLPSGTVYNLGTTMTRSG 231
Query: 183 PRYCIL 188
P Y IL
Sbjct: 232 PAYTIL 237
Score = 392 (143.0 bits), Expect = 5.1e-114, Sum P(3) = 5.1e-114
Identities = 71/133 (53%), Positives = 102/133 (76%)
Query: 312 KVRPSVICDVGCETPRMNGQ-HQGRSYTYFYAISADIDRDNPGTLIKVNVQNNTCKSWSQ 370
++RP ++CD GCETPR+ + + G++Y YFYAIS+D+D NPGTLIKV+V N +C +W +
Sbjct: 486 QLRPEMLCDWGCETPRIYYERYMGKNYRYFYAISSDVDAVNPGTLIKVDVWNKSCLTWCE 545
Query: 371 KDVYPSEPVFVATPNARKEDEGVLL-SVLLWSHHPTRVSLLVLNARTMQELGRVNFTTPT 429
++VYPSEP+FV +P+ + ED+GV+L S++L + V L+VL A+TM ELGR +F T
Sbjct: 546 ENVYPSEPIFVPSPDPKSEDDGVILASMVLGGLNDRYVGLIVLCAKTMTELGRCDFHTNG 605
Query: 430 PVPKCLHGWYFPH 442
PVPKCLHGW+ P+
Sbjct: 606 PVPKCLHGWFAPN 618
Score = 258 (95.9 bits), Expect = 5.1e-114, Sum P(3) = 5.1e-114
Identities = 47/94 (50%), Positives = 67/94 (71%)
Query: 220 TIFHVLDKTNGSVVHRFQADSFFYLHIINAYEDTNDG-IVVDICCYRNPAMLDCMYREAL 278
T+FH++D+ +G +V +++++FFYLHIIN +E DG +VVDIC YRNP M++CMY EA+
Sbjct: 312 TLFHLIDRVSGKLVQTYESEAFFYLHIINCFE--RDGHVVVDICSYRNPEMINCMYLEAI 369
Query: 279 KNIHSTPRYAQMFRARPLRFRLDLASPRTAPTGK 312
N+ + P YA +FR RPLRF L L + A K
Sbjct: 370 ANMQTNPNYATLFRGRPLRFVLPLGTIPPASIAK 403
>UNIPROTKB|E1C8E0 [details] [associations]
symbol:BCO2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0016116
"carotenoid metabolic process" evidence=IEA] [GO:0016121 "carotene
catabolic process" evidence=IEA] [GO:0016702 "oxidoreductase
activity, acting on single donors with incorporation of molecular
oxygen, incorporation of two atoms of oxygen" evidence=IEA]
[GO:0051881 "regulation of mitochondrial membrane potential"
evidence=IEA] [GO:2000377 "regulation of reactive oxygen species
metabolic process" evidence=IEA] GO:GO:0055114
GeneTree:ENSGT00500000044783 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 OMA:VSLNAPE GO:GO:0016121 EMBL:AADN02058015
IPI:IPI00602723 Ensembl:ENSGALT00000012775 Uniprot:E1C8E0
Length = 548
Score = 401 (146.2 bits), Expect = 8.3e-68, Sum P(3) = 8.3e-68
Identities = 78/192 (40%), Positives = 115/192 (59%)
Query: 1 QDNSEVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGL 60
Q E +P+ ++G IP WI+G L+RNGPG + GEE ++H FD LLH+F++ +G
Sbjct: 32 QTVEETPEPIPAKIKGHIPGWINGNLLRNGPGKFEFGEEKYNHWFDGMALLHQFQLRNGT 91
Query: 61 VTYQCKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFKPG--SDNTLVSV 118
VTYQ KF++S SY+ N+ RIVV+ FGT +PDPC S+F R + F P SDN VS
Sbjct: 92 VTYQSKFLQSNSYLINNQHNRIVVSEFGTLAMPDPCKSVFARFMSRFDPPKPSDNANVSY 151
Query: 119 YPIQDQVYALGDSNYMHRIDPATLDTLGKIDLAGDVTILHQTSHPLTTSDGETFNLGVTL 178
+ Y G++N M+++DP TL+ K+D V + T+HP DG +N+G +
Sbjct: 152 VVYKGDYYVTGENNCMYKVDPETLEMKEKVDWTKFVAVNGATAHPHYAPDGTAYNMGNSY 211
Query: 179 RPTGPRYCILQL 190
G Y I+++
Sbjct: 212 GKFGTTYNIIEV 223
Score = 213 (80.0 bits), Expect = 8.3e-68, Sum P(3) = 8.3e-68
Identities = 51/118 (43%), Positives = 65/118 (55%)
Query: 322 GCETPRMN-GQHQGRSYTYFYAISADIDRDNPG-TLIKVNVQNNTCKSWSQKDVYPSEPV 379
G E P++N Q+ GR Y YFY R G +L+KV+V+ K W + YPSEPV
Sbjct: 431 GLEFPQINYSQYSGRKYRYFYGCGF---RHFIGDSLMKVDVETKNFKIWQEDGSYPSEPV 487
Query: 380 FVATPNARKEDEGVLLSVLLWSHHPTRVSLLVLNARTMQELGRVNFTTPTPVPKCLHG 437
FV PNA ED GV+LSV++ LLVL+A T +ELGR P +P HG
Sbjct: 488 FVPVPNATAEDSGVILSVVISPDENRSAFLLVLDAETFRELGRAE--VPVQMPYGFHG 543
Score = 105 (42.0 bits), Expect = 8.3e-68, Sum P(3) = 8.3e-68
Identities = 35/100 (35%), Positives = 50/100 (50%)
Query: 219 STIFHVLDKTNGSVVH-RFQADSFFYLHIINAYEDTNDGIVVDICCYRNPAMLDCMYREA 277
+T FHV+DK G V+ ++ F H INA+ED +V+D+CC + L +Y+
Sbjct: 299 NTRFHVVDKRTGKVLPGQWYTKPFVTFHQINAFEDRGC-VVLDLCCQDDGKTL-AVYK-- 354
Query: 278 LKNIH-STPRYAQMF----RARPLRFRLDLASPRTAPTGK 312
L+N+ S Q+F R P RF L L P GK
Sbjct: 355 LQNMRKSGADLDQIFGSVARTFPRRFVLPLKVNSDTPVGK 394
>ZFIN|ZDB-GENE-060421-7448 [details] [associations]
symbol:bco2b "beta-carotene oxygenase 2b"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
ZFIN:ZDB-GENE-060421-7448 eggNOG:COG3670
GeneTree:ENSGT00500000044783 HOGENOM:HOG000232156
HOVERGEN:HBG050679 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 KO:K10252 OrthoDB:EOG45B1FD EMBL:BX572648
EMBL:BC115259 IPI:IPI00758725 RefSeq:NP_001035402.1
UniGene:Dr.82050 Ensembl:ENSDART00000061139 GeneID:678554
KEGG:dre:678554 CTD:678554 InParanoid:Q1RLW1 OMA:LWHIGDY
NextBio:20902398 Uniprot:Q1RLW1
Length = 555
Score = 398 (145.2 bits), Expect = 7.9e-64, Sum P(3) = 7.9e-64
Identities = 78/188 (41%), Positives = 113/188 (60%)
Query: 5 EVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQ 64
E +P+ T+ G +PSWI G +RNGPG + +G SF+H FD LLH+F I G VTY
Sbjct: 44 ETPEPITTTITGNVPSWIKGNFLRNGPGKFEIGRSSFNHWFDGMALLHQFHIEDGKVTYM 103
Query: 65 CKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK-PG-SDNTLVSVYPIQ 122
+F+ S+SY +N RI+V+ FGT +PDPC + FQR + F+ P SDN VS +
Sbjct: 104 SRFLNSDSYKENLEHNRIIVSEFGTVAMPDPCKNFFQRFLSRFELPKLSDNANVSFVQYK 163
Query: 123 DQVYALGDSNYMHRIDPATLDTLGKIDLAGDVTILHQTSHPLTTSDGETFNLGVTLRPTG 182
Y ++N+MH+IDP TL+T K+D + + + T+HP SDG T+N+G + G
Sbjct: 164 GDYYVSTETNFMHKIDPETLETKEKVDWSKFIAVNGATAHPHVDSDGTTYNMGNSYTVKG 223
Query: 183 PRYCILQL 190
Y I+ +
Sbjct: 224 AFYNIIMV 231
Score = 195 (73.7 bits), Expect = 7.9e-64, Sum P(3) = 7.9e-64
Identities = 46/120 (38%), Positives = 66/120 (55%)
Query: 322 GCETPRMN-GQHQGRSYTYFYAISADIDRDNPG-TLIKVNVQNNTCKSWSQKDVYPSEPV 379
G E P +N Y YFY R G +LIK+++Q K W ++PSEPV
Sbjct: 439 GLEFPHINYSMCNSHPYRYFYGCGF---RHLVGDSLIKMDLQGKQIKVWKHAGMFPSEPV 495
Query: 380 FVATPNARKEDEGVLLSVLLWSHHPTRVSLLVLNARTMQELGRVNFTTPTPVPKCLHGWY 439
FV++P A +ED+GV+LSV++ + LLVL+A+T +ELGR P +P HG +
Sbjct: 496 FVSSPGAVEEDDGVILSVVITPNQDKSTFLLVLDAKTFEELGRAE--VPKNIPYGFHGTF 553
Score = 88 (36.0 bits), Expect = 7.9e-64, Sum P(3) = 7.9e-64
Identities = 27/97 (27%), Positives = 45/97 (46%)
Query: 219 STIFHVLDKTNGSV-VHRFQADSFFYLHIINAYEDTNDGIVVDICCYRNPAMLDCMYREA 277
+T+FHV++K G + + ++ H IN YED N +++D+C + ++ +
Sbjct: 307 NTVFHVINKRTGKLSLVKYYTKPLSTFHQINCYED-NGFLIMDMCSSDDGQAINNYVIQN 365
Query: 278 LKNIHST--PRYAQMFRARPLRFRLDLASPRTAPTGK 312
LK S Y + R P RF L L P G+
Sbjct: 366 LKKSGSALDEVYNTLCRVFPRRFVLPLNVDSDTPHGE 402
>ZFIN|ZDB-GENE-081104-505 [details] [associations]
symbol:rpe65c "retinal pigment epithelium-specific
protein 65c" species:7955 "Danio rerio" [GO:0008152 "metabolic
process" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0050251 "retinol isomerase
activity" evidence=IDA] ZFIN:ZDB-GENE-081104-505
GeneTree:ENSGT00500000044783 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 EMBL:CR759968 Ensembl:ENSDART00000038725
Uniprot:K9J6Q0
Length = 532
Score = 404 (147.3 bits), Expect = 2.6e-63, Sum P(3) = 2.6e-63
Identities = 72/173 (41%), Positives = 114/173 (65%)
Query: 5 EVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQ 64
E+ +P+ V G IP+W+ G L+R GPG + VG+E F HLFD LLH+F + G VTY
Sbjct: 21 ELAEPIPAHVSGEIPAWLSGSLLRMGPGLFEVGDEPFYHLFDGQALLHKFDLKDGRVTYH 80
Query: 65 CKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK--PGSDNTLVSVYPIQ 122
+FI++++Y++ +R+V+T FGT PDPC +IF R T F+ +DN LV++YPI
Sbjct: 81 RRFIRTDAYVRAMTEKRVVITEFGTTAYPDPCKNIFSRFFTYFQGIEVTDNCLVNIYPIG 140
Query: 123 DQVYALGDSNYMHRIDPATLDTLGKIDLAGDVTILHQTSHPLTTSDGETFNLG 175
+ YA ++N++ ++DP TL+T+ K+DL +++ T+HP +DG +N+G
Sbjct: 141 EDFYACTETNFITKVDPDTLETVKKVDLCNYLSVNGLTAHPHIEADGTVYNIG 193
Score = 184 (69.8 bits), Expect = 2.6e-63, Sum P(3) = 2.6e-63
Identities = 42/120 (35%), Positives = 67/120 (55%)
Query: 324 ETPRMN-GQHQGRSYTYFYAISADIDRDNPGTLIKVNVQNNTCKSWSQKDVYPSEPVFVA 382
E P++N + G+ YT+ Y + ++ P + K+NV++ W + D YPSEP+FV
Sbjct: 417 EFPQINYSKFNGKDYTFAYGLG--LNHFVPDRICKLNVKSKETWIWQEPDAYPSEPLFVQ 474
Query: 383 TPNARKEDEGVLLSVLLWSHHPTRVS-LLVLNARTMQELGRVNFTTPTPVPKCLHGWYFP 441
+P+A ED+GVLLS+++ R + LL+L A + E+ R +P LHG Y P
Sbjct: 475 SPDAEDEDDGVLLSIVVKPGVSQRPAFLLILKATDLTEIARAE--VDVLIPLTLHGIYKP 532
Score = 88 (36.0 bits), Expect = 2.6e-63, Sum P(3) = 2.6e-63
Identities = 19/51 (37%), Positives = 28/51 (54%)
Query: 216 DMTSTIFHVLDKTNGSVV-HRFQADSFFYLHIINAYEDTNDGIVVDICCYR 265
D T FH+ K G + H+F+ +F H IN +ED IVVD+C ++
Sbjct: 283 DKMGTWFHLAAKNPGKYIDHKFRTSAFNIFHHINCFEDQGF-IVVDLCTWK 332
>ZFIN|ZDB-GENE-010509-1 [details] [associations]
symbol:bco2l "beta-carotene 15, 15-dioxygenase 2,
like" species:7955 "Danio rerio" [GO:0016702 "oxidoreductase
activity, acting on single donors with incorporation of molecular
oxygen, incorporation of two atoms of oxygen" evidence=IEA]
ZFIN:ZDB-GENE-010509-1 GO:GO:0016702 HOVERGEN:HBG050679
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055 EMBL:AJ290391
IPI:IPI00493963 RefSeq:NP_571874.1 UniGene:Dr.79440 GeneID:84041
KEGG:dre:84041 CTD:84041 InParanoid:Q90WH3 NextBio:20934203
ArrayExpress:Q90WH3 Uniprot:Q90WH3
Length = 549
Score = 377 (137.8 bits), Expect = 3.6e-63, Sum P(3) = 3.6e-63
Identities = 74/188 (39%), Positives = 112/188 (59%)
Query: 5 EVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQ 64
E+ P+ ++G IPSWI+G +RNGPG + GE F H FD L+HRF I G VTY
Sbjct: 36 EIPDPITTLIKGQIPSWINGSFLRNGPGKFEFGESKFTHWFDGMALMHRFNIKDGQVTYS 95
Query: 65 CKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK-PGS-DNTLVSVYPIQ 122
+F++S+SY++N RIVV+ FGT PDPC +IF R + F+ P + DN V+ +
Sbjct: 96 SRFLQSDSYVQNSEKNRIVVSEFGTLATPDPCKNIFARFFSRFQIPKTTDNAGVNFVKYK 155
Query: 123 DQVYALGDSNYMHRIDPATLDTLGKIDLAGDVTILHQTSHPLTTSDGETFNLGVTLRPTG 182
Y ++N+M +IDP +L+T K+D + + + T+HP +G T+N+G + G
Sbjct: 156 GDFYVSTETNFMRKIDPVSLETKEKVDWSKFIAVSAATAHPHYDREGATYNMGNSYGRKG 215
Query: 183 PRYCILQL 190
Y IL++
Sbjct: 216 FFYHILRV 223
Score = 196 (74.1 bits), Expect = 3.6e-63, Sum P(3) = 3.6e-63
Identities = 43/120 (35%), Positives = 67/120 (55%)
Query: 322 GCETPRMN-GQHQGRSYTYFYAIS-ADIDRDNPGTLIKVNVQNNTCKSWSQKDVYPSEPV 379
G E P++N + R Y YFYA + D+ L+K++++ K W ++PSEPV
Sbjct: 431 GLEFPQINYANYNARPYRYFYACGFGHVFGDS---LLKMDLEGKKLKVWRHAGLFPSEPV 487
Query: 380 FVATPNARKEDEGVLLSVLLWSHHPTRVSLLVLNARTMQELGRVNFTTPTPVPKCLHGWY 439
F+ P+A+ ED+GV++SV++ LLVL+A+T ELGR P +P HG +
Sbjct: 488 FIPAPDAQDEDDGVVMSVIITPREKKSSFLLVLDAKTFTELGRAE--VPVDIPYGTHGLF 545
Score = 103 (41.3 bits), Expect = 3.6e-63, Sum P(3) = 3.6e-63
Identities = 19/45 (42%), Positives = 32/45 (71%)
Query: 220 TIFHVLDKTNGSVVH-RFQADSFFYLHIINAYEDTNDGIVVDICC 263
TIFHV D+ G +++ ++ + + F LH INAYE+ N +++D+CC
Sbjct: 301 TIFHVADRHTGQLLNTKYYSSAMFALHQINAYEE-NGYLIMDMCC 344
>MGI|MGI:2177469 [details] [associations]
symbol:Bco2 "beta-carotene oxygenase 2" species:10090 "Mus
musculus" [GO:0005622 "intracellular" evidence=IC] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0016116 "carotenoid metabolic
process" evidence=IMP] [GO:0016119 "carotene metabolic process"
evidence=ISO;IDA] [GO:0016121 "carotene catabolic process"
evidence=ISO;IDA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=ISO;IDA] [GO:0042573 "retinoic
acid metabolic process" evidence=NAS] [GO:0042574 "retinal
metabolic process" evidence=NAS] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0051881 "regulation of mitochondrial membrane
potential" evidence=IMP] [GO:0055114 "oxidation-reduction process"
evidence=ISO;IDA] [GO:2000377 "regulation of reactive oxygen
species metabolic process" evidence=IMP] MGI:MGI:2177469
GO:GO:0005739 GO:GO:0046872 GO:GO:0051881 GO:GO:0016702
GO:GO:0042573 GO:GO:0042574 eggNOG:COG3670
GeneTree:ENSGT00500000044783 HOGENOM:HOG000232156
HOVERGEN:HBG050679 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 CTD:83875 KO:K10252 OMA:VSLNAPE OrthoDB:EOG45B1FD
GO:GO:0016121 GO:GO:0016116 GO:GO:2000377 EMBL:AJ290392
IPI:IPI00118726 RefSeq:NP_573480.1 UniGene:Mm.390149
ProteinModelPortal:Q99NF1 SMR:Q99NF1 PhosphoSite:Q99NF1
PaxDb:Q99NF1 PRIDE:Q99NF1 Ensembl:ENSMUST00000119103 GeneID:170752
KEGG:mmu:170752 InParanoid:Q99NF1 NextBio:370330 Bgee:Q99NF1
Genevestigator:Q99NF1 GermOnline:ENSMUSG00000032066 Uniprot:Q99NF1
Length = 532
Score = 356 (130.4 bits), Expect = 1.7e-62, Sum P(3) = 1.7e-62
Identities = 74/227 (32%), Positives = 124/227 (54%)
Query: 10 VQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQCKFIK 69
V V G IP W++G L+R GPG + G++ ++H FD LLH+F++ G VTY+ KF++
Sbjct: 25 VSARVRGHIPEWLNGYLLRVGPGKFEFGKDRYNHWFDGMALLHQFRMERGTVTYKSKFLQ 84
Query: 70 SESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFKPGS--DNTLVSVYPIQDQVYA 127
S++Y N A RIV++ FGT +PDPC SIF+R + F+P + DNT V+ + Y
Sbjct: 85 SDTYKANSAGGRIVISEFGTLALPDPCKSIFERFMSRFEPPTMTDNTNVNFVQYKGDYYM 144
Query: 128 LGDSNYMHRIDPATLDTLGKIDLAGDVTILHQTSHPLTTSDGETFNLGVTLRPTGPRYCI 187
++N+M+++D L+ K+D + + + T+HP DG +N+G + P G Y I
Sbjct: 145 STETNFMNKVDIEMLERTEKVDWSKFIAVNGATAHPHYDPDGTAYNMGNSYGPRGSCYNI 204
Query: 188 LQLNDAFSYP-DLSHXXXXXXSLRFRDDIDMTSTIFHVLDKTNGSVV 233
+++ P + H S+ + M + +H T ++
Sbjct: 205 IRVPPKKKEPGETIHGAQVLCSIASTEK--MKPSYYHSFGMTKNYII 249
Score = 218 (81.8 bits), Expect = 1.7e-62, Sum P(3) = 1.7e-62
Identities = 50/122 (40%), Positives = 71/122 (58%)
Query: 322 GCETPRMN-GQHQGRSYTYFYAISADIDRDNPG-TLIKVNVQNNTCKSWSQKDVYPSEPV 379
G E P++N G+ G+ Y++FY R G +LIKV+V N T + W ++ YPSEPV
Sbjct: 415 GIEFPQINYGRFNGKKYSFFYGCGF---RHLVGDSLIKVDVTNKTLRVWREEGFYPSEPV 471
Query: 380 FVATPNARKEDEGVLLSVLLWSHHPTRVSLLVLNARTMQELGRVNFTTPTPVPKCLHGWY 439
FV P A +ED GV+LSV++ + LLVL+A++ ELGR P +P HG +
Sbjct: 472 FVPVPGADEEDSGVILSVVITPNQSESNFLLVLDAKSFTELGRAE--VPVQMPYGFHGTF 529
Query: 440 FP 441
P
Sbjct: 530 VP 531
Score = 99 (39.9 bits), Expect = 1.7e-62, Sum P(3) = 1.7e-62
Identities = 33/100 (33%), Positives = 49/100 (49%)
Query: 219 STIFHVLDKTNGSVVH-RFQADSFFYLHIINAYEDTNDGIVVDICCYRNPAMLDCMYREA 277
+T FHV+DK G ++ + + F H INA+ED IV+D+CC + LD +Y+
Sbjct: 283 NTRFHVVDKHTGQLLPGMYYSMPFLTYHQINAFEDQGC-IVIDLCCQDDGRSLD-LYQ-- 338
Query: 278 LKNIHSTPR-----YAQMFRARPLRFRLDLASPRTAPTGK 312
L+N+ Y ++ P RF L L A GK
Sbjct: 339 LQNLRKAGEGLDQVYELKAKSFPRRFVLPLDVSVDAAEGK 378
>ZFIN|ZDB-GENE-050410-16 [details] [associations]
symbol:rpe65b "retinal pigment epithelium-specific
protein 65b" species:7955 "Danio rerio" [GO:0008150
"biological_process" evidence=ND] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
ZFIN:ZDB-GENE-050410-16 GO:GO:0005886 GO:GO:0005737 GO:GO:0046872
GO:GO:0016787 GeneTree:ENSGT00500000044783 HOVERGEN:HBG050679
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055 EMBL:AY646887
EMBL:CR759968 EMBL:BC133985 EMBL:BC155753 IPI:IPI00851384
RefSeq:NP_001082902.2 UniGene:Dr.79444 ProteinModelPortal:A9C3R9
PRIDE:A9C3R9 DNASU:100002865 Ensembl:ENSDART00000076542
GeneID:100002865 KEGG:dre:100002865 CTD:100002865
BioCyc:MetaCyc:MONOMER-16789 NextBio:20785619 Bgee:A9C3R9
Uniprot:A9C3R9
Length = 532
Score = 392 (143.0 bits), Expect = 4.8e-62, Sum P(3) = 4.8e-62
Identities = 68/173 (39%), Positives = 113/173 (65%)
Query: 5 EVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQ 64
E+ +P+ V G IP+W+ G L+R GPG + +G+E F+HLFD L+H+F + G VTY
Sbjct: 21 ELAEPIPAHVSGKIPAWLSGSLLRMGPGLFEIGDEPFNHLFDGQALIHKFDLKDGRVTYH 80
Query: 65 CKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFKPG--SDNTLVSVYPIQ 122
KFI++++Y++ +R+V+T GT PDPC +IF R T F+ +DN V++YPI
Sbjct: 81 RKFIRTDAYVRAMTEKRVVITELGTAAYPDPCKNIFSRFFTYFQGTEVTDNCSVNIYPIG 140
Query: 123 DQVYALGDSNYMHRIDPATLDTLGKIDLAGDVTILHQTSHPLTTSDGETFNLG 175
+ YA ++N++ +++P TL+T+ K+DL +++ T+HP +DG +N+G
Sbjct: 141 EDFYACTETNFITKVNPDTLETIKKVDLCNYLSVNGLTAHPHIEADGTVYNIG 193
Score = 184 (69.8 bits), Expect = 4.8e-62, Sum P(3) = 4.8e-62
Identities = 42/120 (35%), Positives = 67/120 (55%)
Query: 324 ETPRMN-GQHQGRSYTYFYAISADIDRDNPGTLIKVNVQNNTCKSWSQKDVYPSEPVFVA 382
E P++N + G+ YT+ Y + ++ P + K+NV++ W + D YPSEP+FV
Sbjct: 417 EFPQINYSKFNGKDYTFAYGLG--LNHFVPDRICKLNVKSKETWIWQEPDAYPSEPLFVQ 474
Query: 383 TPNARKEDEGVLLSVLLWSHHPTRVS-LLVLNARTMQELGRVNFTTPTPVPKCLHGWYFP 441
+P+A ED+GVLLS+++ R + LL+L A + E+ R +P LHG Y P
Sbjct: 475 SPDAEDEDDGVLLSIVVKPGVSQRPAFLLILKATDLTEIARAE--VDVLIPLTLHGIYKP 532
Score = 88 (36.0 bits), Expect = 4.8e-62, Sum P(3) = 4.8e-62
Identities = 19/51 (37%), Positives = 28/51 (54%)
Query: 216 DMTSTIFHVLDKTNGSVV-HRFQADSFFYLHIINAYEDTNDGIVVDICCYR 265
D T FH+ K G + H+F+ +F H IN +ED IVVD+C ++
Sbjct: 283 DRMGTWFHLAAKNPGKYIDHKFRTSAFNIFHHINCFEDQGF-IVVDLCTWK 332
>UNIPROTKB|F1PXT9 [details] [associations]
symbol:RPE65 "Retinoid isomerohydrolase" species:9615
"Canis lupus familiaris" [GO:0071257 "cellular response to
electrical stimulus" evidence=IEA] [GO:0060042 "retina
morphogenesis in camera-type eye" evidence=IEA] [GO:0042574
"retinal metabolic process" evidence=IEA] [GO:0008286 "insulin
receptor signaling pathway" evidence=IEA] [GO:0007601 "visual
perception" evidence=IEA] [GO:0007468 "regulation of rhodopsin gene
expression" evidence=IEA] [GO:0004744 "retinal isomerase activity"
evidence=IEA] GeneTree:ENSGT00500000044783 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 OMA:WLHVADK EMBL:AAEX03004935
EMBL:AAEX03004936 Ensembl:ENSCAFT00000032537 Uniprot:F1PXT9
Length = 533
Score = 385 (140.6 bits), Expect = 7.7e-62, Sum P(3) = 7.7e-62
Identities = 72/173 (41%), Positives = 110/173 (63%)
Query: 5 EVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQ 64
E+ P+ V G IP W+ G L+R GPG + VG E F HLFD LLH+F G VTY
Sbjct: 21 ELSSPLTAHVTGRIPLWLTGSLLRCGPGLFEVGSEPFYHLFDGQALLHKFDFKEGHVTYH 80
Query: 65 CKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK--PGSDNTLVSVYPIQ 122
+FI++++Y++ +RIV+T FGT PDPC +IF R + F+ +DN LV+VYP+
Sbjct: 81 RRFIRTDAYVRAMTEKRIVITEFGTCAFPDPCKNIFSRFFSYFRGVEVTDNALVNVYPVG 140
Query: 123 DQVYALGDSNYMHRIDPATLDTLGKIDLAGDVTILHQTSHPLTTSDGETFNLG 175
+ YA ++N++ +I+P TL+T+ ++DL V++ T+HP +DG +N+G
Sbjct: 141 EDYYACTETNFITKINPETLETIKQVDLCNYVSVNGATAHPHIENDGTVYNIG 193
Score = 183 (69.5 bits), Expect = 7.7e-62, Sum P(3) = 7.7e-62
Identities = 43/118 (36%), Positives = 68/118 (57%)
Query: 324 ETPRMNGQ-HQGRSYTYFYAISADIDRDNPGTLIKVNVQNNTCKSWSQKDVYPSEPVFVA 382
E P++N Q + G+ YTY Y + ++ P L K+NV+ W + D YPSEP+FV+
Sbjct: 417 EFPQINYQKYGGKPYTYAYGLG--LNHFVPDRLCKLNVKTKETWVWQEPDSYPSEPIFVS 474
Query: 383 TPNARKEDEGVLLSVLLWSHHPTRVS-LLVLNARTMQELGRVNFTTPTPVPKCLHGWY 439
P+A +ED+GV+LSV++ + + LL+LNA+ + E+ R PV HG +
Sbjct: 475 HPDALEEDDGVVLSVVVSPGAGQKPAYLLILNAKDLSEVARAEVEINIPVT--FHGLF 530
Score = 94 (38.1 bits), Expect = 7.7e-62, Sum P(3) = 7.7e-62
Identities = 29/96 (30%), Positives = 48/96 (50%)
Query: 223 HVLDKTNGSVVH-RFQADSFFYLHIINAYEDTNDGIVVDICCYRN-PAMLDCMY----RE 276
H+ DK ++ +++ SF H IN YED N+ ++VD+CC++ + + +Y RE
Sbjct: 290 HIADKKRKKYLNNKYRTSSFNLFHHINTYED-NEFLIVDLCCWKGFEFVYNYLYLANLRE 348
Query: 277 ALKNIHSTPRYAQMFRARPLRFRLDLASPRTAPTGK 312
+ + R A R R+ L L + A TGK
Sbjct: 349 NWEEVKKNARKAPQPEVR--RYVLPLNIDK-ADTGK 381
Score = 38 (18.4 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 14/57 (24%), Positives = 24/57 (42%)
Query: 145 LGKIDLAGDVTILHQTSHPLTTSDGETFNLGVTLRPTGPRYCILQLNDAFSYPDLSH 201
+ K D ++ L T+ T ET L + +GPR AF +P +++
Sbjct: 374 IDKADTGKNLVTLPNTTATATLRSDETIWLEPEVLFSGPR-------QAFEFPQINY 423
>UNIPROTKB|Q9TVB8 [details] [associations]
symbol:RPE65 "Retinoid isomerohydrolase" species:9615
"Canis lupus familiaris" [GO:0031090 "organelle membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0052885 "all-trans-retinyl-ester hydrolase, 11-cis retinol
forming activity" evidence=IEA] [GO:0052884
"all-trans-retinyl-palmitate hydrolase, 11-cis retinol forming
activity" evidence=IEA] [GO:0050896 "response to stimulus"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0016853 "isomerase activity" evidence=IEA] [GO:0007601 "visual
perception" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] GO:GO:0005783 GO:GO:0005886 GO:GO:0046872
GO:GO:0007601 GO:GO:0050896 GO:GO:0016853 eggNOG:COG3670
HOGENOM:HOG000232156 HOVERGEN:HBG050679 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 GO:GO:0031090 OrthoDB:EOG47M1XK
GO:GO:0052885 GO:GO:0052884 CTD:6121 KO:K11158 EMBL:AF084537
EMBL:Y16567 EMBL:AJ506754 EMBL:AJ506755 EMBL:AJ506756 EMBL:AJ506757
EMBL:AJ251207 EMBL:AJ506759 RefSeq:NP_001003176.1 UniGene:Cfa.3665
ProteinModelPortal:Q9TVB8 STRING:Q9TVB8 GeneID:403803
KEGG:cfa:403803 InParanoid:Q9TVB8 NextBio:20817300 Uniprot:Q9TVB8
Length = 533
Score = 385 (140.6 bits), Expect = 9.8e-62, Sum P(3) = 9.8e-62
Identities = 72/173 (41%), Positives = 110/173 (63%)
Query: 5 EVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQ 64
E+ P+ V G IP W+ G L+R GPG + VG E F HLFD LLH+F G VTY
Sbjct: 21 ELSSPLTAHVTGRIPLWLTGSLLRCGPGLFEVGSEPFYHLFDGQALLHKFDFKEGHVTYH 80
Query: 65 CKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK--PGSDNTLVSVYPIQ 122
+FI++++Y++ +RIV+T FGT PDPC +IF R + F+ +DN LV+VYP+
Sbjct: 81 RRFIRTDAYVRAMTEKRIVITEFGTCAFPDPCKNIFSRFFSYFRGVEVTDNALVNVYPVG 140
Query: 123 DQVYALGDSNYMHRIDPATLDTLGKIDLAGDVTILHQTSHPLTTSDGETFNLG 175
+ YA ++N++ +I+P TL+T+ ++DL V++ T+HP +DG +N+G
Sbjct: 141 EDYYACTETNFITKINPETLETIKQVDLCNYVSVNGATAHPHIENDGTVYNIG 193
Score = 182 (69.1 bits), Expect = 9.8e-62, Sum P(3) = 9.8e-62
Identities = 43/118 (36%), Positives = 67/118 (56%)
Query: 324 ETPRMNGQHQG-RSYTYFYAISADIDRDNPGTLIKVNVQNNTCKSWSQKDVYPSEPVFVA 382
E P++N Q G + YTY Y + ++ P L K+NV+ W + D YPSEP+FV+
Sbjct: 417 EFPQINYQKSGGKPYTYAYGLG--LNHFVPDRLCKLNVKTKETWVWQEPDSYPSEPIFVS 474
Query: 383 TPNARKEDEGVLLSVLLWSHHPTRVS-LLVLNARTMQELGRVNFTTPTPVPKCLHGWY 439
P+A +ED+GV+LSV++ + + LL+LNA+ + E+ R PV HG +
Sbjct: 475 HPDALEEDDGVVLSVVVSPGAGQKPAYLLILNAKDLSEVARAEVEINIPVT--FHGLF 530
Score = 94 (38.1 bits), Expect = 9.8e-62, Sum P(3) = 9.8e-62
Identities = 29/96 (30%), Positives = 48/96 (50%)
Query: 223 HVLDKTNGSVVH-RFQADSFFYLHIINAYEDTNDGIVVDICCYRN-PAMLDCMY----RE 276
H+ DK ++ +++ SF H IN YED N+ ++VD+CC++ + + +Y RE
Sbjct: 290 HIADKKRKKYLNNKYRTSSFNLFHHINTYED-NEFLIVDLCCWKGFEFVYNYLYLANLRE 348
Query: 277 ALKNIHSTPRYAQMFRARPLRFRLDLASPRTAPTGK 312
+ + R A R R+ L L + A TGK
Sbjct: 349 NWEEVKKNARKAPQPEVR--RYVLPLNIDK-ADTGK 381
>MGI|MGI:98001 [details] [associations]
symbol:Rpe65 "retinal pigment epithelium 65" species:10090
"Mus musculus" [GO:0004744 "retinal isomerase activity"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007468 "regulation of rhodopsin gene expression"
evidence=IMP] [GO:0007601 "visual perception" evidence=IMP]
[GO:0008286 "insulin receptor signaling pathway" evidence=IMP]
[GO:0016020 "membrane" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016853 "isomerase activity"
evidence=IEA] [GO:0042574 "retinal metabolic process" evidence=IMP]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0050896 "response to stimulus" evidence=IEA] [GO:0052884
"all-trans-retinyl-palmitate hydrolase, 11-cis retinol forming
activity" evidence=IEA] [GO:0052885 "all-trans-retinyl-ester
hydrolase, 11-cis retinol forming activity" evidence=IEA]
[GO:0060041 "retina development in camera-type eye" evidence=IMP]
[GO:0060042 "retina morphogenesis in camera-type eye" evidence=IMP]
[GO:0071257 "cellular response to electrical stimulus"
evidence=IMP] MGI:MGI:98001 GO:GO:0005783 GO:GO:0005886
GO:GO:0008286 GO:GO:0046872 GO:GO:0007601 GO:GO:0042574
eggNOG:COG3670 HOGENOM:HOG000232156 HOVERGEN:HBG050679
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055 GO:GO:0031090
GO:GO:0007468 GO:GO:0071257 GO:GO:0060042 GO:GO:0004744
OrthoDB:EOG47M1XK GO:GO:0052885 GO:GO:0052884 EMBL:AF410461
EMBL:AC163272 EMBL:AH011240 IPI:IPI00131304 UniGene:Mm.131708
ProteinModelPortal:Q91ZQ5 SMR:Q91ZQ5 STRING:Q91ZQ5
PhosphoSite:Q91ZQ5 PRIDE:Q91ZQ5 InParanoid:Q91ZQ5 CleanEx:MM_RPE65
Genevestigator:Q91ZQ5 GermOnline:ENSMUSG00000028174 Uniprot:Q91ZQ5
Length = 533
Score = 389 (142.0 bits), Expect = 1.3e-61, Sum P(3) = 1.3e-61
Identities = 72/173 (41%), Positives = 110/173 (63%)
Query: 5 EVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQ 64
E+ P+ V G IP W+ G L+R GPG + VG E F HLFD LLH+F G VTY
Sbjct: 21 ELSSPLTAHVTGRIPLWLTGSLLRCGPGLFEVGSEPFYHLFDGQALLHKFDFKEGHVTYH 80
Query: 65 CKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK--PGSDNTLVSVYPIQ 122
+FI++++Y++ +RIV+T FGT PDPC +IF R + FK +DN LV++YP+
Sbjct: 81 RRFIRTDAYVRAMTEKRIVITEFGTCAFPDPCKNIFSRFFSYFKGVEVTDNALVNIYPVG 140
Query: 123 DQVYALGDSNYMHRIDPATLDTLGKIDLAGDVTILHQTSHPLTTSDGETFNLG 175
+ YA ++N++ +I+P TL+T+ ++DL +++ T+HP SDG +N+G
Sbjct: 141 EDYYACTETNFITKINPETLETIKQVDLCNYISVNGATAHPHIESDGTVYNIG 193
Score = 190 (71.9 bits), Expect = 1.3e-61, Sum P(3) = 1.3e-61
Identities = 45/118 (38%), Positives = 68/118 (57%)
Query: 324 ETPRMNGQH-QGRSYTYFYAISADIDRDNPGTLIKVNVQNNTCKSWSQKDVYPSEPVFVA 382
E P++N Q G+ YTY Y + ++ P L K+NV+ W + D YPSEP+FV+
Sbjct: 417 EFPQINYQKFGGKPYTYAYGLG--LNHFVPDKLCKLNVKTKEIWMWQEPDSYPSEPIFVS 474
Query: 383 TPNARKEDEGVLLSVLLWSHHPTRVS-LLVLNARTMQELGRVNFTTPTPVPKCLHGWY 439
P+A +ED+GV+LSV++ + + LLVLNA+ + E+ R T PV HG +
Sbjct: 475 QPDALEEDDGVVLSVVVSPGAGQKPAYLLVLNAKDLSEIARAEVETNIPVT--FHGLF 530
Score = 81 (33.6 bits), Expect = 1.3e-61, Sum P(3) = 1.3e-61
Identities = 16/44 (36%), Positives = 25/44 (56%)
Query: 223 HVLDKTNGSVVH-RFQADSFFYLHIINAYEDTNDGIVVDICCYR 265
HV DK + +++ F H IN YED N ++VD+CC++
Sbjct: 290 HVADKKRRKYFNNKYRTSPFNLFHHINTYED-NGFLIVDLCCWK 332
Score = 48 (22.0 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 18/59 (30%), Positives = 29/59 (49%)
Query: 144 TLGKIDLAGD-VTILHQTSHPLTTSDGETFNLGVTLRPTGPRYCILQLNDAFSYPDLSH 201
T+ K+D + VT+ H T+ SD ET L + +GPR AF +P +++
Sbjct: 373 TIDKVDTGRNLVTLPHTTATATLRSD-ETIWLEPEVLFSGPR-------QAFEFPQINY 423
>UNIPROTKB|F1S830 [details] [associations]
symbol:RPE65 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071257 "cellular response to electrical stimulus"
evidence=IEA] [GO:0060042 "retina morphogenesis in camera-type eye"
evidence=IEA] [GO:0042574 "retinal metabolic process" evidence=IEA]
[GO:0008286 "insulin receptor signaling pathway" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0007468
"regulation of rhodopsin gene expression" evidence=IEA] [GO:0004744
"retinal isomerase activity" evidence=IEA]
GeneTree:ENSGT00500000044783 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 OMA:WLHVADK EMBL:CU929726 Ensembl:ENSSSCT00000004199
Uniprot:F1S830
Length = 533
Score = 384 (140.2 bits), Expect = 1.6e-61, Sum P(3) = 1.6e-61
Identities = 71/173 (41%), Positives = 110/173 (63%)
Query: 5 EVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQ 64
E+ P+ V G IP W+ G L+R GPG + VG E F HLFD LLH+F G VTY
Sbjct: 21 ELSSPLTAHVTGRIPLWLTGSLLRCGPGLFEVGSEPFYHLFDGQALLHKFDFKEGHVTYH 80
Query: 65 CKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK--PGSDNTLVSVYPIQ 122
+FI++++Y++ +RIV+T FGT PDPC +IF R + F+ +DN LV++YP+
Sbjct: 81 RRFIRTDAYVRAMTEKRIVITEFGTCAFPDPCKNIFSRFFSYFRGVEVTDNALVNIYPVG 140
Query: 123 DQVYALGDSNYMHRIDPATLDTLGKIDLAGDVTILHQTSHPLTTSDGETFNLG 175
+ YA ++N++ +I+P TL+T+ ++DL V++ T+HP +DG +N+G
Sbjct: 141 EDYYACTETNFITKINPETLETIKQVDLCNYVSVNGATAHPHIENDGTVYNIG 193
Score = 186 (70.5 bits), Expect = 1.6e-61, Sum P(3) = 1.6e-61
Identities = 44/118 (37%), Positives = 68/118 (57%)
Query: 324 ETPRMNGQ-HQGRSYTYFYAISADIDRDNPGTLIKVNVQNNTCKSWSQKDVYPSEPVFVA 382
E P++N Q + G+ YTY Y + ++ P L K+NV+ W + D YPSEP+FVA
Sbjct: 417 EFPQINYQKYGGKPYTYAYGLG--LNHFVPDRLCKLNVKTKETWVWQEPDSYPSEPIFVA 474
Query: 383 TPNARKEDEGVLLSVLLWSHHPTRVS-LLVLNARTMQELGRVNFTTPTPVPKCLHGWY 439
P+A +ED+GV+LSV++ + + LL+LNA+ + E+ R PV HG +
Sbjct: 475 HPDALEEDDGVVLSVVVSPGAGQKPAYLLILNAKDLSEVARAEVEINIPVT--FHGLF 530
Score = 89 (36.4 bits), Expect = 1.6e-61, Sum P(3) = 1.6e-61
Identities = 28/96 (29%), Positives = 47/96 (48%)
Query: 223 HVLDKTNGSVVH-RFQADSFFYLHIINAYEDTNDGIVVDICCYRN-PAMLDCMY----RE 276
H+ DK ++ +++ F H IN YED N+ ++VD+CC++ + + +Y RE
Sbjct: 290 HIADKKRKKYLNNKYRTSPFNLFHHINTYED-NEFLIVDLCCWKGFEFVYNYLYLANLRE 348
Query: 277 ALKNIHSTPRYAQMFRARPLRFRLDLASPRTAPTGK 312
+ + R A R R+ L L + A TGK
Sbjct: 349 NWEEVKKNARKAPQPEVR--RYVLPLNIDK-ADTGK 381
>UNIPROTKB|Q9YGX2 [details] [associations]
symbol:RPE65 "Retinoid isomerohydrolase" species:9031
"Gallus gallus" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0007601 "visual perception" evidence=IEA] [GO:0016853
"isomerase activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0050896 "response to stimulus" evidence=IEA]
[GO:0052884 "all-trans-retinyl-palmitate hydrolase, 11-cis retinol
forming activity" evidence=IEA] [GO:0052885
"all-trans-retinyl-ester hydrolase, 11-cis retinol forming
activity" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0031090 "organelle membrane" evidence=IEA] GO:GO:0005783
GO:GO:0005886 GO:GO:0046872 GO:GO:0007601 GO:GO:0050896
GO:GO:0016853 eggNOG:COG3670 HOGENOM:HOG000232156
HOVERGEN:HBG050679 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 GO:GO:0031090 OrthoDB:EOG47M1XK GO:GO:0052885
GO:GO:0052884 CTD:6121 KO:K11158 EMBL:AB017594 IPI:IPI00584895
RefSeq:NP_990215.1 UniGene:Gga.408 ProteinModelPortal:Q9YGX2
STRING:Q9YGX2 GeneID:395700 KEGG:gga:395700 InParanoid:Q9YGX2
NextBio:20815770 Uniprot:Q9YGX2
Length = 533
Score = 390 (142.3 bits), Expect = 2.6e-61, Sum P(3) = 2.6e-61
Identities = 73/173 (42%), Positives = 111/173 (64%)
Query: 5 EVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQ 64
E+ PV V G IP+W+ G L+R GPG + VG E F HLFD LLH+F G VTY
Sbjct: 21 ELSSPVTAHVTGRIPTWLRGSLLRCGPGLFEVGAEPFYHLFDGQALLHKFDFKEGHVTYH 80
Query: 65 CKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK--PGSDNTLVSVYPIQ 122
+F+++++Y++ +RIV+T FGT PDPC +IF R + FK +DN LV+VYP+
Sbjct: 81 RRFVRTDAYVRAMTEKRIVITEFGTYAYPDPCKNIFSRFFSYFKGVEVTDNALVNVYPVG 140
Query: 123 DQVYALGDSNYMHRIDPATLDTLGKIDLAGDVTILHQTSHPLTTSDGETFNLG 175
+ YA ++N++ +I+P TL+T+ ++DL V++ T+HP +DG +N+G
Sbjct: 141 EDYYACTETNFITKINPDTLETIKQVDLCKYVSVNGATAHPHVENDGTVYNIG 193
Score = 190 (71.9 bits), Expect = 2.6e-61, Sum P(3) = 2.6e-61
Identities = 43/118 (36%), Positives = 67/118 (56%)
Query: 324 ETPRMN-GQHQGRSYTYFYAISADIDRDNPGTLIKVNVQNNTCKSWSQKDVYPSEPVFVA 382
E P++N ++ G+ YTY Y + ++ P L K+NV+ W + D YPSEP+FV+
Sbjct: 417 EFPQINYKKYGGKPYTYTYGLG--LNHFVPDRLCKLNVKTKETWVWQEPDSYPSEPIFVS 474
Query: 383 TPNARKEDEGVLLSVLLW-SHHPTRVSLLVLNARTMQELGRVNFTTPTPVPKCLHGWY 439
P+A +ED+GV+LS+++ P LL+LNA+ M E+ R PV HG +
Sbjct: 475 HPDALEEDDGVVLSIVISPGSGPKPAYLLILNAKDMSEVARAEVEVNIPVT--FHGLF 530
Score = 77 (32.2 bits), Expect = 2.6e-61, Sum P(3) = 2.6e-61
Identities = 25/94 (26%), Positives = 48/94 (51%)
Query: 223 HVLDKTNGSVVH-RFQADSFFYLHIINAYEDTNDGIVVDICCYRN-PAMLDCMYREALK- 279
HV +K G +++ +++ +F H IN +ED N ++VD+C ++ + + +Y L+
Sbjct: 290 HVAEKKKGRLLNIKYRTSAFNLFHHINTFED-NGFLIVDLCTWKGFEFVYNYLYLANLRA 348
Query: 280 NIHSTPRYAQMF-RARPLRFRLDLASPRTAPTGK 312
N + A+ + R+ L L + A TGK
Sbjct: 349 NWDEVKKQAEKAPQPEARRYVLPLRIDK-ADTGK 381
>RGD|621396 [details] [associations]
symbol:Rpe65 "retinal pigment epithelium 65" species:10116
"Rattus norvegicus" [GO:0001654 "eye development" evidence=NAS]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0016853 "isomerase activity" evidence=IEA]
[GO:0031090 "organelle membrane" evidence=IEA] [GO:0042574 "retinal
metabolic process" evidence=IMP] [GO:0044297 "cell body"
evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0050896 "response to stimulus" evidence=IEA] [GO:0052884
"all-trans-retinyl-palmitate hydrolase, 11-cis retinol forming
activity" evidence=IEA] [GO:0052885 "all-trans-retinyl-ester
hydrolase, 11-cis retinol forming activity" evidence=IMP]
RGD:621396 GO:GO:0005783 GO:GO:0005886 GO:GO:0046872 GO:GO:0007601
GO:GO:0050896 GO:GO:0016853 GO:GO:0042574 GO:GO:0044297
GO:GO:0001654 HOVERGEN:HBG050679 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 GO:GO:0031090 GO:GO:0052885
GO:GO:0052884 CTD:6121 KO:K11158 EMBL:AF035673 IPI:IPI00196676
RefSeq:NP_446014.1 UniGene:Rn.76724 ProteinModelPortal:O70276
GeneID:89826 KEGG:rno:89826 NextBio:617740 Genevestigator:O70276
Uniprot:O70276
Length = 533
Score = 385 (140.6 bits), Expect = 2.6e-61, Sum P(3) = 2.6e-61
Identities = 72/173 (41%), Positives = 110/173 (63%)
Query: 5 EVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQ 64
E+ P+ V G IP W+ G L+R GPG + VG E F HLFD LLH+F G VTY
Sbjct: 21 ELSTPLTAHVTGRIPLWLTGSLLRCGPGLFEVGSEPFYHLFDGQALLHKFDFKEGHVTYY 80
Query: 65 CKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK--PGSDNTLVSVYPIQ 122
+FI++++Y++ +RIV+T FGT PDPC +IF R + F+ +DN LV++YP+
Sbjct: 81 RRFIRTDAYVRAMTEKRIVITEFGTCAFPDPCKNIFSRFFSYFRGVEVTDNALVNIYPVG 140
Query: 123 DQVYALGDSNYMHRIDPATLDTLGKIDLAGDVTILHQTSHPLTTSDGETFNLG 175
+ YA ++N++ +I+P TL+T+ ++DL V++ T+HP SDG +N+G
Sbjct: 141 EDYYACTETNFITKINPETLETIKQVDLCNYVSVNGATAHPHIESDGTVYNIG 193
Score = 190 (71.9 bits), Expect = 2.6e-61, Sum P(3) = 2.6e-61
Identities = 45/118 (38%), Positives = 68/118 (57%)
Query: 324 ETPRMNGQH-QGRSYTYFYAISADIDRDNPGTLIKVNVQNNTCKSWSQKDVYPSEPVFVA 382
E P++N Q G+ YTY Y + ++ P L K+NV+ W + D YPSEP+FV+
Sbjct: 417 EFPQINYQKCGGKPYTYAYGLG--LNHFVPDKLCKLNVKTKEIWMWQEPDSYPSEPIFVS 474
Query: 383 TPNARKEDEGVLLSVLLWSHHPTRVS-LLVLNARTMQELGRVNFTTPTPVPKCLHGWY 439
P+A +ED+GV+LSV++ + + LLVLNA+ + E+ R T PV HG +
Sbjct: 475 QPDALEEDDGVVLSVVVSPGAGQKPAYLLVLNAKDLSEIARAEVETNIPVT--FHGLF 530
Score = 82 (33.9 bits), Expect = 2.6e-61, Sum P(3) = 2.6e-61
Identities = 29/95 (30%), Positives = 46/95 (48%)
Query: 223 HVLDKTNGSVVH-RFQADSFFYLHIINAYEDTNDGIVVDICCYRN-PAMLDCMYREALK- 279
HV DK + +++ F H IN YED N ++VD+CC++ + + +Y L+
Sbjct: 290 HVADKKRRKYFNNKYRTSPFNLFHHINTYED-NGFLIVDLCCWKGFEFVYNYLYLANLRE 348
Query: 280 NIHSTPRYAQMFRARP--LRFRLDLASPRTAPTGK 312
N R A M +P R+ L L + A TG+
Sbjct: 349 NWEEVKRNA-MKAPQPEVRRYVLPLTIDK-ADTGR 381
>UNIPROTKB|Q8HXG8 [details] [associations]
symbol:BCO2 "Beta,beta-carotene 9',10'-oxygenase"
species:9541 "Macaca fascicularis" [GO:0016119 "carotene metabolic
process" evidence=ISS] [GO:0016702 "oxidoreductase activity, acting
on single donors with incorporation of molecular oxygen,
incorporation of two atoms of oxygen" evidence=ISS] GO:GO:0005739
GO:GO:0046872 GO:GO:0016702 HOVERGEN:HBG050679 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 EMBL:AB097557
ProteinModelPortal:Q8HXG8 GO:GO:0016119 Uniprot:Q8HXG8
Length = 556
Score = 343 (125.8 bits), Expect = 3.6e-61, Sum P(3) = 3.6e-61
Identities = 66/192 (34%), Positives = 114/192 (59%)
Query: 5 EVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQ 64
E + + V G P W++G L+R GPG + G++ ++H FD LLH+F+++ G VTY+
Sbjct: 40 EAPRGISARVWGHFPKWLNGSLLRIGPGKFEFGKDKYNHWFDGMALLHQFRMAKGTVTYR 99
Query: 65 CKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK-PG-----SDNTLVSV 118
KF++S++Y N A RIV++ FGT PDPC ++F+R + F+ PG +DNT V+
Sbjct: 100 SKFLQSDTYKANSAKNRIVMSEFGTLATPDPCKNVFERFMSRFELPGKAAAMTDNTNVNY 159
Query: 119 YPIQDQVYALGDSNYMHRIDPATLDTLGKIDLAGDVTILHQTSHPLTTSDGETFNLGVTL 178
+ Y ++N+M+++D TL+ K+D + + + T+HP DG +N+G +
Sbjct: 160 VRYKGDYYLCTETNFMNKVDIETLEKTEKVDWSKFIAVNGATAHPHYDPDGTAYNMGNSF 219
Query: 179 RPTGPRYCILQL 190
P G Y ++++
Sbjct: 220 GPFGFSYKVIRV 231
Score = 210 (79.0 bits), Expect = 3.6e-61, Sum P(3) = 3.6e-61
Identities = 50/122 (40%), Positives = 67/122 (54%)
Query: 322 GCETPRMN-GQHQGRSYTYFYAISADIDRDNPG-TLIKVNVQNNTCKSWSQKDVYPSEPV 379
G E P++ GQ G+ Y +FY R G +LIKV+V N T K W + YPSEPV
Sbjct: 439 GIEFPQIYYGQFSGKKYRFFYGCGF---RHLVGDSLIKVDVVNKTLKVWREDGFYPSEPV 495
Query: 380 FVATPNARKEDEGVLLSVLLWSHHPTRVSLLVLNARTMQELGRVNFTTPTPVPKCLHGWY 439
FV P +ED GV+LSV++ + LLVL+A+ +ELGR P +P HG +
Sbjct: 496 FVPVPGTNEEDGGVILSVVITPNQNESNFLLVLDAKNFEELGRAE--VPVQMPYGFHGTF 553
Query: 440 FP 441
P
Sbjct: 554 IP 555
Score = 115 (45.5 bits), Expect = 3.6e-61, Sum P(3) = 3.6e-61
Identities = 33/99 (33%), Positives = 51/99 (51%)
Query: 219 STIFHVLDKTNGSVVH-RFQADSFFYLHIINAYEDTNDGIVVDICCYRNPAMLDCMYREA 277
+T FHV+DK G ++ R+ + F H INA+ED +++D+CC N +L+ +Y+
Sbjct: 307 NTRFHVVDKHTGQLLPGRYYSKPFVAFHHINAFEDQGC-VIIDLCCQDNGRILE-VYQ-- 362
Query: 278 LKNIHSTPR-----YAQMFRARPLRFRLDLASPRTAPTG 311
L+N+ Y R+ P RF L L AP G
Sbjct: 363 LQNLRKAGEELDQVYNSAGRSFPRRFVLPLNVSLNAPEG 401
>UNIPROTKB|E2RS36 [details] [associations]
symbol:BCO2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000377 "regulation of reactive oxygen
species metabolic process" evidence=IEA] [GO:0051881 "regulation of
mitochondrial membrane potential" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016121 "carotene catabolic process"
evidence=IEA] [GO:0016116 "carotenoid metabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
GO:GO:0055114 GeneTree:ENSGT00500000044783 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 OMA:VSLNAPE GO:GO:0016121
EMBL:AAEX03003490 Ensembl:ENSCAFT00000022164 NextBio:20854619
Uniprot:E2RS36
Length = 575
Score = 359 (131.4 bits), Expect = 5.2e-61, Sum P(3) = 5.2e-61
Identities = 68/188 (36%), Positives = 112/188 (59%)
Query: 5 EVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQ 64
E+ Q V V G P W+ G L+R GPG + G++ + H FD LLH+F++ G VTY+
Sbjct: 63 EMPQMVSAQVRGQFPEWLSGYLLRIGPGKFEFGKDEYSHWFDGMALLHQFRMEKGTVTYR 122
Query: 65 CKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK-PG-SDNTLVSVYPIQ 122
KF++S++Y N A RIV++ FGT +PDPC ++F+R + F+ P +DNT V+ +
Sbjct: 123 SKFLQSDTYKANSAHDRIVISEFGTLALPDPCKNVFERFMSKFELPAITDNTNVNYVQYK 182
Query: 123 DQVYALGDSNYMHRIDPATLDTLGKIDLAGDVTILHQTSHPLTTSDGETFNLGVTLRPTG 182
Y ++N+M+++D TL+ K+D + + + T+HP DG +N+G + P G
Sbjct: 183 GDYYVSTETNFMNKVDIKTLEKTEKVDWSKFIAVNGATAHPHYDPDGTAYNMGNSYGPHG 242
Query: 183 PRYCILQL 190
Y ++Q+
Sbjct: 243 SCYNVIQI 250
Score = 208 (78.3 bits), Expect = 5.2e-61, Sum P(3) = 5.2e-61
Identities = 50/120 (41%), Positives = 66/120 (55%)
Query: 322 GCETPRMN-GQHQGRSYTYFYAISADIDRDNPG-TLIKVNVQNNTCKSWSQKDVYPSEPV 379
G E P++N GQ G+ Y +FY R G +LIKV+V N T W + YPSEPV
Sbjct: 458 GVEFPQINYGQFSGKKYRFFYGCGF---RHLVGDSLIKVDVVNKTLTIWREDGFYPSEPV 514
Query: 380 FVATPNARKEDEGVLLSVLLWSHHPTRVSLLVLNARTMQELGRVNFTTPTPVPKCLHGWY 439
FV P R+ED GV+LSV++ LLVL+A+ +ELGR P +P HG +
Sbjct: 515 FVPAPGTREEDGGVILSVVITPDQNENNFLLVLDAKNFEELGRAE--VPVRMPYGFHGTF 572
Score = 99 (39.9 bits), Expect = 5.2e-61, Sum P(3) = 5.2e-61
Identities = 31/100 (31%), Positives = 49/100 (49%)
Query: 219 STIFHVLDKTNGSVVH-RFQADSFFYLHIINAYEDTNDGIVVDICCYRNPAMLDCMYREA 277
+T FHV+DK G ++ + F H INA+ED +V+D+CC + L+ +Y+
Sbjct: 326 NTRFHVVDKHTGQLLPGMYYTKPFVTFHQINAFEDQGC-VVIDLCCQDDGRSLE-VYQ-- 381
Query: 278 LKNIHSTPR-----YAQMFRARPLRFRLDLASPRTAPTGK 312
L+N+ Y + R+ P RF L L P G+
Sbjct: 382 LQNLRKAGEGLDQVYNSVGRSFPRRFVLPLHVSLNDPEGE 421
>UNIPROTKB|Q16518 [details] [associations]
symbol:RPE65 "Retinoid isomerohydrolase" species:9606 "Homo
sapiens" [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0052884
"all-trans-retinyl-palmitate hydrolase, 11-cis retinol forming
activity" evidence=IEA] [GO:0052885 "all-trans-retinyl-ester
hydrolase, 11-cis retinol forming activity" evidence=IEA]
[GO:0004744 "retinal isomerase activity" evidence=IEA] [GO:0007468
"regulation of rhodopsin gene expression" evidence=IEA] [GO:0007601
"visual perception" evidence=IEA] [GO:0008286 "insulin receptor
signaling pathway" evidence=IEA] [GO:0042574 "retinal metabolic
process" evidence=IEA] [GO:0060042 "retina morphogenesis in
camera-type eye" evidence=IEA] [GO:0071257 "cellular response to
electrical stimulus" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0031090 "organelle membrane" evidence=IEA]
[GO:0006776 "vitamin A metabolic process" evidence=TAS]
GO:GO:0005783 GO:GO:0005886 GO:GO:0046872 EMBL:CH471059
GO:GO:0007601 Orphanet:791 GO:GO:0050896 GO:GO:0016853 Orphanet:65
GO:GO:0006776 eggNOG:COG3670 HOGENOM:HOG000232156
HOVERGEN:HBG050679 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 GO:GO:0031090 Orphanet:180 OrthoDB:EOG47M1XK
GO:GO:0052885 GO:GO:0052884 CTD:6121 KO:K11158 EMBL:U18991
EMBL:U20510 EMBL:U20476 EMBL:U20477 EMBL:U20478 EMBL:U20479
EMBL:U20481 EMBL:U20482 EMBL:U20484 EMBL:U20485 EMBL:U20486
EMBL:AF039868 EMBL:AF039855 EMBL:AF039856 EMBL:AF039857
EMBL:AF039858 EMBL:AF039859 EMBL:AF039860 EMBL:AF039861
EMBL:AF039862 EMBL:AF039863 EMBL:AF039864 EMBL:AF039865
EMBL:AF039866 EMBL:AF039867 EMBL:AL139413 EMBL:BC075035
EMBL:BC075036 IPI:IPI00029250 RefSeq:NP_000320.1 UniGene:Hs.2133
ProteinModelPortal:Q16518 SMR:Q16518 STRING:Q16518
PhosphoSite:Q16518 DMDM:44888872 PRIDE:Q16518
Ensembl:ENST00000262340 GeneID:6121 KEGG:hsa:6121 UCSC:uc001dei.1
GeneCards:GC01M068894 HGNC:HGNC:10294 MIM:180069 MIM:204100
MIM:613794 neXtProt:NX_Q16518 PharmGKB:PA34655 InParanoid:Q16518
OMA:WLHVADK PhylomeDB:Q16518 BioCyc:MetaCyc:ENSG00000116745-MONOMER
ChiTaRS:RPE65 GenomeRNAi:6121 NextBio:23773 ArrayExpress:Q16518
Bgee:Q16518 CleanEx:HS_RPE65 Genevestigator:Q16518
GermOnline:ENSG00000116745 Uniprot:Q16518
Length = 533
Score = 385 (140.6 bits), Expect = 6.8e-61, Sum P(3) = 6.8e-61
Identities = 72/173 (41%), Positives = 110/173 (63%)
Query: 5 EVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQ 64
E+ P+ V G IP W+ G L+R GPG + VG E F HLFD LLH+F G VTY
Sbjct: 21 ELSSPLTAHVTGRIPLWLTGSLLRCGPGLFEVGSEPFYHLFDGQALLHKFDFKEGHVTYH 80
Query: 65 CKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK--PGSDNTLVSVYPIQ 122
+FI++++Y++ +RIV+T FGT PDPC +IF R + F+ +DN LV+VYP+
Sbjct: 81 RRFIRTDAYVRAMTEKRIVITEFGTCAFPDPCKNIFSRFFSYFRGVEVTDNALVNVYPVG 140
Query: 123 DQVYALGDSNYMHRIDPATLDTLGKIDLAGDVTILHQTSHPLTTSDGETFNLG 175
+ YA ++N++ +I+P TL+T+ ++DL V++ T+HP +DG +N+G
Sbjct: 141 EDYYACTETNFITKINPETLETIKQVDLCNYVSVNGATAHPHIENDGTVYNIG 193
Score = 182 (69.1 bits), Expect = 6.8e-61, Sum P(3) = 6.8e-61
Identities = 43/118 (36%), Positives = 68/118 (57%)
Query: 324 ETPRMNGQ-HQGRSYTYFYAISADIDRDNPGTLIKVNVQNNTCKSWSQKDVYPSEPVFVA 382
E P++N Q + G+ YTY Y + ++ P L K+NV+ W + D YPSEP+FV+
Sbjct: 417 EFPQINYQKYCGKPYTYAYGLG--LNHFVPDRLCKLNVKTKETWVWQEPDSYPSEPIFVS 474
Query: 383 TPNARKEDEGVLLSVLLWSHHPTRVS-LLVLNARTMQELGRVNFTTPTPVPKCLHGWY 439
P+A +ED+GV+LSV++ + + LL+LNA+ + E+ R PV HG +
Sbjct: 475 HPDALEEDDGVVLSVVVSPGAGQKPAYLLILNAKDLSEVARAEVEINIPVT--FHGLF 530
Score = 86 (35.3 bits), Expect = 6.8e-61, Sum P(3) = 6.8e-61
Identities = 28/96 (29%), Positives = 46/96 (47%)
Query: 223 HVLDKTNGSVVH-RFQADSFFYLHIINAYEDTNDGIVVDICCYRN-PAMLDCMY----RE 276
H+ DK ++ +++ F H IN YED N ++VD+CC++ + + +Y RE
Sbjct: 290 HIADKKRKKYLNNKYRTSPFNLFHHINTYED-NGFLIVDLCCWKGFEFVYNYLYLANLRE 348
Query: 277 ALKNIHSTPRYAQMFRARPLRFRLDLASPRTAPTGK 312
+ + R A R R+ L L + A TGK
Sbjct: 349 NWEEVKKNARKAPQPEVR--RYVLPLNIDK-ADTGK 381
>MGI|MGI:1926923 [details] [associations]
symbol:Bcmo1 "beta-carotene 15,15'-monooxygenase"
species:10090 "Mus musculus" [GO:0001523 "retinoid metabolic
process" evidence=ISO;IDA] [GO:0003834 "beta-carotene
15,15'-monooxygenase activity" evidence=ISO;ISS;IDA] [GO:0004497
"monooxygenase activity" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=ISO;ISS;IDA] UniPathway:UPA00912 MGI:MGI:1926923
GO:GO:0046872 GO:GO:0004497 GO:GO:0042572 GO:GO:0001523 CTD:53630
eggNOG:COG3670 GeneTree:ENSGT00500000044783 HOGENOM:HOG000232156
HOVERGEN:HBG050679 KO:K00515 OMA:ITENYIV OrthoDB:EOG4G7BZ5
GO:GO:0003834 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
EMBL:AJ278064 EMBL:AF271298 EMBL:AF294899 EMBL:AY114302
EMBL:AY114294 EMBL:AY114295 EMBL:AY114296 EMBL:AY114297
EMBL:AY114298 EMBL:AY114299 EMBL:AY114300 EMBL:AY114301
EMBL:AK054171 IPI:IPI00122199 RefSeq:NP_067461.2 UniGene:Mm.174133
ProteinModelPortal:Q9JJS6 SMR:Q9JJS6 STRING:Q9JJS6
PhosphoSite:Q9JJS6 PRIDE:Q9JJS6 Ensembl:ENSMUST00000034308
GeneID:63857 KEGG:mmu:63857 InParanoid:Q9JJS6 BRENDA:1.14.99.36
NextBio:319783 Bgee:Q9JJS6 CleanEx:MM_BCMO1 Genevestigator:Q9JJS6
GermOnline:ENSMUSG00000031845 Uniprot:Q9JJS6
Length = 566
Score = 377 (137.8 bits), Expect = 1.7e-60, Sum P(3) = 1.7e-60
Identities = 78/195 (40%), Positives = 113/195 (57%)
Query: 1 QDNSEVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGL 60
Q+ E +PVQ V G IP+W+ G L+RNGPG VGE ++H FD LLH F I G
Sbjct: 7 QNKKEQLEPVQAKVTGSIPAWLQGTLLRNGPGMHTVGESKYNHWFDGLALLHSFSIRDGE 66
Query: 61 VTYQCKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK---PG-SDNTLV 116
V Y+ K+++S++YI N A RIVV+ FGT PDPC +IF + + P +DN L+
Sbjct: 67 VFYRSKYLQSDTYIANIEANRIVVSEFGTMAYPDPCKNIFSKAFSYLSHTIPDFTDNCLI 126
Query: 117 SVYPIQDQVYALGDSNYMHRIDPATLDTLGKIDLAGDVTILHQTSHPLTTSDGETFNLGV 176
++ + YA ++NY+ +IDP TL+TL K+D V + TSHP G N+G
Sbjct: 127 NIMKCGEDFYATTETNYIRKIDPQTLETLEKVDYRKYVAVNLATSHPHYDEAGNVLNMGT 186
Query: 177 TLRPTG-PRYCILQL 190
++ G +Y I ++
Sbjct: 187 SVVDKGRTKYVIFKI 201
Score = 193 (73.0 bits), Expect = 1.7e-60, Sum P(3) = 1.7e-60
Identities = 43/130 (33%), Positives = 76/130 (58%)
Query: 314 RPSVICDVGCETPRMNGQHQGRSYTYFYAISADIDRDN-PGTLIKVNVQNNTCKSWSQKD 372
+P V+ + G E PR+N + G+ Y Y +A A++ P ++K ++ + WS++
Sbjct: 396 QPEVLYE-GLELPRINYAYNGKPYRYIFA--AEVQWSPVPTKILKYDILTKSSLKWSEES 452
Query: 373 VYPSEPVFVATPNARKEDEGVLLSVLLWSHHPTRVS-LLVLNARTMQELGRVNFTTPTPV 431
+P+EP+FV TP A+ ED+GV+LS ++ S P ++ LL+L+A++ EL R + +
Sbjct: 453 CWPAEPLFVPTPGAKDEDDGVILSAIV-STDPQKLPFLLILDAKSFTELARASVDADMHL 511
Query: 432 PKCLHGWYFP 441
LHG + P
Sbjct: 512 D--LHGLFIP 519
Score = 85 (35.0 bits), Expect = 1.7e-60, Sum P(3) = 1.7e-60
Identities = 27/95 (28%), Positives = 42/95 (44%)
Query: 220 TIFHVLD-KTNGSVVHRFQADSFFYLHIINAYEDTNDGIVV-DICCYRNPAMLDCMYREA 277
T H++D +T V +F D H +NAYE+ DG V+ D+ Y + ++ Y
Sbjct: 282 TYIHIIDQRTRKPVPTKFYTDPMVVFHHVNAYEE--DGCVLFDVIAYEDSSLYQLFYLAN 339
Query: 278 L-KNIHSTPRYAQMFRARPLRFRLDLASPRTAPTG 311
L K+ R + R RF + L + A G
Sbjct: 340 LNKDFEEKSRLTSVPTLR--RFAVPLHVDKDAEVG 372
>UNIPROTKB|Q28175 [details] [associations]
symbol:RPE65 "Retinoid isomerohydrolase" species:9913 "Bos
taurus" [GO:0031090 "organelle membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0071257 "cellular response to
electrical stimulus" evidence=IEA] [GO:0060042 "retina
morphogenesis in camera-type eye" evidence=IEA] [GO:0042574
"retinal metabolic process" evidence=IEA] [GO:0008286 "insulin
receptor signaling pathway" evidence=IEA] [GO:0007601 "visual
perception" evidence=IEA] [GO:0007468 "regulation of rhodopsin gene
expression" evidence=IEA] [GO:0004744 "retinal isomerase activity"
evidence=IEA] [GO:0052885 "all-trans-retinyl-ester hydrolase,
11-cis retinol forming activity" evidence=IEA] [GO:0052884
"all-trans-retinyl-palmitate hydrolase, 11-cis retinol forming
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
GO:GO:0005783 GO:GO:0005886 GO:GO:0046872 GO:GO:0007601
GO:GO:0050896 GO:GO:0016853 eggNOG:COG3670
GeneTree:ENSGT00500000044783 HOGENOM:HOG000232156
HOVERGEN:HBG050679 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 GO:GO:0031090 OrthoDB:EOG47M1XK GO:GO:0052885
GO:GO:0052884 EMBL:L11356 EMBL:X66277 IPI:IPI00711777 PIR:A47143
RefSeq:NP_776878.1 UniGene:Bt.108 PDB:3FSN PDB:3KVC PDB:4F2Z
PDB:4F30 PDB:4F3A PDB:4F3D PDBsum:3FSN PDBsum:3KVC PDBsum:4F2Z
PDBsum:4F30 PDBsum:4F3A PDBsum:4F3D ProteinModelPortal:Q28175
DIP:DIP-48993N STRING:Q28175 PRIDE:Q28175
Ensembl:ENSBTAT00000043702 GeneID:282043 KEGG:bta:282043 CTD:6121
InParanoid:Q28175 KO:K11158 BRENDA:5.2.1.7 EvolutionaryTrace:Q28175
NextBio:20805904 Uniprot:Q28175
Length = 533
Score = 383 (139.9 bits), Expect = 1.8e-60, Sum P(3) = 1.8e-60
Identities = 70/173 (40%), Positives = 110/173 (63%)
Query: 5 EVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQ 64
E+ P+ V G IP W+ G L+R GPG + VG E F HLFD LLH+F G VTY
Sbjct: 21 ELSSPLTAHVTGRIPLWLTGSLLRCGPGLFEVGSEPFYHLFDGQALLHKFDFKEGHVTYH 80
Query: 65 CKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK--PGSDNTLVSVYPIQ 122
+FI++++Y++ +RIV+T FGT PDPC +IF R + F+ +DN LV++YP+
Sbjct: 81 RRFIRTDAYVRAMTEKRIVITEFGTCAFPDPCKNIFSRFFSYFRGVEVTDNALVNIYPVG 140
Query: 123 DQVYALGDSNYMHRIDPATLDTLGKIDLAGDVTILHQTSHPLTTSDGETFNLG 175
+ YA ++N++ +++P TL+T+ ++DL V++ T+HP +DG +N+G
Sbjct: 141 EDYYACTETNFITKVNPETLETIKQVDLCNYVSVNGATAHPHIENDGTVYNIG 193
Score = 183 (69.5 bits), Expect = 1.8e-60, Sum P(3) = 1.8e-60
Identities = 43/118 (36%), Positives = 68/118 (57%)
Query: 324 ETPRMNGQ-HQGRSYTYFYAISADIDRDNPGTLIKVNVQNNTCKSWSQKDVYPSEPVFVA 382
E P++N Q + G+ YTY Y + ++ P L K+NV+ W + D YPSEP+FV+
Sbjct: 417 EFPQINYQKYGGKPYTYAYGLG--LNHFVPDRLCKLNVKTKETWVWQEPDSYPSEPIFVS 474
Query: 383 TPNARKEDEGVLLSVLLWSHHPTRVS-LLVLNARTMQELGRVNFTTPTPVPKCLHGWY 439
P+A +ED+GV+LSV++ + + LL+LNA+ + E+ R PV HG +
Sbjct: 475 HPDALEEDDGVVLSVVVSPGAGQKPAYLLILNAKDLSEVARAEVEINIPVT--FHGLF 530
Score = 83 (34.3 bits), Expect = 1.8e-60, Sum P(3) = 1.8e-60
Identities = 27/96 (28%), Positives = 46/96 (47%)
Query: 223 HVLDKTNGSVVH-RFQADSFFYLHIINAYEDTNDGIVVDICCYRN-PAMLDCMY----RE 276
H+ DK ++ +++ F H IN YED ++ ++VD+CC++ + + Y RE
Sbjct: 290 HIADKKRKKYINNKYRTSPFNLFHHINTYED-HEFLIVDLCCWKGFEFVYNYSYLANLRE 348
Query: 277 ALKNIHSTPRYAQMFRARPLRFRLDLASPRTAPTGK 312
+ + R A R R+ L L + A TGK
Sbjct: 349 NWEEVKKNARKAPQPEVR--RYVLPLNIDK-ADTGK 381
>ZFIN|ZDB-GENE-040426-1717 [details] [associations]
symbol:rpe65a "retinal pigment epithelium-specific
protein 65a" species:7955 "Danio rerio" [GO:0052884
"all-trans-retinyl-palmitate hydrolase, 11-cis retinol forming
activity" evidence=IEA] [GO:0052885 "all-trans-retinyl-ester
hydrolase, 11-cis retinol forming activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0050896 "response to stimulus"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
ZFIN:ZDB-GENE-040426-1717 GO:GO:0005886 GO:GO:0005737 GO:GO:0046872
GO:GO:0007601 GO:GO:0050896 eggNOG:COG3670
GeneTree:ENSGT00500000044783 HOGENOM:HOG000232156
HOVERGEN:HBG050679 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 EMBL:AY646886 EMBL:FP102801 EMBL:BC059559
IPI:IPI00485811 RefSeq:NP_957045.1 UniGene:Dr.12451
ProteinModelPortal:Q6PBW5 STRING:Q6PBW5 Ensembl:ENSDART00000004533
GeneID:393724 KEGG:dre:393724 CTD:393724 InParanoid:Q6PBW5
OMA:TSMEFPR OrthoDB:EOG47M1XK NextBio:20814725 Bgee:Q6PBW5
GO:GO:0052885 GO:GO:0052884 Uniprot:Q6PBW5
Length = 531
Score = 391 (142.7 bits), Expect = 3.7e-60, Sum P(3) = 3.7e-60
Identities = 76/173 (43%), Positives = 113/173 (65%)
Query: 5 EVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQ 64
E+++P+ TV G IPS+I G L+R GPG + G E F HLFD L+H+F S+G VTY
Sbjct: 21 ELNEPLPATVTGRIPSFIKGSLLRLGPGLFEAGAEPFYHLFDGQALMHKFDFSNGQVTYF 80
Query: 65 CKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK--PGSDNTLVSVYPIQ 122
KF+K+++Y++ +R+V+T FGT PDPC +IF R + FK +DN LV+VYPI
Sbjct: 81 RKFVKTDAYVRAITEKRVVITEFGTCAYPDPCKNIFSRFFSYFKGVEVTDNCLVNVYPIG 140
Query: 123 DQVYALGDSNYMHRIDPATLDTLGKIDLAGDVTILHQTSHPLTTSDGETFNLG 175
+ YA+ ++NY+ +++ TL+TL K+D+ V I T+HP DG +N+G
Sbjct: 141 EDFYAVTETNYITKVNVDTLETLKKVDMCNYVNINGVTAHPHIERDGTVYNIG 193
Score = 185 (70.2 bits), Expect = 3.7e-60, Sum P(3) = 3.7e-60
Identities = 42/121 (34%), Positives = 68/121 (56%)
Query: 324 ETPRMNGQH-QGRSYTYFYAISADIDRDNPGTLIKVNVQNNTCKSWSQKDVYPSEPVFVA 382
E P++N + G++YTY Y + ++ P + K+NV+ W + D YPSEP+FV
Sbjct: 417 EFPQINYRMVNGKNYTYAYGLG--LNHFVPDRICKLNVRTKETWVWQEPDSYPSEPLFVQ 474
Query: 383 TPNARKEDEGVLLSVLL--WSHHPTRVSLLVLNARTMQELGRVNFTTPTPVPKCLHGWYF 440
TP+ ED+G+L+++++ + PT L+LNA+ + E+ R TPV HG Y
Sbjct: 475 TPDGVDEDDGILMTIVVSPGAQRPTYC--LILNAKDLSEIARAEVEILTPVT--FHGMYK 530
Query: 441 P 441
P
Sbjct: 531 P 531
Score = 70 (29.7 bits), Expect = 3.7e-60, Sum P(3) = 3.7e-60
Identities = 17/56 (30%), Positives = 28/56 (50%)
Query: 211 FRDDIDMTSTIFHVLDKTNGSVV-HRFQADSFFYLHIINAYEDTNDGIVVDICCYR 265
F D + T H+ K G + ++F+ + H IN YED+ IV D+C ++
Sbjct: 279 FESD-EEKGTWIHIARKHPGEYIDYKFRTSAMGLFHHINCYEDSGF-IVFDLCAWK 332
>UNIPROTKB|F1SM94 [details] [associations]
symbol:BCO2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000377 "regulation of reactive oxygen species
metabolic process" evidence=IEA] [GO:0051881 "regulation of
mitochondrial membrane potential" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016121 "carotene catabolic process"
evidence=IEA] [GO:0016116 "carotenoid metabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
GO:GO:0055114 GeneTree:ENSGT00500000044783 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 CTD:83875 KO:K10252 OMA:VSLNAPE
GO:GO:0016121 EMBL:CU657951 RefSeq:XP_003129902.2 UniGene:Ssc.25348
Ensembl:ENSSSCT00000016405 GeneID:100517547 KEGG:ssc:100517547
Uniprot:F1SM94
Length = 575
Score = 340 (124.7 bits), Expect = 3.8e-60, Sum P(3) = 3.8e-60
Identities = 66/188 (35%), Positives = 111/188 (59%)
Query: 5 EVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQ 64
E + + V G +P W++G L+R GPG + G++ ++H FD LLH+FKI G V Y+
Sbjct: 63 ETPKIISAQVRGHVPKWLNGYLLRIGPGKFEFGKDKYNHWFDGMALLHQFKIEKGTVMYR 122
Query: 65 CKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK-PG-SDNTLVSVYPIQ 122
KF++S++Y N RIVV+ FGT +PDPC +IF+R + F+ P +DNT V+ +
Sbjct: 123 SKFLQSDTYKANSVHDRIVVSEFGTLALPDPCKNIFERFMSKFELPAMTDNTNVNYVQYK 182
Query: 123 DQVYALGDSNYMHRIDPATLDTLGKIDLAGDVTILHQTSHPLTTSDGETFNLGVTLRPTG 182
Y ++N+M+++D TL+ K+D + + + T+HP DG +N+G + G
Sbjct: 183 GDYYLSTETNFMNKVDIETLEKKEKVDWSKFIAVNGATAHPHYDPDGTAYNMGNSFGSHG 242
Query: 183 PRYCILQL 190
Y ++++
Sbjct: 243 SCYHVIRV 250
Score = 213 (80.0 bits), Expect = 3.8e-60, Sum P(3) = 3.8e-60
Identities = 49/120 (40%), Positives = 68/120 (56%)
Query: 322 GCETPRMN-GQHQGRSYTYFYAISADIDRDNPG-TLIKVNVQNNTCKSWSQKDVYPSEPV 379
G E P++N GQ G+ Y +FY R G +LIKV+V N T W ++ YPSEP+
Sbjct: 458 GVEFPQINYGQFSGKKYRFFYGCGF---RHLVGDSLIKVDVVNKTLTVWREESFYPSEPI 514
Query: 380 FVATPNARKEDEGVLLSVLLWSHHPTRVSLLVLNARTMQELGRVNFTTPTPVPKCLHGWY 439
FV P +ED GV+LSV++ + R LLVL+A+ +ELGR P +P HG +
Sbjct: 515 FVPVPGTNEEDGGVILSVVITPNQNERNFLLVLDAKNFEELGRAE--VPVQMPYGFHGTF 572
Score = 108 (43.1 bits), Expect = 3.8e-60, Sum P(3) = 3.8e-60
Identities = 32/100 (32%), Positives = 52/100 (52%)
Query: 219 STIFHVLDKTNGSVVH-RFQADSFFYLHIINAYEDTNDGIVVDICCYRNPAMLDCMYREA 277
+T FHV+DK G ++ + + F H INA+ED +V+D+CC + L+ +Y+
Sbjct: 326 NTRFHVVDKHTGQLLPGMYYSKPFVTFHQINAFEDQGC-VVIDLCCQDDGRNLE-VYQ-- 381
Query: 278 LKNIHSTPR-----YAQMFRARPLRFRLDLASPRTAPTGK 312
L+N+ + Y + R+ P RF L L AP G+
Sbjct: 382 LQNLRKAGKGLDQAYNSVARSFPRRFVLPLHVSLNAPEGE 421
>RGD|70981 [details] [associations]
symbol:Bcmo1 "beta-carotene 15,15'-monooxygenase 1" species:10116
"Rattus norvegicus" [GO:0001523 "retinoid metabolic process"
evidence=IEA;ISO;IDA] [GO:0003834 "beta-carotene
15,15'-monooxygenase activity" evidence=IEA;ISO;IDA] [GO:0004497
"monooxygenase activity" evidence=IEA] [GO:0042572 "retinol
metabolic process" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=ISO] UniPathway:UPA00912 RGD:70981 GO:GO:0046872
GO:GO:0004497 GO:GO:0042572 GO:GO:0001523 CTD:53630 eggNOG:COG3670
HOGENOM:HOG000232156 HOVERGEN:HBG050679 KO:K00515 OrthoDB:EOG4G7BZ5
GO:GO:0003834 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
EMBL:AB062912 IPI:IPI00208162 RefSeq:NP_446100.1 UniGene:Rn.126587
STRING:Q91XT5 PRIDE:Q91XT5 GeneID:114106 KEGG:rno:114106
UCSC:RGD:70981 InParanoid:Q91XT5 NextBio:618281
Genevestigator:Q91XT5 GermOnline:ENSRNOG00000012027 Uniprot:Q91XT5
Length = 566
Score = 362 (132.5 bits), Expect = 1.5e-59, Sum P(3) = 1.5e-59
Identities = 73/195 (37%), Positives = 113/195 (57%)
Query: 1 QDNSEVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGL 60
++ E +P++ TV G IP+W+ G L+RNGPG VG+ ++H FD LLH F I G
Sbjct: 7 RNKKEQLEPLRATVTGSIPAWLQGTLLRNGPGMHTVGDSKYNHWFDGLALLHSFSIRDGE 66
Query: 61 VTYQCKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK---PG-SDNTLV 116
V Y+ K+++S++Y N A RIVV+ FGT PDPC +IF + + P +DN L+
Sbjct: 67 VFYRSKYLQSDTYNANIEANRIVVSEFGTMAYPDPCKNIFSKAFSYLSHTIPDFTDNCLI 126
Query: 117 SVYPIQDQVYALGDSNYMHRIDPATLDTLGKIDLAGDVTILHQTSHPLTTSDGETFNLGV 176
++ + YA ++NY+ +IDP TL+TL K+D V + TSHP G N+G
Sbjct: 127 NIMKCGEDFYATTETNYIRKIDPQTLETLEKVDYRKYVAVNLATSHPHYDEAGNVLNMGT 186
Query: 177 TLRPTG-PRYCILQL 190
++ G +Y + ++
Sbjct: 187 SIADKGGTKYVMFKI 201
Score = 201 (75.8 bits), Expect = 1.5e-59, Sum P(3) = 1.5e-59
Identities = 45/130 (34%), Positives = 76/130 (58%)
Query: 314 RPSVICDVGCETPRMNGQHQGRSYTYFYAISADIDRDN-PGTLIKVNVQNNTCKSWSQKD 372
+P V+ + G E PR+N H G+ Y Y +A A++ P ++K +V + WS++
Sbjct: 396 QPEVLYE-GLELPRINYAHNGKPYRYIFA--AEVQWSPVPTKILKYDVLTKSSLKWSEES 452
Query: 373 VYPSEPVFVATPNARKEDEGVLLSVLLWSHHPTRVS-LLVLNARTMQELGRVNFTTPTPV 431
+P+EP+FV TP A+ ED+GV+LS ++ S P ++ LL+L+A++ EL R + +
Sbjct: 453 CWPAEPLFVPTPGAKDEDDGVILSAII-STDPQKLPFLLILDAKSFTELARASVDVDMHL 511
Query: 432 PKCLHGWYFP 441
LHG + P
Sbjct: 512 D--LHGLFIP 519
Score = 87 (35.7 bits), Expect = 1.5e-59, Sum P(3) = 1.5e-59
Identities = 28/95 (29%), Positives = 42/95 (44%)
Query: 220 TIFHVLD-KTNGSVVHRFQADSFFYLHIINAYEDTNDGIVV-DICCYRNPAMLDCMYREA 277
T H++D KT V +F D H +NAYE+ DG V+ D+ Y + ++ Y
Sbjct: 282 TYIHIIDQKTRKPVPTKFYTDPMVVFHHVNAYEE--DGCVLFDVIAYEDNSLYQLFYLAN 339
Query: 278 L-KNIHSTPRYAQMFRARPLRFRLDLASPRTAPTG 311
L K+ R + R RF + L + A G
Sbjct: 340 LNKDFEEKSRLTSVPTLR--RFAVPLHVDKDAEVG 372
Score = 38 (18.4 bits), Expect = 1.6e-42, Sum P(3) = 1.6e-42
Identities = 18/78 (23%), Positives = 33/78 (42%)
Query: 341 YAISADIDRD-NPGTLIKVNVQNNTCKSWSQKD--VYPSEPVF---VATPNARKEDEG-- 392
+A+ +D+D G+ + V V + T + +KD VY V + P G
Sbjct: 359 FAVPLHVDKDAEVGSNL-VKVSSTTATALKEKDDHVYCQPEVLYEGLELPRINYAHNGKP 417
Query: 393 ---VLLSVLLWSHHPTRV 407
+ + + WS PT++
Sbjct: 418 YRYIFAAEVQWSPVPTKI 435
>UNIPROTKB|Q91XT5 [details] [associations]
symbol:Bcmo1 "Beta,beta-carotene 15,15'-monooxygenase"
species:10116 "Rattus norvegicus" [GO:0004497 "monooxygenase
activity" evidence=IEA] UniPathway:UPA00912 RGD:70981 GO:GO:0046872
GO:GO:0004497 GO:GO:0042572 GO:GO:0001523 CTD:53630 eggNOG:COG3670
HOGENOM:HOG000232156 HOVERGEN:HBG050679 KO:K00515 OrthoDB:EOG4G7BZ5
GO:GO:0003834 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
EMBL:AB062912 IPI:IPI00208162 RefSeq:NP_446100.1 UniGene:Rn.126587
STRING:Q91XT5 PRIDE:Q91XT5 GeneID:114106 KEGG:rno:114106
UCSC:RGD:70981 InParanoid:Q91XT5 NextBio:618281
Genevestigator:Q91XT5 GermOnline:ENSRNOG00000012027 Uniprot:Q91XT5
Length = 566
Score = 362 (132.5 bits), Expect = 1.5e-59, Sum P(3) = 1.5e-59
Identities = 73/195 (37%), Positives = 113/195 (57%)
Query: 1 QDNSEVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGL 60
++ E +P++ TV G IP+W+ G L+RNGPG VG+ ++H FD LLH F I G
Sbjct: 7 RNKKEQLEPLRATVTGSIPAWLQGTLLRNGPGMHTVGDSKYNHWFDGLALLHSFSIRDGE 66
Query: 61 VTYQCKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK---PG-SDNTLV 116
V Y+ K+++S++Y N A RIVV+ FGT PDPC +IF + + P +DN L+
Sbjct: 67 VFYRSKYLQSDTYNANIEANRIVVSEFGTMAYPDPCKNIFSKAFSYLSHTIPDFTDNCLI 126
Query: 117 SVYPIQDQVYALGDSNYMHRIDPATLDTLGKIDLAGDVTILHQTSHPLTTSDGETFNLGV 176
++ + YA ++NY+ +IDP TL+TL K+D V + TSHP G N+G
Sbjct: 127 NIMKCGEDFYATTETNYIRKIDPQTLETLEKVDYRKYVAVNLATSHPHYDEAGNVLNMGT 186
Query: 177 TLRPTG-PRYCILQL 190
++ G +Y + ++
Sbjct: 187 SIADKGGTKYVMFKI 201
Score = 201 (75.8 bits), Expect = 1.5e-59, Sum P(3) = 1.5e-59
Identities = 45/130 (34%), Positives = 76/130 (58%)
Query: 314 RPSVICDVGCETPRMNGQHQGRSYTYFYAISADIDRDN-PGTLIKVNVQNNTCKSWSQKD 372
+P V+ + G E PR+N H G+ Y Y +A A++ P ++K +V + WS++
Sbjct: 396 QPEVLYE-GLELPRINYAHNGKPYRYIFA--AEVQWSPVPTKILKYDVLTKSSLKWSEES 452
Query: 373 VYPSEPVFVATPNARKEDEGVLLSVLLWSHHPTRVS-LLVLNARTMQELGRVNFTTPTPV 431
+P+EP+FV TP A+ ED+GV+LS ++ S P ++ LL+L+A++ EL R + +
Sbjct: 453 CWPAEPLFVPTPGAKDEDDGVILSAII-STDPQKLPFLLILDAKSFTELARASVDVDMHL 511
Query: 432 PKCLHGWYFP 441
LHG + P
Sbjct: 512 D--LHGLFIP 519
Score = 87 (35.7 bits), Expect = 1.5e-59, Sum P(3) = 1.5e-59
Identities = 28/95 (29%), Positives = 42/95 (44%)
Query: 220 TIFHVLD-KTNGSVVHRFQADSFFYLHIINAYEDTNDGIVV-DICCYRNPAMLDCMYREA 277
T H++D KT V +F D H +NAYE+ DG V+ D+ Y + ++ Y
Sbjct: 282 TYIHIIDQKTRKPVPTKFYTDPMVVFHHVNAYEE--DGCVLFDVIAYEDNSLYQLFYLAN 339
Query: 278 L-KNIHSTPRYAQMFRARPLRFRLDLASPRTAPTG 311
L K+ R + R RF + L + A G
Sbjct: 340 LNKDFEEKSRLTSVPTLR--RFAVPLHVDKDAEVG 372
Score = 38 (18.4 bits), Expect = 1.6e-42, Sum P(3) = 1.6e-42
Identities = 18/78 (23%), Positives = 33/78 (42%)
Query: 341 YAISADIDRD-NPGTLIKVNVQNNTCKSWSQKD--VYPSEPVF---VATPNARKEDEG-- 392
+A+ +D+D G+ + V V + T + +KD VY V + P G
Sbjct: 359 FAVPLHVDKDAEVGSNL-VKVSSTTATALKEKDDHVYCQPEVLYEGLELPRINYAHNGKP 417
Query: 393 ---VLLSVLLWSHHPTRV 407
+ + + WS PT++
Sbjct: 418 YRYIFAAEVQWSPVPTKI 435
>UNIPROTKB|Q9BYV7 [details] [associations]
symbol:BCO2 "Beta,beta-carotene 9',10'-oxygenase"
species:9606 "Homo sapiens" [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0016119 "carotene metabolic process"
evidence=IDA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IDA] [GO:0042573 "retinoic acid
metabolic process" evidence=NAS] [GO:0042574 "retinal metabolic
process" evidence=NAS] [GO:0005622 "intracellular" evidence=IC]
[GO:0055114 "oxidation-reduction process" evidence=IDA] [GO:0016121
"carotene catabolic process" evidence=IDA] [GO:0005739
"mitochondrion" evidence=ISS;TAS] [GO:0016116 "carotenoid metabolic
process" evidence=ISS] [GO:0051881 "regulation of mitochondrial
membrane potential" evidence=ISS] [GO:2000377 "regulation of
reactive oxygen species metabolic process" evidence=ISS]
GO:GO:0005739 GO:GO:0046872 GO:GO:0051881 GO:GO:0016702
GO:GO:0042573 GO:GO:0042574 eggNOG:COG3670 HOGENOM:HOG000232156
HOVERGEN:HBG050679 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 EMBL:AF276432 EMBL:AK027801 EMBL:EF444956
EMBL:AP002884 EMBL:AJ290393 IPI:IPI00472555 IPI:IPI00479961
IPI:IPI00978312 RefSeq:NP_001032367.2 RefSeq:NP_001243326.1
UniGene:Hs.728325 ProteinModelPortal:Q9BYV7 SMR:Q9BYV7
STRING:Q9BYV7 PhosphoSite:Q9BYV7 DMDM:308153680 PaxDb:Q9BYV7
PRIDE:Q9BYV7 Ensembl:ENST00000357685 Ensembl:ENST00000393032
Ensembl:ENST00000438022 Ensembl:ENST00000526088
Ensembl:ENST00000531169 GeneID:83875 KEGG:hsa:83875 UCSC:uc001pne.1
UCSC:uc009yyn.3 CTD:83875 GeneCards:GC11P112046 HGNC:HGNC:18503
HPA:HPA039825 HPA:HPA040695 MIM:611740 neXtProt:NX_Q9BYV7
PharmGKB:PA162377424 InParanoid:Q9BYV7 KO:K10252 OMA:VSLNAPE
OrthoDB:EOG45B1FD BioCyc:MetaCyc:G66-33846-MONOMER ChiTaRS:BCO2
GenomeRNAi:83875 NextBio:72911 ArrayExpress:Q9BYV7 Bgee:Q9BYV7
CleanEx:HS_BCO2 Genevestigator:Q9BYV7 GermOnline:ENSG00000197580
GO:GO:0016121 GO:GO:0016116 GO:GO:2000377 Uniprot:Q9BYV7
Length = 579
Score = 345 (126.5 bits), Expect = 1.0e-58, Sum P(3) = 1.0e-58
Identities = 66/192 (34%), Positives = 115/192 (59%)
Query: 5 EVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQ 64
E + + V G P W++G L+R GPG + G++ ++H FD LLH+F+++ G VTY+
Sbjct: 63 EAPRGISARVWGHFPKWLNGSLLRIGPGKFEFGKDKYNHWFDGMALLHQFRMAKGTVTYR 122
Query: 65 CKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK-PG-----SDNTLVSV 118
KF++S++Y N A RIV++ FGT +PDPC ++F+R + F+ PG +DNT V+
Sbjct: 123 SKFLQSDTYKANSAKNRIVISEFGTLALPDPCKNVFERFMSRFELPGKAAAMTDNTNVNY 182
Query: 119 YPIQDQVYALGDSNYMHRIDPATLDTLGKIDLAGDVTILHQTSHPLTTSDGETFNLGVTL 178
+ Y ++N+M+++D TL+ K+D + + + T+HP DG +N+G +
Sbjct: 183 VRYKGDYYLCTETNFMNKVDIETLEKTEKVDWSKFIAVNGATAHPHYDLDGTAYNMGNSF 242
Query: 179 RPTGPRYCILQL 190
P G Y ++++
Sbjct: 243 GPYGFSYKVIRV 254
Score = 196 (74.1 bits), Expect = 1.0e-58, Sum P(3) = 1.0e-58
Identities = 47/122 (38%), Positives = 66/122 (54%)
Query: 322 GCETPRMN-GQHQGRSYTYFYAISADIDRDNPG-TLIKVNVQNNTCKSWSQKDVYPSEPV 379
G E P++ + G+ Y +FY R G +LIKV+V N T K W + YPSEPV
Sbjct: 462 GIEFPQIYYDRFSGKKYHFFYGCGF---RHLVGDSLIKVDVVNKTLKVWREDGFYPSEPV 518
Query: 380 FVATPNARKEDEGVLLSVLLWSHHPTRVSLLVLNARTMQELGRVNFTTPTPVPKCLHGWY 439
FV P +ED GV+LSV++ + +LVL+A+ +ELGR P +P HG +
Sbjct: 519 FVPAPGTNEEDGGVILSVVITPNQNESNFILVLDAKNFEELGRAE--VPVQMPYGFHGTF 576
Query: 440 FP 441
P
Sbjct: 577 IP 578
Score = 106 (42.4 bits), Expect = 1.0e-58, Sum P(3) = 1.0e-58
Identities = 33/102 (32%), Positives = 52/102 (50%)
Query: 219 STIFHVLDKTNGSVVH-RFQADSFFYLHIINAYEDTNDGIVVDICCYRNPAMLDCMYR-- 275
+T FHV++K G ++ R+ + F H INA+ED +++D+CC N L+ +Y+
Sbjct: 330 NTRFHVVEKRTGQLLPGRYYSKPFVTFHQINAFEDQGC-VIIDLCCQDNGRTLE-VYQLQ 387
Query: 276 ------EALKNIHSTPRYAQMFRARPLRFRLDLASPRTAPTG 311
E L +H++ A+ F P RF L L AP G
Sbjct: 388 NLRKAGEGLDQVHNSA--AKSF---PRRFVLPLNVSLNAPEG 424
>UNIPROTKB|F1N2Z9 [details] [associations]
symbol:BCO2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000377 "regulation of reactive oxygen species
metabolic process" evidence=IEA] [GO:0051881 "regulation of
mitochondrial membrane potential" evidence=IEA] [GO:0016702
"oxidoreductase activity, acting on single donors with
incorporation of molecular oxygen, incorporation of two atoms of
oxygen" evidence=IEA] [GO:0016121 "carotene catabolic process"
evidence=IEA] [GO:0016116 "carotenoid metabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
GO:GO:0055114 GeneTree:ENSGT00500000044783 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 GO:GO:0016121 EMBL:DAAA02040291
EMBL:DAAA02040290 IPI:IPI00729522 Ensembl:ENSBTAT00000048395
OMA:ICSIASE Uniprot:F1N2Z9
Length = 530
Score = 350 (128.3 bits), Expect = 9.7e-58, Sum P(3) = 9.7e-58
Identities = 73/232 (31%), Positives = 125/232 (53%)
Query: 5 EVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQ 64
E Q + V+G P W+ G L+R GPG + G++ ++H FD LLH+FK+ G VTY+
Sbjct: 41 ETPQVISAGVQGHFPEWLSGYLLRVGPGKFEFGKDKYNHWFDGMALLHQFKVEKGTVTYR 100
Query: 65 CKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLF-KPG-SDNTLVSVYPIQ 122
KF++S++Y N RIV++ FGT +PDPC ++F+R + F KP +DNT V+ +
Sbjct: 101 SKFLQSDTYKANSDRDRIVISEFGTLALPDPCKNVFERFMSKFEKPAITDNTNVNYVLYK 160
Query: 123 DQVYALGDSNYMHRIDPATLDTLGKIDLAGDVTILHQTSHPLTTSDGETFNLGVTLRPTG 182
Y ++N+M+++D TL+ K++ + + T+HP DG T+N+G + G
Sbjct: 161 GDYYLSTETNFMNKVDIETLEKTEKVNWTKFIAVNGATAHPHYDPDGTTYNMGNSYGKHG 220
Query: 183 PRYCILQLNDAFSYP-DLSHXXXXXXSLRFRDDIDMTSTIFHVLDKTNGSVV 233
Y ++++ S P + H S+ + M + +H T ++
Sbjct: 221 SCYNVIRVPPEKSDPGETIHGAQVICSIASEEG--MRPSYYHSFGMTRNYII 270
Score = 165 (63.1 bits), Expect = 9.7e-58, Sum P(3) = 9.7e-58
Identities = 37/78 (47%), Positives = 49/78 (62%)
Query: 324 ETPRMN-GQHQGRSYTYFYAISADIDRDNPG-TLIKVNVQNNTCKSWSQKDVYPSEPVFV 381
E P++N GQ G+ Y +FY R G +LIKV+V N T + W + YPSEPVFV
Sbjct: 438 EFPQINYGQFNGKKYQFFYGCGF---RHLVGDSLIKVDVVNKTRRVWREDGFYPSEPVFV 494
Query: 382 ATPNARKEDEGVLLSVLL 399
P A KED+GV+LSV++
Sbjct: 495 PVPGASKEDDGVILSVVI 512
Score = 114 (45.2 bits), Expect = 9.7e-58, Sum P(3) = 9.7e-58
Identities = 33/100 (33%), Positives = 53/100 (53%)
Query: 219 STIFHVLDKTNGSVVH-RFQADSFFYLHIINAYEDTNDGIVVDICCYRNPAMLDCMYREA 277
+T FHV+DK G ++ + + F H INA+ED +V+D+CC + +L+ +Y+
Sbjct: 304 NTRFHVVDKHTGQLLPGMYFSKPFVTFHQINAFEDQGC-VVIDLCCQDDGGILE-VYQ-- 359
Query: 278 LKNIHSTPR-----YAQMFRARPLRFRLDLASPRTAPTGK 312
L+N+ T + Y + R P RF L L AP G+
Sbjct: 360 LQNLRKTGKELDQVYNLIARNSPRRFVLPLLGNLNAPEGE 399
>UNIPROTKB|Q9HAY6 [details] [associations]
symbol:BCMO1 "Beta,beta-carotene 15,15'-monooxygenase"
species:9606 "Homo sapiens" [GO:0004497 "monooxygenase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0042572 "retinol metabolic process" evidence=IEA] [GO:0001523
"retinoid metabolic process" evidence=IDA;TAS] [GO:0003834
"beta-carotene 15,15'-monooxygenase activity" evidence=IDA;TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0008202 "steroid metabolic
process" evidence=TAS] [GO:0044281 "small molecule metabolic
process" evidence=TAS] [GO:0035238 "vitamin A biosynthetic process"
evidence=NAS] [GO:0042574 "retinal metabolic process" evidence=NAS]
Reactome:REACT_111217 UniPathway:UPA00912 GO:GO:0005829
GO:GO:0008202 GO:GO:0046872 GO:GO:0004497 EMBL:CH471114
GO:GO:0042572 GO:GO:0042574 CTD:53630 eggNOG:COG3670
HOGENOM:HOG000232156 HOVERGEN:HBG050679 KO:K00515 OMA:ITENYIV
OrthoDB:EOG4G7BZ5 GO:GO:0003834 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 EMBL:AF294900 EMBL:AK001592
EMBL:BC126210 EMBL:BC126212 IPI:IPI00307216 RefSeq:NP_059125.2
UniGene:Hs.212172 ProteinModelPortal:Q9HAY6 SMR:Q9HAY6
IntAct:Q9HAY6 STRING:Q9HAY6 PhosphoSite:Q9HAY6 DMDM:41688803
PRIDE:Q9HAY6 DNASU:53630 Ensembl:ENST00000258168 GeneID:53630
KEGG:hsa:53630 UCSC:uc002fgn.1 GeneCards:GC16P081272
HGNC:HGNC:13815 HPA:HPA043811 MIM:115300 MIM:605748
neXtProt:NX_Q9HAY6 Orphanet:199285 PharmGKB:PA37812
InParanoid:Q9HAY6 PhylomeDB:Q9HAY6 BioCyc:MetaCyc:HS06050-MONOMER
ChiTaRS:BCMO1 GenomeRNAi:53630 NextBio:56108 ArrayExpress:Q9HAY6
Bgee:Q9HAY6 CleanEx:HS_BCMO1 Genevestigator:Q9HAY6
GermOnline:ENSG00000135697 GO:GO:0035238 Uniprot:Q9HAY6
Length = 547
Score = 359 (131.4 bits), Expect = 2.0e-57, Sum P(3) = 2.0e-57
Identities = 74/195 (37%), Positives = 112/195 (57%)
Query: 1 QDNSEVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGL 60
++ E +PV+ V G IP+W+ G L+RNGPG VGE ++H FD LLH F I G
Sbjct: 7 RNRKEQLEPVRAKVTGKIPAWLQGTLLRNGPGMHTVGESRYNHWFDGLALLHSFTIRDGE 66
Query: 61 VTYQCKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK---PG-SDNTLV 116
V Y+ K+++S++Y N A RIVV+ FGT PDPC +IF + + P +DN L+
Sbjct: 67 VYYRSKYLRSDTYNTNIEANRIVVSEFGTMAYPDPCKNIFSKAFSYLSHTIPDFTDNCLI 126
Query: 117 SVYPIQDQVYALGDSNYMHRIDPATLDTLGKIDLAGDVTILHQTSHPLTTSDGETFNLGV 176
++ + YA ++NY+ +I+P TL+TL K+D V + TSHP G N+G
Sbjct: 127 NIMKCGEDFYATSETNYIRKINPQTLETLEKVDYRKYVAVNLATSHPHYDEAGNVLNMGT 186
Query: 177 TLRPTGP-RYCILQL 190
++ G +Y I ++
Sbjct: 187 SIVEKGKTKYVIFKI 201
Score = 182 (69.1 bits), Expect = 2.0e-57, Sum P(3) = 2.0e-57
Identities = 40/119 (33%), Positives = 65/119 (54%)
Query: 322 GCETPRMNGQHQGRSYTYFYAISADIDRDNPGTLIKVNVQNNTCKSWSQKDVYPSEPVFV 381
G E PR+N H G+ Y Y +A P +IK ++ + W + D +P+EP+FV
Sbjct: 403 GLELPRVNYAHNGKQYRYVFATGVQWS-PIPTKIIKYDILTKSSLKWREDDCWPAEPLFV 461
Query: 382 ATPNARKEDEGVLLSVLLWSHHPTRVS-LLVLNARTMQELGRVNFTTPTPVPKCLHGWY 439
P A+ ED+GV+LS ++ S P ++ LL+L+A++ EL R + + LHG +
Sbjct: 462 PAPGAKDEDDGVILSAIV-STDPQKLPFLLILDAKSFTELARASVDVDMHMD--LHGLF 517
Score = 86 (35.3 bits), Expect = 2.0e-57, Sum P(3) = 2.0e-57
Identities = 27/95 (28%), Positives = 43/95 (45%)
Query: 220 TIFHVLD-KTNGSVVHRFQADSFFYLHIINAYEDTNDG-IVVDICCYRNPAMLDCMYREA 277
T H++D +T V +F D+ H +NAYE+ DG IV D+ Y + ++ Y
Sbjct: 282 TYIHIIDQRTRQPVQTKFYTDAMVVFHHVNAYEE--DGCIVFDVIAYEDNSLYQLFYLAN 339
Query: 278 L-KNIHSTPRYAQMFRARPLRFRLDLASPRTAPTG 311
L ++ R + R RF + L + A G
Sbjct: 340 LNQDFKENSRLTSVPTLR--RFAVPLHVDKNAEVG 372
>UNIPROTKB|Q9I993 [details] [associations]
symbol:BCMO1 "Beta,beta-carotene 15,15'-monooxygenase"
species:9031 "Gallus gallus" [GO:0004497 "monooxygenase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0042572 "retinol metabolic process" evidence=IEA] [GO:0003834
"beta-carotene 15,15'-monooxygenase activity" evidence=IDA]
[GO:0001523 "retinoid metabolic process" evidence=IDA]
UniPathway:UPA00912 GO:GO:0046872 GO:GO:0004497 GO:GO:0042572
GO:GO:0001523 EMBL:AJ271386 IPI:IPI00595044 RefSeq:NP_989966.1
UniGene:Gga.41 STRING:Q9I993 Ensembl:ENSGALT00000008685
GeneID:395346 KEGG:gga:395346 CTD:53630 eggNOG:COG3670
GeneTree:ENSGT00500000044783 HOGENOM:HOG000232156
HOVERGEN:HBG050679 InParanoid:Q9I993 KO:K00515 OMA:ITENYIV
OrthoDB:EOG4G7BZ5 BioCyc:MetaCyc:MONOMER-17624 NextBio:20815431
GO:GO:0003834 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
Uniprot:Q9I993
Length = 526
Score = 364 (133.2 bits), Expect = 2.9e-56, Sum P(2) = 2.9e-56
Identities = 71/195 (36%), Positives = 116/195 (59%)
Query: 1 QDNSEVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGL 60
++ E +P++ V+G +P+W+ GVL+RNGPG +G+ ++H FD LLH F +G
Sbjct: 7 RNKEEHPEPIKAEVQGQLPTWLQGVLLRNGPGMHTIGDTKYNHWFDGLALLHSFTFKNGE 66
Query: 61 VTYQCKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK---PG-SDNTLV 116
V Y+ K+++S++Y N A RIVV+ FGT PDPC +IF + + P +DN L+
Sbjct: 67 VYYRSKYLRSDTYNCNIEANRIVVSEFGTMAYPDPCKNIFAKAFSYLSHTIPEFTDNCLI 126
Query: 117 SVYPIQDQVYALGDSNYMHRIDPATLDTLGKIDLAGDVTILHQTSHPLTTSDGETFNLGV 176
++ D YA ++N++ +IDP TL+TL K+D + V + TSHP S G N+G
Sbjct: 127 NIMKTGDDYYATSETNFIRKIDPQTLETLDKVDYSKYVAVNLATSHPHYDSAGNILNMGT 186
Query: 177 TLRPTG-PRYCILQL 190
++ G +Y + ++
Sbjct: 187 SIVDKGRTKYVLFKI 201
Score = 233 (87.1 bits), Expect = 2.9e-56, Sum P(2) = 2.9e-56
Identities = 72/234 (30%), Positives = 109/234 (46%)
Query: 227 KTNGSVVHRFQADSFFYLHIINAYEDTN----------DGIVVDICCYRNPAMLDCMYRE 276
KT V +F D+ H INAYE+ D + D+ Y D
Sbjct: 289 KTKKEVSTKFYTDALVLYHHINAYEEDGHVVFDIVAYRDNSLYDMF-YLKKLDKDFEVNN 347
Query: 277 ALKNIHSTPRYA---QMFRARPLRFRL-DLASPRTA---PTGKV--RPSVICDVGCETPR 327
L +I + R+ Q + + L L + TA G + +P ++C+ G E PR
Sbjct: 348 KLTSIPTCKRFVVPLQYDKDAEVGSNLVKLPTSATAVKEKDGSIYCQPEILCE-GIELPR 406
Query: 328 MNGQHQGRSYTYFYAISADIDRDNPGTLIKVNVQNNTCKSWSQKDVYPSEPVFVATPNAR 387
+N + G+ Y Y YA P + K+NVQ W + +PSEP+FV +P+AR
Sbjct: 407 VNYDYNGKKYKYVYATEVQWS-PVPTKIAKLNVQTKEVLHWGEDHCWPSEPIFVPSPDAR 465
Query: 388 KEDEGVLLSVLLWSHHPTRVSLLVLNARTMQELGRVNFTTPTPVPKCLHGWYFP 441
+EDEGV+L+ ++ S LL+L+A+T +ELGR T + LHG + P
Sbjct: 466 EEDEGVVLTCVVVSEPNKAPFLLILDAKTFKELGRA--TVNVEMHLDLHGMFIP 517
>ZFIN|ZDB-GENE-040426-1191 [details] [associations]
symbol:bcmo1b "beta-carotene 15,15'-monooxygenase
1b" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND]
ZFIN:ZDB-GENE-040426-1191 eggNOG:COG3670 HOGENOM:HOG000232156
HOVERGEN:HBG050679 KO:K00515 OrthoDB:EOG4G7BZ5 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 EMBL:BC056789 IPI:IPI00503910
RefSeq:NP_956902.1 UniGene:Dr.84019 ProteinModelPortal:Q6PGY1
STRING:Q6PGY1 GeneID:393580 KEGG:dre:393580 CTD:393580
InParanoid:Q6PGY1 NextBio:20814600 Uniprot:Q6PGY1
Length = 525
Score = 392 (143.0 bits), Expect = 6.9e-55, Sum P(2) = 6.9e-55
Identities = 93/263 (35%), Positives = 139/263 (52%)
Query: 5 EVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQ 64
E +P++ V G IP W+ G L+RNGPG ++VG S+ H FD L+H F G V Y+
Sbjct: 11 ETPEPLKADVSGSIPPWLQGTLLRNGPGLFSVGNTSYKHWFDGMALIHSFTFKDGEVFYR 70
Query: 65 CKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK---PG-SDNTLVSVYP 120
K++KSE+Y KN AA RIVV+ FGT PDPC +IF R + P +DN L+++
Sbjct: 71 SKYLKSETYKKNIAADRIVVSEFGTMVYPDPCKNIFSRAFSYMMNAIPDFTDNNLINIIK 130
Query: 121 IQDQVYALGDSNYMHRIDPATLDTLGKIDLAGDVTILHQTSHPLTTSDGETFNLGVTLRP 180
+ YA + NY+++IDP TL+TLG+ + + I T+HP +G T+N+G +
Sbjct: 131 YGEDYYASSEVNYINQIDPLTLETLGRTNYRNHIAINLATAHPHYDEEGNTYNMGTAIMN 190
Query: 181 TG-PRYCILQL----NDAFSY-PDLSHXXXXXXSLRFRDDIDMTSTIFHVLDKTNGSVVH 234
G P+Y I ++ +D + P LS S+ R + + FH T ++
Sbjct: 191 LGRPKYVIFKVPANTSDKENKKPALSEVEQVC-SIPIRPSL--YPSYFHSFGMTENYIIF 247
Query: 235 RFQADSFFYLHIINAY-EDTNDG 256
QA + + AY D N G
Sbjct: 248 VEQAFKLDIVKLATAYFRDINWG 270
Score = 192 (72.6 bits), Expect = 6.9e-55, Sum P(2) = 6.9e-55
Identities = 47/131 (35%), Positives = 75/131 (57%)
Query: 315 PSVICDVGCETPRMNGQHQGRSYTYFYAISADIDRDNPGTLIKVNVQNNTCKSWSQKDVY 374
P +I G E P +N + + YFY + P + KV+V T K W++++ Y
Sbjct: 399 PDIIFK-GLELPAINYKFNSKKNRYFYGTRVEWS-PYPNKVAKVDVVTRTHKIWTEEECY 456
Query: 375 PSEPVFVATPNARKEDEGVLLSVLLWSHHPTRVS-LLVLNARTMQELGRVNFTTPTPVPK 433
PSEPVF+A+P+A ED+GV+LS ++ S +P R L+VL+A++ +E+ R T +
Sbjct: 457 PSEPVFIASPDAVDEDDGVILSSVV-SFNPQRPPFLVVLDAKSFKEIARA--TIDASIHM 513
Query: 434 CLHGWYFPHER 444
LHG F H++
Sbjct: 514 DLHG-LFIHDK 523
Score = 109 (43.4 bits), Expect = 5.7e-19, Sum P(2) = 5.7e-19
Identities = 34/108 (31%), Positives = 57/108 (52%)
Query: 209 LRF-RDDIDMTSTIFHVLDKTNGSVVH-RFQADSFFYLHIINAYEDTNDG-IVVDICCYR 265
L+F +DDI+ +FH+++K G V ++ D F H INAYED DG +V D+ Y+
Sbjct: 273 LKFDQDDIN----VFHLVNKKTGKAVSVKYYTDPFVTFHHINAYED--DGHVVFDLITYK 326
Query: 266 NPAMLDCMYREALKNIHSTPRYAQMFR--ARPL--RFRLDLASPRTAP 309
+ + D Y + +K R+ + + A+P+ RF L + + P
Sbjct: 327 DSKLYDMFYIQNMKQ--DVKRFIETNKDFAQPVCQRFVLPVNVDKETP 372
Score = 39 (18.8 bits), Expect = 8.3e-39, Sum P(2) = 8.3e-39
Identities = 17/86 (19%), Positives = 42/86 (48%)
Query: 341 YAISADIDRDNPGTLIKVNVQNNTCKSWSQKD--VYPSEPVF---VATP--NAR---KED 390
+ + ++D++ P + V +Q+ T + ++D VY + + + P N + K++
Sbjct: 361 FVLPVNVDKETPQDINLVKLQDTTATAVLKEDGSVYCTPDIIFKGLELPAINYKFNSKKN 420
Query: 391 EGVLLSVLLWSHHPTRVSLLVLNART 416
+ + WS +P +V+ + + RT
Sbjct: 421 RYFYGTRVEWSPYPNKVAKVDVVTRT 446
>UNIPROTKB|F1N3B7 [details] [associations]
symbol:BCMO1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003834 "beta-carotene 15,15'-monooxygenase activity"
evidence=IEA] [GO:0001523 "retinoid metabolic process"
evidence=IEA] GO:GO:0001523 GeneTree:ENSGT00500000044783
OMA:ITENYIV GO:GO:0003834 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 EMBL:DAAA02046109 EMBL:DAAA02046110 IPI:IPI00702818
Ensembl:ENSBTAT00000048748 Uniprot:F1N3B7
Length = 494
Score = 359 (131.4 bits), Expect = 8.7e-54, Sum P(3) = 8.7e-54
Identities = 74/195 (37%), Positives = 114/195 (58%)
Query: 1 QDNSEVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGL 60
++ E +PV+ V G IP+W+ G+L+RNGPG VGE ++H FD LLH F I G
Sbjct: 7 RNKKEQLEPVRARVTGKIPAWLQGILLRNGPGMHTVGETRYNHWFDGLALLHSFTIRDGE 66
Query: 61 VTYQCKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK---PG-SDNTLV 116
V Y+ K+++S++Y N A RIVV+ FGT PDPC +IF + + P +DN L+
Sbjct: 67 VYYRSKYLRSDTYTANIEANRIVVSEFGTMAYPDPCKNIFSKAFSYLSHTIPDFTDNCLI 126
Query: 117 SVYPIQDQVYALGDSNYMHRIDPATLDTLGKIDLAGDVTILHQTSHPLTTSDGETFNLGV 176
++ + YA +++Y+ RI+P TL+TL K+D V + TSHP + G N+G
Sbjct: 127 NIMRCGEDFYATTETSYIRRINPQTLETLEKVDFRKYVAVNLATSHPHYDAAGNVLNVGT 186
Query: 177 TLRPTGP-RYCILQL 190
++ G +Y I ++
Sbjct: 187 SIVDKGKTKYVIFKI 201
Score = 149 (57.5 bits), Expect = 8.7e-54, Sum P(3) = 8.7e-54
Identities = 32/101 (31%), Positives = 54/101 (53%)
Query: 314 RPSVICDVGCETPRMNGQHQGRSYTYFYAISADIDRDNPGTLIKVNVQNNTCKSWSQKDV 373
+P ++C+ G E P +N H G+ Y Y +A P V + +W ++
Sbjct: 396 QPELLCE-GLELPHINYAHNGQPYRYIFAAGVQWS-PIPKLFYSSIVAQWSSLTWREEHC 453
Query: 374 YPSEPVFVATPNARKEDEGVLLSVLLWSHHPTRVSLLVLNA 414
+P+EP+FV TP A+ ED+G++LS ++ + LLVL+A
Sbjct: 454 WPAEPLFVPTPGAKDEDDGIILSAIVSTDPQKSPFLLVLDA 494
Score = 77 (32.2 bits), Expect = 8.7e-54, Sum P(3) = 8.7e-54
Identities = 25/96 (26%), Positives = 43/96 (44%)
Query: 220 TIFHVLDK-TNGSVVHRFQADSFFYLHIINAYEDTNDG-IVVDICCYRNPAMLDCMYREA 277
T H++D+ T V ++ D H +NAYE+ DG ++ D+ Y + ++ Y
Sbjct: 282 THIHIIDRRTRKPVPTKYHTDPMVVFHHVNAYEE--DGCLLFDVITYEDGSLYQLFY--- 336
Query: 278 LKNIHSTPRYAQMFRARPL--RFRLDLASPRTAPTG 311
L N++ + + P RF L L + A G
Sbjct: 337 LANLNEDFKENSRLTSMPTLKRFVLPLHVDKNAEVG 372
>ZFIN|ZDB-GENE-010508-1 [details] [associations]
symbol:bcmo1a "beta-carotene 15,15'-monooxygenase 1a"
species:7955 "Danio rerio" [GO:0008198 "ferrous iron binding"
evidence=NAS] [GO:0003834 "beta-carotene 15,15'-monooxygenase
activity" evidence=IDA] [GO:0030902 "hindbrain development"
evidence=IMP] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0004497 "monooxygenase
activity" evidence=IEA] [GO:0001754 "eye photoreceptor cell
differentiation" evidence=IMP] ZFIN:ZDB-GENE-010508-1 GO:GO:0008198
GO:GO:0030902 HOVERGEN:HBG050679 GO:GO:0003834 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 BRENDA:1.14.99.36 GO:GO:0001754
EMBL:AJ290390 IPI:IPI00483690 UniGene:Dr.12383 STRING:Q90WH4
ArrayExpress:Q90WH4 Uniprot:Q90WH4
Length = 516
Score = 343 (125.8 bits), Expect = 1.4e-53, Sum P(2) = 1.4e-53
Identities = 70/203 (34%), Positives = 116/203 (57%)
Query: 1 QDNSEVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGL 60
++ E +P++ V+G IP W+ G LIRNGPG ++VGE +++H FD LLH F I+ G
Sbjct: 7 KNKEEHPEPIKTEVKGSIPEWVQGTLIRNGPGMFSVGETTYNHWFDGMALLHSFAINKGE 66
Query: 61 VTYQCKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK---PG-SDNTLV 116
VTY+ ++++ ++Y N A RIVV+ GT PDPC +IF ++ T P +DN
Sbjct: 67 VTYRSRYLRGDTYNSNMQANRIVVSEMGTMAYPDPCKNIFSKVITFLSHTIPDFTDNCGN 126
Query: 117 SVYPIQDQVYALGDSNYMHRIDPATLDTLGKIDLAGDVTILHQTSHPLTTSDGETFNLGV 176
++ + +A ++NY+ +IDP TL+T KID + + SH +G ++++G
Sbjct: 127 NIIKYGNDFHATSETNYIRKIDPVTLETQEKIDYLKYLPVSIVASHTHYDKEGNSYSMGT 186
Query: 177 TLRPTGP-RYCILQLNDAFSYPD 198
+ G +Y + ++ S PD
Sbjct: 187 CIAEKGKTKYMLFKVPGG-SRPD 208
Score = 232 (86.7 bits), Expect = 1.4e-53, Sum P(2) = 1.4e-53
Identities = 69/245 (28%), Positives = 121/245 (49%)
Query: 219 STIFHVLDK-TNGSVVHRFQADSFFYLHIINAYEDTNDG-IVVDICCYRNPAMLDCMYRE 276
ST+ H++D+ T V +F D+ H +NA+ED DG +V D+ Y + + + Y
Sbjct: 278 STLIHLIDRNTKKEVATKFYTDAMTVYHQVNAFED--DGHVVFDVIAYDDNNLYEFFYLN 335
Query: 277 ALK------NIHSTPRYAQ-MFRARP--------LRFRLDLASPRTAPTGKV--RPSVIC 319
LK N++ P++ + +F ++ + AS GK+ + V+C
Sbjct: 336 KLKETMGATNLYCKPKFTRFVFPLSDQGETGEDLVKLKYTTASAVKEKDGKIMCQGEVLC 395
Query: 320 DVGCETPRMNGQHQGRSYTYFYAISADIDRDNP-GT-LIKVNVQNNTCKSWSQKDVYPSE 377
+ G E PR+N G+ Y Y Y D ++P T ++K + W D + SE
Sbjct: 396 E-GVELPRINYNFNGKKYRYSYMCCVD---ESPVATRIVKFDADTKQQIEWKGDDGFASE 451
Query: 378 PVFVATPNARKEDEGVLLSVLLWSHHPTRVS-LLVLNARTMQELGRVNFTTPTPVPKCLH 436
PVF+ P A ED+GV+L+V++ ++ P + LLVL+A++ +E+ R + +H
Sbjct: 452 PVFIPRPGAVDEDDGVVLTVII-NNKPLQGGFLLVLDAKSFKEIARA--CLDVEIHMDMH 508
Query: 437 GWYFP 441
G++ P
Sbjct: 509 GYFIP 513
>WB|WBGene00018755 [details] [associations]
symbol:bcmo-2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
GO:GO:0040010 eggNOG:COG3670 GeneTree:ENSGT00500000044783
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055 EMBL:FO080905
RefSeq:NP_494694.2 ProteinModelPortal:Q9TXT9 PaxDb:Q9TXT9
EnsemblMetazoa:F53C3.12 GeneID:173733 KEGG:cel:CELE_F53C3.12
CTD:173733 WormBase:F53C3.12 HOGENOM:HOG000153586 InParanoid:Q9TXT9
OMA:MEAQRIV NextBio:880851 Uniprot:Q9TXT9
Length = 530
Score = 326 (119.8 bits), Expect = 4.1e-47, Sum P(3) = 4.1e-47
Identities = 66/182 (36%), Positives = 102/182 (56%)
Query: 2 DNSEVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLV 61
DN V +P + G +PS++ G ++RNGPG + +G+ + H FD G + R+ G +
Sbjct: 14 DN--VIEPKLCSTSGSVPSYLKGTMLRNGPGMFEIGDTKYQHWFDGMGFIQRYHFEDGKM 71
Query: 62 TYQCKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFKPGS---DNTLVSV 118
Y ++++SE+Y KN A+RIV FGT PDPC SIF R + F DN V+
Sbjct: 72 YYSARYLESENYKKNMEAQRIVTGSFGTASFPDPCKSIFSRFFSSFVQSEGIHDNANVAF 131
Query: 119 YPIQDQVYALGDSNYMHRIDPATLDTLGKIDLAGDVTILHQTSHPLTTSDGETFNLGVTL 178
P+ D +YA ++ MHR+D +LDTL +D + V + T+H L +G+ +N+G
Sbjct: 132 APVGDGLYACTETPNMHRVDLDSLDTLEPVDFSKYVALHTCTAHQLFDENGDVYNIGSRF 191
Query: 179 RP 180
P
Sbjct: 192 GP 193
Score = 145 (56.1 bits), Expect = 4.1e-47, Sum P(3) = 4.1e-47
Identities = 39/138 (28%), Positives = 68/138 (49%)
Query: 311 GKVR--PSVICDVGCETPRMNGQHQG-RSYTYFYAIS---ADIDRDNPGTLIKVNVQNNT 364
GK+R +CD+ E PR + + + Y Y Y S A PG ++K +++N
Sbjct: 392 GKIRLKEKRVCDISMEFPRYHWEKINMKPYNYVYGSSVLGAQKSETLPG-IVKADLENGD 450
Query: 365 CKSWSQKDVYP--SEPVFVATPNARKEDEGVLLSVLLWSHHPTRVSLLVLNARTMQELGR 422
K W +++ EP+FV P +ED+G+L+ ++ R +L+L A+ + E+ R
Sbjct: 451 HKVWRRENDKQICGEPIFVPNPEGVREDDGILIVPVMTISDGQRPFVLILEAKNLTEIAR 510
Query: 423 VNFTTPTP-VPKCLHGWY 439
+T P +P H +Y
Sbjct: 511 --YTIPEARIPLGFHAFY 526
Score = 62 (26.9 bits), Expect = 4.1e-47, Sum P(3) = 4.1e-47
Identities = 20/65 (30%), Positives = 27/65 (41%)
Query: 216 DMTSTIFHVLDKTNGSVVHRFQADSFFYLHIINAYEDTNDG-IVVDICCYRNPAMLDCMY 274
D IF + KT V + + FF H N +E DG +VVD C D +
Sbjct: 279 DKDVKIFILNKKTGEQVPLKLKMAPFFTFHHANTFE--RDGCLVVDYCRIEQAGNFDALL 336
Query: 275 REALK 279
E +K
Sbjct: 337 IENMK 341
>RGD|1309022 [details] [associations]
symbol:Bco2 "beta-carotene oxygenase 2" species:10116 "Rattus
norvegicus" [GO:0005739 "mitochondrion" evidence=ISO] [GO:0016116
"carotenoid metabolic process" evidence=ISO] [GO:0016119 "carotene
metabolic process" evidence=ISO] [GO:0016121 "carotene catabolic
process" evidence=ISO] [GO:0016702 "oxidoreductase activity, acting
on single donors with incorporation of molecular oxygen,
incorporation of two atoms of oxygen" evidence=ISO] [GO:0051881
"regulation of mitochondrial membrane potential" evidence=ISO]
[GO:0055114 "oxidation-reduction process" evidence=ISO] [GO:2000377
"regulation of reactive oxygen species metabolic process"
evidence=ISO] InterPro:IPR012606 Pfam:PF08069 RGD:1309022
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735 HOVERGEN:HBG050679
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055 IPI:IPI00382241
EMBL:AY325176 UniGene:Rn.162999 ProteinModelPortal:Q7TP70
PRIDE:Q7TP70 UCSC:RGD:1309022 Genevestigator:Q7TP70 Uniprot:Q7TP70
Length = 481
Score = 306 (112.8 bits), Expect = 3.2e-46, Sum P(3) = 3.2e-46
Identities = 58/140 (41%), Positives = 89/140 (63%)
Query: 10 VQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQCKFIK 69
V V G IP W++G L+R GPG + G++ ++H FD LLH+FK+ G VTY+ KF++
Sbjct: 100 VSARVRGHIPEWLNGYLLRVGPGKFEFGKDRYNHWFDGMALLHQFKMEKGTVTYKSKFLQ 159
Query: 70 SESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFKPGS--DNTLVSVYPIQDQVYA 127
S++Y N A RIV++ FGT +PDPC SIF+R + F+P + DNT V+ + Y
Sbjct: 160 SDTYKANSAGDRIVISEFGTLALPDPCKSIFERFMSRFEPPTMTDNTSVNFVQYKGDYYM 219
Query: 128 LGDSNYMHRIDPATLDTLGK 147
++N+M+++D TL+ K
Sbjct: 220 STETNFMNKVDIETLERTEK 239
Score = 163 (62.4 bits), Expect = 3.2e-46, Sum P(3) = 3.2e-46
Identities = 38/92 (41%), Positives = 55/92 (59%)
Query: 322 GCETPRMN-GQHQGRSYTYFYAISADIDRDNPG-TLIKVNVQNNTCKSWSQKDVYPSEPV 379
G E P++N G+ G+ Y++FY R G +LIKV+V N T + W ++ YPSEPV
Sbjct: 359 GIEFPQINYGRFSGKKYSFFYGCGF---RHLVGDSLIKVDVVNKTLRVWREEGCYPSEPV 415
Query: 380 FVATPNARKEDEGVLLSVLLWSHHPTRVSLLV 411
FV P A +ED G +LSV++ P + S +V
Sbjct: 416 FVPVPGADEEDSGAILSVVIT---PNQTSAIV 444
Score = 92 (37.4 bits), Expect = 3.2e-46, Sum P(3) = 3.2e-46
Identities = 32/105 (30%), Positives = 51/105 (48%)
Query: 217 MTSTIFHVLDKTNGSVVHRFQADSFFYLHIINAYEDTNDGIVVDICCYRNPAMLDCMYRE 276
M L++T + + + F H INA+ED IV+D+CC + LD +Y+
Sbjct: 226 MNKVDIETLERTEKPLPGVYYSKPFLTYHQINAFEDQGC-IVIDLCCEDDGRSLD-IYQ- 282
Query: 277 ALKNIHST-PRYAQMFRAR----PLRFRLDLASPRTAPTGK-VRP 315
L+N+ Q+++A+ P RF L L AP G+ +RP
Sbjct: 283 -LQNLRKAGEELDQVYKAKAKSFPRRFVLPLDISVGAPEGENLRP 326
>RGD|1597300 [details] [associations]
symbol:Tex12 "testis expressed 12" species:10116 "Rattus
norvegicus" [GO:0000795 "synaptonemal complex" evidence=ISO]
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] InterPro:IPR012606 Pfam:PF08069 RGD:1597300
GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
GeneTree:ENSGT00500000044783 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 IPI:IPI00382241 Ensembl:ENSRNOT00000059191
UCSC:RGD:1597300 ArrayExpress:F1LMB4 Uniprot:F1LMB4
Length = 481
Score = 306 (112.8 bits), Expect = 3.2e-46, Sum P(3) = 3.2e-46
Identities = 58/140 (41%), Positives = 89/140 (63%)
Query: 10 VQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQCKFIK 69
V V G IP W++G L+R GPG + G++ ++H FD LLH+FK+ G VTY+ KF++
Sbjct: 100 VSARVRGHIPEWLNGYLLRVGPGKFEFGKDRYNHWFDGMALLHQFKMEKGTVTYKSKFLQ 159
Query: 70 SESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFKPGS--DNTLVSVYPIQDQVYA 127
S++Y N A RIV++ FGT +PDPC SIF+R + F+P + DNT V+ + Y
Sbjct: 160 SDTYKANSAGDRIVISEFGTLALPDPCKSIFERFMSRFEPPTMTDNTSVNFVQYKGDYYM 219
Query: 128 LGDSNYMHRIDPATLDTLGK 147
++N+M+++D TL+ K
Sbjct: 220 STETNFMNKVDIETLERTEK 239
Score = 163 (62.4 bits), Expect = 3.2e-46, Sum P(3) = 3.2e-46
Identities = 38/92 (41%), Positives = 55/92 (59%)
Query: 322 GCETPRMN-GQHQGRSYTYFYAISADIDRDNPG-TLIKVNVQNNTCKSWSQKDVYPSEPV 379
G E P++N G+ G+ Y++FY R G +LIKV+V N T + W ++ YPSEPV
Sbjct: 359 GIEFPQINYGRFSGKKYSFFYGCGF---RHLVGDSLIKVDVVNKTLRVWREEGCYPSEPV 415
Query: 380 FVATPNARKEDEGVLLSVLLWSHHPTRVSLLV 411
FV P A +ED G +LSV++ P + S +V
Sbjct: 416 FVPVPGADEEDSGAILSVVIT---PNQTSAIV 444
Score = 92 (37.4 bits), Expect = 3.2e-46, Sum P(3) = 3.2e-46
Identities = 32/105 (30%), Positives = 51/105 (48%)
Query: 217 MTSTIFHVLDKTNGSVVHRFQADSFFYLHIINAYEDTNDGIVVDICCYRNPAMLDCMYRE 276
M L++T + + + F H INA+ED IV+D+CC + LD +Y+
Sbjct: 226 MNKVDIETLERTEKPLPGVYYSKPFLTYHQINAFEDQGC-IVIDLCCEDDGRSLD-IYQ- 282
Query: 277 ALKNIHST-PRYAQMFRAR----PLRFRLDLASPRTAPTGK-VRP 315
L+N+ Q+++A+ P RF L L AP G+ +RP
Sbjct: 283 -LQNLRKAGEELDQVYKAKAKSFPRRFVLPLDISVGAPEGENLRP 326
>UNIPROTKB|E9PJJ1 [details] [associations]
symbol:BCO2 "Beta,beta-carotene 9',10'-oxygenase"
species:9606 "Homo sapiens" [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0016116 "carotenoid metabolic process"
evidence=IEA] [GO:0016121 "carotene catabolic process"
evidence=IEA] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=IEA] [GO:0051881 "regulation of
mitochondrial membrane potential" evidence=IEA] [GO:2000377
"regulation of reactive oxygen species metabolic process"
evidence=IEA] InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
EMBL:AP002884 HGNC:HGNC:18503 ChiTaRS:BCO2 IPI:IPI00985076
ProteinModelPortal:E9PJJ1 SMR:E9PJJ1 Ensembl:ENST00000532593
ArrayExpress:E9PJJ1 Bgee:E9PJJ1 Uniprot:E9PJJ1
Length = 474
Score = 257 (95.5 bits), Expect = 1.4e-43, Sum P(3) = 1.4e-43
Identities = 51/147 (34%), Positives = 90/147 (61%)
Query: 50 LLHRFKISSGLVTYQCKFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK- 108
LLH+F+++ G VTY+ KF++S++Y N A RIV++ FGT +PDPC ++F+R + F+
Sbjct: 3 LLHQFRMAKGTVTYRSKFLQSDTYKANSAKNRIVISEFGTLALPDPCKNVFERFMSRFEL 62
Query: 109 PG-----SDNTLVSVYPIQDQVYALGDSNYMHRIDPATLDTLGKIDLAGDVTILHQTSHP 163
PG +DNT V+ + Y ++N+M+++D TL+ K+D + + + T+HP
Sbjct: 63 PGKAAAMTDNTNVNYVRYKGDYYLCTETNFMNKVDIETLEKTEKVDWSKFIAVNGATAHP 122
Query: 164 LTTSDGETFNLGVTLRPTGPRYCILQL 190
DG +N+G + P G Y ++++
Sbjct: 123 HYDLDGTAYNMGNSFGPYGFSYKVIRV 149
Score = 196 (74.1 bits), Expect = 1.4e-43, Sum P(3) = 1.4e-43
Identities = 47/122 (38%), Positives = 66/122 (54%)
Query: 322 GCETPRMN-GQHQGRSYTYFYAISADIDRDNPG-TLIKVNVQNNTCKSWSQKDVYPSEPV 379
G E P++ + G+ Y +FY R G +LIKV+V N T K W + YPSEPV
Sbjct: 357 GIEFPQIYYDRFSGKKYHFFYGCGF---RHLVGDSLIKVDVVNKTLKVWREDGFYPSEPV 413
Query: 380 FVATPNARKEDEGVLLSVLLWSHHPTRVSLLVLNARTMQELGRVNFTTPTPVPKCLHGWY 439
FV P +ED GV+LSV++ + +LVL+A+ +ELGR P +P HG +
Sbjct: 414 FVPAPGTNEEDGGVILSVVITPNQNESNFILVLDAKNFEELGRAE--VPVQMPYGFHGTF 471
Query: 440 FP 441
P
Sbjct: 472 IP 473
Score = 106 (42.4 bits), Expect = 1.4e-43, Sum P(3) = 1.4e-43
Identities = 33/102 (32%), Positives = 52/102 (50%)
Query: 219 STIFHVLDKTNGSVVH-RFQADSFFYLHIINAYEDTNDGIVVDICCYRNPAMLDCMYR-- 275
+T FHV++K G ++ R+ + F H INA+ED +++D+CC N L+ +Y+
Sbjct: 225 NTRFHVVEKRTGQLLPGRYYSKPFVTFHQINAFEDQGC-VIIDLCCQDNGRTLE-VYQLQ 282
Query: 276 ------EALKNIHSTPRYAQMFRARPLRFRLDLASPRTAPTG 311
E L +H++ A+ F P RF L L AP G
Sbjct: 283 NLRKAGEGLDQVHNSA--AKSF---PRRFVLPLNVSLNAPEG 319
>WB|WBGene00012914 [details] [associations]
symbol:bcmo-1 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
GO:GO:0040010 eggNOG:COG3670 GeneTree:ENSGT00500000044783
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055 EMBL:AL110485
OMA:TSMEFPR HOGENOM:HOG000153586 RefSeq:NP_496729.2
UniGene:Cel.14051 ProteinModelPortal:Q9U2E4 SMR:Q9U2E4
DIP:DIP-26226N IntAct:Q9U2E4 MINT:MINT-1067701 PaxDb:Q9U2E4
EnsemblMetazoa:Y46G5A.24 GeneID:189959 KEGG:cel:CELE_Y46G5A.24
UCSC:Y46G5A.24 CTD:189959 WormBase:Y46G5A.24 InParanoid:Q9U2E4
NextBio:944184 Uniprot:Q9U2E4
Length = 529
Score = 315 (115.9 bits), Expect = 3.3e-40, Sum P(3) = 3.3e-40
Identities = 64/178 (35%), Positives = 101/178 (56%)
Query: 6 VDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQC 65
V +P + G +PS++ G ++RNGPG + VGEE + H FD G + R+ G + Y
Sbjct: 16 VPEPKECKKVGSVPSYLTGTMLRNGPGMFTVGEEEYKHWFDGLGFMQRYHFEDGKMFYSA 75
Query: 66 KFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFKPGS---DNTLVSVYPIQ 122
++++SE+Y K A+RIV FGT PDPC +IF + + F S DN+ V+ P+
Sbjct: 76 RYLESEAYTKTVEAQRIVAGTFGTLSFPDPCKTIFSKYFSEFMNHSEKHDNSNVAFTPVG 135
Query: 123 DQVYALGDSNYMHRIDPATLDTLGKIDLAGDVTILHQTSHPLTTSDGETFNLGVTLRP 180
D +YA ++ +M+R+D TL TL D + V + T+H L +G+ +N+G P
Sbjct: 136 DSLYACTETPHMYRVDLDTLKTLEAADFSKFVAVHSCTAHQLYDENGDVYNIGSRFGP 193
Score = 126 (49.4 bits), Expect = 3.3e-40, Sum P(3) = 3.3e-40
Identities = 33/130 (25%), Positives = 66/130 (50%)
Query: 318 ICDVGCETPRMNGQHQG-RSYTYFYA--ISADIDRDNPGTLIKVNVQNNTCKSWSQKDVY 374
+C+ E PR + + + Y Y + + ID + G ++K +++ W++++ +
Sbjct: 401 VCETSMEFPRYHWEKINMKEYRYVFGSTVFGRIDGNLAG-VVKADLKFGNHLIWNRENPH 459
Query: 375 P--SEPVFVATPNARKEDEGVLLSVLLWSHHPTRVSLLVLNARTMQELGRVNFTTPTP-V 431
EP+FV P +ED+G+L+ ++ S +L+L+A+T++E R F P +
Sbjct: 460 QICGEPIFVPNPEGIEEDDGILIVPIMSSSEKQVPFVLILDAKTLEETAR--FEIPEARI 517
Query: 432 PKCLHGWYFP 441
P H +Y P
Sbjct: 518 PLGFHAFYKP 527
Score = 60 (26.2 bits), Expect = 3.3e-40, Sum P(3) = 3.3e-40
Identities = 20/72 (27%), Positives = 32/72 (44%)
Query: 209 LRFRDDIDMTSTIFHVLDKTNGSVVHRFQADSFFYLHIINAYEDTNDG-IVVDICCYRNP 267
L + D D++ IF + KT + + + FF H N +E DG +V+D C N
Sbjct: 274 LEWHGDKDVS--IFILNKKTGEQLPLTLKMNPFFTFHHANTFE--KDGCLVMDYCRIENA 329
Query: 268 AMLDCMYREALK 279
D + +K
Sbjct: 330 GKFDTLLISNMK 341
Score = 39 (18.8 bits), Expect = 1.7e-27, Sum P(2) = 1.7e-27
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 398 LLWSHHPTRVSLLVLNARTMQEL 420
L W H VS+ +LN +T ++L
Sbjct: 274 LEW-HGDKDVSIFILNKKTGEQL 295
>UNIPROTKB|F1P321 [details] [associations]
symbol:RPE65 "Retinoid isomerohydrolase" species:9031
"Gallus gallus" [GO:0004744 "retinal isomerase activity"
evidence=IEA] [GO:0007468 "regulation of rhodopsin gene expression"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0008286 "insulin receptor signaling pathway" evidence=IEA]
[GO:0042574 "retinal metabolic process" evidence=IEA] [GO:0060042
"retina morphogenesis in camera-type eye" evidence=IEA] [GO:0071257
"cellular response to electrical stimulus" evidence=IEA]
GeneTree:ENSGT00500000044783 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 IPI:IPI00584895 EMBL:AADN02012423
Ensembl:ENSGALT00000018373 Uniprot:F1P321
Length = 449
Score = 230 (86.0 bits), Expect = 1.4e-36, Sum P(3) = 1.4e-36
Identities = 42/109 (38%), Positives = 72/109 (66%)
Query: 69 KSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK--PGSDNTLVSVYPIQDQVY 126
++++Y++ +RIV+T FGT PDPC +IF R + FK +DN LV+VYP+ + Y
Sbjct: 1 RTDAYVRAMTEKRIVITEFGTYAYPDPCKNIFSRFFSYFKGVEVTDNALVNVYPVGEDYY 60
Query: 127 ALGDSNYMHRIDPATLDTLGKIDLAGDVTILHQTSHPLTTSDGETFNLG 175
A ++N++ +I+P TL+T+ ++DL V++ T+HP +DG +N+G
Sbjct: 61 ACTETNFITKINPDTLETIKQVDLCKYVSVNGATAHPHVENDGTVYNIG 109
Score = 190 (71.9 bits), Expect = 1.4e-36, Sum P(3) = 1.4e-36
Identities = 43/118 (36%), Positives = 67/118 (56%)
Query: 324 ETPRMN-GQHQGRSYTYFYAISADIDRDNPGTLIKVNVQNNTCKSWSQKDVYPSEPVFVA 382
E P++N ++ G+ YTY Y + ++ P L K+NV+ W + D YPSEP+FV+
Sbjct: 333 EFPQINYKKYGGKPYTYTYGLG--LNHFVPDRLCKLNVKTKETWVWQEPDSYPSEPIFVS 390
Query: 383 TPNARKEDEGVLLSVLLW-SHHPTRVSLLVLNARTMQELGRVNFTTPTPVPKCLHGWY 439
P+A +ED+GV+LS+++ P LL+LNA+ M E+ R PV HG +
Sbjct: 391 HPDALEEDDGVVLSIVISPGSGPKPAYLLILNAKDMSEVARAEVEVNIPVT--FHGLF 446
Score = 77 (32.2 bits), Expect = 1.4e-36, Sum P(3) = 1.4e-36
Identities = 25/94 (26%), Positives = 48/94 (51%)
Query: 223 HVLDKTNGSVVH-RFQADSFFYLHIINAYEDTNDGIVVDICCYRN-PAMLDCMYREALK- 279
HV +K G +++ +++ +F H IN +ED N ++VD+C ++ + + +Y L+
Sbjct: 206 HVAEKKKGRLLNIKYRTSAFNLFHHINTFED-NGFLIVDLCTWKGFEFVYNYLYLANLRA 264
Query: 280 NIHSTPRYAQMF-RARPLRFRLDLASPRTAPTGK 312
N + A+ + R+ L L + A TGK
Sbjct: 265 NWDEVKKQAEKAPQPEARRYVLPLRIDK-ADTGK 297
>UNIPROTKB|F1NE28 [details] [associations]
symbol:RPE65 "Retinoid isomerohydrolase" species:9031
"Gallus gallus" [GO:0004744 "retinal isomerase activity"
evidence=IEA] [GO:0007468 "regulation of rhodopsin gene expression"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0008286 "insulin receptor signaling pathway" evidence=IEA]
[GO:0042574 "retinal metabolic process" evidence=IEA] [GO:0060042
"retina morphogenesis in camera-type eye" evidence=IEA] [GO:0071257
"cellular response to electrical stimulus" evidence=IEA]
GeneTree:ENSGT00500000044783 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 OMA:WLHVADK EMBL:AADN02012423 IPI:IPI00821971
Ensembl:ENSGALT00000037886 Uniprot:F1NE28
Length = 458
Score = 230 (86.0 bits), Expect = 1.7e-36, Sum P(3) = 1.7e-36
Identities = 42/109 (38%), Positives = 72/109 (66%)
Query: 69 KSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFK--PGSDNTLVSVYPIQDQVY 126
++++Y++ +RIV+T FGT PDPC +IF R + FK +DN LV+VYP+ + Y
Sbjct: 10 RTDAYVRAMTEKRIVITEFGTYAYPDPCKNIFSRFFSYFKGVEVTDNALVNVYPVGEDYY 69
Query: 127 ALGDSNYMHRIDPATLDTLGKIDLAGDVTILHQTSHPLTTSDGETFNLG 175
A ++N++ +I+P TL+T+ ++DL V++ T+HP +DG +N+G
Sbjct: 70 ACTETNFITKINPDTLETIKQVDLCKYVSVNGATAHPHVENDGTVYNIG 118
Score = 190 (71.9 bits), Expect = 1.7e-36, Sum P(3) = 1.7e-36
Identities = 43/118 (36%), Positives = 67/118 (56%)
Query: 324 ETPRMN-GQHQGRSYTYFYAISADIDRDNPGTLIKVNVQNNTCKSWSQKDVYPSEPVFVA 382
E P++N ++ G+ YTY Y + ++ P L K+NV+ W + D YPSEP+FV+
Sbjct: 342 EFPQINYKKYGGKPYTYTYGLG--LNHFVPDRLCKLNVKTKETWVWQEPDSYPSEPIFVS 399
Query: 383 TPNARKEDEGVLLSVLLW-SHHPTRVSLLVLNARTMQELGRVNFTTPTPVPKCLHGWY 439
P+A +ED+GV+LS+++ P LL+LNA+ M E+ R PV HG +
Sbjct: 400 HPDALEEDDGVVLSIVISPGSGPKPAYLLILNAKDMSEVARAEVEVNIPVT--FHGLF 455
Score = 77 (32.2 bits), Expect = 1.7e-36, Sum P(3) = 1.7e-36
Identities = 25/94 (26%), Positives = 48/94 (51%)
Query: 223 HVLDKTNGSVVH-RFQADSFFYLHIINAYEDTNDGIVVDICCYRN-PAMLDCMYREALK- 279
HV +K G +++ +++ +F H IN +ED N ++VD+C ++ + + +Y L+
Sbjct: 215 HVAEKKKGRLLNIKYRTSAFNLFHHINTFED-NGFLIVDLCTWKGFEFVYNYLYLANLRA 273
Query: 280 NIHSTPRYAQMF-RARPLRFRLDLASPRTAPTGK 312
N + A+ + R+ L L + A TGK
Sbjct: 274 NWDEVKKQAEKAPQPEARRYVLPLRIDK-ADTGK 306
>TAIR|locus:2134093 [details] [associations]
symbol:CCD8 "carotenoid cleavage dioxygenase 8"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM;RCA;NAS] [GO:0009733 "response to auxin stimulus"
evidence=IMP] [GO:0010223 "secondary shoot formation"
evidence=IGI;IMP] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=ISS] [GO:0009570 "chloroplast
stroma" evidence=IDA] [GO:0009850 "auxin metabolic process"
evidence=IMP] [GO:0009965 "leaf morphogenesis" evidence=IMP]
[GO:0016121 "carotene catabolic process" evidence=IDA] [GO:0016124
"xanthophyll catabolic process" evidence=IDA] [GO:0009926 "auxin
polar transport" evidence=IMP] [GO:0009830 "cell wall modification
involved in abscission" evidence=RCA] GO:GO:0009570 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0009733 GO:GO:0009926 GO:GO:0046872
GO:GO:0016702 GO:GO:0009965 EMBL:AL161582 eggNOG:COG3670
OMA:ITENYIV InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
GO:GO:0016121 GO:GO:0010223 GO:GO:0016124 EMBL:AY074264
EMBL:AY133732 IPI:IPI00536697 PIR:T10688 RefSeq:NP_195007.2
UniGene:At.31633 ProteinModelPortal:Q8VY26 SMR:Q8VY26 STRING:Q8VY26
PRIDE:Q8VY26 EnsemblPlants:AT4G32810.1 GeneID:829417
KEGG:ath:AT4G32810 TAIR:At4g32810 HOGENOM:HOG000237971
InParanoid:Q8VY26 PhylomeDB:Q8VY26 ProtClustDB:CLSN2680232
BioCyc:ARA:AT4G32810-MONOMER BioCyc:MetaCyc:AT4G32810-MONOMER
Genevestigator:Q8VY26 Uniprot:Q8VY26
Length = 570
Score = 241 (89.9 bits), Expect = 1.3e-32, Sum P(2) = 1.3e-32
Identities = 69/231 (29%), Positives = 112/231 (48%)
Query: 223 HVLDKTNGSVVHRFQADSFFYLHIINAYE-DTN-DG---IVVDICCYRNP--AMLDCMYR 275
HV+ K G VV + ++ H INAYE D N DG +++ CC N +LD +
Sbjct: 350 HVMSKLTGEVVASVEVPAYVTFHFINAYEEDKNGDGKATVIIADCCEHNADTRILDMLRL 409
Query: 276 EALKNIHSTPRYAQMFRARPLRFRLDLASPRTAPTGKVRPSVICDV---GCETPRMNGQH 332
+ L++ H + + AR RFR+ L + GK+ +V + + +N +
Sbjct: 410 DTLRSSHG---HDVLPDARIGRFRIPLDGSKY---GKLETAVEAEKHGRAMDMCSINPLY 463
Query: 333 QGRSYTYFYAISADIDRDNPGTLIKVNVQNNTCKSWSQKDVYPSEPVFVATPNARKEDEG 392
G+ Y Y YA A + P L KV++ K+W + + PSEP FV P A ED+G
Sbjct: 464 LGQKYRYVYACGAQRPCNFPNALSKVDIVEKKVKNWHEHGMIPSEPFFVPRPGATHEDDG 523
Query: 393 VLLSVLLWSHHPTRVSLLVLNARTMQELGRVNFTTPTPVPKCLHGWYFPHE 443
V++S++ S ++L+ + +E+ R F P +P LHG + P +
Sbjct: 524 VVISIV--SEENGGSFAILLDGSSFEEIARAKF--PYGLPYGLHGCWIPKD 570
Score = 186 (70.5 bits), Expect = 1.3e-32, Sum P(2) = 1.3e-32
Identities = 53/165 (32%), Positives = 82/165 (49%)
Query: 13 TVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQCKFIKSES 72
TV+G IP+W++G +RNGPG WN+G+ F HLFD L + + G + + ++S++
Sbjct: 96 TVQGKIPTWLNGTYLRNGPGLWNIGDHDFRHLFDGYSTLVKLQFDGGRIFAAHRLLESDA 155
Query: 73 Y--IKNH---AARRIVVTGFGTRFVPDPCASIFQRIATLFKPGS--DNTLVSVYPIQD-Q 124
Y K H R T +P + I + I LF S DN V + D +
Sbjct: 156 YKAAKKHNRLCYREFSETPKSVIINKNPFSGIGE-IVRLFSGESLTDNANTGVIKLGDGR 214
Query: 125 VYALGDSNYMH-RIDPATLDTLGKIDLAGDVTILH--QTSHPLTT 166
V L ++ +D TL+T+GK + DV H Q++HP+ T
Sbjct: 215 VMCLTETQKGSILVDHETLETIGKFEY-DDVLSDHMIQSAHPIVT 258
>UNIPROTKB|Q83CU2 [details] [associations]
symbol:CBU_1011 "Lignostilbene-alpha,beta-dioxygenase"
species:227377 "Coxiella burnetii RSA 493" [GO:0008152 "metabolic
process" evidence=ISS] [GO:0016702 "oxidoreductase activity, acting
on single donors with incorporation of molecular oxygen,
incorporation of two atoms of oxygen" evidence=ISS] EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0016702 HOGENOM:HOG000232156
OMA:ITENYIV InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
RefSeq:NP_820017.1 GeneID:1208907 KEGG:cbu:CBU_1011 PATRIC:17930741
ProtClustDB:CLSK914477 BioCyc:CBUR227377:GJ7S-1002-MONOMER
Uniprot:Q83CU2
Length = 394
Score = 274 (101.5 bits), Expect = 1.3e-30, Sum P(2) = 1.3e-30
Identities = 69/224 (30%), Positives = 116/224 (51%)
Query: 220 TIFHVLDKTNGSVVHRFQADSFFYLHIINAYEDTNDGIVVDICCYRNPAMLDCMYREALK 279
T F++LD+ G ++ +SFF H +NA+E+ ND ++VDI Y N ++ +Y + L
Sbjct: 184 THFYLLDRKTGKF-QNYKTESFFAFHHVNAFEE-NDKVIVDIIAYPNTDIIQSLYLDVL- 240
Query: 280 NIHSTPRYAQMFRARPLRFRLDLASPRTAPTGKVRPSVICDVGCETPRMNG-QHQGRSYT 338
H + R+ ++L V V+ + E PR+N ++Y
Sbjct: 241 --HGETNKNIVSAGELRRYEINLLD------SSVNYVVLSEEPIELPRINYFLSNTKNYL 292
Query: 339 YFYAISADIDRDNP--GTLIKVNVQNNTCKSWSQKDVYPSEPVFVATPNARKEDEGVLLS 396
+ Y + +D + N L+K++VQ K W + YP EPVFV+ PNA+KED+GV+LS
Sbjct: 293 FVYGVGSDKNDPNNFLNRLLKIDVQQKATKIWKETMCYPGEPVFVSLPNAKKEDDGVILS 352
Query: 397 VLLWSHHPTRVSLLVLNARTMQELGRVNFTTPTPVPKCLHGWYF 440
V+L + LL+L+A + +E+ R + P +P HG ++
Sbjct: 353 VVLNAQKGNSF-LLILDAVSFKEIARAS--VPHHIPFGFHGQFY 393
Score = 110 (43.8 bits), Expect = 1.3e-30, Sum P(2) = 1.3e-30
Identities = 36/119 (30%), Positives = 57/119 (47%)
Query: 74 IKNHAARRIVVTG-FG-TRFVPDPCASIFQRIATLFKPG-SDNTLVSVYPIQDQVYALGD 130
+++ A R + G G + F DPC SIF+R F P +DN V+V I D+ AL +
Sbjct: 1 MESDAYRYVKAKGKMGYSEFATDPCRSIFKRFFQAFSPRPTDNANVNVSMIADKFVALTE 60
Query: 131 SNYMHRIDPATLDTLGKID----LAGDVTILHQTSHPLTTSDGETFNLGVTLRPTGPRY 185
+ DP TL+ +G I+ L G++T H + T +G + + + T Y
Sbjct: 61 TPMPIVFDPQTLERMGVINYEDKLKGNLTTAHP-HYDFETKEGINYLTVFSAKSTSQIY 118
>TIGR_CMR|CBU_1011 [details] [associations]
symbol:CBU_1011 "dioxygenase, putative" species:227377
"Coxiella burnetii RSA 493" [GO:0008152 "metabolic process"
evidence=ISS] [GO:0016702 "oxidoreductase activity, acting on
single donors with incorporation of molecular oxygen, incorporation
of two atoms of oxygen" evidence=ISS] EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0016702 HOGENOM:HOG000232156
OMA:ITENYIV InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
RefSeq:NP_820017.1 GeneID:1208907 KEGG:cbu:CBU_1011 PATRIC:17930741
ProtClustDB:CLSK914477 BioCyc:CBUR227377:GJ7S-1002-MONOMER
Uniprot:Q83CU2
Length = 394
Score = 274 (101.5 bits), Expect = 1.3e-30, Sum P(2) = 1.3e-30
Identities = 69/224 (30%), Positives = 116/224 (51%)
Query: 220 TIFHVLDKTNGSVVHRFQADSFFYLHIINAYEDTNDGIVVDICCYRNPAMLDCMYREALK 279
T F++LD+ G ++ +SFF H +NA+E+ ND ++VDI Y N ++ +Y + L
Sbjct: 184 THFYLLDRKTGKF-QNYKTESFFAFHHVNAFEE-NDKVIVDIIAYPNTDIIQSLYLDVL- 240
Query: 280 NIHSTPRYAQMFRARPLRFRLDLASPRTAPTGKVRPSVICDVGCETPRMNG-QHQGRSYT 338
H + R+ ++L V V+ + E PR+N ++Y
Sbjct: 241 --HGETNKNIVSAGELRRYEINLLD------SSVNYVVLSEEPIELPRINYFLSNTKNYL 292
Query: 339 YFYAISADIDRDNP--GTLIKVNVQNNTCKSWSQKDVYPSEPVFVATPNARKEDEGVLLS 396
+ Y + +D + N L+K++VQ K W + YP EPVFV+ PNA+KED+GV+LS
Sbjct: 293 FVYGVGSDKNDPNNFLNRLLKIDVQQKATKIWKETMCYPGEPVFVSLPNAKKEDDGVILS 352
Query: 397 VLLWSHHPTRVSLLVLNARTMQELGRVNFTTPTPVPKCLHGWYF 440
V+L + LL+L+A + +E+ R + P +P HG ++
Sbjct: 353 VVLNAQKGNSF-LLILDAVSFKEIARAS--VPHHIPFGFHGQFY 393
Score = 110 (43.8 bits), Expect = 1.3e-30, Sum P(2) = 1.3e-30
Identities = 36/119 (30%), Positives = 57/119 (47%)
Query: 74 IKNHAARRIVVTG-FG-TRFVPDPCASIFQRIATLFKPG-SDNTLVSVYPIQDQVYALGD 130
+++ A R + G G + F DPC SIF+R F P +DN V+V I D+ AL +
Sbjct: 1 MESDAYRYVKAKGKMGYSEFATDPCRSIFKRFFQAFSPRPTDNANVNVSMIADKFVALTE 60
Query: 131 SNYMHRIDPATLDTLGKID----LAGDVTILHQTSHPLTTSDGETFNLGVTLRPTGPRY 185
+ DP TL+ +G I+ L G++T H + T +G + + + T Y
Sbjct: 61 TPMPIVFDPQTLERMGVINYEDKLKGNLTTAHP-HYDFETKEGINYLTVFSAKSTSQIY 118
>ASPGD|ASPL0000049803 [details] [associations]
symbol:AN1704 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] EMBL:BN001307 GO:GO:0016702 EMBL:AACD01000026
eggNOG:COG3670 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
RefSeq:XP_659308.1 ProteinModelPortal:Q5BCM6
EnsemblFungi:CADANIAT00008347 GeneID:2875405 KEGG:ani:AN1704.2
HOGENOM:HOG000166169 OrthoDB:EOG4WDHM3 Uniprot:Q5BCM6
Length = 575
Score = 141 (54.7 bits), Expect = 1.0e-18, Sum P(3) = 1.0e-18
Identities = 43/135 (31%), Positives = 67/135 (49%)
Query: 293 ARPLRFRLDLASPRT-APTGKVRPSVICD-VGCETPRMNGQHQGRSYTYFYAIS-ADIDR 349
A P+ R + P AP + S C + E +N + + Y YA++ +
Sbjct: 419 AIPVSSRREGEEPEPLAPLKAILVSTACHALSPELATLNPFYITHPHRYTYAVTDRGLST 478
Query: 350 DNPGTLIKVNVQNNTCKSWSQKDVYPSEPVFVATPNARKEDEGVLLSVLLWSHHPTRVSL 409
G ++K + K WS+ P E +FVA P+ ++ED+GVLLSV+L R L
Sbjct: 479 FVDG-IVKFDSLTGETKLWSEHAQSPGEAIFVADPDGKEEDDGVLLSVVL-DGRSGRSYL 536
Query: 410 LVLNARTMQELGRVN 424
LVL+A M+E+GR +
Sbjct: 537 LVLDAGNMKEIGRAS 551
Score = 114 (45.2 bits), Expect = 1.0e-18, Sum P(3) = 1.0e-18
Identities = 36/124 (29%), Positives = 56/124 (45%)
Query: 3 NSEVDQPVQGTVEGVIPSWIDGVLIRNGPGSWNVGEE---SFD--HLFDCSGLLHRFKI- 56
N E P++ +V G IP + G L R GPG + V + +F H FD HRF++
Sbjct: 25 NHEQKTPIELSVTGSIPHYAAGTLYRTGPGRYKVDTKHGNTFQVSHWFDGFSQTHRFQLV 84
Query: 57 ------SSGLVTYQCKFIKSESYIKNHAARRIVVT-GFGTRFVPDPCASIFQRIATLFKP 109
SS V Y +F + H + FG F DPC +I+ ++ + ++P
Sbjct: 85 PPESPDSSMRVLYNSRFSTDDMIEYAHETGSLGDRFSFGG-FSSDPCEAIYSKVQSTYEP 143
Query: 110 GSDN 113
D+
Sbjct: 144 RHDS 147
Score = 90 (36.7 bits), Expect = 1.0e-18, Sum P(3) = 1.0e-18
Identities = 22/74 (29%), Positives = 41/74 (55%)
Query: 222 FHVLDKTNGSVVHRFQADSFFYLHIINAYEDTND---------GIVVDICCYRNPAMLDC 272
++V+D+ +G +V +++ +FF H INA+++T++ IV + Y NP +L
Sbjct: 323 WYVVDRRHGGLVAVYESQAFFCFHTINAWQETSNPSDSSTSQLDIVAECIMYENPDILHK 382
Query: 273 MYREALKNIHSTPR 286
+Y E L + S R
Sbjct: 383 LYYEYLVSSSSAGR 396
>UNIPROTKB|Q746V1 [details] [associations]
symbol:GSU3417 "Dioxygenase, putative" species:243231
"Geobacter sulfurreducens PCA" [GO:0008150 "biological_process"
evidence=ND] [GO:0016491 "oxidoreductase activity" evidence=ISS]
[GO:0055114 "oxidation-reduction process" evidence=ISS]
GO:GO:0016491 InterPro:IPR006311 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0016702 PROSITE:PS51318
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
HOGENOM:HOG000254835 InterPro:IPR019546 TIGRFAMs:TIGR01409
RefSeq:NP_954457.1 ProteinModelPortal:Q746V1 GeneID:2686608
KEGG:gsu:GSU3417 PATRIC:22029691 KO:K00464 OMA:INIAERS
ProtClustDB:CLSK743204 BioCyc:GSUL243231:GH27-3391-MONOMER
Uniprot:Q746V1
Length = 509
Score = 165 (63.1 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16
Identities = 45/174 (25%), Positives = 85/174 (48%)
Query: 11 QGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQCKFIKS 70
+ VEG IP+ + G L RNGP ++ G L D G++ F+ + Y +F+++
Sbjct: 57 EARVEGTIPAGLRGTLYRNGPALFDRGGMRKRTLLDGDGMVQAFRFGDRGIRYANRFVRT 116
Query: 71 ESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFKPGSDNTLVSVYPIQDQVYALGD 130
+++ AA R + + T+ +++ L + G ++V+P + ++YA +
Sbjct: 117 RKFVEEEAAGRFLHPTWSTQAPGGIWTNVWPTERLLSQAG-----ITVFPWRGRLYAFDE 171
Query: 131 SNYMHRIDPATLDTLGK--IDLAGDVTIL--HQTSHPLTTSDGETFNLGVTLRP 180
S++ + +DP TL T+G+ L D+T H P+T GE + G+ P
Sbjct: 172 SSFPYELDPDTLATVGETTFGLPRDLTTYSAHGKFDPVT---GEWLHFGIRYGP 222
Score = 113 (44.8 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16
Identities = 61/263 (23%), Positives = 103/263 (39%)
Query: 184 RYCILQLNDA-FSY-PDLSHXXXXXXSLRFRDDIDMTSTIFHVLDKTNGSVVHRFQADSF 241
R+ + L+ +Y P L SLR+R + TI V ++ + + ++
Sbjct: 259 RHVVFHLHPVEIAYWPFLLGIRSMAESLRWRPE---RGTILMVAERDGEAPPRLVETEAC 315
Query: 242 FYLHIINAYEDTNDGIVVDICCYRNPAMLDCMYREALKNIHSTPRYAQMFRARPLRFRLD 301
+ H NA+E+ I D YRNP + + R + +R+R+D
Sbjct: 316 YLWHTFNAWEERGK-ITADFVGYRNPDHF-ISDDPVITAVMLGRRGTYSYPGEVMRYRID 373
Query: 302 LASPRTAPTGKVRPSVICDVGCETPRMNGQHQGRSYTYFYAISADIDRDNPGTLIKVNVQ 361
A G V+ CE PR++ + + R + Y + ++ ++
Sbjct: 374 PAR------GTAAREVLHQGSCEWPRIDERLRCRPHRTGYMLRCLPGEFFWSIVMGLDPV 427
Query: 362 NNTCKSWS-QKDVYPSEPVFVATPNARKEDEGVLLSVLLWSHHPTRVSLLVLNARTMQE- 419
+S + VY +EPVF P+ G LL V L+ SL +L+A + +
Sbjct: 428 TGRTDEYSFGRGVYCTEPVFAPRPDTLAGGPGWLL-VELYDSRTRTSSLAILDADRIADG 486
Query: 420 -LGRVNFTTPTPVPKCLHGWYFP 441
L V T VP HGW+ P
Sbjct: 487 PLALVRLTHH--VPFSYHGWWQP 507
>TIGR_CMR|GSU_3417 [details] [associations]
symbol:GSU_3417 "dioxygenase, putative" species:243231
"Geobacter sulfurreducens PCA" [GO:0008150 "biological_process"
evidence=ND] [GO:0016491 "oxidoreductase activity" evidence=ISS]
GO:GO:0016491 InterPro:IPR006311 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0016702 PROSITE:PS51318
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
HOGENOM:HOG000254835 InterPro:IPR019546 TIGRFAMs:TIGR01409
RefSeq:NP_954457.1 ProteinModelPortal:Q746V1 GeneID:2686608
KEGG:gsu:GSU3417 PATRIC:22029691 KO:K00464 OMA:INIAERS
ProtClustDB:CLSK743204 BioCyc:GSUL243231:GH27-3391-MONOMER
Uniprot:Q746V1
Length = 509
Score = 165 (63.1 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16
Identities = 45/174 (25%), Positives = 85/174 (48%)
Query: 11 QGTVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQCKFIKS 70
+ VEG IP+ + G L RNGP ++ G L D G++ F+ + Y +F+++
Sbjct: 57 EARVEGTIPAGLRGTLYRNGPALFDRGGMRKRTLLDGDGMVQAFRFGDRGIRYANRFVRT 116
Query: 71 ESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFKPGSDNTLVSVYPIQDQVYALGD 130
+++ AA R + + T+ +++ L + G ++V+P + ++YA +
Sbjct: 117 RKFVEEEAAGRFLHPTWSTQAPGGIWTNVWPTERLLSQAG-----ITVFPWRGRLYAFDE 171
Query: 131 SNYMHRIDPATLDTLGK--IDLAGDVTIL--HQTSHPLTTSDGETFNLGVTLRP 180
S++ + +DP TL T+G+ L D+T H P+T GE + G+ P
Sbjct: 172 SSFPYELDPDTLATVGETTFGLPRDLTTYSAHGKFDPVT---GEWLHFGIRYGP 222
Score = 113 (44.8 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16
Identities = 61/263 (23%), Positives = 103/263 (39%)
Query: 184 RYCILQLNDA-FSY-PDLSHXXXXXXSLRFRDDIDMTSTIFHVLDKTNGSVVHRFQADSF 241
R+ + L+ +Y P L SLR+R + TI V ++ + + ++
Sbjct: 259 RHVVFHLHPVEIAYWPFLLGIRSMAESLRWRPE---RGTILMVAERDGEAPPRLVETEAC 315
Query: 242 FYLHIINAYEDTNDGIVVDICCYRNPAMLDCMYREALKNIHSTPRYAQMFRARPLRFRLD 301
+ H NA+E+ I D YRNP + + R + +R+R+D
Sbjct: 316 YLWHTFNAWEERGK-ITADFVGYRNPDHF-ISDDPVITAVMLGRRGTYSYPGEVMRYRID 373
Query: 302 LASPRTAPTGKVRPSVICDVGCETPRMNGQHQGRSYTYFYAISADIDRDNPGTLIKVNVQ 361
A G V+ CE PR++ + + R + Y + ++ ++
Sbjct: 374 PAR------GTAAREVLHQGSCEWPRIDERLRCRPHRTGYMLRCLPGEFFWSIVMGLDPV 427
Query: 362 NNTCKSWS-QKDVYPSEPVFVATPNARKEDEGVLLSVLLWSHHPTRVSLLVLNARTMQE- 419
+S + VY +EPVF P+ G LL V L+ SL +L+A + +
Sbjct: 428 TGRTDEYSFGRGVYCTEPVFAPRPDTLAGGPGWLL-VELYDSRTRTSSLAILDADRIADG 486
Query: 420 -LGRVNFTTPTPVPKCLHGWYFP 441
L V T VP HGW+ P
Sbjct: 487 PLALVRLTHH--VPFSYHGWWQP 507
>UNIPROTKB|I3LRK8 [details] [associations]
symbol:BCMO1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003834 "beta-carotene 15,15'-monooxygenase activity"
evidence=IEA] [GO:0001523 "retinoid metabolic process"
evidence=IEA] GO:GO:0001523 GeneTree:ENSGT00500000044783
GO:GO:0003834 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
Ensembl:ENSSSCT00000027134 OMA:MARINDF Uniprot:I3LRK8
Length = 181
Score = 200 (75.5 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 46/130 (35%), Positives = 75/130 (57%)
Query: 314 RPSVICDVGCETPRMNGQHQGRSYTYFYAISADIDRDN-PGTLIKVNVQNNTCKSWSQKD 372
+P ++C G E PR+N + G+ Y Y +A A++ P +IK ++ + SW +
Sbjct: 30 QPELLCK-GLELPRINYAYNGKPYRYVFA--AEVQWSPIPTKVIKYDLLTKSSLSWGEAH 86
Query: 373 VYPSEPVFVATPNARKEDEGVLLSVLLWSHHPTRVS-LLVLNARTMQELGRVNFTTPTPV 431
+P+EP+FV TP AR ED+G++LS ++ S P ++ LLVL+A+T EL R + +
Sbjct: 87 CWPAEPLFVPTPGARDEDDGIILSAIV-STDPQKLPFLLVLDAKTFTELARASVDVDMHL 145
Query: 432 PKCLHGWYFP 441
LHG + P
Sbjct: 146 D--LHGLFIP 153
>UNIPROTKB|G4MX63 [details] [associations]
symbol:MGG_08016 "Retinal pigment epithelial membrane
family protein" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] EMBL:CM001232
RefSeq:XP_003714968.1 ProteinModelPortal:G4MX63
EnsemblFungi:MGG_08016T0 GeneID:2678282 KEGG:mgr:MGG_08016
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055 Uniprot:G4MX63
Length = 558
Score = 131 (51.2 bits), Expect = 7.1e-15, Sum P(3) = 7.1e-15
Identities = 56/194 (28%), Positives = 91/194 (46%)
Query: 251 EDTND-GIVVDICCYRNPAMLDCMYREALKNIHSTPRYAQ-------MFRARPLRFRLD- 301
ED ++ IV D+C + N +D + R + N+ S A+ + AR R+RL
Sbjct: 351 EDASEVDIVADVCTFDN---IDSITRLYIDNLLSDSPAAKKRCEEDRFWSARYSRYRLAG 407
Query: 302 -LASPRTAPTGKVRPSVI-----CDVGC-ETPRMNGQHQGRSYTYFYAISADIDRDNPGT 354
+S + T K + + ++G E P +N ++ R + + Y ++A
Sbjct: 408 VPSSGKGDETTKPKRVQLEYQGAAELGGPELPSINEAYRARKHRFVYGVTATGKSTFLDG 467
Query: 355 LIKVNVQNNTCKSWSQKDVYPSEPVFVATPNARK----EDEGVLLSVLLWSHHPTRVSLL 410
L+K++V WS+ SEP+FVA P+ ED GVLL+V+L LL
Sbjct: 468 LVKLDVDTGETICWSRPGQTASEPIFVADPDPSVYGILEDAGVLLTVVLDGIQGESY-LL 526
Query: 411 VLNARTMQELGRVN 424
VLNA+ M E+ R +
Sbjct: 527 VLNAKDMTEVARAD 540
Score = 111 (44.1 bits), Expect = 7.1e-15, Sum P(3) = 7.1e-15
Identities = 37/118 (31%), Positives = 57/118 (48%)
Query: 8 QPVQGTVEGVIPSWIDGVLIRNGPGSWNV-----GEESF----DHLFDCSGLLHRFKISS 58
+P + TV+G IP++ GVL RNG G +V GE++ H FD +HRF+I +
Sbjct: 24 EPKELTVKGDIPAYCAGVLFRNGLGPRSVETDKNGEKTTVYKTSHWFDSFAQVHRFQIHA 83
Query: 59 GLV-TYQCKFIKSESYIKNHAARRIVVTG------FGTRFVPDPCASIFQRIATLFKP 109
+ + + + + R+ TG FG + DPC S+FQ+ LF P
Sbjct: 84 PTPDSPKVRVTHNSRLTSDGVVERVKRTGSLNDFTFGAK--RDPCKSLFQKAQALFAP 139
Score = 80 (33.2 bits), Expect = 1.7e-09, Sum P(3) = 1.7e-09
Identities = 23/69 (33%), Positives = 36/69 (52%)
Query: 224 VLDKTNGS--VVHRFQADSFFYLHIINAYEDTNDG-------IVVDICCYRNPAMLDCMY 274
V+D+ G +V F++D+F+ H INAYE G IV D+C + N +D +
Sbjct: 316 VIDRKPGGRGLVKTFESDAFYAFHTINAYEVEGKGEDASEVDIVADVCTFDN---IDSIT 372
Query: 275 REALKNIHS 283
R + N+ S
Sbjct: 373 RLYIDNLLS 381
Score = 66 (28.3 bits), Expect = 7.1e-15, Sum P(3) = 7.1e-15
Identities = 19/56 (33%), Positives = 28/56 (50%)
Query: 130 DSNYMHRIDPATLDTLGKI-------DLAGDVTILHQTSHPLTTSDGETFNLGVTL 178
DS M +DP TL+ +G DLAG ++ H ++ P T G+ FN + L
Sbjct: 184 DSTMMQALDPETLEPIGVASQKRLHPDLAGPLSAAHASTCPKT---GDVFNYNLEL 236
>TAIR|locus:2134796 [details] [associations]
symbol:NCED4 "nine-cis-epoxycarotenoid dioxygenase 4"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010287 "plastoglobule" evidence=IDA] [GO:0009718
"anthocyanin-containing compound biosynthetic process"
evidence=RCA] EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
EMBL:AL021687 EMBL:AL161550 GO:GO:0016702 GO:GO:0010287
eggNOG:COG3670 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
HOGENOM:HOG000254836 EMBL:AY136353 EMBL:BT008785 EMBL:AY056789
EMBL:AK227175 IPI:IPI00536835 PIR:T04438 RefSeq:NP_193652.1
UniGene:At.1927 UniGene:At.67316 ProteinModelPortal:O49675
SMR:O49675 IntAct:O49675 STRING:O49675 PaxDb:O49675 PRIDE:O49675
EnsemblPlants:AT4G19170.1 GeneID:827655 KEGG:ath:AT4G19170
TAIR:At4g19170 InParanoid:O49675 KO:K09840 OMA:HGAWVPR
PhylomeDB:O49675 ProtClustDB:CLSN2685496 Genevestigator:O49675
Uniprot:O49675
Length = 595
Score = 156 (60.0 bits), Expect = 9.8e-10, Sum P(2) = 9.8e-10
Identities = 48/173 (27%), Positives = 86/173 (49%)
Query: 14 VEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQCKFIKSESY 73
+ G +P ++G IRNGP + + HLFD G+LH KI +G T +++K+ Y
Sbjct: 130 IHGTLPLSLNGAYIRNGPNPQFLPRGPY-HLFDGDGMLHAIKIHNGKATLCSRYVKTYKY 188
Query: 74 -IKNHAARRI---VVTGFG--TRFVPDPCASIFQRIATLFKP----GSDNTLVSVYPIQD 123
++ + V +GF T V + + + + P G NT ++ + +
Sbjct: 189 NVEKQTGAPVMPNVFSGFNGVTASVARGALTAARVLTGQYNPVNGIGLANTSLAFF--SN 246
Query: 124 QVYALGDSN--YMHRI-DPATLDTLGKIDLAGDVTILHQTSHPLTTS-DGETF 172
+++ALG+S+ Y R+ + ++T+G+ D G + + T+HP T GETF
Sbjct: 247 RLFALGESDLPYAVRLTESGDIETIGRYDFDGKLA-MSMTAHPKTDPITGETF 298
Score = 61 (26.5 bits), Expect = 9.8e-10, Sum P(2) = 9.8e-10
Identities = 51/219 (23%), Positives = 88/219 (40%)
Query: 236 FQADSFFYLHIINAYEDTNDGIVVDICCYRNPAMLDCMYR-EALKNIHSTPRYAQM---- 290
F+ F +H INA+++ + VV I P ++ + E + +H+ ++
Sbjct: 395 FEVPGFNIIHAINAWDEDDGNSVVLIA----PNIMSIEHTLERMDLVHALVEKVKIDLVT 450
Query: 291 --FRARPLRFR-LDLASPRTAPTGKVRPSVICDVGCETPRMNGQHQGRSYTYFYAISADI 347
R P+ R LD A A G+ V +G P+++G + D+
Sbjct: 451 GIVRRHPISARNLDFAVINPAFLGRCSRYVYAAIGDPMPKISG-----------VVKLDV 499
Query: 348 DR-DNPGTLIKVNVQNNTCKSWSQKDVYPSEPVFVA----TPNARKEDEGVLLSVLLWSH 402
+ D + + + C Y EP FVA P A +ED+G +++ +
Sbjct: 500 SKGDRDDCTVARRMYGSGC--------YGGEPFFVARDPGNPEA-EEDDGYVVTYV--HD 548
Query: 403 HPTRVS-LLVLNARTMQELGRVNFTT-PTPVPKCLHGWY 439
T S LV++A++ EL V P VP HG +
Sbjct: 549 EVTGESKFLVMDAKS-PELEIVAAVRLPRRVPYGFHGLF 586
>TAIR|locus:2202492 [details] [associations]
symbol:NCED5 "nine-cis-epoxycarotenoid dioxygenase 5"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM] [GO:0009579 "thylakoid" evidence=IDA] [GO:0009688
"abscisic acid biosynthetic process" evidence=IMP;TAS] [GO:0045549
"9-cis-epoxycarotenoid dioxygenase activity" evidence=TAS]
[GO:0009414 "response to water deprivation" evidence=IGI]
[GO:0010162 "seed dormancy process" evidence=IGI] EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0009414 GO:GO:0009688
GO:GO:0009579 GO:GO:0009535 eggNOG:COG3670 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 GO:GO:0010162 HOGENOM:HOG000254836
GO:GO:0045549 KO:K09840 EMBL:AC074176 ProtClustDB:PLN02258
EMBL:AK226774 IPI:IPI00530821 PIR:A86425 RefSeq:NP_174302.1
UniGene:At.51834 ProteinModelPortal:Q9C6Z1 SMR:Q9C6Z1 IntAct:Q9C6Z1
STRING:Q9C6Z1 EnsemblPlants:AT1G30100.1 GeneID:839889
KEGG:ath:AT1G30100 TAIR:At1g30100 InParanoid:Q9C6Z1 OMA:PTYVLHF
PhylomeDB:Q9C6Z1 Genevestigator:Q9C6Z1 Uniprot:Q9C6Z1
Length = 589
Score = 138 (53.6 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 47/166 (28%), Positives = 75/166 (45%)
Query: 13 TVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQCKFIKSES 72
+V+G IP IDGV +RNG S HLFD G++H KI++G +Y C+F ++E
Sbjct: 130 SVDGKIPDCIDGVYLRNGANPL-FEPVSGHHLFDGDGMVHAVKITNGDASYSCRFTETER 188
Query: 73 YIKN-HAARRIVVTGFGTRFVPDPCASIFQRIAT-LF-----KPGSDNTLVSVYPIQDQV 125
++ I G A + A LF K G+ + D++
Sbjct: 189 LVQEKQLGSPIFPKAIGELHGHSGIARLMLFYARGLFGLLNHKNGTGVANAGLVYFHDRL 248
Query: 126 YALGDSN--YMHRI-DPATLDTLGKIDLAGDVT---ILHQTSHPLT 165
A+ + + Y R+ D L+T+G+ D G ++ I H P+T
Sbjct: 249 LAMSEDDLPYQVRVTDNGDLETIGRFDFDGQLSSAMIAHPKIDPVT 294
Score = 80 (33.2 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 49/203 (24%), Positives = 86/203 (42%)
Query: 242 FYLHIINAYE--DTNDGIVVDICCYRNPAMLDCMYREALKNIHSTPRYAQMFRARPLRFR 299
F H+ NA+E +T++ +V+ C PA D ++ E + ++S + R L +
Sbjct: 398 FCFHLWNAWESPETDEVVVIGSCM--TPA--DSIFNECDEQLNSV-----LSEIR-LNLK 447
Query: 300 LDLASPRTAPTGKVRPSVICDVGCETPRMNGQHQGRSYTYFYAISADIDRDNPGTLIKVN 359
++ RT G V+ ++ E +N GR Y Y A+ G KV+
Sbjct: 448 TGKSTRRTIIPGSVQMNL------EAGMVNRNLLGRKTRYAYLAIAEPWPKVSG-FAKVD 500
Query: 360 VQNNTCKS--WSQKDVYPSEPVFVATP-NARKEDEGVLLSVLLWSHHPTRVSLLVLNART 416
+ K+ + K Y EP F+ + ED+G ++S + L ++NA T
Sbjct: 501 LSTGEVKNHFYGGKK-YGGEPFFLPRGLESDGEDDGYIMS-FVHDEESWESELHIVNAVT 558
Query: 417 MQELGRVNFTTPTPVPKCLHGWY 439
++ V P+ VP HG +
Sbjct: 559 LELEATVKL--PSRVPYGFHGTF 579
>TAIR|locus:2124489 [details] [associations]
symbol:NCED2 "nine-cis-epoxycarotenoid dioxygenase 2"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM] [GO:0045549 "9-cis-epoxycarotenoid dioxygenase
activity" evidence=ISS;IDA] [GO:0009535 "chloroplast thylakoid
membrane" evidence=IDA] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0009688 "abscisic acid biosynthetic process"
evidence=ISS] GO:GO:0009570 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0046872 GO:GO:0009688 GO:GO:0009535 EMBL:AL161548
eggNOG:COG3670 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
HOGENOM:HOG000254836 GO:GO:0045549 KO:K09840 EMBL:AL021710
EMBL:BT030365 IPI:IPI00523545 PIR:T04531 RefSeq:NP_193569.1
UniGene:At.32916 ProteinModelPortal:O49505 SMR:O49505 STRING:O49505
EnsemblPlants:AT4G18350.1 GeneID:827562 KEGG:ath:AT4G18350
TAIR:At4g18350 InParanoid:O49505 OMA:MNAWEDG PhylomeDB:O49505
ProtClustDB:PLN02258 BioCyc:MetaCyc:AT4G18350-MONOMER
Genevestigator:O49505 Uniprot:O49505
Length = 583
Score = 137 (53.3 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 30/71 (42%), Positives = 40/71 (56%)
Query: 13 TVEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQCKFIKSES 72
TVEG IP IDGV IRNG + HLFD G++H KI++G +Y C+F K+E
Sbjct: 123 TVEGTIPDCIDGVYIRNGANPM-FEPTAGHHLFDGDGMVHAVKITNGSASYACRFTKTER 181
Query: 73 YIKNHAARRIV 83
++ R V
Sbjct: 182 LVQEKRLGRPV 192
Score = 69 (29.3 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 53/222 (23%), Positives = 93/222 (41%)
Query: 226 DKTNGSVVHRFQADSFFYLHIINAYE--DTNDGIVVDICCYRNPAMLDCMYREALKNIHS 283
D T S + + F H+ NA+E +T + +V+ C +PA D ++ E +++ S
Sbjct: 375 DATEASQIIWVNSPETFCFHLWNAWESPETEEIVVIGSCM--SPA--DSIFNERDESLRS 430
Query: 284 TPRYAQMFRARPLRFRLDLASPRTAPTGKVRPSVICDVGCETPRMNGQHQGRSYTY-FYA 342
R++L RT T + V DV E +N GR + F A
Sbjct: 431 VLS----------EIRINL---RTRKTTRRSLLVNEDVNLEIGMVNRNRLGRKTRFAFLA 477
Query: 343 ISADIDRDNPGTLIKVNVQNNTCKSWSQK-DVYPSEPVFVA--TPNARK-EDEGVLLSVL 398
I+ + + G KV++ K + + Y EP F+ + N + ED+G + +
Sbjct: 478 IAYPWPKVS-G-FAKVDLCTGEMKKYIYGGEKYGGEPFFLPGNSGNGEENEDDGYIFCHV 535
Query: 399 LWSHHPTRVS-LLVLNARTMQELGRVNFTTPTPVPKCLHGWY 439
T+ S L ++NA ++ + P+ VP HG +
Sbjct: 536 --HDEETKTSELQIINAVNLKLEATIKL--PSRVPYGFHGTF 573
>TAIR|locus:2093751 [details] [associations]
symbol:NCED6 "nine-cis-epoxycarotenoid dioxygenase 6"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM] [GO:0045549 "9-cis-epoxycarotenoid dioxygenase
activity" evidence=IDA;TAS] [GO:0009535 "chloroplast thylakoid
membrane" evidence=IDA] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0009688 "abscisic acid biosynthetic process"
evidence=RCA;TAS] [GO:0009639 "response to red or far red light"
evidence=IEP] [GO:0010114 "response to red light" evidence=IEP]
[GO:0016114 "terpenoid biosynthetic process" evidence=RCA]
GO:GO:0009570 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0010114 GO:GO:0009688 GO:GO:0009535 eggNOG:COG3670
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
HOGENOM:HOG000254836 GO:GO:0045549 KO:K09840 EMBL:AB028621
ProtClustDB:PLN02258 IPI:IPI00526624 RefSeq:NP_189064.1
UniGene:At.37572 ProteinModelPortal:Q9LRM7 SMR:Q9LRM7 STRING:Q9LRM7
PaxDb:Q9LRM7 EnsemblPlants:AT3G24220.1 GeneID:822008
KEGG:ath:AT3G24220 TAIR:At3g24220 InParanoid:Q9LRM7 OMA:AWEERTE
PhylomeDB:Q9LRM7 BioCyc:MetaCyc:AT3G24220-MONOMER
Genevestigator:Q9LRM7 Uniprot:Q9LRM7
Length = 577
Score = 105 (42.0 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 49/187 (26%), Positives = 80/187 (42%)
Query: 9 PVQGTVE--GVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKIS-SGLVTYQC 65
PVQ +E G IPS + GV IRNG + HLFD G++H I V+Y C
Sbjct: 112 PVQNGLEVVGQIPSCLKGVYIRNGANPM-FPPLAGHHLFDGDGMIHAVSIGFDNQVSYSC 170
Query: 66 KFIKSESYIKNHA-ARRIVVTGFGTRFVPDPCA--SIFQRIATL-FKPGSDNTLVS---V 118
++ K+ ++ A R + G A ++F A + G+ V+ V
Sbjct: 171 RYTKTNRLVQETALGRSVFPKPIGELHGHSGLARLALFTARAGIGLVDGTRGMGVANAGV 230
Query: 119 YPIQDQVYALGDSN--YMHRID-PATLDTLGKI--DLAGDVTILHQTSHPLTTSDGETFN 173
++ A+ + + Y +ID L+T+G+ D D +++ TT D T +
Sbjct: 231 VFFNGRLLAMSEDDLPYQVKIDGQGDLETIGRFGFDDQIDSSVIAHPKVDATTGDLHTLS 290
Query: 174 LGVTLRP 180
V +P
Sbjct: 291 YNVLKKP 297
Score = 100 (40.3 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 52/222 (23%), Positives = 91/222 (40%)
Query: 222 FHVLDKTN--GSVVHRFQADSFFYLHIINAYED-TNDGIVVDICCYRNPAMLDCMYREAL 278
F VL K + GS ++ F H+ NA+E+ T +G V + + D ++ E+
Sbjct: 365 FGVLSKQDLTGSDINWVDVPDCFCFHLWNAWEERTEEGDPVIVVIGSCMSPPDTIFSES- 423
Query: 279 KNIHSTPRYAQMFRARPLRFRLDLASPRTAPTGKVRPSVICDVGCETPRMNGQHQGRSYT 338
+ R RL++ RT + R ++ V E +N + GR
Sbjct: 424 ---------GEPTRVELSEIRLNM---RTKESN--RKVIVTGVNLEAGHINRSYVGRKSQ 469
Query: 339 YFYAISADIDRDNPGTLIKVNVQNNTCKSWSQ-KDVYPSEPVFVATPNARKEDEGVLLSV 397
+ Y AD G + KV++QN T ++ + EP FV +ED+G ++
Sbjct: 470 FVYIAIADPWPKCSG-IAKVDIQNGTVSEFNYGPSRFGGEPCFVPEGEG-EEDKGYVMGF 527
Query: 398 LLWSHHPTRVSLLVLNARTMQELGRVNFTTPTPVPKCLHGWY 439
+ +V++A M+++ V P VP HG +
Sbjct: 528 VR-DEEKDESEFVVVDATDMKQVAAVRL--PERVPYGFHGTF 566
>TAIR|locus:2087418 [details] [associations]
symbol:CCD1 "carotenoid cleavage dioxygenase 1"
species:3702 "Arabidopsis thaliana" [GO:0005737 "cytoplasm"
evidence=ISM;IDA] [GO:0009414 "response to water deprivation"
evidence=IEP] [GO:0016118 "carotenoid catabolic process"
evidence=IDA] [GO:0045549 "9-cis-epoxycarotenoid dioxygenase
activity" evidence=IDA] [GO:0005773 "vacuole" evidence=IDA]
[GO:0016121 "carotene catabolic process" evidence=IMP] [GO:0016124
"xanthophyll catabolic process" evidence=IMP] [GO:0005774 "vacuolar
membrane" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0005794 "Golgi
apparatus" evidence=IDA] [GO:0006098 "pentose-phosphate shunt"
evidence=RCA] [GO:0006636 "unsaturated fatty acid biosynthetic
process" evidence=RCA] [GO:0006655 "phosphatidylglycerol
biosynthetic process" evidence=RCA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA]
[GO:0015995 "chlorophyll biosynthetic process" evidence=RCA]
[GO:0016117 "carotenoid biosynthetic process" evidence=RCA]
[GO:0019288 "isopentenyl diphosphate biosynthetic process,
mevalonate-independent pathway" evidence=RCA] [GO:0044242 "cellular
lipid catabolic process" evidence=RCA] GO:GO:0005886 GO:GO:0009506
GO:GO:0005794 GO:GO:0005774 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006950 GO:GO:0046872 EMBL:AL163818 eggNOG:COG3670
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055 GO:GO:0016121
EMBL:AJ005813 EMBL:BT000436 EMBL:BT002102 IPI:IPI00517969
PIR:T49193 PIR:T51734 RefSeq:NP_191911.1 UniGene:At.22615
UniGene:At.43820 ProteinModelPortal:O65572 SMR:O65572 STRING:O65572
PaxDb:O65572 PRIDE:O65572 EnsemblPlants:AT3G63520.1 GeneID:825527
KEGG:ath:AT3G63520 TAIR:At3g63520 HOGENOM:HOG000254836
InParanoid:O65572 KO:K11159 OMA:GVMMHDF PhylomeDB:O65572
ProtClustDB:PLN02491 Genevestigator:O65572 GO:GO:0045549
GO:GO:0016124 Uniprot:O65572
Length = 538
Score = 118 (46.6 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 52/195 (26%), Positives = 86/195 (44%)
Query: 9 PVQGT-VEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQCKF 67
PV+ V G +P ++G +R GP + H FD G++H +I G TY ++
Sbjct: 61 PVKDLPVHGFLPECLNGEFVRVGPNPKFDAVAGY-HWFDGDGMIHGVRIKDGKATYVSRY 119
Query: 68 IKSESYIKNH---AARRIVVTG-----FGTRFVP-DPCASIFQRIATLFKPGSDNTLVSV 118
+K+ S +K A + + G FG V + + + + G+ NT + V
Sbjct: 120 VKT-SRLKQEEFFGAAKFMKIGDLKGFFGLLMVNVQQLRTKLKILDNTYGNGTANTAL-V 177
Query: 119 YPIQDQVYAL--GDSNYMHRI-DPATLDTLGKIDLAGDVTILHQ-TSHP-LTTSDGETFN 173
Y ++ AL D Y+ ++ + L TLG ID D + H T+HP + GE F
Sbjct: 178 YH-HGKLLALQEADKPYVIKVLEDGDLQTLGIIDY--DKRLTHSFTAHPKVDPVTGEMFT 234
Query: 174 LGVTLRPTGPRYCIL 188
G + P Y ++
Sbjct: 235 FGYSHTPPYLTYRVI 249
Score = 85 (35.0 bits), Expect = 3.9e-08, Sum P(2) = 3.9e-08
Identities = 50/228 (21%), Positives = 93/228 (40%)
Query: 232 VVHRFQADSFFYLHIINAYEDTNDGIVVDICCYRNPA--MLDCMYREALKNIHSTPRYAQ 289
++ F+ + F H NA+E+ D +V+ C NP M+ +E L+N + +
Sbjct: 323 MIRWFELPNCFIFHNANAWEE-EDEVVLITCRLENPDLDMVSGKVKEKLENFGN-----E 376
Query: 290 MFRARPLRFRLDLASPRTAPTGKVRPSVICDVGCETPRMNGQHQGRSYTYFYAISADIDR 349
++ +RF + S A K+ S + + PR+N + G+ Y Y D
Sbjct: 377 LYE---MRFNMKTGS---ASQKKLSASAV-----DFPRINECYTGKKQRYVYGTILDSIA 425
Query: 350 DNPGTL-IKVNVQNNTCKSWSQ-----KDVYP-------SEPVFVATPNARKEDEGVLLS 396
G + ++ + T K + K +Y SE ++V A +ED+G L+
Sbjct: 426 KVTGIIKFDLHAEAETGKRMLEVGGNIKGIYDLGEGRYGSEAIYVPRETA-EEDDGYLI- 483
Query: 397 VLLWSHHPTRVSLLVLNARTMQELGRVNFTTPTPVPKCLHGWYFPHER 444
+ + + + V++A+TM P VP H + E+
Sbjct: 484 FFVHDENTGKSCVTVIDAKTMSAEPVAVVELPHRVPYGFHALFVTEEQ 531
>TAIR|locus:2091652 [details] [associations]
symbol:NCED3 "nine-cis-epoxycarotenoid dioxygenase 3"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM] [GO:0009414 "response to water deprivation"
evidence=RCA;IMP] [GO:0045549 "9-cis-epoxycarotenoid dioxygenase
activity" evidence=ISS;IDA] [GO:0009535 "chloroplast thylakoid
membrane" evidence=IDA] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0009688 "abscisic acid biosynthetic process"
evidence=ISS] [GO:0042538 "hyperosmotic salinity response"
evidence=RCA;IMP] [GO:0006970 "response to osmotic stress"
evidence=IMP] [GO:0009409 "response to cold" evidence=RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=RCA]
GO:GO:0009570 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0009414 GO:GO:0009688 GO:GO:0009535 GO:GO:0042538
eggNOG:COG3670 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
HOGENOM:HOG000254836 GO:GO:0045549 KO:K09840 OMA:HTLNAYD
EMBL:AB028617 ProtClustDB:PLN02258 EMBL:AB026549 EMBL:AY056255
IPI:IPI00528622 RefSeq:NP_188062.1 UniGene:At.26346
ProteinModelPortal:Q9LRR7 SMR:Q9LRR7 STRING:Q9LRR7 PaxDb:Q9LRR7
EnsemblPlants:AT3G14440.1 GeneID:820667 KEGG:ath:AT3G14440
TAIR:At3g14440 InParanoid:Q9LRR7 PhylomeDB:Q9LRR7
BioCyc:ARA:AT3G14440-MONOMER BioCyc:MetaCyc:AT3G14440-MONOMER
Genevestigator:Q9LRR7 Uniprot:Q9LRR7
Length = 599
Score = 114 (45.2 bits), Expect = 7.5e-07, Sum P(2) = 7.5e-07
Identities = 45/182 (24%), Positives = 76/182 (41%)
Query: 7 DQPVQGT--VEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQ 64
+QPV+ V G +P I GV +RNG + H FD G++H K G +Y
Sbjct: 132 EQPVRRNLPVVGKLPDSIKGVYVRNGANPLHEPVTGH-HFFDGDGMVHAVKFEHGSASYA 190
Query: 65 CKFIKSESYIKNHA-ARRIVVTGFGTRFVPDPCASI---FQRIAT-LFKPGSDNTLVS-- 117
C+F ++ +++ R + G A + + R A + P + +
Sbjct: 191 CRFTQTNRFVQERQLGRPVFPKAIGELHGHTGIARLMLFYARAAAGIVDPAHGTGVANAG 250
Query: 118 -VYPIQDQVYALGDSN--YMHRIDP-ATLDTLGKIDLAGDVTILHQTSHP-LTTSDGETF 172
VY ++ A+ + + Y +I P L T+G+ D G + +HP + GE F
Sbjct: 251 LVY-FNGRLLAMSEDDLPYQVQITPNGDLKTVGRFDFDGQLEST-MIAHPKVDPESGELF 308
Query: 173 NL 174
L
Sbjct: 309 AL 310
Score = 78 (32.5 bits), Expect = 7.5e-07, Sum P(2) = 7.5e-07
Identities = 52/216 (24%), Positives = 87/216 (40%)
Query: 222 FHVLDK--TNGSVVHRFQADSFFYLHIINAYEDTN-DGIVVDICCYRNPAMLDCMYREAL 278
F +LDK + S + A F H+ NA+E+ D +VV C P D ++ E+
Sbjct: 386 FGILDKYAEDSSNIKWIDAPDCFCFHLWNAWEEPETDEVVVIGSCMTPP---DSIFNESD 442
Query: 279 KNIHSTPRYAQMFRARPLRFRLDLASPRTAPTGKVRPSVICD---VGCETPRMNGQHQGR 335
+N+ S RL+L +T + + RP + + V E +N GR
Sbjct: 443 ENLKSVLS----------EIRLNL---KTGESTR-RPIISNEDQQVNLEAGMVNRNMLGR 488
Query: 336 SYTYFYAISADIDRDNPGTLIKVNVQNNTCKSWSQKDV-YPSEPVFVATPNARKEDEGVL 394
+ Y A+ G KV++ K D Y EP+F+ +EDEG +
Sbjct: 489 KTKFAYLALAEPWPKVSG-FAKVDLTTGEVKKHLYGDNRYGGEPLFLPGEGG-EEDEGYI 546
Query: 395 LSVLLWSHHPTRVSLLVLNARTMQELGRVNFTTPTP 430
L + + L ++NA +++ V + P
Sbjct: 547 LC-FVHDEKTWKSELQIVNAVSLEVEATVKLPSRVP 581
>TAIR|locus:2032085 [details] [associations]
symbol:NCED9 "nine-cis-epoxycarotenoid dioxygenase 9"
species:3702 "Arabidopsis thaliana" [GO:0009507 "chloroplast"
evidence=ISM] [GO:0045549 "9-cis-epoxycarotenoid dioxygenase
activity" evidence=IDA;TAS] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0009688 "abscisic acid biosynthetic process"
evidence=RCA;TAS] [GO:0010162 "seed dormancy process"
evidence=IGI;RCA] [GO:0016114 "terpenoid biosynthetic process"
evidence=RCA] EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC013430
GO:GO:0009570 GO:GO:0046872 GO:GO:0009688 eggNOG:COG3670
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055 GO:GO:0010162
HOGENOM:HOG000254836 GO:GO:0045549 KO:K09840 ProtClustDB:PLN02258
IPI:IPI00528094 PIR:E96812 RefSeq:NP_177960.1 UniGene:At.34302
ProteinModelPortal:Q9M9F5 SMR:Q9M9F5 STRING:Q9M9F5 PaxDb:Q9M9F5
PRIDE:Q9M9F5 EnsemblPlants:AT1G78390.1 GeneID:844175
KEGG:ath:AT1G78390 TAIR:At1g78390 InParanoid:Q9M9F5 OMA:WMAVAER
PhylomeDB:Q9M9F5 BioCyc:MetaCyc:AT1G78390-MONOMER
Genevestigator:Q9M9F5 Uniprot:Q9M9F5
Length = 657
Score = 110 (43.8 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 23/70 (32%), Positives = 36/70 (51%)
Query: 14 VEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQCKFIKSESY 73
V G +P I GV +RNG + S HLFD G++H + +G V+Y C+F ++
Sbjct: 201 VTGTVPECIQGVYVRNGANPLHK-PVSGHHLFDGDGMVHAVRFDNGSVSYACRFTETNRL 259
Query: 74 IKNHAARRIV 83
++ R V
Sbjct: 260 VQERECGRPV 269
Score = 81 (33.6 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 32/131 (24%), Positives = 53/131 (40%)
Query: 314 RPSVICDVGCETPRMNGQHQGRSYTYFYAISADIDRDNPGTLIKVNVQNNTCKSWSQKD- 372
RP + V E +N GR Y Y + G KV++ + + +
Sbjct: 524 RPVISEQVNLEAGMVNRNLLGRKTRYAYLALTEPWPKVSG-FAKVDLSTGEIRKYIYGEG 582
Query: 373 VYPSEPVFVATPNARKEDEGVLLSVLLWSHHPTRVSLLVLNARTMQELGRVNFTTPTPVP 432
Y EP+F+ P+ E++G + V + + L ++NA M+ V T P+ VP
Sbjct: 583 KYGGEPLFL--PSGDGEEDGGYIMVFVHDEEKVKSELQLINAVNMKLEATV--TLPSRVP 638
Query: 433 KCLHGWYFPHE 443
HG + E
Sbjct: 639 YGFHGTFISKE 649
>UNIPROTKB|O06785 [details] [associations]
symbol:MT0683 "Carotenoid cleavage oxygenase" species:1773
"Mycobacterium tuberculosis" [GO:0010436 "carotenoid dioxygenase
activity" evidence=IDA] [GO:0016118 "carotenoid catabolic process"
evidence=IDA] EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0046872 EMBL:BX842574
InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055 GO:GO:0010436
PIR:A70534 RefSeq:NP_215168.1 RefSeq:NP_335094.1
RefSeq:YP_006513995.1 ProteinModelPortal:O06785 SMR:O06785
PRIDE:O06785 EnsemblBacteria:EBMYCT00000002162
EnsemblBacteria:EBMYCT00000072242 GeneID:13318540 GeneID:888089
GeneID:925966 KEGG:mtc:MT0683 KEGG:mtu:Rv0654 KEGG:mtv:RVBD_0654
PATRIC:18123223 TubercuList:Rv0654 HOGENOM:HOG000254835 OMA:HTLNAYD
ProtClustDB:CLSK790657 GO:GO:0016118 Uniprot:O06785
Length = 501
Score = 116 (45.9 bits), Expect = 9.7e-06, Sum P(3) = 9.7e-06
Identities = 59/231 (25%), Positives = 96/231 (41%)
Query: 224 VLDKTNGSV-VHRFQADSFFYLHIINAYEDTNDG---IVVDICCYRNPAMLDCMYREALK 279
V+ + G+ V F + + H +NAY + +G +V+D+ Y M D R+
Sbjct: 292 VMPREGGNEDVRWFDIEPCYVYHPLNAYSECRNGAEVLVLDVVRYSR--MFD---RD--- 343
Query: 280 NIHSTPRYAQMFRARPL--RFRLDLASPRTAPTGKVRPSVICDVGCETPRMNGQHQGRSY 337
R +RP R+ ++LA TG V D E PR+N G +
Sbjct: 344 ------RRGPGGDSRPSLDRWTINLA------TGAVTAECRDDRAQEFPRINETLVGGPH 391
Query: 338 TYFYAISADID-RDNPGTLIKVNVQNNTCKSWSQK------DVYPSEPVFVATPNARKED 390
+ Y + + G + + C + S D+ E VFV P+AR ED
Sbjct: 392 RFAYTVGIEGGFLVGAGAALSTPLYKQDCVTGSSTVASLDPDLLIGEMVFVPNPSARAED 451
Query: 391 EGVLLSVLLWSHHPTRVSLLVLNARTMQELGRVNFTTPTPVPKCLHGWYFP 441
+G+L+ W LL+L+A+T++ + V+ P VP HG + P
Sbjct: 452 DGILMGYG-WHRGRDEGQLLLLDAQTLESIATVHL--PQRVPMGFHGNWAP 499
Score = 61 (26.5 bits), Expect = 9.7e-06, Sum P(3) = 9.7e-06
Identities = 15/58 (25%), Positives = 28/58 (48%)
Query: 14 VEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVT-YQCKFIKS 70
V G IP +DG +RNGP + + H F ++H + G Y+ +++++
Sbjct: 32 VTGRIPEHLDGRYLRNGPNPVAEVDPATYHWFTGDAMVHGVALRDGKARWYRNRWVRT 89
Score = 40 (19.1 bits), Expect = 9.7e-06, Sum P(3) = 9.7e-06
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 79 ARRIVVTGFGTRFVPDPCASIFQRI 103
AR ++ + G +PDP A++ R+
Sbjct: 247 ARLVIQSVLGRVRIPDPIAALGNRM 271
>ASPGD|ASPL0000046682 [details] [associations]
symbol:AN1643 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] EMBL:BN001307 GO:GO:0016702 EMBL:AACD01000026
eggNOG:COG3670 InterPro:IPR004294 PANTHER:PTHR10543 Pfam:PF03055
OMA:HGAWVPR HOGENOM:HOG000254835 OrthoDB:EOG4GTPN5
RefSeq:XP_659247.1 ProteinModelPortal:Q5BCT7
EnsemblFungi:CADANIAT00008281 GeneID:2875358 KEGG:ani:AN1643.2
Uniprot:Q5BCT7
Length = 480
Score = 104 (41.7 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 33/136 (24%), Positives = 62/136 (45%)
Query: 66 KFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFKPGSDNTLVSVYPIQDQV 125
+++++E +++ A+R ++ G G ++ + F L + NT V + Q+
Sbjct: 62 RYVQTEKFVREREAQRALLAGLG-KY-----RNRFTDAVELKVRSTANTNVVFF--NGQL 113
Query: 126 YALGDSNYMHRIDPATLDTLGKIDLAGDVTILHQTSHP-LTTSDGETFNLGVTLRPTG-P 183
AL + + + +DP TLDT G D G + L T+HP + GE G R G P
Sbjct: 114 LALKEDSPPYALDPVTLDTKGLYDFEGQLPSLTFTAHPKFDPATGEMVCFGYEARGDGTP 173
Query: 184 RYCILQLNDAFSYPDL 199
C ++ + ++
Sbjct: 174 DVCYYSVSPTGKFTEV 189
Score = 73 (30.8 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 50/212 (23%), Positives = 89/212 (41%)
Query: 245 HIINAYEDTNDGIVVDICCYRNPAMLDCMYREALKNIHSTPRYAQMFRARPLRFRLDLAS 304
H NAYE+ +V+D+ + +A N P + + ++ +RF +D
Sbjct: 266 HTANAYENEQGHLVIDLGLSEKNVFF--WWPDAQGN---APEPSSIV-SQLVRFTID--- 316
Query: 305 PRTAPTGKVRPSVICDVGCETPRMNGQHQGRSYTYFYAISAD----IDRDNPGTLIKVN- 359
P+T P V+ + E R++ + R Y + Y D D + GT I
Sbjct: 317 PQTEDLTLREPEVLQEGNSEFYRIDDRFATRPYRHCYFDLMDPQLGTDFERIGTKIGGGF 376
Query: 360 -VQNNTCK---SWSQKDVY-PS------EPVFVATPNARKEDEGVLLSVLLWSHHPTRVS 408
+ N+ + Q +VY P EPVF+ N+ E +G +L+++ +++ T S
Sbjct: 377 PLYNSLAHLDHTTGQVEVYFPGRTHLVQEPVFIPRKNSSTEGDGHVLALV--NNYDTMAS 434
Query: 409 LL-VLNARTMQELGRVNFTTPTPVPKCLHG-W 438
L +L+ R + P + + LHG W
Sbjct: 435 ELHLLDTRDFAR-AQAKILLPVRLRQGLHGSW 465
Score = 38 (18.4 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 10/18 (55%), Positives = 10/18 (55%)
Query: 14 VEGVIPSWIDGVLIRNGP 31
V G IP IDGV R P
Sbjct: 32 VYGEIPKDIDGVFYRVMP 49
>UNIPROTKB|Q2KEQ1 [details] [associations]
symbol:MGCH7_ch7g985 "Putative uncharacterized protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:CM000230 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 Uniprot:Q2KEQ1
Length = 489
Score = 96 (38.9 bits), Expect = 4.4e-05, Sum P(3) = 4.4e-05
Identities = 30/94 (31%), Positives = 43/94 (45%)
Query: 236 FQADSFFYLHIINAYEDTNDGIVVDICCYRNPAMLDCMYREALKNIHSTPRYAQMFRARP 295
F+A + F H +NAYED + IV D+ + +A N A AR
Sbjct: 273 FKAPNSFPGHTVNAYEDESGNIVFDLPLTNTNVFF--WWPDAQGNSPDPKEIA----ARL 326
Query: 296 LRFRLDLASPRTAPTGKVRPSVICDVGCETPRMN 329
+RF D PR+A P V+C + CE PR++
Sbjct: 327 VRFTFD---PRSAERDLPEPEVLCRLDCEFPRVD 357
Score = 60 (26.2 bits), Expect = 4.4e-05, Sum P(3) = 4.4e-05
Identities = 25/86 (29%), Positives = 38/86 (44%)
Query: 104 ATLFKPGSD-NTLVSVYPIQDQVYALGDSNYMHRIDPATLDTLGKIDLAGDVTILHQTSH 162
A FK S NT + +Y ++ A + + + +DP TL+T+ G + L T+H
Sbjct: 102 AVEFKVRSTANTNI-IY-FNGRLLACKEDSPPYCLDPETLETMWLETFDGQLPSLTFTAH 159
Query: 163 P-LTTSDGETFNLGVTLRPTG-PRYC 186
P + GE G R G P C
Sbjct: 160 PKVDAHTGELICFGYEARGDGTPDVC 185
Score = 56 (24.8 bits), Expect = 4.4e-05, Sum P(3) = 4.4e-05
Identities = 14/64 (21%), Positives = 30/64 (46%)
Query: 14 VEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQCKFIKSESY 73
V+G IP ID R P + F+ G + F+I G ++ +++++E +
Sbjct: 38 VQGSIPPEIDDTFYRVMP------DPHLPQWFNGDGNISAFRIKDGRCDFKQRYVQTEKF 91
Query: 74 IKNH 77
++ +
Sbjct: 92 VRKY 95
>UNIPROTKB|Q7XU29 [details] [associations]
symbol:OSJNBb0034G17.9 "OSJNBb0034G17.9 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0009733 "response
to auxin stimulus" evidence=IMP] [GO:0010223 "secondary shoot
formation" evidence=IMP] [GO:0016121 "carotene catabolic process"
evidence=ISS] [GO:0045549 "9-cis-epoxycarotenoid dioxygenase
activity" evidence=ISS] GO:GO:0009570 GO:GO:0009733 GO:GO:0009926
EMBL:AP008210 EMBL:CM000141 eggNOG:COG3670 InterPro:IPR004294
PANTHER:PTHR10543 Pfam:PF03055 GO:GO:0016121 GO:GO:0010223
GO:GO:0045549 GO:GO:0016124 EMBL:AL663000 RefSeq:NP_001053491.1
UniGene:Os.26493 UniGene:Os.56287 UniGene:Os.7470
EnsemblPlants:LOC_Os04g46470.1 GeneID:4336591 KEGG:osa:4336591
HOGENOM:HOG000240947 OMA:VMKNVAN ProtClustDB:PLN02969
Uniprot:Q7XU29
Length = 609
Score = 91 (37.1 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 40/150 (26%), Positives = 63/150 (42%)
Query: 9 PVQGTVEGVIP-SWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSG--LVTYQC 65
P++ T EG IP + G GPG ++ S H D G L F+ G + Y
Sbjct: 72 PLRVT-EGAIPPDFPAGTYYLAGPGIFSDDHGSTVHPLDGHGYLRSFRFRPGDRTIHYSA 130
Query: 66 KFIKSESYIKNHAARRIVVTGFGTRFVPDPCASIFQ---RIATLFKPGSDNTLVSVYPIQ 122
+F+ E+ K +R G RF S+ Q ++ + K + SV
Sbjct: 131 RFV--ETAAKREESR----DGASWRFTHRGPFSVLQGGKKVGNV-KVMKNVANTSVLRWG 183
Query: 123 DQVYALGDSNYMHRIDPATLDTLGKIDLAG 152
++ L + + +DP TL+T+G DL G
Sbjct: 184 GRLLCLWEGGQPYEVDPRTLETVGPFDLLG 213
Score = 77 (32.2 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 37/118 (31%), Positives = 55/118 (46%)
Query: 326 PRMNGQHQGRSYTYFYAISADIDRDN-P----GTLIKVNVQNNTCKSWSQKD-VYPSEPV 379
P +N + + + YA +A R P +++KV+V + + + WS + EPV
Sbjct: 486 PAINPSYANQRNRFVYAGAASGSRRFLPYFPFDSVVKVDVSDGSARWWSTDGRKFVGEPV 545
Query: 380 FVATPNARKEDEG-VLLSVLLWSHHPTRVSLLVLNARTMQELGRVN-FTTPTPVPKCL 435
FV P ED G VLL S H R L+VL+A+ ++G N VPK L
Sbjct: 546 FV--PTGGGEDGGYVLLVEYAVSKH--RCHLVVLDAK---KIGTENALVAKLEVPKNL 596
>UNIPROTKB|Q53353 [details] [associations]
symbol:Q53353 "Lignostilbene-alpha,beta-dioxygenase isozyme
I" species:13689 "Sphingomonas paucimobilis" [GO:0005506 "iron ion
binding" evidence=IDA] [GO:0046274 "lignin catabolic process"
evidence=IDA] [GO:0050054 "lignostilbene alpha beta-dioxygenase
activity" evidence=IDA] [GO:0055114 "oxidation-reduction process"
evidence=IDA] GO:GO:0005506 InterPro:IPR004294 PANTHER:PTHR10543
Pfam:PF03055 GO:GO:0046274 EMBL:S65040 PIR:JN0595
ProteinModelPortal:Q53353 GO:GO:0050054 Uniprot:Q53353
Length = 485
Score = 89 (36.4 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 32/150 (21%), Positives = 66/150 (44%)
Query: 14 VEGVIPSWIDGVLIRNGPGSWNVGEESFDHLFDCSGLLHRFKISSGLVTYQCKFIKSESY 73
+EG +P ++G R P + D F+ G++ F+ G + ++ ++ +++ +
Sbjct: 28 IEGEVPPQLNGTFHRVHPDAQFPPRFEDDQFFNGDGMVSLFRFHDGKIDFRQRYAQTDKW 87
Query: 74 IKNHAARRIVVTGFGTRFVPDPCASIFQRIATLFKPGSDNTLVSVYPIQDQVYALGDSNY 133
A + + + D AS+ I G+ NT V V+ ++YA+ + +
Sbjct: 88 KVERKAGKSLFGAYRNPLTDD--ASVQGMIR-----GTANTNVMVHA--GKLYAMKEDSP 138
Query: 134 MHRIDPATLDTLGKIDLAGDVTILHQTSHP 163
+DP TL+T G + G + +HP
Sbjct: 139 CLIMDPLTLETEGYTNFDGKLQSQTFCAHP 168
Score = 72 (30.4 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 45/216 (20%), Positives = 92/216 (42%)
Query: 236 FQADSFFYLHIINAYEDTNDGIVVDICCYRNPAMLDCMYREALKNIHSTPRYAQMFRARP 295
F+ + F H++NA+ D + +D+ RN + ++H P +
Sbjct: 273 FKTGNCFVGHVMNAFNDGTK-VHIDMPVSRNNSF-------PFFDVHGAPFDPVAGQGFL 324
Query: 296 LRFRLDLASPRTAPTGKVRPSVICDVGCETPRMNGQHQGRSYTYFYAISADIDR--DNPG 353
R+ +D+AS + R + D E PR++ ++ R+Y + + + D ++ + PG
Sbjct: 325 TRWTVDMASNGDSFEKTER---LFDRPDEFPRIDERYATRAYRHGWMLILDTEKPYEAPG 381
Query: 354 --------TLIKVNVQNNTCKSW-SQKDVYPSEPVFVA-TPNARKEDEGVLLSVLLWSHH 403
TL +++ SW + EP F+ +P+A E +G +++ L+ H
Sbjct: 382 GAFYALTNTLGHIDLATGKSSSWWAGPRCAIQEPCFIPRSPDA-PEGDGYVIA-LVDDHV 439
Query: 404 PTRVSLLVLNARTMQELGRVNFTTPTPVPKCLHG-W 438
L + +A+ + + P + + LHG W
Sbjct: 440 ANYSDLAIFDAQHVDQGPIARAKLPVRIRQGLHGNW 475
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.138 0.431 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 447 441 0.00089 118 3 11 22 0.37 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 56
No. of states in DFA: 619 (66 KB)
Total size of DFA: 304 KB (2157 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 33.71u 0.09s 33.80t Elapsed: 00:00:10
Total cpu time: 33.73u 0.09s 33.82t Elapsed: 00:00:10
Start: Thu Aug 15 12:02:46 2013 End: Thu Aug 15 12:02:56 2013