RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy1464
         (107 letters)



>d1cjaa_ d.144.1.3 (A:) Actin-fragmin kinase, catalytic domain
           {Physarum polycephalum [TaxId: 5791]}
          Length = 342

 Score = 28.3 bits (63), Expect = 0.17
 Identities = 11/33 (33%), Positives = 17/33 (51%)

Query: 36  RKQDAPRVFSLVSQSAVGHTVALDFLYNNWDRI 68
               AP V +  +   +G  +ALD + NN DR+
Sbjct: 173 TTTSAPEVLTKSTMQQLGSLMALDVIVNNSDRL 205


>d1li4a2 c.23.12.3 (A:3-189,A:353-432) S-adenosylhomocystein
           hydrolase {Human (Homo sapiens) [TaxId: 9606]}
          Length = 267

 Score = 23.6 bits (51), Expect = 7.0
 Identities = 5/27 (18%), Positives = 11/27 (40%)

Query: 44  FSLVSQSAVGHTVALDFLYNNWDRIKK 70
             ++S S     +A   L+ + D+   
Sbjct: 190 SFVMSNSFTNQVMAQIELWTHPDKYPV 216


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.329    0.138    0.406 

Gapped
Lambda     K      H
   0.267   0.0671    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 370,311
Number of extensions: 13778
Number of successful extensions: 37
Number of sequences better than 10.0: 1
Number of HSP's gapped: 37
Number of HSP's successfully gapped: 5
Length of query: 107
Length of database: 2,407,596
Length adjustment: 67
Effective length of query: 40
Effective length of database: 1,487,686
Effective search space: 59507440
Effective search space used: 59507440
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 47 (22.0 bits)