Query psy14643
Match_columns 801
No_of_seqs 450 out of 3233
Neff 8.7
Searched_HMMs 29240
Date Fri Aug 16 16:56:55 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14643.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14643hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3fim_B ARYL-alcohol oxidase; A 100.0 2.2E-89 7.4E-94 788.2 39.2 499 257-790 3-565 (566)
2 3qvp_A Glucose oxidase; oxidor 100.0 6.9E-84 2.4E-88 743.0 40.9 502 255-792 18-580 (583)
3 3q9t_A Choline dehydrogenase a 100.0 1.1E-82 3.8E-87 734.0 38.4 495 256-792 6-574 (577)
4 1gpe_A Protein (glucose oxidas 100.0 1.6E-80 5.5E-85 722.2 26.9 503 257-793 25-585 (587)
5 2jbv_A Choline oxidase; alcoho 100.0 4.2E-77 1.4E-81 688.9 42.0 480 257-793 14-532 (546)
6 3t37_A Probable dehydrogenase; 100.0 2.5E-76 8.7E-81 684.2 42.4 472 257-790 18-523 (526)
7 1ju2_A HydroxynitrIle lyase; f 100.0 4.7E-67 1.6E-71 603.6 23.2 446 257-791 27-517 (536)
8 1kdg_A CDH, cellobiose dehydro 100.0 4.1E-63 1.4E-67 574.8 26.3 432 304-792 85-544 (546)
9 1n4w_A CHOD, cholesterol oxida 100.0 2E-60 7E-65 545.4 24.1 386 300-792 95-501 (504)
10 1coy_A Cholesterol oxidase; ox 100.0 2.3E-59 8E-64 536.7 22.6 383 300-792 100-506 (507)
11 3pl8_A Pyranose 2-oxidase; sub 100.0 1.2E-42 4.1E-47 405.8 26.4 420 308-801 157-623 (623)
12 3fim_B ARYL-alcohol oxidase; A 100.0 9.5E-42 3.2E-46 392.2 19.9 235 3-263 317-565 (566)
13 3q9t_A Choline dehydrogenase a 100.0 1.2E-40 4.1E-45 384.0 19.1 237 4-265 312-574 (577)
14 3qvp_A Glucose oxidase; oxidor 100.0 1.5E-36 5.3E-41 349.3 6.9 160 102-265 420-580 (583)
15 2jbv_A Choline oxidase; alcoho 100.0 1.8E-34 6.1E-39 332.9 14.9 201 43-267 331-533 (546)
16 3t37_A Probable dehydrogenase; 100.0 3.8E-33 1.3E-37 322.4 15.4 152 99-259 368-519 (526)
17 1gpe_A Protein (glucose oxidas 100.0 7.3E-34 2.5E-38 330.1 6.9 161 101-265 423-584 (587)
18 1kdg_A CDH, cellobiose dehydro 100.0 5.5E-32 1.9E-36 313.5 12.5 206 24-264 337-543 (546)
19 1ju2_A HydroxynitrIle lyase; f 100.0 7.8E-32 2.7E-36 310.2 12.2 157 102-265 355-519 (536)
20 1n4w_A CHOD, cholesterol oxida 99.9 1.3E-25 4.4E-30 256.9 4.0 135 101-265 366-501 (504)
21 1coy_A Cholesterol oxidase; ox 99.9 8.1E-25 2.8E-29 250.4 3.6 134 101-264 371-505 (507)
22 3pl8_A Pyranose 2-oxidase; sub 99.8 1.3E-21 4.5E-26 228.3 6.8 138 108-267 475-616 (623)
23 4at0_A 3-ketosteroid-delta4-5a 98.0 3.9E-05 1.3E-09 87.4 13.1 65 431-496 207-272 (510)
24 1qo8_A Flavocytochrome C3 fuma 96.6 0.0087 3E-07 68.7 12.4 63 431-495 255-318 (566)
25 1y0p_A Fumarate reductase flav 96.4 0.0091 3.1E-07 68.7 10.1 62 431-494 260-323 (571)
26 4dgk_A Phytoene dehydrogenase; 95.5 0.096 3.3E-06 58.8 13.5 56 436-497 231-286 (501)
27 1d4d_A Flavocytochrome C fumar 92.6 0.17 5.7E-06 58.0 7.5 64 431-496 260-325 (572)
28 2gag_B Heterotetrameric sarcos 92.2 0.2 7E-06 54.2 7.3 57 435-499 183-239 (405)
29 2h88_A Succinate dehydrogenase 91.2 0.38 1.3E-05 55.5 8.3 53 435-490 164-218 (621)
30 3da1_A Glycerol-3-phosphate de 90.2 0.41 1.4E-05 54.6 7.4 61 436-500 180-242 (561)
31 1kf6_A Fumarate reductase flav 89.6 0.46 1.6E-05 54.6 7.2 58 431-491 140-199 (602)
32 2wdq_A Succinate dehydrogenase 89.0 0.39 1.3E-05 55.1 6.0 52 437-490 154-207 (588)
33 1chu_A Protein (L-aspartate ox 88.9 0.46 1.6E-05 53.9 6.4 53 437-490 150-209 (540)
34 2rgh_A Alpha-glycerophosphate 88.4 0.54 1.8E-05 53.7 6.6 59 437-499 199-259 (571)
35 3dme_A Conserved exported prot 87.2 0.37 1.3E-05 51.1 4.0 60 435-499 159-219 (369)
36 2bs2_A Quinol-fumarate reducta 87.0 0.71 2.4E-05 53.6 6.5 51 437-490 169-221 (660)
37 1rp0_A ARA6, thiazole biosynth 85.3 1.4 4.9E-05 45.1 7.2 51 435-488 129-190 (284)
38 3dje_A Fructosyl amine: oxygen 84.7 0.52 1.8E-05 51.7 3.7 53 435-494 170-225 (438)
39 3cgv_A Geranylgeranyl reductas 84.1 1.3 4.4E-05 47.5 6.5 65 430-499 106-170 (397)
40 3e1t_A Halogenase; flavoprotei 82.8 1.5 5E-05 49.3 6.4 58 429-489 114-172 (512)
41 3ka7_A Oxidoreductase; structu 82.0 0.7 2.4E-05 50.3 3.3 53 436-495 206-258 (425)
42 3gyx_A Adenylylsulfate reducta 81.2 0.87 3E-05 52.8 3.9 50 440-490 182-234 (662)
43 2i0z_A NAD(FAD)-utilizing dehy 80.9 1.5 5.1E-05 48.2 5.5 52 435-492 143-194 (447)
44 1jnr_A Adenylylsulfate reducta 80.6 1.6 5.3E-05 50.6 5.7 50 440-490 166-219 (643)
45 3atr_A Conserved archaeal prot 80.5 2 6.8E-05 47.3 6.4 56 431-489 105-162 (453)
46 1y56_B Sarcosine oxidase; dehy 80.3 0.98 3.3E-05 48.3 3.7 57 435-499 158-214 (382)
47 3axb_A Putative oxidoreductase 78.1 1.3 4.4E-05 48.6 3.9 59 435-499 190-263 (448)
48 3f8d_A Thioredoxin reductase ( 76.5 5.3 0.00018 41.0 7.9 65 431-499 195-261 (323)
49 3cty_A Thioredoxin reductase; 74.8 2.3 7.9E-05 44.0 4.6 59 438-499 202-262 (319)
50 3jsk_A Cypbp37 protein; octame 73.3 6.8 0.00023 41.2 7.6 61 429-490 164-252 (344)
51 2qcu_A Aerobic glycerol-3-phos 73.1 3 0.0001 46.5 5.2 54 437-495 160-215 (501)
52 3nyc_A D-arginine dehydrogenas 72.2 2.6 8.9E-05 44.7 4.3 55 436-499 164-218 (381)
53 2oln_A NIKD protein; flavoprot 72.0 4.1 0.00014 43.6 5.9 54 436-498 163-216 (397)
54 3lxd_A FAD-dependent pyridine 71.4 3.3 0.00011 44.9 4.9 64 431-500 199-262 (415)
55 3fg2_P Putative rubredoxin red 71.1 3.1 0.0001 45.0 4.5 64 431-500 189-252 (404)
56 3itj_A Thioredoxin reductase 1 71.0 3.8 0.00013 42.5 5.2 58 435-495 218-277 (338)
57 3i3l_A Alkylhalidase CMLS; fla 70.1 3.7 0.00013 46.9 5.1 56 429-487 131-186 (591)
58 1mo9_A ORF3; nucleotide bindin 69.3 5.9 0.0002 44.4 6.5 67 431-499 260-327 (523)
59 3ces_A MNMG, tRNA uridine 5-ca 68.9 3.1 0.00011 47.7 4.1 47 438-491 137-183 (651)
60 2zxi_A TRNA uridine 5-carboxym 68.6 2.1 7.1E-05 49.0 2.5 49 438-493 136-184 (637)
61 3ab1_A Ferredoxin--NADP reduct 67.5 8 0.00027 40.6 6.8 60 437-499 213-273 (360)
62 1fl2_A Alkyl hydroperoxide red 66.9 5.8 0.0002 40.6 5.4 56 437-495 191-248 (310)
63 3r9u_A Thioredoxin reductase; 66.4 3.7 0.00013 42.0 3.8 59 434-495 191-250 (315)
64 3oz2_A Digeranylgeranylglycero 66.1 7.9 0.00027 40.9 6.5 60 428-491 104-163 (397)
65 3nlc_A Uncharacterized protein 66.0 2.6 8.8E-05 47.6 2.6 48 436-489 230-277 (549)
66 2q0l_A TRXR, thioredoxin reduc 66.0 6.2 0.00021 40.4 5.4 59 436-497 189-249 (311)
67 1trb_A Thioredoxin reductase; 64.4 5.1 0.00017 41.2 4.4 56 436-494 194-252 (320)
68 2gmh_A Electron transfer flavo 64.1 4.4 0.00015 46.2 4.1 61 429-491 147-219 (584)
69 1ryi_A Glycine oxidase; flavop 63.9 6 0.00021 41.9 5.0 55 435-498 173-227 (382)
70 2gjc_A Thiazole biosynthetic e 63.3 11 0.00037 39.3 6.6 57 431-487 152-237 (326)
71 1pj5_A N,N-dimethylglycine oxi 63.2 4 0.00014 48.7 3.8 57 435-499 160-216 (830)
72 1vdc_A NTR, NADPH dependent th 62.5 9.5 0.00033 39.4 6.2 62 436-499 205-268 (333)
73 3v76_A Flavoprotein; structura 61.3 7.8 0.00027 42.0 5.3 54 431-492 137-190 (417)
74 2q7v_A Thioredoxin reductase; 60.2 8.7 0.0003 39.6 5.3 57 435-495 197-255 (325)
75 2gf3_A MSOX, monomeric sarcosi 59.6 9 0.00031 40.6 5.4 52 435-495 159-210 (389)
76 3ps9_A TRNA 5-methylaminomethy 58.0 4.4 0.00015 47.1 2.8 52 436-495 427-478 (676)
77 3nrn_A Uncharacterized protein 57.8 3.8 0.00013 44.3 2.1 50 436-494 199-248 (421)
78 3pvc_A TRNA 5-methylaminomethy 57.7 3.9 0.00013 47.7 2.2 53 436-495 422-474 (689)
79 3nix_A Flavoprotein/dehydrogen 55.9 10 0.00035 40.7 5.1 54 431-488 111-165 (421)
80 2cul_A Glucose-inhibited divis 54.6 10 0.00035 37.2 4.4 48 438-492 81-128 (232)
81 2e5v_A L-aspartate oxidase; ar 53.8 5.6 0.00019 44.0 2.6 47 437-489 130-176 (472)
82 1hyu_A AHPF, alkyl hydroperoxi 52.3 15 0.00052 40.9 5.9 54 438-494 403-458 (521)
83 3p1w_A Rabgdi protein; GDI RAB 52.2 7 0.00024 43.1 3.0 48 436-488 266-313 (475)
84 3s5w_A L-ornithine 5-monooxyge 51.5 15 0.0005 40.2 5.5 60 430-492 131-193 (463)
85 2uzz_A N-methyl-L-tryptophan o 50.8 13 0.00046 38.9 5.0 50 435-493 158-207 (372)
86 2gqf_A Hypothetical protein HI 50.7 13 0.00046 39.9 4.9 56 431-492 114-171 (401)
87 2ywl_A Thioredoxin reductase r 49.4 16 0.00054 33.9 4.7 57 431-499 61-118 (180)
88 3c4n_A Uncharacterized protein 48.6 6 0.00021 42.6 1.7 56 435-499 181-246 (405)
89 2zbw_A Thioredoxin reductase; 48.2 14 0.00047 38.2 4.4 64 432-499 197-262 (335)
90 3iwa_A FAD-dependent pyridine 48.1 15 0.0005 40.4 4.8 62 431-499 207-268 (472)
91 3lzw_A Ferredoxin--NADP reduct 45.3 18 0.00062 37.0 4.8 59 437-499 200-260 (332)
92 3cp8_A TRNA uridine 5-carboxym 43.5 30 0.001 39.6 6.5 47 437-490 129-175 (641)
93 3ihg_A RDME; flavoenzyme, anth 42.6 36 0.0012 37.9 7.1 56 431-488 125-182 (535)
94 2qa1_A PGAE, polyketide oxygen 41.2 39 0.0013 37.3 7.0 58 428-489 108-165 (500)
95 2bry_A NEDD9 interacting prote 40.8 5.2 0.00018 44.6 -0.4 61 431-492 171-233 (497)
96 2x3n_A Probable FAD-dependent 40.5 33 0.0011 36.3 6.1 47 437-489 119-166 (399)
97 2bcg_G Secretory pathway GDP d 40.4 14 0.00047 40.4 3.0 47 437-488 253-299 (453)
98 1q1r_A Putidaredoxin reductase 40.4 14 0.00049 40.0 3.2 63 434-500 199-261 (431)
99 3ef6_A Toluene 1,2-dioxygenase 39.4 11 0.00036 40.7 1.8 63 431-500 190-252 (410)
100 4a9w_A Monooxygenase; baeyer-v 39.1 7.6 0.00026 40.4 0.6 57 431-494 81-137 (357)
101 1k0i_A P-hydroxybenzoate hydro 38.4 28 0.00095 36.8 5.0 50 438-490 115-164 (394)
102 2eq6_A Pyruvate dehydrogenase 38.1 26 0.00089 38.3 4.8 62 434-499 218-283 (464)
103 1m6i_A Programmed cell death p 37.9 23 0.00078 39.2 4.4 59 434-499 234-292 (493)
104 2xve_A Flavin-containing monoo 37.8 17 0.00057 40.0 3.2 67 430-498 105-175 (464)
105 2qae_A Lipoamide, dihydrolipoy 36.4 30 0.001 37.8 5.0 65 431-499 220-288 (468)
106 2qa2_A CABE, polyketide oxygen 36.2 42 0.0014 37.1 6.2 57 428-489 109-166 (499)
107 1d5t_A Guanine nucleotide diss 35.9 21 0.00073 38.7 3.6 45 437-488 245-289 (433)
108 2dkh_A 3-hydroxybenzoate hydro 35.3 37 0.0013 38.9 5.7 56 436-492 152-214 (639)
109 2v3a_A Rubredoxin reductase; a 34.9 42 0.0014 35.5 5.7 62 431-499 192-253 (384)
110 3hyw_A Sulfide-quinone reducta 34.7 36 0.0012 36.8 5.2 55 742-796 275-337 (430)
111 1vg0_A RAB proteins geranylger 33.8 28 0.00095 39.9 4.2 49 435-487 387-435 (650)
112 1ebd_A E3BD, dihydrolipoamide 32.6 36 0.0012 37.0 4.8 55 435-493 220-274 (455)
113 3s5w_A L-ornithine 5-monooxyge 32.5 42 0.0014 36.4 5.3 50 437-490 327-378 (463)
114 2a8x_A Dihydrolipoyl dehydroge 32.4 27 0.00094 38.1 3.8 62 434-499 220-283 (464)
115 4b63_A L-ornithine N5 monooxyg 32.0 46 0.0016 36.8 5.6 59 428-487 147-212 (501)
116 3gwf_A Cyclohexanone monooxyge 31.8 23 0.00079 39.7 3.1 61 430-495 91-153 (540)
117 2weu_A Tryptophan 5-halogenase 31.6 31 0.001 38.2 4.1 51 431-487 178-228 (511)
118 1zmd_A Dihydrolipoyl dehydroge 30.7 33 0.0011 37.5 4.1 63 434-499 228-294 (474)
119 1v59_A Dihydrolipoamide dehydr 30.5 38 0.0013 37.0 4.6 67 431-499 229-299 (478)
120 3f8d_A Thioredoxin reductase ( 30.4 49 0.0017 33.4 5.2 51 742-795 269-320 (323)
121 1gte_A Dihydropyrimidine dehyd 29.7 94 0.0032 37.8 8.2 60 437-499 381-454 (1025)
122 2jae_A L-amino acid oxidase; o 29.2 89 0.003 34.0 7.4 42 441-486 252-293 (489)
123 2hqm_A GR, grase, glutathione 28.4 19 0.00066 39.6 1.7 62 434-499 234-296 (479)
124 4dna_A Probable glutathione re 28.4 24 0.00081 38.6 2.4 60 434-499 219-280 (463)
125 2a87_A TRXR, TR, thioredoxin r 27.1 44 0.0015 34.3 4.1 54 437-494 202-257 (335)
126 3fmw_A Oxygenase; mithramycin, 27.0 40 0.0014 38.0 4.0 56 430-489 152-207 (570)
127 2cdu_A NADPH oxidase; flavoenz 26.8 30 0.001 37.5 2.9 57 431-494 196-252 (452)
128 3d1c_A Flavin-containing putat 26.5 46 0.0016 34.6 4.2 53 431-491 93-145 (369)
129 3cgb_A Pyridine nucleotide-dis 26.4 40 0.0014 36.9 3.8 58 434-499 235-292 (480)
130 3lad_A Dihydrolipoamide dehydr 26.4 77 0.0026 34.5 6.2 54 435-492 230-283 (476)
131 2gv8_A Monooxygenase; FMO, FAD 26.3 52 0.0018 35.6 4.7 61 430-494 119-182 (447)
132 2e4g_A Tryptophan halogenase; 26.2 55 0.0019 36.6 5.0 51 431-487 199-250 (550)
133 1yvv_A Amine oxidase, flavin-c 26.2 31 0.0011 35.3 2.8 48 440-494 119-167 (336)
134 3lzw_A Ferredoxin--NADP reduct 26.2 1.1E+02 0.0039 30.7 7.1 51 742-795 267-318 (332)
135 2gag_A Heterotetrameric sarcos 25.9 70 0.0024 38.6 6.1 60 437-498 327-392 (965)
136 1dxl_A Dihydrolipoamide dehydr 25.9 28 0.00094 38.1 2.3 56 434-493 226-283 (470)
137 3ic9_A Dihydrolipoamide dehydr 25.8 54 0.0018 36.1 4.7 58 437-499 226-286 (492)
138 3dgz_A Thioredoxin reductase 2 25.6 59 0.002 35.6 5.0 57 434-493 233-291 (488)
139 3oc4_A Oxidoreductase, pyridin 25.5 52 0.0018 35.6 4.5 56 431-494 194-249 (452)
140 3uox_A Otemo; baeyer-villiger 25.0 35 0.0012 38.2 3.0 63 431-498 92-156 (545)
141 3urh_A Dihydrolipoyl dehydroge 24.1 72 0.0025 34.9 5.4 62 434-499 247-312 (491)
142 2gqw_A Ferredoxin reductase; f 24.0 40 0.0014 36.0 3.1 58 432-500 193-250 (408)
143 2aqj_A Tryptophan halogenase, 23.7 44 0.0015 37.2 3.5 53 430-488 169-221 (538)
144 2pyx_A Tryptophan halogenase; 23.6 51 0.0017 36.6 4.0 53 429-487 178-231 (526)
145 2vvm_A Monoamine oxidase N; FA 23.6 96 0.0033 33.8 6.3 43 437-487 267-310 (495)
146 1fec_A Trypanothione reductase 23.4 34 0.0012 37.7 2.5 60 434-499 239-300 (490)
147 4ap3_A Steroid monooxygenase; 22.9 28 0.00095 39.1 1.6 61 430-495 103-165 (549)
148 2wpf_A Trypanothione reductase 22.8 38 0.0013 37.4 2.7 60 434-499 243-304 (495)
149 3hyw_A Sulfide-quinone reducta 22.8 48 0.0017 35.7 3.5 60 431-499 205-265 (430)
150 3k7m_X 6-hydroxy-L-nicotine ox 22.8 55 0.0019 34.9 4.0 49 431-487 209-257 (431)
151 3dgh_A TRXR-1, thioredoxin red 22.8 45 0.0015 36.5 3.3 58 434-494 235-294 (483)
152 1y0p_A Fumarate reductase flav 22.2 50 0.0017 37.1 3.6 48 742-791 517-568 (571)
153 4g6h_A Rotenone-insensitive NA 21.9 41 0.0014 37.2 2.8 45 742-789 353-398 (502)
154 1w4x_A Phenylacetone monooxyge 21.8 45 0.0015 37.3 3.1 49 441-494 111-159 (542)
155 3nks_A Protoporphyrinogen oxid 21.5 28 0.00096 37.9 1.3 50 437-493 245-294 (477)
156 1cjc_A Protein (adrenodoxin re 21.0 1.1E+02 0.0036 33.4 5.8 53 438-491 269-335 (460)
157 1qo8_A Flavocytochrome C3 fuma 20.5 65 0.0022 36.1 4.1 49 742-792 512-564 (566)
No 1
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=100.00 E-value=2.2e-89 Score=788.18 Aligned_cols=499 Identities=28% Similarity=0.443 Sum_probs=421.6
Q ss_pred ccccc-cccccCccccccccccCC-CCC-----------------------------ccCCcccccCcCcccccCCCeEE
Q psy14643 257 ADMIK-DTWSQGENKLYANVTPDG-IRR-----------------------------RADSIQAEKQPGQCQAMVKQRCR 305 (801)
Q Consensus 257 a~~i~-~~~~~g~~v~A~rLse~g-~~~-----------------------------~~~~y~~~~~~~~~~~~~~~~~~ 305 (801)
.|+|+ ..++|| ||+|.||||++ .++ +.|.|.++||.+ ++++.+.
T Consensus 3 yD~IIVG~G~aG-~v~A~rLse~~~~~VlllEaG~~~~~~~~~~~p~~~~~~~~~~~~~w~~~t~pq~~----~~~r~~~ 77 (566)
T 3fim_B 3 FDYVVVGAGNAG-NVVAARLTEDPDVSVLVLEAGVSDENVLGAEAPLLAPGLVPNSIFDWNYTTTAQAG----YNGRSIA 77 (566)
T ss_dssp EEEEESCCSTTH-HHHHHHHTTSTTCCEEEECSSBCCTTCGGGTSGGGSGGGSSSSTTBCCCBCCCCGG----GTTCCCB
T ss_pred cCEEEECCcHHH-HHHHHHHHhCcCCcEEEEecCCcccCCCceeCcchHHHhcCCCccccccccccCCC----CCCceEe
Confidence 35554 556777 99999999953 333 135788999987 8999999
Q ss_pred ecCCCccCchhHhcccEEecCChhhHHHHHHc-CCCCCCccchHHHHHHhhcCCCCCC-------CCCCCCCCCCcEeee
Q psy14643 306 WPRGKGMGGSSVLNYMIYTRGTPRDYDRWAAM-GNPGWSYDEVYPYFLKIENMTIPEL-------RNSPHHSTTGYVPVG 377 (801)
Q Consensus 306 ~~~g~~vGGsS~in~~~~~R~~~~df~~w~~~-g~~~Ws~~~l~pyy~k~E~~~~~~~-------~~~~~~g~~g~~~~~ 377 (801)
|+|||+|||||+||+|+|.|+++.|||.|+.. |+++|+|++|+|||+|+|++..+.. .++..||..||++++
T Consensus 78 ~~rGk~lGGsS~iN~m~~~Rg~~~d~d~W~~~~G~~gWs~~~~~pyf~k~E~~~~~~~~~~~~~~~~~~~hG~~Gp~~v~ 157 (566)
T 3fim_B 78 YPRGRMLGGSSSVHYMVMMRGSTEDFDRYAAVTGDEGWNWDNIQQFVRKNEMVVPPADNHNTSGEFIPAVHGTNGSVSIS 157 (566)
T ss_dssp CCCBCBTTGGGGTSCCBCCCCCHHHHHHHHHHHTCTTSSHHHHHHHHHHHEEECCCTTCCCCTTTSCGGGSCBSSSEEEB
T ss_pred ccCCcEEcCcccccceEEecCCHHHHHHHHhcCCCCCcCHHHHHHHHHHHhccCCccccccccccCCccccCCCCCeeee
Confidence 99999999999999999999999999999998 9999999999999999999976421 134789999999999
Q ss_pred cCCCCChHHHHHHHHHHHc--CCCC-CCCCCCCCcccceeecccccCCeechhhHHhhccccCCCCeEEeeCceEEEEEe
Q psy14643 378 YNPYKSQVVDAFLESSKYV--NQST-IDYNQPENYLGFSRIQATTRNGKRVSSYHAYIEPVRNRPNLHISLNSQVTRVLI 454 (801)
Q Consensus 378 ~~~~~~~~~~~~~~a~~~~--G~~~-~~~~~~~~~~g~~~~~~~~~~g~r~s~~~~~L~~~~~~~nl~v~~~a~V~rI~~ 454 (801)
.+.+..++...|+++++++ |++. .|+|+ +...|+++++.+|++|.|+|+..+||.|+.+++||+|++++.|+||++
T Consensus 158 ~~~~~~~~~~~~~~a~~~~~~G~~~~~d~n~-~~~~G~~~~~~~~~~g~R~sa~~ayL~p~~~r~NL~Vlt~a~V~rIl~ 236 (566)
T 3fim_B 158 LPGFPTPLDDRVLATTQEQSEEFFFNPDMGT-GHPLGISWSIASVGNGQRSSSSTAYLRPAQSRPNLSVLINAQVTKLVN 236 (566)
T ss_dssp SCSSCCTHHHHHHHHHHHTHHHHCBCSCGGG-SCCCEEEECCBSEETTEECCHHHHTHHHHTTCTTEEEESSCEEEEEEC
T ss_pred cCCCCCHHHHHHHHHHHHHhcCCCccCCCCC-CCcceEEeeeeecCCCEEcCHHHHHhhhhccCCCeEEECCCEEEEEEe
Confidence 9998899999999999999 9998 57888 788999999999999999999999999999999999999999999999
Q ss_pred e---CCCCeEEEEEEEEC-C-EEEEEEeeeEEEecCCCCCCHHHHHhhCCCChhhhhhCCCceeecCC-ccccccccccc
Q psy14643 455 D---SESKKAYGVEFVKN-G-KKRIVFARKEIILSAGAINTPHILMHSGVGPREHLESLKIKVERDLP-VGENLQDHITM 528 (801)
Q Consensus 455 d---~~~~~a~gV~~~~~-g-~~~~v~A~k~VILaAGai~SprLLl~SGIG~~~~L~~~Gi~~v~~~p-VGrnl~dH~~~ 528 (801)
+ ++.++|+||++... | +.++++|+||||||||||+||||||+|||||+++|+++||++++|+| ||+|||||+.+
T Consensus 237 ~~~~~g~~rA~GVe~~~~~g~~~~~v~A~kEVILsAGai~SPqlL~lSGIGp~~~L~~~gI~vv~dlPgVG~NLqDH~~~ 316 (566)
T 3fim_B 237 SGTTNGLPAFRCVEYAEQEGAPTTTVCAKKEVVLSAGSVGTPILLQLSGIGDENDLSSVGIDTIVNNPSVGRNLSDHLLL 316 (566)
T ss_dssp CEEETTEEECCEEEEESSTTSCCEEEEEEEEEEECCHHHHHHHHHHHTTEECHHHHHHTTCCCSEECTTTTCSBBCCEEE
T ss_pred ecCCCCCCEEEEEEEEECCCceEEEEEeeeEEEEecCCcCChHHHHhcCCCChHHHhhcCCCceecCcchhhhhhcCccc
Confidence 8 22268999999953 5 88899999999999999999999999999999999999999999999 99999999986
Q ss_pred ceEEEEeCCccccc---hhh-HH-HHHHHHHhhccCCCCCCCCCccccEEEEEecCCC-----------CCCCCCCeeee
Q psy14643 529 AGLAFTHNTTELFN---YNT-ML-AQAFTMMYNISKGGGMGSIPGGVEGIGFVQTKYN-----------TDPSYPDIEFI 592 (801)
Q Consensus 529 ~~~~~~~~~~~~~~---~~~-~~-~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~-----------~~~~~p~~~~~ 592 (801)
.+.+..+...... ... .. ....+|+.. ++||++ ....+..+|.+.... .....|+++++
T Consensus 317 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~G~l~-~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~pd~~~~ 391 (566)
T 3fim_B 317 -PAAFFVNSNQTFDNIFRDSSEFNVDLDQWTNT---RTGPLT-ALIANHLAWLRLPSNSSIFQTFPDPAAGPNSAHWETI 391 (566)
T ss_dssp -CCEEEESCSCSSGGGGTCHHHHHHHHHHHHHH---SCSGGG-CCSCSEEEEECCCTTCGGGGTSCCCSSSTTSCSEEEE
T ss_pred -eEEEEeCCCcccchhhcChHHHHHHHHHHHhc---CCCCcc-cChhhheeeeccccchhhhhhhccccccCCCCCEEEE
Confidence 6777776543321 111 11 266788888 999998 455778889876421 01346788776
Q ss_pred eeccccccCCccccccccCcchhhHhhhhhccCCCCeEEEeeeecccCCCceEEecCCCCCCCceeecCCCCChHHHHHH
Q psy14643 593 FAIGSLAADSGHTVRRGMGITDECYNQAYKHLEQKNTWTIWPMLLLPKSRGRILLGSRNPLKAPLLYGNYFQDESDLWTL 672 (801)
Q Consensus 593 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~s~g~v~l~~~d~~g~P~i~~~y~~~~~D~~~~ 672 (801)
+.+..... .+........+++...+++|.|||+|+|+++||++.|+|+++|+.++.|++.+
T Consensus 392 ~~~~~~~~-------------------~~~~~~~~~~~~~~~~l~~P~SrG~V~L~s~dp~~~P~i~~~yl~~~~D~~~~ 452 (566)
T 3fim_B 392 FSNQWFHP-------------------AIPRPDTGSFMSVTNALISPVARGDIKLATSNPFDKPLINPQYLSTEFDIFTM 452 (566)
T ss_dssp EESSCCCT-------------------TSCCCSSCCEEEEEEEESSCSCCBEEECSSSCTTSCCEEECCTTCSHHHHHHH
T ss_pred ecccchhh-------------------cccCCCCCCEEEEEEeecCCccceEEEecCCCCCCCceeccccCCCccHHHHH
Confidence 54321110 00011123567788888999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCccccccccccCCCCCCCCCCCCCCCHHHHHHHHHHhCCcCcccccCcccCCCCCCCcccCCCCeeec
Q psy14643 673 VEGIKMAVNLSRTEPFQRIGSKLNPVPLPGCKQYEFESDDYWACTARQITATVHHMSGTCRMGINEDGTTVVDNELRVHG 752 (801)
Q Consensus 673 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~H~~GT~rMG~~~d~~~VVD~~~rV~G 752 (801)
+++++.+++++++++++.+..... .|++ ....+|++|++|+|....+.+|++||||||+++++++|||++|||||
T Consensus 453 ~~~~~~~~~i~~~~~~~~~~~~~~---~P~~--~~~~sd~~~~~~ir~~~~t~~H~~GTc~Mg~~~~~~~VVD~~lrV~G 527 (566)
T 3fim_B 453 IQAVKSNLRFLSGQAWADFVIRPF---DPRL--RDPTDDAAIESYIRDNANTIFHPVGTASMSPRGASWGVVDPDLKVKG 527 (566)
T ss_dssp HHHHHHHHHHHTSGGGTTTEEEES---SGGG--SCTTCHHHHHHHHHHHCEECSCCBCTTCBCCTTCSSCSBCTTCBBTT
T ss_pred HHHHHHHHHHHhCcccCCcccccc---CCCc--ccccchHHHHHHHhhcccccccccCccccCCcccCCccCCCCCeEcc
Confidence 999999999999999988764433 2331 23679999999999999999999999999976664599999999999
Q ss_pred cCCcEEeeccCCCCCCCCCChHHHHHHHHHHHHHHHhh
Q psy14643 753 IKNLRVADASVMPILIAAHPMAPIYMIGEKCADMIKDT 790 (801)
Q Consensus 753 ~~NL~V~DaSvfP~~~~~NPtlTi~AlA~R~Ad~I~~~ 790 (801)
++||||+|+||||+++++||++|+||||||+||+|+++
T Consensus 528 v~~LrVvDaSv~P~~~~~n~~~~~~~iaekaAd~I~~~ 565 (566)
T 3fim_B 528 VDGLRIVDGSILPFAPNAHTQGPIYLVGKQGADLIKAD 565 (566)
T ss_dssp CBSEEECSGGGCCSCCSSCTHHHHHHHHHHHHHHHHHT
T ss_pred CCCcEEcccccCCCCCCcCcHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999874
No 2
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=100.00 E-value=6.9e-84 Score=743.04 Aligned_cols=502 Identities=26% Similarity=0.345 Sum_probs=390.3
Q ss_pred cccccccc-ccccCccccccccccCCCC-C-----------------------------ccCCcccccCcCcccccCCCe
Q psy14643 255 KCADMIKD-TWSQGENKLYANVTPDGIR-R-----------------------------RADSIQAEKQPGQCQAMVKQR 303 (801)
Q Consensus 255 ~~a~~i~~-~~~~g~~v~A~rLse~g~~-~-----------------------------~~~~y~~~~~~~~~~~~~~~~ 303 (801)
...|+|+- .++|| ||+|+||||++.. | +.|.|.++||. ++++.
T Consensus 18 ~~yDyIIVGgG~AG-~vlA~RLse~~~~~VLlLEaG~~~~~~~~~~~~p~~~~~~~~~~~~w~~~t~~q~-----~~~r~ 91 (583)
T 3qvp_A 18 RTVDYIIAGGGLTG-LTTAARLTENPNISVLVIESGSYESDRGPIIEDLNAYGDIFGSSVDHAYETVELA-----TNNQT 91 (583)
T ss_dssp CEEEEEEECCSHHH-HHHHHHHTTSTTCCEEEECSSCCCTTSCHHHHBGGGTTTTTTSTTBCCEECCCCT-----TTSCC
T ss_pred CCccEEEECCcHHH-HHHHHHHHhCCCCcEEEEecCCCCCCCCcceechhhHHhhcCCcccCCccccccC-----CCCCe
Confidence 34677654 55777 9999999997543 3 13577788774 57899
Q ss_pred EEecCCCccCchhHhcccEEecCChhhHHHHHHcCCC-CCCccchHHHHHHhhcCCCCC--------CCCCCCCCCCCcE
Q psy14643 304 CRWPRGKGMGGSSVLNYMIYTRGTPRDYDRWAAMGNP-GWSYDEVYPYFLKIENMTIPE--------LRNSPHHSTTGYV 374 (801)
Q Consensus 304 ~~~~~g~~vGGsS~in~~~~~R~~~~df~~w~~~g~~-~Ws~~~l~pyy~k~E~~~~~~--------~~~~~~~g~~g~~ 374 (801)
+.|+|||+|||||.||+|+|.|+++.|||.|+..|+. +|+|++|+|||+|+|++..+. ..+...||..||+
T Consensus 92 ~~~~rGk~LGGsS~iN~m~y~Rg~~~Dyd~W~~~g~~~gW~~~~~lpyf~k~E~~~~~~~~~~~~~~~~~~~~hG~~Gpl 171 (583)
T 3qvp_A 92 ALIRSGNGLGGSTLVNGGTWTRPHKAQVDSWETVFGNEGWNWDNVAAYSLQAERARAPNAKQIAAGHYFNASCHGVNGTV 171 (583)
T ss_dssp CEECCBCSTTGGGGTSCCBCCCCCHHHHHHHHHTSCCTTCSHHHHHHHHHHHEEECCCCHHHHHHTCCCCGGGSCSSSSE
T ss_pred eeccCceecCCcCcccceEEEeCCHHHHHHHHHhCCCCCCChhHHHHHHHHHHhccCCcchhhcccccCCccccCCCCCE
Confidence 9999999999999999999999999999999999887 999999999999999986532 1246789999999
Q ss_pred eeecC---CCCChHHHHHHHHHHHcCCCC-CCCCCCCCcccceeeccccc-CCeechhhHHhhccccCCCCeEEeeCceE
Q psy14643 375 PVGYN---PYKSQVVDAFLESSKYVNQST-IDYNQPENYLGFSRIQATTR-NGKRVSSYHAYIEPVRNRPNLHISLNSQV 449 (801)
Q Consensus 375 ~~~~~---~~~~~~~~~~~~a~~~~G~~~-~~~~~~~~~~g~~~~~~~~~-~g~r~s~~~~~L~~~~~~~nl~v~~~a~V 449 (801)
.++.+ ....++.+.|.++++++|++. .|+|+ +...|++.++.++. +|.|+|++.+||.|+.+++||+|++++.|
T Consensus 172 ~v~~~~~~~~~~~~~~~~~~a~~~~G~~~~~D~n~-~~~~G~~~~~~t~~~~g~R~saa~ayL~p~~~r~NL~V~t~a~V 250 (583)
T 3qvp_A 172 HAGPRDTGDDYSPIVKALMSAVEDRGVPTKKDFGC-GDPHGVSMFPNTLHEDQVRSDAAREWLLPNYQRPNLQVLTGQYV 250 (583)
T ss_dssp EEBCCCCSSCBCTHHHHHHHHHHTTTCCBCCCTTS-SCCCEEECCCBSBCTTCBBCCHHHHHTTTTTTCTTEEEECSCEE
T ss_pred EecCCCCcccCCHHHHHHHHHHHHcCCCcCCCCCC-CCCceecccceeEcCCCcEecHHHHHHHHhhcCCCcEEEcCCEE
Confidence 99877 345788999999999999998 58898 88899999888875 79999999999999999999999999999
Q ss_pred EEEEeeCC--CCeEEEEEEE-ECCEEEEEEeeeEEEecCCCCCCHHHHHhhCCCChhhhhhCCCceeecCCccccccccc
Q psy14643 450 TRVLIDSE--SKKAYGVEFV-KNGKKRIVFARKEIILSAGAINTPHILMHSGVGPREHLESLKIKVERDLPVGENLQDHI 526 (801)
Q Consensus 450 ~rI~~d~~--~~~a~gV~~~-~~g~~~~v~A~k~VILaAGai~SprLLl~SGIG~~~~L~~~Gi~~v~~~pVGrnl~dH~ 526 (801)
+||+++++ +++|+||++. .+|+.++++|+||||||||||+||||||+|||||+++|+++||++++|+|||+|||||+
T Consensus 251 ~rIl~d~~~~~~ra~GV~~~~~~G~~~~v~A~kEVILsAGa~~SPqLL~lSGIGp~~~L~~~GI~vv~dLPVG~NLqDH~ 330 (583)
T 3qvp_A 251 GKVLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAVSPTILEYSGIGMKSILEPLGIDTVVDLPVGLNLQDQT 330 (583)
T ss_dssp EEEEEECSSSSCEEEEEEEESSTTCEEEEEEEEEEEECSCTTTHHHHHHHTTBSCHHHHGGGTCCCSBCCCTTCCBBCCE
T ss_pred EEEEeccCCCCCEEEEEEEEecCCcEEEEEECCEEEEeCCccCCHHHHHHcCCCCHHHHHhCCCCceeeCccccchhhCc
Confidence 99999842 4799999999 67889999999999999999999999999999999999999999999999999999999
Q ss_pred ccceEEEEeCCccc--------cchhhH----HHHHHHHHhhccCCCCCCCCCccccEEEEEecCCCCCCCCCCeeeeee
Q psy14643 527 TMAGLAFTHNTTEL--------FNYNTM----LAQAFTMMYNISKGGGMGSIPGGVEGIGFVQTKYNTDPSYPDIEFIFA 594 (801)
Q Consensus 527 ~~~~~~~~~~~~~~--------~~~~~~----~~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 594 (801)
.+ .+.+..+.... .....+ ......|+.. ..+++. ....+...|.+. ++++..+.
T Consensus 331 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~--------~~~~~~~~ 397 (583)
T 3qvp_A 331 TA-TVRSRITSAGAGQGQAAWFATFNETFGDYSEKAHELLNT---KLEQWA-EEAVARGGFHNT--------TALLIQYE 397 (583)
T ss_dssp EE-EEEEEECGGGCSBCEEEEEEEHHHHHGGGHHHHHHHHHH---CHHHHH-HHHHHTTSCSCH--------HHHHHHHH
T ss_pred cc-eEEEEecCCccccccccccccHHHhhccchHHHHHHHHh---hcchhh-cccccccCcccc--------HHHHhhhc
Confidence 86 77777764311 000000 0012222222 111111 000000000000 00110000
Q ss_pred ccccccCCccccccccCcchhhHhhhhhccCCCCeEEEeeeecccCCCceEEecCCCCCCCcee-ecCCCCChHHHHHHH
Q psy14643 595 IGSLAADSGHTVRRGMGITDECYNQAYKHLEQKNTWTIWPMLLLPKSRGRILLGSRNPLKAPLL-YGNYFQDESDLWTLV 673 (801)
Q Consensus 595 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~s~g~v~l~~~d~~g~P~i-~~~y~~~~~D~~~~~ 673 (801)
... +. .+........ .+.. ....+.+....++|.|||+|+|+++||++.|.| +++|+.++.|++.++
T Consensus 398 ~~~---~~--~~~~~~~~~~-----~~~~--~~~~~~~~~~~~~P~SrG~v~l~s~dp~~~P~i~~~~yl~~~~D~~~~~ 465 (583)
T 3qvp_A 398 NYR---DW--IVNHNVAYSE-----LFLD--TAGVASFDVWDLLPFTRGYVHILDKDPYLHHFAYDPQYFLNELDLLGQA 465 (583)
T ss_dssp HHH---HH--HHHSCCEEEE-----EEEE--CTTSEEEEEEESSCCCCBEEEESSSCGGGCCEEEECCTTCSHHHHHHHH
T ss_pred cch---hh--hccCCCCcce-----eeec--cCCCceeeeeecccCCceEEEecCCCCCCCcccccCCCCCCHHHHHHHH
Confidence 000 00 0000000000 0000 011233344458999999999999999999999 999999999999999
Q ss_pred HHHHHHHHHhcCccccccccccCCCCCCCCCCCCCCCHHHHHHHHHHhCCcCcccccCcccCCCCCCCcccCCCCeeecc
Q psy14643 674 EGIKMAVNLSRTEPFQRIGSKLNPVPLPGCKQYEFESDDYWACTARQITATVHHMSGTCRMGINEDGTTVVDNELRVHGI 753 (801)
Q Consensus 674 ~~~~~~~~i~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~H~~GT~rMG~~~d~~~VVD~~~rV~G~ 753 (801)
+++|.+++|+++.+++.+.... ..|++......+|++|++|+|....+.+|++||||||++++ ++|||++|||||+
T Consensus 466 ~~~~~~~~i~~~~~~~~~~~~~---~~pg~~~~~~~sd~~~~~~~r~~~~t~~H~~GTc~Mg~~~~-~~VVD~~lrV~Gv 541 (583)
T 3qvp_A 466 AATQLARNISNSGAMQTYFAGE---TIPGDNLAYDADLSAWTEYIPYHFRPNYHGVGTCSMMPKEM-GGVVDNAARVYGV 541 (583)
T ss_dssp HHHHHHHHHHTSTTHHHHEEEE---EESGGGSCTTCCHHHHHHHGGGSCEECSCCBCTTCBSCGGG-TCSBCTTCBBTTC
T ss_pred HHHHHHHHHHhCcchhhccccc---cCCCcccccCCCHHHHHHHHHhccCCCcCCCCceeCCCCCC-CceECCCCeEecC
Confidence 9999999999999888876432 24555434457999999999999999999999999997655 5999999999999
Q ss_pred CCcEEeeccCCCCCCCCCChHHHHHHHHHHHHHHHhhhc
Q psy14643 754 KNLRVADASVMPILIAAHPMAPIYMIGEKCADMIKDTWS 792 (801)
Q Consensus 754 ~NL~V~DaSvfP~~~~~NPtlTi~AlA~R~Ad~I~~~~~ 792 (801)
+||||+|+||||+++++||++|+||||||+||+|++++.
T Consensus 542 ~~LrVvDaSv~P~~~~~n~~~t~~aiaeraAd~I~~~~~ 580 (583)
T 3qvp_A 542 QGLRVIDGSIPPTQMSSHVMTVFYAMALKISDAILEDYA 580 (583)
T ss_dssp BSEEECSTTCCSSCCSSCSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEeecccCCCCCCcCcHHHHHHHHHHHHHHHHHhhh
Confidence 999999999999999999999999999999999999876
No 3
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=100.00 E-value=1.1e-82 Score=733.97 Aligned_cols=495 Identities=27% Similarity=0.396 Sum_probs=403.3
Q ss_pred ccccccc-ccccCccccccccccCCC-CCc-----------------------------cCCcccccCcCcccccCCCeE
Q psy14643 256 CADMIKD-TWSQGENKLYANVTPDGI-RRR-----------------------------ADSIQAEKQPGQCQAMVKQRC 304 (801)
Q Consensus 256 ~a~~i~~-~~~~g~~v~A~rLse~g~-~~~-----------------------------~~~y~~~~~~~~~~~~~~~~~ 304 (801)
..|+|+- .++|| ||+|.||||+|. +|+ .|.|.++ ++++.+
T Consensus 6 ~yDyIVVGgG~AG-~v~A~rLse~~~~~VLllEaG~~~~~~~~~i~~P~~~~~~~~~~~dW~y~t~--------~~~r~~ 76 (577)
T 3q9t_A 6 HFDFVIVGGGTAG-NTVAGRLAENPNVTVLIVEAGIGNPEDIPEITTPSSAMDLRNSKYDWAYKTT--------MVRRDD 76 (577)
T ss_dssp EEEEEEESCSHHH-HHHHHHHTTSTTSCEEEECSSCSCGGGCHHHHCGGGGGGGTTSTTBCCEEEE--------EEEETT
T ss_pred cccEEEECCcHHH-HHHHHHHHhCCCCcEEEEecCCCCCCCCceEECchhhhhccCCCcccceEEE--------ECCccc
Confidence 3576654 56777 999999999985 441 1222222 234444
Q ss_pred E------ecCCCccCchhHhcccEEecCChhhHHHHHHcCCCCCCccchHHHHHHhhcCCCCCC---CCCCCCCCCCcEe
Q psy14643 305 R------WPRGKGMGGSSVLNYMIYTRGTPRDYDRWAAMGNPGWSYDEVYPYFLKIENMTIPEL---RNSPHHSTTGYVP 375 (801)
Q Consensus 305 ~------~~~g~~vGGsS~in~~~~~R~~~~df~~w~~~g~~~Ws~~~l~pyy~k~E~~~~~~~---~~~~~~g~~g~~~ 375 (801)
. |+|||+|||||.||+|+|.|+.+.|||.|+..|+++|+|++++|||+|+|++..... .+...||..||+.
T Consensus 77 ~~~~~~~~~rGkvLGGsS~iN~m~~~rg~~~dyd~W~~~G~~gW~~~~~lpyf~k~e~~~~~~~~~~~~~~~hG~~Gpl~ 156 (577)
T 3q9t_A 77 YERIEKPNTRGKTLGGSSSLNYFTWVPGHKATFDQWEEFGGKEWTWDPLVPYLRKSATYHDDPRLYSPELEKIGGGGPIP 156 (577)
T ss_dssp EEEEEEEECCBCSTTGGGGTSCCEECCCCHHHHHTTHHHHCGGGSHHHHHHHHHHTEEEECTTCCSCGGGGGGCCSCSEE
T ss_pred cccccccccccccccCccccCceEeccCCHHHHHHHHHhCCCCCCHHHHHHHHHHHhccCCCccccCCccccCCCCCCEE
Confidence 5 999999999999999999999999999999999999999999999999999876421 1134689999999
Q ss_pred eecCCCCC---hHHHHHHHHHHHcCCCC-CCCCCCCCcccceeecccccCCeechhhHHhhccccCCCCeEEeeCceEEE
Q psy14643 376 VGYNPYKS---QVVDAFLESSKYVNQST-IDYNQPENYLGFSRIQATTRNGKRVSSYHAYIEPVRNRPNLHISLNSQVTR 451 (801)
Q Consensus 376 ~~~~~~~~---~~~~~~~~a~~~~G~~~-~~~~~~~~~~g~~~~~~~~~~g~r~s~~~~~L~~~~~~~nl~v~~~a~V~r 451 (801)
+..+.+.. ++.+.|.++++++|++. .|+|+ +...|++.++.++.+|.|+++. .|+ .+++|++|++++.|+|
T Consensus 157 v~~~~~~~~~~~~~~~~~~a~~~~G~~~~~d~n~-~~~~G~~~~~~~~~~g~R~s~~-~~l---~~r~Nl~v~~~a~v~r 231 (577)
T 3q9t_A 157 ISHAELIDEMAPFRENLTKAWKSMGQPLIENIYD-GEMDGLTHCCDTIYRGQRSGSF-LFV---KNKPNITIVPEVHSKR 231 (577)
T ss_dssp EEECCCCGGGHHHHHHHHHHHHHTTCCBCSCCSS-SCCCEEEECEESEETTEECCGG-GGS---SSCTTEEEECSEEEEE
T ss_pred eeCCCCCcccchHHHHHHHHHHHcCCCcCCCCCC-CCcCeEEeecceecCCeEeeHH-HHH---hcCCCeEEEcCcEEEE
Confidence 99877543 47788999999999998 57888 7888999999999999999876 364 5689999999999999
Q ss_pred EEeeCCCCeEEEEEEEEC-CEEEEEEeeeEEEecCCCCCCHHHHHhhCCCChhhhhhCCCceeecCC-cccccccccccc
Q psy14643 452 VLIDSESKKAYGVEFVKN-GKKRIVFARKEIILSAGAINTPHILMHSGVGPREHLESLKIKVERDLP-VGENLQDHITMA 529 (801)
Q Consensus 452 I~~d~~~~~a~gV~~~~~-g~~~~v~A~k~VILaAGai~SprLLl~SGIG~~~~L~~~Gi~~v~~~p-VGrnl~dH~~~~ 529 (801)
|++++++++|+||++... |+.++++|+||||||||+|+||+|||+|||||+++|+++||++++|+| ||+|||||+.+
T Consensus 232 i~~~~~~~~a~GV~~~~~~g~~~~v~A~keVILsaGa~~sp~lL~~SGIGp~~~L~~~GI~vv~dlP~VG~nl~DH~~~- 310 (577)
T 3q9t_A 232 LIINEADRTCKGVTVVTAAGNELNFFADREVILSQGVFETPKLLMLSGIGPTRELSRHGINTIVDSRHVGQNLMDHPGV- 310 (577)
T ss_dssp EEEETTTTEEEEEEEEETTSCEEEEEEEEEEEECSHHHHHHHHHHHTTEECHHHHHTTTCCCSEECTTTTEEEBCCEEE-
T ss_pred EEEeCCCCEEEEEEEEeCCCcEEEEEeeeEEEEcccccCChHHHHHcCCCCHHHHHHcCCCeeccCchhhhhhhcCcce-
Confidence 999965589999999964 889999999999999999999999999999999999999999999999 99999999986
Q ss_pred eEEEEeCCccccch-----hhHHH-HHHHHHhhccCCCCCCCCCccccEEEEEecCCC--------------------CC
Q psy14643 530 GLAFTHNTTELFNY-----NTMLA-QAFTMMYNISKGGGMGSIPGGVEGIGFVQTKYN--------------------TD 583 (801)
Q Consensus 530 ~~~~~~~~~~~~~~-----~~~~~-~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~--------------------~~ 583 (801)
.+.+..+....... ..... ...+|... ++||++ .+..+..+|.+.... ..
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~---~~Gpl~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (577)
T 3q9t_A 311 PFVLRVKDGFGMDDVLLRHGPKRDAVVSAYNKN---RSGPVG-SGLLELVGFPRIDKYLEKDAEYRKAKAANGGKDPFSP 386 (577)
T ss_dssp EEEEEECTTSSSHHHHTSCSHHHHHHHHHHHHH---SCSGGG-CCSEEEEEECCCHHHHTTCHHHHHHHHHTTTSCSSCT
T ss_pred eEEEEeCCCCccchhhhcchhHHHHHHHHHHhc---CCCCcc-cchhheeEEeecChhhhcchhhhhhhhccccccccCC
Confidence 77888776542211 11122 67788888 999998 556677777653210 01
Q ss_pred CCCCCeeeeeeccccccCCccccccccCcchhhHhhhhhccCCCCeEEEeeeecccCCCc-eEEecCCCCCCCceeecCC
Q psy14643 584 PSYPDIEFIFAIGSLAADSGHTVRRGMGITDECYNQAYKHLEQKNTWTIWPMLLLPKSRG-RILLGSRNPLKAPLLYGNY 662 (801)
Q Consensus 584 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~s~g-~v~l~~~d~~g~P~i~~~y 662 (801)
...|++++.+.+...... .. .+........+++...+++|.||| +|+|+|+||++.|.|+++|
T Consensus 387 ~~~p~~~~~~~~~~~~~~---------~~-------~~~~~~~~~~~~~~~~l~~P~SrGG~V~L~S~dp~~~P~i~p~y 450 (577)
T 3q9t_A 387 LGQPHFELDFVCMFGTAF---------QW-------HFPTPKTGDHLTVVVDLVRPISDPGEVTLNSADPFQQPNINLNF 450 (577)
T ss_dssp TSCCSEEEEEESSCCGGG---------CS-------SSCCCSSSEEEEEEEEESSCCSCCEEEECSCSCTTSCCEEECCT
T ss_pred CCCceEEEEecccccccc---------cc-------cccCCCCCCEEEEEEEeeeccccCCEEEeCCCCCCCCceEecCc
Confidence 345777776654211000 00 000111234577888889999999 9999999999999999999
Q ss_pred CCChHHHHHHHHHHHHHHHHh-cCccccccccccCCCCCCCCCCCCCCCHHHHHHHHHHhCCcCcccccCcccCCCCCCC
Q psy14643 663 FQDESDLWTLVEGIKMAVNLS-RTEPFQRIGSKLNPVPLPGCKQYEFESDDYWACTARQITATVHHMSGTCRMGINEDGT 741 (801)
Q Consensus 663 ~~~~~D~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~H~~GT~rMG~~~d~~ 741 (801)
+.++.|++.++++++.+++|+ ++++++.+..... .|+. ...+|++|++|+|....+.+|++||||||++++ +
T Consensus 451 l~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~e~---~p~~---~~~sd~~~~~~ir~~~~t~~H~~GTc~Mg~~~~-~ 523 (577)
T 3q9t_A 451 FANDLDIIAMREGIRFSYDLLFKGEGFKDLVESEY---PWEM---PLDSDKEMHRAVLDRCQTAFHPTGTARLSKNID-Q 523 (577)
T ss_dssp TCSHHHHHHHHHHHHHHHHHHHHSTTGGGTEEEEE---SSCC---CTTCHHHHHHHHHHHCEECSCCBCTTCBCSSTT-T
T ss_pred CCCccHHHHHHHHHHHHHHHHHhChhhhhcccccc---CCCC---CcCCHHHHHHHHHhccccccccccceecCCCCC-C
Confidence 999999999999999999999 8888888765432 2332 367999999999999999999999999998666 5
Q ss_pred cccCCCCeeeccCCcEEeeccCCCCCCCCCChHHHHHHHHHHHHHHHhhhc
Q psy14643 742 TVVDNELRVHGIKNLRVADASVMPILIAAHPMAPIYMIGEKCADMIKDTWS 792 (801)
Q Consensus 742 ~VVD~~~rV~G~~NL~V~DaSvfP~~~~~NPtlTi~AlA~R~Ad~I~~~~~ 792 (801)
||||++|||||++||||+|+||||+++++||++|+||||||+||+|+++++
T Consensus 524 ~VVD~~lrV~Gv~~LrVvDaSv~P~~~~~n~~a~~~~iaekaAd~I~~~~~ 574 (577)
T 3q9t_A 524 GVVDPKLKVHGIKKLRVADASVIPIIPDCRIQNSVYAVGEKCADMIKAEHK 574 (577)
T ss_dssp CSBCTTCBBTTCBSEEECSGGGCSSCCSSCCHHHHHHHHHHHHHHHHHHCT
T ss_pred ceECCCCeEeCCCCcEEeecccccCCCCCccHHHHHHHHHHHHHHHHhhhh
Confidence 999999999999999999999999999999999999999999999998764
No 4
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=100.00 E-value=1.6e-80 Score=722.18 Aligned_cols=503 Identities=24% Similarity=0.297 Sum_probs=386.7
Q ss_pred ccccc-cccccCcccccccccc-CCCCCc-----------------------------cCCcccccCcCcccccCCCeEE
Q psy14643 257 ADMIK-DTWSQGENKLYANVTP-DGIRRR-----------------------------ADSIQAEKQPGQCQAMVKQRCR 305 (801)
Q Consensus 257 a~~i~-~~~~~g~~v~A~rLse-~g~~~~-----------------------------~~~y~~~~~~~~~~~~~~~~~~ 305 (801)
.|+|+ ..+.+| +++|.||+| .+.+++ .|.|.++| .++++.+.
T Consensus 25 ~d~iivG~G~~g-~~~a~~l~~~~~~~v~~~e~g~~~~~~~~~~~~p~~~~~~~~~~~~w~~~t~p------~~~~~~~~ 97 (587)
T 1gpe_A 25 YDYIIAGGGLTG-LTVAAKLTENPKIKVLVIEKGFYESNDGAIIEDPNAYGQIFGTTVDQNYLTVP------LINNRTNN 97 (587)
T ss_dssp EEEEEECCSHHH-HHHHHHHHTSTTCCEEEEESSCCCTTSCHHHHCGGGTTTTTTSTTBCCEECCC------CTTSCCCE
T ss_pred CCEEEECcCHHH-HHHHHHHHhCCCCcEEEEecCCccCCCcccccChhhHhhccCCcccccccccc------CCCCceee
Confidence 45554 456777 999999999 566551 11222333 26788999
Q ss_pred ecCCCccCchhHhcccEEecCChhhHHHHHHc-CCCCCCccchHHHHHHhhcCCCCCC--------CCCCCCCCCCcEee
Q psy14643 306 WPRGKGMGGSSVLNYMIYTRGTPRDYDRWAAM-GNPGWSYDEVYPYFLKIENMTIPEL--------RNSPHHSTTGYVPV 376 (801)
Q Consensus 306 ~~~g~~vGGsS~in~~~~~R~~~~df~~w~~~-g~~~Ws~~~l~pyy~k~E~~~~~~~--------~~~~~~g~~g~~~~ 376 (801)
|+|||+|||||+||+|+|+|+++.||+.|+.. |+++|+|++|+|||+|+|+++++.. .+...||..||+++
T Consensus 98 ~~rGk~lGGsS~in~~~~~R~~~~D~d~W~~~~G~~gW~~~~l~pyf~k~E~~~~~~~~~~~~G~~~~~~~~g~~Gpl~v 177 (587)
T 1gpe_A 98 IKAGKGLGGSTLINGDSWTRPDKVQIDSWEKVFGMEGWNWDNMFEYMKKAEAARTPTAAQLAAGHSFNATCHGTNGTVQS 177 (587)
T ss_dssp ECCBCSTTGGGGTSCCEECCCCHHHHHHHHHTTCCTTCSHHHHHHHHHHTEEECCCCHHHHHHTCCCCGGGCCBSSSEEE
T ss_pred eeccccccccccccceEEecCCHHHHHHHHHhcCCCCCCHHHHHHHHHHHhcccCCcccccccccccCccccCCCCCEEE
Confidence 99999999999999999999999999999998 9999999999999999999987521 14567999999999
Q ss_pred ecC---CCCChHHHHHHHHHHHcCCCC-CCCCCCCCcccceeecccc-cCCeechhhHHhhccccCCCCeEEeeCceEEE
Q psy14643 377 GYN---PYKSQVVDAFLESSKYVNQST-IDYNQPENYLGFSRIQATT-RNGKRVSSYHAYIEPVRNRPNLHISLNSQVTR 451 (801)
Q Consensus 377 ~~~---~~~~~~~~~~~~a~~~~G~~~-~~~~~~~~~~g~~~~~~~~-~~g~r~s~~~~~L~~~~~~~nl~v~~~a~V~r 451 (801)
+++ ....+..+.|.++++++|++. .|+|+ +.+.|++.|+.++ .+|.|+|+..+||.++.+++|++|++++.|+|
T Consensus 178 ~~~~~~~~~~~~~~~~~~a~~~~G~~~~~d~n~-~~~~G~~~~~~~~~~~g~R~sa~~~~l~~~~~~~nl~i~~~~~v~~ 256 (587)
T 1gpe_A 178 GARDNGQPWSPIMKALMNTVSALGVPVQQDFLC-GHPRGVSMIMNNLDENQVRVDAARAWLLPNYQRSNLEILTGQMVGK 256 (587)
T ss_dssp BCCCCSSCBCTHHHHHHHHHHHTTCCBSCCTTS-SCCCEEECCEESBCTTCCBCCHHHHHTTTTTTCTTEEEEESCEEEE
T ss_pred ccCCCcCCCCHHHHHHHHHHHHcCCCcCCCCCC-CCCCEEEecceEECCCCcccCHHHHHHHHhhcCCCcEEEcCCEEEE
Confidence 865 366889999999999999998 47888 7888999988765 47999999999999888899999999999999
Q ss_pred EEeeCCC--CeEEEEEEE-ECCEEEEEEeeeEEEecCCCCCCHHHHHhhCCCChhhhhhCCCceeecCCccccccccccc
Q psy14643 452 VLIDSES--KKAYGVEFV-KNGKKRIVFARKEIILSAGAINTPHILMHSGVGPREHLESLKIKVERDLPVGENLQDHITM 528 (801)
Q Consensus 452 I~~d~~~--~~a~gV~~~-~~g~~~~v~A~k~VILaAGai~SprLLl~SGIG~~~~L~~~Gi~~v~~~pVGrnl~dH~~~ 528 (801)
|++++++ ++|+||++. .+|+.++++|+|+||||||+|+||+|||+|||||+++|+++||++++|+|||||||||+..
T Consensus 257 l~~~~~~~~~~~~GV~~~~~~g~~~~v~A~k~VILaaG~~~sp~lL~~SGIGp~~~L~~~gI~vv~dlPVG~nL~DH~~~ 336 (587)
T 1gpe_A 257 VLFKQTASGPQAVGVNFGTNKAVNFDVFAKHEVLLAAGSAISPLILEYSGIGLKSVLDQANVTQLLDLPVGINMQDQTTT 336 (587)
T ss_dssp EEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEEECSCTTTHHHHHHHTTEECHHHHHHTTCCCSEECCTTCSBBCCEEE
T ss_pred EEECCCCCCCEEEEEEEEeCCCcEEEEEecccEEEccCCCCCHHHHHhCCCCCHHHHHhCCCCeEEeCCCCcchhcCccc
Confidence 9998643 589999998 7899999999889999999999999999999999999999999999999999999999986
Q ss_pred ceEEEEeCCccccchhh-HHH-HHHHHHhhccCCCCCCCCCccccEEEEEecCCCCCC----C--CCCeeeeeecccccc
Q psy14643 529 AGLAFTHNTTELFNYNT-MLA-QAFTMMYNISKGGGMGSIPGGVEGIGFVQTKYNTDP----S--YPDIEFIFAIGSLAA 600 (801)
Q Consensus 529 ~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~----~--~p~~~~~~~~~~~~~ 600 (801)
.+.+.+++........ ... ....|... +.|++. ....+...|.+....... . .|+++..+... ..
T Consensus 337 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 409 (587)
T 1gpe_A 337 -TVSSRASSAGAGQGQAVFFANFTETFGDY---APQARD-LLNTKLDQWAEETVARGGFHNVTALKVQYENYRNWL--LD 409 (587)
T ss_dssp -EEEEEECGGGCSBCEEEEEEEHHHHHGGG---HHHHHH-HHHHSHHHHHHHHHHTTSCSCHHHHHHHHHHHHHHH--HH
T ss_pred -ceEEEeCCCcccccchHHHHHHHHHHHhC---CCCCcc-ccccceeeEeecccccccccccccccccHHHHhhhc--cC
Confidence 7777776542211000 000 22233322 233322 000010111110000000 0 00000000000 00
Q ss_pred CCccccccccCcchhhHhhhhhc-cCCCCeEEEeeeecccCCCceEEecCCCCCCCc-eeecCCCCChHHHHHHHHHHHH
Q psy14643 601 DSGHTVRRGMGITDECYNQAYKH-LEQKNTWTIWPMLLLPKSRGRILLGSRNPLKAP-LLYGNYFQDESDLWTLVEGIKM 678 (801)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~p~s~g~v~l~~~d~~g~P-~i~~~y~~~~~D~~~~~~~~~~ 678 (801)
. .+. .... ......+++...+++|.|||+|+|+++|+++.| +|+++|+.++.|++.++++++.
T Consensus 410 ~---------~~~------~~~~~~~~~~~~~~~~~~~~P~srG~V~L~s~dp~~~P~~i~~~y~~~~~D~~~~~~~~~~ 474 (587)
T 1gpe_A 410 E---------DVA------FAELFMDTEGKINFDLWDLIPFTRGSVHILSSDPYLWQFANDPKFFLNEFDLLGQAAASKL 474 (587)
T ss_dssp S---------CCE------EEEEEEECTTEEEEEEEESSCCCCBEEEESSSCGGGTCEEEECCTTSSHHHHHHHHHHHHH
T ss_pred C---------CCc------ceeeeecCCCcEEEEEEecCCccceeEEeCCCCcccCccEeecccCCChHHHHHHHHHHHH
Confidence 0 000 0000 001234667777889999999999999999999 9999999999999999999999
Q ss_pred HHHHhcCccccccccccCCCCCCCCCCCCCCCHHHHHHHHHHhCCcCcccccCcccCCCCCCCcccCCCCeeeccCCcEE
Q psy14643 679 AVNLSRTEPFQRIGSKLNPVPLPGCKQYEFESDDYWACTARQITATVHHMSGTCRMGINEDGTTVVDNELRVHGIKNLRV 758 (801)
Q Consensus 679 ~~~i~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~H~~GT~rMG~~~d~~~VVD~~~rV~G~~NL~V 758 (801)
+++|+++.+++.+.... ..|+.......+|++|++|+|....+.+|++||||||++++ +||||++|||||++||||
T Consensus 475 ~~~i~~~~~~~~~~~~~---~~pg~~~~~~~sd~~~~~~ir~~~~t~~H~~GTcrMG~~~~-~sVVD~~lrV~Gv~nLrV 550 (587)
T 1gpe_A 475 ARDLTSQGAMKEYFAGE---TLPGYNLVQNATLSQWSDYVLQNFRPNWHAVSSCSMMSREL-GGVVDATAKVYGTQGLRV 550 (587)
T ss_dssp HHHHHTSTTHHHHEEEE---EESGGGSCTTCCHHHHHHHHHHSCEECSCCBCTTCBSCGGG-TCSBCTTCBBTTCBSEEE
T ss_pred HHHHHcCcchhhhcccc---cCCCccccCCCCHHHHHHHHHHhcCcccCccCccccCCCCC-CceECCCCEEECCCCcEE
Confidence 99999998888775332 12332212347899999999999999999999999996554 599999999999999999
Q ss_pred eeccCCCCCCCCCChHHHHHHHHHHHHHHHhhhcc
Q psy14643 759 ADASVMPILIAAHPMAPIYMIGEKCADMIKDTWSQ 793 (801)
Q Consensus 759 ~DaSvfP~~~~~NPtlTi~AlA~R~Ad~I~~~~~~ 793 (801)
+|+||||+++++||++|+||||||+||+|++++.+
T Consensus 551 vDaSv~P~~~~~Np~~ti~aiAeraAd~I~~~~~~ 585 (587)
T 1gpe_A 551 IDGSIPPTQVSSHVMTIFYGMALKVADAILDDYAK 585 (587)
T ss_dssp CSTTCCSSCCSSCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeeccCCCCCCcchHHHHHHHHHHHHHHHHhhhhc
Confidence 99999999999999999999999999999988753
No 5
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=100.00 E-value=4.2e-77 Score=688.86 Aligned_cols=480 Identities=30% Similarity=0.448 Sum_probs=390.9
Q ss_pred ccccc-cccccCccccccccccC-CCCCc----------------------------cCCcccccCcCcccccCCCeEEe
Q psy14643 257 ADMIK-DTWSQGENKLYANVTPD-GIRRR----------------------------ADSIQAEKQPGQCQAMVKQRCRW 306 (801)
Q Consensus 257 a~~i~-~~~~~g~~v~A~rLse~-g~~~~----------------------------~~~y~~~~~~~~~~~~~~~~~~~ 306 (801)
.|+|+ ..+.+| +++|.||+|+ +.+++ .|.|.++|+.+ +++.+.|
T Consensus 14 ~d~~ivG~G~~G-~~~a~~l~~~~~~~v~~~e~g~~~~~~~~~~~p~~~~~~~~~~~~w~~~~~p~~~-----~~~~~~~ 87 (546)
T 2jbv_A 14 FDYIVVGGGSAG-AAVAARLSEDPAVSVALVEAGPDDRGVPEVLQLDRWMELLESGYDWDYPIEPQEN-----GNSFMRH 87 (546)
T ss_dssp EEEEEECCSHHH-HHHHHHHTTSTTSCEEEECSSCCCTTCHHHHBGGGGGGGTTSTTBCCEEBCCCSS-----SCTTCEE
T ss_pred CCEEEECcCHHH-HHHHHHHHhCCCCCEEEEecCCcCCCCccccChhhHHhhcCCcccccccccccCC-----CCceEEe
Confidence 45544 556777 9999999998 55551 01223333331 4678899
Q ss_pred cCCCccCchhHhcccEEecCChhhHHHHHH-cCCCCCCccchHHHHHHhhcCCCCCCCCCCCCCCCCcEeeecCCCCChH
Q psy14643 307 PRGKGMGGSSVLNYMIYTRGTPRDYDRWAA-MGNPGWSYDEVYPYFLKIENMTIPELRNSPHHSTTGYVPVGYNPYKSQV 385 (801)
Q Consensus 307 ~~g~~vGGsS~in~~~~~R~~~~df~~w~~-~g~~~Ws~~~l~pyy~k~E~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~ 385 (801)
++||+|||||.||+|+|+|+.+.||+.|+. .|+++|+|++|+|||+|+|+++++.. +...||..|++++..+.+..+.
T Consensus 88 ~rGk~lGGsS~in~~~~~R~~~~d~d~w~~~~G~~gW~~~~l~pyf~k~e~~~~~~~-~~~~~g~~Gpl~v~~~~~~~~~ 166 (546)
T 2jbv_A 88 ARAKVMGGCSSHNSCIAFWAPREDLDEWEAKYGATGWNAEAAWPLYKRLETNEDAGP-DAPHHGDSGPVHLMNVPPKDPT 166 (546)
T ss_dssp CCBCSTTGGGGTSCCBCCCCCHHHHHHHHHTTCCTTCSHHHHHHHHHHHEEETTCBT-TBTTSCBSCSEEEEECCSCCHH
T ss_pred ecccccccCccccceEEecCCHHHHHHHHHhcCCCCCCHHHHHHHHHHHhhccCCCC-ccccCCCCCCEEEecCCCCCHH
Confidence 999999999999999999999999999998 79999999999999999999987321 1568899999999888888899
Q ss_pred HHHHHHHHHHcCCCCCCCCCCCC--cccceeeccccc-CCeechhhHHhhccccCCCCeEEeeCceEEEEEeeCCCCeEE
Q psy14643 386 VDAFLESSKYVNQSTIDYNQPEN--YLGFSRIQATTR-NGKRVSSYHAYIEPVRNRPNLHISLNSQVTRVLIDSESKKAY 462 (801)
Q Consensus 386 ~~~~~~a~~~~G~~~~~~~~~~~--~~g~~~~~~~~~-~g~r~s~~~~~L~~~~~~~nl~v~~~a~V~rI~~d~~~~~a~ 462 (801)
.+.|.++++++|++..++|+ .. +.|++.|+.+|. +|.|+|+..+||.++.+++|++|++++.|++|+++++ ++++
T Consensus 167 ~~~~~~a~~~~G~~~~d~n~-~~~~~~g~~~~~~~~~~~g~R~s~~~a~l~~a~~~~~~~i~~~~~V~~i~~~~~-~~~~ 244 (546)
T 2jbv_A 167 GVALLDACEQAGIPRAKFNT-GTTVVNGANFFQINRRADGTRSSSSVSYIHPIVEQENFTLLTGLRARQLVFDAD-RRCT 244 (546)
T ss_dssp HHHHHHHHHHTTCCBCCSSS-SSCCSSEEEECEECBCTTSBBCCHHHHHTGGGTTCTTEEEECSCEEEEEEECTT-SBEE
T ss_pred HHHHHHHHHHCCCCccCCCC-CCcCcceEEeeeeecCCCCeEcCHHHHHHHHHhcCCCcEEEeCCEEEEEEECCC-CeEE
Confidence 99999999999999887777 66 889999999999 9999999999999988889999999999999999753 6899
Q ss_pred EEEEEEC--CEEEEEEeeeEEEecCCCCCCHHHHHhhCCCChhhhhhCCCceeecCC-cccccccccccceEEEEeCCcc
Q psy14643 463 GVEFVKN--GKKRIVFARKEIILSAGAINTPHILMHSGVGPREHLESLKIKVERDLP-VGENLQDHITMAGLAFTHNTTE 539 (801)
Q Consensus 463 gV~~~~~--g~~~~v~A~k~VILaAGai~SprLLl~SGIG~~~~L~~~Gi~~v~~~p-VGrnl~dH~~~~~~~~~~~~~~ 539 (801)
||++..+ |+.++++|+|+||||||+++||+||++|||||+++|+++||++++|+| ||+|||||+.. .+.+.+++..
T Consensus 245 GV~~~~~~~g~~~~i~A~k~VIlaaG~~~sp~lL~~SGiG~~~~L~~~gi~~~~dlP~VG~nL~dH~~~-~~~~~~~~~~ 323 (546)
T 2jbv_A 245 GVDIVDSAFGHTHRLTARNEVVLSTGAIDTPKLLMLSGIGPAAHLAEHGIEVLVDSPGVGEHLQDHPEG-VVQFEAKQPM 323 (546)
T ss_dssp EEEEESSTTSCEEEEEEEEEEEECSHHHHHHHHHHHTTEECHHHHHHTTCCCSEECTTTTCSBBCCEEC-CEEEEESSCC
T ss_pred EEEEEECCCCcEEEEEeCccEEEecCccCCchhhhhcCCCchHHHHhcCCceEeeCcchhhhhhhCccc-eEEEEecCCC
Confidence 9999865 888899998899999999999999999999999999999999999999 99999999987 6777766542
Q ss_pred ccchhhHHHHHHHHHhhccCCCCCCCCCccccEEEEEecCCCCCCCCCCeeeeeeccccccCCccccccccCcchhhHhh
Q psy14643 540 LFNYNTMLAQAFTMMYNISKGGGMGSIPGGVEGIGFVQTKYNTDPSYPDIEFIFAIGSLAADSGHTVRRGMGITDECYNQ 619 (801)
Q Consensus 540 ~~~~~~~~~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (801)
. . .. ....+...|.+.... ...|++++.+.+...... +. .
T Consensus 324 ~-------------------~---~~-~~~~~~~~f~~~~~~--~~~p~~~~~~~~~~~~~~----~~---~-------- 363 (546)
T 2jbv_A 324 V-------------------A---ES-TQWWEIGIFTPTEDG--LDRPDLMMHYGSVPFDMN----TL---R-------- 363 (546)
T ss_dssp C-------------------S---CC-SSSCCEEEEECSSTT--CSSCSEEEEEESSCCCTT----TG---G--------
T ss_pred c-------------------c---cc-cchhheEEEEecCCC--CCCCceEEEecccccccc----cc---c--------
Confidence 1 0 00 122345567664322 346788877654321100 00 0
Q ss_pred hhhccCCCCeEEEeeeecccCCCceEEecCCCCCCCceeecCCCCChH--HHHHHHHHHHHHHHHhcCccccccccccCC
Q psy14643 620 AYKHLEQKNTWTIWPMLLLPKSRGRILLGSRNPLKAPLLYGNYFQDES--DLWTLVEGIKMAVNLSRTEPFQRIGSKLNP 697 (801)
Q Consensus 620 ~~~~~~~~~~~~~~~~~~~p~s~g~v~l~~~d~~g~P~i~~~y~~~~~--D~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 697 (801)
.........+++...+.+|.|||+|+|+++|+++.|.|+++|+.++. |++.+.++++.+++++++.+++.+.....
T Consensus 364 -~g~~~~~~~~~~~~~~~~P~srG~V~L~s~dp~~~P~I~~~y~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~~- 441 (546)
T 2jbv_A 364 -HGYPTTENGFSLTPNVTHARSRGTVRLRSRDFRDKPMVDPRYFTDPEGHDMRVMVAGIRKAREIAAQPAMAEWTGREL- 441 (546)
T ss_dssp -GTCCCCSSEEEEEEEETTCCCCBEEECSSSCTTSCCEEECCTTCCTTCHHHHHHHHHHHHHHHHHTSGGGTTTEEEEE-
T ss_pred -cCccCCCCeEEEEEEEcccCcccEEEecCCCCCCCceecccccCCCchhHHHHHHHHHHHHHHHHcCcchhhcccccc-
Confidence 00001124566677788999999999999999999999999999999 99999999999999999988877653322
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHhCCcCcccccCcccCCCCCCCcccCCCCeeeccCCcEEeeccCCCCCCCCCChHHHH
Q psy14643 698 VPLPGCKQYEFESDDYWACTARQITATVHHMSGTCRMGINEDGTTVVDNELRVHGIKNLRVADASVMPILIAAHPMAPIY 777 (801)
Q Consensus 698 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~H~~GT~rMG~~~d~~~VVD~~~rV~G~~NL~V~DaSvfP~~~~~NPtlTi~ 777 (801)
.|+. ...+|++|++|++....+.+|++||||||+.+|++||||++|||||++||||+|+||||+++++||++|+|
T Consensus 442 --~p~~---~~~sd~~~~~~ir~~~~~~~H~~GTcrMG~~~d~~~VVD~~lrV~Gv~nLrVvDaSv~P~~~~~np~~ti~ 516 (546)
T 2jbv_A 442 --SPGV---EAQTDEELQDYIRKTHNTVYHPVGTVRMGAVEDEMSPLDPELRVKGVTGLRVADASVMPEHVTVNPNITVM 516 (546)
T ss_dssp --ESCT---TCCSHHHHHHHHHHHCEECSCCBCTTCBCCTTCTTCSBCTTCBBTTSBSEEECSGGGCSSCCSSCCHHHHH
T ss_pred --cCCC---CCCCHHHHHHHHHhcCCcccccccccccCCCCCCCceECCCCEEECCCCeEEeecccCCCCCCcchHHHHH
Confidence 2432 36799999999999999999999999999744457999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhcc
Q psy14643 778 MIGEKCADMIKDTWSQ 793 (801)
Q Consensus 778 AlA~R~Ad~I~~~~~~ 793 (801)
|||||+||+|++++..
T Consensus 517 aiAeraAd~I~~~~~~ 532 (546)
T 2jbv_A 517 MIGERCADLIRSARAG 532 (546)
T ss_dssp HHHHHHHHHC------
T ss_pred HHHHHHHHHHHhhccc
Confidence 9999999999988753
No 6
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=100.00 E-value=2.5e-76 Score=684.22 Aligned_cols=472 Identities=27% Similarity=0.435 Sum_probs=386.9
Q ss_pred cccccc-ccccCccccccccccCCC-CC---------------------------ccCCcccccCcCcccccCCCeEEec
Q psy14643 257 ADMIKD-TWSQGENKLYANVTPDGI-RR---------------------------RADSIQAEKQPGQCQAMVKQRCRWP 307 (801)
Q Consensus 257 a~~i~~-~~~~g~~v~A~rLse~g~-~~---------------------------~~~~y~~~~~~~~~~~~~~~~~~~~ 307 (801)
.|+|+. .+++| ||+|+||||++. +| +.|.|.++||.+ ++++.+.|+
T Consensus 18 yD~IIVGsG~aG-~v~A~rLse~~~~~VLvLEaG~~~~~~~~~~p~~~~~~~~~~~dw~~~t~p~~~----~~~~~~~~~ 92 (526)
T 3t37_A 18 CDIVIVGGGSAG-SLLAARLSEDPDSRVLLIEAGEEPTDPDIWNPAAWPALQGRSYDWDYRTEAQAG----TAGRAHHWA 92 (526)
T ss_dssp EEEEEECCSHHH-HHHHHHHTTSTTSCEEEECSSBCCCCGGGGSGGGGGGTTTSTTBCCEECCCBGG----GTTBCCEEC
T ss_pred eeEEEECccHHH-HHHHHHHHhCCCCeEEEEcCCCCCCCcchhChhhHhhccCCccccCccccccCC----CCCCeEecc
Confidence 466654 45666 999999999654 44 134688889887 889999999
Q ss_pred CCCccCchhHhcccEEecCChhhHHHHHHc-CCCCCCccchHHHHHHhhcCCCCCCCCCCCCCCCCcEeeecCC-CCChH
Q psy14643 308 RGKGMGGSSVLNYMIYTRGTPRDYDRWAAM-GNPGWSYDEVYPYFLKIENMTIPELRNSPHHSTTGYVPVGYNP-YKSQV 385 (801)
Q Consensus 308 ~g~~vGGsS~in~~~~~R~~~~df~~w~~~-g~~~Ws~~~l~pyy~k~E~~~~~~~~~~~~~g~~g~~~~~~~~-~~~~~ 385 (801)
|||+|||||+||+|+|+|+++.||+.|++. ++.+|+|++++|||+++|+.... ....++..|++++..+. ...|+
T Consensus 93 rG~~lGGsS~in~~~~~R~~~~Dfd~w~~~~~~~~w~~~~~~pyf~~~E~~~~~---~~~~~~~~g~~~~~~~~~~~~p~ 169 (526)
T 3t37_A 93 RGRLIGGSSCLHAMGYMRGHPSDFQAWVDASGDRRWGWDELLPVFQAIEDHPLG---GDGIHGKGGPLPIHLPADEVSPL 169 (526)
T ss_dssp CBCBTTGGGGTSCCBCCCCCHHHHHHHHHHHSCGGGSHHHHHHHHHHHEECTTT---TSSSSCSSCSEECBCCSTTSCHH
T ss_pred CccEECcHHHHhhCEEecCCHHHHHHHHHhcCCCCCChhhhhhhhhhhhhccCC---CccccCcCCCcCcccccccCCHH
Confidence 999999999999999999999999999775 78999999999999999998764 45677888888877654 45789
Q ss_pred HHHHHHHHHHcCCCCC-CCCCCCCcccceeecccccCCeechhhHHhhccc-cCCCCeEEeeCceEEEEEeeCCCCeEEE
Q psy14643 386 VDAFLESSKYVNQSTI-DYNQPENYLGFSRIQATTRNGKRVSSYHAYIEPV-RNRPNLHISLNSQVTRVLIDSESKKAYG 463 (801)
Q Consensus 386 ~~~~~~a~~~~G~~~~-~~~~~~~~~g~~~~~~~~~~g~r~s~~~~~L~~~-~~~~nl~v~~~a~V~rI~~d~~~~~a~g 463 (801)
.+.|.++++++|++.. +.+. +.+.+++.|+..|..|.|.|+..+|+.++ ..++|++|++++.|+||++++ ++|+|
T Consensus 170 ~~~~~~~~~~~G~~~~~~~~~-~~~~~~~~~~~~~~~g~r~s~~~~~~~~~~~~r~nl~v~~~~~v~~i~~~~--~~a~g 246 (526)
T 3t37_A 170 ARAFIEAGASLGLPRLEGHNS-GEMIGVTPNSLNIRDGRRVTAADAWLTKAVRGRKNLTILTGSRVRRLKLEG--NQVRS 246 (526)
T ss_dssp HHHHHHHHHHTTCCBCSSSCS-SCCBSBCCCCBCEETTEECCHHHHHSCHHHHTCTTEEEECSCEEEEEEEET--TEEEE
T ss_pred HHHHHHHHHHcCCCcccCCCC-CcccccccccccccCCcccccccccccccccCCCCeEEEeCCEEEEEEecC--CeEEE
Confidence 9999999999999984 5666 77888899999999999999999999764 578999999999999999987 79999
Q ss_pred EEEEECCEEEEEEeeeEEEecCCCCCCHHHHHhhCCCChhhhhhCCCceeecCC-cccccccccccceEEEEeCCccccc
Q psy14643 464 VEFVKNGKKRIVFARKEIILSAGAINTPHILMHSGVGPREHLESLKIKVERDLP-VGENLQDHITMAGLAFTHNTTELFN 542 (801)
Q Consensus 464 V~~~~~g~~~~v~A~k~VILaAGai~SprLLl~SGIG~~~~L~~~Gi~~v~~~p-VGrnl~dH~~~~~~~~~~~~~~~~~ 542 (801)
|++..+++..++.| |+||||||||+||+|||+|||||+++|+++||+++.|+| ||+|||||+......+..+.+.
T Consensus 247 v~~~~~~~~~~~~a-~~VILsAGai~SP~LLl~SGig~~~~l~~~gi~vv~dlp~VG~nl~DH~~~~~~~~~~~~~~--- 322 (526)
T 3t37_A 247 LEVVGRQGSAEVFA-DQIVLCAGALESPALLMRSGIGPHDVLDAAGVGCLIDMPDIGRNLQDHLLGAGNLYAARKPV--- 322 (526)
T ss_dssp EEEEETTEEEEEEE-EEEEECSHHHHHHHHHHHTTEECHHHHHHHTCCCSEECTTTTCSBBCCEEEEEEEEEESSCC---
T ss_pred EEEEecCceEEEee-cceEEcccccCCcchhhhccCCchhhhhccCCCeEecCCccccccccccccceeEEeccCCc---
Confidence 99998888888988 699999999999999999999999999999999999999 9999999997523333333322
Q ss_pred hhhHHHHHHHHHhhccCCCCCCCCCccccEEEEEecCCCCCCCCCCeeeeeeccccccCCccccccccCcchhhHhhhhh
Q psy14643 543 YNTMLAQAFTMMYNISKGGGMGSIPGGVEGIGFVQTKYNTDPSYPDIEFIFAIGSLAADSGHTVRRGMGITDECYNQAYK 622 (801)
Q Consensus 543 ~~~~~~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 622 (801)
+.......+...|.+.........|+++..+........ .+.
T Consensus 323 --------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~ 364 (526)
T 3t37_A 323 --------------------PPSRLQHSESMAYMRADSFTAAGQPEIVVGCGVAPIVSE------------------SFP 364 (526)
T ss_dssp --------------------CCCSSCSEEEEEEECSSCSSCCSSCCEEEEEESSCCCCT------------------TSC
T ss_pred --------------------chHhhcchhhhhhhhcccccccCCcceeeeccccccccc------------------ccc
Confidence 111122334455555433222345666554432221111 011
Q ss_pred ccCCCCeEEEeeeecccCCCceEEecCCCCCCCceeecCCCCChHHHHHHHHHHHHHHHHhcCccccccccccCCCCCCC
Q psy14643 623 HLEQKNTWTIWPMLLLPKSRGRILLGSRNPLKAPLLYGNYFQDESDLWTLVEGIKMAVNLSRTEPFQRIGSKLNPVPLPG 702 (801)
Q Consensus 623 ~~~~~~~~~~~~~~~~p~s~g~v~l~~~d~~g~P~i~~~y~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~p~ 702 (801)
.......+++...+.+|.|||+|++++.|+.+.|.|+++|+.++.|++.++++++.+++++++..+..+..... .|+
T Consensus 365 ~~~~~~~~~~~~~l~~p~srG~v~~~s~dp~~~p~i~~~~~~~~~d~~~~~~~~~~~r~i~~~~~~~~~~~~~~---~pg 441 (526)
T 3t37_A 365 APAAGSAYSLLFGITHPTSRGSVRISGPELGDRLIIDPAYLQTGRDRERFRRALEASRTIGHRDELAGWREREL---LPG 441 (526)
T ss_dssp CCCTTSEEEEEEEESSCCCCBEEECSSSSTTSCCEEECCTTCSHHHHHHHHHHHHHHHHHHTCGGGTTTEEEEC---SSC
T ss_pred cccCCcceeeeccccCccccCcceeccCCCccCceeccccCCCHHHHHHHHHHHHHHHHHHcChhhhhcccccc---CCC
Confidence 11223556777788899999999999999999999999999999999999999999999999988877654432 454
Q ss_pred CCCCCCCCHHHHHHHHHHhCCcCcccccCcccCCCCCCCcccCCCCeeeccCCcEEeeccCCCCCCCCCChHHHHHHHHH
Q psy14643 703 CKQYEFESDDYWACTARQITATVHHMSGTCRMGINEDGTTVVDNELRVHGIKNLRVADASVMPILIAAHPMAPIYMIGEK 782 (801)
Q Consensus 703 ~~~~~~~~~~~~~~~~~~~~~~~~H~~GT~rMG~~~d~~~VVD~~~rV~G~~NL~V~DaSvfP~~~~~NPtlTi~AlA~R 782 (801)
. ..+++++++|++....+.+|++||||||. |++||||++|||||++|||||||||||+++++||++||||||||
T Consensus 442 ~----~~~~~~~~~~ir~~~~t~~H~~GTcrMG~--d~~sVVD~~~rV~Gv~nL~VvDaSv~P~~~~~np~~ti~aiAEk 515 (526)
T 3t37_A 442 T----PNSAAEMDDFIARSVITHHHPCGTCRMGK--DPDAVVDANLRLKALDNLFVVDASIMPNLTAGPIHAAVLAIAET 515 (526)
T ss_dssp C----CCSHHHHHHHHHHHEEECSCCBCTTCBCS--STTCSBCTTCBBTTCSSEEECSGGGCSSCCSSCCHHHHHHHHHH
T ss_pred C----CCCHHHHHHHHHhcCccCcccCccccCCC--CCCccCCCCCEEcCCCCeEEEEcCcccCCcChHHHHHHHHHHHH
Confidence 3 36889999999999999999999999994 45699999999999999999999999999999999999999999
Q ss_pred HHHHHHhh
Q psy14643 783 CADMIKDT 790 (801)
Q Consensus 783 ~Ad~I~~~ 790 (801)
+||+-...
T Consensus 516 aAd~~~~~ 523 (526)
T 3t37_A 516 FARQYHHH 523 (526)
T ss_dssp HHHHHHHS
T ss_pred HHHHhhcc
Confidence 99987543
No 7
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=100.00 E-value=4.7e-67 Score=603.60 Aligned_cols=446 Identities=23% Similarity=0.308 Sum_probs=327.7
Q ss_pred ccccc-cccccCccccccccccCCCCCc---cC-----------------------CcccccCcCcccccCCCeEEecCC
Q psy14643 257 ADMIK-DTWSQGENKLYANVTPDGIRRR---AD-----------------------SIQAEKQPGQCQAMVKQRCRWPRG 309 (801)
Q Consensus 257 a~~i~-~~~~~g~~v~A~rLse~g~~~~---~~-----------------------~y~~~~~~~~~~~~~~~~~~~~~g 309 (801)
.|+|+ ..++|| ||+|.|||| +.+++ .. .|.+.+|.+ +.++.+.+++|
T Consensus 27 yD~IIVGsG~AG-~v~A~rLse-g~~VlvLEaG~~~~~~~~~~~~~~~~~~~~~~~~~~t~~q~~----~~~~~~~~~rg 100 (536)
T 1ju2_A 27 YDYVIVGGGTSG-CPLAATLSE-KYKVLVLERGSLPTAYPNVLTADGFVYNLQQEDDGKTPVERF----VSEDGIDNVRG 100 (536)
T ss_dssp EEEEEECCSTTH-HHHHHHHTT-TSCEEEECSSBCGGGSGGGGBGGGHHHHHHSCCCSSSSEEEE----ECTTSCEEEEE
T ss_pred ccEEEECccHHH-HHHHHHHhc-CCcEEEEecCCCcCCCcceecchhHhhhccCCCcCcCCCccc----cCCCcceeecc
Confidence 56655 455677 999999999 77761 11 033444443 56777889999
Q ss_pred CccCchhHhcccEEecCChhhHHHHHHcCCCCCCccchHHHHHHhhcCCCCCCCCCCCCCCCCcEeeecCCCCChHHHHH
Q psy14643 310 KGMGGSSVLNYMIYTRGTPRDYDRWAAMGNPGWSYDEVYPYFLKIENMTIPELRNSPHHSTTGYVPVGYNPYKSQVVDAF 389 (801)
Q Consensus 310 ~~vGGsS~in~~~~~R~~~~df~~w~~~g~~~Ws~~~l~pyy~k~E~~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~ 389 (801)
++|||||.||+|+|+|+++.||+.+ | .+|+|++++|||+++|+.+... +...+....|
T Consensus 101 ~~lGGsS~in~~~~~R~~~~d~~~~---G-~~W~~~~~~p~~~~~e~~~~~~------------------~~~~~~~~~~ 158 (536)
T 1ju2_A 101 RVLGGTSIINAGVYARANTSIYSAS---G-VDWDMDLVNQTYEWVEDTIVYK------------------PNSQSWQSVT 158 (536)
T ss_dssp CBTTGGGGTSCCEECBCCTTSSTTS---S-SCCCHHHHHHHHHHHHHHHCBC------------------CCCCHHHHHH
T ss_pred eeccccccccCeEEEeCCHHHHhhc---c-CCCChHHHHHHHHhhhcccCCC------------------CCCCcHHHHH
Confidence 9999999999999999999999743 2 3599999999999999975421 1234667889
Q ss_pred HHHHHHcCCCCC-CCCCCCCcccce--eecccccCCeechhhHHhhccccCCCCeEEeeCceEEEEEeeCC-CCeEEEEE
Q psy14643 390 LESSKYVNQSTI-DYNQPENYLGFS--RIQATTRNGKRVSSYHAYIEPVRNRPNLHISLNSQVTRVLIDSE-SKKAYGVE 465 (801)
Q Consensus 390 ~~a~~~~G~~~~-~~~~~~~~~g~~--~~~~~~~~g~r~s~~~~~L~~~~~~~nl~v~~~a~V~rI~~d~~-~~~a~gV~ 465 (801)
.++++++|++.. ..+. ....|+. .+. .+.+|.|+++.. |+.. ++++|++|+++++|+||+++++ +++++||+
T Consensus 159 ~~a~~~~G~~~~~~~~~-~~~~g~~~g~~~-~~~~g~r~s~~~-~~~~-~~~~~~~v~~~~~v~~i~~~~~~~~~~~GV~ 234 (536)
T 1ju2_A 159 KTAFLEAGVHPNHGFSL-DHEEGTRITGST-FDNKGTRHAADE-LLNK-GNSNNLRVGVHASVEKIIFSNAPGLTATGVI 234 (536)
T ss_dssp HHHHHHTTCCCEEEECC-BCCSEEEECEES-BCTTSBBCCGGG-GGGG-SCTTTEEEEESCEEEEEEECCSSSCBEEEEE
T ss_pred HHHHHHcCCCCCCCccc-CCCCCceeeeEE-ECCCCeEecHHH-hhhh-hcCCCcEEEeCCEEEEEEECCCCCCEEEEEE
Confidence 999999998652 1111 1111211 111 136899999887 8754 5789999999999999999863 35899999
Q ss_pred EEE-CCEEEEEE--eeeEEEecCCCCCCHHHHHhhCCCChhhhhhCCCceeecCC-cccccccccccceEEEEeCCcccc
Q psy14643 466 FVK-NGKKRIVF--ARKEIILSAGAINTPHILMHSGVGPREHLESLKIKVERDLP-VGENLQDHITMAGLAFTHNTTELF 541 (801)
Q Consensus 466 ~~~-~g~~~~v~--A~k~VILaAGai~SprLLl~SGIG~~~~L~~~Gi~~v~~~p-VGrnl~dH~~~~~~~~~~~~~~~~ 541 (801)
+.. +|+.++++ ++|+||||||+++||+||++|||||+++|+++||++++|+| ||+|||||+.. .+.+..+.+..
T Consensus 235 ~~~~~g~~~~~~v~a~k~VILaaGa~~sp~lL~~SGig~~~~l~~~gi~~~~dlP~VG~NL~DH~~~-~~~~~~~~~~~- 312 (536)
T 1ju2_A 235 YRDSNGTPHQAFVRSKGEVIVSAGTIGTPQLLLLSGVGPESYLSSLNIPVVLSHPYVGQFLHDNPRN-FINILPPNPIE- 312 (536)
T ss_dssp EECTTSCEEEEEEEEEEEEEECCHHHHHHHHHHHTTEECHHHHHHTTCCCSEECTTTTEEEECCEEE-EEEECCSSCCC-
T ss_pred EEeCCCceEEEEeccCCEEEEcCcccCCHHHHHHcCCCCHHHHHhcCCceEecCcccccchhcCcce-eEEEEeCCCcc-
Confidence 985 67766664 66899999999999999999999999999999999999999 99999999985 56655543321
Q ss_pred chhhHHHHHHHHHhhccCCCCCCCCCccccEEEEEecC---CCCCCCCCCeeeeeeccccccCCccccccccCcchhhHh
Q psy14643 542 NYNTMLAQAFTMMYNISKGGGMGSIPGGVEGIGFVQTK---YNTDPSYPDIEFIFAIGSLAADSGHTVRRGMGITDECYN 618 (801)
Q Consensus 542 ~~~~~~~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~---~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 618 (801)
.+... ...... .|.... .. ...+.+. +.+ ..
T Consensus 313 -------------------~~~~~-~~~~~~-~~~~~~~g~~~--~~~~~~~--~~~----~~----------------- 346 (536)
T 1ju2_A 313 -------------------PTIVT-VLGISN-DFYQCSFSSLP--FTTPPFG--FFP----SS----------------- 346 (536)
T ss_dssp -------------------CCCCC-EEEECS-SEEEEEEEECC--CSSCCBT--TBS----SS-----------------
T ss_pred -------------------cccch-hhhHHH-HHHHcCCCCCC--CChhhhe--eec----Cc-----------------
Confidence 01000 000000 010000 00 0000000 000 00
Q ss_pred hhhhccCCCCeEEEeeeecccCCCceEEe-cCCCCCCCceeecCCCCChHHHHHHHHHHHHHHHHhcCccccccccccCC
Q psy14643 619 QAYKHLEQKNTWTIWPMLLLPKSRGRILL-GSRNPLKAPLLYGNYFQDESDLWTLVEGIKMAVNLSRTEPFQRIGSKLNP 697 (801)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~p~s~g~v~l-~~~d~~g~P~i~~~y~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 697 (801)
...........+...+.+|.|||+|+| +++||++.|.|+++|+.++.|++.+.++++.+++++++.+++.+.....
T Consensus 347 --~~~~~~~~~~~~~~~l~~P~SrG~V~L~~s~Dp~~~P~i~~~y~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~~- 423 (536)
T 1ju2_A 347 --SYPLPNSTFAHFASKVAGPLSYGSLTLKSSSNVRVSPNVKFNYYSNLTDLSHCVSGMKKIGELLSTDALKPYKVEDL- 423 (536)
T ss_dssp --CCCCCSSCEEEEEEEESSCSCCEEEECSCSSCTTSCCEECCCTTCSHHHHHHHHHHHHHHHHHHTSGGGGGGCSSCC-
T ss_pred --ccCCCCcceEEEeeecCCCCcceEEEeCCCCCcccCceecccccCCccHHHHHHHHHHHHHHHHcCccchhhhcccc-
Confidence 000111122344555679999999999 8899999999999999999999999999999999999998888764421
Q ss_pred CCCCCCCC------CCCCCHHHHHHHHHHhCCcCcccccCcccCCCCCCCcccCCCCeeeccCCcEEeeccCCCCCCCCC
Q psy14643 698 VPLPGCKQ------YEFESDDYWACTARQITATVHHMSGTCRMGINEDGTTVVDNELRVHGIKNLRVADASVMPILIAAH 771 (801)
Q Consensus 698 ~~~p~~~~------~~~~~~~~~~~~~~~~~~~~~H~~GT~rMG~~~d~~~VVD~~~rV~G~~NL~V~DaSvfP~~~~~N 771 (801)
...|++.. ....+|++|++|+|....+.+|++|||||| +|||++|||||++||||+|+||||+++++|
T Consensus 424 ~~~p~~~~~~~~~p~~~~~d~~~~~~ir~~~~t~~H~~GTcrMG------~VVD~~lrV~Gv~nLrVvDaSv~P~~~~~n 497 (536)
T 1ju2_A 424 PGVEGFNILGIPLPKDQTDDAAFETFCRESVASYWHYHGGCLVG------KVLDGDFRVTGINALRVVDGSTFPYTPASH 497 (536)
T ss_dssp STTCSCCBSSSCCCSCTTCHHHHHHHHHHHCEECSCCEESSCBT------TTBCTTSBBTTCBTEEECSGGGCSSCSSSS
T ss_pred ccCCCccccccCCCcccCCHHHHHHHHHhccCccccCcCccCCc------cEECCCCeEcCCCCeEEeecccCCCCCCcc
Confidence 11222110 024589999999999999999999999999 799999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHHHHhhh
Q psy14643 772 PMAPIYMIGEKCADMIKDTW 791 (801)
Q Consensus 772 PtlTi~AlA~R~Ad~I~~~~ 791 (801)
|++|+||||||+|+.|+++.
T Consensus 498 p~~t~~aiAer~A~~ii~~~ 517 (536)
T 1ju2_A 498 PQGFYLMLGRYVGIKILQER 517 (536)
T ss_dssp CHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhh
Confidence 99999999999887766443
No 8
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=100.00 E-value=4.1e-63 Score=574.80 Aligned_cols=432 Identities=23% Similarity=0.315 Sum_probs=323.8
Q ss_pred EEecCCCccCchhHhcccEEecCChhhHHH---HHHcCCCCCCccchHHHHHHhhcCCCCCCCCCCCCCCCCcEeeecCC
Q psy14643 304 CRWPRGKGMGGSSVLNYMIYTRGTPRDYDR---WAAMGNPGWSYDEVYPYFLKIENMTIPELRNSPHHSTTGYVPVGYNP 380 (801)
Q Consensus 304 ~~~~~g~~vGGsS~in~~~~~R~~~~df~~---w~~~g~~~Ws~~~l~pyy~k~E~~~~~~~~~~~~~g~~g~~~~~~~~ 380 (801)
+.+.+|++|||||.||+|+|+|+.+.||+. | +.+|+|++ |||+|+|...+. ...+..+|+ .
T Consensus 85 ~~~~~g~~lGGsS~in~~~~~r~~~~d~d~~~~W----~~~w~~~~--p~~~k~e~~~~~----~~~~~~~g~------~ 148 (546)
T 1kdg_A 85 ITVFAGCLVGGGTSVNGALYWYPNDGDFSSSVGW----PSSWTNHA--PYTSKLSSRLPS----TDHPSTDGQ------R 148 (546)
T ss_dssp BSSCCBCSTTGGGGTSCCBCCCCCGGGGCGGGTC----CGGGSCCH--HHHHHHHHHSCC----BSCCSTTSC------C
T ss_pred cccccceeecccccccceEEecCChHHhcCcccC----ccccCccc--HHHHHHHhcCCC----CccCCCCCC------c
Confidence 557899999999999999999999999987 8 46899988 999999997542 112233332 2
Q ss_pred CCChHHHHHHHHHHHcCCCCCCCC-CC-CCcccceeecccccCCeechhhHHhhccccCCCCeEEeeCceEEEEEeeCCC
Q psy14643 381 YKSQVVDAFLESSKYVNQSTIDYN-QP-ENYLGFSRIQATTRNGKRVSSYHAYIEPVRNRPNLHISLNSQVTRVLIDSES 458 (801)
Q Consensus 381 ~~~~~~~~~~~a~~~~G~~~~~~~-~~-~~~~g~~~~~~~~~~g~r~s~~~~~L~~~~~~~nl~v~~~a~V~rI~~d~~~ 458 (801)
+..+....|.++++++|++..+.+ +. ..+.|++.++++|.+|.|+|+..+||.++.+++|++|++++.|++|++++
T Consensus 149 ~~~~~~~~~~~a~~~~G~~~~~~~~~~~~~~~g~~~~~~~~~~g~R~s~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~-- 226 (546)
T 1kdg_A 149 YLEQSFNVVSQLLKGQGYNQATINDNPNYKDHVFGYSAFDFLNGKRAGPVATYLQTALARPNFTFKTNVMVSNVVRNG-- 226 (546)
T ss_dssp CSCHHHHHHHHHHHTTTCEECCGGGSTTCCTTEEEECCBCEETTEECHHHHTHHHHHHTCTTEEEECSCCEEEEEEET--
T ss_pred cCCHHHHHHHHHHHHCCCCcCCccCCcCCCCcEEeeeeeccCCCcccCHHHHHHHHHhhCCCcEEEeCCEEEEEEEeC--
Confidence 445777889999999999765432 10 24568888888999999999999999998888999999999999999975
Q ss_pred CeEEEEEEEE--CCE--EEEEEeeeEEEecCCCCCCHHHHHhhCCCChhhhhhC------CCcee-----ecCCcccccc
Q psy14643 459 KKAYGVEFVK--NGK--KRIVFARKEIILSAGAINTPHILMHSGVGPREHLESL------KIKVE-----RDLPVGENLQ 523 (801)
Q Consensus 459 ~~a~gV~~~~--~g~--~~~v~A~k~VILaAGai~SprLLl~SGIG~~~~L~~~------Gi~~v-----~~~pVGrnl~ 523 (801)
++++||++.. +|+ ..++.+.|+||||||+++||+||++|||||+++|+++ ||+++ +|+|||+|||
T Consensus 227 ~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~sp~lL~~sGig~~~~L~~~gn~s~~GI~v~~~~~~~dlpVG~nL~ 306 (546)
T 1kdg_A 227 SQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTSRILFQSGIGPTDMIQTVQSNPTAAAALPPQNQWINLPVGMNAQ 306 (546)
T ss_dssp TEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHHHHHHHHTTBSCHHHHHHHHTSHHHHHHSCCGGGCBCCCTTTTBB
T ss_pred CEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcCHHHHHHcCCCcHHHHHHhhccccCCcccccccccccCCcccCcc
Confidence 6899999975 354 3456666899999999999999999999999999999 69985 7999999999
Q ss_pred cccccceEEEEeCCcc-cc-ch-----hhHHHHHHHHHhhccCCCCCCCCCccccEEEEEecCCCCCCCCCCeeeeeecc
Q psy14643 524 DHITMAGLAFTHNTTE-LF-NY-----NTMLAQAFTMMYNISKGGGMGSIPGGVEGIGFVQTKYNTDPSYPDIEFIFAIG 596 (801)
Q Consensus 524 dH~~~~~~~~~~~~~~-~~-~~-----~~~~~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 596 (801)
||+.+ .+.+..+ .. .. .. ........+|+.. +.||+.. ..... .|+..........+.++..+.+.
T Consensus 307 DH~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 379 (546)
T 1kdg_A 307 DNPSI-NLVFTHP-SIDAYENWADVWSNPRPADAAQYLAN---QSGVFAG-ASPKL-NFWRAYSGSDGFTRYAQGTVRPG 379 (546)
T ss_dssp CCCCE-EEEEECT-TCCCGGGGTTTTTSCCHHHHHHHHHH---SCSGGGS-CSCCE-EEEEEEECTTSCEEEEEEEEEES
T ss_pred cCcce-eEEEecC-CcccccchhhhhcchhHHHHHHHHHc---CCccccc-CCcce-EEEEccCCCCcchhhhhheeccc
Confidence 99986 5666522 21 10 00 0111245667766 7888762 22222 34432111000111222222211
Q ss_pred ccccCCccccccccCcchhhHhhhhhccCCCCeEEEeeeeccc-CCCceEEecCCCCCCCceeecCCCCChHHHHHHHHH
Q psy14643 597 SLAADSGHTVRRGMGITDECYNQAYKHLEQKNTWTIWPMLLLP-KSRGRILLGSRNPLKAPLLYGNYFQDESDLWTLVEG 675 (801)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~s~g~v~l~~~d~~g~P~i~~~y~~~~~D~~~~~~~ 675 (801)
..... + .........+++...+.+| .|||+|+|++.| ..|.++++|+.++.|++.+.++
T Consensus 380 ~~~~~---------~---------~~~~~~~~~~~~~~~~~~p~~srG~v~L~s~~--~~~~i~~~y~~~~~D~~~~~~~ 439 (546)
T 1kdg_A 380 AASVN---------S---------SLPYNASQIFTITVYLSTGIQSRGRIGIDAAL--RGTVLTPPWLVNPVDKTVLLQA 439 (546)
T ss_dssp CSCCC---------C---------SSCCCGGGEEEEEEEECTTCCCCBEEEECTTC--CEEEEECCTTCSHHHHHHHHHH
T ss_pred ccccc---------c---------ccccCCCCeEEEEeeecCCCCCCceEecCCCC--CCCcccccccCCchHHHHHHHH
Confidence 00000 0 0001112346666677788 999999999877 5677888999999999999999
Q ss_pred HHHHHHHhcCccccccccccCCCCCCCCCCCCCCCHHHHHHHHHHhCCcCcccccCcccCCCCCCCcccCCCCeeeccCC
Q psy14643 676 IKMAVNLSRTEPFQRIGSKLNPVPLPGCKQYEFESDDYWACTARQITATVHHMSGTCRMGINEDGTTVVDNELRVHGIKN 755 (801)
Q Consensus 676 ~~~~~~i~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~H~~GT~rMG~~~d~~~VVD~~~rV~G~~N 755 (801)
++.+++++++.+.... ..|+. ..+++++.++++....+++|++||||||++++ +||||++|||||++|
T Consensus 440 ~~~~~~~~~~~~~~~~-------~~p~~----~~~~~~~~~~~~~~~~t~~H~~GTcrMG~~~~-~~VVD~~lrV~Gv~n 507 (546)
T 1kdg_A 440 LHDVVSNIGSIPGLTM-------ITPDV----TQTLEEYVDAYDPATMNSNHWVSSTTIGSSPQ-SAVVDSNVKVFGTNN 507 (546)
T ss_dssp HHHHTTTGGGSTTCEE-------EESCT----TSCHHHHHHHSCGGGGCCSCCBCTTCBCSCTT-TCSBCTTCBBTTCSS
T ss_pred HHHHHHHhcCCCcccc-------cCCCC----CCCHHHHHHHHHHhcCcccccccceecCCCCC-CeeECCCCeEccCCC
Confidence 9999999877542221 12332 35788888999888889999999999996543 699999999999999
Q ss_pred cEEeeccCCCCCCCCCChHHHHHHHHHHHHHHHhhhc
Q psy14643 756 LRVADASVMPILIAAHPMAPIYMIGEKCADMIKDTWS 792 (801)
Q Consensus 756 L~V~DaSvfP~~~~~NPtlTi~AlA~R~Ad~I~~~~~ 792 (801)
|||+|+||||+++++||++|+||||||+||+|++++.
T Consensus 508 LrVvDaSv~P~~~~~np~~ti~aiAeraAd~I~~~~~ 544 (546)
T 1kdg_A 508 LFIVDAGIIPHLPTGNPQGTLMSAAEQAAAKILALAG 544 (546)
T ss_dssp EEECSGGGCSSCCSSCSHHHHHHHHHHHHHHHHHSTT
T ss_pred cEEeEecccCCCCCccHHHHHHHHHHHHHHHHHhhcC
Confidence 9999999999999999999999999999999998764
No 9
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=100.00 E-value=2e-60 Score=545.44 Aligned_cols=386 Identities=17% Similarity=0.201 Sum_probs=287.4
Q ss_pred CCCeEEecCCCccCchhHhcccEEecCChhhHHHHHHcCCCCCCccchH-HHHHHhhcCCCCCCCCCCCCCCCCcEeeec
Q psy14643 300 VKQRCRWPRGKGMGGSSVLNYMIYTRGTPRDYDRWAAMGNPGWSYDEVY-PYFLKIENMTIPELRNSPHHSTTGYVPVGY 378 (801)
Q Consensus 300 ~~~~~~~~~g~~vGGsS~in~~~~~R~~~~df~~w~~~g~~~Ws~~~l~-pyy~k~E~~~~~~~~~~~~~g~~g~~~~~~ 378 (801)
.++.+.|++||+|||||+||+|+|+|+++.||+.|. ++|.|++|+ |||+|+|+++++...+.+.| ..
T Consensus 95 ~~~~~~~~rg~~lGGsS~in~~~~~R~~~~Dfd~w~----~~w~~~~l~~pyy~~~E~~~~~~~~~~~~~--------~~ 162 (504)
T 1n4w_A 95 NYDQMSVYVGRGVGGGSLVNGGMAVEPKRSYFEEIL----PRVDSSEMYDRYFPRANSMLRVNHIDTKWF--------ED 162 (504)
T ss_dssp ECSSCEEEEECSTTGGGGTSCCBCCCCCHHHHHHHC----TTSCHHHHHHTHHHHHHHHHTCBCCCHHHH--------HH
T ss_pred cCCceEEEEeeecchHHHhhCeEEEeCCHHHHHHhc----cccchhhhhhHHHHHHHHHhCCCCCCcccc--------cC
Confidence 677899999999999999999999999999999994 689999999 99999999876532111111 01
Q ss_pred CCCCChHHHHHHHHHHHcCC-----CC-CCCCC--------CCCcccceeecccccCCeechhhHHhhccccCCCCeEEe
Q psy14643 379 NPYKSQVVDAFLESSKYVNQ-----ST-IDYNQ--------PENYLGFSRIQATTRNGKRVSSYHAYIEPVRNRPNLHIS 444 (801)
Q Consensus 379 ~~~~~~~~~~~~~a~~~~G~-----~~-~~~~~--------~~~~~g~~~~~~~~~~g~r~s~~~~~L~~~~~~~nl~v~ 444 (801)
.+ ..+..+.|.++++++|+ +. .++|+ ...|..|+.|..+|++| |+++..+||.++.+++|++|+
T Consensus 163 ~~-~~p~~~~~~~a~~~~G~~~~~~p~~~d~n~~~~~g~g~~~~~~~~G~c~~g~~~g-r~s~~~~~l~~a~~~~n~~i~ 240 (504)
T 1n4w_A 163 TE-WYKFARVSREQAGKAGLGTVFVPNVYDFGYMQREAAGEVPKSALATEVIYGNNHG-KQSLDKTYLAAALGTGKVTIQ 240 (504)
T ss_dssp CG-GGHHHHHHHHHHHHTTCCEEECCBSBCHHHHHHHHTTSSCCSGGGTCSTTCCSSS-BCCTTTTHHHHHHHTTSEEEE
T ss_pred CC-cchHHHHHHHHHHHcCCCCccCCcccccCccccccCccccCCcccccccccCCCC-ccCHHHHHHHHHHhcCCcEEE
Confidence 11 24678899999999999 43 24331 12466788888899999 999999999988888999999
Q ss_pred eCceEEEEEeeCCCCeEEEEEEEE-CC---EEEEEEeeeEEEecCCCCCCHHHHHhhC-CCChhhhhhCCCceeecCCcc
Q psy14643 445 LNSQVTRVLIDSESKKAYGVEFVK-NG---KKRIVFARKEIILSAGAINTPHILMHSG-VGPREHLESLKIKVERDLPVG 519 (801)
Q Consensus 445 ~~a~V~rI~~d~~~~~a~gV~~~~-~g---~~~~v~A~k~VILaAGai~SprLLl~SG-IG~~~~L~~~Gi~~v~~~pVG 519 (801)
+++.|+||++++++++++||++.. +| +.++++|+ +||||||+++||+|||+|| || ||+++.+. ||
T Consensus 241 ~~~~V~~i~~~~~g~~~~gV~~~~~~g~~~~~~~v~A~-~VIlaaG~~~s~~lL~~Sg~ig--------~i~~~~~~-VG 310 (504)
T 1n4w_A 241 TLHQVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCR-YLFLGAGSLGSTELLVRARDTG--------TLPNLNSE-VG 310 (504)
T ss_dssp ESEEEEEEEECTTSSEEEEEEEECTTCCEEEEEEEEEE-EEEECSHHHHHHHHHHHHHHTT--------SSTTCCTT-TT
T ss_pred eCCEEEEEEECCCCCEEEEEEEeCCCCccceeEEEeeC-EEEEccCCCCCHHHHHhccccC--------CCCCCChh-hc
Confidence 999999999986556899999984 56 67889995 9999999999999999999 88 67766332 99
Q ss_pred cccccccccceEEEEeCCccccchhhHHHHHHHHHhhccCCCCCCCCCccccEEEEEecCCCCCCCCCCeeeeeeccccc
Q psy14643 520 ENLQDHITMAGLAFTHNTTELFNYNTMLAQAFTMMYNISKGGGMGSIPGGVEGIGFVQTKYNTDPSYPDIEFIFAIGSLA 599 (801)
Q Consensus 520 rnl~dH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 599 (801)
+||+||+.. .+.+.... .. ..|++. +......|..... ...|+++..+. ..
T Consensus 311 ~nl~dh~~~-~~~~~~~~-~~-------------------~~~~~~--~~~~~~~~~~~~~---~~~~~~~~~~~---~~ 361 (504)
T 1n4w_A 311 AGWGPNGNI-MTARANHM-WN-------------------PTGAHQ--SSIPALGIDAWDN---SDSSVFAEIAP---MP 361 (504)
T ss_dssp CCBBCTTCE-EEEEECCT-TC-------------------CCCSCC--CSSCCEEEEECCS---STTCEEEEEEC---CC
T ss_pred cccccCCcc-eeeeccCC-CC-------------------cccCcC--CCccEEEEeccCC---CCCceEEEecc---CC
Confidence 999999975 43332211 00 123332 1122234443321 12344332221 00
Q ss_pred cCCccccccccCcchhhHhhhhhccCCCCeEEEeeeecccCCCceEEecCCCCCCCceeecCCCCChHHHHHHHHHHH-H
Q psy14643 600 ADSGHTVRRGMGITDECYNQAYKHLEQKNTWTIWPMLLLPKSRGRILLGSRNPLKAPLLYGNYFQDESDLWTLVEGIK-M 678 (801)
Q Consensus 600 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~s~g~v~l~~~d~~g~P~i~~~y~~~~~D~~~~~~~~~-~ 678 (801)
. .+. ..++++..+.+|.++|+|+|++.|+ .|+++|+.++ | +.+.++++ .
T Consensus 362 ~----------------------~~~--~~~~~~~~~~~p~srG~V~L~s~~~----~i~~~~~~~~-D-~~~~~~~~~~ 411 (504)
T 1n4w_A 362 A----------------------GLE--TWVSLYLAITKNPQRGTFVYDAATD----RAKLNWTRDQ-N-APAVNAAKAL 411 (504)
T ss_dssp C----------------------SSC--CCEEEEEEEECCCCCBCEEEETTTT----EEEECCCGGG-G-HHHHHHHHHH
T ss_pred h----------------------HHH--hhhhhheeeeccCCCcEEEecCCCC----ceEeccCCCc-C-HHHHHHHHHH
Confidence 0 000 2345556677899999999998654 6899999999 8 77888888 8
Q ss_pred HHHHhcCccccccccccCCCCCCCCCCCCCCCHHHHHHHHHHhCCcCcccccCcccCCCCCCCcccCCCCeeeccCCcEE
Q psy14643 679 AVNLSRTEPFQRIGSKLNPVPLPGCKQYEFESDDYWACTARQITATVHHMSGTCRMGINEDGTTVVDNELRVHGIKNLRV 758 (801)
Q Consensus 679 ~~~i~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~H~~GT~rMG~~~d~~~VVD~~~rV~G~~NL~V 758 (801)
+++|+++.+. + ++.+. +.. + ++++ ...+.+|++|||||| +|||++|||||++||||
T Consensus 412 ~~~i~~~~~~--~---------~~~~~--~~~-~-~~~~---~~~~~~H~~GTcrMG------~VVD~~~rV~Gv~nLrV 467 (504)
T 1n4w_A 412 FDRINKANGT--I---------YRYDL--FGT-Q-LKAF---ADDFCYHPLGGCVLG------KATDDYGRVAGYKNLYV 467 (504)
T ss_dssp HHHHHHHHTC--C---------BCCSS--SSS-S-CCSE---ECSEESSCBCSSCTT------TTBCTTSBBTTCSSEEE
T ss_pred HHHHHhccCC--C---------cCCch--hhh-h-hhhh---ccCccccccCCceee------eEECCCCeEeccCCeEE
Confidence 8888766542 1 11000 000 0 0001 345789999999999 89999999999999999
Q ss_pred eeccCCCCCCCCCChHHHHHHHHHHHHHHHhhhc
Q psy14643 759 ADASVMPILIAAHPMAPIYMIGEKCADMIKDTWS 792 (801)
Q Consensus 759 ~DaSvfP~~~~~NPtlTi~AlA~R~Ad~I~~~~~ 792 (801)
+|+||||+++++||++||||||||+||+|++++.
T Consensus 468 vDaSv~P~~~~~np~~ti~aiAeraAd~I~~~~~ 501 (504)
T 1n4w_A 468 TDGSLIPGSVGVNPFVTITALAERNVERIIKQDV 501 (504)
T ss_dssp CSGGGSCSCCSSCSHHHHHHHHHHHHHHHHHHHC
T ss_pred eeccccCCCCCcChHHHHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999999999999998765
No 10
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=100.00 E-value=2.3e-59 Score=536.68 Aligned_cols=383 Identities=17% Similarity=0.179 Sum_probs=280.4
Q ss_pred CCCeEEecCCCccCchhHhcccEEecCChhhHHHHHHcCCCCCCccchH-HHHHHhhcCCCCCCCCCCCCCCCCcEeeec
Q psy14643 300 VKQRCRWPRGKGMGGSSVLNYMIYTRGTPRDYDRWAAMGNPGWSYDEVY-PYFLKIENMTIPELRNSPHHSTTGYVPVGY 378 (801)
Q Consensus 300 ~~~~~~~~~g~~vGGsS~in~~~~~R~~~~df~~w~~~g~~~Ws~~~l~-pyy~k~E~~~~~~~~~~~~~g~~g~~~~~~ 378 (801)
.++.+.|++||+|||||+||+|+|+|+++.||+.|. ++|.|++|+ |||+|+|+++++.... ... .
T Consensus 100 ~~~~~~~~rg~~lGGsS~in~~~~~R~~~~dfd~w~----~~w~~~~l~~pyy~~~E~~~~~~~~~-------~~~---~ 165 (507)
T 1coy_A 100 RFSGIKVYQGRGVGGGSLVNGGMAVTPKRNYFEEIL----PSVDSNEMYNKYFPRANTGLGVNNID-------QAW---F 165 (507)
T ss_dssp ECSSCEEEEECSTTGGGGTSCCBCCCCCHHHHHHHC----TTSCHHHHHHTHHHHHHHHHTCBCCC-------HHH---H
T ss_pred cCCCeEEEEecccchHHHhhCeEEeeCCHHHHHhhC----CccchhcchhHHHHHHHHHhCCCCCC-------Ccc---c
Confidence 578889999999999999999999999999999994 579999999 9999999998753210 000 0
Q ss_pred CCC-CChHHHHHHHHHHHcCC-----CCC-CCCC--------CCCcccceeecccccCCeechhhHHhhccccCCCCeEE
Q psy14643 379 NPY-KSQVVDAFLESSKYVNQ-----STI-DYNQ--------PENYLGFSRIQATTRNGKRVSSYHAYIEPVRNRPNLHI 443 (801)
Q Consensus 379 ~~~-~~~~~~~~~~a~~~~G~-----~~~-~~~~--------~~~~~g~~~~~~~~~~g~r~s~~~~~L~~~~~~~nl~v 443 (801)
+.. ..++.+.|.++++++|+ +.. ++|+ ...|..|+.|..+|.+| |+|+..+||.++.+++|++|
T Consensus 166 ~~~~~~~~~~~~~~a~~~~G~~~~~~p~~~d~n~~~~~g~~~~~~~~~~g~C~~gc~~g-R~s~~~~~l~~a~~~~n~~i 244 (507)
T 1coy_A 166 ESTEWYKFARTGRKTAQRSGFTTAFVPNVYDFEYMKKEAAGQVTKSGLGGEVIYGNNAG-KKSLDKTYLAQAAATGKLTI 244 (507)
T ss_dssp HHCGGGHHHHHHHHHHHHTTCCEEECCBSBCHHHHHHHHTTCSCCSTTTTCSTTCCSSS-BCCTTTTHHHHHHHTTCEEE
T ss_pred cccccchHHHHHHHHHHHcCCCCccCCcccccCcccccCCCcccCccccccccccCCCC-CcChHHHHHHHHHhcCCcEE
Confidence 111 25778899999999999 442 4321 12456788888999999 99999999999888899999
Q ss_pred eeCceEEEEEeeCCCCeEEEEEEEE-CC---EEEEEEeeeEEEecCCCCCCHHHHHhhC-CCChhhhhhCCCceeecC-C
Q psy14643 444 SLNSQVTRVLIDSESKKAYGVEFVK-NG---KKRIVFARKEIILSAGAINTPHILMHSG-VGPREHLESLKIKVERDL-P 517 (801)
Q Consensus 444 ~~~a~V~rI~~d~~~~~a~gV~~~~-~g---~~~~v~A~k~VILaAGai~SprLLl~SG-IG~~~~L~~~Gi~~v~~~-p 517 (801)
++++.|++|++++++++++||++.. +| +.++++|+ +||||||+|+||+|||+|| ||. +| ++ +
T Consensus 245 ~~~~~v~~i~~~~~g~~~~gV~~~~~~g~~~~~~~~~A~-~VIlaaGa~~sp~lL~~Sg~iG~--------lp---nl~d 312 (507)
T 1coy_A 245 TTLHRVTKVAPATGSGYSVTMEQIDEQGNVVATKVVTAD-RVFFAAGSVGTSKLLVSMKAQGH--------LP---NLSS 312 (507)
T ss_dssp ECSEEEEEEEECSSSSEEEEEEEECTTSCEEEEEEEEEE-EEEECSHHHHHHHHHHHHHHTTS--------ST---TSCT
T ss_pred EeCCEEEEEEECCCCCEEEEEEEeCCCCcccccEEEEeC-EEEEccCccCCHHHHHhcccCCC--------CC---ccCh
Confidence 9999999999987545899999985 56 47889995 9999999999999999999 982 33 33 3
Q ss_pred -cccccccccccceEEEEeCCccccchhhHHHHHHHHHhhccCCCCCCCCCccccEEEEEecCCCCCCCCCCeeeeeecc
Q psy14643 518 -VGENLQDHITMAGLAFTHNTTELFNYNTMLAQAFTMMYNISKGGGMGSIPGGVEGIGFVQTKYNTDPSYPDIEFIFAIG 596 (801)
Q Consensus 518 -VGrnl~dH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 596 (801)
||+||+||+.. ......... . ..|++.. ... ...+..... ...|+++..+.
T Consensus 313 ~VG~~l~~h~~~-~~~~~~~~~-----------------~---~~~~~~~-~~~-~~~~~~~~~---~~~~~~~~~~~-- 364 (507)
T 1coy_A 313 QVGEGWGNNGNI-MVGRANHMW-----------------D---ATGSKQA-TIP-TMGIDNWAD---PTAPIFAEIAP-- 364 (507)
T ss_dssp TTTCCBBCTTEE-EEEEECCTT-----------------S---CCCSCCC-SSC-CEEEECTTC---TTSCEEEEEEC--
T ss_pred hhCCccccCCcc-ccccccccc-----------------c---cccccCC-Ccc-eEEEeccCC---CCCCcEEEecc--
Confidence 99999999964 222111000 1 3344331 111 112211111 12344333220
Q ss_pred ccccCCccccccccCcchhhHhhhhhccCCCCeEEEeeeecccCCCceEEecCCCCCCCceeecCCCCChHHHHHHHHHH
Q psy14643 597 SLAADSGHTVRRGMGITDECYNQAYKHLEQKNTWTIWPMLLLPKSRGRILLGSRNPLKAPLLYGNYFQDESDLWTLVEGI 676 (801)
Q Consensus 597 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~s~g~v~l~~~d~~g~P~i~~~y~~~~~D~~~~~~~~ 676 (801)
. .. . + ...++++..+.+|.++|+|+|+++|+ .|+++|+.++ | +.+.+++
T Consensus 365 -~--~~--------~---------~-----~~~~~~~~~~~~p~s~G~V~L~s~~~----~i~~~~~~~~-D-~~~~~~~ 413 (507)
T 1coy_A 365 -L--PA--------G---------L-----ETYVSLYLAITKNPERARFQFNSGTG----KVDLTWAQSQ-N-QKGIDMA 413 (507)
T ss_dssp -C--CC--------S---------S-----CCCEEEEEEEECCCCCBCEEEETTTT----EEEECCCGGG-G-HHHHHHH
T ss_pred -C--CH--------H---------H-----hhheeeeEEEeeeCCCcEEEEccCCC----ceeeccCCCC-c-HHHHHHH
Confidence 0 00 0 0 02344555667899999999998654 8999999999 8 5677777
Q ss_pred H-HHHHHhcCccccccccccCCCCCCCCCCCCCCCHHHHHHHHHHhCCcCcccccCcccCCCCCCCcccCCCCeeeccCC
Q psy14643 677 K-MAVNLSRTEPFQRIGSKLNPVPLPGCKQYEFESDDYWACTARQITATVHHMSGTCRMGINEDGTTVVDNELRVHGIKN 755 (801)
Q Consensus 677 ~-~~~~i~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~H~~GT~rMG~~~d~~~VVD~~~rV~G~~N 755 (801)
+ .+++++++.+. +. ..+. +.+++ ++| ...+++|++|||||| +|||++|||||++|
T Consensus 414 ~~~~~~i~~~~~~--~~----~~~~-------~~~d~--~~~---~~~~~~H~~GTcrMG------~VVD~~~rV~Gv~n 469 (507)
T 1coy_A 414 KKVFDKINQKEGT--IY----RTDL-------FGVYY--KTW---GDDFTYHPLGGVLLN------KATDNFGRLPEYPG 469 (507)
T ss_dssp HHHHHHHHHHHTC--CB----CSSC-------C--CC--CSS---BCSEESCCBCSSCTT------TTSCTTSBCTTSTT
T ss_pred HHHHHHHHhhcCC--cc----cCcc-------cccch--hhh---cccccccccCCcchh------heECCCCeEeccCC
Confidence 7 88888776541 11 1111 11111 112 345789999999999 69999999999999
Q ss_pred cEEeeccCCCCCCCCCChHHHHHHHHHHHHHHHhhhc
Q psy14643 756 LRVADASVMPILIAAHPMAPIYMIGEKCADMIKDTWS 792 (801)
Q Consensus 756 L~V~DaSvfP~~~~~NPtlTi~AlA~R~Ad~I~~~~~ 792 (801)
|||+|+||||+++++||++||||||||+||+|+++..
T Consensus 470 LrVvDaSv~P~~~~~Np~~ti~alAeraAd~I~~~~~ 506 (507)
T 1coy_A 470 LYVVDGSLVPGNVGVNPFVTITALAERNMDKIISSDI 506 (507)
T ss_dssp EEECSGGGSCSCCSSCSHHHHHHHHHHHHHHHHHHTC
T ss_pred eEEeechhccCCCCcChHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999997653
No 11
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=100.00 E-value=1.2e-42 Score=405.85 Aligned_cols=420 Identities=17% Similarity=0.144 Sum_probs=272.4
Q ss_pred CCCccCchhHhcccEEecCChhhHHHHHHcCCCCC---CccchHHHHHHhhcCCCCCCCCCCCCCCCCcEeeecCCCCCh
Q psy14643 308 RGKGMGGSSVLNYMIYTRGTPRDYDRWAAMGNPGW---SYDEVYPYFLKIENMTIPELRNSPHHSTTGYVPVGYNPYKSQ 384 (801)
Q Consensus 308 ~g~~vGGsS~in~~~~~R~~~~df~~w~~~g~~~W---s~~~l~pyy~k~E~~~~~~~~~~~~~g~~g~~~~~~~~~~~~ 384 (801)
.+..+||.+.+|.+...|..+.+ .+.. ..+| .+++++++|++.|..++.+. . .+..+
T Consensus 157 ~~~~vGG~~~~~~g~~~r~~~~e--~~~~--l~~~~v~~~~~l~~~~~~~~~l~~vgg--~--------------~~~~~ 216 (623)
T 3pl8_A 157 VTRVVGGMSTAWTCATPRFDREQ--RPLL--VKDDADADDAEWDRLYTKAESYFQTGT--D--------------QFKES 216 (623)
T ss_dssp ECCSTTGGGGTCCCBCCCCCGGG--SCCS--STTCHHHHHHHHHHHHHHHHHHHTEES--C--------------TTTTC
T ss_pred ccccccCcceeeccccccCChHH--hhhh--hcccCccChhhHHHHHHHHHHhccccc--c--------------cccCc
Confidence 57789999999999999988753 1111 2233 56888999999998865321 0 01111
Q ss_pred HHH-HHHHHHHHcCCCCCCCCCCCCcccceeecccccCCeechhhHHhhccc------cCCCCeEEeeCceEEEEEeeCC
Q psy14643 385 VVD-AFLESSKYVNQSTIDYNQPENYLGFSRIQATTRNGKRVSSYHAYIEPV------RNRPNLHISLNSQVTRVLIDSE 457 (801)
Q Consensus 385 ~~~-~~~~a~~~~G~~~~~~~~~~~~~g~~~~~~~~~~g~r~s~~~~~L~~~------~~~~nl~v~~~a~V~rI~~d~~ 457 (801)
... ...............+.. ....... ......|+++..++|.++ .+++|++|++++.|++|+++++
T Consensus 217 ~~~~~~~~~l~~~~~~~~~~~~--~p~a~~~---~~~~~~r~s~~~~~l~~~~~l~~~~~~~nv~v~~~~~V~~i~~~~~ 291 (623)
T 3pl8_A 217 IRHNLVLNKLTEEYKGQRDFQQ--IPLAATR---RSPTFVEWSSANTVFDLQNRPNTDAPEERFNLFPAVACERVVRNAL 291 (623)
T ss_dssp HHHHHHHHHHHHHTTTTSCCEE--CCEEEEE---EETTEEEECCHHHHCCCCCEEETTEEEEEEEEECSEEEEEEEECTT
T ss_pred cccccchHHHHHhhhhcccccc--cchhhcc---CCCCccccchHHhhhhhhhcchhhccCCCEEEEeCCEEEEEEEECC
Confidence 111 111122111110000000 0000000 112456889999999887 6778999999999999999876
Q ss_pred CCeEEEEEEEE--CCEEEEEEeeeEEEecCCCCCCHHHHHhhCCCChhhhhhCCCceeecCC-cccccccccccceEEEE
Q psy14643 458 SKKAYGVEFVK--NGKKRIVFARKEIILSAGAINTPHILMHSGVGPREHLESLKIKVERDLP-VGENLQDHITMAGLAFT 534 (801)
Q Consensus 458 ~~~a~gV~~~~--~g~~~~v~A~k~VILaAGai~SprLLl~SGIG~~~~L~~~Gi~~v~~~p-VGrnl~dH~~~~~~~~~ 534 (801)
+++++||++.. +|+.+++.|+ +||||+|++.||+||++||||++.+|+.+||++ |+| ||+||+||+.. .+.+.
T Consensus 292 ~~~v~GV~~~~~~~g~~~~i~A~-~VIlaaG~~~s~~lL~~sgiG~~~~l~~~~i~~--~l~~vG~nl~dh~~~-~~~~~ 367 (623)
T 3pl8_A 292 NSEIESLHIHDLISGDRFEIKAD-VYVLTAGAVHNTQLLVNSGFGQLGRPNPANPPE--LLPSLGSYITEQSLV-FCQTV 367 (623)
T ss_dssp SSCEEEEEEEETTTCCEEEECEE-EEEECSCTTHHHHHHHTTTSSCCSSCCTTSCCS--SCTTTTBSCBCCCEE-EEEEE
T ss_pred CCEEEEEEEEEcCCCcEEEEECC-EEEEcCCCcCCHHHHHhcCCCccccccccCCCC--CCcccccchhhCcCc-eEEEE
Confidence 56999999985 6888899995 999999999999999999999999999999999 999 99999999986 77777
Q ss_pred eCCcccc-----------ch------------------hhHHHHHHHHHhhccCCCCCCCCCccccEEEEEecCCCCCCC
Q psy14643 535 HNTTELF-----------NY------------------NTMLAQAFTMMYNISKGGGMGSIPGGVEGIGFVQTKYNTDPS 585 (801)
Q Consensus 535 ~~~~~~~-----------~~------------------~~~~~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~ 585 (801)
+++.... .. ..+...+.+++.+. ..+|+... ..+.......++. ..
T Consensus 368 ~~~~~~~~~~~~~~~~g~~g~~~~~~~~~~~~p~~~~~p~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~--~~ 442 (623)
T 3pl8_A 368 MSTELIDSVKSDMTIRGTPGELTYSVTYTPGASTNKHPDWWNEKVKNHMMQH--QEDPLPIP-FEDPEPQVTTLFQ--PS 442 (623)
T ss_dssp ECHHHHHHHTTTCEEESCTTSTTCEEECCTTCTTCSSCHHHHHHHHHHHHHC--TTCCCSSC-TTCCCCEEECCCB--TT
T ss_pred ECCcccccccccccccccCCCcceecccccCcccccCCchhhhhhhhhhhcc--cccccccc-ccccccccccccc--cc
Confidence 7653100 00 00011222222220 13333210 0000000000000 00
Q ss_pred CCCeeeeeeccccccCCccccccccCcchhhHhhhhhccCCCCeE-EEeeeecccCCCceEEecC--CCCCCCceeecCC
Q psy14643 586 YPDIEFIFAIGSLAADSGHTVRRGMGITDECYNQAYKHLEQKNTW-TIWPMLLLPKSRGRILLGS--RNPLKAPLLYGNY 662 (801)
Q Consensus 586 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~s~g~v~l~~--~d~~g~P~i~~~y 662 (801)
+| ++.......+. .+ .+.. .+...-.+ ........|.++|+|+|++ +|++|.|+++++|
T Consensus 443 ~~-~~~~~~~~~~~--~~-------~~~~--------~~~~~~~~~~~~~~e~~p~~~n~v~L~~~~~D~~g~P~~~~~~ 504 (623)
T 3pl8_A 443 HP-WHTQIHRDAFS--YG-------AVQQ--------SIDSRLIVDWRFFGRTEPKEENKLWFSDKITDAYNMPQPTFDF 504 (623)
T ss_dssp BC-EEEEEECCSCC--CS-------CCCC--------SSCGGGEEEEEEEECCCCCTTCEEEEEEEEECTTSSEEEEEEC
T ss_pred Cc-chhhhhhhhcc--cc-------cccc--------ccccceEEEEEEEEeeccCCCCEEEECCCCcCCCCCceEEEEE
Confidence 11 00000000000 00 0000 00000112 2234567899999999987 8999999999999
Q ss_pred CCChH-HHHHHHHHHHHHHHHhcCccccccccccCCCCCCCCCCCCCCCHHHHHHHHHHhCCcCcccccCcccCCCCCCC
Q psy14643 663 FQDES-DLWTLVEGIKMAVNLSRTEPFQRIGSKLNPVPLPGCKQYEFESDDYWACTARQITATVHHMSGTCRMGINEDGT 741 (801)
Q Consensus 663 ~~~~~-D~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~H~~GT~rMG~~~d~~ 741 (801)
..++. |++.+.++++.+.++++..+....+.. +. +. ...+++|++||||||.++..+
T Consensus 505 ~~~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~~------~~-----~~-----------~~~~~~H~~gt~~mg~~~~~~ 562 (623)
T 3pl8_A 505 RFPAGRTSKEAEDMMTDMCVMSAKIGGFLPGSL------PQ-----FM-----------EPGLVLHLGGTHRMGFDEKED 562 (623)
T ss_dssp CCCTTHHHHHHHHHHHHHHHHHTTTEEECTTSC------SE-----EC-----------CTTTTCCCBCTTCBCSSTTTT
T ss_pred eCCcHHHHHHHHHHHHHHHHHHHhcCCcccCch------hh-----cc-----------CCCCcccCCCceeCCCCCCCC
Confidence 99999 999999999999999876543322110 00 00 013689999999999652227
Q ss_pred ccc-CCCCeeeccCCcEEeeccCCCCCCCCCChHHHHHHHHHHHHHHHhhhccCCCccccC
Q psy14643 742 TVV-DNELRVHGIKNLRVADASVMPILIAAHPMAPIYMIGEKCADMIKDTWSQGENKVEIR 801 (801)
Q Consensus 742 ~VV-D~~~rV~G~~NL~V~DaSvfP~~~~~NPtlTi~AlA~R~Ad~I~~~~~~~~~~~~~~ 801 (801)
||| |++|||||++||||+|+|+||+++++||++||||||+|+||+|++++++++.+.|.|
T Consensus 563 ~vvvd~~~~~~~~~~l~v~d~s~~p~~~~~np~~t~~a~a~r~a~~i~~~~~~~~~~~~~~ 623 (623)
T 3pl8_A 563 NCCVNTDSRVFGFKNLFLGGCGNIPTAYGANPTLTAMSLAIKSCEYIKQNFTPSPFTSEAQ 623 (623)
T ss_dssp TCSBCTTCBBTTCSSEEECSGGGCCSCCCSCCHHHHHHHHHHHHHHHHHHCCCCCC-----
T ss_pred eeEECCCCCEecCCCeEEecCCccCCCCCcChHHHHHHHHHHHHHHHHHHhhcCCCCcccC
Confidence 998 999999999999999999999999999999999999999999999999888777653
No 12
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=100.00 E-value=9.5e-42 Score=392.23 Aligned_cols=235 Identities=23% Similarity=0.363 Sum_probs=192.3
Q ss_pred ccEEEecCccccc---cchHHHHHHHHHHHHcCCCCcccCccceeEEEEeecCCC-----------CCCCCCcEEEeeec
Q psy14643 3 GLAFTHNTTELFN---YNTMLAQAFTMMYNISKGGGMGSIPGGVEGIGFVQTKYN-----------TDPSYPDIEFIFAI 68 (801)
Q Consensus 3 ~~~~~~~~~~~~~---~~~~~~~~~~~~y~~~~~G~l~~~~~~~~~~~f~~~~~~-----------~~~~~pd~~~~~~~ 68 (801)
++.|.++.+.... .++......+.+|+.+++|||++ +..+.++|+++... .....||+|++|.+
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~l~~--~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~pd~~~~~~~ 394 (566)
T 3fim_B 317 PAAFFVNSNQTFDNIFRDSSEFNVDLDQWTNTRTGPLTA--LIANHLAWLRLPSNSSIFQTFPDPAAGPNSAHWETIFSN 394 (566)
T ss_dssp CCEEEESCSCSSGGGGTCHHHHHHHHHHHHHHSCSGGGC--CSCSEEEEECCCTTCGGGGTSCCCSSSTTSCSEEEEEES
T ss_pred eEEEEeCCCcccchhhcChHHHHHHHHHHHhcCCCCccc--ChhhheeeeccccchhhhhhhccccccCCCCCEEEEecc
Confidence 3567666543221 23444455678999999999987 46789999987521 12267999998876
Q ss_pred cccccCCCcccccccCcchhhhhhhhcccCCCCeEEEEEeccccCCeeEEEccCCCCCCCceeecCCCCChhhHHHHHHH
Q psy14643 69 GSLAADSGHTVRRGMGITDECYNQAYKHLEQKNTWTIWPMLLLPKSRGRILLGSRNPLKAPLLYGNYFQDESDLWTLVEG 148 (801)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~P~srG~v~l~s~dp~~~P~i~~~y~~~~~D~~~~~~~ 148 (801)
..+... +......+++++.+++++|+|||+|+|+|+||++.|+|++|||++|.|++.|+++
T Consensus 395 ~~~~~~-------------------~~~~~~~~~~~~~~~l~~P~SrG~V~L~s~dp~~~P~i~~~yl~~~~D~~~~~~~ 455 (566)
T 3fim_B 395 QWFHPA-------------------IPRPDTGSFMSVTNALISPVARGDIKLATSNPFDKPLINPQYLSTEFDIFTMIQA 455 (566)
T ss_dssp SCCCTT-------------------SCCCSSCCEEEEEEEESSCSCCBEEECSSSCTTSCCEEECCTTCSHHHHHHHHHH
T ss_pred cchhhc-------------------ccCCCCCCEEEEEEeecCCccceEEEecCCCCCCCceeccccCCCccHHHHHHHH
Confidence 432110 0011234689999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccccccccccCCCCCCCCCCCCCCCCHHHHHHHhhhccccccccccccccCcCCCCCcccCCCccccccCC
Q psy14643 149 IKMAVNLSRTEPFQRIGSKLNPVPLPGCKQYEFESDDYWACTARQITATVHHMSGTCRMGINEDGTTVVDNELRVHGIKN 228 (801)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~H~~GT~~Mg~~~~~~~VVD~~lrV~gv~~ 228 (801)
+|++++++++++++.+...+. .|++ ..+.+|++|++|||+...+.||++||||||++++.++|||++||||||+|
T Consensus 456 ~~~~~~i~~~~~~~~~~~~~~---~P~~--~~~~sd~~~~~~ir~~~~t~~H~~GTc~Mg~~~~~~~VVD~~lrV~Gv~~ 530 (566)
T 3fim_B 456 VKSNLRFLSGQAWADFVIRPF---DPRL--RDPTDDAAIESYIRDNANTIFHPVGTASMSPRGASWGVVDPDLKVKGVDG 530 (566)
T ss_dssp HHHHHHHHTSGGGTTTEEEES---SGGG--SCTTCHHHHHHHHHHHCEECSCCBCTTCBCCTTCSSCSBCTTCBBTTCBS
T ss_pred HHHHHHHHhCcccCCcccccc---CCCc--ccccchHHHHHHHhhcccccccccCccccCCcccCCccCCCCCeEccCCC
Confidence 999999999999998865432 3331 24579999999999999999999999999997765599999999999999
Q ss_pred ceEeecccccccccccccccEEEeecccccccccc
Q psy14643 229 LRVADASVMPILIAAHPMAPIYMIGEKCADMIKDT 263 (801)
Q Consensus 229 LrV~DaSv~P~~~~~n~~~~~~~i~~~~a~~i~~~ 263 (801)
||||||||||+++++||++|+||||||+||+|+++
T Consensus 531 LrVvDaSv~P~~~~~n~~~~~~~iaekaAd~I~~~ 565 (566)
T 3fim_B 531 LRIVDGSILPFAPNAHTQGPIYLVGKQGADLIKAD 565 (566)
T ss_dssp EEECSGGGCCSCCSSCTHHHHHHHHHHHHHHHHHT
T ss_pred cEEcccccCCCCCCcCcHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999875
No 13
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=100.00 E-value=1.2e-40 Score=383.97 Aligned_cols=237 Identities=29% Similarity=0.389 Sum_probs=191.0
Q ss_pred cEEEecCcccc----ccchHHHHHHHHHHHHcCCCCcccCccceeEEEEeecCC-------------------C-CCCCC
Q psy14643 4 LAFTHNTTELF----NYNTMLAQAFTMMYNISKGGGMGSIPGGVEGIGFVQTKY-------------------N-TDPSY 59 (801)
Q Consensus 4 ~~~~~~~~~~~----~~~~~~~~~~~~~y~~~~~G~l~~~~~~~~~~~f~~~~~-------------------~-~~~~~ 59 (801)
+.|.++.+... ..+.........+|..+++||+++ +..+.++|+++.. . ....+
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~Gpl~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (577)
T 3q9t_A 312 FVLRVKDGFGMDDVLLRHGPKRDAVVSAYNKNRSGPVGS--GLLELVGFPRIDKYLEKDAEYRKAKAANGGKDPFSPLGQ 389 (577)
T ss_dssp EEEEECTTSSSHHHHTSCSHHHHHHHHHHHHHSCSGGGC--CSEEEEEECCCHHHHTTCHHHHHHHHHTTTSCSSCTTSC
T ss_pred EEEEeCCCCccchhhhcchhHHHHHHHHHHhcCCCCccc--chhheeEEeecChhhhcchhhhhhhhccccccccCCCCC
Confidence 45656543221 123334556678999999999987 5778999987531 0 12267
Q ss_pred CcEEEeeeccccccCCCcccccccCcchhhhhhhhcccCCCCeEEEEEeccccCCee-EEEccCCCCCCCceeecCCCCC
Q psy14643 60 PDIEFIFAIGSLAADSGHTVRRGMGITDECYNQAYKHLEQKNTWTIWPMLLLPKSRG-RILLGSRNPLKAPLLYGNYFQD 138 (801)
Q Consensus 60 pd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~P~srG-~v~l~s~dp~~~P~i~~~y~~~ 138 (801)
|++|++|.+........ .+......+++++.+++++|+||| +|+|+|+||++.|+|+||||++
T Consensus 390 p~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~l~~P~SrGG~V~L~S~dp~~~P~i~p~yl~~ 453 (577)
T 3q9t_A 390 PHFELDFVCMFGTAFQW----------------HFPTPKTGDHLTVVVDLVRPISDPGEVTLNSADPFQQPNINLNFFAN 453 (577)
T ss_dssp CSEEEEEESSCCGGGCS----------------SSCCCSSSEEEEEEEEESSCCSCCEEEECSCSCTTSCCEEECCTTCS
T ss_pred ceEEEEecccccccccc----------------cccCCCCCCEEEEEEEeeeccccCCEEEeCCCCCCCCceEecCcCCC
Confidence 99999887642110000 000112346799999999999999 9999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHH-hccccccccccCCCCCCCCCCCCCCCCHHHHHHHhhhccccccccccccccCcCCCCCccc
Q psy14643 139 ESDLWTLVEGIKMAVNLS-RTEPFQRIGSKLNPVPLPGCKQYEFESDDYWACTARQITATVHHMSGTCRMGINEDGTTVV 217 (801)
Q Consensus 139 ~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~H~~GT~~Mg~~~~~~~VV 217 (801)
|.|+++|++++|++++++ ++++++++...+. .|+ ..+.+|++|+||||+...+.||++||||||++++ +|||
T Consensus 454 ~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~e~---~p~---~~~~sd~~~~~~ir~~~~t~~H~~GTc~Mg~~~~-~~VV 526 (577)
T 3q9t_A 454 DLDIIAMREGIRFSYDLLFKGEGFKDLVESEY---PWE---MPLDSDKEMHRAVLDRCQTAFHPTGTARLSKNID-QGVV 526 (577)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSTTGGGTEEEEE---SSC---CCTTCHHHHHHHHHHHCEECSCCBCTTCBCSSTT-TCSB
T ss_pred ccHHHHHHHHHHHHHHHHHhChhhhhcccccc---CCC---CCcCCHHHHHHHHHhccccccccccceecCCCCC-CceE
Confidence 999999999999999999 8999998875532 233 2357999999999999999999999999999765 7999
Q ss_pred CCCccccccCCceEeecccccccccccccccEEEeecccccccccccc
Q psy14643 218 DNELRVHGIKNLRVADASVMPILIAAHPMAPIYMIGEKCADMIKDTWS 265 (801)
Q Consensus 218 D~~lrV~gv~~LrV~DaSv~P~~~~~n~~~~~~~i~~~~a~~i~~~~~ 265 (801)
|++||||||+|||||||||||+++++||++|+||||||+||+|+++|.
T Consensus 527 D~~lrV~Gv~~LrVvDaSv~P~~~~~n~~a~~~~iaekaAd~I~~~~~ 574 (577)
T 3q9t_A 527 DPKLKVHGIKKLRVADASVIPIIPDCRIQNSVYAVGEKCADMIKAEHK 574 (577)
T ss_dssp CTTCBBTTCBSEEECSGGGCSSCCSSCCHHHHHHHHHHHHHHHHHHCT
T ss_pred CCCCeEeCCCCcEEeecccccCCCCCccHHHHHHHHHHHHHHHHhhhh
Confidence 999999999999999999999999999999999999999999998763
No 14
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=100.00 E-value=1.5e-36 Score=349.28 Aligned_cols=160 Identities=27% Similarity=0.330 Sum_probs=145.2
Q ss_pred eEEEEEeccccCCeeEEEccCCCCCCCcee-ecCCCCChhhHHHHHHHHHHHHHHHhccccccccccCCCCCCCCCCCCC
Q psy14643 102 TWTIWPMLLLPKSRGRILLGSRNPLKAPLL-YGNYFQDESDLWTLVEGIKMAVNLSRTEPFQRIGSKLNPVPLPGCKQYE 180 (801)
Q Consensus 102 ~~~~~~~l~~P~srG~v~l~s~dp~~~P~i-~~~y~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 180 (801)
.+++..++++|+|||+|+|+|+||++.|+| ++|||++|.|+++|++++|++++++++++++.+... +..|+|....
T Consensus 420 ~~~~~~~~~~P~SrG~v~l~s~dp~~~P~i~~~~yl~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~---~~~pg~~~~~ 496 (583)
T 3qvp_A 420 VASFDVWDLLPFTRGYVHILDKDPYLHHFAYDPQYFLNELDLLGQAAATQLARNISNSGAMQTYFAG---ETIPGDNLAY 496 (583)
T ss_dssp SEEEEEEESSCCCCBEEEESSSCGGGCCEEEECCTTCSHHHHHHHHHHHHHHHHHHTSTTHHHHEEE---EEESGGGSCT
T ss_pred CceeeeeecccCCceEEEecCCCCCCCcccccCCCCCCHHHHHHHHHHHHHHHHHHhCcchhhcccc---ccCCCccccc
Confidence 455666779999999999999999999999 999999999999999999999999999999887644 2356654444
Q ss_pred CCCHHHHHHHhhhccccccccccccccCcCCCCCcccCCCccccccCCceEeecccccccccccccccEEEeeccccccc
Q psy14643 181 FESDDYWACTARQITATVHHMSGTCRMGINEDGTTVVDNELRVHGIKNLRVADASVMPILIAAHPMAPIYMIGEKCADMI 260 (801)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~H~~GT~~Mg~~~~~~~VVD~~lrV~gv~~LrV~DaSv~P~~~~~n~~~~~~~i~~~~a~~i 260 (801)
..+|++|+||+|+...+.||++||||||++++ +||||++||||||+|||||||||||+++++||++|+||||||+||+|
T Consensus 497 ~~sd~~~~~~~r~~~~t~~H~~GTc~Mg~~~~-~~VVD~~lrV~Gv~~LrVvDaSv~P~~~~~n~~~t~~aiaeraAd~I 575 (583)
T 3qvp_A 497 DADLSAWTEYIPYHFRPNYHGVGTCSMMPKEM-GGVVDNAARVYGVQGLRVIDGSIPPTQMSSHVMTVFYAMALKISDAI 575 (583)
T ss_dssp TCCHHHHHHHGGGSCEECSCCBCTTCBSCGGG-TCSBCTTCBBTTCBSEEECSTTCCSSCCSSCSHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhccCCCcCCCCceeCCCCCC-CceECCCCeEecCCCeEEeecccCCCCCCcCcHHHHHHHHHHHHHHH
Confidence 57999999999999999999999999998755 69999999999999999999999999999999999999999999999
Q ss_pred ccccc
Q psy14643 261 KDTWS 265 (801)
Q Consensus 261 ~~~~~ 265 (801)
+++|.
T Consensus 576 ~~~~~ 580 (583)
T 3qvp_A 576 LEDYA 580 (583)
T ss_dssp HHHHH
T ss_pred HHhhh
Confidence 98763
No 15
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=100.00 E-value=1.8e-34 Score=332.92 Aligned_cols=201 Identities=32% Similarity=0.468 Sum_probs=159.6
Q ss_pred eeEEEEeecCCCCCCCCCcEEEeeeccccccCCCcccccccCcchhhhhhhhcccCCCCeEEEEEeccccCCeeEEEccC
Q psy14643 43 VEGIGFVQTKYNTDPSYPDIEFIFAIGSLAADSGHTVRRGMGITDECYNQAYKHLEQKNTWTIWPMLLLPKSRGRILLGS 122 (801)
Q Consensus 43 ~~~~~f~~~~~~~~~~~pd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~P~srG~v~l~s 122 (801)
.+..+|+++.. ....|++|+++.+........ . .. .. ...+.+++.+++++|+|||+|+|+|
T Consensus 331 ~~~~~f~~~~~--~~~~p~~~~~~~~~~~~~~~~---~--~g----------~~-~~~~~~~~~~~~~~P~srG~V~L~s 392 (546)
T 2jbv_A 331 WEIGIFTPTED--GLDRPDLMMHYGSVPFDMNTL---R--HG----------YP-TTENGFSLTPNVTHARSRGTVRLRS 392 (546)
T ss_dssp CCEEEEECSST--TCSSCSEEEEEESSCCCTTTG---G--GT----------CC-CCSSEEEEEEEETTCCCCBEEECSS
T ss_pred hheEEEEecCC--CCCCCceEEEecccccccccc---c--cC----------cc-CCCCeEEEEEEEcccCcccEEEecC
Confidence 35667776531 125789998886643210000 0 00 00 1235788888999999999999999
Q ss_pred CCCCCCceeecCCCCChh--hHHHHHHHHHHHHHHHhccccccccccCCCCCCCCCCCCCCCCHHHHHHHhhhccccccc
Q psy14643 123 RNPLKAPLLYGNYFQDES--DLWTLVEGIKMAVNLSRTEPFQRIGSKLNPVPLPGCKQYEFESDDYWACTARQITATVHH 200 (801)
Q Consensus 123 ~dp~~~P~i~~~y~~~~~--D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~H 200 (801)
+||++.|+|+++|+++|. |++.++++++++++++++.+++.+...+ ..|++ ++.+|++|++|+|+...+.+|
T Consensus 393 ~dp~~~P~I~~~y~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~---~~p~~---~~~sd~~~~~~ir~~~~~~~H 466 (546)
T 2jbv_A 393 RDFRDKPMVDPRYFTDPEGHDMRVMVAGIRKAREIAAQPAMAEWTGRE---LSPGV---EAQTDEELQDYIRKTHNTVYH 466 (546)
T ss_dssp SCTTSCCEEECCTTCCTTCHHHHHHHHHHHHHHHHHTSGGGTTTEEEE---EESCT---TCCSHHHHHHHHHHHCEECSC
T ss_pred CCCCCCceecccccCCCchhHHHHHHHHHHHHHHHHcCcchhhccccc---ccCCC---CCCCHHHHHHHHHhcCCcccc
Confidence 999999999999999999 9999999999999999999998876432 23442 357999999999999999999
Q ss_pred cccccccCcCCCCCcccCCCccccccCCceEeecccccccccccccccEEEeecccccccccccccC
Q psy14643 201 MSGTCRMGINEDGTTVVDNELRVHGIKNLRVADASVMPILIAAHPMAPIYMIGEKCADMIKDTWSQG 267 (801)
Q Consensus 201 ~~GT~~Mg~~~~~~~VVD~~lrV~gv~~LrV~DaSv~P~~~~~n~~~~~~~i~~~~a~~i~~~~~~g 267 (801)
++||||||+..|++||||++||||||+|||||||||||+++++||++|+||||||+||.|++++...
T Consensus 467 ~~GTcrMG~~~d~~~VVD~~lrV~Gv~nLrVvDaSv~P~~~~~np~~ti~aiAeraAd~I~~~~~~~ 533 (546)
T 2jbv_A 467 PVGTVRMGAVEDEMSPLDPELRVKGVTGLRVADASVMPEHVTVNPNITVMMIGERCADLIRSARAGE 533 (546)
T ss_dssp CBCTTCBCCTTCTTCSBCTTCBBTTSBSEEECSGGGCSSCCSSCCHHHHHHHHHHHHHHC-------
T ss_pred cccccccCCCCCCCceECCCCEEECCCCeEEeecccCCCCCCcchHHHHHHHHHHHHHHHHhhcccC
Confidence 9999999975567899999999999999999999999999999999999999999999999987543
No 16
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=100.00 E-value=3.8e-33 Score=322.45 Aligned_cols=152 Identities=26% Similarity=0.344 Sum_probs=139.9
Q ss_pred CCCeEEEEEeccccCCeeEEEccCCCCCCCceeecCCCCChhhHHHHHHHHHHHHHHHhccccccccccCCCCCCCCCCC
Q psy14643 99 QKNTWTIWPMLLLPKSRGRILLGSRNPLKAPLLYGNYFQDESDLWTLVEGIKMAVNLSRTEPFQRIGSKLNPVPLPGCKQ 178 (801)
Q Consensus 99 ~~~~~~~~~~l~~P~srG~v~l~s~dp~~~P~i~~~y~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 178 (801)
....+++...+++|+|||+|+++|+||.+.|+|+++|++++.|++.++++++.+++++++++++.+...+ ..|++
T Consensus 368 ~~~~~~~~~~l~~p~srG~v~~~s~dp~~~p~i~~~~~~~~~d~~~~~~~~~~~r~i~~~~~~~~~~~~~---~~pg~-- 442 (526)
T 3t37_A 368 AGSAYSLLFGITHPTSRGSVRISGPELGDRLIIDPAYLQTGRDRERFRRALEASRTIGHRDELAGWRERE---LLPGT-- 442 (526)
T ss_dssp TTSEEEEEEEESSCCCCBEEECSSSSTTSCCEEECCTTCSHHHHHHHHHHHHHHHHHHTCGGGTTTEEEE---CSSCC--
T ss_pred CCcceeeeccccCccccCcceeccCCCccCceeccccCCCHHHHHHHHHHHHHHHHHHcChhhhhccccc---cCCCC--
Confidence 3467889999999999999999999999999999999999999999999999999999999998876553 34554
Q ss_pred CCCCCHHHHHHHhhhccccccccccccccCcCCCCCcccCCCccccccCCceEeecccccccccccccccEEEeeccccc
Q psy14643 179 YEFESDDYWACTARQITATVHHMSGTCRMGINEDGTTVVDNELRVHGIKNLRVADASVMPILIAAHPMAPIYMIGEKCAD 258 (801)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~H~~GT~~Mg~~~~~~~VVD~~lrV~gv~~LrV~DaSv~P~~~~~n~~~~~~~i~~~~a~ 258 (801)
..++++|++|+|+...|.||++||||||. |++||||++|||||++|||||||||||+++++||++|+||||||+||
T Consensus 443 --~~~~~~~~~~ir~~~~t~~H~~GTcrMG~--d~~sVVD~~~rV~Gv~nL~VvDaSv~P~~~~~np~~ti~aiAEkaAd 518 (526)
T 3t37_A 443 --PNSAAEMDDFIARSVITHHHPCGTCRMGK--DPDAVVDANLRLKALDNLFVVDASIMPNLTAGPIHAAVLAIAETFAR 518 (526)
T ss_dssp --CCSHHHHHHHHHHHEEECSCCBCTTCBCS--STTCSBCTTCBBTTCSSEEECSGGGCSSCCSSCCHHHHHHHHHHHHH
T ss_pred --CCCHHHHHHHHHhcCccCcccCccccCCC--CCCccCCCCCEEcCCCCeEEEEcCcccCCcChHHHHHHHHHHHHHHH
Confidence 26899999999999999999999999997 45799999999999999999999999999999999999999999998
Q ss_pred c
Q psy14643 259 M 259 (801)
Q Consensus 259 ~ 259 (801)
.
T Consensus 519 ~ 519 (526)
T 3t37_A 519 Q 519 (526)
T ss_dssp H
T ss_pred H
Confidence 5
No 17
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=99.98 E-value=7.3e-34 Score=330.11 Aligned_cols=161 Identities=25% Similarity=0.307 Sum_probs=144.7
Q ss_pred CeEEEEEeccccCCeeEEEccCCCCCCCc-eeecCCCCChhhHHHHHHHHHHHHHHHhccccccccccCCCCCCCCCCCC
Q psy14643 101 NTWTIWPMLLLPKSRGRILLGSRNPLKAP-LLYGNYFQDESDLWTLVEGIKMAVNLSRTEPFQRIGSKLNPVPLPGCKQY 179 (801)
Q Consensus 101 ~~~~~~~~l~~P~srG~v~l~s~dp~~~P-~i~~~y~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 179 (801)
+.+++.+++++|+|||+|+|+|+||++.| +|++||+++|.|++.++++++++++++++++++.+...+ ..|++...
T Consensus 423 ~~~~~~~~~~~P~srG~V~L~s~dp~~~P~~i~~~y~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~---~~pg~~~~ 499 (587)
T 1gpe_A 423 GKINFDLWDLIPFTRGSVHILSSDPYLWQFANDPKFFLNEFDLLGQAAASKLARDLTSQGAMKEYFAGE---TLPGYNLV 499 (587)
T ss_dssp TEEEEEEEESSCCCCBEEEESSSCGGGTCEEEECCTTSSHHHHHHHHHHHHHHHHHHTSTTHHHHEEEE---EESGGGSC
T ss_pred CcEEEEEEecCCccceeEEeCCCCcccCccEeecccCCChHHHHHHHHHHHHHHHHHcCcchhhhcccc---cCCCcccc
Confidence 46788889999999999999999999999 999999999999999999999999999999998876432 23332212
Q ss_pred CCCCHHHHHHHhhhccccccccccccccCcCCCCCcccCCCccccccCCceEeecccccccccccccccEEEeecccccc
Q psy14643 180 EFESDDYWACTARQITATVHHMSGTCRMGINEDGTTVVDNELRVHGIKNLRVADASVMPILIAAHPMAPIYMIGEKCADM 259 (801)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~H~~GT~~Mg~~~~~~~VVD~~lrV~gv~~LrV~DaSv~P~~~~~n~~~~~~~i~~~~a~~ 259 (801)
...+|++|++|+|+...+.+|++||||||++++ +||||++||||||+|||||||||||+++++||++|+||||||+||+
T Consensus 500 ~~~sd~~~~~~ir~~~~t~~H~~GTcrMG~~~~-~sVVD~~lrV~Gv~nLrVvDaSv~P~~~~~Np~~ti~aiAeraAd~ 578 (587)
T 1gpe_A 500 QNATLSQWSDYVLQNFRPNWHAVSSCSMMSREL-GGVVDATAKVYGTQGLRVIDGSIPPTQVSSHVMTIFYGMALKVADA 578 (587)
T ss_dssp TTCCHHHHHHHHHHSCEECSCCBCTTCBSCGGG-TCSBCTTCBBTTCBSEEECSTTCCSSCCSSCSHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhcCcccCccCccccCCCCC-CceECCCCEEECCCCcEEeeeccCCCCCCcchHHHHHHHHHHHHHH
Confidence 237999999999999999999999999998654 6899999999999999999999999999999999999999999999
Q ss_pred cccccc
Q psy14643 260 IKDTWS 265 (801)
Q Consensus 260 i~~~~~ 265 (801)
|++++.
T Consensus 579 I~~~~~ 584 (587)
T 1gpe_A 579 ILDDYA 584 (587)
T ss_dssp HHHHHH
T ss_pred HHhhhh
Confidence 998764
No 18
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=99.97 E-value=5.5e-32 Score=313.53 Aligned_cols=206 Identities=18% Similarity=0.212 Sum_probs=158.9
Q ss_pred HHHHHHHcCCCCcccCccceeEEEEeecCCCCCCCCCcEEEeeeccccccCCCcccccccCcchhhhhhhhcccCCCCeE
Q psy14643 24 FTMMYNISKGGGMGSIPGGVEGIGFVQTKYNTDPSYPDIEFIFAIGSLAADSGHTVRRGMGITDECYNQAYKHLEQKNTW 103 (801)
Q Consensus 24 ~~~~y~~~~~G~l~~~~~~~~~~~f~~~~~~~~~~~pd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (801)
...+|+..++||++. +.. ..+|+++........++++..+.+..... .+ +.+....+.+
T Consensus 337 ~~~~~~~~~~g~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----------------~~~~~~~~~~ 395 (546)
T 1kdg_A 337 DAAQYLANQSGVFAG--ASP-KLNFWRAYSGSDGFTRYAQGTVRPGAASV-NS-----------------SLPYNASQIF 395 (546)
T ss_dssp HHHHHHHHSCSGGGS--CSC-CEEEEEEEECTTSCEEEEEEEEEESCSCC-CC-----------------SSCCCGGGEE
T ss_pred HHHHHHHcCCccccc--CCc-ceEEEEccCCCCcchhhhhheeccccccc-cc-----------------ccccCCCCeE
Confidence 356888889999986 222 33576642111112245555554321100 00 0011123578
Q ss_pred EEEEecccc-CCeeEEEccCCCCCCCceeecCCCCChhhHHHHHHHHHHHHHHHhccccccccccCCCCCCCCCCCCCCC
Q psy14643 104 TIWPMLLLP-KSRGRILLGSRNPLKAPLLYGNYFQDESDLWTLVEGIKMAVNLSRTEPFQRIGSKLNPVPLPGCKQYEFE 182 (801)
Q Consensus 104 ~~~~~l~~P-~srG~v~l~s~dp~~~P~i~~~y~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 182 (801)
++.+++++| +|||+|+|+|+| ..|.|+++|+++|.|++.|+++++++++++++.+...+ ..|++ ..
T Consensus 396 ~~~~~~~~p~~srG~v~L~s~~--~~~~i~~~y~~~~~D~~~~~~~~~~~~~~~~~~~~~~~-------~~p~~----~~ 462 (546)
T 1kdg_A 396 TITVYLSTGIQSRGRIGIDAAL--RGTVLTPPWLVNPVDKTVLLQALHDVVSNIGSIPGLTM-------ITPDV----TQ 462 (546)
T ss_dssp EEEEEECTTCCCCBEEEECTTC--CEEEEECCTTCSHHHHHHHHHHHHHHTTTGGGSTTCEE-------EESCT----TS
T ss_pred EEEeeecCCCCCCceEecCCCC--CCCcccccccCCchHHHHHHHHHHHHHHHhcCCCcccc-------cCCCC----CC
Confidence 888999999 999999999988 66789999999999999999999999999988753332 12332 25
Q ss_pred CHHHHHHHhhhccccccccccccccCcCCCCCcccCCCccccccCCceEeecccccccccccccccEEEeeccccccccc
Q psy14643 183 SDDYWACTARQITATVHHMSGTCRMGINEDGTTVVDNELRVHGIKNLRVADASVMPILIAAHPMAPIYMIGEKCADMIKD 262 (801)
Q Consensus 183 ~~~~~~~~~~~~~~~~~H~~GT~~Mg~~~~~~~VVD~~lrV~gv~~LrV~DaSv~P~~~~~n~~~~~~~i~~~~a~~i~~ 262 (801)
+|+++.++++....+.+|++||||||+++ ++||||++||||||+|||||||||||+++++||++|+||||||+||.|++
T Consensus 463 ~~~~~~~~~~~~~~t~~H~~GTcrMG~~~-~~~VVD~~lrV~Gv~nLrVvDaSv~P~~~~~np~~ti~aiAeraAd~I~~ 541 (546)
T 1kdg_A 463 TLEEYVDAYDPATMNSNHWVSSTTIGSSP-QSAVVDSNVKVFGTNNLFIVDAGIIPHLPTGNPQGTLMSAAEQAAAKILA 541 (546)
T ss_dssp CHHHHHHHSCGGGGCCSCCBCTTCBCSCT-TTCSBCTTCBBTTCSSEEECSGGGCSSCCSSCSHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhcCcccccccceecCCCC-CCeeECCCCeEccCCCcEEeEecccCCCCCccHHHHHHHHHHHHHHHHHh
Confidence 78899999999999999999999999864 47999999999999999999999999999999999999999999999998
Q ss_pred cc
Q psy14643 263 TW 264 (801)
Q Consensus 263 ~~ 264 (801)
++
T Consensus 542 ~~ 543 (546)
T 1kdg_A 542 LA 543 (546)
T ss_dssp ST
T ss_pred hc
Confidence 75
No 19
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=99.97 E-value=7.8e-32 Score=310.17 Aligned_cols=157 Identities=27% Similarity=0.345 Sum_probs=135.5
Q ss_pred eEEEEEeccccCCeeEEEc-cCCCCCCCceeecCCCCChhhHHHHHHHHHHHHHHHhccccccccccCCCCCCCCCCC--
Q psy14643 102 TWTIWPMLLLPKSRGRILL-GSRNPLKAPLLYGNYFQDESDLWTLVEGIKMAVNLSRTEPFQRIGSKLNPVPLPGCKQ-- 178 (801)
Q Consensus 102 ~~~~~~~l~~P~srG~v~l-~s~dp~~~P~i~~~y~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-- 178 (801)
...+...+++|+|||+|+| +|+||++.|+|++||+++|.|++.++++++++++++++++++.+...+. .+.|++..
T Consensus 355 ~~~~~~~l~~P~SrG~V~L~~s~Dp~~~P~i~~~y~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~p~~~~~~ 433 (536)
T 1ju2_A 355 FAHFASKVAGPLSYGSLTLKSSSNVRVSPNVKFNYYSNLTDLSHCVSGMKKIGELLSTDALKPYKVEDL-PGVEGFNILG 433 (536)
T ss_dssp EEEEEEEESSCSCCEEEECSCSSCTTSCCEECCCTTCSHHHHHHHHHHHHHHHHHHTSGGGGGGCSSCC-STTCSCCBSS
T ss_pred eEEEeeecCCCCcceEEEeCCCCCcccCceecccccCCccHHHHHHHHHHHHHHHHcCccchhhhcccc-ccCCCccccc
Confidence 3456678899999999999 9999999999999999999999999999999999999999998865432 11232210
Q ss_pred ----CCCCCHHHHHHHhhhccccccccccccccCcCCCCCcccCCCccccccCCceEeecccccccccccccccEEEeec
Q psy14643 179 ----YEFESDDYWACTARQITATVHHMSGTCRMGINEDGTTVVDNELRVHGIKNLRVADASVMPILIAAHPMAPIYMIGE 254 (801)
Q Consensus 179 ----~~~~~~~~~~~~~~~~~~~~~H~~GT~~Mg~~~~~~~VVD~~lrV~gv~~LrV~DaSv~P~~~~~n~~~~~~~i~~ 254 (801)
....+|++|++|+|+...+.||++|||||| +|||++||||||+|||||||||||+++++||++|+|||||
T Consensus 434 ~~~p~~~~~d~~~~~~ir~~~~t~~H~~GTcrMG------~VVD~~lrV~Gv~nLrVvDaSv~P~~~~~np~~t~~aiAe 507 (536)
T 1ju2_A 434 IPLPKDQTDDAAFETFCRESVASYWHYHGGCLVG------KVLDGDFRVTGINALRVVDGSTFPYTPASHPQGFYLMLGR 507 (536)
T ss_dssp SCCCSCTTCHHHHHHHHHHHCEECSCCEESSCBT------TTBCTTSBBTTCBTEEECSGGGCSSCSSSSCHHHHHHHHH
T ss_pred cCCCcccCCHHHHHHHHHhccCccccCcCccCCc------cEECCCCeEcCCCCeEEeecccCCCCCCcchHHHHHHHHH
Confidence 024689999999999999999999999998 4999999999999999999999999999999999999999
Q ss_pred cccccc-ccccc
Q psy14643 255 KCADMI-KDTWS 265 (801)
Q Consensus 255 ~~a~~i-~~~~~ 265 (801)
|+|+.| ++.|.
T Consensus 508 r~A~~ii~~~~~ 519 (536)
T 1ju2_A 508 YVGIKILQERSA 519 (536)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHhhhh
Confidence 976655 45553
No 20
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=99.91 E-value=1.3e-25 Score=256.93 Aligned_cols=135 Identities=20% Similarity=0.266 Sum_probs=112.3
Q ss_pred CeEEEEEeccccCCeeEEEccCCCCCCCceeecCCCCChhhHHHHHHHHH-HHHHHHhccccccccccCCCCCCCCCCCC
Q psy14643 101 NTWTIWPMLLLPKSRGRILLGSRNPLKAPLLYGNYFQDESDLWTLVEGIK-MAVNLSRTEPFQRIGSKLNPVPLPGCKQY 179 (801)
Q Consensus 101 ~~~~~~~~l~~P~srG~v~l~s~dp~~~P~i~~~y~~~~~D~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 179 (801)
..+++...+++|+|||+|+|+|+|| .|+++|+.++ | +.|+++++ ++++++++.+. + ++...
T Consensus 366 ~~~~~~~~~~~p~srG~V~L~s~~~----~i~~~~~~~~-D-~~~~~~~~~~~~~i~~~~~~--~---------~~~~~- 427 (504)
T 1n4w_A 366 TWVSLYLAITKNPQRGTFVYDAATD----RAKLNWTRDQ-N-APAVNAAKALFDRINKANGT--I---------YRYDL- 427 (504)
T ss_dssp CCEEEEEEEECCCCCBCEEEETTTT----EEEECCCGGG-G-HHHHHHHHHHHHHHHHHHTC--C---------BCCSS-
T ss_pred hhhhhheeeeccCCCcEEEecCCCC----ceEeccCCCc-C-HHHHHHHHHHHHHHHhccCC--C---------cCCch-
Confidence 3577788889999999999999876 6999999999 9 88999999 99999988663 1 11100
Q ss_pred CCCCHHHHHHHhhhccccccccccccccCcCCCCCcccCCCccccccCCceEeecccccccccccccccEEEeecccccc
Q psy14643 180 EFESDDYWACTARQITATVHHMSGTCRMGINEDGTTVVDNELRVHGIKNLRVADASVMPILIAAHPMAPIYMIGEKCADM 259 (801)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~H~~GT~~Mg~~~~~~~VVD~~lrV~gv~~LrV~DaSv~P~~~~~n~~~~~~~i~~~~a~~ 259 (801)
+.. + |+++ ...+.+|++|||||| +|||++|||||++|||||||||||+++++||++|+||||||+||.
T Consensus 428 -~~~-~-~~~~---~~~~~~H~~GTcrMG------~VVD~~~rV~Gv~nLrVvDaSv~P~~~~~np~~ti~aiAeraAd~ 495 (504)
T 1n4w_A 428 -FGT-Q-LKAF---ADDFCYHPLGGCVLG------KATDDYGRVAGYKNLYVTDGSLIPGSVGVNPFVTITALAERNVER 495 (504)
T ss_dssp -SSS-S-CCSE---ECSEESSCBCSSCTT------TTBCTTSBBTTCSSEEECSGGGSCSCCSSCSHHHHHHHHHHHHHH
T ss_pred -hhh-h-hhhh---ccCccccccCCceee------eEECCCCeEeccCCeEEeeccccCCCCCcChHHHHHHHHHHHHHH
Confidence 000 0 1111 456899999999999 599999999999999999999999999999999999999999999
Q ss_pred cccccc
Q psy14643 260 IKDTWS 265 (801)
Q Consensus 260 i~~~~~ 265 (801)
|++++.
T Consensus 496 I~~~~~ 501 (504)
T 1n4w_A 496 IIKQDV 501 (504)
T ss_dssp HHHHHC
T ss_pred HHHhhc
Confidence 998764
No 21
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=99.89 E-value=8.1e-25 Score=250.36 Aligned_cols=134 Identities=18% Similarity=0.141 Sum_probs=110.7
Q ss_pred CeEEEEEeccccCCeeEEEccCCCCCCCceeecCCCCChhhHHHHHHHHH-HHHHHHhccccccccccCCCCCCCCCCCC
Q psy14643 101 NTWTIWPMLLLPKSRGRILLGSRNPLKAPLLYGNYFQDESDLWTLVEGIK-MAVNLSRTEPFQRIGSKLNPVPLPGCKQY 179 (801)
Q Consensus 101 ~~~~~~~~l~~P~srG~v~l~s~dp~~~P~i~~~y~~~~~D~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 179 (801)
..++++.++.+|.|||+|+|+|+|| .|+++|+.++ | ..++++++ ++++++++.+. +... +.
T Consensus 371 ~~~~~~~~~~~p~s~G~V~L~s~~~----~i~~~~~~~~-D-~~~~~~~~~~~~~i~~~~~~--~~~~----~~------ 432 (507)
T 1coy_A 371 TYVSLYLAITKNPERARFQFNSGTG----KVDLTWAQSQ-N-QKGIDMAKKVFDKINQKEGT--IYRT----DL------ 432 (507)
T ss_dssp CCEEEEEEEECCCCCBCEEEETTTT----EEEECCCGGG-G-HHHHHHHHHHHHHHHHHHTC--CBCS----SC------
T ss_pred hheeeeEEEeeeCCCcEEEEccCCC----ceeeccCCCC-c-HHHHHHHHHHHHHHHhhcCC--cccC----cc------
Confidence 4566777889999999999999876 8999999999 8 57888888 99999988662 2111 11
Q ss_pred CCCCHHHHHHHhhhccccccccccccccCcCCCCCcccCCCccccccCCceEeecccccccccccccccEEEeecccccc
Q psy14643 180 EFESDDYWACTARQITATVHHMSGTCRMGINEDGTTVVDNELRVHGIKNLRVADASVMPILIAAHPMAPIYMIGEKCADM 259 (801)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~H~~GT~~Mg~~~~~~~VVD~~lrV~gv~~LrV~DaSv~P~~~~~n~~~~~~~i~~~~a~~ 259 (801)
..+|+ ++| ...+.+|++|||||| +|||++|||||++|||||||||||+++++||++|+||||||+||.
T Consensus 433 -~~~d~--~~~---~~~~~~H~~GTcrMG------~VVD~~~rV~Gv~nLrVvDaSv~P~~~~~Np~~ti~alAeraAd~ 500 (507)
T 1coy_A 433 -FGVYY--KTW---GDDFTYHPLGGVLLN------KATDNFGRLPEYPGLYVVDGSLVPGNVGVNPFVTITALAERNMDK 500 (507)
T ss_dssp -C--CC--CSS---BCSEESCCBCSSCTT------TTSCTTSBCTTSTTEEECSGGGSCSCCSSCSHHHHHHHHHHHHHH
T ss_pred -cccch--hhh---cccccccccCCcchh------heECCCCeEeccCCeEEeechhccCCCCcChHHHHHHHHHHHHHH
Confidence 12222 233 456889999999999 399999999999999999999999999999999999999999999
Q ss_pred ccccc
Q psy14643 260 IKDTW 264 (801)
Q Consensus 260 i~~~~ 264 (801)
|+++.
T Consensus 501 I~~~~ 505 (507)
T 1coy_A 501 IISSD 505 (507)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 98753
No 22
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=99.83 E-value=1.3e-21 Score=228.30 Aligned_cols=138 Identities=21% Similarity=0.269 Sum_probs=117.6
Q ss_pred eccccCCeeEEEccC--CCCCCCceeecCCCCChh-hHHHHHHHHHHHHHHHhccccccccccCCCCCCCCCCCCCCCCH
Q psy14643 108 MLLLPKSRGRILLGS--RNPLKAPLLYGNYFQDES-DLWTLVEGIKMAVNLSRTEPFQRIGSKLNPVPLPGCKQYEFESD 184 (801)
Q Consensus 108 ~l~~P~srG~v~l~s--~dp~~~P~i~~~y~~~~~-D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 184 (801)
.-..|.++++|+|++ +|+++.|+++++|..++. |++.+.++++.+++++++.+.+.... .+. ..
T Consensus 475 ~e~~p~~~n~v~L~~~~~D~~g~P~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~~~~~~------~~~-----~~-- 541 (623)
T 3pl8_A 475 GRTEPKEENKLWFSDKITDAYNMPQPTFDFRFPAGRTSKEAEDMMTDMCVMSAKIGGFLPGS------LPQ-----FM-- 541 (623)
T ss_dssp ECCCCCTTCEEEEEEEEECTTSSEEEEEECCCCTTHHHHHHHHHHHHHHHHHTTTEEECTTS------CSE-----EC--
T ss_pred EeeccCCCCEEEECCCCcCCCCCceEEEEEeCCcHHHHHHHHHHHHHHHHHHHhcCCcccCc------hhh-----cc--
Confidence 445688999999987 899999999999999999 99999999999999998755433211 000 00
Q ss_pred HHHHHHhhhccccccccccccccCcCCCCCccc-CCCccccccCCceEeecccccccccccccccEEEeecccccccccc
Q psy14643 185 DYWACTARQITATVHHMSGTCRMGINEDGTTVV-DNELRVHGIKNLRVADASVMPILIAAHPMAPIYMIGEKCADMIKDT 263 (801)
Q Consensus 185 ~~~~~~~~~~~~~~~H~~GT~~Mg~~~~~~~VV-D~~lrV~gv~~LrV~DaSv~P~~~~~n~~~~~~~i~~~~a~~i~~~ 263 (801)
...+++|++||||||.+++.+||| |+++||||++||||+|+||||+.+++||++|+||+|+|+|+.|+++
T Consensus 542 ---------~~~~~~H~~gt~~mg~~~~~~~vvvd~~~~~~~~~~l~v~d~s~~p~~~~~np~~t~~a~a~r~a~~i~~~ 612 (623)
T 3pl8_A 542 ---------EPGLVLHLGGTHRMGFDEKEDNCCVNTDSRVFGFKNLFLGGCGNIPTAYGANPTLTAMSLAIKSCEYIKQN 612 (623)
T ss_dssp ---------CTTTTCCCBCTTCBCSSTTTTTCSBCTTCBBTTCSSEEECSGGGCCSCCCSCCHHHHHHHHHHHHHHHHHH
T ss_pred ---------CCCCcccCCCceeCCCCCCCCeeEECCCCCEecCCCeEEecCCccCCCCCcChHHHHHHHHHHHHHHHHHH
Confidence 124789999999999973457997 9999999999999999999999999999999999999999999998
Q ss_pred cccC
Q psy14643 264 WSQG 267 (801)
Q Consensus 264 ~~~g 267 (801)
+..|
T Consensus 613 ~~~~ 616 (623)
T 3pl8_A 613 FTPS 616 (623)
T ss_dssp CCCC
T ss_pred hhcC
Confidence 8776
No 23
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=97.96 E-value=3.9e-05 Score=87.36 Aligned_cols=65 Identities=15% Similarity=0.304 Sum_probs=52.1
Q ss_pred hhccccCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEECCEEEEEEeeeEEEecCCCCC-CHHHHHh
Q psy14643 431 YIEPVRNRPNLHISLNSQVTRVLIDSESKKAYGVEFVKNGKKRIVFARKEIILSAGAIN-TPHILMH 496 (801)
Q Consensus 431 ~L~~~~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~~g~~~~v~A~k~VILaAGai~-SprLLl~ 496 (801)
.|.....+.|++|++++.|++|+.+++ ++++||++..+++..+|.|+|.||||+|++. ++.+|..
T Consensus 207 ~L~~~~~~~Gv~i~~~t~v~~L~~~~~-g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~~n~~m~~~ 272 (510)
T 4at0_A 207 PLVETAEKLGVRAEYDMRVQTLVTDDT-GRVVGIVAKQYGKEVAVRARRGVVLATGSFAYNDKMIEA 272 (510)
T ss_dssp HHHHHHHHTTCEEECSEEEEEEEECTT-CCEEEEEEEETTEEEEEEEEEEEEECCCCCTTCHHHHHH
T ss_pred HHHHHHHHcCCEEEecCEeEEEEECCC-CcEEEEEEEECCcEEEEEeCCeEEEeCCChhhCHHHHHH
Confidence 333334456899999999999998743 6899999988888889999668999999998 5665543
No 24
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=96.65 E-value=0.0087 Score=68.75 Aligned_cols=63 Identities=14% Similarity=0.303 Sum_probs=48.5
Q ss_pred hhccccCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEE-CCEEEEEEeeeEEEecCCCCCCHHHHH
Q psy14643 431 YIEPVRNRPNLHISLNSQVTRVLIDSESKKAYGVEFVK-NGKKRIVFARKEIILSAGAINTPHILM 495 (801)
Q Consensus 431 ~L~~~~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~-~g~~~~v~A~k~VILaAGai~SprLLl 495 (801)
.|.....+.+++|++++.|++|+.+++ ++++||++.. +|+..++.| +.||||+|+....+=|+
T Consensus 255 ~L~~~~~~~gv~i~~~~~v~~l~~~~~-g~v~Gv~~~~~~g~~~~i~A-~~VVlAtGg~s~~~~~~ 318 (566)
T 1qo8_A 255 TLRKAAKEQGIDTRLNSRVVKLVVNDD-HSVVGAVVHGKHTGYYMIGA-KSVVLATGGYGMNKEMI 318 (566)
T ss_dssp HHHHHHHHTTCCEECSEEEEEEEECTT-SBEEEEEEEETTTEEEEEEE-EEEEECCCCCTTCHHHH
T ss_pred HHHHHHHhcCCEEEeCCEEEEEEECCC-CcEEEEEEEeCCCcEEEEEc-CEEEEecCCcccCHHHH
Confidence 333334456899999999999998653 5899999985 788888999 57999999988654333
No 25
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=96.35 E-value=0.0091 Score=68.67 Aligned_cols=62 Identities=18% Similarity=0.197 Sum_probs=48.3
Q ss_pred hhccccCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEE-CCEEEEEEeeeEEEecCCCCCC-HHHH
Q psy14643 431 YIEPVRNRPNLHISLNSQVTRVLIDSESKKAYGVEFVK-NGKKRIVFARKEIILSAGAINT-PHIL 494 (801)
Q Consensus 431 ~L~~~~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~-~g~~~~v~A~k~VILaAGai~S-prLL 494 (801)
.|.....+.+++|++++.|++|+.+++ ++++||.+.. +|+..++.|+ .||||+|.... +.++
T Consensus 260 ~L~~~~~~~gv~i~~~~~v~~l~~~~~-g~v~Gv~~~~~~g~~~~i~a~-~VVlAtGg~~~n~~~~ 323 (571)
T 1y0p_A 260 VLYDNAVKRNIDLRMNTRGIEVLKDDK-GTVKGILVKGMYKGYYWVKAD-AVILATGGFAKNNERV 323 (571)
T ss_dssp HHHHHHHHTTCEEESSEEEEEEEECTT-SCEEEEEEEETTTEEEEEECS-EEEECCCCCTTCHHHH
T ss_pred HHHHHHHhcCCEEEeCCEeeEeEEcCC-CeEEEEEEEeCCCcEEEEECC-eEEEeCCCcccCHHHH
Confidence 333344456899999999999998653 5799999986 7888889996 59999999875 4443
No 26
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=95.51 E-value=0.096 Score=58.81 Aligned_cols=56 Identities=16% Similarity=0.223 Sum_probs=36.8
Q ss_pred cCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEECCEEEEEEeeeEEEecCCCCCCHHHHHhh
Q psy14643 436 RNRPNLHISLNSQVTRVLIDSESKKAYGVEFVKNGKKRIVFARKEIILSAGAINTPHILMHS 497 (801)
Q Consensus 436 ~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~~g~~~~v~A~k~VILaAGai~SprLLl~S 497 (801)
.++.+.+|++++.|++|+.++ ++++||+.. +|+ ++.|+ .||.+|+.-.+.+.|+-.
T Consensus 231 ~~~~Gg~I~~~~~V~~I~~~~--~~~~gV~~~-~g~--~~~ad-~VV~~a~~~~~~~~Ll~~ 286 (501)
T 4dgk_A 231 FQDLGGEVVLNARVSHMETTG--NKIEAVHLE-DGR--RFLTQ-AVASNADVVHTYRDLLSQ 286 (501)
T ss_dssp HHHTTCEEECSCCEEEEEEET--TEEEEEEET-TSC--EEECS-CEEECCC-----------
T ss_pred HHHhCCceeeecceeEEEeeC--CeEEEEEec-CCc--EEEcC-EEEECCCHHHHHHHhccc
Confidence 446689999999999999987 789999876 454 46785 699999998888877643
No 27
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=92.64 E-value=0.17 Score=58.01 Aligned_cols=64 Identities=22% Similarity=0.254 Sum_probs=48.1
Q ss_pred hhccccCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEE-CCEEEEEEeeeEEEecCCCCCC-HHHHHh
Q psy14643 431 YIEPVRNRPNLHISLNSQVTRVLIDSESKKAYGVEFVK-NGKKRIVFARKEIILSAGAINT-PHILMH 496 (801)
Q Consensus 431 ~L~~~~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~-~g~~~~v~A~k~VILaAGai~S-prLLl~ 496 (801)
.|.....+.+++|++++.|++|+.+++ ++++||++.. +|+..++.| +.||||+|.... +.+|..
T Consensus 260 ~L~~~~~~~gv~i~~~t~v~~l~~~~~-g~v~GV~~~~~~G~~~~i~A-~~VVlAtGg~~~~~~~~~~ 325 (572)
T 1d4d_A 260 VLWDNAVKRGTDIRLNSRVVRILEDAS-GKVTGVLVKGEYTGYYVIKA-DAVVIAAGGFAKNNERVSK 325 (572)
T ss_dssp HHHHHHHHTTCEEESSEEEEEEEEC---CCEEEEEEEETTTEEEEEEC-SEEEECCCCCTTCHHHHHH
T ss_pred HHHHHHHHcCCeEEecCEEEEEEECCC-CeEEEEEEEeCCCcEEEEEc-CEEEEeCCCCccCHHHHHH
Confidence 333334456899999999999987642 5799999985 788888999 579999999874 555543
No 28
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=92.25 E-value=0.2 Score=54.16 Aligned_cols=57 Identities=23% Similarity=0.325 Sum_probs=41.4
Q ss_pred ccCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEECCEEEEEEeeeEEEecCCCCCCHHHHHhhCC
Q psy14643 435 VRNRPNLHISLNSQVTRVLIDSESKKAYGVEFVKNGKKRIVFARKEIILSAGAINTPHILMHSGV 499 (801)
Q Consensus 435 ~~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~~g~~~~v~A~k~VILaAGai~SprLLl~SGI 499 (801)
...+.+++|+.++.|++|..++ +++.+|+.. +| ++.|+ .||+|+|+. |+.|+...|+
T Consensus 183 ~~~~~g~~i~~~~~v~~i~~~~--~~~~~v~~~-~g---~~~a~-~vV~a~G~~-s~~l~~~~g~ 239 (405)
T 2gag_B 183 KANEMGVDIIQNCEVTGFIKDG--EKVTGVKTT-RG---TIHAG-KVALAGAGH-SSVLAEMAGF 239 (405)
T ss_dssp HHHHTTCEEECSCCEEEEEESS--SBEEEEEET-TC---CEEEE-EEEECCGGG-HHHHHHHHTC
T ss_pred HHHHCCCEEEcCCeEEEEEEeC--CEEEEEEeC-Cc---eEECC-EEEECCchh-HHHHHHHcCC
Confidence 3345689999999999998865 467777643 34 57885 799999974 5566665553
No 29
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=91.20 E-value=0.38 Score=55.47 Aligned_cols=53 Identities=13% Similarity=0.169 Sum_probs=44.5
Q ss_pred ccCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEE--CCEEEEEEeeeEEEecCCCCCC
Q psy14643 435 VRNRPNLHISLNSQVTRVLIDSESKKAYGVEFVK--NGKKRIVFARKEIILSAGAINT 490 (801)
Q Consensus 435 ~~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~--~g~~~~v~A~k~VILaAGai~S 490 (801)
...+.|++|+.++.|++|+.++ ++++||.+.. +|+.+++.|+ .||||+|.+..
T Consensus 164 ~~~~~gv~i~~~~~v~~Li~~~--g~v~Gv~~~~~~~G~~~~i~A~-~VVlATGG~~~ 218 (621)
T 2h88_A 164 RSLRYDTSYFVEYFALDLLMEN--GECRGVIALCIEDGTIHRFRAK-NTVIATGGYGR 218 (621)
T ss_dssp HHTTSCCEEEETEEEEEEEEET--TEEEEEEEEETTTCCEEEEEEE-EEEECCCCCGG
T ss_pred HHHhCCCEEEEceEEEEEEEEC--CEEEEEEEEEcCCCcEEEEEcC-eEEECCCcccc
Confidence 3456799999999999999875 6899999874 6777889995 79999999864
No 30
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=90.25 E-value=0.41 Score=54.58 Aligned_cols=61 Identities=13% Similarity=0.125 Sum_probs=50.0
Q ss_pred cCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEE--CCEEEEEEeeeEEEecCCCCCCHHHHHhhCCC
Q psy14643 436 RNRPNLHISLNSQVTRVLIDSESKKAYGVEFVK--NGKKRIVFARKEIILSAGAINTPHILMHSGVG 500 (801)
Q Consensus 436 ~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~--~g~~~~v~A~k~VILaAGai~SprLLl~SGIG 500 (801)
+.+.+++|+.+++|++|..++ ++++||++.. .|+..+++|+ .||+|+|+ .+.+|+...|+.
T Consensus 180 a~~~G~~i~~~~~V~~l~~~~--g~v~gV~~~d~~tg~~~~i~A~-~VV~AaG~-~s~~l~~~~g~~ 242 (561)
T 3da1_A 180 AVARGAVALNYMKVESFIYDQ--GKVVGVVAKDRLTDTTHTIYAK-KVVNAAGP-WVDTLREKDRSK 242 (561)
T ss_dssp HHHTTCEEEESEEEEEEEEET--TEEEEEEEEETTTCCEEEEEEE-EEEECCGG-GHHHHHHTTTCC
T ss_pred HHHcCCEEEcCCEEEEEEEcC--CeEEEEEEEEcCCCceEEEECC-EEEECCCc-chHHHHHhcCCC
Confidence 345689999999999999876 6799999885 5777889995 79999997 478888777664
No 31
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=89.63 E-value=0.46 Score=54.62 Aligned_cols=58 Identities=14% Similarity=0.216 Sum_probs=45.7
Q ss_pred hhccccCCCCeEEeeCceEEEEEeeCCCCeEEEEEEE--ECCEEEEEEeeeEEEecCCCCCCH
Q psy14643 431 YIEPVRNRPNLHISLNSQVTRVLIDSESKKAYGVEFV--KNGKKRIVFARKEIILSAGAINTP 491 (801)
Q Consensus 431 ~L~~~~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~--~~g~~~~v~A~k~VILaAGai~Sp 491 (801)
++..+.+.+|++|+.++.|++|+.++ ++++||.+. .+|+..++.|+ .||||+|+....
T Consensus 140 L~~~~~~~gnv~i~~~~~v~~l~~~~--g~v~Gv~~~~~~~G~~~~i~A~-~VVlAtGg~s~~ 199 (602)
T 1kf6_A 140 LFQTSLQFPQIQRFDEHFVLDILVDD--GHVRGLVAMNMMEGTLVQIRAN-AVVMATGGAGRV 199 (602)
T ss_dssp HHHHHTTCTTEEEEETEEEEEEEEET--TEEEEEEEEETTTTEEEEEECS-CEEECCCCCGGG
T ss_pred HHHHHHhCCCcEEEeCCEEEEEEEeC--CEEEEEEEEEcCCCcEEEEEcC-eEEECCCCCccc
Confidence 33334445569999999999999875 689999877 36777889996 699999997654
No 32
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=88.97 E-value=0.39 Score=55.06 Aligned_cols=52 Identities=13% Similarity=0.141 Sum_probs=42.7
Q ss_pred CCCCeEEeeCceEEEEEeeCCCCeEEEEEEEE--CCEEEEEEeeeEEEecCCCCCC
Q psy14643 437 NRPNLHISLNSQVTRVLIDSESKKAYGVEFVK--NGKKRIVFARKEIILSAGAINT 490 (801)
Q Consensus 437 ~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~--~g~~~~v~A~k~VILaAGai~S 490 (801)
.+.|++|+.++.|++|+.+++ ++++||.+.. +|+..++.|+ .||||+|.+..
T Consensus 154 ~~~gv~i~~~~~v~~L~~~~~-g~v~Gv~~~~~~~g~~~~i~A~-~VVlAtGg~~~ 207 (588)
T 2wdq_A 154 LKNHTTIFSEWYALDLVKNQD-GAVVGCTALCIETGEVVYFKAR-ATVLATGGAGR 207 (588)
T ss_dssp HHTTCEEEETEEEEEEEECTT-SCEEEEEEEETTTCCEEEEEEE-EEEECCCCCGG
T ss_pred HhCCCEEEeCcEEEEEEECCC-CEEEEEEEEEcCCCeEEEEEcC-EEEECCCCCcc
Confidence 356999999999999998633 6799999873 5777789995 79999999754
No 33
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=88.90 E-value=0.46 Score=53.90 Aligned_cols=53 Identities=13% Similarity=0.349 Sum_probs=43.0
Q ss_pred CCCCeEEeeCceEEEEEeeCCC-----CeEEEEEEEE--CCEEEEEEeeeEEEecCCCCCC
Q psy14643 437 NRPNLHISLNSQVTRVLIDSES-----KKAYGVEFVK--NGKKRIVFARKEIILSAGAINT 490 (801)
Q Consensus 437 ~~~nl~v~~~a~V~rI~~d~~~-----~~a~gV~~~~--~g~~~~v~A~k~VILaAGai~S 490 (801)
+++|++|+.++.|++|+.++++ +++.||.+.. +|+.+++.|+ .||||+|....
T Consensus 150 ~~~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~-~VVlAtGg~~~ 209 (540)
T 1chu_A 150 NHPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAK-AVVLATGGASK 209 (540)
T ss_dssp HCTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEECS-EEEECCCCCGG
T ss_pred cCCCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEEcC-eEEECCCCccc
Confidence 3479999999999999984332 2899999884 6888889995 79999998753
No 34
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=88.38 E-value=0.54 Score=53.72 Aligned_cols=59 Identities=10% Similarity=0.067 Sum_probs=47.3
Q ss_pred CCCCeEEeeCceEEEEEeeCCCCeEEEEEEEE--CCEEEEEEeeeEEEecCCCCCCHHHHHhhCC
Q psy14643 437 NRPNLHISLNSQVTRVLIDSESKKAYGVEFVK--NGKKRIVFARKEIILSAGAINTPHILMHSGV 499 (801)
Q Consensus 437 ~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~--~g~~~~v~A~k~VILaAGai~SprLLl~SGI 499 (801)
.+.+++|+.++.|++|..++ +++.+|++.. .++..+++|+ .||+|+|+. +.+|+...|+
T Consensus 199 ~~~Ga~i~~~t~V~~l~~~~--~~v~gV~~~d~~tg~~~~i~A~-~VV~AaG~w-s~~l~~~~g~ 259 (571)
T 2rgh_A 199 AEDGAYLVSKMKAVGFLYEG--DQIVGVKARDLLTDEVIEIKAK-LVINTSGPW-VDKVRNLNFT 259 (571)
T ss_dssp HHTTCEEESSEEEEEEEEET--TEEEEEEEEETTTCCEEEEEBS-CEEECCGGG-HHHHHTTCCS
T ss_pred HHcCCeEEeccEEEEEEEeC--CEEEEEEEEEcCCCCEEEEEcC-EEEECCChh-HHHHHHhhcc
Confidence 45689999999999999876 5789998874 4666789995 799999976 7787765543
No 35
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=87.16 E-value=0.37 Score=51.13 Aligned_cols=60 Identities=13% Similarity=0.259 Sum_probs=43.8
Q ss_pred ccCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEECCEEEEEEeeeEEEecCCCCCCHHHHHhh-CC
Q psy14643 435 VRNRPNLHISLNSQVTRVLIDSESKKAYGVEFVKNGKKRIVFARKEIILSAGAINTPHILMHS-GV 499 (801)
Q Consensus 435 ~~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~~g~~~~v~A~k~VILaAGai~SprLLl~S-GI 499 (801)
.+.+.+++|++++.|++|..+++ + +..|.. .+|+..++.|+ .||+|+|+. |.+|+... |+
T Consensus 159 ~~~~~Gv~i~~~~~v~~i~~~~~-~-~~~v~~-~~g~~~~~~a~-~VV~A~G~~-s~~l~~~~~g~ 219 (369)
T 3dme_A 159 DAESDGAQLVFHTPLIAGRVRPE-G-GFELDF-GGAEPMTLSCR-VLINAAGLH-APGLARRIEGI 219 (369)
T ss_dssp HHHHTTCEEECSCCEEEEEECTT-S-SEEEEE-CTTSCEEEEEE-EEEECCGGG-HHHHHHTEETS
T ss_pred HHHHCCCEEECCCEEEEEEEcCC-c-eEEEEE-CCCceeEEEeC-EEEECCCcc-hHHHHHHhcCC
Confidence 34456899999999999998764 2 223433 35655678895 699999985 88887766 65
No 36
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=87.03 E-value=0.71 Score=53.61 Aligned_cols=51 Identities=14% Similarity=0.244 Sum_probs=42.9
Q ss_pred CCCCeEEeeCceEEEEEeeCCCCeEEEEEEEE--CCEEEEEEeeeEEEecCCCCCC
Q psy14643 437 NRPNLHISLNSQVTRVLIDSESKKAYGVEFVK--NGKKRIVFARKEIILSAGAINT 490 (801)
Q Consensus 437 ~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~--~g~~~~v~A~k~VILaAGai~S 490 (801)
.+.|++|+.++.|++|+.++ ++++||.+.. +|+.+.+.|+ .||||+|.+..
T Consensus 169 ~~~gv~i~~~~~v~~L~~~~--g~v~Gv~~~~~~~G~~~~i~A~-~VVlATGG~~~ 221 (660)
T 2bs2_A 169 LKLGVSIQDRKEAIALIHQD--GKCYGAVVRDLVTGDIIAYVAK-GTLIATGGYGR 221 (660)
T ss_dssp HHHTCEEECSEEEEEEEEET--TEEEEEEEEETTTCCEEEEECS-EEEECCCCCGG
T ss_pred HhCCCEEEECcEEEEEEecC--CEEEEEEEEECCCCcEEEEEcC-EEEEccCcchh
Confidence 35689999999999999865 6899998873 6777889995 79999999864
No 37
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=85.30 E-value=1.4 Score=45.05 Aligned_cols=51 Identities=16% Similarity=0.202 Sum_probs=39.7
Q ss_pred ccCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEE--------C---CEEEEEEeeeEEEecCCCC
Q psy14643 435 VRNRPNLHISLNSQVTRVLIDSESKKAYGVEFVK--------N---GKKRIVFARKEIILSAGAI 488 (801)
Q Consensus 435 ~~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~--------~---g~~~~v~A~k~VILaAGai 488 (801)
+.+..+++++.++.|++|..++ +++.||.+.. + ++..++.|+ .||+|+|+.
T Consensus 129 ~~~~~gv~i~~~~~V~~i~~~~--~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad-~VV~AtG~~ 190 (284)
T 1rp0_A 129 LLARPNVKLFNAVAAEDLIVKG--NRVGGVVTNWALVAQNHHTQSCMDPNVMEAK-IVVSSCGHD 190 (284)
T ss_dssp HHTSTTEEEEETEEEEEEEEET--TEEEEEEEEEHHHHTCTTTSSCCCCEEEEEE-EEEECCCSS
T ss_pred HHhcCCCEEEcCcEEEEEEecC--CeEEEEEEeccccccccCccccCceEEEECC-EEEECCCCc
Confidence 4455799999999999999876 5788988752 2 344678895 799999964
No 38
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=84.68 E-value=0.52 Score=51.66 Aligned_cols=53 Identities=23% Similarity=0.332 Sum_probs=40.3
Q ss_pred ccCCCCeEEeeCc---eEEEEEeeCCCCeEEEEEEEECCEEEEEEeeeEEEecCCCCCCHHHH
Q psy14643 435 VRNRPNLHISLNS---QVTRVLIDSESKKAYGVEFVKNGKKRIVFARKEIILSAGAINTPHIL 494 (801)
Q Consensus 435 ~~~~~nl~v~~~a---~V~rI~~d~~~~~a~gV~~~~~g~~~~v~A~k~VILaAGai~SprLL 494 (801)
.+.+.+++|++++ .|++|+.++ ++++||+.. +|+ ++.|+ .||+|+|+. |++|+
T Consensus 170 ~a~~~Gv~i~~~t~~~~V~~i~~~~--~~v~gV~t~-~G~--~i~Ad-~VV~AtG~~-s~~l~ 225 (438)
T 3dje_A 170 EAQRMGVKFVTGTPQGRVVTLIFEN--NDVKGAVTA-DGK--IWRAE-RTFLCAGAS-AGQFL 225 (438)
T ss_dssp HHHHTTCEEEESTTTTCEEEEEEET--TEEEEEEET-TTE--EEECS-EEEECCGGG-GGGTS
T ss_pred HHHhcCCEEEeCCcCceEEEEEecC--CeEEEEEEC-CCC--EEECC-EEEECCCCC-hhhhc
Confidence 3445689999999 999999876 578888764 453 57885 699999985 55554
No 39
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=84.11 E-value=1.3 Score=47.48 Aligned_cols=65 Identities=15% Similarity=0.187 Sum_probs=47.9
Q ss_pred HhhccccCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEECCEEEEEEeeeEEEecCCCCCCHHHHHhhCC
Q psy14643 430 AYIEPVRNRPNLHISLNSQVTRVLIDSESKKAYGVEFVKNGKKRIVFARKEIILSAGAINTPHILMHSGV 499 (801)
Q Consensus 430 ~~L~~~~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~~g~~~~v~A~k~VILaAGai~SprLLl~SGI 499 (801)
.+|...+.+.|++|+.+++|++|..++ ++++||.+...+...++.|+ .||.|.|+- | .+...-|+
T Consensus 106 ~~L~~~~~~~gv~i~~~~~v~~i~~~~--~~v~gv~~~~~~~~~~~~a~-~vV~A~G~~-s-~~~~~~g~ 170 (397)
T 3cgv_A 106 KHLAALAAKAGADVWVKSPALGVIKEN--GKVAGAKIRHNNEIVDVRAK-MVIAADGFE-S-EFGRWAGL 170 (397)
T ss_dssp HHHHHHHHHHTCEEESSCCEEEEEEET--TEEEEEEEEETTEEEEEEEE-EEEECCCTT-C-HHHHHHTC
T ss_pred HHHHHHHHhCCCEEEECCEEEEEEEeC--CEEEEEEEEECCeEEEEEcC-EEEECCCcc-h-HhHHhcCC
Confidence 345444445789999999999999875 67889998876777889995 799999964 4 44333343
No 40
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=82.79 E-value=1.5 Score=49.32 Aligned_cols=58 Identities=21% Similarity=0.345 Sum_probs=45.0
Q ss_pred HHhhccccCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEE-CCEEEEEEeeeEEEecCCCCC
Q psy14643 429 HAYIEPVRNRPNLHISLNSQVTRVLIDSESKKAYGVEFVK-NGKKRIVFARKEIILSAGAIN 489 (801)
Q Consensus 429 ~~~L~~~~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~-~g~~~~v~A~k~VILaAGai~ 489 (801)
..+|...+.+.|++|+.+++|++|..++ +++++|.+.. +|+..++.|+ .||+|.|.-.
T Consensus 114 ~~~L~~~a~~~Gv~i~~~~~V~~v~~~~--~~v~gv~~~~~dG~~~~i~ad-~VI~AdG~~S 172 (512)
T 3e1t_A 114 DDMLLRNSERKGVDVRERHEVIDVLFEG--ERAVGVRYRNTEGVELMAHAR-FIVDASGNRT 172 (512)
T ss_dssp HHHHHHHHHHTTCEEESSCEEEEEEEET--TEEEEEEEECSSSCEEEEEEE-EEEECCCTTC
T ss_pred HHHHHHHHHhCCCEEEcCCEEEEEEEEC--CEEEEEEEEeCCCCEEEEEcC-EEEECCCcch
Confidence 3345444445789999999999999876 6888998883 5766789995 7999999754
No 41
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=81.98 E-value=0.7 Score=50.26 Aligned_cols=53 Identities=23% Similarity=0.251 Sum_probs=42.0
Q ss_pred cCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEECCEEEEEEeeeEEEecCCCCCCHHHHH
Q psy14643 436 RNRPNLHISLNSQVTRVLIDSESKKAYGVEFVKNGKKRIVFARKEIILSAGAINTPHILM 495 (801)
Q Consensus 436 ~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~~g~~~~v~A~k~VILaAGai~SprLLl 495 (801)
..+.+.+|++++.|++|..++ ++++||.. +|+ ++.|+ .||+|+++-.+.+||-
T Consensus 206 ~~~~G~~i~~~~~V~~i~~~~--~~~~gv~~--~g~--~~~ad-~VV~a~~~~~~~~ll~ 258 (425)
T 3ka7_A 206 ISANGGKIHTGQEVSKILIEN--GKAAGIIA--DDR--IHDAD-LVISNLGHAATAVLCS 258 (425)
T ss_dssp HHHTTCEEECSCCEEEEEEET--TEEEEEEE--TTE--EEECS-EEEECSCHHHHHHHTT
T ss_pred HHHcCCEEEECCceeEEEEEC--CEEEEEEE--CCE--EEECC-EEEECCCHHHHHHhcC
Confidence 345689999999999999876 57888865 354 57785 6999999988887654
No 42
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=81.24 E-value=0.87 Score=52.83 Aligned_cols=50 Identities=14% Similarity=0.211 Sum_probs=41.6
Q ss_pred CeEEeeCceEEEEEeeCC-CCeEEEEEEEE--CCEEEEEEeeeEEEecCCCCCC
Q psy14643 440 NLHISLNSQVTRVLIDSE-SKKAYGVEFVK--NGKKRIVFARKEIILSAGAINT 490 (801)
Q Consensus 440 nl~v~~~a~V~rI~~d~~-~~~a~gV~~~~--~g~~~~v~A~k~VILaAGai~S 490 (801)
|++|+.++.|+.|+.+++ .+++.||.+.. +|+.+.+.|+ .||||+|.+..
T Consensus 182 gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak-~VVLATGG~g~ 234 (662)
T 3gyx_A 182 QDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKAN-AMVVACGGAVN 234 (662)
T ss_dssp TTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECS-EEEECCCCBCS
T ss_pred CcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeC-EEEECCCcccc
Confidence 899999999999998763 14899998873 5778889995 79999998763
No 43
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=80.85 E-value=1.5 Score=48.24 Aligned_cols=52 Identities=13% Similarity=0.302 Sum_probs=40.5
Q ss_pred ccCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEECCEEEEEEeeeEEEecCCCCCCHH
Q psy14643 435 VRNRPNLHISLNSQVTRVLIDSESKKAYGVEFVKNGKKRIVFARKEIILSAGAINTPH 492 (801)
Q Consensus 435 ~~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~~g~~~~v~A~k~VILaAGai~Spr 492 (801)
.+.+.+++|++++.|++|..++ +++.+|++. +|+ +++|+ .||+|+|+...|.
T Consensus 143 ~~~~~GV~i~~~~~V~~i~~~~--~~v~~V~~~-~G~--~i~Ad-~VVlAtGg~s~~~ 194 (447)
T 2i0z_A 143 RLKDLGVKIRTNTPVETIEYEN--GQTKAVILQ-TGE--VLETN-HVVIAVGGKSVPQ 194 (447)
T ss_dssp HHHHTTCEEECSCCEEEEEEET--TEEEEEEET-TCC--EEECS-CEEECCCCSSSGG
T ss_pred HHHHCCCEEEeCcEEEEEEecC--CcEEEEEEC-CCC--EEECC-EEEECCCCCcCCC
Confidence 3445789999999999999865 567777764 453 58885 6999999988764
No 44
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=80.55 E-value=1.6 Score=50.64 Aligned_cols=50 Identities=20% Similarity=0.193 Sum_probs=41.1
Q ss_pred Ce-EEeeCceEEEEEeeCC-CCeEEEEEEE--ECCEEEEEEeeeEEEecCCCCCC
Q psy14643 440 NL-HISLNSQVTRVLIDSE-SKKAYGVEFV--KNGKKRIVFARKEIILSAGAINT 490 (801)
Q Consensus 440 nl-~v~~~a~V~rI~~d~~-~~~a~gV~~~--~~g~~~~v~A~k~VILaAGai~S 490 (801)
|+ +|+.++.|++|+.+++ .++++||.+. .+|+..++.| +.||||+|....
T Consensus 166 gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A-~~VVlAtGG~~~ 219 (643)
T 1jnr_A 166 GEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKA-KAVILATGGATL 219 (643)
T ss_dssp CGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEEC-SEEEECCCCBCS
T ss_pred CCcEEEecCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEc-CEEEECCCcccc
Confidence 89 9999999999998752 1389999876 3577778999 579999999875
No 45
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=80.54 E-value=2 Score=47.31 Aligned_cols=56 Identities=7% Similarity=0.130 Sum_probs=43.8
Q ss_pred hhccccCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEE--CCEEEEEEeeeEEEecCCCCC
Q psy14643 431 YIEPVRNRPNLHISLNSQVTRVLIDSESKKAYGVEFVK--NGKKRIVFARKEIILSAGAIN 489 (801)
Q Consensus 431 ~L~~~~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~--~g~~~~v~A~k~VILaAGai~ 489 (801)
.|...+.+.+++|+.+++|++|..++ ++++||.+.. +|+..++.|+ .||.|.|+-.
T Consensus 105 ~L~~~a~~~gv~i~~~~~v~~i~~~~--~~v~gv~~~~~~~G~~~~~~ad-~VV~AdG~~s 162 (453)
T 3atr_A 105 RVLKEAQDRGVEIWDLTTAMKPIFED--GYVKGAVLFNRRTNEELTVYSK-VVVEATGYSR 162 (453)
T ss_dssp HHHHHHHHTTCEEESSEEEEEEEEET--TEEEEEEEEETTTTEEEEEECS-EEEECCGGGC
T ss_pred HHHHHHHHcCCEEEeCcEEEEEEEEC--CEEEEEEEEEcCCCceEEEEcC-EEEECcCCch
Confidence 44333445789999999999998876 5788998875 6777789995 7999999743
No 46
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=80.30 E-value=0.98 Score=48.28 Aligned_cols=57 Identities=18% Similarity=0.218 Sum_probs=42.0
Q ss_pred ccCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEECCEEEEEEeeeEEEecCCCCCCHHHHHhhCC
Q psy14643 435 VRNRPNLHISLNSQVTRVLIDSESKKAYGVEFVKNGKKRIVFARKEIILSAGAINTPHILMHSGV 499 (801)
Q Consensus 435 ~~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~~g~~~~v~A~k~VILaAGai~SprLLl~SGI 499 (801)
.+.+.+++|+.++.|++|..++ +++++|+.. +| +++|+ .||+|+|+. |+.|+...|+
T Consensus 158 ~~~~~Gv~i~~~~~v~~i~~~~--~~v~gv~~~-~g---~i~a~-~VV~A~G~~-s~~l~~~~g~ 214 (382)
T 1y56_B 158 KAKEYGAKLLEYTEVKGFLIEN--NEIKGVKTN-KG---IIKTG-IVVNATNAW-ANLINAMAGI 214 (382)
T ss_dssp HHHHTTCEEECSCCEEEEEESS--SBEEEEEET-TE---EEECS-EEEECCGGG-HHHHHHHHTC
T ss_pred HHHHCCCEEECCceEEEEEEEC--CEEEEEEEC-Cc---EEECC-EEEECcchh-HHHHHHHcCC
Confidence 3445689999999999998865 567777642 33 68896 699999975 6666665553
No 47
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=78.07 E-value=1.3 Score=48.61 Aligned_cols=59 Identities=14% Similarity=0.290 Sum_probs=41.3
Q ss_pred ccCCCCeEEeeCceEEEEEeeC-------------CCCeEEEEEEEECCEEEEE--EeeeEEEecCCCCCCHHHHHhhCC
Q psy14643 435 VRNRPNLHISLNSQVTRVLIDS-------------ESKKAYGVEFVKNGKKRIV--FARKEIILSAGAINTPHILMHSGV 499 (801)
Q Consensus 435 ~~~~~nl~v~~~a~V~rI~~d~-------------~~~~a~gV~~~~~g~~~~v--~A~k~VILaAGai~SprLLl~SGI 499 (801)
.+.+.+++|+.+++|++|..+. +++++.+|+.. +| ++ .|+ .||+|+|+. |++|+-..|+
T Consensus 190 ~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~-~g---~i~~~Ad-~VV~AtG~~-s~~l~~~~g~ 263 (448)
T 3axb_A 190 RASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLS-DG---TRVEVGE-KLVVAAGVW-SNRLLNPLGI 263 (448)
T ss_dssp HHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEET-TS---CEEEEEE-EEEECCGGG-HHHHHGGGTC
T ss_pred HHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeC-CC---EEeecCC-EEEECCCcC-HHHHHHHcCC
Confidence 3345689999999999998730 12456666542 44 46 885 699999985 7777765553
No 48
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=76.52 E-value=5.3 Score=40.98 Aligned_cols=65 Identities=23% Similarity=0.361 Sum_probs=50.5
Q ss_pred hhccccCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEE--CCEEEEEEeeeEEEecCCCCCCHHHHHhhCC
Q psy14643 431 YIEPVRNRPNLHISLNSQVTRVLIDSESKKAYGVEFVK--NGKKRIVFARKEIILSAGAINTPHILMHSGV 499 (801)
Q Consensus 431 ~L~~~~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~--~g~~~~v~A~k~VILaAGai~SprLLl~SGI 499 (801)
++..+.++.++++++++.|++|.-+ +++.+|++.. +|+..++.++ .||+|.|..-+..+|..+|+
T Consensus 195 ~~~~~~~~~gv~~~~~~~v~~i~~~---~~~~~v~~~~~~~g~~~~~~~D-~vv~a~G~~p~~~~~~~~g~ 261 (323)
T 3f8d_A 195 YVETVKKKPNVEFVLNSVVKEIKGD---KVVKQVVVENLKTGEIKELNVN-GVFIEIGFDPPTDFAKSNGI 261 (323)
T ss_dssp HHHHHHTCTTEEEECSEEEEEEEES---SSEEEEEEEETTTCCEEEEECS-EEEECCCEECCHHHHHHTTC
T ss_pred HHHHHHhCCCcEEEeCCEEEEEecc---CceeEEEEEECCCCceEEEEcC-EEEEEECCCCChhHHhhcCe
Confidence 4444455679999999999999754 3577788874 4777788896 79999998888788877775
No 49
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=74.83 E-value=2.3 Score=43.99 Aligned_cols=59 Identities=29% Similarity=0.510 Sum_probs=46.6
Q ss_pred CCCeEEeeCceEEEEEeeCCCCeEEEEEEEE--CCEEEEEEeeeEEEecCCCCCCHHHHHhhCC
Q psy14643 438 RPNLHISLNSQVTRVLIDSESKKAYGVEFVK--NGKKRIVFARKEIILSAGAINTPHILMHSGV 499 (801)
Q Consensus 438 ~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~--~g~~~~v~A~k~VILaAGai~SprLLl~SGI 499 (801)
+.++++++++.|++|.-++ +++.+|.+.. +|+..++.++ .||+|.|..-++.+|..+|+
T Consensus 202 ~~gv~i~~~~~v~~i~~~~--~~v~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~l~~~gl 262 (319)
T 3cty_A 202 KRNIPYIMNAQVTEIVGDG--KKVTGVKYKDRTTGEEKLIETD-GVFIYVGLIPQTSFLKDSGV 262 (319)
T ss_dssp HTTCCEECSEEEEEEEESS--SSEEEEEEEETTTCCEEEECCS-EEEECCCEEECCGGGTTSCC
T ss_pred cCCcEEEcCCeEEEEecCC--ceEEEEEEEEcCCCceEEEecC-EEEEeeCCccChHHHhhccc
Confidence 5689999999999998654 5688888874 6777788896 79999998777777665554
No 50
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=73.27 E-value=6.8 Score=41.18 Aligned_cols=61 Identities=18% Similarity=0.195 Sum_probs=44.3
Q ss_pred HHhhccccCCCCeEEeeCceEEEEEeeCC-----------------CCeEEEEEEEE-----CC------EEEEEEeeeE
Q psy14643 429 HAYIEPVRNRPNLHISLNSQVTRVLIDSE-----------------SKKAYGVEFVK-----NG------KKRIVFARKE 480 (801)
Q Consensus 429 ~~~L~~~~~~~nl~v~~~a~V~rI~~d~~-----------------~~~a~gV~~~~-----~g------~~~~v~A~k~ 480 (801)
..++..+.+.+|++|+.++.|+.|+.+++ +.++.||.+.. .+ ...+|.|+ .
T Consensus 164 ~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~Ak-~ 242 (344)
T 3jsk_A 164 STVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTINAP-V 242 (344)
T ss_dssp HHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEEECS-E
T ss_pred HHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCceEEEcC-E
Confidence 33444445558999999999999998762 23899998751 22 34689995 7
Q ss_pred EEecCCCCCC
Q psy14643 481 IILSAGAINT 490 (801)
Q Consensus 481 VILaAGai~S 490 (801)
||+|.|.-..
T Consensus 243 VV~ATG~~s~ 252 (344)
T 3jsk_A 243 IISTTGHDGP 252 (344)
T ss_dssp EEECCCSSSS
T ss_pred EEECCCCCch
Confidence 9999997554
No 51
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=73.08 E-value=3 Score=46.54 Aligned_cols=54 Identities=19% Similarity=0.154 Sum_probs=42.9
Q ss_pred CCCCeEEeeCceEEEEEeeCCCCeEEEEEEEE--CCEEEEEEeeeEEEecCCCCCCHHHHH
Q psy14643 437 NRPNLHISLNSQVTRVLIDSESKKAYGVEFVK--NGKKRIVFARKEIILSAGAINTPHILM 495 (801)
Q Consensus 437 ~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~--~g~~~~v~A~k~VILaAGai~SprLLl 495 (801)
.+.+++|+.+++|++|..++ ++.+|++.. +|+..+++|+ .||+|+|+. +.+|+.
T Consensus 160 ~~~Gv~i~~~~~V~~l~~~~---~~~~V~~~d~~~G~~~~i~A~-~VV~AtG~~-s~~l~~ 215 (501)
T 2qcu_A 160 VRKGGEVLTRTRATSARREN---GLWIVEAEDIDTGKKYSWQAR-GLVNATGPW-VKQFFD 215 (501)
T ss_dssp HHTTCEEECSEEEEEEEEET---TEEEEEEEETTTCCEEEEEES-CEEECCGGG-HHHHHH
T ss_pred HHcCCEEEcCcEEEEEEEeC---CEEEEEEEECCCCCEEEEECC-EEEECCChh-HHHHHH
Confidence 35689999999999999865 477888763 5777789995 799999985 667665
No 52
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=72.19 E-value=2.6 Score=44.68 Aligned_cols=55 Identities=18% Similarity=0.085 Sum_probs=39.4
Q ss_pred cCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEECCEEEEEEeeeEEEecCCCCCCHHHHHhhCC
Q psy14643 436 RNRPNLHISLNSQVTRVLIDSESKKAYGVEFVKNGKKRIVFARKEIILSAGAINTPHILMHSGV 499 (801)
Q Consensus 436 ~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~~g~~~~v~A~k~VILaAGai~SprLLl~SGI 499 (801)
+.+.+++|+.++.|++|..+++ + .+| ...+. ++.|+ .||+|+|+ .|++|+...|+
T Consensus 164 a~~~Gv~i~~~~~V~~i~~~~~--~-~~V--~t~~g--~i~a~-~VV~A~G~-~s~~l~~~~g~ 218 (381)
T 3nyc_A 164 IRRNQGQVLCNHEALEIRRVDG--A-WEV--RCDAG--SYRAA-VLVNAAGA-WCDAIAGLAGV 218 (381)
T ss_dssp HHHTTCEEESSCCCCEEEEETT--E-EEE--ECSSE--EEEES-EEEECCGG-GHHHHHHHHTC
T ss_pred HHHCCCEEEcCCEEEEEEEeCC--e-EEE--EeCCC--EEEcC-EEEECCCh-hHHHHHHHhCC
Confidence 3456899999999999998763 3 333 32233 68885 69999997 47777766554
No 53
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=72.01 E-value=4.1 Score=43.58 Aligned_cols=54 Identities=19% Similarity=0.276 Sum_probs=37.1
Q ss_pred cCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEECCEEEEEEeeeEEEecCCCCCCHHHHHhhC
Q psy14643 436 RNRPNLHISLNSQVTRVLIDSESKKAYGVEFVKNGKKRIVFARKEIILSAGAINTPHILMHSG 498 (801)
Q Consensus 436 ~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~~g~~~~v~A~k~VILaAGai~SprLLl~SG 498 (801)
+.+.+++|+.++.|++|..+++ . |.+..++. ++.|+ .||+|+|+ .+++|+-..|
T Consensus 163 a~~~Gv~i~~~~~V~~i~~~~~--~---v~v~t~~g--~i~a~-~VV~A~G~-~s~~l~~~~g 216 (397)
T 2oln_A 163 AQAAGATLRAGETVTELVPDAD--G---VSVTTDRG--TYRAG-KVVLACGP-YTNDLLEPLG 216 (397)
T ss_dssp HHHTTCEEEESCCEEEEEEETT--E---EEEEESSC--EEEEE-EEEECCGG-GHHHHHGGGT
T ss_pred HHHcCCEEECCCEEEEEEEcCC--e---EEEEECCC--EEEcC-EEEEcCCc-ChHHHhhhcC
Confidence 3456899999999999998753 3 33343332 58885 69999998 4566654433
No 54
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=71.37 E-value=3.3 Score=44.89 Aligned_cols=64 Identities=16% Similarity=0.306 Sum_probs=49.0
Q ss_pred hhccccCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEECCEEEEEEeeeEEEecCCCCCCHHHHHhhCCC
Q psy14643 431 YIEPVRNRPNLHISLNSQVTRVLIDSESKKAYGVEFVKNGKKRIVFARKEIILSAGAINTPHILMHSGVG 500 (801)
Q Consensus 431 ~L~~~~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~~g~~~~v~A~k~VILaAGai~SprLLl~SGIG 500 (801)
++....++.+++|++++.|++|..++ +++++|++. +|+ ++.++ .||+|+|..-+..+|..+|+-
T Consensus 199 ~l~~~l~~~GV~i~~~~~v~~i~~~~--~~v~~v~l~-dG~--~i~aD-~Vv~a~G~~p~~~l~~~~gl~ 262 (415)
T 3lxd_A 199 FYQAEHRAHGVDLRTGAAMDCIEGDG--TKVTGVRMQ-DGS--VIPAD-IVIVGIGIVPCVGALISAGAS 262 (415)
T ss_dssp HHHHHHHHTTCEEEETCCEEEEEESS--SBEEEEEES-SSC--EEECS-EEEECSCCEESCHHHHHTTCC
T ss_pred HHHHHHHhCCCEEEECCEEEEEEecC--CcEEEEEeC-CCC--EEEcC-EEEECCCCccChHHHHhCCCC
Confidence 34344456799999999999998654 578888775 453 57786 799999998888888888764
No 55
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=71.08 E-value=3.1 Score=44.96 Aligned_cols=64 Identities=14% Similarity=0.330 Sum_probs=49.1
Q ss_pred hhccccCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEECCEEEEEEeeeEEEecCCCCCCHHHHHhhCCC
Q psy14643 431 YIEPVRNRPNLHISLNSQVTRVLIDSESKKAYGVEFVKNGKKRIVFARKEIILSAGAINTPHILMHSGVG 500 (801)
Q Consensus 431 ~L~~~~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~~g~~~~v~A~k~VILaAGai~SprLLl~SGIG 500 (801)
++....++.++++++++.|++|..++ +++.+|++. +|+ ++.++ .||+|+|..-+..+|..+|+-
T Consensus 189 ~l~~~l~~~GV~i~~~~~v~~i~~~~--~~v~~V~~~-dG~--~i~aD-~Vv~a~G~~p~~~l~~~~gl~ 252 (404)
T 3fg2_P 189 YFHDRHSGAGIRMHYGVRATEIAAEG--DRVTGVVLS-DGN--TLPCD-LVVVGVGVIPNVEIAAAAGLP 252 (404)
T ss_dssp HHHHHHHHTTCEEECSCCEEEEEEET--TEEEEEEET-TSC--EEECS-EEEECCCEEECCHHHHHTTCC
T ss_pred HHHHHHHhCCcEEEECCEEEEEEecC--CcEEEEEeC-CCC--EEEcC-EEEECcCCccCHHHHHhCCCC
Confidence 34344456799999999999998765 577787765 454 57786 799999998887888888874
No 56
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=71.03 E-value=3.8 Score=42.47 Aligned_cols=58 Identities=10% Similarity=0.125 Sum_probs=45.4
Q ss_pred ccCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEE--CCEEEEEEeeeEEEecCCCCCCHHHHH
Q psy14643 435 VRNRPNLHISLNSQVTRVLIDSESKKAYGVEFVK--NGKKRIVFARKEIILSAGAINTPHILM 495 (801)
Q Consensus 435 ~~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~--~g~~~~v~A~k~VILaAGai~SprLLl 495 (801)
+.+..++++++++.|.+|.-++ +++++|++.. +|+..++.++ .||+|.|..-++.+|.
T Consensus 218 l~~~~gv~i~~~~~v~~i~~~~--~~~~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~~~ 277 (338)
T 3itj_A 218 AEKNEKIEILYNTVALEAKGDG--KLLNALRIKNTKKNEETDLPVS-GLFYAIGHTPATKIVA 277 (338)
T ss_dssp HHHCTTEEEECSEEEEEEEESS--SSEEEEEEEETTTTEEEEEECS-EEEECSCEEECCGGGB
T ss_pred HHhcCCeEEeecceeEEEEccc--CcEEEEEEEECCCCceEEEEeC-EEEEEeCCCCChhHhh
Confidence 3345699999999999998655 5688898885 5667788996 7999999876665543
No 57
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=70.06 E-value=3.7 Score=46.91 Aligned_cols=56 Identities=13% Similarity=0.132 Sum_probs=43.5
Q ss_pred HHhhccccCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEECCEEEEEEeeeEEEecCCC
Q psy14643 429 HAYIEPVRNRPNLHISLNSQVTRVLIDSESKKAYGVEFVKNGKKRIVFARKEIILSAGA 487 (801)
Q Consensus 429 ~~~L~~~~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~~g~~~~v~A~k~VILaAGa 487 (801)
..+|...+.+.|++|+.+++|++|..++ +.+.+|.+..+|...++.|+ .||.|.|+
T Consensus 131 ~~~L~~~a~~~Gv~i~~g~~V~~v~~~~--g~~~~V~~~~~G~~~~i~Ad-lVV~AdG~ 186 (591)
T 3i3l_A 131 DKLLLDEARSRGITVHEETPVTDVDLSD--PDRVVLTVRRGGESVTVESD-FVIDAGGS 186 (591)
T ss_dssp HHHHHHHHHHTTCEEETTCCEEEEECCS--TTCEEEEEEETTEEEEEEES-EEEECCGG
T ss_pred HHHHHHHHHhCCCEEEeCCEEEEEEEcC--CCEEEEEEecCCceEEEEcC-EEEECCCC
Confidence 3345444455799999999999998864 45677877767877889995 79999997
No 58
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=69.30 E-value=5.9 Score=44.41 Aligned_cols=67 Identities=16% Similarity=0.171 Sum_probs=47.1
Q ss_pred hhccccCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEECCEEEEEEeeeEEEecCCCCCCHH-HHHhhCC
Q psy14643 431 YIEPVRNRPNLHISLNSQVTRVLIDSESKKAYGVEFVKNGKKRIVFARKEIILSAGAINTPH-ILMHSGV 499 (801)
Q Consensus 431 ~L~~~~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~~g~~~~v~A~k~VILaAGai~Spr-LLl~SGI 499 (801)
++....++.+++|++++.|++|..+++ +++.++.+...+...++.++ .||+|+|..-+.. +|..+|+
T Consensus 260 ~l~~~l~~~GV~i~~~~~V~~i~~~~~-~~v~~~~v~~~~G~~~i~aD-~Vv~A~G~~p~~~~~l~~~gl 327 (523)
T 1mo9_A 260 YVLDRMKEQGMEIISGSNVTRIEEDAN-GRVQAVVAMTPNGEMRIETD-FVFLGLGEQPRSAELAKILGL 327 (523)
T ss_dssp HHHHHHHHTTCEEESSCEEEEEEECTT-SBEEEEEEEETTEEEEEECS-CEEECCCCEECCHHHHHHHTC
T ss_pred HHHHHHHhCCcEEEECCEEEEEEEcCC-CceEEEEEEECCCcEEEEcC-EEEECcCCccCCccCHHHcCC
Confidence 333344567999999999999986543 45666666543333468886 6999999887666 6777776
No 59
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=68.89 E-value=3.1 Score=47.74 Aligned_cols=47 Identities=21% Similarity=0.408 Sum_probs=35.6
Q ss_pred CCCeEEeeCceEEEEEeeCCCCeEEEEEEEECCEEEEEEeeeEEEecCCCCCCH
Q psy14643 438 RPNLHISLNSQVTRVLIDSESKKAYGVEFVKNGKKRIVFARKEIILSAGAINTP 491 (801)
Q Consensus 438 ~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~~g~~~~v~A~k~VILaAGai~Sp 491 (801)
.+|++| .++.|+.|..++ +++.+|... +| .++.|+ .||+|+|+.-..
T Consensus 137 ~~GV~I-~~~~V~~L~~e~--g~V~GV~t~-dG--~~I~Ad-~VVLATGt~s~~ 183 (651)
T 3ces_A 137 QPNLMI-FQQAVEDLIVEN--DRVVGAVTQ-MG--LKFRAK-AVVLTVGTFLDG 183 (651)
T ss_dssp CTTEEE-EECCEEEEEESS--SBEEEEEET-TS--EEEEEE-EEEECCSTTTCC
T ss_pred CCCCEE-EEEEEEEEEecC--CEEEEEEEC-CC--CEEECC-EEEEcCCCCccC
Confidence 379999 467999998765 578888764 45 367884 799999986443
No 60
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=68.64 E-value=2.1 Score=48.99 Aligned_cols=49 Identities=18% Similarity=0.331 Sum_probs=36.9
Q ss_pred CCCeEEeeCceEEEEEeeCCCCeEEEEEEEECCEEEEEEeeeEEEecCCCCCCHHH
Q psy14643 438 RPNLHISLNSQVTRVLIDSESKKAYGVEFVKNGKKRIVFARKEIILSAGAINTPHI 493 (801)
Q Consensus 438 ~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~~g~~~~v~A~k~VILaAGai~SprL 493 (801)
.+|++|+ ++.|+.|..++ +++.||... +|. ++.|+ .||||+|+.-..++
T Consensus 136 ~~GVeI~-~~~Vt~L~~e~--g~V~GV~t~-dG~--~i~Ad-aVVLATG~~s~~~~ 184 (637)
T 2zxi_A 136 QENLYIK-QEEVVDIIVKN--NQVVGVRTN-LGV--EYKTK-AVVVTTGTFLNGVI 184 (637)
T ss_dssp CTTEEEE-ESCEEEEEESS--SBEEEEEET-TSC--EEECS-EEEECCTTCBTCEE
T ss_pred CCCCEEE-EeEEEEEEecC--CEEEEEEEC-CCc--EEEeC-EEEEccCCCccCce
Confidence 4799995 78999998865 578888764 453 57885 79999998754443
No 61
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=67.52 E-value=8 Score=40.61 Aligned_cols=60 Identities=15% Similarity=0.160 Sum_probs=45.4
Q ss_pred CCCCeEEeeCceEEEEEeeCCCCeEEEEEEE-ECCEEEEEEeeeEEEecCCCCCCHHHHHhhCC
Q psy14643 437 NRPNLHISLNSQVTRVLIDSESKKAYGVEFV-KNGKKRIVFARKEIILSAGAINTPHILMHSGV 499 (801)
Q Consensus 437 ~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~-~~g~~~~v~A~k~VILaAGai~SprLLl~SGI 499 (801)
++.++++++++.|++|..++ +++.+|.+. .+|+..++.++ .||+|.|..-++.+|..+|+
T Consensus 213 ~~~gv~i~~~~~v~~i~~~~--~~v~~v~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~l~~~~~ 273 (360)
T 3ab1_A 213 ANGTIDVYLETEVASIEESN--GVLTRVHLRSSDGSKWTVEAD-RLLILIGFKSNLGPLARWDL 273 (360)
T ss_dssp HHTSEEEESSEEEEEEEEET--TEEEEEEEEETTCCEEEEECS-EEEECCCBCCSCGGGGGSSC
T ss_pred hcCceEEEcCcCHHHhccCC--CceEEEEEEecCCCeEEEeCC-EEEECCCCCCCHHHHHhhcc
Confidence 45689999999999998764 567788876 35666778886 79999997665566655554
No 62
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=66.88 E-value=5.8 Score=40.61 Aligned_cols=56 Identities=27% Similarity=0.337 Sum_probs=43.5
Q ss_pred CCCCeEEeeCceEEEEEeeCCCCeEEEEEEEE--CCEEEEEEeeeEEEecCCCCCCHHHHH
Q psy14643 437 NRPNLHISLNSQVTRVLIDSESKKAYGVEFVK--NGKKRIVFARKEIILSAGAINTPHILM 495 (801)
Q Consensus 437 ~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~--~g~~~~v~A~k~VILaAGai~SprLLl 495 (801)
+..+++|++++.|++|.-++ +++.+|++.. +|+..++.++ .||+|.|..-++.+|.
T Consensus 191 ~~~gv~v~~~~~v~~i~~~~--~~v~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~l~ 248 (310)
T 1fl2_A 191 SLKNVDIILNAQTTEVKGDG--SKVVGLEYRDRVSGDIHNIELA-GIFVQIGLLPNTNWLE 248 (310)
T ss_dssp TCTTEEEESSEEEEEEEESS--SSEEEEEEEETTTCCEEEEECS-EEEECSCEEESCGGGT
T ss_pred hCCCeEEecCCceEEEEcCC--CcEEEEEEEECCCCcEEEEEcC-EEEEeeCCccCchHHh
Confidence 34799999999999997543 5688888875 4667788886 7999999876666553
No 63
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=66.36 E-value=3.7 Score=42.03 Aligned_cols=59 Identities=22% Similarity=0.227 Sum_probs=45.8
Q ss_pred cccCCCCeEEeeCceEEEEEeeCCCCeEEEEEEE-ECCEEEEEEeeeEEEecCCCCCCHHHHH
Q psy14643 434 PVRNRPNLHISLNSQVTRVLIDSESKKAYGVEFV-KNGKKRIVFARKEIILSAGAINTPHILM 495 (801)
Q Consensus 434 ~~~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~-~~g~~~~v~A~k~VILaAGai~SprLLl 495 (801)
.+.++.++++++++.|.+|.-++ +++.+|++. .+|+..++.++ .||+|.|..-++.+|.
T Consensus 191 ~~~~~~gv~~~~~~~v~~i~~~~--~~~~~v~~~~~~g~~~~~~~D-~vv~a~G~~p~~~~~~ 250 (315)
T 3r9u_A 191 KVKKNEKIELITSASVDEVYGDK--MGVAGVKVKLKDGSIRDLNVP-GIFTFVGLNVRNEILK 250 (315)
T ss_dssp HHHHCTTEEEECSCEEEEEEEET--TEEEEEEEECTTSCEEEECCS-CEEECSCEEECCGGGB
T ss_pred HHHhcCCeEEEeCcEEEEEEcCC--CcEEEEEEEcCCCCeEEeecC-eEEEEEcCCCCchhhh
Confidence 33457799999999999998665 578888887 35777788896 6999999776655543
No 64
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=66.06 E-value=7.9 Score=40.91 Aligned_cols=60 Identities=15% Similarity=0.246 Sum_probs=45.4
Q ss_pred hHHhhccccCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEECCEEEEEEeeeEEEecCCCCCCH
Q psy14643 428 YHAYIEPVRNRPNLHISLNSQVTRVLIDSESKKAYGVEFVKNGKKRIVFARKEIILSAGAINTP 491 (801)
Q Consensus 428 ~~~~L~~~~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~~g~~~~v~A~k~VILaAGai~Sp 491 (801)
...+|...+...+++++.++.|+.+..++ +++++|....++...+++|+ .||.|-| .+|.
T Consensus 104 ~~~~L~~~a~~~G~~~~~~~~v~~~~~~~--~~~~~v~~~~~~~~~~~~a~-~vIgAdG-~~S~ 163 (397)
T 3oz2_A 104 FDKHLAALAAKAGADVWVKSPALGVIKEN--GKVAGAKIRHNNEIVDVRAK-MVIAADG-FESE 163 (397)
T ss_dssp HHHHHHHHHHHHTCEEESSCCEEEEEEET--TEEEEEEEEETTEEEEEEEE-EEEECCC-TTCH
T ss_pred HHHHHHHHHHhcCcEEeeeeeeeeeeecc--ceeeeeeecccccceEEEEe-EEEeCCc-cccH
Confidence 33455444456789999999999999877 67889988888899999994 5666666 4554
No 65
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=66.00 E-value=2.6 Score=47.63 Aligned_cols=48 Identities=19% Similarity=0.323 Sum_probs=37.2
Q ss_pred cCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEECCEEEEEEeeeEEEecCCCCC
Q psy14643 436 RNRPNLHISLNSQVTRVLIDSESKKAYGVEFVKNGKKRIVFARKEIILSAGAIN 489 (801)
Q Consensus 436 ~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~~g~~~~v~A~k~VILaAGai~ 489 (801)
..+.+++|+.+++|++|..++ +++.+|++. +|+ ++.|+ .||+|.|+-.
T Consensus 230 l~~~Gv~I~~~t~V~~I~~~~--~~v~gV~l~-~G~--~i~Ad-~VVlA~G~~s 277 (549)
T 3nlc_A 230 IIELGGEIRFSTRVDDLHMED--GQITGVTLS-NGE--EIKSR-HVVLAVGHSA 277 (549)
T ss_dssp HHHTTCEEESSCCEEEEEESS--SBEEEEEET-TSC--EEECS-CEEECCCTTC
T ss_pred HHhcCCEEEeCCEEEEEEEeC--CEEEEEEEC-CCC--EEECC-EEEECCCCCh
Confidence 334689999999999999865 568888765 444 57885 6999999854
No 66
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=65.97 E-value=6.2 Score=40.41 Aligned_cols=59 Identities=12% Similarity=0.133 Sum_probs=45.4
Q ss_pred cCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEE--CCEEEEEEeeeEEEecCCCCCCHHHHHhh
Q psy14643 436 RNRPNLHISLNSQVTRVLIDSESKKAYGVEFVK--NGKKRIVFARKEIILSAGAINTPHILMHS 497 (801)
Q Consensus 436 ~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~--~g~~~~v~A~k~VILaAGai~SprLLl~S 497 (801)
.+..++++++++.|++|.-++ +++.+|++.. +|+..++.++ .||+|.|..-+..+|..+
T Consensus 189 ~~~~gv~v~~~~~v~~i~~~~--~~v~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~l~~~ 249 (311)
T 2q0l_A 189 KNNDKIEFLTPYVVEEIKGDA--SGVSSLSIKNTATNEKRELVVP-GFFIFVGYDVNNAVLKQE 249 (311)
T ss_dssp HTCTTEEEETTEEEEEEEEET--TEEEEEEEEETTTCCEEEEECS-EEEECSCEEECCGGGBCT
T ss_pred hhCCCeEEEeCCEEEEEECCC--CcEeEEEEEecCCCceEEEecC-EEEEEecCccChhhhhcc
Confidence 345799999999999998664 4677888874 6777788896 799999987665665444
No 67
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=64.41 E-value=5.1 Score=41.21 Aligned_cols=56 Identities=16% Similarity=0.181 Sum_probs=43.0
Q ss_pred cCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEE--C-CEEEEEEeeeEEEecCCCCCCHHHH
Q psy14643 436 RNRPNLHISLNSQVTRVLIDSESKKAYGVEFVK--N-GKKRIVFARKEIILSAGAINTPHIL 494 (801)
Q Consensus 436 ~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~--~-g~~~~v~A~k~VILaAGai~SprLL 494 (801)
+++.++++++++.|++|.-++ +++.+|++.. + |+..++.++ .||+|.|..-++.+|
T Consensus 194 l~~~gv~i~~~~~v~~i~~~~--~~v~~v~~~~~~~~g~~~~i~~D-~vv~a~G~~p~~~~~ 252 (320)
T 1trb_A 194 VENGNIILHTNRTLEEVTGDQ--MGVTGVRLRDTQNSDNIESLDVA-GLFVAIGHSPNTAIF 252 (320)
T ss_dssp HHTSSEEEECSCEEEEEEECS--SSEEEEEEECCTTCCCCEEEECS-EEEECSCEEESCGGG
T ss_pred cccCCeEEEcCceeEEEEcCC--CceEEEEEEeccCCCceEEEEcC-EEEEEeCCCCChHHh
Confidence 346799999999999998654 4688888874 2 555678886 799999977666554
No 68
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=64.10 E-value=4.4 Score=46.22 Aligned_cols=61 Identities=10% Similarity=0.179 Sum_probs=44.0
Q ss_pred HHhhccccCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEE-----CCEE-------EEEEeeeEEEecCCCCCCH
Q psy14643 429 HAYIEPVRNRPNLHISLNSQVTRVLIDSESKKAYGVEFVK-----NGKK-------RIVFARKEIILSAGAINTP 491 (801)
Q Consensus 429 ~~~L~~~~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~-----~g~~-------~~v~A~k~VILaAGai~Sp 491 (801)
..+|...+.+.+++|+.++.|++|+.+++ ++++||.+.. +|+. .++.|+ .||+|.|+-..-
T Consensus 147 ~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~-g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad-~VV~AdG~~S~v 219 (584)
T 2gmh_A 147 VSWMGEQAEALGVEVYPGYAAAEILFHED-GSVKGIATNDVGIQKDGAPKTTFERGLELHAK-VTIFAEGCHGHL 219 (584)
T ss_dssp HHHHHHHHHHTTCEEETTCCEEEEEECTT-SSEEEEEECCEEECTTSCEEEEEECCCEEECS-EEEECCCTTCHH
T ss_pred HHHHHHHHHHcCCEEEcCCEEEEEEEcCC-CCEEEEEeCCccccCCCCcccccCCceEEECC-EEEEeeCCCchH
Confidence 33554444455899999999999998764 5688887752 4433 478895 799999987653
No 69
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=63.90 E-value=6 Score=41.91 Aligned_cols=55 Identities=15% Similarity=0.154 Sum_probs=38.8
Q ss_pred ccCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEECCEEEEEEeeeEEEecCCCCCCHHHHHhhC
Q psy14643 435 VRNRPNLHISLNSQVTRVLIDSESKKAYGVEFVKNGKKRIVFARKEIILSAGAINTPHILMHSG 498 (801)
Q Consensus 435 ~~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~~g~~~~v~A~k~VILaAGai~SprLLl~SG 498 (801)
.+.+.+++|+.++.|++|..++ +++ +|.. .+. ++.|+ .||+|+|+. ++.|+...|
T Consensus 173 ~~~~~g~~i~~~~~v~~i~~~~--~~~-~v~~--~~g--~~~a~-~vV~A~G~~-s~~l~~~~~ 227 (382)
T 1ryi_A 173 AAKMLGAEIFEHTPVLHVERDG--EAL-FIKT--PSG--DVWAN-HVVVASGVW-SGMFFKQLG 227 (382)
T ss_dssp HHHHTTCEEETTCCCCEEECSS--SSE-EEEE--TTE--EEEEE-EEEECCGGG-THHHHHHTT
T ss_pred HHHHCCCEEEcCCcEEEEEEEC--CEE-EEEc--CCc--eEEcC-EEEECCChh-HHHHHHhcC
Confidence 3345689999999999998765 334 4433 333 67885 799999985 666665544
No 70
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=63.32 E-value=11 Score=39.32 Aligned_cols=57 Identities=14% Similarity=0.138 Sum_probs=39.8
Q ss_pred hhccccCCCCeEEeeCceEEEEEeeCC--CC--eEEEEEEEE-----CC------EEEEEEe--------------eeEE
Q psy14643 431 YIEPVRNRPNLHISLNSQVTRVLIDSE--SK--KAYGVEFVK-----NG------KKRIVFA--------------RKEI 481 (801)
Q Consensus 431 ~L~~~~~~~nl~v~~~a~V~rI~~d~~--~~--~a~gV~~~~-----~g------~~~~v~A--------------~k~V 481 (801)
++..+.+.+|++|+.++.|+.|+.+++ ++ +++||.+.. ++ ...++.| .+.|
T Consensus 152 L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~A~G~~~~~~~~~~~~~~~V 231 (326)
T 2gjc_A 152 VLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIELAGYKNDGTRDLSQKHGVI 231 (326)
T ss_dssp HHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCCCEEEEESCCCSSSCCCSSTTCCEE
T ss_pred HHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeecccccceeccCceEEEEeeccccccccccccCCEE
Confidence 333344557999999999999998752 14 899998751 22 3356888 2479
Q ss_pred EecCCC
Q psy14643 482 ILSAGA 487 (801)
Q Consensus 482 ILaAGa 487 (801)
|+|.|.
T Consensus 232 V~ATG~ 237 (326)
T 2gjc_A 232 LSTTGH 237 (326)
T ss_dssp EECCCC
T ss_pred EECcCC
Confidence 999994
No 71
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=63.21 E-value=4 Score=48.71 Aligned_cols=57 Identities=18% Similarity=0.206 Sum_probs=42.3
Q ss_pred ccCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEECCEEEEEEeeeEEEecCCCCCCHHHHHhhCC
Q psy14643 435 VRNRPNLHISLNSQVTRVLIDSESKKAYGVEFVKNGKKRIVFARKEIILSAGAINTPHILMHSGV 499 (801)
Q Consensus 435 ~~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~~g~~~~v~A~k~VILaAGai~SprLLl~SGI 499 (801)
.+.+.+++|+.++.|++|..++ +++++|+.. +| +++|+ .||+|+|+. |+.|+...|+
T Consensus 160 ~a~~~Gv~i~~~t~V~~i~~~~--~~v~~V~t~-~G---~i~Ad-~VV~AaG~~-s~~l~~~~g~ 216 (830)
T 1pj5_A 160 RTESAGVTYRGSTTVTGIEQSG--GRVTGVQTA-DG---VIPAD-IVVSCAGFW-GAKIGAMIGM 216 (830)
T ss_dssp HHHHTTCEEECSCCEEEEEEET--TEEEEEEET-TE---EEECS-EEEECCGGG-HHHHHHTTTC
T ss_pred HHHHcCCEEECCceEEEEEEeC--CEEEEEEEC-Cc---EEECC-EEEECCccc-hHHHHHHhCC
Confidence 3345689999999999999865 567676542 23 68895 699999985 6777766664
No 72
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=62.55 E-value=9.5 Score=39.39 Aligned_cols=62 Identities=19% Similarity=0.266 Sum_probs=46.3
Q ss_pred cCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEE--CCEEEEEEeeeEEEecCCCCCCHHHHHhhCC
Q psy14643 436 RNRPNLHISLNSQVTRVLIDSESKKAYGVEFVK--NGKKRIVFARKEIILSAGAINTPHILMHSGV 499 (801)
Q Consensus 436 ~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~--~g~~~~v~A~k~VILaAGai~SprLLl~SGI 499 (801)
.++.++++++++.|++|.-++++.++.+|++.. +|+..++.++ .||+|.|..-+..+|. +|+
T Consensus 205 ~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~~~-~~l 268 (333)
T 1vdc_A 205 LSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVS-GLFFAIGHEPATKFLD-GGV 268 (333)
T ss_dssp HTCTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECS-EEEECSCEEESCGGGT-TSS
T ss_pred HhCCCeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEecC-EEEEEeCCccchHHhh-ccc
Confidence 356799999999999998654222688888874 5666788896 7999999876666543 443
No 73
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=61.26 E-value=7.8 Score=42.00 Aligned_cols=54 Identities=13% Similarity=0.277 Sum_probs=38.7
Q ss_pred hhccccCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEECCEEEEEEeeeEEEecCCCCCCHH
Q psy14643 431 YIEPVRNRPNLHISLNSQVTRVLIDSESKKAYGVEFVKNGKKRIVFARKEIILSAGAINTPH 492 (801)
Q Consensus 431 ~L~~~~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~~g~~~~v~A~k~VILaAGai~Spr 492 (801)
.|.....+.+++|+++++|++|..+++ ++.+...+. ++.|+ .||+|+|+.-.|+
T Consensus 137 ~L~~~l~~~Gv~i~~~~~V~~i~~~~~-----~~~V~~~~g--~i~ad-~VIlAtG~~S~p~ 190 (417)
T 3v76_A 137 MLMAEMKEAGVQLRLETSIGEVERTAS-----GFRVTTSAG--TVDAA-SLVVASGGKSIPK 190 (417)
T ss_dssp HHHHHHHHHTCEEECSCCEEEEEEETT-----EEEEEETTE--EEEES-EEEECCCCSSCGG
T ss_pred HHHHHHHHCCCEEEECCEEEEEEEeCC-----EEEEEECCc--EEEee-EEEECCCCccCCC
Confidence 333344456899999999999988763 244443333 68885 7999999987775
No 74
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=60.21 E-value=8.7 Score=39.60 Aligned_cols=57 Identities=11% Similarity=0.219 Sum_probs=43.8
Q ss_pred ccCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEE--CCEEEEEEeeeEEEecCCCCCCHHHHH
Q psy14643 435 VRNRPNLHISLNSQVTRVLIDSESKKAYGVEFVK--NGKKRIVFARKEIILSAGAINTPHILM 495 (801)
Q Consensus 435 ~~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~--~g~~~~v~A~k~VILaAGai~SprLLl 495 (801)
+.+..+++|+++++|++|.-+ +++.+|++.. +|+..++.++ .||+|.|..-+..+|.
T Consensus 197 l~~~~gv~i~~~~~v~~i~~~---~~v~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~l~ 255 (325)
T 2q7v_A 197 AFANPKMKFIWDTAVEEIQGA---DSVSGVKLRNLKTGEVSELATD-GVFIFIGHVPNTAFVK 255 (325)
T ss_dssp HHTCTTEEEECSEEEEEEEES---SSEEEEEEEETTTCCEEEEECS-EEEECSCEEESCGGGT
T ss_pred HHhcCCceEecCCceEEEccC---CcEEEEEEEECCCCcEEEEEcC-EEEEccCCCCChHHHh
Confidence 334579999999999999853 3577888874 6777788896 7999999776655543
No 75
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=59.61 E-value=9 Score=40.58 Aligned_cols=52 Identities=17% Similarity=0.223 Sum_probs=36.0
Q ss_pred ccCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEECCEEEEEEeeeEEEecCCCCCCHHHHH
Q psy14643 435 VRNRPNLHISLNSQVTRVLIDSESKKAYGVEFVKNGKKRIVFARKEIILSAGAINTPHILM 495 (801)
Q Consensus 435 ~~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~~g~~~~v~A~k~VILaAGai~SprLLl 495 (801)
.+.+.+++|+.++.|++|..+++ . +.+..++. +++|+ .||+|+|+ .+..|+-
T Consensus 159 ~~~~~Gv~i~~~~~v~~i~~~~~--~---~~v~~~~g--~~~a~-~vV~A~G~-~~~~l~~ 210 (389)
T 2gf3_A 159 LAEARGAKVLTHTRVEDFDISPD--S---VKIETANG--SYTAD-KLIVSMGA-WNSKLLS 210 (389)
T ss_dssp HHHHTTCEEECSCCEEEEEECSS--C---EEEEETTE--EEEEE-EEEECCGG-GHHHHGG
T ss_pred HHHHCCCEEEcCcEEEEEEecCC--e---EEEEeCCC--EEEeC-EEEEecCc-cHHHHhh
Confidence 34456899999999999988653 2 23333443 58885 79999997 3555543
No 76
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=58.00 E-value=4.4 Score=47.09 Aligned_cols=52 Identities=12% Similarity=0.126 Sum_probs=36.2
Q ss_pred cCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEECCEEEEEEeeeEEEecCCCCCCHHHHH
Q psy14643 436 RNRPNLHISLNSQVTRVLIDSESKKAYGVEFVKNGKKRIVFARKEIILSAGAINTPHILM 495 (801)
Q Consensus 436 ~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~~g~~~~v~A~k~VILaAGai~SprLLl 495 (801)
+.+.+++|+.++.|++|..+++ ++ +|+.. +|. ++.|+ .||+|+|+. |+.|+.
T Consensus 427 a~~~Gv~i~~~t~V~~l~~~~~--~v-~V~t~-~G~--~i~Ad-~VVlAtG~~-s~~l~~ 478 (676)
T 3ps9_A 427 AQQQGLQIYYQYQLQNFSRKDD--CW-LLNFA-GDQ--QATHS-VVVLANGHQ-ISRFSQ 478 (676)
T ss_dssp HHHTTCEEEESCCEEEEEEETT--EE-EEEET-TSC--EEEES-EEEECCGGG-GGCSTT
T ss_pred HHhCCCEEEeCCeeeEEEEeCC--eE-EEEEC-CCC--EEECC-EEEECCCcc-hhcccc
Confidence 3456899999999999998763 32 33332 444 47885 699999985 555543
No 77
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=57.80 E-value=3.8 Score=44.31 Aligned_cols=50 Identities=16% Similarity=0.138 Sum_probs=37.6
Q ss_pred cCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEECCEEEEEEeeeEEEecCCCCCCHHHH
Q psy14643 436 RNRPNLHISLNSQVTRVLIDSESKKAYGVEFVKNGKKRIVFARKEIILSAGAINTPHIL 494 (801)
Q Consensus 436 ~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~~g~~~~v~A~k~VILaAGai~SprLL 494 (801)
....+.+|++++.|++|..++ +++ | ..+|+ ++.|+ .||+|+|+-.+++||
T Consensus 199 ~~~~G~~i~~~~~V~~i~~~~--~~v--V--~~~g~--~~~ad-~Vv~a~~~~~~~~ll 248 (421)
T 3nrn_A 199 IMENKGKILTRKEVVEINIEE--KKV--Y--TRDNE--EYSFD-VAISNVGVRETVKLI 248 (421)
T ss_dssp HHTTTCEEESSCCEEEEETTT--TEE--E--ETTCC--EEECS-EEEECSCHHHHHHHH
T ss_pred HHHCCCEEEcCCeEEEEEEEC--CEE--E--EeCCc--EEEeC-EEEECCCHHHHHHhc
Confidence 345689999999999998755 444 3 33453 57785 699999988777765
No 78
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=57.65 E-value=3.9 Score=47.73 Aligned_cols=53 Identities=11% Similarity=0.193 Sum_probs=35.9
Q ss_pred cCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEECCEEEEEEeeeEEEecCCCCCCHHHHH
Q psy14643 436 RNRPNLHISLNSQVTRVLIDSESKKAYGVEFVKNGKKRIVFARKEIILSAGAINTPHILM 495 (801)
Q Consensus 436 ~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~~g~~~~v~A~k~VILaAGai~SprLLl 495 (801)
+.+.+++|+.++.|++|..+++ + ..|+.. +|. .++.|+ .||+|+|+. ++.|+.
T Consensus 422 a~~~Gv~i~~~t~V~~l~~~~~--~-v~V~t~-~G~-~~i~Ad-~VVlAtG~~-s~~l~~ 474 (689)
T 3pvc_A 422 AQQNGMTCHYQHELQRLKRIDS--Q-WQLTFG-QSQ-AAKHHA-TVILATGHR-LPEWEQ 474 (689)
T ss_dssp HHHTTCEEEESCCEEEEEECSS--S-EEEEEC--CC-CCEEES-EEEECCGGG-TTCSTT
T ss_pred HHhCCCEEEeCCeEeEEEEeCC--e-EEEEeC-CCc-EEEECC-EEEECCCcc-hhcccc
Confidence 3456899999999999998764 2 234332 332 147785 699999986 555543
No 79
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=55.93 E-value=10 Score=40.75 Aligned_cols=54 Identities=22% Similarity=0.203 Sum_probs=38.4
Q ss_pred hhccccCCCCeEEeeCceEEEEEeeCCCCeEEEEEEE-ECCEEEEEEeeeEEEecCCCC
Q psy14643 431 YIEPVRNRPNLHISLNSQVTRVLIDSESKKAYGVEFV-KNGKKRIVFARKEIILSAGAI 488 (801)
Q Consensus 431 ~L~~~~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~-~~g~~~~v~A~k~VILaAGai 488 (801)
+|...+.+.+++|+.+++|++|..+++ +.. |.+. .+|+..++.|+ .||+|.|.-
T Consensus 111 ~L~~~a~~~gv~i~~~~~v~~i~~~~~-~~~--v~v~~~~g~~~~~~a~-~vV~A~G~~ 165 (421)
T 3nix_A 111 TLADEAARQGVDVEYEVGVTDIKFFGT-DSV--TTIEDINGNKREIEAR-FIIDASGYG 165 (421)
T ss_dssp HHHHHHHHHTCEEECSEEEEEEEEETT-EEE--EEEEETTSCEEEEEEE-EEEECCGGG
T ss_pred HHHHHHHhCCCEEEcCCEEEEEEEeCC-EEE--EEEEcCCCCEEEEEcC-EEEECCCCc
Confidence 443333445899999999999998764 222 4444 46777789995 799999954
No 80
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=54.56 E-value=10 Score=37.15 Aligned_cols=48 Identities=19% Similarity=0.344 Sum_probs=34.9
Q ss_pred CCCeEEeeCceEEEEEeeCCCCeEEEEEEEECCEEEEEEeeeEEEecCCCCCCHH
Q psy14643 438 RPNLHISLNSQVTRVLIDSESKKAYGVEFVKNGKKRIVFARKEIILSAGAINTPH 492 (801)
Q Consensus 438 ~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~~g~~~~v~A~k~VILaAGai~Spr 492 (801)
.++++++ +++|++|..++ +++.+|... +|+ ++.|+ .||+|+|+.-..+
T Consensus 81 ~~gv~i~-~~~v~~i~~~~--~~v~~v~~~-~g~--~i~a~-~VV~A~G~~s~~~ 128 (232)
T 2cul_A 81 LRPLHLF-QATATGLLLEG--NRVVGVRTW-EGP--PARGE-KVVLAVGSFLGAR 128 (232)
T ss_dssp CTTEEEE-ECCEEEEEEET--TEEEEEEET-TSC--CEECS-EEEECCTTCSSCE
T ss_pred CCCcEEE-EeEEEEEEEeC--CEEEEEEEC-CCC--EEECC-EEEECCCCChhhc
Confidence 3599999 57999998876 567677653 453 57885 7999999854433
No 81
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=53.80 E-value=5.6 Score=43.97 Aligned_cols=47 Identities=17% Similarity=0.266 Sum_probs=36.2
Q ss_pred CCCCeEEeeCceEEEEEeeCCCCeEEEEEEEECCEEEEEEeeeEEEecCCCCC
Q psy14643 437 NRPNLHISLNSQVTRVLIDSESKKAYGVEFVKNGKKRIVFARKEIILSAGAIN 489 (801)
Q Consensus 437 ~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~~g~~~~v~A~k~VILaAGai~ 489 (801)
++.|++|+.++.| +|+.++ +++.||.+...+. ++.| +.||||+|+..
T Consensus 130 ~~~gv~i~~~~~v-~l~~~~--~~v~Gv~v~~~~g--~~~a-~~VVlAtGg~~ 176 (472)
T 2e5v_A 130 REEGIPIIEDRLV-EIRVKD--GKVTGFVTEKRGL--VEDV-DKLVLATGGYS 176 (472)
T ss_dssp HHTTCCEECCCEE-EEEEET--TEEEEEEETTTEE--ECCC-SEEEECCCCCG
T ss_pred HhCCCEEEECcEE-EEEEeC--CEEEEEEEEeCCC--eEEe-eeEEECCCCCc
Confidence 5679999999999 998875 6888988753222 3567 47999999864
No 82
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=52.26 E-value=15 Score=40.94 Aligned_cols=54 Identities=31% Similarity=0.404 Sum_probs=42.8
Q ss_pred CCCeEEeeCceEEEEEeeCCCCeEEEEEEEE--CCEEEEEEeeeEEEecCCCCCCHHHH
Q psy14643 438 RPNLHISLNSQVTRVLIDSESKKAYGVEFVK--NGKKRIVFARKEIILSAGAINTPHIL 494 (801)
Q Consensus 438 ~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~--~g~~~~v~A~k~VILaAGai~SprLL 494 (801)
.+|++|++++.|++|.-++ +++++|.+.. +|+..++.++ .||+|.|..-+..+|
T Consensus 403 ~~gV~v~~~~~v~~i~~~~--~~v~~v~~~~~~~g~~~~i~~D-~vi~a~G~~pn~~~l 458 (521)
T 1hyu_A 403 LKNVDIILNAQTTEVKGDG--SKVVGLEYRDRVSGDIHSVALA-GIFVQIGLLPNTHWL 458 (521)
T ss_dssp CTTEEEECSEEEEEEEECS--SSEEEEEEEETTTCCEEEEECS-EEEECCCEEESCGGG
T ss_pred CCCcEEEeCCEEEEEEcCC--CcEEEEEEEeCCCCceEEEEcC-EEEECcCCCCCchHH
Confidence 3799999999999997543 5788999885 4777788896 699999977555554
No 83
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=52.16 E-value=7 Score=43.14 Aligned_cols=48 Identities=19% Similarity=0.356 Sum_probs=35.2
Q ss_pred cCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEECCEEEEEEeeeEEEecCCCC
Q psy14643 436 RNRPNLHISLNSQVTRVLIDSESKKAYGVEFVKNGKKRIVFARKEIILSAGAI 488 (801)
Q Consensus 436 ~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~~g~~~~v~A~k~VILaAGai 488 (801)
....+.+|++++.|++|+.+++ ++++||+.. +|+ +++|+ .||+++|-+
T Consensus 266 ~~~~Gg~i~l~t~V~~I~~d~~-g~v~gV~~~-~G~--~i~Ad-~VI~a~~~~ 313 (475)
T 3p1w_A 266 CAINGGTFMLNKNVVDFVFDDD-NKVCGIKSS-DGE--IAYCD-KVICDPSYV 313 (475)
T ss_dssp HHHC--CEESSCCEEEEEECTT-SCEEEEEET-TSC--EEEEE-EEEECGGGC
T ss_pred HHHcCCEEEeCCeEEEEEEecC-CeEEEEEEC-CCc--EEECC-EEEECCCcc
Confidence 4456899999999999998543 678898775 444 47785 699999865
No 84
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=51.46 E-value=15 Score=40.20 Aligned_cols=60 Identities=17% Similarity=0.277 Sum_probs=40.9
Q ss_pred HhhccccCCCCeEEeeCceEEEEEeeCCCCeEEEEEEE--EC-CEEEEEEeeeEEEecCCCCCCHH
Q psy14643 430 AYIEPVRNRPNLHISLNSQVTRVLIDSESKKAYGVEFV--KN-GKKRIVFARKEIILSAGAINTPH 492 (801)
Q Consensus 430 ~~L~~~~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~--~~-g~~~~v~A~k~VILaAGai~Spr 492 (801)
.|+....++-+.+|+.+++|++|..+.++++...+.+. .. |+.+++.++ .||||.|+ +|+
T Consensus 131 ~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d-~lVlAtG~--~p~ 193 (463)
T 3s5w_A 131 DYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTR-ALVVSPGG--TPR 193 (463)
T ss_dssp HHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEES-EEEECCCC--EEC
T ss_pred HHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeC-EEEECCCC--CCC
Confidence 35554455556889999999999987433445444444 32 556688896 69999997 554
No 85
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=50.83 E-value=13 Score=38.91 Aligned_cols=50 Identities=20% Similarity=0.272 Sum_probs=33.9
Q ss_pred ccCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEECCEEEEEEeeeEEEecCCCCCCHHH
Q psy14643 435 VRNRPNLHISLNSQVTRVLIDSESKKAYGVEFVKNGKKRIVFARKEIILSAGAINTPHI 493 (801)
Q Consensus 435 ~~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~~g~~~~v~A~k~VILaAGai~SprL 493 (801)
.+.+.+++|+.++.|++|..+++ .+ .|+. .+| ++.|+ .||+|+|+. |++|
T Consensus 158 ~~~~~G~~i~~~~~V~~i~~~~~--~~-~v~~-~~g---~~~a~-~vV~a~G~~-s~~l 207 (372)
T 2uzz_A 158 LAKEAGCAQLFNCPVTAIRHDDD--GV-TIET-ADG---EYQAK-KAIVCAGTW-VKDL 207 (372)
T ss_dssp HHHHTTCEEECSCCEEEEEECSS--SE-EEEE-SSC---EEEEE-EEEECCGGG-GGGT
T ss_pred HHHHCCCEEEcCCEEEEEEEcCC--EE-EEEE-CCC---eEEcC-EEEEcCCcc-HHhh
Confidence 33456899999999999988653 22 2322 234 37885 799999974 4443
No 86
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=50.72 E-value=13 Score=39.86 Aligned_cols=56 Identities=16% Similarity=0.239 Sum_probs=38.6
Q ss_pred hhccccCCCCeEEeeCceEEEEEeeCC--CCeEEEEEEEECCEEEEEEeeeEEEecCCCCCCHH
Q psy14643 431 YIEPVRNRPNLHISLNSQVTRVLIDSE--SKKAYGVEFVKNGKKRIVFARKEIILSAGAINTPH 492 (801)
Q Consensus 431 ~L~~~~~~~nl~v~~~a~V~rI~~d~~--~~~a~gV~~~~~g~~~~v~A~k~VILaAGai~Spr 492 (801)
+|....++.+++|++++.|++|..+++ +++ +.+..++. ++.|+ .||+|+|+...|+
T Consensus 114 ~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~---~~v~~~~g--~i~ad-~VVlAtG~~s~p~ 171 (401)
T 2gqf_A 114 MLKSECDKYGAKILLRSEVSQVERIQNDEKVR---FVLQVNST--QWQCK-NLIVATGGLSMPG 171 (401)
T ss_dssp HHHHHHHHHTCEEECSCCEEEEEECCSCSSCC---EEEEETTE--EEEES-EEEECCCCSSCGG
T ss_pred HHHHHHHHCCCEEEeCCEEEEEEcccCcCCCe---EEEEECCC--EEECC-EEEECCCCccCCC
Confidence 443444567899999999999987621 122 33333343 58885 6999999998876
No 87
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=49.40 E-value=16 Score=33.86 Aligned_cols=57 Identities=18% Similarity=0.150 Sum_probs=38.1
Q ss_pred hhccccCCCCeEEeeCceEEEEEeeCCCCeEEEEEEE-ECCEEEEEEeeeEEEecCCCCCCHHHHHhhCC
Q psy14643 431 YIEPVRNRPNLHISLNSQVTRVLIDSESKKAYGVEFV-KNGKKRIVFARKEIILSAGAINTPHILMHSGV 499 (801)
Q Consensus 431 ~L~~~~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~-~~g~~~~v~A~k~VILaAGai~SprLLl~SGI 499 (801)
++....++.+++++.+ +|++|..+++ + +.+. .+| ++.++ .||+|.|.- |.++...|+
T Consensus 61 ~l~~~~~~~gv~v~~~-~v~~i~~~~~-~----~~v~~~~g---~i~ad-~vI~A~G~~--~~~~~~~g~ 118 (180)
T 2ywl_A 61 RLEAHARRYGAEVRPG-VVKGVRDMGG-V----FEVETEEG---VEKAE-RLLLCTHKD--PTLPSLLGL 118 (180)
T ss_dssp HHHHHHHHTTCEEEEC-CCCEEEECSS-S----EEEECSSC---EEEEE-EEEECCTTC--CHHHHHHTC
T ss_pred HHHHHHHHcCCEEEeC-EEEEEEEcCC-E----EEEEECCC---EEEEC-EEEECCCCC--CCccccCCC
Confidence 3433444568999999 9999987653 2 2333 234 67885 799999975 566566665
No 88
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=48.63 E-value=6 Score=42.57 Aligned_cols=56 Identities=21% Similarity=0.270 Sum_probs=35.0
Q ss_pred ccCCCCeEEeeCceEE---------EEEeeCCCCeEEEEEEEECCEEEEEEeeeEEEecCCCCCCHHHHH-hhCC
Q psy14643 435 VRNRPNLHISLNSQVT---------RVLIDSESKKAYGVEFVKNGKKRIVFARKEIILSAGAINTPHILM-HSGV 499 (801)
Q Consensus 435 ~~~~~nl~v~~~a~V~---------rI~~d~~~~~a~gV~~~~~g~~~~v~A~k~VILaAGai~SprLLl-~SGI 499 (801)
.+.+.+++|+.++.|+ +|..++ +++ +|+. .+. +++|+ .||+|+|+ .|++|+- ..|+
T Consensus 181 ~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~--~~v-~v~~--~~g--~i~a~-~VV~A~G~-~s~~l~~~~~g~ 246 (405)
T 3c4n_A 181 QAIGQGAGLLLNTRAELVPGGVRLHRLTVTN--THQ-IVVH--ETR--QIRAG-VIIVAAGA-AGPALVEQGLGL 246 (405)
T ss_dssp HHHTTTCEEECSCEEEEETTEEEEECBCC----------CB--CCE--EEEEE-EEEECCGG-GHHHHHHHHHCC
T ss_pred HHHHCCCEEEcCCEEEeccccccccceEeeC--CeE-EEEE--CCc--EEECC-EEEECCCc-cHHHHHHHhcCC
Confidence 3445689999999999 776554 334 4432 222 68885 79999997 4667765 5553
No 89
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=48.21 E-value=14 Score=38.18 Aligned_cols=64 Identities=14% Similarity=0.138 Sum_probs=45.7
Q ss_pred hccccCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEE--CCEEEEEEeeeEEEecCCCCCCHHHHHhhCC
Q psy14643 432 IEPVRNRPNLHISLNSQVTRVLIDSESKKAYGVEFVK--NGKKRIVFARKEIILSAGAINTPHILMHSGV 499 (801)
Q Consensus 432 L~~~~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~--~g~~~~v~A~k~VILaAGai~SprLLl~SGI 499 (801)
|....++.++++++++.|.+|.-+ +++.+|.+.. +|+..++.++ .||+|.|.--+..+|..+|+
T Consensus 197 l~~~l~~~gv~v~~~~~v~~i~~~---~~~~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~l~~~~~ 262 (335)
T 2zbw_A 197 LMKAHEEGRLEVLTPYELRRVEGD---ERVRWAVVFHNQTQEELALEVD-AVLILAGYITKLGPLANWGL 262 (335)
T ss_dssp HHHHHHTTSSEEETTEEEEEEEES---SSEEEEEEEETTTCCEEEEECS-EEEECCCEEEECGGGGGSCC
T ss_pred HHhccccCCeEEecCCcceeEccC---CCeeEEEEEECCCCceEEEecC-EEEEeecCCCCchHhhhcce
Confidence 333345678999999999999763 3577788763 5766788886 79999997655555554443
No 90
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=48.10 E-value=15 Score=40.42 Aligned_cols=62 Identities=15% Similarity=0.209 Sum_probs=44.3
Q ss_pred hhccccCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEECCEEEEEEeeeEEEecCCCCCCHHHHHhhCC
Q psy14643 431 YIEPVRNRPNLHISLNSQVTRVLIDSESKKAYGVEFVKNGKKRIVFARKEIILSAGAINTPHILMHSGV 499 (801)
Q Consensus 431 ~L~~~~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~~g~~~~v~A~k~VILaAGai~SprLLl~SGI 499 (801)
.+....++.+++|++++.|++|.-++ ++++ |.+ .+|+ ++.++ .||+|+|..-++.||..+|+
T Consensus 207 ~l~~~l~~~GV~i~~~~~v~~i~~~~--~~v~-v~~-~~g~--~i~aD-~Vv~a~G~~p~~~l~~~~gl 268 (472)
T 3iwa_A 207 MLRHDLEKNDVVVHTGEKVVRLEGEN--GKVA-RVI-TDKR--TLDAD-LVILAAGVSPNTQLARDAGL 268 (472)
T ss_dssp HHHHHHHHTTCEEECSCCEEEEEESS--SBEE-EEE-ESSC--EEECS-EEEECSCEEECCHHHHHHTC
T ss_pred HHHHHHHhcCCEEEeCCEEEEEEccC--CeEE-EEE-eCCC--EEEcC-EEEECCCCCcCHHHHHhCCc
Confidence 33344556799999999999997644 4444 444 3554 57786 69999999866677777776
No 91
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=45.29 E-value=18 Score=37.01 Aligned_cols=59 Identities=10% Similarity=0.174 Sum_probs=44.4
Q ss_pred CCCCeEEeeCceEEEEEeeCCCCeEEEEEEEE--CCEEEEEEeeeEEEecCCCCCCHHHHHhhCC
Q psy14643 437 NRPNLHISLNSQVTRVLIDSESKKAYGVEFVK--NGKKRIVFARKEIILSAGAINTPHILMHSGV 499 (801)
Q Consensus 437 ~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~--~g~~~~v~A~k~VILaAGai~SprLLl~SGI 499 (801)
.+.++++++++.|.+|.-++ + ..+|.+.. .++..++.++ .||+|.|..-++.+|..+|+
T Consensus 200 ~~~gv~~~~~~~v~~i~~~~--~-~~~v~~~~~~~g~~~~~~~D-~vv~a~G~~p~~~~~~~~~~ 260 (332)
T 3lzw_A 200 HASKVNVLTPFVPAELIGED--K-IEQLVLEEVKGDRKEILEID-DLIVNYGFVSSLGPIKNWGL 260 (332)
T ss_dssp HHSSCEEETTEEEEEEECSS--S-CCEEEEEETTSCCEEEEECS-EEEECCCEECCCGGGGGSSC
T ss_pred hcCCeEEEeCceeeEEecCC--c-eEEEEEEecCCCceEEEECC-EEEEeeccCCCchHHhhcCc
Confidence 35689999999999997544 3 56777774 4556778886 79999998776776666654
No 92
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=43.54 E-value=30 Score=39.56 Aligned_cols=47 Identities=26% Similarity=0.368 Sum_probs=35.1
Q ss_pred CCCCeEEeeCceEEEEEeeCCCCeEEEEEEEECCEEEEEEeeeEEEecCCCCCC
Q psy14643 437 NRPNLHISLNSQVTRVLIDSESKKAYGVEFVKNGKKRIVFARKEIILSAGAINT 490 (801)
Q Consensus 437 ~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~~g~~~~v~A~k~VILaAGai~S 490 (801)
+.+|++|+. ..|+.|..++ +++.||... +|. ++.|+ .||+|+|+.-.
T Consensus 129 ~~~GV~I~~-~~V~~L~~d~--g~V~GV~t~-~G~--~i~Ad-~VVLATG~~s~ 175 (641)
T 3cp8_A 129 HEPNIDLLQ-DTVIGVSANS--GKFSSVTVR-SGR--AIQAK-AAILACGTFLN 175 (641)
T ss_dssp TCTTEEEEE-CCEEEEEEET--TEEEEEEET-TSC--EEEEE-EEEECCTTCBT
T ss_pred hCCCCEEEe-eEEEEEEecC--CEEEEEEEC-CCc--EEEeC-EEEECcCCCCC
Confidence 347999964 5899998876 578888754 453 57885 79999998633
No 93
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=42.59 E-value=36 Score=37.86 Aligned_cols=56 Identities=9% Similarity=0.038 Sum_probs=38.0
Q ss_pred hhccccCCCCeEEeeCceEEEEEeeCCCCeEEEEEE--EECCEEEEEEeeeEEEecCCCC
Q psy14643 431 YIEPVRNRPNLHISLNSQVTRVLIDSESKKAYGVEF--VKNGKKRIVFARKEIILSAGAI 488 (801)
Q Consensus 431 ~L~~~~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~--~~~g~~~~v~A~k~VILaAGai 488 (801)
+|...+...|++|+.+++|+.|..+++ +++.+|.+ ...+...++.|+ .||.|.|+-
T Consensus 125 ~L~~~a~~~gv~i~~~~~v~~i~~~~~-~~~~~v~v~~~~~~~~~~i~a~-~vV~AdG~~ 182 (535)
T 3ihg_A 125 ILLAQARKHGGAIRFGTRLLSFRQHDD-DAGAGVTARLAGPDGEYDLRAG-YLVGADGNR 182 (535)
T ss_dssp HHHHHHHHTTCEEESSCEEEEEEEECG-GGCSEEEEEEEETTEEEEEEEE-EEEECCCTT
T ss_pred HHHHHHHhCCCEEEeCCEEEEEEECCC-CccccEEEEEEcCCCeEEEEeC-EEEECCCCc
Confidence 443433345899999999999998764 23334443 343346788995 799999975
No 94
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=41.24 E-value=39 Score=37.35 Aligned_cols=58 Identities=16% Similarity=0.060 Sum_probs=39.4
Q ss_pred hHHhhccccCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEECCEEEEEEeeeEEEecCCCCC
Q psy14643 428 YHAYIEPVRNRPNLHISLNSQVTRVLIDSESKKAYGVEFVKNGKKRIVFARKEIILSAGAIN 489 (801)
Q Consensus 428 ~~~~L~~~~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~~g~~~~v~A~k~VILaAGai~ 489 (801)
...+|...+.+.+++|+.+++|+.|..+++ .++ |++.......+++|+ .||.|.|+--
T Consensus 108 l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~--~v~-v~~~~~~g~~~~~a~-~vVgADG~~S 165 (500)
T 2qa1_A 108 TETHLEQWATGLGADIRRGHEVLSLTDDGA--GVT-VEVRGPEGKHTLRAA-YLVGCDGGRS 165 (500)
T ss_dssp HHHHHHHHHHHTTCEEEETCEEEEEEEETT--EEE-EEEEETTEEEEEEES-EEEECCCTTC
T ss_pred HHHHHHHHHHHCCCEEECCcEEEEEEEcCC--eEE-EEEEcCCCCEEEEeC-EEEECCCcch
Confidence 334554444445899999999999998764 343 555543335678895 7888988753
No 95
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=40.82 E-value=5.2 Score=44.57 Aligned_cols=61 Identities=11% Similarity=0.058 Sum_probs=41.1
Q ss_pred hhccccCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEE--CCEEEEEEeeeEEEecCCCCCCHH
Q psy14643 431 YIEPVRNRPNLHISLNSQVTRVLIDSESKKAYGVEFVK--NGKKRIVFARKEIILSAGAINTPH 492 (801)
Q Consensus 431 ~L~~~~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~--~g~~~~v~A~k~VILaAGai~Spr 492 (801)
+|...+.+.+++|+.+++|++|..+++++...+|.+.. +|+..++.|+ .||+|.|+-..++
T Consensus 171 ~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad-~VV~A~G~~S~~r 233 (497)
T 2bry_A 171 LLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFD-VLISAAGGKFVPE 233 (497)
T ss_dssp HHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBS-EEEECCCTTCCCT
T ss_pred HHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcC-EEEECCCCCcccc
Confidence 44333445689999999999998753223345566642 4433567885 7999999876664
No 96
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=40.47 E-value=33 Score=36.31 Aligned_cols=47 Identities=15% Similarity=0.355 Sum_probs=33.1
Q ss_pred CCCCeEEeeCceEEEEEeeCCCCeEE-EEEEEECCEEEEEEeeeEEEecCCCCC
Q psy14643 437 NRPNLHISLNSQVTRVLIDSESKKAY-GVEFVKNGKKRIVFARKEIILSAGAIN 489 (801)
Q Consensus 437 ~~~nl~v~~~a~V~rI~~d~~~~~a~-gV~~~~~g~~~~v~A~k~VILaAGai~ 489 (801)
+.++++|+.+++|++|..+++ .++ .|++ .+|+ ++.++ .||+|.|+--
T Consensus 119 ~~~gv~i~~~~~v~~i~~~~~--~v~g~v~~-~~g~--~~~ad-~vV~AdG~~s 166 (399)
T 2x3n_A 119 GEATVEMLFETRIEAVQRDER--HAIDQVRL-NDGR--VLRPR-VVVGADGIAS 166 (399)
T ss_dssp TCTTEEEECSCCEEEEEECTT--SCEEEEEE-TTSC--EEEEE-EEEECCCTTC
T ss_pred hcCCcEEEcCCEEEEEEEcCC--ceEEEEEE-CCCC--EEECC-EEEECCCCCh
Confidence 334899999999999988763 343 3433 3454 67785 7999999643
No 97
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=40.43 E-value=14 Score=40.44 Aligned_cols=47 Identities=17% Similarity=0.080 Sum_probs=35.7
Q ss_pred CCCCeEEeeCceEEEEEeeCCCCeEEEEEEEECCEEEEEEeeeEEEecCCCC
Q psy14643 437 NRPNLHISLNSQVTRVLIDSESKKAYGVEFVKNGKKRIVFARKEIILSAGAI 488 (801)
Q Consensus 437 ~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~~g~~~~v~A~k~VILaAGai 488 (801)
...+.+|++++.|++|..+.+++++++|.. +|+ ++.|+ .||+|+|..
T Consensus 253 ~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~--~g~--~~~ad-~VV~a~~~~ 299 (453)
T 2bcg_G 253 AIYGGTYMLDTPIDEVLYKKDTGKFEGVKT--KLG--TFKAP-LVIADPTYF 299 (453)
T ss_dssp HHTTCEEECSCCCCEEEEETTTTEEEEEEE--TTE--EEECS-CEEECGGGC
T ss_pred HHcCCEEECCCEEEEEEEECCCCeEEEEEE--CCe--EEECC-EEEECCCcc
Confidence 345789999999999998731267888765 454 46785 699999976
No 98
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=40.41 E-value=14 Score=39.99 Aligned_cols=63 Identities=17% Similarity=0.231 Sum_probs=44.6
Q ss_pred cccCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEECCEEEEEEeeeEEEecCCCCCCHHHHHhhCCC
Q psy14643 434 PVRNRPNLHISLNSQVTRVLIDSESKKAYGVEFVKNGKKRIVFARKEIILSAGAINTPHILMHSGVG 500 (801)
Q Consensus 434 ~~~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~~g~~~~v~A~k~VILaAGai~SprLLl~SGIG 500 (801)
...++.++++++++.|++|.-+.+++++.+|++. +|+ ++.++ .||+|.|..-+..||..+|+-
T Consensus 199 ~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~-~G~--~i~~D-~Vv~a~G~~p~~~l~~~~gl~ 261 (431)
T 1q1r_A 199 HLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCE-DGT--RLPAD-LVIAGIGLIPNCELASAAGLQ 261 (431)
T ss_dssp HHHHHHTCEEECSCCEEEEEECTTTCCEEEEEET-TSC--EEECS-EEEECCCEEECCHHHHHTTCC
T ss_pred HHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeC-CCC--EEEcC-EEEECCCCCcCcchhhccCCC
Confidence 3344568999999999999852112456677654 453 56785 799999987666788777763
No 99
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=39.40 E-value=11 Score=40.73 Aligned_cols=63 Identities=13% Similarity=0.235 Sum_probs=45.9
Q ss_pred hhccccCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEECCEEEEEEeeeEEEecCCCCCCHHHHHhhCCC
Q psy14643 431 YIEPVRNRPNLHISLNSQVTRVLIDSESKKAYGVEFVKNGKKRIVFARKEIILSAGAINTPHILMHSGVG 500 (801)
Q Consensus 431 ~L~~~~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~~g~~~~v~A~k~VILaAGai~SprLLl~SGIG 500 (801)
++....++.++++++++.|++|.-++ ++.+|++. +|+ ++.++ .||+|.|..-+..+|..+|+-
T Consensus 190 ~l~~~l~~~GV~i~~~~~v~~i~~~~---~~~~v~~~-dg~--~i~aD-~Vv~a~G~~p~~~l~~~~gl~ 252 (410)
T 3ef6_A 190 WLRGLLTELGVQVELGTGVVGFSGEG---QLEQVMAS-DGR--SFVAD-SALICVGAEPADQLARQAGLA 252 (410)
T ss_dssp HHHHHHHHHTCEEECSCCEEEEECSS---SCCEEEET-TSC--EEECS-EEEECSCEEECCHHHHHTTCC
T ss_pred HHHHHHHHCCCEEEeCCEEEEEeccC---cEEEEEEC-CCC--EEEcC-EEEEeeCCeecHHHHHhCCCc
Confidence 33334456799999999999997543 45566654 454 57786 799999998888888888763
No 100
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=39.08 E-value=7.6 Score=40.38 Aligned_cols=57 Identities=18% Similarity=0.221 Sum_probs=38.7
Q ss_pred hhccccCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEECCEEEEEEeeeEEEecCCCCCCHHHH
Q psy14643 431 YIEPVRNRPNLHISLNSQVTRVLIDSESKKAYGVEFVKNGKKRIVFARKEIILSAGAINTPHIL 494 (801)
Q Consensus 431 ~L~~~~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~~g~~~~v~A~k~VILaAGai~SprLL 494 (801)
|+....++.+++++.+++|++|..++ +...+ +..++. ++.++ .||+|.|+...|+++
T Consensus 81 ~l~~~~~~~~~~~~~~~~v~~i~~~~--~~~~~--v~~~~g--~~~~d-~vV~AtG~~~~~~~~ 137 (357)
T 4a9w_A 81 YLAQYEQKYALPVLRPIRVQRVSHFG--ERLRV--VARDGR--QWLAR-AVISATGTWGEAYTP 137 (357)
T ss_dssp HHHHHHHHTTCCEECSCCEEEEEEET--TEEEE--EETTSC--EEEEE-EEEECCCSGGGBCCC
T ss_pred HHHHHHHHcCCEEEcCCEEEEEEECC--CcEEE--EEeCCC--EEEeC-EEEECCCCCCCCCCC
Confidence 55444556688999999999998876 33322 332222 67885 699999986665544
No 101
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=38.37 E-value=28 Score=36.84 Aligned_cols=50 Identities=12% Similarity=-0.014 Sum_probs=36.6
Q ss_pred CCCeEEeeCceEEEEEeeCCCCeEEEEEEEECCEEEEEEeeeEEEecCCCCCC
Q psy14643 438 RPNLHISLNSQVTRVLIDSESKKAYGVEFVKNGKKRIVFARKEIILSAGAINT 490 (801)
Q Consensus 438 ~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~~g~~~~v~A~k~VILaAGai~S 490 (801)
+.+++|+.+++|++|..+++ + ...|++..+|+..++.|+ .||.|.|+--.
T Consensus 115 ~~g~~i~~~~~v~~i~~~~~-~-~~~v~~~~~g~~~~~~a~-~vV~AdG~~S~ 164 (394)
T 1k0i_A 115 ACGATTVYQAAEVRLHDLQG-E-RPYVTFERDGERLRLDCD-YIAGCDGFHGI 164 (394)
T ss_dssp HTTCEEESSCEEEEEECTTS-S-SCEEEEEETTEEEEEECS-EEEECCCTTCS
T ss_pred hcCCeEEeceeEEEEEEecC-C-ceEEEEecCCcEEEEEeC-EEEECCCCCcH
Confidence 45899999999999987542 2 234666457877788995 79999996544
No 102
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=38.08 E-value=26 Score=38.32 Aligned_cols=62 Identities=11% Similarity=0.186 Sum_probs=42.7
Q ss_pred cccCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEEC--CEEEEEEeeeEEEecCCCCCCHHH--HHhhCC
Q psy14643 434 PVRNRPNLHISLNSQVTRVLIDSESKKAYGVEFVKN--GKKRIVFARKEIILSAGAINTPHI--LMHSGV 499 (801)
Q Consensus 434 ~~~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~~--g~~~~v~A~k~VILaAGai~SprL--Ll~SGI 499 (801)
...++.++++++++.|++|.-++ +. ..|++..+ |+..++.++ .||+|.|..-+..+ |..+|+
T Consensus 218 ~~l~~~gV~i~~~~~v~~i~~~~--~~-~~v~~~~~~~g~~~~i~~D-~vv~a~G~~p~~~~l~l~~~g~ 283 (464)
T 2eq6_A 218 RALEKEGIRVRTKTKAVGYEKKK--DG-LHVRLEPAEGGEGEEVVVD-KVLVAVGRKPRTEGLGLEKAGV 283 (464)
T ss_dssp HHHHHTTCEEECSEEEEEEEEET--TE-EEEEEEETTCCSCEEEEES-EEEECSCEEESCTTSSHHHHTC
T ss_pred HHHHhcCCEEEcCCEEEEEEEeC--CE-EEEEEeecCCCceeEEEcC-EEEECCCcccCCCCCChhhcCc
Confidence 33456789999999999998654 22 23555435 665678886 69999998755554 344554
No 103
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=37.90 E-value=23 Score=39.16 Aligned_cols=59 Identities=19% Similarity=0.233 Sum_probs=43.2
Q ss_pred cccCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEECCEEEEEEeeeEEEecCCCCCCHHHHHhhCC
Q psy14643 434 PVRNRPNLHISLNSQVTRVLIDSESKKAYGVEFVKNGKKRIVFARKEIILSAGAINTPHILMHSGV 499 (801)
Q Consensus 434 ~~~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~~g~~~~v~A~k~VILaAGai~SprLLl~SGI 499 (801)
...++.+++|++++.|++|.-++ +++ .|++. +|+ ++.++ .||+|+|..-+..||..+|+
T Consensus 234 ~~l~~~GV~v~~~~~V~~i~~~~--~~~-~v~l~-dG~--~i~aD-~Vv~a~G~~pn~~l~~~~gl 292 (493)
T 1m6i_A 234 EKVRREGVKVMPNAIVQSVGVSS--GKL-LIKLK-DGR--KVETD-HIVAAVGLEPNVELAKTGGL 292 (493)
T ss_dssp HHHHTTTCEEECSCCEEEEEEET--TEE-EEEET-TSC--EEEES-EEEECCCEEECCTTHHHHTC
T ss_pred HHHHhcCCEEEeCCEEEEEEecC--CeE-EEEEC-CCC--EEECC-EEEECCCCCccHHHHHHcCC
Confidence 34456799999999999997654 333 44432 453 57786 79999999877778877876
No 104
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=37.84 E-value=17 Score=39.96 Aligned_cols=67 Identities=18% Similarity=0.282 Sum_probs=45.0
Q ss_pred HhhccccCCCCeE--EeeCceEEEEEeeCCCCeEEEEEEEE--CCEEEEEEeeeEEEecCCCCCCHHHHHhhC
Q psy14643 430 AYIEPVRNRPNLH--ISLNSQVTRVLIDSESKKAYGVEFVK--NGKKRIVFARKEIILSAGAINTPHILMHSG 498 (801)
Q Consensus 430 ~~L~~~~~~~nl~--v~~~a~V~rI~~d~~~~~a~gV~~~~--~g~~~~v~A~k~VILaAGai~SprLLl~SG 498 (801)
.||....++.+++ |+.+++|++|..+++++ ...|.+.. +|+..++.++ .||+|.|....|+++-.-|
T Consensus 105 ~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~-~~~V~~~~~~~g~~~~~~~d-~VVvAtG~~s~p~~p~ipG 175 (464)
T 2xve_A 105 DYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQ-TFTVTVQDHTTDTIYSEEFD-YVVCCTGHFSTPYVPEFEG 175 (464)
T ss_dssp HHHHHHHHHHTCGGGEECSEEEEEEEEETTTT-EEEEEEEETTTTEEEEEEES-EEEECCCSSSSBCCCCCBT
T ss_pred HHHHHHHHHcCCcceEEeCCEEEEEEEcCCCC-cEEEEEEEcCCCceEEEEcC-EEEECCCCCCCCccCCCCC
Confidence 3554444444666 88999999999876432 23455553 3666778886 6999999888887653333
No 105
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=36.44 E-value=30 Score=37.81 Aligned_cols=65 Identities=15% Similarity=0.158 Sum_probs=42.7
Q ss_pred hhcccc-CCCCeEEeeCceEEEEEeeCCCCeEEEEEEEE-CCEEEEEEeeeEEEecCCCCCCHHH--HHhhCC
Q psy14643 431 YIEPVR-NRPNLHISLNSQVTRVLIDSESKKAYGVEFVK-NGKKRIVFARKEIILSAGAINTPHI--LMHSGV 499 (801)
Q Consensus 431 ~L~~~~-~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~-~g~~~~v~A~k~VILaAGai~SprL--Ll~SGI 499 (801)
++.... ++.+++|++++.|++|.-+++ . ..|.+.. +|+..++.++ .||+|+|..-+..+ |..+|+
T Consensus 220 ~l~~~l~~~~gv~i~~~~~v~~i~~~~~--~-~~v~~~~~~g~~~~i~~D-~vv~a~G~~p~~~~l~l~~~gl 288 (468)
T 2qae_A 220 ALVGALAKNEKMKFMTSTKVVGGTNNGD--S-VSLEVEGKNGKRETVTCE-ALLVSVGRRPFTGGLGLDKINV 288 (468)
T ss_dssp HHHHHHHHHTCCEEECSCEEEEEEECSS--S-EEEEEECC---EEEEEES-EEEECSCEEECCTTSCHHHHTC
T ss_pred HHHHHHhhcCCcEEEeCCEEEEEEEcCC--e-EEEEEEcCCCceEEEECC-EEEECCCcccCCCCCCchhcCC
Confidence 333444 567999999999999986542 2 2344432 4555678886 69999998766666 455565
No 106
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=36.17 E-value=42 Score=37.05 Aligned_cols=57 Identities=14% Similarity=0.142 Sum_probs=38.2
Q ss_pred hHHhhccccCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEE-CCEEEEEEeeeEEEecCCCCC
Q psy14643 428 YHAYIEPVRNRPNLHISLNSQVTRVLIDSESKKAYGVEFVK-NGKKRIVFARKEIILSAGAIN 489 (801)
Q Consensus 428 ~~~~L~~~~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~-~g~~~~v~A~k~VILaAGai~ 489 (801)
...+|...+.+.+++|+.+++|+.|..+++ .++ |.+.. +| ..++.|+ .||.|.|+--
T Consensus 109 l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~--~v~-v~~~~~~g-~~~~~a~-~vVgADG~~S 166 (499)
T 2qa2_A 109 TESVLEEWALGRGAELLRGHTVRALTDEGD--HVV-VEVEGPDG-PRSLTTR-YVVGCDGGRS 166 (499)
T ss_dssp HHHHHHHHHHHTTCEEEESCEEEEEEECSS--CEE-EEEECSSC-EEEEEEE-EEEECCCTTC
T ss_pred HHHHHHHHHHhCCCEEEcCCEEEEEEEeCC--EEE-EEEEcCCC-cEEEEeC-EEEEccCccc
Confidence 333454444445899999999999988764 233 55543 24 5678895 7888888743
No 107
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=35.87 E-value=21 Score=38.65 Aligned_cols=45 Identities=18% Similarity=0.327 Sum_probs=35.1
Q ss_pred CCCCeEEeeCceEEEEEeeCCCCeEEEEEEEECCEEEEEEeeeEEEecCCCC
Q psy14643 437 NRPNLHISLNSQVTRVLIDSESKKAYGVEFVKNGKKRIVFARKEIILSAGAI 488 (801)
Q Consensus 437 ~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~~g~~~~v~A~k~VILaAGai 488 (801)
...+.+|++++.|++|..++ +++++|. .+|+ ++.|+ .||+|+|..
T Consensus 245 ~~~G~~i~~~~~V~~I~~~~--~~v~~v~--~~g~--~~~ad-~VV~a~~~~ 289 (433)
T 1d5t_A 245 AIYGGTYMLNKPVDDIIMEN--GKVVGVK--SEGE--VARCK-QLICDPSYV 289 (433)
T ss_dssp HHHTCCCBCSCCCCEEEEET--TEEEEEE--ETTE--EEECS-EEEECGGGC
T ss_pred HHcCCEEECCCEEEEEEEeC--CEEEEEE--ECCe--EEECC-EEEECCCCC
Confidence 34578999999999999876 6788776 3564 57785 699999976
No 108
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=35.27 E-value=37 Score=38.92 Aligned_cols=56 Identities=25% Similarity=0.308 Sum_probs=38.9
Q ss_pred cCCC-CeEEeeCceEEEEEeeCC-CCeEEEEEEEE-----CCEEEEEEeeeEEEecCCCCCCHH
Q psy14643 436 RNRP-NLHISLNSQVTRVLIDSE-SKKAYGVEFVK-----NGKKRIVFARKEIILSAGAINTPH 492 (801)
Q Consensus 436 ~~~~-nl~v~~~a~V~rI~~d~~-~~~a~gV~~~~-----~g~~~~v~A~k~VILaAGai~Spr 492 (801)
.+.+ +++|+.+++|+.|..+++ ++..+.|.+.. +|...+++|+ .||.|.|+--..|
T Consensus 152 ~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~G~~~~i~a~-~vVgADG~~S~vR 214 (639)
T 2dkh_A 152 RNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHAGQIETVQAR-YVVGCDGARSNVR 214 (639)
T ss_dssp HHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGTTCEEEEEEE-EEEECCCTTCHHH
T ss_pred HhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccCCCCeEEEEeC-EEEECCCcchHHH
Confidence 3344 669999999999998763 12234466654 5767789994 7999999754443
No 109
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=34.86 E-value=42 Score=35.46 Aligned_cols=62 Identities=8% Similarity=0.201 Sum_probs=43.3
Q ss_pred hhccccCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEECCEEEEEEeeeEEEecCCCCCCHHHHHhhCC
Q psy14643 431 YIEPVRNRPNLHISLNSQVTRVLIDSESKKAYGVEFVKNGKKRIVFARKEIILSAGAINTPHILMHSGV 499 (801)
Q Consensus 431 ~L~~~~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~~g~~~~v~A~k~VILaAGai~SprLLl~SGI 499 (801)
++....++.++++++++.|++|..+++ ...|++ .+|+ ++.++ .||+|+|..-+..||..+|+
T Consensus 192 ~l~~~l~~~gv~i~~~~~v~~i~~~~~---~~~v~~-~~g~--~i~~d-~vv~a~G~~p~~~l~~~~g~ 253 (384)
T 2v3a_A 192 AVQAGLEGLGVRFHLGPVLASLKKAGE---GLEAHL-SDGE--VIPCD-LVVSAVGLRPRTELAFAAGL 253 (384)
T ss_dssp HHHHHHHTTTCEEEESCCEEEEEEETT---EEEEEE-TTSC--EEEES-EEEECSCEEECCHHHHHTTC
T ss_pred HHHHHHHHcCCEEEeCCEEEEEEecCC---EEEEEE-CCCC--EEECC-EEEECcCCCcCHHHHHHCCC
Confidence 333444567999999999999986642 223333 2453 57786 69999998776677777776
No 110
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=34.66 E-value=36 Score=36.75 Aligned_cols=55 Identities=15% Similarity=0.147 Sum_probs=39.3
Q ss_pred cccCCCCeeeccCCcEEe-eccCCCCCC-----CCCC-h-HHHHHHHHHHHHHHHhhhccCCC
Q psy14643 742 TVVDNELRVHGIKNLRVA-DASVMPILI-----AAHP-M-APIYMIGEKCADMIKDTWSQGEN 796 (801)
Q Consensus 742 ~VVD~~~rV~G~~NL~V~-DaSvfP~~~-----~~NP-t-lTi~AlA~R~Ad~I~~~~~~~~~ 796 (801)
=+||+.+|+-+++|+|++ |++.+|... ...| + ..+...|.-+|+.|+..+..+..
T Consensus 275 i~vd~~lq~t~~~~IfAiGD~a~~p~~~~~~~~~~~pk~a~~A~~qg~~~A~Ni~~~l~g~~~ 337 (430)
T 3hyw_A 275 VIVNRCFQNPTYKNIFGVGVVTAIPPIEKTPIPTGVPKTGMMIEQMAMAVAHNIVNDIRNNPD 337 (430)
T ss_dssp BCCCTTSBCSSSTTEEECSTTBCCCCSSCCSSCCCCCCCHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred EEecccccCCCCCCEEEeccEEecCCcccCcCcCccchHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 478999999999999987 566677432 2233 2 24566788889999888876543
No 111
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=33.78 E-value=28 Score=39.85 Aligned_cols=49 Identities=18% Similarity=0.207 Sum_probs=35.3
Q ss_pred ccCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEECCEEEEEEeeeEEEecCCC
Q psy14643 435 VRNRPNLHISLNSQVTRVLIDSESKKAYGVEFVKNGKKRIVFARKEIILSAGA 487 (801)
Q Consensus 435 ~~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~~g~~~~v~A~k~VILaAGa 487 (801)
+....+.+|++++.|.+|+++++.++++||. ..+|+ ++.|+ .||..+..
T Consensus 387 ~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~-~~~Ge--~i~A~-~VVs~~~~ 435 (650)
T 1vg0_A 387 MCAVFGGIYCLRHSVQCLVVDKESRKCKAVI-DQFGQ--RIISK-HFIIEDSY 435 (650)
T ss_dssp HHHHTTCEEESSCCEEEEEEETTTCCEEEEE-ETTSC--EEECS-EEEEEGGG
T ss_pred HHHHcCCEEEeCCEeeEEEEeCCCCeEEEEE-eCCCC--EEEcC-EEEEChhh
Confidence 4456688999999999999987546799987 33465 46785 56665443
No 112
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=32.56 E-value=36 Score=37.02 Aligned_cols=55 Identities=11% Similarity=0.151 Sum_probs=39.1
Q ss_pred ccCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEECCEEEEEEeeeEEEecCCCCCCHHH
Q psy14643 435 VRNRPNLHISLNSQVTRVLIDSESKKAYGVEFVKNGKKRIVFARKEIILSAGAINTPHI 493 (801)
Q Consensus 435 ~~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~~g~~~~v~A~k~VILaAGai~SprL 493 (801)
..++.+++|++++.|++|.-++ +. ..|++..+|...++.++ .||+|.|..-+..+
T Consensus 220 ~l~~~gv~i~~~~~v~~i~~~~--~~-~~v~~~~~g~~~~~~~D-~vv~a~G~~p~~~~ 274 (455)
T 1ebd_A 220 RLKKKGVEVVTNALAKGAEERE--DG-VTVTYEANGETKTIDAD-YVLVTVGRRPNTDE 274 (455)
T ss_dssp HHHHTTCEEEESEEEEEEEEET--TE-EEEEEEETTEEEEEEES-EEEECSCEEESCSS
T ss_pred HHHHCCCEEEeCCEEEEEEEeC--Ce-EEEEEEeCCceeEEEcC-EEEECcCCCcccCc
Confidence 3446789999999999998654 22 23444445556678886 79999998755555
No 113
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=32.48 E-value=42 Score=36.43 Aligned_cols=50 Identities=14% Similarity=0.199 Sum_probs=38.3
Q ss_pred CCCCeEEeeCceEEEEEeeCCCCeEEEEEEEE--CCEEEEEEeeeEEEecCCCCCC
Q psy14643 437 NRPNLHISLNSQVTRVLIDSESKKAYGVEFVK--NGKKRIVFARKEIILSAGAINT 490 (801)
Q Consensus 437 ~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~--~g~~~~v~A~k~VILaAGai~S 490 (801)
...+++|++++.|++|..+++ ...|.+.. +|+..++.++ .||+|.|..-.
T Consensus 327 ~~~~v~i~~~~~v~~v~~~~~---~~~v~~~~~~~g~~~~~~~D-~Vv~AtG~~p~ 378 (463)
T 3s5w_A 327 GIPRHAFRCMTTVERATATAQ---GIELALRDAGSGELSVETYD-AVILATGYERQ 378 (463)
T ss_dssp CCCCSEEETTEEEEEEEEETT---EEEEEEEETTTCCEEEEEES-EEEECCCEECC
T ss_pred CCCCeEEEeCCEEEEEEecCC---EEEEEEEEcCCCCeEEEECC-EEEEeeCCCCC
Confidence 457899999999999987652 23455552 5777889997 79999998766
No 114
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=32.43 E-value=27 Score=38.05 Aligned_cols=62 Identities=16% Similarity=0.170 Sum_probs=42.3
Q ss_pred cccCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEECCEEEEEEeeeEEEecCCCCCCHHH--HHhhCC
Q psy14643 434 PVRNRPNLHISLNSQVTRVLIDSESKKAYGVEFVKNGKKRIVFARKEIILSAGAINTPHI--LMHSGV 499 (801)
Q Consensus 434 ~~~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~~g~~~~v~A~k~VILaAGai~SprL--Ll~SGI 499 (801)
...++.++++++++.|++|.-++ +. ..|.+..+|+..++.++ .||+|.|..-+..+ |..+|+
T Consensus 220 ~~l~~~gv~i~~~~~v~~i~~~~--~~-~~v~~~~~g~~~~~~~D-~vv~a~G~~p~~~~l~~~~~gl 283 (464)
T 2a8x_A 220 KQFKKLGVTILTATKVESIADGG--SQ-VTVTVTKDGVAQELKAE-KVLQAIGFAPNVEGYGLDKAGV 283 (464)
T ss_dssp HHHHHHTCEEECSCEEEEEEECS--SC-EEEEEESSSCEEEEEES-EEEECSCEEECCSSSCHHHHTC
T ss_pred HHHHHcCCEEEeCcEEEEEEEcC--Ce-EEEEEEcCCceEEEEcC-EEEECCCCCccCCCCCchhcCC
Confidence 33446689999999999997654 22 23444335655678886 79999998766665 455555
No 115
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=32.01 E-value=46 Score=36.79 Aligned_cols=59 Identities=12% Similarity=0.243 Sum_probs=41.1
Q ss_pred hHHhhccccCCCCeEEeeCceEEEEEeeCCCC-----eEEEEEEEE--CCEEEEEEeeeEEEecCCC
Q psy14643 428 YHAYIEPVRNRPNLHISLNSQVTRVLIDSESK-----KAYGVEFVK--NGKKRIVFARKEIILSAGA 487 (801)
Q Consensus 428 ~~~~L~~~~~~~nl~v~~~a~V~rI~~d~~~~-----~a~gV~~~~--~g~~~~v~A~k~VILaAGa 487 (801)
...||...+++=+..|..+++|++|..++.++ ...-|+... .|+..++.|+ .||+|.|.
T Consensus 147 ~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar-~vVlatG~ 212 (501)
T 4b63_A 147 FEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTR-KVVIAIGG 212 (501)
T ss_dssp HHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEE-EEEECCCC
T ss_pred HHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeC-EEEECcCC
Confidence 34477666555556799999999999865422 134455553 4677888895 79999994
No 116
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=31.77 E-value=23 Score=39.71 Aligned_cols=61 Identities=21% Similarity=0.380 Sum_probs=41.5
Q ss_pred HhhccccCCCCe--EEeeCceEEEEEeeCCCCeEEEEEEEECCEEEEEEeeeEEEecCCCCCCHHHHH
Q psy14643 430 AYIEPVRNRPNL--HISLNSQVTRVLIDSESKKAYGVEFVKNGKKRIVFARKEIILSAGAINTPHILM 495 (801)
Q Consensus 430 ~~L~~~~~~~nl--~v~~~a~V~rI~~d~~~~~a~gV~~~~~g~~~~v~A~k~VILaAGai~SprLLl 495 (801)
.|+....++.++ +|+.+++|+++.++++++ ...|.. .+|+ ++.++ .||+|.|+...|++.-
T Consensus 91 ~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~-~~~V~~-~~G~--~i~ad-~lV~AtG~~s~p~~p~ 153 (540)
T 3gwf_A 91 EYLEDVVDRFDLRRHFKFGTEVTSALYLDDEN-LWEVTT-DHGE--VYRAK-YVVNAVGLLSAINFPN 153 (540)
T ss_dssp HHHHHHHHHTTCGGGEEESCCEEEEEEETTTT-EEEEEE-TTSC--EEEEE-EEEECCCSCCSBCCCC
T ss_pred HHHHHHHHHcCCcceeEeccEEEEEEEeCCCC-EEEEEE-cCCC--EEEeC-EEEECCcccccCCCCC
Confidence 355544445566 789999999999987533 223333 2454 56785 6999999988777643
No 117
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=31.61 E-value=31 Score=38.17 Aligned_cols=51 Identities=14% Similarity=0.085 Sum_probs=36.6
Q ss_pred hhccccCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEECCEEEEEEeeeEEEecCCC
Q psy14643 431 YIEPVRNRPNLHISLNSQVTRVLIDSESKKAYGVEFVKNGKKRIVFARKEIILSAGA 487 (801)
Q Consensus 431 ~L~~~~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~~g~~~~v~A~k~VILaAGa 487 (801)
+|...+.+.+++++.+ +|++|..+++ +++.+|+.. +|+ ++.|+ .||.|.|+
T Consensus 178 ~L~~~a~~~gv~~~~~-~v~~i~~~~~-~~~~~v~~~-~g~--~~~ad-~vV~A~G~ 228 (511)
T 2weu_A 178 YLSEYAIARGVRHVVD-DVQHVGQDER-GWISGVHTK-QHG--EISGD-LFVDCTGF 228 (511)
T ss_dssp HHHHHHHHTTCEEEEC-CEEEEEECTT-SCEEEEEES-SSC--EEECS-EEEECCGG
T ss_pred HHHHHHHHCCCEEEEC-eEeEEEEcCC-CCEEEEEEC-CCC--EEEcC-EEEECCCc
Confidence 4434344578999999 9999988654 456677654 453 57885 79999996
No 118
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=30.70 E-value=33 Score=37.48 Aligned_cols=63 Identities=17% Similarity=0.281 Sum_probs=42.0
Q ss_pred cccCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEE--CCEEEEEEeeeEEEecCCCCCCHHH--HHhhCC
Q psy14643 434 PVRNRPNLHISLNSQVTRVLIDSESKKAYGVEFVK--NGKKRIVFARKEIILSAGAINTPHI--LMHSGV 499 (801)
Q Consensus 434 ~~~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~--~g~~~~v~A~k~VILaAGai~SprL--Ll~SGI 499 (801)
...++.+++|++++.|++|..+++ + ...|++.. .+...++.++ .||+|.|..-+..+ |..+|+
T Consensus 228 ~~l~~~Gv~i~~~~~v~~i~~~~~-~-~~~v~~~~~~~~~~~~i~~D-~vv~a~G~~p~~~~l~l~~~g~ 294 (474)
T 1zmd_A 228 RILQKQGFKFKLNTKVTGATKKSD-G-KIDVSIEAASGGKAEVITCD-VLLVCIGRRPFTKNLGLEELGI 294 (474)
T ss_dssp HHHHHTTCEEECSEEEEEEEECTT-S-CEEEEEEETTSCCCEEEEES-EEEECSCEEECCTTSSHHHHTC
T ss_pred HHHHHCCCEEEeCceEEEEEEcCC-c-eEEEEEEecCCCCceEEEcC-EEEECcCCCcCCCcCCchhcCC
Confidence 344567899999999999986553 2 12344432 2334567886 69999998766655 455565
No 119
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=30.53 E-value=38 Score=37.05 Aligned_cols=67 Identities=12% Similarity=0.134 Sum_probs=43.1
Q ss_pred hhccccCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEE--CCEEEEEEeeeEEEecCCCCCCHH--HHHhhCC
Q psy14643 431 YIEPVRNRPNLHISLNSQVTRVLIDSESKKAYGVEFVK--NGKKRIVFARKEIILSAGAINTPH--ILMHSGV 499 (801)
Q Consensus 431 ~L~~~~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~--~g~~~~v~A~k~VILaAGai~Spr--LLl~SGI 499 (801)
++....++.+++|++++.|++|..+++ +....|++.. ++...++.++ .||+|.|..-+.. +|..+|+
T Consensus 229 ~l~~~l~~~gv~i~~~~~v~~i~~~~~-~~~~~v~~~~~~~g~~~~~~~D-~vv~a~G~~p~~~~l~l~~~g~ 299 (478)
T 1v59_A 229 ATQKFLKKQGLDFKLSTKVISAKRNDD-KNVVEIVVEDTKTNKQENLEAE-VLLVAVGRRPYIAGLGAEKIGL 299 (478)
T ss_dssp HHHHHHHHTTCEEECSEEEEEEEEETT-TTEEEEEEEETTTTEEEEEEES-EEEECSCEEECCTTSCTTTTTC
T ss_pred HHHHHHHHCCCEEEeCCEEEEEEEecC-CCeEEEEEEEcCCCCceEEECC-EEEECCCCCcCCCCCCchhcCc
Confidence 333344567999999999999986312 2244555542 3555678886 6999999765554 3334443
No 120
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=30.44 E-value=49 Score=33.36 Aligned_cols=51 Identities=12% Similarity=0.057 Sum_probs=36.4
Q ss_pred cccCCCCeeeccCCcEEeeccC-CCCCCCCCChHHHHHHHHHHHHHHHhhhccCC
Q psy14643 742 TVVDNELRVHGIKNLRVADASV-MPILIAAHPMAPIYMIGEKCADMIKDTWSQGE 795 (801)
Q Consensus 742 ~VVD~~~rV~G~~NL~V~DaSv-fP~~~~~NPtlTi~AlA~R~Ad~I~~~~~~~~ 795 (801)
=+||.+++. .++|||+++-.. .| +........+.-|..+|..|.+.+.+++
T Consensus 269 i~vd~~~~t-~~~~vya~GD~~~~~--~~~~~~~~A~~~g~~aa~~i~~~l~~~~ 320 (323)
T 3f8d_A 269 IKVDEWMRT-SVPGVFAAGDCTSAW--LGFRQVITAVAQGAVAATSAYRYVTEKK 320 (323)
T ss_dssp BCCCTTCBC-SSTTEEECSTTBSTT--TTCCCHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred EecCCCcee-cCCCEEEcceecCCC--CcccceeehhhHHHHHHHHHHHHHHHhh
Confidence 568888887 799999986544 43 2334556677778889999988876554
No 121
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=29.68 E-value=94 Score=37.79 Aligned_cols=60 Identities=15% Similarity=0.231 Sum_probs=44.0
Q ss_pred CCCCeEEeeCceEEEEEeeCCCCeEEEEEEEE------------CCEEEEEEeeeEEEecCCCC-CCHHHHHh-hCC
Q psy14643 437 NRPNLHISLNSQVTRVLIDSESKKAYGVEFVK------------NGKKRIVFARKEIILSAGAI-NTPHILMH-SGV 499 (801)
Q Consensus 437 ~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~------------~g~~~~v~A~k~VILaAGai-~SprLLl~-SGI 499 (801)
+..++++++++.+.+|..++ +++++|++.. .|+..++.++ .||+|.|.. .++.|+.. +|+
T Consensus 381 ~~~Gv~~~~~~~~~~i~~~~--g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD-~Vi~A~G~~~~~~~l~~~~~gl 454 (1025)
T 1gte_A 381 KEEKCEFLPFLSPRKVIVKG--GRIVAVQFVRTEQDETGKWNEDEDQIVHLKAD-VVISAFGSVLRDPKVKEALSPI 454 (1025)
T ss_dssp HHTTCEEECSEEEEEEEEET--TEEEEEEEEEEEECTTSCEEEEEEEEEEEECS-EEEECSCEECCCHHHHHHTTTS
T ss_pred HHcCCEEEeCCCceEEEccC--CeEEEEEEEEeEEcCCCCcccCCCceEEEECC-EEEECCCCCCCchhhhhcccCc
Confidence 34689999999999998653 6788887752 2344678886 799999985 46666665 465
No 122
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=29.25 E-value=89 Score=33.99 Aligned_cols=42 Identities=24% Similarity=0.235 Sum_probs=30.6
Q ss_pred eEEeeCceEEEEEeeCCCCeEEEEEEEECCEEEEEEeeeEEEecCC
Q psy14643 441 LHISLNSQVTRVLIDSESKKAYGVEFVKNGKKRIVFARKEIILSAG 486 (801)
Q Consensus 441 l~v~~~a~V~rI~~d~~~~~a~gV~~~~~g~~~~v~A~k~VILaAG 486 (801)
.+|++++.|++|..++ ++++ |.+...+...++.|+ .||+|+.
T Consensus 252 ~~i~~~~~V~~i~~~~--~~v~-v~~~~g~~~~~~~ad-~vI~a~p 293 (489)
T 2jae_A 252 DNIVFGAEVTSMKNVS--EGVT-VEYTAGGSKKSITAD-YAICTIP 293 (489)
T ss_dssp GGEETTCEEEEEEEET--TEEE-EEEEETTEEEEEEES-EEEECSC
T ss_pred CeEEECCEEEEEEEcC--CeEE-EEEecCCeEEEEECC-EEEECCC
Confidence 5699999999999876 3333 544444455678896 6999986
No 123
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=28.43 E-value=19 Score=39.57 Aligned_cols=62 Identities=15% Similarity=0.185 Sum_probs=40.8
Q ss_pred cccCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEECCEEEEEEeeeEEEecCCCCCCHHH-HHhhCC
Q psy14643 434 PVRNRPNLHISLNSQVTRVLIDSESKKAYGVEFVKNGKKRIVFARKEIILSAGAINTPHI-LMHSGV 499 (801)
Q Consensus 434 ~~~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~~g~~~~v~A~k~VILaAGai~SprL-Ll~SGI 499 (801)
...++.+++|++++.|++|.-+++ +++..|++. +|+ .++.++ .||+|+|..-+..| |..+|+
T Consensus 234 ~~l~~~Gv~i~~~~~v~~i~~~~~-~~~~~v~~~-~G~-~~i~~D-~vv~a~G~~p~~~l~l~~~gl 296 (479)
T 2hqm_A 234 DHYVKEGINVHKLSKIVKVEKNVE-TDKLKIHMN-DSK-SIDDVD-ELIWTIGRKSHLGMGSENVGI 296 (479)
T ss_dssp HHHHHHTCEEECSCCEEEEEECC--CCCEEEEET-TSC-EEEEES-EEEECSCEEECCCSSGGGGTC
T ss_pred HHHHhCCeEEEeCCEEEEEEEcCC-CcEEEEEEC-CCc-EEEEcC-EEEECCCCCCccccChhhcCc
Confidence 334466899999999999976543 223344443 553 467886 69999997655555 455554
No 124
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=28.36 E-value=24 Score=38.59 Aligned_cols=60 Identities=18% Similarity=0.299 Sum_probs=39.9
Q ss_pred cccCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEECCEEEEEEeeeEEEecCCCCCCHHH--HHhhCC
Q psy14643 434 PVRNRPNLHISLNSQVTRVLIDSESKKAYGVEFVKNGKKRIVFARKEIILSAGAINTPHI--LMHSGV 499 (801)
Q Consensus 434 ~~~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~~g~~~~v~A~k~VILaAGai~SprL--Ll~SGI 499 (801)
..+++.+++|++++.|++|..+++ + +..|++..+|+ +.++ .||+|+|..-+..+ |..+|+
T Consensus 219 ~~l~~~Gv~i~~~~~v~~i~~~~~-~-~~~v~~~~~g~---i~aD-~Vv~a~G~~p~~~~l~l~~~g~ 280 (463)
T 4dna_A 219 AAMEEKGIRILCEDIIQSVSADAD-G-RRVATTMKHGE---IVAD-QVMLALGRMPNTNGLGLEAAGV 280 (463)
T ss_dssp HHHHHTTCEEECSCCEEEEEECTT-S-CEEEEESSSCE---EEES-EEEECSCEEESCTTSSTGGGTC
T ss_pred HHHHHCCCEEECCCEEEEEEEcCC-C-EEEEEEcCCCe---EEeC-EEEEeeCcccCCCCCCccccCc
Confidence 344567999999999999987653 2 23444122454 7886 69999998655554 344444
No 125
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=27.06 E-value=44 Score=34.31 Aligned_cols=54 Identities=15% Similarity=0.214 Sum_probs=40.2
Q ss_pred CCCCeEEeeCceEEEEEeeCCCCeEEEEEEEE--CCEEEEEEeeeEEEecCCCCCCHHHH
Q psy14643 437 NRPNLHISLNSQVTRVLIDSESKKAYGVEFVK--NGKKRIVFARKEIILSAGAINTPHIL 494 (801)
Q Consensus 437 ~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~--~g~~~~v~A~k~VILaAGai~SprLL 494 (801)
++.++++++++.|++|.-++ ++.+|.+.. +|+..++.++ .||+|.|..-++.+|
T Consensus 202 ~~~gV~v~~~~~v~~i~~~~---~~~~v~~~~~~~g~~~~i~~D-~vi~a~G~~p~~~~~ 257 (335)
T 2a87_A 202 NNDKIRFLTNHTVVAVDGDT---TVTGLRVRDTNTGAETTLPVT-GVFVAIGHEPRSGLV 257 (335)
T ss_dssp HCTTEEEECSEEEEEEECSS---SCCEEEEEEETTSCCEEECCS-CEEECSCEEECCTTT
T ss_pred ccCCcEEEeCceeEEEecCC---cEeEEEEEEcCCCceEEeecC-EEEEccCCccChhHh
Confidence 46799999999999997543 456677763 5655678886 699999976555544
No 126
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=27.01 E-value=40 Score=38.02 Aligned_cols=56 Identities=21% Similarity=0.130 Sum_probs=37.2
Q ss_pred HhhccccCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEECCEEEEEEeeeEEEecCCCCC
Q psy14643 430 AYIEPVRNRPNLHISLNSQVTRVLIDSESKKAYGVEFVKNGKKRIVFARKEIILSAGAIN 489 (801)
Q Consensus 430 ~~L~~~~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~~g~~~~v~A~k~VILaAGai~ 489 (801)
..|...+.+.+++|+.+++|+.|..+++ .++ |++...+...+++|+ .||.|.|+--
T Consensus 152 ~~L~~~a~~~gv~i~~~~~v~~l~~~~~--~v~-v~~~~~~G~~~~~a~-~vV~ADG~~S 207 (570)
T 3fmw_A 152 ALLAEHAREAGAEIPRGHEVTRLRQDAE--AVE-VTVAGPSGPYPVRAR-YGVGCDGGRS 207 (570)
T ss_dssp HHHHHHHHHHTEECCBSCEEEECCBCSS--CEE-EEEEETTEEEEEEES-EEEECSCSSC
T ss_pred HHHHHHHHhCCCEEEeCCEEEEEEEcCC--eEE-EEEEeCCCcEEEEeC-EEEEcCCCCc
Confidence 3444444445899999999999987764 232 455433333678895 7888888743
No 127
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=26.79 E-value=30 Score=37.53 Aligned_cols=57 Identities=16% Similarity=0.158 Sum_probs=40.4
Q ss_pred hhccccCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEECCEEEEEEeeeEEEecCCCCCCHHHH
Q psy14643 431 YIEPVRNRPNLHISLNSQVTRVLIDSESKKAYGVEFVKNGKKRIVFARKEIILSAGAINTPHIL 494 (801)
Q Consensus 431 ~L~~~~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~~g~~~~v~A~k~VILaAGai~SprLL 494 (801)
++....++.+++|++++.|++|.-++ +++.+|.. +|+ ++.++ .||+|.|..-+..+|
T Consensus 196 ~l~~~l~~~Gv~i~~~~~v~~i~~~~--~~v~~v~~--~g~--~i~~D-~vv~a~G~~p~~~ll 252 (452)
T 2cdu_A 196 ILAKDYEAHGVNLVLGSKVAAFEEVD--DEIITKTL--DGK--EIKSD-IAILCIGFRPNTELL 252 (452)
T ss_dssp HHHHHHHHTTCEEEESSCEEEEEEET--TEEEEEET--TSC--EEEES-EEEECCCEEECCGGG
T ss_pred HHHHHHHHCCCEEEcCCeeEEEEcCC--CeEEEEEe--CCC--EEECC-EEEECcCCCCCHHHH
Confidence 33344456799999999999998543 45655543 553 57786 699999987766654
No 128
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=26.54 E-value=46 Score=34.57 Aligned_cols=53 Identities=26% Similarity=0.340 Sum_probs=35.1
Q ss_pred hhccccCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEECCEEEEEEeeeEEEecCCCCCCH
Q psy14643 431 YIEPVRNRPNLHISLNSQVTRVLIDSESKKAYGVEFVKNGKKRIVFARKEIILSAGAINTP 491 (801)
Q Consensus 431 ~L~~~~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~~g~~~~v~A~k~VILaAGai~Sp 491 (801)
|+....++.+++++.++.|++|..+++ + +.+...+. ++.++ .||||+|+...|
T Consensus 93 ~l~~~~~~~gv~i~~~~~v~~i~~~~~-~----~~v~~~~g--~~~~d-~vVlAtG~~~~p 145 (369)
T 3d1c_A 93 YLQVVANHYELNIFENTVVTNISADDA-Y----YTIATTTE--TYHAD-YIFVATGDYNFP 145 (369)
T ss_dssp HHHHHHHHTTCEEECSCCEEEEEECSS-S----EEEEESSC--CEEEE-EEEECCCSTTSB
T ss_pred HHHHHHHHcCCeEEeCCEEEEEEECCC-e----EEEEeCCC--EEEeC-EEEECCCCCCcc
Confidence 554444456899999999999987653 1 22232222 46775 699999987544
No 129
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=26.42 E-value=40 Score=36.94 Aligned_cols=58 Identities=16% Similarity=0.181 Sum_probs=41.1
Q ss_pred cccCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEECCEEEEEEeeeEEEecCCCCCCHHHHHhhCC
Q psy14643 434 PVRNRPNLHISLNSQVTRVLIDSESKKAYGVEFVKNGKKRIVFARKEIILSAGAINTPHILMHSGV 499 (801)
Q Consensus 434 ~~~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~~g~~~~v~A~k~VILaAGai~SprLLl~SGI 499 (801)
...++.+++|++++.|++|.-+ +++..|.. ++. ++.++ .||+|+|..-++.+|..+|+
T Consensus 235 ~~l~~~Gv~i~~~~~v~~i~~~---~~v~~v~~--~~~--~i~~D-~vi~a~G~~p~~~~l~~~g~ 292 (480)
T 3cgb_A 235 KEADKHHIEILTNENVKAFKGN---ERVEAVET--DKG--TYKAD-LVLVSVGVKPNTDFLEGTNI 292 (480)
T ss_dssp HHHHHTTCEEECSCCEEEEEES---SBEEEEEE--TTE--EEECS-EEEECSCEEESCGGGTTSCC
T ss_pred HHHHHcCcEEEcCCEEEEEEcC---CcEEEEEE--CCC--EEEcC-EEEECcCCCcChHHHHhCCc
Confidence 3445678999999999999753 34555543 343 67886 79999998866666666654
No 130
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=26.42 E-value=77 Score=34.46 Aligned_cols=54 Identities=19% Similarity=0.302 Sum_probs=37.4
Q ss_pred ccCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEECCEEEEEEeeeEEEecCCCCCCHH
Q psy14643 435 VRNRPNLHISLNSQVTRVLIDSESKKAYGVEFVKNGKKRIVFARKEIILSAGAINTPH 492 (801)
Q Consensus 435 ~~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~~g~~~~v~A~k~VILaAGai~Spr 492 (801)
.+++.+++|++++.|++|..+++ .+ .|.+...+...++.++ .||+|.|..-+..
T Consensus 230 ~l~~~Gv~v~~~~~v~~i~~~~~--~~-~v~~~~~~g~~~~~~D-~vi~a~G~~p~~~ 283 (476)
T 3lad_A 230 ILTKQGLKILLGARVTGTEVKNK--QV-TVKFVDAEGEKSQAFD-KLIVAVGRRPVTT 283 (476)
T ss_dssp HHHHTTEEEEETCEEEEEEECSS--CE-EEEEESSSEEEEEEES-EEEECSCEEECCT
T ss_pred HHHhCCCEEEECCEEEEEEEcCC--EE-EEEEEeCCCcEEEECC-EEEEeeCCcccCC
Confidence 34567999999999999987552 22 3555532235678886 6999999764444
No 131
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=26.28 E-value=52 Score=35.56 Aligned_cols=61 Identities=15% Similarity=0.140 Sum_probs=40.1
Q ss_pred HhhccccCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEE--CCE-EEEEEeeeEEEecCCCCCCHHHH
Q psy14643 430 AYIEPVRNRPNLHISLNSQVTRVLIDSESKKAYGVEFVK--NGK-KRIVFARKEIILSAGAINTPHIL 494 (801)
Q Consensus 430 ~~L~~~~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~--~g~-~~~v~A~k~VILaAGai~SprLL 494 (801)
.||....++-+.+|+.+++|++|..++ +. ..|++.. +|+ ..++.++ .||+|.|+...|++.
T Consensus 119 ~~l~~~~~~~~~~i~~~t~V~~v~~~~--~~-~~V~~~~~~~G~~~~~~~~d-~VVvAtG~~s~p~~p 182 (447)
T 2gv8_A 119 EYQRIYAQPLLPFIKLATDVLDIEKKD--GS-WVVTYKGTKAGSPISKDIFD-AVSICNGHYEVPYIP 182 (447)
T ss_dssp HHHHHHHGGGGGGEECSEEEEEEEEET--TE-EEEEEEESSTTCCEEEEEES-EEEECCCSSSSBCBC
T ss_pred HHHHHHHHHhhCeEEeCCEEEEEEeCC--Ce-EEEEEeecCCCCeeEEEEeC-EEEECCCCCCCCCCC
Confidence 355443333355788899999998764 22 3344443 255 5567885 699999998778754
No 132
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=26.25 E-value=55 Score=36.59 Aligned_cols=51 Identities=14% Similarity=0.194 Sum_probs=35.9
Q ss_pred hhccccCCC-CeEEeeCceEEEEEeeCCCCeEEEEEEEECCEEEEEEeeeEEEecCCC
Q psy14643 431 YIEPVRNRP-NLHISLNSQVTRVLIDSESKKAYGVEFVKNGKKRIVFARKEIILSAGA 487 (801)
Q Consensus 431 ~L~~~~~~~-nl~v~~~a~V~rI~~d~~~~~a~gV~~~~~g~~~~v~A~k~VILaAGa 487 (801)
+|...+.+. +++|+.+ +|++|..+++ +++.+|+.. +|+ ++.|+ .||+|.|+
T Consensus 199 ~L~~~~~~~~Gv~i~~~-~V~~i~~~~~-g~~~~v~~~-~G~--~i~ad-~vI~A~G~ 250 (550)
T 2e4g_A 199 FLRRFATEKLGVRHVED-RVEHVQRDAN-GNIESVRTA-TGR--VFDAD-LFVDCSGF 250 (550)
T ss_dssp HHHHHHHHHSCCEEEEC-CEEEEEECTT-SCEEEEEET-TSC--EEECS-EEEECCGG
T ss_pred HHHHHHHhcCCcEEEEC-eEeEEEEcCC-CCEEEEEEC-CCC--EEECC-EEEECCCC
Confidence 443333344 8999999 9999988654 456677654 453 57885 79999996
No 133
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=26.19 E-value=31 Score=35.32 Aligned_cols=48 Identities=17% Similarity=0.313 Sum_probs=32.8
Q ss_pred CeEEeeCceEEEEEeeCCCCeEEEEEEEE-CCEEEEEEeeeEEEecCCCCCCHHHH
Q psy14643 440 NLHISLNSQVTRVLIDSESKKAYGVEFVK-NGKKRIVFARKEIILSAGAINTPHIL 494 (801)
Q Consensus 440 nl~v~~~a~V~rI~~d~~~~~a~gV~~~~-~g~~~~v~A~k~VILaAGai~SprLL 494 (801)
+++|++++.|++|..++++ |.+.. +|+ ....++ .||+|.|+-...++|
T Consensus 119 g~~i~~~~~v~~i~~~~~~-----~~v~~~~g~-~~~~a~-~vV~a~g~~~~~~~~ 167 (336)
T 1yvv_A 119 DMPVSFSCRITEVFRGEEH-----WNLLDAEGQ-NHGPFS-HVIIATPAPQASTLL 167 (336)
T ss_dssp TCCEECSCCEEEEEECSSC-----EEEEETTSC-EEEEES-EEEECSCHHHHGGGG
T ss_pred cCcEEecCEEEEEEEeCCE-----EEEEeCCCc-CccccC-EEEEcCCHHHHHHhh
Confidence 7899999999999987642 33333 443 334574 799999975555544
No 134
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=26.16 E-value=1.1e+02 Score=30.72 Aligned_cols=51 Identities=12% Similarity=0.045 Sum_probs=34.4
Q ss_pred cccCCCCeeeccCCcEEeeccC-CCCCCCCCChHHHHHHHHHHHHHHHhhhccCC
Q psy14643 742 TVVDNELRVHGIKNLRVADASV-MPILIAAHPMAPIYMIGEKCADMIKDTWSQGE 795 (801)
Q Consensus 742 ~VVD~~~rV~G~~NL~V~DaSv-fP~~~~~NPtlTi~AlA~R~Ad~I~~~~~~~~ 795 (801)
=+||.+++. .++|+|+++-.+ +|.. .......+.-|..+|..|.+.+..++
T Consensus 267 i~vd~~~~t-~~~~vya~GD~~~~~~~--~~~~~~A~~~g~~aa~~i~~~l~~~~ 318 (332)
T 3lzw_A 267 IVVKSTMET-NIEGFFAAGDICTYEGK--VNLIASGFGEAPTAVNNAKAYMDPKA 318 (332)
T ss_dssp EECCTTSBC-SSTTEEECGGGEECTTC--CCCHHHHHHHHHHHHHHHHHHHCTTS
T ss_pred EEeCCCCce-ecCCEEEccceecCCCC--cceEeeehhhHHHHHHHHHHhhChhh
Confidence 467888987 799999987655 2211 11233444557889999988887654
No 135
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=25.92 E-value=70 Score=38.63 Aligned_cols=60 Identities=12% Similarity=0.077 Sum_probs=45.8
Q ss_pred CCCCeEEeeCceEEEEEeeCCCCeEEEEEEEE------CCEEEEEEeeeEEEecCCCCCCHHHHHhhC
Q psy14643 437 NRPNLHISLNSQVTRVLIDSESKKAYGVEFVK------NGKKRIVFARKEIILSAGAINTPHILMHSG 498 (801)
Q Consensus 437 ~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~------~g~~~~v~A~k~VILaAGai~SprLLl~SG 498 (801)
++.+++|++++.|++|.-+++ +++.+|++.. +|+..++.++ .||+|.|..-+..||..+|
T Consensus 327 ~~~GV~v~~~~~v~~i~~~~~-~~v~~v~~~~~~~~~~~G~~~~i~~D-~Vv~a~G~~P~~~l~~~~~ 392 (965)
T 2gag_A 327 VADGVQVISGSVVVDTEADEN-GELSAIVVAELDEARELGGTQRFEAD-VLAVAGGFNPVVHLHSQRQ 392 (965)
T ss_dssp HHTTCCEEETEEEEEEEECTT-SCEEEEEEEEECTTCCEEEEEEEECS-EEEEECCEEECCHHHHHTT
T ss_pred HhCCeEEEeCCEeEEEeccCC-CCEEEEEEEeccccCCCCceEEEEcC-EEEECCCcCcChHHHHhCC
Confidence 356899999999999976412 5688888875 3556788996 7999999877777776554
No 136
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=25.89 E-value=28 Score=38.07 Aligned_cols=56 Identities=16% Similarity=0.214 Sum_probs=38.9
Q ss_pred cccCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEE--CCEEEEEEeeeEEEecCCCCCCHHH
Q psy14643 434 PVRNRPNLHISLNSQVTRVLIDSESKKAYGVEFVK--NGKKRIVFARKEIILSAGAINTPHI 493 (801)
Q Consensus 434 ~~~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~--~g~~~~v~A~k~VILaAGai~SprL 493 (801)
...++.+++|++++.|++|.-+++ . ..|.+.. +|+..++.++ .||+|+|..-+..+
T Consensus 226 ~~l~~~gv~i~~~~~v~~i~~~~~--~-~~v~~~~~~~g~~~~~~~D-~vv~a~G~~p~~~~ 283 (470)
T 1dxl_A 226 RSLEKQGMKFKLKTKVVGVDTSGD--G-VKLTVEPSAGGEQTIIEAD-VVLVSAGRTPFTSG 283 (470)
T ss_dssp HHHHHSSCCEECSEEEEEEECSSS--S-EEEEEEESSSCCCEEEEES-EEECCCCEEECCTT
T ss_pred HHHHHcCCEEEeCCEEEEEEEcCC--e-EEEEEEecCCCcceEEECC-EEEECCCCCcCCCC
Confidence 334467899999999999975542 2 3344442 4544578886 69999998766655
No 137
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=25.83 E-value=54 Score=36.07 Aligned_cols=58 Identities=14% Similarity=0.219 Sum_probs=39.8
Q ss_pred CCCCeEEeeCceEEEEEeeCCCCeEEEEEEE-ECCEEEEEEeeeEEEecCCCCCCHHH--HHhhCC
Q psy14643 437 NRPNLHISLNSQVTRVLIDSESKKAYGVEFV-KNGKKRIVFARKEIILSAGAINTPHI--LMHSGV 499 (801)
Q Consensus 437 ~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~-~~g~~~~v~A~k~VILaAGai~SprL--Ll~SGI 499 (801)
++. ++|++++.|++|..+++ .++ |++. .+|+..++.++ .||+|.|..-+..+ |..+|+
T Consensus 226 ~~~-V~i~~~~~v~~i~~~~~--~v~-v~~~~~~G~~~~i~~D-~Vi~a~G~~p~~~~l~l~~~gl 286 (492)
T 3ic9_A 226 NEE-FYFDAKARVISTIEKED--AVE-VIYFDKSGQKTTESFQ-YVLAATGRKANVDKLGLENTSI 286 (492)
T ss_dssp HTT-SEEETTCEEEEEEECSS--SEE-EEEECTTCCEEEEEES-EEEECSCCEESCSSSCGGGSCC
T ss_pred hhC-cEEEECCEEEEEEEcCC--EEE-EEEEeCCCceEEEECC-EEEEeeCCccCCCCCChhhcCC
Confidence 344 99999999999987653 332 4443 25766788896 79999998766555 334443
No 138
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=25.56 E-value=59 Score=35.60 Aligned_cols=57 Identities=7% Similarity=0.063 Sum_probs=40.6
Q ss_pred cccCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEE--CCEEEEEEeeeEEEecCCCCCCHHH
Q psy14643 434 PVRNRPNLHISLNSQVTRVLIDSESKKAYGVEFVK--NGKKRIVFARKEIILSAGAINTPHI 493 (801)
Q Consensus 434 ~~~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~--~g~~~~v~A~k~VILaAGai~SprL 493 (801)
..+++.+++|++++.|++|.-.++ +. ..|++.. +|+..++.++ .||+|.|-.-+..+
T Consensus 233 ~~l~~~gv~~~~~~~v~~i~~~~~-~~-~~v~~~~~~~g~~~~~~~D-~vi~a~G~~p~~~~ 291 (488)
T 3dgz_A 233 EHMESHGTQFLKGCVPSHIKKLPT-NQ-LQVTWEDHASGKEDTGTFD-TVLWAIGRVPETRT 291 (488)
T ss_dssp HHHHHTTCEEEETEEEEEEEECTT-SC-EEEEEEETTTTEEEEEEES-EEEECSCEEESCGG
T ss_pred HHHHHCCCEEEeCCEEEEEEEcCC-Cc-EEEEEEeCCCCeeEEEECC-EEEEcccCCcccCc
Confidence 344567899999999999976443 22 3355554 3676778886 69999997765555
No 139
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=25.50 E-value=52 Score=35.62 Aligned_cols=56 Identities=7% Similarity=0.007 Sum_probs=39.1
Q ss_pred hhccccCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEECCEEEEEEeeeEEEecCCCCCCHHHH
Q psy14643 431 YIEPVRNRPNLHISLNSQVTRVLIDSESKKAYGVEFVKNGKKRIVFARKEIILSAGAINTPHIL 494 (801)
Q Consensus 431 ~L~~~~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~~g~~~~v~A~k~VILaAGai~SprLL 494 (801)
.+...+++.+++|++++.|++|..++ +++ .|+. ++. ++.++ .||+|.|..-+..+|
T Consensus 194 ~l~~~l~~~GV~i~~~~~v~~i~~~~--~~v-~v~~--~~g--~i~aD-~Vv~A~G~~p~~~~l 249 (452)
T 3oc4_A 194 EVQKSLEKQAVIFHFEETVLGIEETA--NGI-VLET--SEQ--EISCD-SGIFALNLHPQLAYL 249 (452)
T ss_dssp HHHHHHHTTTEEEEETCCEEEEEECS--SCE-EEEE--SSC--EEEES-EEEECSCCBCCCSSC
T ss_pred HHHHHHHHcCCEEEeCCEEEEEEccC--CeE-EEEE--CCC--EEEeC-EEEECcCCCCChHHH
Confidence 33344557799999999999998644 344 4444 333 67886 699999987666544
No 140
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=24.99 E-value=35 Score=38.24 Aligned_cols=63 Identities=19% Similarity=0.368 Sum_probs=38.9
Q ss_pred hhccccCCCCe--EEeeCceEEEEEeeCCCCeEEEEEEEECCEEEEEEeeeEEEecCCCCCCHHHHHhhC
Q psy14643 431 YIEPVRNRPNL--HISLNSQVTRVLIDSESKKAYGVEFVKNGKKRIVFARKEIILSAGAINTPHILMHSG 498 (801)
Q Consensus 431 ~L~~~~~~~nl--~v~~~a~V~rI~~d~~~~~a~gV~~~~~g~~~~v~A~k~VILaAGai~SprLLl~SG 498 (801)
|+....++.++ +|..+++|+++.++++++ ...|+. .+|+ ++.++ .||+|.|....|++.-.-|
T Consensus 92 yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~-~w~V~~-~~G~--~~~ad-~lV~AtG~~s~p~~p~ipG 156 (545)
T 3uox_A 92 YVNRAADAMDVRKHYRFNTRVTAARYVENDR-LWEVTL-DNEE--VVTCR-FLISATGPLSASRMPDIKG 156 (545)
T ss_dssp HHHHHHHHHTCGGGEECSCCEEEEEEEGGGT-EEEEEE-TTTE--EEEEE-EEEECCCSCBC---CCCTT
T ss_pred HHHHHHHHcCCcCcEEECCEEEEEEEeCCCC-EEEEEE-CCCC--EEEeC-EEEECcCCCCCCcCCCCCC
Confidence 55444444444 688899999999987533 223333 2454 56785 6999999988888754333
No 141
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=24.05 E-value=72 Score=34.92 Aligned_cols=62 Identities=18% Similarity=0.303 Sum_probs=42.8
Q ss_pred cccCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEE--CCEEEEEEeeeEEEecCCCCCCHHH--HHhhCC
Q psy14643 434 PVRNRPNLHISLNSQVTRVLIDSESKKAYGVEFVK--NGKKRIVFARKEIILSAGAINTPHI--LMHSGV 499 (801)
Q Consensus 434 ~~~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~--~g~~~~v~A~k~VILaAGai~SprL--Ll~SGI 499 (801)
..+++.+++|++++.|++|.-+++ . ..|.+.. +|+..++.++ .||+|.|-.-+..+ |..+|+
T Consensus 247 ~~l~~~gV~v~~~~~v~~i~~~~~--~-~~v~~~~~~~g~~~~i~~D-~Vi~a~G~~p~~~~l~l~~~g~ 312 (491)
T 3urh_A 247 RMLTKQGIDFKLGAKVTGAVKSGD--G-AKVTFEPVKGGEATTLDAE-VVLIATGRKPSTDGLGLAKAGV 312 (491)
T ss_dssp HHHHHTTCEEECSEEEEEEEEETT--E-EEEEEEETTSCCCEEEEES-EEEECCCCEECCTTSCHHHHTC
T ss_pred HHHHhCCCEEEECCeEEEEEEeCC--E-EEEEEEecCCCceEEEEcC-EEEEeeCCccCCCccCchhcCc
Confidence 344567999999999999987652 2 3355553 2555678886 69999997655554 555565
No 142
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=23.99 E-value=40 Score=36.03 Aligned_cols=58 Identities=14% Similarity=0.270 Sum_probs=42.1
Q ss_pred hccccCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEECCEEEEEEeeeEEEecCCCCCCHHHHHhhCCC
Q psy14643 432 IEPVRNRPNLHISLNSQVTRVLIDSESKKAYGVEFVKNGKKRIVFARKEIILSAGAINTPHILMHSGVG 500 (801)
Q Consensus 432 L~~~~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~~g~~~~v~A~k~VILaAGai~SprLLl~SGIG 500 (801)
+....++.+++|++++.|++|. + + +|++. +|+ ++.++ .||+|.|..-+..+|..+|+-
T Consensus 193 l~~~l~~~GV~i~~~~~v~~i~-~---~---~v~~~-~g~--~i~~D-~vi~a~G~~p~~~l~~~~gl~ 250 (408)
T 2gqw_A 193 VARYHAAQGVDLRFERSVTGSV-D---G---VVLLD-DGT--RIAAD-MVVVGIGVLANDALARAAGLA 250 (408)
T ss_dssp HHHHHHHTTCEEEESCCEEEEE-T---T---EEEET-TSC--EEECS-EEEECSCEEECCHHHHHHTCC
T ss_pred HHHHHHHcCcEEEeCCEEEEEE-C---C---EEEEC-CCC--EEEcC-EEEECcCCCccHHHHHhCCCC
Confidence 3334456799999999999997 2 2 34443 453 57786 799999988776788888763
No 143
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=23.73 E-value=44 Score=37.23 Aligned_cols=53 Identities=11% Similarity=0.130 Sum_probs=36.7
Q ss_pred HhhccccCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEECCEEEEEEeeeEEEecCCCC
Q psy14643 430 AYIEPVRNRPNLHISLNSQVTRVLIDSESKKAYGVEFVKNGKKRIVFARKEIILSAGAI 488 (801)
Q Consensus 430 ~~L~~~~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~~g~~~~v~A~k~VILaAGai 488 (801)
.+|...+.+.+++++.+ +|+.|..+++ +.+.+|... +|+ ++.|+ .||+|.|+-
T Consensus 169 ~~L~~~a~~~gv~~~~~-~v~~i~~~~~-g~~~~v~~~-~g~--~i~ad-~vV~A~G~~ 221 (538)
T 2aqj_A 169 DFLKRWAVERGVNRVVD-EVVDVRLNNR-GYISNLLTK-EGR--TLEAD-LFIDCSGMR 221 (538)
T ss_dssp HHHHHHHHHTTCEEEEC-CEEEEEECTT-SCEEEEEET-TSC--EECCS-EEEECCGGG
T ss_pred HHHHHHHHHCCCEEEEe-eEeEEEEcCC-CcEEEEEEC-CCc--EEEeC-EEEECCCCc
Confidence 34444444568999999 8999988654 456666553 453 57885 799999963
No 144
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=23.59 E-value=51 Score=36.60 Aligned_cols=53 Identities=8% Similarity=0.041 Sum_probs=36.3
Q ss_pred HHhhccccCC-CCeEEeeCceEEEEEeeCCCCeEEEEEEEECCEEEEEEeeeEEEecCCC
Q psy14643 429 HAYIEPVRNR-PNLHISLNSQVTRVLIDSESKKAYGVEFVKNGKKRIVFARKEIILSAGA 487 (801)
Q Consensus 429 ~~~L~~~~~~-~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~~g~~~~v~A~k~VILaAGa 487 (801)
..+|...+.+ .+++++.+ +|++|..+++ +.+++|+.. +|. ++.|+ .||.|.|+
T Consensus 178 ~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~-g~~~~v~~~-~g~--~i~ad-~vV~AdG~ 231 (526)
T 2pyx_A 178 SQLLTEHCTQKLGVTHIRD-HVSQIINNQH-GDIEKLITK-QNG--EISGQ-LFIDCTGA 231 (526)
T ss_dssp HHHHHHHHHHTSCCEEEEC-CEEEEEECTT-SCEEEEEES-SSC--EEECS-EEEECSGG
T ss_pred HHHHHHHHHhcCCCEEEEe-EEEEEEecCC-CcEEEEEEC-CCC--EEEcC-EEEECCCc
Confidence 3344444444 78999999 6999988654 455666553 444 38885 79999996
No 145
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=23.57 E-value=96 Score=33.79 Aligned_cols=43 Identities=12% Similarity=0.255 Sum_probs=30.1
Q ss_pred CCCCeEEeeCceEEEEEeeCCCCeEEEEEEE-ECCEEEEEEeeeEEEecCCC
Q psy14643 437 NRPNLHISLNSQVTRVLIDSESKKAYGVEFV-KNGKKRIVFARKEIILSAGA 487 (801)
Q Consensus 437 ~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~-~~g~~~~v~A~k~VILaAGa 487 (801)
++.|++|++++.|++|..+++ . |.+. .+|+ ++.|+ .||+|+|.
T Consensus 267 ~~g~~~i~~~~~V~~i~~~~~--~---v~v~~~~g~--~~~ad-~vI~a~~~ 310 (495)
T 2vvm_A 267 GTGRLGYVFGCPVRSVVNERD--A---ARVTARDGR--EFVAK-RVVCTIPL 310 (495)
T ss_dssp TTTCEEEESSCCEEEEEECSS--S---EEEEETTCC--EEEEE-EEEECCCG
T ss_pred hcCceEEEeCCEEEEEEEcCC--E---EEEEECCCC--EEEcC-EEEECCCH
Confidence 343499999999999987653 2 3333 2443 47785 69999995
No 146
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=23.40 E-value=34 Score=37.67 Aligned_cols=60 Identities=15% Similarity=0.250 Sum_probs=39.5
Q ss_pred cccCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEECCEEEEEEeeeEEEecCCCCCCHH-H-HHhhCC
Q psy14643 434 PVRNRPNLHISLNSQVTRVLIDSESKKAYGVEFVKNGKKRIVFARKEIILSAGAINTPH-I-LMHSGV 499 (801)
Q Consensus 434 ~~~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~~g~~~~v~A~k~VILaAGai~Spr-L-Ll~SGI 499 (801)
..+++.+++|++++.|++|..+++ + ...|++. +|+ ++.++ .||+|+|..-+.. | |..+|+
T Consensus 239 ~~l~~~GV~i~~~~~v~~i~~~~~-~-~~~v~~~-~G~--~i~~D-~vv~a~G~~p~~~~L~l~~~gl 300 (490)
T 1fec_A 239 EQLRANGINVRTHENPAKVTKNAD-G-TRHVVFE-SGA--EADYD-VVMLAIGRVPRSQTLQLEKAGV 300 (490)
T ss_dssp HHHHHTTEEEEETCCEEEEEECTT-S-CEEEEET-TSC--EEEES-EEEECSCEEESCTTSCGGGGTC
T ss_pred HHHHhCCCEEEeCCEEEEEEEcCC-C-EEEEEEC-CCc--EEEcC-EEEEccCCCcCccccCchhcCc
Confidence 344567999999999999986543 2 2344432 454 57886 6999999765444 3 344454
No 147
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=22.91 E-value=28 Score=39.13 Aligned_cols=61 Identities=30% Similarity=0.507 Sum_probs=40.5
Q ss_pred HhhccccCCCCe--EEeeCceEEEEEeeCCCCeEEEEEEEECCEEEEEEeeeEEEecCCCCCCHHHHH
Q psy14643 430 AYIEPVRNRPNL--HISLNSQVTRVLIDSESKKAYGVEFVKNGKKRIVFARKEIILSAGAINTPHILM 495 (801)
Q Consensus 430 ~~L~~~~~~~nl--~v~~~a~V~rI~~d~~~~~a~gV~~~~~g~~~~v~A~k~VILaAGai~SprLLl 495 (801)
.|+....++.++ +|+.+++|+++.+++++++ ..|+. .+|+ ++.++ .||+|.|....|++.-
T Consensus 103 ~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~-w~V~~-~~G~--~i~ad-~lV~AtG~~s~p~~p~ 165 (549)
T 4ap3_A 103 AYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLR-WTVRT-DRGD--EVSAR-FLVVAAGPLSNANTPA 165 (549)
T ss_dssp HHHHHHHHHTTCGGGEECSCCEEEEEEETTTTE-EEEEE-TTCC--EEEEE-EEEECCCSEEECCCCC
T ss_pred HHHHHHHHHcCCCccEEECCEEEEEEEcCCCCE-EEEEE-CCCC--EEEeC-EEEECcCCCCCCCCCC
Confidence 355544445555 7889999999999875332 23333 2454 46785 6999999876666543
No 148
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=22.85 E-value=38 Score=37.35 Aligned_cols=60 Identities=20% Similarity=0.329 Sum_probs=39.7
Q ss_pred cccCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEECCEEEEEEeeeEEEecCCCCCCHH-H-HHhhCC
Q psy14643 434 PVRNRPNLHISLNSQVTRVLIDSESKKAYGVEFVKNGKKRIVFARKEIILSAGAINTPH-I-LMHSGV 499 (801)
Q Consensus 434 ~~~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~~g~~~~v~A~k~VILaAGai~Spr-L-Ll~SGI 499 (801)
..+++.+++|++++.|++|.-+++ + ...|++. +|+ ++.++ .||+|+|..-+.. | |..+|+
T Consensus 243 ~~l~~~GV~i~~~~~v~~i~~~~~-~-~~~v~~~-~G~--~i~~D-~vv~a~G~~p~~~~L~l~~~gl 304 (495)
T 2wpf_A 243 KQLTANGIEIMTNENPAKVSLNTD-G-SKHVTFE-SGK--TLDVD-VVMMAIGRIPRTNDLQLGNVGV 304 (495)
T ss_dssp HHHHHTTCEEEESCCEEEEEECTT-S-CEEEEET-TSC--EEEES-EEEECSCEEECCGGGTGGGTTC
T ss_pred HHHHhCCCEEEeCCEEEEEEEcCC-c-eEEEEEC-CCc--EEEcC-EEEECCCCcccccccchhhcCc
Confidence 334567899999999999986543 2 2344443 454 57886 6999999865554 3 334454
No 149
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=22.84 E-value=48 Score=35.66 Aligned_cols=60 Identities=18% Similarity=0.222 Sum_probs=42.8
Q ss_pred hhccccCCCCeEEeeCceEEEEEeeCCCCeEEEEEEE-ECCEEEEEEeeeEEEecCCCCCCHHHHHhhCC
Q psy14643 431 YIEPVRNRPNLHISLNSQVTRVLIDSESKKAYGVEFV-KNGKKRIVFARKEIILSAGAINTPHILMHSGV 499 (801)
Q Consensus 431 ~L~~~~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~-~~g~~~~v~A~k~VILaAGai~SprLLl~SGI 499 (801)
++....++.|+++++++.|++|. + + ++.+. .+|...++.++ .||+++|.-. +.++..||.
T Consensus 205 ~l~~~l~~~GV~~~~~~~v~~v~--~--~---~~~~~~~~g~~~~i~~d-~vi~~~G~~~-~~~~~~~~~ 265 (430)
T 3hyw_A 205 LVEDLFAERNIDWIANVAVKAIE--P--D---KVIYEDLNGNTHEVPAK-FTMFMPSFQG-PEVVASAGD 265 (430)
T ss_dssp HHHHHHHHTTCEEECSCEEEEEC--S--S---EEEEECTTSCEEEEECS-EEEEECEEEC-CHHHHTTCT
T ss_pred HHHHHHHhCCeEEEeCceEEEEe--C--C---ceEEEeeCCCceEeecc-eEEEeccCCC-chHHHhccc
Confidence 55455567799999999999984 2 2 23444 35667789996 7999998655 467777764
No 150
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=22.81 E-value=55 Score=34.90 Aligned_cols=49 Identities=18% Similarity=0.280 Sum_probs=31.8
Q ss_pred hhccccCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEECCEEEEEEeeeEEEecCCC
Q psy14643 431 YIEPVRNRPNLHISLNSQVTRVLIDSESKKAYGVEFVKNGKKRIVFARKEIILSAGA 487 (801)
Q Consensus 431 ~L~~~~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~~g~~~~v~A~k~VILaAGa 487 (801)
.+..+.++.+ +|++++.|++|..+++ .++ |++ .+|+ ++.|+ .||+|+|.
T Consensus 209 l~~~~~~~~g-~i~~~~~V~~i~~~~~--~v~-v~~-~~g~--~~~ad-~vi~a~~~ 257 (431)
T 3k7m_X 209 LVDAMSQEIP-EIRLQTVVTGIDQSGD--VVN-VTV-KDGH--AFQAH-SVIVATPM 257 (431)
T ss_dssp HHHHHHTTCS-CEESSCCEEEEECSSS--SEE-EEE-TTSC--CEEEE-EEEECSCG
T ss_pred HHHHHHhhCC-ceEeCCEEEEEEEcCC--eEE-EEE-CCCC--EEEeC-EEEEecCc
Confidence 3333344556 9999999999987653 232 333 2453 57885 69999974
No 151
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=22.78 E-value=45 Score=36.51 Aligned_cols=58 Identities=10% Similarity=0.071 Sum_probs=41.2
Q ss_pred cccCCCCeEEeeCceEEEEEeeCCCCeEEEEEEEE--CCEEEEEEeeeEEEecCCCCCCHHHH
Q psy14643 434 PVRNRPNLHISLNSQVTRVLIDSESKKAYGVEFVK--NGKKRIVFARKEIILSAGAINTPHIL 494 (801)
Q Consensus 434 ~~~~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~--~g~~~~v~A~k~VILaAGai~SprLL 494 (801)
..+++.+++|++++.|++|..+++ +. ..|++.. .++..++.++ .||+|.|..-+..+|
T Consensus 235 ~~l~~~Gv~i~~~~~v~~i~~~~~-~~-~~v~~~~~~~~~~~~~~~D-~vi~a~G~~p~~~~l 294 (483)
T 3dgh_A 235 ASMEERGIPFLRKTVPLSVEKQDD-GK-LLVKYKNVETGEESEDVYD-TVLWAIGRKGLVDDL 294 (483)
T ss_dssp HHHHHTTCCEEETEEEEEEEECTT-SC-EEEEEEETTTCCEEEEEES-EEEECSCEEECCGGG
T ss_pred HHHHhCCCEEEeCCEEEEEEEcCC-Cc-EEEEEecCCCCceeEEEcC-EEEECcccccCcCcC
Confidence 344567999999999999987553 23 2466654 2556788896 699999986555554
No 152
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=22.19 E-value=50 Score=37.09 Aligned_cols=48 Identities=15% Similarity=0.129 Sum_probs=34.2
Q ss_pred cccCCCCeeeccCCcEEee---ccCCC-CCCCCCChHHHHHHHHHHHHHHHhhh
Q psy14643 742 TVVDNELRVHGIKNLRVAD---ASVMP-ILIAAHPMAPIYMIGEKCADMIKDTW 791 (801)
Q Consensus 742 ~VVD~~~rV~G~~NL~V~D---aSvfP-~~~~~NPtlTi~AlA~R~Ad~I~~~~ 791 (801)
-|+|.+++ -++|||.++ ++++- .-+++|-.+..+..+.++++.+.+..
T Consensus 517 ~vl~~~g~--~I~GLyAaGe~~~g~~g~~~l~g~sl~~~~~fGr~Ag~~aa~~~ 568 (571)
T 1y0p_A 517 EVMNAKKQ--VIPGLYGAGEVTGGVHGANRLGGNAISDIITFGRLAGEEAAKYS 568 (571)
T ss_dssp EEECTTSC--EEEEEEECSTTEESSSTTSCCTTHHHHHHHHHHHHHHHHHHHHC
T ss_pred eEECCCCC--CcCCcEeceEcCCCCcCCCCCchHhHHHHHHHHHHHHHHHHHHh
Confidence 44444444 389999986 44553 23567888888999999999987654
No 153
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=21.94 E-value=41 Score=37.23 Aligned_cols=45 Identities=20% Similarity=0.144 Sum_probs=31.9
Q ss_pred cccCCCCeeeccCCcEEe-eccCCCCCCCCCChHHHHHHHHHHHHHHHh
Q psy14643 742 TVVDNELRVHGIKNLRVA-DASVMPILIAAHPMAPIYMIGEKCADMIKD 789 (801)
Q Consensus 742 ~VVD~~~rV~G~~NL~V~-DaSvfP~~~~~NPtlTi~AlA~R~Ad~I~~ 789 (801)
=+||+++|+-+++|+|++ |++..|..+.+ -..+.-|..+|+.|..
T Consensus 353 I~Vd~~lq~~~~~~IfAiGD~a~~~~p~~a---~~A~qqg~~~A~ni~~ 398 (502)
T 4g6h_A 353 LAVNDFLQVKGSNNIFAIGDNAFAGLPPTA---QVAHQEAEYLAKNFDK 398 (502)
T ss_dssp EEBCTTSBBTTCSSEEECGGGEESSSCCCH---HHHHHHHHHHHHHHHH
T ss_pred eeECCccccCCCCCEEEEEcccCCCCCCch---HHHHHHHHHHHHHHHH
Confidence 469999999999999987 66666644322 2345566677777754
No 154
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=21.81 E-value=45 Score=37.26 Aligned_cols=49 Identities=22% Similarity=0.466 Sum_probs=34.8
Q ss_pred eEEeeCceEEEEEeeCCCCeEEEEEEEECCEEEEEEeeeEEEecCCCCCCHHHH
Q psy14643 441 LHISLNSQVTRVLIDSESKKAYGVEFVKNGKKRIVFARKEIILSAGAINTPHIL 494 (801)
Q Consensus 441 l~v~~~a~V~rI~~d~~~~~a~gV~~~~~g~~~~v~A~k~VILaAGai~SprLL 494 (801)
.+|+.+++|+++.+++++++ ..|+. .+|+ ++.++ .||+|.|+...|++.
T Consensus 111 ~~i~~~~~V~~~~~~~~~~~-w~V~~-~~G~--~~~ad-~vV~AtG~~s~p~~p 159 (542)
T 1w4x_A 111 SGITFHTTVTAAAFDEATNT-WTVDT-NHGD--RIRAR-YLIMASGQLSVPQLP 159 (542)
T ss_dssp GGEECSCCEEEEEEETTTTE-EEEEE-TTCC--EEEEE-EEEECCCSCCCCCCC
T ss_pred ceEEcCcEEEEEEEcCCCCe-EEEEE-CCCC--EEEeC-EEEECcCCCCCCCCC
Confidence 46888999999999875333 22433 2454 47785 799999998777754
No 155
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=21.47 E-value=28 Score=37.93 Aligned_cols=50 Identities=12% Similarity=0.142 Sum_probs=33.8
Q ss_pred CCCCeEEeeCceEEEEEeeCCCCeEEEEEEEECCEEEEEEeeeEEEecCCCCCCHHH
Q psy14643 437 NRPNLHISLNSQVTRVLIDSESKKAYGVEFVKNGKKRIVFARKEIILSAGAINTPHI 493 (801)
Q Consensus 437 ~~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~~g~~~~v~A~k~VILaAGai~SprL 493 (801)
...+.+|++++.|++|..+++ .+..|.. ++. ++.|+ .||+|+++-...+|
T Consensus 245 ~~~g~~i~~~~~V~~i~~~~~--~~~~v~~--~~~--~~~ad-~vv~a~p~~~~~~l 294 (477)
T 3nks_A 245 TSRGVSVLRGQPVCGLSLQAE--GRWKVSL--RDS--SLEAD-HVISAIPASVLSEL 294 (477)
T ss_dssp HHTTCEEECSCCCCEEEECGG--GCEEEEC--SSC--EEEES-EEEECSCHHHHHHH
T ss_pred HhcCCEEEeCCEEEEEEEcCC--ceEEEEE--CCe--EEEcC-EEEECCCHHHHHHh
Confidence 345889999999999988653 2233432 343 47785 69999986444444
No 156
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=20.97 E-value=1.1e+02 Score=33.36 Aligned_cols=53 Identities=15% Similarity=0.226 Sum_probs=39.4
Q ss_pred CCCeEEeeCceEEEEEeeCCCCeEEEEEEEE--------------CCEEEEEEeeeEEEecCCCCCCH
Q psy14643 438 RPNLHISLNSQVTRVLIDSESKKAYGVEFVK--------------NGKKRIVFARKEIILSAGAINTP 491 (801)
Q Consensus 438 ~~nl~v~~~a~V~rI~~d~~~~~a~gV~~~~--------------~g~~~~v~A~k~VILaAGai~Sp 491 (801)
+.+++|++++.+.+|.-+++++++.+|++.. +|+..++.++ .||+|.|.--++
T Consensus 269 ~~gv~~~~~~~~~~i~~~~~~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d-~Vi~a~G~~p~~ 335 (460)
T 1cjc_A 269 SRAWGLRFFRSPQQVLPSPDGRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCG-LVLSSIGYKSRP 335 (460)
T ss_dssp SEEEEEECSEEEEEEEECTTSSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECS-EEEECCCEECCC
T ss_pred CceEEEECCCChheEEcCCCCceEEEEEEEEEEEccccCCCcccCCCceEEEEcC-EEEECCCCCCCC
Confidence 3689999999999997543221688887752 3555778886 799999987766
No 157
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=20.52 E-value=65 Score=36.11 Aligned_cols=49 Identities=18% Similarity=0.175 Sum_probs=34.0
Q ss_pred cccCCCCeeeccCCcEEeec---cCCC-CCCCCCChHHHHHHHHHHHHHHHhhhc
Q psy14643 742 TVVDNELRVHGIKNLRVADA---SVMP-ILIAAHPMAPIYMIGEKCADMIKDTWS 792 (801)
Q Consensus 742 ~VVD~~~rV~G~~NL~V~Da---SvfP-~~~~~NPtlTi~AlA~R~Ad~I~~~~~ 792 (801)
-|+|.+++ -++|||.++- +++- .-+++|-.+..+..+.++++.+.+..+
T Consensus 512 ~vl~~~g~--~I~GLyAaGe~~~g~~g~~~~~g~sl~~~~v~Gr~Ag~~aa~~~~ 564 (566)
T 1qo8_A 512 SVLDLQSK--PIDGLFAAGEVTGGVHGYNRLGGNAIADTVVFGRIAGDNAAKHAL 564 (566)
T ss_dssp EEEBTTSC--EEEEEEECSTTBCSSSTTCCCTTHHHHHHHHHHHHHHHHHHHHHC
T ss_pred eEECCCCC--EeCCEEecccccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHhh
Confidence 44444444 4899999974 4442 234677778888899999999877554
Done!