BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>psy14654
MSTLSIEVVYPEVMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELT
VRHLHKLRRQQSLGLTPEAAYADRFKAGFTHCAAEVSQYLASSMQQHQQQPSTEPTIDPS
SG

High Scoring Gene Products

Symbol, full name Information P value
E(spl)m3-HLH
Enhancer of split m3, helix-loop-helix
protein from Drosophila melanogaster 3.9e-24
E(spl)mbeta-HLH
Enhancer of split mbeta, helix-loop-helix
protein from Drosophila melanogaster 5.3e-24
E(spl)mgamma-HLH
Enhancer of split mgamma, helix-loop-helix
protein from Drosophila melanogaster 3.8e-23
E(spl)mdelta-HLH
Enhancer of split mdelta, helix-loop-helix
protein from Drosophila melanogaster 5.1e-19
hes4-a
Transcription factor HES-4-A
protein from Xenopus laevis 1.0e-18
HES4
Transcription factor HES-4
protein from Homo sapiens 1.7e-18
her9
hairy-related 9
gene_product from Danio rerio 2.7e-18
E(spl)m7-HLH
Enhancer of split m7, helix-loop-helix
protein from Drosophila melanogaster 3.6e-18
HES4
Transcription factor HES-4
protein from Homo sapiens 7.5e-18
HES4
Uncharacterized protein
protein from Bos taurus 1.2e-17
LOC100739264
Uncharacterized protein
protein from Sus scrofa 1.2e-17
dpn
deadpan
protein from Drosophila melanogaster 1.5e-17
HES4
Uncharacterized protein
protein from Canis lupus familiaris 2.5e-17
HES4
Uncharacterized protein
protein from Canis lupus familiaris 2.5e-17
HES4
Uncharacterized protein
protein from Canis lupus familiaris 2.5e-17
h
hairy
protein from Drosophila melanogaster 1.1e-16
hes1-a
Transcription factor HES-1-A
protein from Xenopus laevis 1.4e-16
hes4
Transcription factor HES-4
protein from Xenopus (Silurana) tropicalis 1.4e-16
hes4-b
Transcription factor HES-4-B
protein from Xenopus laevis 1.4e-16
HES1
Transcription factor HES-1
protein from Bos taurus 2.3e-16
HES1
Transcription factor HES-1
protein from Bos taurus 2.3e-16
HES1
Transcription factor HES-1
protein from Homo sapiens 2.3e-16
HES1
Uncharacterized protein
protein from Sus scrofa 2.3e-16
Hes1
hairy and enhancer of split 1 (Drosophila)
protein from Mus musculus 2.3e-16
Hes1
hairy and enhancer of split 1 (Drosophila)
gene from Rattus norvegicus 2.3e-16
hes1
Transcription factor HES-1
protein from Xenopus (Silurana) tropicalis 2.9e-16
hes1-b
Transcription factor HES-1-B
protein from Xenopus laevis 2.9e-16
HES1
Transcription factor HES-1
protein from Gallus gallus 4.7e-16
Her
HES-related
protein from Drosophila melanogaster 1.3e-15
her6
hairy-related 6
gene_product from Danio rerio 1.5e-15
her3
hairy-related 3
gene_product from Danio rerio 2.3e-14
Hey
Hairy/E(spl)-related with YRPW motif
protein from Drosophila melanogaster 3.3e-14
her8a
hairy-related 8a
gene_product from Danio rerio 3.9e-14
HES2
Uncharacterized protein
protein from Bos taurus 5.6e-13
HES2
Transcription factor HES-2
protein from Homo sapiens 7.1e-13
her8.2
hairy-related 8.2
gene_product from Danio rerio 9.1e-13
HES2
Uncharacterized protein
protein from Sus scrofa 1.9e-12
E(spl)m8-HLH
Enhancer of split m8, helix-loop-helix
protein from Drosophila melanogaster 2.4e-12
hes2
Transcription factor HES-2
protein from Xenopus laevis 3.9e-12
Hes2
hairy and enhancer of split 2 (Drosophila)
gene from Rattus norvegicus 6.4e-12
heyl
hairy/enhancer-of-split related with YRPW motif-like
gene_product from Danio rerio 8.7e-12
Side
similar to Deadpan
protein from Drosophila melanogaster 9.7e-12
HES2
Uncharacterized protein
protein from Canis lupus familiaris 1.0e-11
hes2.1
hairy and enhancer of split 2, tandem duplicate 1
gene_product from Danio rerio 1.0e-11
HEY2
Uncharacterized protein
protein from Canis lupus familiaris 2.2e-11
hes2.2
hairy and enhancer of split 2, tandem duplicate 2
gene_product from Danio rerio 2.8e-11
her7
hairy and enhancer of split related-7
gene_product from Danio rerio 3.1e-11
Hes7
hairy and enhancer of split 7 (Drosophila)
protein from Mus musculus 3.8e-11
Hes7
hairy and enhancer of split 7 (Drosophila)
gene from Rattus norvegicus 3.8e-11
HES5
Uncharacterized protein
protein from Canis lupus familiaris 4.5e-11
HES7
Transcription factor HES-7
protein from Homo sapiens 4.8e-11
HEY1
Hairy/enhancer-of-split-related with YRPW motif protein 1
protein from Homo sapiens 5.8e-11
HES2
Transcription factor HES-2
protein from Homo sapiens 5.8e-11
Hey2
hairy/enhancer-of-split related with YRPW motif 2
protein from Mus musculus 6.4e-11
Hes2
hairy and enhancer of split 2 (Drosophila)
protein from Mus musculus 7.4e-11
Hes6
hairy and enhancer of split 6 (Drosophila)
gene from Rattus norvegicus 7.4e-11
HEY2
Uncharacterized protein
protein from Bos taurus 8.1e-11
HEY2
Hairy/enhancer-of-split related with YRPW motif protein 2
protein from Homo sapiens 8.1e-11
HEY2
Uncharacterized protein
protein from Sus scrofa 8.1e-11
HEY2
Hairy/enhancer-of-split-related with YRPW motif protein 2
protein from Homo sapiens 1.1e-10
lin-22 gene from Caenorhabditis elegans 1.2e-10
lin-22
Lin-22
protein from Caenorhabditis elegans 1.2e-10
her12
hairy-related 12
gene_product from Danio rerio 1.2e-10
hey2
hairy/enhancer-of-split related with YRPW motif 2
gene_product from Danio rerio 1.2e-10
Hey1
hairy/enhancer-of-split related with YRPW motif 1
protein from Mus musculus 1.2e-10
HEY1
Hairy/enhancer-of-split related with YRPW motif protein 1
protein from Bos taurus 1.7e-10
HEY1
Hairy/enhancer-of-split-related with YRPW motif protein 1
protein from Canis lupus familiaris 1.7e-10
HEY1
Hairy/enhancer-of-split related with YRPW motif protein 1
protein from Canis lupus familiaris 1.7e-10
HEY1
Hairy/enhancer-of-split related with YRPW motif protein 1
protein from Homo sapiens 1.7e-10
HEY1
Uncharacterized protein
protein from Sus scrofa 1.7e-10
DKFZp459C0535
Putative uncharacterized protein DKFZp459C0535
protein from Pongo abelii 1.7e-10
E(spl)m5-HLH
Enhancer of split m5, helix-loop-helix
protein from Drosophila melanogaster 2.0e-10
E1B6Z2
Uncharacterized protein
protein from Bos taurus 2.5e-10
Heyl
hairy/enhancer-of-split related with YRPW motif-like
protein from Mus musculus 2.7e-10
Heyl
hairy/enhancer-of-split related with YRPW motif-like
gene from Rattus norvegicus 2.7e-10
HEYL
Hairy/enhancer-of-split-related with YRPW motif-like protein
protein from Homo sapiens 2.7e-10
PABPC4
Uncharacterized protein
protein from Canis lupus familiaris 3.4e-10
HEYL
Hairy/enhancer-of-split related with YRPW motif-like protein
protein from Bos taurus 3.5e-10
HEYL
Hairy/enhancer-of-split related with YRPW motif-like protein
protein from Homo sapiens 3.5e-10
LOC100518256
Uncharacterized protein
protein from Sus scrofa 3.5e-10
HEYL
Hairy/enhancer-of-split-related with YRPW motif-like protein
protein from Bos taurus 3.5e-10
HES5
HES5 protein
protein from Bos taurus 4.1e-10
hey1
Hairy/enhancer-of-split related with YRPW motif protein 1
protein from Xenopus laevis 4.3e-10
hey1
Hairy/enhancer-of-split related with YRPW motif protein 1
protein from Xenopus (Silurana) tropicalis 4.5e-10
HES4
Transcription factor HES-4
protein from Homo sapiens 5.2e-10
HES5
Transcription factor HES-5
protein from Homo sapiens 5.2e-10
LOC100037036
LOC100037036 protein
protein from Xenopus laevis 8.4e-10
her15.1
hairy and enhancer of split-related 15, tandem duplicate 1
gene_product from Danio rerio 8.4e-10
her13
hairy-related 13
gene_product from Danio rerio 8.4e-10
HES5
Hairy and enhancer of split 5
protein from Gallus gallus 1.1e-09
Hes5
hairy and enhancer of split 5 (Drosophila)
protein from Mus musculus 1.1e-09
Hes5
hairy and enhancer of split 5 (Drosophila)
gene from Rattus norvegicus 1.1e-09
HES6
Transcription cofactor HES-6
protein from Homo sapiens 1.1e-09
Hes6
hairy and enhancer of split 6
protein from Mus musculus 1.1e-09
LOC100622397
Uncharacterized protein
protein from Sus scrofa 1.4e-09

The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy14654
        (122 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

FB|FBgn0002609 - symbol:E(spl)m3-HLH "Enhancer of split m...   253  3.9e-24   2
FB|FBgn0002733 - symbol:E(spl)mbeta-HLH "Enhancer of spli...   275  5.3e-24   1
FB|FBgn0002735 - symbol:E(spl)mgamma-HLH "Enhancer of spl...   267  3.8e-23   1
FB|FBgn0002734 - symbol:E(spl)mdelta-HLH "Enhancer of spl...   228  5.1e-19   1
UNIPROTKB|Q90Z12 - symbol:hes4-a "Transcription factor HE...   206  1.0e-18   2
UNIPROTKB|E9PB28 - symbol:HES4 "Transcription factor HES-...   223  1.7e-18   1
ZFIN|ZDB-GENE-011213-1 - symbol:her9 "hairy-related 9" sp...   203  2.7e-18   2
FB|FBgn0002633 - symbol:E(spl)m7-HLH "Enhancer of split m...   220  3.6e-18   1
UNIPROTKB|Q9HCC6 - symbol:HES4 "Transcription factor HES-...   217  7.5e-18   1
UNIPROTKB|E1BP65 - symbol:HES4 "Uncharacterized protein" ...   215  1.2e-17   1
UNIPROTKB|I3LBX1 - symbol:HES4 "Uncharacterized protein" ...   215  1.2e-17   1
FB|FBgn0010109 - symbol:dpn "deadpan" species:7227 "Droso...   220  1.5e-17   1
UNIPROTKB|E2R7Q8 - symbol:HES4 "Uncharacterized protein" ...   212  2.5e-17   1
UNIPROTKB|J9NTM5 - symbol:HES4 "Uncharacterized protein" ...   212  2.5e-17   1
UNIPROTKB|J9NV17 - symbol:HES4 "Uncharacterized protein" ...   212  2.5e-17   1
FB|FBgn0001168 - symbol:h "hairy" species:7227 "Drosophil...   208  1.1e-16   1
UNIPROTKB|Q6IRB2 - symbol:hes1-a "Transcription factor HE...   205  1.4e-16   1
UNIPROTKB|Q6PBD4 - symbol:hes4 "Transcription factor HES-...   205  1.4e-16   1
UNIPROTKB|Q90VV1 - symbol:hes4-b "Transcription factor HE...   205  1.4e-16   1
UNIPROTKB|G3N2D5 - symbol:HES1 "Transcription factor HES-...   203  2.3e-16   1
UNIPROTKB|Q3ZBG4 - symbol:HES1 "Transcription factor HES-...   203  2.3e-16   1
UNIPROTKB|Q14469 - symbol:HES1 "Transcription factor HES-...   203  2.3e-16   1
UNIPROTKB|I3LM61 - symbol:HES1 "Uncharacterized protein" ...   203  2.3e-16   1
MGI|MGI:104853 - symbol:Hes1 "hairy and enhancer of split...   203  2.3e-16   1
RGD|62081 - symbol:Hes1 "hairy and enhancer of split 1 (D...   203  2.3e-16   1
UNIPROTKB|Q5PPM5 - symbol:hes1 "Transcription factor HES-...   202  2.9e-16   1
UNIPROTKB|Q8AVU4 - symbol:hes1-b "Transcription factor HE...   202  2.9e-16   1
UNIPROTKB|O57337 - symbol:HES1 "Transcription factor HES-...   200  4.7e-16   1
FB|FBgn0030899 - symbol:Her "HES-related" species:7227 "D...   196  1.3e-15   1
ZFIN|ZDB-GENE-980526-144 - symbol:her6 "hairy-related 6" ...   198  1.5e-15   1
ZFIN|ZDB-GENE-980526-204 - symbol:her3 "hairy-related 3" ...   184  2.3e-14   1
FB|FBgn0027788 - symbol:Hey "Hairy/E(spl)-related with YR...   171  3.3e-14   2
ZFIN|ZDB-GENE-030131-2376 - symbol:her8a "hairy-related 8...   163  3.9e-14   2
UNIPROTKB|E1C412 - symbol:HES6 "Uncharacterized protein" ...   174  2.7e-13   1
UNIPROTKB|F1N0L3 - symbol:HES2 "Uncharacterized protein" ...   171  5.6e-13   1
UNIPROTKB|Q9Y543 - symbol:HES2 "Transcription factor HES-...   170  7.1e-13   1
UNIPROTKB|E1C2Y3 - symbol:HES6 "Uncharacterized protein" ...   169  9.1e-13   1
ZFIN|ZDB-GENE-060815-4 - symbol:her8.2 "hairy-related 8.2...   169  9.1e-13   1
UNIPROTKB|F1RIL7 - symbol:HES2 "Uncharacterized protein" ...   166  1.9e-12   1
FB|FBgn0000591 - symbol:E(spl)m8-HLH "Enhancer of split m...   165  2.4e-12   1
UNIPROTKB|Q00P32 - symbol:hes2 "Transcription factor HES-...   163  3.9e-12   1
RGD|62082 - symbol:Hes2 "hairy and enhancer of split 2 (D...   161  6.4e-12   1
ZFIN|ZDB-GENE-030131-7074 - symbol:heyl "hairy/enhancer-o...   148  8.7e-12   2
FB|FBgn0032741 - symbol:Side "similar to Deadpan" species...   168  9.7e-12   1
UNIPROTKB|E2R0N6 - symbol:HES2 "Uncharacterized protein" ...   159  1.0e-11   1
ZFIN|ZDB-GENE-081104-104 - symbol:hes2.1 "hairy and enhan...   159  1.0e-11   1
UNIPROTKB|J9P9B3 - symbol:HEY2 "Uncharacterized protein" ...   156  2.2e-11   1
ZFIN|ZDB-GENE-060825-55 - symbol:hes2.2 "hairy and enhanc...   155  2.8e-11   1
ZFIN|ZDB-GENE-000427-6 - symbol:her7 "hairy and enhancer ...   134  3.1e-11   2
MGI|MGI:2135679 - symbol:Hes7 "hairy and enhancer of spli...   135  3.8e-11   2
RGD|1305914 - symbol:Hes7 "hairy and enhancer of split 7 ...   135  3.8e-11   2
UNIPROTKB|E2QXY9 - symbol:HES5 "Uncharacterized protein" ...   153  4.5e-11   1
UNIPROTKB|Q9BYE0 - symbol:HES7 "Transcription factor HES-...   135  4.8e-11   2
UNIPROTKB|E5RHK6 - symbol:HEY1 "Hairy/enhancer-of-split-r...   152  5.8e-11   1
UNIPROTKB|K7EJQ0 - symbol:HES2 "Transcription factor HES-...   152  5.8e-11   1
MGI|MGI:1341884 - symbol:Hey2 "hairy/enhancer-of-split re...   157  6.4e-11   1
UNIPROTKB|G3V7S6 - symbol:Hey2 "Protein Hey2" species:101...   157  6.4e-11   1
MGI|MGI:1098624 - symbol:Hes2 "hairy and enhancer of spli...   151  7.4e-11   1
RGD|1312047 - symbol:Hes6 "hairy and enhancer of split 6 ...   151  7.4e-11   1
UNIPROTKB|E1BEV8 - symbol:HEY2 "Uncharacterized protein" ...   156  8.1e-11   1
UNIPROTKB|Q9UBP5 - symbol:HEY2 "Hairy/enhancer-of-split r...   156  8.1e-11   1
UNIPROTKB|F1S2V4 - symbol:HEY2 "Uncharacterized protein" ...   156  8.1e-11   1
UNIPROTKB|Q5TF93 - symbol:HEY2 "Hairy/enhancer-of-split-r...   153  1.1e-10   1
WB|WBGene00003008 - symbol:lin-22 species:6239 "Caenorhab...   149  1.2e-10   1
UNIPROTKB|G5EF76 - symbol:lin-22 "Protein LIN-22" species...   149  1.2e-10   1
ZFIN|ZDB-GENE-040824-5 - symbol:her12 "hairy-related 12" ...   149  1.2e-10   1
ZFIN|ZDB-GENE-000526-1 - symbol:hey2 "hairy/enhancer-of-s...   154  1.2e-10   1
MGI|MGI:1341800 - symbol:Hey1 "hairy/enhancer-of-split re...   153  1.2e-10   1
UNIPROTKB|Q2KIN4 - symbol:HEY1 "Hairy/enhancer-of-split r...   152  1.7e-10   1
UNIPROTKB|G1K293 - symbol:HEY1 "Hairy/enhancer-of-split-r...   152  1.7e-10   1
UNIPROTKB|Q9TSZ2 - symbol:HEY1 "Hairy/enhancer-of-split r...   152  1.7e-10   1
UNIPROTKB|Q9Y5J3 - symbol:HEY1 "Hairy/enhancer-of-split r...   152  1.7e-10   1
UNIPROTKB|F1RWM2 - symbol:HEY1 "Uncharacterized protein" ...   152  1.7e-10   1
UNIPROTKB|Q5RCB0 - symbol:DKFZp459C0535 "Putative unchara...   152  1.7e-10   1
FB|FBgn0002631 - symbol:E(spl)m5-HLH "Enhancer of split m...   147  2.0e-10   1
UNIPROTKB|E1C6T9 - symbol:LOC100858839 "Uncharacterized p...   152  2.2e-10   1
UNIPROTKB|E1B6Z2 - symbol:E1B6Z2 "Uncharacterized protein...   146  2.5e-10   1
MGI|MGI:1860511 - symbol:Heyl "hairy/enhancer-of-split re...   151  2.7e-10   1
RGD|1305022 - symbol:Heyl "hairy/enhancer-of-split relate...   151  2.7e-10   1
UNIPROTKB|F5H3V9 - symbol:HEYL "Hairy/enhancer-of-split-r...   150  2.7e-10   1
UNIPROTKB|E2R9J1 - symbol:PABPC4 "Uncharacterized protein...   150  3.4e-10   1
UNIPROTKB|Q2NL18 - symbol:HEYL "Hairy/enhancer-of-split r...   150  3.5e-10   1
UNIPROTKB|Q9NQ87 - symbol:HEYL "Hairy/enhancer-of-split r...   150  3.5e-10   1
UNIPROTKB|I3LJW8 - symbol:HEYL "Uncharacterized protein" ...   150  3.5e-10   1
UNIPROTKB|G3X6Q3 - symbol:HEYL "Hairy/enhancer-of-split-r...   150  3.5e-10   1
UNIPROTKB|A6H787 - symbol:HES5 "HES5 protein" species:991...   144  4.1e-10   1
UNIPROTKB|Q9I8A3 - symbol:hey1 "Hairy/enhancer-of-split r...   148  4.3e-10   1
UNIPROTKB|F1NDT2 - symbol:HEY1 "Uncharacterized protein" ...   147  4.3e-10   1
UNIPROTKB|Q66KK8 - symbol:hey1 "Hairy/enhancer-of-split r...   148  4.5e-10   1
UNIPROTKB|D6REB3 - symbol:HES4 "Transcription factor HES-...   143  5.2e-10   1
UNIPROTKB|Q5TA89 - symbol:HES5 "Transcription factor HES-...   143  5.2e-10   1
UNIPROTKB|A1L3K9 - symbol:LOC100037036 "LOC100037036 prot...   141  8.4e-10   1
ZFIN|ZDB-GENE-030707-2 - symbol:her15.1 "hairy and enhanc...   141  8.4e-10   1
ZFIN|ZDB-GENE-050228-1 - symbol:her13 "hairy-related 13" ...   141  8.4e-10   1
UNIPROTKB|Q5D212 - symbol:HES5 "Uncharacterized protein" ...   140  1.1e-09   1
MGI|MGI:104876 - symbol:Hes5 "hairy and enhancer of split...   140  1.1e-09   1
RGD|621340 - symbol:Hes5 "hairy and enhancer of split 5 (...   140  1.1e-09   1
UNIPROTKB|Q96HZ4 - symbol:HES6 "Transcription cofactor HE...   140  1.1e-09   1
MGI|MGI:1859852 - symbol:Hes6 "hairy and enhancer of spli...   140  1.1e-09   1
UNIPROTKB|F1SIU5 - symbol:HES6 "Uncharacterized protein" ...   139  1.4e-09   1

WARNING:  Descriptions of 59 database sequences were not reported due to the
          limiting value of parameter V = 100.


>FB|FBgn0002609 [details] [associations]
            symbol:E(spl)m3-HLH "Enhancer of split m3, helix-loop-helix"
            species:7227 "Drosophila melanogaster" [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=NAS;TAS] [GO:0005634 "nucleus" evidence=NAS] [GO:0043565
            "sequence-specific DNA binding" evidence=IDA] [GO:0048749 "compound
            eye development" evidence=TAS] [GO:0003677 "DNA binding"
            evidence=NAS] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=NAS] [GO:0007219 "Notch
            signaling pathway" evidence=NAS] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
            dimerization activity" evidence=IEA] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 PROSITE:PS51054
            SMART:SM00353 EMBL:AE014297 GO:GO:0005634 GO:GO:0007399
            GO:GO:0030154 GO:GO:0043565 GO:GO:0007219 GO:GO:0003700
            GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048749
            InterPro:IPR018352 SMART:SM00511 GeneTree:ENSGT00700000104130
            KO:K09090 EMBL:AY779906 EMBL:AY779907 EMBL:AY779908 EMBL:AY779909
            EMBL:AY779910 EMBL:AY779911 EMBL:AY779912 EMBL:AY779913
            EMBL:AY779914 EMBL:AY779915 EMBL:AY779916 EMBL:AY779917
            EMBL:AY779918 EMBL:AY779919 EMBL:AY779920 EMBL:AY779921 EMBL:M96165
            EMBL:X67046 EMBL:AY094858 PIR:D46177 RefSeq:NP_524509.2
            UniGene:Dm.4542 ProteinModelPortal:Q01068 SMR:Q01068 DIP:DIP-356N
            IntAct:Q01068 MINT:MINT-314506 STRING:Q01068 PRIDE:Q01068
            EnsemblMetazoa:FBtr0084958 GeneID:43156 KEGG:dme:Dmel_CG8346
            CTD:43156 FlyBase:FBgn0002609 eggNOG:NOG264490 InParanoid:Q5S455
            OMA:GASEPVW OrthoDB:EOG47M0F3 PhylomeDB:Q01068 GenomeRNAi:43156
            NextBio:832457 Bgee:Q01068 GermOnline:CG8346 Uniprot:Q01068
        Length = 224

 Score = 253 (94.1 bits), Expect = 3.9e-24, Sum P(2) = 3.9e-24
 Identities = 53/108 (49%), Positives = 76/108 (70%)

Query:    10 YPEVMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRR 69
             Y +VMKP+LERKRRARIN+CLD+LK++MV  LQ EGE+V++LEKADILELTV H+ KL++
Sbjct:    11 YRKVMKPLLERKRRARINKCLDDLKDLMVECLQQEGEHVTRLEKADILELTVDHMRKLKQ 70

Query:    70 QQSLGL--------TP----EAAYADRFKAGFTHCAAEVSQYLASSMQ 105
             +  L L        +P      A+ + F++G+ H A +++Q L  + Q
Sbjct:    71 RGGLSLQGVVAGVGSPPTSTSTAHVESFRSGYVHAADQITQVLLQTQQ 118

 Score = 38 (18.4 bits), Expect = 3.9e-24, Sum P(2) = 3.9e-24
 Identities = 9/18 (50%), Positives = 10/18 (55%)

Query:   105 QQHQQQPSTEPTIDPSSG 122
             QQ QQQ   +  I  SSG
Sbjct:   144 QQQQQQQHQQQQIPQSSG 161


>FB|FBgn0002733 [details] [associations]
            symbol:E(spl)mbeta-HLH "Enhancer of split mbeta,
            helix-loop-helix" species:7227 "Drosophila melanogaster"
            [GO:0003677 "DNA binding" evidence=ISS;NAS] [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEP;ISS] [GO:0005634 "nucleus" evidence=IC;NAS]
            [GO:0043565 "sequence-specific DNA binding" evidence=IDA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=TAS] [GO:0048749 "compound eye development"
            evidence=TAS] [GO:0007399 "nervous system development"
            evidence=NAS] [GO:0007219 "Notch signaling pathway" evidence=NAS]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=NAS] [GO:0046983 "protein dimerization activity"
            evidence=IEA] InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010
            Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353
            EMBL:AE014297 GO:GO:0005634 GO:GO:0007399 GO:GO:0030154
            GO:GO:0043565 GO:GO:0007219 GO:GO:0003700 GO:GO:0006351
            GO:GO:0000122 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048749
            InterPro:IPR018352 SMART:SM00511 GeneTree:ENSGT00700000104130
            KO:K09090 EMBL:AY779906 EMBL:AY779907 EMBL:AY779908 EMBL:AY779909
            EMBL:AY779910 EMBL:AY779911 EMBL:AY779912 EMBL:AY779913
            EMBL:AY779914 EMBL:AY779915 EMBL:AY779916 EMBL:AY779917
            EMBL:AY779918 EMBL:AY779919 EMBL:AY779920 EMBL:AY779921 EMBL:M96166
            EMBL:X67047 EMBL:AY118723 PIR:C46177 RefSeq:NP_524505.2
            UniGene:Dm.4538 ProteinModelPortal:Q01069 SMR:Q01069 DIP:DIP-721N
            IntAct:Q01069 MINT:MINT-899518 STRING:Q01069 PRIDE:Q01069
            EnsemblMetazoa:FBtr0084982 GeneID:43152 KEGG:dme:Dmel_CG14548
            CTD:43152 FlyBase:FBgn0002733 eggNOG:NOG303202 InParanoid:Q01069
            OMA:STSGPMW OrthoDB:EOG4J3V0B PhylomeDB:Q01069 ChiTaRS:HLHmbeta
            GenomeRNAi:43152 NextBio:832437 Bgee:Q01069 GermOnline:CG14548
            Uniprot:Q01069
        Length = 195

 Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
 Identities = 60/104 (57%), Positives = 77/104 (74%)

Query:    10 YPEVMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRR 69
             Y +VMKPMLERKRRARIN+CLDELK+IMV  L  EGE++++LEKADILELTV H+ KLR 
Sbjct:    13 YRKVMKPMLERKRRARINKCLDELKDIMVECLTQEGEHITRLEKADILELTVEHMKKLRA 72

Query:    70 QQSL-------GLTPEA----AYADRFKAGFTHCAAEVSQYLAS 102
             Q+ L       G++P A    + A+ F+AG+ H A EVS+ LA+
Sbjct:    73 QKQLRLSSVTGGVSPSADPKLSIAESFRAGYVHAANEVSKTLAA 116


>FB|FBgn0002735 [details] [associations]
            symbol:E(spl)mgamma-HLH "Enhancer of split mgamma,
            helix-loop-helix" species:7227 "Drosophila melanogaster"
            [GO:0005634 "nucleus" evidence=IC;NAS] [GO:0003677 "DNA binding"
            evidence=ISS;NAS] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=ISS;IMP;IDA;TAS]
            [GO:0043565 "sequence-specific DNA binding" evidence=IDA]
            [GO:0048749 "compound eye development" evidence=TAS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=TAS] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=NAS] [GO:0007399 "nervous system
            development" evidence=NAS] [GO:0007219 "Notch signaling pathway"
            evidence=NAS] [GO:0008134 "transcription factor binding"
            evidence=IGI] [GO:0046983 "protein dimerization activity"
            evidence=IEA] [GO:0048190 "wing disc dorsal/ventral pattern
            formation" evidence=IGI] [GO:0002052 "positive regulation of
            neuroblast proliferation" evidence=IMP] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 EMBL:AE014297 GO:GO:0005634
            GO:GO:0048190 GO:GO:0043565 GO:GO:0007219 GO:GO:0003700
            GO:GO:0006351 GO:GO:0000122 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GO:GO:0008134 GO:GO:0048749 GO:GO:0002052 InterPro:IPR018352
            SMART:SM00511 GeneTree:ENSGT00700000104130 KO:K09090 EMBL:AY779906
            EMBL:AY779907 EMBL:AY779908 EMBL:AY779909 EMBL:AY779910
            EMBL:AY779911 EMBL:AY779912 EMBL:AY779913 EMBL:AY779914
            EMBL:AY779915 EMBL:AY779916 EMBL:AY779917 EMBL:AY779918
            EMBL:AY779919 EMBL:AY779920 EMBL:AY779921 OrthoDB:EOG4J3V0B
            EMBL:X67049 EMBL:M96167 EMBL:AJ276315 EMBL:BT022125 PIR:B46177
            RefSeq:NP_524504.2 UniGene:Dm.1339 ProteinModelPortal:Q01070
            SMR:Q01070 DIP:DIP-723N IntAct:Q01070 STRING:Q01070 PRIDE:Q01070
            EnsemblMetazoa:FBtr0084955 GeneID:43151 KEGG:dme:Dmel_CG8333
            CTD:43151 FlyBase:FBgn0002735 eggNOG:NOG256051 InParanoid:Q01070
            OMA:ESEGEHV PhylomeDB:Q01070 GenomeRNAi:43151 NextBio:832432
            Bgee:Q01070 GermOnline:CG8333 Uniprot:Q01070
        Length = 205

 Score = 267 (99.0 bits), Expect = 3.8e-23, P = 3.8e-23
 Identities = 57/104 (54%), Positives = 77/104 (74%)

Query:     1 MSTLSIEVVYPEVMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELT 60
             MS +S    Y +VMKPMLERKRRARIN+CLDELK++MV +L++EGE+V++LEKADILELT
Sbjct:     6 MSEMSKTYQYRKVMKPMLERKRRARINKCLDELKDLMVATLESEGEHVTRLEKADILELT 65

Query:    61 VRHLHKLR--RQQSLGLTPEAAY-ADRFKAGFTHCAAEVSQYLA 101
             V HL K++  RQ       E+   A+ F++G+ H   EVS+ L+
Sbjct:    66 VTHLQKMKQQRQHKRASGDESLTPAEGFRSGYIHAVNEVSRSLS 109


>FB|FBgn0002734 [details] [associations]
            symbol:E(spl)mdelta-HLH "Enhancer of split mdelta,
            helix-loop-helix" species:7227 "Drosophila melanogaster"
            [GO:0003677 "DNA binding" evidence=ISS;NAS] [GO:0005634 "nucleus"
            evidence=IC;NAS] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=ISS;IDA;IMP] [GO:0043565
            "sequence-specific DNA binding" evidence=IDA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=TAS] [GO:0048749 "compound eye development" evidence=TAS]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=NAS] [GO:0007219 "Notch signaling pathway" evidence=NAS]
            [GO:0007399 "nervous system development" evidence=NAS] [GO:0046983
            "protein dimerization activity" evidence=IEA] [GO:0045466 "R7 cell
            differentiation" evidence=IMP] [GO:0048052 "R1/R6 cell
            differentiation" evidence=IMP] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 EMBL:AE014297 GO:GO:0005634
            GO:GO:0043565 GO:GO:0007219 GO:GO:0003700 GO:GO:0006351
            GO:GO:0000122 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR018352
            SMART:SM00511 GeneTree:ENSGT00700000104130 KO:K09090 GO:GO:0045466
            EMBL:AY779906 EMBL:AY779907 EMBL:AY779908 EMBL:AY779909
            EMBL:AY779910 EMBL:AY779911 EMBL:AY779912 EMBL:AY779913
            EMBL:AY779914 EMBL:AY779915 EMBL:AY779916 EMBL:AY779917
            EMBL:AY779918 EMBL:AY779919 EMBL:AY779920 EMBL:AY779921 EMBL:X67048
            EMBL:M96168 EMBL:BT022133 EMBL:AY905719 EMBL:AY905720 EMBL:AY905721
            EMBL:AY905722 EMBL:AY905723 EMBL:AY905724 EMBL:AY905725
            EMBL:AY905726 EMBL:AY905727 EMBL:AY905728 EMBL:AY905729
            EMBL:AY905730 EMBL:AY905731 EMBL:AY905732 EMBL:AY905733
            EMBL:AY905734 EMBL:AY905735 EMBL:AY905736 EMBL:AY905737
            EMBL:AY905738 EMBL:AY905739 EMBL:AY905740 EMBL:AY905741
            EMBL:AY905742 EMBL:AY905743 EMBL:AY905744 EMBL:AY905745
            EMBL:AY905746 EMBL:AY905747 EMBL:AY905748 EMBL:AY905749
            EMBL:AY905750 EMBL:AY905751 EMBL:AY905752 EMBL:AY905753
            EMBL:AY905754 EMBL:AY905755 EMBL:AY905756 EMBL:AY905757
            EMBL:AY905758 EMBL:AY905759 EMBL:AY905760 EMBL:AY905761
            EMBL:AY905762 EMBL:AY905763 EMBL:AY905764 EMBL:AY905765
            EMBL:AY905766 EMBL:AY905767 EMBL:AY905768 EMBL:AY905769
            EMBL:AY905770 EMBL:AY905771 EMBL:AY905772 EMBL:AY905773
            EMBL:AY905774 EMBL:AY905775 EMBL:AY905776 EMBL:AY905777
            EMBL:AY905778 EMBL:AY905779 EMBL:AY905780 EMBL:AY905781
            EMBL:AY905782 EMBL:AY905783 EMBL:AY905784 EMBL:AY905785
            EMBL:AY905786 EMBL:AY905787 EMBL:AY905788 EMBL:AY905789
            EMBL:AY905790 EMBL:AY905791 EMBL:AY905792 EMBL:AY905793
            EMBL:AY905794 EMBL:AY905795 EMBL:AY905796 EMBL:AY905797
            EMBL:AY905798 EMBL:AY905799 EMBL:AY905800 EMBL:AY905801
            EMBL:AY905802 EMBL:AY905803 EMBL:AY905804 EMBL:AY905805
            EMBL:AY905806 EMBL:AY905807 EMBL:AY905808 EMBL:AY905809
            EMBL:AY905810 EMBL:AY905811 PIR:A46177 RefSeq:NP_524503.2
            UniGene:Dm.2355 ProteinModelPortal:Q01071 SMR:Q01071 DIP:DIP-722N
            IntAct:Q01071 MINT:MINT-288607 STRING:Q01071 PRIDE:Q01071
            EnsemblMetazoa:FBtr0084954 GeneID:43150 KEGG:dme:Dmel_CG8328
            CTD:43150 FlyBase:FBgn0002734 eggNOG:NOG253790 InParanoid:Q01071
            OMA:YEVSHIF OrthoDB:EOG4VQ85K PhylomeDB:Q01071 GenomeRNAi:43150
            NextBio:832427 Bgee:Q01071 GermOnline:CG8328 GO:GO:0048052
            Uniprot:Q01071
        Length = 173

 Score = 228 (85.3 bits), Expect = 5.1e-19, P = 5.1e-19
 Identities = 50/97 (51%), Positives = 69/97 (71%)

Query:    10 YPEVMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRR 69
             Y +V KP+LERKRRAR+N  LDELK+++V ++ A+GE VSKLEKADILELTV +L K ++
Sbjct:    15 YRKVTKPLLERKRRARMNLYLDELKDLIVDTMDAQGEQVSKLEKADILELTVNYL-KAQQ 73

Query:    70 QQSLGLT----PEAAYADRFKAGFTHCAAEVSQYLAS 102
             QQ +       P+    D+F+AG+T  A EVS   ++
Sbjct:    74 QQRVANPQSPPPDQVNLDKFRAGYTQAAYEVSHIFST 110


>UNIPROTKB|Q90Z12 [details] [associations]
            symbol:hes4-a "Transcription factor HES-4-A" species:8355
            "Xenopus laevis" [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IMP] [GO:0002088 "lens
            development in camera-type eye" evidence=IMP] [GO:0005634 "nucleus"
            evidence=ISS] [GO:0008283 "cell proliferation" evidence=IMP]
            [GO:0014029 "neural crest formation" evidence=IMP] [GO:0021501
            "prechordal plate formation" evidence=IMP] [GO:0030509 "BMP
            signaling pathway" evidence=IMP] [GO:0033504 "floor plate
            development" evidence=IMP] [GO:0043066 "negative regulation of
            apoptotic process" evidence=IMP] [GO:0043425 "bHLH transcription
            factor binding" evidence=IPI] [GO:0043565 "sequence-specific DNA
            binding" evidence=IDA] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=IMP] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 GO:GO:0005634 GO:GO:0043066
            GO:GO:0008283 GO:GO:0043565 GO:GO:0006351 GO:GO:0000122
            GO:GO:0030509 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR018352
            SMART:SM00511 GO:GO:0002088 GO:GO:0033504 GO:GO:0021501
            GO:GO:0014029 KO:K06054 EMBL:AF383159 EMBL:AF139914 EMBL:BC071075
            EMBL:AF022798 RefSeq:NP_001082574.1 UniGene:Xl.25977 GeneID:398579
            KEGG:xla:398579 CTD:398579 Xenbase:XB-GENE-6256031 Uniprot:Q90Z12
        Length = 281

 Score = 206 (77.6 bits), Expect = 1.0e-18, Sum P(2) = 1.0e-18
 Identities = 39/89 (43%), Positives = 64/89 (71%)

Query:    15 KPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRR-QQSL 73
             KP++E++RRARIN  L +LK +++ +L+ +    SKLEKADILE+TV+HL  L+R Q + 
Sbjct:    39 KPIMEKRRRARINESLGQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQRVQMTA 98

Query:    74 GLTPEAAYADRFKAGFTHCAAEVSQYLAS 102
              LT + +   +++AGF  C  EV+++L++
Sbjct:    99 ALTSDPSVLGKYRAGFNECTNEVTRFLST 127

 Score = 33 (16.7 bits), Expect = 1.0e-18, Sum P(2) = 1.0e-18
 Identities = 10/21 (47%), Positives = 11/21 (52%)

Query:   102 SSMQQ-HQQQPSTEPTIDPSS 121
             SS Q  H Q PS+ P   P S
Sbjct:   160 SSQQPLHVQLPSSTPAPMPIS 180


>UNIPROTKB|E9PB28 [details] [associations]
            symbol:HES4 "Transcription factor HES-4" species:9606 "Homo
            sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
            "protein dimerization activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] InterPro:IPR003650 InterPro:IPR011598
            Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054
            SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
            GO:GO:0006351 EMBL:AL645608 Gene3D:4.10.280.10 SUPFAM:SSF47459
            InterPro:IPR018352 SMART:SM00511 RefSeq:NP_001135939.1
            UniGene:Hs.154029 DNASU:57801 GeneID:57801 KEGG:hsa:57801 CTD:57801
            HGNC:HGNC:24149 KO:K09089 GenomeRNAi:57801 NextBio:64747
            IPI:IPI00917954 ProteinModelPortal:E9PB28 SMR:E9PB28
            Ensembl:ENST00000428771 UCSC:uc010nyc.1 OMA:GPWRPWL
            ArrayExpress:E9PB28 Bgee:E9PB28 Uniprot:E9PB28
        Length = 247

 Score = 223 (83.6 bits), Expect = 1.7e-18, P = 1.7e-18
 Identities = 45/92 (48%), Positives = 66/92 (71%)

Query:    11 PEVMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRRQ 70
             P+  KP++E++RRARIN  L +LK +++ +L+ E    SKLEKADILE+TVRHL  LRR 
Sbjct:    61 PQSSKPVMEKRRRARINESLAQLKTLILDALRKESSRHSKLEKADILEMTVRHLRSLRRV 120

Query:    71 Q-SLGLTPEAAYADRFKAGFTHCAAEVSQYLA 101
             Q +  L+ + A   +++AGF  C AEV+++LA
Sbjct:   121 QVTAALSADPAVLGKYRAGFHECLAEVNRFLA 152


>ZFIN|ZDB-GENE-011213-1 [details] [associations]
            symbol:her9 "hairy-related 9" species:7955 "Danio
            rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0046983 "protein dimerization activity" evidence=IEA]
            [GO:0050768 "negative regulation of neurogenesis" evidence=IMP]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] InterPro:IPR003650 InterPro:IPR011598
            Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054
            SMART:SM00353 ZFIN:ZDB-GENE-011213-1 GO:GO:0005634 GO:GO:0006355
            GO:GO:0003677 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GO:GO:0050768 InterPro:IPR018352 SMART:SM00511
            GeneTree:ENSGT00700000104168 KO:K06054 HOVERGEN:HBG005960
            OMA:HTPDKPK EMBL:CR751236 EMBL:AF301264 EMBL:BC079516
            IPI:IPI00506831 RefSeq:NP_571948.1 UniGene:Dr.78757 STRING:Q9DF41
            Ensembl:ENSDART00000078936 GeneID:140613 KEGG:dre:140613 CTD:140613
            InParanoid:Q9DF41 NextBio:20797024 Uniprot:Q9DF41
        Length = 291

 Score = 203 (76.5 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
 Identities = 39/89 (43%), Positives = 63/89 (70%)

Query:    15 KPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRR-QQSL 73
             KP++E++RRARIN  L +LK +++ +L+ +    SKLEKADILE+TV+HL  L+R Q S 
Sbjct:    39 KPIMEKRRRARINESLGQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQRVQMSA 98

Query:    74 GLTPEAAYADRFKAGFTHCAAEVSQYLAS 102
              L+ +     +++AGF  C  EV+++L++
Sbjct:    99 ALSADTNVLSKYRAGFNECMNEVTRFLST 127

 Score = 32 (16.3 bits), Expect = 2.7e-18, Sum P(2) = 2.7e-18
 Identities = 8/16 (50%), Positives = 8/16 (50%)

Query:   107 HQQQPSTEPTIDPSSG 122
             H Q PST P    S G
Sbjct:   171 HVQLPSTLPINGASMG 186


>FB|FBgn0002633 [details] [associations]
            symbol:E(spl)m7-HLH "Enhancer of split m7, helix-loop-helix"
            species:7227 "Drosophila melanogaster" [GO:0001078 "RNA polymerase
            II core promoter proximal region sequence-specific DNA binding
            transcription factor activity involved in negative regulation of
            transcription" evidence=IDA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IMP;IDA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IDA]
            [GO:0008134 "transcription factor binding" evidence=IGI;IPI]
            [GO:0006357 "regulation of transcription from RNA polymerase II
            promoter" evidence=NAS] [GO:0005634 "nucleus" evidence=NAS]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=NAS;TAS] [GO:0048749 "compound eye development"
            evidence=TAS] [GO:0046983 "protein dimerization activity"
            evidence=IEA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
            [GO:0048666 "neuron development" evidence=IMP] [GO:0048854 "brain
            morphogenesis" evidence=IMP] [GO:0001964 "startle response"
            evidence=IMP] [GO:0031987 "locomotion involved in locomotory
            behavior" evidence=IMP] [GO:2001020 "regulation of response to DNA
            damage stimulus" evidence=IGI] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 EMBL:AE014297 GO:GO:0005634
            GO:GO:0001078 GO:GO:0043565 GO:GO:0048813 Gene3D:4.10.280.10
            SUPFAM:SSF47459 GO:GO:0008134 GO:GO:0048749 GO:GO:0048854
            InterPro:IPR018352 SMART:SM00511 GO:GO:0031987 GO:GO:0001964
            GeneTree:ENSGT00700000104130 KO:K09090 EMBL:AY779906 EMBL:AY779907
            EMBL:AY779908 EMBL:AY779909 EMBL:AY779910 EMBL:AY779911
            EMBL:AY779912 EMBL:AY779913 EMBL:AY779914 EMBL:AY779915
            EMBL:AY779916 EMBL:AY779917 EMBL:AY779918 EMBL:AY779919
            EMBL:AY779920 EMBL:AY779921 EMBL:X16553 EMBL:BT022121 PIR:S03626
            RefSeq:NP_536753.1 UniGene:Dm.24100 ProteinModelPortal:P13097
            SMR:P13097 DIP:DIP-626N IntAct:P13097 MINT:MINT-188653
            STRING:P13097 PRIDE:P13097 EnsemblMetazoa:FBtr0084960 GeneID:43160
            KEGG:dme:Dmel_CG8361 CTD:43160 FlyBase:FBgn0002633 eggNOG:NOG241578
            InParanoid:P13097 OMA:FRAGYIR OrthoDB:EOG4BG7C7 PhylomeDB:P13097
            GenomeRNAi:43160 NextBio:832477 Bgee:P13097 GermOnline:CG8361
            Uniprot:P13097
        Length = 186

 Score = 220 (82.5 bits), Expect = 3.6e-18, P = 3.6e-18
 Identities = 49/94 (52%), Positives = 66/94 (70%)

Query:    10 YPEVMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRR 69
             Y +VMKP+LERKRRARIN+CLDELK++M   +   G+  +K EKADILE+TV+HL KL+ 
Sbjct:    13 YRKVMKPLLERKRRARINKCLDELKDLMAECVAQTGD--AKFEKADILEVTVQHLRKLKE 70

Query:    70 QQS-LGLTPEAAYADRFKAGFTHCAAEVSQYLAS 102
              +  +   PE +    F+AG+   A EVS+ LAS
Sbjct:    71 SKKHVPANPEQS----FRAGYIRAANEVSRALAS 100


>UNIPROTKB|Q9HCC6 [details] [associations]
            symbol:HES4 "Transcription factor HES-4" species:9606 "Homo
            sapiens" [GO:0046983 "protein dimerization activity" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0007399 "nervous
            system development" evidence=IEA] [GO:0030154 "cell
            differentiation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0008134 "transcription factor binding" evidence=NAS]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 GO:GO:0005634
            GO:GO:0007399 GO:GO:0030154 GO:GO:0006355 GO:GO:0003677
            GO:GO:0006351 EMBL:AL645608 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GO:GO:0008134 InterPro:IPR018352 SMART:SM00511 eggNOG:NOG319418
            HOGENOM:HOG000236346 HOVERGEN:HBG005960 EMBL:AB048791 EMBL:BC012351
            IPI:IPI00028151 RefSeq:NP_001135939.1 RefSeq:NP_066993.1
            UniGene:Hs.154029 ProteinModelPortal:Q9HCC6 SMR:Q9HCC6
            IntAct:Q9HCC6 STRING:Q9HCC6 PhosphoSite:Q9HCC6 DMDM:34098717
            UCD-2DPAGE:Q9HCC6 PRIDE:Q9HCC6 DNASU:57801 Ensembl:ENST00000304952
            GeneID:57801 KEGG:hsa:57801 UCSC:uc001aci.2 CTD:57801
            GeneCards:GC01M000924 HGNC:HGNC:24149 MIM:608060 neXtProt:NX_Q9HCC6
            PharmGKB:PA134975318 InParanoid:Q9HCC6 KO:K09089 PhylomeDB:Q9HCC6
            GenomeRNAi:57801 NextBio:64747 ArrayExpress:Q9HCC6 Bgee:Q9HCC6
            CleanEx:HS_HES4 Genevestigator:Q9HCC6 GermOnline:ENSG00000188290
            Uniprot:Q9HCC6
        Length = 221

 Score = 217 (81.4 bits), Expect = 7.5e-18, P = 7.5e-18
 Identities = 44/88 (50%), Positives = 64/88 (72%)

Query:    15 KPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRRQQ-SL 73
             KP++E++RRARIN  L +LK +++ +L+ E    SKLEKADILE+TVRHL  LRR Q + 
Sbjct:    39 KPVMEKRRRARINESLAQLKTLILDALRKESSRHSKLEKADILEMTVRHLRSLRRVQVTA 98

Query:    74 GLTPEAAYADRFKAGFTHCAAEVSQYLA 101
              L+ + A   +++AGF  C AEV+++LA
Sbjct:    99 ALSADPAVLGKYRAGFHECLAEVNRFLA 126


>UNIPROTKB|E1BP65 [details] [associations]
            symbol:HES4 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0046983
            "protein dimerization activity" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] InterPro:IPR003650 InterPro:IPR011598
            Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054
            SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
            GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR018352
            SMART:SM00511 GeneTree:ENSGT00700000104168 CTD:57801 KO:K09089
            OMA:GPWRPWL EMBL:DAAA02043249 IPI:IPI00694948 RefSeq:XP_002694182.1
            RefSeq:XP_584091.2 Ensembl:ENSBTAT00000019571 GeneID:507480
            KEGG:bta:507480 NextBio:20868081 Uniprot:E1BP65
        Length = 222

 Score = 215 (80.7 bits), Expect = 1.2e-17, P = 1.2e-17
 Identities = 44/88 (50%), Positives = 63/88 (71%)

Query:    15 KPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRRQQ-SL 73
             KP++E++RRARIN  L +L+ +++ +L+ E    SKLEKADILELTVRHL  LRR Q + 
Sbjct:    39 KPVMEKRRRARINESLAQLQSLLLDALRKESSRRSKLEKADILELTVRHLQSLRRVQVTA 98

Query:    74 GLTPEAAYADRFKAGFTHCAAEVSQYLA 101
              L  + A   +++AGF  C AEV+++LA
Sbjct:    99 ALRSDPAILGKYRAGFHECLAEVNRFLA 126


>UNIPROTKB|I3LBX1 [details] [associations]
            symbol:HES4 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0046983
            "protein dimerization activity" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] InterPro:IPR003650 InterPro:IPR011598
            Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054
            SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
            GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR018352
            SMART:SM00511 GeneTree:ENSGT00700000104168 KO:K09089 OMA:GPWRPWL
            EMBL:FP565685 RefSeq:XP_003481977.1 Ensembl:ENSSSCT00000024059
            GeneID:100739264 KEGG:ssc:100739264 Uniprot:I3LBX1
        Length = 228

 Score = 215 (80.7 bits), Expect = 1.2e-17, P = 1.2e-17
 Identities = 43/87 (49%), Positives = 63/87 (72%)

Query:    15 KPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRRQQ-SL 73
             KP++E++RRARIN  L +LK +++ +L+ E    SKLEKADILE+TVRHL  LRR Q + 
Sbjct:    39 KPVMEKRRRARINESLAQLKTLILDALRKESSRHSKLEKADILEMTVRHLQSLRRVQVTA 98

Query:    74 GLTPEAAYADRFKAGFTHCAAEVSQYL 100
              L+ + A   +++AGF  C AEV+++L
Sbjct:    99 ALSADPAVLGKYRAGFNECLAEVNRFL 125


>FB|FBgn0010109 [details] [associations]
            symbol:dpn "deadpan" species:7227 "Drosophila melanogaster"
            [GO:0008345 "larval locomotory behavior" evidence=IMP] [GO:0007549
            "dosage compensation" evidence=IMP] [GO:0008344 "adult locomotory
            behavior" evidence=IMP] [GO:0007540 "sex determination,
            establishment of X:A ratio" evidence=IGI;NAS;IMP] [GO:0005634
            "nucleus" evidence=IC;IDA] [GO:0001078 "RNA polymerase II core
            promoter proximal region sequence-specific DNA binding
            transcription factor activity involved in negative regulation of
            transcription" evidence=IDA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=ISS;IDA]
            [GO:0003677 "DNA binding" evidence=ISS] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=NAS]
            [GO:0007530 "sex determination" evidence=NAS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=NAS] [GO:0046983 "protein dimerization activity"
            evidence=IEA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
            [GO:0007219 "Notch signaling pathway" evidence=IGI] [GO:0002052
            "positive regulation of neuroblast proliferation" evidence=IMP]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 EMBL:AE013599
            GO:GO:0005634 GO:GO:0003677 GO:GO:0001078 GO:GO:0008344
            GO:GO:0007219 GO:GO:0048813 GO:GO:0008345 Gene3D:4.10.280.10
            SUPFAM:SSF47459 GO:GO:0002052 GO:GO:0007540 InterPro:IPR018352
            SMART:SM00511 EMBL:S48025 EMBL:AY071330 RefSeq:NP_476923.1
            UniGene:Dm.525 ProteinModelPortal:Q26263 SMR:Q26263 DIP:DIP-19436N
            IntAct:Q26263 MINT:MINT-314570 STRING:Q26263
            EnsemblMetazoa:FBtr0088803 GeneID:35800 KEGG:dme:Dmel_CG8704
            UCSC:CG8704-RA CTD:35800 FlyBase:FBgn0010109 eggNOG:NOG319418
            GeneTree:ENSGT00700000104130 InParanoid:Q26263 KO:K09090
            OMA:CAEEVNR OrthoDB:EOG4M37RH PhylomeDB:Q26263 GenomeRNAi:35800
            NextBio:795271 Bgee:Q26263 GermOnline:CG8704 GO:GO:0007549
            Uniprot:Q26263
        Length = 435

 Score = 220 (82.5 bits), Expect = 1.5e-17, P = 1.5e-17
 Identities = 39/88 (44%), Positives = 66/88 (75%)

Query:    15 KPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRRQQ-SL 73
             KP++E++RRARIN CL+ELK +++ +++ +    +KLEKADILE+TV+HL  ++RQQ ++
Sbjct:    45 KPIMEKRRRARINHCLNELKSLILEAMKKDPARHTKLEKADILEMTVKHLQSVQRQQLNM 104

Query:    74 GLTPEAAYADRFKAGFTHCAAEVSQYLA 101
              +  + +   +FK GF  CA EV++Y++
Sbjct:   105 AIQSDPSVVQKFKTGFVECAEEVNRYVS 132


>UNIPROTKB|E2R7Q8 [details] [associations]
            symbol:HES4 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0046983 "protein dimerization activity" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 GO:GO:0005634 GO:GO:0006355
            GO:GO:0003677 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
            InterPro:IPR018352 SMART:SM00511 GeneTree:ENSGT00700000104168
            CTD:57801 KO:K09089 EMBL:AAEX03003836 EMBL:AAEX03003832
            EMBL:AAEX03003833 EMBL:AAEX03003834 EMBL:AAEX03003835
            RefSeq:XP_546724.1 Ensembl:ENSCAFT00000030751 GeneID:489604
            KEGG:cfa:489604 Uniprot:E2R7Q8
        Length = 225

 Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
 Identities = 42/88 (47%), Positives = 63/88 (71%)

Query:    15 KPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRRQQ-SL 73
             KP++E++RRARIN  L +LK +++ + + +    SKLEKADILE+TVRHL  LRR Q + 
Sbjct:    39 KPVMEKRRRARINESLAQLKTLILDAFRKDSSRHSKLEKADILEMTVRHLQSLRRVQVTA 98

Query:    74 GLTPEAAYADRFKAGFTHCAAEVSQYLA 101
              L+ + A   +++AGF  C AEV+++LA
Sbjct:    99 ALSADPAVLGKYRAGFNECLAEVNRFLA 126


>UNIPROTKB|J9NTM5 [details] [associations]
            symbol:HES4 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0046983 "protein dimerization activity" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 GO:GO:0005634 GO:GO:0006355
            GO:GO:0003677 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
            InterPro:IPR018352 SMART:SM00511 GeneTree:ENSGT00700000104168
            EMBL:AAEX03003836 EMBL:AAEX03003832 EMBL:AAEX03003833
            EMBL:AAEX03003834 EMBL:AAEX03003835 Ensembl:ENSCAFT00000049600
            Uniprot:J9NTM5
        Length = 214

 Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
 Identities = 42/88 (47%), Positives = 63/88 (71%)

Query:    15 KPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRRQQ-SL 73
             KP++E++RRARIN  L +LK +++ + + +    SKLEKADILE+TVRHL  LRR Q + 
Sbjct:    39 KPVMEKRRRARINESLAQLKTLILDAFRKDSSRHSKLEKADILEMTVRHLQSLRRVQVTA 98

Query:    74 GLTPEAAYADRFKAGFTHCAAEVSQYLA 101
              L+ + A   +++AGF  C AEV+++LA
Sbjct:    99 ALSADPAVLGKYRAGFNECLAEVNRFLA 126


>UNIPROTKB|J9NV17 [details] [associations]
            symbol:HES4 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0046983 "protein dimerization activity" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 GO:GO:0005634 GO:GO:0006355
            GO:GO:0003677 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
            InterPro:IPR018352 SMART:SM00511 GeneTree:ENSGT00700000104168
            EMBL:AAEX03003836 EMBL:AAEX03003832 EMBL:AAEX03003833
            EMBL:AAEX03003834 EMBL:AAEX03003835 Ensembl:ENSCAFT00000043997
            OMA:GHLATCL Uniprot:J9NV17
        Length = 157

 Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
 Identities = 42/88 (47%), Positives = 63/88 (71%)

Query:    15 KPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRRQQ-SL 73
             KP++E++RRARIN  L +LK +++ + + +    SKLEKADILE+TVRHL  LRR Q + 
Sbjct:     4 KPVMEKRRRARINESLAQLKTLILDAFRKDSSRHSKLEKADILEMTVRHLQSLRRVQVTA 63

Query:    74 GLTPEAAYADRFKAGFTHCAAEVSQYLA 101
              L+ + A   +++AGF  C AEV+++LA
Sbjct:    64 ALSADPAVLGKYRAGFNECLAEVNRFLA 91


>FB|FBgn0001168 [details] [associations]
            symbol:h "hairy" species:7227 "Drosophila melanogaster"
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=IDA;TAS] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=NAS;IMP;IDA;TAS;IPI]
            [GO:0070888 "E-box binding" evidence=IDA] [GO:0000978 "RNA
            polymerase II core promoter proximal region sequence-specific DNA
            binding" evidence=IDA] [GO:0001078 "RNA polymerase II core promoter
            proximal region sequence-specific DNA binding transcription factor
            activity involved in negative regulation of transcription"
            evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0005515
            "protein binding" evidence=IPI] [GO:0008134 "transcription factor
            binding" evidence=IPI] [GO:0005634 "nucleus" evidence=NAS]
            [GO:0008407 "chaeta morphogenesis" evidence=NAS] [GO:0007366
            "periodic partitioning by pair rule gene" evidence=NAS;TAS]
            [GO:0007460 "R8 cell fate commitment" evidence=NAS] [GO:0007435
            "salivary gland morphogenesis" evidence=IGI;IMP;TAS] [GO:0000902
            "cell morphogenesis" evidence=IMP] [GO:0035239 "tube morphogenesis"
            evidence=IMP] [GO:0007431 "salivary gland development"
            evidence=TAS] [GO:0016044 "cellular membrane organization"
            evidence=TAS] [GO:0007399 "nervous system development"
            evidence=TAS] [GO:0046983 "protein dimerization activity"
            evidence=IEA] [GO:0035289 "posterior head segmentation"
            evidence=TAS] [GO:0035290 "trunk segmentation" evidence=TAS]
            [GO:0007424 "open tracheal system development" evidence=IMP]
            [GO:0031323 "regulation of cellular metabolic process"
            evidence=IMP] [GO:0001666 "response to hypoxia" evidence=IMP]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 GO:GO:0005634
            EMBL:AE014296 GO:GO:0007435 GO:GO:0001078 GO:GO:0001666
            GO:GO:0000978 GO:GO:0000902 GO:GO:0007366 Gene3D:4.10.280.10
            SUPFAM:SSF47459 GO:GO:0016044 GO:GO:0070888 InterPro:IPR018352
            SMART:SM00511 GO:GO:0035289 GO:GO:0007424 GO:GO:0007460
            eggNOG:NOG319418 KO:K09090 OrthoDB:EOG4M37RH GO:GO:0035290
            GO:GO:0035239 EMBL:X15904 EMBL:X15905 EMBL:AY055833 EMBL:AY055834
            EMBL:AY055835 EMBL:AY055836 EMBL:AY055837 EMBL:AY055838
            EMBL:AY055839 EMBL:AY055840 EMBL:AY055841 EMBL:AY055842
            EMBL:AY119633 PIR:S06956 RefSeq:NP_001014577.1 RefSeq:NP_523977.2
            UniGene:Dm.2554 ProteinModelPortal:P14003 SMR:P14003 DIP:DIP-637N
            IntAct:P14003 STRING:P14003 EnsemblMetazoa:FBtr0076569
            EnsemblMetazoa:FBtr0100153 GeneID:38995 KEGG:dme:Dmel_CG6494
            UCSC:CG6494-RA CTD:38995 FlyBase:FBgn0001168
            GeneTree:ENSGT00700000104168 InParanoid:P14003 OMA:NGMQVIP
            PhylomeDB:P14003 ChiTaRS:FUT1 GenomeRNAi:38995 NextBio:811370
            Bgee:P14003 GermOnline:CG6494 Uniprot:P14003
        Length = 337

 Score = 208 (78.3 bits), Expect = 1.1e-16, P = 1.1e-16
 Identities = 41/86 (47%), Positives = 62/86 (72%)

Query:    15 KPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRRQQS-L 73
             KP++E++RRARIN CL+ELK +++ + + +    SKLEKADILE TV+HL +L+RQQ+ +
Sbjct:    36 KPIMEKRRRARINNCLNELKTLILDATKKDPARHSKLEKADILEKTVKHLQELQRQQAAM 95

Query:    74 GLTPEAAYADRFKAGFTHCAAEVSQY 99
                 +    ++FKAGF  C  EVS++
Sbjct:    96 QQAADPKIVNKFKAGFADCVNEVSRF 121


>UNIPROTKB|Q6IRB2 [details] [associations]
            symbol:hes1-a "Transcription factor HES-1-A" species:8355
            "Xenopus laevis" [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IMP] [GO:0005634
            "nucleus" evidence=ISS] [GO:0007219 "Notch signaling pathway"
            evidence=IMP] [GO:0043425 "bHLH transcription factor binding"
            evidence=IPI] [GO:0043565 "sequence-specific DNA binding"
            evidence=IDA] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=IMP] [GO:0046982 "protein
            heterodimerization activity" evidence=IPI] [GO:0048635 "negative
            regulation of muscle organ development" evidence=IMP]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 GO:GO:0007275
            GO:GO:0005634 GO:GO:0043565 GO:GO:0007219 GO:GO:0006351
            GO:GO:0000122 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR018352
            SMART:SM00511 EMBL:U36194 EMBL:BC070988 RefSeq:NP_001081396.1
            UniGene:Xl.21817 ProteinModelPortal:Q6IRB2 GeneID:397813
            KEGG:xla:397813 CTD:397813 Xenbase:XB-GENE-865756 KO:K06054
            GO:GO:0048635 Uniprot:Q6IRB2
        Length = 267

 Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
 Identities = 39/89 (43%), Positives = 65/89 (73%)

Query:    15 KPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRR-QQSL 73
             KP++E++RRARIN  L +LK +++ +L+ +    SKLEKADILE+TV+HL  L+R Q S 
Sbjct:    39 KPIMEKRRRARINESLGQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQRVQMSA 98

Query:    74 GLTPEAAYADRFKAGFTHCAAEVSQYLAS 102
              L+ + +   +++AGF+ C  EV+++L++
Sbjct:    99 ALSTDPSVLGKYRAGFSECMNEVTRFLST 127


>UNIPROTKB|Q6PBD4 [details] [associations]
            symbol:hes4 "Transcription factor HES-4" species:8364
            "Xenopus (Silurana) tropicalis" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0002088 "lens development in camera-type eye" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISS] [GO:0008283 "cell
            proliferation" evidence=ISS] [GO:0014029 "neural crest formation"
            evidence=ISS] [GO:0021501 "prechordal plate formation"
            evidence=ISS] [GO:0033504 "floor plate development" evidence=ISS]
            [GO:0043066 "negative regulation of apoptotic process"
            evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
            evidence=ISS] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0046982 "protein
            heterodimerization activity" evidence=ISS] [GO:0048642 "negative
            regulation of skeletal muscle tissue development" evidence=ISS]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 GO:GO:0005634
            GO:GO:0043066 GO:GO:0008283 GO:GO:0043565 GO:GO:0007219
            GO:GO:0006351 GO:GO:0000122 GO:GO:0007517 GO:GO:0046982
            Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR018352 SMART:SM00511
            GO:GO:0002088 GO:GO:0033504 GO:GO:0048642 eggNOG:NOG319418
            GO:GO:0021501 GO:GO:0014029 GeneTree:ENSGT00700000104168 KO:K06054
            HOGENOM:HOG000236346 OrthoDB:EOG4TTGK6 CTD:57801 EMBL:AC151819
            EMBL:CR760275 EMBL:BC059761 RefSeq:NP_988870.1 UniGene:Str.6018
            ProteinModelPortal:Q6PBD4 STRING:Q6PBD4 Ensembl:ENSXETT00000003678
            GeneID:394465 KEGG:xtr:394465 Xenbase:XB-GENE-487830
            InParanoid:Q6PBD4 Bgee:Q6PBD4 Uniprot:Q6PBD4
        Length = 281

 Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
 Identities = 39/89 (43%), Positives = 64/89 (71%)

Query:    15 KPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRR-QQSL 73
             KP++E++RRARIN  L +LK +++ +L+ +    SKLEKADILE+TV+HL  L+R Q + 
Sbjct:    39 KPIMEKRRRARINESLGQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQRVQMTA 98

Query:    74 GLTPEAAYADRFKAGFTHCAAEVSQYLAS 102
              LT + +   +++AGF  C  EV+++L++
Sbjct:    99 ALTADPSVLGKYRAGFNECMNEVTRFLST 127


>UNIPROTKB|Q90VV1 [details] [associations]
            symbol:hes4-b "Transcription factor HES-4-B" species:8355
            "Xenopus laevis" [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IMP] [GO:0002088 "lens
            development in camera-type eye" evidence=IMP] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISS]
            [GO:0008283 "cell proliferation" evidence=IMP] [GO:0014029 "neural
            crest formation" evidence=IMP] [GO:0021501 "prechordal plate
            formation" evidence=IMP] [GO:0033504 "floor plate development"
            evidence=IMP] [GO:0043066 "negative regulation of apoptotic
            process" evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
            evidence=IPI] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=IMP] [GO:0046982 "protein
            heterodimerization activity" evidence=IPI] [GO:0048642 "negative
            regulation of skeletal muscle tissue development" evidence=IMP]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 GO:GO:0005634
            GO:GO:0043066 GO:GO:0008283 GO:GO:0043565 GO:GO:0007219
            GO:GO:0006351 GO:GO:0000122 GO:GO:0007517 Gene3D:4.10.280.10
            SUPFAM:SSF47459 InterPro:IPR018352 SMART:SM00511 GO:GO:0002088
            GO:GO:0033504 GO:GO:0048642 GO:GO:0021501 GO:GO:0014029 KO:K06054
            EMBL:AF383160 EMBL:BC070547 EMBL:AF356000 RefSeq:NP_001082161.1
            UniGene:Xl.86822 ProteinModelPortal:Q90VV1 GeneID:398258
            KEGG:xla:398258 CTD:398258 Xenbase:XB-GENE-865740 Uniprot:Q90VV1
        Length = 277

 Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
 Identities = 39/89 (43%), Positives = 64/89 (71%)

Query:    15 KPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRR-QQSL 73
             KP++E++RRARIN  L +LK +++ +L+ +    SKLEKADILE+TV+HL  L+R Q + 
Sbjct:    39 KPIMEKRRRARINESLGQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQRVQMTA 98

Query:    74 GLTPEAAYADRFKAGFTHCAAEVSQYLAS 102
              LT + +   +++AGF  C  EV+++L++
Sbjct:    99 ALTADPSVLGKYRAGFNECMNEVTRFLST 127


>UNIPROTKB|G3N2D5 [details] [associations]
            symbol:HES1 "Transcription factor HES-1" species:9913 "Bos
            taurus" [GO:2000974 "negative regulation of pro-B cell
            differentiation" evidence=IEA] [GO:2000737 "negative regulation of
            stem cell differentiation" evidence=IEA] [GO:2000227 "negative
            regulation of pancreatic A cell differentiation" evidence=IEA]
            [GO:0097150 "neuronal stem cell maintenance" evidence=IEA]
            [GO:0097084 "vascular smooth muscle cell development" evidence=IEA]
            [GO:0090102 "cochlea development" evidence=IEA] [GO:0072282
            "metanephric nephron tubule morphogenesis" evidence=IEA]
            [GO:0072141 "renal interstitial cell development" evidence=IEA]
            [GO:0072050 "S-shaped body morphogenesis" evidence=IEA] [GO:0072049
            "comma-shaped body morphogenesis" evidence=IEA] [GO:0072012
            "glomerulus vasculature development" evidence=IEA] [GO:0071820
            "N-box binding" evidence=IEA] [GO:0061309 "cardiac neural crest
            cell development involved in outflow tract morphogenesis"
            evidence=IEA] [GO:0061106 "negative regulation of stomach
            neuroendocrine cell differentiation" evidence=IEA] [GO:0061009
            "common bile duct development" evidence=IEA] [GO:0060716
            "labyrinthine layer blood vessel development" evidence=IEA]
            [GO:0060675 "ureteric bud morphogenesis" evidence=IEA] [GO:0060412
            "ventricular septum morphogenesis" evidence=IEA] [GO:0060253
            "negative regulation of glial cell proliferation" evidence=IEA]
            [GO:0060164 "regulation of timing of neuron differentiation"
            evidence=IEA] [GO:0060037 "pharyngeal system development"
            evidence=IEA] [GO:0048715 "negative regulation of oligodendrocyte
            differentiation" evidence=IEA] [GO:0048711 "positive regulation of
            astrocyte differentiation" evidence=IEA] [GO:0048667 "cell
            morphogenesis involved in neuron differentiation" evidence=IEA]
            [GO:0048538 "thymus development" evidence=IEA] [GO:0048469 "cell
            maturation" evidence=IEA] [GO:0046331 "lateral inhibition"
            evidence=IEA] [GO:0045977 "positive regulation of mitotic cell
            cycle, embryonic" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0045747 "positive regulation of Notch signaling pathway"
            evidence=IEA] [GO:0045608 "negative regulation of auditory receptor
            cell differentiation" evidence=IEA] [GO:0045598 "regulation of fat
            cell differentiation" evidence=IEA] [GO:0043388 "positive
            regulation of DNA binding" evidence=IEA] [GO:0042826 "histone
            deacetylase binding" evidence=IEA] [GO:0042803 "protein
            homodimerization activity" evidence=IEA] [GO:0042668 "auditory
            receptor cell fate determination" evidence=IEA] [GO:0042517
            "positive regulation of tyrosine phosphorylation of Stat3 protein"
            evidence=IEA] [GO:0042102 "positive regulation of T cell
            proliferation" evidence=IEA] [GO:0035910 "ascending aorta
            morphogenesis" evidence=IEA] [GO:0035019 "somatic stem cell
            maintenance" evidence=IEA] [GO:0031016 "pancreas development"
            evidence=IEA] [GO:0030901 "midbrain development" evidence=IEA]
            [GO:0030513 "positive regulation of BMP signaling pathway"
            evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
            [GO:0021984 "adenohypophysis development" evidence=IEA] [GO:0021575
            "hindbrain morphogenesis" evidence=IEA] [GO:0021558 "trochlear
            nerve development" evidence=IEA] [GO:0021557 "oculomotor nerve
            development" evidence=IEA] [GO:0021555 "midbrain-hindbrain boundary
            morphogenesis" evidence=IEA] [GO:0021537 "telencephalon
            development" evidence=IEA] [GO:0016477 "cell migration"
            evidence=IEA] [GO:0007262 "STAT protein import into nucleus"
            evidence=IEA] [GO:0007224 "smoothened signaling pathway"
            evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
            [GO:0007155 "cell adhesion" evidence=IEA] [GO:0006461 "protein
            complex assembly" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003266
            "regulation of secondary heart field cardioblast proliferation"
            evidence=IEA] [GO:0003143 "embryonic heart tube morphogenesis"
            evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
            [GO:0001078 "RNA polymerase II core promoter proximal region
            sequence-specific DNA binding transcription factor activity
            involved in negative regulation of transcription" evidence=IEA]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 GO:GO:0005634
            GO:GO:0005737 GO:GO:0016477 GO:GO:0006461 GO:GO:0030324
            GO:GO:0001078 GO:GO:0001701 GO:GO:0045944 GO:GO:0007155
            GO:GO:0007219 GO:GO:0001889 GO:GO:0045747 GO:GO:0030901
            GO:GO:0030513 GO:GO:0060037 GO:GO:0042102 GO:GO:0097084
            GO:GO:0046331 GO:GO:0048538 GO:GO:0035019 Gene3D:4.10.280.10
            SUPFAM:SSF47459 GO:GO:0031016 GO:GO:0045598 GO:GO:0048844
            GO:GO:0072012 GO:GO:0003151 GO:GO:0007224 GO:GO:0042517
            GO:GO:0021984 GO:GO:0021575 GO:GO:0090102 GO:GO:0042668
            GO:GO:0048469 InterPro:IPR018352 SMART:SM00511 GO:GO:0048711
            GO:GO:0021537 GO:GO:0060675 GO:GO:0048715 GO:GO:0043388
            GO:GO:0003281 GO:GO:0003266 GO:GO:0045608 GO:GO:0097150
            GO:GO:0048667 GO:GO:0007262 GO:GO:0060253 GO:GO:0021555
            GeneTree:ENSGT00700000104168 GO:GO:0061309 GO:GO:0071820
            GO:GO:2000974 OMA:TKVYGGF GO:GO:0072049 GO:GO:0061009 GO:GO:0072282
            GO:GO:2000227 GO:GO:2000737 GO:GO:0061106 GO:GO:0021557
            GO:GO:0060164 GO:GO:0072141 GO:GO:0072050 GO:GO:0021558
            EMBL:DAAA02001738 Ensembl:ENSBTAT00000062965 Uniprot:G3N2D5
        Length = 304

 Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
 Identities = 38/89 (42%), Positives = 65/89 (73%)

Query:    15 KPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRR-QQSL 73
             KP++E++RRARIN  L +LK +++ +L+ +    SKLEKADILE+TV+HL  L+R Q + 
Sbjct:    39 KPIMEKRRRARINESLSQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQRAQMTA 98

Query:    74 GLTPEAAYADRFKAGFTHCAAEVSQYLAS 102
              L+ + +   +++AGF+ C  EV+++L++
Sbjct:    99 ALSTDPSVLGKYRAGFSECMNEVTRFLST 127


>UNIPROTKB|Q3ZBG4 [details] [associations]
            symbol:HES1 "Transcription factor HES-1" species:9913 "Bos
            taurus" [GO:0021861 "forebrain radial glial cell differentiation"
            evidence=ISS] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0043565 "sequence-specific DNA binding" evidence=ISS]
            [GO:2000978 "negative regulation of forebrain neuron
            differentiation" evidence=ISS] [GO:0046427 "positive regulation of
            JAK-STAT cascade" evidence=ISS] [GO:0043388 "positive regulation of
            DNA binding" evidence=ISS] [GO:0007262 "STAT protein import into
            nucleus" evidence=ISS] [GO:0071820 "N-box binding" evidence=ISS]
            [GO:0001078 "RNA polymerase II core promoter proximal region
            sequence-specific DNA binding transcription factor activity
            involved in negative regulation of transcription" evidence=ISS]
            [GO:0042517 "positive regulation of tyrosine phosphorylation of
            Stat3 protein" evidence=ISS] [GO:0006461 "protein complex assembly"
            evidence=ISS] [GO:0042803 "protein homodimerization activity"
            evidence=ISS] [GO:2000974 "negative regulation of pro-B cell
            differentiation" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
            [GO:0060253 "negative regulation of glial cell proliferation"
            evidence=ISS] [GO:0048715 "negative regulation of oligodendrocyte
            differentiation" evidence=ISS] [GO:0048711 "positive regulation of
            astrocyte differentiation" evidence=ISS] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 GO:GO:0005634 GO:GO:0042803
            GO:GO:0006461 GO:GO:0001078 GO:GO:0043565 Gene3D:4.10.280.10
            SUPFAM:SSF47459 GO:GO:0042517 InterPro:IPR018352 SMART:SM00511
            GO:GO:0048711 GO:GO:0048715 GO:GO:0043388 eggNOG:NOG319418
            GO:GO:0007262 GO:GO:0060253 GO:GO:0021861
            GeneTree:ENSGT00700000104168 KO:K06054 EMBL:BC103309
            IPI:IPI00694289 RefSeq:NP_001029850.1 UniGene:Bt.49417
            ProteinModelPortal:Q3ZBG4 STRING:Q3ZBG4 PRIDE:Q3ZBG4
            Ensembl:ENSBTAT00000000742 GeneID:539547 KEGG:bta:539547 CTD:3280
            HOGENOM:HOG000236346 HOVERGEN:HBG005960 InParanoid:Q3ZBG4
            OrthoDB:EOG4TTGK6 NextBio:20878064 GO:GO:0071820 GO:GO:2000978
            GO:GO:2000974 Uniprot:Q3ZBG4
        Length = 280

 Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
 Identities = 38/89 (42%), Positives = 65/89 (73%)

Query:    15 KPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRR-QQSL 73
             KP++E++RRARIN  L +LK +++ +L+ +    SKLEKADILE+TV+HL  L+R Q + 
Sbjct:    39 KPIMEKRRRARINESLSQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQRAQMTA 98

Query:    74 GLTPEAAYADRFKAGFTHCAAEVSQYLAS 102
              L+ + +   +++AGF+ C  EV+++L++
Sbjct:    99 ALSTDPSVLGKYRAGFSECMNEVTRFLST 127


>UNIPROTKB|Q14469 [details] [associations]
            symbol:HES1 "Transcription factor HES-1" species:9606 "Homo
            sapiens" [GO:0001889 "liver development" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA]
            [GO:0007224 "smoothened signaling pathway" evidence=IEA]
            [GO:0016477 "cell migration" evidence=IEA] [GO:0021537
            "telencephalon development" evidence=IEA] [GO:0021555
            "midbrain-hindbrain boundary morphogenesis" evidence=IEA]
            [GO:0021557 "oculomotor nerve development" evidence=IEA]
            [GO:0021558 "trochlear nerve development" evidence=IEA] [GO:0021575
            "hindbrain morphogenesis" evidence=IEA] [GO:0021984
            "adenohypophysis development" evidence=IEA] [GO:0030324 "lung
            development" evidence=IEA] [GO:0030513 "positive regulation of BMP
            signaling pathway" evidence=IEA] [GO:0030901 "midbrain development"
            evidence=IEA] [GO:0035019 "somatic stem cell maintenance"
            evidence=IEA] [GO:0042102 "positive regulation of T cell
            proliferation" evidence=IEA] [GO:0042668 "auditory receptor cell
            fate determination" evidence=IEA] [GO:0045598 "regulation of fat
            cell differentiation" evidence=IEA] [GO:0045608 "negative
            regulation of auditory receptor cell differentiation" evidence=IEA]
            [GO:0045747 "positive regulation of Notch signaling pathway"
            evidence=IEA] [GO:0046331 "lateral inhibition" evidence=IEA]
            [GO:0048469 "cell maturation" evidence=IEA] [GO:0048667 "cell
            morphogenesis involved in neuron differentiation" evidence=IEA]
            [GO:0060164 "regulation of timing of neuron differentiation"
            evidence=IEA] [GO:0060675 "ureteric bud morphogenesis"
            evidence=IEA] [GO:0060716 "labyrinthine layer blood vessel
            development" evidence=IEA] [GO:0061009 "common bile duct
            development" evidence=IEA] [GO:0061106 "negative regulation of
            stomach neuroendocrine cell differentiation" evidence=IEA]
            [GO:0072012 "glomerulus vasculature development" evidence=IEA]
            [GO:0072049 "comma-shaped body morphogenesis" evidence=IEA]
            [GO:0072050 "S-shaped body morphogenesis" evidence=IEA] [GO:0072141
            "renal interstitial cell development" evidence=IEA] [GO:0072282
            "metanephric nephron tubule morphogenesis" evidence=IEA]
            [GO:0090102 "cochlea development" evidence=IEA] [GO:2000227
            "negative regulation of pancreatic A cell differentiation"
            evidence=IEA] [GO:0007219 "Notch signaling pathway"
            evidence=IMP;IDA;TAS] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IDA] [GO:0048711 "positive
            regulation of astrocyte differentiation" evidence=ISS] [GO:0048715
            "negative regulation of oligodendrocyte differentiation"
            evidence=ISS] [GO:0060253 "negative regulation of glial cell
            proliferation" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
            [GO:2000974 "negative regulation of pro-B cell differentiation"
            evidence=IMP] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IDA] [GO:0042803 "protein
            homodimerization activity" evidence=ISS] [GO:0006461 "protein
            complex assembly" evidence=ISS] [GO:0042517 "positive regulation of
            tyrosine phosphorylation of Stat3 protein" evidence=ISS]
            [GO:0001078 "RNA polymerase II core promoter proximal region
            sequence-specific DNA binding transcription factor activity
            involved in negative regulation of transcription" evidence=ISS]
            [GO:0071820 "N-box binding" evidence=ISS] [GO:0007262 "STAT protein
            import into nucleus" evidence=ISS] [GO:0043388 "positive regulation
            of DNA binding" evidence=ISS] [GO:0046427 "positive regulation of
            JAK-STAT cascade" evidence=ISS] [GO:2000978 "negative regulation of
            forebrain neuron differentiation" evidence=ISS] [GO:0043565
            "sequence-specific DNA binding" evidence=ISS] [GO:0021861
            "forebrain radial glial cell differentiation" evidence=ISS]
            [GO:0097150 "neuronal stem cell maintenance" evidence=IEP]
            [GO:2000737 "negative regulation of stem cell differentiation"
            evidence=IMP] [GO:0008134 "transcription factor binding"
            evidence=NAS] [GO:0003677 "DNA binding" evidence=TAS] [GO:0007399
            "nervous system development" evidence=TAS] [GO:0031018 "endocrine
            pancreas development" evidence=TAS] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0042826 "histone deacetylase binding"
            evidence=IPI] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=IDA] [GO:0003143 "embryonic heart tube
            morphogenesis" evidence=ISS] [GO:0035910 "ascending aorta
            morphogenesis" evidence=ISS] [GO:0045977 "positive regulation of
            mitotic cell cycle, embryonic" evidence=ISS] [GO:0060412
            "ventricular septum morphogenesis" evidence=ISS] [GO:0003266
            "regulation of secondary heart field cardioblast proliferation"
            evidence=ISS] [GO:0061309 "cardiac neural crest cell development
            involved in outflow tract morphogenesis" evidence=ISS] [GO:0003151
            "outflow tract morphogenesis" evidence=ISS] [GO:0003281
            "ventricular septum development" evidence=ISS] [GO:0008284
            "positive regulation of cell proliferation" evidence=ISS]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=ISS] [GO:0048538 "thymus
            development" evidence=ISS] [GO:0048844 "artery morphogenesis"
            evidence=ISS] [GO:0060037 "pharyngeal system development"
            evidence=ISS] [GO:0097084 "vascular smooth muscle cell development"
            evidence=ISS] InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010
            Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353
            GO:GO:0005634 GO:GO:0005737 Reactome:REACT_111045
            Reactome:REACT_111102 GO:GO:0042803 GO:GO:0016477 GO:GO:0006461
            GO:GO:0030324 GO:GO:0008284 GO:GO:0001078 GO:GO:0043565
            GO:GO:0001701 GO:GO:0045944 GO:GO:0007155 GO:GO:0007219
            GO:GO:0001889 GO:GO:0045747 GO:GO:0030901 GO:GO:0030513
            GO:GO:0003143 GO:GO:0060037 GO:GO:0042102 GO:GO:0097084
            GO:GO:0046331 GO:GO:0048538 GO:GO:0035019 Gene3D:4.10.280.10
            SUPFAM:SSF47459 GO:GO:0008134 GO:GO:0031018 GO:GO:0045598
            GO:GO:0072012 GO:GO:0003151 GO:GO:0007224 GO:GO:0042517
            GO:GO:0021984 GO:GO:0021575 GO:GO:0090102 GO:GO:0042668
            GO:GO:0048469 InterPro:IPR018352 SMART:SM00511 GO:GO:0048711
            GO:GO:0021537 GO:GO:0060675 GO:GO:0048715 GO:GO:0043388
            GO:GO:0060412 GO:GO:0003266 GO:GO:0045608 GO:GO:0097150
            eggNOG:NOG319418 GO:GO:0048667 GO:GO:0007262 CleanEx:HS_HES1
            GO:GO:0060253 GO:GO:0021555 GO:GO:0021861 GO:GO:0061309 KO:K06054
            CTD:3280 HOGENOM:HOG000236346 HOVERGEN:HBG005960 OrthoDB:EOG4TTGK6
            GO:GO:0071820 GO:GO:2000978 GO:GO:2000974 EMBL:L19314 EMBL:AF264785
            EMBL:AK000415 EMBL:CR541843 IPI:IPI00030964 PIR:A53027
            RefSeq:NP_005515.1 UniGene:Hs.250666 ProteinModelPortal:Q14469
            SMR:Q14469 IntAct:Q14469 STRING:Q14469 PhosphoSite:Q14469
            DMDM:3913825 PRIDE:Q14469 DNASU:3280 Ensembl:ENST00000232424
            GeneID:3280 KEGG:hsa:3280 UCSC:uc003ftq.2 GeneCards:GC03P193853
            HGNC:HGNC:5192 MIM:139605 neXtProt:NX_Q14469 PharmGKB:PA29465
            InParanoid:Q14469 OMA:TKVYGGF PhylomeDB:Q14469 GenomeRNAi:3280
            NextBio:13023 ArrayExpress:Q14469 Bgee:Q14469 Genevestigator:Q14469
            GermOnline:ENSG00000114315 GO:GO:0035910 GO:GO:0072049
            GO:GO:0061009 GO:GO:0072282 GO:GO:2000227 GO:GO:2000737
            GO:GO:0061106 GO:GO:0021557 GO:GO:0045977 GO:GO:0060164
            GO:GO:0072141 GO:GO:0072050 GO:GO:0021558 Uniprot:Q14469
        Length = 280

 Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
 Identities = 38/89 (42%), Positives = 65/89 (73%)

Query:    15 KPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRR-QQSL 73
             KP++E++RRARIN  L +LK +++ +L+ +    SKLEKADILE+TV+HL  L+R Q + 
Sbjct:    39 KPIMEKRRRARINESLSQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQRAQMTA 98

Query:    74 GLTPEAAYADRFKAGFTHCAAEVSQYLAS 102
              L+ + +   +++AGF+ C  EV+++L++
Sbjct:    99 ALSTDPSVLGKYRAGFSECMNEVTRFLST 127


>UNIPROTKB|I3LM61 [details] [associations]
            symbol:HES1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:2000974 "negative regulation of pro-B cell
            differentiation" evidence=IEA] [GO:2000737 "negative regulation of
            stem cell differentiation" evidence=IEA] [GO:2000227 "negative
            regulation of pancreatic A cell differentiation" evidence=IEA]
            [GO:0097150 "neuronal stem cell maintenance" evidence=IEA]
            [GO:0097084 "vascular smooth muscle cell development" evidence=IEA]
            [GO:0090102 "cochlea development" evidence=IEA] [GO:0072282
            "metanephric nephron tubule morphogenesis" evidence=IEA]
            [GO:0072141 "renal interstitial cell development" evidence=IEA]
            [GO:0072050 "S-shaped body morphogenesis" evidence=IEA] [GO:0072049
            "comma-shaped body morphogenesis" evidence=IEA] [GO:0072012
            "glomerulus vasculature development" evidence=IEA] [GO:0071820
            "N-box binding" evidence=IEA] [GO:0061309 "cardiac neural crest
            cell development involved in outflow tract morphogenesis"
            evidence=IEA] [GO:0061106 "negative regulation of stomach
            neuroendocrine cell differentiation" evidence=IEA] [GO:0061009
            "common bile duct development" evidence=IEA] [GO:0060716
            "labyrinthine layer blood vessel development" evidence=IEA]
            [GO:0060675 "ureteric bud morphogenesis" evidence=IEA] [GO:0060412
            "ventricular septum morphogenesis" evidence=IEA] [GO:0060253
            "negative regulation of glial cell proliferation" evidence=IEA]
            [GO:0060164 "regulation of timing of neuron differentiation"
            evidence=IEA] [GO:0060037 "pharyngeal system development"
            evidence=IEA] [GO:0048715 "negative regulation of oligodendrocyte
            differentiation" evidence=IEA] [GO:0048711 "positive regulation of
            astrocyte differentiation" evidence=IEA] [GO:0048667 "cell
            morphogenesis involved in neuron differentiation" evidence=IEA]
            [GO:0048538 "thymus development" evidence=IEA] [GO:0048469 "cell
            maturation" evidence=IEA] [GO:0046331 "lateral inhibition"
            evidence=IEA] [GO:0045977 "positive regulation of mitotic cell
            cycle, embryonic" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0045747 "positive regulation of Notch signaling pathway"
            evidence=IEA] [GO:0045608 "negative regulation of auditory receptor
            cell differentiation" evidence=IEA] [GO:0045598 "regulation of fat
            cell differentiation" evidence=IEA] [GO:0043388 "positive
            regulation of DNA binding" evidence=IEA] [GO:0042826 "histone
            deacetylase binding" evidence=IEA] [GO:0042803 "protein
            homodimerization activity" evidence=IEA] [GO:0042668 "auditory
            receptor cell fate determination" evidence=IEA] [GO:0042517
            "positive regulation of tyrosine phosphorylation of Stat3 protein"
            evidence=IEA] [GO:0042102 "positive regulation of T cell
            proliferation" evidence=IEA] [GO:0035910 "ascending aorta
            morphogenesis" evidence=IEA] [GO:0035019 "somatic stem cell
            maintenance" evidence=IEA] [GO:0031016 "pancreas development"
            evidence=IEA] [GO:0030901 "midbrain development" evidence=IEA]
            [GO:0030513 "positive regulation of BMP signaling pathway"
            evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
            [GO:0021984 "adenohypophysis development" evidence=IEA] [GO:0021575
            "hindbrain morphogenesis" evidence=IEA] [GO:0021558 "trochlear
            nerve development" evidence=IEA] [GO:0021557 "oculomotor nerve
            development" evidence=IEA] [GO:0021555 "midbrain-hindbrain boundary
            morphogenesis" evidence=IEA] [GO:0021537 "telencephalon
            development" evidence=IEA] [GO:0016477 "cell migration"
            evidence=IEA] [GO:0007262 "STAT protein import into nucleus"
            evidence=IEA] [GO:0007224 "smoothened signaling pathway"
            evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
            [GO:0007155 "cell adhesion" evidence=IEA] [GO:0006461 "protein
            complex assembly" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003266
            "regulation of secondary heart field cardioblast proliferation"
            evidence=IEA] [GO:0003143 "embryonic heart tube morphogenesis"
            evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
            [GO:0001078 "RNA polymerase II core promoter proximal region
            sequence-specific DNA binding transcription factor activity
            involved in negative regulation of transcription" evidence=IEA]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 GO:GO:0005634
            GO:GO:0005737 GO:GO:0016477 GO:GO:0006461 GO:GO:0030324
            GO:GO:0001078 GO:GO:0001701 GO:GO:0045944 GO:GO:0007155
            GO:GO:0007219 GO:GO:0001889 GO:GO:0045747 GO:GO:0030901
            GO:GO:0030513 GO:GO:0060037 GO:GO:0042102 GO:GO:0097084
            GO:GO:0046331 GO:GO:0048538 GO:GO:0035019 Gene3D:4.10.280.10
            SUPFAM:SSF47459 GO:GO:0031016 GO:GO:0045598 GO:GO:0048844
            GO:GO:0072012 GO:GO:0003151 GO:GO:0007224 GO:GO:0042517
            GO:GO:0021984 GO:GO:0021575 GO:GO:0090102 GO:GO:0042668
            GO:GO:0048469 InterPro:IPR018352 SMART:SM00511 GO:GO:0048711
            GO:GO:0021537 GO:GO:0060675 GO:GO:0048715 GO:GO:0043388
            GO:GO:0003281 GO:GO:0003266 GO:GO:0045608 GO:GO:0097150
            GO:GO:0048667 GO:GO:0007262 GO:GO:0060253 GO:GO:0021555
            GeneTree:ENSGT00700000104168 GO:GO:0061309 GO:GO:0071820
            GO:GO:2000974 OMA:TKVYGGF GO:GO:0072049 GO:GO:0061009 GO:GO:0072282
            GO:GO:2000227 GO:GO:2000737 GO:GO:0061106 GO:GO:0021557
            GO:GO:0060164 GO:GO:0072141 GO:GO:0072050 GO:GO:0021558
            EMBL:FP565159 ProteinModelPortal:I3LM61 PRIDE:I3LM61
            Ensembl:ENSSSCT00000026743 Uniprot:I3LM61
        Length = 280

 Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
 Identities = 38/89 (42%), Positives = 65/89 (73%)

Query:    15 KPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRR-QQSL 73
             KP++E++RRARIN  L +LK +++ +L+ +    SKLEKADILE+TV+HL  L+R Q + 
Sbjct:    39 KPIMEKRRRARINESLSQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQRAQMTA 98

Query:    74 GLTPEAAYADRFKAGFTHCAAEVSQYLAS 102
              L+ + +   +++AGF+ C  EV+++L++
Sbjct:    99 ALSTDPSVLGKYRAGFSECMNEVTRFLST 127


>MGI|MGI:104853 [details] [associations]
            symbol:Hes1 "hairy and enhancer of split 1 (Drosophila)"
            species:10090 "Mus musculus" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter"
            evidence=ISO;IGI;IMP;IDA] [GO:0000981 "sequence-specific DNA
            binding RNA polymerase II transcription factor activity"
            evidence=IDA] [GO:0001078 "RNA polymerase II core promoter proximal
            region sequence-specific DNA binding transcription factor activity
            involved in negative regulation of transcription" evidence=IDA]
            [GO:0001701 "in utero embryonic development" evidence=IGI]
            [GO:0001889 "liver development" evidence=IMP] [GO:0003143
            "embryonic heart tube morphogenesis" evidence=IMP] [GO:0003151
            "outflow tract morphogenesis" evidence=IMP] [GO:0003266 "regulation
            of secondary heart field cardioblast proliferation" evidence=IMP]
            [GO:0003281 "ventricular septum development" evidence=IMP]
            [GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0006357 "regulation of transcription from RNA polymerase II
            promoter" evidence=IGI] [GO:0006461 "protein complex assembly"
            evidence=IDA] [GO:0007155 "cell adhesion" evidence=IGI] [GO:0007219
            "Notch signaling pathway" evidence=ISO;NAS;TAS] [GO:0007224
            "smoothened signaling pathway" evidence=IDA] [GO:0007262 "STAT
            protein import into nucleus" evidence=IDA] [GO:0007389 "pattern
            specification process" evidence=IGI;IMP] [GO:0008134 "transcription
            factor binding" evidence=NAS] [GO:0008284 "positive regulation of
            cell proliferation" evidence=IMP] [GO:0016477 "cell migration"
            evidence=IGI] [GO:0021537 "telencephalon development"
            evidence=IGI;IMP] [GO:0021555 "midbrain-hindbrain boundary
            morphogenesis" evidence=IGI] [GO:0021557 "oculomotor nerve
            development" evidence=IGI] [GO:0021558 "trochlear nerve
            development" evidence=IGI] [GO:0021575 "hindbrain morphogenesis"
            evidence=IGI] [GO:0021861 "forebrain radial glial cell
            differentiation" evidence=ISO] [GO:0021915 "neural tube
            development" evidence=IGI] [GO:0021983 "pituitary gland
            development" evidence=IGI;IMP] [GO:0021984 "adenohypophysis
            development" evidence=IMP] [GO:0030324 "lung development"
            evidence=IMP] [GO:0030513 "positive regulation of BMP signaling
            pathway" evidence=IGI] [GO:0030901 "midbrain development"
            evidence=IGI] [GO:0031016 "pancreas development" evidence=IMP]
            [GO:0035019 "somatic stem cell maintenance" evidence=IMP]
            [GO:0035909 "aorta morphogenesis" evidence=IMP] [GO:0035910
            "ascending aorta morphogenesis" evidence=IMP] [GO:0042102 "positive
            regulation of T cell proliferation" evidence=IMP] [GO:0042491
            "auditory receptor cell differentiation" evidence=IMP] [GO:0042517
            "positive regulation of tyrosine phosphorylation of Stat3 protein"
            evidence=IDA] [GO:0042668 "auditory receptor cell fate
            determination" evidence=IMP] [GO:0042803 "protein homodimerization
            activity" evidence=IDA] [GO:0042826 "histone deacetylase binding"
            evidence=ISO] [GO:0043388 "positive regulation of DNA binding"
            evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
            evidence=ISO] [GO:0045165 "cell fate commitment" evidence=IMP]
            [GO:0045596 "negative regulation of cell differentiation"
            evidence=IMP] [GO:0045598 "regulation of fat cell differentiation"
            evidence=IMP] [GO:0045608 "negative regulation of auditory receptor
            cell differentiation" evidence=IMP] [GO:0045665 "negative
            regulation of neuron differentiation" evidence=IGI;IMP] [GO:0045747
            "positive regulation of Notch signaling pathway" evidence=IMP]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=ISO;IMP] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=IMP] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IGI;IMP] [GO:0045977 "positive regulation of mitotic cell
            cycle, embryonic" evidence=IMP] [GO:0046331 "lateral inhibition"
            evidence=IMP] [GO:0046427 "positive regulation of JAK-STAT cascade"
            evidence=IDA] [GO:0046983 "protein dimerization activity"
            evidence=IEA] [GO:0048469 "cell maturation" evidence=IGI]
            [GO:0048505 "regulation of timing of cell differentiation"
            evidence=IMP] [GO:0048538 "thymus development" evidence=IMP]
            [GO:0048667 "cell morphogenesis involved in neuron differentiation"
            evidence=IGI] [GO:0048711 "positive regulation of astrocyte
            differentiation" evidence=IDA] [GO:0048715 "negative regulation of
            oligodendrocyte differentiation" evidence=IDA] [GO:0048844 "artery
            morphogenesis" evidence=IMP] [GO:0050767 "regulation of
            neurogenesis" evidence=IGI] [GO:0060037 "pharyngeal system
            development" evidence=IMP] [GO:0060164 "regulation of timing of
            neuron differentiation" evidence=IGI;IMP] [GO:0060253 "negative
            regulation of glial cell proliferation" evidence=IDA] [GO:0060412
            "ventricular septum morphogenesis" evidence=IMP] [GO:0060716
            "labyrinthine layer blood vessel development" evidence=IMP]
            [GO:0061009 "common bile duct development" evidence=IMP]
            [GO:0061106 "negative regulation of stomach neuroendocrine cell
            differentiation" evidence=IMP] [GO:0061309 "cardiac neural crest
            cell development involved in outflow tract morphogenesis"
            evidence=IMP] [GO:0071820 "N-box binding" evidence=IDA] [GO:0090102
            "cochlea development" evidence=IGI;IMP] [GO:0097084 "vascular
            smooth muscle cell development" evidence=IMP] [GO:0097150 "neuronal
            stem cell maintenance" evidence=ISO;IMP] [GO:2000227 "negative
            regulation of pancreatic A cell differentiation" evidence=IMP]
            [GO:2000737 "negative regulation of stem cell differentiation"
            evidence=ISO] [GO:2000974 "negative regulation of pro-B cell
            differentiation" evidence=ISO] [GO:2000978 "negative regulation of
            forebrain neuron differentiation" evidence=ISO] [GO:2000981
            "negative regulation of inner ear receptor cell differentiation"
            evidence=IMP] Reactome:REACT_13641 InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 MGI:MGI:104853 GO:GO:0005737
            GO:GO:0042803 GO:GO:0005654 GO:GO:0016477 GO:GO:0006461
            GO:GO:0030324 GO:GO:0001078 GO:GO:0043565 GO:GO:0045944
            GO:GO:0007155 GO:GO:0007219 GO:GO:0001889 GO:GO:0045747
            Reactome:REACT_127416 GO:GO:0030901 GO:GO:0030513 GO:GO:0003143
            GO:GO:0060037 GO:GO:0042102 GO:GO:0097084 GO:GO:0046331
            GO:GO:0048538 GO:GO:0035019 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GO:GO:0008134 GO:GO:0031018 GO:GO:0060716 GO:GO:0045598
            GO:GO:0072012 GO:GO:0003151 GO:GO:0007224 GO:GO:0042517
            GO:GO:0021984 GO:GO:0021575 GO:GO:0090102 GO:GO:0042668
            GO:GO:0048469 InterPro:IPR018352 SMART:SM00511 GO:GO:0048711
            GO:GO:0021537 GO:GO:0060675 GO:GO:0048715 GO:GO:0043388
            GO:GO:0060412 GO:GO:0003266 GO:GO:0045608 GO:GO:0097150
            eggNOG:NOG319418 GO:GO:0048667 GO:GO:0007262 GO:GO:0060253
            GO:GO:0021555 GO:GO:0021861 GO:GO:0061309 KO:K06054 CTD:3280
            HOGENOM:HOG000236346 HOVERGEN:HBG005960 OrthoDB:EOG4TTGK6
            GO:GO:0071820 GO:GO:2000978 GO:GO:2000974 OMA:TKVYGGF GO:GO:0035910
            GO:GO:0072049 GO:GO:0061009 GO:GO:0072282 GO:GO:2000227
            GO:GO:2000737 GO:GO:0061106 GO:GO:0021557 GO:GO:0045977
            GO:GO:0060164 GO:GO:0072141 GO:GO:0072050 GO:GO:0021558 EMBL:D16464
            EMBL:BC018375 EMBL:BC051428 IPI:IPI00118341 PIR:A53336
            RefSeq:NP_032261.1 UniGene:Mm.390859 ProteinModelPortal:P35428
            SMR:P35428 STRING:P35428 PhosphoSite:P35428 PRIDE:P35428
            Ensembl:ENSMUST00000023171 GeneID:15205 KEGG:mmu:15205
            InParanoid:P35428 Reactome:REACT_118814 ChEMBL:CHEMBL1075292
            NextBio:287757 Bgee:P35428 CleanEx:MM_HES1 Genevestigator:P35428
            GermOnline:ENSMUSG00000022528 Uniprot:P35428
        Length = 282

 Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
 Identities = 38/89 (42%), Positives = 65/89 (73%)

Query:    15 KPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRR-QQSL 73
             KP++E++RRARIN  L +LK +++ +L+ +    SKLEKADILE+TV+HL  L+R Q + 
Sbjct:    39 KPIMEKRRRARINESLSQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQRAQMTA 98

Query:    74 GLTPEAAYADRFKAGFTHCAAEVSQYLAS 102
              L+ + +   +++AGF+ C  EV+++L++
Sbjct:    99 ALSTDPSVLGKYRAGFSECMNEVTRFLST 127


>RGD|62081 [details] [associations]
            symbol:Hes1 "hairy and enhancer of split 1 (Drosophila)"
           species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
           of transcription from RNA polymerase II promoter"
           evidence=ISO;IDA;IMP] [GO:0000981 "sequence-specific DNA binding RNA
           polymerase II transcription factor activity" evidence=ISO]
           [GO:0001078 "RNA polymerase II core promoter proximal region
           sequence-specific DNA binding transcription factor activity involved
           in negative regulation of transcription" evidence=ISO;ISS]
           [GO:0001701 "in utero embryonic development" evidence=ISO]
           [GO:0001889 "liver development" evidence=ISO] [GO:0003143 "embryonic
           heart tube morphogenesis" evidence=ISO] [GO:0003151 "outflow tract
           morphogenesis" evidence=ISO] [GO:0003266 "regulation of secondary
           heart field cardioblast proliferation" evidence=ISO] [GO:0003281
           "ventricular septum development" evidence=ISO] [GO:0003677 "DNA
           binding" evidence=IEA;ISO] [GO:0003700 "sequence-specific DNA
           binding transcription factor activity" evidence=ISO] [GO:0005515
           "protein binding" evidence=IPI] [GO:0005622 "intracellular"
           evidence=ISO] [GO:0005634 "nucleus" evidence=IEA;ISO;ISS]
           [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005737 "cytoplasm"
           evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
           evidence=IEA] [GO:0006355 "regulation of transcription,
           DNA-dependent" evidence=IEA] [GO:0006357 "regulation of
           transcription from RNA polymerase II promoter" evidence=ISO]
           [GO:0006461 "protein complex assembly" evidence=ISO;ISS] [GO:0007155
           "cell adhesion" evidence=ISO] [GO:0007219 "Notch signaling pathway"
           evidence=ISO] [GO:0007224 "smoothened signaling pathway"
           evidence=ISO] [GO:0007262 "STAT protein import into nucleus"
           evidence=ISO;ISS] [GO:0007389 "pattern specification process"
           evidence=ISO] [GO:0008284 "positive regulation of cell
           proliferation" evidence=ISO] [GO:0016477 "cell migration"
           evidence=ISO] [GO:0021537 "telencephalon development" evidence=ISO]
           [GO:0021555 "midbrain-hindbrain boundary morphogenesis"
           evidence=ISO] [GO:0021557 "oculomotor nerve development"
           evidence=ISO] [GO:0021558 "trochlear nerve development"
           evidence=ISO] [GO:0021575 "hindbrain morphogenesis" evidence=ISO]
           [GO:0021861 "forebrain radial glial cell differentiation"
           evidence=IDA] [GO:0021915 "neural tube development" evidence=ISO]
           [GO:0021983 "pituitary gland development" evidence=ISO] [GO:0021984
           "adenohypophysis development" evidence=ISO] [GO:0030324 "lung
           development" evidence=ISO] [GO:0030513 "positive regulation of BMP
           signaling pathway" evidence=ISO] [GO:0030901 "midbrain development"
           evidence=ISO] [GO:0031016 "pancreas development" evidence=ISO]
           [GO:0035019 "somatic stem cell maintenance" evidence=ISO]
           [GO:0035909 "aorta morphogenesis" evidence=ISO] [GO:0035910
           "ascending aorta morphogenesis" evidence=ISO] [GO:0042102 "positive
           regulation of T cell proliferation" evidence=ISO] [GO:0042491
           "auditory receptor cell differentiation" evidence=ISO] [GO:0042517
           "positive regulation of tyrosine phosphorylation of Stat3 protein"
           evidence=ISO;ISS] [GO:0042668 "auditory receptor cell fate
           determination" evidence=ISO] [GO:0042803 "protein homodimerization
           activity" evidence=ISO;ISS] [GO:0042826 "histone deacetylase
           binding" evidence=ISO] [GO:0043388 "positive regulation of DNA
           binding" evidence=ISO;ISS] [GO:0043565 "sequence-specific DNA
           binding" evidence=IDA] [GO:0045165 "cell fate commitment"
           evidence=ISO] [GO:0045596 "negative regulation of cell
           differentiation" evidence=ISO] [GO:0045598 "regulation of fat cell
           differentiation" evidence=ISO] [GO:0045608 "negative regulation of
           auditory receptor cell differentiation" evidence=ISO] [GO:0045665
           "negative regulation of neuron differentiation" evidence=ISO]
           [GO:0045747 "positive regulation of Notch signaling pathway"
           evidence=ISO] [GO:0045892 "negative regulation of transcription,
           DNA-dependent" evidence=ISO;IDA] [GO:0045893 "positive regulation of
           transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
           regulation of transcription from RNA polymerase II promoter"
           evidence=ISO] [GO:0045977 "positive regulation of mitotic cell
           cycle, embryonic" evidence=ISO] [GO:0046331 "lateral inhibition"
           evidence=ISO] [GO:0046427 "positive regulation of JAK-STAT cascade"
           evidence=ISO;ISS] [GO:0046983 "protein dimerization activity"
           evidence=IEA] [GO:0048469 "cell maturation" evidence=ISO]
           [GO:0048505 "regulation of timing of cell differentiation"
           evidence=ISO] [GO:0048538 "thymus development" evidence=ISO]
           [GO:0048667 "cell morphogenesis involved in neuron differentiation"
           evidence=ISO] [GO:0048711 "positive regulation of astrocyte
           differentiation" evidence=ISO;ISS] [GO:0048715 "negative regulation
           of oligodendrocyte differentiation" evidence=ISO;ISS] [GO:0048844
           "artery morphogenesis" evidence=ISO] [GO:0050767 "regulation of
           neurogenesis" evidence=ISO] [GO:0060037 "pharyngeal system
           development" evidence=ISO] [GO:0060164 "regulation of timing of
           neuron differentiation" evidence=ISO] [GO:0060253 "negative
           regulation of glial cell proliferation" evidence=ISO;ISS]
           [GO:0060412 "ventricular septum morphogenesis" evidence=ISO]
           [GO:0060716 "labyrinthine layer blood vessel development"
           evidence=ISO] [GO:0061009 "common bile duct development"
           evidence=ISO] [GO:0061106 "negative regulation of stomach
           neuroendocrine cell differentiation" evidence=ISO] [GO:0061309
           "cardiac neural crest cell development involved in outflow tract
           morphogenesis" evidence=ISO] [GO:0071820 "N-box binding"
           evidence=ISO;ISS] [GO:0090102 "cochlea development" evidence=ISO]
           [GO:0097084 "vascular smooth muscle cell development" evidence=ISO]
           [GO:0097150 "neuronal stem cell maintenance" evidence=ISO;IDA]
           [GO:2000227 "negative regulation of pancreatic A cell
           differentiation" evidence=ISO] [GO:2000737 "negative regulation of
           stem cell differentiation" evidence=ISO] [GO:2000974 "negative
           regulation of pro-B cell differentiation" evidence=ISO;ISS]
           [GO:2000978 "negative regulation of forebrain neuron
           differentiation" evidence=IDA] [GO:2000981 "negative regulation of
           inner ear receptor cell differentiation" evidence=ISO]
           InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
           PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 RGD:62081
           GO:GO:0042803 GO:GO:0005654 GO:GO:0006461 GO:GO:0001078
           GO:GO:0043565 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0042517
           InterPro:IPR018352 SMART:SM00511 GO:GO:0048711 GO:GO:0048715
           GO:GO:0043388 GO:GO:0097150 eggNOG:NOG319418 GO:GO:0007262
           GO:GO:0060253 GO:GO:0021861 KO:K06054 CTD:3280 HOVERGEN:HBG005960
           GO:GO:0071820 GO:GO:2000978 GO:GO:2000974 EMBL:D13417 EMBL:L04527
           EMBL:BC061730 IPI:IPI00188114 PIR:S36748 RefSeq:NP_077336.3
           UniGene:Rn.19727 ProteinModelPortal:Q04666 STRING:Q04666
           PhosphoSite:Q04666 GeneID:29577 KEGG:rno:29577 UCSC:RGD:62081
           NextBio:609674 Genevestigator:Q04666 Uniprot:Q04666
        Length = 281

 Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
 Identities = 38/89 (42%), Positives = 65/89 (73%)

Query:    15 KPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRR-QQSL 73
             KP++E++RRARIN  L +LK +++ +L+ +    SKLEKADILE+TV+HL  L+R Q + 
Sbjct:    39 KPIMEKRRRARINESLSQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQRAQMTA 98

Query:    74 GLTPEAAYADRFKAGFTHCAAEVSQYLAS 102
              L+ + +   +++AGF+ C  EV+++L++
Sbjct:    99 ALSTDPSVLGKYRAGFSECMNEVTRFLST 127


>UNIPROTKB|Q5PPM5 [details] [associations]
            symbol:hes1 "Transcription factor HES-1" species:8364
            "Xenopus (Silurana) tropicalis" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISS] [GO:0007219 "Notch signaling
            pathway" evidence=ISS] [GO:0043425 "bHLH transcription factor
            binding" evidence=ISS] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=ISS] [GO:0046982 "protein
            heterodimerization activity" evidence=ISS] [GO:0048635 "negative
            regulation of muscle organ development" evidence=ISS]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 GO:GO:0007275
            GO:GO:0005634 GO:GO:0003677 GO:GO:0007219 GO:GO:0006351
            GO:GO:0000122 GO:GO:0046982 Gene3D:4.10.280.10 SUPFAM:SSF47459
            InterPro:IPR018352 SMART:SM00511 GO:GO:0043425 eggNOG:NOG319418
            GeneTree:ENSGT00700000104168 KO:K06054 GO:GO:0048635 CTD:3280
            HOGENOM:HOG000236346 OrthoDB:EOG4TTGK6 EMBL:AC160833 EMBL:CR760467
            EMBL:BC087608 RefSeq:NP_001011194.1 UniGene:Str.10866
            ProteinModelPortal:Q5PPM5 STRING:Q5PPM5 Ensembl:ENSXETT00000036731
            GeneID:496617 KEGG:xtr:496617 Xenbase:XB-GENE-487995
            InParanoid:Q5PPM5 Bgee:Q5PPM5 Uniprot:Q5PPM5
        Length = 267

 Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
 Identities = 38/89 (42%), Positives = 65/89 (73%)

Query:    15 KPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRR-QQSL 73
             KP++E++RRARIN  L +LK +++ +L+ +    SKLEKADILE+TV+HL  L+R Q + 
Sbjct:    39 KPIMEKRRRARINESLGQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQRVQMTA 98

Query:    74 GLTPEAAYADRFKAGFTHCAAEVSQYLAS 102
              L+ + +   +++AGF+ C  EV+++L++
Sbjct:    99 ALSTDPSVLGKYRAGFSECMNEVTRFLST 127


>UNIPROTKB|Q8AVU4 [details] [associations]
            symbol:hes1-b "Transcription factor HES-1-B" species:8355
            "Xenopus laevis" [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISS] [GO:0007219 "Notch signaling pathway"
            evidence=ISS] [GO:0043425 "bHLH transcription factor binding"
            evidence=ISS] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0046982 "protein
            heterodimerization activity" evidence=ISS] [GO:0048635 "negative
            regulation of muscle organ development" evidence=ISS]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 GO:GO:0007275
            GO:GO:0005634 GO:GO:0003677 GO:GO:0007219 GO:GO:0006351
            GO:GO:0000122 GO:GO:0046982 Gene3D:4.10.280.10 SUPFAM:SSF47459
            InterPro:IPR018352 SMART:SM00511 GO:GO:0043425 KO:K06054
            GO:GO:0048635 EMBL:BC041261 EMBL:BC128932 RefSeq:NP_001079386.1
            UniGene:Xl.972 ProteinModelPortal:Q8AVU4 GeneID:379073
            KEGG:xla:379073 CTD:379073 Xenbase:XB-GENE-6256448 Uniprot:Q8AVU4
        Length = 267

 Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
 Identities = 38/89 (42%), Positives = 65/89 (73%)

Query:    15 KPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRR-QQSL 73
             KP++E++RRARIN  L +LK +++ +L+ +    SKLEKADILE+TV+HL  L+R Q + 
Sbjct:    39 KPIMEKRRRARINESLGQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNLQRVQMTA 98

Query:    74 GLTPEAAYADRFKAGFTHCAAEVSQYLAS 102
              L+ + +   +++AGF+ C  EV+++L++
Sbjct:    99 ALSTDPSVLGKYRAGFSECMNEVTRFLST 127


>UNIPROTKB|O57337 [details] [associations]
            symbol:HES1 "Transcription factor HES-1" species:9031
            "Gallus gallus" [GO:0046983 "protein dimerization activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 GO:GO:0005634 GO:GO:0006355
            GO:GO:0003677 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
            InterPro:IPR018352 SMART:SM00511 eggNOG:NOG319418 KO:K06054
            CTD:3280 HOGENOM:HOG000236346 HOVERGEN:HBG005960 EMBL:AF032966
            IPI:IPI00604360 RefSeq:NP_001005848.1 RefSeq:NP_989803.1
            UniGene:Gga.3754 ProteinModelPortal:O57337 STRING:O57337
            GeneID:395128 KEGG:gga:395128 NextBio:20815220 Uniprot:O57337
        Length = 290

 Score = 200 (75.5 bits), Expect = 4.7e-16, P = 4.7e-16
 Identities = 38/89 (42%), Positives = 64/89 (71%)

Query:    15 KPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRR-QQSL 73
             KP++E++RRARIN  L +LK +++ +L+ +    SKLEKADILE+TV+HL  L+R Q + 
Sbjct:    40 KPIMEKRRRARINESLGQLKMLILDALKKDSSRHSKLEKADILEMTVKHLRNLQRAQMAA 99

Query:    74 GLTPEAAYADRFKAGFTHCAAEVSQYLAS 102
              L+ + +   +++AGF  C  EV+++L++
Sbjct:   100 ALSADPSVLGKYRAGFNECMNEVTRFLST 128


>FB|FBgn0030899 [details] [associations]
            symbol:Her "HES-related" species:7227 "Drosophila
            melanogaster" [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISS] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0046983 "protein dimerization activity" evidence=IEA]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 GO:GO:0005634
            GO:GO:0006355 GO:GO:0003677 EMBL:AE014298 GO:GO:0006351
            Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00700000104130
            EMBL:BT022141 RefSeq:NP_525094.1 UniGene:Dm.27580 SMR:Q9VWX7
            IntAct:Q9VWX7 MINT:MINT-303044 EnsemblMetazoa:FBtr0074590
            GeneID:32800 KEGG:dme:Dmel_CG5927 UCSC:CG5927-RA CTD:32800
            FlyBase:FBgn0030899 eggNOG:NOG285685 InParanoid:Q9VWX7
            OrthoDB:EOG4JH9XZ GenomeRNAi:32800 NextBio:780468 Uniprot:Q9VWX7
        Length = 149

 Score = 196 (74.1 bits), Expect = 1.3e-15, P = 1.3e-15
 Identities = 47/110 (42%), Positives = 65/110 (59%)

Query:    10 YPEVMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRR 69
             Y EV KPM+ERKRR+RINRCLD +K+++      +GE ++K++  D+LEL V HL K   
Sbjct:    21 YREVFKPMMERKRRSRINRCLDFIKDLLQEVSHLDGETMAKMDMGDVLELAVHHLSKKNC 80

Query:    70 QQSLGLT-PEAA-YA---DRFKAGFTHCAAEVSQYLASSMQQHQQQPSTE 114
               +   T P +  Y    D + +GF  C  EVSQ+L    Q +  QPS E
Sbjct:    81 PVATPTTAPTSGVYQSPIDCYWSGFRECVLEVSQFL----QHNGYQPSFE 126


>ZFIN|ZDB-GENE-980526-144 [details] [associations]
            symbol:her6 "hairy-related 6" species:7955 "Danio
            rerio" [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0046983 "protein dimerization activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0001757
            "somite specification" evidence=IMP] [GO:0009952
            "anterior/posterior pattern specification" evidence=IMP]
            [GO:0007219 "Notch signaling pathway" evidence=IMP] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0021794 "thalamus development" evidence=IMP]
            [GO:0045664 "regulation of neuron differentiation" evidence=IMP]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353
            ZFIN:ZDB-GENE-980526-144 GO:GO:0005634 GO:GO:0045664 GO:GO:0006355
            GO:GO:0003677 GO:GO:0007219 GO:GO:0006351 Gene3D:4.10.280.10
            SUPFAM:SSF47459 InterPro:IPR018352 SMART:SM00511 GO:GO:0021794
            GO:GO:0001757 KO:K06054 HOGENOM:HOG000236346 HOVERGEN:HBG005960
            EMBL:X97333 IPI:IPI00511507 RefSeq:NP_571154.1 UniGene:Dr.75065
            ProteinModelPortal:Q90468 STRING:Q90468 GeneID:30288 KEGG:dre:30288
            CTD:30288 InParanoid:Q90468 NextBio:20806731 ArrayExpress:Q90468
            Uniprot:Q90468
        Length = 334

 Score = 198 (74.8 bits), Expect = 1.5e-15, P = 1.5e-15
 Identities = 37/89 (41%), Positives = 63/89 (70%)

Query:    15 KPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRR-QQSL 73
             KP++E++RRARIN  L +LK +++ +L+ +    SKLEKADILE+TV+HL  ++R Q + 
Sbjct:   103 KPIMEKRRRARINESLGQLKTLILDALKKDSSRHSKLEKADILEMTVKHLRNMQRAQMTA 162

Query:    74 GLTPEAAYADRFKAGFTHCAAEVSQYLAS 102
              L  +     +++AGF+ C  EV+++L++
Sbjct:   163 ALNTDPTVLGKYRAGFSECMNEVTRFLST 191


>ZFIN|ZDB-GENE-980526-204 [details] [associations]
            symbol:her3 "hairy-related 3" species:7955 "Danio
            rerio" [GO:0003677 "DNA binding" evidence=IEA;IDA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0046983 "protein dimerization activity" evidence=IEA]
            [GO:0050768 "negative regulation of neurogenesis" evidence=IMP]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=IDA]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353
            ZFIN:ZDB-GENE-980526-204 GO:GO:0005634 GO:GO:0045892 GO:GO:0003677
            GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0050768
            InterPro:IPR018352 SMART:SM00511 eggNOG:NOG272757 OrthoDB:EOG4PVP15
            EMBL:BC092924 IPI:IPI00505890 UniGene:Dr.75064 STRING:Q568C3
            HOVERGEN:HBG098268 InParanoid:Q568C3 ArrayExpress:Q568C3
            Uniprot:Q568C3
        Length = 253

 Score = 184 (69.8 bits), Expect = 2.3e-14, P = 2.3e-14
 Identities = 41/92 (44%), Positives = 62/92 (67%)

Query:    12 EVMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRRQQ 71
             +V KP++E+KRRARIN+CL++LK ++ ++  +      KLEKADILELTV+HL  L+  +
Sbjct:    42 KVSKPLMEKKRRARINKCLNQLKSLLESAC-SNNIRKRKLEKADILELTVKHLRHLQNTK 100

Query:    72 SLGLTPEAAYADRFKAGFTHCAAEVSQYLASS 103
               GL+ +A  +  + AG+  C   VS YL +S
Sbjct:   101 R-GLS-KACDSAEYHAGYRSCLNTVSHYLRAS 130


>FB|FBgn0027788 [details] [associations]
            symbol:Hey "Hairy/E(spl)-related with YRPW motif"
            species:7227 "Drosophila melanogaster" [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0046983 "protein dimerization activity" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=ISS] [GO:0045746 "negative
            regulation of Notch signaling pathway" evidence=ISS]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 EMBL:AE013599
            GO:GO:0007275 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
            GO:GO:0007219 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
            InterPro:IPR018352 SMART:SM00511 GO:GO:0045746
            GeneTree:ENSGT00700000104130 eggNOG:NOG241271 KO:K09091
            EMBL:AF151523 EMBL:BT029144 RefSeq:NP_523657.1 UniGene:Dm.516
            ProteinModelPortal:Q7KM13 SMR:Q7KM13 IntAct:Q7KM13 STRING:Q7KM13
            PRIDE:Q7KM13 EnsemblMetazoa:FBtr0088869 GeneID:35764
            KEGG:dme:Dmel_CG11194 CTD:100188776 FlyBase:FBgn0027788
            InParanoid:Q7KM13 OMA:TIEGMDI OrthoDB:EOG4MPG67 PhylomeDB:Q7KM13
            GenomeRNAi:35764 NextBio:795108 Bgee:Q7KM13 Uniprot:Q7KM13
        Length = 425

 Score = 171 (65.3 bits), Expect = 3.3e-14, Sum P(2) = 3.3e-14
 Identities = 41/109 (37%), Positives = 64/109 (58%)

Query:     5 SIEVVYPEVMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHL 64
             S +++  +  + ++E+KRR RIN  L ELK ++ ++ + +G   +KLEKA+IL+LTV HL
Sbjct:    95 SCQLMSRKKRRGVIEKKRRDRINSSLTELKRLVPSAYEKQGS--AKLEKAEILQLTVEHL 152

Query:    65 HKLRRQ--QSLGLTPEAAYADRFKAGFTHCAAEVSQYLASSMQQHQQQP 111
               L+ +   SL   P+    D    GF  CAAEV++YL +      Q P
Sbjct:   153 KSLQSKTLDSLSYDPQRVAMDYHIIGFRECAAEVARYLVTIEGMDIQDP 201

 Score = 39 (18.8 bits), Expect = 3.3e-14, Sum P(2) = 3.3e-14
 Identities = 9/17 (52%), Positives = 11/17 (64%)

Query:   105 QQHQQQPS-TEPTIDPS 120
             QQHQQQ   T+ T  P+
Sbjct:   327 QQHQQQQQRTQTTPQPT 343


>ZFIN|ZDB-GENE-030131-2376 [details] [associations]
            symbol:her8a "hairy-related 8a" species:7955
            "Danio rerio" [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
            activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0050768 "negative regulation of neurogenesis" evidence=IMP]
            [GO:0042063 "gliogenesis" evidence=IMP] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010
            Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353
            ZFIN:ZDB-GENE-030131-2376 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
            GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0042063
            GO:GO:0050768 GeneTree:ENSGT00700000104130 EMBL:CR848737
            IPI:IPI00487719 Ensembl:ENSDART00000123395 ArrayExpress:F1QI81
            Uniprot:F1QI81
        Length = 253

 Score = 163 (62.4 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
 Identities = 38/95 (40%), Positives = 57/95 (60%)

Query:    12 EVMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRRQQ 71
             ++ KP++E+KRR RIN  L++LK IMV +   +    SKLEKAD+LE+TV+H+  L+R  
Sbjct:    53 KLRKPLIEKKRRERINSSLEQLKGIMVDAYNLDQ---SKLEKADVLEITVQHMENLQRGH 109

Query:    72 SLG--LTPEAAYADR--FKAGFTHCAAEVSQYLAS 102
               G   +P   +  R  + +G+  C  EV   L S
Sbjct:   110 GQGGSNSPGTGFESRQRYSSGYIQCMHEVHNLLLS 144

 Score = 32 (16.3 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
 Identities = 8/21 (38%), Positives = 10/21 (47%)

Query:   100 LASSMQQHQQQPSTEPTIDPS 120
             L SS+Q H    S  P   P+
Sbjct:   194 LPSSLQPHALLLSPSPPSSPT 214


>UNIPROTKB|E1C412 [details] [associations]
            symbol:HES6 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
            "protein dimerization activity" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0003712 "transcription cofactor activity"
            evidence=IEA] [GO:0005667 "transcription factor complex"
            evidence=IEA] [GO:0006357 "regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0007399 "nervous system
            development" evidence=IEA] [GO:0030154 "cell differentiation"
            evidence=IEA] InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010
            Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353
            GO:GO:0030154 GO:GO:0003677 GO:GO:0003700 GO:GO:0006357
            GO:GO:0006351 GO:GO:0005667 GO:GO:0003712 Gene3D:4.10.280.10
            SUPFAM:SSF47459 GeneTree:ENSGT00700000104130 KO:K09087 CTD:55502
            EMBL:AADN02024211 IPI:IPI00595723 RefSeq:XP_422641.3
            UniGene:Gga.2703 Ensembl:ENSGALT00000008864 GeneID:424829
            KEGG:gga:424829 ArrayExpress:E1C412 Uniprot:E1C412
        Length = 227

 Score = 174 (66.3 bits), Expect = 2.7e-13, P = 2.7e-13
 Identities = 38/90 (42%), Positives = 55/90 (61%)

Query:    12 EVMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRRQQ 71
             ++ KP++ERKRR RIN CLD+LKE +V +   +    SKLEKADILE+TV+HL  ++  +
Sbjct:    21 KLRKPLIERKRRERINNCLDQLKETVVGAFHLDQ---SKLEKADILEMTVKHLQNIQNSK 77

Query:    72 SLGLTPEAAYAD-RFKAGFTHCAAEVSQYL 100
              +  +     A  R+  G+  C  EV   L
Sbjct:    78 LMADSKVGLEAQQRYSTGYIQCMHEVHNLL 107


>UNIPROTKB|F1N0L3 [details] [associations]
            symbol:HES2 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0046983
            "protein dimerization activity" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] InterPro:IPR003650 InterPro:IPR011598
            Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054
            SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
            GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR018352
            SMART:SM00511 GeneTree:ENSGT00700000104168 CTD:54626 KO:K09087
            OMA:EGYSACV EMBL:DAAA02043087 IPI:IPI01000073 RefSeq:NP_001185934.1
            UniGene:Bt.36457 Ensembl:ENSBTAT00000028261 GeneID:516433
            KEGG:bta:516433 NextBio:20872221 Uniprot:F1N0L3
        Length = 165

 Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
 Identities = 38/87 (43%), Positives = 55/87 (63%)

Query:    14 MKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRRQQSL 73
             +KP+LE++RRARIN  L +LK +++  L  E    SKLEKADILE+TVR L +L    S 
Sbjct:    17 LKPLLEKRRRARINESLSQLKGLILPLLGRESSRYSKLEKADILEMTVRFLQEL--PASS 74

Query:    74 GLTPEAAYADRFKAGFTHCAAEVSQYL 100
             G T     +D ++ G+  C A +++ L
Sbjct:    75 GPTAAPTPSDSYREGYRACLARLARVL 101


>UNIPROTKB|Q9Y543 [details] [associations]
            symbol:HES2 "Transcription factor HES-2" species:9606 "Homo
            sapiens" [GO:0046983 "protein dimerization activity" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0003690 "double-stranded DNA binding" evidence=IEA] [GO:0045892
            "negative regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0008134 "transcription
            factor binding" evidence=NAS] InterPro:IPR003650 InterPro:IPR011598
            Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054
            SMART:SM00353 GO:GO:0005634 GO:GO:0045892 EMBL:CH471130
            GO:GO:0006351 GO:GO:0003690 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GO:GO:0008134 EMBL:AL031848 InterPro:IPR018352 SMART:SM00511
            HOGENOM:HOG000236346 HOVERGEN:HBG005960 EMBL:AK091122 EMBL:BC012091
            EMBL:BC132698 EMBL:BC136963 EMBL:BC142687 IPI:IPI00001055
            IPI:IPI00061562 RefSeq:NP_061962.2 UniGene:Hs.118727
            ProteinModelPortal:Q9Y543 SMR:Q9Y543 STRING:Q9Y543
            PhosphoSite:Q9Y543 DMDM:12643954 PRIDE:Q9Y543
            Ensembl:ENST00000377834 Ensembl:ENST00000377836
            Ensembl:ENST00000377837 GeneID:54626 KEGG:hsa:54626 UCSC:uc001amw.3
            UCSC:uc001amx.3 CTD:54626 GeneCards:GC01M006406 HGNC:HGNC:16005
            HPA:HPA039462 MIM:609970 neXtProt:NX_Q9Y543 PharmGKB:PA134958805
            eggNOG:NOG259850 InParanoid:Q9Y543 KO:K09087 OMA:EGYSACV
            PhylomeDB:Q9Y543 GenomeRNAi:54626 NextBio:57166 ArrayExpress:Q9Y543
            Bgee:Q9Y543 CleanEx:HS_HES2 Genevestigator:Q9Y543
            GermOnline:ENSG00000069812 Uniprot:Q9Y543
        Length = 173

 Score = 170 (64.9 bits), Expect = 7.1e-13, P = 7.1e-13
 Identities = 37/87 (42%), Positives = 56/87 (64%)

Query:    14 MKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRRQQSL 73
             +KP+LE++RRARIN+ L +LK +++  L  E  N SKLEKAD+LE+TVR L +L    S 
Sbjct:    17 LKPLLEKRRRARINQSLSQLKGLILPLLGRENSNCSKLEKADVLEMTVRFLQEL--PASS 74

Query:    74 GLTPEAAYADRFKAGFTHCAAEVSQYL 100
               T      D ++ G++ C A +++ L
Sbjct:    75 WPTAAPLPCDSYREGYSACVARLARVL 101


>UNIPROTKB|E1C2Y3 [details] [associations]
            symbol:HES6 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
            "protein dimerization activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] InterPro:IPR003650 InterPro:IPR011598
            Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054
            SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
            GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GeneTree:ENSGT00700000104130 EMBL:AADN02024211 IPI:IPI00819473
            Ensembl:ENSGALT00000040988 OMA:SINIRRR ArrayExpress:E1C2Y3
            Uniprot:E1C2Y3
        Length = 182

 Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
 Identities = 37/92 (40%), Positives = 54/92 (58%)

Query:    12 EVMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRRQQ 71
             ++ KP++ERKRR RIN CLD+LKE +V +   +    SKLEKADILE+TV+HL  ++  +
Sbjct:    21 KLRKPLIERKRRERINNCLDQLKETVVGAFHLD----SKLEKADILEMTVKHLQNIQNSK 76

Query:    72 SLGLTPEAAYAD---RFKAGFTHCAAEVSQYL 100
              +         +   R+  G+  C  EV   L
Sbjct:    77 LMDTADSKVGLEAQQRYSTGYIQCMHEVHNLL 108


>ZFIN|ZDB-GENE-060815-4 [details] [associations]
            symbol:her8.2 "hairy-related 8.2" species:7955 "Danio
            rerio" [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0046983 "protein dimerization activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010
            Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353
            ZFIN:ZDB-GENE-060815-4 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
            GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG241578
            HOGENOM:HOG000236346 HOVERGEN:HBG107098 OrthoDB:EOG4G7C0H
            EMBL:BC117621 IPI:IPI00952513 UniGene:Dr.86703 InParanoid:Q1ECY5
            Uniprot:Q1ECY5
        Length = 223

 Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
 Identities = 37/91 (40%), Positives = 53/91 (58%)

Query:    12 EVMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRRQQ 71
             ++ KP++ERKRR RIN CLD+L+E +V   + +    SKLEKADILE+TV+HL  ++  +
Sbjct:    36 KLRKPLIERKRRERINLCLDQLRETVVGVFKPDQ---SKLEKADILEMTVKHLQNIQSSR 92

Query:    72 SLGLTPEAAYADRFKAGFTHCAAEVSQYLAS 102
                         R+  G+  C  EV   L S
Sbjct:    93 VSDPVLNTGARQRYSTGYIQCMQEVHNLLHS 123


>UNIPROTKB|F1RIL7 [details] [associations]
            symbol:HES2 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0046983
            "protein dimerization activity" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] InterPro:IPR003650 InterPro:IPR011598
            Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054
            SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
            GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR018352
            SMART:SM00511 GeneTree:ENSGT00700000104168 KO:K09087 OMA:EGYSACV
            EMBL:FP102449 RefSeq:XP_003127577.1 Ensembl:ENSSSCT00000003743
            GeneID:100515666 KEGG:ssc:100515666 Uniprot:F1RIL7
        Length = 165

 Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
 Identities = 36/87 (41%), Positives = 55/87 (63%)

Query:    14 MKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRRQQSL 73
             +KP+LE++RRARIN  L +LK +++  L  E  + SKLEKADILE+TVR L +L      
Sbjct:    17 LKPLLEKRRRARINASLSQLKGLILPLLGRESSHYSKLEKADILEMTVRFLQELPASSCP 76

Query:    74 GLTPEAAYADRFKAGFTHCAAEVSQYL 100
                P ++  D ++ G+  C A +++ L
Sbjct:    77 TAAPTSS--DSYREGYRACLARLARVL 101


>FB|FBgn0000591 [details] [associations]
            symbol:E(spl)m8-HLH "Enhancer of split m8, helix-loop-helix"
            species:7227 "Drosophila melanogaster" [GO:0007398 "ectoderm
            development" evidence=TAS] [GO:0007498 "mesoderm development"
            evidence=IMP] [GO:0001078 "RNA polymerase II core promoter proximal
            region sequence-specific DNA binding transcription factor activity
            involved in negative regulation of transcription" evidence=IDA]
            [GO:0046982 "protein heterodimerization activity" evidence=IPI]
            [GO:0042803 "protein homodimerization activity" evidence=IPI]
            [GO:0008587 "imaginal disc-derived wing margin morphogenesis"
            evidence=NAS] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=ISS;NAS] [GO:0043565
            "sequence-specific DNA binding" evidence=IDA] [GO:0003677 "DNA
            binding" evidence=NAS] [GO:0005634 "nucleus" evidence=NAS]
            [GO:0045165 "cell fate commitment" evidence=NAS] [GO:0048749
            "compound eye development" evidence=IMP;TAS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=TAS] [GO:0007422 "peripheral nervous system development"
            evidence=TAS] [GO:0007173 "epidermal growth factor receptor
            signaling pathway" evidence=NAS] [GO:0007219 "Notch signaling
            pathway" evidence=NAS] [GO:0045468 "regulation of R8 cell spacing
            in compound eye" evidence=NAS] [GO:0010629 "negative regulation of
            gene expression" evidence=IMP] [GO:0016360 "sensory organ precursor
            cell fate determination" evidence=IMP] [GO:0048813 "dendrite
            morphogenesis" evidence=IMP] [GO:0048666 "neuron development"
            evidence=IMP] InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010
            Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353
            EMBL:AE014297 GO:GO:0005634 GO:GO:0007173 GO:GO:0007498
            GO:GO:0001078 GO:GO:0043565 GO:GO:0007219 GO:GO:0007422
            GO:GO:0048813 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0007398
            GO:GO:0016360 GO:GO:0008587 InterPro:IPR018352 SMART:SM00511
            GO:GO:0045468 GeneTree:ENSGT00700000104130 KO:K09090 EMBL:AY779906
            EMBL:AY779907 EMBL:AY779908 EMBL:AY779909 EMBL:AY779910
            EMBL:AY779911 EMBL:AY779912 EMBL:AY779913 EMBL:AY779914
            EMBL:AY779915 EMBL:AY779916 EMBL:AY779917 EMBL:AY779918
            EMBL:AY779919 EMBL:AY779920 EMBL:AY779921 EMBL:X16553 EMBL:BT028829
            EMBL:BT028834 EMBL:BT028861 EMBL:BT028867 EMBL:DQ138662 PIR:S03627
            RefSeq:NP_524513.1 UniGene:Dm.27416 ProteinModelPortal:P13098
            SMR:P13098 DIP:DIP-22511N IntAct:P13098 MINT:MINT-188618
            STRING:P13098 PRIDE:P13098 EnsemblMetazoa:FBtr0084961 GeneID:43161
            KEGG:dme:Dmel_CG8365 CTD:43161 FlyBase:FBgn0000591 eggNOG:NOG283775
            InParanoid:Q5S474 OMA:YMNAVNE OrthoDB:EOG473N7H PhylomeDB:P13098
            GenomeRNAi:43161 NextBio:832482 Bgee:P13098 GermOnline:CG8365
            Uniprot:P13098
        Length = 179

 Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
 Identities = 34/95 (35%), Positives = 61/95 (64%)

Query:     9 VYPEVMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLR 68
             +Y +V KPMLER+RRAR+N+CLD LK + V  L+ + + + +++KA++LE  V  + + +
Sbjct:     9 IYQKVKKPMLERQRRARMNKCLDNLKTL-VAELRGD-DGILRMDKAEMLESAVIFMRQQK 66

Query:    69 RQQSLGLTPEAAYADRFKAGFTHCAAEVSQYLASS 103
               + +    ++   D FK G+ +   EVS+ +AS+
Sbjct:    67 TPKKVAQEEQSLPLDSFKNGYMNAVNEVSRVMAST 101


>UNIPROTKB|Q00P32 [details] [associations]
            symbol:hes2 "Transcription factor HES-2" species:8355
            "Xenopus laevis" [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IMP] [GO:0005634
            "nucleus" evidence=ISS] [GO:0014015 "positive regulation of
            gliogenesis" evidence=IMP] [GO:0042803 "protein homodimerization
            activity" evidence=IPI] [GO:0043425 "bHLH transcription factor
            binding" evidence=IPI] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=IMP] [GO:0046982 "protein
            heterodimerization activity" evidence=IPI] [GO:0050768 "negative
            regulation of neurogenesis" evidence=IMP] [GO:0060042 "retina
            morphogenesis in camera-type eye" evidence=IMP] InterPro:IPR011598
            Pfam:PF00010 PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353
            GO:GO:0005634 GO:GO:0003677 GO:GO:0006351 GO:GO:0000122
            Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0050768 CTD:54626
            KO:K09087 EMBL:DQ156231 EMBL:BC084134 EMBL:BC092348
            RefSeq:NP_001116354.1 UniGene:Xl.49528 GeneID:495039
            KEGG:xla:495039 Xenbase:XB-GENE-865581 GO:GO:0014015 GO:GO:0060042
            Uniprot:Q00P32
        Length = 191

 Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
 Identities = 36/92 (39%), Positives = 55/92 (59%)

Query:    12 EVMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRRQQ 71
             + +KP++E++RRARIN  L++LK +++  +  +    SKLEKADILE+TVR L  +   Q
Sbjct:    30 KTLKPLMEKRRRARINESLNQLKTLILPLIGKDNSRYSKLEKADILEMTVRFLRDIPPVQ 89

Query:    72 SLGLTPEAAYADRFKAGFTHCAAEVSQYLASS 103
             +         ADR+K G+  C   +S  L  S
Sbjct:    90 AQN------QADRYKEGYRACVERLSAILGKS 115


>RGD|62082 [details] [associations]
            symbol:Hes2 "hairy and enhancer of split 2 (Drosophila)"
           species:10116 "Rattus norvegicus" [GO:0003690 "double-stranded DNA
           binding" evidence=IDA] [GO:0005634 "nucleus" evidence=TAS]
           [GO:0006351 "transcription, DNA-dependent" evidence=IEA] [GO:0006355
           "regulation of transcription, DNA-dependent" evidence=TAS]
           [GO:0045892 "negative regulation of transcription, DNA-dependent"
           evidence=IDA] [GO:0046983 "protein dimerization activity"
           evidence=IEA] InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010
           Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 RGD:62082
           GO:GO:0005634 GO:GO:0045892 GO:GO:0006351 GO:GO:0003690
           Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR018352 SMART:SM00511
           GeneTree:ENSGT00700000104168 HOGENOM:HOG000236346 HOVERGEN:HBG005960
           CTD:54626 eggNOG:NOG259850 KO:K09087 OMA:EGYSACV OrthoDB:EOG4KPTC7
           EMBL:D14029 IPI:IPI00198610 PIR:S35037 RefSeq:NP_062109.1
           UniGene:Rn.44655 ProteinModelPortal:P35429 STRING:P35429
           Ensembl:ENSRNOT00000014035 GeneID:29567 KEGG:rno:29567
           UCSC:RGD:62082 InParanoid:P35429 NextBio:609640
           Genevestigator:P35429 GermOnline:ENSRNOG00000010490 Uniprot:P35429
        Length = 157

 Score = 161 (61.7 bits), Expect = 6.4e-12, P = 6.4e-12
 Identities = 37/87 (42%), Positives = 54/87 (62%)

Query:    14 MKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRRQQSL 73
             +KP+LE++RRARIN  L +LK +++  L AE    SKLEKADILE+TVR L +  +  S+
Sbjct:    17 LKPLLEKRRRARINESLSQLKGLVLPLLGAETSRYSKLEKADILEMTVRFLRE--QPASV 74

Query:    74 GLTPEAAYADRFKAGFTHCAAEVSQYL 100
               T      D +  G+  C A +++ L
Sbjct:    75 CSTEAPGSLDSYLEGYRACLARLARVL 101


>ZFIN|ZDB-GENE-030131-7074 [details] [associations]
            symbol:heyl "hairy/enhancer-of-split related with
            YRPW motif-like" species:7955 "Danio rerio" [GO:0046983 "protein
            dimerization activity" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0007219 "Notch signaling pathway" evidence=IEA]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353
            ZFIN:ZDB-GENE-030131-7074 GO:GO:0007275 GO:GO:0005634 GO:GO:0006355
            GO:GO:0003677 GO:GO:0007219 GO:GO:0006351 Gene3D:4.10.280.10
            SUPFAM:SSF47459 InterPro:IPR018352 SMART:SM00511
            GeneTree:ENSGT00700000104130 HOGENOM:HOG000286035
            HOVERGEN:HBG003275 KO:K09091 CTD:26508 eggNOG:NOG310123
            OrthoDB:EOG4P8FJZ EMBL:AJ510222 EMBL:CR318628 IPI:IPI00837045
            RefSeq:NP_859425.1 UniGene:Dr.82032 ProteinModelPortal:Q8AXV5
            SMR:Q8AXV5 STRING:Q8AXV5 Ensembl:ENSDART00000078197 GeneID:335134
            KEGG:dre:335134 InParanoid:Q8AXV5 OMA:FRECVGE NextBio:20810685
            Bgee:Q8AXV5 Uniprot:Q8AXV5
        Length = 310

 Score = 148 (57.2 bits), Expect = 8.7e-12, Sum P(2) = 8.7e-12
 Identities = 34/87 (39%), Positives = 52/87 (59%)

Query:    17 MLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRRQQSLGLT 76
             ++E++RR RIN  L EL+ ++ ++ + +G   SKLEKA+IL++TV HL  L      G  
Sbjct:    50 IIEKRRRDRINHSLSELRRLVPSAFEKQGS--SKLEKAEILQMTVDHLKLLHAMGGKGYF 107

Query:    77 PEAAYADRFKA-GFTHCAAEVSQYLAS 102
                A A  ++  GF  C  EV +YL+S
Sbjct:   108 DARALAVDYRTLGFRECVGEVVRYLSS 134

 Score = 34 (17.0 bits), Expect = 8.7e-12, Sum P(2) = 8.7e-12
 Identities = 7/18 (38%), Positives = 10/18 (55%)

Query:   104 MQQHQQQPSTEPTIDPSS 121
             +QQH  +  T P+   SS
Sbjct:   250 LQQHSPEGRTVPSSSSSS 267


>FB|FBgn0032741 [details] [associations]
            symbol:Side "similar to Deadpan" species:7227 "Drosophila
            melanogaster" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
            "nucleus" evidence=IC] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=ISS] [GO:0046983 "protein dimerization activity"
            evidence=IEA] InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010
            Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353
            GO:GO:0005634 EMBL:AE014134 GO:GO:0006355 GO:GO:0003677
            GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GeneTree:ENSGT00700000104130 EMBL:AY060791 RefSeq:NP_523599.1
            UniGene:Dm.2592 SMR:Q9VJ16 IntAct:Q9VJ16 STRING:Q9VJ16
            EnsemblMetazoa:FBtr0081141 GeneID:35168 KEGG:dme:Dmel_CG10446
            UCSC:CG10446-RA CTD:35168 FlyBase:FBgn0032741 eggNOG:NOG287577
            InParanoid:Q9VJ16 OMA:EIDVEIC OrthoDB:EOG4GHX5R GenomeRNAi:35168
            NextBio:792196 Uniprot:Q9VJ16
        Length = 507

 Score = 168 (64.2 bits), Expect = 9.7e-12, P = 9.7e-12
 Identities = 48/116 (41%), Positives = 73/116 (62%)

Query:    15 KPMLERKRRARINRCLDELKEIMVTSLQAE----GENVSK---LEKADILELTVRHLHKL 67
             KP++E++RRARIN+ L  LK +++ S + +    GE  +K   LEKADILELTVRH    
Sbjct:    55 KPLMEKRRRARINQSLAILKALILESTKTQNAKNGEGQAKHTKLEKADILELTVRHF--- 111

Query:    68 RRQQSLGLTPEAAYADRFKAGFTHCAAEVSQYLASSMQQHQQQP-STEPTI-DPSS 121
             +R ++L   P     ++++AG+T CA EV++YLA+     +  P  T PT+ +P S
Sbjct:   112 QRHRNLD-DPTV---NKYRAGYTDCAREVARYLATP----EPPPMGTMPTLAEPGS 159


>UNIPROTKB|E2R0N6 [details] [associations]
            symbol:HES2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0046983 "protein dimerization activity" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 GO:GO:0005634 GO:GO:0006355
            GO:GO:0003677 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GeneTree:ENSGT00700000104168 EMBL:AAEX03003901 EMBL:AAEX03003895
            EMBL:AAEX03003896 EMBL:AAEX03003897 EMBL:AAEX03003898
            EMBL:AAEX03003899 EMBL:AAEX03003900 Ensembl:ENSCAFT00000031121
            OMA:ELPASAC Uniprot:E2R0N6
        Length = 173

 Score = 159 (61.0 bits), Expect = 1.0e-11, P = 1.0e-11
 Identities = 37/87 (42%), Positives = 54/87 (62%)

Query:    14 MKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRRQQSL 73
             +KP+LE++RRARIN  L +LK +++  L  E  + SKLEKADILE+TVR L +L      
Sbjct:    17 LKPLLEKRRRARINASLRQLKGLILPLLGRESSHYSKLEKADILEMTVRFLRELPASYRA 76

Query:    74 GLTPEAAYADRFKAGFTHCAAEVSQYL 100
               T   A +D +  G+  C A +++ L
Sbjct:    77 ARTQ--APSDGYGEGYRACLARLARVL 101


>ZFIN|ZDB-GENE-081104-104 [details] [associations]
            symbol:hes2.1 "hairy and enhancer of split 2.1"
            species:7955 "Danio rerio" [GO:0046983 "protein dimerization
            activity" evidence=IEA] InterPro:IPR011598 Pfam:PF00010
            PROSITE:PS50888 SMART:SM00353 ZFIN:ZDB-GENE-081104-104
            Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00700000104168
            EMBL:CR954167 IPI:IPI00890411 Ensembl:ENSDART00000111075
            Uniprot:E7F1P6
        Length = 195

 Score = 159 (61.0 bits), Expect = 1.0e-11, P = 1.0e-11
 Identities = 38/101 (37%), Positives = 57/101 (56%)

Query:    12 EVMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRRQQ 71
             + +KP++E++RRARIN  L+ LK +++  +  +    SKLEKADILE+TVR L  L    
Sbjct:    31 KTLKPLMEKRRRARINDSLNHLKTLILPLVGKDASRYSKLEKADILEMTVRFLRDLPSSS 90

Query:    72 SLGLTPEAAYADRFKAGFTHCAAEVSQYLASS---MQQHQQ 109
             + G T      D +K G+  C   +S  L  S    + HQ+
Sbjct:    91 AKGQT------DSYKEGYKACLQRISTMLPQSNLETEAHQR 125


>UNIPROTKB|J9P9B3 [details] [associations]
            symbol:HEY2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0046983 "protein dimerization activity" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 GO:GO:0005634 GO:GO:0006355
            GO:GO:0003677 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
            InterPro:IPR018352 SMART:SM00511 GeneTree:ENSGT00700000104130
            EMBL:AAEX03000421 Ensembl:ENSCAFT00000044703 OMA:FRECTAE
            Uniprot:J9P9B3
        Length = 149

 Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
 Identities = 36/101 (35%), Positives = 60/101 (59%)

Query:     3 TLSIEVVYPEVMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVR 62
             T + +++  +  + ++E++RR RIN  L EL+ ++ T+ + +G   +KLEKA+IL++TV 
Sbjct:    16 TTTSQIMARKKRRGIIEKRRRDRINNSLSELRRLVPTAFEKQGS--AKLEKAEILQMTVD 73

Query:    63 HLHKLRRQQSLGLTPEAAYA-DRFKAGFTHCAAEVSQYLAS 102
             HL  L+     G     A A D    GF  C  EV++YL+S
Sbjct:    74 HLKMLQATGGKGYFDAHALALDFMSIGFRECLGEVARYLSS 114


>ZFIN|ZDB-GENE-060825-55 [details] [associations]
            symbol:hes2.2 "hairy and enhancer of split 2.2"
            species:7955 "Danio rerio" [GO:0046983 "protein dimerization
            activity" evidence=IEA] InterPro:IPR011598 Pfam:PF00010
            PROSITE:PS50888 SMART:SM00353 ZFIN:ZDB-GENE-060825-55
            Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00700000104168
            HOGENOM:HOG000236346 HOVERGEN:HBG005960 eggNOG:NOG259850
            EMBL:CR954167 IPI:IPI00786709 UniGene:Dr.88661
            Ensembl:ENSDART00000138125 OMA:PNITASE OrthoDB:EOG4RJG33
            Uniprot:B0V2G5
        Length = 191

 Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
 Identities = 39/89 (43%), Positives = 51/89 (57%)

Query:    12 EVMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRRQQ 71
             + +KP+LE+KRRARIN  LD LK +++     +    SKLEKADILE+TVR L  ++   
Sbjct:    29 KTLKPLLEKKRRARINDSLDRLKALILPLTGKDNCRYSKLEKADILEMTVRFLTDIQT-- 86

Query:    72 SLGLTPEAAYADRFKAGFTHCAAEVSQYL 100
                 TP    A  F  G+T C   VS  L
Sbjct:    87 ----TPSKDTAVSFTEGYTTCLQRVSARL 111


>ZFIN|ZDB-GENE-000427-6 [details] [associations]
            symbol:her7 "hairy and enhancer of split related-7"
            species:7955 "Danio rerio" [GO:0046983 "protein dimerization
            activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0001756 "somitogenesis" evidence=IGI;IMP]
            [GO:0001757 "somite specification" evidence=IMP] [GO:0005634
            "nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IGI] InterPro:IPR003650 InterPro:IPR011598
            Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054
            SMART:SM00353 ZFIN:ZDB-GENE-000427-6 GO:GO:0005634 GO:GO:0006355
            GO:GO:0003677 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GO:GO:0001757 EMBL:AF240772 EMBL:BC163871 EMBL:BC163885
            IPI:IPI00507597 RefSeq:NP_571684.1 UniGene:Dr.77721 STRING:Q9I9K1
            GeneID:58132 KEGG:dre:58132 CTD:58132 HOVERGEN:HBG076999
            InParanoid:Q9I9K1 NextBio:20892383 Uniprot:Q9I9K1
        Length = 206

 Score = 134 (52.2 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
 Identities = 30/89 (33%), Positives = 49/89 (55%)

Query:    12 EVMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRRQQ 71
             +++KP +ER+RR R+NR L+ LK +++   +    N  +LEKA+ILE TV  L K     
Sbjct:    15 KLLKPQVERRRRERMNRSLENLKLLLLQGPEHNQPNQRRLEKAEILEYTVLFLQKANEAS 74

Query:    72 SLGLTPEAAYADRFKAGFTHCAAEVSQYL 100
                   E     +F  GF+ C  + +++L
Sbjct:    75 K---EEEGEEKSQFMEGFSSCLQKAARFL 100

 Score = 33 (16.7 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
 Identities = 6/20 (30%), Positives = 12/20 (60%)

Query:    98 QYLASSMQQHQQQPSTEPTI 117
             Q+  S+ Q H ++P  + T+
Sbjct:   134 QHAESNPQHHARRPHHKNTV 153


>MGI|MGI:2135679 [details] [associations]
            symbol:Hes7 "hairy and enhancer of split 7 (Drosophila)"
            species:10090 "Mus musculus" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IDA]
            [GO:0001501 "skeletal system development" evidence=IMP] [GO:0001756
            "somitogenesis" evidence=IMP] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0007219 "Notch signaling pathway" evidence=IDA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0008134
            "transcription factor binding" evidence=NAS] [GO:0036342 "post-anal
            tail morphogenesis" evidence=IMP] [GO:0045892 "negative regulation
            of transcription, DNA-dependent" evidence=IDA] [GO:0046983 "protein
            dimerization activity" evidence=IEA] [GO:0048511 "rhythmic process"
            evidence=IMP;IDA] InterPro:IPR003650 InterPro:IPR011598
            Pfam:PF00010 PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353
            MGI:MGI:2135679 GO:GO:0005634 GO:GO:0003677 GO:GO:0007219
            GO:GO:0006351 GO:GO:0048511 GO:GO:0000122 GO:GO:0001756
            GO:GO:0001501 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0008134
            GO:GO:0036342 EMBL:AL645527 GeneTree:ENSGT00700000104130
            HOGENOM:HOG000236346 KO:K09087 CTD:84667 eggNOG:NOG293472
            HOVERGEN:HBG096052 OrthoDB:EOG415GFM EMBL:AB049065 EMBL:AB050104
            EMBL:AK050791 EMBL:BC134378 IPI:IPI00115087 RefSeq:NP_149030.2
            UniGene:Mm.98505 ProteinModelPortal:Q8BKT2 SMR:Q8BKT2 STRING:Q8BKT2
            PhosphoSite:Q8BKT2 PRIDE:Q8BKT2 Ensembl:ENSMUST00000024543
            GeneID:84653 KEGG:mmu:84653 UCSC:uc007jpi.1 InParanoid:A3KPD3
            OMA:LSGFREC NextBio:350927 Bgee:Q8BKT2 CleanEx:MM_HES7
            Genevestigator:Q8BKT2 GermOnline:ENSMUSG00000023781 Uniprot:Q8BKT2
        Length = 225

 Score = 135 (52.6 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
 Identities = 32/94 (34%), Positives = 58/94 (61%)

Query:    11 PEVMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRRQ 70
             P+++KP++E++RR RINR L+EL+ +++   + +     KLEKA+ILE  V +L +  R 
Sbjct:    13 PKMLKPLVEKRRRDRINRSLEELRLLLLERTRDQNLRNPKLEKAEILEFAVGYLRERSRV 72

Query:    71 QSLGL--TP--EA-AYADRFKAGFTHCAAEVSQY 99
             +  G+  +P  +A A A  + +GF  C   ++ +
Sbjct:    73 EPPGVPRSPGQDAEALASCYLSGFRECLLRLAAF 106

 Score = 33 (16.7 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
 Identities = 5/11 (45%), Positives = 8/11 (72%)

Query:   111 PSTEPTIDPSS 121
             P+  P +DP+S
Sbjct:   141 PAPRPPLDPAS 151


>RGD|1305914 [details] [associations]
            symbol:Hes7 "hairy and enhancer of split 7 (Drosophila)"
            species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
            of transcription from RNA polymerase II promoter" evidence=IEA;ISO]
            [GO:0001501 "skeletal system development" evidence=IEA;ISO]
            [GO:0001756 "somitogenesis" evidence=IEA;ISO] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0007219 "Notch signaling pathway" evidence=IEA;ISO] [GO:0036342
            "post-anal tail morphogenesis" evidence=IEA;ISO] [GO:0045892
            "negative regulation of transcription, DNA-dependent" evidence=ISO]
            [GO:0046983 "protein dimerization activity" evidence=IEA]
            [GO:0048511 "rhythmic process" evidence=IEA;ISO] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 PROSITE:PS51054
            SMART:SM00353 RGD:1305914 GO:GO:0005634 GO:GO:0003677 GO:GO:0007219
            GO:GO:0006351 GO:GO:0048511 GO:GO:0000122 GO:GO:0001756
            GO:GO:0001501 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CH473948
            GeneTree:ENSGT00700000104130 KO:K09087 CTD:84667 OrthoDB:EOG415GFM
            OMA:LSGFREC IPI:IPI00369659 RefSeq:NP_001099262.1 UniGene:Rn.218470
            Ensembl:ENSRNOT00000009757 GeneID:287423 KEGG:rno:287423
            UCSC:RGD:1305914 NextBio:626093 Uniprot:D3ZV20
        Length = 225

 Score = 135 (52.6 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
 Identities = 32/94 (34%), Positives = 58/94 (61%)

Query:    11 PEVMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRRQ 70
             P+++KP++E++RR RINR L+EL+ +++   + +     KLEKA+ILE  V +L +  R 
Sbjct:    13 PKMLKPLVEKRRRDRINRSLEELRLLLLERTRDQNLRNPKLEKAEILEFAVGYLRERSRV 72

Query:    71 QSLGL--TP--EA-AYADRFKAGFTHCAAEVSQY 99
             +  G+  +P  +A A A  + +GF  C   ++ +
Sbjct:    73 EPPGVPRSPGQDAEALASCYLSGFRECLLRLAAF 106

 Score = 33 (16.7 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
 Identities = 5/11 (45%), Positives = 8/11 (72%)

Query:   111 PSTEPTIDPSS 121
             P+  P +DP+S
Sbjct:   141 PAPRPPLDPAS 151


>UNIPROTKB|E2QXY9 [details] [associations]
            symbol:HES5 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:2000974 "negative regulation of pro-B cell
            differentiation" evidence=ISS] [GO:0043010 "camera-type eye
            development" evidence=ISS] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=ISS] [GO:2000737 "negative
            regulation of stem cell differentiation" evidence=ISS] [GO:0007420
            "brain development" evidence=ISS] [GO:0045893 "positive regulation
            of transcription, DNA-dependent" evidence=ISS] [GO:0097150
            "neuronal stem cell maintenance" evidence=ISS] [GO:0007219 "Notch
            signaling pathway" evidence=ISS] [GO:0051216 "cartilage
            development" evidence=ISS] [GO:0048661 "positive regulation of
            smooth muscle cell proliferation" evidence=ISS] [GO:0046427
            "positive regulation of JAK-STAT cascade" evidence=ISS] [GO:0042517
            "positive regulation of tyrosine phosphorylation of Stat3 protein"
            evidence=ISS] [GO:0008284 "positive regulation of cell
            proliferation" evidence=ISS] [GO:0002062 "chondrocyte
            differentiation" evidence=ISS] [GO:0048708 "astrocyte
            differentiation" evidence=ISS] [GO:0006461 "protein complex
            assembly" evidence=ISS] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0050767 "regulation of neurogenesis" evidence=ISS] [GO:0048469
            "cell maturation" evidence=ISS] [GO:0045665 "negative regulation of
            neuron differentiation" evidence=ISS] [GO:0045595 "regulation of
            cell differentiation" evidence=ISS] [GO:0042491 "auditory receptor
            cell differentiation" evidence=ISS] [GO:0031641 "regulation of
            myelination" evidence=ISS] [GO:0030513 "positive regulation of BMP
            signaling pathway" evidence=ISS] [GO:0022010 "central nervous
            system myelination" evidence=ISS] [GO:0021915 "neural tube
            development" evidence=ISS] [GO:0021781 "glial cell fate commitment"
            evidence=ISS] [GO:0021537 "telencephalon development" evidence=ISS]
            [GO:0014003 "oligodendrocyte development" evidence=ISS] [GO:0007224
            "smoothened signaling pathway" evidence=ISS] [GO:0007155 "cell
            adhesion" evidence=ISS] [GO:0001078 "RNA polymerase II core
            promoter proximal region sequence-specific DNA binding
            transcription factor activity involved in negative regulation of
            transcription" evidence=ISS] [GO:0048715 "negative regulation of
            oligodendrocyte differentiation" evidence=ISS] [GO:0048712
            "negative regulation of astrocyte differentiation" evidence=ISS]
            [GO:2000981 "negative regulation of inner ear receptor cell
            differentiation" evidence=IEA] [GO:0072282 "metanephric nephron
            tubule morphogenesis" evidence=IEA] [GO:0072086 "specification of
            loop of Henle identity" evidence=IEA] [GO:0072050 "S-shaped body
            morphogenesis" evidence=IEA] [GO:0072049 "comma-shaped body
            morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0045747 "positive regulation of Notch signaling pathway"
            evidence=IEA] [GO:0042668 "auditory receptor cell fate
            determination" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0046983 "protein dimerization activity" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 GO:GO:0005634 GO:GO:0045893
            GO:GO:0006461 GO:GO:0003677 GO:GO:0001078 GO:GO:0048661
            GO:GO:0045944 GO:GO:0045665 GO:GO:0007155 GO:GO:0007219
            GO:GO:0045747 GO:GO:0043010 GO:GO:0030513 GO:GO:0051216
            GO:GO:0022010 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0021915
            GO:GO:0007224 GO:GO:0042517 GO:GO:0048712 GO:GO:0042668
            GO:GO:0048469 InterPro:IPR018352 SMART:SM00511 GO:GO:0021537
            GO:GO:0048715 GO:GO:0031641 GO:GO:0042491 GO:GO:0097150
            GeneTree:ENSGT00700000104168 GO:GO:0048708 GO:GO:2000974
            GO:GO:0072049 GO:GO:0072282 GO:GO:2000737 GO:GO:0072050 CTD:388585
            KO:K06055 OMA:QFLTLHS GO:GO:0021781 GO:GO:2000981 GO:GO:0072086
            EMBL:AAEX03003867 RefSeq:XP_546734.2 ProteinModelPortal:E2QXY9
            Ensembl:ENSCAFT00000030874 GeneID:489614 KEGG:cfa:489614
            NextBio:20862770 Uniprot:E2QXY9
        Length = 165

 Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
 Identities = 43/128 (33%), Positives = 71/128 (55%)

Query:     2 STLSIEVVYPE----VMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADIL 57
             ST+++E++ P+    + KP++E+ RR RIN  +++LK ++         N SKLEKADIL
Sbjct:     4 STVAVELLSPKEKNRLRKPVVEKMRRDRINSSIEQLKLLLEQEFARHQPN-SKLEKADIL 62

Query:    58 ELTVRHLHKLRRQQSLGLTPEAAYADRFKAGFTHCAAEVSQYL----ASSMQQ----HQQ 109
             E+ V +L K  +  +    P++ + D +  G++ C  E  Q+L    AS  Q     H Q
Sbjct:    63 EMAVSYL-KHSKAFAAAAGPKSLHQD-YSEGYSWCLQEAVQFLTLHSASDTQMKLLYHFQ 120

Query:   110 QPSTEPTI 117
             +P   PT+
Sbjct:   121 RPPAAPTV 128


>UNIPROTKB|Q9BYE0 [details] [associations]
            symbol:HES7 "Transcription factor HES-7" species:9606 "Homo
            sapiens" [GO:0046983 "protein dimerization activity" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0007498 "mesoderm development" evidence=NAS]
            [GO:0005634 "nucleus" evidence=NAS] [GO:0003677 "DNA binding"
            evidence=NAS] [GO:0008134 "transcription factor binding"
            evidence=NAS] InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 GO:GO:0007275
            GO:GO:0005634 GO:GO:0006355 GO:GO:0007498 GO:GO:0003677
            GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0008134
            Orphanet:2311 HOGENOM:HOG000236346 KO:K09087 EMBL:AB049064
            EMBL:AC129492 IPI:IPI00000284 RefSeq:NP_115969.2 UniGene:Hs.434828
            ProteinModelPortal:Q9BYE0 SMR:Q9BYE0 STRING:Q9BYE0
            PhosphoSite:Q9BYE0 DMDM:296434525 PRIDE:Q9BYE0 DNASU:84667
            Ensembl:ENST00000317814 GeneID:84667 KEGG:hsa:84667 UCSC:uc002gkc.3
            CTD:84667 GeneCards:GC17M008056 H-InvDB:HIX0202522 HGNC:HGNC:15977
            MIM:608059 MIM:613686 neXtProt:NX_Q9BYE0 PharmGKB:PA29254
            eggNOG:NOG293472 HOVERGEN:HBG096052 InParanoid:Q9BYE0
            OrthoDB:EOG415GFM PhylomeDB:Q9BYE0 GenomeRNAi:84667 NextBio:74661
            ArrayExpress:Q9BYE0 Bgee:Q9BYE0 CleanEx:HS_HES7
            Genevestigator:Q9BYE0 GermOnline:ENSG00000179111 Uniprot:Q9BYE0
        Length = 225

 Score = 135 (52.6 bits), Expect = 4.8e-11, Sum P(2) = 4.8e-11
 Identities = 32/94 (34%), Positives = 58/94 (61%)

Query:    11 PEVMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRRQ 70
             P+++KP++E++RR RINR L+EL+ +++   + +     KLEKA+ILE  V +L +  R 
Sbjct:    13 PKMLKPLVEKRRRDRINRSLEELRLLLLERTRDQNLRNPKLEKAEILEFAVGYLRERSRV 72

Query:    71 QSLGL--TP--EA-AYADRFKAGFTHCAAEVSQY 99
             +  G+  +P  +A A A  + +GF  C   ++ +
Sbjct:    73 EPPGVPRSPVQDAEALASCYLSGFRECLLRLAAF 106

 Score = 32 (16.3 bits), Expect = 4.8e-11, Sum P(2) = 4.8e-11
 Identities = 4/11 (36%), Positives = 9/11 (81%)

Query:   111 PSTEPTIDPSS 121
             P+  P++DP++
Sbjct:   141 PAPRPSLDPAA 151


>UNIPROTKB|E5RHK6 [details] [associations]
            symbol:HEY1 "Hairy/enhancer-of-split-related with YRPW
            motif protein 1" species:9606 "Homo sapiens" [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0046983 "protein dimerization activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 GO:GO:0005634
            GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 Gene3D:4.10.280.10
            SUPFAM:SSF47459 InterPro:IPR018352 SMART:SM00511 EMBL:AC016240
            HGNC:HGNC:4880 ChiTaRS:HEY1 IPI:IPI00979760
            ProteinModelPortal:E5RHK6 SMR:E5RHK6 Ensembl:ENST00000518733
            ArrayExpress:E5RHK6 Bgee:E5RHK6 Uniprot:E5RHK6
        Length = 186

 Score = 152 (58.6 bits), Expect = 5.8e-11, P = 5.8e-11
 Identities = 35/100 (35%), Positives = 61/100 (61%)

Query:     3 TLSIEVVYPEVMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVR 62
             T S +++  +  + ++E++RR RIN  L EL+ ++ ++ + +G   +KLEKA+IL++TV 
Sbjct:     4 TTSSQILARKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQGS--AKLEKAEILQMTVD 61

Query:    63 HLHKLRRQQSLGLTPEAAYADRFKA-GFTHCAAEVSQYLA 101
             HL  L      G     A A  +++ GF  C AEV++YL+
Sbjct:    62 HLKMLHTAGGKGYFDAHALAMDYRSLGFRECLAEVARYLS 101


>UNIPROTKB|K7EJQ0 [details] [associations]
            symbol:HES2 "Transcription factor HES-2" species:9606 "Homo
            sapiens" [GO:0046983 "protein dimerization activity" evidence=IEA]
            InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
            Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL031848 HGNC:HGNC:16005
            Ensembl:ENST00000489730 Uniprot:K7EJQ0
        Length = 82

 Score = 152 (58.6 bits), Expect = 5.8e-11, P = 5.8e-11
 Identities = 30/54 (55%), Positives = 42/54 (77%)

Query:    14 MKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKL 67
             +KP+LE++RRARIN+ L +LK +++  L  E  N SKLEKAD+LE+TVR L +L
Sbjct:    17 LKPLLEKRRRARINQSLSQLKGLILPLLGRENSNCSKLEKADVLEMTVRFLQEL 70


>MGI|MGI:1341884 [details] [associations]
            symbol:Hey2 "hairy/enhancer-of-split related with YRPW motif
            2" species:10090 "Mus musculus" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter"
            evidence=ISO;IGI;IMP;IDA] [GO:0000983 "RNA polymerase II core
            promoter sequence-specific DNA binding transcription factor
            activity" evidence=IDA] [GO:0000988 "protein binding transcription
            factor activity" evidence=ISO;IDA] [GO:0001102 "RNA polymerase II
            activating transcription factor binding" evidence=ISO] [GO:0001568
            "blood vessel development" evidence=IGI] [GO:0001570
            "vasculogenesis" evidence=IGI] [GO:0003150 "muscular septum
            morphogenesis" evidence=IMP] [GO:0003151 "outflow tract
            morphogenesis" evidence=IMP] [GO:0003171 "atrioventricular valve
            development" evidence=IMP] [GO:0003184 "pulmonary valve
            morphogenesis" evidence=IMP] [GO:0003186 "tricuspid valve
            morphogenesis" evidence=IMP] [GO:0003195 "tricuspid valve
            formation" evidence=IMP] [GO:0003199 "endocardial cushion to
            mesenchymal transition involved in heart valve formation"
            evidence=IGI] [GO:0003208 "cardiac ventricle morphogenesis"
            evidence=IMP] [GO:0003214 "cardiac left ventricle morphogenesis"
            evidence=IMP] [GO:0003215 "cardiac right ventricle morphogenesis"
            evidence=IMP] [GO:0003222 "ventricular trabecula myocardium
            morphogenesis" evidence=IGI] [GO:0003300 "cardiac muscle
            hypertrophy" evidence=IMP] [GO:0003677 "DNA binding" evidence=IMP]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=ISO;ISS;IDA] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005667
            "transcription factor complex" evidence=ISS] [GO:0005737
            "cytoplasm" evidence=IDA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
            of transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0007219 "Notch signaling pathway" evidence=ISO;IDA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0007389
            "pattern specification process" evidence=IGI;IMP] [GO:0008134
            "transcription factor binding" evidence=IPI] [GO:0009948
            "anterior/posterior axis specification" evidence=IGI] [GO:0010460
            "positive regulation of heart rate" evidence=IMP] [GO:0010468
            "regulation of gene expression" evidence=IMP] [GO:0010629 "negative
            regulation of gene expression" evidence=IMP] [GO:0010667 "negative
            regulation of cardiac muscle cell apoptotic process" evidence=IMP]
            [GO:0014031 "mesenchymal cell development" evidence=IMP]
            [GO:0014898 "cardiac muscle hypertrophy in response to stress"
            evidence=IDA] [GO:0017053 "transcriptional repressor complex"
            evidence=ISO] [GO:0035910 "ascending aorta morphogenesis"
            evidence=IMP] [GO:0035912 "dorsal aorta morphogenesis"
            evidence=IGI] [GO:0035939 "microsatellite binding"
            evidence=ISO;IDA] [GO:0036304 "umbilical cord morphogenesis"
            evidence=IGI] [GO:0042826 "histone deacetylase binding"
            evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
            evidence=ISO;IDA] [GO:0045165 "cell fate commitment" evidence=IMP]
            [GO:0045607 "regulation of auditory receptor cell differentiation"
            evidence=IGI] [GO:0045746 "negative regulation of Notch signaling
            pathway" evidence=IDA;IMP] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=ISO;IDA;IMP] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IMP] [GO:0046983 "protein dimerization activity"
            evidence=IEA] [GO:0055015 "ventricular cardiac muscle cell
            development" evidence=IMP] [GO:0060045 "positive regulation of
            cardiac muscle cell proliferation" evidence=IMP] [GO:0060317
            "cardiac epithelial to mesenchymal transition" evidence=IMP]
            [GO:0060347 "heart trabecula formation" evidence=IMP] [GO:0060411
            "cardiac septum morphogenesis" evidence=IMP] [GO:0060412
            "ventricular septum morphogenesis" evidence=IMP] [GO:0060413
            "atrial septum morphogenesis" evidence=IMP] [GO:0060633 "negative
            regulation of transcription initiation from RNA polymerase II
            promoter" evidence=ISO] [GO:0060716 "labyrinthine layer blood
            vessel development" evidence=IGI] [GO:0060840 "artery development"
            evidence=IGI] [GO:0060842 "arterial endothelial cell
            differentiation" evidence=IGI] [GO:0060948 "cardiac vascular smooth
            muscle cell development" evidence=IMP] [GO:0060977 "coronary
            vasculature morphogenesis" evidence=IMP] [GO:0061156 "pulmonary
            artery morphogenesis" evidence=IMP] [GO:0061314 "Notch signaling
            involved in heart development" evidence=IC] [GO:0065004
            "protein-DNA complex assembly" evidence=IDA] [GO:0090102 "cochlea
            development" evidence=IGI;IMP] [GO:2000678 "negative regulation of
            transcription regulatory region DNA binding" evidence=ISO;IDA]
            [GO:2000820 "negative regulation of transcription from RNA
            polymerase II promoter involved in smooth muscle cell
            differentiation" evidence=IDA] [GO:2001212 "regulation of
            vasculogenesis" evidence=IGI] InterPro:IPR003650 InterPro:IPR011598
            Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054
            SMART:SM00353 MGI:MGI:1341884 GO:GO:0005737 GO:GO:0017053
            GO:GO:0045944 Reactome:REACT_115202 GO:GO:0005667 GO:GO:0010460
            GO:GO:0001570 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0060716
            GO:GO:0014898 GO:GO:0009948 GO:GO:0003151 GO:GO:0000983
            GO:GO:0045165 GO:GO:0090102 GO:GO:0055015 GO:GO:0060347
            InterPro:IPR018352 SMART:SM00511 GO:GO:0060045 GO:GO:0045746
            GO:GO:0003214 GO:GO:0060413 GO:GO:0061156 GO:GO:0060633
            GO:GO:0000988 GO:GO:0016580 GO:GO:0061314 GO:GO:0035912
            GO:GO:0003222 GeneTree:ENSGT00700000104130 GO:GO:0003199
            GO:GO:0065004 GO:GO:0003195 GO:GO:0003215 GO:GO:0003150
            GO:GO:2000678 GO:GO:0010667 GO:GO:0035910 HOGENOM:HOG000286035
            HOVERGEN:HBG003275 KO:K09091 OrthoDB:EOG4GB77H GO:GO:0035939
            GO:GO:2000820 GO:GO:0060842 GO:GO:0003184 GO:GO:2001212
            GO:GO:0036304 CTD:23493 eggNOG:NOG324798 OMA:TCASQRE GO:GO:0003171
            GO:GO:0060948 GO:GO:0060977 GO:GO:0045607 EMBL:AF172287
            EMBL:AJ271867 EMBL:AF173902 EMBL:AF232240 EMBL:AB093589
            EMBL:AK031506 EMBL:AK158000 EMBL:BC103575 EMBL:BC103576
            IPI:IPI00132126 RefSeq:NP_038932.1 UniGene:Mm.103573
            ProteinModelPortal:Q9QUS4 SMR:Q9QUS4 IntAct:Q9QUS4 STRING:Q9QUS4
            PhosphoSite:Q9QUS4 PRIDE:Q9QUS4 Ensembl:ENSMUST00000019924
            GeneID:15214 KEGG:mmu:15214 InParanoid:Q9QUS4 NextBio:287789
            Bgee:Q9QUS4 CleanEx:MM_HEY2 Genevestigator:Q9QUS4
            GermOnline:ENSMUSG00000019789 Uniprot:Q9QUS4
        Length = 339

 Score = 157 (60.3 bits), Expect = 6.4e-11, P = 6.4e-11
 Identities = 36/101 (35%), Positives = 61/101 (60%)

Query:     3 TLSIEVVYPEVMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVR 62
             T + +++  +  + ++E++RR RIN  L EL+ ++ T+ + +G   +KLEKA+IL++TV 
Sbjct:    41 TTTSQIMARKKRRGIIEKRRRDRINNSLSELRRLVPTAFEKQGS--AKLEKAEILQMTVD 98

Query:    63 HLHKLRRQQSLGLTPEAAYADRFKA-GFTHCAAEVSQYLAS 102
             HL  L+     G     A A  F + GF  C  EV++YL+S
Sbjct:    99 HLKMLQATGGKGYFDAHALATDFMSIGFRECLTEVARYLSS 139


>UNIPROTKB|G3V7S6 [details] [associations]
            symbol:Hey2 "Protein Hey2" species:10116 "Rattus
            norvegicus" [GO:0000983 "RNA polymerase II core promoter
            sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0000988 "protein binding transcription factor
            activity" evidence=IEA] [GO:0001102 "RNA polymerase II activating
            transcription factor binding" evidence=IEA] [GO:0001570
            "vasculogenesis" evidence=IEA] [GO:0003150 "muscular septum
            morphogenesis" evidence=IEA] [GO:0003151 "outflow tract
            morphogenesis" evidence=IEA] [GO:0003171 "atrioventricular valve
            development" evidence=IEA] [GO:0003184 "pulmonary valve
            morphogenesis" evidence=IEA] [GO:0003195 "tricuspid valve
            formation" evidence=IEA] [GO:0003199 "endocardial cushion to
            mesenchymal transition involved in heart valve formation"
            evidence=IEA] [GO:0003214 "cardiac left ventricle morphogenesis"
            evidence=IEA] [GO:0003215 "cardiac right ventricle morphogenesis"
            evidence=IEA] [GO:0003222 "ventricular trabecula myocardium
            morphogenesis" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0007219 "Notch signaling pathway" evidence=IEA] [GO:0009948
            "anterior/posterior axis specification" evidence=IEA] [GO:0010460
            "positive regulation of heart rate" evidence=IEA] [GO:0010667
            "negative regulation of cardiac muscle cell apoptotic process"
            evidence=IEA] [GO:0014898 "cardiac muscle hypertrophy in response
            to stress" evidence=IEA] [GO:0016580 "Sin3 complex" evidence=IEA]
            [GO:0017053 "transcriptional repressor complex" evidence=IEA]
            [GO:0035910 "ascending aorta morphogenesis" evidence=IEA]
            [GO:0035912 "dorsal aorta morphogenesis" evidence=IEA] [GO:0035939
            "microsatellite binding" evidence=IEA] [GO:0036304 "umbilical cord
            morphogenesis" evidence=IEA] [GO:0042826 "histone deacetylase
            binding" evidence=IEA] [GO:0045165 "cell fate commitment"
            evidence=IEA] [GO:0045607 "regulation of auditory receptor cell
            differentiation" evidence=IEA] [GO:0045746 "negative regulation of
            Notch signaling pathway" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0046983 "protein dimerization activity"
            evidence=IEA] [GO:0055015 "ventricular cardiac muscle cell
            development" evidence=IEA] [GO:0060045 "positive regulation of
            cardiac muscle cell proliferation" evidence=IEA] [GO:0060347 "heart
            trabecula formation" evidence=IEA] [GO:0060413 "atrial septum
            morphogenesis" evidence=IEA] [GO:0060633 "negative regulation of
            transcription initiation from RNA polymerase II promoter"
            evidence=IEA] [GO:0060716 "labyrinthine layer blood vessel
            development" evidence=IEA] [GO:0060842 "arterial endothelial cell
            differentiation" evidence=IEA] [GO:0060948 "cardiac vascular smooth
            muscle cell development" evidence=IEA] [GO:0060977 "coronary
            vasculature morphogenesis" evidence=IEA] [GO:0061156 "pulmonary
            artery morphogenesis" evidence=IEA] [GO:0065004 "protein-DNA
            complex assembly" evidence=IEA] [GO:0090102 "cochlea development"
            evidence=IEA] [GO:2000678 "negative regulation of transcription
            regulatory region DNA binding" evidence=IEA] [GO:2000820 "negative
            regulation of transcription from RNA polymerase II promoter
            involved in smooth muscle cell differentiation" evidence=IEA]
            [GO:2001212 "regulation of vasculogenesis" evidence=IEA]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 RGD:621405
            GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
            Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR018352 SMART:SM00511
            EMBL:CH474002 GeneTree:ENSGT00700000104130 KO:K09091 CTD:23493
            OMA:TCASQRE RefSeq:NP_569101.1 UniGene:Rn.58672
            Ensembl:ENSRNOT00000018718 GeneID:155430 KEGG:rno:155430
            NextBio:620911 Uniprot:G3V7S6
        Length = 339

 Score = 157 (60.3 bits), Expect = 6.4e-11, P = 6.4e-11
 Identities = 36/101 (35%), Positives = 61/101 (60%)

Query:     3 TLSIEVVYPEVMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVR 62
             T + +++  +  + ++E++RR RIN  L EL+ ++ T+ + +G   +KLEKA+IL++TV 
Sbjct:    41 TTTSQIMARKKRRGIIEKRRRDRINNSLSELRRLVPTAFEKQGS--AKLEKAEILQMTVD 98

Query:    63 HLHKLRRQQSLGLTPEAAYADRFKA-GFTHCAAEVSQYLAS 102
             HL  L+     G     A A  F + GF  C  EV++YL+S
Sbjct:    99 HLKMLQATGGKGYFDAHALATDFMSIGFRECLTEVARYLSS 139


>MGI|MGI:1098624 [details] [associations]
            symbol:Hes2 "hairy and enhancer of split 2 (Drosophila)"
            species:10090 "Mus musculus" [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003690 "double-stranded DNA binding"
            evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0008134 "transcription factor binding" evidence=NAS]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=ISO] [GO:0046983 "protein dimerization activity"
            evidence=IEA] InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010
            Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353
            MGI:MGI:1098624 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
            GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0008134
            EMBL:CH466594 EMBL:AL772240 GeneTree:ENSGT00700000104168
            HOGENOM:HOG000236346 HOVERGEN:HBG005960 CTD:54626 eggNOG:NOG259850
            KO:K09087 OMA:EGYSACV EMBL:AB009967 EMBL:AK053792 EMBL:BC138112
            IPI:IPI00117879 IPI:IPI00554874 RefSeq:NP_032262.2 UniGene:Mm.57038
            ProteinModelPortal:O54792 STRING:O54792 PhosphoSite:O54792
            PRIDE:O54792 Ensembl:ENSMUST00000030782 GeneID:15206 KEGG:mmu:15206
            InParanoid:O54792 OrthoDB:EOG4KPTC7 NextBio:287761 CleanEx:MM_HES2
            Genevestigator:O54792 GermOnline:ENSMUSG00000028940 Uniprot:O54792
        Length = 157

 Score = 151 (58.2 bits), Expect = 7.4e-11, P = 7.4e-11
 Identities = 38/89 (42%), Positives = 55/89 (61%)

Query:    14 MKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRRQQSL 73
             +KP+LE++RRARIN  L +LK +++  L AE    SKLEKADILE+TVR L    ++Q  
Sbjct:    17 LKPLLEKRRRARINESLSQLKGLVLPLLGAETSRSSKLEKADILEMTVRFL----QEQPA 72

Query:    74 GLTPEAAYA--DRFKAGFTHCAAEVSQYL 100
              L   AA    + +  G+  C A +++ L
Sbjct:    73 TLYSSAAPGPLNSYLEGYRACLARLARVL 101


>RGD|1312047 [details] [associations]
            symbol:Hes6 "hairy and enhancer of split 6 (Drosophila)"
            species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA;ISO] [GO:0003712
            "transcription cofactor activity" evidence=IEA;ISO] [GO:0005667
            "transcription factor complex" evidence=IEA;ISO] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006357
            "regulation of transcription from RNA polymerase II promoter"
            evidence=IEA;ISO] [GO:0007399 "nervous system development"
            evidence=IEA;ISO] [GO:0030154 "cell differentiation"
            evidence=IEA;ISO] [GO:0046983 "protein dimerization activity"
            evidence=IEA] InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010
            Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353
            RGD:1312047 GO:GO:0007399 GO:GO:0030154 GO:GO:0003677 GO:GO:0003700
            GO:GO:0006357 GO:GO:0006351 GO:GO:0005667 GO:GO:0003712
            Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00700000104130
            eggNOG:NOG241578 HOGENOM:HOG000236346 KO:K09087 CTD:55502
            HOVERGEN:HBG107098 OrthoDB:EOG4G7C0H EMBL:BC087597 IPI:IPI00201934
            RefSeq:NP_001013197.1 UniGene:Rn.11980 STRING:Q5PPN0
            Ensembl:ENSRNOT00000066346 GeneID:316626 KEGG:rno:316626
            UCSC:RGD:1312047 NextBio:671094 Genevestigator:Q5PPN0
            Uniprot:Q5PPN0
        Length = 234

 Score = 151 (58.2 bits), Expect = 7.4e-11, P = 7.4e-11
 Identities = 37/95 (38%), Positives = 58/95 (61%)

Query:    10 YPEVMKPMLERKRRARINRCLDELKEIMV-TSLQAEGENVSKLEKADILELTVRHLH-KL 67
             +P+  KP++E+KRRARIN  L EL+ ++  T +QA      KLE A++LELTVR +   L
Sbjct:    35 FPQARKPLVEKKRRARINESLQELRLLLAGTEVQA------KLENAEVLELTVRRVQGAL 88

Query:    68 RRQQSLGLTPEAAYADRFKAGFTHCAAEVSQYLAS 102
             R +       +A  ++RF AG+  C  EV  ++++
Sbjct:    89 RGRAREREQLQAEASERFAAGYIQCMHEVHTFVST 123


>UNIPROTKB|E1BEV8 [details] [associations]
            symbol:HEY2 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:2001212 "regulation of vasculogenesis" evidence=IEA]
            [GO:2000820 "negative regulation of transcription from RNA
            polymerase II promoter involved in smooth muscle cell
            differentiation" evidence=IEA] [GO:2000678 "negative regulation of
            transcription regulatory region DNA binding" evidence=IEA]
            [GO:0090102 "cochlea development" evidence=IEA] [GO:0065004
            "protein-DNA complex assembly" evidence=IEA] [GO:0061156 "pulmonary
            artery morphogenesis" evidence=IEA] [GO:0060977 "coronary
            vasculature morphogenesis" evidence=IEA] [GO:0060948 "cardiac
            vascular smooth muscle cell development" evidence=IEA] [GO:0060842
            "arterial endothelial cell differentiation" evidence=IEA]
            [GO:0060716 "labyrinthine layer blood vessel development"
            evidence=IEA] [GO:0060633 "negative regulation of transcription
            initiation from RNA polymerase II promoter" evidence=IEA]
            [GO:0060413 "atrial septum morphogenesis" evidence=IEA] [GO:0060347
            "heart trabecula formation" evidence=IEA] [GO:0060045 "positive
            regulation of cardiac muscle cell proliferation" evidence=IEA]
            [GO:0055015 "ventricular cardiac muscle cell development"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0045746
            "negative regulation of Notch signaling pathway" evidence=IEA]
            [GO:0045607 "regulation of auditory receptor cell differentiation"
            evidence=IEA] [GO:0045165 "cell fate commitment" evidence=IEA]
            [GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0036304
            "umbilical cord morphogenesis" evidence=IEA] [GO:0035939
            "microsatellite binding" evidence=IEA] [GO:0035912 "dorsal aorta
            morphogenesis" evidence=IEA] [GO:0035910 "ascending aorta
            morphogenesis" evidence=IEA] [GO:0017053 "transcriptional repressor
            complex" evidence=IEA] [GO:0016580 "Sin3 complex" evidence=IEA]
            [GO:0014898 "cardiac muscle hypertrophy in response to stress"
            evidence=IEA] [GO:0010667 "negative regulation of cardiac muscle
            cell apoptotic process" evidence=IEA] [GO:0010460 "positive
            regulation of heart rate" evidence=IEA] [GO:0009948
            "anterior/posterior axis specification" evidence=IEA] [GO:0007219
            "Notch signaling pathway" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0003222 "ventricular trabecula myocardium
            morphogenesis" evidence=IEA] [GO:0003215 "cardiac right ventricle
            morphogenesis" evidence=IEA] [GO:0003214 "cardiac left ventricle
            morphogenesis" evidence=IEA] [GO:0003199 "endocardial cushion to
            mesenchymal transition involved in heart valve formation"
            evidence=IEA] [GO:0003195 "tricuspid valve formation" evidence=IEA]
            [GO:0003184 "pulmonary valve morphogenesis" evidence=IEA]
            [GO:0003171 "atrioventricular valve development" evidence=IEA]
            [GO:0003151 "outflow tract morphogenesis" evidence=IEA] [GO:0003150
            "muscular septum morphogenesis" evidence=IEA] [GO:0001570
            "vasculogenesis" evidence=IEA] [GO:0001102 "RNA polymerase II
            activating transcription factor binding" evidence=IEA] [GO:0000988
            "protein binding transcription factor activity" evidence=IEA]
            [GO:0000983 "RNA polymerase II core promoter sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0046983
            "protein dimerization activity" evidence=IEA] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 GO:GO:0005737 GO:GO:0017053
            GO:GO:0043565 GO:GO:0007219 GO:GO:0060840 GO:GO:0010460
            GO:GO:0001570 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0014898
            GO:GO:0009948 GO:GO:0000983 GO:GO:0045165 GO:GO:0090102
            GO:GO:0055015 InterPro:IPR018352 SMART:SM00511 GO:GO:0060045
            GO:GO:0045746 GO:GO:0060633 GO:GO:0016580 GO:GO:0003222
            GeneTree:ENSGT00700000104130 GO:GO:0003199 GO:GO:0065004
            GO:GO:0003195 GO:GO:0010667 KO:K09091 GO:GO:2000820 CTD:23493
            OMA:TCASQRE GO:GO:0003171 GO:GO:0060948 GO:GO:0060977 GO:GO:0045607
            EMBL:DAAA02025584 EMBL:DAAA02025585 IPI:IPI00703302
            RefSeq:NP_001178984.1 UniGene:Bt.49817 Ensembl:ENSBTAT00000001214
            GeneID:538619 KEGG:bta:538619 NextBio:20877478 Uniprot:E1BEV8
        Length = 337

 Score = 156 (60.0 bits), Expect = 8.1e-11, P = 8.1e-11
 Identities = 36/101 (35%), Positives = 60/101 (59%)

Query:     3 TLSIEVVYPEVMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVR 62
             T + +++  +  + ++E++RR RIN  L EL+ ++ T+ + +G   +KLEKA+IL++TV 
Sbjct:    41 TTTSQIMARKKRRGIIEKRRRDRINNSLSELRRLVPTAFEKQGS--AKLEKAEILQMTVD 98

Query:    63 HLHKLRRQQSLGLTPEAAYA-DRFKAGFTHCAAEVSQYLAS 102
             HL  L+     G     A A D    GF  C  EV++YL+S
Sbjct:    99 HLKMLQATGGKGYFDAHALAMDFMSIGFRECLTEVARYLSS 139


>UNIPROTKB|Q9UBP5 [details] [associations]
            symbol:HEY2 "Hairy/enhancer-of-split related with YRPW
            motif protein 2" species:9606 "Homo sapiens" [GO:0046983 "protein
            dimerization activity" evidence=IEA] [GO:0001570 "vasculogenesis"
            evidence=IEA] [GO:0003171 "atrioventricular valve development"
            evidence=IEA] [GO:0003195 "tricuspid valve formation" evidence=IEA]
            [GO:0003199 "endocardial cushion to mesenchymal transition involved
            in heart valve formation" evidence=IEA] [GO:0003222 "ventricular
            trabecula myocardium morphogenesis" evidence=IEA] [GO:0009948
            "anterior/posterior axis specification" evidence=IEA] [GO:0010460
            "positive regulation of heart rate" evidence=IEA] [GO:0010667
            "negative regulation of cardiac muscle cell apoptotic process"
            evidence=IEA] [GO:0014898 "cardiac muscle hypertrophy in response
            to stress" evidence=IEA] [GO:0045165 "cell fate commitment"
            evidence=IEA] [GO:0045607 "regulation of auditory receptor cell
            differentiation" evidence=IEA] [GO:0045746 "negative regulation of
            Notch signaling pathway" evidence=IEA] [GO:0060045 "positive
            regulation of cardiac muscle cell proliferation" evidence=IEA]
            [GO:0060347 "heart trabecula formation" evidence=IEA] [GO:0060948
            "cardiac vascular smooth muscle cell development" evidence=IEA]
            [GO:0060977 "coronary vasculature morphogenesis" evidence=IEA]
            [GO:0065004 "protein-DNA complex assembly" evidence=IEA]
            [GO:0090102 "cochlea development" evidence=IEA] [GO:0000122
            "negative regulation of transcription from RNA polymerase II
            promoter" evidence=IMP;IDA] [GO:0000988 "protein binding
            transcription factor activity" evidence=IDA] [GO:0005634 "nucleus"
            evidence=ISS] [GO:0010629 "negative regulation of gene expression"
            evidence=ISS] [GO:0007219 "Notch signaling pathway"
            evidence=ISS;TAS] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=IDA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0055015
            "ventricular cardiac muscle cell development" evidence=ISS]
            [GO:0097084 "vascular smooth muscle cell development" evidence=IEP]
            [GO:0035939 "microsatellite binding" evidence=IDA] [GO:0008134
            "transcription factor binding" evidence=NAS] [GO:0000983 "RNA
            polymerase II core promoter sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0003208 "cardiac
            ventricle morphogenesis" evidence=ISS] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0042826 "histone deacetylase binding"
            evidence=IPI] [GO:2000678 "negative regulation of transcription
            regulatory region DNA binding" evidence=IDA] [GO:0060633 "negative
            regulation of transcription initiation from RNA polymerase II
            promoter" evidence=IDA] [GO:0016580 "Sin3 complex" evidence=IDA]
            [GO:0017053 "transcriptional repressor complex" evidence=IDA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IDA]
            [GO:0001102 "RNA polymerase II activating transcription factor
            binding" evidence=IPI] [GO:0003150 "muscular septum morphogenesis"
            evidence=ISS] [GO:0003151 "outflow tract morphogenesis"
            evidence=ISS] [GO:0003184 "pulmonary valve morphogenesis"
            evidence=ISS] [GO:0003186 "tricuspid valve morphogenesis"
            evidence=ISS] [GO:0003214 "cardiac left ventricle morphogenesis"
            evidence=ISS] [GO:0003215 "cardiac right ventricle morphogenesis"
            evidence=ISS] [GO:0035910 "ascending aorta morphogenesis"
            evidence=ISS] [GO:0060412 "ventricular septum morphogenesis"
            evidence=ISS] [GO:0060413 "atrial septum morphogenesis"
            evidence=ISS] [GO:0061156 "pulmonary artery morphogenesis"
            evidence=ISS] [GO:0061314 "Notch signaling involved in heart
            development" evidence=IC] [GO:0060411 "cardiac septum
            morphogenesis" evidence=ISS] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0035912 "dorsal aorta morphogenesis" evidence=ISS] [GO:0060842
            "arterial endothelial cell differentiation" evidence=ISS]
            [GO:0060716 "labyrinthine layer blood vessel development"
            evidence=ISS] [GO:0036304 "umbilical cord morphogenesis"
            evidence=ISS] [GO:2001212 "regulation of vasculogenesis"
            evidence=ISS] [GO:0051145 "smooth muscle cell differentiation"
            evidence=NAS] [GO:0014031 "mesenchymal cell development"
            evidence=ISS] [GO:0060317 "cardiac epithelial to mesenchymal
            transition" evidence=ISS] [GO:0010621 "negative regulation of
            transcription by transcription factor localization" evidence=ISS]
            [GO:2000723 "negative regulation of cardiac vascular smooth muscle
            cell differentiation" evidence=ISS] [GO:2000820 "negative
            regulation of transcription from RNA polymerase II promoter
            involved in smooth muscle cell differentiation" evidence=ISS]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 GO:GO:0005737
            Reactome:REACT_111102 GO:GO:0017053 GO:GO:0045944 GO:GO:0060317
            GO:GO:0010460 GO:GO:0097084 GO:GO:0001570 Gene3D:4.10.280.10
            SUPFAM:SSF47459 GO:GO:0008134 GO:GO:0060716 GO:GO:0014898
            GO:GO:0009948 GO:GO:0003151 GO:GO:0000983 GO:GO:0045165
            GO:GO:0090102 GO:GO:0055015 InterPro:IPR018352 SMART:SM00511
            GO:GO:0060045 GO:GO:0045746 GO:GO:0003214 GO:GO:0060413
            GO:GO:0061156 GO:GO:0060633 GO:GO:0000988 GO:GO:0061314
            GO:GO:0035912 GO:GO:0003222 GO:GO:0003199 GO:GO:0065004
            GO:GO:0003195 GO:GO:0003215 GO:GO:0003150 GO:GO:2000678
            GO:GO:0010667 GO:GO:0010621 GO:GO:0035910 HOGENOM:HOG000286035
            HOVERGEN:HBG003275 KO:K09091 OrthoDB:EOG4GB77H GO:GO:0035939
            GO:GO:2000820 GO:GO:0060842 GO:GO:0003184 GO:GO:2001212
            GO:GO:0036304 CTD:23493 eggNOG:NOG324798 OMA:TCASQRE EMBL:AJ249545
            EMBL:AF237949 EMBL:AF173901 EMBL:AF311884 EMBL:AF232238
            EMBL:AB044755 EMBL:BT020067 EMBL:BT020068 EMBL:AL078594
            EMBL:BC007707 IPI:IPI00016845 RefSeq:NP_036391.1 UniGene:Hs.144287
            ProteinModelPortal:Q9UBP5 SMR:Q9UBP5 IntAct:Q9UBP5
            MINT:MINT-1469894 STRING:Q9UBP5 PhosphoSite:Q9UBP5 DMDM:74762767
            PRIDE:Q9UBP5 DNASU:23493 Ensembl:ENST00000368364 GeneID:23493
            KEGG:hsa:23493 UCSC:uc003qad.3 GeneCards:GC06P126068 HGNC:HGNC:4881
            HPA:HPA030205 MIM:604674 neXtProt:NX_Q9UBP5 PharmGKB:PA29259
            InParanoid:Q9UBP5 PhylomeDB:Q9UBP5 GenomeRNAi:23493 NextBio:45859
            ArrayExpress:Q9UBP5 Bgee:Q9UBP5 CleanEx:HS_HEY2
            Genevestigator:Q9UBP5 GermOnline:ENSG00000135547 GO:GO:0003171
            GO:GO:0060948 GO:GO:0060977 GO:GO:2000723 GO:GO:0045607
            GO:GO:0003186 Uniprot:Q9UBP5
        Length = 337

 Score = 156 (60.0 bits), Expect = 8.1e-11, P = 8.1e-11
 Identities = 36/101 (35%), Positives = 60/101 (59%)

Query:     3 TLSIEVVYPEVMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVR 62
             T + +++  +  + ++E++RR RIN  L EL+ ++ T+ + +G   +KLEKA+IL++TV 
Sbjct:    41 TTTSQIMARKKRRGIIEKRRRDRINNSLSELRRLVPTAFEKQGS--AKLEKAEILQMTVD 98

Query:    63 HLHKLRRQQSLGLTPEAAYA-DRFKAGFTHCAAEVSQYLAS 102
             HL  L+     G     A A D    GF  C  EV++YL+S
Sbjct:    99 HLKMLQATGGKGYFDAHALAMDFMSIGFRECLTEVARYLSS 139


>UNIPROTKB|F1S2V4 [details] [associations]
            symbol:HEY2 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:2001212 "regulation of vasculogenesis" evidence=IEA]
            [GO:2000820 "negative regulation of transcription from RNA
            polymerase II promoter involved in smooth muscle cell
            differentiation" evidence=IEA] [GO:2000678 "negative regulation of
            transcription regulatory region DNA binding" evidence=IEA]
            [GO:0090102 "cochlea development" evidence=IEA] [GO:0065004
            "protein-DNA complex assembly" evidence=IEA] [GO:0061156 "pulmonary
            artery morphogenesis" evidence=IEA] [GO:0060977 "coronary
            vasculature morphogenesis" evidence=IEA] [GO:0060948 "cardiac
            vascular smooth muscle cell development" evidence=IEA] [GO:0060842
            "arterial endothelial cell differentiation" evidence=IEA]
            [GO:0060716 "labyrinthine layer blood vessel development"
            evidence=IEA] [GO:0060633 "negative regulation of transcription
            initiation from RNA polymerase II promoter" evidence=IEA]
            [GO:0060413 "atrial septum morphogenesis" evidence=IEA] [GO:0060347
            "heart trabecula formation" evidence=IEA] [GO:0060045 "positive
            regulation of cardiac muscle cell proliferation" evidence=IEA]
            [GO:0055015 "ventricular cardiac muscle cell development"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0045746
            "negative regulation of Notch signaling pathway" evidence=IEA]
            [GO:0045607 "regulation of auditory receptor cell differentiation"
            evidence=IEA] [GO:0045165 "cell fate commitment" evidence=IEA]
            [GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0036304
            "umbilical cord morphogenesis" evidence=IEA] [GO:0035939
            "microsatellite binding" evidence=IEA] [GO:0035912 "dorsal aorta
            morphogenesis" evidence=IEA] [GO:0035910 "ascending aorta
            morphogenesis" evidence=IEA] [GO:0017053 "transcriptional repressor
            complex" evidence=IEA] [GO:0016580 "Sin3 complex" evidence=IEA]
            [GO:0014898 "cardiac muscle hypertrophy in response to stress"
            evidence=IEA] [GO:0010667 "negative regulation of cardiac muscle
            cell apoptotic process" evidence=IEA] [GO:0010460 "positive
            regulation of heart rate" evidence=IEA] [GO:0009948
            "anterior/posterior axis specification" evidence=IEA] [GO:0007219
            "Notch signaling pathway" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0003222 "ventricular trabecula myocardium
            morphogenesis" evidence=IEA] [GO:0003215 "cardiac right ventricle
            morphogenesis" evidence=IEA] [GO:0003214 "cardiac left ventricle
            morphogenesis" evidence=IEA] [GO:0003199 "endocardial cushion to
            mesenchymal transition involved in heart valve formation"
            evidence=IEA] [GO:0003195 "tricuspid valve formation" evidence=IEA]
            [GO:0003184 "pulmonary valve morphogenesis" evidence=IEA]
            [GO:0003171 "atrioventricular valve development" evidence=IEA]
            [GO:0003151 "outflow tract morphogenesis" evidence=IEA] [GO:0003150
            "muscular septum morphogenesis" evidence=IEA] [GO:0001570
            "vasculogenesis" evidence=IEA] [GO:0001102 "RNA polymerase II
            activating transcription factor binding" evidence=IEA] [GO:0000988
            "protein binding transcription factor activity" evidence=IEA]
            [GO:0000983 "RNA polymerase II core promoter sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0046983
            "protein dimerization activity" evidence=IEA] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 GO:GO:0005737 GO:GO:0017053
            GO:GO:0043565 GO:GO:0007219 GO:GO:0060840 GO:GO:0010460
            GO:GO:0001570 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0014898
            GO:GO:0009948 GO:GO:0000983 GO:GO:0045165 GO:GO:0090102
            GO:GO:0055015 InterPro:IPR018352 SMART:SM00511 GO:GO:0060045
            GO:GO:0045746 GO:GO:0060633 GO:GO:0016580 GO:GO:0003222
            GeneTree:ENSGT00700000104130 GO:GO:0003199 GO:GO:0065004
            GO:GO:0003195 GO:GO:0010667 KO:K09091 GO:GO:2000820 CTD:23493
            OMA:TCASQRE GO:GO:0003171 GO:GO:0060948 GO:GO:0060977 GO:GO:0045607
            EMBL:CU464159 RefSeq:NP_001230258.1 UniGene:Ssc.24610
            Ensembl:ENSSSCT00000004668 GeneID:100152404 KEGG:ssc:100152404
            Uniprot:F1S2V4
        Length = 337

 Score = 156 (60.0 bits), Expect = 8.1e-11, P = 8.1e-11
 Identities = 36/101 (35%), Positives = 60/101 (59%)

Query:     3 TLSIEVVYPEVMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVR 62
             T + +++  +  + ++E++RR RIN  L EL+ ++ T+ + +G   +KLEKA+IL++TV 
Sbjct:    41 TTTSQIMARKKRRGIIEKRRRDRINNSLSELRRLVPTAFEKQGS--AKLEKAEILQMTVD 98

Query:    63 HLHKLRRQQSLGLTPEAAYA-DRFKAGFTHCAAEVSQYLAS 102
             HL  L+     G     A A D    GF  C  EV++YL+S
Sbjct:    99 HLKMLQATGGKGYFDAHALAMDFMSIGFRECLTEVARYLSS 139


>UNIPROTKB|Q5TF93 [details] [associations]
            symbol:HEY2 "Hairy/enhancer-of-split-related with YRPW
            motif protein 2" species:9606 "Homo sapiens" [GO:0046983 "protein
            dimerization activity" evidence=IEA] [GO:0000983 "RNA polymerase II
            core promoter sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0000988 "protein binding transcription
            factor activity" evidence=IEA] [GO:0001570 "vasculogenesis"
            evidence=IEA] [GO:0003150 "muscular septum morphogenesis"
            evidence=IEA] [GO:0003151 "outflow tract morphogenesis"
            evidence=IEA] [GO:0003171 "atrioventricular valve development"
            evidence=IEA] [GO:0003184 "pulmonary valve morphogenesis"
            evidence=IEA] [GO:0003195 "tricuspid valve formation" evidence=IEA]
            [GO:0003199 "endocardial cushion to mesenchymal transition involved
            in heart valve formation" evidence=IEA] [GO:0003214 "cardiac left
            ventricle morphogenesis" evidence=IEA] [GO:0003215 "cardiac right
            ventricle morphogenesis" evidence=IEA] [GO:0003222 "ventricular
            trabecula myocardium morphogenesis" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0007219 "Notch signaling pathway" evidence=IEA] [GO:0008134
            "transcription factor binding" evidence=IEA] [GO:0009948
            "anterior/posterior axis specification" evidence=IEA] [GO:0010460
            "positive regulation of heart rate" evidence=IEA] [GO:0010667
            "negative regulation of cardiac muscle cell apoptotic process"
            evidence=IEA] [GO:0014898 "cardiac muscle hypertrophy in response
            to stress" evidence=IEA] [GO:0035910 "ascending aorta
            morphogenesis" evidence=IEA] [GO:0035912 "dorsal aorta
            morphogenesis" evidence=IEA] [GO:0035939 "microsatellite binding"
            evidence=IEA] [GO:0036304 "umbilical cord morphogenesis"
            evidence=IEA] [GO:0045165 "cell fate commitment" evidence=IEA]
            [GO:0045607 "regulation of auditory receptor cell differentiation"
            evidence=IEA] [GO:0045746 "negative regulation of Notch signaling
            pathway" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0055015 "ventricular cardiac muscle cell development"
            evidence=IEA] [GO:0060045 "positive regulation of cardiac muscle
            cell proliferation" evidence=IEA] [GO:0060347 "heart trabecula
            formation" evidence=IEA] [GO:0060413 "atrial septum morphogenesis"
            evidence=IEA] [GO:0060716 "labyrinthine layer blood vessel
            development" evidence=IEA] [GO:0060842 "arterial endothelial cell
            differentiation" evidence=IEA] [GO:0060948 "cardiac vascular smooth
            muscle cell development" evidence=IEA] [GO:0060977 "coronary
            vasculature morphogenesis" evidence=IEA] [GO:0061156 "pulmonary
            artery morphogenesis" evidence=IEA] [GO:0065004 "protein-DNA
            complex assembly" evidence=IEA] [GO:0090102 "cochlea development"
            evidence=IEA] [GO:2000678 "negative regulation of transcription
            regulatory region DNA binding" evidence=IEA] [GO:2000820 "negative
            regulation of transcription from RNA polymerase II promoter
            involved in smooth muscle cell differentiation" evidence=IEA]
            [GO:2001212 "regulation of vasculogenesis" evidence=IEA]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 GO:GO:0005634
            GO:GO:0005737 GO:GO:0003677 GO:GO:0007219 GO:GO:0060840
            GO:GO:0010460 GO:GO:0001570 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GO:GO:0014898 GO:GO:0009948 GO:GO:0000983 GO:GO:0045165
            GO:GO:0090102 GO:GO:0055015 InterPro:IPR018352 SMART:SM00511
            GO:GO:0060045 GO:GO:0045746 GO:GO:0003222 GO:GO:0003199
            GO:GO:0065004 GO:GO:0003195 GO:GO:0010667 HOGENOM:HOG000286035
            HOVERGEN:HBG003275 GO:GO:2000820 EMBL:AL078594 UniGene:Hs.144287
            HGNC:HGNC:4881 GO:GO:0003171 GO:GO:0060948 GO:GO:0060977
            GO:GO:0045607 IPI:IPI00643805 SMR:Q5TF93 STRING:Q5TF93
            Ensembl:ENST00000368365 Uniprot:Q5TF93
        Length = 291

 Score = 153 (58.9 bits), Expect = 1.1e-10, P = 1.1e-10
 Identities = 35/87 (40%), Positives = 53/87 (60%)

Query:    17 MLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRRQQSLGLT 76
             ++E++RR RIN  L EL+ ++ T+ + +G   +KLEKA+IL++TV HL  L+     G  
Sbjct:     9 IIEKRRRDRINNSLSELRRLVPTAFEKQGS--AKLEKAEILQMTVDHLKMLQATGGKGYF 66

Query:    77 PEAAYA-DRFKAGFTHCAAEVSQYLAS 102
                A A D    GF  C  EV++YL+S
Sbjct:    67 DAHALAMDFMSIGFRECLTEVARYLSS 93


>WB|WBGene00003008 [details] [associations]
            symbol:lin-22 species:6239 "Caenorhabditis elegans"
            [GO:0046983 "protein dimerization activity" evidence=IEA]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=IMP] [GO:0009957 "epidermal cell fate specification"
            evidence=IMP] [GO:0045138 "tail tip morphogenesis" evidence=IMP]
            [GO:0010629 "negative regulation of gene expression" evidence=IMP]
            [GO:0000981 "sequence-specific DNA binding RNA polymerase II
            transcription factor activity" evidence=ISS] [GO:0005634 "nucleus"
            evidence=ISS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
            SMART:SM00353 GO:GO:0005634 GO:GO:0009952 GO:GO:0000981
            GO:GO:0010629 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0045138
            HSSP:P61244 GO:GO:0009957 EMBL:FO081809 EMBL:AF020555 PIR:T42235
            RefSeq:NP_500281.1 UniGene:Cel.19687 ProteinModelPortal:G5EF76
            SMR:G5EF76 EnsemblMetazoa:Y54G2A.1 GeneID:177082
            KEGG:cel:CELE_Y54G2A.1 CTD:177082 WormBase:Y54G2A.1 OMA:TMESKPI
            NextBio:895262 Uniprot:G5EF76
        Length = 173

 Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
 Identities = 30/66 (45%), Positives = 43/66 (65%)

Query:    15 KPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRRQQSLG 74
             KP++E+KRRARIN+ L +LK+I++          SK EKADILE+ V +L +LR  Q   
Sbjct:    26 KPLMEKKRRARINKSLSQLKQILIQDEHKNSIQHSKWEKADILEMAVEYLQQLRSAQPCS 85

Query:    75 LTPEAA 80
             L+P  +
Sbjct:    86 LSPSTS 91


>UNIPROTKB|G5EF76 [details] [associations]
            symbol:lin-22 "Protein LIN-22" species:6239 "Caenorhabditis
            elegans" [GO:0006366 "transcription from RNA polymerase II
            promoter" evidence=ISS] [GO:0006357 "regulation of transcription
            from RNA polymerase II promoter" evidence=ISS] InterPro:IPR011598
            Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
            GO:GO:0009952 GO:GO:0000981 GO:GO:0010629 Gene3D:4.10.280.10
            SUPFAM:SSF47459 GO:GO:0045138 HSSP:P61244 GO:GO:0009957
            EMBL:FO081809 EMBL:AF020555 PIR:T42235 RefSeq:NP_500281.1
            UniGene:Cel.19687 ProteinModelPortal:G5EF76 SMR:G5EF76
            EnsemblMetazoa:Y54G2A.1 GeneID:177082 KEGG:cel:CELE_Y54G2A.1
            CTD:177082 WormBase:Y54G2A.1 OMA:TMESKPI NextBio:895262
            Uniprot:G5EF76
        Length = 173

 Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
 Identities = 30/66 (45%), Positives = 43/66 (65%)

Query:    15 KPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRRQQSLG 74
             KP++E+KRRARIN+ L +LK+I++          SK EKADILE+ V +L +LR  Q   
Sbjct:    26 KPLMEKKRRARINKSLSQLKQILIQDEHKNSIQHSKWEKADILEMAVEYLQQLRSAQPCS 85

Query:    75 LTPEAA 80
             L+P  +
Sbjct:    86 LSPSTS 91


>ZFIN|ZDB-GENE-040824-5 [details] [associations]
            symbol:her12 "hairy-related 12" species:7955 "Danio
            rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0046983 "protein dimerization activity" evidence=IEA]
            [GO:0001756 "somitogenesis" evidence=IMP] [GO:0007219 "Notch
            signaling pathway" evidence=IGI] [GO:0007420 "brain development"
            evidence=IMP] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 ZFIN:ZDB-GENE-040824-5 GO:GO:0005634
            GO:GO:0007420 GO:GO:0006355 GO:GO:0003677 GO:GO:0007219
            GO:GO:0006351 GO:GO:0001756 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GeneTree:ENSGT00700000104168 HOVERGEN:HBG005960 KO:K06055
            EMBL:CU062502 EMBL:AY426713 IPI:IPI00481696 RefSeq:NP_991182.1
            UniGene:Dr.29089 Ensembl:ENSDART00000044080
            Ensembl:ENSDART00000112929 GeneID:402914 KEGG:dre:402914 CTD:402914
            InParanoid:Q6TA36 OMA:SHCWRES NextBio:20816727 Uniprot:Q6TA36
        Length = 155

 Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
 Identities = 39/112 (34%), Positives = 63/112 (56%)

Query:    12 EVMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHL-HKLRRQ 70
             ++ KP++E+ RR RIN C+D+LK ++     +   + +KLEKADILE+TV  L  ++++Q
Sbjct:    23 KLRKPIVEKMRRDRINTCIDQLKSLLEKEFHSHDPS-TKLEKADILEMTVSFLKQQIKQQ 81

Query:    71 QSLGLTPEAAYADRFKAGFTHCAAEVSQYL-----ASSMQQHQQQPSTEPTI 117
             Q +   P+    D F  G++HC  E   +L     A  +Q     P T  T+
Sbjct:    82 QQI---PQR---D-FNEGYSHCWRESVHFLSLHSNAGELQHLHSGPKTNSTM 126


>ZFIN|ZDB-GENE-000526-1 [details] [associations]
            symbol:hey2 "hairy/enhancer-of-split related with
            YRPW motif 2" species:7955 "Danio rerio" [GO:0046983 "protein
            dimerization activity" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0048514 "blood vessel
            morphogenesis" evidence=IMP] [GO:0035912 "dorsal aorta
            morphogenesis" evidence=IMP] [GO:0001568 "blood vessel development"
            evidence=IMP] [GO:0060853 "Notch signaling pathway involved in
            arterial endothelial cell fate commitment" evidence=IMP]
            [GO:0001570 "vasculogenesis" evidence=IMP] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0007219 "Notch signaling pathway"
            evidence=IEA] [GO:0048844 "artery morphogenesis" evidence=IMP]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=IGI] [GO:0007507 "heart development" evidence=IMP]
            [GO:0005515 "protein binding" evidence=IPI] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 ZFIN:ZDB-GENE-000526-1 GO:GO:0005634
            GO:GO:0045892 GO:GO:0007507 GO:GO:0003677 GO:GO:0006351
            GO:GO:0001570 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR018352
            SMART:SM00511 GO:GO:0035912 GeneTree:ENSGT00700000104130
            HOGENOM:HOG000286035 HOVERGEN:HBG003275 KO:K09091 OrthoDB:EOG4GB77H
            EMBL:AF237948 EMBL:BC114263 IPI:IPI00502870 RefSeq:NP_571697.2
            UniGene:Dr.81319 ProteinModelPortal:Q9I9L0 SMR:Q9I9L0
            DIP:DIP-46472N STRING:Q9I9L0 Ensembl:ENSDART00000023531
            GeneID:58146 KEGG:dre:58146 CTD:23493 eggNOG:NOG324798
            InParanoid:Q9I9L0 OMA:TCASQRE NextBio:20892394 ArrayExpress:Q9I9L0
            Bgee:Q9I9L0 GO:GO:0060853 Uniprot:Q9I9L0
        Length = 324

 Score = 154 (59.3 bits), Expect = 1.2e-10, P = 1.2e-10
 Identities = 36/101 (35%), Positives = 60/101 (59%)

Query:     3 TLSIEVVYPEVMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVR 62
             T + +V+  +  + ++E++RR RIN  L EL+ ++ T+ + +G   +KLEKA+IL++TV 
Sbjct:    41 TTTSQVMARKKRRGIIEKRRRDRINNSLSELRRLVPTAFEKQGS--AKLEKAEILQMTVD 98

Query:    63 HLHKLRRQQSLGLTPEAAYA-DRFKAGFTHCAAEVSQYLAS 102
             HL  L+     G     + A D    GF  C  EV++YL+S
Sbjct:    99 HLKMLQATGGKGYFDAHSLAMDFLSIGFRECLTEVARYLSS 139


>MGI|MGI:1341800 [details] [associations]
            symbol:Hey1 "hairy/enhancer-of-split related with YRPW motif
            1" species:10090 "Mus musculus" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter"
            evidence=ISO;IMP;IDA] [GO:0000983 "RNA polymerase II core promoter
            sequence-specific DNA binding transcription factor activity"
            evidence=IDA] [GO:0000988 "protein binding transcription factor
            activity" evidence=ISO;IDA] [GO:0001078 "RNA polymerase II core
            promoter proximal region sequence-specific DNA binding
            transcription factor activity involved in negative regulation of
            transcription" evidence=IDA] [GO:0001568 "blood vessel development"
            evidence=IGI] [GO:0001570 "vasculogenesis" evidence=IGI]
            [GO:0002076 "osteoblast development" evidence=IGI] [GO:0003151
            "outflow tract morphogenesis" evidence=IGI] [GO:0003181
            "atrioventricular valve morphogenesis" evidence=IGI] [GO:0003184
            "pulmonary valve morphogenesis" evidence=IGI] [GO:0003190
            "atrioventricular valve formation" evidence=IMP] [GO:0003198
            "epithelial to mesenchymal transition involved in endocardial
            cushion formation" evidence=IGI] [GO:0003199 "endocardial cushion
            to mesenchymal transition involved in heart valve formation"
            evidence=IGI] [GO:0003203 "endocardial cushion morphogenesis"
            evidence=IGI] [GO:0003208 "cardiac ventricle morphogenesis"
            evidence=IMP] [GO:0003222 "ventricular trabecula myocardium
            morphogenesis" evidence=IGI] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISO;ISS] [GO:0005515
            "protein binding" evidence=IPI] [GO:0005634 "nucleus"
            evidence=ISO;ISS;IDA] [GO:0005737 "cytoplasm" evidence=IDA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=ISS] [GO:0007219 "Notch signaling pathway"
            evidence=ISO;IDA;TAS] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0009948 "anterior/posterior axis
            specification" evidence=IGI] [GO:0010629 "negative regulation of
            gene expression" evidence=IMP;IDA] [GO:0014031 "mesenchymal cell
            development" evidence=IGI] [GO:0035912 "dorsal aorta morphogenesis"
            evidence=IGI] [GO:0035939 "microsatellite binding"
            evidence=ISO;IDA] [GO:0036304 "umbilical cord morphogenesis"
            evidence=IGI] [GO:0043565 "sequence-specific DNA binding"
            evidence=IDA] [GO:0045665 "negative regulation of neuron
            differentiation" evidence=IMP] [GO:0045669 "positive regulation of
            osteoblast differentiation" evidence=IGI] [GO:0045746 "negative
            regulation of Notch signaling pathway" evidence=ISO] [GO:0045892
            "negative regulation of transcription, DNA-dependent"
            evidence=ISO;IMP] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IGI;IMP] [GO:0046983
            "protein dimerization activity" evidence=IEA] [GO:0060317 "cardiac
            epithelial to mesenchymal transition" evidence=IGI] [GO:0060411
            "cardiac septum morphogenesis" evidence=IMP] [GO:0060412
            "ventricular septum morphogenesis" evidence=IGI] [GO:0060716
            "labyrinthine layer blood vessel development" evidence=IGI]
            [GO:0060840 "artery development" evidence=IGI] [GO:0060842
            "arterial endothelial cell differentiation" evidence=IGI]
            [GO:0061314 "Notch signaling involved in heart development"
            evidence=IC] [GO:2000678 "negative regulation of transcription
            regulatory region DNA binding" evidence=ISO] [GO:2000820 "negative
            regulation of transcription from RNA polymerase II promoter
            involved in smooth muscle cell differentiation" evidence=ISO]
            [GO:2001212 "regulation of vasculogenesis" evidence=IGI]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 MGI:MGI:1341800
            GO:GO:0005737 GO:GO:0005654 GO:GO:0001078 GO:GO:0045944
            GO:GO:0045665 Reactome:REACT_115202 GO:GO:0002076 GO:GO:0045669
            GO:GO:0001570 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0060716
            GO:GO:0009948 GO:GO:0003151 GO:GO:0000983 InterPro:IPR018352
            SMART:SM00511 GO:GO:0060675 GO:GO:0060412 GO:GO:0000988
            GO:GO:0061314 GO:GO:0035912 GO:GO:0003222 GO:GO:0003199
            GO:GO:0003198 GO:GO:0003190 GO:GO:0072049 GO:GO:0072050
            eggNOG:NOG241271 HOGENOM:HOG000286035 HOVERGEN:HBG003275
            OrthoDB:EOG4GB77H GO:GO:0035939 GO:GO:0060842 GO:GO:0003184
            GO:GO:2001212 GO:GO:0036304 EMBL:AF151521 IPI:IPI00125503
            UniGene:Mm.29581 ProteinModelPortal:Q9WV93 SMR:Q9WV93 IntAct:Q9WV93
            STRING:Q9WV93 PhosphoSite:Q9WV93 PRIDE:Q9WV93 InParanoid:Q9WV93
            CleanEx:MM_HEY1 Genevestigator:Q9WV93 GermOnline:ENSMUSG00000040289
            GO:GO:0072087 Uniprot:Q9WV93
        Length = 299

 Score = 153 (58.9 bits), Expect = 1.2e-10, P = 1.2e-10
 Identities = 36/100 (36%), Positives = 61/100 (61%)

Query:     3 TLSIEVVYPEVMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVR 62
             T S +V+  +  + ++E++RR RIN  L EL+ ++ ++ + +G   +KLEKA+IL++TV 
Sbjct:    42 TTSSQVLARKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQGS--AKLEKAEILQMTVD 99

Query:    63 HLHKLRRQQSLGLTPEAAYADRFKA-GFTHCAAEVSQYLA 101
             HL  L      G     A A  +++ GF  C AEV++YL+
Sbjct:   100 HLKMLHTAGGKGYFDAHALAMDYRSLGFRECLAEVARYLS 139


>UNIPROTKB|Q2KIN4 [details] [associations]
            symbol:HEY1 "Hairy/enhancer-of-split related with YRPW
            motif protein 1" species:9913 "Bos taurus" [GO:0003198 "epithelial
            to mesenchymal transition involved in endocardial cushion
            formation" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
            [GO:2000820 "negative regulation of transcription from RNA
            polymerase II promoter involved in smooth muscle cell
            differentiation" evidence=IEA] [GO:2000678 "negative regulation of
            transcription regulatory region DNA binding" evidence=IEA]
            [GO:0060840 "artery development" evidence=IEA] [GO:0045746
            "negative regulation of Notch signaling pathway" evidence=IEA]
            [GO:0045669 "positive regulation of osteoblast differentiation"
            evidence=IEA] [GO:0035939 "microsatellite binding" evidence=IEA]
            [GO:0009948 "anterior/posterior axis specification" evidence=IEA]
            [GO:0007219 "Notch signaling pathway" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0003222 "ventricular trabecula myocardium
            morphogenesis" evidence=IEA] [GO:0003199 "endocardial cushion to
            mesenchymal transition involved in heart valve formation"
            evidence=IEA] [GO:0002076 "osteoblast development" evidence=IEA]
            [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0001525
            "angiogenesis" evidence=IEA] [GO:0000988 "protein binding
            transcription factor activity" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
            dimerization activity" evidence=IEA] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 GO:GO:0005634 GO:GO:0007219
            GO:GO:0003700 GO:GO:0006351 GO:GO:0001525 GO:GO:0002076
            GO:GO:0060840 GO:GO:0045669 GO:GO:0001570 Gene3D:4.10.280.10
            SUPFAM:SSF47459 GO:GO:0009948 InterPro:IPR018352 SMART:SM00511
            GO:GO:0045746 GO:GO:0000988 GO:GO:0003222
            GeneTree:ENSGT00700000104130 GO:GO:0003199 GO:GO:0003198
            GO:GO:2000678 EMBL:BC112574 IPI:IPI00702797 RefSeq:NP_001001172.2
            UniGene:Bt.59697 ProteinModelPortal:Q2KIN4 SMR:Q2KIN4
            Ensembl:ENSBTAT00000020864 GeneID:408005 KEGG:bta:408005 CTD:23462
            eggNOG:NOG241271 HOGENOM:HOG000286035 HOVERGEN:HBG003275
            InParanoid:Q2KIN4 KO:K09091 OMA:AHPDYSS OrthoDB:EOG4GB77H
            NextBio:20818624 GO:GO:0035939 GO:GO:2000820 Uniprot:Q2KIN4
        Length = 304

 Score = 152 (58.6 bits), Expect = 1.7e-10, P = 1.7e-10
 Identities = 35/100 (35%), Positives = 61/100 (61%)

Query:     3 TLSIEVVYPEVMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVR 62
             T S +++  +  + ++E++RR RIN  L EL+ ++ ++ + +G   +KLEKA+IL++TV 
Sbjct:    42 TTSSQILARKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQGS--AKLEKAEILQMTVD 99

Query:    63 HLHKLRRQQSLGLTPEAAYADRFKA-GFTHCAAEVSQYLA 101
             HL  L      G     A A  +++ GF  C AEV++YL+
Sbjct:   100 HLKMLHTAGGKGYFDAHALAMDYRSLGFRECLAEVARYLS 139


>UNIPROTKB|G1K293 [details] [associations]
            symbol:HEY1 "Hairy/enhancer-of-split-related with YRPW
            motif protein 1" species:9615 "Canis lupus familiaris" [GO:2000820
            "negative regulation of transcription from RNA polymerase II
            promoter involved in smooth muscle cell differentiation"
            evidence=IEA] [GO:2000678 "negative regulation of transcription
            regulatory region DNA binding" evidence=IEA] [GO:0060840 "artery
            development" evidence=IEA] [GO:0045746 "negative regulation of
            Notch signaling pathway" evidence=IEA] [GO:0045669 "positive
            regulation of osteoblast differentiation" evidence=IEA] [GO:0035939
            "microsatellite binding" evidence=IEA] [GO:0009948
            "anterior/posterior axis specification" evidence=IEA] [GO:0007219
            "Notch signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0003222
            "ventricular trabecula myocardium morphogenesis" evidence=IEA]
            [GO:0003199 "endocardial cushion to mesenchymal transition involved
            in heart valve formation" evidence=IEA] [GO:0003198 "epithelial to
            mesenchymal transition involved in endocardial cushion formation"
            evidence=IEA] [GO:0002076 "osteoblast development" evidence=IEA]
            [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0001525
            "angiogenesis" evidence=IEA] [GO:0000988 "protein binding
            transcription factor activity" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
            dimerization activity" evidence=IEA] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 GO:GO:0005634 GO:GO:0007219
            GO:GO:0003700 GO:GO:0006351 GO:GO:0001525 GO:GO:0002076
            GO:GO:0060840 GO:GO:0045669 GO:GO:0001570 Gene3D:4.10.280.10
            SUPFAM:SSF47459 GO:GO:0009948 InterPro:IPR018352 SMART:SM00511
            GO:GO:0045746 GO:GO:0000988 GO:GO:0003222
            GeneTree:ENSGT00700000104130 GO:GO:0003199 GO:GO:0003198
            GO:GO:2000678 OMA:AHPDYSS GO:GO:0035939 GO:GO:2000820
            EMBL:AAEX03015894 Ensembl:ENSCAFT00000013332 Uniprot:G1K293
        Length = 304

 Score = 152 (58.6 bits), Expect = 1.7e-10, P = 1.7e-10
 Identities = 35/100 (35%), Positives = 61/100 (61%)

Query:     3 TLSIEVVYPEVMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVR 62
             T S +++  +  + ++E++RR RIN  L EL+ ++ ++ + +G   +KLEKA+IL++TV 
Sbjct:    42 TTSSQILARKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQGS--AKLEKAEILQMTVD 99

Query:    63 HLHKLRRQQSLGLTPEAAYADRFKA-GFTHCAAEVSQYLA 101
             HL  L      G     A A  +++ GF  C AEV++YL+
Sbjct:   100 HLKMLHTAGGKGYFDAHALAMDYRSLGFRECLAEVARYLS 139


>UNIPROTKB|Q9TSZ2 [details] [associations]
            symbol:HEY1 "Hairy/enhancer-of-split related with YRPW
            motif protein 1" species:9615 "Canis lupus familiaris" [GO:0003198
            "epithelial to mesenchymal transition involved in endocardial
            cushion formation" evidence=ISS] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
            "protein dimerization activity" evidence=IEA] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 GO:GO:0005634 GO:GO:0006355
            GO:GO:0003677 GO:GO:0007219 GO:GO:0006351 Gene3D:4.10.280.10
            SUPFAM:SSF47459 InterPro:IPR018352 SMART:SM00511 GO:GO:0003198
            CTD:23462 eggNOG:NOG241271 HOGENOM:HOG000286035 HOVERGEN:HBG003275
            KO:K09091 OrthoDB:EOG4GB77H EMBL:AJ388551 RefSeq:NP_001002953.1
            UniGene:Cfa.121 ProteinModelPortal:Q9TSZ2 SMR:Q9TSZ2 STRING:Q9TSZ2
            GeneID:403420 KEGG:cfa:403420 InParanoid:Q9TSZ2 NextBio:20816940
            Uniprot:Q9TSZ2
        Length = 304

 Score = 152 (58.6 bits), Expect = 1.7e-10, P = 1.7e-10
 Identities = 35/100 (35%), Positives = 61/100 (61%)

Query:     3 TLSIEVVYPEVMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVR 62
             T S +++  +  + ++E++RR RIN  L EL+ ++ ++ + +G   +KLEKA+IL++TV 
Sbjct:    42 TTSSQILARKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQGS--AKLEKAEILQMTVD 99

Query:    63 HLHKLRRQQSLGLTPEAAYADRFKA-GFTHCAAEVSQYLA 101
             HL  L      G     A A  +++ GF  C AEV++YL+
Sbjct:   100 HLKMLHTAGGKGYFDAHALAMDYRSLGFRECLAEVARYLS 139


>UNIPROTKB|Q9Y5J3 [details] [associations]
            symbol:HEY1 "Hairy/enhancer-of-split related with YRPW
            motif protein 1" species:9606 "Homo sapiens" [GO:0046983 "protein
            dimerization activity" evidence=IEA] [GO:0001570 "vasculogenesis"
            evidence=IEA] [GO:0002076 "osteoblast development" evidence=IEA]
            [GO:0003199 "endocardial cushion to mesenchymal transition involved
            in heart valve formation" evidence=IEA] [GO:0003222 "ventricular
            trabecula myocardium morphogenesis" evidence=IEA] [GO:0009948
            "anterior/posterior axis specification" evidence=IEA] [GO:0045669
            "positive regulation of osteoblast differentiation" evidence=IEA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IMP;IDA] [GO:0005737 "cytoplasm"
            evidence=ISS] [GO:0007219 "Notch signaling pathway"
            evidence=IDA;TAS] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=IDA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0003198 "epithelial to mesenchymal transition involved in
            endocardial cushion formation" evidence=ISS] [GO:0000988 "protein
            binding transcription factor activity" evidence=IDA] [GO:0005634
            "nucleus" evidence=ISS] [GO:0035939 "microsatellite binding"
            evidence=IDA] [GO:0001525 "angiogenesis" evidence=IEP] [GO:0008134
            "transcription factor binding" evidence=NAS] [GO:0000983 "RNA
            polymerase II core promoter sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0045746 "negative
            regulation of Notch signaling pathway" evidence=IDA] [GO:2000678
            "negative regulation of transcription regulatory region DNA
            binding" evidence=IDA] [GO:0060347 "heart trabecula formation"
            evidence=ISS] [GO:0060411 "cardiac septum morphogenesis"
            evidence=ISS] [GO:0003190 "atrioventricular valve formation"
            evidence=ISS] [GO:0061314 "Notch signaling involved in heart
            development" evidence=IC] [GO:0035912 "dorsal aorta morphogenesis"
            evidence=ISS] [GO:0060842 "arterial endothelial cell
            differentiation" evidence=ISS] [GO:0060716 "labyrinthine layer
            blood vessel development" evidence=ISS] [GO:2001212 "regulation of
            vasculogenesis" evidence=ISS] [GO:0036304 "umbilical cord
            morphogenesis" evidence=ISS] [GO:0003184 "pulmonary valve
            morphogenesis" evidence=ISS] [GO:0003203 "endocardial cushion
            morphogenesis" evidence=ISS] [GO:0003208 "cardiac ventricle
            morphogenesis" evidence=ISS] [GO:0060317 "cardiac epithelial to
            mesenchymal transition" evidence=ISS] [GO:0060412 "ventricular
            septum morphogenesis" evidence=ISS] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=ISS] [GO:2000820 "negative regulation of transcription
            from RNA polymerase II promoter involved in smooth muscle cell
            differentiation" evidence=IDA] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 GO:GO:0005634 GO:GO:0005737
            Reactome:REACT_111102 GO:GO:0045944 GO:GO:0001525 GO:GO:0002076
            GO:GO:0045669 GO:GO:0001570 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GO:GO:0008134 GO:GO:0060716 GO:GO:0009948 GO:GO:0000983
            EMBL:CH471068 GO:GO:0060347 InterPro:IPR018352 SMART:SM00511
            GO:GO:0045746 GO:GO:0060412 GO:GO:0000988 GO:GO:0061314
            GO:GO:0035912 GO:GO:0003222 GO:GO:0003199 GO:GO:0003198
            GO:GO:2000678 GO:GO:0003190 CTD:23462 eggNOG:NOG241271
            HOGENOM:HOG000286035 HOVERGEN:HBG003275 KO:K09091 OMA:AHPDYSS
            OrthoDB:EOG4GB77H GO:GO:0035939 GO:GO:2000820 EMBL:AF151522
            EMBL:AF176422 EMBL:AJ272214 EMBL:AF232239 EMBL:AF311883
            EMBL:BT020065 EMBL:AK092437 EMBL:AK313271 EMBL:AC016240
            EMBL:BC001873 IPI:IPI00550054 IPI:IPI00742738 RefSeq:NP_001035798.1
            RefSeq:NP_036390.3 UniGene:Hs.234434 PDB:2DB7 PDBsum:2DB7
            ProteinModelPortal:Q9Y5J3 SMR:Q9Y5J3 MINT:MINT-1179634
            STRING:Q9Y5J3 PhosphoSite:Q9Y5J3 DMDM:13124298 PRIDE:Q9Y5J3
            DNASU:23462 Ensembl:ENST00000337919 Ensembl:ENST00000354724
            Ensembl:ENST00000542205 GeneID:23462 KEGG:hsa:23462 UCSC:uc003ybl.3
            UCSC:uc003ybm.3 GeneCards:GC08M080676 HGNC:HGNC:4880 MIM:602953
            neXtProt:NX_Q9Y5J3 PharmGKB:PA29258 ChiTaRS:HEY1
            EvolutionaryTrace:Q9Y5J3 GenomeRNAi:23462 NextBio:45771
            ArrayExpress:Q9Y5J3 Bgee:Q9Y5J3 CleanEx:HS_HEY1
            Genevestigator:Q9Y5J3 GermOnline:ENSG00000164683 GO:GO:0060842
            GO:GO:0003208 GO:GO:0003184 GO:GO:2001212 GO:GO:0036304
            Uniprot:Q9Y5J3
        Length = 304

 Score = 152 (58.6 bits), Expect = 1.7e-10, P = 1.7e-10
 Identities = 35/100 (35%), Positives = 61/100 (61%)

Query:     3 TLSIEVVYPEVMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVR 62
             T S +++  +  + ++E++RR RIN  L EL+ ++ ++ + +G   +KLEKA+IL++TV 
Sbjct:    42 TTSSQILARKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQGS--AKLEKAEILQMTVD 99

Query:    63 HLHKLRRQQSLGLTPEAAYADRFKA-GFTHCAAEVSQYLA 101
             HL  L      G     A A  +++ GF  C AEV++YL+
Sbjct:   100 HLKMLHTAGGKGYFDAHALAMDYRSLGFRECLAEVARYLS 139


>UNIPROTKB|F1RWM2 [details] [associations]
            symbol:HEY1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0003198 "epithelial to mesenchymal transition involved
            in endocardial cushion formation" evidence=ISS] [GO:2000820
            "negative regulation of transcription from RNA polymerase II
            promoter involved in smooth muscle cell differentiation"
            evidence=IEA] [GO:2000678 "negative regulation of transcription
            regulatory region DNA binding" evidence=IEA] [GO:0060840 "artery
            development" evidence=IEA] [GO:0045746 "negative regulation of
            Notch signaling pathway" evidence=IEA] [GO:0045669 "positive
            regulation of osteoblast differentiation" evidence=IEA] [GO:0035939
            "microsatellite binding" evidence=IEA] [GO:0009948
            "anterior/posterior axis specification" evidence=IEA] [GO:0007219
            "Notch signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0003222
            "ventricular trabecula myocardium morphogenesis" evidence=IEA]
            [GO:0003199 "endocardial cushion to mesenchymal transition involved
            in heart valve formation" evidence=IEA] [GO:0002076 "osteoblast
            development" evidence=IEA] [GO:0001570 "vasculogenesis"
            evidence=IEA] [GO:0001525 "angiogenesis" evidence=IEA] [GO:0000988
            "protein binding transcription factor activity" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0046983 "protein dimerization activity" evidence=IEA]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 GO:GO:0005634
            GO:GO:0007219 GO:GO:0003700 GO:GO:0006351 GO:GO:0001525
            GO:GO:0002076 GO:GO:0060840 GO:GO:0045669 GO:GO:0001570
            Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0009948 InterPro:IPR018352
            SMART:SM00511 GO:GO:0045746 GO:GO:0000988 GO:GO:0003222
            GeneTree:ENSGT00700000104130 GO:GO:0003199 GO:GO:0003198
            GO:GO:2000678 CTD:23462 KO:K09091 OMA:AHPDYSS GO:GO:0035939
            GO:GO:2000820 EMBL:CU151844 RefSeq:XP_001928567.2 UniGene:Ssc.95897
            Ensembl:ENSSSCT00000006753 GeneID:100157952 KEGG:ssc:100157952
            Uniprot:F1RWM2
        Length = 304

 Score = 152 (58.6 bits), Expect = 1.7e-10, P = 1.7e-10
 Identities = 35/100 (35%), Positives = 61/100 (61%)

Query:     3 TLSIEVVYPEVMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVR 62
             T S +++  +  + ++E++RR RIN  L EL+ ++ ++ + +G   +KLEKA+IL++TV 
Sbjct:    42 TTSSQILARKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQGS--AKLEKAEILQMTVD 99

Query:    63 HLHKLRRQQSLGLTPEAAYADRFKA-GFTHCAAEVSQYLA 101
             HL  L      G     A A  +++ GF  C AEV++YL+
Sbjct:   100 HLKMLHTAGGKGYFDAHALAMDYRSLGFRECLAEVARYLS 139


>UNIPROTKB|Q5RCB0 [details] [associations]
            symbol:DKFZp459C0535 "Putative uncharacterized protein
            DKFZp459C0535" species:9601 "Pongo abelii" [GO:0003198 "epithelial
            to mesenchymal transition involved in endocardial cushion
            formation" evidence=ISS] InterPro:IPR003650 InterPro:IPR011598
            Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054
            SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
            GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR018352
            SMART:SM00511 GO:GO:0003198 CTD:23462 HOGENOM:HOG000286035
            HOVERGEN:HBG003275 KO:K09091 EMBL:CR858367 RefSeq:NP_001125323.1
            UniGene:Pab.8969 ProteinModelPortal:Q5RCB0 SMR:Q5RCB0
            GeneID:100172222 KEGG:pon:100172222 InParanoid:Q5RCB0
            Uniprot:Q5RCB0
        Length = 304

 Score = 152 (58.6 bits), Expect = 1.7e-10, P = 1.7e-10
 Identities = 35/100 (35%), Positives = 61/100 (61%)

Query:     3 TLSIEVVYPEVMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVR 62
             T S +++  +  + ++E++RR RIN  L EL+ ++ ++ + +G   +KLEKA+IL++TV 
Sbjct:    42 TTSSQILARKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQGS--AKLEKAEILQMTVD 99

Query:    63 HLHKLRRQQSLGLTPEAAYADRFKA-GFTHCAAEVSQYLA 101
             HL  L      G     A A  +++ GF  C AEV++YL+
Sbjct:   100 HLKMLHTAGGKGYFDAHALAMDYRSLGFRECLAEVARYLS 139


>FB|FBgn0002631 [details] [associations]
            symbol:E(spl)m5-HLH "Enhancer of split m5, helix-loop-helix"
            species:7227 "Drosophila melanogaster" [GO:0046982 "protein
            heterodimerization activity" evidence=IPI] [GO:0005634 "nucleus"
            evidence=NAS;IDA] [GO:0001078 "RNA polymerase II core promoter
            proximal region sequence-specific DNA binding transcription factor
            activity involved in negative regulation of transcription"
            evidence=IDA] [GO:0042803 "protein homodimerization activity"
            evidence=IPI] [GO:0043565 "sequence-specific DNA binding"
            evidence=IDA] [GO:0007399 "nervous system development"
            evidence=NAS] [GO:0003677 "DNA binding" evidence=NAS] [GO:0045165
            "cell fate commitment" evidence=NAS] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=NAS]
            [GO:0048749 "compound eye development" evidence=TAS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=TAS] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] InterPro:IPR003650 InterPro:IPR011598
            Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054
            SMART:SM00353 EMBL:AE014297 GO:GO:0005634 GO:GO:0007399
            GO:GO:0030154 GO:GO:0001078 GO:GO:0043565 Gene3D:4.10.280.10
            SUPFAM:SSF47459 GO:GO:0048749 InterPro:IPR018352 SMART:SM00511
            GeneTree:ENSGT00700000104130 KO:K09090 EMBL:AY779906 EMBL:AY779907
            EMBL:AY779908 EMBL:AY779909 EMBL:AY779910 EMBL:AY779911
            EMBL:AY779912 EMBL:AY779913 EMBL:AY779914 EMBL:AY779915
            EMBL:AY779916 EMBL:AY779917 EMBL:AY779918 EMBL:AY779919
            EMBL:AY779920 EMBL:AY779921 EMBL:X16552 EMBL:AY070597 EMBL:AY906443
            EMBL:AY906444 EMBL:AY906445 EMBL:AY906446 EMBL:AY906447
            EMBL:AY906448 EMBL:AY906449 EMBL:AY906450 EMBL:AY906451
            EMBL:AY906452 EMBL:AY906453 EMBL:AY906454 EMBL:AY906455
            EMBL:AY906456 EMBL:AY906457 EMBL:AY906458 EMBL:AY906459
            EMBL:AY906460 EMBL:AY906461 EMBL:AY906462 EMBL:AY906463
            EMBL:AY906464 EMBL:AY906465 EMBL:AY906466 EMBL:AY906467
            EMBL:AY906468 EMBL:AY906469 EMBL:AY906470 EMBL:AY906471
            EMBL:AY906472 EMBL:AY906473 EMBL:AY906474 EMBL:AY906475
            EMBL:AY906476 EMBL:AY906477 EMBL:AY906478 EMBL:AY906479
            EMBL:AY906480 EMBL:AY906481 EMBL:AY906482 EMBL:AY906483
            EMBL:AY906484 EMBL:AY906485 EMBL:AY906486 EMBL:AY906487
            EMBL:AY906488 EMBL:AY906489 EMBL:AY906490 EMBL:AY906491
            EMBL:AY906492 EMBL:AY906493 EMBL:AY906494 EMBL:AY906495
            EMBL:AY906496 EMBL:AY906497 EMBL:AY906498 EMBL:AY906499
            EMBL:AY906500 EMBL:AY906501 EMBL:AY906502 EMBL:AY906503
            EMBL:AY906504 EMBL:AY906505 EMBL:AY906506 EMBL:AY906507
            EMBL:AY906508 EMBL:AY906509 EMBL:AY906510 EMBL:AY906511
            EMBL:AY906512 EMBL:AY906513 EMBL:AY906514 EMBL:AY906515
            EMBL:AY906516 EMBL:AY906517 EMBL:AY906518 EMBL:AY906519
            EMBL:AY906520 EMBL:AY906521 EMBL:AY906522 EMBL:AY906523
            EMBL:AY906524 EMBL:AY906525 EMBL:AY906526 EMBL:AY906527
            EMBL:AY906528 EMBL:AY906529 EMBL:AY906530 EMBL:AY906531
            EMBL:AY906532 EMBL:AY906533 EMBL:AY906534 EMBL:AY906535
            EMBL:AY906536 EMBL:AY906537 EMBL:AY906538 EMBL:AY906539
            EMBL:AY906540 EMBL:AY906541 EMBL:AY906542 EMBL:AY906543
            EMBL:AY906544 EMBL:AY906545 EMBL:AY906546 EMBL:AY906547
            EMBL:AY906548 EMBL:AY906549 EMBL:AY906550 EMBL:AY906551
            EMBL:AY906552 EMBL:AY906553 EMBL:AY906554 EMBL:AY906555
            EMBL:AY906556 EMBL:AY906557 EMBL:AY906558 EMBL:AY906559
            EMBL:AY906560 EMBL:AY906561 EMBL:AY906562 EMBL:AY906563
            EMBL:AY906564 EMBL:AY906565 EMBL:AY906566 EMBL:AY906567
            EMBL:AY906568 EMBL:AY906569 EMBL:AY906570 EMBL:AY906571
            EMBL:AY906572 EMBL:AY906573 EMBL:AY906574 EMBL:AY906575
            EMBL:AY906576 EMBL:AY906577 EMBL:AY906578 EMBL:AY906579
            EMBL:AY906580 EMBL:AY906581 EMBL:AY906582 EMBL:AY906583
            EMBL:AY906584 EMBL:AY906585 EMBL:AY906586 EMBL:AY906587
            EMBL:AY906588 EMBL:AY906589 EMBL:AY906590 EMBL:AY906591
            EMBL:AY906592 EMBL:AY906593 EMBL:AY906594 EMBL:AY906595
            EMBL:AY906596 EMBL:AY906597 EMBL:AY906598 EMBL:AY906599
            EMBL:AY906600 EMBL:AY906601 EMBL:AY906602 EMBL:AY906603
            EMBL:AY906604 EMBL:AY906605 EMBL:AY906606 EMBL:AY906607
            EMBL:AY906608 EMBL:AY906609 EMBL:AY906610 EMBL:AY906611
            EMBL:AY906612 EMBL:AY906613 EMBL:AY906614 EMBL:AY906615
            EMBL:AY906616 EMBL:AY906617 EMBL:AY906618 EMBL:AY906619
            EMBL:AY906620 EMBL:AY906621 EMBL:AY906622 EMBL:AY906623
            EMBL:AY906624 EMBL:AY906625 EMBL:AY906626 EMBL:AY906627
            EMBL:AY906628 EMBL:AY906629 EMBL:AY906630 EMBL:AY906631
            EMBL:AY906632 EMBL:AY906633 EMBL:AY906634 EMBL:AY906635
            EMBL:AY906636 EMBL:AY906637 EMBL:AY906638 EMBL:AY906639
            EMBL:AY906640 EMBL:AY906641 EMBL:AY906642 EMBL:AY906643
            EMBL:AY906644 EMBL:AY906645 EMBL:AY906646 EMBL:AY906647
            EMBL:AY906648 EMBL:AY906649 EMBL:AY906650 EMBL:AY906651
            EMBL:AY906652 EMBL:AY906653 EMBL:AY906654 EMBL:AY906655
            EMBL:AY906656 EMBL:AY906657 EMBL:AY906658 EMBL:AY906659
            EMBL:AY906660 EMBL:AY906661 EMBL:AY906662 EMBL:AY906663
            EMBL:AY906664 EMBL:AY906665 EMBL:AY906666 EMBL:AY906667
            EMBL:AY906668 EMBL:AY906669 EMBL:AY906670 EMBL:AY906671
            EMBL:AY906672 EMBL:AY906673 EMBL:AY906674 EMBL:AY906675
            EMBL:AY906676 EMBL:AY906677 EMBL:AY906678 EMBL:AY906679
            EMBL:AY906680 EMBL:AY906681 EMBL:AY906682 EMBL:AY906683
            EMBL:AY906684 EMBL:AY906685 EMBL:AY906686 EMBL:AY906687
            EMBL:AY906688 EMBL:AY906689 EMBL:AY906690 EMBL:AY906691
            EMBL:AY906692 EMBL:AY906693 EMBL:AY906694 EMBL:AY906695
            EMBL:AY906696 EMBL:AY906697 EMBL:AY906698 EMBL:AY906699
            EMBL:AY906700 EMBL:AY906701 EMBL:AY906702 EMBL:AY906703
            EMBL:AY906704 EMBL:AY906705 EMBL:AY906706 EMBL:AY906707
            EMBL:AY906708 EMBL:AY906709 EMBL:AY906711 EMBL:AY906712
            EMBL:AY906713 EMBL:AY906714 EMBL:AY906715 EMBL:AY906716
            EMBL:AY906717 EMBL:AY906718 EMBL:AY906719 EMBL:AY906720
            EMBL:AY906721 EMBL:AY906722 EMBL:AY906723 EMBL:AY906724
            EMBL:AY906725 EMBL:AY906726 EMBL:AY906727 EMBL:AY906728
            EMBL:AY906729 EMBL:AY906730 EMBL:AY906731 EMBL:AY906732
            EMBL:AY906733 EMBL:AY906734 EMBL:AY906735 EMBL:AY906736
            EMBL:AY906737 EMBL:AY906738 EMBL:AY906739 EMBL:AY906740
            EMBL:AY906741 EMBL:AY906742 EMBL:AY906743 EMBL:AY906745
            EMBL:AY906746 EMBL:AY906747 EMBL:AY906748 EMBL:AY906749
            EMBL:AY906750 EMBL:AY906751 EMBL:AY906752 EMBL:AY906753
            EMBL:AY906754 EMBL:AY906755 EMBL:AY906756 EMBL:AY906757
            EMBL:AY906758 EMBL:AY906759 EMBL:AY906760 EMBL:AY906761
            EMBL:AY906762 EMBL:AY906763 EMBL:AY906764 EMBL:AY906765
            EMBL:AY906766 EMBL:AY906767 EMBL:AY906768 EMBL:AY906769
            EMBL:AY906770 EMBL:AY906771 EMBL:AY906772 EMBL:AY906773
            EMBL:AY906774 EMBL:AY906775 PIR:S03629 RefSeq:NP_524511.1
            UniGene:Dm.2352 ProteinModelPortal:P13096 SMR:P13096 DIP:DIP-627N
            IntAct:P13096 MINT:MINT-188710 STRING:P13096 PRIDE:P13096
            EnsemblMetazoa:FBtr0084979 GeneID:43158 KEGG:dme:Dmel_CG6096
            CTD:43158 FlyBase:FBgn0002631 eggNOG:NOG289048 InParanoid:Q56KH0
            OMA:MNAVSEI OrthoDB:EOG459ZXQ PhylomeDB:P13096 ChiTaRS:HLHm5
            GenomeRNAi:43158 NextBio:832467 Bgee:P13096 GermOnline:CG6096
            Uniprot:P13096
        Length = 178

 Score = 147 (56.8 bits), Expect = 2.0e-10, P = 2.0e-10
 Identities = 33/92 (35%), Positives = 58/92 (63%)

Query:    10 YPEVMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRR 69
             Y +V KP+LER+RRAR+N+CLD LK + V   Q + + + +++KA++LE  +  + K   
Sbjct:    18 YLKVKKPLLERQRRARMNKCLDTLKTL-VAEFQGD-DAILRMDKAEMLEAALVFMRKQVV 75

Query:    70 QQSLGLTPEAAYADRFKAGFTHCAAEVSQYLA 101
             +Q   ++P     D FK G+ +  +E+S+ +A
Sbjct:    76 KQQAPVSPLPM--DSFKNGYMNAVSEISRVMA 105


>UNIPROTKB|E1C6T9 [details] [associations]
            symbol:LOC100858839 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0046983 "protein dimerization activity"
            evidence=IEA] [GO:2000820 "negative regulation of transcription
            from RNA polymerase II promoter involved in smooth muscle cell
            differentiation" evidence=IEA] [GO:2001212 "regulation of
            vasculogenesis" evidence=IEA] [GO:0000983 "RNA polymerase II core
            promoter sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0000988 "protein binding transcription
            factor activity" evidence=IEA] [GO:0001102 "RNA polymerase II
            activating transcription factor binding" evidence=IEA] [GO:0001570
            "vasculogenesis" evidence=IEA] [GO:0003150 "muscular septum
            morphogenesis" evidence=IEA] [GO:0003151 "outflow tract
            morphogenesis" evidence=IEA] [GO:0003171 "atrioventricular valve
            development" evidence=IEA] [GO:0003184 "pulmonary valve
            morphogenesis" evidence=IEA] [GO:0003195 "tricuspid valve
            formation" evidence=IEA] [GO:0003199 "endocardial cushion to
            mesenchymal transition involved in heart valve formation"
            evidence=IEA] [GO:0003214 "cardiac left ventricle morphogenesis"
            evidence=IEA] [GO:0003215 "cardiac right ventricle morphogenesis"
            evidence=IEA] [GO:0003222 "ventricular trabecula myocardium
            morphogenesis" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0007219 "Notch signaling pathway" evidence=IEA] [GO:0009948
            "anterior/posterior axis specification" evidence=IEA] [GO:0010460
            "positive regulation of heart rate" evidence=IEA] [GO:0010667
            "negative regulation of cardiac muscle cell apoptotic process"
            evidence=IEA] [GO:0014898 "cardiac muscle hypertrophy in response
            to stress" evidence=IEA] [GO:0016580 "Sin3 complex" evidence=IEA]
            [GO:0017053 "transcriptional repressor complex" evidence=IEA]
            [GO:0035910 "ascending aorta morphogenesis" evidence=IEA]
            [GO:0035912 "dorsal aorta morphogenesis" evidence=IEA] [GO:0035939
            "microsatellite binding" evidence=IEA] [GO:0036304 "umbilical cord
            morphogenesis" evidence=IEA] [GO:0042826 "histone deacetylase
            binding" evidence=IEA] [GO:0045165 "cell fate commitment"
            evidence=IEA] [GO:0045607 "regulation of auditory receptor cell
            differentiation" evidence=IEA] [GO:0045746 "negative regulation of
            Notch signaling pathway" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0055015 "ventricular cardiac muscle cell
            development" evidence=IEA] [GO:0060045 "positive regulation of
            cardiac muscle cell proliferation" evidence=IEA] [GO:0060347 "heart
            trabecula formation" evidence=IEA] [GO:0060413 "atrial septum
            morphogenesis" evidence=IEA] [GO:0060633 "negative regulation of
            transcription initiation from RNA polymerase II promoter"
            evidence=IEA] [GO:0060716 "labyrinthine layer blood vessel
            development" evidence=IEA] [GO:0060842 "arterial endothelial cell
            differentiation" evidence=IEA] [GO:0060948 "cardiac vascular smooth
            muscle cell development" evidence=IEA] [GO:0060977 "coronary
            vasculature morphogenesis" evidence=IEA] [GO:0061156 "pulmonary
            artery morphogenesis" evidence=IEA] [GO:0065004 "protein-DNA
            complex assembly" evidence=IEA] [GO:0090102 "cochlea development"
            evidence=IEA] [GO:2000678 "negative regulation of transcription
            regulatory region DNA binding" evidence=IEA] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 GO:GO:0005737 GO:GO:0017053
            GO:GO:0043565 GO:GO:0007219 GO:GO:0000122 GO:GO:0010460
            Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0000983 GO:GO:0045165
            InterPro:IPR018352 SMART:SM00511 GO:GO:0060045 GO:GO:0045746
            GO:GO:0060633 GO:GO:0016580 GeneTree:ENSGT00700000104130
            GO:GO:0065004 GO:GO:0010667 OMA:TCASQRE EMBL:AADN02001790
            IPI:IPI00582267 Ensembl:ENSGALT00000023951 NextBio:20824448
            Uniprot:E1C6T9
        Length = 335

 Score = 152 (58.6 bits), Expect = 2.2e-10, P = 2.2e-10
 Identities = 35/101 (34%), Positives = 59/101 (58%)

Query:     3 TLSIEVVYPEVMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVR 62
             T + +++  +  + ++E++RR RIN  L EL+ ++ T+ + +G   +KLEKA+IL++TV 
Sbjct:    41 TTTSQIMARKKRRGIIEKRRRDRINNSLSELRRLVPTAFEKQGS--AKLEKAEILQMTVD 98

Query:    63 HLHKLRRQQSLGLTPEAAYA-DRFKAGFTHCAAEVSQYLAS 102
             HL  L+     G     + A D    GF  C  EV++YL S
Sbjct:    99 HLKMLQATGGKGYFDAHSLAMDFMSIGFRECLTEVARYLTS 139


>UNIPROTKB|E1B6Z2 [details] [associations]
            symbol:E1B6Z2 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0060164 "regulation of timing of neuron
            differentiation" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0030901 "midbrain development" evidence=IEA] [GO:0021575
            "hindbrain morphogenesis" evidence=IEA] [GO:0021558 "trochlear
            nerve development" evidence=IEA] [GO:0021557 "oculomotor nerve
            development" evidence=IEA] [GO:0021555 "midbrain-hindbrain boundary
            morphogenesis" evidence=IEA] [GO:0001701 "in utero embryonic
            development" evidence=IEA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0046983 "protein dimerization activity" evidence=IEA]
            InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
            GO:GO:0001701 GO:GO:0045944 GO:GO:0000122 GO:GO:0030901
            Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0021575
            GeneTree:ENSGT00700000104130 GO:GO:0021555 GO:GO:0021557
            GO:GO:0060164 GO:GO:0021558 OMA:QGLWPVP EMBL:DAAA02043087
            IPI:IPI00730168 Ensembl:ENSBTAT00000034110 Uniprot:E1B6Z2
        Length = 203

 Score = 146 (56.5 bits), Expect = 2.5e-10, P = 2.5e-10
 Identities = 36/91 (39%), Positives = 55/91 (60%)

Query:    10 YPEVMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRR 69
             + +V KP++E+KRRARIN  L++LK ++      +     KLEKADILEL+V+++  L+ 
Sbjct:    18 FRKVSKPLMEKKRRARINVSLEQLKSLLEKHYSHQIRK-RKLEKADILELSVKYMKSLQN 76

Query:    70 QQSLGLTPEAAYADRFKAGFTHCAAEVSQYL 100
                 GL P  +  + + +GF  C   VSQ L
Sbjct:    77 SVQ-GLWPVPSGVE-YPSGFRGCLPGVSQLL 105


>MGI|MGI:1860511 [details] [associations]
            symbol:Heyl "hairy/enhancer-of-split related with YRPW
            motif-like" species:10090 "Mus musculus" [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=IDA] [GO:0000979 "RNA polymerase II core promoter
            sequence-specific DNA binding" evidence=IDA] [GO:0000983 "RNA
            polymerase II core promoter sequence-specific DNA binding
            transcription factor activity" evidence=IDA] [GO:0000988 "protein
            binding transcription factor activity" evidence=ISO] [GO:0001077
            "RNA polymerase II core promoter proximal region sequence-specific
            DNA binding transcription factor activity involved in positive
            regulation of transcription" evidence=IDA] [GO:0001106 "RNA
            polymerase II transcription corepressor activity" evidence=IDA]
            [GO:0003151 "outflow tract morphogenesis" evidence=IGI] [GO:0003181
            "atrioventricular valve morphogenesis" evidence=IGI] [GO:0003184
            "pulmonary valve morphogenesis" evidence=IGI] [GO:0003198
            "epithelial to mesenchymal transition involved in endocardial
            cushion formation" evidence=IGI] [GO:0003203 "endocardial cushion
            morphogenesis" evidence=IGI] [GO:0003208 "cardiac ventricle
            morphogenesis" evidence=IMP] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISO;ISS] [GO:0003714
            "transcription corepressor activity" evidence=ISO] [GO:0005515
            "protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO]
            [GO:0005667 "transcription factor complex" evidence=ISS]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
            of transcription from RNA polymerase II promoter" evidence=ISS;IDA]
            [GO:0007219 "Notch signaling pathway" evidence=ISO;TAS] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0007422
            "peripheral nervous system development" evidence=NAS] [GO:0010629
            "negative regulation of gene expression" evidence=IMP] [GO:0014031
            "mesenchymal cell development" evidence=IGI] [GO:0035914 "skeletal
            muscle cell differentiation" evidence=IMP] [GO:0035939
            "microsatellite binding" evidence=ISO] [GO:0042803 "protein
            homodimerization activity" evidence=IDA] [GO:0043565
            "sequence-specific DNA binding" evidence=IDA] [GO:0045666 "positive
            regulation of neuron differentiation" evidence=IMP;IDA] [GO:0045892
            "negative regulation of transcription, DNA-dependent"
            evidence=ISO;IMP] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=ISO;IGI;IDA] [GO:0046982
            "protein heterodimerization activity" evidence=ISO] [GO:0046983
            "protein dimerization activity" evidence=IEA] [GO:0050683 "AF-1
            domain binding" evidence=ISO] [GO:0060317 "cardiac epithelial to
            mesenchymal transition" evidence=IGI] [GO:0060412 "ventricular
            septum morphogenesis" evidence=IGI] [GO:0060766 "negative
            regulation of androgen receptor signaling pathway" evidence=ISO]
            [GO:2000824 "negative regulation of androgen receptor activity"
            evidence=ISO] InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010
            Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353
            MGI:MGI:1860511 GO:GO:0005737 GO:GO:0042803 EMBL:AL606934
            GO:GO:0007219 GO:GO:0007422 Reactome:REACT_115202 GO:GO:0005667
            GO:GO:0001077 GO:GO:0071773 GO:GO:0045666 Gene3D:4.10.280.10
            SUPFAM:SSF47459 GO:GO:0032835 GO:GO:0035914 GO:GO:0000979
            GO:GO:0001106 GO:GO:0003151 GO:GO:0000983 GO:GO:0072014
            InterPro:IPR018352 SMART:SM00511 GO:GO:0003181 GO:GO:0060412
            GO:GO:0060766 GeneTree:ENSGT00700000104130 GO:GO:0003198
            GO:GO:2000824 HOGENOM:HOG000286035 HOVERGEN:HBG003275 KO:K09091
            GO:GO:0035939 GO:GO:0003208 GO:GO:0003184 CTD:26508
            eggNOG:NOG310123 OMA:HSWVSEI OrthoDB:EOG4P8FJZ EMBL:AF172288
            EMBL:AJ271868 EMBL:AB093590 EMBL:AK004697 EMBL:AK028596
            EMBL:AK080822 EMBL:BC130263 IPI:IPI00471352 RefSeq:NP_038933.2
            UniGene:Mm.103615 ProteinModelPortal:Q9DBX7 SMR:Q9DBX7
            IntAct:Q9DBX7 STRING:Q9DBX7 PhosphoSite:Q9DBX7 PRIDE:Q9DBX7
            Ensembl:ENSMUST00000040821 GeneID:56198 KEGG:mmu:56198
            UCSC:uc008uoz.1 InParanoid:Q9DBX7 NextBio:312018 Bgee:Q9DBX7
            Genevestigator:Q9DBX7 Uniprot:Q9DBX7
        Length = 326

 Score = 151 (58.2 bits), Expect = 2.7e-10, P = 2.7e-10
 Identities = 34/85 (40%), Positives = 51/85 (60%)

Query:    17 MLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRRQQSLGLT 76
             ++E++RR RIN  L EL+ ++ T+ + +G   SKLEKA++L++TV HL  L      G  
Sbjct:    50 IIEKRRRDRINSSLSELRRLVPTAFEKQGS--SKLEKAEVLQMTVDHLKMLHASGGTGFF 107

Query:    77 PEAAYADRFKA-GFTHCAAEVSQYL 100
                A A  F++ GF  C  EV +YL
Sbjct:   108 DARALAVDFRSIGFRECLTEVIRYL 132


>RGD|1305022 [details] [associations]
            symbol:Heyl "hairy/enhancer-of-split related with YRPW
            motif-like" species:10116 "Rattus norvegicus" [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=ISO] [GO:0000979 "RNA polymerase II core promoter
            sequence-specific DNA binding" evidence=ISO] [GO:0000983 "RNA
            polymerase II core promoter sequence-specific DNA binding
            transcription factor activity" evidence=ISO] [GO:0000988 "protein
            binding transcription factor activity" evidence=ISO] [GO:0001077
            "RNA polymerase II core promoter proximal region sequence-specific
            DNA binding transcription factor activity involved in positive
            regulation of transcription" evidence=ISO] [GO:0001106 "RNA
            polymerase II transcription corepressor activity" evidence=ISO]
            [GO:0003151 "outflow tract morphogenesis" evidence=ISO] [GO:0003181
            "atrioventricular valve morphogenesis" evidence=ISO] [GO:0003184
            "pulmonary valve morphogenesis" evidence=ISO] [GO:0003198
            "epithelial to mesenchymal transition involved in endocardial
            cushion formation" evidence=ISO] [GO:0003203 "endocardial cushion
            morphogenesis" evidence=ISO] [GO:0003208 "cardiac ventricle
            morphogenesis" evidence=ISO] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISO] [GO:0003714
            "transcription corepressor activity" evidence=ISO] [GO:0005634
            "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0006357 "regulation of transcription from RNA
            polymerase II promoter" evidence=ISO] [GO:0007219 "Notch signaling
            pathway" evidence=ISO] [GO:0010629 "negative regulation of gene
            expression" evidence=ISO] [GO:0014031 "mesenchymal cell
            development" evidence=ISO] [GO:0035914 "skeletal muscle cell
            differentiation" evidence=ISO] [GO:0035939 "microsatellite binding"
            evidence=ISO] [GO:0042803 "protein homodimerization activity"
            evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
            evidence=ISO] [GO:0045666 "positive regulation of neuron
            differentiation" evidence=ISO] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=ISO] [GO:0046982 "protein heterodimerization activity"
            evidence=ISO] [GO:0046983 "protein dimerization activity"
            evidence=IEA] [GO:0050683 "AF-1 domain binding" evidence=ISO]
            [GO:0060317 "cardiac epithelial to mesenchymal transition"
            evidence=ISO] [GO:0060412 "ventricular septum morphogenesis"
            evidence=ISO] [GO:0060766 "negative regulation of androgen receptor
            signaling pathway" evidence=ISO] [GO:2000824 "negative regulation
            of androgen receptor activity" evidence=ISO] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 RGD:1305022 GO:GO:0005634
            GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 Gene3D:4.10.280.10
            SUPFAM:SSF47459 InterPro:IPR018352 SMART:SM00511 EMBL:CH473968
            GeneTree:ENSGT00700000104130 KO:K09091 CTD:26508 OMA:HSWVSEI
            OrthoDB:EOG4P8FJZ EMBL:AC114512 IPI:IPI00209608
            RefSeq:NP_001101447.1 UniGene:Rn.22252 Ensembl:ENSRNOT00000020929
            GeneID:313575 KEGG:rno:313575 UCSC:RGD:1305022 NextBio:666458
            Uniprot:D3ZIH3
        Length = 326

 Score = 151 (58.2 bits), Expect = 2.7e-10, P = 2.7e-10
 Identities = 34/85 (40%), Positives = 51/85 (60%)

Query:    17 MLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRRQQSLGLT 76
             ++E++RR RIN  L EL+ ++ T+ + +G   SKLEKA++L++TV HL  L      G  
Sbjct:    50 IIEKRRRDRINSSLSELRRLVPTAFEKQGS--SKLEKAEVLQMTVDHLKMLHASGGAGFF 107

Query:    77 PEAAYADRFKA-GFTHCAAEVSQYL 100
                A A  F++ GF  C  EV +YL
Sbjct:   108 DARALAVDFRSIGFRECLTEVVRYL 132


>UNIPROTKB|F5H3V9 [details] [associations]
            symbol:HEYL "Hairy/enhancer-of-split-related with YRPW
            motif-like protein" species:9606 "Homo sapiens" [GO:0005634
            "nucleus" evidence=IEA] [GO:0000979 "RNA polymerase II core
            promoter sequence-specific DNA binding" evidence=IEA] [GO:0000983
            "RNA polymerase II core promoter sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0001077 "RNA
            polymerase II core promoter proximal region sequence-specific DNA
            binding transcription factor activity involved in positive
            regulation of transcription" evidence=IEA] [GO:0001106 "RNA
            polymerase II transcription corepressor activity" evidence=IEA]
            [GO:0003151 "outflow tract morphogenesis" evidence=IEA] [GO:0003181
            "atrioventricular valve morphogenesis" evidence=IEA] [GO:0003184
            "pulmonary valve morphogenesis" evidence=IEA] [GO:0003198
            "epithelial to mesenchymal transition involved in endocardial
            cushion formation" evidence=IEA] [GO:0003208 "cardiac ventricle
            morphogenesis" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0032835 "glomerulus development" evidence=IEA] [GO:0042803
            "protein homodimerization activity" evidence=IEA] [GO:0045666
            "positive regulation of neuron differentiation" evidence=IEA]
            [GO:0060412 "ventricular septum morphogenesis" evidence=IEA]
            [GO:0071773 "cellular response to BMP stimulus" evidence=IEA]
            [GO:0072014 "proximal tubule development" evidence=IEA]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 GO:GO:0005634
            GO:GO:0005737 EMBL:AL035404 GO:GO:0001077 GO:GO:0071773
            GO:GO:0045666 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0032835
            GO:GO:0000979 GO:GO:0001106 GO:GO:0000983 GO:GO:0072014
            InterPro:IPR018352 SMART:SM00511 GO:GO:0003198 HGNC:HGNC:4882
            ChiTaRS:HEYL IPI:IPI01010022 ProteinModelPortal:F5H3V9 SMR:F5H3V9
            Ensembl:ENST00000535435 ArrayExpress:F5H3V9 Bgee:F5H3V9
            Uniprot:F5H3V9
        Length = 300

 Score = 150 (57.9 bits), Expect = 2.7e-10, P = 2.7e-10
 Identities = 34/85 (40%), Positives = 51/85 (60%)

Query:    17 MLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRRQQSLGLT 76
             ++E++RR RIN  L EL+ ++ T+ + +G   SKLEKA++L++TV HL  L      G  
Sbjct:    22 IIEKRRRDRINSSLSELRRLVPTAFEKQGS--SKLEKAEVLQMTVDHLKMLHATGGTGFF 79

Query:    77 PEAAYADRFKA-GFTHCAAEVSQYL 100
                A A  F++ GF  C  EV +YL
Sbjct:    80 DARALAVDFRSIGFRECLTEVIRYL 104


>UNIPROTKB|E2R9J1 [details] [associations]
            symbol:PABPC4 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0046983 "protein dimerization activity" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 GO:GO:0005634 GO:GO:0006355
            GO:GO:0003677 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
            InterPro:IPR018352 SMART:SM00511 KO:K09091 CTD:26508
            GeneTree:ENSGT00640000091232 EMBL:AAEX03009572 RefSeq:XP_849702.1
            Ensembl:ENSCAFT00000004941 GeneID:607804 KEGG:cfa:607804
            NextBio:20893507 Uniprot:E2R9J1
        Length = 326

 Score = 150 (57.9 bits), Expect = 3.4e-10, P = 3.4e-10
 Identities = 34/85 (40%), Positives = 51/85 (60%)

Query:    17 MLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRRQQSLGLT 76
             ++E++RR RIN  L EL+ ++ T+ + +G   SKLEKA++L++TV HL  L      G  
Sbjct:    50 IIEKRRRDRINSSLSELRRLVPTAFEKQGS--SKLEKAEVLQMTVDHLKMLHATGGTGFF 107

Query:    77 PEAAYADRFKA-GFTHCAAEVSQYL 100
                A A  F++ GF  C  EV +YL
Sbjct:   108 DARALAVDFRSIGFRECLTEVIRYL 132


>UNIPROTKB|Q2NL18 [details] [associations]
            symbol:HEYL "Hairy/enhancer-of-split related with YRPW
            motif-like protein" species:9913 "Bos taurus" [GO:0005634 "nucleus"
            evidence=IEA] [GO:2000824 "negative regulation of androgen receptor
            activity" evidence=IEA] [GO:0072014 "proximal tubule development"
            evidence=IEA] [GO:0071773 "cellular response to BMP stimulus"
            evidence=IEA] [GO:0060766 "negative regulation of androgen receptor
            signaling pathway" evidence=IEA] [GO:0060412 "ventricular septum
            morphogenesis" evidence=IEA] [GO:0050683 "AF-1 domain binding"
            evidence=IEA] [GO:0046982 "protein heterodimerization activity"
            evidence=IEA] [GO:0045666 "positive regulation of neuron
            differentiation" evidence=IEA] [GO:0042803 "protein
            homodimerization activity" evidence=IEA] [GO:0035939
            "microsatellite binding" evidence=IEA] [GO:0032835 "glomerulus
            development" evidence=IEA] [GO:0007219 "Notch signaling pathway"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003208
            "cardiac ventricle morphogenesis" evidence=IEA] [GO:0003198
            "epithelial to mesenchymal transition involved in endocardial
            cushion formation" evidence=IEA] [GO:0003184 "pulmonary valve
            morphogenesis" evidence=IEA] [GO:0003181 "atrioventricular valve
            morphogenesis" evidence=IEA] [GO:0003151 "outflow tract
            morphogenesis" evidence=IEA] [GO:0001106 "RNA polymerase II
            transcription corepressor activity" evidence=IEA] [GO:0001077 "RNA
            polymerase II core promoter proximal region sequence-specific DNA
            binding transcription factor activity involved in positive
            regulation of transcription" evidence=IEA] [GO:0000983 "RNA
            polymerase II core promoter sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0000979 "RNA
            polymerase II core promoter sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010
            Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353
            GO:GO:0005634 GO:GO:0005737 GO:GO:0007219 GO:GO:0001077
            GO:GO:0071773 GO:GO:0045666 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GO:GO:0032835 GO:GO:0000979 GO:GO:0001106 GO:GO:0000983
            GO:GO:0072014 InterPro:IPR018352 SMART:SM00511 GO:GO:0060766
            GO:GO:0003198 GO:GO:2000824 HOGENOM:HOG000286035 HOVERGEN:HBG003275
            KO:K09091 GO:GO:0035939 EMBL:BT021889 EMBL:BC111205 IPI:IPI00711062
            IPI:IPI00847112 RefSeq:NP_001019736.2 UniGene:Bt.34222
            ProteinModelPortal:Q2NL18 SMR:Q2NL18 GeneID:538609 KEGG:bta:538609
            CTD:26508 eggNOG:NOG310123 InParanoid:Q2NL18 OMA:HSWVSEI
            OrthoDB:EOG4P8FJZ NextBio:20877472 ArrayExpress:Q2NL18
            Uniprot:Q2NL18
        Length = 328

 Score = 150 (57.9 bits), Expect = 3.5e-10, P = 3.5e-10
 Identities = 34/85 (40%), Positives = 51/85 (60%)

Query:    17 MLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRRQQSLGLT 76
             ++E++RR RIN  L EL+ ++ T+ + +G   SKLEKA++L++TV HL  L      G  
Sbjct:    50 IIEKRRRDRINSSLSELRRLVPTAFEKQGS--SKLEKAEVLQMTVDHLKMLHATGGTGFF 107

Query:    77 PEAAYADRFKA-GFTHCAAEVSQYL 100
                A A  F++ GF  C  EV +YL
Sbjct:   108 DARALAVDFRSIGFRECLTEVIRYL 132


>UNIPROTKB|Q9NQ87 [details] [associations]
            symbol:HEYL "Hairy/enhancer-of-split related with YRPW
            motif-like protein" species:9606 "Homo sapiens" [GO:0000979 "RNA
            polymerase II core promoter sequence-specific DNA binding"
            evidence=IEA] [GO:0001077 "RNA polymerase II core promoter proximal
            region sequence-specific DNA binding transcription factor activity
            involved in positive regulation of transcription" evidence=IEA]
            [GO:0001106 "RNA polymerase II transcription corepressor activity"
            evidence=IEA] [GO:0032835 "glomerulus development" evidence=IEA]
            [GO:0042803 "protein homodimerization activity" evidence=IEA]
            [GO:0071773 "cellular response to BMP stimulus" evidence=IEA]
            [GO:0072014 "proximal tubule development" evidence=IEA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IDA] [GO:0000988 "protein binding transcription
            factor activity" evidence=IDA] [GO:0005737 "cytoplasm"
            evidence=ISS] [GO:0007219 "Notch signaling pathway"
            evidence=IDA;TAS] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=IDA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0003198 "epithelial to mesenchymal transition involved in
            endocardial cushion formation" evidence=ISS] [GO:0005634 "nucleus"
            evidence=IDA] [GO:2000824 "negative regulation of androgen receptor
            activity" evidence=IDA] [GO:0003714 "transcription corepressor
            activity" evidence=IDA] [GO:0050683 "AF-1 domain binding"
            evidence=IPI] [GO:0046982 "protein heterodimerization activity"
            evidence=IDA] [GO:0060766 "negative regulation of androgen receptor
            signaling pathway" evidence=IDA] [GO:0035939 "microsatellite
            binding" evidence=IDA] [GO:0008134 "transcription factor binding"
            evidence=NAS] [GO:0000983 "RNA polymerase II core promoter
            sequence-specific DNA binding transcription factor activity"
            evidence=ISS] [GO:0045666 "positive regulation of neuron
            differentiation" evidence=ISS] [GO:0003151 "outflow tract
            morphogenesis" evidence=ISS] [GO:0003181 "atrioventricular valve
            morphogenesis" evidence=ISS] [GO:0003184 "pulmonary valve
            morphogenesis" evidence=ISS] [GO:0003203 "endocardial cushion
            morphogenesis" evidence=ISS] [GO:0003208 "cardiac ventricle
            morphogenesis" evidence=ISS] [GO:0014031 "mesenchymal cell
            development" evidence=ISS] [GO:0060317 "cardiac epithelial to
            mesenchymal transition" evidence=ISS] [GO:0060412 "ventricular
            septum morphogenesis" evidence=ISS] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 GO:GO:0005634 GO:GO:0005737
            Reactome:REACT_111102 GO:GO:0003714 GO:GO:0045892 EMBL:AL035404
            GO:GO:0045944 GO:GO:0007219 GO:GO:0001077 GO:GO:0071773
            GO:GO:0046982 GO:GO:0045666 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GO:GO:0008134 GO:GO:0032835 GO:GO:0000979 GO:GO:0001106
            GO:GO:0003151 GO:GO:0000983 GO:GO:0072014 InterPro:IPR018352
            SMART:SM00511 GO:GO:0003181 GO:GO:0060412 GO:GO:0060766
            GO:GO:0003198 GO:GO:2000824 HOGENOM:HOG000286035 HOVERGEN:HBG003275
            KO:K09091 GO:GO:0035939 GO:GO:0003208 GO:GO:0003184 CTD:26508
            eggNOG:NOG310123 OMA:HSWVSEI OrthoDB:EOG4P8FJZ EMBL:AJ272215
            EMBL:AF311885 EMBL:BC006087 IPI:IPI00005137 RefSeq:NP_055386.1
            UniGene:Hs.472566 ProteinModelPortal:Q9NQ87 SMR:Q9NQ87
            IntAct:Q9NQ87 MINT:MINT-1190764 STRING:Q9NQ87 PhosphoSite:Q9NQ87
            DMDM:146286205 PRIDE:Q9NQ87 DNASU:26508 Ensembl:ENST00000372852
            GeneID:26508 KEGG:hsa:26508 UCSC:uc001cdp.3 GeneCards:GC01M040119
            HGNC:HGNC:4882 HPA:HPA001438 MIM:609034 neXtProt:NX_Q9NQ87
            PharmGKB:PA29260 InParanoid:Q9NQ87 PhylomeDB:Q9NQ87 ChiTaRS:HEYL
            GenomeRNAi:26508 NextBio:48798 ArrayExpress:Q9NQ87 Bgee:Q9NQ87
            CleanEx:HS_HEYL Genevestigator:Q9NQ87 Uniprot:Q9NQ87
        Length = 328

 Score = 150 (57.9 bits), Expect = 3.5e-10, P = 3.5e-10
 Identities = 34/85 (40%), Positives = 51/85 (60%)

Query:    17 MLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRRQQSLGLT 76
             ++E++RR RIN  L EL+ ++ T+ + +G   SKLEKA++L++TV HL  L      G  
Sbjct:    50 IIEKRRRDRINSSLSELRRLVPTAFEKQGS--SKLEKAEVLQMTVDHLKMLHATGGTGFF 107

Query:    77 PEAAYADRFKA-GFTHCAAEVSQYL 100
                A A  F++ GF  C  EV +YL
Sbjct:   108 DARALAVDFRSIGFRECLTEVIRYL 132


>UNIPROTKB|I3LJW8 [details] [associations]
            symbol:HEYL "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:2000824 "negative regulation of androgen receptor
            activity" evidence=IEA] [GO:0072014 "proximal tubule development"
            evidence=IEA] [GO:0071773 "cellular response to BMP stimulus"
            evidence=IEA] [GO:0060766 "negative regulation of androgen receptor
            signaling pathway" evidence=IEA] [GO:0060412 "ventricular septum
            morphogenesis" evidence=IEA] [GO:0050683 "AF-1 domain binding"
            evidence=IEA] [GO:0046982 "protein heterodimerization activity"
            evidence=IEA] [GO:0045666 "positive regulation of neuron
            differentiation" evidence=IEA] [GO:0042803 "protein
            homodimerization activity" evidence=IEA] [GO:0035939
            "microsatellite binding" evidence=IEA] [GO:0032835 "glomerulus
            development" evidence=IEA] [GO:0007219 "Notch signaling pathway"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003208
            "cardiac ventricle morphogenesis" evidence=IEA] [GO:0003198
            "epithelial to mesenchymal transition involved in endocardial
            cushion formation" evidence=IEA] [GO:0003184 "pulmonary valve
            morphogenesis" evidence=IEA] [GO:0003181 "atrioventricular valve
            morphogenesis" evidence=IEA] [GO:0003151 "outflow tract
            morphogenesis" evidence=IEA] [GO:0001106 "RNA polymerase II
            transcription corepressor activity" evidence=IEA] [GO:0001077 "RNA
            polymerase II core promoter proximal region sequence-specific DNA
            binding transcription factor activity involved in positive
            regulation of transcription" evidence=IEA] [GO:0000983 "RNA
            polymerase II core promoter sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0000979 "RNA
            polymerase II core promoter sequence-specific DNA binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 GO:GO:0005634
            GO:GO:0005737 GO:GO:0007219 GO:GO:0001077 GO:GO:0071773
            GO:GO:0045666 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0032835
            GO:GO:0000979 GO:GO:0001106 GO:GO:0000983 GO:GO:0072014
            InterPro:IPR018352 SMART:SM00511 GO:GO:0060766
            GeneTree:ENSGT00700000104130 GO:GO:0003198 GO:GO:2000824 KO:K09091
            GO:GO:0035939 OMA:HSWVSEI EMBL:CR956427 EMBL:CR956622
            RefSeq:XP_003127874.3 Ensembl:ENSSSCT00000023745 GeneID:100518256
            KEGG:ssc:100518256 Uniprot:I3LJW8
        Length = 328

 Score = 150 (57.9 bits), Expect = 3.5e-10, P = 3.5e-10
 Identities = 34/85 (40%), Positives = 51/85 (60%)

Query:    17 MLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRRQQSLGLT 76
             ++E++RR RIN  L EL+ ++ T+ + +G   SKLEKA++L++TV HL  L      G  
Sbjct:    50 IIEKRRRDRINSSLSELRRLVPTAFEKQGS--SKLEKAEVLQMTVDHLKMLHATGGTGFF 107

Query:    77 PEAAYADRFKA-GFTHCAAEVSQYL 100
                A A  F++ GF  C  EV +YL
Sbjct:   108 DARALAVDFRSIGFRECLTEVIRYL 132


>UNIPROTKB|G3X6Q3 [details] [associations]
            symbol:HEYL "Hairy/enhancer-of-split-related with YRPW
            motif-like protein" species:9913 "Bos taurus" [GO:2000824 "negative
            regulation of androgen receptor activity" evidence=IEA] [GO:0072014
            "proximal tubule development" evidence=IEA] [GO:0071773 "cellular
            response to BMP stimulus" evidence=IEA] [GO:0060766 "negative
            regulation of androgen receptor signaling pathway" evidence=IEA]
            [GO:0060412 "ventricular septum morphogenesis" evidence=IEA]
            [GO:0050683 "AF-1 domain binding" evidence=IEA] [GO:0046982
            "protein heterodimerization activity" evidence=IEA] [GO:0045666
            "positive regulation of neuron differentiation" evidence=IEA]
            [GO:0042803 "protein homodimerization activity" evidence=IEA]
            [GO:0035939 "microsatellite binding" evidence=IEA] [GO:0032835
            "glomerulus development" evidence=IEA] [GO:0007219 "Notch signaling
            pathway" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0003208 "cardiac ventricle morphogenesis" evidence=IEA]
            [GO:0003198 "epithelial to mesenchymal transition involved in
            endocardial cushion formation" evidence=IEA] [GO:0003184 "pulmonary
            valve morphogenesis" evidence=IEA] [GO:0003181 "atrioventricular
            valve morphogenesis" evidence=IEA] [GO:0003151 "outflow tract
            morphogenesis" evidence=IEA] [GO:0001106 "RNA polymerase II
            transcription corepressor activity" evidence=IEA] [GO:0001077 "RNA
            polymerase II core promoter proximal region sequence-specific DNA
            binding transcription factor activity involved in positive
            regulation of transcription" evidence=IEA] [GO:0000983 "RNA
            polymerase II core promoter sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0000979 "RNA
            polymerase II core promoter sequence-specific DNA binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 GO:GO:0005634
            GO:GO:0005737 GO:GO:0007219 GO:GO:0001077 GO:GO:0071773
            GO:GO:0045666 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0032835
            GO:GO:0000979 GO:GO:0001106 GO:GO:0000983 GO:GO:0072014
            InterPro:IPR018352 SMART:SM00511 GO:GO:0060766
            GeneTree:ENSGT00700000104130 GO:GO:0003198 GO:GO:2000824 KO:K09091
            GO:GO:0035939 RefSeq:NP_001019736.2 UniGene:Bt.34222 GeneID:538609
            KEGG:bta:538609 CTD:26508 OMA:HSWVSEI NextBio:20877472
            EMBL:DAAA02009142 Ensembl:ENSBTAT00000011453 Uniprot:G3X6Q3
        Length = 329

 Score = 150 (57.9 bits), Expect = 3.5e-10, P = 3.5e-10
 Identities = 34/85 (40%), Positives = 51/85 (60%)

Query:    17 MLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRRQQSLGLT 76
             ++E++RR RIN  L EL+ ++ T+ + +G   SKLEKA++L++TV HL  L      G  
Sbjct:    51 IIEKRRRDRINSSLSELRRLVPTAFEKQGS--SKLEKAEVLQMTVDHLKMLHATGGTGFF 108

Query:    77 PEAAYADRFKA-GFTHCAAEVSQYL 100
                A A  F++ GF  C  EV +YL
Sbjct:   109 DARALAVDFRSIGFRECLTEVIRYL 133


>UNIPROTKB|A6H787 [details] [associations]
            symbol:HES5 "HES5 protein" species:9913 "Bos taurus"
            [GO:0008284 "positive regulation of cell proliferation"
            evidence=ISS] [GO:0050767 "regulation of neurogenesis"
            evidence=ISS] [GO:0048469 "cell maturation" evidence=ISS]
            [GO:0045665 "negative regulation of neuron differentiation"
            evidence=ISS] [GO:0045595 "regulation of cell differentiation"
            evidence=ISS] [GO:0042491 "auditory receptor cell differentiation"
            evidence=ISS] [GO:0031641 "regulation of myelination" evidence=ISS]
            [GO:0030513 "positive regulation of BMP signaling pathway"
            evidence=ISS] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0043010 "camera-type eye
            development" evidence=ISS] [GO:2000737 "negative regulation of stem
            cell differentiation" evidence=ISS] [GO:0007420 "brain development"
            evidence=ISS] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0007219 "Notch signaling pathway"
            evidence=ISS] [GO:0051216 "cartilage development" evidence=ISS]
            [GO:0048661 "positive regulation of smooth muscle cell
            proliferation" evidence=ISS] [GO:0046427 "positive regulation of
            JAK-STAT cascade" evidence=ISS] [GO:0042517 "positive regulation of
            tyrosine phosphorylation of Stat3 protein" evidence=ISS]
            [GO:0002062 "chondrocyte differentiation" evidence=ISS] [GO:0048708
            "astrocyte differentiation" evidence=ISS] [GO:0006461 "protein
            complex assembly" evidence=ISS] [GO:2000974 "negative regulation of
            pro-B cell differentiation" evidence=ISS] [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=ISS] [GO:0022010 "central nervous system myelination"
            evidence=ISS] [GO:0021915 "neural tube development" evidence=ISS]
            [GO:0021781 "glial cell fate commitment" evidence=ISS] [GO:0021537
            "telencephalon development" evidence=ISS] [GO:0014003
            "oligodendrocyte development" evidence=ISS] [GO:0007224 "smoothened
            signaling pathway" evidence=ISS] [GO:0007155 "cell adhesion"
            evidence=ISS] [GO:0001078 "RNA polymerase II core promoter proximal
            region sequence-specific DNA binding transcription factor activity
            involved in negative regulation of transcription" evidence=ISS]
            [GO:0048715 "negative regulation of oligodendrocyte
            differentiation" evidence=ISS] [GO:0048712 "negative regulation of
            astrocyte differentiation" evidence=ISS] [GO:2000981 "negative
            regulation of inner ear receptor cell differentiation"
            evidence=IEA] [GO:0097150 "neuronal stem cell maintenance"
            evidence=IEA] [GO:0072282 "metanephric nephron tubule
            morphogenesis" evidence=IEA] [GO:0072086 "specification of loop of
            Henle identity" evidence=IEA] [GO:0072050 "S-shaped body
            morphogenesis" evidence=IEA] [GO:0072049 "comma-shaped body
            morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0045747 "positive regulation of Notch signaling pathway"
            evidence=IEA] [GO:0042668 "auditory receptor cell fate
            determination" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0046983 "protein dimerization activity" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 GO:GO:0005634 GO:GO:0045893
            GO:GO:0006461 GO:GO:0003677 GO:GO:0001078 GO:GO:0048661
            GO:GO:0045944 GO:GO:0045665 GO:GO:0007155 GO:GO:0007219
            GO:GO:0045747 GO:GO:0043010 GO:GO:0030513 GO:GO:0051216
            GO:GO:0022010 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0021915
            GO:GO:0007224 GO:GO:0042517 GO:GO:0048712 GO:GO:0042668
            GO:GO:0048469 InterPro:IPR018352 SMART:SM00511 GO:GO:0021537
            GO:GO:0048715 GO:GO:0031641 GO:GO:0042491 GO:GO:0097150
            GeneTree:ENSGT00700000104168 GO:GO:0048708 HOGENOM:HOG000236346
            HOVERGEN:HBG005960 GO:GO:2000974 GO:GO:0072049 GO:GO:0072282
            GO:GO:2000737 GO:GO:0072050 CTD:388585 eggNOG:NOG83691 KO:K06055
            OMA:QFLTLHS GO:GO:0021781 GO:GO:2000981 GO:GO:0072086
            EMBL:DAAA02043208 EMBL:BC146153 IPI:IPI00699910
            RefSeq:NP_001098937.1 UniGene:Bt.37917 STRING:A6H787
            Ensembl:ENSBTAT00000003221 GeneID:787633 KEGG:bta:787633
            InParanoid:A6H787 NextBio:20928586 Uniprot:A6H787
        Length = 165

 Score = 144 (55.7 bits), Expect = 4.1e-10, P = 4.1e-10
 Identities = 42/135 (31%), Positives = 72/135 (53%)

Query:     2 STLSIEVVYPE----VMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADIL 57
             ST+++E++ P+    + KP++E+ RR RIN  +++LK ++         N SKLEKADIL
Sbjct:     4 STVAVELLSPKEKNRLRKPVVEKMRRDRINSSIEQLKLLLEQEFARHQPN-SKLEKADIL 62

Query:    58 ELTVRHLHKLRRQQSLGLTPEAAYADRFKAGFTHCAAEVSQYL----ASSMQQ----HQQ 109
             E+ V +L   +   +    P++ + D +  G++ C  E  Q+L    AS  Q     H Q
Sbjct:    63 EMAVSYLKHSKAFAAAAAGPKSLHQD-YSEGYSWCLQEAVQFLTLHAASDTQMKLLYHFQ 121

Query:   110 QP---STEPTIDPSS 121
             +P   +  P  +P +
Sbjct:   122 RPPAATAAPAKEPKA 136


>UNIPROTKB|Q9I8A3 [details] [associations]
            symbol:hey1 "Hairy/enhancer-of-split related with YRPW
            motif protein 1" species:8355 "Xenopus laevis" [GO:0000122
            "negative regulation of transcription from RNA polymerase II
            promoter" evidence=IMP;IDA] [GO:0003677 "DNA binding" evidence=IDA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0007219 "Notch signaling
            pathway" evidence=IMP] [GO:0033504 "floor plate development"
            evidence=IMP] [GO:0042803 "protein homodimerization activity"
            evidence=IPI] [GO:0043425 "bHLH transcription factor binding"
            evidence=IPI] [GO:0043565 "sequence-specific DNA binding"
            evidence=IDA] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=IMP;IDA] [GO:0046982 "protein
            heterodimerization activity" evidence=IPI] [GO:0048793 "pronephros
            development" evidence=IMP] [GO:0072013 "glomus development"
            evidence=IMP] [GO:0072082 "specification of proximal tubule
            identity" evidence=IMP] [GO:0072196 "proximal/distal pattern
            formation involved in pronephric nephron development" evidence=IMP]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 GO:GO:0005634
            GO:GO:0043565 GO:GO:0007219 GO:GO:0006351 GO:GO:0000122
            Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR018352 SMART:SM00511
            GO:GO:0033504 GO:GO:0072196 CTD:23462 HOVERGEN:HBG003275 KO:K09091
            EMBL:AJ401271 EMBL:BC084410 RefSeq:NP_001083926.1 UniGene:Xl.469
            ProteinModelPortal:Q9I8A3 SMR:Q9I8A3 GeneID:399195 KEGG:xla:399195
            Xenbase:XB-GENE-865637 GO:GO:0072013 GO:GO:0072082 Uniprot:Q9I8A3
        Length = 294

 Score = 148 (57.2 bits), Expect = 4.3e-10, P = 4.3e-10
 Identities = 34/98 (34%), Positives = 60/98 (61%)

Query:     5 SIEVVYPEVMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHL 64
             S +++  +  + ++E++RR RIN  L EL+ ++ ++ + +G   +KLEKA+IL++TV HL
Sbjct:    39 SSQILARKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQGS--AKLEKAEILQMTVDHL 96

Query:    65 HKLRRQQSLGLTPEAAYADRFKA-GFTHCAAEVSQYLA 101
               L      G     A A  +++ GF  C AEV++YL+
Sbjct:    97 KMLHTAGGKGYFDAHALAMDYRSLGFRECLAEVARYLS 134


>UNIPROTKB|F1NDT2 [details] [associations]
            symbol:HEY1 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0046983 "protein dimerization activity" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0000988 "protein binding transcription factor activity"
            evidence=IEA] [GO:0001525 "angiogenesis" evidence=IEA] [GO:0001570
            "vasculogenesis" evidence=IEA] [GO:0002076 "osteoblast development"
            evidence=IEA] [GO:0003198 "epithelial to mesenchymal transition
            involved in endocardial cushion formation" evidence=IEA]
            [GO:0003199 "endocardial cushion to mesenchymal transition involved
            in heart valve formation" evidence=IEA] [GO:0003222 "ventricular
            trabecula myocardium morphogenesis" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007219
            "Notch signaling pathway" evidence=IEA] [GO:0009948
            "anterior/posterior axis specification" evidence=IEA] [GO:0035939
            "microsatellite binding" evidence=IEA] [GO:0045669 "positive
            regulation of osteoblast differentiation" evidence=IEA] [GO:0045746
            "negative regulation of Notch signaling pathway" evidence=IEA]
            [GO:0060840 "artery development" evidence=IEA] [GO:2000678
            "negative regulation of transcription regulatory region DNA
            binding" evidence=IEA] [GO:2000820 "negative regulation of
            transcription from RNA polymerase II promoter involved in smooth
            muscle cell differentiation" evidence=IEA] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 GO:GO:0005634 GO:GO:0007219
            GO:GO:0003700 GO:GO:0006351 GO:GO:0000122 GO:GO:0045669
            Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR018352 SMART:SM00511
            GO:GO:0045746 GO:GO:0000988 GeneTree:ENSGT00700000104130
            GO:GO:2000678 OMA:AHPDYSS GO:GO:0035939 EMBL:AADN02024740
            IPI:IPI00581431 Ensembl:ENSGALT00000025381 Uniprot:F1NDT2
        Length = 274

 Score = 147 (56.8 bits), Expect = 4.3e-10, P = 4.3e-10
 Identities = 33/86 (38%), Positives = 54/86 (62%)

Query:    17 MLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRRQQSLGLT 76
             ++E++RR RIN  L EL+ ++ ++ + +G   +KLEKA+IL++TV HL  L      G  
Sbjct:    26 IIEKRRRDRINNSLSELRRLVPSAFEKQGS--AKLEKAEILQMTVDHLKMLHTAGGKGYF 83

Query:    77 PEAAYADRFKA-GFTHCAAEVSQYLA 101
                A A  +++ GF  C AEV++YL+
Sbjct:    84 DAHALAMDYRSLGFRECLAEVARYLS 109


>UNIPROTKB|Q66KK8 [details] [associations]
            symbol:hey1 "Hairy/enhancer-of-split related with YRPW
            motif protein 1" species:8364 "Xenopus (Silurana) tropicalis"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=ISS] [GO:0005634 "nucleus"
            evidence=ISS] [GO:0007219 "Notch signaling pathway" evidence=ISS]
            [GO:0033504 "floor plate development" evidence=ISS] [GO:0042803
            "protein homodimerization activity" evidence=ISS] [GO:0043565
            "sequence-specific DNA binding" evidence=ISS] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=ISS]
            [GO:0046982 "protein heterodimerization activity" evidence=ISS]
            [GO:0048793 "pronephros development" evidence=ISS] [GO:0072013
            "glomus development" evidence=ISS] [GO:0072082 "specification of
            proximal tubule identity" evidence=ISS] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 GO:GO:0005634 GO:GO:0042803
            GO:GO:0043565 GO:GO:0007219 GO:GO:0006351 GO:GO:0000122
            GO:GO:0046982 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR018352
            SMART:SM00511 GO:GO:0033504 CTD:23462 eggNOG:NOG241271
            HOGENOM:HOG000286035 HOVERGEN:HBG003275 KO:K09091 OrthoDB:EOG4GB77H
            GO:GO:0072013 GO:GO:0072082 EMBL:CR760684 EMBL:BC080349
            RefSeq:NP_001007911.1 UniGene:Str.11458 ProteinModelPortal:Q66KK8
            SMR:Q66KK8 STRING:Q66KK8 GeneID:493293 KEGG:xtr:493293
            Xenbase:XB-GENE-486694 InParanoid:Q66KK8 Bgee:Q66KK8 Uniprot:Q66KK8
        Length = 300

 Score = 148 (57.2 bits), Expect = 4.5e-10, P = 4.5e-10
 Identities = 34/98 (34%), Positives = 60/98 (61%)

Query:     5 SIEVVYPEVMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHL 64
             S +++  +  + ++E++RR RIN  L EL+ ++ ++ + +G   +KLEKA+IL++TV HL
Sbjct:    43 SSQILARKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQGS--AKLEKAEILQMTVDHL 100

Query:    65 HKLRRQQSLGLTPEAAYADRFKA-GFTHCAAEVSQYLA 101
               L      G     A A  +++ GF  C AEV++YL+
Sbjct:   101 KMLHTAGGKGYFDAHALAMDYRSLGFRECLAEVARYLS 138


>UNIPROTKB|D6REB3 [details] [associations]
            symbol:HES4 "Transcription factor HES-4" species:9606 "Homo
            sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            InterPro:IPR003650 Pfam:PF07527 PROSITE:PS51054 GO:GO:0006355
            GO:GO:0003677 EMBL:AL645608 InterPro:IPR018352 SMART:SM00511
            HOGENOM:HOG000236346 HGNC:HGNC:24149 IPI:IPI00966381
            ProteinModelPortal:D6REB3 SMR:D6REB3 Ensembl:ENST00000484667
            ArrayExpress:D6REB3 Bgee:D6REB3 Uniprot:D6REB3
        Length = 189

 Score = 143 (55.4 bits), Expect = 5.2e-10, P = 5.2e-10
 Identities = 30/54 (55%), Positives = 40/54 (74%)

Query:    49 SKLEKADILELTVRHLHKLRRQQ-SLGLTPEAAYADRFKAGFTHCAAEVSQYLA 101
             SKLEKADILE+TVRHL  LRR Q +  L+ + A   +++AGF  C AEV+++LA
Sbjct:    41 SKLEKADILEMTVRHLRSLRRVQVTAALSADPAVLGKYRAGFHECLAEVNRFLA 94


>UNIPROTKB|Q5TA89 [details] [associations]
            symbol:HES5 "Transcription factor HES-5" species:9606 "Homo
            sapiens" [GO:0046983 "protein dimerization activity" evidence=IEA]
            [GO:0003682 "chromatin binding" evidence=IEA] [GO:0003690
            "double-stranded DNA binding" evidence=IEA] [GO:0021861 "forebrain
            radial glial cell differentiation" evidence=IEA] [GO:0042668
            "auditory receptor cell fate determination" evidence=IEA]
            [GO:0045747 "positive regulation of Notch signaling pathway"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0072049
            "comma-shaped body morphogenesis" evidence=IEA] [GO:0072050
            "S-shaped body morphogenesis" evidence=IEA] [GO:0072086
            "specification of loop of Henle identity" evidence=IEA] [GO:0072282
            "metanephric nephron tubule morphogenesis" evidence=IEA]
            [GO:2000978 "negative regulation of forebrain neuron
            differentiation" evidence=IEA] [GO:2000981 "negative regulation of
            inner ear receptor cell differentiation" evidence=IEA] [GO:0048661
            "positive regulation of smooth muscle cell proliferation"
            evidence=IGI] [GO:0007219 "Notch signaling pathway"
            evidence=IMP;TAS] [GO:0048712 "negative regulation of astrocyte
            differentiation" evidence=ISS] [GO:0048715 "negative regulation of
            oligodendrocyte differentiation" evidence=ISS] [GO:0001078 "RNA
            polymerase II core promoter proximal region sequence-specific DNA
            binding transcription factor activity involved in negative
            regulation of transcription" evidence=ISS] [GO:0007155 "cell
            adhesion" evidence=ISS] [GO:0007224 "smoothened signaling pathway"
            evidence=ISS] [GO:0014003 "oligodendrocyte development"
            evidence=ISS] [GO:0021537 "telencephalon development" evidence=ISS]
            [GO:0021781 "glial cell fate commitment" evidence=ISS] [GO:0021915
            "neural tube development" evidence=ISS] [GO:0022010 "central
            nervous system myelination" evidence=ISS] [GO:0030513 "positive
            regulation of BMP signaling pathway" evidence=ISS] [GO:0031641
            "regulation of myelination" evidence=ISS] [GO:0042491 "auditory
            receptor cell differentiation" evidence=ISS] [GO:0045595
            "regulation of cell differentiation" evidence=ISS] [GO:0045665
            "negative regulation of neuron differentiation" evidence=ISS]
            [GO:0048469 "cell maturation" evidence=ISS] [GO:0050767 "regulation
            of neurogenesis" evidence=ISS] [GO:2000974 "negative regulation of
            pro-B cell differentiation" evidence=ISS] [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=ISS] [GO:0006461 "protein complex assembly" evidence=ISS]
            [GO:0048708 "astrocyte differentiation" evidence=ISS] [GO:0002062
            "chondrocyte differentiation" evidence=ISS] [GO:0042517 "positive
            regulation of tyrosine phosphorylation of Stat3 protein"
            evidence=ISS] [GO:0046427 "positive regulation of JAK-STAT cascade"
            evidence=ISS] [GO:0051216 "cartilage development" evidence=IDA]
            [GO:0008284 "positive regulation of cell proliferation"
            evidence=IMP] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0007420 "brain development"
            evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0097150 "neuronal stem cell maintenance" evidence=IEP]
            [GO:2000737 "negative regulation of stem cell differentiation"
            evidence=IMP] [GO:0043010 "camera-type eye development"
            evidence=ISS] [GO:0008134 "transcription factor binding"
            evidence=NAS] [GO:0005654 "nucleoplasm" evidence=TAS]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 Reactome:REACT_111102
            GO:GO:0045893 GO:GO:0005654 GO:GO:0006461 GO:GO:0001078
            GO:GO:0048661 GO:GO:0045944 GO:GO:0045665 GO:GO:0007155
            GO:GO:0007219 GO:GO:0045747 GO:GO:0003682 GO:GO:0043010
            EMBL:CH471183 GO:GO:0003690 GO:GO:0030513 GO:GO:0051216
            GO:GO:0022010 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0008134
            GO:GO:0021915 GO:GO:0007224 GO:GO:0042517 GO:GO:0048712
            GO:GO:0042668 GO:GO:0048469 GO:GO:0021537 GO:GO:0048715
            GO:GO:0031641 GO:GO:0042491 GO:GO:0097150 GO:GO:0048708
            HOGENOM:HOG000236346 HOVERGEN:HBG005960 GO:GO:2000974 GO:GO:0072049
            GO:GO:0072282 GO:GO:2000737 GO:GO:0072050 EMBL:DQ272660
            EMBL:AL139246 IPI:IPI00373977 RefSeq:NP_001010926.1
            UniGene:Hs.57971 ProteinModelPortal:Q5TA89 SMR:Q5TA89 STRING:Q5TA89
            PhosphoSite:Q5TA89 DMDM:74745795 PRIDE:Q5TA89
            Ensembl:ENST00000378453 GeneID:388585 KEGG:hsa:388585
            UCSC:uc001ajn.3 CTD:388585 GeneCards:GC01M002450 HGNC:HGNC:19764
            MIM:607348 neXtProt:NX_Q5TA89 PharmGKB:PA134967985 eggNOG:NOG83691
            InParanoid:Q5TA89 KO:K06055 OMA:QFLTLHS OrthoDB:EOG495ZT5
            GenomeRNAi:388585 NextBio:102194 Bgee:Q5TA89 CleanEx:HS_HES5
            Genevestigator:Q5TA89 GO:GO:0021781 GO:GO:2000981 GO:GO:0072086
            Uniprot:Q5TA89
        Length = 166

 Score = 143 (55.4 bits), Expect = 5.2e-10, P = 5.2e-10
 Identities = 43/127 (33%), Positives = 69/127 (54%)

Query:     2 STLSIEVVYPE----VMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADIL 57
             ST+++E++ P+    + KP++E+ RR RIN  +++LK ++         N SKLEKADIL
Sbjct:     4 STVAVELLSPKEKNRLRKPVVEKMRRDRINSSIEQLKLLLEQEFARHQPN-SKLEKADIL 62

Query:    58 ELTVRHL-HKLRRQQSLGLTPEAAYADRFKAGFTHCAAEVSQYL----ASSMQQ----HQ 108
             E+ V +L H      + G  P++ + D +  G++ C  E  Q+L    AS  Q     H 
Sbjct:    63 EMAVSYLKHSKAFVAAAG--PKSLHQD-YSEGYSWCLQEAVQFLTLHAASDTQMKLLYHF 119

Query:   109 QQPSTEP 115
             Q+P   P
Sbjct:   120 QRPPAAP 126


>UNIPROTKB|A1L3K9 [details] [associations]
            symbol:LOC100037036 "LOC100037036 protein" species:8355
            "Xenopus laevis" [GO:0005515 "protein binding" evidence=IPI]
            [GO:0043425 "bHLH transcription factor binding" evidence=IPI]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 GO:GO:0005634
            GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 Gene3D:4.10.280.10
            SUPFAM:SSF47459 HOVERGEN:HBG107098 EMBL:BC130161 UniGene:Xl.74933
            Uniprot:A1L3K9
        Length = 222

 Score = 141 (54.7 bits), Expect = 8.4e-10, P = 8.4e-10
 Identities = 33/94 (35%), Positives = 59/94 (62%)

Query:    12 EVMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRRQQ 71
             +  KP++E++RRARIN  L EL+ I+     ++ E  +K+E A++L+LTV+ + ++ R +
Sbjct:    42 QTRKPLVEKRRRARINESLQELRGIL-----SDNEFQTKIENAEVLDLTVKRVERILRNR 96

Query:    72 SLG---LTPEAAYADRFKAGFTHCAAEVSQYLAS 102
             +     L  EA+  +RF AG+  C  EV  +++S
Sbjct:    97 TAEADRLQREAS--ERFAAGYIQCMHEVHTFVSS 128


>ZFIN|ZDB-GENE-030707-2 [details] [associations]
            symbol:her15.1 "hairy and enhancer of split-related
            15.1" species:7955 "Danio rerio" [GO:0046983 "protein dimerization
            activity" evidence=IEA] [GO:0007420 "brain development"
            evidence=IDA] [GO:0007219 "Notch signaling pathway" evidence=IGI]
            [GO:0001654 "eye development" evidence=IDA] [GO:0001756
            "somitogenesis" evidence=IDA] InterPro:IPR011598 Pfam:PF00010
            PROSITE:PS50888 SMART:SM00353 ZFIN:ZDB-GENE-030707-2 GO:GO:0007420
            GO:GO:0007219 GO:GO:0001756 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GO:GO:0001654 GeneTree:ENSGT00700000104168 HOGENOM:HOG000236346
            HOVERGEN:HBG005960 OrthoDB:EOG495ZT5 eggNOG:NOG313575 EMBL:AL929185
            EMBL:BC133128 EMBL:AY264404 EMBL:AY576277 IPI:IPI00495625
            RefSeq:NP_878295.1 RefSeq:XP_003199574.1 UniGene:Dr.117051
            Ensembl:ENSDART00000055707 GeneID:100534909 GeneID:359836
            KEGG:dre:100534909 KEGG:dre:359836 CTD:359836 InParanoid:Q7T3J0
            OMA:PAYMTEY NextBio:20812762 Uniprot:Q7T3J0
        Length = 149

 Score = 141 (54.7 bits), Expect = 8.4e-10, P = 8.4e-10
 Identities = 39/116 (33%), Positives = 63/116 (54%)

Query:    12 EVMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRRQQ 71
             ++ KP++E+ RR RIN C+++LK ++    Q +  N +KLEKADILE+TV  L    +QQ
Sbjct:    19 KLRKPVVEKMRRDRINNCIEQLKSMLEKEFQQQDPN-AKLEKADILEMTVVFL----KQQ 73

Query:    72 SLGLTPEAAYADRFKAGFTHCAAEVSQYLASSMQ------QHQQQPSTEPTIDPSS 121
                 TP+ A  +    G++ C  E   +L+   +      Q + Q S  P +  +S
Sbjct:    74 LRPKTPQNAQIE----GYSQCWRETISFLSVGSEAVAQRLQQEAQRSAAPELTHTS 125


>ZFIN|ZDB-GENE-050228-1 [details] [associations]
            symbol:her13 "hairy-related 13" species:7955 "Danio
            rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0046983 "protein dimerization activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] InterPro:IPR003650 InterPro:IPR011598
            Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054
            SMART:SM00353 ZFIN:ZDB-GENE-050228-1 GO:GO:0005634 GO:GO:0006355
            GO:GO:0003677 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
            eggNOG:NOG241578 HOGENOM:HOG000236346 HOVERGEN:HBG107098
            OrthoDB:EOG4G7C0H EMBL:BC092944 IPI:IPI00611159
            RefSeq:NP_001017901.1 UniGene:Dr.151885 GeneID:550600
            KEGG:dre:550600 CTD:550600 InParanoid:Q568A5 NextBio:20879837
            Uniprot:Q568A5
        Length = 224

 Score = 141 (54.7 bits), Expect = 8.4e-10, P = 8.4e-10
 Identities = 33/91 (36%), Positives = 56/91 (61%)

Query:    15 KPMLERKRRARINRCLDELKEIMVTS-LQAEGENVSKLEKADILELTVRHLHKL--RRQQ 71
             KP++E+KRRARIN  L +L+ ++  + LQ      +K+E A++LELTV+ +  +   R Q
Sbjct:    29 KPIVEKKRRARINESLQDLRTLLTNNDLQ------TKMENAEVLELTVKRVESILQSRSQ 82

Query:    72 SLGLTPEAAYADRFKAGFTHCAAEVSQYLAS 102
               G   + A ++RF AG+  C  EV  ++++
Sbjct:    83 ETGTVTQEA-SERFAAGYIQCMHEVHTFVST 112


>UNIPROTKB|Q5D212 [details] [associations]
            symbol:HES5 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
            "protein dimerization activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0001078 "RNA polymerase II core promoter proximal
            region sequence-specific DNA binding transcription factor activity
            involved in negative regulation of transcription" evidence=IEA]
            [GO:0006461 "protein complex assembly" evidence=IEA] [GO:0007155
            "cell adhesion" evidence=IEA] [GO:0007219 "Notch signaling pathway"
            evidence=IEA] [GO:0007224 "smoothened signaling pathway"
            evidence=IEA] [GO:0021537 "telencephalon development" evidence=IEA]
            [GO:0021781 "glial cell fate commitment" evidence=IEA] [GO:0021915
            "neural tube development" evidence=IEA] [GO:0022010 "central
            nervous system myelination" evidence=IEA] [GO:0030513 "positive
            regulation of BMP signaling pathway" evidence=IEA] [GO:0031641
            "regulation of myelination" evidence=IEA] [GO:0042517 "positive
            regulation of tyrosine phosphorylation of Stat3 protein"
            evidence=IEA] [GO:0042668 "auditory receptor cell fate
            determination" evidence=IEA] [GO:0043010 "camera-type eye
            development" evidence=IEA] [GO:0045747 "positive regulation of
            Notch signaling pathway" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0048469 "cell maturation" evidence=IEA]
            [GO:0048661 "positive regulation of smooth muscle cell
            proliferation" evidence=IEA] [GO:0048708 "astrocyte
            differentiation" evidence=IEA] [GO:0048712 "negative regulation of
            astrocyte differentiation" evidence=IEA] [GO:0048715 "negative
            regulation of oligodendrocyte differentiation" evidence=IEA]
            [GO:0051216 "cartilage development" evidence=IEA] [GO:0072049
            "comma-shaped body morphogenesis" evidence=IEA] [GO:0072050
            "S-shaped body morphogenesis" evidence=IEA] [GO:0072086
            "specification of loop of Henle identity" evidence=IEA] [GO:0072282
            "metanephric nephron tubule morphogenesis" evidence=IEA]
            [GO:0097150 "neuronal stem cell maintenance" evidence=IEA]
            [GO:2000737 "negative regulation of stem cell differentiation"
            evidence=IEA] [GO:2000981 "negative regulation of inner ear
            receptor cell differentiation" evidence=IEA] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 GO:GO:0005634 GO:GO:0006461
            GO:GO:0003677 GO:GO:0001078 GO:GO:0048661 GO:GO:0045944
            GO:GO:0007155 GO:GO:0007219 GO:GO:0045747 GO:GO:0030513
            Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0007224 GO:GO:0042517
            GO:GO:0031641 GeneTree:ENSGT00700000104168 HOGENOM:HOG000236346
            HOVERGEN:HBG005960 GO:GO:2000737 CTD:388585 eggNOG:NOG83691
            KO:K06055 OMA:QFLTLHS OrthoDB:EOG495ZT5 EMBL:AADN02040879
            EMBL:AY916777 IPI:IPI00595214 RefSeq:NP_001012713.1
            UniGene:Gga.11242 Ensembl:ENSGALT00000001715 GeneID:419392
            KEGG:gga:419392 InParanoid:Q5D212 NextBio:20822454 Uniprot:Q5D212
        Length = 157

 Score = 140 (54.3 bits), Expect = 1.1e-09, P = 1.1e-09
 Identities = 37/104 (35%), Positives = 59/104 (56%)

Query:     2 STLSIEVVYPE----VMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADIL 57
             S LS+E++ P+    + KP++E+ RR RIN  +++LK ++    Q    N SKLEKADIL
Sbjct:     4 SALSLEILTPKEKNRLRKPIVEKLRRDRINSSIEQLKLLLEKEFQRHQPN-SKLEKADIL 62

Query:    58 ELTVRHLHKLRRQQSLGLTPEAAYADRFKAGFTHCAAEVSQYLA 101
             E+TV +L   R   +   + +  Y +    G+  C  E  Q+L+
Sbjct:    63 EMTVSYLKYSRAFAASAKSLQQDYCE----GYAWCLKEALQFLS 102


>MGI|MGI:104876 [details] [associations]
            symbol:Hes5 "hairy and enhancer of split 5 (Drosophila)"
            species:10090 "Mus musculus" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter"
            evidence=IGI;ISO;IDA;IMP] [GO:0001078 "RNA polymerase II core
            promoter proximal region sequence-specific DNA binding
            transcription factor activity involved in negative regulation of
            transcription" evidence=IDA] [GO:0002062 "chondrocyte
            differentiation" evidence=IMP] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003682 "chromatin binding" evidence=ISO]
            [GO:0003690 "double-stranded DNA binding" evidence=ISO] [GO:0005515
            "protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0006461 "protein complex assembly" evidence=IDA]
            [GO:0007155 "cell adhesion" evidence=IGI] [GO:0007219 "Notch
            signaling pathway" evidence=ISO;IMP;NAS;TAS] [GO:0007224
            "smoothened signaling pathway" evidence=IDA] [GO:0007275
            "multicellular organismal development" evidence=IEA] [GO:0007399
            "nervous system development" evidence=IEA] [GO:0007420 "brain
            development" evidence=IMP] [GO:0008134 "transcription factor
            binding" evidence=NAS] [GO:0008284 "positive regulation of cell
            proliferation" evidence=ISO] [GO:0014003 "oligodendrocyte
            development" evidence=IMP] [GO:0021537 "telencephalon development"
            evidence=IGI] [GO:0021781 "glial cell fate commitment"
            evidence=IMP] [GO:0021861 "forebrain radial glial cell
            differentiation" evidence=ISO] [GO:0021915 "neural tube
            development" evidence=IGI] [GO:0022010 "central nervous system
            myelination" evidence=IMP] [GO:0030154 "cell differentiation"
            evidence=IEA] [GO:0030513 "positive regulation of BMP signaling
            pathway" evidence=IGI] [GO:0031641 "regulation of myelination"
            evidence=IMP] [GO:0042491 "auditory receptor cell differentiation"
            evidence=IMP] [GO:0042517 "positive regulation of tyrosine
            phosphorylation of Stat3 protein" evidence=IDA] [GO:0042668
            "auditory receptor cell fate determination" evidence=IMP]
            [GO:0043010 "camera-type eye development" evidence=IMP] [GO:0045595
            "regulation of cell differentiation" evidence=IMP] [GO:0045665
            "negative regulation of neuron differentiation" evidence=IGI;IMP]
            [GO:0045747 "positive regulation of Notch signaling pathway"
            evidence=IMP] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=ISO;IMP] [GO:0045893 "positive regulation
            of transcription, DNA-dependent" evidence=IMP] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IGI] [GO:0046427 "positive regulation of
            JAK-STAT cascade" evidence=IDA] [GO:0046983 "protein dimerization
            activity" evidence=IEA] [GO:0048469 "cell maturation" evidence=IGI]
            [GO:0048661 "positive regulation of smooth muscle cell
            proliferation" evidence=ISO] [GO:0048708 "astrocyte
            differentiation" evidence=IDA] [GO:0048712 "negative regulation of
            astrocyte differentiation" evidence=IDA] [GO:0048715 "negative
            regulation of oligodendrocyte differentiation" evidence=IMP;IDA]
            [GO:0050767 "regulation of neurogenesis" evidence=IGI] [GO:0051216
            "cartilage development" evidence=ISO;IMP] [GO:0097150 "neuronal
            stem cell maintenance" evidence=ISO;IMP] [GO:2000737 "negative
            regulation of stem cell differentiation" evidence=ISO] [GO:2000974
            "negative regulation of pro-B cell differentiation" evidence=ISO]
            [GO:2000978 "negative regulation of forebrain neuron
            differentiation" evidence=ISO] [GO:2000981 "negative regulation of
            inner ear receptor cell differentiation" evidence=IMP]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 MGI:MGI:104876
            GO:GO:0005634 GO:GO:0006461 GO:GO:0001078 GO:GO:0048661
            GO:GO:0045944 GO:GO:0007155 GO:GO:0007219 GO:GO:0045747
            GO:GO:0003682 GO:GO:0043010 GO:GO:0003690 GO:GO:0030513
            GO:GO:0051216 GO:GO:0022010 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GO:GO:0008134 GO:GO:0021915 GO:GO:0007224 GO:GO:0042517
            GO:GO:0048712 GO:GO:0042668 GO:GO:0048469 InterPro:IPR018352
            SMART:SM00511 GO:GO:0021537 GO:GO:0048715 GO:GO:0031641
            GO:GO:0097150 GO:GO:0048708 HOGENOM:HOG000236346 HOVERGEN:HBG005960
            GO:GO:2000974 GO:GO:0072049 GO:GO:0072282 GO:GO:2000737
            GO:GO:0072050 CTD:388585 eggNOG:NOG83691 KO:K06055 OMA:QFLTLHS
            OrthoDB:EOG495ZT5 GO:GO:0021781 GO:GO:2000981 GO:GO:0072086
            EMBL:D32132 EMBL:AK078170 EMBL:AK087508 IPI:IPI00136148 PIR:A55438
            RefSeq:NP_034549.1 UniGene:Mm.137268 ProteinModelPortal:P70120
            SMR:P70120 STRING:P70120 PhosphoSite:P70120 PRIDE:P70120
            Ensembl:ENSMUST00000049621 GeneID:15208 KEGG:mmu:15208
            InParanoid:P70120 NextBio:287769 Bgee:P70120 CleanEx:MM_HES5
            Genevestigator:P70120 GermOnline:ENSMUSG00000048001 Uniprot:P70120
        Length = 167

 Score = 140 (54.3 bits), Expect = 1.1e-09, P = 1.1e-09
 Identities = 35/103 (33%), Positives = 61/103 (59%)

Query:     2 STLSIEVVYPE----VMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADIL 57
             ST+++E++ P+    + KP++E+ RR RIN  +++LK ++         N SKLEKADIL
Sbjct:     4 STVAVEMLSPKEKNRLRKPVVEKMRRDRINSSIEQLKLLLEQEFARHQPN-SKLEKADIL 62

Query:    58 ELTVRHLHKLRRQQSLGLTPEAAYADRFKAGFTHCAAEVSQYL 100
             E+ V +L K  +  +    P++ + D +  G++ C  E  Q+L
Sbjct:    63 EMAVSYL-KHSKAFAAAAGPKSLHQD-YSEGYSWCLQEAVQFL 103


>RGD|621340 [details] [associations]
            symbol:Hes5 "hairy and enhancer of split 5 (Drosophila)"
            species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
            of transcription from RNA polymerase II promoter" evidence=ISO;IDA]
            [GO:0001078 "RNA polymerase II core promoter proximal region
            sequence-specific DNA binding transcription factor activity
            involved in negative regulation of transcription" evidence=ISO;ISS]
            [GO:0002062 "chondrocyte differentiation" evidence=ISO;ISS]
            [GO:0003682 "chromatin binding" evidence=IDA] [GO:0003690
            "double-stranded DNA binding" evidence=IDA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006461 "protein complex assembly"
            evidence=ISO;ISS] [GO:0007155 "cell adhesion" evidence=ISO;ISS]
            [GO:0007219 "Notch signaling pathway" evidence=ISO;ISS] [GO:0007224
            "smoothened signaling pathway" evidence=ISO;ISS] [GO:0007420 "brain
            development" evidence=ISO;ISS] [GO:0008284 "positive regulation of
            cell proliferation" evidence=ISO;ISS] [GO:0014003 "oligodendrocyte
            development" evidence=ISO;ISS] [GO:0021537 "telencephalon
            development" evidence=ISO;ISS] [GO:0021781 "glial cell fate
            commitment" evidence=ISO;ISS] [GO:0021861 "forebrain radial glial
            cell differentiation" evidence=IDA] [GO:0021915 "neural tube
            development" evidence=ISO;ISS] [GO:0022010 "central nervous system
            myelination" evidence=ISO;ISS] [GO:0030182 "neuron differentiation"
            evidence=IEP] [GO:0030513 "positive regulation of BMP signaling
            pathway" evidence=ISO;ISS] [GO:0031641 "regulation of myelination"
            evidence=ISO;ISS] [GO:0042491 "auditory receptor cell
            differentiation" evidence=ISO;ISS] [GO:0042517 "positive regulation
            of tyrosine phosphorylation of Stat3 protein" evidence=ISO;ISS]
            [GO:0042668 "auditory receptor cell fate determination"
            evidence=IEA;ISO] [GO:0043010 "camera-type eye development"
            evidence=ISO;ISS] [GO:0045595 "regulation of cell differentiation"
            evidence=ISO;ISS] [GO:0045665 "negative regulation of neuron
            differentiation" evidence=ISO;ISS] [GO:0045747 "positive regulation
            of Notch signaling pathway" evidence=IEA;ISO] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=ISO;IDA]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=ISO;ISS] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0046427
            "positive regulation of JAK-STAT cascade" evidence=ISO;ISS]
            [GO:0046983 "protein dimerization activity" evidence=IEA]
            [GO:0048469 "cell maturation" evidence=ISO;ISS] [GO:0048661
            "positive regulation of smooth muscle cell proliferation"
            evidence=ISO;ISS] [GO:0048708 "astrocyte differentiation"
            evidence=ISO;ISS] [GO:0048712 "negative regulation of astrocyte
            differentiation" evidence=ISO;ISS] [GO:0048715 "negative regulation
            of oligodendrocyte differentiation" evidence=ISO;ISS] [GO:0050767
            "regulation of neurogenesis" evidence=ISO;ISS] [GO:0051216
            "cartilage development" evidence=ISO;ISS] [GO:0072049 "comma-shaped
            body morphogenesis" evidence=IEA] [GO:0072050 "S-shaped body
            morphogenesis" evidence=IEA] [GO:0072086 "specification of loop of
            Henle identity" evidence=IEA] [GO:0072282 "metanephric nephron
            tubule morphogenesis" evidence=IEA] [GO:0097150 "neuronal stem cell
            maintenance" evidence=ISO;IDA] [GO:2000737 "negative regulation of
            stem cell differentiation" evidence=ISO;ISS] [GO:2000974 "negative
            regulation of pro-B cell differentiation" evidence=IMP] [GO:2000978
            "negative regulation of forebrain neuron differentiation"
            evidence=IDA] [GO:2000981 "negative regulation of inner ear
            receptor cell differentiation" evidence=IEA;ISO] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 RGD:621340 GO:GO:0005634
            GO:GO:0045893 GO:GO:0006461 GO:GO:0001078 GO:GO:0048661
            GO:GO:0045944 GO:GO:0007155 GO:GO:0007219 GO:GO:0045747
            GO:GO:0003682 GO:GO:0043010 GO:GO:0003690 GO:GO:0030513
            GO:GO:0051216 GO:GO:0022010 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GO:GO:0021915 GO:GO:0007224 GO:GO:0042517 GO:GO:0048712
            GO:GO:0042668 GO:GO:0048469 InterPro:IPR018352 SMART:SM00511
            GO:GO:0021537 GO:GO:0048715 GO:GO:0031641 GO:GO:0042491
            GO:GO:0097150 GO:GO:0021861 GeneTree:ENSGT00700000104168
            GO:GO:0048708 HOGENOM:HOG000236346 HOVERGEN:HBG005960 GO:GO:2000978
            GO:GO:2000974 GO:GO:0072049 GO:GO:0072282 GO:GO:2000737
            GO:GO:0072050 CTD:388585 eggNOG:NOG83691 KO:K06055 OMA:QFLTLHS
            OrthoDB:EOG495ZT5 GO:GO:0021781 GO:GO:2000981 GO:GO:0072086
            EMBL:D12516 IPI:IPI00206887 PIR:A45119 RefSeq:NP_077359.1
            UniGene:Rn.22422 ProteinModelPortal:Q03062 MINT:MINT-3376257
            STRING:Q03062 PRIDE:Q03062 Ensembl:ENSRNOT00000018769 GeneID:79225
            KEGG:rno:79225 InParanoid:Q03062 NextBio:614656
            Genevestigator:Q03062 GermOnline:ENSRNOG00000013850 Uniprot:Q03062
        Length = 166

 Score = 140 (54.3 bits), Expect = 1.1e-09, P = 1.1e-09
 Identities = 35/103 (33%), Positives = 61/103 (59%)

Query:     2 STLSIEVVYPE----VMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADIL 57
             ST+++E++ P+    + KP++E+ RR RIN  +++LK ++         N SKLEKADIL
Sbjct:     4 STVAVEMLSPKEKNRLRKPVVEKMRRDRINSSIEQLKLLLEQEFARHQPN-SKLEKADIL 62

Query:    58 ELTVRHLHKLRRQQSLGLTPEAAYADRFKAGFTHCAAEVSQYL 100
             E+ V +L K  +  +    P++ + D +  G++ C  E  Q+L
Sbjct:    63 EMAVSYL-KHSKAFAAAAGPKSLHQD-YSEGYSWCLQEAVQFL 103


>UNIPROTKB|Q96HZ4 [details] [associations]
            symbol:HES6 "Transcription cofactor HES-6" species:9606
            "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
            "protein dimerization activity" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0006357 "regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0007399 "nervous system
            development" evidence=IEA] [GO:0030154 "cell differentiation"
            evidence=IEA] [GO:0005667 "transcription factor complex"
            evidence=ISS] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=NAS] [GO:0003712 "transcription cofactor
            activity" evidence=ISS] [GO:0008134 "transcription factor binding"
            evidence=NAS] InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010
            Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353
            GO:GO:0007399 GO:GO:0030154 GO:GO:0003677 EMBL:CH471063
            GO:GO:0003700 GO:GO:0006357 GO:GO:0006351 GO:GO:0005667
            GO:GO:0003712 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0008134
            eggNOG:NOG241578 EMBL:AC016757 HOGENOM:HOG000236346 KO:K09087
            EMBL:AB035179 EMBL:AF260237 EMBL:AK075040 EMBL:AK293111
            EMBL:BC007939 IPI:IPI00452727 IPI:IPI00452728 IPI:IPI00915924
            RefSeq:NP_001136325.1 RefSeq:NP_061115.2 UniGene:Hs.42949
            ProteinModelPortal:Q96HZ4 SMR:Q96HZ4 STRING:Q96HZ4
            PhosphoSite:Q96HZ4 DMDM:50400609 PRIDE:Q96HZ4
            Ensembl:ENST00000272937 Ensembl:ENST00000409002
            Ensembl:ENST00000409160 GeneID:55502 KEGG:hsa:55502 UCSC:uc002vxz.3
            UCSC:uc002vya.3 UCSC:uc002vyb.2 CTD:55502 GeneCards:GC02M239166
            HGNC:HGNC:18254 HPA:CAB034351 MIM:610331 neXtProt:NX_Q96HZ4
            PharmGKB:PA29253 HOVERGEN:HBG107098 InParanoid:Q96HZ4 OMA:EGSSFQD
            OrthoDB:EOG4G7C0H PhylomeDB:Q96HZ4 ChiTaRS:HES6 GenomeRNAi:55502
            NextBio:59883 ArrayExpress:Q96HZ4 Bgee:Q96HZ4 CleanEx:HS_HES6
            Genevestigator:Q96HZ4 GermOnline:ENSG00000144485 Uniprot:Q96HZ4
        Length = 224

 Score = 140 (54.3 bits), Expect = 1.1e-09, P = 1.1e-09
 Identities = 34/89 (38%), Positives = 55/89 (61%)

Query:    15 KPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRRQQSLG 74
             KP++E+KRRARIN  L EL+ ++     A  E  +KLE A++LELTVR +  + R ++  
Sbjct:    30 KPLVEKKRRARINESLQELRLLL-----AGAEVQAKLENAEVLELTVRRVQGVLRGRARE 84

Query:    75 LTP-EAAYADRFKAGFTHCAAEVSQYLAS 102
                 +A  ++RF AG+  C  EV  ++++
Sbjct:    85 REQLQAEASERFAAGYIQCMHEVHTFVST 113


>MGI|MGI:1859852 [details] [associations]
            symbol:Hes6 "hairy and enhancer of split 6 (Drosophila)"
            species:10090 "Mus musculus" [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IDA] [GO:0003712
            "transcription cofactor activity" evidence=IDA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0005667 "transcription factor complex"
            evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0006357 "regulation of
            transcription from RNA polymerase II promoter" evidence=IDA;IMP]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0007399 "nervous system development" evidence=IMP] [GO:0008134
            "transcription factor binding" evidence=NAS] [GO:0030154 "cell
            differentiation" evidence=IDA] [GO:0046983 "protein dimerization
            activity" evidence=IEA] InterPro:IPR003650 InterPro:IPR011598
            Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054
            SMART:SM00353 MGI:MGI:1859852 GO:GO:0007399 GO:GO:0030154
            GO:GO:0003677 GO:GO:0003700 GO:GO:0006357 GO:GO:0006351
            GO:GO:0005667 GO:GO:0003712 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GO:GO:0008134 GeneTree:ENSGT00700000104130 eggNOG:NOG241578
            HOGENOM:HOG000236346 KO:K09087 CTD:55502 HOVERGEN:HBG107098
            OMA:EGSSFQD OrthoDB:EOG4G7C0H ChiTaRS:HES6 EMBL:AB035178
            EMBL:AF247040 EMBL:AF260236 EMBL:AK013443 EMBL:AK076135
            EMBL:AK155340 EMBL:BC012897 IPI:IPI00119301 RefSeq:NP_062352.1
            UniGene:Mm.280029 ProteinModelPortal:Q9JHE6 SMR:Q9JHE6
            STRING:Q9JHE6 PhosphoSite:Q9JHE6 PRIDE:Q9JHE6
            Ensembl:ENSMUST00000086851 GeneID:55927 KEGG:mmu:55927
            UCSC:uc007cau.1 InParanoid:Q9JHE6 NextBio:311596 Bgee:Q9JHE6
            CleanEx:MM_HES6 Genevestigator:Q9JHE6 GermOnline:ENSMUSG00000067071
            Uniprot:Q9JHE6
        Length = 224

 Score = 140 (54.3 bits), Expect = 1.1e-09, P = 1.1e-09
 Identities = 36/90 (40%), Positives = 55/90 (61%)

Query:    15 KPMLERKRRARINRCLDELKEIMV-TSLQAEGENVSKLEKADILELTVRHLH-KLRRQQS 72
             KP++E+KRRARIN  L EL+ ++  T +QA      KLE A++LELTVR +   LR +  
Sbjct:    30 KPLVEKKRRARINESLQELRLLLAGTEVQA------KLENAEVLELTVRRVQGALRGRAR 83

Query:    73 LGLTPEAAYADRFKAGFTHCAAEVSQYLAS 102
                  +A  ++RF AG+  C  EV  ++++
Sbjct:    84 EREQLQAEASERFAAGYIQCMHEVHTFVST 113


>UNIPROTKB|F1SIU5 [details] [associations]
            symbol:HES6 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0030154 "cell differentiation" evidence=IEA]
            [GO:0007399 "nervous system development" evidence=IEA] [GO:0006357
            "regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0005667 "transcription factor complex"
            evidence=IEA] [GO:0003712 "transcription cofactor activity"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
            dimerization activity" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010
            Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353
            GO:GO:0007399 GO:GO:0030154 GO:GO:0003677 GO:GO:0003700
            GO:GO:0006357 GO:GO:0006351 GO:GO:0005667 GO:GO:0003712
            Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00700000104130
            KO:K09087 OMA:EGSSFQD EMBL:CU929385 RefSeq:XP_003359740.1
            Ensembl:ENSSSCT00000017797 GeneID:100622397 KEGG:ssc:100622397
            Uniprot:F1SIU5
        Length = 224

 Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
 Identities = 35/89 (39%), Positives = 54/89 (60%)

Query:    15 KPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLH-KLRRQQSL 73
             KP++E+KRRARIN  L EL+ ++     A  E  +KLE A++LELTVR +   LR +   
Sbjct:    30 KPLVEKKRRARINESLQELRLLL-----AGAEVQAKLENAEVLELTVRRVQGALRGRARE 84

Query:    74 GLTPEAAYADRFKAGFTHCAAEVSQYLAS 102
                 +A  ++RF AG+  C  EV  ++++
Sbjct:    85 REQLQAEASERFAAGYIQCMHEVHTFVST 113


>UNIPROTKB|F1MWE6 [details] [associations]
            symbol:HES6 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0030154 "cell differentiation" evidence=IEA]
            [GO:0007399 "nervous system development" evidence=IEA] [GO:0006357
            "regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0005667 "transcription factor complex"
            evidence=IEA] [GO:0003712 "transcription cofactor activity"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
            dimerization activity" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010
            Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353
            GO:GO:0007399 GO:GO:0030154 GO:GO:0003677 GO:GO:0003700
            GO:GO:0006357 GO:GO:0006351 GO:GO:0005667 GO:GO:0003712
            Gene3D:4.10.280.10 SUPFAM:SSF47459 GeneTree:ENSGT00700000104130
            OMA:EGSSFQD EMBL:DAAA02009388 IPI:IPI00717724 UniGene:Bt.13922
            Ensembl:ENSBTAT00000013017 Uniprot:F1MWE6
        Length = 225

 Score = 139 (54.0 bits), Expect = 1.5e-09, P = 1.5e-09
 Identities = 35/89 (39%), Positives = 54/89 (60%)

Query:    15 KPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLH-KLRRQQSL 73
             KP++E+KRRARIN  L EL+ ++     A  E  +KLE A++LELTVR +   LR +   
Sbjct:    30 KPLVEKKRRARINESLQELRLLL-----AGAEVQAKLENAEVLELTVRRVQGALRGRARE 84

Query:    74 GLTPEAAYADRFKAGFTHCAAEVSQYLAS 102
                 +A  ++RF AG+  C  EV  ++++
Sbjct:    85 REQLQAEASERFAAGYIQCMHEVHTFVST 113


>UNIPROTKB|D2HYE8 [details] [associations]
            symbol:HEY1 "Uncharacterized protein" species:9646
            "Ailuropoda melanoleuca" [GO:0003198 "epithelial to mesenchymal
            transition involved in endocardial cushion formation" evidence=ISS]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 GO:GO:0005634
            GO:GO:0007219 GO:GO:0003700 GO:GO:0006351 GO:GO:0001525
            GO:GO:0002076 GO:GO:0060840 GO:GO:0045669 GO:GO:0001570
            Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0009948 InterPro:IPR018352
            SMART:SM00511 GO:GO:0045746 GO:GO:0000988 GO:GO:0003222
            GeneTree:ENSGT00700000104130 GO:GO:0003199 GO:GO:0003198
            GO:GO:2000678 HOGENOM:HOG000286035 OMA:AHPDYSS GO:GO:0035939
            GO:GO:2000820 EMBL:ACTA01043244 EMBL:GL193697
            Ensembl:ENSAMET00000019253 Uniprot:D2HYE8
        Length = 308

 Score = 143 (55.4 bits), Expect = 1.8e-09, P = 1.8e-09
 Identities = 34/102 (33%), Positives = 61/102 (59%)

Query:     3 TLSIEVVYPEVMKPMLERKRRARINRCLDELKEIMVTSLQAE--GENVSKLEKADILELT 60
             T S +++  +  + ++E++RR RIN  L EL+ ++ ++ + +   +  +KLEKA+IL++T
Sbjct:    42 TTSSQILARKRRRGIIEKRRRDRINNSLSELRRLVPSAFEKQVMEKGSAKLEKAEILQMT 101

Query:    61 VRHLHKLRRQQSLGLTPEAAYADRFKA-GFTHCAAEVSQYLA 101
             V HL  L      G     A A  +++ GF  C AEV++YL+
Sbjct:   102 VDHLKMLHTAGGKGYFDAHALAMDYRSLGFRECLAEVARYLS 143


>ZFIN|ZDB-GENE-000607-70 [details] [associations]
            symbol:hey1 "hairy/enhancer-of-split related with
            YRPW motif 1" species:7955 "Danio rerio" [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0046983 "protein
            dimerization activity" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007219
            "Notch signaling pathway" evidence=IEA] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 ZFIN:ZDB-GENE-000607-70 GO:GO:0007275
            GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0007219
            GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR018352
            SMART:SM00511 GeneTree:ENSGT00700000104130 CTD:23462
            eggNOG:NOG241271 HOGENOM:HOG000286035 KO:K09091 OMA:AHPDYSS
            OrthoDB:EOG4GB77H EMBL:AJ510221 EMBL:BC095317 IPI:IPI00484198
            RefSeq:NP_997726.1 UniGene:Dr.19915 ProteinModelPortal:Q8AXV6
            SMR:Q8AXV6 STRING:Q8AXV6 PRIDE:Q8AXV6 Ensembl:ENSDART00000103640
            GeneID:58008 KEGG:dre:58008 HOVERGEN:HBG094279 InParanoid:Q8AXV6
            NextBio:20891992 ArrayExpress:Q8AXV6 Bgee:Q8AXV6 Uniprot:Q8AXV6
        Length = 317

 Score = 142 (55.0 bits), Expect = 2.5e-09, P = 2.5e-09
 Identities = 32/86 (37%), Positives = 52/86 (60%)

Query:    17 MLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRRQQSLGLT 76
             ++E++RR RIN  L EL+ ++ ++ + +G   +KLEKA+IL++TV HL  L      G  
Sbjct:    55 IIEKRRRDRINNSLSELRRLVPSAFEKQGS--AKLEKAEILQMTVDHLKMLHAAGGKGYF 112

Query:    77 PEAAYADRFKA-GFTHCAAEVSQYLA 101
                A A  ++  GF  C AE ++YL+
Sbjct:   113 DAHALAMDYRGLGFRECLAETARYLS 138


>UNIPROTKB|F1RIM0 [details] [associations]
            symbol:HES3 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0060164 "regulation of timing of neuron
            differentiation" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0030901 "midbrain development" evidence=IEA] [GO:0021575
            "hindbrain morphogenesis" evidence=IEA] [GO:0021558 "trochlear
            nerve development" evidence=IEA] [GO:0021557 "oculomotor nerve
            development" evidence=IEA] [GO:0021555 "midbrain-hindbrain boundary
            morphogenesis" evidence=IEA] [GO:0001701 "in utero embryonic
            development" evidence=IEA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0046983 "protein dimerization activity" evidence=IEA]
            InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
            GO:GO:0001701 GO:GO:0045944 GO:GO:0000122 GO:GO:0030901
            Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0021575
            GeneTree:ENSGT00700000104130 GO:GO:0021555 GO:GO:0021557
            GO:GO:0060164 GO:GO:0021558 EMBL:FP102454
            Ensembl:ENSSSCT00000003740 OMA:PLVHERA Uniprot:F1RIM0
        Length = 215

 Score = 136 (52.9 bits), Expect = 2.9e-09, P = 2.9e-09
 Identities = 36/92 (39%), Positives = 55/92 (59%)

Query:    12 EVMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRRQQ 71
             ++ KP++E+KRRARIN  L++LK ++      +     KLEKADILEL+V+++  L+   
Sbjct:    36 KISKPLMEKKRRARINVSLEQLKALLEKHYSHQIRK-RKLEKADILELSVKYVKSLQNSV 94

Query:    72 -----SLGLTPEAAYADRFKAGFTHCAAEVSQ 98
                  S GL P  + A+ + +GF  C   VSQ
Sbjct:    95 QAAPLSPGLWPVPSGAE-YPSGFRGCLPGVSQ 125


>UNIPROTKB|F8VPC9 [details] [associations]
            symbol:HES7 "Transcription factor HES-7" species:9606 "Homo
            sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
            "protein dimerization activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0001501
            "skeletal system development" evidence=IEA] [GO:0001756
            "somitogenesis" evidence=IEA] [GO:0007219 "Notch signaling pathway"
            evidence=IEA] [GO:0036342 "post-anal tail morphogenesis"
            evidence=IEA] [GO:0048511 "rhythmic process" evidence=IEA]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
            GO:GO:0007219 GO:GO:0006351 GO:GO:0048511 GO:GO:0000122
            GO:GO:0001756 GO:GO:0001501 Gene3D:4.10.280.10 SUPFAM:SSF47459
            KO:K09087 EMBL:AC129492 UniGene:Hs.434828 DNASU:84667 GeneID:84667
            KEGG:hsa:84667 CTD:84667 HGNC:HGNC:15977 GenomeRNAi:84667
            NextBio:74661 OMA:LSGFREC IPI:IPI00790026 RefSeq:NP_001159439.1
            ProteinModelPortal:F8VPC9 SMR:F8VPC9 PRIDE:F8VPC9
            Ensembl:ENST00000541682 UCSC:uc002gkb.2 ArrayExpress:F8VPC9
            Bgee:F8VPC9 Uniprot:F8VPC9
        Length = 230

 Score = 121 (47.7 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
 Identities = 24/59 (40%), Positives = 41/59 (69%)

Query:    11 PEVMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRR 69
             P+++KP++E++RR RINR L+EL+ +++   + +     KLEKA+ILE  V +L +  R
Sbjct:    13 PKMLKPLVEKRRRDRINRSLEELRLLLLERTRDQNLRNPKLEKAEILEFAVGYLRERSR 71

 Score = 32 (16.3 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
 Identities = 4/11 (36%), Positives = 9/11 (81%)

Query:   111 PSTEPTIDPSS 121
             P+  P++DP++
Sbjct:   146 PAPRPSLDPAA 156


>ZFIN|ZDB-GENE-030131-3133 [details] [associations]
            symbol:bhlhe40 "basic helix-loop-helix family,
            member e40" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
            activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=IDA] InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010
            Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353
            ZFIN:ZDB-GENE-030131-3133 GO:GO:0005634 GO:GO:0045892 GO:GO:0003677
            GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GeneTree:ENSGT00510000046898 OMA:EQPYFKS HOVERGEN:HBG050685
            EMBL:BX914197 EMBL:BC066738 EMBL:AB212759 IPI:IPI00500842
            UniGene:Dr.78721 STRING:Q6NY50 Ensembl:ENSDART00000026017
            Ensembl:ENSDART00000128382 InParanoid:Q6NY50 Uniprot:Q6NY50
        Length = 403

 Score = 126 (49.4 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
 Identities = 39/103 (37%), Positives = 58/103 (56%)

Query:    17 MLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRH---LHKLRRQQ-- 71
             ++E+KRR RIN C+ +LK+++   L+     +  LEKA +LELT++H   L+ L  QQ  
Sbjct:    56 LIEKKRRDRINECIAQLKDLLPEHLKLT--TLGHLEKAVVLELTLKHVKALNNLLEQQQQ 113

Query:    72 ---SL--GLT-------PEAAYADRFKAGFTHCAAEVSQYLAS 102
                SL  GL        P     + F++GF  CA EV Q+LA+
Sbjct:   114 KIISLQNGLQIGEQGNGPSENSEEMFRSGFHLCAKEVLQFLAN 156

 Score = 36 (17.7 bits), Expect = 4.4e-09, Sum P(2) = 4.4e-09
 Identities = 7/23 (30%), Positives = 12/23 (52%)

Query:    98 QYLASSMQQHQQQPSTEPTIDPS 120
             +Y +S  ++  + PS  P  D S
Sbjct:   267 KYSSSIKEEQDEPPSKRPRSDSS 289


>UNIPROTKB|E1BJY1 [details] [associations]
            symbol:HES7 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0048511 "rhythmic process" evidence=IEA] [GO:0036342
            "post-anal tail morphogenesis" evidence=IEA] [GO:0007219 "Notch
            signaling pathway" evidence=IEA] [GO:0001756 "somitogenesis"
            evidence=IEA] [GO:0001501 "skeletal system development"
            evidence=IEA] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0046983 "protein dimerization activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
            GO:GO:0007219 GO:GO:0006351 GO:GO:0048511 GO:GO:0000122
            GO:GO:0001756 GO:GO:0001501 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GeneTree:ENSGT00700000104130 OMA:LSGFREC EMBL:DAAA02048812
            IPI:IPI00704475 Ensembl:ENSBTAT00000016506 Uniprot:E1BJY1
        Length = 224

 Score = 135 (52.6 bits), Expect = 4.5e-09, P = 4.5e-09
 Identities = 32/94 (34%), Positives = 58/94 (61%)

Query:    11 PEVMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRRQ 70
             P+++KP++E++RR RINR L+EL+ +++   + +     KLEKA+ILE  V +L +  R 
Sbjct:    13 PKMLKPLVEKRRRDRINRSLEELRLLLLERTRDQNLRNPKLEKAEILEFAVGYLRERSRV 72

Query:    71 QSLGL--TP--EA-AYADRFKAGFTHCAAEVSQY 99
             +  G+  +P  +A A A  + +GF  C   ++ +
Sbjct:    73 EPPGVPRSPAQDAEALASCYLSGFRECLLRLAAF 106


>UNIPROTKB|F1SSX6 [details] [associations]
            symbol:HES7 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0048511 "rhythmic process" evidence=IEA] [GO:0036342
            "post-anal tail morphogenesis" evidence=IEA] [GO:0007219 "Notch
            signaling pathway" evidence=IEA] [GO:0001756 "somitogenesis"
            evidence=IEA] [GO:0001501 "skeletal system development"
            evidence=IEA] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0046983 "protein dimerization activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
            GO:GO:0007219 GO:GO:0006351 GO:GO:0048511 GO:GO:0000122
            GO:GO:0001756 GO:GO:0001501 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GeneTree:ENSGT00700000104130 KO:K09087 OMA:LSGFREC EMBL:CU571295
            EMBL:CU914306 RefSeq:XP_003358331.2 Ensembl:ENSSSCT00000019568
            GeneID:100620745 KEGG:ssc:100620745 Uniprot:F1SSX6
        Length = 225

 Score = 135 (52.6 bits), Expect = 4.6e-09, P = 4.6e-09
 Identities = 32/94 (34%), Positives = 58/94 (61%)

Query:    11 PEVMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRRQ 70
             P+++KP++E++RR RINR L+EL+ +++   + +     KLEKA+ILE  V +L +  R 
Sbjct:    13 PKMLKPLVEKRRRDRINRSLEELRLLLLERTRDQNLRNPKLEKAEILEFAVGYLRERSRV 72

Query:    71 QSLGL--TP--EA-AYADRFKAGFTHCAAEVSQY 99
             +  G+  +P  +A A A  + +GF  C   ++ +
Sbjct:    73 EPPGVPRSPAQDAEALASCYLSGFRECLLRLAAF 106


>UNIPROTKB|Q8UW74 [details] [associations]
            symbol:hes7.1-a "Transcription factor HES-7.1-A"
            species:8355 "Xenopus laevis" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IMP]
            [GO:0005634 "nucleus" evidence=ISS] [GO:0030917 "midbrain-hindbrain
            boundary development" evidence=IMP] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=IMP]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 GO:GO:0005634
            GO:GO:0003677 GO:GO:0006351 GO:GO:0000122 Gene3D:4.10.280.10
            SUPFAM:SSF47459 GO:GO:0030917 EMBL:AB071432 EMBL:AB071433
            EMBL:BC170054 ProteinModelPortal:Q8UW74 Uniprot:Q8UW74
        Length = 180

 Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
 Identities = 31/91 (34%), Positives = 56/91 (61%)

Query:    12 EVMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRRQQ 71
             +++KP++E++RR RIN  L++L+  +  +L++E     K+EKA+ILE TV+ L     ++
Sbjct:    15 KLLKPLVEKRRRERINNSLEKLRIFLFQTLKSEKLKNPKVEKAEILECTVQFLQS---RK 71

Query:    72 SLGLTPEAAYADRFKAGFTHCAAEVSQYLAS 102
              L L  EA   + +++GF HC      ++ S
Sbjct:    72 LLPLDREAVDKE-YQSGFQHCLETTLHFMNS 101


>ZFIN|ZDB-GENE-980526-274 [details] [associations]
            symbol:her2 "hairy-related 2" species:7955 "Danio
            rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0046983 "protein dimerization activity" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 ZFIN:ZDB-GENE-980526-274
            GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
            Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR018352 SMART:SM00511
            GeneTree:ENSGT00700000104168 HOGENOM:HOG000236346
            HOVERGEN:HBG005960 eggNOG:NOG313575 EMBL:CU633737 EMBL:BC162968
            EMBL:BC163000 EMBL:X97330 IPI:IPI00492101 RefSeq:NP_571164.1
            UniGene:Dr.135078 UniGene:Dr.75063 Ensembl:ENSDART00000055709
            GeneID:30300 KEGG:dre:30300 CTD:30300 OMA:ILEMAVI NextBio:20806742
            Uniprot:Q90464
        Length = 108

 Score = 134 (52.2 bits), Expect = 4.7e-09, P = 4.7e-09
 Identities = 31/91 (34%), Positives = 54/91 (59%)

Query:    22 RRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRRQQSLGLTPEAAY 81
             RR RIN+C+++LK ++ T ++A  +  SKLEKADILE+ V +L       +   +   A+
Sbjct:     2 RRDRINKCIEQLKILLKTEIKAS-QPCSKLEKADILEMAVIYLKNTADAHARSYSE--AH 58

Query:    82 ADRFKAGFTHCAAEVSQYLASSMQ-QHQQQP 111
             A  +  G++ C  E +++L++  Q Q   +P
Sbjct:    59 AQSYADGYSRCIEETARFLSAHKQTQKHSKP 89


>UNIPROTKB|E1BW65 [details] [associations]
            symbol:LOC419390 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
            "protein dimerization activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] InterPro:IPR003650 InterPro:IPR011598
            Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054
            SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
            GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GeneTree:ENSGT00700000104168 EMBL:AADN02040879 IPI:IPI00685083
            Ensembl:ENSGALT00000035200 ArrayExpress:E1BW65 Uniprot:E1BW65
        Length = 159

 Score = 133 (51.9 bits), Expect = 5.9e-09, P = 5.9e-09
 Identities = 31/90 (34%), Positives = 52/90 (57%)

Query:    12 EVMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRRQQ 71
             ++ KP++E+ RR RIN  +++LK ++    Q    N SKLEKADILE+ V +L K +   
Sbjct:    21 KLRKPVVEKMRRDRINSSIEQLKLLLEKEFQRHQPN-SKLEKADILEMAVSYL-KQQSHL 78

Query:    72 SLGLTPEAAYADRFKAGFTHCAAEVSQYLA 101
              +  +   +Y   F+ G++ C  E   +L+
Sbjct:    79 QMKRSFHKSYQFDFREGYSRCLQEAFHFLS 108


>UNIPROTKB|Q8UW72 [details] [associations]
            symbol:hes7.1-b "Transcription factor HES-7.1-B"
            species:8355 "Xenopus laevis" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IMP]
            [GO:0005634 "nucleus" evidence=ISS] [GO:0030917 "midbrain-hindbrain
            boundary development" evidence=ISS] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=ISS]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 GO:GO:0005634
            GO:GO:0003677 GO:GO:0006351 GO:GO:0000122 Gene3D:4.10.280.10
            SUPFAM:SSF47459 GO:GO:0030917 EMBL:AB071434 RefSeq:NP_001082175.1
            UniGene:Xl.12126 ProteinModelPortal:Q8UW72 GeneID:398267
            KEGG:xla:398267 CTD:398267 Xenbase:XB-GENE-876475 Uniprot:Q8UW72
        Length = 180

 Score = 133 (51.9 bits), Expect = 5.9e-09, P = 5.9e-09
 Identities = 31/91 (34%), Positives = 56/91 (61%)

Query:    12 EVMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRRQQ 71
             +++KP++E++RR RIN  L++L+  +  +L++E     K+EKA+ILE TV+ L     ++
Sbjct:    15 KLLKPLVEKRRRERINNSLEKLRIFLSQTLKSEKLKNPKVEKAEILECTVQFLQS---RK 71

Query:    72 SLGLTPEAAYADRFKAGFTHCAAEVSQYLAS 102
              L L  EA   + +++GF HC      ++ S
Sbjct:    72 LLPLDREAVDKE-YQSGFQHCLETTLHFMNS 101


>UNIPROTKB|Q5TGS1 [details] [associations]
            symbol:HES3 "Transcription factor HES-3" species:9606 "Homo
            sapiens" [GO:0046983 "protein dimerization activity" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0001701 "in utero embryonic development" evidence=IEA]
            [GO:0021555 "midbrain-hindbrain boundary morphogenesis"
            evidence=IEA] [GO:0021557 "oculomotor nerve development"
            evidence=IEA] [GO:0021558 "trochlear nerve development"
            evidence=IEA] [GO:0021575 "hindbrain morphogenesis" evidence=IEA]
            [GO:0030901 "midbrain development" evidence=IEA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0060164 "regulation of timing of neuron
            differentiation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0008134 "transcription factor binding" evidence=NAS]
            InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 PROSITE:PS51054
            SMART:SM00353 GO:GO:0005634 GO:GO:0003677 GO:GO:0001701
            GO:GO:0045944 GO:GO:0006351 GO:GO:0000122 GO:GO:0030901
            Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0008134 GO:GO:0021575
            EMBL:AL031847 GO:GO:0021555 HOGENOM:HOG000236346 GO:GO:0021557
            GO:GO:0060164 GO:GO:0021558 IPI:IPI00376185 RefSeq:NP_001019769.1
            UniGene:Hs.532677 ProteinModelPortal:Q5TGS1 SMR:Q5TGS1
            STRING:Q5TGS1 DMDM:74746514 PRIDE:Q5TGS1 Ensembl:ENST00000377898
            GeneID:390992 KEGG:hsa:390992 UCSC:uc009vly.2 CTD:390992
            GeneCards:GC01P006304 HGNC:HGNC:26226 HPA:HPA047927 MIM:609971
            neXtProt:NX_Q5TGS1 PharmGKB:PA142671692 eggNOG:NOG272757
            HOVERGEN:HBG005959 InParanoid:Q5TGS1 KO:K09088 OMA:QGLWPVP
            OrthoDB:EOG4PVP15 GenomeRNAi:390992 NextBio:104203 CleanEx:HS_HES3
            Genevestigator:Q5TGS1 Uniprot:Q5TGS1
        Length = 186

 Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
 Identities = 37/84 (44%), Positives = 51/84 (60%)

Query:    18 LERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRRQQSL-GLT 76
             +E+KRRARIN  L++LK ++      +     KLEKADILEL+V+++  L  Q SL GL 
Sbjct:     1 MEKKRRARINVSLEQLKSLLEKHYSHQIRK-RKLEKADILELSVKYMRSL--QNSLQGLW 57

Query:    77 PEAAYADRFKAGFTHCAAEVSQYL 100
             P    A++  +GF  C   VSQ L
Sbjct:    58 PVPRGAEQ-PSGFRSCLPGVSQLL 80


>MGI|MGI:1930704 [details] [associations]
            symbol:Bhlhe41 "basic helix-loop-helix family, member e41"
            species:10090 "Mus musculus" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter"
            evidence=ISO;IDA;TAS] [GO:0000978 "RNA polymerase II core promoter
            proximal region sequence-specific DNA binding" evidence=IDA]
            [GO:0000981 "sequence-specific DNA binding RNA polymerase II
            transcription factor activity" evidence=IDA] [GO:0001078 "RNA
            polymerase II core promoter proximal region sequence-specific DNA
            binding transcription factor activity involved in negative
            regulation of transcription" evidence=IDA] [GO:0001102 "RNA
            polymerase II activating transcription factor binding"
            evidence=IDA;IPI] [GO:0001191 "RNA polymerase II transcription
            factor binding transcription factor activity involved in negative
            regulation of transcription" evidence=IDA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IDA] [GO:0003714 "transcription corepressor
            activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0009649 "entrainment of circadian clock"
            evidence=ISO] [GO:0010832 "negative regulation of myotube
            differentiation" evidence=IDA] [GO:0010944 "negative regulation of
            transcription by competitive promoter binding" evidence=IDA]
            [GO:0017053 "transcriptional repressor complex" evidence=TAS]
            [GO:0032922 "circadian regulation of gene expression" evidence=IMP]
            [GO:0042803 "protein homodimerization activity" evidence=IPI]
            [GO:0042826 "histone deacetylase binding" evidence=IDA] [GO:0043425
            "bHLH transcription factor binding" evidence=ISO;IDA;IPI]
            [GO:0043426 "MRF binding" evidence=IDA] [GO:0046982 "protein
            heterodimerization activity" evidence=ISO;IDA;IPI] [GO:0046983
            "protein dimerization activity" evidence=IEA] [GO:0070888 "E-box
            binding" evidence=ISO;IDA] [GO:0071820 "N-box binding"
            evidence=IDA] InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010
            Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353
            MGI:MGI:1930704 GO:GO:0017053 GO:GO:0003714 GO:GO:0001078
            GO:GO:0003705 GO:GO:0000978 GO:GO:0046982 GO:GO:0032922
            Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0042826 GO:GO:0010944
            GO:GO:0070888 GeneTree:ENSGT00510000046898 HOGENOM:HOG000234381
            GO:GO:0001191 InterPro:IPR018352 SMART:SM00511 GO:GO:0043426
            GO:GO:0001102 Reactome:REACT_109335 Reactome:REACT_24972 CTD:79365
            eggNOG:NOG235394 KO:K03730 OMA:AYKLPHR OrthoDB:EOG4V6ZHP
            ChiTaRS:BHLHE41 GO:GO:0010832 EMBL:AB044090 IPI:IPI00121602
            PIR:JC7584 RefSeq:NP_077789.1 UniGene:Mm.154529
            ProteinModelPortal:Q99PV5 SMR:Q99PV5 DIP:DIP-57696N
            MINT:MINT-7012655 STRING:Q99PV5 PhosphoSite:Q99PV5 PRIDE:Q99PV5
            Ensembl:ENSMUST00000032386 GeneID:79362 KEGG:mmu:79362
            InParanoid:Q99PV5 NextBio:349911 Bgee:Q99PV5 Genevestigator:Q99PV5
            GermOnline:ENSMUSG00000030256 Uniprot:Q99PV5
        Length = 410

 Score = 139 (54.0 bits), Expect = 9.1e-09, P = 9.1e-09
 Identities = 38/99 (38%), Positives = 56/99 (56%)

Query:    17 MLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKL------RRQ 70
             ++E+KRR RIN C+ +LK+++   L+     +  LEKA +LELT++HL  L      + Q
Sbjct:    51 LIEKKRRDRINECIAQLKDLLPEHLKLT--TLGHLEKAVVLELTLKHLKALTALTEQQHQ 108

Query:    71 QSLGL--------TPEAAYADRFKAGFTHCAAEVSQYLA 101
             + + L        +P  A  D F +GF  CA EV QYLA
Sbjct:   109 KIIALQNGERSLKSPVQADLDAFHSGFQTCAKEVLQYLA 147


>RGD|70900 [details] [associations]
            symbol:Bhlhe41 "basic helix-loop-helix family, member e41"
           species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
           of transcription from RNA polymerase II promoter" evidence=ISO]
           [GO:0000978 "RNA polymerase II core promoter proximal region
           sequence-specific DNA binding" evidence=ISO] [GO:0000981
           "sequence-specific DNA binding RNA polymerase II transcription
           factor activity" evidence=ISO] [GO:0001078 "RNA polymerase II core
           promoter proximal region sequence-specific DNA binding transcription
           factor activity involved in negative regulation of transcription"
           evidence=ISO] [GO:0001102 "RNA polymerase II activating
           transcription factor binding" evidence=ISO] [GO:0001191 "RNA
           polymerase II transcription factor binding transcription factor
           activity involved in negative regulation of transcription"
           evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003705
           "RNA polymerase II distal enhancer sequence-specific DNA binding
           transcription factor activity" evidence=ISO] [GO:0005634 "nucleus"
           evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
           evidence=IEA] [GO:0006355 "regulation of transcription,
           DNA-dependent" evidence=IEA] [GO:0007399 "nervous system
           development" evidence=NAS] [GO:0009649 "entrainment of circadian
           clock" evidence=IDA] [GO:0010832 "negative regulation of myotube
           differentiation" evidence=ISO] [GO:0010944 "negative regulation of
           transcription by competitive promoter binding" evidence=ISO]
           [GO:0032922 "circadian regulation of gene expression" evidence=ISO]
           [GO:0042803 "protein homodimerization activity" evidence=ISO]
           [GO:0042826 "histone deacetylase binding" evidence=ISO] [GO:0043425
           "bHLH transcription factor binding" evidence=ISO] [GO:0043426 "MRF
           binding" evidence=ISO] [GO:0046982 "protein heterodimerization
           activity" evidence=ISO] [GO:0046983 "protein dimerization activity"
           evidence=IEA] [GO:0048168 "regulation of neuronal synaptic
           plasticity" evidence=IEP;NAS] [GO:0070888 "E-box binding"
           evidence=ISO] [GO:0071820 "N-box binding" evidence=ISO]
           InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
           PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 RGD:70900
           GO:GO:0005634 GO:GO:0007399 GO:GO:0006355 GO:GO:0003677
           GO:GO:0009649 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
           GO:GO:0048168 InterPro:IPR018352 SMART:SM00511 EMBL:AF009329
           IPI:IPI00212381 UniGene:Rn.10784 ProteinModelPortal:O35779
           PhosphoSite:O35779 PRIDE:O35779 Genevestigator:O35779 Uniprot:O35779
        Length = 410

 Score = 139 (54.0 bits), Expect = 9.1e-09, P = 9.1e-09
 Identities = 38/99 (38%), Positives = 56/99 (56%)

Query:    17 MLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKL------RRQ 70
             ++E+KRR RIN C+ +LK+++   L+     +  LEKA +LELT++HL  L      + Q
Sbjct:    51 LIEKKRRDRINECIAQLKDLLPEHLKLT--TLGHLEKAVVLELTLKHLKALTALTEQQHQ 108

Query:    71 QSLGL--------TPEAAYADRFKAGFTHCAAEVSQYLA 101
             + + L        +P  A  D F +GF  CA EV QYLA
Sbjct:   109 KIIALQNGERSLKSPVQADLDAFHSGFQTCAKEVLQYLA 147


>UNIPROTKB|E1BVE8 [details] [associations]
            symbol:LOC419390 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
            "protein dimerization activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] InterPro:IPR003650 InterPro:IPR011598
            Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054
            SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
            GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GeneTree:ENSGT00700000104168 EMBL:AADN02040879 IPI:IPI00597628
            RefSeq:XP_417552.2 UniGene:Gga.9574 PRIDE:E1BVE8
            Ensembl:ENSGALT00000001708 GeneID:419390 KEGG:gga:419390
            OMA:QEAFHFL NextBio:20822452 ArrayExpress:E1BVE8 Uniprot:E1BVE8
        Length = 161

 Score = 131 (51.2 bits), Expect = 9.7e-09, P = 9.7e-09
 Identities = 31/91 (34%), Positives = 51/91 (56%)

Query:    12 EVMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRR-Q 70
             ++ KP++E+ RR RIN  +++LK ++    Q    N SKLEKADILE+ V +L +    Q
Sbjct:    21 KLRKPVVEKMRRDRINSSIEQLKLLLEKEFQRHQPN-SKLEKADILEMAVSYLKQQSHLQ 79

Query:    71 QSLGLTPEAAYADRFKAGFTHCAAEVSQYLA 101
                  +   +Y   F+ G++ C  E   +L+
Sbjct:    80 MKTSGSFHKSYQFDFREGYSRCLQEAFHFLS 110


>UNIPROTKB|Q28HA8 [details] [associations]
            symbol:hes7.1 "Transcription factor HES-7.1" species:8364
            "Xenopus (Silurana) tropicalis" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISS] [GO:0030917 "midbrain-hindbrain
            boundary development" evidence=ISS] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=ISS]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 GO:GO:0005634
            GO:GO:0003677 GO:GO:0006351 GO:GO:0000122 Gene3D:4.10.280.10
            SUPFAM:SSF47459 GO:GO:0030917 GO:GO:0001757
            GeneTree:ENSGT00700000104130 CTD:398267 HOGENOM:HOG000236346
            EMBL:CR760960 RefSeq:NP_001039166.1 UniGene:Str.1458
            ProteinModelPortal:Q28HA8 Ensembl:ENSXETT00000019915 GeneID:733997
            KEGG:xtr:733997 Xenbase:XB-GENE-876465 eggNOG:NOG326523 OMA:EILECTV
            OrthoDB:EOG49CQ9D Bgee:Q28HA8 Uniprot:Q28HA8
        Length = 178

 Score = 130 (50.8 bits), Expect = 1.2e-08, P = 1.2e-08
 Identities = 32/93 (34%), Positives = 54/93 (58%)

Query:    12 EVMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRRQQ 71
             +++KP++ER+RR RIN  L++L+  +  +L++E     K+EKA+ILE TV+ L      Q
Sbjct:    15 KLLKPLVERRRRERINNSLEKLRIFLSQALKSEKLKNPKVEKAEILECTVQFL------Q 68

Query:    72 SLGLTPEAAYADR--FKAGFTHCAAEVSQYLAS 102
             S  L P+        +++GF HC      ++ S
Sbjct:    69 SSKLVPQDGDVGNKGYQSGFQHCLETALHFMNS 101


>MGI|MGI:3040955 [details] [associations]
            symbol:Helt "helt bHLH transcription factor" species:10090
            "Mus musculus" [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IDA] [GO:0001967
            "suckling behavior" evidence=IMP] [GO:0003677 "DNA binding"
            evidence=IDA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IDA] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005667 "transcription factor complex" evidence=IDA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0007275 "multicellular organismal development"
            evidence=IEA] [GO:0007399 "nervous system development"
            evidence=IEA] [GO:0007417 "central nervous system development"
            evidence=IMP] [GO:0009791 "post-embryonic development"
            evidence=IMP] [GO:0010259 "multicellular organismal aging"
            evidence=IMP] [GO:0010467 "gene expression" evidence=IMP]
            [GO:0021858 "GABAergic neuron differentiation in basal ganglia"
            evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
            [GO:0030182 "neuron differentiation" evidence=IGI] [GO:0035264
            "multicellular organism growth" evidence=IMP] [GO:0042803 "protein
            homodimerization activity" evidence=IDA] [GO:0046983 "protein
            dimerization activity" evidence=IEA] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 MGI:MGI:3040955 GO:GO:0010467
            GO:GO:0042803 GO:GO:0003677 GO:GO:0001967 GO:GO:0007417
            GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0000122
            GO:GO:0009791 GO:GO:0035264 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GO:GO:0010259 GeneTree:ENSGT00700000104168 CTD:391723
            eggNOG:NOG330980 HOGENOM:HOG000082510 HOVERGEN:HBG054492
            OMA:PVSHKVI OrthoDB:EOG46144W GO:GO:0021858 EMBL:AB120968
            EMBL:AB098077 EMBL:DQ294234 EMBL:BC103599 EMBL:BC103600
            EMBL:BC103601 IPI:IPI00330943 RefSeq:NP_776150.2 UniGene:Mm.145631
            ProteinModelPortal:Q7TS99 SMR:Q7TS99 STRING:Q7TS99
            PhosphoSite:Q7TS99 PRIDE:Q7TS99 Ensembl:ENSMUST00000058636
            GeneID:234219 KEGG:mmu:234219 UCSC:uc009lqb.1 InParanoid:Q7TS99
            NextBio:382069 Bgee:Q7TS99 Genevestigator:Q7TS99 Uniprot:Q7TS99
        Length = 240

 Score = 132 (51.5 bits), Expect = 1.4e-08, P = 1.4e-08
 Identities = 34/93 (36%), Positives = 52/93 (55%)

Query:    13 VMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRRQQ- 71
             V   ++E++RR RINRCL+EL + +  +L  +     KLEKA+ILE+TV++L  L     
Sbjct:    13 VSHKVIEKRRRDRINRCLNELGKTVPMALAKQSSG--KLEKAEILEMTVQYLRALHSADF 70

Query:    72 SLGLTPE--AAYADRFKAGFTHCAAEVSQYLAS 102
               G   E  A +A+ F  G+  C   +  YL +
Sbjct:    71 PRGREKELLAEFANYFHYGYHECMKNLVHYLTT 103


>RGD|1564073 [details] [associations]
            symbol:Helt "helt bHLH transcription factor" species:10116
            "Rattus norvegicus" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA;ISO]
            [GO:0001967 "suckling behavior" evidence=IEA;ISO] [GO:0003677 "DNA
            binding" evidence=IEA;ISO] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA;ISO]
            [GO:0005634 "nucleus" evidence=ISO] [GO:0005667 "transcription
            factor complex" evidence=IEA;ISO] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0007417 "central nervous system
            development" evidence=IEA;ISO] [GO:0009791 "post-embryonic
            development" evidence=IEA;ISO] [GO:0010259 "multicellular
            organismal aging" evidence=IEA;ISO] [GO:0010467 "gene expression"
            evidence=ISO] [GO:0021858 "GABAergic neuron differentiation in
            basal ganglia" evidence=IEA;ISO] [GO:0030182 "neuron
            differentiation" evidence=ISO] [GO:0035264 "multicellular organism
            growth" evidence=IEA;ISO] [GO:0042803 "protein homodimerization
            activity" evidence=IEA;ISO] InterPro:IPR003650 InterPro:IPR011598
            Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054
            SMART:SM00353 RGD:1564073 GO:GO:0003677 GO:GO:0001967 GO:GO:0007417
            GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0000122
            GO:GO:0009791 GO:GO:0035264 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GO:GO:0010259 GeneTree:ENSGT00700000104168 OMA:PVSHKVI
            OrthoDB:EOG46144W GO:GO:0021858 IPI:IPI00209585
            RefSeq:XP_003751648.1 RefSeq:XP_003752951.1
            Ensembl:ENSRNOT00000014360 GeneID:498633 KEGG:rno:498633 CTD:498633
            Uniprot:D4ADJ5
        Length = 240

 Score = 132 (51.5 bits), Expect = 1.4e-08, P = 1.4e-08
 Identities = 34/93 (36%), Positives = 52/93 (55%)

Query:    13 VMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRRQQ- 71
             V   ++E++RR RINRCL+EL + +  +L  +     KLEKA+ILE+TV++L  L     
Sbjct:    13 VSHKVIEKRRRDRINRCLNELGKTVPMALAKQSSG--KLEKAEILEMTVQYLRALHSADF 70

Query:    72 SLGLTPE--AAYADRFKAGFTHCAAEVSQYLAS 102
               G   E  A +A+ F  G+  C   +  YL +
Sbjct:    71 PRGREKELLAEFANYFHYGYHECMKNLVHYLTT 103


>UNIPROTKB|J9P200 [details] [associations]
            symbol:HELT "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0046983 "protein dimerization activity" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 GO:GO:0005634 GO:GO:0006355
            GO:GO:0003677 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GeneTree:ENSGT00700000104168 OMA:PVSHKVI EMBL:AAEX03010501
            Ensembl:ENSCAFT00000043273 Uniprot:J9P200
        Length = 241

 Score = 132 (51.5 bits), Expect = 1.4e-08, P = 1.4e-08
 Identities = 34/93 (36%), Positives = 52/93 (55%)

Query:    13 VMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRRQQ- 71
             V   ++E++RR RINRCL+EL + +  +L  +     KLEKA+ILE+TV++L  L     
Sbjct:    13 VSHKVIEKRRRDRINRCLNELGKTVPMALAKQSSG--KLEKAEILEMTVQYLRALHSAHF 70

Query:    72 SLGLTPE--AAYADRFKAGFTHCAAEVSQYLAS 102
               G   E  A +A+ F  G+  C   +  YL +
Sbjct:    71 PRGREKELLAEFANYFHYGYHECMKNLVHYLTT 103


>UNIPROTKB|E1BVD7 [details] [associations]
            symbol:E1BVD7 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
            "protein dimerization activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] InterPro:IPR003650 InterPro:IPR011598
            Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054
            SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
            GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GeneTree:ENSGT00700000104168 EMBL:AADN02040879 IPI:IPI00577484
            Ensembl:ENSGALT00000001714 OMA:NSGYLRC Uniprot:E1BVD7
        Length = 146

 Score = 129 (50.5 bits), Expect = 1.6e-08, P = 1.6e-08
 Identities = 30/90 (33%), Positives = 50/90 (55%)

Query:    12 EVMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRRQQ 71
             ++ KP++E+ RR RIN  +++LK ++    Q    N SKLEKAD+LE+ V +L +  + Q
Sbjct:    12 KLRKPVVEKMRRDRINSSIEQLKLLLEKEFQRHQPN-SKLEKADVLEVAVSYLKQQSQLQ 70

Query:    72 SLGLTPEAAYADRFKAGFTHCAAEVSQYLA 101
                   +    D F +G+  C  E   +L+
Sbjct:    71 EPAFIHKNPEQD-FNSGYLRCLREAMHFLS 99


>UNIPROTKB|F1P0F5 [details] [associations]
            symbol:F1P0F5 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0046983 "protein dimerization activity"
            evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
            SMART:SM00353 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GeneTree:ENSGT00700000104168 EMBL:AADN02040879 IPI:IPI00819827
            Ensembl:ENSGALT00000040448 Uniprot:F1P0F5
        Length = 115

 Score = 129 (50.5 bits), Expect = 1.6e-08, P = 1.6e-08
 Identities = 30/90 (33%), Positives = 50/90 (55%)

Query:    12 EVMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRRQQ 71
             ++ KP++E+ RR RIN  +++LK ++    Q    N SKLEKAD+LE+ V +L +  + Q
Sbjct:    19 KLRKPVVEKMRRDRINSSIEQLKLLLEKEFQRHQPN-SKLEKADVLEVAVSYLKQQSQLQ 77

Query:    72 SLGLTPEAAYADRFKAGFTHCAAEVSQYLA 101
                   +    D F +G+  C  E   +L+
Sbjct:    78 EPAFIHKNPEQD-FNSGYLRCLREAMHFLS 106


>ZFIN|ZDB-GENE-980526-125 [details] [associations]
            symbol:her1 "hairy-related 1" species:7955 "Danio
            rerio" [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0046983 "protein dimerization activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0001756
            "somitogenesis" evidence=IGI;IEP;IMP] [GO:0001757 "somite
            specification" evidence=IGI;IMP] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=IDA;IPI] [GO:0005667 "transcription factor complex"
            evidence=IC] [GO:0046982 "protein heterodimerization activity"
            evidence=IPI] InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010
            Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353
            ZFIN:ZDB-GENE-980526-125 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
            GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF292032
            IPI:IPI00499744 UniGene:Dr.1462 ProteinModelPortal:Q9DF72
            STRING:Q9DF72 HOVERGEN:HBG098402 InParanoid:Q9DF72
            ArrayExpress:Q9DF72 Uniprot:Q9DF72
        Length = 328

 Score = 115 (45.5 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
 Identities = 24/53 (45%), Positives = 41/53 (77%)

Query:    13 VMKPMLERKRRARINRCLDELKEIMV-TSLQAEGENVSKLEKADILELTVRHL 64
             ++KP++E+KRR RIN+ L+EL+ +++  +L +  +N  KLEKA+ILEL V ++
Sbjct:    15 ILKPVIEKKRRDRINQRLEELRTLLLDNTLDSRLQN-PKLEKAEILELAVEYI 66

 Score = 39 (18.8 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
 Identities = 5/16 (31%), Positives = 11/16 (68%)

Query:    85 FKAGFTHCAAEVSQYL 100
             +KAGF  C + ++ ++
Sbjct:   118 YKAGFKECISRLASFI 133


>UNIPROTKB|F1NWS0 [details] [associations]
            symbol:F1NWS0 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            InterPro:IPR003650 Pfam:PF07527 PROSITE:PS51054 GO:GO:0006355
            GO:GO:0003677 InterPro:IPR018352 SMART:SM00511
            GeneTree:ENSGT00700000104168 EMBL:AADN02040837 EMBL:AADN02040838
            IPI:IPI01017247 Ensembl:ENSGALT00000040166 ArrayExpress:F1NWS0
            Uniprot:F1NWS0
        Length = 219

 Score = 129 (50.5 bits), Expect = 2.1e-08, P = 2.1e-08
 Identities = 25/55 (45%), Positives = 40/55 (72%)

Query:    49 SKLEKADILELTVRHLHKLRR-QQSLGLTPEAAYADRFKAGFTHCAAEVSQYLAS 102
             SKLEKADILE+TV+HL  L+R Q +  L+ + +   +++AGF  C  EV+++L++
Sbjct:     5 SKLEKADILEMTVKHLRNLQRAQMAAALSADPSVLGKYRAGFNECMNEVTRFLST 59


>UNIPROTKB|E1BMV2 [details] [associations]
            symbol:BHLHE41 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0046983
            "protein dimerization activity" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] InterPro:IPR003650 InterPro:IPR011598
            Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054
            SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
            GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GeneTree:ENSGT00510000046898 InterPro:IPR018352 SMART:SM00511
            EMBL:DAAA02014030 EMBL:DAAA02014031 IPI:IPI01028148
            UniGene:Bt.74188 Ensembl:ENSBTAT00000043182 Uniprot:E1BMV2
        Length = 374

 Score = 135 (52.6 bits), Expect = 2.1e-08, P = 2.1e-08
 Identities = 37/99 (37%), Positives = 56/99 (56%)

Query:    17 MLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKL------RRQ 70
             ++E+KRR RIN C+ +LK+++   L+     +  LEKA +LELT++HL  L      + Q
Sbjct:    51 LIEKKRRDRINECIAQLKDLLPEHLKLT--TLGHLEKAVVLELTLKHLKALTALTEQQHQ 108

Query:    71 QSLGL--------TPEAAYADRFKAGFTHCAAEVSQYLA 101
             + + L        +P  +  D F +GF  CA EV QYLA
Sbjct:   109 KIIALQNGERSLKSPIQSDLDAFHSGFQTCAKEVLQYLA 147


>UNIPROTKB|F1P2S5 [details] [associations]
            symbol:F1P2S5 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0001078 "RNA polymerase II core promoter
            proximal region sequence-specific DNA binding transcription factor
            activity involved in negative regulation of transcription"
            evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
            [GO:0003143 "embryonic heart tube morphogenesis" evidence=IEA]
            [GO:0003266 "regulation of secondary heart field cardioblast
            proliferation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006461 "protein complex
            assembly" evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA]
            [GO:0007219 "Notch signaling pathway" evidence=IEA] [GO:0007224
            "smoothened signaling pathway" evidence=IEA] [GO:0007262 "STAT
            protein import into nucleus" evidence=IEA] [GO:0016477 "cell
            migration" evidence=IEA] [GO:0021537 "telencephalon development"
            evidence=IEA] [GO:0021555 "midbrain-hindbrain boundary
            morphogenesis" evidence=IEA] [GO:0021557 "oculomotor nerve
            development" evidence=IEA] [GO:0021558 "trochlear nerve
            development" evidence=IEA] [GO:0021575 "hindbrain morphogenesis"
            evidence=IEA] [GO:0021984 "adenohypophysis development"
            evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
            [GO:0030513 "positive regulation of BMP signaling pathway"
            evidence=IEA] [GO:0030901 "midbrain development" evidence=IEA]
            [GO:0031016 "pancreas development" evidence=IEA] [GO:0035019
            "somatic stem cell maintenance" evidence=IEA] [GO:0035910
            "ascending aorta morphogenesis" evidence=IEA] [GO:0042102 "positive
            regulation of T cell proliferation" evidence=IEA] [GO:0042517
            "positive regulation of tyrosine phosphorylation of Stat3 protein"
            evidence=IEA] [GO:0042668 "auditory receptor cell fate
            determination" evidence=IEA] [GO:0042803 "protein homodimerization
            activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
            evidence=IEA] [GO:0043388 "positive regulation of DNA binding"
            evidence=IEA] [GO:0045598 "regulation of fat cell differentiation"
            evidence=IEA] [GO:0045608 "negative regulation of auditory receptor
            cell differentiation" evidence=IEA] [GO:0045747 "positive
            regulation of Notch signaling pathway" evidence=IEA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0045977 "positive regulation of mitotic
            cell cycle, embryonic" evidence=IEA] [GO:0046331 "lateral
            inhibition" evidence=IEA] [GO:0048469 "cell maturation"
            evidence=IEA] [GO:0048538 "thymus development" evidence=IEA]
            [GO:0048667 "cell morphogenesis involved in neuron differentiation"
            evidence=IEA] [GO:0048711 "positive regulation of astrocyte
            differentiation" evidence=IEA] [GO:0048715 "negative regulation of
            oligodendrocyte differentiation" evidence=IEA] [GO:0060037
            "pharyngeal system development" evidence=IEA] [GO:0060164
            "regulation of timing of neuron differentiation" evidence=IEA]
            [GO:0060253 "negative regulation of glial cell proliferation"
            evidence=IEA] [GO:0060412 "ventricular septum morphogenesis"
            evidence=IEA] [GO:0060675 "ureteric bud morphogenesis"
            evidence=IEA] [GO:0060716 "labyrinthine layer blood vessel
            development" evidence=IEA] [GO:0061009 "common bile duct
            development" evidence=IEA] [GO:0061106 "negative regulation of
            stomach neuroendocrine cell differentiation" evidence=IEA]
            [GO:0061309 "cardiac neural crest cell development involved in
            outflow tract morphogenesis" evidence=IEA] [GO:0071820 "N-box
            binding" evidence=IEA] [GO:0072012 "glomerulus vasculature
            development" evidence=IEA] [GO:0072049 "comma-shaped body
            morphogenesis" evidence=IEA] [GO:0072050 "S-shaped body
            morphogenesis" evidence=IEA] [GO:0072141 "renal interstitial cell
            development" evidence=IEA] [GO:0072282 "metanephric nephron tubule
            morphogenesis" evidence=IEA] [GO:0090102 "cochlea development"
            evidence=IEA] [GO:0097084 "vascular smooth muscle cell development"
            evidence=IEA] [GO:0097150 "neuronal stem cell maintenance"
            evidence=IEA] [GO:2000227 "negative regulation of pancreatic A cell
            differentiation" evidence=IEA] [GO:2000737 "negative regulation of
            stem cell differentiation" evidence=IEA] [GO:2000974 "negative
            regulation of pro-B cell differentiation" evidence=IEA]
            InterPro:IPR003650 Pfam:PF07527 PROSITE:PS51054 GO:GO:0005634
            GO:GO:0005737 GO:GO:0016477 GO:GO:0006461 GO:GO:0001078
            GO:GO:0045944 GO:GO:0007155 GO:GO:0045747 GO:GO:0030513
            GO:GO:0042102 GO:GO:0046331 GO:GO:0045598 GO:GO:0007224
            GO:GO:0042517 InterPro:IPR018352 SMART:SM00511 GO:GO:0043388
            GO:GO:0003266 GO:GO:0007262 GO:GO:0048505
            GeneTree:ENSGT00700000104168 GO:GO:0071820 GO:GO:2000227
            GO:GO:0061106 EMBL:AADN02040837 EMBL:AADN02040838 IPI:IPI00602379
            Ensembl:ENSGALT00000003195 ArrayExpress:F1P2S5 Uniprot:F1P2S5
        Length = 221

 Score = 129 (50.5 bits), Expect = 2.2e-08, P = 2.2e-08
 Identities = 25/55 (45%), Positives = 40/55 (72%)

Query:    49 SKLEKADILELTVRHLHKLRR-QQSLGLTPEAAYADRFKAGFTHCAAEVSQYLAS 102
             SKLEKADILE+TV+HL  L+R Q +  L+ + +   +++AGF  C  EV+++L++
Sbjct:     5 SKLEKADILEMTVKHLRNLQRAQMAAALSADPSVLGKYRAGFNECMNEVTRFLST 59


>UNIPROTKB|G3MYL5 [details] [associations]
            symbol:BHLHE41 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0070888 "E-box binding" evidence=IEA] [GO:0046982
            "protein heterodimerization activity" evidence=IEA] [GO:0043426
            "MRF binding" evidence=IEA] [GO:0042826 "histone deacetylase
            binding" evidence=IEA] [GO:0042803 "protein homodimerization
            activity" evidence=IEA] [GO:0032922 "circadian regulation of gene
            expression" evidence=IEA] [GO:0010944 "negative regulation of
            transcription by competitive promoter binding" evidence=IEA]
            [GO:0010832 "negative regulation of myotube differentiation"
            evidence=IEA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
            binding transcription factor activity involved in negative
            regulation of transcription" evidence=IEA] [GO:0001102 "RNA
            polymerase II activating transcription factor binding"
            evidence=IEA] [GO:0001078 "RNA polymerase II core promoter proximal
            region sequence-specific DNA binding transcription factor activity
            involved in negative regulation of transcription" evidence=IEA]
            [GO:0000978 "RNA polymerase II core promoter proximal region
            sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010
            Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353
            GO:GO:0005634 GO:GO:0001078 GO:GO:0003705 GO:GO:0000978
            GO:GO:0000122 GO:GO:0032922 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GO:GO:0010944 GeneTree:ENSGT00510000046898 GO:GO:0001191
            InterPro:IPR018352 SMART:SM00511 GO:GO:0010832 EMBL:DAAA02014030
            EMBL:DAAA02014031 Ensembl:ENSBTAT00000063451 OMA:HTHGRTH
            Uniprot:G3MYL5
        Length = 467

 Score = 135 (52.6 bits), Expect = 3.1e-08, P = 3.1e-08
 Identities = 37/99 (37%), Positives = 56/99 (56%)

Query:    17 MLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKL------RRQ 70
             ++E+KRR RIN C+ +LK+++   L+     +  LEKA +LELT++HL  L      + Q
Sbjct:    51 LIEKKRRDRINECIAQLKDLLPEHLKLT--TLGHLEKAVVLELTLKHLKALTALTEQQHQ 108

Query:    71 QSLGL--------TPEAAYADRFKAGFTHCAAEVSQYLA 101
             + + L        +P  +  D F +GF  CA EV QYLA
Sbjct:   109 KIIALQNGERSLKSPIQSDLDAFHSGFQTCAKEVLQYLA 147


>UNIPROTKB|F1NWR8 [details] [associations]
            symbol:F1NWR8 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0001078 "RNA polymerase II core promoter
            proximal region sequence-specific DNA binding transcription factor
            activity involved in negative regulation of transcription"
            evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
            [GO:0003143 "embryonic heart tube morphogenesis" evidence=IEA]
            [GO:0003266 "regulation of secondary heart field cardioblast
            proliferation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006461 "protein complex
            assembly" evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA]
            [GO:0007219 "Notch signaling pathway" evidence=IEA] [GO:0007224
            "smoothened signaling pathway" evidence=IEA] [GO:0007262 "STAT
            protein import into nucleus" evidence=IEA] [GO:0016477 "cell
            migration" evidence=IEA] [GO:0021537 "telencephalon development"
            evidence=IEA] [GO:0021555 "midbrain-hindbrain boundary
            morphogenesis" evidence=IEA] [GO:0021557 "oculomotor nerve
            development" evidence=IEA] [GO:0021558 "trochlear nerve
            development" evidence=IEA] [GO:0021575 "hindbrain morphogenesis"
            evidence=IEA] [GO:0021984 "adenohypophysis development"
            evidence=IEA] [GO:0030324 "lung development" evidence=IEA]
            [GO:0030513 "positive regulation of BMP signaling pathway"
            evidence=IEA] [GO:0030901 "midbrain development" evidence=IEA]
            [GO:0031016 "pancreas development" evidence=IEA] [GO:0035019
            "somatic stem cell maintenance" evidence=IEA] [GO:0035910
            "ascending aorta morphogenesis" evidence=IEA] [GO:0042102 "positive
            regulation of T cell proliferation" evidence=IEA] [GO:0042517
            "positive regulation of tyrosine phosphorylation of Stat3 protein"
            evidence=IEA] [GO:0042668 "auditory receptor cell fate
            determination" evidence=IEA] [GO:0042803 "protein homodimerization
            activity" evidence=IEA] [GO:0042826 "histone deacetylase binding"
            evidence=IEA] [GO:0043388 "positive regulation of DNA binding"
            evidence=IEA] [GO:0045598 "regulation of fat cell differentiation"
            evidence=IEA] [GO:0045608 "negative regulation of auditory receptor
            cell differentiation" evidence=IEA] [GO:0045747 "positive
            regulation of Notch signaling pathway" evidence=IEA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0045977 "positive regulation of mitotic
            cell cycle, embryonic" evidence=IEA] [GO:0046331 "lateral
            inhibition" evidence=IEA] [GO:0048469 "cell maturation"
            evidence=IEA] [GO:0048538 "thymus development" evidence=IEA]
            [GO:0048667 "cell morphogenesis involved in neuron differentiation"
            evidence=IEA] [GO:0048711 "positive regulation of astrocyte
            differentiation" evidence=IEA] [GO:0048715 "negative regulation of
            oligodendrocyte differentiation" evidence=IEA] [GO:0060037
            "pharyngeal system development" evidence=IEA] [GO:0060164
            "regulation of timing of neuron differentiation" evidence=IEA]
            [GO:0060253 "negative regulation of glial cell proliferation"
            evidence=IEA] [GO:0060412 "ventricular septum morphogenesis"
            evidence=IEA] [GO:0060675 "ureteric bud morphogenesis"
            evidence=IEA] [GO:0060716 "labyrinthine layer blood vessel
            development" evidence=IEA] [GO:0061009 "common bile duct
            development" evidence=IEA] [GO:0061106 "negative regulation of
            stomach neuroendocrine cell differentiation" evidence=IEA]
            [GO:0061309 "cardiac neural crest cell development involved in
            outflow tract morphogenesis" evidence=IEA] [GO:0071820 "N-box
            binding" evidence=IEA] [GO:0072012 "glomerulus vasculature
            development" evidence=IEA] [GO:0072049 "comma-shaped body
            morphogenesis" evidence=IEA] [GO:0072050 "S-shaped body
            morphogenesis" evidence=IEA] [GO:0072141 "renal interstitial cell
            development" evidence=IEA] [GO:0072282 "metanephric nephron tubule
            morphogenesis" evidence=IEA] [GO:0090102 "cochlea development"
            evidence=IEA] [GO:0097084 "vascular smooth muscle cell development"
            evidence=IEA] [GO:0097150 "neuronal stem cell maintenance"
            evidence=IEA] [GO:2000227 "negative regulation of pancreatic A cell
            differentiation" evidence=IEA] [GO:2000737 "negative regulation of
            stem cell differentiation" evidence=IEA] [GO:2000974 "negative
            regulation of pro-B cell differentiation" evidence=IEA]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF07527 PROSITE:PS51054
            SMART:SM00353 GO:GO:0005634 GO:GO:0005737 GO:GO:0016477
            GO:GO:0006461 GO:GO:0001078 GO:GO:0045944 GO:GO:0007155
            GO:GO:0045747 GO:GO:0030513 GO:GO:0042102 GO:GO:0046331
            Gene3D:4.10.280.10 GO:GO:0045598 GO:GO:0007224 GO:GO:0042517
            InterPro:IPR018352 SMART:SM00511 GO:GO:0043388 GO:GO:0003266
            GO:GO:0007262 GO:GO:0048505 GeneTree:ENSGT00700000104168
            GO:GO:0071820 GO:GO:2000227 GO:GO:0061106 EMBL:AADN02040837
            EMBL:AADN02040838 IPI:IPI00823163 Ensembl:ENSGALT00000040170
            OMA:HTPDKPK ArrayExpress:F1NWR8 Uniprot:F1NWR8
        Length = 264

 Score = 130 (50.8 bits), Expect = 3.2e-08, P = 3.2e-08
 Identities = 31/85 (36%), Positives = 52/85 (61%)

Query:    19 ERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRR-QQSLGLTP 77
             E+K++    R  +E K     S + +    SKLEKADILE+TV+HL  L+R Q +  L+ 
Sbjct:    23 EKKKKEGEKRRREEEK-----SKKNKSSRHSKLEKADILEMTVKHLRNLQRAQMAAALSA 77

Query:    78 EAAYADRFKAGFTHCAAEVSQYLAS 102
             + +   +++AGF  C  EV+++L++
Sbjct:    78 DPSVLGKYRAGFNECMNEVTRFLST 102


>UNIPROTKB|I3L7P9 [details] [associations]
            symbol:BHLHE41 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0070888 "E-box binding" evidence=IEA] [GO:0046982
            "protein heterodimerization activity" evidence=IEA] [GO:0043426
            "MRF binding" evidence=IEA] [GO:0042826 "histone deacetylase
            binding" evidence=IEA] [GO:0042803 "protein homodimerization
            activity" evidence=IEA] [GO:0032922 "circadian regulation of gene
            expression" evidence=IEA] [GO:0010944 "negative regulation of
            transcription by competitive promoter binding" evidence=IEA]
            [GO:0010832 "negative regulation of myotube differentiation"
            evidence=IEA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0001191 "RNA polymerase II transcription factor
            binding transcription factor activity involved in negative
            regulation of transcription" evidence=IEA] [GO:0001102 "RNA
            polymerase II activating transcription factor binding"
            evidence=IEA] [GO:0001078 "RNA polymerase II core promoter proximal
            region sequence-specific DNA binding transcription factor activity
            involved in negative regulation of transcription" evidence=IEA]
            [GO:0000978 "RNA polymerase II core promoter proximal region
            sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010
            Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353
            GO:GO:0005634 GO:GO:0001078 GO:GO:0003705 GO:GO:0000978
            GO:GO:0000122 GO:GO:0032922 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GO:GO:0010944 GeneTree:ENSGT00510000046898 GO:GO:0001191
            InterPro:IPR018352 SMART:SM00511 CTD:79365 KO:K03730 OMA:AYKLPHR
            GO:GO:0010832 EMBL:CU469482 RefSeq:XP_003355589.1
            Ensembl:ENSSSCT00000030248 GeneID:100626912 KEGG:ssc:100626912
            Uniprot:I3L7P9
        Length = 482

 Score = 135 (52.6 bits), Expect = 3.3e-08, P = 3.3e-08
 Identities = 37/99 (37%), Positives = 56/99 (56%)

Query:    17 MLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKL------RRQ 70
             ++E+KRR RIN C+ +LK+++   L+     +  LEKA +LELT++HL  L      + Q
Sbjct:    51 LIEKKRRDRINECIAQLKDLLPEHLKLT--TLGHLEKAVVLELTLKHLKALTALTEQQHQ 108

Query:    71 QSLGL--------TPEAAYADRFKAGFTHCAAEVSQYLA 101
             + + L        +P  +  D F +GF  CA EV QYLA
Sbjct:   109 KIIALQNGERSLKSPIQSDLDAFHSGFQTCAKEVLQYLA 147


>ZFIN|ZDB-GENE-040824-6 [details] [associations]
            symbol:helt "hey-like transcription factor"
            species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0046983 "protein dimerization activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 ZFIN:ZDB-GENE-040824-6 GO:GO:0005634
            GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 Gene3D:4.10.280.10
            SUPFAM:SSF47459 HSSP:P07270 GeneTree:ENSGT00700000104168
            EMBL:AY549496 EMBL:BC092667 IPI:IPI00483820 RefSeq:NP_996948.1
            UniGene:Dr.91513 ProteinModelPortal:Q6QB00
            Ensembl:ENSDART00000078889 GeneID:404275 KEGG:dre:404275 CTD:391723
            eggNOG:NOG330980 HOGENOM:HOG000082510 HOVERGEN:HBG054492
            InParanoid:Q6QB00 OMA:PVSHKVI OrthoDB:EOG46144W NextBio:20817636
            Bgee:Q6QB00 Uniprot:Q6QB00
        Length = 270

 Score = 129 (50.5 bits), Expect = 4.5e-08, P = 4.5e-08
 Identities = 36/96 (37%), Positives = 55/96 (57%)

Query:    13 VMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLR---- 68
             V   ++E++RR RINRCL+EL + +  +L  +  N  KLEKA+ILE+TV++L  L     
Sbjct:    62 VSHKVIEKRRRDRINRCLNELGKTVPMALAKQ--NSGKLEKAEILEMTVQYLRALHSADF 119

Query:    69 -RQQSLG-LTPEAAYADRFKAGFTHCAAEVSQYLAS 102
              R +  G L  E  +A+ F  G+  C   +  YL +
Sbjct:   120 PRGREKGELLTE--FANYFHYGYHECMKNLVHYLTT 153


>UNIPROTKB|E1BP66 [details] [associations]
            symbol:LOC527932 "Uncharacterized protein" species:9913
            "Bos taurus" [GO:0042803 "protein homodimerization activity"
            evidence=IEA] [GO:0035264 "multicellular organism growth"
            evidence=IEA] [GO:0021858 "GABAergic neuron differentiation in
            basal ganglia" evidence=IEA] [GO:0010259 "multicellular organismal
            aging" evidence=IEA] [GO:0009791 "post-embryonic development"
            evidence=IEA] [GO:0007417 "central nervous system development"
            evidence=IEA] [GO:0005667 "transcription factor complex"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0001967 "suckling behavior"
            evidence=IEA] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 GO:GO:0003677 GO:GO:0001967
            GO:GO:0007417 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
            GO:GO:0000122 GO:GO:0009791 GO:GO:0035264 Gene3D:4.10.280.10
            SUPFAM:SSF47459 GO:GO:0010259 GeneTree:ENSGT00700000104168
            OMA:PVSHKVI GO:GO:0021858 EMBL:DAAA02060186 IPI:IPI00706660
            RefSeq:XP_003584202.1 RefSeq:XP_003587998.1
            Ensembl:ENSBTAT00000019570 GeneID:527932 KEGG:bta:527932
            Uniprot:E1BP66
        Length = 242

 Score = 127 (49.8 bits), Expect = 5.3e-08, P = 5.3e-08
 Identities = 34/96 (35%), Positives = 54/96 (56%)

Query:    13 VMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKL----- 67
             V   ++E++RR RINRCL+EL + +  +L  +     KLEKA+ILE+TV++L  L     
Sbjct:    13 VSHKVIEKRRRDRINRCLNELGKTVPMALAKQSSG--KLEKAEILEMTVQYLRALHSADF 70

Query:    68 -RRQQSLGLTPEAAYADRFKAGFTHCAAEVSQYLAS 102
              R ++   L  E  +A+ F  G+  C   +  YL +
Sbjct:    71 PRGREKAELLAE--FANYFHYGYHECMKNLVHYLTT 104


>UNIPROTKB|B7ZMI7 [details] [associations]
            symbol:HELT "HELT protein" species:9606 "Homo sapiens"
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983 "protein
            dimerization activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] InterPro:IPR003650 InterPro:IPR011598
            Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054
            SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
            GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
            HOGENOM:HOG000082510 HOVERGEN:HBG054492 EMBL:AC093824
            UniGene:Hs.531242 HGNC:HGNC:33783 EMBL:BC144567 IPI:IPI00963904
            SMR:B7ZMI7 Ensembl:ENST00000515777 UCSC:uc011cko.2 Uniprot:B7ZMI7
        Length = 242

 Score = 127 (49.8 bits), Expect = 5.3e-08, P = 5.3e-08
 Identities = 34/96 (35%), Positives = 54/96 (56%)

Query:    13 VMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKL----- 67
             V   ++E++RR RINRCL+EL + +  +L  +     KLEKA+ILE+TV++L  L     
Sbjct:    13 VSHKVIEKRRRDRINRCLNELGKTVPMALAKQSSG--KLEKAEILEMTVQYLRALHSADF 70

Query:    68 -RRQQSLGLTPEAAYADRFKAGFTHCAAEVSQYLAS 102
              R ++   L  E  +A+ F  G+  C   +  YL +
Sbjct:    71 PRGREKAELLAE--FANYFHYGYHECMKNLVHYLTT 104


>UNIPROTKB|Q9C0J9 [details] [associations]
            symbol:BHLHE41 "Class E basic helix-loop-helix protein 41"
            species:9606 "Homo sapiens" [GO:0032922 "circadian regulation of
            gene expression" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=NAS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=NAS]
            [GO:0005634 "nucleus" evidence=NAS] [GO:0009887 "organ
            morphogenesis" evidence=NAS] [GO:0008283 "cell proliferation"
            evidence=NAS] [GO:0030154 "cell differentiation" evidence=NAS]
            [GO:0070888 "E-box binding" evidence=ISS;IDA] [GO:0046982 "protein
            heterodimerization activity" evidence=ISS;IPI] [GO:0043425 "bHLH
            transcription factor binding" evidence=ISS;IPI] [GO:0000122
            "negative regulation of transcription from RNA polymerase II
            promoter" evidence=IDA] [GO:0001078 "RNA polymerase II core
            promoter proximal region sequence-specific DNA binding
            transcription factor activity involved in negative regulation of
            transcription" evidence=ISS] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=ISS] [GO:0010832 "negative regulation of myotube
            differentiation" evidence=ISS] [GO:0010944 "negative regulation of
            transcription by competitive promoter binding" evidence=ISS]
            [GO:0000978 "RNA polymerase II core promoter proximal region
            sequence-specific DNA binding" evidence=ISS] [GO:0001102 "RNA
            polymerase II activating transcription factor binding"
            evidence=ISS] [GO:0001191 "RNA polymerase II transcription factor
            binding transcription factor activity involved in negative
            regulation of transcription" evidence=ISS] [GO:0043426 "MRF
            binding" evidence=ISS] [GO:0042826 "histone deacetylase binding"
            evidence=ISS] [GO:0042803 "protein homodimerization activity"
            evidence=ISS] InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010
            Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353
            GO:GO:0005634 GO:GO:0042803 GO:GO:0030154 GO:GO:0008283
            Pathway_Interaction_DB:hif1_tfpathway GO:GO:0001078 GO:GO:0003705
            GO:GO:0000978 GO:GO:0009887 GO:GO:0046982 GO:GO:0032922
            EMBL:CH471094 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0042826
            GO:GO:0010944 GO:GO:0070888 HOGENOM:HOG000234381 GO:GO:0001191
            InterPro:IPR018352 SMART:SM00511 Reactome:REACT_24941 GO:GO:0043426
            GO:GO:0001102 EMBL:AB044088 EMBL:EF015896 IPI:IPI00006153
            PIR:JC7583 RefSeq:NP_110389.1 UniGene:Hs.177841
            ProteinModelPortal:Q9C0J9 SMR:Q9C0J9 DIP:DIP-59904N STRING:Q9C0J9
            PhosphoSite:Q9C0J9 DMDM:20137459 PRIDE:Q9C0J9
            Ensembl:ENST00000242728 GeneID:79365 KEGG:hsa:79365 UCSC:uc001rhb.3
            CTD:79365 GeneCards:GC12M026272 HGNC:HGNC:16617 MIM:606200
            MIM:612975 neXtProt:NX_Q9C0J9 PharmGKB:PA164716636 eggNOG:NOG235394
            HOVERGEN:HBG050685 InParanoid:Q9C0J9 KO:K03730 OMA:AYKLPHR
            OrthoDB:EOG4V6ZHP PhylomeDB:Q9C0J9 ChiTaRS:BHLHE41 GenomeRNAi:79365
            NextBio:68333 ArrayExpress:Q9C0J9 Bgee:Q9C0J9 Genevestigator:Q9C0J9
            GermOnline:ENSG00000123095 GO:GO:0010832 Uniprot:Q9C0J9
        Length = 482

 Score = 132 (51.5 bits), Expect = 6.9e-08, P = 6.9e-08
 Identities = 36/99 (36%), Positives = 56/99 (56%)

Query:    17 MLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKL------RRQ 70
             ++E+KRR RIN C+ +LK+++   L+     +  LEKA +LELT++HL  L      + Q
Sbjct:    51 LIEKKRRDRINECIAQLKDLLPEHLKLT--TLGHLEKAVVLELTLKHLKALTALTEQQHQ 108

Query:    71 QSLGL--------TPEAAYADRFKAGFTHCAAEVSQYLA 101
             + + L        +P  +  D F +GF  CA EV QYL+
Sbjct:   109 KIIALQNGERSLKSPIQSDLDAFHSGFQTCAKEVLQYLS 147


>ZFIN|ZDB-GENE-050419-146 [details] [associations]
            symbol:bhlhe41 "basic helix-loop-helix family,
            member e41" species:7955 "Danio rerio" [GO:0046983 "protein
            dimerization activity" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=IDA] InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010
            Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353
            ZFIN:ZDB-GENE-050419-146 GO:GO:0005634 GO:GO:0045892 GO:GO:0003677
            GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GeneTree:ENSGT00510000046898 HOGENOM:HOG000234381
            InterPro:IPR018352 SMART:SM00511 CTD:79365 eggNOG:NOG235394
            HOVERGEN:HBG050685 KO:K03730 OMA:AYKLPHR OrthoDB:EOG4V6ZHP
            EMBL:BX649507 EMBL:BC163162 EMBL:BC163191 EMBL:DQ779789
            EMBL:AB212760 EMBL:BX000347 IPI:IPI00481758 RefSeq:NP_001034196.1
            UniGene:Dr.85246 STRING:Q2PGD2 Ensembl:ENSDART00000061106
            GeneID:563771 KEGG:dre:563771 InParanoid:Q2PGD2 NextBio:20885063
            Uniprot:Q2PGD2
        Length = 421

 Score = 129 (50.5 bits), Expect = 1.2e-07, P = 1.2e-07
 Identities = 36/98 (36%), Positives = 55/98 (56%)

Query:    17 MLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKL------RRQ 70
             ++E+KRR RIN C+ +LK+++   L+     +  LEKA +LELT++HL+ L      + Q
Sbjct:    51 LIEKKRRDRINECIGQLKDLLPEHLKLT--TLGHLEKAVVLELTLKHLNALTAVTEQQHQ 108

Query:    71 QSLGL--------TPEAAYADRFKAGFTHCAAEVSQYL 100
             + + L        +   A  D F +GF  CA EV QYL
Sbjct:   109 KIIALQNGERSLKSSLQADLDAFHSGFQACAKEVLQYL 146


>ZFIN|ZDB-GENE-030828-5 [details] [associations]
            symbol:hes6 "hairy and enhancer of split 6
            (Drosophila)" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
            activity" evidence=IEA] [GO:0001756 "somitogenesis"
            evidence=IGI;IMP] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0017053
            "transcriptional repressor complex" evidence=IC] [GO:0046982
            "protein heterodimerization activity" evidence=IPI] [GO:0045892
            "negative regulation of transcription, DNA-dependent"
            evidence=IGI;IDA] InterPro:IPR003650 InterPro:IPR011598
            Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054
            SMART:SM00353 ZFIN:ZDB-GENE-030828-5 GO:GO:0017053 GO:GO:0045892
            GO:GO:0003677 GO:GO:0006351 GO:GO:0001756 Gene3D:4.10.280.10
            SUPFAM:SSF47459 HOVERGEN:HBG107098 EMBL:AB097830 IPI:IPI00503698
            UniGene:Dr.19467 ProteinModelPortal:Q7T2V8 STRING:Q7T2V8
            InParanoid:Q7T2V8 ArrayExpress:Q7T2V8 Uniprot:Q7T2V8
        Length = 226

 Score = 123 (48.4 bits), Expect = 1.2e-07, P = 1.2e-07
 Identities = 30/91 (32%), Positives = 55/91 (60%)

Query:    15 KPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKL---RRQQ 71
             KP++E+KRRARIN  L EL+ ++     A+ +   K E A++LE+TV+ +  +   + ++
Sbjct:    24 KPLVEKKRRARINESLQELRLLL-----ADPDAQVKXENAEVLEMTVKRVESILQNKAKE 78

Query:    72 SLGLTPEAAYADRFKAGFTHCAAEVSQYLAS 102
             +  +  EA   +RF AG+  C  +V  +++S
Sbjct:    79 ADSVNREAN--ERFAAGYIQCMHDVHTFVSS 107


>MGI|MGI:104877 [details] [associations]
            symbol:Hes3 "hairy and enhancer of split 3 (Drosophila)"
            species:10090 "Mus musculus" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IGI]
            [GO:0001701 "in utero embryonic development" evidence=IGI]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0008134 "transcription factor
            binding" evidence=NAS] [GO:0021555 "midbrain-hindbrain boundary
            morphogenesis" evidence=IGI] [GO:0021557 "oculomotor nerve
            development" evidence=IGI] [GO:0021558 "trochlear nerve
            development" evidence=IGI] [GO:0021575 "hindbrain morphogenesis"
            evidence=IGI] [GO:0021915 "neural tube development" evidence=IGI]
            [GO:0030901 "midbrain development" evidence=IGI] [GO:0045892
            "negative regulation of transcription, DNA-dependent" evidence=ISO]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IGI] [GO:0046983 "protein
            dimerization activity" evidence=IEA] [GO:0050767 "regulation of
            neurogenesis" evidence=IGI] [GO:0060164 "regulation of timing of
            neuron differentiation" evidence=IGI] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 PROSITE:PS51054
            SMART:SM00353 MGI:MGI:104877 GO:GO:0005634 GO:GO:0003677
            GO:GO:0001701 GO:GO:0045944 GO:GO:0006351 GO:GO:0000122
            GO:GO:0030901 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0008134
            GO:GO:0021575 GeneTree:ENSGT00700000104130 GO:GO:0021555
            HOGENOM:HOG000236346 GO:GO:0021557 GO:GO:0060164 GO:GO:0021558
            CTD:390992 eggNOG:NOG272757 HOVERGEN:HBG005959 KO:K09088
            OMA:QGLWPVP EMBL:D32200 EMBL:D85169 EMBL:AK090218 EMBL:BC116444
            IPI:IPI00751973 RefSeq:NP_032263.2 UniGene:Mm.3516
            ProteinModelPortal:Q61657 SMR:Q61657 STRING:Q61657 PRIDE:Q61657
            Ensembl:ENSMUST00000094438 GeneID:15207 KEGG:mmu:15207
            UCSC:uc008wac.1 InParanoid:Q61657 NextBio:287765 Bgee:Q61657
            CleanEx:MM_HES3 Genevestigator:Q61657 GermOnline:ENSMUSG00000028946
            Uniprot:Q61657
        Length = 175

 Score = 119 (46.9 bits), Expect = 1.8e-07, P = 1.8e-07
 Identities = 35/84 (41%), Positives = 50/84 (59%)

Query:    18 LERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRRQQSL-GLT 76
             +E+KRRARIN  L++L+ ++      +     KLEKADILEL+V+++  L  Q SL GL 
Sbjct:     1 MEKKRRARINVSLEQLRSLLERHYSHQIRK-RKLEKADILELSVKYMRSL--QNSLQGLW 57

Query:    77 PEAAYADRFKAGFTHCAAEVSQYL 100
             P  +  D + +GF      VSQ L
Sbjct:    58 PVPSGVD-YPSGFQGGLRGVSQRL 80


>UNIPROTKB|E2R0Q2 [details] [associations]
            symbol:HES3 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0060164 "regulation of timing of neuron
            differentiation" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0030901 "midbrain development" evidence=IEA] [GO:0021575
            "hindbrain morphogenesis" evidence=IEA] [GO:0021558 "trochlear
            nerve development" evidence=IEA] [GO:0021557 "oculomotor nerve
            development" evidence=IEA] [GO:0021555 "midbrain-hindbrain boundary
            morphogenesis" evidence=IEA] [GO:0001701 "in utero embryonic
            development" evidence=IEA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0046983 "protein dimerization activity" evidence=IEA]
            InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
            GO:GO:0001701 GO:GO:0045944 GO:GO:0000122 GO:GO:0030901
            Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0021575
            GeneTree:ENSGT00700000104130 GO:GO:0021555 GO:GO:0021557
            GO:GO:0060164 GO:GO:0021558 OMA:QGLWPVP EMBL:AAEX03003900
            Ensembl:ENSCAFT00000031110 Uniprot:E2R0Q2
        Length = 175

 Score = 118 (46.6 bits), Expect = 2.3e-07, P = 2.3e-07
 Identities = 33/83 (39%), Positives = 47/83 (56%)

Query:    18 LERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRRQQSLGLTP 77
             +E+KRRARIN  L++LK ++      +     KLEKADILEL+V+++  L+     GL P
Sbjct:     1 MEKKRRARINVSLEQLKSLLEKHYSHQIRK-RKLEKADILELSVKYMKSLQNSVQ-GLWP 58

Query:    78 EAAYADRFKAGFTHCAAEVSQYL 100
                  + F +GF      VSQ L
Sbjct:    59 VPGGVE-FPSGFRSGLPGVSQLL 80


>UNIPROTKB|J3KSH6 [details] [associations]
            symbol:HES7 "Transcription factor HES-7" species:9606 "Homo
            sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983
            "protein dimerization activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] InterPro:IPR003650 InterPro:IPR011598
            Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054
            SMART:SM00353 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
            GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC129492
            HGNC:HGNC:15977 Ensembl:ENST00000577735 Uniprot:J3KSH6
        Length = 145

 Score = 118 (46.6 bits), Expect = 2.3e-07, P = 2.3e-07
 Identities = 24/58 (41%), Positives = 40/58 (68%)

Query:    12 EVMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRR 69
             E++KP++E++RR RINR L+EL+ +++   + +     KLEKA+ILE  V +L +  R
Sbjct:     6 EMLKPLVEKRRRDRINRSLEELRLLLLERTRDQNLRNPKLEKAEILEFAVGYLRERSR 63


>RGD|621339 [details] [associations]
            symbol:Hes3 "hairy and enhancer of split 3 (Drosophila)"
            species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
            of transcription from RNA polymerase II promoter" evidence=IEA;ISO]
            [GO:0001701 "in utero embryonic development" evidence=IEA;ISO]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0021555 "midbrain-hindbrain boundary
            morphogenesis" evidence=IEA;ISO] [GO:0021557 "oculomotor nerve
            development" evidence=IEA;ISO] [GO:0021558 "trochlear nerve
            development" evidence=IEA;ISO] [GO:0021575 "hindbrain
            morphogenesis" evidence=IEA;ISO] [GO:0021915 "neural tube
            development" evidence=ISO] [GO:0030901 "midbrain development"
            evidence=IEA;ISO] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=IDA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA;ISO] [GO:0046983 "protein dimerization activity"
            evidence=IEA] [GO:0050767 "regulation of neurogenesis"
            evidence=ISO] [GO:0060164 "regulation of timing of neuron
            differentiation" evidence=IEA;ISO] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 PROSITE:PS51054
            SMART:SM00353 RGD:621339 GO:GO:0005634 GO:GO:0045892 GO:GO:0003677
            GO:GO:0001701 GO:GO:0045944 GO:GO:0006351 GO:GO:0000122
            GO:GO:0030901 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0021575
            GeneTree:ENSGT00700000104130 GO:GO:0021555 HOGENOM:HOG000236346
            GO:GO:0021557 GO:GO:0060164 GO:GO:0021558 CTD:390992
            eggNOG:NOG272757 HOVERGEN:HBG005959 KO:K09088 OrthoDB:EOG4PVP15
            EMBL:D13418 IPI:IPI00188115 PIR:S36749 RefSeq:NP_073178.1
            UniGene:Rn.48807 ProteinModelPortal:Q04667 STRING:Q04667
            PRIDE:Q04667 Ensembl:ENSRNOT00000014536 GeneID:64628 KEGG:rno:64628
            InParanoid:Q04667 NextBio:613582 Genevestigator:Q04667
            GermOnline:ENSRNOG00000010893 Uniprot:Q04667
        Length = 175

 Score = 118 (46.6 bits), Expect = 2.3e-07, P = 2.3e-07
 Identities = 29/73 (39%), Positives = 43/73 (58%)

Query:    18 LERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRRQ-QSLGLT 76
             +E+KRRARIN  L++L+ ++      +     KLEKADILEL+V+++  L+   Q L L 
Sbjct:     1 MEKKRRARINLSLEQLRSLLERHYSHQIRK-RKLEKADILELSVKYVRSLQNSLQGLWLV 59

Query:    77 PEAA-YADRFKAG 88
             P    Y   F+ G
Sbjct:    60 PSGVDYPSGFRGG 72


>UNIPROTKB|A6NFD8 [details] [associations]
            symbol:HELT "Hairy and enhancer of split-related protein
            HELT" species:9606 "Homo sapiens" [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0001967 "suckling behavior" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005667
            "transcription factor complex" evidence=IEA] [GO:0007417 "central
            nervous system development" evidence=IEA] [GO:0009791
            "post-embryonic development" evidence=IEA] [GO:0010259
            "multicellular organismal aging" evidence=IEA] [GO:0021858
            "GABAergic neuron differentiation in basal ganglia" evidence=IEA]
            [GO:0035264 "multicellular organism growth" evidence=IEA]
            [GO:0042803 "protein homodimerization activity" evidence=IEA]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 GO:GO:0003677
            GO:GO:0001967 GO:GO:0007417 GO:GO:0003700 GO:GO:0006351
            GO:GO:0005667 GO:GO:0000122 GO:GO:0009791 EMBL:CH471056
            GO:GO:0035264 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0010259
            CTD:391723 eggNOG:NOG330980 HOGENOM:HOG000082510 HOVERGEN:HBG054492
            OMA:PVSHKVI EMBL:AC093824 EMBL:BC140795 EMBL:BC144569
            IPI:IPI00398093 IPI:IPI00896528 RefSeq:NP_001025058.1
            UniGene:Hs.531242 ProteinModelPortal:A6NFD8 SMR:A6NFD8
            STRING:A6NFD8 PhosphoSite:A6NFD8 PRIDE:A6NFD8 DNASU:391723
            Ensembl:ENST00000338875 Ensembl:ENST00000505610 GeneID:391723
            KEGG:hsa:391723 UCSC:uc003ixa.3 UCSC:uc011ckq.2
            GeneCards:GC04P185940 HGNC:HGNC:33783 HPA:HPA036188
            neXtProt:NX_A6NFD8 PharmGKB:PA162390819 InParanoid:A6NFD8
            GenomeRNAi:391723 NextBio:104816 ArrayExpress:A6NFD8 Bgee:A6NFD8
            CleanEx:HS_HELT Genevestigator:A6NFD8 GO:GO:0021858 Uniprot:A6NFD8
        Length = 327

 Score = 84 (34.6 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
 Identities = 20/46 (43%), Positives = 30/46 (65%)

Query:     3 TLSIEV--VYPEVMKPMLERKRRARINRCLDELKEIMVTSLQAEGE 46
             TLS+E   V   V   ++E++RR RINRCL+EL + +  +L  +GE
Sbjct:    45 TLSVEESRVRTPVSHKVIEKRRRDRINRCLNELGKTVPMALAKQGE 90

 Score = 74 (31.1 bits), Expect = 5.5e-07, Sum P(2) = 5.5e-07
 Identities = 21/63 (33%), Positives = 34/63 (53%)

Query:    46 ENVSKLEKADILELTVRHLHKL------RRQQSLGLTPEAAYADRFKAGFTHCAAEVSQY 99
             ++  KLEKA+ILE+TV++L  L      R ++   L  E  +A+ F  G+  C   +  Y
Sbjct:   129 QSSGKLEKAEILEMTVQYLRALHSADFPRGREKAELLAE--FANYFHYGYHECMKNLVHY 186

Query:   100 LAS 102
             L +
Sbjct:   187 LTT 189


>UNIPROTKB|Q5EA15 [details] [associations]
            symbol:BHLHE40 "Class E basic helix-loop-helix protein 40"
            species:9913 "Bos taurus" [GO:0070888 "E-box binding" evidence=IEA]
            [GO:0046982 "protein heterodimerization activity" evidence=IEA]
            [GO:0043433 "negative regulation of sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0043426 "MRF
            binding" evidence=IEA] [GO:0043153 "entrainment of circadian clock
            by photoperiod" evidence=IEA] [GO:0042803 "protein homodimerization
            activity" evidence=IEA] [GO:0032922 "circadian regulation of gene
            expression" evidence=IEA] [GO:0019904 "protein domain specific
            binding" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
            [GO:0005730 "nucleolus" evidence=IEA] [GO:0003705 "RNA polymerase
            II distal enhancer sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0001191 "RNA polymerase II
            transcription factor binding transcription factor activity involved
            in negative regulation of transcription" evidence=IEA] [GO:0001102
            "RNA polymerase II activating transcription factor binding"
            evidence=IEA] [GO:0001078 "RNA polymerase II core promoter proximal
            region sequence-specific DNA binding transcription factor activity
            involved in negative regulation of transcription" evidence=IEA]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 GO:GO:0005794
            GO:GO:0005730 GO:GO:0001078 GO:GO:0003705 GO:GO:0032922
            GO:GO:0043433 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0070888
            EMBL:BT020754 IPI:IPI00685474 RefSeq:NP_001020100.1
            UniGene:Bt.23123 ProteinModelPortal:Q5EA15 STRING:Q5EA15
            Ensembl:ENSBTAT00000013008 GeneID:506945 KEGG:bta:506945 CTD:8553
            eggNOG:NOG281955 GeneTree:ENSGT00510000046898 HOGENOM:HOG000234381
            InParanoid:Q5EA15 KO:K03729 OMA:EQPYFKS OrthoDB:EOG4DZ1VV
            NextBio:20867812 GO:GO:0001191 GO:GO:0043153 InterPro:IPR018352
            SMART:SM00511 Uniprot:Q5EA15
        Length = 412

 Score = 121 (47.7 bits), Expect = 8.2e-07, P = 8.2e-07
 Identities = 37/103 (35%), Positives = 56/103 (54%)

Query:    17 MLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKL-----RRQQ 71
             ++E+KRR RIN C+ +LK+++   L+     +  LEKA +LELT++H+  L     ++QQ
Sbjct:    59 LIEKKRRDRINECIAQLKDLLPEHLKLT--TLGHLEKAVVLELTLKHVKALTNLIDQQQQ 116

Query:    72 SL-------------GLTPEAAYADRFKAGFTHCAAEVSQYLA 101
              +             G   EA   + F +GF  CA EV QYLA
Sbjct:   117 KIIALQSGLQAGDLSGRNVEAGQ-EMFCSGFQTCAREVLQYLA 158


>UNIPROTKB|E2RE12 [details] [associations]
            symbol:BHLHE40 "Uncharacterized protein" species:9615
            "Canis lupus familiaris" [GO:0070888 "E-box binding" evidence=IEA]
            [GO:0046982 "protein heterodimerization activity" evidence=IEA]
            [GO:0043433 "negative regulation of sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0043426 "MRF
            binding" evidence=IEA] [GO:0043153 "entrainment of circadian clock
            by photoperiod" evidence=IEA] [GO:0042803 "protein homodimerization
            activity" evidence=IEA] [GO:0032922 "circadian regulation of gene
            expression" evidence=IEA] [GO:0019904 "protein domain specific
            binding" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
            [GO:0005730 "nucleolus" evidence=IEA] [GO:0003705 "RNA polymerase
            II distal enhancer sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0001191 "RNA polymerase II
            transcription factor binding transcription factor activity involved
            in negative regulation of transcription" evidence=IEA] [GO:0001102
            "RNA polymerase II activating transcription factor binding"
            evidence=IEA] [GO:0001078 "RNA polymerase II core promoter proximal
            region sequence-specific DNA binding transcription factor activity
            involved in negative regulation of transcription" evidence=IEA]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 GO:GO:0005794
            GO:GO:0005730 GO:GO:0001078 GO:GO:0003705 GO:GO:0032922
            GO:GO:0043433 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0070888
            CTD:8553 GeneTree:ENSGT00510000046898 KO:K03729 OMA:EQPYFKS
            GO:GO:0001191 GO:GO:0043153 InterPro:IPR018352 SMART:SM00511
            EMBL:AAEX03012093 RefSeq:XP_541795.2 ProteinModelPortal:E2RE12
            Ensembl:ENSCAFT00000009043 GeneID:484680 KEGG:cfa:484680
            NextBio:20858773 Uniprot:E2RE12
        Length = 412

 Score = 121 (47.7 bits), Expect = 8.2e-07, P = 8.2e-07
 Identities = 37/103 (35%), Positives = 56/103 (54%)

Query:    17 MLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKL-----RRQQ 71
             ++E+KRR RIN C+ +LK+++   L+     +  LEKA +LELT++H+  L     ++QQ
Sbjct:    59 LIEKKRRDRINECIAQLKDLLPEHLKLT--TLGHLEKAVVLELTLKHVKALTNLIDQQQQ 116

Query:    72 SL-------------GLTPEAAYADRFKAGFTHCAAEVSQYLA 101
              +             G   EA   + F +GF  CA EV QYLA
Sbjct:   117 KIIALQSGLQAGELSGRNVEAGQ-EMFCSGFQTCAREVLQYLA 158


>UNIPROTKB|F1SFL2 [details] [associations]
            symbol:BHLHE40 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0070888 "E-box binding" evidence=IEA] [GO:0046982
            "protein heterodimerization activity" evidence=IEA] [GO:0043433
            "negative regulation of sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043426 "MRF binding"
            evidence=IEA] [GO:0043153 "entrainment of circadian clock by
            photoperiod" evidence=IEA] [GO:0042803 "protein homodimerization
            activity" evidence=IEA] [GO:0032922 "circadian regulation of gene
            expression" evidence=IEA] [GO:0019904 "protein domain specific
            binding" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
            [GO:0005730 "nucleolus" evidence=IEA] [GO:0003705 "RNA polymerase
            II distal enhancer sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0001191 "RNA polymerase II
            transcription factor binding transcription factor activity involved
            in negative regulation of transcription" evidence=IEA] [GO:0001102
            "RNA polymerase II activating transcription factor binding"
            evidence=IEA] [GO:0001078 "RNA polymerase II core promoter proximal
            region sequence-specific DNA binding transcription factor activity
            involved in negative regulation of transcription" evidence=IEA]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 GO:GO:0005794
            GO:GO:0005730 GO:GO:0001078 GO:GO:0003705 GO:GO:0032922
            GO:GO:0043433 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0070888
            CTD:8553 GeneTree:ENSGT00510000046898 KO:K03729 OMA:EQPYFKS
            GO:GO:0001191 GO:GO:0043153 InterPro:IPR018352 SMART:SM00511
            EMBL:CU469247 RefSeq:NP_001231939.1 UniGene:Ssc.8861
            Ensembl:ENSSSCT00000012624 GeneID:100514873 KEGG:ssc:100514873
            Uniprot:F1SFL2
        Length = 412

 Score = 121 (47.7 bits), Expect = 8.2e-07, P = 8.2e-07
 Identities = 37/103 (35%), Positives = 56/103 (54%)

Query:    17 MLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKL-----RRQQ 71
             ++E+KRR RIN C+ +LK+++   L+     +  LEKA +LELT++H+  L     ++QQ
Sbjct:    59 LIEKKRRDRINECIAQLKDLLPEHLKLT--TLGHLEKAVVLELTLKHVKALTNLIDQQQQ 116

Query:    72 SL-------------GLTPEAAYADRFKAGFTHCAAEVSQYLA 101
              +             G   EA   + F +GF  CA EV QYLA
Sbjct:   117 KIIALQSGLQAGDLSGRNVEAGQ-EMFCSGFQTCAREVLQYLA 158


>MGI|MGI:1097714 [details] [associations]
            symbol:Bhlhe40 "basic helix-loop-helix family, member e40"
            species:10090 "Mus musculus" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=ISO;IDA]
            [GO:0000981 "sequence-specific DNA binding RNA polymerase II
            transcription factor activity" evidence=ISO] [GO:0001078 "RNA
            polymerase II core promoter proximal region sequence-specific DNA
            binding transcription factor activity involved in negative
            regulation of transcription" evidence=ISO;IDA] [GO:0001102 "RNA
            polymerase II activating transcription factor binding"
            evidence=IDA] [GO:0001191 "RNA polymerase II transcription factor
            binding transcription factor activity involved in negative
            regulation of transcription" evidence=ISO] [GO:0003677 "DNA
            binding" evidence=IDA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
            of transcription from RNA polymerase II promoter" evidence=IDA]
            [GO:0006366 "transcription from RNA polymerase II promoter"
            evidence=ISO] [GO:0009649 "entrainment of circadian clock"
            evidence=ISO] [GO:0019904 "protein domain specific binding"
            evidence=ISO] [GO:0032922 "circadian regulation of gene expression"
            evidence=ISO;IMP] [GO:0042803 "protein homodimerization activity"
            evidence=ISO] [GO:0043153 "entrainment of circadian clock by
            photoperiod" evidence=IMP] [GO:0043425 "bHLH transcription factor
            binding" evidence=ISO] [GO:0043426 "MRF binding" evidence=IDA]
            [GO:0043433 "negative regulation of sequence-specific DNA binding
            transcription factor activity" evidence=ISO] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=IDA]
            [GO:0046982 "protein heterodimerization activity" evidence=ISO;IDA]
            [GO:0046983 "protein dimerization activity" evidence=IEA]
            [GO:0070888 "E-box binding" evidence=ISO;IDA] InterPro:IPR003650
            InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 MGI:MGI:1097714 GO:GO:0005794
            GO:GO:0005654 GO:GO:0005730 GO:GO:0001078 GO:GO:0003705
            GO:GO:0046982 GO:GO:0032922 GO:GO:0043433 Gene3D:4.10.280.10
            SUPFAM:SSF47459 GO:GO:0048168 GO:GO:0070888 CTD:8553
            eggNOG:NOG281955 HOGENOM:HOG000234381 KO:K03729 OMA:EQPYFKS
            OrthoDB:EOG4DZ1VV GO:GO:0001191 GO:GO:0043153 InterPro:IPR018352
            SMART:SM00511 GO:GO:0043426 GO:GO:0001102 EMBL:AF010305 EMBL:Y07836
            EMBL:AF364051 EMBL:BC010720 IPI:IPI00127808 RefSeq:NP_035628.1
            UniGene:Mm.2436 ProteinModelPortal:O35185 SMR:O35185 IntAct:O35185
            STRING:O35185 PhosphoSite:O35185 PRIDE:O35185
            Ensembl:ENSMUST00000032194 GeneID:20893 KEGG:mmu:20893
            InParanoid:O35185 Reactome:REACT_109335 Reactome:REACT_24972
            NextBio:299753 Bgee:O35185 CleanEx:MM_STRA13 Genevestigator:O35185
            GermOnline:ENSMUSG00000030103 Uniprot:O35185
        Length = 411

 Score = 120 (47.3 bits), Expect = 1.1e-06, P = 1.1e-06
 Identities = 37/103 (35%), Positives = 56/103 (54%)

Query:    17 MLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKL-----RRQQ 71
             ++E+KRR RIN C+ +LK+++   L+     +  LEKA +LELT++H+  L     ++QQ
Sbjct:    59 LIEKKRRDRINECIAQLKDLLPEHLKLT--TLGHLEKAVVLELTLKHVKALTNLIDQQQQ 116

Query:    72 SL-------------GLTPEAAYADRFKAGFTHCAAEVSQYLA 101
              +             G   EA   + F +GF  CA EV QYLA
Sbjct:   117 KIIALQSGLQAGDLSGRNLEAGQ-EMFCSGFQTCAREVLQYLA 158


>RGD|68439 [details] [associations]
            symbol:Bhlhe40 "basic helix-loop-helix family, member e40"
           species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
           of transcription from RNA polymerase II promoter" evidence=ISO;IMP]
           [GO:0000981 "sequence-specific DNA binding RNA polymerase II
           transcription factor activity" evidence=ISO] [GO:0001078 "RNA
           polymerase II core promoter proximal region sequence-specific DNA
           binding transcription factor activity involved in negative
           regulation of transcription" evidence=IEA;ISO] [GO:0001102 "RNA
           polymerase II activating transcription factor binding"
           evidence=IEA;ISO] [GO:0001191 "RNA polymerase II transcription
           factor binding transcription factor activity involved in negative
           regulation of transcription" evidence=IEA;ISO] [GO:0003677 "DNA
           binding" evidence=IEA;ISO] [GO:0003705 "RNA polymerase II distal
           enhancer sequence-specific DNA binding transcription factor
           activity" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=ISO;IDA]
           [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005794 "Golgi
           apparatus" evidence=IEA;ISO] [GO:0006351 "transcription,
           DNA-dependent" evidence=IEA] [GO:0006357 "regulation of
           transcription from RNA polymerase II promoter" evidence=ISO]
           [GO:0006366 "transcription from RNA polymerase II promoter"
           evidence=ISO] [GO:0007399 "nervous system development" evidence=NAS]
           [GO:0009649 "entrainment of circadian clock" evidence=IDA]
           [GO:0019904 "protein domain specific binding" evidence=IEA;ISO]
           [GO:0032922 "circadian regulation of gene expression"
           evidence=IEA;ISO] [GO:0042803 "protein homodimerization activity"
           evidence=IEA;ISO] [GO:0043153 "entrainment of circadian clock by
           photoperiod" evidence=IEA;ISO] [GO:0043425 "bHLH transcription
           factor binding" evidence=ISO] [GO:0043426 "MRF binding"
           evidence=IEA;ISO] [GO:0043433 "negative regulation of
           sequence-specific DNA binding transcription factor activity"
           evidence=IEA;ISO] [GO:0045892 "negative regulation of transcription,
           DNA-dependent" evidence=ISO] [GO:0046982 "protein heterodimerization
           activity" evidence=IEA;ISO] [GO:0046983 "protein dimerization
           activity" evidence=IEA] [GO:0048168 "regulation of neuronal synaptic
           plasticity" evidence=IEP;NAS] [GO:0070888 "E-box binding"
           evidence=IEA;ISO] InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010
           Pfam:PF07527 PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 RGD:68439
           GO:GO:0005634 GO:GO:0005794 GO:GO:0007399 GO:GO:0005730
           GO:GO:0009649 GO:GO:0001078 GO:GO:0003705 GO:GO:0000122
           GO:GO:0032922 GO:GO:0043433 Gene3D:4.10.280.10 SUPFAM:SSF47459
           GO:GO:0048168 GO:GO:0070888 CTD:8553 eggNOG:NOG281955
           HOGENOM:HOG000234381 KO:K03729 OrthoDB:EOG4DZ1VV GO:GO:0001191
           GO:GO:0043153 InterPro:IPR018352 SMART:SM00511 EMBL:AF009330
           IPI:IPI00212398 RefSeq:NP_445780.1 UniGene:Rn.81055
           ProteinModelPortal:O35780 STRING:O35780 PRIDE:O35780 GeneID:79431
           KEGG:rno:79431 UCSC:RGD:68439 InParanoid:O35780 NextBio:614795
           ArrayExpress:O35780 Genevestigator:O35780
           GermOnline:ENSRNOG00000007152 Uniprot:O35780
        Length = 411

 Score = 120 (47.3 bits), Expect = 1.1e-06, P = 1.1e-06
 Identities = 37/103 (35%), Positives = 56/103 (54%)

Query:    17 MLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKL-----RRQQ 71
             ++E+KRR RIN C+ +LK+++   L+     +  LEKA +LELT++H+  L     ++QQ
Sbjct:    59 LIEKKRRDRINECIAQLKDLLPEHLKLT--TLGHLEKAVVLELTLKHVKALTNLIDQQQQ 116

Query:    72 SL-------------GLTPEAAYADRFKAGFTHCAAEVSQYLA 101
              +             G   EA   + F +GF  CA EV QYLA
Sbjct:   117 KIMALQSGLQAGDLSGKNIEAGQ-EMFCSGFQTCAREVLQYLA 158


>UNIPROTKB|E1BQW8 [details] [associations]
            symbol:BHLHE40 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0001078 "RNA polymerase II core promoter
            proximal region sequence-specific DNA binding transcription factor
            activity involved in negative regulation of transcription"
            evidence=IEA] [GO:0001102 "RNA polymerase II activating
            transcription factor binding" evidence=IEA] [GO:0001191 "RNA
            polymerase II transcription factor binding transcription factor
            activity involved in negative regulation of transcription"
            evidence=IEA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005794
            "Golgi apparatus" evidence=IEA] [GO:0019904 "protein domain
            specific binding" evidence=IEA] [GO:0032922 "circadian regulation
            of gene expression" evidence=IEA] [GO:0042803 "protein
            homodimerization activity" evidence=IEA] [GO:0043153 "entrainment
            of circadian clock by photoperiod" evidence=IEA] [GO:0043426 "MRF
            binding" evidence=IEA] [GO:0043433 "negative regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0046982 "protein heterodimerization activity"
            evidence=IEA] [GO:0070888 "E-box binding" evidence=IEA]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 GO:GO:0005794
            GO:GO:0005730 GO:GO:0001078 GO:GO:0003705 GO:GO:0032922
            GO:GO:0043433 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0070888
            CTD:8553 GeneTree:ENSGT00510000046898 KO:K03729 OMA:EQPYFKS
            GO:GO:0001191 GO:GO:0043153 EMBL:AADN02014485 IPI:IPI00579574
            RefSeq:XP_414439.1 UniGene:Gga.15700 UniGene:Gga.49182
            UniGene:Gga.56020 PRIDE:E1BQW8 Ensembl:ENSGALT00000013524
            GeneID:416108 KEGG:gga:416108 NextBio:20819617 Uniprot:E1BQW8
        Length = 401

 Score = 118 (46.6 bits), Expect = 1.7e-06, P = 1.7e-06
 Identities = 35/102 (34%), Positives = 57/102 (55%)

Query:    17 MLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKL-----RRQQ 71
             ++E+KRR RIN C+ +LK+++   L+     +  LEKA +LELT++H+  L     ++QQ
Sbjct:    59 LIEKKRRDRINECIAQLKDLLPEHLKLT--TLGHLEKAVVLELTLKHVKALTALIEQQQQ 116

Query:    72 SL-----GLTPEAAYA-------DRFKAGFTHCAAEVSQYLA 101
              +     GL      A       + F++GF  CA E+ QY+A
Sbjct:   117 KILALQSGLQAGDLSARSLDSSQEMFRSGFQLCAKELLQYVA 158


>UNIPROTKB|O14503 [details] [associations]
            symbol:BHLHE40 "Class E basic helix-loop-helix protein 40"
            species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=NAS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=NAS]
            [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0001078 "RNA polymerase II core promoter
            proximal region sequence-specific DNA binding transcription factor
            activity involved in negative regulation of transcription"
            evidence=IDA] [GO:0043425 "bHLH transcription factor binding"
            evidence=IPI] [GO:0046982 "protein heterodimerization activity"
            evidence=IPI] [GO:0070888 "E-box binding" evidence=IDA] [GO:0000122
            "negative regulation of transcription from RNA polymerase II
            promoter" evidence=IDA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=ISS] [GO:0032922 "circadian regulation of gene
            expression" evidence=IDA] [GO:0043433 "negative regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IDA] [GO:0001191 "RNA polymerase II transcription factor
            binding transcription factor activity involved in negative
            regulation of transcription" evidence=IDA] [GO:0043153 "entrainment
            of circadian clock by photoperiod" evidence=ISS] [GO:0019904
            "protein domain specific binding" evidence=IPI] [GO:0042803
            "protein homodimerization activity" evidence=IDA] [GO:0001102 "RNA
            polymerase II activating transcription factor binding"
            evidence=ISS] [GO:0043426 "MRF binding" evidence=ISS] [GO:0000981
            "sequence-specific DNA binding RNA polymerase II transcription
            factor activity" evidence=IDA] [GO:0006366 "transcription from RNA
            polymerase II promoter" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 GO:GO:0005794
            GO:GO:0042803 GO:GO:0005730 Pathway_Interaction_DB:hif1_tfpathway
            GO:GO:0001078 GO:GO:0003705 GO:GO:0032922 GO:GO:0043433
            Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048168 GO:GO:0070888
            Pathway_Interaction_DB:circadianpathway CTD:8553 eggNOG:NOG281955
            HOGENOM:HOG000234381 KO:K03729 OMA:EQPYFKS OrthoDB:EOG4DZ1VV
            GO:GO:0001191 GO:GO:0043153 InterPro:IPR018352 SMART:SM00511
            EMBL:AB004066 EMBL:AB043885 EMBL:BC082238 EMBL:AH010709
            IPI:IPI00021143 PIR:JC5547 RefSeq:NP_003661.1 UniGene:Hs.740380
            ProteinModelPortal:O14503 SMR:O14503 IntAct:O14503
            MINT:MINT-1374397 STRING:O14503 PhosphoSite:O14503 PRIDE:O14503
            DNASU:8553 Ensembl:ENST00000256495 GeneID:8553 KEGG:hsa:8553
            UCSC:uc003bqf.3 GeneCards:GC03P004997 HGNC:HGNC:1046 HPA:HPA028921
            MIM:604256 neXtProt:NX_O14503 PharmGKB:PA25347 InParanoid:O14503
            PhylomeDB:O14503 Reactome:REACT_24941 ChiTaRS:BHLHE40
            GenomeRNAi:8553 NextBio:32049 ArrayExpress:O14503 Bgee:O14503
            CleanEx:HS_DEC1 CleanEx:HS_STRA13 Genevestigator:O14503
            GermOnline:ENSG00000134107 GO:GO:0043426 GO:GO:0001102
            Uniprot:O14503
        Length = 412

 Score = 117 (46.2 bits), Expect = 2.2e-06, P = 2.2e-06
 Identities = 35/102 (34%), Positives = 54/102 (52%)

Query:    17 MLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKL-----RRQQ 71
             ++E+KRR RIN C+ +LK+++   L+     +  LEKA +LELT++H+  L     ++QQ
Sbjct:    59 LIEKKRRDRINECIAQLKDLLPEHLKLT--TLGHLEKAVVLELTLKHVKALTNLIDQQQQ 116

Query:    72 SLGLTPEAAYA------------DRFKAGFTHCAAEVSQYLA 101
              +        A            + F +GF  CA EV QYLA
Sbjct:   117 KIIALQSGLQAGELSGRNVETGQEMFCSGFQTCAREVLQYLA 158


>ZFIN|ZDB-GENE-060815-1 [details] [associations]
            symbol:her4.2 "hairy-related 4.2" species:7955 "Danio
            rerio" [GO:0046983 "protein dimerization activity" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0048936 "peripheral nervous system neuron
            axonogenesis" evidence=IGI] InterPro:IPR003650 InterPro:IPR011598
            Pfam:PF00010 PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353
            ZFIN:ZDB-GENE-060815-1 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
            GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR018352
            SMART:SM00511 HOVERGEN:HBG005960 GO:GO:0048936 UniGene:Dr.106526
            UniGene:Dr.121752 UniGene:Dr.32742 EMBL:BC049296 EMBL:BC159219
            IPI:IPI00955322 InParanoid:Q7ZUF1 Uniprot:Q7ZUF1
        Length = 152

 Score = 106 (42.4 bits), Expect = 4.3e-06, P = 4.3e-06
 Identities = 27/106 (25%), Positives = 53/106 (50%)

Query:    12 EVMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRRQQ 71
             ++ KPM+E+ RR RIN  +++LK ++      +  + S+ EKADILE+T+  L + ++  
Sbjct:    19 KLRKPMVEKIRRERINSSIEKLKTLLAQEFVKQQPD-SRQEKADILEMTLDFLRRSQKSS 77

Query:    72 SLGLTPEAAYADRFKAGFTHCAAEVSQYLA-SSMQQHQQQPSTEPT 116
             + G    +       +  + C  +   +     +  H Q P+ + T
Sbjct:    78 AAG-DGRSRCVQEAVSFLSQCPVQTQSHTRLMKLFLHMQTPADQHT 122


>ZFIN|ZDB-GENE-081031-104 [details] [associations]
            symbol:her4.4 "hairy-related 4.4" species:7955
            "Danio rerio" [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
            activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0048936 "peripheral nervous system neuron axonogenesis"
            evidence=IGI] InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353
            ZFIN:ZDB-GENE-081031-104 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
            GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR018352
            SMART:SM00511 GeneTree:ENSGT00700000104168 HOGENOM:HOG000236346
            HOVERGEN:HBG005960 OrthoDB:EOG495ZT5 EMBL:CU062502 IPI:IPI00866511
            RefSeq:NP_001121862.1 UniGene:Dr.32742 Ensembl:ENSDART00000079265
            GeneID:100149066 KEGG:dre:100149066 OMA:RHENSTS NextBio:20792691
            Uniprot:B0V3D3
        Length = 152

 Score = 106 (42.4 bits), Expect = 4.3e-06, P = 4.3e-06
 Identities = 27/106 (25%), Positives = 53/106 (50%)

Query:    12 EVMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRRQQ 71
             ++ KPM+E+ RR RIN  +++LK ++      +  + S+ EKADILE+T+  L + ++  
Sbjct:    19 KLRKPMVEKIRRERINSSIEKLKTLLAQEFVKQQPD-SRQEKADILEMTLDFLRRSQKSS 77

Query:    72 SLGLTPEAAYADRFKAGFTHCAAEVSQYLA-SSMQQHQQQPSTEPT 116
             + G    +       +  + C  +   +     +  H Q P+ + T
Sbjct:    78 AAG-DGRSRCVQEAVSFLSQCPVQTQSHTRLMKLFLHMQTPADQHT 122


>ZFIN|ZDB-GENE-081030-7 [details] [associations]
            symbol:her4.3 "hairy-related 4.3" species:7955 "Danio
            rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0046983 "protein dimerization activity" evidence=IEA]
            [GO:0048936 "peripheral nervous system neuron axonogenesis"
            evidence=IGI] InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353
            ZFIN:ZDB-GENE-081030-7 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
            GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR018352
            SMART:SM00511 GeneTree:ENSGT00700000104168 HOGENOM:HOG000236346
            HOVERGEN:HBG005960 GO:GO:0048936 EMBL:CU062502 IPI:IPI00858755
            RefSeq:NP_001154880.1 UniGene:Dr.106526 UniGene:Dr.121752
            Ensembl:ENSDART00000104209 GeneID:792198 KEGG:dre:792198 CTD:792198
            eggNOG:NOG313575 NextBio:20930951 Uniprot:B0V3D2
        Length = 152

 Score = 105 (42.0 bits), Expect = 5.5e-06, P = 5.5e-06
 Identities = 27/106 (25%), Positives = 53/106 (50%)

Query:    12 EVMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRRQQ 71
             ++ KPM+E+ RR RIN  +++LK ++      +  + S+ EKADILE+T+  L + ++  
Sbjct:    19 KLRKPMVEKIRRERINSSIEKLKTLLAQEFIKQQPD-SRQEKADILEMTLDFLRRSQKSS 77

Query:    72 SLGLTPEAAYADRFKAGFTHCAAEVSQYLA-SSMQQHQQQPSTEPT 116
             + G    +       +  + C  +   +     +  H Q P+ + T
Sbjct:    78 AAG-DGRSRCVQEAVSFLSQCPVQTQSHTRLMKLFLHMQTPADQHT 122


>ZFIN|ZDB-GENE-980526-521 [details] [associations]
            symbol:her4.1 "hairy-related 4.1" species:7955
            "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0046983 "protein dimerization activity" evidence=IEA]
            [GO:0009952 "anterior/posterior pattern specification"
            evidence=IGI] [GO:0007219 "Notch signaling pathway" evidence=IMP]
            [GO:0001757 "somite specification" evidence=IMP] [GO:0005634
            "nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0003690 "double-stranded DNA binding"
            evidence=IDA] [GO:0048936 "peripheral nervous system neuron
            axonogenesis" evidence=IGI] InterPro:IPR003650 InterPro:IPR011598
            Pfam:PF00010 PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353
            ZFIN:ZDB-GENE-980526-521 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
            GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR018352
            SMART:SM00511 GeneTree:ENSGT00700000104168 HOVERGEN:HBG005960
            EMBL:CU062502 UniGene:Dr.32742 EMBL:BC152180 EMBL:X97332
            IPI:IPI00836849 RefSeq:NP_001096598.1 Ensembl:ENSDART00000079274
            GeneID:100149863 KEGG:dre:100149863 InParanoid:Q90466 OMA:TDYQRIR
            NextBio:20793484 Uniprot:Q90466
        Length = 152

 Score = 105 (42.0 bits), Expect = 5.5e-06, P = 5.5e-06
 Identities = 27/106 (25%), Positives = 53/106 (50%)

Query:    12 EVMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRRQQ 71
             ++ KPM+E+ RR RIN  +++LK ++      +  + S+ EKADILE+T+  L + ++  
Sbjct:    19 KLRKPMVEKIRRERINSSIEKLKTLLAQEFIKQQPD-SRQEKADILEMTLDFLRRSQKSS 77

Query:    72 SLGLTPEAAYADRFKAGFTHCAAEVSQYLA-SSMQQHQQQPSTEPT 116
             + G    +       +  + C  +   +     +  H Q P+ + T
Sbjct:    78 AAG-DGRSRCVQEAVSFLSQCPVQTQSHTRLMKLFLHMQTPADQHT 122


>UNIPROTKB|E2R9I1 [details] [associations]
            symbol:PABPC4 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0046983 "protein dimerization activity"
            evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
            "nucleotide binding" evidence=IEA] InterPro:IPR000504
            InterPro:IPR002004 InterPro:IPR006515 InterPro:IPR011598
            InterPro:IPR012677 Pfam:PF00010 Pfam:PF00076 Pfam:PF00658
            PROSITE:PS50102 PROSITE:PS50888 PROSITE:PS51309 SMART:SM00353
            SMART:SM00360 SMART:SM00517 GO:GO:0000166 Gene3D:3.30.70.330
            GO:GO:0003723 Gene3D:4.10.280.10 SUPFAM:SSF47459
            Gene3D:1.10.1900.10 SUPFAM:SSF63570 TIGRFAMs:TIGR01628
            GeneTree:ENSGT00640000091232 EMBL:AAEX03009572
            Ensembl:ENSCAFT00000004949 Uniprot:E2R9I1
        Length = 700

 Score = 115 (45.5 bits), Expect = 7.8e-06, P = 7.8e-06
 Identities = 27/64 (42%), Positives = 42/64 (65%)

Query:    17 MLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRRQQSLGLT 76
             ++E++RR RIN  L EL+ ++ T+ + +G   SKLEKA++L++TV HL  L    + G T
Sbjct:    50 IIEKRRRDRINSSLSELRRLVPTAFEKQGS--SKLEKAEVLQMTVDHLKMLH---ATGGT 104

Query:    77 PEAA 80
              E A
Sbjct:   105 AERA 108


>ZFIN|ZDB-GENE-040824-4 [details] [associations]
            symbol:her11 "hairy-related 11" species:7955 "Danio
            rerio" [GO:0046983 "protein dimerization activity" evidence=IEA]
            [GO:0030917 "midbrain-hindbrain boundary development" evidence=IMP]
            [GO:0046982 "protein heterodimerization activity" evidence=IPI]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0050768 "negative
            regulation of neurogenesis" evidence=IMP] InterPro:IPR011598
            Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 ZFIN:ZDB-GENE-040824-4
            Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0050768 HSSP:P61244
            GO:GO:0030917 GeneTree:ENSGT00700000104130 EMBL:FP015860
            EMBL:BC162348 EMBL:BC162354 EMBL:AY312568 IPI:IPI00502542
            RefSeq:NP_001003886.1 UniGene:Dr.84178 STRING:Q6W4T8
            Ensembl:ENSDART00000026907 GeneID:445409 KEGG:dre:445409 CTD:445409
            HOVERGEN:HBG097489 InParanoid:Q6W4T8 NextBio:20832113
            Uniprot:Q6W4T8
        Length = 274

 Score = 109 (43.4 bits), Expect = 7.8e-06, P = 7.8e-06
 Identities = 23/57 (40%), Positives = 38/57 (66%)

Query:    14 MKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRRQ 70
             +KP++E+KRR RIN  LD L++++  +         KLEKA+IL+L V+++ K  R+
Sbjct:    19 LKPVIEKKRRDRINHNLDALRDLLFKNTADTRLQNPKLEKAEILDLAVQYIKKTIRK 75


>UNIPROTKB|B8ZZA9 [details] [associations]
            symbol:HES6 "Transcription cofactor HES-6" species:9606
            "Homo sapiens" [GO:0046983 "protein dimerization activity"
            evidence=IEA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
            SMART:SM00353 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC016757
            HGNC:HGNC:18254 ChiTaRS:HES6 IPI:IPI00916699
            ProteinModelPortal:B8ZZA9 SMR:B8ZZA9 STRING:B8ZZA9 PRIDE:B8ZZA9
            Ensembl:ENST00000409574 ArrayExpress:B8ZZA9 Bgee:B8ZZA9
            Uniprot:B8ZZA9
        Length = 112

 Score = 102 (41.0 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 28/66 (42%), Positives = 38/66 (57%)

Query:    15 KPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELT-VRHLHKLRRQQSL 73
             KP++E+KRRARIN  L EL+ ++     A  E  +KLE A++LELT      + R   SL
Sbjct:    30 KPLVEKKRRARINESLQELRLLL-----AGAEVQAKLENAEVLELTSASSCRRKRASASL 84

Query:    74 GLTPEA 79
               T  A
Sbjct:    85 PATSSA 90


>UNIPROTKB|E2RRZ7 [details] [associations]
            symbol:HES7 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0048511 "rhythmic process" evidence=IEA]
            [GO:0036342 "post-anal tail morphogenesis" evidence=IEA]
            [GO:0007219 "Notch signaling pathway" evidence=IEA] [GO:0001756
            "somitogenesis" evidence=IEA] [GO:0001501 "skeletal system
            development" evidence=IEA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0046983 "protein
            dimerization activity" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 GO:GO:0005634
            GO:GO:0003677 GO:GO:0007219 GO:GO:0006351 GO:GO:0048511
            GO:GO:0000122 GO:GO:0001756 GO:GO:0001501 Gene3D:4.10.280.10
            SUPFAM:SSF47459 GeneTree:ENSGT00700000104130 OMA:LSGFREC
            EMBL:AAEX03003640 EMBL:AAEX03003639 Ensembl:ENSCAFT00000026848
            Uniprot:E2RRZ7
        Length = 228

 Score = 104 (41.7 bits), Expect = 1.8e-05, P = 1.8e-05
 Identities = 31/92 (33%), Positives = 53/92 (57%)

Query:    11 PEVMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRRQ 70
             P+++KP++E++RR RINR L+EL+ +++   + +     KLE ++ILE  V +L +  R 
Sbjct:    13 PKMLKPLVEKRRRDRINRSLEELRLLLLERTRDQNLRNPKLE-SEILEFAVGYLREPSRV 71

Query:    71 QSLGLTPEAAYADRFKAGFTHCAAEVSQYLAS 102
             +     P AA A     G     A+ ++ LAS
Sbjct:    72 E-----PPAAAAP----GVPRSPAQDAEALAS 94


>FB|FBgn0259938 [details] [associations]
            symbol:cwo "clockwork orange" species:7227 "Drosophila
            melanogaster" [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=ISS]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0046983 "protein
            dimerization activity" evidence=IEA] [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=IDA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IDA] [GO:0042752
            "regulation of circadian rhythm" evidence=IMP] [GO:0032922
            "circadian regulation of gene expression" evidence=IMP]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 Pfam:PF07527
            PROSITE:PS50888 PROSITE:PS51054 SMART:SM00353 EMBL:AE014297
            GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
            GO:GO:0042752 GO:GO:0000122 GO:GO:0032922 Gene3D:4.10.280.10
            SUPFAM:SSF47459 InterPro:IPR018352 SMART:SM00511
            GeneTree:ENSGT00700000104168 FlyBase:FBgn0259938 RefSeq:NP_524775.1
            UniGene:Dm.11736 ProteinModelPortal:Q9VGZ5 SMR:Q9VGZ5 STRING:Q9VGZ5
            EnsemblMetazoa:FBtr0082246 GeneID:44669 KEGG:dme:Dmel_CG17100
            UCSC:CG17100-RA CTD:44669 InParanoid:Q9VGZ5 OMA:QDPLSHR
            PhylomeDB:Q9VGZ5 GenomeRNAi:44669 NextBio:837532
            ArrayExpress:Q9VGZ5 Bgee:Q9VGZ5 Uniprot:Q9VGZ5
        Length = 698

 Score = 111 (44.1 bits), Expect = 2.1e-05, P = 2.1e-05
 Identities = 26/84 (30%), Positives = 48/84 (57%)

Query:    17 MLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRRQQSLGLT 76
             ++E++RR R+N CL +L  ++    Q +G    ++EK +I+E+ +RHL  L   QS    
Sbjct:    69 IIEKRRRDRMNSCLADLSRLIPPQYQRKGRG--RIEKTEIIEMAIRHLKHL---QSECQQ 123

Query:    77 PEAAYADRFKAGFTHCAAEVSQYL 100
              E+ Y    ++G+  C  E +++L
Sbjct:   124 KESDY----RSGYMDCMKEAAKFL 143


>ZFIN|ZDB-GENE-990415-90 [details] [associations]
            symbol:her5 "hairy-related 5" species:7955 "Danio
            rerio" [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0046983 "protein dimerization activity"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0050768
            "negative regulation of neurogenesis" evidence=IMP] [GO:0007492
            "endoderm development" evidence=IMP] [GO:0048562 "embryonic organ
            morphogenesis" evidence=IMP] [GO:0030917 "midbrain-hindbrain
            boundary development" evidence=IMP] [GO:0005634 "nucleus"
            evidence=IEA;IC] [GO:0045737 "positive regulation of
            cyclin-dependent protein kinase activity" evidence=IMP] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=NAS] [GO:0042803 "protein homodimerization activity"
            evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0046982 "protein heterodimerization activity" evidence=IPI]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
            PROSITE:PS51054 SMART:SM00353 ZFIN:ZDB-GENE-990415-90 GO:GO:0005634
            GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
            SUPFAM:SSF47459 GO:GO:0007492 GO:GO:0050768 GO:GO:0045737
            GO:GO:0030917 GeneTree:ENSGT00700000104130 GO:GO:0048562
            EMBL:FP015860 IPI:IPI00995421 Ensembl:ENSDART00000145336
            ArrayExpress:F1QJS9 Bgee:F1QJS9 Uniprot:F1QJS9
        Length = 227

 Score = 103 (41.3 bits), Expect = 2.3e-05, P = 2.3e-05
 Identities = 25/65 (38%), Positives = 40/65 (61%)

Query:    13 VMKPMLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKLRRQQS 72
             V KP++E++RR RIN+ L+ L+ +++ +   E     K+EKA+ILE  V   H LR +Q+
Sbjct:    31 VPKPLMEKRRRDRINQSLETLRMLLLENTNNEKLKNPKVEKAEILESVV---HFLRAEQA 87

Query:    73 LGLTP 77
                 P
Sbjct:    88 SETDP 92


>UNIPROTKB|J9P5L5 [details] [associations]
            symbol:BHLHE41 "Uncharacterized protein" species:9615
            "Canis lupus familiaris" [GO:0046983 "protein dimerization
            activity" evidence=IEA] InterPro:IPR011598 Pfam:PF00010
            PROSITE:PS50888 SMART:SM00353 Gene3D:4.10.280.10 SUPFAM:SSF47459
            GeneTree:ENSGT00510000046898 EMBL:AAEX03015183 EMBL:AAEX03015184
            Ensembl:ENSCAFT00000048161 Uniprot:J9P5L5
        Length = 325

 Score = 106 (42.4 bits), Expect = 2.3e-05, P = 2.3e-05
 Identities = 22/51 (43%), Positives = 35/51 (68%)

Query:    17 MLERKRRARINRCLDELKEIMVTSLQAEGENVSKLEKADILELTVRHLHKL 67
             ++E+KRR RIN C+ +LK+++   L+     +  LEKA +LELT++HL  L
Sbjct:    51 LIEKKRRDRINECIAQLKDLLPEHLKLT--TLGHLEKAVVLELTLKHLKAL 99


>UNIPROTKB|E1BRR2 [details] [associations]
            symbol:E1BRR2 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000979 "RNA polymerase II core promoter
            sequence-specific DNA binding" evidence=IEA] [GO:0000983 "RNA
            polymerase II core promoter sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0001077 "RNA
            polymerase II core promoter proximal region sequence-specific DNA
            binding transcription factor activity involved in positive
            regulation of transcription" evidence=IEA] [GO:0001106 "RNA
            polymerase II transcription corepressor activity" evidence=IEA]
            [GO:0003151 "outflow tract morphogenesis" evidence=IEA] [GO:0003181
            "atrioventricular valve morphogenesis" evidence=IEA] [GO:0003184
            "pulmonary valve morphogenesis" evidence=IEA] [GO:0003198
            "epithelial to mesenchymal transition involved in endocardial
            cushion formation" evidence=IEA] [GO:0003208 "cardiac ventricle
            morphogenesis" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0007219 "Notch signaling pathway" evidence=IEA] [GO:0032835
            "glomerulus development" evidence=IEA] [GO:0035939 "microsatellite
            binding" evidence=IEA] [GO:0042803 "protein homodimerization
            activity" evidence=IEA] [GO:0045666 "positive regulation of neuron
            differentiation" evidence=IEA] [GO:0046982 "protein
            heterodimerization activity" evidence=IEA] [GO:0050683 "AF-1 domain
            binding" evidence=IEA] [GO:0060412 "ventricular septum
            morphogenesis" evidence=IEA] [GO:0060766 "negative regulation of
            androgen receptor signaling pathway" evidence=IEA] [GO:0071773
            "cellular response to BMP stimulus" evidence=IEA] [GO:0072014
            "proximal tubule development" evidence=IEA] [GO:2000824 "negative
            regulation of androgen receptor activity" evidence=IEA]
            InterPro:IPR003650 InterPro:IPR011598 Pfam:PF07527 PROSITE:PS51054
            SMART:SM00353 GO:GO:0005737 GO:GO:0007219 GO:GO:0001077
            GO:GO:0071773 Gene3D:4.10.280.10 GO:GO:0000979 GO:GO:0001106
            GO:GO:0000983 InterPro:IPR018352 SMART:SM00511 GO:GO:0060766
            GeneTree:ENSGT00700000104130 GO:GO:2000824 GO:GO:0035939
            OMA:HSWVSEI EMBL:AADN02043738 EMBL:AADN02043739 IPI:IPI00680815
            Ensembl:ENSGALT00000034973 Uniprot:E1BRR2
        Length = 324

 Score = 98 (39.6 bits), Expect = 0.00017, P = 0.00017
 Identities = 27/71 (38%), Positives = 35/71 (49%)

Query:    42 QAEGENVSKLEKADILELTVRHLHKLRRQQSLGLTPEAAYADRFKA-GFTHCAAEVSQYL 100
             Q +G   SKLEKA+IL++TV HL  L      G     A A  +++ GF  C  EV +YL
Sbjct:    85 QRQGS--SKLEKAEILQMTVDHLKMLHATGGAGFLDARALAVDYRSIGFRECLTEVVRYL 142

Query:   101 ASSMQQHQQQP 111
                  Q    P
Sbjct:   143 GVLEGQSTADP 153


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.315   0.127   0.349    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      122       122   0.00091  102 3  10 23  0.37    31
                                                     29  0.49    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  159
  No. of states in DFA:  585 (62 KB)
  Total size of DFA:  151 KB (2092 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:01
  No. of threads or processors used:  24
  Search cpu time:  19.48u 0.08s 19.56t   Elapsed:  00:00:02
  Total cpu time:  19.50u 0.08s 19.58t   Elapsed:  00:00:03
  Start:  Thu Aug 15 12:38:59 2013   End:  Thu Aug 15 12:39:02 2013
WARNINGS ISSUED:  1

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