Your job contains 1 sequence.
>psy14660
MVLESTMICVDNSDFMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLAMADSVEV
LATLTSDVGRILSKLHQVQPNGNINFMTGIRIAHLALKHRQGKNHKMRIIAFVGSPVDLE
ERELTKLAKRLKKEKVNVDIVSFGEEVVNTELLNTFISTLNGKDGSGSHMVTVAVGPHLS
DALISSPIIQGEDGAGGAPGSSYEFGVDPNEDPELALALRVSMEEQRARQESEARRAAEG
ASGADTSASSAVPKPTAEAKDAPGDMATAAHPVGGQPDFATMTEEEQIAFAMQMSMQDTQ
EPAASSSKAPASAAASEEAKAEPMDTDEMVNDAAFLQSVLENLPGVDPQSAEVRHALSSS
AEKPAKKKDEKKEKK
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy14660
(375 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
MGI|MGI:1201670 - symbol:Psmd4 "proteasome (prosome, macr... 1030 5.3e-104 1
UNIPROTKB|Q58DA0 - symbol:PSMD4 "26S proteasome non-ATPas... 1029 6.7e-104 1
UNIPROTKB|P55036 - symbol:PSMD4 "26S proteasome non-ATPas... 1029 6.7e-104 1
UNIPROTKB|Q5VWC4 - symbol:PSMD4 "26S proteasome non-ATPas... 1028 8.6e-104 1
UNIPROTKB|Q32YV9 - symbol:PSMD4 "Uncharacterized protein"... 1028 8.6e-104 1
RGD|621109 - symbol:Psmd4 "proteasome (prosome, macropain... 1026 1.4e-103 1
UNIPROTKB|F1PRW0 - symbol:PSMD4 "Uncharacterized protein"... 1024 2.3e-103 1
UNIPROTKB|O88321 - symbol:Psmd4 "Proteasome (Prosome, mac... 1024 2.3e-103 1
FB|FBgn0015283 - symbol:Rpn10 "Regulatory particle non-AT... 839 2.0e-102 2
ZFIN|ZDB-GENE-050417-96 - symbol:psmd4b "proteasome (pros... 1007 1.4e-101 1
ZFIN|ZDB-GENE-040625-104 - symbol:psmd4a "proteasome (pro... 990 9.1e-100 1
UNIPROTKB|Q58D01 - symbol:PSMD4 "26S proteasome non-ATPas... 955 4.7e-96 1
UNIPROTKB|D4A9C9 - symbol:Psmd4 "Protein Psmd4" species:1... 952 9.7e-96 1
UNIPROTKB|A2A3N6 - symbol:PIPSL "Putative PIP5K1A and PSM... 908 4.5e-91 1
UNIPROTKB|A6PVX3 - symbol:PSMD4 "26S proteasome non-ATPas... 795 4.2e-79 1
UNIPROTKB|H9KYX1 - symbol:H9KYX1 "Uncharacterized protein... 775 5.5e-77 1
UNIPROTKB|H9KYX2 - symbol:H9KYX2 "Uncharacterized protein... 748 4.0e-74 1
WB|WBGene00004466 - symbol:rpn-10 species:6239 "Caenorhab... 705 1.4e-69 1
TAIR|locus:2121269 - symbol:RPN10 "regulatory particle no... 608 2.7e-59 1
DICTYBASE|DDB_G0275775 - symbol:psmD4 "ubiquitin interact... 534 2.9e-56 2
CGD|CAL0005551 - symbol:RPN10 species:5476 "Candida albic... 544 1.7e-52 1
SGD|S000001243 - symbol:RPN10 "Non-ATPase base subunit of... 506 1.8e-48 1
POMBASE|SPAC637.10c - symbol:rpn10 "19S proteasome regula... 501 6.0e-48 1
UNIPROTKB|G4MS79 - symbol:MGG_04506 "26S proteasome non-A... 451 1.2e-42 1
UNIPROTKB|H0Y3Y9 - symbol:PSMD4 "26S proteasome non-ATPas... 170 1.6e-12 1
>MGI|MGI:1201670 [details] [associations]
symbol:Psmd4 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 4" species:10090 "Mus musculus" [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0022624
"proteasome accessory complex" evidence=IDA] InterPro:IPR002035
InterPro:IPR027040 PROSITE:PS50234 SMART:SM00327 MGI:MGI:1201670
Pfam:PF02809 GO:GO:0005737 KO:K03029 InterPro:IPR003903
SMART:SM00726 PROSITE:PS50330 eggNOG:COG5148 OrthoDB:EOG4JQ3Z0
GO:GO:0022624 HOGENOM:HOG000165630 OMA:SDYQRNG PANTHER:PTHR10223
CTD:5710 GeneTree:ENSGT00530000064050 HOVERGEN:HBG000425
ChiTaRS:PSMD4 EMBL:AF013099 EMBL:AB029090 EMBL:AB029142
EMBL:AB029143 EMBL:AB029144 EMBL:AB029145 EMBL:AB029146
EMBL:AF175574 EMBL:BC009005 IPI:IPI00128564 IPI:IPI00230569
IPI:IPI00230570 IPI:IPI00345779 IPI:IPI00381291 PIR:JC6535
RefSeq:NP_032977.1 UniGene:Mm.2261 ProteinModelPortal:O35226
SMR:O35226 IntAct:O35226 MINT:MINT-2841145 STRING:O35226
PhosphoSite:O35226 REPRODUCTION-2DPAGE:IPI00345779 PaxDb:O35226
PRIDE:O35226 Ensembl:ENSMUST00000071664 Ensembl:ENSMUST00000107237
Ensembl:ENSMUST00000117355 GeneID:19185 KEGG:mmu:19185
UCSC:uc008qhr.1 UCSC:uc008qht.1 UCSC:uc008qhu.1 UCSC:uc008qhv.1
NextBio:295886 Bgee:O35226 Genevestigator:O35226
GermOnline:ENSMUSG00000005625 Uniprot:O35226
Length = 376
Score = 1030 (367.6 bits), Expect = 5.3e-104, P = 5.3e-104
Identities = 217/357 (60%), Positives = 247/357 (69%)
Query: 1 MVLESTMICVDNSDFMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLAMADSVEV 60
MVLESTM+CVDNS++MRNGDFLPTRLQAQQDAVN+VCHSKTRSNPENNVGL+ +A+ EV
Sbjct: 1 MVLESTMVCVDNSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITLANDCEV 60
Query: 61 LATLTSDVGRILSKLHQVQPNGNINFMTGIRIAHLALKHRQGKNHKMRIIAFVGSPVDLE 120
L TLT D GRILSKLH VQP G I F TGIR+AHLALKHRQGKNHKMRIIAFVGSPV+
Sbjct: 61 LTTLTPDTGRILSKLHTVQPKGKITFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPVEDN 120
Query: 121 ERELTKLAKRLKKEKVNVDIVSFGEEVVNTELLNTFISTLNGKDGSGSHMVTVAVGPHLS 180
E++L KLAKRLKKEKVNVDI++FGEE VNTE L F++TLNGKDG+GSH+VTV GP L+
Sbjct: 121 EKDLVKLAKRLKKEKVNVDIINFGEEEVNTEKLTAFVNTLNGKDGTGSHLVTVPPGPSLA 180
Query: 181 DALISSPIIQGEDGAG-GAPGSSYEFGVDPNEDPELALALRVSMXXXXXXXXXXXXXXXX 239
DALISSPI+ GE GA G S +EFGVDP+ DPELALALRVSM
Sbjct: 181 DALISSPILAGEGGAMLGLGASDFEFGVDPSADPELALALRVSMEEQRQRQEEEARRAAA 240
Query: 240 XXXXXXXXXXXXVPKPTAEAKDAPGDMATAAHPVG--GQPDFATMTEEEQIAFAMQMSMQ 297
P T ++ DA M G G PD ++MTEEEQIA+AMQMS+Q
Sbjct: 241 ASAAEAGIAT---PG-TEDSDDALLKMTINQQEFGRPGLPDLSSMTEEEQIAYAMQMSLQ 296
Query: 298 DTQXXXXXXXXXXXXXXXXXXXXXXXMDTDEMVNDAAFLQSVLENLPGVDPQSAEVR 354
T+ D D M D FLQSVLENLPGVDP +A +R
Sbjct: 297 GTEFSQESADMDASSAMDTSDPVKEEDDYDVM-QDPEFLQSVLENLPGVDPNNAAIR 352
>UNIPROTKB|Q58DA0 [details] [associations]
symbol:PSMD4 "26S proteasome non-ATPase regulatory subunit
4" species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] InterPro:IPR002035
InterPro:IPR027040 PROSITE:PS50234 SMART:SM00327 Pfam:PF02809
KO:K03029 InterPro:IPR003903 SMART:SM00726 PROSITE:PS50330
eggNOG:COG5148 OrthoDB:EOG4JQ3Z0 GO:GO:0022624 HOGENOM:HOG000165630
OMA:SDYQRNG PANTHER:PTHR10223 EMBL:BT021555 EMBL:BT021697
EMBL:BT021757 EMBL:BT026173 EMBL:BC119964 IPI:IPI00704307
RefSeq:NP_001013616.2 UniGene:Bt.104130 UniGene:Bt.12570
ProteinModelPortal:Q58DA0 SMR:Q58DA0 STRING:Q58DA0 PRIDE:Q58DA0
Ensembl:ENSBTAT00000008019 GeneID:282016 KEGG:bta:282016 CTD:5710
GeneTree:ENSGT00530000064050 HOVERGEN:HBG000425 InParanoid:Q58DA0
NextBio:20805881 ArrayExpress:Q58DA0 Uniprot:Q58DA0
Length = 382
Score = 1029 (367.3 bits), Expect = 6.7e-104, P = 6.7e-104
Identities = 212/358 (59%), Positives = 247/358 (68%)
Query: 1 MVLESTMICVDNSDFMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLAMADSVEV 60
MVLESTM+CVDNS++MRNGDFLPTRLQAQQDAVN+VCHSKTRSNPENNVGL+ +A+ EV
Sbjct: 1 MVLESTMVCVDNSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITLANDCEV 60
Query: 61 LATLTSDVGRILSKLHQVQPNGNINFMTGIRIAHLALKHRQGKNHKMRIIAFVGSPVDLE 120
L TLT D GRILSKLH VQP G I F TGIR+AHLALKHRQGKNHKMRIIAFVGSPV+
Sbjct: 61 LTTLTPDTGRILSKLHTVQPKGKITFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPVEDN 120
Query: 121 ERELTKLAKRLKKEKVNVDIVSFGEEVVNTELLNTFISTLNGKDGSGSHMVTVAVGPHLS 180
E++L KLAKRLKKEKVNVDI++FGEE VNTE L F++TLNGKDG+GSH+VTV GP L+
Sbjct: 121 EKDLVKLAKRLKKEKVNVDIINFGEEEVNTEKLTAFVNTLNGKDGTGSHLVTVPPGPSLA 180
Query: 181 DALISSPIIQGEDGAG-GAPGSSYEFGVDPNEDPELALALRVSMXXXXXXXXXXXXXXXX 239
DALISSPI+ GE GA G S +EFGVDP+ DPELALALRVSM
Sbjct: 181 DALISSPILAGEGGAMLGLGASDFEFGVDPSADPELALALRVSMEEQRQRQEEEARRAAA 240
Query: 240 XXXXXXXXXXXXVPKPTAEAKDAPGDMATAAHPVG--GQPDFATMTEEEQIAFAMQMSMQ 297
T ++ DA M + G G PD ++MTEEEQIA+AMQMS+Q
Sbjct: 241 ASAAEAGIATAG----TEDSDDALLKMTISQQEFGRTGLPDLSSMTEEEQIAYAMQMSLQ 296
Query: 298 DTQXXXXXXXXXXXXXXXXXXXXXXXMDTDEMVNDAAFLQSVLENLPGVDPQSAEVRH 355
+ D +++ D FLQSVLENLPGVDP + +R+
Sbjct: 297 GAEFGQAESADMDASSAMDTSEPTKEEDDYDVMQDPEFLQSVLENLPGVDPNNEAIRN 354
>UNIPROTKB|P55036 [details] [associations]
symbol:PSMD4 "26S proteasome non-ATPase regulatory subunit
4" species:9606 "Homo sapiens" [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR002035 InterPro:IPR027040
PROSITE:PS50234 SMART:SM00327 Pfam:PF02809 GO:GO:0005829
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0044281 GO:GO:0000082
GO:GO:0051436 KO:K03029 InterPro:IPR003903 SMART:SM00726
PROSITE:PS50330 GO:GO:0000216 GO:GO:0000209 GO:GO:0000084
EMBL:CH471121 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 EMBL:AL592424 EMBL:AL391069 eggNOG:COG5148
OrthoDB:EOG4JQ3Z0 GO:GO:0022624 HOGENOM:HOG000165630
PANTHER:PTHR10223 CTD:5710 HOVERGEN:HBG000425 EMBL:U51007
EMBL:U24704 EMBL:AB033605 EMBL:BC002365 EMBL:BC072008 EMBL:U72664
IPI:IPI00022694 IPI:IPI00216247 PIR:S63671 RefSeq:NP_002801.1
UniGene:Hs.505059 PDB:1P9C PDB:1P9D PDB:1UEL PDB:1YX4 PDB:1YX5
PDB:1YX6 PDB:2KDE PDB:2KDF PDBsum:1P9C PDBsum:1P9D PDBsum:1UEL
PDBsum:1YX4 PDBsum:1YX5 PDBsum:1YX6 PDBsum:2KDE PDBsum:2KDF
ProteinModelPortal:P55036 SMR:P55036 IntAct:P55036 MINT:MINT-105366
STRING:P55036 PhosphoSite:P55036 DMDM:1709796 PaxDb:P55036
PRIDE:P55036 DNASU:5710 Ensembl:ENST00000368884 GeneID:5710
KEGG:hsa:5710 UCSC:uc001exl.3 GeneCards:GC01P151227 HGNC:HGNC:9561
HPA:CAB047300 HPA:HPA039252 MIM:601648 neXtProt:NX_P55036
PharmGKB:PA33907 PhylomeDB:P55036 ChiTaRS:PSMD4
EvolutionaryTrace:P55036 GenomeRNAi:5710 NextBio:22186
ArrayExpress:P55036 Bgee:P55036 CleanEx:HS_PSMD4
Genevestigator:P55036 GermOnline:ENSG00000159352 Uniprot:P55036
Length = 377
Score = 1029 (367.3 bits), Expect = 6.7e-104, P = 6.7e-104
Identities = 212/358 (59%), Positives = 247/358 (68%)
Query: 1 MVLESTMICVDNSDFMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLAMADSVEV 60
MVLESTM+CVDNS++MRNGDFLPTRLQAQQDAVN+VCHSKTRSNPENNVGL+ +A+ EV
Sbjct: 1 MVLESTMVCVDNSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITLANDCEV 60
Query: 61 LATLTSDVGRILSKLHQVQPNGNINFMTGIRIAHLALKHRQGKNHKMRIIAFVGSPVDLE 120
L TLT D GRILSKLH VQP G I F TGIR+AHLALKHRQGKNHKMRIIAFVGSPV+
Sbjct: 61 LTTLTPDTGRILSKLHTVQPKGKITFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPVEDN 120
Query: 121 ERELTKLAKRLKKEKVNVDIVSFGEEVVNTELLNTFISTLNGKDGSGSHMVTVAVGPHLS 180
E++L KLAKRLKKEKVNVDI++FGEE VNTE L F++TLNGKDG+GSH+VTV GP L+
Sbjct: 121 EKDLVKLAKRLKKEKVNVDIINFGEEEVNTEKLTAFVNTLNGKDGTGSHLVTVPPGPSLA 180
Query: 181 DALISSPIIQGEDGAG-GAPGSSYEFGVDPNEDPELALALRVSMXXXXXXXXXXXXXXXX 239
DALISSPI+ GE GA G S +EFGVDP+ DPELALALRVSM
Sbjct: 181 DALISSPILAGEGGAMLGLGASDFEFGVDPSADPELALALRVSMEEQRQRQEEEARRAAA 240
Query: 240 XXXXXXXXXXXXVPKPTAEAKDAPGDMATAAHPVG--GQPDFATMTEEEQIAFAMQMSMQ 297
T ++ DA M + G G PD ++MTEEEQIA+AMQMS+Q
Sbjct: 241 ASAAEAGIATTG----TEDSDDALLKMTISQQEFGRTGLPDLSSMTEEEQIAYAMQMSLQ 296
Query: 298 DTQXXXXXXXXXXXXXXXXXXXXXXXMDTDEMVNDAAFLQSVLENLPGVDPQSAEVRH 355
+ D +++ D FLQSVLENLPGVDP + +R+
Sbjct: 297 GAEFGQAESADIDASSAMDTSEPAKEEDDYDVMQDPEFLQSVLENLPGVDPNNEAIRN 354
>UNIPROTKB|Q5VWC4 [details] [associations]
symbol:PSMD4 "26S proteasome non-ATPase regulatory subunit
4" species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IEA]
InterPro:IPR002035 InterPro:IPR027040 PROSITE:PS50234 SMART:SM00327
Pfam:PF02809 GO:GO:0000502 InterPro:IPR003903 SMART:SM00726
PROSITE:PS50330 EMBL:CH471121 EMBL:AL592424 EMBL:AL391069
OrthoDB:EOG4JQ3Z0 HOGENOM:HOG000165630 OMA:SDYQRNG
PANTHER:PTHR10223 HOVERGEN:HBG000425 IPI:IPI00216247
UniGene:Hs.505059 HGNC:HGNC:9561 ChiTaRS:PSMD4 SMR:Q5VWC4
STRING:Q5VWC4 Ensembl:ENST00000368881 Uniprot:Q5VWC4
Length = 380
Score = 1028 (366.9 bits), Expect = 8.6e-104, P = 8.6e-104
Identities = 211/358 (58%), Positives = 247/358 (68%)
Query: 1 MVLESTMICVDNSDFMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLAMADSVEV 60
MVLESTM+CVDNS++MRNGDFLPTRLQAQQDAVN+VCHSKTRSNPENNVGL+ +A+ EV
Sbjct: 1 MVLESTMVCVDNSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITLANDCEV 60
Query: 61 LATLTSDVGRILSKLHQVQPNGNINFMTGIRIAHLALKHRQGKNHKMRIIAFVGSPVDLE 120
L TLT D GRILSKLH VQP G I F TGIR+AHLALKHRQGKNHKMRIIAFVGSPV+
Sbjct: 61 LTTLTPDTGRILSKLHTVQPKGKITFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPVEDN 120
Query: 121 ERELTKLAKRLKKEKVNVDIVSFGEEVVNTELLNTFISTLNGKDGSGSHMVTVAVGPHLS 180
E++L KLAKRLKKEKVNVDI++FGEE VNTE L F++TLNGKDG+GSH+VTV GP L+
Sbjct: 121 EKDLVKLAKRLKKEKVNVDIINFGEEEVNTEKLTAFVNTLNGKDGTGSHLVTVPPGPSLA 180
Query: 181 DALISSPIIQGEDGAG-GAPGSSYEFGVDPNEDPELALALRVSMXXXXXXXXXXXXXXXX 239
DALISSPI+ GE GA G S +EFGVDP+ DPELALALRVSM
Sbjct: 181 DALISSPILAGEGGAMLGLGASDFEFGVDPSADPELALALRVSMEEQRQRQEEEARRAAA 240
Query: 240 XXXXXXXXXXXXVPKPTAEAKDAPGDMATAAHPVG--GQPDFATMTEEEQIAFAMQMSMQ 297
+ ++ DA M + G G PD ++MTEEEQIA+AMQMS+Q
Sbjct: 241 ASAAEAGIATTGT-EGERDSDDALLKMTISQQEFGRTGLPDLSSMTEEEQIAYAMQMSLQ 299
Query: 298 DTQXXXXXXXXXXXXXXXXXXXXXXXMDTDEMVNDAAFLQSVLENLPGVDPQSAEVRH 355
+ D +++ D FLQSVLENLPGVDP + +R+
Sbjct: 300 GAEFGQAESADIDASSAMDTSEPAKEEDDYDVMQDPEFLQSVLENLPGVDPNNEAIRN 357
>UNIPROTKB|Q32YV9 [details] [associations]
symbol:PSMD4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] InterPro:IPR002035
InterPro:IPR027040 PROSITE:PS50234 SMART:SM00327 Pfam:PF02809
GO:GO:0000502 KO:K03029 InterPro:IPR003903 SMART:SM00726
PROSITE:PS50330 HOGENOM:HOG000165630 OMA:SDYQRNG PANTHER:PTHR10223
CTD:5710 GeneTree:ENSGT00530000064050 HOVERGEN:HBG000425
EMBL:CU138569 EMBL:AY704418 RefSeq:NP_001038000.1 UniGene:Ssc.49786
SMR:Q32YV9 STRING:Q32YV9 Ensembl:ENSSSCT00000007264 GeneID:733583
KEGG:ssc:733583 Uniprot:Q32YV9
Length = 377
Score = 1028 (366.9 bits), Expect = 8.6e-104, P = 8.6e-104
Identities = 212/358 (59%), Positives = 247/358 (68%)
Query: 1 MVLESTMICVDNSDFMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLAMADSVEV 60
MVLESTM+CVDNS++MRNGDFLPTRLQAQQDAVN+VCHSKTRSNPENNVGL+ +A+ EV
Sbjct: 1 MVLESTMVCVDNSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITLANDCEV 60
Query: 61 LATLTSDVGRILSKLHQVQPNGNINFMTGIRIAHLALKHRQGKNHKMRIIAFVGSPVDLE 120
L TLT D GRILSKLH VQP G I F TGIR+AHLALKHRQGKNHKMRIIAFVGSPV+
Sbjct: 61 LTTLTPDTGRILSKLHTVQPKGKITFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPVEDN 120
Query: 121 ERELTKLAKRLKKEKVNVDIVSFGEEVVNTELLNTFISTLNGKDGSGSHMVTVAVGPHLS 180
E++L KLAKRLKKEKVNVDI++FGEE VNTE L F++TLNGKDG+GSH+VTV GP L+
Sbjct: 121 EKDLVKLAKRLKKEKVNVDIINFGEEEVNTEKLTAFVNTLNGKDGTGSHLVTVPPGPSLA 180
Query: 181 DALISSPIIQGEDGAG-GAPGSSYEFGVDPNEDPELALALRVSMXXXXXXXXXXXXXXXX 239
DALISSPI+ GE GA G S +EFGVDP+ DPELALALRVSM
Sbjct: 181 DALISSPILAGEGGAMLGLGASDFEFGVDPSADPELALALRVSMEEQRQRQEEEARRAAA 240
Query: 240 XXXXXXXXXXXXVPKPTAEAKDAPGDMATAAHPVG--GQPDFATMTEEEQIAFAMQMSMQ 297
T ++ DA M + G G PD ++MTEEEQIA+AMQMS+Q
Sbjct: 241 ASAAEAGIATTG----TEDSDDALLKMTISQQEFGRTGLPDLSSMTEEEQIAYAMQMSLQ 296
Query: 298 DTQXXXXXXXXXXXXXXXXXXXXXXXMDTDEMVNDAAFLQSVLENLPGVDPQSAEVRH 355
+ D +++ D FLQSVLENLPGVDP + +R+
Sbjct: 297 GAEFGQAESADIDANSAMDTSEPAKEEDDYDVMQDPEFLQSVLENLPGVDPNNEAIRN 354
>RGD|621109 [details] [associations]
symbol:Psmd4 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 4" species:10116 "Rattus norvegicus" [GO:0005737
"cytoplasm" evidence=IDA] [GO:0022624 "proteasome accessory
complex" evidence=ISO] [GO:0042044 "fluid transport" evidence=NAS]
InterPro:IPR002035 InterPro:IPR027040 PROSITE:PS50234 SMART:SM00327
Pfam:PF02809 RGD:621109 GO:GO:0005737 GO:GO:0000502
InterPro:IPR003903 SMART:SM00726 PROSITE:PS50330 PANTHER:PTHR10223
HOVERGEN:HBG000425 GO:GO:0042044 IPI:IPI00208471 UniGene:Rn.3830
HSSP:P55036 EMBL:AF175575 EMBL:BC060559 SMR:Q9ESH1 IntAct:Q9ESH1
STRING:Q9ESH1 UCSC:RGD:621109 InParanoid:Q9ESH1
Genevestigator:Q9ESH1 Uniprot:Q9ESH1
Length = 377
Score = 1026 (366.2 bits), Expect = 1.4e-103, P = 1.4e-103
Identities = 213/358 (59%), Positives = 248/358 (69%)
Query: 1 MVLESTMICVDNSDFMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLAMADSVEV 60
MVLESTM+CVDNS++MRNGDFLPTRLQAQQDAVN+VCHSKTRSNPENNVGL+ +A+ EV
Sbjct: 1 MVLESTMVCVDNSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITLANDCEV 60
Query: 61 LATLTSDVGRILSKLHQVQPNGNINFMTGIRIAHLALKHRQGKNHKMRIIAFVGSPVDLE 120
L TLT D GRILSKLH VQP G I F TGIR+AHLALKHRQGKNHKMRIIAFVGSPV+
Sbjct: 61 LTTLTPDTGRILSKLHTVQPKGKITFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPVEDN 120
Query: 121 ERELTKLAKRLKKEKVNVDIVSFGEEVVNTELLNTFISTLNGKDGSGSHMVTVAVGPHLS 180
E++L KLAKRLKKEKVNVDI++FGEE VNTE L F++TLNGKDG+GSH+VTV GP L+
Sbjct: 121 EKDLVKLAKRLKKEKVNVDIINFGEEEVNTEKLTAFVNTLNGKDGTGSHLVTVPPGPSLA 180
Query: 181 DALISSPIIQGEDGAG-GAPGSSYEFGVDPNEDPELALALRVSMXXXXXXXXXXXXXXXX 239
DALISSPI+ GE GA G S +EFGVDP+ DPELALALRVSM
Sbjct: 181 DALISSPILAGEGGAMLGLGASDFEFGVDPSADPELALALRVSMEEQRQRQEEEARRAAA 240
Query: 240 XXXXXXXXXXXXVPKPTAEAKDAPGDMATAAHPVG--GQPDFATMTEEEQIAFAMQMSMQ 297
P T ++ DA M + G G PD ++MTEEEQIA+AMQMS+Q
Sbjct: 241 ASAAEAGIAT---PG-TEDSDDALLKMTISQQEFGRAGLPDLSSMTEEEQIAYAMQMSLQ 296
Query: 298 DTQXXXXXXXXXXXXXXXXXXXXXXXMDTDEMVNDAAFLQSVLENLPGVDPQSAEVRH 355
+ D +++ D FLQSVLENLPGVDP + +R+
Sbjct: 297 GAEFGQAESGDIDASSAMDTSEPVKEEDDYDVMQDPEFLQSVLENLPGVDPNNEAIRN 354
>UNIPROTKB|F1PRW0 [details] [associations]
symbol:PSMD4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] InterPro:IPR002035
InterPro:IPR027040 PROSITE:PS50234 SMART:SM00327 Pfam:PF02809
KO:K03029 InterPro:IPR003903 SMART:SM00726 PROSITE:PS50330
OMA:SDYQRNG PANTHER:PTHR10223 CTD:5710 GeneTree:ENSGT00530000064050
EMBL:AAEX03011056 RefSeq:NP_001130036.1 Ensembl:ENSCAFT00000019980
GeneID:100192385 KEGG:cfa:100192385 Uniprot:F1PRW0
Length = 377
Score = 1024 (365.5 bits), Expect = 2.3e-103, P = 2.3e-103
Identities = 211/358 (58%), Positives = 246/358 (68%)
Query: 1 MVLESTMICVDNSDFMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLAMADSVEV 60
MVLESTM+CVDNS++MRNGDFLPTRLQAQQDAVN+VCHSKTRSNPENNVGL+ +A+ EV
Sbjct: 1 MVLESTMVCVDNSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITLANDCEV 60
Query: 61 LATLTSDVGRILSKLHQVQPNGNINFMTGIRIAHLALKHRQGKNHKMRIIAFVGSPVDLE 120
L TLT D GRILSKLH VQP G I F TGIR+AHLALKHRQGKNHKMRIIAFVGSPV+
Sbjct: 61 LTTLTPDTGRILSKLHTVQPKGKITFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPVEDN 120
Query: 121 ERELTKLAKRLKKEKVNVDIVSFGEEVVNTELLNTFISTLNGKDGSGSHMVTVAVGPHLS 180
E++L KLAKRLKKEKVNVDI++FGEE VNTE L F++TLNGKDG+GSH+VTV GP L+
Sbjct: 121 EKDLVKLAKRLKKEKVNVDIINFGEEEVNTEKLTAFVNTLNGKDGTGSHLVTVPPGPSLA 180
Query: 181 DALISSPIIQGEDGAG-GAPGSSYEFGVDPNEDPELALALRVSMXXXXXXXXXXXXXXXX 239
DALISSPI+ GE GA G S +EFGVDP+ DPELALALRVSM
Sbjct: 181 DALISSPILAGEGGAMLGLGASDFEFGVDPSADPELALALRVSMEEQRQRQEEEARRAAA 240
Query: 240 XXXXXXXXXXXXVPKPTAEAKDAPGDMATAAHPVG--GQPDFATMTEEEQIAFAMQMSMQ 297
++ DA M + G G PD ++MTEEEQIA+AMQMS+Q
Sbjct: 241 ASAAEAGIATAGAE----DSDDALLKMTISQQEFGRSGLPDLSSMTEEEQIAYAMQMSLQ 296
Query: 298 DTQXXXXXXXXXXXXXXXXXXXXXXXMDTDEMVNDAAFLQSVLENLPGVDPQSAEVRH 355
+ D +++ D FLQSVLENLPGVDP + +R+
Sbjct: 297 GAEFGQAESADIDASSAMDTSEPAKEEDDYDVMQDPEFLQSVLENLPGVDPNNEAIRN 354
>UNIPROTKB|O88321 [details] [associations]
symbol:Psmd4 "Proteasome (Prosome, macropain) 26S subunit,
non-ATPase, 4, isoform CRA_a" species:10116 "Rattus norvegicus"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IEA] InterPro:IPR002035 InterPro:IPR027040
PROSITE:PS50234 SMART:SM00327 Pfam:PF02809 RGD:621109 GO:GO:0000502
KO:K03029 InterPro:IPR003903 SMART:SM00726 PROSITE:PS50330
EMBL:CH474015 eggNOG:COG5148 OrthoDB:EOG4JQ3Z0 HOGENOM:HOG000165630
OMA:SDYQRNG PANTHER:PTHR10223 CTD:5710 GeneTree:ENSGT00530000064050
HOVERGEN:HBG000425 EMBL:AC130969 EMBL:AB017188 IPI:IPI00208471
RefSeq:NP_112621.1 UniGene:Rn.3830 HSSP:P55036 SMR:O88321
IntAct:O88321 STRING:O88321 Ensembl:ENSRNOT00000028589 GeneID:83499
KEGG:rno:83499 InParanoid:O88321 NextBio:615908
Genevestigator:O88321 Uniprot:O88321
Length = 380
Score = 1024 (365.5 bits), Expect = 2.3e-103, P = 2.3e-103
Identities = 211/358 (58%), Positives = 247/358 (68%)
Query: 1 MVLESTMICVDNSDFMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLAMADSVEV 60
MVLESTM+CVDNS++MRNGDFLPTRLQAQQDAVN+VCHSKTRSNPENNVGL+ +A+ EV
Sbjct: 1 MVLESTMVCVDNSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITLANDCEV 60
Query: 61 LATLTSDVGRILSKLHQVQPNGNINFMTGIRIAHLALKHRQGKNHKMRIIAFVGSPVDLE 120
L TLT D GRILSKLH VQP G I F TGIR+AHLALKHRQGKNHKMRIIAFVGSPV+
Sbjct: 61 LTTLTPDTGRILSKLHTVQPKGKITFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPVEDN 120
Query: 121 ERELTKLAKRLKKEKVNVDIVSFGEEVVNTELLNTFISTLNGKDGSGSHMVTVAVGPHLS 180
E++L KLAKRLKKEKVNVDI++FGEE VNTE L F++TLNGKDG+GSH+VTV GP L+
Sbjct: 121 EKDLVKLAKRLKKEKVNVDIINFGEEEVNTEKLTAFVNTLNGKDGTGSHLVTVPPGPSLA 180
Query: 181 DALISSPIIQGEDGAG-GAPGSSYEFGVDPNEDPELALALRVSMXXXXXXXXXXXXXXXX 239
DALISSPI+ GE GA G S +EFGVDP+ DPELALALRVSM
Sbjct: 181 DALISSPILAGEGGAMLGLGASDFEFGVDPSADPELALALRVSMEEQRQRQEEEARRAAA 240
Query: 240 XXXXXXXXXXXXVPKPTAEAKDAPGDMATAAHPVG--GQPDFATMTEEEQIAFAMQMSMQ 297
+ ++ DA M + G G PD ++MTEEEQIA+AMQMS+Q
Sbjct: 241 ASAAEAGIATPGT-EGERDSDDALLKMTISQQEFGRAGLPDLSSMTEEEQIAYAMQMSLQ 299
Query: 298 DTQXXXXXXXXXXXXXXXXXXXXXXXMDTDEMVNDAAFLQSVLENLPGVDPQSAEVRH 355
+ D +++ D FLQSVLENLPGVDP + +R+
Sbjct: 300 GAEFGQAESGDIDASSAMDTSEPVKEEDDYDVMQDPEFLQSVLENLPGVDPNNEAIRN 357
>FB|FBgn0015283 [details] [associations]
symbol:Rpn10 "Regulatory particle non-ATPase 10" species:7227
"Drosophila melanogaster" [GO:0004175 "endopeptidase activity"
evidence=IDA;NAS] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS;NAS] [GO:0000502 "proteasome complex"
evidence=NAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA;NAS] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0007059 "chromosome segregation"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR002035 InterPro:IPR027040 PROSITE:PS50234
SMART:SM00327 Pfam:PF02809 GO:GO:0007059 EMBL:AE014296
GO:GO:0006508 GO:GO:0006974 GO:GO:0004175 KO:K03029
InterPro:IPR003903 SMART:SM00726 PROSITE:PS50330 eggNOG:COG5148
GO:GO:0008540 BRENDA:3.4.25.1 OMA:SDYQRNG PANTHER:PTHR10223
GeneTree:ENSGT00530000064050 EMBL:S79502 EMBL:AY089333 PIR:S66528
RefSeq:NP_524204.1 ProteinModelPortal:P55035 SMR:P55035
DIP:DIP-22777N IntAct:P55035 MINT:MINT-1578442 STRING:P55035
PaxDb:P55035 EnsemblMetazoa:FBtr0078368 EnsemblMetazoa:FBtr0333453
GeneID:40388 KEGG:dme:Dmel_CG7619 CTD:40388 FlyBase:FBgn0015283
InParanoid:P55035 OrthoDB:EOG43R239 PhylomeDB:P55035
GenomeRNAi:40388 NextBio:818530 Bgee:P55035 GermOnline:CG7619
Uniprot:P55035
Length = 396
Score = 839 (300.4 bits), Expect = 2.0e-102, Sum P(2) = 2.0e-102
Identities = 164/225 (72%), Positives = 188/225 (83%)
Query: 1 MVLESTMICVDNSDFMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLAMADSVEV 60
MVLESTMIC DNSDF RNGD+ PTRL Q+D +NLVC +K RSNPENNVGL+ ++++VEV
Sbjct: 1 MVLESTMICFDNSDFQRNGDYFPTRLIVQRDGINLVCLTKLRSNPENNVGLMTLSNTVEV 60
Query: 61 LATLTSDVGRILSKLHQVQPNGNINFMTGIRIAHLALKHRQGKNHKMRIIAFVGSPVDLE 120
LATLTSD GRI SK+H VQP G IN +TGIRIAHL LKHRQGKNHKMRI+ FVGSP++ E
Sbjct: 61 LATLTSDAGRIFSKMHLVQPKGEINLLTGIRIAHLVLKHRQGKNHKMRIVVFVGSPINHE 120
Query: 121 ERELTKLAKRLKKEKVNVDIVSFGEEVVNTELLNTFISTLNGKDGSGSHMVTVAVGPHLS 180
E +L K AKRLKKEKVNVDIVSFG+ N E+L FI+ LNGKDG+GSH+V+V G LS
Sbjct: 121 EGDLVKQAKRLKKEKVNVDIVSFGDHGNNNEILTAFINALNGKDGTGSHLVSVPRGSVLS 180
Query: 181 DALISSPIIQGEDGAGGAP--GSSYEFGVDPNEDPELALALRVSM 223
DAL+SSPIIQGEDG GGA G+ +EFGVDPNEDPELALALRVSM
Sbjct: 181 DALLSSPIIQGEDGMGGAGLGGNVFEFGVDPNEDPELALALRVSM 225
Score = 196 (74.1 bits), Expect = 2.0e-102, Sum P(2) = 2.0e-102
Identities = 44/83 (53%), Positives = 46/83 (55%)
Query: 272 PVGGQPDFATMTEEEQIAFAMQMSMQDTQXXXXXXXXXXXXXXXXXXXXXXXMDTDEMVN 331
P PDFA MTEEEQIAFAMQMSMQD D E++
Sbjct: 292 PEDNLPDFANMTEEEQIAFAMQMSMQDAPDDSVTQQAKRPKTDEANAPMDVDEDYSEVIG 351
Query: 332 DAAFLQSVLENLPGVDPQSAEVR 354
D AFLQSVLENLPGVDPQS VR
Sbjct: 352 DPAFLQSVLENLPGVDPQSEAVR 374
>ZFIN|ZDB-GENE-050417-96 [details] [associations]
symbol:psmd4b "proteasome (prosome, macropain) 26S
subunit, non-ATPase, 4b" species:7955 "Danio rerio" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR002035 InterPro:IPR027040 PROSITE:PS50234 SMART:SM00327
Pfam:PF02809 ZFIN:ZDB-GENE-050417-96 GO:GO:0000502 KO:K03029
InterPro:IPR003903 SMART:SM00726 PROSITE:PS50330 eggNOG:COG5148
HOGENOM:HOG000165630 OMA:SDYQRNG PANTHER:PTHR10223
GeneTree:ENSGT00530000064050 HOVERGEN:HBG000425 EMBL:CU104697
EMBL:BC092825 IPI:IPI00495802 RefSeq:NP_001017624.1
UniGene:Dr.45739 SMR:Q561Y1 STRING:Q561Y1
Ensembl:ENSDART00000020654 GeneID:550287 KEGG:dre:550287 CTD:550287
InParanoid:Q561Y1 NextBio:20879548 Uniprot:Q561Y1
Length = 372
Score = 1007 (359.5 bits), Expect = 1.4e-101, P = 1.4e-101
Identities = 211/358 (58%), Positives = 254/358 (70%)
Query: 1 MVLESTMICVDNSDFMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLAMADSVEV 60
MVLESTM+CVDNS++MRNGDFLPTRLQAQQDAVN++CHSKTRSNPENNVGL+ MA++ EV
Sbjct: 1 MVLESTMVCVDNSEYMRNGDFLPTRLQAQQDAVNIICHSKTRSNPENNVGLITMANNCEV 60
Query: 61 LATLTSDVGRILSKLHQVQPNGNINFMTGIRIAHLALKHRQGKNHKMRIIAFVGSPVDLE 120
L TLT D GRILSKLH VQP G I+F TGIR+AHLALKHRQGKNHKMRIIAFVGSPV+ +
Sbjct: 61 LTTLTPDTGRILSKLHAVQPRGVISFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPVEDQ 120
Query: 121 ERELTKLAKRLKKEKVNVDIVSFGEEVVNTELLNTFISTLNGKDGSGSHMVTVAVGPHLS 180
E++L K+AKRLKKEKV+VDI++FGEE VNTE L F++TLNGK+G GSH+VTV GP L+
Sbjct: 121 EKDLVKMAKRLKKEKVSVDIINFGEEEVNTEKLTVFVNTLNGKEGVGSHLVTVPPGPSLA 180
Query: 181 DALISSPIIQGEDGA-GGAPGSSYEFGVDPNEDPELALALRVSMXXXXXXXXXXXXXXXX 239
DAL+SSPI+ GE G G S +EFGVDP+ DPELALALRVSM
Sbjct: 181 DALLSSPIMAGEGGTIMGLGASDFEFGVDPSADPELALALRVSMEEQRQRQEEEARRAAV 240
Query: 240 XXXXXXXXXXXXVPKPTA-EAKDAPGDMATAAHPVGGQPDFATMTEEEQIAFAMQMSMQD 298
V PTA E+++A M+TA P PDF+ MTE+EQIA+A+QMSMQ
Sbjct: 241 ASAADAG-----VSSPTADESENALLKMSTA--PA--LPDFSRMTEDEQIAYALQMSMQG 291
Query: 299 TQXXXXXXXXXXXXXXXXXXXXXXXMDTD-EMVNDAAFLQSVLENLPGVDPQSAEVRH 355
+ + D +++ D FLQSVLENLPGVDP + +R+
Sbjct: 292 GEFGGSEAMDVDTAAAAAESEAPKEDEEDYDVMQDPEFLQSVLENLPGVDPNNEAIRN 349
>ZFIN|ZDB-GENE-040625-104 [details] [associations]
symbol:psmd4a "proteasome (prosome, macropain) 26S
subunit, non-ATPase, 4a" species:7955 "Danio rerio" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] InterPro:IPR002035 InterPro:IPR027040 PROSITE:PS50234
SMART:SM00327 Pfam:PF02809 ZFIN:ZDB-GENE-040625-104 KO:K03029
InterPro:IPR003903 SMART:SM00726 PROSITE:PS50330
HOGENOM:HOG000165630 PANTHER:PTHR10223 GeneTree:ENSGT00530000064050
HOVERGEN:HBG000425 EMBL:CU855694 EMBL:BC071482 IPI:IPI00501777
RefSeq:NP_001002112.1 UniGene:Dr.77193 SMR:Q6IQC6 STRING:Q6IQC6
Ensembl:ENSDART00000104063 GeneID:415202 KEGG:dre:415202 CTD:415202
InParanoid:Q6IQC6 NextBio:20818871 Uniprot:Q6IQC6
Length = 372
Score = 990 (353.6 bits), Expect = 9.1e-100, P = 9.1e-100
Identities = 208/360 (57%), Positives = 253/360 (70%)
Query: 1 MVLESTMICVDNSDFMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLAMADSVEV 60
MVLESTM+CVDNS++MRNGDFLPTRLQAQQDAVN+VCHSKTRSNPENNVGL+ MA++ EV
Sbjct: 1 MVLESTMVCVDNSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITMANNCEV 60
Query: 61 LATLTSDVGRILSKLHQVQPNGNINFMTGIRIAHLALKHRQGKNHKMRIIAFVGSPVDLE 120
L TLT D GRILSKLH VQP G I+F TGIR+AHLALKHRQGKNHKMRI+AFVGSPV+
Sbjct: 61 LTTLTPDTGRILSKLHAVQPLGKISFCTGIRVAHLALKHRQGKNHKMRIVAFVGSPVEDN 120
Query: 121 ERELTKLAKRLKKEKVNVDIVSFGEEVVNTELLNTFISTLNGKDGSGSHMVTVAVGPHLS 180
E++L K+AKRLKKEKVNVDI++FGEE +NTE L F++TLNGK+G+GSH+VTV GP L+
Sbjct: 121 EKDLVKMAKRLKKEKVNVDIINFGEEEMNTEKLTAFVNTLNGKEGTGSHLVTVPPGPSLA 180
Query: 181 DALISSPIIQGEDGAG-GAPGSSYEFGVDPNEDPELALALRVSMXXXXXXXXXXXXXXXX 239
DAL+SSPI+ GE G G S +EFGVDP+ DPELALALRVSM
Sbjct: 181 DALLSSPILAGEGGTMIGLGASDFEFGVDPSADPELALALRVSMEEQRQRQEEEARRAAV 240
Query: 240 XXXXXXXXXXXXVPKPTA-EAKDAPGDMATAAHPVGGQ---PDFATMTEEEQIAFAMQMS 295
+P + E+++A M+ A+ P G PDF++MTEEEQIA+AMQMS
Sbjct: 241 QSAAEAG-----IPTTASDESEEALLKMS-ASQPESGVAALPDFSSMTEEEQIAYAMQMS 294
Query: 296 MQDTQXXXXXXXXXXXXXXXXXXXXXXXMDTDEMVNDAAFLQSVLENLPGVDPQSAEVRH 355
+ + D +++ D FLQSVLENLPGVDP + +R+
Sbjct: 295 LAGGEFGESMDTGAPIDTAESKEE-----DDYDVMQDPEFLQSVLENLPGVDPNNEAIRN 349
>UNIPROTKB|Q58D01 [details] [associations]
symbol:PSMD4 "26S proteasome non-ATPase regulatory subunit
4" species:9913 "Bos taurus" [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR002035 InterPro:IPR027040 PROSITE:PS50234 SMART:SM00327
Pfam:PF02809 GO:GO:0000502 InterPro:IPR003903 SMART:SM00726
PROSITE:PS50330 HOGENOM:HOG000165630 PANTHER:PTHR10223
UniGene:Bt.104130 UniGene:Bt.12570 GeneTree:ENSGT00530000064050
HOVERGEN:HBG000425 EMBL:DAAA02007252 EMBL:BT021796 IPI:IPI00841753
SMR:Q58D01 STRING:Q58D01 Ensembl:ENSBTAT00000046341 Uniprot:Q58D01
Length = 316
Score = 955 (341.2 bits), Expect = 4.7e-96, P = 4.7e-96
Identities = 195/303 (64%), Positives = 224/303 (73%)
Query: 1 MVLESTMICVDNSDFMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLAMADSVEV 60
MVLESTM+CVDNS++MRNGDFLPTRLQAQQDAVN+VCHSKTRSNPENNVGL+ +A+ EV
Sbjct: 1 MVLESTMVCVDNSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITLANDCEV 60
Query: 61 LATLTSDVGRILSKLHQVQPNGNINFMTGIRIAHLALKHRQGKNHKMRIIAFVGSPVDLE 120
L TLT D GRILSKLH VQP G I F TGIR+AHLALKHRQGKNHKMRIIAFVGSPV+
Sbjct: 61 LTTLTPDTGRILSKLHTVQPKGKITFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPVEDN 120
Query: 121 ERELTKLAKRLKKEKVNVDIVSFGEEVVNTELLNTFISTLNGKDGSGSHMVTVAVGPHLS 180
E++L KLAKRLKKEKVNVDI++FGEE VNTE L F++TLNGKDG+GSH+VTV GP L+
Sbjct: 121 EKDLVKLAKRLKKEKVNVDIINFGEEEVNTEKLTAFVNTLNGKDGTGSHLVTVPPGPSLA 180
Query: 181 DALISSPIIQGEDGAG-GAPGSSYEFGVDPNEDPELALALRVSMXXXXXXXXXXXXXXXX 239
DALISSPI+ GE GA G S +EFGVDP+ DPELALALRVSM
Sbjct: 181 DALISSPILAGEGGAMLGLGASDFEFGVDPSADPELALALRVSMEEQRQRQEEEARRAAA 240
Query: 240 XXXXXXXXXXXXVPKPTAEAKDAPGDMATAAHPVG--GQPDFATMTEEEQIAFAMQMSMQ 297
T ++ DA M + G G PD ++MTEEEQIA+AMQMS+Q
Sbjct: 241 ASAAEAGIATAG----TEDSDDALLKMTISQQEFGRTGLPDLSSMTEEEQIAYAMQMSLQ 296
Query: 298 DTQ 300
+
Sbjct: 297 GAE 299
>UNIPROTKB|D4A9C9 [details] [associations]
symbol:Psmd4 "Protein Psmd4" species:10116 "Rattus
norvegicus" [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=IEA] InterPro:IPR002035
InterPro:IPR027040 PROSITE:PS50234 SMART:SM00327 Pfam:PF02809
RGD:621109 InterPro:IPR003903 SMART:SM00726 PROSITE:PS50330
PANTHER:PTHR10223 EMBL:AC130969 IPI:IPI00561561
Ensembl:ENSRNOT00000047862 ArrayExpress:D4A9C9 Uniprot:D4A9C9
Length = 367
Score = 952 (340.2 bits), Expect = 9.7e-96, P = 9.7e-96
Identities = 194/303 (64%), Positives = 224/303 (73%)
Query: 1 MVLESTMICVDNSDFMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLAMADSVEV 60
MVLESTM+CVDNS++MRNGDFLPTRLQAQQDAVN+VCHSKTRSNPENNVGL+ +A+ EV
Sbjct: 1 MVLESTMVCVDNSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITLANDCEV 60
Query: 61 LATLTSDVGRILSKLHQVQPNGNINFMTGIRIAHLALKHRQGKNHKMRIIAFVGSPVDLE 120
L TLT D GRILSKLH VQP G I F TGIR+AHLALKHRQGKNHKMRIIAFVGSPV+
Sbjct: 61 LTTLTPDTGRILSKLHTVQPKGKITFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPVEDN 120
Query: 121 ERELTKLAKRLKKEKVNVDIVSFGEEVVNTELLNTFISTLNGKDGSGSHMVTVAVGPHLS 180
E++L KLAKRLKKEKVNVDI++FGEE VNTE L F++TLNGKDG+GSH+VTV GP L+
Sbjct: 121 EKDLVKLAKRLKKEKVNVDIINFGEEEVNTEKLTAFVNTLNGKDGTGSHLVTVPPGPSLA 180
Query: 181 DALISSPIIQGEDGAG-GAPGSSYEFGVDPNEDPELALALRVSMXXXXXXXXXXXXXXXX 239
DALISSPI+ GE GA G S +EFGVDP+ DPELALALRVSM
Sbjct: 181 DALISSPILAGEGGAMLGLGASDFEFGVDPSADPELALALRVSMEEQRQRQEEEARRAAA 240
Query: 240 XXXXXXXXXXXXVPKPTAEAKDAPGDMATAAHPVG--GQPDFATMTEEEQIAFAMQMSMQ 297
+ ++ DA M + G G PD ++MTEEEQIA+AMQMS+Q
Sbjct: 241 ASAAEAGIATPGT-EGERDSDDALLKMTISQQEFGRAGLPDLSSMTEEEQIAYAMQMSLQ 299
Query: 298 DTQ 300
+
Sbjct: 300 GAE 302
>UNIPROTKB|A2A3N6 [details] [associations]
symbol:PIPSL "Putative PIP5K1A and PSMD4-like protein"
species:9606 "Homo sapiens" [GO:0016307 "phosphatidylinositol
phosphate kinase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR002035 InterPro:IPR002498 Pfam:PF01504
PROSITE:PS50234 PROSITE:PS51455 SMART:SM00327 GO:GO:0005737
PROSITE:PS50330 GO:GO:0046854 InterPro:IPR016034 SMART:SM00330
InterPro:IPR023610 PANTHER:PTHR23086 GO:GO:0016307 eggNOG:COG5148
EMBL:AL365510 IPI:IPI00419692 UniGene:Hs.149255
ProteinModelPortal:A2A3N6 SMR:A2A3N6 STRING:A2A3N6 PaxDb:A2A3N6
PRIDE:A2A3N6 UCSC:uc009xuj.2 GeneCards:GC10M095707 HGNC:HGNC:23733
neXtProt:NX_A2A3N6 InParanoid:A2A3N6 Genevestigator:A2A3N6
Uniprot:A2A3N6
Length = 862
Score = 908 (324.7 bits), Expect = 4.5e-91, P = 4.5e-91
Identities = 192/356 (53%), Positives = 227/356 (63%)
Query: 3 LESTMICVDNSDFMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLAMADSVEVLA 62
L+ VDNS++M NGDFLPTRLQAQQDAVN VCHSKTRSNPENNVGL+ + + EVL
Sbjct: 488 LQMLTTSVDNSEYMGNGDFLPTRLQAQQDAVNTVCHSKTRSNPENNVGLITLDNDCEVLT 547
Query: 63 TLTSDVGRILSKLHQVQPNGNINFMTGIRIAHLALKHRQGKNHKMRIIAFVGSPVDLEER 122
TLT D GRILSKLH VQP G I F GI +AHLALKHRQG NHK+RIIAFVG+PV+ E+
Sbjct: 548 TLTPDTGRILSKLHTVQPKGKITFCMGIHVAHLALKHRQGNNHKIRIIAFVGNPVEDNEK 607
Query: 123 ELTKLAKRLKKEKVNVDIVSFGEEVVNTELLNTFISTLNGKDGSGSHMVTVAVGPHLSDA 182
L KLAK LKKEKVNVDI++FGEE VNTE L F++TLNGKDG+GSH+VTV GP L+DA
Sbjct: 608 NLVKLAKCLKKEKVNVDIINFGEEEVNTEKLTAFVNTLNGKDGTGSHLVTVPPGPSLADA 667
Query: 183 LISSPIIQGEDGAG-GAPGSSYEFGVDPNEDPELALALRVSMXXXXXXXXXXXXXXXXXX 241
LIS PI+ GE GA G S +EFGVDP+ DPELAL LRV M
Sbjct: 668 LISFPILAGEGGAMMGLGASDFEFGVDPSADPELALVLRVFMEEQRQRQEEEARQAAAAS 727
Query: 242 XXXXXXXXXXVPKPTAEAKDAPGDMATAAHPVG--GQPDFATMTEEEQIAFAMQMSMQDT 299
T ++ DA M + G G PD ++MTEEE+I AMQMS+Q
Sbjct: 728 AAEAGIATTG----TEDSDDALLKMTISQQEFGHTGLPDLSSMTEEEKIVCAMQMSLQGA 783
Query: 300 QXXXXXXXXXXXXXXXXXXXXXXXMDTDEMVNDAAFLQSVLENLPGVDPQSAEVRH 355
+ D +++ D FLQSVLENLPGVDP + +R+
Sbjct: 784 EFGLAESADIDASSAMDTSEPAKEEDDYDVMQDPEFLQSVLENLPGVDPNNEAIRN 839
>UNIPROTKB|A6PVX3 [details] [associations]
symbol:PSMD4 "26S proteasome non-ATPase regulatory subunit
4" species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IEA]
InterPro:IPR002035 InterPro:IPR027040 SMART:SM00327 GO:GO:0005737
GO:GO:0000502 EMBL:AL592424 EMBL:AL391069 HOGENOM:HOG000165630
PANTHER:PTHR10223 HOVERGEN:HBG000425 UniGene:Hs.505059
HGNC:HGNC:9561 ChiTaRS:PSMD4 IPI:IPI00853509 STRING:A6PVX3
Ensembl:ENST00000437736 Uniprot:A6PVX3
Length = 203
Score = 795 (284.9 bits), Expect = 4.2e-79, P = 4.2e-79
Identities = 155/203 (76%), Positives = 173/203 (85%)
Query: 16 MRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLAMADSVEVLATLTSDVGRILSKL 75
MRNGDFLPTRLQAQQDAVN+VCHSKTRSNPENNVGL+ +A+ EVL TLT D GRILSKL
Sbjct: 1 MRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITLANDCEVLTTLTPDTGRILSKL 60
Query: 76 HQVQPNGNINFMTGIRIAHLALKHRQGKNHKMRIIAFVGSPVDLEERELTKLAKRLKKEK 135
H VQP G I F TGIR+AHLALKHRQGKNHKMRIIAFVGSPV+ E++L KLAKRLKKEK
Sbjct: 61 HTVQPKGKITFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPVEDNEKDLVKLAKRLKKEK 120
Query: 136 VNVDIVSFGEEVVNTELLNTFISTLNGKDGSGSHMVTVAVGPHLSDALISSPIIQGEDGA 195
VNVDI++FGEE VNTE L F++TLNGKDG+GSH+VTV GP L+DALISSPI+ GE GA
Sbjct: 121 VNVDIINFGEEEVNTEKLTAFVNTLNGKDGTGSHLVTVPPGPSLADALISSPILAGEGGA 180
Query: 196 G-GAPGSSYEFGVDPNEDPELAL 217
G S +EFGVDP+ DPELAL
Sbjct: 181 MLGLGASDFEFGVDPSADPELAL 203
>UNIPROTKB|H9KYX1 [details] [associations]
symbol:H9KYX1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0060326 "cell chemotaxis" evidence=IEA]
[GO:0072661 "protein targeting to plasma membrane" evidence=IEA]
[GO:0097178 "ruffle assembly" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005847 "mRNA cleavage and polyadenylation
specificity factor complex" evidence=IEA] [GO:0008654 "phospholipid
biosynthetic process" evidence=IEA] [GO:0010761 "fibroblast
migration" evidence=IEA] [GO:0016308
"1-phosphatidylinositol-4-phosphate 5-kinase activity"
evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0019900
"kinase binding" evidence=IEA] [GO:0030027 "lamellipodium"
evidence=IEA] [GO:0031532 "actin cytoskeleton reorganization"
evidence=IEA] [GO:0032587 "ruffle membrane" evidence=IEA]
[GO:0032863 "activation of Rac GTPase activity" evidence=IEA]
[GO:0048041 "focal adhesion assembly" evidence=IEA]
InterPro:IPR002035 InterPro:IPR002498 Pfam:PF01504 PROSITE:PS51455
SMART:SM00327 Pfam:PF02809 InterPro:IPR003903 SMART:SM00726
PROSITE:PS50330 GO:GO:0046854 InterPro:IPR016034 SMART:SM00330
InterPro:IPR023610 PANTHER:PTHR23086 GeneTree:ENSGT00690000101870
GO:GO:0016307 EMBL:AADN02010480 EMBL:AADN02010481 EMBL:AADN02010482
EMBL:AADN02010483 Ensembl:ENSGALT00000001176 OMA:MADNCEV
Uniprot:H9KYX1
Length = 866
Score = 775 (277.9 bits), Expect = 5.5e-77, P = 5.5e-77
Identities = 177/351 (50%), Positives = 210/351 (59%)
Query: 12 NSDFMRNGDFLPT--RLQAQQDAVNLVCHSKTRSNPENNV-GLLAMADS-VEVLATLTSD 67
N F G L T LQ + A+N V S+T + + GL+ + S EVL TLT D
Sbjct: 499 NRQFSPMGGILRTVSSLQRLESALNRVPLSRTPQHSREPMRGLITLGHSNCEVLTTLTPD 558
Query: 68 VGRILSKLHQVQPNGNINFMTGIRIAHLALKHRQGKNHKMRIIAFVGSPVDLEERELTKL 127
GRILSKLH VQP G I F TGIR+AHLALKHRQGKNHKMRIIAFVGSPV+ E++L KL
Sbjct: 559 TGRILSKLHTVQPKGKITFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPVEDNEKDLVKL 618
Query: 128 AKRLKKEKVNVDIVSFGEEVVNTELLNTFISTLNGKDGSGSHMVTVAVGPHLSDALISSP 187
AKRLKKEKVNVDI++FGEE NT+ L FI+TLNGKDG+GSH+VTV GP L+DALISSP
Sbjct: 619 AKRLKKEKVNVDIINFGEEEANTDKLTAFINTLNGKDGTGSHLVTVPPGPSLADALISSP 678
Query: 188 IIQGEDGAG-GAPGSSYEFGVDPNEDPELALALRVSMXXXXXXXXXXXXXXXXXXXXXXX 246
I+ GE GA G S +EFGVDP+ DPELALALRVSM
Sbjct: 679 ILAGEGGAMLGLGASDFEFGVDPSADPELALALRVSMEEQRQRQEEEARRAAAASAAEAG 738
Query: 247 XXXXXVPKPTAEAKDAPGDMATAAHPVG--GQPDFATMTEEEQIAFAMQMSMQDTQXXXX 304
++ DA M G G PD + MTEEEQIA+AMQMS+Q +
Sbjct: 739 IAATGGD----DSDDALLKMTITQQEFGRAGLPDLSRMTEEEQIAYAMQMSLQGAEFAQA 794
Query: 305 XXXXXXXXXXXXXXXXXXXMDTDEMVNDAAFLQSVLENLPGVDPQSAEVRH 355
D +++ D FLQSVLENLPGVDP + +R+
Sbjct: 795 EAAEVDSSTAMDTSEPTKEEDDYDVMQDPEFLQSVLENLPGVDPNNEAIRN 845
>UNIPROTKB|H9KYX2 [details] [associations]
symbol:H9KYX2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005847 "mRNA cleavage and polyadenylation
specificity factor complex" evidence=IEA] [GO:0008654 "phospholipid
biosynthetic process" evidence=IEA] [GO:0010761 "fibroblast
migration" evidence=IEA] [GO:0016308
"1-phosphatidylinositol-4-phosphate 5-kinase activity"
evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0019900
"kinase binding" evidence=IEA] [GO:0030027 "lamellipodium"
evidence=IEA] [GO:0031532 "actin cytoskeleton reorganization"
evidence=IEA] [GO:0032587 "ruffle membrane" evidence=IEA]
[GO:0032863 "activation of Rac GTPase activity" evidence=IEA]
[GO:0048041 "focal adhesion assembly" evidence=IEA] [GO:0060326
"cell chemotaxis" evidence=IEA] [GO:0072661 "protein targeting to
plasma membrane" evidence=IEA] [GO:0097178 "ruffle assembly"
evidence=IEA] InterPro:IPR027040 Pfam:PF02809 InterPro:IPR003903
SMART:SM00726 PROSITE:PS50330 GeneTree:ENSGT00690000101870
PANTHER:PTHR10223 EMBL:AADN02010480 EMBL:AADN02010481
EMBL:AADN02010482 EMBL:AADN02010483 Ensembl:ENSGALT00000001187
Uniprot:H9KYX2
Length = 318
Score = 748 (268.4 bits), Expect = 4.0e-74, P = 4.0e-74
Identities = 162/300 (54%), Positives = 188/300 (62%)
Query: 59 EVLATLTSDVGRILSKLHQVQPNGNINFMTGIRIAHLALKHRQGKNHKMRIIAFVGSPVD 118
EVL TLT D GRILSKLH VQP G I F TGIR+AHLALKHRQGKNHKMRIIAFVGSPV+
Sbjct: 3 EVLTTLTPDTGRILSKLHTVQPKGKITFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPVE 62
Query: 119 LEERELTKLAKRLKKEKVNVDIVSFGEEVVNTELLNTFISTLNGKDGSGSHMVTVAVGPH 178
E++L KLAKRLKKEKVNVDI++FGEE NT+ L FI+TLNGKDG+GSH+VTV GP
Sbjct: 63 DNEKDLVKLAKRLKKEKVNVDIINFGEEEANTDKLTAFINTLNGKDGTGSHLVTVPPGPS 122
Query: 179 LSDALISSPIIQGEDGAG-GAPGSSYEFGVDPNEDPELALALRVSMXXXXXXXXXXXXXX 237
L+DALISSPI+ GE GA G S +EFGVDP+ DPELALALRVSM
Sbjct: 123 LADALISSPILAGEGGAMLGLGASDFEFGVDPSADPELALALRVSMEEQRQRQEEEARRA 182
Query: 238 XXXXXXXXXXXXXXVPKPTAEAKDAPGDMATAAHPVG--GQPDFATMTEEEQIAFAMQMS 295
++ DA M G G PD + MTEEEQIA+AMQMS
Sbjct: 183 AAASAAEAGIAATGGD----DSDDALLKMTITQQEFGRAGLPDLSRMTEEEQIAYAMQMS 238
Query: 296 MQDTQXXXXXXXXXXXXXXXXXXXXXXXMDTDEMVNDAAFLQSVLENLPGVDPQSAEVRH 355
+Q + D +++ D FLQSVLENLPGVDP + +R+
Sbjct: 239 LQGAEFAQAEAAEVDSSTAMDTSEPTKEEDDYDVMQDPEFLQSVLENLPGVDPNNEAIRN 298
>WB|WBGene00004466 [details] [associations]
symbol:rpn-10 species:6239 "Caenorhabditis elegans"
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0007283
"spermatogenesis" evidence=IGI;IMP] [GO:0042006 "masculinization of
hermaphroditic germ-line" evidence=IMP] [GO:0008340 "determination
of adult lifespan" evidence=IMP] [GO:0040027 "negative regulation
of vulval development" evidence=IMP] [GO:0016246 "RNA interference"
evidence=IMP] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IGI;IMP] InterPro:IPR002035 InterPro:IPR027040
SMART:SM00327 Pfam:PF02809 GO:GO:0008340 GO:GO:0016246
GO:GO:0007283 GO:GO:0006511 KO:K03029 InterPro:IPR003903
SMART:SM00726 PROSITE:PS50330 GO:GO:0040027 EMBL:FO080112
GO:GO:0042006 eggNOG:COG5148 HOGENOM:HOG000165630 PANTHER:PTHR10223
GeneTree:ENSGT00530000064050 OMA:HRQNKVQ RefSeq:NP_492809.1
ProteinModelPortal:O61742 SMR:O61742 IntAct:O61742 MINT:MINT-210565
STRING:O61742 PaxDb:O61742 EnsemblMetazoa:B0205.3.1
EnsemblMetazoa:B0205.3.2 GeneID:172977 KEGG:cel:CELE_B0205.3
UCSC:B0205.3.1 CTD:172977 WormBase:B0205.3 InParanoid:O61742
NextBio:877763 Uniprot:O61742
Length = 346
Score = 705 (253.2 bits), Expect = 1.4e-69, P = 1.4e-69
Identities = 154/355 (43%), Positives = 218/355 (61%)
Query: 1 MVLESTMICVDNSDFMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLAMADSVEV 60
MV ESTMICVDNS++MRNGDF PTRLQ+QQDAVNLV K R+NPEN VG+L+MA+SV+V
Sbjct: 1 MVQESTMICVDNSEYMRNGDFQPTRLQSQQDAVNLVTQCKLRANPENAVGILSMANSVQV 60
Query: 61 LATLTSDVGRILSKLHQVQPNGNINFMTGIRIAHLALKHRQGKNHKMRIIAFVGSPVD-L 119
L++L+++ GR++ K H ++P G NF+ GI+IAHLALKHRQ +NHKMR++ F+GSP++ +
Sbjct: 61 LSSLSTEQGRLMMKNHSIEPFGKCNFIAGIKIAHLALKHRQNRNHKMRVVLFIGSPLEEI 120
Query: 120 EERELTKLAKRLKKEKVNVDIVSFGE-EVVNTELLNTFISTLNGKDGSGSHMVTVAVGPH 178
E EL K+AK++KKEKV D++ FGE E E +TF+ TLNGK+GSGS ++ V G
Sbjct: 121 EMNELVKIAKKMKKEKVLCDVIMFGENESDGHEKFSTFVDTLNGKEGSGSSLIVVPQGSS 180
Query: 179 LSDALISSPIIQGEDG----AGGAPGSSYEFGVDPNEDPELALALRVSMXXXXXXXXXXX 234
L+DAL+ S + + EDG GG G FG+D DP+LALALRVSM
Sbjct: 181 LTDALLQSSVCKNEDGQAAFGGGGNGMDNAFGMDVENDPDLALALRVSMEEERARQAAAA 240
Query: 235 XXXXXXXXXXXXXXXXXVPKPTAEAKDAPGDMATAAHPVGGQPDFATMTEEEQIAFAMQM 294
A+A+ A A AA P+ + D MTEE+Q+ +A+++
Sbjct: 241 AANGGAADSG------------ADAEVAA---AAAAVPLE-EMDMGAMTEEQQLEWALRL 284
Query: 295 SMQDTQXXXXXXXXXXXXXXXXXXXXXXXMDTDEMVNDAAFLQSVLENLPGVDPQ 349
SMQ+ + D+++N+ LQ ++++LP + +
Sbjct: 285 SMQENAPAEQPQVQHEQMDVDGAPAVGGD-NLDDLMNNPELLQQIVDDLPAANAE 338
>TAIR|locus:2121269 [details] [associations]
symbol:RPN10 "regulatory particle non-ATPase 10"
species:3702 "Arabidopsis thaliana" [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=ISS;IDA]
[GO:0000502 "proteasome complex" evidence=IDA;TAS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0005634 "nucleus" evidence=TAS] [GO:0030163 "protein catabolic
process" evidence=TAS] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] [GO:0009555 "pollen development"
evidence=IMP] [GO:0009651 "response to salt stress"
evidence=RCA;IMP] [GO:0009733 "response to auxin stimulus"
evidence=IMP] [GO:0009735 "response to cytokinin stimulus"
evidence=IEP;RCA;IMP] [GO:0009737 "response to abscisic acid
stimulus" evidence=IMP] [GO:0009744 "response to sucrose stimulus"
evidence=IMP] [GO:0010029 "regulation of seed germination"
evidence=IMP] [GO:0010150 "leaf senescence" evidence=IMP]
[GO:0048366 "leaf development" evidence=IMP] [GO:0048455 "stamen
formation" evidence=IMP] [GO:0048528 "post-embryonic root
development" evidence=IMP] [GO:0048767 "root hair elongation"
evidence=RCA;IMP] [GO:0016020 "membrane" evidence=IDA] [GO:0009408
"response to heat" evidence=IMP] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=RCA;IMP]
[GO:0043248 "proteasome assembly" evidence=RCA;IMP] [GO:0051788
"response to misfolded protein" evidence=RCA;IMP] [GO:0080129
"proteasome core complex assembly" evidence=RCA;IMP] [GO:0005829
"cytosol" evidence=IDA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006096 "glycolysis" evidence=RCA] [GO:0006623 "protein
targeting to vacuole" evidence=RCA] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0006833 "water transport"
evidence=RCA] [GO:0006972 "hyperosmotic response" evidence=RCA]
[GO:0007010 "cytoskeleton organization" evidence=RCA] [GO:0007030
"Golgi organization" evidence=RCA] [GO:0009266 "response to
temperature stimulus" evidence=RCA] [GO:0009407 "toxin catabolic
process" evidence=RCA] [GO:0009853 "photorespiration" evidence=RCA]
[GO:0010498 "proteasomal protein catabolic process" evidence=RCA]
[GO:0046686 "response to cadmium ion" evidence=RCA] [GO:0001653
"peptide receptor activity" evidence=IDA] InterPro:IPR002035
InterPro:IPR027040 PROSITE:PS50234 SMART:SM00327 Pfam:PF02809
GO:GO:0005829 GO:GO:0009737 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0009735 GO:GO:0009733 GO:GO:0043161
GO:GO:0016020 GO:GO:0009555 GO:GO:0009651 GO:GO:0009744
GO:GO:0010150 GO:GO:0006974 GO:GO:0048767 GO:GO:0009408
GO:GO:0000502 GO:GO:0043248 GO:GO:0010029 KO:K03029
InterPro:IPR003903 SMART:SM00726 PROSITE:PS50330 EMBL:AL035656
EMBL:AL161593 GO:GO:0051788 EMBL:AL035540 GO:GO:0048528
GO:GO:0001653 eggNOG:COG5148 EMBL:U33269 EMBL:AF360319
EMBL:AY113889 IPI:IPI00542443 PIR:T05691 RefSeq:NP_195575.1
UniGene:At.1553 ProteinModelPortal:P55034 SMR:P55034 IntAct:P55034
STRING:P55034 PaxDb:P55034 PRIDE:P55034 EnsemblPlants:AT4G38630.1
GeneID:830019 KEGG:ath:AT4G38630 TAIR:At4g38630
HOGENOM:HOG000165630 InParanoid:P55034 OMA:SDYQRNG PhylomeDB:P55034
ProtClustDB:CLSN2685445 Genevestigator:P55034 GermOnline:AT4G38630
GO:GO:0048455 PANTHER:PTHR10223 Uniprot:P55034
Length = 386
Score = 608 (219.1 bits), Expect = 2.7e-59, P = 2.7e-59
Identities = 145/368 (39%), Positives = 202/368 (54%)
Query: 1 MVLESTMICVDNSDFMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLAMADS-VE 59
MVLE+TMIC+DNS++MRNGD+ P+RLQAQ +AVNL+C +KT+SNPEN VG+L MA V
Sbjct: 1 MVLEATMICIDNSEWMRNGDYSPSRLQAQTEAVNLLCGAKTQSNPENTVGILTMAGKGVR 60
Query: 60 VLATLTSDVGRILSKLHQVQPNGNINFMTGIRIAHLALKHRQGKNHKMRIIAFVGSPVDL 119
VL T TSD+G+IL+ +H + G IN I+IA LALKHRQ KN + RII F GSP+
Sbjct: 61 VLTTPTSDLGKILACMHGLDVGGEINLTAAIQIAQLALKHRQNKNQRQRIIVFAGSPIKY 120
Query: 120 EERELTKLAKRLKKEKVNVDIVSFGEE--VVNTELLNTFISTLNGKDGSGSHMVTVAVGP 177
E++ L + KRLKK V++DIV+FGE+ + L ++ +N DGS H+V V G
Sbjct: 121 EKKALEIVGKRLKKNSVSLDIVNFGEDDDEEKPQKLEALLTAVNNNDGS--HIVHVPSGA 178
Query: 178 H-LSDALISSPIIQGEDGAGG---------APGSSYEFGVDPNEDPELALALRVSMXXXX 227
+ LSD L+S+P+ G++GA G A G ++FGVDPN DPELALALRVSM
Sbjct: 179 NALSDVLLSTPVFTGDEGASGYVSAAAAAAAAGGDFDFGVDPNIDPELALALRVSMEEER 238
Query: 228 XXXXXXXXXXXXXXXXXXXXXXXXVPKPTAEAKDAPGDMATAAHPVGGQPDFATMTEEEQ 287
A+ + A P+ D A + ++
Sbjct: 239 ARQEAAAKKAADEAGQKDKDGDTASASQETVARTTDKN----AEPM--DEDSALL--DQA 290
Query: 288 IAFAM-QMSMQDTQXXXXXXXXXXXXXXXXXXXXXXXMDTDEMVNDAAFLQSVLENLPGV 346
IA ++ ++M + + ++ + AF+ SVL +LPGV
Sbjct: 291 IAMSVGDVNMSEAADEDQDLALALQMSMSGEESSEATGAGNNLLGNQAFISSVLSSLPGV 350
Query: 347 DPQSAEVR 354
DP V+
Sbjct: 351 DPNDPAVK 358
>DICTYBASE|DDB_G0275775 [details] [associations]
symbol:psmD4 "ubiquitin interacting motif (UIM)
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0000502
"proteasome complex" evidence=IEA;ISS] InterPro:IPR002035
InterPro:IPR027040 PROSITE:PS50234 SMART:SM00327
dictyBase:DDB_G0275775 GO:GO:0005634 GenomeReviews:CM000151_GR
EMBL:AAFI02000013 GO:GO:0004175 GO:GO:0000502 GO:GO:0006511
KO:K03029 InterPro:IPR003903 SMART:SM00726 PROSITE:PS50330
eggNOG:COG5148 OMA:SDYQRNG PANTHER:PTHR10223 RefSeq:XP_643477.1
STRING:Q553E0 EnsemblProtists:DDB0232981 GeneID:8620058
KEGG:ddi:DDB_G0275775 ProtClustDB:CLSZ2515584 Uniprot:Q553E0
Length = 349
Score = 534 (193.0 bits), Expect = 2.9e-56, Sum P(2) = 2.9e-56
Identities = 114/225 (50%), Positives = 163/225 (72%)
Query: 1 MVLESTMICVDNSDFMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLAMADSV-E 59
M LE+T++C+DNS++MRNGDF P+R +AQ+DAVNL+C SKT+SNPE+ V +++MA E
Sbjct: 1 MTLEATIVCLDNSEWMRNGDFTPSRSEAQKDAVNLICASKTQSNPESAVSIMSMAGKKPE 60
Query: 60 VLATLTSDVGRILSKLHQVQPNGNINFMTGIRIAHLALKHRQGKNHKMRIIAFVGSPVDL 119
VL TLT ++ +ILS +++ NG I+F T ++IA LAL+HRQ + RIIAFVGSP+
Sbjct: 61 VLVTLTQELSKILSGAQELKINGKIDFSTTMQIAQLALRHRQNNHQHPRIIAFVGSPLKE 120
Query: 120 EERELTKLAKRLKKEKVNVDIVSFGEEVVNTELLNTFISTLNGKDGSGSHMVTVAVGPH- 178
+ EL +LAKRLKK V VDI++FGE N++ L FI+ +N D S H++TV GPH
Sbjct: 121 TKEELIQLAKRLKKNGVAVDIINFGEVTENSDKLEAFINDVNNNDES--HLLTVPPGPHI 178
Query: 179 LSDALISSPIIQGEDGAGGAPGSSYEFGVDPNEDPELALALRVSM 223
LSD ++ SPI+ E G+G GS EF ++ + DP+LA+AL++S+
Sbjct: 179 LSDIILQSPIV--ESGSGQF-GS--EF-INADTDPDLAMALKLSL 217
Score = 63 (27.2 bits), Expect = 2.9e-56, Sum P(2) = 2.9e-56
Identities = 23/86 (26%), Positives = 31/86 (36%)
Query: 264 GDMATAAHPVGGQPDFATMTEEEQIAFAMQMSMQDTQXXXXXXXXXXXXXXXXXXXXXXX 323
G T A P D ++ ++A A+ +SM +
Sbjct: 242 GTTTTTA-PTESNMD-VNFEDDPELAEALALSMATDKMEVQSSTTNTDSQPPQQQQQPPT 299
Query: 324 MDTD-EMVNDAAFLQSVLENLPGVDP 348
DT E D FL S L +LPGVDP
Sbjct: 300 DDTSSEAFKDQDFLNSTLNSLPGVDP 325
>CGD|CAL0005551 [details] [associations]
symbol:RPN10 species:5476 "Candida albicans" [GO:0031593
"polyubiquitin binding" evidence=IEA] [GO:0005198 "structural
molecule activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0042177 "negative regulation of protein catabolic
process" evidence=IEA] InterPro:IPR002035 InterPro:IPR027040
PROSITE:PS50234 SMART:SM00327 CGD:CAL0005551 KO:K03029
InterPro:IPR003903 SMART:SM00726 PROSITE:PS50330 EMBL:AACQ01000107
EMBL:AACQ01000110 eggNOG:COG5148 PANTHER:PTHR10223
RefSeq:XP_714135.1 RefSeq:XP_714273.1 ProteinModelPortal:Q59X29
STRING:Q59X29 GeneID:3644080 GeneID:3644200 KEGG:cal:CaO19.11583
KEGG:cal:CaO19.4102 Uniprot:Q59X29
Length = 279
Score = 544 (196.6 bits), Expect = 1.7e-52, P = 1.7e-52
Identities = 119/235 (50%), Positives = 159/235 (67%)
Query: 1 MVLESTMICVDNSDFMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLAMADS-VE 59
MVLE+TMI +DNS++MRNGDFL +R +AQ A + +K SNPEN VGLLA S +
Sbjct: 1 MVLEATMIAIDNSEYMRNGDFLTSRYEAQLTATEFIFQNKINSNPENTVGLLAYGGSGPQ 60
Query: 60 VLATLTSDVGRILSKLHQVQPNGNINFMTGIRIAHLALKHRQGKNHKMRIIAFVGSPVDL 119
VL+TLT+D G+IL+ +H+ + G NF +GI++A LALKHRQ K + RII FVGSP+
Sbjct: 61 VLSTLTTDFGKILAGVHETKIQGENNFSSGIQVAALALKHRQNKVQQQRIIIFVGSPIKE 120
Query: 120 EERELTKLAKRLKKEKVNVDIVSFGEEVVNTELLNTFISTLNGKDGSGSHMVTVAVGPHL 179
E+EL KLAK++KK V VDI++FGEE VNT L F ST+N D S H+VT++ GP L
Sbjct: 121 SEKELEKLAKKMKKNNVAVDIINFGEEGVNTAKLERFQSTINNHDNS--HLVTISPGPRL 178
Query: 180 S-DALISSPIIQGEDGAG-GAPGSSYEF-G--------VDPNEDPELALALRVSM 223
+ + SSPI+ + G G G G +F G +DPN DP+LA+ALR+S+
Sbjct: 179 LYEVVASSPILVEDGGFGAGVSGGDMDFFGGAGGAGDIIDPNMDPDLAMALRLSL 233
>SGD|S000001243 [details] [associations]
symbol:RPN10 "Non-ATPase base subunit of the regulatory
particle of the proteasome" species:4932 "Saccharomyces cerevisiae"
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA;IDA;IPI] [GO:0000502 "proteasome complex"
evidence=IEA;IMP] [GO:0005198 "structural molecule activity"
evidence=IMP] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA;IMP] [GO:0031593 "polyubiquitin binding"
evidence=IDA] InterPro:IPR002035 InterPro:IPR027040 PROSITE:PS50234
SMART:SM00327 SGD:S000001243 GO:GO:0005198 EMBL:BK006934
GO:GO:0006511 EMBL:U00030 GO:GO:0031593 RefSeq:NP_012070.3
GeneID:856607 KEGG:sce:YHR200W KO:K03029 InterPro:IPR003903
SMART:SM00726 PROSITE:PS50330 eggNOG:COG5148 GO:GO:0008540 PDB:4B4T
PDBsum:4B4T HOGENOM:HOG000165630 PANTHER:PTHR10223
GeneTree:ENSGT00530000064050 OMA:HRQNKVQ OrthoDB:EOG4GXJX7
EMBL:D78022 EMBL:AY558289 PIR:S46677 RefSeq:NP_012072.3
ProteinModelPortal:P38886 SMR:P38886 DIP:DIP-2100N IntAct:P38886
MINT:MINT-557564 STRING:P38886 PaxDb:P38886 PeptideAtlas:P38886
EnsemblFungi:YHR200W GeneID:856609 KEGG:sce:YHR202W NextBio:982517
Genevestigator:P38886 GermOnline:YHR200W Uniprot:P38886
Length = 268
Score = 506 (183.2 bits), Expect = 1.8e-48, P = 1.8e-48
Identities = 113/236 (47%), Positives = 153/236 (64%)
Query: 1 MVLESTMICVDNSDFMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLAMADS-VE 59
MVLE+T++ +DNS++ RNGDF TR +AQ D+V + +K SNPEN VGL++ A +
Sbjct: 1 MVLEATVLVIDNSEYSRNGDFPRTRFEAQIDSVEFIFQAKRNSNPENTVGLISGAGANPR 60
Query: 60 VLATLTSDVGRILSKLHQVQPNGNINFMTGIRIAHLALKHRQGKNHKMRIIAFVGSPVDL 119
VL+T T++ G+IL+ LH Q G ++ T ++IA L LKHRQ K RI+AFV SP+
Sbjct: 61 VLSTFTAEFGKILAGLHDTQIEGKLHMATALQIAQLTLKHRQNKVQHQRIVAFVCSPISD 120
Query: 120 EERELTKLAKRLKKEKVNVDIVSFGEEVVNTELLNTFISTLNGKDGSGSHMVTVAVGPHL 179
EL +LAK LKK V VDI++FGE NTELL+ FI+ +N SH++TV GP L
Sbjct: 121 SRDELIRLAKTLKKNNVAVDIINFGEIEQNTELLDEFIAAVNNPQEETSHLLTVTPGPRL 180
Query: 180 S-DALISSPII--QGEDGAG---GAPGSS------YEFGVDPNEDPELALALRVSM 223
+ + SSPII +G G G G+ G S +FGVDP+ DPELA+ALR+SM
Sbjct: 181 LYENIASSPIILEEGSSGMGAFGGSGGDSDANGTFMDFGVDPSMDPELAMALRLSM 236
>POMBASE|SPAC637.10c [details] [associations]
symbol:rpn10 "19S proteasome regulatory subunit Rpn10"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IC]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISO] [GO:0042177 "negative regulation of protein catabolic
process" evidence=IMP] [GO:0043130 "ubiquitin binding"
evidence=ISM] InterPro:IPR002035 InterPro:IPR027040 PROSITE:PS50234
SMART:SM00327 PomBase:SPAC637.10c GO:GO:0005829 GO:GO:0005634
GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0006511
GO:GO:0042177 KO:K03029 InterPro:IPR003903 PROSITE:PS50330
GO:GO:0043130 eggNOG:COG5148 GO:GO:0008540 HOGENOM:HOG000165630
PANTHER:PTHR10223 PIR:T39002 RefSeq:NP_594628.1 PDB:2X5N
PDBsum:2X5N ProteinModelPortal:O94444 IntAct:O94444 STRING:O94444
PRIDE:O94444 EnsemblFungi:SPAC637.10c.1 GeneID:2543682
KEGG:spo:SPAC637.10c OMA:HRQNKVQ OrthoDB:EOG4GXJX7 NextBio:20804688
Uniprot:O94444
Length = 243
Score = 501 (181.4 bits), Expect = 6.0e-48, P = 6.0e-48
Identities = 108/225 (48%), Positives = 147/225 (65%)
Query: 1 MVLESTMICVDNSDFMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLAMAD-SVE 59
MVLE+TMI +DNS++M NGD++PTR +AQ+D V+++ + K NPEN GL+ + D S +
Sbjct: 1 MVLEATMILIDNSEWMINGDYIPTRFEAQKDTVHMIFNQKINDNPENMCGLMTIGDNSPQ 60
Query: 60 VLATLTSDVGRILSKLHQVQPNGNINFMTGIRIAHLALKHRQGKNHKMRIIAFVGSPVDL 119
VL+TLT D G+ LS +H + GN F GI+IA LALKHR+ K + RI+AFVGSP+
Sbjct: 61 VLSTLTRDYGKFLSAMHDLPVRGNAKFGDGIQIAQLALKHRENKIQRQRIVAFVGSPIVE 120
Query: 120 EERELTKLAKRLKKEKVNVDIVSFGEEVVNTELLNTFISTLNGKDGSGSHMVTVAVGPHL 179
+E+ L +LAKR+KK V +DI+ GE + N L FI N D H+V++ P L
Sbjct: 121 DEKNLIRLAKRMKKNNVAIDIIHIGE-LQNESALQHFIDAANSSDSC--HLVSIPPSPQL 177
Query: 180 -SDALISSPIIQGEDGAGGAPGSSYEFGVDPNEDPELALALRVSM 223
SD + SPI QG A + +E+GVDPN D ELALAL +SM
Sbjct: 178 LSDLVNQSPIGQGVV----ASQNQFEYGVDPNLDVELALALELSM 218
>UNIPROTKB|G4MS79 [details] [associations]
symbol:MGG_04506 "26S proteasome non-ATPase regulatory
subunit 4" species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002035 InterPro:IPR027040 PROSITE:PS50234
SMART:SM00327 GO:GO:0000502 KO:K03029 InterPro:IPR003903
SMART:SM00726 PROSITE:PS50330 EMBL:CM001231 PANTHER:PTHR10223
RefSeq:XP_003710949.1 ProteinModelPortal:G4MS79
EnsemblFungi:MGG_04506T0 GeneID:2678171 KEGG:mgr:MGG_04506
Uniprot:G4MS79
Length = 294
Score = 451 (163.8 bits), Expect = 1.2e-42, P = 1.2e-42
Identities = 108/234 (46%), Positives = 145/234 (61%)
Query: 1 MVLESTMICVDNSDFMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLAMADS-VE 59
M LE+ MI VDNS+ RNGD+ PTR AQ DAVN++ T NPE++VGL++M E
Sbjct: 1 MPLEAVMIVVDNSESSRNGDYTPTRFDAQADAVNVLFQHVTNGNPESSVGLMSMGGKDPE 60
Query: 60 VLATLTSDVGRILSKLHQVQP--NGNINFMTGIRIAHLALKHRQGKNHKMRIIAFVGSPV 117
VL TLTSD G+IL LH+ + +G+ + T I++A LALKHRQ + RI+AFV SPV
Sbjct: 61 VLVTLTSDQGKILEGLHRTKKKVSGSSHLATAIQVASLALKHRQNTTQRTRIVAFVCSPV 120
Query: 118 DLEERELTKLAKRLKKEKVNVDIVSFGEEVVNT-ELLNTFISTLNGKDGSGSHMVTVAV- 175
E++ L +LA +LKK V VD V FG+ +T + L F + + +G+ SH+V +
Sbjct: 121 SDEQKALVQLAGKLKKNNVTVDFVLFGDLDDDTSKKLEAFNAKVKNNEGN-SHLVVIPPS 179
Query: 176 GPHLSDALISSPII---QGEDGAGGAPGSSYEFG---VDPNEDPELALALRVSM 223
G LSD LI++PI G A G G +FG DP DPELALALR+S+
Sbjct: 180 GNLLSDQLIATPIFGEGAGSSAAAGGGGGGGDFGDLEFDPATDPELALALRMSL 233
>UNIPROTKB|H0Y3Y9 [details] [associations]
symbol:PSMD4 "26S proteasome non-ATPase regulatory subunit
4" species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IEA]
InterPro:IPR027040 Pfam:PF02809 InterPro:IPR003903 SMART:SM00726
PROSITE:PS50330 EMBL:AL592424 EMBL:AL391069 PANTHER:PTHR10223
HGNC:HGNC:9561 ChiTaRS:PSMD4 ProteinModelPortal:H0Y3Y9 PRIDE:H0Y3Y9
Ensembl:ENST00000445776 Bgee:H0Y3Y9 Uniprot:H0Y3Y9
Length = 193
Score = 170 (64.9 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 39/102 (38%), Positives = 53/102 (51%)
Query: 256 TAEAKDAPGDMATAAHPVG--GQPDFATMTEEEQIAFAMQMSMQDTQXXXXXXXXXXXXX 313
T ++ DA M + G G PD ++MTEEEQIA+AMQMS+Q +
Sbjct: 69 TEDSDDALLKMTISQQEFGRTGLPDLSSMTEEEQIAYAMQMSLQGAEFGQAESADIDASS 128
Query: 314 XXXXXXXXXXMDTDEMVNDAAFLQSVLENLPGVDPQSAEVRH 355
D +++ D FLQSVLENLPGVDP + +R+
Sbjct: 129 AMDTSEPAKEEDDYDVMQDPEFLQSVLENLPGVDPNNEAIRN 170
Score = 144 (55.7 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 42/115 (36%), Positives = 58/115 (50%)
Query: 114 GSPVDLEERELTKLAKRLKKEKVNVDIVSFGEEVVNTEL----LNTFISTLNGKDGSGSH 169
GSPV+ E++L KLAKRLKKEKVNVDI++FGEE + + S +
Sbjct: 2 GSPVEDNEKDLVKLAKRLKKEKVNVDIINFGEEALRVSMEEQRQRQEEEARRAAAASAAE 61
Query: 170 MVTVAVGPHLSD-ALISSPIIQGEDGAGGAPGSSYEFGVDPNEDPELALALRVSM 223
G SD AL+ I Q E G G P S E+ ++A A+++S+
Sbjct: 62 AGIATTGTEDSDDALLKMTISQQEFGRTGLPDLS-----SMTEEEQIAYAMQMSL 111
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.131 0.365 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 375 304 0.00098 115 3 11 23 0.44 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 25
No. of states in DFA: 561 (60 KB)
Total size of DFA: 172 KB (2102 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 25.86u 0.09s 25.95t Elapsed: 00:00:07
Total cpu time: 25.87u 0.09s 25.96t Elapsed: 00:00:07
Start: Thu Aug 15 12:45:30 2013 End: Thu Aug 15 12:45:37 2013