Your job contains 1 sequence.
>psy14666
MRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLAMADSVEVLATLTSDVGRILSKL
HQVQPNGNINFMTGIRIAHLALKHRQGKNHKMRIIAFVGSPVDLEERELTKLAKRLKKEK
VNVDIVSFGEEREGGKGQDEEEEEVQNTDRPNCHYNLTLSTSLEKSSACETNTSILTPLG
SIPPPDLTSLVRCPHVSHVVAMITTSLNVDNSDFMRNGDFLPTRLQAQQDAVNLVCHSKT
RSNPENNVGLLAMAEK
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy14666
(256 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|D4A9C9 - symbol:Psmd4 "Protein Psmd4" species:1... 543 1.8e-54 2
UNIPROTKB|Q58D01 - symbol:PSMD4 "26S proteasome non-ATPas... 543 2.1e-52 1
UNIPROTKB|Q58DA0 - symbol:PSMD4 "26S proteasome non-ATPas... 543 2.1e-52 1
UNIPROTKB|F1PRW0 - symbol:PSMD4 "Uncharacterized protein"... 543 2.1e-52 1
UNIPROTKB|P55036 - symbol:PSMD4 "26S proteasome non-ATPas... 543 2.1e-52 1
UNIPROTKB|Q5VWC4 - symbol:PSMD4 "26S proteasome non-ATPas... 543 2.1e-52 1
UNIPROTKB|Q32YV9 - symbol:PSMD4 "Uncharacterized protein"... 543 2.1e-52 1
MGI|MGI:1201670 - symbol:Psmd4 "proteasome (prosome, macr... 543 2.1e-52 1
RGD|621109 - symbol:Psmd4 "proteasome (prosome, macropain... 543 2.1e-52 1
UNIPROTKB|O88321 - symbol:Psmd4 "Proteasome (Prosome, mac... 543 2.1e-52 1
UNIPROTKB|A6PVX3 - symbol:PSMD4 "26S proteasome non-ATPas... 543 2.1e-52 1
ZFIN|ZDB-GENE-040625-104 - symbol:psmd4a "proteasome (pro... 542 2.7e-52 1
ZFIN|ZDB-GENE-050417-96 - symbol:psmd4b "proteasome (pros... 539 5.6e-52 1
FB|FBgn0015283 - symbol:Rpn10 "Regulatory particle non-AT... 490 8.8e-47 1
UNIPROTKB|A2A3N6 - symbol:PIPSL "Putative PIP5K1A and PSM... 494 1.9e-46 1
WB|WBGene00004466 - symbol:rpn-10 species:6239 "Caenorhab... 421 1.8e-39 1
TAIR|locus:2121269 - symbol:RPN10 "regulatory particle no... 365 1.5e-33 1
UNIPROTKB|H9KYX1 - symbol:H9KYX1 "Uncharacterized protein... 368 8.2e-33 1
DICTYBASE|DDB_G0275775 - symbol:psmD4 "ubiquitin interact... 348 9.8e-32 1
UNIPROTKB|H9KYX2 - symbol:H9KYX2 "Uncharacterized protein... 347 1.3e-31 1
CGD|CAL0005551 - symbol:RPN10 species:5476 "Candida albic... 341 5.4e-31 1
POMBASE|SPAC637.10c - symbol:rpn10 "19S proteasome regula... 328 1.3e-29 1
UNIPROTKB|G4MS79 - symbol:MGG_04506 "26S proteasome non-A... 301 9.4e-27 1
SGD|S000001243 - symbol:RPN10 "Non-ATPase base subunit of... 296 3.2e-26 1
UNIPROTKB|H0Y3Y9 - symbol:PSMD4 "26S proteasome non-ATPas... 113 7.9e-05 1
>UNIPROTKB|D4A9C9 [details] [associations]
symbol:Psmd4 "Protein Psmd4" species:10116 "Rattus
norvegicus" [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=IEA] InterPro:IPR002035
InterPro:IPR027040 PROSITE:PS50234 SMART:SM00327 Pfam:PF02809
RGD:621109 InterPro:IPR003903 SMART:SM00726 PROSITE:PS50330
PANTHER:PTHR10223 EMBL:AC130969 IPI:IPI00561561
Ensembl:ENSRNOT00000047862 ArrayExpress:D4A9C9 Uniprot:D4A9C9
Length = 367
Score = 543 (196.2 bits), Expect = 1.8e-54, Sum P(2) = 1.8e-54
Identities = 104/128 (81%), Positives = 114/128 (89%)
Query: 1 MRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLAMADSVEVLATLTSDVGRILSKL 60
MRNGDFLPTRLQAQQDAVN+VCHSKTRSNPENNVGL+ +A+ EVL TLT D GRILSKL
Sbjct: 16 MRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITLANDCEVLTTLTPDTGRILSKL 75
Query: 61 HQVQPNGNINFMTGIRIAHLALKHRQGKNHKMRIIAFVGSPVDLEERELTKLAKRLKKEK 120
H VQP G I F TGIR+AHLALKHRQGKNHKMRIIAFVGSPV+ E++L KLAKRLKKEK
Sbjct: 76 HTVQPKGKITFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPVEDNEKDLVKLAKRLKKEK 135
Query: 121 VNVDIVSF 128
VNVDI++F
Sbjct: 136 VNVDIINF 143
Score = 224 (83.9 bits), Expect = 2.6e-18, P = 2.6e-18
Identities = 41/51 (80%), Positives = 48/51 (94%)
Query: 204 TTSLNVDNSDFMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLAMA 254
+T + VDNS++MRNGDFLPTRLQAQQDAVN+VCHSKTRSNPENNVGL+ +A
Sbjct: 5 STMVCVDNSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITLA 55
Score = 37 (18.1 bits), Expect = 1.8e-54, Sum P(2) = 1.8e-54
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 160 STSLEKSSACETNTSILTPLGSIPP--PDLTS 189
S ++ SSA +T+ + S PP P L S
Sbjct: 308 SGDIDASSAMDTSEPVKVRASSDPPIQPGLKS 339
>UNIPROTKB|Q58D01 [details] [associations]
symbol:PSMD4 "26S proteasome non-ATPase regulatory subunit
4" species:9913 "Bos taurus" [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR002035 InterPro:IPR027040 PROSITE:PS50234 SMART:SM00327
Pfam:PF02809 GO:GO:0000502 InterPro:IPR003903 SMART:SM00726
PROSITE:PS50330 HOGENOM:HOG000165630 PANTHER:PTHR10223
UniGene:Bt.104130 UniGene:Bt.12570 GeneTree:ENSGT00530000064050
HOVERGEN:HBG000425 EMBL:DAAA02007252 EMBL:BT021796 IPI:IPI00841753
SMR:Q58D01 STRING:Q58D01 Ensembl:ENSBTAT00000046341 Uniprot:Q58D01
Length = 316
Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
Identities = 104/128 (81%), Positives = 114/128 (89%)
Query: 1 MRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLAMADSVEVLATLTSDVGRILSKL 60
MRNGDFLPTRLQAQQDAVN+VCHSKTRSNPENNVGL+ +A+ EVL TLT D GRILSKL
Sbjct: 16 MRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITLANDCEVLTTLTPDTGRILSKL 75
Query: 61 HQVQPNGNINFMTGIRIAHLALKHRQGKNHKMRIIAFVGSPVDLEERELTKLAKRLKKEK 120
H VQP G I F TGIR+AHLALKHRQGKNHKMRIIAFVGSPV+ E++L KLAKRLKKEK
Sbjct: 76 HTVQPKGKITFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPVEDNEKDLVKLAKRLKKEK 135
Query: 121 VNVDIVSF 128
VNVDI++F
Sbjct: 136 VNVDIINF 143
Score = 224 (83.9 bits), Expect = 1.4e-18, P = 1.4e-18
Identities = 41/51 (80%), Positives = 48/51 (94%)
Query: 204 TTSLNVDNSDFMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLAMA 254
+T + VDNS++MRNGDFLPTRLQAQQDAVN+VCHSKTRSNPENNVGL+ +A
Sbjct: 5 STMVCVDNSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITLA 55
>UNIPROTKB|Q58DA0 [details] [associations]
symbol:PSMD4 "26S proteasome non-ATPase regulatory subunit
4" species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] InterPro:IPR002035
InterPro:IPR027040 PROSITE:PS50234 SMART:SM00327 Pfam:PF02809
KO:K03029 InterPro:IPR003903 SMART:SM00726 PROSITE:PS50330
eggNOG:COG5148 OrthoDB:EOG4JQ3Z0 GO:GO:0022624 HOGENOM:HOG000165630
OMA:SDYQRNG PANTHER:PTHR10223 EMBL:BT021555 EMBL:BT021697
EMBL:BT021757 EMBL:BT026173 EMBL:BC119964 IPI:IPI00704307
RefSeq:NP_001013616.2 UniGene:Bt.104130 UniGene:Bt.12570
ProteinModelPortal:Q58DA0 SMR:Q58DA0 STRING:Q58DA0 PRIDE:Q58DA0
Ensembl:ENSBTAT00000008019 GeneID:282016 KEGG:bta:282016 CTD:5710
GeneTree:ENSGT00530000064050 HOVERGEN:HBG000425 InParanoid:Q58DA0
NextBio:20805881 ArrayExpress:Q58DA0 Uniprot:Q58DA0
Length = 382
Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
Identities = 104/128 (81%), Positives = 114/128 (89%)
Query: 1 MRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLAMADSVEVLATLTSDVGRILSKL 60
MRNGDFLPTRLQAQQDAVN+VCHSKTRSNPENNVGL+ +A+ EVL TLT D GRILSKL
Sbjct: 16 MRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITLANDCEVLTTLTPDTGRILSKL 75
Query: 61 HQVQPNGNINFMTGIRIAHLALKHRQGKNHKMRIIAFVGSPVDLEERELTKLAKRLKKEK 120
H VQP G I F TGIR+AHLALKHRQGKNHKMRIIAFVGSPV+ E++L KLAKRLKKEK
Sbjct: 76 HTVQPKGKITFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPVEDNEKDLVKLAKRLKKEK 135
Query: 121 VNVDIVSF 128
VNVDI++F
Sbjct: 136 VNVDIINF 143
Score = 224 (83.9 bits), Expect = 3.2e-18, P = 3.2e-18
Identities = 41/51 (80%), Positives = 48/51 (94%)
Query: 204 TTSLNVDNSDFMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLAMA 254
+T + VDNS++MRNGDFLPTRLQAQQDAVN+VCHSKTRSNPENNVGL+ +A
Sbjct: 5 STMVCVDNSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITLA 55
>UNIPROTKB|F1PRW0 [details] [associations]
symbol:PSMD4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] InterPro:IPR002035
InterPro:IPR027040 PROSITE:PS50234 SMART:SM00327 Pfam:PF02809
KO:K03029 InterPro:IPR003903 SMART:SM00726 PROSITE:PS50330
OMA:SDYQRNG PANTHER:PTHR10223 CTD:5710 GeneTree:ENSGT00530000064050
EMBL:AAEX03011056 RefSeq:NP_001130036.1 Ensembl:ENSCAFT00000019980
GeneID:100192385 KEGG:cfa:100192385 Uniprot:F1PRW0
Length = 377
Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
Identities = 104/128 (81%), Positives = 114/128 (89%)
Query: 1 MRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLAMADSVEVLATLTSDVGRILSKL 60
MRNGDFLPTRLQAQQDAVN+VCHSKTRSNPENNVGL+ +A+ EVL TLT D GRILSKL
Sbjct: 16 MRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITLANDCEVLTTLTPDTGRILSKL 75
Query: 61 HQVQPNGNINFMTGIRIAHLALKHRQGKNHKMRIIAFVGSPVDLEERELTKLAKRLKKEK 120
H VQP G I F TGIR+AHLALKHRQGKNHKMRIIAFVGSPV+ E++L KLAKRLKKEK
Sbjct: 76 HTVQPKGKITFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPVEDNEKDLVKLAKRLKKEK 135
Query: 121 VNVDIVSF 128
VNVDI++F
Sbjct: 136 VNVDIINF 143
Score = 224 (83.9 bits), Expect = 3.0e-18, P = 3.0e-18
Identities = 41/51 (80%), Positives = 48/51 (94%)
Query: 204 TTSLNVDNSDFMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLAMA 254
+T + VDNS++MRNGDFLPTRLQAQQDAVN+VCHSKTRSNPENNVGL+ +A
Sbjct: 5 STMVCVDNSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITLA 55
>UNIPROTKB|P55036 [details] [associations]
symbol:PSMD4 "26S proteasome non-ATPase regulatory subunit
4" species:9606 "Homo sapiens" [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR002035 InterPro:IPR027040
PROSITE:PS50234 SMART:SM00327 Pfam:PF02809 GO:GO:0005829
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0044281 GO:GO:0000082
GO:GO:0051436 KO:K03029 InterPro:IPR003903 SMART:SM00726
PROSITE:PS50330 GO:GO:0000216 GO:GO:0000209 GO:GO:0000084
EMBL:CH471121 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 EMBL:AL592424 EMBL:AL391069 eggNOG:COG5148
OrthoDB:EOG4JQ3Z0 GO:GO:0022624 HOGENOM:HOG000165630
PANTHER:PTHR10223 CTD:5710 HOVERGEN:HBG000425 EMBL:U51007
EMBL:U24704 EMBL:AB033605 EMBL:BC002365 EMBL:BC072008 EMBL:U72664
IPI:IPI00022694 IPI:IPI00216247 PIR:S63671 RefSeq:NP_002801.1
UniGene:Hs.505059 PDB:1P9C PDB:1P9D PDB:1UEL PDB:1YX4 PDB:1YX5
PDB:1YX6 PDB:2KDE PDB:2KDF PDBsum:1P9C PDBsum:1P9D PDBsum:1UEL
PDBsum:1YX4 PDBsum:1YX5 PDBsum:1YX6 PDBsum:2KDE PDBsum:2KDF
ProteinModelPortal:P55036 SMR:P55036 IntAct:P55036 MINT:MINT-105366
STRING:P55036 PhosphoSite:P55036 DMDM:1709796 PaxDb:P55036
PRIDE:P55036 DNASU:5710 Ensembl:ENST00000368884 GeneID:5710
KEGG:hsa:5710 UCSC:uc001exl.3 GeneCards:GC01P151227 HGNC:HGNC:9561
HPA:CAB047300 HPA:HPA039252 MIM:601648 neXtProt:NX_P55036
PharmGKB:PA33907 PhylomeDB:P55036 ChiTaRS:PSMD4
EvolutionaryTrace:P55036 GenomeRNAi:5710 NextBio:22186
ArrayExpress:P55036 Bgee:P55036 CleanEx:HS_PSMD4
Genevestigator:P55036 GermOnline:ENSG00000159352 Uniprot:P55036
Length = 377
Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
Identities = 104/128 (81%), Positives = 114/128 (89%)
Query: 1 MRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLAMADSVEVLATLTSDVGRILSKL 60
MRNGDFLPTRLQAQQDAVN+VCHSKTRSNPENNVGL+ +A+ EVL TLT D GRILSKL
Sbjct: 16 MRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITLANDCEVLTTLTPDTGRILSKL 75
Query: 61 HQVQPNGNINFMTGIRIAHLALKHRQGKNHKMRIIAFVGSPVDLEERELTKLAKRLKKEK 120
H VQP G I F TGIR+AHLALKHRQGKNHKMRIIAFVGSPV+ E++L KLAKRLKKEK
Sbjct: 76 HTVQPKGKITFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPVEDNEKDLVKLAKRLKKEK 135
Query: 121 VNVDIVSF 128
VNVDI++F
Sbjct: 136 VNVDIINF 143
Score = 224 (83.9 bits), Expect = 3.0e-18, P = 3.0e-18
Identities = 41/51 (80%), Positives = 48/51 (94%)
Query: 204 TTSLNVDNSDFMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLAMA 254
+T + VDNS++MRNGDFLPTRLQAQQDAVN+VCHSKTRSNPENNVGL+ +A
Sbjct: 5 STMVCVDNSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITLA 55
>UNIPROTKB|Q5VWC4 [details] [associations]
symbol:PSMD4 "26S proteasome non-ATPase regulatory subunit
4" species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IEA]
InterPro:IPR002035 InterPro:IPR027040 PROSITE:PS50234 SMART:SM00327
Pfam:PF02809 GO:GO:0000502 InterPro:IPR003903 SMART:SM00726
PROSITE:PS50330 EMBL:CH471121 EMBL:AL592424 EMBL:AL391069
OrthoDB:EOG4JQ3Z0 HOGENOM:HOG000165630 OMA:SDYQRNG
PANTHER:PTHR10223 HOVERGEN:HBG000425 IPI:IPI00216247
UniGene:Hs.505059 HGNC:HGNC:9561 ChiTaRS:PSMD4 SMR:Q5VWC4
STRING:Q5VWC4 Ensembl:ENST00000368881 Uniprot:Q5VWC4
Length = 380
Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
Identities = 104/128 (81%), Positives = 114/128 (89%)
Query: 1 MRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLAMADSVEVLATLTSDVGRILSKL 60
MRNGDFLPTRLQAQQDAVN+VCHSKTRSNPENNVGL+ +A+ EVL TLT D GRILSKL
Sbjct: 16 MRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITLANDCEVLTTLTPDTGRILSKL 75
Query: 61 HQVQPNGNINFMTGIRIAHLALKHRQGKNHKMRIIAFVGSPVDLEERELTKLAKRLKKEK 120
H VQP G I F TGIR+AHLALKHRQGKNHKMRIIAFVGSPV+ E++L KLAKRLKKEK
Sbjct: 76 HTVQPKGKITFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPVEDNEKDLVKLAKRLKKEK 135
Query: 121 VNVDIVSF 128
VNVDI++F
Sbjct: 136 VNVDIINF 143
Score = 224 (83.9 bits), Expect = 3.1e-18, P = 3.1e-18
Identities = 41/51 (80%), Positives = 48/51 (94%)
Query: 204 TTSLNVDNSDFMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLAMA 254
+T + VDNS++MRNGDFLPTRLQAQQDAVN+VCHSKTRSNPENNVGL+ +A
Sbjct: 5 STMVCVDNSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITLA 55
>UNIPROTKB|Q32YV9 [details] [associations]
symbol:PSMD4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IEA] InterPro:IPR002035
InterPro:IPR027040 PROSITE:PS50234 SMART:SM00327 Pfam:PF02809
GO:GO:0000502 KO:K03029 InterPro:IPR003903 SMART:SM00726
PROSITE:PS50330 HOGENOM:HOG000165630 OMA:SDYQRNG PANTHER:PTHR10223
CTD:5710 GeneTree:ENSGT00530000064050 HOVERGEN:HBG000425
EMBL:CU138569 EMBL:AY704418 RefSeq:NP_001038000.1 UniGene:Ssc.49786
SMR:Q32YV9 STRING:Q32YV9 Ensembl:ENSSSCT00000007264 GeneID:733583
KEGG:ssc:733583 Uniprot:Q32YV9
Length = 377
Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
Identities = 104/128 (81%), Positives = 114/128 (89%)
Query: 1 MRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLAMADSVEVLATLTSDVGRILSKL 60
MRNGDFLPTRLQAQQDAVN+VCHSKTRSNPENNVGL+ +A+ EVL TLT D GRILSKL
Sbjct: 16 MRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITLANDCEVLTTLTPDTGRILSKL 75
Query: 61 HQVQPNGNINFMTGIRIAHLALKHRQGKNHKMRIIAFVGSPVDLEERELTKLAKRLKKEK 120
H VQP G I F TGIR+AHLALKHRQGKNHKMRIIAFVGSPV+ E++L KLAKRLKKEK
Sbjct: 76 HTVQPKGKITFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPVEDNEKDLVKLAKRLKKEK 135
Query: 121 VNVDIVSF 128
VNVDI++F
Sbjct: 136 VNVDIINF 143
Score = 224 (83.9 bits), Expect = 3.0e-18, P = 3.0e-18
Identities = 41/51 (80%), Positives = 48/51 (94%)
Query: 204 TTSLNVDNSDFMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLAMA 254
+T + VDNS++MRNGDFLPTRLQAQQDAVN+VCHSKTRSNPENNVGL+ +A
Sbjct: 5 STMVCVDNSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITLA 55
>MGI|MGI:1201670 [details] [associations]
symbol:Psmd4 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 4" species:10090 "Mus musculus" [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0022624
"proteasome accessory complex" evidence=IDA] InterPro:IPR002035
InterPro:IPR027040 PROSITE:PS50234 SMART:SM00327 MGI:MGI:1201670
Pfam:PF02809 GO:GO:0005737 KO:K03029 InterPro:IPR003903
SMART:SM00726 PROSITE:PS50330 eggNOG:COG5148 OrthoDB:EOG4JQ3Z0
GO:GO:0022624 HOGENOM:HOG000165630 OMA:SDYQRNG PANTHER:PTHR10223
CTD:5710 GeneTree:ENSGT00530000064050 HOVERGEN:HBG000425
ChiTaRS:PSMD4 EMBL:AF013099 EMBL:AB029090 EMBL:AB029142
EMBL:AB029143 EMBL:AB029144 EMBL:AB029145 EMBL:AB029146
EMBL:AF175574 EMBL:BC009005 IPI:IPI00128564 IPI:IPI00230569
IPI:IPI00230570 IPI:IPI00345779 IPI:IPI00381291 PIR:JC6535
RefSeq:NP_032977.1 UniGene:Mm.2261 ProteinModelPortal:O35226
SMR:O35226 IntAct:O35226 MINT:MINT-2841145 STRING:O35226
PhosphoSite:O35226 REPRODUCTION-2DPAGE:IPI00345779 PaxDb:O35226
PRIDE:O35226 Ensembl:ENSMUST00000071664 Ensembl:ENSMUST00000107237
Ensembl:ENSMUST00000117355 GeneID:19185 KEGG:mmu:19185
UCSC:uc008qhr.1 UCSC:uc008qht.1 UCSC:uc008qhu.1 UCSC:uc008qhv.1
NextBio:295886 Bgee:O35226 Genevestigator:O35226
GermOnline:ENSMUSG00000005625 Uniprot:O35226
Length = 376
Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
Identities = 104/128 (81%), Positives = 114/128 (89%)
Query: 1 MRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLAMADSVEVLATLTSDVGRILSKL 60
MRNGDFLPTRLQAQQDAVN+VCHSKTRSNPENNVGL+ +A+ EVL TLT D GRILSKL
Sbjct: 16 MRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITLANDCEVLTTLTPDTGRILSKL 75
Query: 61 HQVQPNGNINFMTGIRIAHLALKHRQGKNHKMRIIAFVGSPVDLEERELTKLAKRLKKEK 120
H VQP G I F TGIR+AHLALKHRQGKNHKMRIIAFVGSPV+ E++L KLAKRLKKEK
Sbjct: 76 HTVQPKGKITFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPVEDNEKDLVKLAKRLKKEK 135
Query: 121 VNVDIVSF 128
VNVDI++F
Sbjct: 136 VNVDIINF 143
Score = 224 (83.9 bits), Expect = 2.9e-18, P = 2.9e-18
Identities = 41/51 (80%), Positives = 48/51 (94%)
Query: 204 TTSLNVDNSDFMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLAMA 254
+T + VDNS++MRNGDFLPTRLQAQQDAVN+VCHSKTRSNPENNVGL+ +A
Sbjct: 5 STMVCVDNSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITLA 55
>RGD|621109 [details] [associations]
symbol:Psmd4 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 4" species:10116 "Rattus norvegicus" [GO:0005737
"cytoplasm" evidence=IDA] [GO:0022624 "proteasome accessory
complex" evidence=ISO] [GO:0042044 "fluid transport" evidence=NAS]
InterPro:IPR002035 InterPro:IPR027040 PROSITE:PS50234 SMART:SM00327
Pfam:PF02809 RGD:621109 GO:GO:0005737 GO:GO:0000502
InterPro:IPR003903 SMART:SM00726 PROSITE:PS50330 PANTHER:PTHR10223
HOVERGEN:HBG000425 GO:GO:0042044 IPI:IPI00208471 UniGene:Rn.3830
HSSP:P55036 EMBL:AF175575 EMBL:BC060559 SMR:Q9ESH1 IntAct:Q9ESH1
STRING:Q9ESH1 UCSC:RGD:621109 InParanoid:Q9ESH1
Genevestigator:Q9ESH1 Uniprot:Q9ESH1
Length = 377
Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
Identities = 104/128 (81%), Positives = 114/128 (89%)
Query: 1 MRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLAMADSVEVLATLTSDVGRILSKL 60
MRNGDFLPTRLQAQQDAVN+VCHSKTRSNPENNVGL+ +A+ EVL TLT D GRILSKL
Sbjct: 16 MRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITLANDCEVLTTLTPDTGRILSKL 75
Query: 61 HQVQPNGNINFMTGIRIAHLALKHRQGKNHKMRIIAFVGSPVDLEERELTKLAKRLKKEK 120
H VQP G I F TGIR+AHLALKHRQGKNHKMRIIAFVGSPV+ E++L KLAKRLKKEK
Sbjct: 76 HTVQPKGKITFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPVEDNEKDLVKLAKRLKKEK 135
Query: 121 VNVDIVSF 128
VNVDI++F
Sbjct: 136 VNVDIINF 143
Score = 224 (83.9 bits), Expect = 3.0e-18, P = 3.0e-18
Identities = 41/51 (80%), Positives = 48/51 (94%)
Query: 204 TTSLNVDNSDFMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLAMA 254
+T + VDNS++MRNGDFLPTRLQAQQDAVN+VCHSKTRSNPENNVGL+ +A
Sbjct: 5 STMVCVDNSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITLA 55
>UNIPROTKB|O88321 [details] [associations]
symbol:Psmd4 "Proteasome (Prosome, macropain) 26S subunit,
non-ATPase, 4, isoform CRA_a" species:10116 "Rattus norvegicus"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IEA] InterPro:IPR002035 InterPro:IPR027040
PROSITE:PS50234 SMART:SM00327 Pfam:PF02809 RGD:621109 GO:GO:0000502
KO:K03029 InterPro:IPR003903 SMART:SM00726 PROSITE:PS50330
EMBL:CH474015 eggNOG:COG5148 OrthoDB:EOG4JQ3Z0 HOGENOM:HOG000165630
OMA:SDYQRNG PANTHER:PTHR10223 CTD:5710 GeneTree:ENSGT00530000064050
HOVERGEN:HBG000425 EMBL:AC130969 EMBL:AB017188 IPI:IPI00208471
RefSeq:NP_112621.1 UniGene:Rn.3830 HSSP:P55036 SMR:O88321
IntAct:O88321 STRING:O88321 Ensembl:ENSRNOT00000028589 GeneID:83499
KEGG:rno:83499 InParanoid:O88321 NextBio:615908
Genevestigator:O88321 Uniprot:O88321
Length = 380
Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
Identities = 104/128 (81%), Positives = 114/128 (89%)
Query: 1 MRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLAMADSVEVLATLTSDVGRILSKL 60
MRNGDFLPTRLQAQQDAVN+VCHSKTRSNPENNVGL+ +A+ EVL TLT D GRILSKL
Sbjct: 16 MRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITLANDCEVLTTLTPDTGRILSKL 75
Query: 61 HQVQPNGNINFMTGIRIAHLALKHRQGKNHKMRIIAFVGSPVDLEERELTKLAKRLKKEK 120
H VQP G I F TGIR+AHLALKHRQGKNHKMRIIAFVGSPV+ E++L KLAKRLKKEK
Sbjct: 76 HTVQPKGKITFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPVEDNEKDLVKLAKRLKKEK 135
Query: 121 VNVDIVSF 128
VNVDI++F
Sbjct: 136 VNVDIINF 143
Score = 224 (83.9 bits), Expect = 3.1e-18, P = 3.1e-18
Identities = 41/51 (80%), Positives = 48/51 (94%)
Query: 204 TTSLNVDNSDFMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLAMA 254
+T + VDNS++MRNGDFLPTRLQAQQDAVN+VCHSKTRSNPENNVGL+ +A
Sbjct: 5 STMVCVDNSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITLA 55
>UNIPROTKB|A6PVX3 [details] [associations]
symbol:PSMD4 "26S proteasome non-ATPase regulatory subunit
4" species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IEA]
InterPro:IPR002035 InterPro:IPR027040 SMART:SM00327 GO:GO:0005737
GO:GO:0000502 EMBL:AL592424 EMBL:AL391069 HOGENOM:HOG000165630
PANTHER:PTHR10223 HOVERGEN:HBG000425 UniGene:Hs.505059
HGNC:HGNC:9561 ChiTaRS:PSMD4 IPI:IPI00853509 STRING:A6PVX3
Ensembl:ENST00000437736 Uniprot:A6PVX3
Length = 203
Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
Identities = 104/128 (81%), Positives = 114/128 (89%)
Query: 1 MRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLAMADSVEVLATLTSDVGRILSKL 60
MRNGDFLPTRLQAQQDAVN+VCHSKTRSNPENNVGL+ +A+ EVL TLT D GRILSKL
Sbjct: 1 MRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITLANDCEVLTTLTPDTGRILSKL 60
Query: 61 HQVQPNGNINFMTGIRIAHLALKHRQGKNHKMRIIAFVGSPVDLEERELTKLAKRLKKEK 120
H VQP G I F TGIR+AHLALKHRQGKNHKMRIIAFVGSPV+ E++L KLAKRLKKEK
Sbjct: 61 HTVQPKGKITFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPVEDNEKDLVKLAKRLKKEK 120
Query: 121 VNVDIVSF 128
VNVDI++F
Sbjct: 121 VNVDIINF 128
Score = 196 (74.1 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 36/40 (90%), Positives = 39/40 (97%)
Query: 215 MRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLAMA 254
MRNGDFLPTRLQAQQDAVN+VCHSKTRSNPENNVGL+ +A
Sbjct: 1 MRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITLA 40
>ZFIN|ZDB-GENE-040625-104 [details] [associations]
symbol:psmd4a "proteasome (prosome, macropain) 26S
subunit, non-ATPase, 4a" species:7955 "Danio rerio" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] InterPro:IPR002035 InterPro:IPR027040 PROSITE:PS50234
SMART:SM00327 Pfam:PF02809 ZFIN:ZDB-GENE-040625-104 KO:K03029
InterPro:IPR003903 SMART:SM00726 PROSITE:PS50330
HOGENOM:HOG000165630 PANTHER:PTHR10223 GeneTree:ENSGT00530000064050
HOVERGEN:HBG000425 EMBL:CU855694 EMBL:BC071482 IPI:IPI00501777
RefSeq:NP_001002112.1 UniGene:Dr.77193 SMR:Q6IQC6 STRING:Q6IQC6
Ensembl:ENSDART00000104063 GeneID:415202 KEGG:dre:415202 CTD:415202
InParanoid:Q6IQC6 NextBio:20818871 Uniprot:Q6IQC6
Length = 372
Score = 542 (195.9 bits), Expect = 2.7e-52, P = 2.7e-52
Identities = 103/128 (80%), Positives = 116/128 (90%)
Query: 1 MRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLAMADSVEVLATLTSDVGRILSKL 60
MRNGDFLPTRLQAQQDAVN+VCHSKTRSNPENNVGL+ MA++ EVL TLT D GRILSKL
Sbjct: 16 MRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITMANNCEVLTTLTPDTGRILSKL 75
Query: 61 HQVQPNGNINFMTGIRIAHLALKHRQGKNHKMRIIAFVGSPVDLEERELTKLAKRLKKEK 120
H VQP G I+F TGIR+AHLALKHRQGKNHKMRI+AFVGSPV+ E++L K+AKRLKKEK
Sbjct: 76 HAVQPLGKISFCTGIRVAHLALKHRQGKNHKMRIVAFVGSPVEDNEKDLVKMAKRLKKEK 135
Query: 121 VNVDIVSF 128
VNVDI++F
Sbjct: 136 VNVDIINF 143
Score = 227 (85.0 bits), Expect = 1.2e-18, P = 1.2e-18
Identities = 42/51 (82%), Positives = 48/51 (94%)
Query: 204 TTSLNVDNSDFMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLAMA 254
+T + VDNS++MRNGDFLPTRLQAQQDAVN+VCHSKTRSNPENNVGL+ MA
Sbjct: 5 STMVCVDNSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITMA 55
>ZFIN|ZDB-GENE-050417-96 [details] [associations]
symbol:psmd4b "proteasome (prosome, macropain) 26S
subunit, non-ATPase, 4b" species:7955 "Danio rerio" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR002035 InterPro:IPR027040 PROSITE:PS50234 SMART:SM00327
Pfam:PF02809 ZFIN:ZDB-GENE-050417-96 GO:GO:0000502 KO:K03029
InterPro:IPR003903 SMART:SM00726 PROSITE:PS50330 eggNOG:COG5148
HOGENOM:HOG000165630 OMA:SDYQRNG PANTHER:PTHR10223
GeneTree:ENSGT00530000064050 HOVERGEN:HBG000425 EMBL:CU104697
EMBL:BC092825 IPI:IPI00495802 RefSeq:NP_001017624.1
UniGene:Dr.45739 SMR:Q561Y1 STRING:Q561Y1
Ensembl:ENSDART00000020654 GeneID:550287 KEGG:dre:550287 CTD:550287
InParanoid:Q561Y1 NextBio:20879548 Uniprot:Q561Y1
Length = 372
Score = 539 (194.8 bits), Expect = 5.6e-52, P = 5.6e-52
Identities = 102/128 (79%), Positives = 117/128 (91%)
Query: 1 MRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLAMADSVEVLATLTSDVGRILSKL 60
MRNGDFLPTRLQAQQDAVN++CHSKTRSNPENNVGL+ MA++ EVL TLT D GRILSKL
Sbjct: 16 MRNGDFLPTRLQAQQDAVNIICHSKTRSNPENNVGLITMANNCEVLTTLTPDTGRILSKL 75
Query: 61 HQVQPNGNINFMTGIRIAHLALKHRQGKNHKMRIIAFVGSPVDLEERELTKLAKRLKKEK 120
H VQP G I+F TGIR+AHLALKHRQGKNHKMRIIAFVGSPV+ +E++L K+AKRLKKEK
Sbjct: 76 HAVQPRGVISFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPVEDQEKDLVKMAKRLKKEK 135
Query: 121 VNVDIVSF 128
V+VDI++F
Sbjct: 136 VSVDIINF 143
Score = 226 (84.6 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 41/51 (80%), Positives = 48/51 (94%)
Query: 204 TTSLNVDNSDFMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLAMA 254
+T + VDNS++MRNGDFLPTRLQAQQDAVN++CHSKTRSNPENNVGL+ MA
Sbjct: 5 STMVCVDNSEYMRNGDFLPTRLQAQQDAVNIICHSKTRSNPENNVGLITMA 55
>FB|FBgn0015283 [details] [associations]
symbol:Rpn10 "Regulatory particle non-ATPase 10" species:7227
"Drosophila melanogaster" [GO:0004175 "endopeptidase activity"
evidence=IDA;NAS] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS;NAS] [GO:0000502 "proteasome complex"
evidence=NAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA;NAS] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0007059 "chromosome segregation"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR002035 InterPro:IPR027040 PROSITE:PS50234
SMART:SM00327 Pfam:PF02809 GO:GO:0007059 EMBL:AE014296
GO:GO:0006508 GO:GO:0006974 GO:GO:0004175 KO:K03029
InterPro:IPR003903 SMART:SM00726 PROSITE:PS50330 eggNOG:COG5148
GO:GO:0008540 BRENDA:3.4.25.1 OMA:SDYQRNG PANTHER:PTHR10223
GeneTree:ENSGT00530000064050 EMBL:S79502 EMBL:AY089333 PIR:S66528
RefSeq:NP_524204.1 ProteinModelPortal:P55035 SMR:P55035
DIP:DIP-22777N IntAct:P55035 MINT:MINT-1578442 STRING:P55035
PaxDb:P55035 EnsemblMetazoa:FBtr0078368 EnsemblMetazoa:FBtr0333453
GeneID:40388 KEGG:dme:Dmel_CG7619 CTD:40388 FlyBase:FBgn0015283
InParanoid:P55035 OrthoDB:EOG43R239 PhylomeDB:P55035
GenomeRNAi:40388 NextBio:818530 Bgee:P55035 GermOnline:CG7619
Uniprot:P55035
Length = 396
Score = 490 (177.5 bits), Expect = 8.8e-47, P = 8.8e-47
Identities = 93/127 (73%), Positives = 108/127 (85%)
Query: 2 RNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLAMADSVEVLATLTSDVGRILSKLH 61
RNGD+ PTRL Q+D +NLVC +K RSNPENNVGL+ ++++VEVLATLTSD GRI SK+H
Sbjct: 17 RNGDYFPTRLIVQRDGINLVCLTKLRSNPENNVGLMTLSNTVEVLATLTSDAGRIFSKMH 76
Query: 62 QVQPNGNINFMTGIRIAHLALKHRQGKNHKMRIIAFVGSPVDLEERELTKLAKRLKKEKV 121
VQP G IN +TGIRIAHL LKHRQGKNHKMRI+ FVGSP++ EE +L K AKRLKKEKV
Sbjct: 77 LVQPKGEINLLTGIRIAHLVLKHRQGKNHKMRIVVFVGSPINHEEGDLVKQAKRLKKEKV 136
Query: 122 NVDIVSF 128
NVDIVSF
Sbjct: 137 NVDIVSF 143
Score = 173 (66.0 bits), Expect = 8.3e-12, P = 8.3e-12
Identities = 31/51 (60%), Positives = 40/51 (78%)
Query: 204 TTSLNVDNSDFMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLAMA 254
+T + DNSDF RNGD+ PTRL Q+D +NLVC +K RSNPENNVGL+ ++
Sbjct: 5 STMICFDNSDFQRNGDYFPTRLIVQRDGINLVCLTKLRSNPENNVGLMTLS 55
>UNIPROTKB|A2A3N6 [details] [associations]
symbol:PIPSL "Putative PIP5K1A and PSMD4-like protein"
species:9606 "Homo sapiens" [GO:0016307 "phosphatidylinositol
phosphate kinase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR002035 InterPro:IPR002498 Pfam:PF01504
PROSITE:PS50234 PROSITE:PS51455 SMART:SM00327 GO:GO:0005737
PROSITE:PS50330 GO:GO:0046854 InterPro:IPR016034 SMART:SM00330
InterPro:IPR023610 PANTHER:PTHR23086 GO:GO:0016307 eggNOG:COG5148
EMBL:AL365510 IPI:IPI00419692 UniGene:Hs.149255
ProteinModelPortal:A2A3N6 SMR:A2A3N6 STRING:A2A3N6 PaxDb:A2A3N6
PRIDE:A2A3N6 UCSC:uc009xuj.2 GeneCards:GC10M095707 HGNC:HGNC:23733
neXtProt:NX_A2A3N6 InParanoid:A2A3N6 Genevestigator:A2A3N6
Uniprot:A2A3N6
Length = 862
Score = 494 (179.0 bits), Expect = 1.9e-46, P = 1.9e-46
Identities = 96/128 (75%), Positives = 106/128 (82%)
Query: 1 MRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLAMADSVEVLATLTSDVGRILSKL 60
M NGDFLPTRLQAQQDAVN VCHSKTRSNPENNVGL+ + + EVL TLT D GRILSKL
Sbjct: 501 MGNGDFLPTRLQAQQDAVNTVCHSKTRSNPENNVGLITLDNDCEVLTTLTPDTGRILSKL 560
Query: 61 HQVQPNGNINFMTGIRIAHLALKHRQGKNHKMRIIAFVGSPVDLEERELTKLAKRLKKEK 120
H VQP G I F GI +AHLALKHRQG NHK+RIIAFVG+PV+ E+ L KLAK LKKEK
Sbjct: 561 HTVQPKGKITFCMGIHVAHLALKHRQGNNHKIRIIAFVGNPVEDNEKNLVKLAKCLKKEK 620
Query: 121 VNVDIVSF 128
VNVDI++F
Sbjct: 621 VNVDIINF 628
Score = 227 (85.0 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 49/74 (66%), Positives = 56/74 (75%)
Query: 180 GSIPPPDLTSLVRCPHVSHVVAMITTSLNVDNSDFMRNGDFLPTRLQAQQDAVNLVCHSK 239
GS P PD + P V + M+TTS VDNS++M NGDFLPTRLQAQQDAVN VCHSK
Sbjct: 472 GS-PTPDPSF---SPLVEETLQMLTTS--VDNSEYMGNGDFLPTRLQAQQDAVNTVCHSK 525
Query: 240 TRSNPENNVGLLAM 253
TRSNPENNVGL+ +
Sbjct: 526 TRSNPENNVGLITL 539
>WB|WBGene00004466 [details] [associations]
symbol:rpn-10 species:6239 "Caenorhabditis elegans"
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0007283
"spermatogenesis" evidence=IGI;IMP] [GO:0042006 "masculinization of
hermaphroditic germ-line" evidence=IMP] [GO:0008340 "determination
of adult lifespan" evidence=IMP] [GO:0040027 "negative regulation
of vulval development" evidence=IMP] [GO:0016246 "RNA interference"
evidence=IMP] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IGI;IMP] InterPro:IPR002035 InterPro:IPR027040
SMART:SM00327 Pfam:PF02809 GO:GO:0008340 GO:GO:0016246
GO:GO:0007283 GO:GO:0006511 KO:K03029 InterPro:IPR003903
SMART:SM00726 PROSITE:PS50330 GO:GO:0040027 EMBL:FO080112
GO:GO:0042006 eggNOG:COG5148 HOGENOM:HOG000165630 PANTHER:PTHR10223
GeneTree:ENSGT00530000064050 OMA:HRQNKVQ RefSeq:NP_492809.1
ProteinModelPortal:O61742 SMR:O61742 IntAct:O61742 MINT:MINT-210565
STRING:O61742 PaxDb:O61742 EnsemblMetazoa:B0205.3.1
EnsemblMetazoa:B0205.3.2 GeneID:172977 KEGG:cel:CELE_B0205.3
UCSC:B0205.3.1 CTD:172977 WormBase:B0205.3 InParanoid:O61742
NextBio:877763 Uniprot:O61742
Length = 346
Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
Identities = 77/129 (59%), Positives = 106/129 (82%)
Query: 1 MRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLAMADSVEVLATLTSDVGRILSKL 60
MRNGDF PTRLQ+QQDAVNLV K R+NPEN VG+L+MA+SV+VL++L+++ GR++ K
Sbjct: 16 MRNGDFQPTRLQSQQDAVNLVTQCKLRANPENAVGILSMANSVQVLSSLSTEQGRLMMKN 75
Query: 61 HQVQPNGNINFMTGIRIAHLALKHRQGKNHKMRIIAFVGSPVD-LEERELTKLAKRLKKE 119
H ++P G NF+ GI+IAHLALKHRQ +NHKMR++ F+GSP++ +E EL K+AK++KKE
Sbjct: 76 HSIEPFGKCNFIAGIKIAHLALKHRQNRNHKMRVVLFIGSPLEEIEMNELVKIAKKMKKE 135
Query: 120 KVNVDIVSF 128
KV D++ F
Sbjct: 136 KVLCDVIMF 144
Score = 182 (69.1 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 35/51 (68%), Positives = 43/51 (84%)
Query: 204 TTSLNVDNSDFMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLAMA 254
+T + VDNS++MRNGDF PTRLQ+QQDAVNLV K R+NPEN VG+L+MA
Sbjct: 5 STMICVDNSEYMRNGDFQPTRLQSQQDAVNLVTQCKLRANPENAVGILSMA 55
>TAIR|locus:2121269 [details] [associations]
symbol:RPN10 "regulatory particle non-ATPase 10"
species:3702 "Arabidopsis thaliana" [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=ISS;IDA]
[GO:0000502 "proteasome complex" evidence=IDA;TAS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0005634 "nucleus" evidence=TAS] [GO:0030163 "protein catabolic
process" evidence=TAS] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] [GO:0009555 "pollen development"
evidence=IMP] [GO:0009651 "response to salt stress"
evidence=RCA;IMP] [GO:0009733 "response to auxin stimulus"
evidence=IMP] [GO:0009735 "response to cytokinin stimulus"
evidence=IEP;RCA;IMP] [GO:0009737 "response to abscisic acid
stimulus" evidence=IMP] [GO:0009744 "response to sucrose stimulus"
evidence=IMP] [GO:0010029 "regulation of seed germination"
evidence=IMP] [GO:0010150 "leaf senescence" evidence=IMP]
[GO:0048366 "leaf development" evidence=IMP] [GO:0048455 "stamen
formation" evidence=IMP] [GO:0048528 "post-embryonic root
development" evidence=IMP] [GO:0048767 "root hair elongation"
evidence=RCA;IMP] [GO:0016020 "membrane" evidence=IDA] [GO:0009408
"response to heat" evidence=IMP] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=RCA;IMP]
[GO:0043248 "proteasome assembly" evidence=RCA;IMP] [GO:0051788
"response to misfolded protein" evidence=RCA;IMP] [GO:0080129
"proteasome core complex assembly" evidence=RCA;IMP] [GO:0005829
"cytosol" evidence=IDA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006096 "glycolysis" evidence=RCA] [GO:0006623 "protein
targeting to vacuole" evidence=RCA] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0006833 "water transport"
evidence=RCA] [GO:0006972 "hyperosmotic response" evidence=RCA]
[GO:0007010 "cytoskeleton organization" evidence=RCA] [GO:0007030
"Golgi organization" evidence=RCA] [GO:0009266 "response to
temperature stimulus" evidence=RCA] [GO:0009407 "toxin catabolic
process" evidence=RCA] [GO:0009853 "photorespiration" evidence=RCA]
[GO:0010498 "proteasomal protein catabolic process" evidence=RCA]
[GO:0046686 "response to cadmium ion" evidence=RCA] [GO:0001653
"peptide receptor activity" evidence=IDA] InterPro:IPR002035
InterPro:IPR027040 PROSITE:PS50234 SMART:SM00327 Pfam:PF02809
GO:GO:0005829 GO:GO:0009737 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0009735 GO:GO:0009733 GO:GO:0043161
GO:GO:0016020 GO:GO:0009555 GO:GO:0009651 GO:GO:0009744
GO:GO:0010150 GO:GO:0006974 GO:GO:0048767 GO:GO:0009408
GO:GO:0000502 GO:GO:0043248 GO:GO:0010029 KO:K03029
InterPro:IPR003903 SMART:SM00726 PROSITE:PS50330 EMBL:AL035656
EMBL:AL161593 GO:GO:0051788 EMBL:AL035540 GO:GO:0048528
GO:GO:0001653 eggNOG:COG5148 EMBL:U33269 EMBL:AF360319
EMBL:AY113889 IPI:IPI00542443 PIR:T05691 RefSeq:NP_195575.1
UniGene:At.1553 ProteinModelPortal:P55034 SMR:P55034 IntAct:P55034
STRING:P55034 PaxDb:P55034 PRIDE:P55034 EnsemblPlants:AT4G38630.1
GeneID:830019 KEGG:ath:AT4G38630 TAIR:At4g38630
HOGENOM:HOG000165630 InParanoid:P55034 OMA:SDYQRNG PhylomeDB:P55034
ProtClustDB:CLSN2685445 Genevestigator:P55034 GermOnline:AT4G38630
GO:GO:0048455 PANTHER:PTHR10223 Uniprot:P55034
Length = 386
Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
Identities = 73/129 (56%), Positives = 94/129 (72%)
Query: 1 MRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLAMADS-VEVLATLTSDVGRILSK 59
MRNGD+ P+RLQAQ +AVNL+C +KT+SNPEN VG+L MA V VL T TSD+G+IL+
Sbjct: 16 MRNGDYSPSRLQAQTEAVNLLCGAKTQSNPENTVGILTMAGKGVRVLTTPTSDLGKILAC 75
Query: 60 LHQVQPNGNINFMTGIRIAHLALKHRQGKNHKMRIIAFVGSPVDLEERELTKLAKRLKKE 119
+H + G IN I+IA LALKHRQ KN + RII F GSP+ E++ L + KRLKK
Sbjct: 76 MHGLDVGGEINLTAAIQIAQLALKHRQNKNQRQRIIVFAGSPIKYEKKALEIVGKRLKKN 135
Query: 120 KVNVDIVSF 128
V++DIV+F
Sbjct: 136 SVSLDIVNF 144
Score = 180 (68.4 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 33/52 (63%), Positives = 44/52 (84%)
Query: 205 TSLNVDNSDFMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLAMAEK 256
T + +DNS++MRNGD+ P+RLQAQ +AVNL+C +KT+SNPEN VG+L MA K
Sbjct: 6 TMICIDNSEWMRNGDYSPSRLQAQTEAVNLLCGAKTQSNPENTVGILTMAGK 57
>UNIPROTKB|H9KYX1 [details] [associations]
symbol:H9KYX1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0060326 "cell chemotaxis" evidence=IEA]
[GO:0072661 "protein targeting to plasma membrane" evidence=IEA]
[GO:0097178 "ruffle assembly" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005847 "mRNA cleavage and polyadenylation
specificity factor complex" evidence=IEA] [GO:0008654 "phospholipid
biosynthetic process" evidence=IEA] [GO:0010761 "fibroblast
migration" evidence=IEA] [GO:0016308
"1-phosphatidylinositol-4-phosphate 5-kinase activity"
evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0019900
"kinase binding" evidence=IEA] [GO:0030027 "lamellipodium"
evidence=IEA] [GO:0031532 "actin cytoskeleton reorganization"
evidence=IEA] [GO:0032587 "ruffle membrane" evidence=IEA]
[GO:0032863 "activation of Rac GTPase activity" evidence=IEA]
[GO:0048041 "focal adhesion assembly" evidence=IEA]
InterPro:IPR002035 InterPro:IPR002498 Pfam:PF01504 PROSITE:PS51455
SMART:SM00327 Pfam:PF02809 InterPro:IPR003903 SMART:SM00726
PROSITE:PS50330 GO:GO:0046854 InterPro:IPR016034 SMART:SM00330
InterPro:IPR023610 PANTHER:PTHR23086 GeneTree:ENSGT00690000101870
GO:GO:0016307 EMBL:AADN02010480 EMBL:AADN02010481 EMBL:AADN02010482
EMBL:AADN02010483 Ensembl:ENSGALT00000001176 OMA:MADNCEV
Uniprot:H9KYX1
Length = 866
Score = 368 (134.6 bits), Expect = 8.2e-33, P = 8.2e-33
Identities = 78/120 (65%), Positives = 91/120 (75%)
Query: 11 LQAQQDAVNLVCHSKTRSNPENNV-GLLAMADS-VEVLATLTSDVGRILSKLHQVQPNGN 68
LQ + A+N V S+T + + GL+ + S EVL TLT D GRILSKLH VQP G
Sbjct: 515 LQRLESALNRVPLSRTPQHSREPMRGLITLGHSNCEVLTTLTPDTGRILSKLHTVQPKGK 574
Query: 69 INFMTGIRIAHLALKHRQGKNHKMRIIAFVGSPVDLEERELTKLAKRLKKEKVNVDIVSF 128
I F TGIR+AHLALKHRQGKNHKMRIIAFVGSPV+ E++L KLAKRLKKEKVNVDI++F
Sbjct: 575 ITFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPVEDNEKDLVKLAKRLKKEKVNVDIINF 634
>DICTYBASE|DDB_G0275775 [details] [associations]
symbol:psmD4 "ubiquitin interacting motif (UIM)
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0000502
"proteasome complex" evidence=IEA;ISS] InterPro:IPR002035
InterPro:IPR027040 PROSITE:PS50234 SMART:SM00327
dictyBase:DDB_G0275775 GO:GO:0005634 GenomeReviews:CM000151_GR
EMBL:AAFI02000013 GO:GO:0004175 GO:GO:0000502 GO:GO:0006511
KO:K03029 InterPro:IPR003903 SMART:SM00726 PROSITE:PS50330
eggNOG:COG5148 OMA:SDYQRNG PANTHER:PTHR10223 RefSeq:XP_643477.1
STRING:Q553E0 EnsemblProtists:DDB0232981 GeneID:8620058
KEGG:ddi:DDB_G0275775 ProtClustDB:CLSZ2515584 Uniprot:Q553E0
Length = 349
Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 74/150 (49%), Positives = 99/150 (66%)
Query: 1 MRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLAMADSV-EVLATLTSDVGRILSK 59
MRNGDF P+R +AQ+DAVNL+C SKT+SNPE+ V +++MA EVL TLT ++ +ILS
Sbjct: 16 MRNGDFTPSRSEAQKDAVNLICASKTQSNPESAVSIMSMAGKKPEVLVTLTQELSKILSG 75
Query: 60 LHQVQPNGNINFMTGIRIAHLALKHRQGKNHKMRIIAFVGSPVDLEERELTKLAKRLKKE 119
+++ NG I+F T ++IA LAL+HRQ + RIIAFVGSP+ + EL +LAKRLKK
Sbjct: 76 AQELKINGKIDFSTTMQIAQLALRHRQNNHQHPRIIAFVGSPLKETKEELIQLAKRLKKN 135
Query: 120 KVNVDIVSFXXXXXXXXXXXXXXXXVQNTD 149
V VDI++F V N D
Sbjct: 136 GVAVDIINFGEVTENSDKLEAFINDVNNND 165
Score = 168 (64.2 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 31/52 (59%), Positives = 44/52 (84%)
Query: 205 TSLNVDNSDFMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLAMAEK 256
T + +DNS++MRNGDF P+R +AQ+DAVNL+C SKT+SNPE+ V +++MA K
Sbjct: 6 TIVCLDNSEWMRNGDFTPSRSEAQKDAVNLICASKTQSNPESAVSIMSMAGK 57
>UNIPROTKB|H9KYX2 [details] [associations]
symbol:H9KYX2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005847 "mRNA cleavage and polyadenylation
specificity factor complex" evidence=IEA] [GO:0008654 "phospholipid
biosynthetic process" evidence=IEA] [GO:0010761 "fibroblast
migration" evidence=IEA] [GO:0016308
"1-phosphatidylinositol-4-phosphate 5-kinase activity"
evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0019900
"kinase binding" evidence=IEA] [GO:0030027 "lamellipodium"
evidence=IEA] [GO:0031532 "actin cytoskeleton reorganization"
evidence=IEA] [GO:0032587 "ruffle membrane" evidence=IEA]
[GO:0032863 "activation of Rac GTPase activity" evidence=IEA]
[GO:0048041 "focal adhesion assembly" evidence=IEA] [GO:0060326
"cell chemotaxis" evidence=IEA] [GO:0072661 "protein targeting to
plasma membrane" evidence=IEA] [GO:0097178 "ruffle assembly"
evidence=IEA] InterPro:IPR027040 Pfam:PF02809 InterPro:IPR003903
SMART:SM00726 PROSITE:PS50330 GeneTree:ENSGT00690000101870
PANTHER:PTHR10223 EMBL:AADN02010480 EMBL:AADN02010481
EMBL:AADN02010482 EMBL:AADN02010483 Ensembl:ENSGALT00000001187
Uniprot:H9KYX2
Length = 318
Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 68/85 (80%), Positives = 74/85 (87%)
Query: 44 EVLATLTSDVGRILSKLHQVQPNGNINFMTGIRIAHLALKHRQGKNHKMRIIAFVGSPVD 103
EVL TLT D GRILSKLH VQP G I F TGIR+AHLALKHRQGKNHKMRIIAFVGSPV+
Sbjct: 3 EVLTTLTPDTGRILSKLHTVQPKGKITFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPVE 62
Query: 104 LEERELTKLAKRLKKEKVNVDIVSF 128
E++L KLAKRLKKEKVNVDI++F
Sbjct: 63 DNEKDLVKLAKRLKKEKVNVDIINF 87
>CGD|CAL0005551 [details] [associations]
symbol:RPN10 species:5476 "Candida albicans" [GO:0031593
"polyubiquitin binding" evidence=IEA] [GO:0005198 "structural
molecule activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0042177 "negative regulation of protein catabolic
process" evidence=IEA] InterPro:IPR002035 InterPro:IPR027040
PROSITE:PS50234 SMART:SM00327 CGD:CAL0005551 KO:K03029
InterPro:IPR003903 SMART:SM00726 PROSITE:PS50330 EMBL:AACQ01000107
EMBL:AACQ01000110 eggNOG:COG5148 PANTHER:PTHR10223
RefSeq:XP_714135.1 RefSeq:XP_714273.1 ProteinModelPortal:Q59X29
STRING:Q59X29 GeneID:3644080 GeneID:3644200 KEGG:cal:CaO19.11583
KEGG:cal:CaO19.4102 Uniprot:Q59X29
Length = 279
Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 75/161 (46%), Positives = 100/161 (62%)
Query: 1 MRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLAMADS-VEVLATLTSDVGRILSK 59
MRNGDFL +R +AQ A + +K SNPEN VGLLA S +VL+TLT+D G+IL+
Sbjct: 16 MRNGDFLTSRYEAQLTATEFIFQNKINSNPENTVGLLAYGGSGPQVLSTLTTDFGKILAG 75
Query: 60 LHQVQPNGNINFMTGIRIAHLALKHRQGKNHKMRIIAFVGSPVDLEERELTKLAKRLKKE 119
+H+ + G NF +GI++A LALKHRQ K + RII FVGSP+ E+EL KLAK++KK
Sbjct: 76 VHETKIQGENNFSSGIQVAALALKHRQNKVQQQRIIIFVGSPIKESEKELEKLAKKMKKN 135
Query: 120 KVNVDIVSFXXXXXXXXXXXXXXXXVQNTDRPNCHYNLTLS 160
V VDI++F + N D N H +T+S
Sbjct: 136 NVAVDIINFGEEGVNTAKLERFQSTINNHD--NSHL-VTIS 173
Score = 138 (53.6 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 26/48 (54%), Positives = 34/48 (70%)
Query: 205 TSLNVDNSDFMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLA 252
T + +DNS++MRNGDFL +R +AQ A + +K SNPEN VGLLA
Sbjct: 6 TMIAIDNSEYMRNGDFLTSRYEAQLTATEFIFQNKINSNPENTVGLLA 53
>POMBASE|SPAC637.10c [details] [associations]
symbol:rpn10 "19S proteasome regulatory subunit Rpn10"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IC]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISO] [GO:0042177 "negative regulation of protein catabolic
process" evidence=IMP] [GO:0043130 "ubiquitin binding"
evidence=ISM] InterPro:IPR002035 InterPro:IPR027040 PROSITE:PS50234
SMART:SM00327 PomBase:SPAC637.10c GO:GO:0005829 GO:GO:0005634
GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0006511
GO:GO:0042177 KO:K03029 InterPro:IPR003903 PROSITE:PS50330
GO:GO:0043130 eggNOG:COG5148 GO:GO:0008540 HOGENOM:HOG000165630
PANTHER:PTHR10223 PIR:T39002 RefSeq:NP_594628.1 PDB:2X5N
PDBsum:2X5N ProteinModelPortal:O94444 IntAct:O94444 STRING:O94444
PRIDE:O94444 EnsemblFungi:SPAC637.10c.1 GeneID:2543682
KEGG:spo:SPAC637.10c OMA:HRQNKVQ OrthoDB:EOG4GXJX7 NextBio:20804688
Uniprot:O94444
Length = 243
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 63/127 (49%), Positives = 89/127 (70%)
Query: 1 MRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLAMAD-SVEVLATLTSDVGRILSK 59
M NGD++PTR +AQ+D V+++ + K NPEN GL+ + D S +VL+TLT D G+ LS
Sbjct: 16 MINGDYIPTRFEAQKDTVHMIFNQKINDNPENMCGLMTIGDNSPQVLSTLTRDYGKFLSA 75
Query: 60 LHQVQPNGNINFMTGIRIAHLALKHRQGKNHKMRIIAFVGSPVDLEERELTKLAKRLKKE 119
+H + GN F GI+IA LALKHR+ K + RI+AFVGSP+ +E+ L +LAKR+KK
Sbjct: 76 MHDLPVRGNAKFGDGIQIAQLALKHRENKIQRQRIVAFVGSPIVEDEKNLIRLAKRMKKN 135
Query: 120 KVNVDIV 126
V +DI+
Sbjct: 136 NVAIDII 142
Score = 134 (52.2 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 22/51 (43%), Positives = 37/51 (72%)
Query: 205 TSLNVDNSDFMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLAMAE 255
T + +DNS++M NGD++PTR +AQ+D V+++ + K NPEN GL+ + +
Sbjct: 6 TMILIDNSEWMINGDYIPTRFEAQKDTVHMIFNQKINDNPENMCGLMTIGD 56
>UNIPROTKB|G4MS79 [details] [associations]
symbol:MGG_04506 "26S proteasome non-ATPase regulatory
subunit 4" species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002035 InterPro:IPR027040 PROSITE:PS50234
SMART:SM00327 GO:GO:0000502 KO:K03029 InterPro:IPR003903
SMART:SM00726 PROSITE:PS50330 EMBL:CM001231 PANTHER:PTHR10223
RefSeq:XP_003710949.1 ProteinModelPortal:G4MS79
EnsemblFungi:MGG_04506T0 GeneID:2678171 KEGG:mgr:MGG_04506
Uniprot:G4MS79
Length = 294
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 65/130 (50%), Positives = 86/130 (66%)
Query: 2 RNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLAMADS-VEVLATLTSDVGRILSKL 60
RNGD+ PTR AQ DAVN++ T NPE++VGL++M EVL TLTSD G+IL L
Sbjct: 17 RNGDYTPTRFDAQADAVNVLFQHVTNGNPESSVGLMSMGGKDPEVLVTLTSDQGKILEGL 76
Query: 61 HQVQP--NGNINFMTGIRIAHLALKHRQGKNHKMRIIAFVGSPVDLEERELTKLAKRLKK 118
H+ + +G+ + T I++A LALKHRQ + RI+AFV SPV E++ L +LA +LKK
Sbjct: 77 HRTKKKVSGSSHLATAIQVASLALKHRQNTTQRTRIVAFVCSPVSDEQKALVQLAGKLKK 136
Query: 119 EKVNVDIVSF 128
V VD V F
Sbjct: 137 NNVTVDFVLF 146
Score = 136 (52.9 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 26/48 (54%), Positives = 34/48 (70%)
Query: 209 VDNSDFMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLAMAEK 256
VDNS+ RNGD+ PTR AQ DAVN++ T NPE++VGL++M K
Sbjct: 10 VDNSESSRNGDYTPTRFDAQADAVNVLFQHVTNGNPESSVGLMSMGGK 57
>SGD|S000001243 [details] [associations]
symbol:RPN10 "Non-ATPase base subunit of the regulatory
particle of the proteasome" species:4932 "Saccharomyces cerevisiae"
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA;IDA;IPI] [GO:0000502 "proteasome complex"
evidence=IEA;IMP] [GO:0005198 "structural molecule activity"
evidence=IMP] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA;IMP] [GO:0031593 "polyubiquitin binding"
evidence=IDA] InterPro:IPR002035 InterPro:IPR027040 PROSITE:PS50234
SMART:SM00327 SGD:S000001243 GO:GO:0005198 EMBL:BK006934
GO:GO:0006511 EMBL:U00030 GO:GO:0031593 RefSeq:NP_012070.3
GeneID:856607 KEGG:sce:YHR200W KO:K03029 InterPro:IPR003903
SMART:SM00726 PROSITE:PS50330 eggNOG:COG5148 GO:GO:0008540 PDB:4B4T
PDBsum:4B4T HOGENOM:HOG000165630 PANTHER:PTHR10223
GeneTree:ENSGT00530000064050 OMA:HRQNKVQ OrthoDB:EOG4GXJX7
EMBL:D78022 EMBL:AY558289 PIR:S46677 RefSeq:NP_012072.3
ProteinModelPortal:P38886 SMR:P38886 DIP:DIP-2100N IntAct:P38886
MINT:MINT-557564 STRING:P38886 PaxDb:P38886 PeptideAtlas:P38886
EnsemblFungi:YHR200W GeneID:856609 KEGG:sce:YHR202W NextBio:982517
Genevestigator:P38886 GermOnline:YHR200W Uniprot:P38886
Length = 268
Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 67/160 (41%), Positives = 90/160 (56%)
Query: 2 RNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLAMADS-VEVLATLTSDVGRILSKL 60
RNGDF TR +AQ D+V + +K SNPEN VGL++ A + VL+T T++ G+IL+ L
Sbjct: 17 RNGDFPRTRFEAQIDSVEFIFQAKRNSNPENTVGLISGAGANPRVLSTFTAEFGKILAGL 76
Query: 61 HQVQPNGNINFMTGIRIAHLALKHRQGKNHKMRIIAFVGSPVDLEERELTKLAKRLKKEK 120
H Q G ++ T ++IA L LKHRQ K RI+AFV SP+ EL +LAK LKK
Sbjct: 77 HDTQIEGKLHMATALQIAQLTLKHRQNKVQHQRIVAFVCSPISDSRDELIRLAKTLKKNN 136
Query: 121 VNVDIVSFXXXXXXXXXXXXXXXXVQNTDRPNCHYNLTLS 160
V VDI++F V N H LT++
Sbjct: 137 VAVDIINFGEIEQNTELLDEFIAAVNNPQEETSHL-LTVT 175
Score = 132 (51.5 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 26/50 (52%), Positives = 35/50 (70%)
Query: 205 TSLNVDNSDFMRNGDFLPTRLQAQQDAVNLVCHSKTRSNPENNVGLLAMA 254
T L +DNS++ RNGDF TR +AQ D+V + +K SNPEN VGL++ A
Sbjct: 6 TVLVIDNSEYSRNGDFPRTRFEAQIDSVEFIFQAKRNSNPENTVGLISGA 55
>UNIPROTKB|H0Y3Y9 [details] [associations]
symbol:PSMD4 "26S proteasome non-ATPase regulatory subunit
4" species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IEA]
InterPro:IPR027040 Pfam:PF02809 InterPro:IPR003903 SMART:SM00726
PROSITE:PS50330 EMBL:AL592424 EMBL:AL391069 PANTHER:PTHR10223
HGNC:HGNC:9561 ChiTaRS:PSMD4 ProteinModelPortal:H0Y3Y9 PRIDE:H0Y3Y9
Ensembl:ENST00000445776 Bgee:H0Y3Y9 Uniprot:H0Y3Y9
Length = 193
Score = 113 (44.8 bits), Expect = 7.9e-05, P = 7.9e-05
Identities = 22/30 (73%), Positives = 27/30 (90%)
Query: 99 GSPVDLEERELTKLAKRLKKEKVNVDIVSF 128
GSPV+ E++L KLAKRLKKEKVNVDI++F
Sbjct: 2 GSPVEDNEKDLVKLAKRLKKEKVNVDIINF 31
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.130 0.371 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 256 240 0.00093 113 3 11 22 0.43 33
32 0.44 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 25
No. of states in DFA: 547 (58 KB)
Total size of DFA: 154 KB (2093 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.87u 0.09s 20.96t Elapsed: 00:00:13
Total cpu time: 20.87u 0.09s 20.96t Elapsed: 00:00:17
Start: Thu Aug 15 12:54:33 2013 End: Thu Aug 15 12:54:50 2013