BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14668
(266 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9NAH4|DENR_CAEEL Density-regulated protein homolog OS=Caenorhabditis elegans
GN=Y47D3A.21 PE=3 SV=1
Length = 192
Score = 85.1 bits (209), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/55 (70%), Positives = 46/55 (83%)
Query: 142 VASKFFGTRFACGSSVTGDDEIVIQGDVKDDLFDVIPEKWPEIDEDFIEDLGDLK 196
VASK F +FACGSSVTG DEIVIQGDVKDDL D+IPEKW ++ ++ I+DLGD K
Sbjct: 137 VASKLFAQKFACGSSVTGADEIVIQGDVKDDLLDLIPEKWKQVTDEQIDDLGDKK 191
>sp|Q9CQJ6|DENR_MOUSE Density-regulated protein OS=Mus musculus GN=Denr PE=2 SV=1
Length = 198
Score = 84.0 bits (206), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%)
Query: 143 ASKFFGTRFACGSSVTGDDEIVIQGDVKDDLFDVIPEKWPEIDEDFIEDLGDLKS 197
A +FF +F+CG+SVTG+DEI+IQGD DD+ DVI EKWPE+D+D IEDLG++K
Sbjct: 144 AQRFFAQKFSCGASVTGEDEIIIQGDFTDDIIDVIQEKWPEVDDDSIEDLGEVKK 198
>sp|O43583|DENR_HUMAN Density-regulated protein OS=Homo sapiens GN=DENR PE=1 SV=2
Length = 198
Score = 84.0 bits (206), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 46/54 (85%)
Query: 143 ASKFFGTRFACGSSVTGDDEIVIQGDVKDDLFDVIPEKWPEIDEDFIEDLGDLK 196
A +FF +F+CG+SVTG+DEI+IQGD DD+ DVI EKWPE+D+D IEDLG++K
Sbjct: 144 AQRFFAQKFSCGASVTGEDEIIIQGDFTDDIIDVIQEKWPEVDDDSIEDLGEVK 197
>sp|Q2HJ47|DENR_BOVIN Density-regulated protein OS=Bos taurus GN=DENR PE=2 SV=1
Length = 198
Score = 84.0 bits (206), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%)
Query: 143 ASKFFGTRFACGSSVTGDDEIVIQGDVKDDLFDVIPEKWPEIDEDFIEDLGDLKS 197
A +FF +F+CG+SVTG+DEI+IQGD DD+ DVI EKWPE+D+D IEDLG++K
Sbjct: 144 AQRFFAQKFSCGASVTGEDEIIIQGDFTDDIIDVIQEKWPEVDDDSIEDLGEVKK 198
>sp|Q6GLZ1|DENR_XENLA Density-regulated protein OS=Xenopus laevis GN=denr PE=2 SV=1
Length = 198
Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%)
Query: 143 ASKFFGTRFACGSSVTGDDEIVIQGDVKDDLFDVIPEKWPEIDEDFIEDLGDLKS 197
A +FF +F+CG+SVTG+DEI+IQGD DD+ DVI EKWPE+D+D IEDLG++K
Sbjct: 144 AQRFFAQKFSCGASVTGEDEIIIQGDFTDDIIDVIQEKWPEVDDDSIEDLGEVKK 198
>sp|Q6DFN7|DENR_XENTR Density-regulated protein OS=Xenopus tropicalis GN=denr PE=2 SV=1
Length = 200
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%)
Query: 143 ASKFFGTRFACGSSVTGDDEIVIQGDVKDDLFDVIPEKWPEIDEDFIEDLGDLKS 197
A +FF +F+CG+SVTG+DEI+IQGD DD+ DVI EKWPE+D+D IEDLG++K
Sbjct: 146 AQRFFAQKFSCGASVTGEDEIIIQGDFTDDIIDVIQEKWPEVDDDSIEDLGEVKK 200
>sp|Q5ZJ39|DENR_CHICK Density-regulated protein OS=Gallus gallus GN=DENR PE=2 SV=1
Length = 198
Score = 83.6 bits (205), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 46/55 (83%)
Query: 143 ASKFFGTRFACGSSVTGDDEIVIQGDVKDDLFDVIPEKWPEIDEDFIEDLGDLKS 197
A +FF +F+CG+SVTG+DEI+IQGD DD+ DVI EKWPE+D+D IEDLG++K
Sbjct: 144 AQRFFAQKFSCGASVTGEDEIIIQGDFTDDIIDVIQEKWPEVDDDSIEDLGEVKK 198
>sp|Q6DH65|DENR_DANRE Density-regulated protein OS=Danio rerio GN=denr PE=1 SV=1
Length = 208
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 45/55 (81%)
Query: 143 ASKFFGTRFACGSSVTGDDEIVIQGDVKDDLFDVIPEKWPEIDEDFIEDLGDLKS 197
A +FF +F+CG+SVT +DEI+IQGD DD+ DVI EKWPE+D+D I+DLG++K
Sbjct: 154 AQRFFAQKFSCGASVTAEDEIIIQGDFTDDIIDVIQEKWPEVDDDSIDDLGEVKK 208
>sp|Q5RFP5|DENR_PONAB Density-regulated protein OS=Pongo abelii GN=DENR PE=2 SV=1
Length = 198
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 45/54 (83%)
Query: 143 ASKFFGTRFACGSSVTGDDEIVIQGDVKDDLFDVIPEKWPEIDEDFIEDLGDLK 196
A +FF +F+CG+SVTG+DEI+IQGD DD+ DVI EKWPE+ +D IEDLG++K
Sbjct: 144 AQRFFAQKFSCGASVTGEDEIIIQGDFTDDIIDVIQEKWPEVVDDSIEDLGEVK 197
>sp|A4QVI3|DENR_MAGO7 Translation machinery-associated protein 22 OS=Magnaporthe oryzae
(strain 70-15 / ATCC MYA-4617 / FGSC 8958) GN=TMA22 PE=3
SV=2
Length = 201
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 41/64 (64%), Gaps = 4/64 (6%)
Query: 144 SKFFGTRFACGSSVT----GDDEIVIQGDVKDDLFDVIPEKWPEIDEDFIEDLGDLKSPT 199
+K FG +FA GSSVT G +EIV+QGDV D++ + I EK+ ++ ED IE + D K+
Sbjct: 134 AKDFGKKFATGSSVTKVASGGEEIVVQGDVSDEIKEFIVEKYKDVPEDNIELVDDKKNKK 193
Query: 200 YNIA 203
A
Sbjct: 194 KEAA 197
>sp|O42929|DENR_SCHPO Translation machinery-associated protein 22 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=tma22 PE=3 SV=1
Length = 190
Score = 51.2 bits (121), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 38/59 (64%), Gaps = 4/59 (6%)
Query: 143 ASKFFGTRFACGSSVTG----DDEIVIQGDVKDDLFDVIPEKWPEIDEDFIEDLGDLKS 197
A+K +FA G+SVT DEIV+QGD+ D+FD I EK+ E+ ED I+ + D KS
Sbjct: 128 AAKMLANKFATGASVTKTADKKDEIVVQGDLNYDIFDFILEKFKEVPEDNIKIVEDTKS 186
>sp|Q9P3T4|DENR_NEUCR Translation machinery-associated protein 22 OS=Neurospora crassa
(strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257
/ FGSC 987) GN=tma-22 PE=3 SV=1
Length = 187
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 37/55 (67%), Gaps = 4/55 (7%)
Query: 144 SKFFGTRFACGSSVT----GDDEIVIQGDVKDDLFDVIPEKWPEIDEDFIEDLGD 194
+K FG +FA GSSVT G +EIV+QGDV ++ + I EK+ E+ ED IE + D
Sbjct: 124 AKDFGKKFATGSSVTKVPSGGEEIVVQGDVSGEIEEFILEKYKEVPEDNIELVED 178
>sp|Q2H5Z7|DENR_CHAGB Translation machinery-associated protein 22 OS=Chaetomium globosum
(strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 /
NRRL 1970) GN=TMA22 PE=3 SV=1
Length = 188
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 38/58 (65%), Gaps = 4/58 (6%)
Query: 144 SKFFGTRFACGSSVT----GDDEIVIQGDVKDDLFDVIPEKWPEIDEDFIEDLGDLKS 197
+K FG +FA G+SVT G +EIV+QGDV ++ + + EK+ +I ED IE + D K
Sbjct: 126 AKDFGKKFATGASVTKVPSGGEEIVVQGDVSGEIEEFLLEKYKDIPEDNIELVEDKKK 183
>sp|Q2TVZ2|DENR_ASPOR Translation machinery-associated protein 22 OS=Aspergillus oryzae
(strain ATCC 42149 / RIB 40) GN=tma22 PE=3 SV=1
Length = 194
Score = 45.1 bits (105), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 8/56 (14%)
Query: 144 SKFFGTRFACGSSVT----GDDEIVIQGDVKDD----LFDVIPEKWPEIDEDFIED 191
+K G +FA GSSVT G++EI +QGDV DD L +V ++ PE + + IED
Sbjct: 132 AKELGKKFATGSSVTRSAAGNEEITVQGDVSDDVQDWLLEVYGKEIPEANIEIIED 187
>sp|Q6BH22|DENR_DEBHA Translation machinery-associated protein 22 OS=Debaryomyces
hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC
0083 / IGC 2968) GN=TMA22 PE=3 SV=1
Length = 189
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 14/118 (11%)
Query: 91 RGSSVSQDMSVSHLLKNKKLASLMGTTPPSKKTVQKTSYTEAQFPLSS--------DPIV 142
+ +SQ+M + KL + SK T+++ + + +S D
Sbjct: 63 KEQKISQEMEKKQAKEEAKLERELQKKLSSKVTIKRIERNKRKHVISISGLEVFNIDMKK 122
Query: 143 ASKFFGTRFACGSSVTGD----DEIVIQGDVKDDLFDVIPEKWPE--IDEDFIEDLGD 194
+K F ++FA G+SVT + DEI++QGDV D+ D I + E +DE +E + +
Sbjct: 123 LAKTFASKFATGASVTKNAEKKDEIIVQGDVSDEAKDYIEKLLQEKALDEVKVEQIDE 180
>sp|A2QHG9|DENR_ASPNC Translation machinery-associated protein 22 OS=Aspergillus niger
(strain CBS 513.88 / FGSC A1513) GN=tma22 PE=3 SV=1
Length = 197
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 8/62 (12%)
Query: 144 SKFFGTRFACGSSVT----GDDEIVIQGDVKDD----LFDVIPEKWPEIDEDFIEDLGDL 195
+K G +FA GSS+T G +EI +QGDV DD L +V ++ PE + + IED
Sbjct: 132 AKDLGKKFATGSSMTRSAGGTEEITVQGDVSDDVKEWLLEVYGKEIPEANIELIEDKKKK 191
Query: 196 KS 197
K+
Sbjct: 192 KA 193
>sp|P0CR80|DENR_CRYNJ Translation machinery-associated protein 22 OS=Cryptococcus
neoformans var. neoformans serotype D (strain JEC21 /
ATCC MYA-565) GN=TMA22 PE=3 SV=1
Length = 198
Score = 41.6 bits (96), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 31/42 (73%), Gaps = 4/42 (9%)
Query: 143 ASKFFGTRFACGSSVT----GDDEIVIQGDVKDDLFDVIPEK 180
A+K F +FA GSSV+ G++EIVIQGDV D++ ++I ++
Sbjct: 129 AAKQFAGKFATGSSVSKTPQGEEEIVIQGDVGDEIVEMIRQQ 170
>sp|P0CR81|DENR_CRYNB Translation machinery-associated protein 22 OS=Cryptococcus
neoformans var. neoformans serotype D (strain B-3501A)
GN=TMA22 PE=3 SV=1
Length = 198
Score = 41.6 bits (96), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 31/42 (73%), Gaps = 4/42 (9%)
Query: 143 ASKFFGTRFACGSSVT----GDDEIVIQGDVKDDLFDVIPEK 180
A+K F +FA GSSV+ G++EIVIQGDV D++ ++I ++
Sbjct: 129 AAKQFAGKFATGSSVSKTPQGEEEIVIQGDVGDEIVEMIRQQ 170
>sp|A6SIZ0|DENR_BOTFB Translation machinery-associated protein 22 OS=Botryotinia
fuckeliana (strain B05.10) GN=tma22 PE=3 SV=1
Length = 197
Score = 41.6 bits (96), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 29/45 (64%), Gaps = 4/45 (8%)
Query: 144 SKFFGTRFACGSSVT----GDDEIVIQGDVKDDLFDVIPEKWPEI 184
+K FG+RFA GSSVT G EI +QGDV DD+ + + + + I
Sbjct: 133 AKEFGSRFATGSSVTKVASGGQEITVQGDVSDDVREFLIKNYKNI 177
>sp|A1C8E3|DENR_ASPCL Translation machinery-associated protein 22 OS=Aspergillus clavatus
(strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 /
NRRL 1) GN=tma22 PE=3 SV=1
Length = 194
Score = 41.2 bits (95), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 8/56 (14%)
Query: 144 SKFFGTRFACGSSVT----GDDEIVIQGDVKDD----LFDVIPEKWPEIDEDFIED 191
+K G +FA GSSVT G +EI +QGDV +D L +V ++ PE + + +ED
Sbjct: 132 AKELGKKFATGSSVTKSPAGVEEITVQGDVSEDVQEWLLEVYGKELPESNIELVED 187
>sp|Q4WBL6|DENR_ASPFU Translation machinery-associated protein 22 OS=Neosartorya fumigata
(strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=tma22 PE=3 SV=2
Length = 194
Score = 40.4 bits (93), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 36/61 (59%), Gaps = 5/61 (8%)
Query: 144 SKFFGTRFACGSSVT----GDDEIVIQGDVKDDLFDVIPEKW-PEIDEDFIEDLGDLKSP 198
+K G +FA GSSVT G +EI +QGDV +D+ + + E + EI E IE + D K
Sbjct: 132 AKELGKKFATGSSVTKSPAGVEEITVQGDVSEDVKEWLLELYGKEIPESNIELVEDKKKK 191
Query: 199 T 199
T
Sbjct: 192 T 192
>sp|Q6CA08|DENR_YARLI Translation machinery-associated protein 22 OS=Yarrowia lipolytica
(strain CLIB 122 / E 150) GN=TMA22 PE=3 SV=1
Length = 188
Score = 39.7 bits (91), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 4/44 (9%)
Query: 144 SKFFGTRFACGSSVT----GDDEIVIQGDVKDDLFDVIPEKWPE 183
SK F ++FA G+SVT G +EIVIQGDV D + ++I + E
Sbjct: 126 SKTFSSKFATGASVTKTADGKEEIVIQGDVGDGVEELITQMLKE 169
>sp|A1DAY1|DENR_NEOFI Translation machinery-associated protein 22 OS=Neosartorya fischeri
(strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181)
GN=tma22 PE=3 SV=1
Length = 194
Score = 39.7 bits (91), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 8/56 (14%)
Query: 144 SKFFGTRFACGSSVT----GDDEIVIQGDVKDD----LFDVIPEKWPEIDEDFIED 191
+K G +FA GSSVT G +EI +QGDV +D L ++ ++ PE + + +ED
Sbjct: 132 AKELGKKFATGSSVTKSPAGVEEITVQGDVSEDVQEWLLELYGKEIPESNIELVED 187
>sp|Q1E556|DENR_COCIM Translation machinery-associated protein 22 OS=Coccidioides immitis
(strain RS) GN=TMA22 PE=3 SV=1
Length = 200
Score = 38.9 bits (89), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 5/56 (8%)
Query: 144 SKFFGTRFACGSSVT----GDDEIVIQGDVKDDLFDVIPE-KWPEIDEDFIEDLGD 194
+K G +FA GSSVT G +EI +QGDV +D+ + + E E+ ED +E + D
Sbjct: 136 AKELGKKFATGSSVTKNPAGGEEITVQGDVCEDVLEWLVEVHGKEVPEDNLEIVED 191
>sp|Q54WG0|DENR_DICDI Density-regulated protein homolog OS=Dictyostelium discoideum
GN=denr PE=3 SV=1
Length = 224
Score = 37.7 bits (86), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 9/64 (14%)
Query: 143 ASKFFGTRFACGSSVT------GDDEIVIQGDVKDDLFDVIPEKWPEIDED---FIEDLG 193
A+K +F+CG SV ++I IQGD ++L D+I EK+P + F+ED
Sbjct: 160 AAKVMAKKFSCGCSVVKSISNPNSEDIDIQGDFGEELVDLIEEKYPTVPLSEIYFLEDKK 219
Query: 194 DLKS 197
+K+
Sbjct: 220 KVKA 223
>sp|A5E3R9|DENR_LODEL Translation machinery-associated protein 22 OS=Lodderomyces
elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 /
NBRC 1676 / NRRL YB-4239) GN=TMA22 PE=3 SV=1
Length = 196
Score = 37.4 bits (85), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 4/43 (9%)
Query: 139 DPIVASKFFGTRFACGSSVTGD----DEIVIQGDVKDDLFDVI 177
+P +K F ++FA G+SV + DE+V+QGDV D+ + I
Sbjct: 136 EPKKLAKTFASKFATGASVVKNAEKLDEVVVQGDVSDEAKEYI 178
>sp|A5DGV3|DENR_PICGU Translation machinery-associated protein 22 OS=Meyerozyma
guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 /
JCM 1539 / NBRC 10279 / NRRL Y-324) GN=TMA22 PE=3 SV=1
Length = 201
Score = 37.0 bits (84), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 24/33 (72%), Gaps = 4/33 (12%)
Query: 144 SKFFGTRFACGSSVTGD----DEIVIQGDVKDD 172
SK F ++FA G+SVT + DEI++QGDV D+
Sbjct: 124 SKTFASKFATGASVTKNAEKKDEIIVQGDVSDE 156
>sp|Q9HPB7|RL32_HALSA 50S ribosomal protein L32e OS=Halobacterium salinarum (strain ATCC
700922 / JCM 11081 / NRC-1) GN=rpl32e PE=1 SV=3
Length = 239
Score = 37.0 bits (84), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 36/86 (41%), Gaps = 4/86 (4%)
Query: 155 SSVTGDDEIVIQGDVKDDL-FDVIPEKWPEIDED---FIEDLGDLKSPTYNIAYYVLPTH 210
V GDDE DV+ +L + EK P++ ED ++ + +P +N Y
Sbjct: 76 EEVGGDDEADTDADVETELRARGLTEKTPDLSEDEQRLLQKRRSVNTPQFNRQDYHKKKR 135
Query: 211 IIISWVQPNGTLLLTMRSCFTHGFIV 236
SW +P GTL R G V
Sbjct: 136 TPTSWRRPKGTLSKQRRGIKGKGDTV 161
>sp|A3LSY0|DENR_PICST Translation machinery-associated protein 22 OS=Scheffersomyces
stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 /
NRRL Y-11545) GN=TMA22 PE=3 SV=1
Length = 195
Score = 35.4 bits (80), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 46/102 (45%), Gaps = 12/102 (11%)
Query: 89 VLRGSSVSQDMSVSHLLKNKKLASLMGTTPPSKKTVQKTSYTEAQFPLSS--------DP 140
+ R +SQ+++ L + K + SK +++ + +S D
Sbjct: 61 IERQEKISQELAKKQLKEEAKQERELQKKLASKVLIKRIERNRRKHIISISGLEVFNIDM 120
Query: 141 IVASKFFGTRFACGSSVTG----DDEIVIQGDVKDDLFDVIP 178
+K F ++FA G+SVT +EI++QGDV D+ + I
Sbjct: 121 KKLAKTFASKFATGASVTKTADKKEEILVQGDVSDEAKEYIE 162
>sp|P47089|DENR_YEAST Translation machinery-associated protein 22 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=TMA22 PE=1
SV=1
Length = 198
Score = 33.9 bits (76), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%), Gaps = 4/34 (11%)
Query: 144 SKFFGTRFACGSSVTGD----DEIVIQGDVKDDL 173
+K F +RFA G SV+ + +E+VIQGDV D++
Sbjct: 129 AKTFASRFATGCSVSKNAEKKEEVVIQGDVMDEV 162
>sp|A6ZPY2|DENR_YEAS7 Translation machinery-associated protein 22 OS=Saccharomyces
cerevisiae (strain YJM789) GN=TMA22 PE=3 SV=1
Length = 198
Score = 33.9 bits (76), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%), Gaps = 4/34 (11%)
Query: 144 SKFFGTRFACGSSVTGD----DEIVIQGDVKDDL 173
+K F +RFA G SV+ + +E+VIQGDV D++
Sbjct: 129 AKTFASRFATGCSVSKNAEKKEEVVIQGDVMDEV 162
>sp|Q2FTC8|SUI1_METHJ Protein translation factor SUI1 homolog OS=Methanospirillum
hungatei (strain JF-1 / DSM 864) GN=Mhun_2911 PE=3 SV=1
Length = 101
Score = 33.5 bits (75), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 125 QKTSYTEAQFPLSSDPIVASKFFGTRFACGSSVTGDDEIVIQGDVKDDLFDVIPEKWPEI 184
++ + E P D SKF ++ ACG +V G + I +QG+ +D + D++ K +
Sbjct: 39 KEVTVIEGLDPTDIDLEDLSKFMKSKLACGGTVKG-NSIELQGNHRDRVIDLLATKGYTV 97
Query: 185 D 185
D
Sbjct: 98 D 98
>sp|P40921|EF1G_SCHPO Elongation factor 1-gamma OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=tef3 PE=1 SV=1
Length = 409
Score = 32.7 bits (73), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 92 GSSVSQDMSVSHLLKN-KKLASLMGTTPPSK-KTVQKTSYTEAQFPLSSDPIVASKFFGT 149
G +S+ ++++ L + K +L GTT K K +Q S+T ++ P + PI+A + FG
Sbjct: 60 GFPLSETLAIAFYLASLNKTRALNGTTAEEKAKVLQYCSFTNSELPGAFRPIIAPRVFGA 119
Query: 150 RFACGSSVTGDDEIVI 165
+ ++ + I +
Sbjct: 120 PYDEQAAKEAETAIAL 135
>sp|O26664|Y564_METTH Uncharacterized protein MTH_564 OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=MTH_564 PE=4 SV=1
Length = 246
Score = 32.3 bits (72), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 148 GTRFACGSSVTGDDEIVIQGDVKDDLFDVIPEKWPEIDEDFIEDLGDLK 196
G A +++TGDD +VI V+DD+ + + EI D E LGDL+
Sbjct: 39 GAESAALTNITGDD-VVISAFVEDDMLETVNRAIVEILRDSSESLGDLE 86
>sp|Q8L612|MACP1_ARATH MACPF domain-containing protein At1g14780 OS=Arabidopsis thaliana
GN=At1g14780 PE=2 SV=1
Length = 627
Score = 32.0 bits (71), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 47/111 (42%), Gaps = 5/111 (4%)
Query: 68 DFFDRSSHGGCAKPVGDFREIV--LRGSSVSQDMSVSHLLKNKKLASLMGTTPPSKKTVQ 125
++F++ S P G+F GS + +V L + + +L + ++
Sbjct: 91 EYFNQRSSVTGKIPSGNFNATFGFQSGSWATDAANVKSLGLDASVVTLFNLHIHNPNRLR 150
Query: 126 KTSYTEAQFPLSSDPIVASKF---FGTRFACGSSVTGDDEIVIQGDVKDDL 173
T P S DP + ++F +GT G SV G D +V++ D DL
Sbjct: 151 LTDRVRNAVPSSWDPQLLARFIERYGTHVITGVSVGGQDVVVVRQDKSSDL 201
>sp|P40645|SOX6_MOUSE Transcription factor SOX-6 OS=Mus musculus GN=Sox6 PE=1 SV=2
Length = 827
Score = 31.6 bits (70), Expect = 5.7, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 5/66 (7%)
Query: 111 ASLMGTTPPSKKTVQKTSYTEAQFPLSSDPIVAS----KFFGTRFACGSSVTGDDEIVIQ 166
A M TT PS + S T A P S P++ S K G A + G+DE+
Sbjct: 745 AITMATTTPSPQMTSDCSSTSAS-PEPSLPVIQSTYGMKMDGASLAGNDMINGEDEMEAY 803
Query: 167 GDVKDD 172
D +DD
Sbjct: 804 DDYEDD 809
>sp|Q9ZUV9|CHX7_ARATH Cation/H(+) antiporter 7 OS=Arabidopsis thaliana GN=CHX7 PE=2 SV=2
Length = 801
Score = 31.6 bits (70), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 42/97 (43%), Gaps = 11/97 (11%)
Query: 44 ALSYLNPYVIHRFLCESDVWPIRPDFFDRSSHGGCAKPVGDFREIVLRGSSVSQDMSVSH 103
A+ LN V+ R C ++ R ++ HG C K IV+ G + ++ ++
Sbjct: 617 AMQNLNHKVLKRASCSVGIFVYRKPLWESQMHGSCYKVCA----IVVGGKDDKEALAFTN 672
Query: 104 LLKNKKLASL-------MGTTPPSKKTVQKTSYTEAQ 133
++ K S+ TT S+ +VQK Y + +
Sbjct: 673 RMRRNKQTSVTILHLIPQLTTEESEDSVQKLDYDDIK 709
>sp|O94281|CSK2C_SCHPO Probable casein kinase II subunit beta-2 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPBC2G5.02c PE=3 SV=1
Length = 254
Score = 31.6 bits (70), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 39/91 (42%), Gaps = 6/91 (6%)
Query: 179 EKWPEIDEDFIEDLGDLKSPTYNIAYYVLPTHIIISWVQPNGTLLLTMRSCFTHGFIVLG 238
E + E+ EDFIEDL +L + +Y +I+ P+ M T I+ G
Sbjct: 52 EYFVEVKEDFIEDLFNLTGLNLAVPFYNEALDLILDRTAPDTLENFDMDVIETSAQILYG 111
Query: 239 ITEYIVPKYLFTLFFYHQL---FDCSVLLCC 266
+ I +Y+ T HQ+ + + CC
Sbjct: 112 L---IHQRYIITRTGLHQMAEKYSMGIFGCC 139
>sp|Q59020|Y1625_METJA Uncharacterized protein MJ1625 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ1625 PE=4 SV=1
Length = 671
Score = 31.2 bits (69), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 37/81 (45%), Gaps = 7/81 (8%)
Query: 141 IVASKFFGTRFACGSSVTGDDEIVIQGDVKDDLFDVIPEKWPEIDEDFIEDLGDLK---S 197
++A K T T D+IV D++ F VI + E+DE+ +E++ S
Sbjct: 488 VIAGKDAITNEIIIKKYTDKDDIVFHADIQGAPFTVIKTQGKEVDEETLEEVAKFSVSHS 547
Query: 198 PTYNIAYYVLPTHIIISWVQP 218
+ + Y + T+ WV+P
Sbjct: 548 RAWKLGYGAIDTY----WVKP 564
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.139 0.435
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,543,283
Number of Sequences: 539616
Number of extensions: 4329561
Number of successful extensions: 9012
Number of sequences better than 100.0: 40
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 8976
Number of HSP's gapped (non-prelim): 42
length of query: 266
length of database: 191,569,459
effective HSP length: 115
effective length of query: 151
effective length of database: 129,513,619
effective search space: 19556556469
effective search space used: 19556556469
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 60 (27.7 bits)