Query psy14668
Match_columns 266
No_of_seqs 131 out of 361
Neff 2.7
Searched_HMMs 29240
Date Fri Aug 16 17:33:48 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14668.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14668hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1d1r_A Hypothetical 11.4 KD pr 99.9 6.4E-23 2.2E-27 166.0 4.4 87 101-193 23-110 (116)
2 2xzm_F EIF1; ribosome, transla 99.8 1.5E-21 5.1E-26 154.1 6.7 82 106-193 14-100 (101)
3 2ogh_A Eukaryotic translation 99.8 2.7E-20 9.1E-25 147.9 8.7 84 105-193 20-107 (108)
4 2if1_A EIF1, SUI1; translation 99.8 6.2E-20 2.1E-24 150.2 8.0 81 106-192 39-124 (126)
5 1gxu_A Hydrogenase maturation 82.5 3.5 0.00012 31.0 6.3 49 130-180 13-64 (91)
6 2lxf_A Uncharacterized protein 72.6 4.6 0.00016 32.5 4.6 62 129-192 39-104 (121)
7 2fhm_A Probable acylphosphatas 71.0 10 0.00034 28.2 5.9 63 129-193 7-73 (91)
8 1urr_A CG18505 protein; acylph 70.3 9.9 0.00034 28.9 5.9 61 129-192 16-82 (102)
9 2vh7_A Acylphosphatase-1; hydr 69.5 9.7 0.00033 28.8 5.6 51 129-180 13-69 (99)
10 2d74_B Translation initiation 69.5 3.5 0.00012 34.4 3.4 53 128-181 44-100 (148)
11 2e9h_A EIF-5, eukaryotic trans 69.2 3.6 0.00012 34.7 3.5 53 129-181 42-99 (157)
12 1nee_A EIF-2-beta, probable tr 61.5 3.5 0.00012 33.9 1.9 53 128-181 42-98 (138)
13 3trg_A Acylphosphatase; fatty 59.1 21 0.00072 27.1 5.8 49 129-179 17-69 (98)
14 1aps_A Acylphosphatase; hydrol 54.5 10 0.00035 28.6 3.3 47 129-177 12-62 (98)
15 2g2k_A EIF-5, eukaryotic trans 54.1 4.9 0.00017 34.3 1.6 43 139-181 49-92 (170)
16 3cw2_K Translation initiation 53.5 1.1 3.6E-05 37.1 -2.5 54 128-181 42-99 (139)
17 1k8b_A EIF-2-beta, probable tr 49.1 15 0.00051 25.7 3.2 40 128-168 9-52 (52)
18 2gv1_A Probable acylphosphatas 48.4 22 0.00076 26.4 4.3 47 130-177 10-62 (92)
19 1ulr_A Putative acylphosphatas 48.2 53 0.0018 24.1 6.3 49 129-178 7-61 (88)
20 2bjd_A Acylphosphatase; hypert 40.9 55 0.0019 24.9 5.5 49 129-179 19-71 (101)
21 1w2i_A Acylphosphatase; hydrol 40.5 56 0.0019 24.2 5.4 49 129-178 9-63 (91)
22 3vth_A Hydrogenase maturation 27.9 1.1E+02 0.0038 31.0 6.8 51 129-180 15-70 (761)
23 3mf7_A CIS-3-chloroacrylic aci 25.4 40 0.0014 27.2 2.6 57 152-209 52-121 (149)
24 1in0_A YAJQ protein, HI1034; a 22.8 1.1E+02 0.0038 26.1 4.9 53 141-193 20-83 (163)
No 1
>1d1r_A Hypothetical 11.4 KD protein YCIH in PYRF-OSMB intergenic region; alpha-beta plait, open-faced beta sandwich, ferredoxin-like fold; NMR {Escherichia coli} SCOP: d.64.1.1
Probab=99.86 E-value=6.4e-23 Score=166.05 Aligned_cols=87 Identities=18% Similarity=0.187 Sum_probs=76.3
Q ss_pred ccccccccceeeeccccCCCc-eeEeEeeeEeccCCCCCCHHHHHHHHhccccceeeecCCcEEEEcCCchhHHHHhhhh
Q psy14668 101 VSHLLKNKKLASLMGTTPPSK-KTVQKTSYTEAQFPLSSDPIVASKFFGTRFACGSSVTGDDEIVIQGDVKDDLFDVIPE 179 (266)
Q Consensus 101 ~etL~knKQ~LKv~l~kknRk-KtI~kVT~IsGLE~FgIDLKeLAK~LKKKFACGgSVkg~~EI~IQGD~rdkV~elL~e 179 (266)
.+++|+++|.++|..++++|+ |+ ||+|+||+.|++|+++|||.||++|||||||++ ++|+||||++++|.++|.+
T Consensus 23 ~~~~p~~~~~V~I~~er~gR~GK~---VT~V~Gl~~~~~dlk~laK~LKkk~acgGtVk~-~~IeiQGD~r~~i~~~L~~ 98 (116)
T 1d1r_A 23 APVRPKGDGVVRIQRQTSGRKGKG---VCLITGVDLDDAELTKLAAELKKKCGCGGAVKD-GVIEIQGDKRDLLKSLLEA 98 (116)
T ss_dssp -----CCCCEEEEEECCCSSSSCC---CEEEECCCSCHHHHHHHHHHHTTSSSSCCBCCS-SCEEECSCCHHHHHHHHHH
T ss_pred ccCCCCCCCeEEEEEEeCCCCCCe---EEEEeCCcCchhhHHHHHHHHHHHhcCCcEEcC-CEEEEeCcHHHHHHHHHHH
Confidence 478899999999999977776 99 999999999999999999999999999999974 8999999999999999999
Q ss_pred hCCCCCcCceEEcC
Q psy14668 180 KWPEIDEDFIEDLG 193 (266)
Q Consensus 180 KypGIpek~Ievld 193 (266)
+ |++.++|+.++
T Consensus 99 ~--G~~vk~i~~~~ 110 (116)
T 1d1r_A 99 K--GMKVKLAGGLE 110 (116)
T ss_dssp H--TCEECCCCCCC
T ss_pred c--CCCcceecccc
Confidence 8 89888887665
No 2
>2xzm_F EIF1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_F
Probab=99.84 E-value=1.5e-21 Score=154.10 Aligned_cols=82 Identities=16% Similarity=0.212 Sum_probs=74.1
Q ss_pred cccceeeeccccCCCceeEeEeeeEeccCCCCCCHHHHHHHHhccccceeeecCC----cEEEEcCCchhHHHHhhhhhC
Q psy14668 106 KNKKLASLMGTTPPSKKTVQKTSYTEAQFPLSSDPIVASKFFGTRFACGSSVTGD----DEIVIQGDVKDDLFDVIPEKW 181 (266)
Q Consensus 106 knKQ~LKv~l~kknRkKtI~kVT~IsGLE~FgIDLKeLAK~LKKKFACGgSVkg~----~EI~IQGD~rdkV~elL~eKy 181 (266)
+.++.++|..++|+.+|+ ||+|+||+ +++|+++|||.||++|||||||+++ ++|+||||++++|.++|.++
T Consensus 14 ~~~~~v~I~~~~R~g~K~---VT~V~Gl~-~~~dlk~laK~lKkk~acggsV~~~~~~g~~I~iQGD~r~~v~~~L~~~- 88 (101)
T 2xzm_F 14 DFQTHIHIRVEQRRGRKC---FTTVEGIP-PEFDYEKIMKYWKKWLSCNATIVEEDEGKKVIKLNGDHRNQIQQFLSEE- 88 (101)
T ss_dssp CCSCCEEEEEEEEETTEE---EEEEECCC-TTSCTHHHHHHHHHHHTSCCCEEECSTTCEEEEEESCCHHHHHHHHHHH-
T ss_pred CCCCeEEEEEEeccCCcc---EEEEecCC-CchhHHHHHHHHHHHhcCCeEEecCCCCceEEEEeCcHHHHHHHHHHHc-
Confidence 368889999999866799 99999999 9999999999999999999999842 39999999999999999998
Q ss_pred CCC-CcCceEEcC
Q psy14668 182 PEI-DEDFIEDLG 193 (266)
Q Consensus 182 pGI-pek~Ievld 193 (266)
|+ |+++|++..
T Consensus 89 -G~~~~~~I~vhg 100 (101)
T 2xzm_F 89 -GIAAVDNITIHG 100 (101)
T ss_dssp -SSSCTTTEEECC
T ss_pred -CCCCHHHEEEcC
Confidence 77 999999853
No 3
>2ogh_A Eukaryotic translation initiation factor EIF-1; alpha-beta protein; NMR {Saccharomyces cerevisiae}
Probab=99.82 E-value=2.7e-20 Score=147.90 Aligned_cols=84 Identities=17% Similarity=0.228 Sum_probs=74.5
Q ss_pred ccccceeeeccccCCCceeEeEeeeEeccCCCCCCHHHHHHHHhccccceeeecCC----cEEEEcCCchhHHHHhhhhh
Q psy14668 105 LKNKKLASLMGTTPPSKKTVQKTSYTEAQFPLSSDPIVASKFFGTRFACGSSVTGD----DEIVIQGDVKDDLFDVIPEK 180 (266)
Q Consensus 105 ~knKQ~LKv~l~kknRkKtI~kVT~IsGLE~FgIDLKeLAK~LKKKFACGgSVkg~----~EI~IQGD~rdkV~elL~eK 180 (266)
...++.+++..++|+.+|+ ||+|+||+. ++|+++|||.||++|||||||+++ ++|+||||++++|.++|.++
T Consensus 20 ~~~~~~V~Ir~~~R~g~K~---VT~V~Gl~~-~~dlk~lak~lKkk~acggsV~~~~~~g~~I~iQGD~r~~v~~~L~~~ 95 (108)
T 2ogh_A 20 TATSNYIHIRIQQRNGRKT---LTTVQGVPE-EYDLKRILKVLKKDFACNGNIVKDPEMGEIIQLQGDQRAKVCEFMISQ 95 (108)
T ss_dssp CCCSCSEEEEEECCSSSCC---EEEEECCCT-TSCHHHHHHHHHHHHCCCEEEECCTTSSCEEEEESSCHHHHHHHHHHH
T ss_pred cCCCCeEEEEEEEccCCce---EEEEeCCCc-chhHHHHHHHHHHHhcCceEEecCCCCceEEEEcCCHHHHHHHHHHHc
Confidence 3577889999988877799 999999996 999999999999999999999842 39999999999999999999
Q ss_pred CCCCCcCceEEcC
Q psy14668 181 WPEIDEDFIEDLG 193 (266)
Q Consensus 181 ypGIpek~Ievld 193 (266)
. .+|+++|++.+
T Consensus 96 g-~~~~~~I~vhg 107 (108)
T 2ogh_A 96 L-GLQKKNIKIHG 107 (108)
T ss_dssp H-TSCCSCEEECC
T ss_pred C-CCCHHHEEEcC
Confidence 4 56999999864
No 4
>2if1_A EIF1, SUI1; translation initiation factor; NMR {Homo sapiens} SCOP: d.64.1.1
Probab=99.80 E-value=6.2e-20 Score=150.23 Aligned_cols=81 Identities=19% Similarity=0.278 Sum_probs=73.0
Q ss_pred cccceeeeccccCCCceeEeEeeeEeccCCCCCCHHHHHHHHhccccceeeecCC----cEEEEcCCchhHHHHhhhhhC
Q psy14668 106 KNKKLASLMGTTPPSKKTVQKTSYTEAQFPLSSDPIVASKFFGTRFACGSSVTGD----DEIVIQGDVKDDLFDVIPEKW 181 (266)
Q Consensus 106 knKQ~LKv~l~kknRkKtI~kVT~IsGLE~FgIDLKeLAK~LKKKFACGgSVkg~----~EI~IQGD~rdkV~elL~eKy 181 (266)
++++.++|..++|+.+|+ ||+|+||+. ++|+++|||+||++|||||||+++ ++|+||||++++|.++|.++
T Consensus 39 g~~~~V~Ir~~~R~grK~---VT~V~GL~~-~~dlk~laK~LKkk~acgGtVk~~~e~g~~I~IQGD~r~~I~~~L~~~- 113 (126)
T 2if1_A 39 GTEDYIHIRIQQRNGRKT---LTTVQGIAD-DYDKKKLVKAFKKKFACNGTVIEHPEYGEVIQLQGDQRKNICQFLVEI- 113 (126)
T ss_dssp SCTTCEECCCCCSSSSCC---BCEEBSCCT-TSCHHHHHTTHHHHTCCCEEEECCTTTSSEEEESBCCHHHHHHHHHHH-
T ss_pred CCCCeEEEEEEeecCCcc---EEEEeCCCC-chhHHHHHHHHHHHhcCCeEEecCCCCccEEEEcCCHHHHHHHHHHHc-
Confidence 567888899988877799 999999998 999999999999999999999852 59999999999999999998
Q ss_pred CCC-CcCceEEc
Q psy14668 182 PEI-DEDFIEDL 192 (266)
Q Consensus 182 pGI-pek~Ievl 192 (266)
|+ ++++|++.
T Consensus 114 -G~~~~~~I~vh 124 (126)
T 2if1_A 114 -GLAKDDQLKVH 124 (126)
T ss_dssp -TSSCTTTEECC
T ss_pred -CCCChhhEEee
Confidence 87 68899874
No 5
>1gxu_A Hydrogenase maturation protein HYPF; phosphatase, acylphosphatases, hydrogenase maturations, fibril formation, zinc-finger, complete proteome; 1.27A {Escherichia coli} SCOP: d.58.10.1 PDB: 1gxt_A
Probab=82.52 E-value=3.5 Score=30.98 Aligned_cols=49 Identities=10% Similarity=0.100 Sum_probs=41.9
Q ss_pred EeccCCCCCCHHHHHHHHhccccceeeec--CCc-EEEEcCCchhHHHHhhhhh
Q psy14668 130 TEAQFPLSSDPIVASKFFGTRFACGSSVT--GDD-EIVIQGDVKDDLFDVIPEK 180 (266)
Q Consensus 130 IsGLE~FgIDLKeLAK~LKKKFACGgSVk--g~~-EI~IQGD~rdkV~elL~eK 180 (266)
|+|..+ |+=.-.....++++++-.|.|. .++ ||++||+- ++.++.|.+.
T Consensus 13 V~G~VQ-GVGFR~~v~~~A~~lgL~G~VrN~~dGVei~~eG~~-~~f~~~l~~~ 64 (91)
T 1gxu_A 13 IRGKVQ-GVGFRPFVWQLAQQLNLHGDVCNDGDGVEVRLREDP-EVFLVQLYQH 64 (91)
T ss_dssp EEEECS-SSSHHHHHHHHHHHHTCCEEEEECSSSEEEEESSCC-HHHHHHHHHT
T ss_pred EEEeeC-CcCHHHHHHHHHHHcCCeEEEEECCCcEEEEEEECH-HHHHHHHhhC
Confidence 788766 8889999999999999999997 234 99999999 8888888765
No 6
>2lxf_A Uncharacterized protein; beaver fever, giardiasis, seattle structural genomics center infectious disease, ssgcid, structural genomics; NMR {Giardia lamblia}
Probab=72.56 E-value=4.6 Score=32.46 Aligned_cols=62 Identities=11% Similarity=0.003 Sum_probs=42.2
Q ss_pred eEeccCCCCCCHHHHHHHHhccccceeeec--CCc--EEEEcCCchhHHHHhhhhhCCCCCcCceEEc
Q psy14668 129 YTEAQFPLSSDPIVASKFFGTRFACGSSVT--GDD--EIVIQGDVKDDLFDVIPEKWPEIDEDFIEDL 192 (266)
Q Consensus 129 ~IsGLE~FgIDLKeLAK~LKKKFACGgSVk--g~~--EI~IQGD~rdkV~elL~eKypGIpek~Ievl 192 (266)
+|+|..+ |+=.......++++++..|.|. .++ ||++||+- +.|.+||..-..|=|...|+-+
T Consensus 39 rV~G~VQ-GVGFR~~v~~~A~~lgL~G~VrN~~dG~Vei~~eG~~-~~v~~f~~~l~~gPp~A~V~~v 104 (121)
T 2lxf_A 39 RVTGKVQ-GVFFRKYTKKEADALSLVGYVTNNEDGSVSGVVQGPK-EQVDAFVKYLHKGSPKSVVKKV 104 (121)
T ss_dssp EEEECTT-CCCCHHHHHHHHHHHTCEEEEEECTTSCEEEEEEEEH-HHHHHHHHHHHHCCTTCCEEEE
T ss_pred EEEEeeC-CcCchHHHHHHHHHcCCEEEEEECCCCCEEEEEEECH-HHHHHHHHHHHhCCCCCEEEEE
Confidence 4888876 7888999999999999999998 234 99999973 4444444332214333444443
No 7
>2fhm_A Probable acylphosphatase; hydrolase; NMR {Bacillus subtilis} PDB: 2hlt_A 2hlu_A 3br8_A
Probab=71.00 E-value=10 Score=28.20 Aligned_cols=63 Identities=10% Similarity=0.017 Sum_probs=43.1
Q ss_pred eEeccCCCCCCHHHHHHHHhccccceeeec---CC-cEEEEcCCchhHHHHhhhhhCCCCCcCceEEcC
Q psy14668 129 YTEAQFPLSSDPIVASKFFGTRFACGSSVT---GD-DEIVIQGDVKDDLFDVIPEKWPEIDEDFIEDLG 193 (266)
Q Consensus 129 ~IsGLE~FgIDLKeLAK~LKKKFACGgSVk---g~-~EI~IQGD~rdkV~elL~eKypGIpek~Ievld 193 (266)
+|+|... |+-.-.....++++++-.|.|. ++ =||++||+-. .|.+++..-..|-|+..|+-++
T Consensus 7 ~v~G~VQ-GVGFR~~v~~~A~~lgl~G~V~N~~dG~Vei~~eG~~~-~i~~f~~~l~~~~p~a~V~~v~ 73 (91)
T 2fhm_A 7 IVDGRVQ-GVGFRYFVQMEADKRKLAGWVKNRDDGRVEILAEGPEN-ALQSFVEAVKNGSPFSKVTDIS 73 (91)
T ss_dssp EEEEECC-SSCHHHHHHHHHHHTTCEEEEEECTTSCEEEEEEECHH-HHHHHHHHHHTTCSSSEEEEEE
T ss_pred EEEEeEC-CcCHHHHHHHHHHHcCCeEEEEECCCCcEEEEEEeCHH-HHHHHHHHHHhCCCccEEEEEE
Confidence 3778766 7889999999999999999997 22 5999999863 3444443322243445555443
No 8
>1urr_A CG18505 protein; acylphosphatase, enzyme; 1.5A {Drosophila melanogaster} SCOP: d.58.10.1
Probab=70.29 E-value=9.9 Score=28.93 Aligned_cols=61 Identities=5% Similarity=-0.052 Sum_probs=43.2
Q ss_pred eEeccCCCCCCHHHHHHHHhccccceeeec--CCc--EEEEcCCch--hHHHHhhhhhCCCCCcCceEEc
Q psy14668 129 YTEAQFPLSSDPIVASKFFGTRFACGSSVT--GDD--EIVIQGDVK--DDLFDVIPEKWPEIDEDFIEDL 192 (266)
Q Consensus 129 ~IsGLE~FgIDLKeLAK~LKKKFACGgSVk--g~~--EI~IQGD~r--dkV~elL~eKypGIpek~Ievl 192 (266)
+|+|... |+-.-.....++++++-.|.|. .++ ||++||+-. ++..+.|.++ +=|...|+-+
T Consensus 16 ~V~G~VQ-GVGFR~~v~~~A~~lgL~G~V~N~~dG~Vei~~eG~~~~l~~f~~~l~~~--gP~~a~V~~v 82 (102)
T 1urr_A 16 EIFGRVQ-GVFFRKHTSHEAKRLGVRGWCMNTRDGTVKGQLEAPMMNLMEMKHWLENN--RIPNAKVSKA 82 (102)
T ss_dssp EEEEECS-SSSHHHHHHHHHHHHTCEEEEEECTTSCEEEEEEECHHHHHHHHHHHHHC--CSTTCEEEEE
T ss_pred EEEEeEC-CcChhHHHHHHHHHhCCcEEEEECCCCCEEEEEEcCHHHHHHHHHHHHhc--CCCccEEEEE
Confidence 3788766 8899999999999999999997 234 999999863 4455555533 3233444443
No 9
>2vh7_A Acylphosphatase-1; hydrolase, acetylation; 1.45A {Homo sapiens} PDB: 2w4c_A 2w4p_A 2k7k_A 2k7j_A 2acy_A
Probab=69.50 E-value=9.7 Score=28.76 Aligned_cols=51 Identities=8% Similarity=0.008 Sum_probs=39.2
Q ss_pred eEeccCCCCCCHHHHHHHHhccccceeeec--CCc--EEEEcCCch--hHHHHhhhhh
Q psy14668 129 YTEAQFPLSSDPIVASKFFGTRFACGSSVT--GDD--EIVIQGDVK--DDLFDVIPEK 180 (266)
Q Consensus 129 ~IsGLE~FgIDLKeLAK~LKKKFACGgSVk--g~~--EI~IQGD~r--dkV~elL~eK 180 (266)
+|+|... |+=.-.....++++++-.|.|. .++ ||++||+-. ++..+.|.++
T Consensus 13 ~V~G~VQ-GVGFR~~v~~~A~~lgL~G~V~N~~dG~Vei~~eG~~~~v~~f~~~l~~~ 69 (99)
T 2vh7_A 13 EIFGKVQ-GVFFRKHTQAEGKKLGLVGWVQNTDRGTVQGQLQGPISKVRHMQEWLETR 69 (99)
T ss_dssp EEEEECS-SSCHHHHHHHHHHHTTCEEEEEECTTSCEEEEEEEEHHHHHHHHHHHHHT
T ss_pred EEEEeeC-CcChHHHHHHHHHHcCCcEEEEECCCCCEEEEEEcCHHHHHHHHHHHHhc
Confidence 3788766 8999999999999999999997 234 999999853 4455555443
No 10
>2d74_B Translation initiation factor 2 beta subunit; protein complex; 2.80A {Pyrococcus furiosus} PDB: 2dcu_B*
Probab=69.49 E-value=3.5 Score=34.36 Aligned_cols=53 Identities=21% Similarity=0.268 Sum_probs=39.5
Q ss_pred eeEeccCCC----CCCHHHHHHHHhccccceeeecCCcEEEEcCCchhHHHHhhhhhC
Q psy14668 128 SYTEAQFPL----SSDPIVASKFFGTRFACGSSVTGDDEIVIQGDVKDDLFDVIPEKW 181 (266)
Q Consensus 128 T~IsGLE~F----gIDLKeLAK~LKKKFACGgSVkg~~EI~IQGD~rdkV~elL~eKy 181 (266)
|+|.+|... .=+++-+.|.|...+|+.|++. ++..+|||.+..+-++-+.++|
T Consensus 44 Tvi~Nf~dIa~~L~R~p~hv~ky~~~ELGt~g~id-~~rlii~G~~~~~~i~~~L~~y 100 (148)
T 2d74_B 44 TIIENFKDIADALNRDPQHLLKFLLREIATAGTLE-GRRVVLQGRFTPYLIANKLKKY 100 (148)
T ss_dssp EEESCHHHHHHHHTCCSHHHHHHHHHHSCCCEEEE-TTEEEESSCCCHHHHHHHHHHH
T ss_pred EEEEcHHHHHHHHCCCHHHHHHHHHHHhCCceeec-CCEEEEEeeeCHHHHHHHHHHH
Confidence 345555432 3466777788888999999997 7999999999888777665544
No 11
>2e9h_A EIF-5, eukaryotic translation initiation factor 5; zinc binding, C4 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=69.21 E-value=3.6 Score=34.70 Aligned_cols=53 Identities=11% Similarity=0.338 Sum_probs=40.4
Q ss_pred eEeccCCC----CCCHHHHHHHHhccccceeeec-CCcEEEEcCCchhHHHHhhhhhC
Q psy14668 129 YTEAQFPL----SSDPIVASKFFGTRFACGSSVT-GDDEIVIQGDVKDDLFDVIPEKW 181 (266)
Q Consensus 129 ~IsGLE~F----gIDLKeLAK~LKKKFACGgSVk-g~~EI~IQGD~rdkV~elL~eKy 181 (266)
+|.+|... .=+++-+.|.|...+|+.|++. +++..+|||.|..+.++-+.+.|
T Consensus 42 vi~Nf~dIak~L~R~p~hv~ky~~~ELGt~g~id~~~~rlii~G~~~~~~i~~~L~~y 99 (157)
T 2e9h_A 42 VIVNMVDVAKALNRPPTYPTKYFGCELGAQTQFDVKNDRYIVNGSHEANKLQDMLDGF 99 (157)
T ss_dssp EETTHHHHHHHTTSCTHHHHHHHHHHHTCCEEEETTTTEEEEEBCCCHHHHHHHHHHH
T ss_pred EEEcHHHHHHHHCCCHHHHHHHHHHHhCCceeecCCCCEEEEEeeeCHHHHHHHHHHH
Confidence 45555432 3467777888899999999997 57999999999988777666654
No 12
>1nee_A EIF-2-beta, probable translation initiation factor 2 beta subunit; two domain protein, mixed alpha-beta structure; NMR {Methanothermobacterthermautotrophicus} SCOP: d.241.1.1 g.59.1.1
Probab=61.49 E-value=3.5 Score=33.90 Aligned_cols=53 Identities=15% Similarity=0.268 Sum_probs=40.8
Q ss_pred eeEeccCCC----CCCHHHHHHHHhccccceeeecCCcEEEEcCCchhHHHHhhhhhC
Q psy14668 128 SYTEAQFPL----SSDPIVASKFFGTRFACGSSVTGDDEIVIQGDVKDDLFDVIPEKW 181 (266)
Q Consensus 128 T~IsGLE~F----gIDLKeLAK~LKKKFACGgSVkg~~EI~IQGD~rdkV~elL~eKy 181 (266)
|+|.+|... .=+++-+.|.|...+|+.|++. ++..+|||.|..+-++-+.++|
T Consensus 42 Tvi~Nf~dIa~~L~R~p~hv~ky~~~ELGt~g~id-~~rlii~G~~~~~~i~~~L~~y 98 (138)
T 1nee_A 42 TFIQNFREVADALNRDPQHLLKFLLRELGTAGNLE-GGRAILQGKFTHFLINERIEDY 98 (138)
T ss_dssp EEESCHHHHHHHHCSSHHHHHHHHHHHCCSCCCCB-TTTEEEESSCSSSHHHHHHHHH
T ss_pred EEEEcHHHHHHHHCCCHHHHHHHHHHHhCCceeec-CCEEEEEeeeCHHHHHHHHHHH
Confidence 456666543 3467788888899999999997 7999999999887776665554
No 13
>3trg_A Acylphosphatase; fatty acid and phospholipid metabolism, hydrolase; 1.60A {Coxiella burnetii}
Probab=59.10 E-value=21 Score=27.09 Aligned_cols=49 Identities=10% Similarity=0.020 Sum_probs=37.9
Q ss_pred eEeccCCCCCCHHHHHHHHhccccceeeec--CC--cEEEEcCCchhHHHHhhhh
Q psy14668 129 YTEAQFPLSSDPIVASKFFGTRFACGSSVT--GD--DEIVIQGDVKDDLFDVIPE 179 (266)
Q Consensus 129 ~IsGLE~FgIDLKeLAK~LKKKFACGgSVk--g~--~EI~IQGD~rdkV~elL~e 179 (266)
+|+|... |+=.-.....++++++-.|.|. .+ =||++||+ .+.|.+|+..
T Consensus 17 ~V~G~VQ-GVGFR~~v~~~A~~lgL~G~VrN~~dG~Vei~~eG~-~~~l~~f~~~ 69 (98)
T 3trg_A 17 TVSGKVQ-GVFFRESVRKKAEELQLTGWVKNLSHGDVELVACGE-RDSIMILTEW 69 (98)
T ss_dssp EEEEECS-SSCHHHHHHHHHHHTTCEEEEEECTTSCEEEEEEEE-HHHHHHHHHH
T ss_pred EEEEeEC-CCCccHHHHHHHHHcCCeEEEEECCCCEEEEEEEEC-HHHHHHHHHH
Confidence 3788766 8999999999999999999998 22 38999998 4445555444
No 14
>1aps_A Acylphosphatase; hydrolase(acting on acid anhydrides); NMR {Equus caballus} SCOP: d.58.10.1
Probab=54.46 E-value=10 Score=28.60 Aligned_cols=47 Identities=6% Similarity=-0.100 Sum_probs=35.0
Q ss_pred eEeccCCCCCCHHHHHHHHhccccceeeec--CCc--EEEEcCCchhHHHHhh
Q psy14668 129 YTEAQFPLSSDPIVASKFFGTRFACGSSVT--GDD--EIVIQGDVKDDLFDVI 177 (266)
Q Consensus 129 ~IsGLE~FgIDLKeLAK~LKKKFACGgSVk--g~~--EI~IQGD~rdkV~elL 177 (266)
+|+|... |+=.-.....++++++-.|.|. .++ ||++||+-. .|.+++
T Consensus 12 ~V~G~VQ-GVGFR~~v~~~A~~lgL~G~V~N~~dG~Vei~~eG~~~-~l~~f~ 62 (98)
T 1aps_A 12 EVFGRVQ-GVCFRMYAEDEARKIGVVGWVKNTSKGTVTGQVQGPEE-KVNSMK 62 (98)
T ss_dssp EEECTTS-CCCCTTHHHHHHHHHTCEEEEECCTTCEEEEEEEEEHH-HHHHHH
T ss_pred EEEEEEC-CcCHHHHHHHHHHHcCCeEEEEECCCCcEEEEEEeCHH-HHHHHH
Confidence 3778765 7777788888889999999997 234 999999853 344443
No 15
>2g2k_A EIF-5, eukaryotic translation initiation factor 5; EIF125 fold; NMR {Homo sapiens}
Probab=54.12 E-value=4.9 Score=34.33 Aligned_cols=43 Identities=14% Similarity=0.422 Sum_probs=33.6
Q ss_pred CHHHHHHHHhccccceeeecC-CcEEEEcCCchhHHHHhhhhhC
Q psy14668 139 DPIVASKFFGTRFACGSSVTG-DDEIVIQGDVKDDLFDVIPEKW 181 (266)
Q Consensus 139 DLKeLAK~LKKKFACGgSVkg-~~EI~IQGD~rdkV~elL~eKy 181 (266)
+++-+.|.|...+|+.|++.+ ++..+|+|.|..+.++-+.+.|
T Consensus 49 ~p~hv~kyf~~ELGt~g~id~~~~rliinG~~~~~~i~~~L~~y 92 (170)
T 2g2k_A 49 PPTYPTKYFGCELGAQTQFDVKNDRYIVNGSHEANKLQDMLDGF 92 (170)
T ss_dssp CCTTTHHHHHHHTTCCCEECTTTCCEEEEBCCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhCCceeecCCCCEEEEEeeeCHHHHHHHHHHH
Confidence 344455667788999999974 6899999999988887776665
No 16
>3cw2_K Translation initiation factor 2 subunit beta; AIF2, intact AIF2, initiation factor 2 alpha subunit, initiation factor 2 beta subunit; 2.80A {Sulfolobus solfataricus} PDB: 2nxu_A 2qmu_C* 3v11_C*
Probab=53.48 E-value=1.1 Score=37.06 Aligned_cols=54 Identities=17% Similarity=0.324 Sum_probs=43.8
Q ss_pred eeEeccCCC----CCCHHHHHHHHhccccceeeecCCcEEEEcCCchhHHHHhhhhhC
Q psy14668 128 SYTEAQFPL----SSDPIVASKFFGTRFACGSSVTGDDEIVIQGDVKDDLFDVIPEKW 181 (266)
Q Consensus 128 T~IsGLE~F----gIDLKeLAK~LKKKFACGgSVkg~~EI~IQGD~rdkV~elL~eKy 181 (266)
|+|.+|... .=+++-+.|.|...+|+.|++.+++..+|||.|..+-++-+.++|
T Consensus 42 Tvi~Nf~dIa~~L~R~p~hv~ky~~~ELGt~g~id~~~rlii~G~~~~~~i~~~L~~y 99 (139)
T 3cw2_K 42 TIIRNFAEYCDRIRREDKICMKYLLKELAAPGNVDDKGELVIQGKFSSQVINTLMERF 99 (139)
T ss_dssp CCCSCSSSTTTTTSSCCTTTHHHHSCCSSCCCCCSSSCCCTTTCSCCSCCSCSTTTTT
T ss_pred EEEEcHHHHHHHHCCCHHHHHHHHHHHhCCceEECCCCeEEEEeeeCHHHHHHHHHHH
Confidence 557777665 236888999999999999999767899999999987777666655
No 17
>1k8b_A EIF-2-beta, probable translation initiation factor 2 beta subunit; N-terminal domain, AIF2 subunit beta; NMR {Methanocaldococcus jannaschii} SCOP: d.241.1.1
Probab=49.08 E-value=15 Score=25.69 Aligned_cols=40 Identities=10% Similarity=0.153 Sum_probs=30.4
Q ss_pred eeEeccCCC----CCCHHHHHHHHhccccceeeecCCcEEEEcCC
Q psy14668 128 SYTEAQFPL----SSDPIVASKFFGTRFACGSSVTGDDEIVIQGD 168 (266)
Q Consensus 128 T~IsGLE~F----gIDLKeLAK~LKKKFACGgSVkg~~EI~IQGD 168 (266)
|++.+|... .=|++-+.|.|.+.+|+.|++. ++..+|+|.
T Consensus 9 Tvi~Nf~~Ia~~L~R~p~hv~ky~~~ELGt~g~id-~~rlii~G~ 52 (52)
T 1k8b_A 9 TIIRNFRELAKAVNRDEEFFAKYLLKETGSAGNLE-GGRLILQRR 52 (52)
T ss_dssp EEECCHHHHHHHHHTCHHHHHHHHHHHHSSEEEEE-TTEEEEECC
T ss_pred EEEECHHHHHHHHCCCHHHHHHHHHHHhCCCeeec-CCEEEEeCC
Confidence 445555433 2367788889999999999997 689999984
No 18
>2gv1_A Probable acylphosphatase; globular alpha-helix/beta-sheet protein, hydrolase; NMR {Escherichia coli}
Probab=48.45 E-value=22 Score=26.40 Aligned_cols=47 Identities=13% Similarity=0.201 Sum_probs=33.9
Q ss_pred EeccCCCCCCHHHHHHHHhccccceeeec--CCc--EEEEcCCch--hHHHHhh
Q psy14668 130 TEAQFPLSSDPIVASKFFGTRFACGSSVT--GDD--EIVIQGDVK--DDLFDVI 177 (266)
Q Consensus 130 IsGLE~FgIDLKeLAK~LKKKFACGgSVk--g~~--EI~IQGD~r--dkV~elL 177 (266)
|+|... |+-.-.....++++++-.|.|. .++ ||++||+-. ++..+.|
T Consensus 10 V~G~VQ-GVGFR~~v~~~A~~lgL~G~V~N~~dG~Vei~~eG~~~~i~~f~~~l 62 (92)
T 2gv1_A 10 VYGRVQ-GVGFRYTTQYEAKRLGLTGYAKNLDDGSVEVVACGEEGQVEKLMQWL 62 (92)
T ss_dssp EEEECT-TTTCCSHHHHHHHHHTCCCEEEECSSSCEEEEECSCHHHHHHHHHHH
T ss_pred EEEeeC-CcCHHHHHHHHHHHcCCeEEEEECCCCcEEEEEEeCHHHHHHHHHHh
Confidence 677655 6666777888888889999997 234 999999863 3444444
No 19
>1ulr_A Putative acylphosphatase; hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: d.58.10.1
Probab=48.16 E-value=53 Score=24.13 Aligned_cols=49 Identities=6% Similarity=0.053 Sum_probs=38.1
Q ss_pred eEeccCCCCCCHHHHHHHHhccccceeeec---CC-cEEEEcCCch--hHHHHhhh
Q psy14668 129 YTEAQFPLSSDPIVASKFFGTRFACGSSVT---GD-DEIVIQGDVK--DDLFDVIP 178 (266)
Q Consensus 129 ~IsGLE~FgIDLKeLAK~LKKKFACGgSVk---g~-~EI~IQGD~r--dkV~elL~ 178 (266)
.|+|... |+-.......++++++-.|.|. ++ =||++||+-. ++..+.|.
T Consensus 7 ~v~G~VQ-GVGFR~~v~~~A~~lgl~G~V~N~~dG~Vei~~eG~~~~i~~f~~~l~ 61 (88)
T 1ulr_A 7 LVKGRVQ-GVGYRAFAQKKALELGLSGYAENLPDGRVEVVAEGPKEALELFLHHLK 61 (88)
T ss_dssp EEEEECS-SSSHHHHHHHHHHHTTCEEEEEECTTSCEEEEEESCHHHHHHHHHHHH
T ss_pred EEEEeEC-CcCHHHHHHHHHHHcCCeEEEEECCCCcEEEEEEeCHHHHHHHHHHHH
Confidence 3778666 7888999999999999999997 22 4999999863 45555555
No 20
>2bjd_A Acylphosphatase; hyperthermophIle, hydrolase; 1.27A {Sulfolobus solfataricus} PDB: 2bje_A 1y9o_A
Probab=40.86 E-value=55 Score=24.89 Aligned_cols=49 Identities=12% Similarity=0.062 Sum_probs=37.6
Q ss_pred eEeccCCCCCCHHHHHHHHhccccceeeec--CC--cEEEEcCCchhHHHHhhhh
Q psy14668 129 YTEAQFPLSSDPIVASKFFGTRFACGSSVT--GD--DEIVIQGDVKDDLFDVIPE 179 (266)
Q Consensus 129 ~IsGLE~FgIDLKeLAK~LKKKFACGgSVk--g~--~EI~IQGD~rdkV~elL~e 179 (266)
+|+|..+ |+-.......++++++-.|.|. .+ =||++||+-. .|.+++..
T Consensus 19 ~V~G~VQ-GVGFR~~v~~~A~~lgL~G~V~N~~dG~Vei~~eG~~~-~i~~f~~~ 71 (101)
T 2bjd_A 19 RVYGLVQ-GVGFRKFVQIHAIRLGIKGYAKNLPDGSVEVVAEGYEE-ALSKLLER 71 (101)
T ss_dssp EEEEECS-SSSHHHHHHHHHHHTTCEEEEEECTTSCEEEEEEEEHH-HHHHHHHH
T ss_pred EEEEeEC-CcCHHHHHHHHHHHcCCeEEEEECCCCcEEEEEEeCHH-HHHHHHHH
Confidence 3788766 8999999999999999999997 22 4999999853 34444433
No 21
>1w2i_A Acylphosphatase; hydrolase, thermophilic, stability, amyloid; 1.5A {Pyrococcus horikoshii} SCOP: d.58.10.1 PDB: 1v3z_A 2w4d_A
Probab=40.47 E-value=56 Score=24.21 Aligned_cols=49 Identities=12% Similarity=0.064 Sum_probs=37.4
Q ss_pred eEeccCCCCCCHHHHHHHHhccccceeeec---CC-cEEEEcCCch--hHHHHhhh
Q psy14668 129 YTEAQFPLSSDPIVASKFFGTRFACGSSVT---GD-DEIVIQGDVK--DDLFDVIP 178 (266)
Q Consensus 129 ~IsGLE~FgIDLKeLAK~LKKKFACGgSVk---g~-~EI~IQGD~r--dkV~elL~ 178 (266)
.|+|... |+-.......++++++-.|.|. ++ =||++||+-. ++..+.|.
T Consensus 9 ~V~G~VQ-GVGFR~~v~~~A~~lgL~G~V~N~~dG~Vei~~~G~~~~v~~f~~~l~ 63 (91)
T 1w2i_A 9 KIYGRVQ-GVGFRWSMQREARKLGVNGWVRNLPDGSVEAVLEGDEERVEALIGWAH 63 (91)
T ss_dssp EEEEECS-SSSHHHHHHHHHHHHTCEEEEEECTTSCEEEEEEEEHHHHHHHHHHTT
T ss_pred EEEEEEC-CcCHHHHHHHHHHHcCCeEEEEECCCCCEEEEEEeCHHHHHHHHHHHH
Confidence 3788766 7889999999999999999997 22 4999999864 34444443
No 22
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=27.90 E-value=1.1e+02 Score=30.95 Aligned_cols=51 Identities=10% Similarity=-0.009 Sum_probs=39.3
Q ss_pred eEeccCCCCCCHHHHHHHHhccccceeeec--CC-cEEEEcCCc--hhHHHHhhhhh
Q psy14668 129 YTEAQFPLSSDPIVASKFFGTRFACGSSVT--GD-DEIVIQGDV--KDDLFDVIPEK 180 (266)
Q Consensus 129 ~IsGLE~FgIDLKeLAK~LKKKFACGgSVk--g~-~EI~IQGD~--rdkV~elL~eK 180 (266)
+|+|..+ |+=.....+.++++++-.|.|. .+ =||++||+- .++..+.|.++
T Consensus 15 ~V~G~VQ-GVGFR~~v~~~A~~lgL~G~V~N~~dGVei~~eG~~~~l~~f~~~L~~~ 70 (761)
T 3vth_A 15 NIFGIVQ-GVGFRPFVFNIAQKYNLKGIVYNNSSGLYIEVEGEEKDIEAFIREIKEN 70 (761)
T ss_dssp EEEEECS-SSSHHHHHHHHHHHTTCEEEEEEETTEEEEEEEECHHHHHHHHHHHHHS
T ss_pred EEEEEeC-CcCcHHHHHHHHHHcCCeEEEEECCCeEEEEEEECHHHHHHHHHHHhcC
Confidence 4899776 8999999999999999999998 22 499999984 23444445433
No 23
>3mf7_A CIS-3-chloroacrylic acid dehalogenase; beta-alpha-beta motif, tautomerase, CIS-3-CHLO acid dehalogenase, isomerase, hydrolase; HET: PR4; 1.65A {Coryneform bacterium} PDB: 3mf8_A 2flt_A 2flz_A
Probab=25.45 E-value=40 Score=27.23 Aligned_cols=57 Identities=23% Similarity=0.273 Sum_probs=36.3
Q ss_pred cceeeecCCcEEEEcCCc------------hhHHHHhhhhhCCCCCcCceEE-cCccCCCcccccceecCc
Q psy14668 152 ACGSSVTGDDEIVIQGDV------------KDDLFDVIPEKWPEIDEDFIED-LGDLKSPTYNIAYYVLPT 209 (266)
Q Consensus 152 ACGgSVkg~~EI~IQGD~------------rdkV~elL~eKypGIpek~Iev-ldkkKKkK~n~~~~~lp~ 209 (266)
+.||--..++-|.||.+. -.+|.+.|.+.. |++++.+.+ +.+..+.-+..+|..+|+
T Consensus 52 ~~gG~~rsd~~v~I~i~~~~GRt~eqK~~L~~~I~~~l~~~~-g~~~edV~V~i~e~~~~~~~~~G~~~P~ 121 (149)
T 3mf7_A 52 FLGGVQQGGDTIFVHGLHREGRSADLKGQLAQRIVDDVSVAA-EIDRKHIWVYFGEMPAQQMVEYGRFLPQ 121 (149)
T ss_dssp EETTEECCSCCEEEEEEEESCCCHHHHHHHHHHHHHHHHHHT-TCCGGGEEEEEEEECGGGCCCSSCC---
T ss_pred EECCEEcCCCEEEEEEEecCCCCHHHHHHHHHHHHHHHHHHc-CCChhhEEEEEEEcCHHHHHhcCeeCCC
Confidence 443333233566666542 234555555555 999999988 888888899999999995
No 24
>1in0_A YAJQ protein, HI1034; alpha and beta sandwich, structural genomics, structure 2 function project, S2F, unknown function; 2.14A {Haemophilus influenzae} SCOP: d.58.49.1 d.58.49.1
Probab=22.82 E-value=1.1e+02 Score=26.13 Aligned_cols=53 Identities=13% Similarity=0.284 Sum_probs=38.8
Q ss_pred HHHHHHHhcccc---ceeeec---CCcEEEEcCCch---hHHHHhhhhhC--CCCCcCceEEcC
Q psy14668 141 IVASKFFGTRFA---CGSSVT---GDDEIVIQGDVK---DDLFDVIPEKW--PEIDEDFIEDLG 193 (266)
Q Consensus 141 KeLAK~LKKKFA---CGgSVk---g~~EI~IQGD~r---dkV~elL~eKy--pGIpek~Ievld 193 (266)
..+.|++.++|- +++++. ++.+|.|..|-. +.+.++|..++ .||+.+.++..+
T Consensus 20 ~qa~kEi~~RfDFKgs~a~iel~~k~~~i~l~a~~d~kl~qv~DiL~~kl~KRgid~k~ld~~~ 83 (163)
T 1in0_A 20 ENANRVLSTRYDFRGVEAVIELNEKNETIKITTESDFQLEQLIEILIGSCIKRGIEHSSLDIPA 83 (163)
T ss_dssp HHHHHHHTTBGGGTTCCEEEEEETTTTEEEEEESCHHHHHHHHHHHHHHHHHTTCCGGGEECCS
T ss_pred HHHHHHHhcccccCCCccEEEEcCCCcEEEEEeCCHHHHHHHHHHHHHHHHHcCCCchhcccCC
Confidence 445899999986 888887 236899998874 44456777554 499999888743
Done!