Query psy14673
Match_columns 912
No_of_seqs 459 out of 1965
Neff 8.0
Searched_HMMs 29240
Date Fri Aug 16 17:41:51 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14673.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14673hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3eh1_A Protein transport prote 100.0 4E-140 1E-144 1266.4 67.4 658 245-903 70-751 (751)
2 3efo_B SEC24 related gene fami 100.0 1E-132 3E-137 1207.0 64.2 629 267-906 119-770 (770)
3 3eh2_A Protein transport prote 100.0 2E-132 6E-137 1204.3 65.2 629 267-906 115-766 (766)
4 1m2v_B SEC24, protein transpor 100.0 2E-130 6E-135 1197.6 60.5 633 267-902 249-925 (926)
5 1pcx_A Protein transport prote 100.0 1E-128 5E-133 1178.4 62.8 633 267-902 133-809 (810)
6 1m2o_A SEC23, protein transpor 100.0 3E-114 1E-118 1049.8 56.4 615 245-904 39-766 (768)
7 2nut_A Protein transport prote 100.0 3E-112 1E-116 1031.2 57.5 615 245-904 48-767 (769)
8 4fx5_A VON willebrand factor t 99.3 5.7E-09 2E-13 120.0 35.6 306 313-680 76-408 (464)
9 3ibs_A Conserved hypothetical 98.8 1.9E-07 6.5E-12 96.2 18.8 174 311-548 8-212 (218)
10 1ijb_A VON willebrand factor; 98.4 8.5E-06 2.9E-10 82.9 17.9 162 314-532 13-183 (202)
11 1q0p_A Complement factor B; VO 98.4 9.1E-06 3.1E-10 83.6 17.7 172 311-531 12-206 (223)
12 1shu_X Anthrax toxin receptor 98.3 1.2E-05 4.1E-10 80.0 17.3 159 313-531 5-168 (182)
13 4b4t_W RPN10, 26S proteasome r 98.3 8E-07 2.7E-11 93.7 8.1 148 316-522 5-163 (268)
14 4hqf_A Thrombospondin-related 98.3 7.7E-06 2.6E-10 87.8 15.9 166 313-532 20-197 (281)
15 3n2n_F Anthrax toxin receptor 98.3 8.8E-06 3E-10 81.2 14.7 158 313-531 6-171 (185)
16 1atz_A VON willebrand factor; 98.3 1.7E-05 5.8E-10 79.6 16.1 158 313-531 4-171 (189)
17 1n3y_A Integrin alpha-X; alpha 98.3 6.9E-06 2.4E-10 83.0 13.2 161 313-532 8-181 (198)
18 1v7p_C Integrin alpha-2; snake 98.2 2E-05 6.8E-10 79.9 16.6 161 313-532 5-183 (200)
19 4hqo_A Sporozoite surface prot 98.2 8E-06 2.7E-10 87.0 14.1 166 313-531 17-193 (266)
20 1mf7_A Integrin alpha M; cell 98.2 6.3E-06 2.1E-10 83.2 12.5 161 313-532 4-177 (194)
21 2b2x_A Integrin alpha-1; compu 98.2 1.8E-05 6.2E-10 81.7 15.9 161 313-532 21-199 (223)
22 2x31_A Magnesium-chelatase 60 98.1 1.5E-07 5.3E-12 94.7 -1.8 176 313-548 4-186 (189)
23 1pt6_A Integrin alpha-1; cell 98.1 3.1E-05 1E-09 79.3 15.4 161 313-532 6-184 (213)
24 1rrk_A Complement factor B; BB 98.1 4.4E-05 1.5E-09 88.8 18.1 168 315-531 2-192 (497)
25 2odp_A Complement C2; C3/C5 co 98.1 2.6E-05 8.9E-10 91.0 16.0 167 311-531 6-200 (509)
26 2x5n_A SPRPN10, 26S proteasome 98.1 1.2E-05 4.3E-10 80.9 11.1 141 316-519 4-158 (192)
27 4b8c_D Glucose-repressible alc 98.1 4.9E-07 1.7E-11 110.3 -0.3 14 722-735 600-613 (727)
28 1mjn_A Integrin alpha-L; rossm 98.0 8.6E-05 3E-09 73.8 15.2 152 314-532 2-167 (179)
29 4b8c_D Glucose-repressible alc 97.9 7.7E-07 2.6E-11 108.6 -2.1 11 626-636 547-557 (727)
30 3hrz_D Complement factor B; se 97.8 8.7E-05 3E-09 90.8 12.8 181 311-531 240-434 (741)
31 1jey_B KU80; double-strand DNA 97.7 3.8E-05 1.3E-09 90.6 7.6 145 315-506 8-170 (565)
32 3zqk_A VON willebrand factor; 97.7 0.00079 2.7E-08 68.0 15.8 153 312-532 19-181 (199)
33 2xgg_A Microneme protein 2; A/ 97.7 0.00055 1.9E-08 67.8 14.4 144 313-513 16-168 (178)
34 3k6s_A Integrin alpha-X; cell 97.5 0.0002 6.7E-09 90.6 10.2 160 314-532 130-302 (1095)
35 1kcq_A Gelsolin, brevin, ADF, 97.5 0.0005 1.7E-08 61.8 10.0 88 753-879 2-90 (104)
36 3fg7_A Villin-1; actin binding 97.2 0.0011 3.6E-08 74.2 10.3 109 752-893 281-392 (398)
37 1svq_A Severin; actin-binding; 97.1 0.00078 2.7E-08 61.6 6.8 89 753-879 12-101 (114)
38 2fh1_A Gelsolin; calcium, cont 96.6 0.0041 1.4E-07 68.4 8.7 113 752-896 227-341 (344)
39 1jey_A KU70; double-strand DNA 96.6 0.02 6.9E-07 67.9 15.1 149 315-506 36-208 (609)
40 3fg6_A Adseverin, scinderin; C 96.4 0.0039 1.3E-07 69.2 6.7 55 752-814 268-322 (371)
41 2ww8_A RRGA, cell WALL surface 95.8 0.015 5.2E-07 71.4 8.6 146 312-457 222-394 (893)
42 1d0n_A Horse plasma gelsolin; 95.7 0.02 6.8E-07 69.3 9.3 90 750-871 610-700 (729)
43 1j72_A Macrophage capping prot 95.5 0.035 1.2E-06 61.0 9.6 57 752-814 246-304 (347)
44 3rag_A Uncharacterized protein 95.2 0.039 1.3E-06 56.7 7.8 93 313-439 133-226 (242)
45 3t3p_B Integrin beta-3; integr 94.6 7.7 0.00026 43.6 25.1 269 312-603 109-403 (472)
46 3fcs_B Integrin beta-3; beta p 94.5 1.1 3.8E-05 53.4 19.0 269 312-603 109-403 (690)
47 1yvr_A RO autoantigen, 60-kDa 94.4 0.064 2.2E-06 62.6 8.3 108 311-456 365-475 (538)
48 1j72_A Macrophage capping prot 94.0 0.14 4.9E-06 56.1 9.4 88 753-879 135-223 (347)
49 3vi3_B Integrin beta-1; beta p 93.3 2.5 8.5E-05 47.2 17.7 269 312-603 120-412 (454)
50 3v4v_B Integrin beta-7; cell a 93.1 7.9 0.00027 43.8 21.6 272 312-603 130-426 (503)
51 3k6s_B Integrin beta-2; cell r 91.8 0.34 1.2E-05 57.6 8.8 203 312-528 102-324 (687)
52 3fg6_A Adseverin, scinderin; C 91.7 0.51 1.7E-05 52.1 9.7 52 753-813 165-217 (371)
53 1d0n_A Horse plasma gelsolin; 91.7 0.36 1.2E-05 58.3 9.0 88 753-879 133-221 (729)
54 2fh1_A Gelsolin; calcium, cont 90.8 0.48 1.7E-05 51.7 8.3 52 753-813 124-175 (344)
55 2nvo_A RO sixty-related protei 88.0 0.69 2.4E-05 53.7 7.2 108 311-456 359-471 (535)
56 2iue_A Pactolus I-domain; memb 80.0 5.4 0.00019 40.0 8.7 46 314-363 3-51 (212)
57 2yrc_A Protein transport prote 76.7 0.87 3E-05 35.8 1.3 19 267-285 32-50 (59)
58 3fg7_A Villin-1; actin binding 70.0 0.92 3.2E-05 50.4 0.0 34 780-813 196-229 (398)
59 3rag_A Uncharacterized protein 63.9 11 0.00039 38.4 6.6 63 441-528 9-75 (242)
60 1b3t_A Protein (nuclear protei 52.7 31 0.0011 30.8 6.5 33 333-365 112-145 (147)
No 1
>3eh1_A Protein transport protein SEC24B; copii coat protein, vesicle transport, transport signal sequence, cytoplasm, endoplasmic reticulum; 1.80A {Homo sapiens} PDB: 2nut_B 2nup_B 3egd_B 3egx_B
Probab=100.00 E-value=4.2e-140 Score=1266.37 Aligned_cols=658 Identities=50% Similarity=0.845 Sum_probs=618.3
Q ss_pred ccccCCCCCCCcCCCCCCCCC-------------CCcCccCcccccCCCCCCC---------CCCCCccccccccEEEEe
Q psy14673 245 LLNTRDILPATKVEPPPIRLP-------------QNLPEIHEQFLYDRNTEMF---------GDPYRRPEIQSATVEYLA 302 (912)
Q Consensus 245 pl~~r~~lP~~~~~P~~~~~~-------------~~~~~~p~~~~~~~~~~~~---------~d~~~rpEL~~~tvEy~~ 302 (912)
|+.+...+|.+.+.+|++|.+ ++.|.||+|+..|.++..| +|.+.||||++|||||++
T Consensus 70 Pl~~~~~~P~v~~~~p~RC~rCrayiNPf~~f~~~~~w~Cn~C~~~N~~P~~y~~~~~~~~~~d~~~rpEL~~~tvEy~~ 149 (751)
T 3eh1_A 70 PFRDLTQLPVITSNTIVRCRSCRTYINPFVSFIDQRRWKCNLCYRVNDVPEEFMYNPLTRSYGEPHKRPEVQNSTVEFIA 149 (751)
T ss_dssp TTCCCSCCCEECCSCCCBCTTTCCBCCTTCEESSSSEEECTTTCCEEECCGGGC---------CGGGSHHHHCSEEEEEE
T ss_pred cCCcCCCCCccCCCCCCcccCccCEeCCceEEecCCEEEcccccCCCCCCHHHhcccccccccCcccCchhccceEEEEc
Confidence 777777788777776668865 2789999999887665544 578999999999999999
Q ss_pred cccccCCCCCCCcEEEEEEEccHhHHhhchHHHHHHHHHHHHhcCCCCCCceEEEEEEccEEEEEEcCCCCCCCceeecc
Q psy14673 303 TADYTVRDPPQPAMYLFLLDVSQIAAQSGYLYTVCEVLLNQLKSMPGDRRTSIAIITYDSAVHFYSLAEGQTQPSQMILT 382 (912)
Q Consensus 303 p~~y~~r~~~~pp~~vFvID~s~~a~~~g~l~~~~~si~~~L~~lp~~~~~~VglITfd~~V~~y~l~~~~~~~~~~vv~ 382 (912)
|++|+.| +|.||+|+||||||..++++|+++++|++|+++|+.||+++|++|||||||++||||+++.+.++++|+|++
T Consensus 150 p~~y~~r-~p~pp~yvFvIDvs~~a~~~g~l~~~~~sl~~~L~~lp~~~~~~VG~ITfd~~vh~y~l~~~~~~~qmlvv~ 228 (751)
T 3eh1_A 150 SSDYMLR-PPQPAVYLFVLDVSHNAVEAGYLTILCQSLLENLDKLPGDSRTRIGFMTFDSTIHFYNLQEGLSQPQMLIVS 228 (751)
T ss_dssp CGGGCSS-SCCCCEEEEEEECSHHHHHHTHHHHHHHHHHHHTTTSSCCTTCEEEEEEESSSEEEEECCTTCSSCEEEEES
T ss_pred ChhhhcC-CCCCcEEEEEEEccHhhhhhhHHHHHHHHHHHHHHhcCCCcCcEEEEEEeCCEEEEEECCCCcccceeeccc
Confidence 9999999 999999999999999999999999999999999999999999999999999999999999988899999999
Q ss_pred CccccCCCCCCCcccchhHhHHHHHHHHHhCCccccCCCCCCCcHHHHHHHHHHhhcCCCCEEEEEecCCCCCCCCcccC
Q psy14673 383 DIDDIFLPSPENILVNLSECYDMIVDLLKQLPGKFKDSLDSGSALGPALQAAFKLLQPTGGRITIFQTCLPNRGPGALQS 462 (912)
Q Consensus 383 dl~d~f~p~~~~~lv~l~e~~~~i~~lL~~L~~~~~~~~~~~~~~G~AL~~A~~ll~~~GGrI~~f~~g~pt~GpG~l~~ 462 (912)
|++|+|+|.|++|||+++||++.|+++|++|+.+|..++++.+|+|+||++|..+|+..||||++|++|+||.|||+|+.
T Consensus 229 dl~d~f~P~~~~~lv~l~e~~~~i~~lL~~Lp~~~~~~~~~~~~~G~AL~aA~~ll~~~GGrI~~F~sg~pt~GpG~l~~ 308 (751)
T 3eh1_A 229 DIDDVFLPTPDSLLVNLYESKELIKDLLNALPNMFTNTRETHSALGPALQAAFKLMSPTGGRVSVFQTQLPSLGAGLLQS 308 (751)
T ss_dssp CTTCTTSCCGGGTSEETTTTHHHHHHHHHHGGGTSTTCSCCCCCHHHHHHHHHHHHTTTCEEEEEEECSCCCSSTTCCCC
T ss_pred cccccCCCChhhhcccHHHHHHHHHHHHHhhhHhhcCCCCCccchHHHHHHHHHHhhcCCCEEEEEecCCCCCCCCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCC-CCCCCCCchHHHHHHHHHHHhhCCcEEEEEEecCCccChhhhcccccCCCceEEecCCCCC-CCchhHHH
Q psy14673 463 RENPNQRSN-DDPPHMNPATDFYKKIALECTSFYIAVDLFILNSQYVDLATLSGVSKFSSGCIHHIPLYSG-KNMSHVYQ 540 (912)
Q Consensus 463 ~~~~~~~~~-~~~~~~~~~~~fY~~La~~~~~~~isvdlf~~s~~~~~l~~l~~l~~~TGG~v~~~~~f~~-~~~~~~~~ 540 (912)
|++++.++| ||+++++++++||++||.+|+++||+||+|+++.+++|++||+.|++.|||.+++|++|+. .++.+.++
T Consensus 309 r~~~~~~~~~ke~~~~~~a~~fY~~la~~~~~~~i~VDlF~~s~~~~dlatl~~l~~~TGG~v~~y~~F~~~~~~~~~~~ 388 (751)
T 3eh1_A 309 REDPNQRSSTKVVQHLGPATDFYKKLALDCSGQQTAVDLFLLSSQYSDLASLACMSKYSAGCIYYYPSFHYTHNPSQAEK 388 (751)
T ss_dssp CCCSCGGGGSSSCTTCSCSCSHHHHHHHHHHHTTEEEEEEECCSSCCCHHHHTHHHHTTTCCEEECTTCBTTTBHHHHHH
T ss_pred ccccccCCCchhhhhhcchHHHHHHHHHHHHhcCceEEEEEccCcccChHhHHHHHhhcCceEEEeCCcccccchhHHHH
Confidence 988875554 6678999999999999999999999999999999999999999999999999999999994 34456789
Q ss_pred HHHHHHHhhhcccccceeEEEEecCCceEEEEeeceeccCCCceeeccCCCCCeEEEEEEEecccCCCceeEEEEEEEee
Q psy14673 541 LDRMFSRYLTRKIGFESVMRIRCTKGMSIHTFHGNFFVRSTDLLALPNVNPDAGYGIQISIDENLTHIQYACFQVAVLYT 620 (912)
Q Consensus 541 ~~~~l~~~l~~~~g~~a~l~vr~S~gl~i~~~~G~~~~~~t~~~~l~~i~~~~si~~~~~~~~~l~~~~~~~iQ~allYt 620 (912)
|.+||.+.+++++||+|+||||||+||+|++++|||+.+++++|+++++++|++|+|+|++++++.+...+|||+|++||
T Consensus 389 f~~dl~r~l~~~~gf~a~mrVR~S~glkv~~~~G~~~~~~t~~~~l~~i~~d~s~~v~~~~~~~l~~~~~~~~Q~allYT 468 (751)
T 3eh1_A 389 LQKDLKRYLTRKIGFEAVMRIRCTKGLSMHTFHGNFFVRSTDLLSLANINPDAGFAVQLSIEESLTDTSLVCFQTALLYT 468 (751)
T ss_dssp HHHHHHHHHHSCCEEEEEEEEEECTTEEEEEEESSSEECSSSEEEEEEECTTCCEEEEEEESSCCCSCSEEEEEEEEEEE
T ss_pred HHHHHHHHHhhhhccceEEEEEecCCeEEEEeeCCeEeCCCCceEeccCCCCCEEEEEEEEcCCCCCCCceEEEEEEeee
Confidence 99999999999999999999999999999999999999999999999999999999999999998777889999999999
Q ss_pred ecCCCeEEEEEecccccccCHHHHHhccCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcc
Q psy14673 621 SSKGDRRIRVHTLCLPVVSNINDVLVGADQACIAGLLAKMAVDRSLQHSLSDAREAFLNVVCDVLSTYKMTQAGHLTGSL 700 (912)
Q Consensus 621 ~~~G~rriRV~T~~l~vt~~~~~v~~~~D~~a~~~llak~a~~~~~~~~~~~~r~~l~~~li~~l~~yr~~~~~~~~~~l 700 (912)
+.+|+|||||||+++++++++.++|+++|+||++++|||+|+++++++++.|+|+||+++|+++|++||+++....+++|
T Consensus 469 ~~~G~RRiRV~T~~l~vt~~~~~v~~~~DqeA~~~llar~av~~~~~~~l~d~r~~l~~~li~il~~Yr~~~~~~~~~~l 548 (751)
T 3eh1_A 469 SSKGERRIRVHTLCLPVVSSLADVYAGVDVQAAICLLANMAVDRSVSSSLSDARDALVNAVVDSLSAYGSTVSNLQHSAL 548 (751)
T ss_dssp CTTSCEEEEEEEEEEEEECSHHHHHHTBCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTTCC-----CC
T ss_pred cCCCCEEEEEEEecccccCCHHHHHHhcCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHhcccCCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998754444579
Q ss_pred ccCcccChHHHHHHHHhcCccccCCCCCChhHHHHHHHHHcCCChhhhHhhhcceeeecccCCCCCCccccCCcccCCcc
Q psy14673 701 LAPSSLKLLPLYVLALLKHPAFRIGQSTRLDDRLFAMTEMKCLPLNSLMLSIYPELYPIHTLDQDPTIEWNELQVPIPRI 780 (912)
Q Consensus 701 ~lp~~l~~lP~~~~~L~ks~~l~~~~~~s~Der~~~~~~l~~~~~~~~~~~iyP~L~~~~~~~~~~~~~~~~~~~~~P~~ 780 (912)
+||++||+||+||++|+||++|+.+.++++|||+|+|+.++++++..++.||||+||+||++.++++..++++.+++|+.
T Consensus 549 ~lpe~lkllP~~~~~L~Ks~~~~~~~~~s~Der~~~~~~l~~~~~~~~~~~iyP~L~~~h~l~~~~~~~~~~~~~~~P~~ 628 (751)
T 3eh1_A 549 MAPSSLKLFPLYVLALLKQKAFRTGTSTRLDDRVYAMCQIKSQPLVHLMKMIHPNLYRIDRLTDEGAVHVNDRIVPQPPL 628 (751)
T ss_dssp EEEGGGTTHHHHHHHHHTSTTTCCSSCCCHHHHHHHHHHHHHSCHHHHHHHHSCEEEECTTCCSTTCEEETTEEECCCCC
T ss_pred cCcHHHHHHHHHHHHHHccHhhcCCCCCChhHHHHHHHHHhCCCHHHHHhhccceEEEeecCccccCcccCCCccCCCCc
Confidence 99999999999999999999999877899999999999999999999999999999999999888766666666789999
Q ss_pred ccccccccccCeEEEEeCCceEEEEecCCCChhHHhhccCCCCcCCCCcccccCCCCchHHHHHHHHHHHHHhhcCCCcc
Q psy14673 781 LQLSAERLQATGTYLLNMPDLIIILVRHGTSPAICSGLFGFQSVAQMPETLFELPQLETQLSLKLNSFISYLNDDKAYVS 860 (912)
Q Consensus 781 l~Ls~~~l~~~giyLlD~g~~i~i~vg~~v~~~~~~~lfg~~~~~~~~~~~~~lp~~d~~~~~~~~~~i~~l~~~r~~~~ 860 (912)
++||.++|++|||||||+|+.+|||+|++++++++++|||++++.+++..+.+||++|++.|+++|++|+++|+.|.+++
T Consensus 629 l~ls~~~l~~~giyLlD~g~~i~lw~G~~v~~~ll~dlFGv~~~~~~~~~~~~lp~~~t~~s~~vr~ii~~lr~~r~~~~ 708 (751)
T 3eh1_A 629 QKLSAEKLTREGAFLMDCGSVFYIWVGKGCDNNFIEDVLGYTNFASIPQKMTHLPELDTLSSERARSFITWLRDSRPLSP 708 (751)
T ss_dssp BCSSGGGCCTTSEEEEECSSEEEEEECTTCCHHHHHHTTCCSSGGGCCSSBCCCCCCSSHHHHHHHHHHHHHHHTSSSCC
T ss_pred ccCCHHHcccCCEEEEECCCEEEEEECCCCCHHHHHHHcCCCchhhcCcccccCCCCCCHHHHHHHHHHHHHHhcCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988878
Q ss_pred cEEEEeCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHh
Q psy14673 861 PVKVIKDSSPDRMEFYDKLIEDKNAGGMAYYEFLLRIRDYQAS 903 (912)
Q Consensus 861 p~~iv~~~~~~~~~f~~~lveD~~~~~~Sy~~fl~~l~~~i~~ 903 (912)
.++||+++++.+.+|..+||||++++.+||.|||++||++|.+
T Consensus 709 ~l~vvr~~~~~~~~f~~~LvED~~~~~~SY~~fL~~~h~~i~~ 751 (751)
T 3eh1_A 709 ILHIVKDESPAKAEFFQHLIEDRTEAAFSYYEFLLHVQQQICK 751 (751)
T ss_dssp EEEEEESSSSSHHHHHTTCTTSCBTTBCCHHHHHHHHHHHHHC
T ss_pred eEEEEeCCCchHHHHHHhCcccCCCCCCCHHHHHHHHHHHhcC
Confidence 8999999999999999999999999999999999999999863
No 2
>3efo_B SEC24 related gene family, member D; copii, coat protein, transport signal, disease mutation, endoplasmic reticulum, ER-golgi transport, golgi apparatus, membrane; 2.70A {Homo sapiens} PDB: 3eg9_B
Probab=100.00 E-value=1e-132 Score=1206.99 Aligned_cols=629 Identities=27% Similarity=0.509 Sum_probs=591.6
Q ss_pred CcCccCcccccCCCCCCC----------CCCCCccccccccEEEEeccccc--CCCCCCCcEEEEEEEccHhHHhhchHH
Q psy14673 267 NLPEIHEQFLYDRNTEMF----------GDPYRRPEIQSATVEYLATADYT--VRDPPQPAMYLFLLDVSQIAAQSGYLY 334 (912)
Q Consensus 267 ~~~~~p~~~~~~~~~~~~----------~d~~~rpEL~~~tvEy~~p~~y~--~r~~~~pp~~vFvID~s~~a~~~g~l~ 334 (912)
+.|.||+|+..|.++..| .|.++||||.+|||||++|.||+ .| +|.||+|+||||||.+++++|+++
T Consensus 119 ~~w~Cn~C~~~N~~P~~Y~~~l~~~g~r~d~~~rpEL~~~tvEf~ap~eY~~~~~-~p~pp~y~FvIDvs~~av~sg~l~ 197 (770)
T 3efo_B 119 RRYQCGFCNCVNDVPPFYFQHLDHIGRRLDHYEKPELSLGSYEYVATLDYCRKSK-PPNPPAFIFMIDVSYSNIKNGLVK 197 (770)
T ss_dssp TEEECTTTCCEEECCGGGCCCCCSSSCTTTGGGSHHHHCSEEEEECCGGGSGGGS-CCCCCEEEEEEECSHHHHHTTHHH
T ss_pred CEEEeccccccCCCchHhhccccccccccccccCcccccCceeeecCHHHhccCC-CCCCcEEEEEEEcchhhccchHHH
Confidence 789999999877655444 36789999999999999999998 46 899999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCC-----CceEEEEEEccEEEEEEcCCCCCCCceeeccCccccCCCCCCCcccchhHhHHHHHHH
Q psy14673 335 TVCEVLLNQLKSMPGDR-----RTSIAIITYDSAVHFYSLAEGQTQPSQMILTDIDDIFLPSPENILVNLSECYDMIVDL 409 (912)
Q Consensus 335 ~~~~si~~~L~~lp~~~-----~~~VglITfd~~V~~y~l~~~~~~~~~~vv~dl~d~f~p~~~~~lv~l~e~~~~i~~l 409 (912)
++|++|+++|+.||+++ |++|||||||++||||+++.+.++++|+|++|++|+|+|++++|||+++||++.|+++
T Consensus 198 ~~~~sl~~~L~~lP~~~~~~~~~~~VG~ITfd~~vh~y~l~~~~~q~q~~vv~d~~d~f~P~~~~~Lv~l~e~~~~i~~l 277 (770)
T 3efo_B 198 LICEELKTMLEKIPKEEQEETSAIRVGFITYNKVLHFFNVKSNLAQPQMMVVTDVGEVFVPLLDGFLVNYQESQSVIHNL 277 (770)
T ss_dssp HHHHHHHHHGGGCCCCTTSSSCSCEEEEEEESSSEEEEECCTTCSSCEEEEECCTTSCCCCCSSSSSBCTTTTHHHHHHH
T ss_pred HHHHHHHHHHHhCCccccccCccceEEEEEeCCEEEEEeCCCcccCceEEEecccccccCCCccceeeeHHHHHHHHHHH
Confidence 99999999999999753 6899999999999999999988899999999999999999999999999999999999
Q ss_pred HHhCCccccCCCCCCCcHHHHHHHHHHhhcC--CCCEEEEEecCCCC-CCCCcccCCCCCCCC-CCCCCCCCCchHHHHH
Q psy14673 410 LKQLPGKFKDSLDSGSALGPALQAAFKLLQP--TGGRITIFQTCLPN-RGPGALQSRENPNQR-SNDDPPHMNPATDFYK 485 (912)
Q Consensus 410 L~~L~~~~~~~~~~~~~~G~AL~~A~~ll~~--~GGrI~~f~~g~pt-~GpG~l~~~~~~~~~-~~~~~~~~~~~~~fY~ 485 (912)
|++|+++|...+.+.+|+|+||.+|+.+++. .||||++|++|+|+ .|||+|+.|+++... ++||+++++++++||+
T Consensus 278 L~~L~~~~~~~~~~~t~~g~al~aa~~~l~~~~~GGkI~~F~s~lP~t~GpG~l~~r~~~~~~~t~ke~~~~~~a~~fY~ 357 (770)
T 3efo_B 278 LDQIPDMFADSNENETVFAPVIQAGMEALKAADCPGKLFIFHSSLPTAEAPGKLKNRDDKKLVNTDKEKILFQPQTNVYD 357 (770)
T ss_dssp HHHHHHHHHTCCCCCCCCHHHHHHHHHHHHHHTCCEEEEEEECSCCCSSSTTCCCCCCCCCCSSCSCGGGGGSCSSSHHH
T ss_pred HHhhHhhccCCCCCcchHHHHHHHHHHHhccCCCCcEEEEEecCCCCcCCCccccccccccccCCcchhhhhcchHHHHH
Confidence 9999999988888899999999999999974 79999999999776 899999999876653 5677889999999999
Q ss_pred HHHHHHhhCCcEEEEEEecCCccChhhhcccccCCCceEEecCCCCCCCchhHHHHHHHHHHhhhcccccceeEEEEecC
Q psy14673 486 KIALECTSFYIAVDLFILNSQYVDLATLSGVSKFSSGCIHHIPLYSGKNMSHVYQLDRMFSRYLTRKIGFESVMRIRCTK 565 (912)
Q Consensus 486 ~La~~~~~~~isvdlf~~s~~~~~l~~l~~l~~~TGG~v~~~~~f~~~~~~~~~~~~~~l~~~l~~~~g~~a~l~vr~S~ 565 (912)
+||.+|+++||+||||+++.+++|++||+.|++.|||.+++|++|+. ..+.++|.+||.+.+++++||+|+||||||+
T Consensus 358 ~lA~~~~~~~i~VDlF~~s~~~vdlatl~~l~~~TGG~v~~y~~F~~--~~~~~~f~~dl~~~l~~~~gf~a~mrVR~S~ 435 (770)
T 3efo_B 358 SLAKDCVAHGCSVTLFLFPSQYVDVASLGLVPQLTGGTLYKYNNFQM--HLDRQQFLNDLRNDIEKKIGFDAIMRVRTST 435 (770)
T ss_dssp HHHHHHHHTTEEEEEEECCSSCCCHHHHTHHHHHTTCCEEECTTCCH--HHHHHHHHHHHHHHHHSCEEEEEEEEEEECT
T ss_pred HHHHHHHHcCeEEEEEEecCCccChHHHHHHHhhcCceEEEecCCcc--hhHHHHHHHHHHHhhhhceeeeEEEEEEecC
Confidence 99999999999999999999999999999999999999999999996 4688999999999999999999999999999
Q ss_pred CceEEEEeeceeccCCCceeeccCCCCCeEEEEEEEecccCCCceeEEEEEEEeeecCCCeEEEEEecccccccCHHHHH
Q psy14673 566 GMSIHTFHGNFFVRSTDLLALPNVNPDAGYGIQISIDENLTHIQYACFQVAVLYTSSKGDRRIRVHTLCLPVVSNINDVL 645 (912)
Q Consensus 566 gl~i~~~~G~~~~~~t~~~~l~~i~~~~si~~~~~~~~~l~~~~~~~iQ~allYt~~~G~rriRV~T~~l~vt~~~~~v~ 645 (912)
||+|+++|||++.+++++|+++++++|++|+|+|++++++.+...+|||||++||+.+|+|||||||++++|++++.++|
T Consensus 436 gl~v~~~~G~~~~~~t~~~~l~~~~~d~s~~v~f~~~~~l~~~~~~~~Q~allYt~~~G~RRiRV~T~~l~vt~~~~~v~ 515 (770)
T 3efo_B 436 GFRATDFFGGILMNNTTDVEMAAIDCDKAVTVEFKHDDKLSEDSGALIQCAVLYTTISGQRRLRIHNLGLNCSSQLADLY 515 (770)
T ss_dssp TEEEEEEESSCBCSSSSCEEEEEEESSCCEEEEEEESSCCBTTTBEEEEEEEEEECTTCCEEEEEEEEEEEEESCHHHHH
T ss_pred CeEEEEeECCeeCCCCCceEecccCcCceEEEEEEecCCCCCCCcEEEEEEEEEEcCCCCEEEEEEEechhhcccHHHHH
Confidence 99999999999999999999999999999999999999987777899999999999999999999999999999999999
Q ss_pred hccCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHhhcCCCC-CccccCcccChHHHHHHHHhcCccccC
Q psy14673 646 VGADQACIAGLLAKMAVDRSLQHSLSDAREAFLNVVCDVLSTYKMTQAGHLT-GSLLAPSSLKLLPLYVLALLKHPAFRI 724 (912)
Q Consensus 646 ~~~D~~a~~~llak~a~~~~~~~~~~~~r~~l~~~li~~l~~yr~~~~~~~~-~~l~lp~~l~~lP~~~~~L~ks~~l~~ 724 (912)
+++|+||++++|+|+|++++++++++++|+.|.++|++++..||++|+...+ ++|+||++||+||+|||+|+||++|+.
T Consensus 516 ~~~Dqea~~~llar~av~~~~~~~l~~~r~~L~~~~~~~l~~Yrk~~~~~~s~~ql~Lp~~lkllP~~~~~L~Ks~~l~~ 595 (770)
T 3efo_B 516 KSCETDALINFFAKSAFKAVLHQPLKVIREILVNQTAHMLACYRKNCASPSAASQLILPDSMKVLPVYMNCLLKNCVLLS 595 (770)
T ss_dssp HTBCHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHHHHHHTSCCCCTTEEEECGGGTTHHHHHHHHHHSGGGSC
T ss_pred HhcCHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHhccCCCCccceecCHHHHHHHHHHHHHhCcHhhcC
Confidence 9999999999999999999999999999999999999999999999865443 459999999999999999999999998
Q ss_pred CCCCChhHHHHHHHHHcCCChhhhHhhhcceeeecccCCCCCCccccCCcccCCccccccccccccCeEEEEeCCceEEE
Q psy14673 725 GQSTRLDDRLFAMTEMKCLPLNSLMLSIYPELYPIHTLDQDPTIEWNELQVPIPRILQLSAERLQATGTYLLNMPDLIII 804 (912)
Q Consensus 725 ~~~~s~Der~~~~~~l~~~~~~~~~~~iyP~L~~~~~~~~~~~~~~~~~~~~~P~~l~Ls~~~l~~~giyLlD~g~~i~i 804 (912)
+.++++|||+|++++++++++..++.||||+||+||++..+. ...|..++||.++|.+|||||||+|+.++|
T Consensus 596 ~~~~s~Der~~~~~~l~~~~~~~~l~~iyP~L~~~h~l~~~~--------~~~P~~v~ls~~~l~~~giyLLD~g~~i~l 667 (770)
T 3efo_B 596 RPEISTDERAYQRQLVMTMGVADSQLFFYPQLLPIHTLDVKS--------TMLPAAVRCSESRLSEEGIFLLANGLHMFL 667 (770)
T ss_dssp SSSSCHHHHHHHHHHHHHCCHHHHHHHHSCEEEECTTCCSSS--------CSCCCCCCSSGGGCCTTCEEEEECSSEEEE
T ss_pred CCCCCccHHHHHHHHHHCCCHHHHHHhhccceEEEecccccc--------ccCCCCcCCcHHHcCCCcEEEEECCcEEEE
Confidence 778999999999999999999999999999999999875441 135667899999999999999999999999
Q ss_pred EecCCCChhHHhhccCCCCcCCCCcccccCCCCchHHHHHHHHHHHHHhhcCCCcccEEEEeCCCCcHHHHHHHhcccCC
Q psy14673 805 LVRHGTSPAICSGLFGFQSVAQMPETLFELPQLETQLSLKLNSFISYLNDDKAYVSPVKVIKDSSPDRMEFYDKLIEDKN 884 (912)
Q Consensus 805 ~vg~~v~~~~~~~lfg~~~~~~~~~~~~~lp~~d~~~~~~~~~~i~~l~~~r~~~~p~~iv~~~~~~~~~f~~~lveD~~ 884 (912)
|+|+++++|++++|||++++.+++..+.+||++|++.|+++|+||+.||+.|..+++++|||++++.+.+|..+||||++
T Consensus 668 w~G~~v~~~l~~~lfgv~~~~~i~~~~~~lp~~~~~~s~~vr~ii~~lr~~r~~~~~l~ivr~~~~~e~~f~~~LvED~~ 747 (770)
T 3efo_B 668 WLGVSSPPELIQGIFNVPSFAHINTDMTLLPEVGNPYSQQLRMIMGIIQQKRPYSMKLTIVKQREQPEMVFRQFLVEDKG 747 (770)
T ss_dssp EECTTCCHHHHHHHHSSSSGGGCCTTCCSCCCCCSSHHHHHHHHHHHHHTTCSSCCEEEEEESTTSTTHHHHTTCTTSCC
T ss_pred EecCCCCHHHHHHhcCCCchhhcCcccccCCCCCCHHHHHHHHHHHHHHHhCCCCccEEEEeCCCChHHHHHHhCcccCC
Confidence 99999999999999999999999998999999999999999999999999999999999999999899999999999999
Q ss_pred -CCCCCHHHHHHHHHHHHHhhhc
Q psy14673 885 -AGGMAYYEFLLRIRDYQASVLT 906 (912)
Q Consensus 885 -~~~~Sy~~fl~~l~~~i~~~~~ 906 (912)
++.+||.|||++|||+|.++|+
T Consensus 748 ~~~~~SY~dfL~~lh~~i~~~l~ 770 (770)
T 3efo_B 748 LYGGSSYVDFLCCVHKEICQLLN 770 (770)
T ss_dssp ---CCCHHHHHHHHHHHHHHTCC
T ss_pred CCCCCCHHHHHHHHHHHHHHhcC
Confidence 7889999999999999999985
No 3
>3eh2_A Protein transport protein SEC24C; copii-coat protein, vesicle transport, cytoplasm, endoplasmic reticulum, ER-golgi transport, golgi apparatus; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.8e-132 Score=1204.26 Aligned_cols=629 Identities=27% Similarity=0.500 Sum_probs=589.8
Q ss_pred CcCccCcccccCCCCCCC----------CCCCCccccccccEEEEecccccC--CCCCCCcEEEEEEEccHhHHhhchHH
Q psy14673 267 NLPEIHEQFLYDRNTEMF----------GDPYRRPEIQSATVEYLATADYTV--RDPPQPAMYLFLLDVSQIAAQSGYLY 334 (912)
Q Consensus 267 ~~~~~p~~~~~~~~~~~~----------~d~~~rpEL~~~tvEy~~p~~y~~--r~~~~pp~~vFvID~s~~a~~~g~l~ 334 (912)
+.|.||+|+..|.++..| .|.++||||.+|+|||++|.||+. | +|.||+|+||||||.+++++|+++
T Consensus 115 ~~w~Cn~C~~~N~~P~~Y~~~l~~~g~r~d~~~rpEL~~~~vef~a~~eY~~~~~-~p~pp~y~FvIDvs~~av~sg~l~ 193 (766)
T 3eh2_A 115 RRFQCCFCSCINDVPPQYFQHLDHTGKRVDAYDRPELSLGSYEFLATVDYCKNNK-FPSPPAFIFMIDVSYNAIRTGLVR 193 (766)
T ss_dssp TEEECTTTCCEEECCTTTTGGGGGSSSCCCCSCCHHHHCSEEEEECCGGGSGGGS-CCCCCEEEEEEECSHHHHHTTHHH
T ss_pred CEEEeccccccCCCCHHHhccccccccccccccCcccccCceeeecCHhhccCCC-CCCCCEEEEEEECchhhccchHHH
Confidence 789999999888665554 478999999999999999999986 6 899999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCC-----CCceEEEEEEccEEEEEEcCCCCCCCceeeccCccccCCCCCCCcccchhHhHHHHHHH
Q psy14673 335 TVCEVLLNQLKSMPGD-----RRTSIAIITYDSAVHFYSLAEGQTQPSQMILTDIDDIFLPSPENILVNLSECYDMIVDL 409 (912)
Q Consensus 335 ~~~~si~~~L~~lp~~-----~~~~VglITfd~~V~~y~l~~~~~~~~~~vv~dl~d~f~p~~~~~lv~l~e~~~~i~~l 409 (912)
++|++|+++|+.||++ ++++|||||||++||||+|+.+.++++|+|++|++|+|+|++++||++++||++.|+++
T Consensus 194 ~~~~si~~~L~~lp~~~~~~~~~~~VG~ITfd~~vh~y~l~~~~~~~q~~vv~dl~d~f~P~~~~~lv~l~e~~~~i~~l 273 (766)
T 3eh2_A 194 LLCEELKSLLDFLPREGGAEESAIRVGFVTYNKVLHFYNVKSSLAQPQMMVVSDVADMFVPLLDGFLVNVNESRAVITSL 273 (766)
T ss_dssp HHHHHHHHHGGGCCCCSSCSSCCCEEEEEEESSSEEEEECCTTCSSCEEEEECCTTTCCCCCCTTSSBCTTTTHHHHHHH
T ss_pred HHHHHHHHHHHhCCcccccCCccceEEEEEeCCEEEEEECCCCCCCceEEEecChhhhccccccceeEeHHHHHHHHHHH
Confidence 9999999999999976 35899999999999999999888899999999999999999999999999999999999
Q ss_pred HHhCCccccCCCCCCCcHHHHHHHHHHhhcC--CCCEEEEEecCCCC-CCCCcccCCCCCCCC-CCCCCCCCCchHHHHH
Q psy14673 410 LKQLPGKFKDSLDSGSALGPALQAAFKLLQP--TGGRITIFQTCLPN-RGPGALQSRENPNQR-SNDDPPHMNPATDFYK 485 (912)
Q Consensus 410 L~~L~~~~~~~~~~~~~~G~AL~~A~~ll~~--~GGrI~~f~~g~pt-~GpG~l~~~~~~~~~-~~~~~~~~~~~~~fY~ 485 (912)
|++|+.+|.+.+.+.+|+|+||.+|+.+++. .||||++|++|+|+ .|||+|+.|+++... ++||+++++++++||+
T Consensus 274 L~~L~~~~~~~~~~~t~~g~al~aa~~~l~~~~~GGkI~~F~s~lP~t~GpG~l~~r~~~~~~~sdke~~~~~~a~~fY~ 353 (766)
T 3eh2_A 274 LDQIPEMFADTRETETVFVPVIQAGMEALKAAECAGKLFLFHTSLPIAEAPGKLKNRDDRKLINTDKEKTLFQPQTGAYQ 353 (766)
T ss_dssp HHHHHHHHTTCCCCCCCSHHHHHHHHHHHHHTTCCEEEEEEECSCCCSSSTTCCCCCCCGGGTTSTTGGGGTSCSSTHHH
T ss_pred HHhhhhhccCCCCCcchHHHHHHHHHHHhccCCCCcEEEEEecCCCCcCCCcccccccccccCCCcchhhhccchHHHHH
Confidence 9999999988888899999999999999974 79999999999776 899999999876543 5677889999999999
Q ss_pred HHHHHHhhCCcEEEEEEecCCccChhhhcccccCCCceEEecCCCCCCCchhHHHHHHHHHHhhhcccccceeEEEEecC
Q psy14673 486 KIALECTSFYIAVDLFILNSQYVDLATLSGVSKFSSGCIHHIPLYSGKNMSHVYQLDRMFSRYLTRKIGFESVMRIRCTK 565 (912)
Q Consensus 486 ~La~~~~~~~isvdlf~~s~~~~~l~~l~~l~~~TGG~v~~~~~f~~~~~~~~~~~~~~l~~~l~~~~g~~a~l~vr~S~ 565 (912)
+||.+|+++||+||||+++.+++|++||+.|++.|||.+++|++|+. ..+.++|.++|.+.+++++||+|+||||||+
T Consensus 354 ~la~~~~~~~i~VDlF~~s~~~vdlatl~~l~~~TGG~v~~y~~F~~--~~d~~~f~~dl~~~l~~~~gf~a~mrVR~S~ 431 (766)
T 3eh2_A 354 TLAKECVAQGCCVDLFLFPNQYVDVATLSVVPQLTGGSVYKYASFQV--ENDQERFLSDLRRDVQKVVGFDAVMRVRTST 431 (766)
T ss_dssp HHHHHHHHHTEEEEEEECCSSCCCHHHHTHHHHHTTCCEEECTTCCH--HHHHHHHHHHHHHHHHSCEEEEEEEEEEECT
T ss_pred HHHHHHHhCCeEEEEEEecCCCcChHHHHHHHhhcCceEEEeCCCcc--hhHHHHHHHHHHHHhhhcceeeEEEEEEecC
Confidence 99999999999999999999999999999999999999999999996 4678999999999999999999999999999
Q ss_pred CceEEEEeeceeccCCCceeeccCCCCCeEEEEEEEecccCCCceeEEEEEEEeeecCCCeEEEEEecccccccCHHHHH
Q psy14673 566 GMSIHTFHGNFFVRSTDLLALPNVNPDAGYGIQISIDENLTHIQYACFQVAVLYTSSKGDRRIRVHTLCLPVVSNINDVL 645 (912)
Q Consensus 566 gl~i~~~~G~~~~~~t~~~~l~~i~~~~si~~~~~~~~~l~~~~~~~iQ~allYt~~~G~rriRV~T~~l~vt~~~~~v~ 645 (912)
||+|+++|||++.+++++|+++++++|++|+|+|++++++.+...+|||||++||+.+|+|||||||++++|++++.++|
T Consensus 432 glkv~~~~G~~~~~~t~~~~l~~i~~d~s~~v~f~~~~~l~~~~~~~~Q~allYt~~~G~RRiRV~T~~l~vt~~~~~v~ 511 (766)
T 3eh2_A 432 GIRAVDFFGAFYMSNTTDVELAGLDGDKTVTVEFKHDDRLNEESGALLQCALLYTSCAGQRRLRIHNLALNCCTQLADLY 511 (766)
T ss_dssp TEEEEEEEESCBCSSSSCEEEEEEETTCCEEEEEEESSCCCTTTCEEEEEEEEEECTTSCEEEEEEEEEEEEESSHHHHH
T ss_pred CeEEEEeECCeecCCCCceeeccCCCCceEEEEEEecCCCCCCCcEEEEEEEEeEcCCCCEEEEEEEEeeEecCCHHHHH
Confidence 99999999999999999999999999999999999999987778999999999999999999999999999999999999
Q ss_pred hccCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHhhcCCCC-CccccCcccChHHHHHHHHhcCccccC
Q psy14673 646 VGADQACIAGLLAKMAVDRSLQHSLSDAREAFLNVVCDVLSTYKMTQAGHLT-GSLLAPSSLKLLPLYVLALLKHPAFRI 724 (912)
Q Consensus 646 ~~~D~~a~~~llak~a~~~~~~~~~~~~r~~l~~~li~~l~~yr~~~~~~~~-~~l~lp~~l~~lP~~~~~L~ks~~l~~ 724 (912)
+++|+||++++|+|+|+++++++++.++|+.|.++|+++++.||++|+...+ ++|+||++||+||+|||+|+||++|+.
T Consensus 512 ~~~Dqea~~~llar~av~~~~~~~~~~~R~~l~~~~~~~l~~Yrk~~~~~~s~~ql~lp~~lkllP~~~~~L~Ks~~l~~ 591 (766)
T 3eh2_A 512 RNCETDTLINYMAKFAYRGVLNSPVKAVRDTLITQCAQILACYRKNCASPSSAGQLILPECMKLLPVYLNCVLKSDVLQP 591 (766)
T ss_dssp HTBCHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHHHHHHC------CCCCCCGGGTTHHHHHHHHHTSTTTSC
T ss_pred HhcCHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHhhccCCCCccceecCHHHHHHHHHHHHHHccHhhcC
Confidence 9999999999999999999999999999999999999999999999864433 359999999999999999999999998
Q ss_pred CCCCChhHHHHHHHHHcCCChhhhHhhhcceeeecccCCCCCCccccCCcccCCccccccccccccCeEEEEeCCceEEE
Q psy14673 725 GQSTRLDDRLFAMTEMKCLPLNSLMLSIYPELYPIHTLDQDPTIEWNELQVPIPRILQLSAERLQATGTYLLNMPDLIII 804 (912)
Q Consensus 725 ~~~~s~Der~~~~~~l~~~~~~~~~~~iyP~L~~~~~~~~~~~~~~~~~~~~~P~~l~Ls~~~l~~~giyLlD~g~~i~i 804 (912)
+.++++|||+|++++++++++..++.||||+||++|++..+. ...|+.++||.++|.+|||||||+|+.|+|
T Consensus 592 ~~~~s~Der~~~~~~l~~~~~~~~l~~iyP~L~~~h~~~~~~--------~~~P~~v~ls~~~l~~~giyLlD~g~~i~l 663 (766)
T 3eh2_A 592 GAEVTTDDRAYVRQLVTSMDVTETNVFFYPRLLPLTKSPVES--------TTEPPAVRASEERLSNGDIYLLENGLNLFL 663 (766)
T ss_dssp CTTCCHHHHHHHHHHHHHCCHHHHHHHHSCEEEECSSCCCSC--------C--CCCBCSSGGGCCTTCEEEEECSSEEEE
T ss_pred CCCCCccHHHHHHHHHHCCCHHHHHHHHhheEEEeecCCccc--------ccCCCCcCCcHHHcCCCcEEEEEcCcEEEE
Confidence 778999999999999999999999999999999999875441 235667899999999999999999999999
Q ss_pred EecCCCChhHHhhccCCCCcCCCCcccccCCCCchHHHHHHHHHHHHHhhcCCCcccEEEEeCCCCcHHHHHHHhcccCC
Q psy14673 805 LVRHGTSPAICSGLFGFQSVAQMPETLFELPQLETQLSLKLNSFISYLNDDKAYVSPVKVIKDSSPDRMEFYDKLIEDKN 884 (912)
Q Consensus 805 ~vg~~v~~~~~~~lfg~~~~~~~~~~~~~lp~~d~~~~~~~~~~i~~l~~~r~~~~p~~iv~~~~~~~~~f~~~lveD~~ 884 (912)
|+|++++++++++|||++++.+++..+.+||++|++.|+++|+||+.||+.|..+++++|||++++.+.+|..+||||++
T Consensus 664 w~G~~v~~~~l~dlFgv~~~~~i~~~~~~lp~~~~~~s~~vr~ii~~lr~~~~~~~~l~ivr~~~~~~~~f~~~LvED~~ 743 (766)
T 3eh2_A 664 WVGASVQQGVVQSLFSVSSFSQITSGLSVLPVLDNPLSKKVRGLIDSLRAQRSRYMKLTVVKQEDKMEMLFKHFLVEDKS 743 (766)
T ss_dssp EECTTCCHHHHHHHHSCSSGGGSCTTCCSCCCCSSHHHHHHHHHHHHHHTTSSSCCEEEEEESSSSTHHHHHTTCTTSCC
T ss_pred EecCCCCHHHHHHHcCCCchhhcCcccccCCCCCCHHHHHHHHHHHHHHHhCCCCceEEEEeCCCChHHHHHHhCcccCC
Confidence 99999999999999999999999988899999999999999999999999998999999999998899999999999998
Q ss_pred CC-CCCHHHHHHHHHHHHHhhhc
Q psy14673 885 AG-GMAYYEFLLRIRDYQASVLT 906 (912)
Q Consensus 885 ~~-~~Sy~~fl~~l~~~i~~~~~ 906 (912)
.+ .+||.|||++|||+|.++|+
T Consensus 744 ~~~~~SY~dfL~~lh~~i~~~l~ 766 (766)
T 3eh2_A 744 LSGGASYVDFLCHMHKEIRQLLS 766 (766)
T ss_dssp TTTCCCHHHHHHHHHHHHHHHCC
T ss_pred CCCCCCHHHHHHHHHHHHHHhcC
Confidence 75 89999999999999999885
No 4
>1m2v_B SEC24, protein transport protein SEC24, SEC24P, SEC24 protein, abnormal nuclear; zinc-finger, beta barrel, VWA domain, gelsolin domain,; 2.75A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1
Probab=100.00 E-value=1.8e-130 Score=1197.56 Aligned_cols=633 Identities=31% Similarity=0.544 Sum_probs=557.5
Q ss_pred CcCccCcccccCCCCCCC--------CCCCCccccccccEEEEecccccCCCCCCCcEEEEEEEccHhHHhhchHHHHHH
Q psy14673 267 NLPEIHEQFLYDRNTEMF--------GDPYRRPEIQSATVEYLATADYTVRDPPQPAMYLFLLDVSQIAAQSGYLYTVCE 338 (912)
Q Consensus 267 ~~~~~p~~~~~~~~~~~~--------~d~~~rpEL~~~tvEy~~p~~y~~r~~~~pp~~vFvID~s~~a~~~g~l~~~~~ 338 (912)
+.|.|++|+..|.++..| .|...||||+++||||++|++|+.| ++.||+||||||+|..++++|+++++|+
T Consensus 249 ~~W~CnfC~~~N~~P~~Y~~~~~~~~~d~~~RpEL~~~tvEyi~p~ey~~r-~p~ppvyvFvIDvS~~av~~g~l~~l~~ 327 (926)
T 1m2v_B 249 RRWRCNFCRLANDVPMQMDQSDPNDPKSRYDRNEIKCAVMEYMAPKEYTLR-QPPPATYCFLIDVSQSSIKSGLLATTIN 327 (926)
T ss_dssp TEEECTTTCCEEECCGGGTTTSTTCGGGGGGSHHHHCSEEEEECCGGGCSS-CCCCCBEEEEEECSHHHHHSCHHHHHHH
T ss_pred CEEEccCCCCCCCCchhhccccccCccccccCccccCceEEEEcChhhccC-CCCCcEEEEEEECCHHHHhhhHHHHHHH
Confidence 789999999888665544 3677889999999999999999998 8999999999999999999999999999
Q ss_pred HHHHHHhcCCCC-CCceEEEEEEccEEEEEEcCCCCC-------CCceeeccCccccCCCCCCCcccchhHhHHHHHHHH
Q psy14673 339 VLLNQLKSMPGD-RRTSIAIITYDSAVHFYSLAEGQT-------QPSQMILTDIDDIFLPSPENILVNLSECYDMIVDLL 410 (912)
Q Consensus 339 si~~~L~~lp~~-~~~~VglITfd~~V~~y~l~~~~~-------~~~~~vv~dl~d~f~p~~~~~lv~l~e~~~~i~~lL 410 (912)
+|+++|+.||++ ++++|||||||+.||||+++.+.. +++|++++|++|+|+|.+++||++++||++.|+++|
T Consensus 328 sI~~~L~~LP~~~~~~~VGlITFds~Vh~y~l~~~~~g~k~~~~q~qmlvvsdl~d~f~P~~~~~Lv~l~e~~~~I~~lL 407 (926)
T 1m2v_B 328 TLLQNLDSIPNHDERTRISILCVDNAIHYFKIPLDSENNEESADQINMMDIADLEEPFLPRPNSMVVSLKACRQNIETLL 407 (926)
T ss_dssp HHHHTTTTSCCTTSCCEECEEEESSSEEEEECCCC---------CCEEEEECCCSSCCCSCSSSSSEETTTTHHHHHHHH
T ss_pred HHHHHHHhCCCCCCCcEEEEEEECCEEEEEecCCcccCCcccccchhhccccccccccCCCcccccccHHHHHHHHHHHH
Confidence 999999999974 578999999999999999998654 689999999999999999999999999999999999
Q ss_pred HhCCccccCCCCCCCcHHHHHHHHHHhhcCCCCEEEEEecCCCCCCCCcccCCCCCCCC-CCCCCC-CCCchHHHHHHHH
Q psy14673 411 KQLPGKFKDSLDSGSALGPALQAAFKLLQPTGGRITIFQTCLPNRGPGALQSRENPNQR-SNDDPP-HMNPATDFYKKIA 488 (912)
Q Consensus 411 ~~L~~~~~~~~~~~~~~G~AL~~A~~ll~~~GGrI~~f~~g~pt~GpG~l~~~~~~~~~-~~~~~~-~~~~~~~fY~~La 488 (912)
++|+.+|..++++.||+|+||++|..+|+..||||++|++|+||.|||+|+.|++.+.. ..||+. +++++.+||++||
T Consensus 408 e~L~~~~~~~~~~~~~~G~AL~aA~~lL~~~GGrI~~F~sg~Pt~GpG~l~~re~~~~~~~~ke~~~ll~~a~~FYk~LA 487 (926)
T 1m2v_B 408 TKIPQIFQSNLITNFALGPALKSAYHLIGGVGGKIIVVSGTLPNLGIGKLQRRNESGVVNTSKETAQLLSCQDSFYKNFT 487 (926)
T ss_dssp HHHHHHTSSCCCCCCCHHHHHHHHHHHHTTTCEEEEEEESSCCCSSTTCCCCCCC----CCTTHHHHHTSCSSTHHHHHH
T ss_pred HhhhhhhcCCCCCCccHHHHHHHHHHHHHhhCCEEEEEecCCCCCCCCcccccccccccCcccchhhhccchHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999876543 224544 8999999999999
Q ss_pred HHHhhCCcEEEEEEecCCccChhhhcccccCCCceEEecCCCCCCCchhHHHHHHHHHHhhhcccccceeEEEEecCCce
Q psy14673 489 LECTSFYIAVDLFILNSQYVDLATLSGVSKFSSGCIHHIPLYSGKNMSHVYQLDRMFSRYLTRKIGFESVMRIRCTKGMS 568 (912)
Q Consensus 489 ~~~~~~~isvdlf~~s~~~~~l~~l~~l~~~TGG~v~~~~~f~~~~~~~~~~~~~~l~~~l~~~~g~~a~l~vr~S~gl~ 568 (912)
.+|+++||+||||+++.+++|+++|+.|++.|||.+++|++|+.....+..+|.+|+.+.|++++||+|+||||||+||+
T Consensus 488 ~~~~~~gisVDlF~~s~~~vdla~l~~l~~~TGG~v~~y~~F~~~~~~d~~kf~~dl~~~Lt~~~gf~a~mrVR~S~glk 567 (926)
T 1m2v_B 488 IDCSKVQITVDLFLASEDYMDVASLSNLSRFTAGQTHFYPGFSGKNPNDIVKFSTEFAKHISMDFCMETVMRARGSTGLR 567 (926)
T ss_dssp HHHHHHTEEEEEEEEESSCCCHHHHHHHHHTTTCCEEEEESCCTTSHHHHHHHHHHHHHHHHSCCEEEEEEEEEECTTEE
T ss_pred HHHHHcCeEEEEEEccCCCcChHHHHHHHhcCCceEEEcCCCcchhhhHHHHHHHHHHHHhhhhhceeEEEEEEeCCCcE
Confidence 99999999999999999999999999999999999999999997544577889999999999999999999999999999
Q ss_pred EEEEeeceeccCCCceeeccCCCCCeEEEEEEEecccCCCceeEEEEEEEeeecCCCeEEEEEecccccccCHHHHHhcc
Q psy14673 569 IHTFHGNFFVRSTDLLALPNVNPDAGYGIQISIDENLTHIQYACFQVAVLYTSSKGDRRIRVHTLCLPVVSNINDVLVGA 648 (912)
Q Consensus 569 i~~~~G~~~~~~t~~~~l~~i~~~~si~~~~~~~~~l~~~~~~~iQ~allYt~~~G~rriRV~T~~l~vt~~~~~v~~~~ 648 (912)
|++++|||+.+++++|+++++++|++|+|+|++++++. .+.+|||||++||+.+|+|||||||++++|++++.++|+++
T Consensus 568 v~~~~G~~~~~~s~~~~l~~l~~d~s~av~f~~~~~l~-~~~~~~Q~allYT~~~G~RRiRV~T~~l~vt~~l~~v~~s~ 646 (926)
T 1m2v_B 568 MSRFYGHFFNRSSDLCAFSTMPRDQSYLFEVNVDESIM-ADYCYVQVAVLLSLNNSQRRIRIITLAMPTTESLAEVYASA 646 (926)
T ss_dssp EEEEESSSBCSSTTEEEEEEECSSCCEEEEEEECSBCC-SSEEEEEEEEEEEETTTEEEEEEEEEEEEEESCHHHHHHTB
T ss_pred EEEeecCccccCcCceEeeccCCCCEEEEEEEeccCCC-CCcEEEEEEEEEEcCCCCEEEEEEeecccccCCHHHHHHhc
Confidence 99999999999999999999999999999999999886 57899999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHhhcCCCCC---ccccCcccChHHHHHHHHhcCccccCC
Q psy14673 649 DQACIAGLLAKMAVDRSLQHSLSDAREAFLNVVCDVLSTYKMTQAGHLTG---SLLAPSSLKLLPLYVLALLKHPAFRIG 725 (912)
Q Consensus 649 D~~a~~~llak~a~~~~~~~~~~~~r~~l~~~li~~l~~yr~~~~~~~~~---~l~lp~~l~~lP~~~~~L~ks~~l~~~ 725 (912)
|+||++++|+|+|+++++++++.|+|+||+++|+++|+.||+.|...... +|+||++||+||+|||+|+||++|+ +
T Consensus 647 Dqea~~~llar~av~~~~~~~~~d~r~~L~~~li~il~~Yrk~~~~~~~~~~~sl~Lp~~lkllP~~~~~L~KS~~l~-~ 725 (926)
T 1m2v_B 647 DQLAIASFYNSKAVEKALNSSLDDARVLINKSVQDILATYKKEIVVSNTAGGAPLRLCANLRMFPLLMHSLTKHMAFR-S 725 (926)
T ss_dssp CHHHHHHHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHTCCCTTSSSSCCEEEGGGTTHHHHHHHHHTSTTTC-S
T ss_pred CHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhhhcccccCCCCcccccCHHHHHHHHHHHHHhcchhhC-C
Confidence 99999999999999999999999999999999999999999998764432 4999999999999999999999999 5
Q ss_pred CCCChhHHHHHHHHHcCCChhhhHhhhcceeeecccCCCCCCcc------ccCCcccCCccccccccccccCeEEEEeCC
Q psy14673 726 QSTRLDDRLFAMTEMKCLPLNSLMLSIYPELYPIHTLDQDPTIE------WNELQVPIPRILQLSAERLQATGTYLLNMP 799 (912)
Q Consensus 726 ~~~s~Der~~~~~~l~~~~~~~~~~~iyP~L~~~~~~~~~~~~~------~~~~~~~~P~~l~Ls~~~l~~~giyLlD~g 799 (912)
.+++.|||+|++++++++++..++.||||+||+||++.++.+.. .+.+++.+|+.++||.+.|+++|+||||+|
T Consensus 726 ~~~p~Dera~~~~~l~~~~~~~l~~~iyP~L~s~h~~~~~~g~~~~~~~~~~~~~~~~P~~l~Ls~~~l~~~g~yLld~G 805 (926)
T 1m2v_B 726 GIVPSDHRASALNNLESLPLKYLIKNIYPDVYSLHDMADEAGLPVQTEDGEATGTIVLPQPINATSSLFERYGLYLIDNG 805 (926)
T ss_dssp SCCCHHHHHHHHHHHHHSCHHHHHHHHSCEEEETTTCCSSCSCC---------CCCCCCCCBCSCSTTCCTTCEEEEECS
T ss_pred CCCCccHHHHHHHHHHcCCHHHHHHhccCeEEEeccCcccccccccccccccccccccCCcccCcHHHhccCCEEEEECC
Confidence 35555999999999999999999999999999999886665432 344567889999999999999999999999
Q ss_pred ceEEEEecCCCChhHHhhccCCCCcCCCCcccccCCCC-chHHHHHHHHHHHHHhhcCC--CcccEEEEeCCCC------
Q psy14673 800 DLIIILVRHGTSPAICSGLFGFQSVAQMPETLFELPQL-ETQLSLKLNSFISYLNDDKA--YVSPVKVIKDSSP------ 870 (912)
Q Consensus 800 ~~i~i~vg~~v~~~~~~~lfg~~~~~~~~~~~~~lp~~-d~~~~~~~~~~i~~l~~~r~--~~~p~~iv~~~~~------ 870 (912)
..|++|+|+.++++++++|||++++.+++....+||++ |++.+++||+||+.||+.|. ++++++|||+++.
T Consensus 806 ~~i~lWvG~~~~p~ll~dlFg~~~~~~i~~~~~~lp~l~~~~~s~~lr~iI~~lr~~r~~~~~~~l~ivr~~~~~~~~~~ 885 (926)
T 1m2v_B 806 NELFLWMGGDAVPALVFDVFGTQDIFDIPIGKQEIPVVENSEFNQRVRNIINQLRNHDDVITYQSLYIVRGASLSEPVNH 885 (926)
T ss_dssp SEEEEEECTTCCSGGGC-------------------------CHHHHHHHHHHTTCCSSCCCCCEEEEEC----------
T ss_pred CEEEEEecCCCCHHHHHHHhCCCchhhcCcccccCccCCCChHHHHHHHHHHHHHHhCCCCCCceEEEEecCCCCCcccc
Confidence 99999999999999999999999999999888999999 99999999999999999875 5678999986433
Q ss_pred --------cHHHHHHHhcccCCCCCCCHHHHHHHHHHHHH
Q psy14673 871 --------DRMEFYDKLIEDKNAGGMAYYEFLLRIRDYQA 902 (912)
Q Consensus 871 --------~~~~f~~~lveD~~~~~~Sy~~fl~~l~~~i~ 902 (912)
.+.+|+++||||++++.+||.|||++|||+|.
T Consensus 886 ~~~~~~~~~~~~f~~~LvED~~~~~~SY~dfL~~lh~~i~ 925 (926)
T 1m2v_B 886 ASAREVATLRLWASSTLVEDKILNNESYREFLQIMKARIS 925 (926)
T ss_dssp --CCHHHHHHHHHHHTCTTSSCTTCCCHHHHHHHHHHHHC
T ss_pred ccccchhhHHHHHHHhCeecCCCCCCCHHHHHHHHHHHhh
Confidence 34578999999999999999999999999985
No 5
>1pcx_A Protein transport protein SEC24; 2.50A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 PDB: 1pd0_A 1pd1_A
Probab=100.00 E-value=1.4e-128 Score=1178.36 Aligned_cols=633 Identities=31% Similarity=0.544 Sum_probs=566.3
Q ss_pred CcCccCcccccCCCCCCC--------CCCCCccccccccEEEEecccccCCCCCCCcEEEEEEEccHhHHhhchHHHHHH
Q psy14673 267 NLPEIHEQFLYDRNTEMF--------GDPYRRPEIQSATVEYLATADYTVRDPPQPAMYLFLLDVSQIAAQSGYLYTVCE 338 (912)
Q Consensus 267 ~~~~~p~~~~~~~~~~~~--------~d~~~rpEL~~~tvEy~~p~~y~~r~~~~pp~~vFvID~s~~a~~~g~l~~~~~ 338 (912)
+.|.|++|+..|.++..| .|...||||+++||||++|++|+.| ++.||+||||||+|..++++|+++++|+
T Consensus 133 ~~W~C~~C~~~N~~P~~y~~~~~~~~~d~~~RpEL~~~tvEy~~p~~y~~~-~p~pp~yvFvIDvs~~av~~g~l~~~~~ 211 (810)
T 1pcx_A 133 RRWRCNFCRLANDVPMQMDQSDPNDPKSRYDRNEIKCAVMEYMAPKEYTLR-QPPPATYCFLIDVSQSSIKSGLLATTIN 211 (810)
T ss_dssp TEEECTTTCCEEECCGGGGC-----CCCGGGSHHHHCSEEEEECCGGGCSS-CCCCCEEEEEEECSHHHHHHTHHHHHHH
T ss_pred CEEEccCCCCcCCCchhhccccccCccccccCccccCceEEEEcCchhccC-CCCCcEEEEEEECChHHHhhhHHHHHHH
Confidence 789999999888665443 4788899999999999999999998 8999999999999999999999999999
Q ss_pred HHHHHHhcCCCC-CCceEEEEEEccEEEEEEcCCCCC-------CCceeeccCccccCCCCCCCcccchhHhHHHHHHHH
Q psy14673 339 VLLNQLKSMPGD-RRTSIAIITYDSAVHFYSLAEGQT-------QPSQMILTDIDDIFLPSPENILVNLSECYDMIVDLL 410 (912)
Q Consensus 339 si~~~L~~lp~~-~~~~VglITfd~~V~~y~l~~~~~-------~~~~~vv~dl~d~f~p~~~~~lv~l~e~~~~i~~lL 410 (912)
+|+++|+.||++ ++++|||||||+.||||+++.+.. +++|++++|++|+|+|.+++||++++||++.|+++|
T Consensus 212 si~~~L~~Lp~~~~~~~VGlITfd~~V~~~~l~~~~~g~k~~~~q~~mlvv~dl~d~f~P~~~~~Lv~l~e~~~~i~~lL 291 (810)
T 1pcx_A 212 TLLQNLDSIPNHDERTRISILCVDNAIHYFKIPLDSENNEESADQINMMDIADLEEPFLPRPNSMVVSLKACRQNIETLL 291 (810)
T ss_dssp HHHHHTTTSCCTTSCCEEEEEEESSSEEEEECCCGGGC-------CEEECCCCTTCC-----TTTSEETTTTHHHHHHHH
T ss_pred HHHHHHHhCCCCCCCcEEEEEEECCEEEEEecCccccCccccccchhhccccccccccCCCcccccccHHHHHHHHHHHH
Confidence 999999999974 578999999999999999987554 689999999999999999999999999999999999
Q ss_pred HhCCccccCCCCCCCcHHHHHHHHHHhhcCCCCEEEEEecCCCCCCCCcccCCCCCCCC-CCCCCC-CCCchHHHHHHHH
Q psy14673 411 KQLPGKFKDSLDSGSALGPALQAAFKLLQPTGGRITIFQTCLPNRGPGALQSRENPNQR-SNDDPP-HMNPATDFYKKIA 488 (912)
Q Consensus 411 ~~L~~~~~~~~~~~~~~G~AL~~A~~ll~~~GGrI~~f~~g~pt~GpG~l~~~~~~~~~-~~~~~~-~~~~~~~fY~~La 488 (912)
++|+.+|..++++.||+|+||++|..+|+..||||++|++|+||.|||+|+.|++++.. ..||+. +++++.+||++||
T Consensus 292 ~~L~~~~~~~~~~~~a~G~AL~~A~~lL~~~GGrI~~F~sg~pt~GpG~l~~r~~~~~~~~~ke~~~l~~~a~~fY~~la 371 (810)
T 1pcx_A 292 TKIPQIFQSNLITNFALGPALKSAYHLIGGVGGKIIVVSGTLPNLGIGKLQRRNESGVVNTSKETAQLLSCQDSFYKNFT 371 (810)
T ss_dssp HHHHHHTTTCCCCCCCHHHHHHHHHHHHTTTCEEEEEEESSCCCSSTTCCCC--------------------CCHHHHHH
T ss_pred HhhhhhccCCCCCCccHHHHHHHHHHHHHhcCCEEEEEecCCCCCCCCcccccccccccCcccchhhhcccchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999876543 235554 9999999999999
Q ss_pred HHHhhCCcEEEEEEecCCccChhhhcccccCCCceEEecCCCCCCCchhHHHHHHHHHHhhhcccccceeEEEEecCCce
Q psy14673 489 LECTSFYIAVDLFILNSQYVDLATLSGVSKFSSGCIHHIPLYSGKNMSHVYQLDRMFSRYLTRKIGFESVMRIRCTKGMS 568 (912)
Q Consensus 489 ~~~~~~~isvdlf~~s~~~~~l~~l~~l~~~TGG~v~~~~~f~~~~~~~~~~~~~~l~~~l~~~~g~~a~l~vr~S~gl~ 568 (912)
.+|+++||+||||+++.+++|+++|+.|++.|||.+++|++|+.....+..+|.+|+.+.+++++||+|+||||||+||+
T Consensus 372 ~~~~~~gi~VDlF~~s~~~~dla~l~~l~~~TGG~v~~y~~F~~~~~~d~~~f~~dl~~~l~~~~gf~a~mrVR~S~gl~ 451 (810)
T 1pcx_A 372 IDCSKVQITVDLFLASEDYMDVASLSNLSRFTAGQTHFYPGFSGKNPNDIVKFSTEFAKHISMDFCMETVMRARGSTGLR 451 (810)
T ss_dssp HHHHHTTEEEEEEEEESSCCCHHHHHHHHHTTTCCEEEEETCCTTSHHHHHHHHHHHHHHHHCCCCEEEEEEEEECTTEE
T ss_pred HHHHHCCeEEEEEEccCCccChHHHHHHHhcCCcEEEEcCCCcchhhHHHHHHHHHHHHHhhhhcceeEEEEEEcCCCeE
Confidence 99999999999999999999999999999999999999999997544577889999999999999999999999999999
Q ss_pred EEEEeeceeccCCCceeeccCCCCCeEEEEEEEecccCCCceeEEEEEEEeeecCCCeEEEEEecccccccCHHHHHhcc
Q psy14673 569 IHTFHGNFFVRSTDLLALPNVNPDAGYGIQISIDENLTHIQYACFQVAVLYTSSKGDRRIRVHTLCLPVVSNINDVLVGA 648 (912)
Q Consensus 569 i~~~~G~~~~~~t~~~~l~~i~~~~si~~~~~~~~~l~~~~~~~iQ~allYt~~~G~rriRV~T~~l~vt~~~~~v~~~~ 648 (912)
|++++|||+.+++++|+++++++|++|+|+|++++++. .+.+|||||++||+.+|+|||||||++++|++++.++|+++
T Consensus 452 v~~~~G~~~~~~~~~~~l~~~~~d~s~~v~f~~~~~l~-~~~~~~Q~allYt~~~G~RRiRV~T~~~~vt~~~~~v~~~~ 530 (810)
T 1pcx_A 452 MSRFYGHFFNRSSDLCAFSTMPRDQSYLFEVNVDESIM-ADYCYVQVAVLLSLNNSQRRIRIITLAMPTTESLAEVYASA 530 (810)
T ss_dssp EEEEESSSBCSSSSEEEESSCCSSCCEEEEEEECSCCC-SSEEEEEEEEEEECTTSCEEEEEEEEEEEEESCHHHHHHTB
T ss_pred EEEeecCccccCcCceEeecCCCCCEEEEEEEeccCCC-CCcEEEEEEEEEEcCCCCEEEEEEecCccccCCHHHHHHhc
Confidence 99999999999999999999999999999999999886 57899999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHhhcCCCCC---ccccCcccChHHHHHHHHhcCccccCC
Q psy14673 649 DQACIAGLLAKMAVDRSLQHSLSDAREAFLNVVCDVLSTYKMTQAGHLTG---SLLAPSSLKLLPLYVLALLKHPAFRIG 725 (912)
Q Consensus 649 D~~a~~~llak~a~~~~~~~~~~~~r~~l~~~li~~l~~yr~~~~~~~~~---~l~lp~~l~~lP~~~~~L~ks~~l~~~ 725 (912)
|+||++++|||+|+++++++++.|+|+||+++|+++++.||+.|...... +|+||++||+||+|||+|+||++|+ +
T Consensus 531 Dqea~~~llar~av~~~~~~~~~d~r~~l~~~li~il~~Yrk~~~~~~~~~~~~l~lp~~lkllP~~~~~L~ks~~l~-~ 609 (810)
T 1pcx_A 531 DQLAIASFYNSKAVEKALNSSLDDARVLINKSVQDILATYKKEIVVSNTAGGAPLRLCANLRMFPLLMHSLTKHMAFR-S 609 (810)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHCC----CCSSCCEEEGGGTTHHHHHHHHHTSTTTC-S
T ss_pred CHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhhhcccccCCCCcccccCHHHHHHHHHHHHHhcchhcC-C
Confidence 99999999999999999999999999999999999999999998754332 4999999999999999999999999 5
Q ss_pred CCCChhHHHHHHHHHcCCChhhhHhhhcceeeecccCCCCCCcc------ccCCcccCCccccccccccccCeEEEEeCC
Q psy14673 726 QSTRLDDRLFAMTEMKCLPLNSLMLSIYPELYPIHTLDQDPTIE------WNELQVPIPRILQLSAERLQATGTYLLNMP 799 (912)
Q Consensus 726 ~~~s~Der~~~~~~l~~~~~~~~~~~iyP~L~~~~~~~~~~~~~------~~~~~~~~P~~l~Ls~~~l~~~giyLlD~g 799 (912)
.+++.|||+|++++++++++..++.||||+||+||++.++.|.. .+++++.+|+.++||.+.|+++|+||||+|
T Consensus 610 ~~~p~Der~~~~~~l~~~~~~~~~~~iyP~L~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~l~Ls~~~l~~~g~yLld~G 689 (810)
T 1pcx_A 610 GIVPSDHRASALNNLESLPLKYLIKNIYPDVYSLHDMADEAGLPVQTEDGEATGTIVLPQPINATSSLFERYGLYLIDNG 689 (810)
T ss_dssp SCCCHHHHHHHHHHHHHSCHHHHHHHHSCEEEECTTCCSSTTSBC--------CCBCCCCBCCSSTTSCCTTCEEEEECS
T ss_pred CCCCccHHHHHHHHHHcCCHHHHHHhccCEEEEeccCcccccccccccccccccccccCCcccCCHHHhCcCCEEEEECC
Confidence 34555999999999999999999999999999999886665432 344567889999999999999999999999
Q ss_pred ceEEEEecCCCChhHHhhccCCCCcCCCCcccccCCCC-chHHHHHHHHHHHHHhhcCC--CcccEEEEeCCCC------
Q psy14673 800 DLIIILVRHGTSPAICSGLFGFQSVAQMPETLFELPQL-ETQLSLKLNSFISYLNDDKA--YVSPVKVIKDSSP------ 870 (912)
Q Consensus 800 ~~i~i~vg~~v~~~~~~~lfg~~~~~~~~~~~~~lp~~-d~~~~~~~~~~i~~l~~~r~--~~~p~~iv~~~~~------ 870 (912)
..+++|+|++++++++++|||++++.+++....+||++ |++.++++|+||+.||+.|. ++++++|||+++.
T Consensus 690 ~~i~lwvg~~~~~~l~~~lFg~~~~~~~~~~~~~lp~~~~~~~~~~l~~iI~~lr~~r~~~~~~~l~ivr~~~~~~~~~~ 769 (810)
T 1pcx_A 690 NELFLWMGGDAVPALVFDVFGTQDIFDIPIGKQEIPVVENSEFNQRVRNIINQLRNHDDVITYQSLYIVRGASLSEPVNH 769 (810)
T ss_dssp SEEEEEECTTCCHHHHHHHHSCSCGGGSCCEECCCCCCSSCHHHHHHHHHHHHHHCCSSCCCCCEEEEEECCCTTCCCCH
T ss_pred CEEEEEeCCCCCHHHHHHHhCCCchhhcCcccccCCcCCCChHHHHHHHHHHHHHHhCCCCCCceEEEEecCCCCCcccc
Confidence 99999999999999999999999999999988999999 99999999999999999875 5678999986543
Q ss_pred --------cHHHHHHHhcccCCCCCCCHHHHHHHHHHHHH
Q psy14673 871 --------DRMEFYDKLIEDKNAGGMAYYEFLLRIRDYQA 902 (912)
Q Consensus 871 --------~~~~f~~~lveD~~~~~~Sy~~fl~~l~~~i~ 902 (912)
.+.+|+.+||||++++.+||.|||++||++|.
T Consensus 770 ~~~~~~~~~~~~f~~~LvED~~~~~~SY~~fL~~lh~~i~ 809 (810)
T 1pcx_A 770 ASAREVATLRLWASSTLVEDKILNNESYREFLQIMKARIS 809 (810)
T ss_dssp HHHHHHHHHHHHHHTTCTTSCBTTBCCHHHHHHHHHHHTC
T ss_pred ccccchhhHHHHHHHhCeecCCCCCCCHHHHHHHHHHHhh
Confidence 35689999999999999999999999999985
No 6
>1m2o_A SEC23, protein transport protein SEC23, SEC23P; zinc-finger, beta barrel, VWA domain, gelsolin domain,; HET: GNP; 2.50A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 PDB: 1m2v_A 2qtv_A*
Probab=100.00 E-value=3.2e-114 Score=1049.83 Aligned_cols=615 Identities=18% Similarity=0.240 Sum_probs=529.9
Q ss_pred ccccCCCCCCCcCCCCCCCCC--C--------------CcCccCcccccCCCCCCCC---CCCCccccccccEEEEeccc
Q psy14673 245 LLNTRDILPATKVEPPPIRLP--Q--------------NLPEIHEQFLYDRNTEMFG---DPYRRPEIQSATVEYLATAD 305 (912)
Q Consensus 245 pl~~r~~lP~~~~~P~~~~~~--~--------------~~~~~p~~~~~~~~~~~~~---d~~~rpEL~~~tvEy~~p~~ 305 (912)
|+.+...+|.+.+.|+ +|.+ . +.|.|++|+..|.++..|. +.+.||||+++||||++|.
T Consensus 39 P~~~~~~~p~v~~~pv-RC~~~~CrayiNPf~~~~~~~~~W~C~~C~~~N~~P~~y~~~~~~~~~pEL~~~tvEy~~p~- 116 (768)
T 1m2o_A 39 PLKEYDELNVAPYNPV-VCSGPHCKSILNPYCVIDPRNSSWSCPICNSRNHLPPQYTNLSQENMPLELQSTTIEYITNK- 116 (768)
T ss_dssp TTCCCTTCCEECSCCC-BCCSTTTCCBCCTTSCEETTTTEECCTTTCCCCBCCGGGCC---CCCCGGGTCSEEEEECSC-
T ss_pred eCCCCCCCCcCCCCCC-ccCCCCCCeEECCceEEeCCCCEEEcccCCCCCCCChHHccCCcccCChhhccCCEEEECCC-
Confidence 7776677888888875 8854 1 6899999999998888885 4578999999999999996
Q ss_pred ccCCCCCCCcEEEEEEEccHhHHhhchHHHHHHHHHHHHhcCCCCCCceEEEEEEccEEEEEEcCCCCCCCcee------
Q psy14673 306 YTVRDPPQPAMYLFLLDVSQIAAQSGYLYTVCEVLLNQLKSMPGDRRTSIAIITYDSAVHFYSLAEGQTQPSQM------ 379 (912)
Q Consensus 306 y~~r~~~~pp~~vFvID~s~~a~~~g~l~~~~~si~~~L~~lp~~~~~~VglITfd~~V~~y~l~~~~~~~~~~------ 379 (912)
+ ++.||+|+||||+|..+++ ++++|++|+.+|+.||+++ +|||||||+.||||+++.+. .++++
T Consensus 117 ---~-~~~pp~~vFvIDvs~~~~~---l~~l~~sl~~~L~~Lp~~~--~VGlITf~~~V~~y~l~~~~-~~~~~V~~g~k 186 (768)
T 1m2o_A 117 ---P-VTVPPIFFFVVDLTSETEN---LDSLKESIITSLSLLPPNA--LIGLITYGNVVQLHDLSSET-IDRCNVFRGDR 186 (768)
T ss_dssp ---C-CCSCCEEEEEEECCSCHHH---HHHHHHHHHHHHHTSCTTC--EEEEEEESSEEEECCCSSSS-SEEEEEEETTS
T ss_pred ---C-CCCCCEEEEEEECCcCHHH---HHHHHHHHHHHHHhCCCCC--EEEEEEECCEEEEEECCCCC-CcceeeecCCc
Confidence 4 7899999999999999876 8999999999999999876 99999999999999998764 33333
Q ss_pred ----------e--ccC-----c-----cccCCCC---CCCcccchhHhHHHHHHHHHhCCc---cccCCCCCCCcHHHHH
Q psy14673 380 ----------I--LTD-----I-----DDIFLPS---PENILVNLSECYDMIVDLLKQLPG---KFKDSLDSGSALGPAL 431 (912)
Q Consensus 380 ----------v--v~d-----l-----~d~f~p~---~~~~lv~l~e~~~~i~~lL~~L~~---~~~~~~~~~~~~G~AL 431 (912)
+ ++| + +|+|+|. +++||++++||++.|+++|++|+. ++..++++.||+|+||
T Consensus 187 ~~~~~q~~~~l~~l~~~~~~~~~~~~~~~~f~p~~~~~~~~lv~l~e~~~~i~~lL~~L~~~~~~~~~~~~~~~~~G~Al 266 (768)
T 1m2o_A 187 EYQLEALTEMLTGQKPTGPGGAASHLPNAMNKVTPFSLNRFFLPLEQVEFKLNQLLENLSPDQWSVPAGHRPLRATGSAL 266 (768)
T ss_dssp CCCHHHHHHHHHSCCCC---------------CCSSSGGGGSEEHHHHHHHHHHHHHTCCCSCSCCCTTBCCCCCHHHHH
T ss_pred cccHHHHHHHHhhccccccCCccccccccccccccCCccceeeeHHHHHHHHHHHHHhccccccccCCCCCCcccHHHHH
Confidence 3 222 2 5666665 588999999999999999999997 5678899999999999
Q ss_pred HHHHHhhc----CCCCEEEEEecCCCCCCCCcccCCCCCCC-CCC----CC-CCCCCchHHHHHHHHHHHhhCCcEEEEE
Q psy14673 432 QAAFKLLQ----PTGGRITIFQTCLPNRGPGALQSRENPNQ-RSN----DD-PPHMNPATDFYKKIALECTSFYIAVDLF 501 (912)
Q Consensus 432 ~~A~~ll~----~~GGrI~~f~~g~pt~GpG~l~~~~~~~~-~~~----~~-~~~~~~~~~fY~~La~~~~~~~isvdlf 501 (912)
++|..+|+ ..||||++|++|+||.|||+|+.|++++. ++| || +++++++.+||++||.+|+++||+||||
T Consensus 267 ~~A~~ll~~~~~~~GGrI~~F~sg~pt~GpG~l~~r~~~~~~rs~~d~~k~~~~~~~~a~~fY~~la~~~~~~gi~VDlF 346 (768)
T 1m2o_A 267 NIASLLLQGCYKNIPARIILFASGPGTVAPGLIVNSELKDPLRSHHDIDSDHAQHYKKACKFYNQIAQRVAANGHTVDIF 346 (768)
T ss_dssp HHHHHHHHHHCTTSCCEEEEEESSCCCSSSSCCSCSBTTSCCCCHHHHHHTCCTTHHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHhhccCCCCcEEEEEeCCCCCCCCccccccccccccccccccccchhhhcCchHHHHHHHHHHHHHCCeEEEEE
Confidence 99999998 68999999999999999999999987654 243 33 6899999999999999999999999999
Q ss_pred EecCCccChhhhcccccCCCceEEecCCCCCCCchhHHHHHHHHHHhhhc------ccccceeEEEEecCCceEEEEeec
Q psy14673 502 ILNSQYVDLATLSGVSKFSSGCIHHIPLYSGKNMSHVYQLDRMFSRYLTR------KIGFESVMRIRCTKGMSIHTFHGN 575 (912)
Q Consensus 502 ~~s~~~~~l~~l~~l~~~TGG~v~~~~~f~~~~~~~~~~~~~~l~~~l~~------~~g~~a~l~vr~S~gl~i~~~~G~ 575 (912)
+++.+++|+++|+.|++.|||.+++|++|+. ++|..+|.|.+++ ++||+|+||||||+||+|++++||
T Consensus 347 ~~~~~~~dla~l~~l~~~TGG~v~~y~~f~~------~~~~~~l~r~l~~~~~~~~~~gf~a~mrVr~S~gl~v~~~~G~ 420 (768)
T 1m2o_A 347 AGCYDQIGMSEMKQLTDSTGGVLLLTDAFST------AIFKQSYLRLFAKDEEGYLKMAFNGNMAVKTSKDLKVQGLIGH 420 (768)
T ss_dssp EECSSCCSHHHHHHHHHHHTCCEEEESCTTS------HHHHHHHHHTTCBCTTSSBSCEEEEEEEEEECTTEEEEEEESS
T ss_pred EccCCccChHHHhhHhhcCCceEEEcCCCch------HHHHHHHHHHHhhccccccceEEEEEEEEEecCCceEEEeecC
Confidence 9999999999999999999999999999986 5799999999988 799999999999999999999999
Q ss_pred ee----------------ccCCCceeeccCCCCCeEEEEEEEecccC-------------CCceeEEEEEEEeeecCCCe
Q psy14673 576 FF----------------VRSTDLLALPNVNPDAGYGIQISIDENLT-------------HIQYACFQVAVLYTSSKGDR 626 (912)
Q Consensus 576 ~~----------------~~~t~~~~l~~i~~~~si~~~~~~~~~l~-------------~~~~~~iQ~allYt~~~G~r 626 (912)
++ .+++++|+++++++|++|+|+|++++++. +...+|||||++||+.+|+|
T Consensus 421 ~~~~~~~~~~~vsd~~ig~~~t~~~~l~~~~~d~t~~v~f~~~~~~~~~~~~~~~~l~~~~~~~~~iQ~a~lYt~~~G~r 500 (768)
T 1m2o_A 421 ASAVKKTDANNISESEIGIGATSTWKMASLSPYHSYAIFFEIANTAANSNPMMSAPGSADRPHLAYTQFITTYQHSSGTN 500 (768)
T ss_dssp CEECCSCCCSCBCSSCSSBCSCSEEEEEEECTTCCEEEEEEECCC-----------------CEEEEEEEEEEEETTTEE
T ss_pred ccccccccccccCcceeccCCCceEEeecCCCCCEEEEEEEeccccccccccccccccccCCCcEEEEEEEEEEcCCCCE
Confidence 98 46789999999999999999999998763 45789999999999999999
Q ss_pred EEEEEecccccccC-HHHHHhccCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccccCcc
Q psy14673 627 RIRVHTLCLPVVSN-INDVLVGADQACIAGLLAKMAVDRSLQHSLSDAREAFLNVVCDVLSTYKMTQAGHLTGSLLAPSS 705 (912)
Q Consensus 627 riRV~T~~l~vt~~-~~~v~~~~D~~a~~~llak~a~~~~~~~~~~~~r~~l~~~li~~l~~yr~~~~~~~~~~l~lp~~ 705 (912)
||||||++++|+++ +.++|+++|+||++++|+|+|+++++++++.|+|+||+++|++++.+|+.+ .+..+++|+||++
T Consensus 501 riRV~T~~~~~t~~~~~~v~~~~Dqea~~~llar~av~~~~~~~~~d~r~~l~~~li~l~~~~~~Y-rk~~~~~l~lp~~ 579 (768)
T 1m2o_A 501 RIRVTTVANQLLPFGTPAIAASFDQEAAAVLMARIAVHKAETDDGADVIRWLDRTLIKLCQKYADY-NKDDPQSFRLAPN 579 (768)
T ss_dssp EEEEEEEEEEEECTTCHHHHHTBCHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHSBC-CTTCGGGCBCCTT
T ss_pred EEEEEeecccccCccHHHHHHhcCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHH-hcCCccccccCHH
Confidence 99999999999986 899999999999999999999999999999999999999999999887763 5566678999999
Q ss_pred cChHHHHHHHHhcCccccCCCCCChhHHHHHHHHHcCCChhhhHhhhcceeeecccCCCCCCccccCCcccCCccccccc
Q psy14673 706 LKLLPLYVLALLKHPAFRIGQSTRLDDRLFAMTEMKCLPLNSLMLSIYPELYPIHTLDQDPTIEWNELQVPIPRILQLSA 785 (912)
Q Consensus 706 l~~lP~~~~~L~ks~~l~~~~~~s~Der~~~~~~l~~~~~~~~~~~iyP~L~~~~~~~~~~~~~~~~~~~~~P~~l~Ls~ 785 (912)
||+||+|||+|+||++|+.+ ++++|||+|+++.++++++..++.||||+||+||. ++ .|..++||.
T Consensus 580 lk~lP~~~~~L~ks~~l~~~-~~spDer~~~~~~l~~~~~~~~l~~iyP~L~~~~~---------~~----~P~~v~Ls~ 645 (768)
T 1m2o_A 580 FSLYPQFTYYLRRSQFLSVF-NNSPDETAFYRHIFTREDTTNSLIMIQPTLTSFSM---------ED----DPQPVLLDS 645 (768)
T ss_dssp TTHHHHHHHHHHHSTTTCCT-TSCHHHHHHHHHHHTTSCHHHHHHHHSCEEEEECS---------SS----CCEECCSBG
T ss_pred HHHHHHHHHHHhcccccCCC-CCChhHHHHHHHHHHcCCHHHHHHhhCCeEEEecC---------CC----CCcceeCcH
Confidence 99999999999999999986 89999999999999999999999999999999994 11 356688999
Q ss_pred cccccCeEEEEeCCceEEEEecCCCChhHHhhccCCCCcCCCCcccccCCCCchHHHHHHHHHHHHHhhcCCCcccEEEE
Q psy14673 786 ERLQATGTYLLNMPDLIIILVRHGTSPAICSGLFGFQSVAQMPETLFELPQLETQLSLKLNSFISYLNDDKAYVSPVKVI 865 (912)
Q Consensus 786 ~~l~~~giyLlD~g~~i~i~vg~~v~~~~~~~lfg~~~~~~~~~~~~~lp~~d~~~~~~~~~~i~~l~~~r~~~~p~~iv 865 (912)
++|++|||||||+|+.|+||+|+++++|+....++.+.++++.+ +.++|+. -++.|..+| ++.|++|+
T Consensus 646 ~~l~~~gi~LLD~g~~i~i~~G~~v~~~~~~~~~~~~~~~~~~~-ll~~p~~----------~a~~i~~~R-~p~Pr~i~ 713 (768)
T 1m2o_A 646 ISVKPNTILLLDTFFFILIYHGEQIAQWRKAGYQDDPQYADFKA-LLEEPKL----------EAAELLVDR-FPLPRFID 713 (768)
T ss_dssp GGCCTTCEEEEECSSEEEEEECHHHHHHHHHTGGGSTTCHHHHH-HHHHHHH----------HHHHHHHTC-SSCCEEEE
T ss_pred HHcCCCCEEEEECCCEEEEEECCcchHHHhcccCCCchhhhHHH-HhhhhHH----------HHHHHHhcC-CCCceEEE
Confidence 99999999999999999999999999887544444555544322 2233322 233444444 88999999
Q ss_pred eCCCCcHHHHHHHh-cccCC-------------CCCCCHHHHHHHHHHHHHhh
Q psy14673 866 KDSSPDRMEFYDKL-IEDKN-------------AGGMAYYEFLLRIRDYQASV 904 (912)
Q Consensus 866 ~~~~~~~~~f~~~l-veD~~-------------~~~~Sy~~fl~~l~~~i~~~ 904 (912)
++.+++++||+..+ .+|.+ .+++||.+||+||||+||+.
T Consensus 714 ~~~~~sqarfl~s~L~p~~~~~~~~~~~~~~i~tdd~S~~~f~~~L~k~~v~~ 766 (768)
T 1m2o_A 714 TEAGGSQARFLLSKLNPSDNYQDMARGGSTIVLTDDVSLQNFMTHLQQVAVSG 766 (768)
T ss_dssp EETTCGGGHHHHTTSBCC-----------CCCCCCSCCHHHHHHHHHHHHCC-
T ss_pred ECCCCcHHHHHHHHcCCCccccccccCCccccccCCcCHHHHHHHHHHHHhcc
Confidence 98888999999655 45543 25799999999999999864
No 7
>2nut_A Protein transport protein SEC23A; human copii SEC23/24 complexed with SEC22, protein transport; 2.30A {Homo sapiens} PDB: 2nup_A 3egd_A 3eg9_A 3egx_A 3efo_A
Probab=100.00 E-value=3e-112 Score=1031.25 Aligned_cols=615 Identities=17% Similarity=0.230 Sum_probs=525.5
Q ss_pred ccccCCCCCCCcCCCCCCCCC----------------CCcCccCcccccCCCCCCCC---CCCCcccc--ccccEEEEec
Q psy14673 245 LLNTRDILPATKVEPPPIRLP----------------QNLPEIHEQFLYDRNTEMFG---DPYRRPEI--QSATVEYLAT 303 (912)
Q Consensus 245 pl~~r~~lP~~~~~P~~~~~~----------------~~~~~~p~~~~~~~~~~~~~---d~~~rpEL--~~~tvEy~~p 303 (912)
|+.+...+|.+.+.|+ +|.+ ++.|.|++|+..|.++..|. +.+.|||| +++||||++|
T Consensus 48 P~~~~~~~p~v~~~pv-RC~~~~CrayiNPf~~~~~~~~~W~C~~C~~~N~~P~~Y~~~~~~~~~pEL~p~~~tvEy~~~ 126 (769)
T 2nut_A 48 PLKERPDLPPIQYEPV-LCSRTTCRAVLNPLCQVDYRAKLWACNFCYQRNQFPPSYAGISELNQPAELLPQFSSIEYVVL 126 (769)
T ss_dssp TTCCCSCCCCBCSCCC-BCSSTTCCCBCCTTSEEETTTTEEECSSSCCEEECCGGGTTCBTTBCCGGGSGGGSSEEEEEC
T ss_pred eCCCCCCCCcCCCCCC-cCCCCCCCeEECCceEEeCCCCEEEccCCCCCCCCChHHccCCcccCChhhcCCCCcEEEEcc
Confidence 7777778899999875 8854 26899999999998888874 45789999 8999999999
Q ss_pred ccccCCCCCCCcEEEEEEEccHhHHhhchHHHHHHHHHHHHhcCCCCCCceEEEEEEccEEEEEEcCCCC----------
Q psy14673 304 ADYTVRDPPQPAMYLFLLDVSQIAAQSGYLYTVCEVLLNQLKSMPGDRRTSIAIITYDSAVHFYSLAEGQ---------- 373 (912)
Q Consensus 304 ~~y~~r~~~~pp~~vFvID~s~~a~~~g~l~~~~~si~~~L~~lp~~~~~~VglITfd~~V~~y~l~~~~---------- 373 (912)
++| +.||+||||||+|.++++ ++++|++|+.+|+.||+++ +|||||||+.||||+++.+.
T Consensus 127 ~~~-----p~pp~~vFvIDvS~~a~~---l~~l~~si~~~L~~Lp~~~--~VGlITf~~~v~~y~l~~~~~~~~~vf~G~ 196 (769)
T 2nut_A 127 RGP-----QMPLIFLYVVDTCMEDED---LQALKESMQMSLSLLPPTA--LVGLITFGRMVQVHELGCEGISKSYVFRGT 196 (769)
T ss_dssp SSC-----CCCCEEEEEEECCSCHHH---HHHHHHHHHHHHTTSCTTC--EEEEEEESSEEEEEESSCCSSCEEEEEETT
T ss_pred CCC-----CCCCEEEEEEECCccHHH---HHHHHHHHHHHHHhCCCCc--eEEEEEeCCEEEEEeCCCCCCccceeecCC
Confidence 876 689999999999999887 8999999999999999876 99999999999999999764
Q ss_pred -----CCCce-eeccC----c-----cccC-CCCCCCcccchhHhHHHHHHHHHhCCc-cc--cCCCCCCCcHHHHHHHH
Q psy14673 374 -----TQPSQ-MILTD----I-----DDIF-LPSPENILVNLSECYDMIVDLLKQLPG-KF--KDSLDSGSALGPALQAA 434 (912)
Q Consensus 374 -----~~~~~-~vv~d----l-----~d~f-~p~~~~~lv~l~e~~~~i~~lL~~L~~-~~--~~~~~~~~~~G~AL~~A 434 (912)
+++++ ++++| + +|+| +|. ++||++++||++.|+++|++|+. +| ..++++.||+|+||++|
T Consensus 197 k~~~~~q~~~ml~v~d~~~~~~~~~~~~~f~~p~-~~~lv~~~e~~~~i~~lLe~L~~~~~~~~~~~~~~~a~G~Al~~A 275 (769)
T 2nut_A 197 KDLSAKQLQEMLGLSKVPVTQATRGPQVQQPPPS-NRFLQPVQKIDMNLTDLLGELQRDPWPVPQGKRPLRSSGVALSIA 275 (769)
T ss_dssp SCCCSHHHHHHHC-------------------CC-CSSSEEHHHHHHHHHHHHHHCCCCSSCCCTTBCCCCCHHHHHHHH
T ss_pred ccccHHHHHHHhCCCCcccccccccccccCCCcc-cceeeeHHHHHHHHHHHHHhcccccccccCCCCCccchHHHHHHH
Confidence 23333 44664 3 7887 455 89999999999999999999997 55 67889999999999999
Q ss_pred HHhhc----CCCCEEEEEecCCCCCCCCcccCCCCCCC-CCC----CC-CCCCCchHHHHHHHHHHHhhCCcEEEEEEec
Q psy14673 435 FKLLQ----PTGGRITIFQTCLPNRGPGALQSRENPNQ-RSN----DD-PPHMNPATDFYKKIALECTSFYIAVDLFILN 504 (912)
Q Consensus 435 ~~ll~----~~GGrI~~f~~g~pt~GpG~l~~~~~~~~-~~~----~~-~~~~~~~~~fY~~La~~~~~~~isvdlf~~s 504 (912)
..+|+ ..||||++|++|+||.|||+|+.|+++.. ++| || +++++++.+||++||.+|+++||+||+|+++
T Consensus 276 ~~lL~~~~~~~GGrI~~F~sg~pt~GpG~l~~r~~~~~~rs~~d~~ke~~~~~~~a~~fY~~la~~~~~~gi~VDlF~~~ 355 (769)
T 2nut_A 276 VGLLECTFPNTGARIMMFIGGPATQGPGMVVGDELKTPIRSWHDIDKDNAKYVKKGTKHFEALANRAATTGHVIDIYACA 355 (769)
T ss_dssp HHHHHHHSCSSCCEEEEEESSCCCSSSSCCSCSBTTSCCCCHHHHHTTCCTTHHHHHHHHHHHHHHHHHHTCEEEEEEEC
T ss_pred HHHHhhcccCCCcEEEEEeCCCCCCCCCCCcCcccccccccccccccchhhhccchHHHHHHHHHHHHHCCeEEEEEecc
Confidence 99999 78999999999999999999999986654 233 45 6899999999999999999999999999999
Q ss_pred CCccChhhhcccccCCCceEEecCCCCCCCchhHHHHHHHHHHhhhc------ccccceeEEEEecCCceEEEEeecee-
Q psy14673 505 SQYVDLATLSGVSKFSSGCIHHIPLYSGKNMSHVYQLDRMFSRYLTR------KIGFESVMRIRCTKGMSIHTFHGNFF- 577 (912)
Q Consensus 505 ~~~~~l~~l~~l~~~TGG~v~~~~~f~~~~~~~~~~~~~~l~~~l~~------~~g~~a~l~vr~S~gl~i~~~~G~~~- 577 (912)
.+++|+++|+.|++.|||.+++|++|+. +.|..+|.+.+++ ++||+|+||||||+||+|++++||++
T Consensus 356 ~~~vdla~l~~l~~~TGG~~~~~~~F~~------~~~~~~l~~~~~~~~~~~l~~gf~a~mrVr~S~gl~v~~~~G~~~~ 429 (769)
T 2nut_A 356 LDQTGLLEMKCCPNLTGGYMVMGDSFNT------SLFKQTFQRVFTKDMHGQFKMGFGGTLEIKTSREIKISGAIGPCVS 429 (769)
T ss_dssp SSCCCHHHHTHHHHHSSCCEEEESCSSS------HHHHHHHHHTTCBCTTSCBSCEEEEEEEEEECTTEEEEEEESSCEE
T ss_pred CCccChHHHHHHhhcCCceEEEcCCCch------hhHHHHHHHHHhhhcccccceEEEEEEEEEecCCeEEEeeeccccc
Confidence 9999999999999999999999999986 4677777777766 79999999999999999999999987
Q ss_pred --------------ccCCCceeeccCCCCCeEEEEEEEecc----cCCCceeEEEEEEEeeecCCCeEEEEEeccccccc
Q psy14673 578 --------------VRSTDLLALPNVNPDAGYGIQISIDEN----LTHIQYACFQVAVLYTSSKGDRRIRVHTLCLPVVS 639 (912)
Q Consensus 578 --------------~~~t~~~~l~~i~~~~si~~~~~~~~~----l~~~~~~~iQ~allYt~~~G~rriRV~T~~l~vt~ 639 (912)
.++|++|+++++++|++|+|+|+++++ +.+...+|||||++||+.+|+|||||||++++|++
T Consensus 430 ~~~~~~~vsd~~~g~~~t~~~~l~~~~~d~s~~v~f~~~~~~~~~l~~~~~~~~Q~a~lYt~~~G~rRiRV~T~~~~~t~ 509 (769)
T 2nut_A 430 LNSKGPCVSENEIGTGGTCQWKICGLSPTTTLAIYFEVVNQHNAPIPQGGRGAIQFVTQYQHSSGQRRIRVTTIARNWAD 509 (769)
T ss_dssp CCCCCTTBCSSCCSBCSCSEEEEEEECTTCCEEEEEEEC----------CCEEEEEEEEEEETTSCEEEEEEEEEECBCC
T ss_pred cccccCccccceeccCCCceEEeecCCCCCEEEEEEEecCccccccCCCCeEEEEEEEEEECCCCCEEEEEEeecccccC
Confidence 578899999999999999999999987 44567899999999999999999999999999999
Q ss_pred CH---HHHHhccCHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHhhcCCCCCccccCcccChHHHHHHHH
Q psy14673 640 NI---NDVLVGADQACIAGLLAKMAVDRSLQHSLSDAREAFLNVVCDVLSTYKMTQAGHLTGSLLAPSSLKLLPLYVLAL 716 (912)
Q Consensus 640 ~~---~~v~~~~D~~a~~~llak~a~~~~~~~~~~~~r~~l~~~li~~l~~yr~~~~~~~~~~l~lp~~l~~lP~~~~~L 716 (912)
++ .++|+++|+||++++|+|+|+++++++++.|+|+||++++++++..|+.+ .+..+++|+||++||+||+|||+|
T Consensus 510 ~~~~~~~v~~~~Dqea~~~llar~a~~~~~~~~~~d~~~~ld~~li~l~~~~~~Y-rk~~~~sl~lp~~lkllP~~~~~L 588 (769)
T 2nut_A 510 AQTQIQNIAASFDQEAAAILMARLAIYRAETEEGPDVLRWLDRQLIRLCQKFGEY-HKDDPSSFRFSETFSLYPQFMFHL 588 (769)
T ss_dssp GGGHHHHHHHTBCHHHHHHHHHHHHHHHHTTC---CHHHHHHHHHHHHHHHHCBC-CTTCGGGCBCCTTTTTHHHHHHHH
T ss_pred CcccHHHHHHhcCHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHH-hCcCcccccccHHHHHHHHHHHHH
Confidence 87 59999999999999999999999999999999999999999999888763 556677899999999999999999
Q ss_pred hcCccccCCCCCChhHHHHHHHHHcCCChhhhHhhhcceeeecccCCCCCCccccCCcccCCccccccccccccCeEEEE
Q psy14673 717 LKHPAFRIGQSTRLDDRLFAMTEMKCLPLNSLMLSIYPELYPIHTLDQDPTIEWNELQVPIPRILQLSAERLQATGTYLL 796 (912)
Q Consensus 717 ~ks~~l~~~~~~s~Der~~~~~~l~~~~~~~~~~~iyP~L~~~~~~~~~~~~~~~~~~~~~P~~l~Ls~~~l~~~giyLl 796 (912)
+||++|+.+ ++++|||+|+++.++++++..++.||||+||+||.. + .|..++||.++|++||||||
T Consensus 589 ~ks~~l~~~-~~spDer~~~~~~l~~~~~~~~~~~iyP~L~~~~~~---------~----~P~~v~ls~~~l~~~gi~LL 654 (769)
T 2nut_A 589 RRSSFLQVF-NNSPDESSYYRHHFMRQDLTQSLIMIQPILYAYSFS---------G----PPEPVLLDSSSILADRILLM 654 (769)
T ss_dssp HHSTTTCCT-TSCHHHHHHHHHHHTTCCHHHHHHHHSCEEEEECSS---------S----SCEECCSSGGGCCTTCEEEE
T ss_pred hcccccCCC-CCCccHHHHHHHHHHcCCHHHHHHhhcCEEEeccCC---------C----CCCceeCCHHHccCCCEEEE
Confidence 999999986 899999999999999999999999999999999941 1 35668899999999999999
Q ss_pred eCCceEEEEecCCCChhHHhhccCCCCcCCCCcccccCCCCchHHHHHHHHHHHHHhhcCCCcccEEEEeCCCCcHHHHH
Q psy14673 797 NMPDLIIILVRHGTSPAICSGLFGFQSVAQMPETLFELPQLETQLSLKLNSFISYLNDDKAYVSPVKVIKDSSPDRMEFY 876 (912)
Q Consensus 797 D~g~~i~i~vg~~v~~~~~~~lfg~~~~~~~~~~~~~lp~~d~~~~~~~~~~i~~l~~~r~~~~p~~iv~~~~~~~~~f~ 876 (912)
|+|+.|+||+|+++++|+...+++.+.++++. +.-+..+..++.|..+| ++.|++|+++.+++++||+
T Consensus 655 D~g~~i~i~~G~~v~~w~~~~~~~~p~~~~~~-----------~~l~~p~~~a~~i~~~R-~p~Pr~i~~~~g~sqaRfl 722 (769)
T 2nut_A 655 DTFFQILIYHGETIAQWRKSGYQDMPEYENFR-----------HLLQAPVDDAQEILHSR-FPMPRYIDTEHGGSQARFL 722 (769)
T ss_dssp ECSSEEEEEECHHHHHHHHHTTTTSGGGHHHH-----------HHHHHHHHHHHHHHHHS-SSCCEEEEEETTCSTTHHH
T ss_pred ECCCEEEEEECCcchHHHhCCCCCCchhhhHH-----------HHHHhHHHHHHHHHhcC-CCCCeEEEEcCCCcHHHHH
Confidence 99999999999999999865443332222111 11223455666676666 8999999999999999999
Q ss_pred HHhcccCC-----------------CCCCCHHHHHHHHHHHHHhh
Q psy14673 877 DKLIEDKN-----------------AGGMAYYEFLLRIRDYQASV 904 (912)
Q Consensus 877 ~~lveD~~-----------------~~~~Sy~~fl~~l~~~i~~~ 904 (912)
..++++.. .+|+||.+||.||+|.+|+.
T Consensus 723 ~sklnps~~~~~~~~~~~~~~~~~~tddvsl~~f~~~l~~~~v~~ 767 (769)
T 2nut_A 723 LSKVNPSQTHNNMYAWGQESGAPILTDDVSLQVFMDHLKKLAVSS 767 (769)
T ss_dssp HHHCC----------------------CCSHHHHHHHHHHHHSSC
T ss_pred HHhcCCcccccCCCcCCCcCCccccccccCHHHHHHHHHHHhhcC
Confidence 99999843 14899999999999999864
No 8
>4fx5_A VON willebrand factor type A; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, blood clotting; HET: MSE; 1.73A {Catenulispora acidiphila}
Probab=99.28 E-value=5.7e-09 Score=120.03 Aligned_cols=306 Identities=10% Similarity=0.052 Sum_probs=194.1
Q ss_pred CCcEEEEEEEccHhHHh-hchHHHHHHHHHHHHhcCCCCCCceEEEEEEccEEEEEEcCCCCCCCceeeccCccccCCCC
Q psy14673 313 QPAMYLFLLDVSQIAAQ-SGYLYTVCEVLLNQLKSMPGDRRTSIAIITYDSAVHFYSLAEGQTQPSQMILTDIDDIFLPS 391 (912)
Q Consensus 313 ~pp~~vFvID~s~~a~~-~g~l~~~~~si~~~L~~lp~~~~~~VglITfd~~V~~y~l~~~~~~~~~~vv~dl~d~f~p~ 391 (912)
.+..++||||+|.+... ..-++.++++++..|+.|+++. +||||+|++.+..+-- .
T Consensus 76 ~~~dvv~VLD~SGSM~~~~~rl~~ak~a~~~ll~~L~~~d--rv~lV~Fs~~a~~~~p---------------------~ 132 (464)
T 4fx5_A 76 SENVEVIIIDCSGSMDYPRTKMMAAKEATKVAIDTLTDGA--FFAVVAGTEGARVVYP---------------------T 132 (464)
T ss_dssp CCEEEEEEEECCGGGGTTTHHHHHHHHHHHHHHHHSCTTC--EEEEEEESSSEEEEES---------------------S
T ss_pred CCceEEEEEEcCcccCCCCchHHHHHHHHHHHHHhCCCCC--EEEEEEEcCceEEEec---------------------C
Confidence 34669999999986541 2348899999999999998766 8999999988765311 0
Q ss_pred CCCcccch-hHhHHHHHHHHHhCCccccCCCCCCCcHHHHHHHHHHhhcCCC---CEEEEEecCCCCCCCCcccCCCCCC
Q psy14673 392 PENILVNL-SECYDMIVDLLKQLPGKFKDSLDSGSALGPALQAAFKLLQPTG---GRITIFQTCLPNRGPGALQSRENPN 467 (912)
Q Consensus 392 ~~~~lv~l-~e~~~~i~~lL~~L~~~~~~~~~~~~~~G~AL~~A~~ll~~~G---GrI~~f~~g~pt~GpG~l~~~~~~~ 467 (912)
. ..+++. .+.++.+...|+.|.. ...++++.||..|..+|.... ..||++++|.++.+.
T Consensus 133 t-~~l~~~~~~~~~~l~~~I~~L~~------~GgT~l~~aL~~A~~~l~~~~~~~~~IILLTDG~~~~~~---------- 195 (464)
T 4fx5_A 133 G-GQLLRADYQSRAAAKEAVGRLHA------NGGTAMGRWLAQAGRIFDTAPSAIKHAILLTDGKDESET---------- 195 (464)
T ss_dssp S-SSCEECSHHHHHHHHHHHHTCCC------CSCCCHHHHHHHHHHHHTTCTTSEEEEEEEESSCCTTSC----------
T ss_pred C-cccccCCHHHHHHHHHHHHcCCC------CCCCcHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCCCCC----------
Confidence 0 001111 2356677778888752 456899999999999997632 478999999876521
Q ss_pred CCCCCCCCCCCchHHHHHHHHHHHhhCCcEEEEEEecCCccChhhhcccccCCCceEEecCCCCCCCchhHHHHHHHHHH
Q psy14673 468 QRSNDDPPHMNPATDFYKKIALECTSFYIAVDLFILNSQYVDLATLSGVSKFSSGCIHHIPLYSGKNMSHVYQLDRMFSR 547 (912)
Q Consensus 468 ~~~~~~~~~~~~~~~fY~~La~~~~~~~isvdlf~~s~~~~~l~~l~~l~~~TGG~v~~~~~f~~~~~~~~~~~~~~l~~ 547 (912)
...... +.++...+|.|..|.++. ..|...|..++..|||..++.+++.. -.+.|.+.+.+
T Consensus 196 ------------~~~l~~--~~~a~~~~i~i~tiGiG~-~~d~~~L~~IA~~tgG~~~~v~d~~~----L~~~f~~i~~~ 256 (464)
T 4fx5_A 196 ------------PADLAR--AIQSSIGNFTADCRGIGE-DWEPKELRKIADALLGTVGIIRDPAT----LAEDFREMTAK 256 (464)
T ss_dssp ------------HHHHHH--HHHHHTTTCEEEEEEESS-SSCHHHHHHHHHHTTCCEEEESSGGG----HHHHHHHHHHH
T ss_pred ------------hHHHHH--HHHHhcCCCeEEEEEeCC-ccCHHHHHHHHHhCCCEEEEcCCHHH----HHHHHHHHHHH
Confidence 011111 223456789999888864 47888999999999999998877653 12344444443
Q ss_pred hhhcccccceeEEEEecCCceEEEEee--c----eecc-----C--CCceeeccCCCCCeEEEEEEEecc-cCCCceeE-
Q psy14673 548 YLTRKIGFESVMRIRCTKGMSIHTFHG--N----FFVR-----S--TDLLALPNVNPDAGYGIQISIDEN-LTHIQYAC- 612 (912)
Q Consensus 548 ~l~~~~g~~a~l~vr~S~gl~i~~~~G--~----~~~~-----~--t~~~~l~~i~~~~si~~~~~~~~~-l~~~~~~~- 612 (912)
+.....-++.++|++..|+.+..+.. + ...+ + ...+.++.+ .+.+-.|.+++.-. ...+...-
T Consensus 257 -~~s~~~~dv~l~l~~~~g~~v~~v~~v~P~~~~l~~~~~~~~~~~~~~v~lG~l-~~e~r~~lv~l~v~~~~~g~~~~~ 334 (464)
T 4fx5_A 257 -SMGKEVADVALRLWAPKGATIRYVKQVSPNLADLSGMRVPGDNPLTGDYPTGAW-GAESREYHICVEVEPGNIGQEKLA 334 (464)
T ss_dssp -HHTCCEEEEEEEEECCTTCEEEEEEEEESBCEECGGGCEECSSTTEEEEEEEEE-SSEEEEEEEEEECCCCCTTCEEEE
T ss_pred -hhchheeeeEEEEEeCCCcEEEEEEeecccccccCcccccCCCCcEEEEECCcC-CCCeEEEEEEEEcCCCCCCceeEE
Confidence 44567789999999999988876522 1 1111 1 235677777 66655555555422 22233333
Q ss_pred EEEEEEeeecCCCeEEEEEecccccccCHHHHHhccCHHHHHH-------HHHHHHHHHHhcCCHHHHHHHHHHH
Q psy14673 613 FQVAVLYTSSKGDRRIRVHTLCLPVVSNINDVLVGADQACIAG-------LLAKMAVDRSLQHSLSDAREAFLNV 680 (912)
Q Consensus 613 iQ~allYt~~~G~rriRV~T~~l~vt~~~~~v~~~~D~~a~~~-------llak~a~~~~~~~~~~~~r~~l~~~ 680 (912)
.++.+.|.+..|++.+.=..+...++.... .-..+|.++.-. -..+.+......++...|.+.|...
T Consensus 335 ~~v~~~y~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~V~~~~~~~~~a~~~~~a~~~~~~gd~~~A~~~L~~A 408 (464)
T 4fx5_A 335 GRVQLVAKDAGGATLLGEGKIRAVWTEDTD-LSTRINGRVAHYTGQAEMAAAIQEGLDAQAAGDLDTATARLGRA 408 (464)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEEEECSCHH-HHSCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred EEEEEEEcCCCccccccccceEEEEEcccc-ccCCCCHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 799999999888733222244445555432 222344433321 1113344455567777777766554
No 9
>3ibs_A Conserved hypothetical protein BATB; structural genomics, protein structure, midwest center for S genomics, MCSG, PSI-2; HET: MSE; 2.10A {Bacteroides thetaiotaomicron}
Probab=98.79 E-value=1.9e-07 Score=96.18 Aligned_cols=174 Identities=14% Similarity=0.189 Sum_probs=125.9
Q ss_pred CCCCcEEEEEEEccHhHHhh----chHHHHHHHHHHHHhcCCCCCCceEEEEEEccEEEEEEcCCCCCCCceeeccCccc
Q psy14673 311 PPQPAMYLFLLDVSQIAAQS----GYLYTVCEVLLNQLKSMPGDRRTSIAIITYDSAVHFYSLAEGQTQPSQMILTDIDD 386 (912)
Q Consensus 311 ~~~pp~~vFvID~s~~a~~~----g~l~~~~~si~~~L~~lp~~~~~~VglITfd~~V~~y~l~~~~~~~~~~vv~dl~d 386 (912)
+..+..++||||+|...... ..++.+++++...++.++++ +||||+|++..++.-
T Consensus 8 ~~~~~~iv~vlD~SgSM~~~d~~~~r~~~ak~~~~~~~~~~~~~---~v~lv~F~~~~~~~~------------------ 66 (218)
T 3ibs_A 8 KRKGVEVIIALDISNSMLAQDVQPSRLEKAKRLISRLVDELDND---KVGMIVFAGDAFTQL------------------ 66 (218)
T ss_dssp --CCCEEEEEEECSGGGGCCSSSSCHHHHHHHHHHHHHHTCSSC---EEEEEEESSSEEEEE------------------
T ss_pred ccCCCcEEEEEECCcCcccccCCcCHHHHHHHHHHHHHHhCCCC---eEEEEEECCCceEeC------------------
Confidence 34678899999999875432 26889999999999999733 899999987655320
Q ss_pred cCCCCCCCcccchhHhHHHHHHHHHhCCccccCCCCCCCcHHHHHHHHHHhhcCC---CCEEEEEecCCCCCCCCcccCC
Q psy14673 387 IFLPSPENILVNLSECYDMIVDLLKQLPGKFKDSLDSGSALGPALQAAFKLLQPT---GGRITIFQTCLPNRGPGALQSR 463 (912)
Q Consensus 387 ~f~p~~~~~lv~l~e~~~~i~~lL~~L~~~~~~~~~~~~~~G~AL~~A~~ll~~~---GGrI~~f~~g~pt~GpG~l~~~ 463 (912)
| +...++.+..+|+.|.... .....+.++.||..|..++... ...|+++++|.++.| .
T Consensus 67 ---~--------~~~~~~~~~~~l~~l~~~~--~~~g~T~l~~al~~a~~~l~~~~~~~~~ivllTDG~~~~~--~---- 127 (218)
T 3ibs_A 67 ---P--------ITSDYISAKMFLESISPSL--ISKQGTAIGEAINLATRSFTPQEGVGRAIIVITDGENHEG--G---- 127 (218)
T ss_dssp ---E--------EESCHHHHHHHHHTCCGGG--CCSCSCCHHHHHHHHHTTSCSCSSCCEEEEEEECCTTCCS--C----
T ss_pred ---C--------CCCCHHHHHHHHHhcCccc--CCCCCCcHHHHHHHHHHHHhhCCCCCcEEEEEcCCCCCCC--c----
Confidence 1 1112455677788886321 1245689999999999999753 358888899887765 0
Q ss_pred CCCCCCCCCCCCCCCchHHHHHHHHHHHhhCCcEEEEEEecCC------------------------ccChhhhcccccC
Q psy14673 464 ENPNQRSNDDPPHMNPATDFYKKIALECTSFYIAVDLFILNSQ------------------------YVDLATLSGVSKF 519 (912)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~fY~~La~~~~~~~isvdlf~~s~~------------------------~~~l~~l~~l~~~ 519 (912)
..+.+..+.+.||.|..+.+..+ ..|...|..+|..
T Consensus 128 --------------------~~~~~~~~~~~~i~v~~igig~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~~L~~iA~~ 187 (218)
T 3ibs_A 128 --------------------AVEAAKAAAEKGIQVSVLGVGMPEGAPIPVEGTNDYRRDREGNVIVTRLNEGMCQEIAKD 187 (218)
T ss_dssp --------------------HHHHHHHHHTTTEEEEEEEESCTTCEECBCTTSSCBCBCTTSCBCEECCCHHHHHHHHHH
T ss_pred --------------------HHHHHHHHHhcCCEEEEEEecCCCCCcccccCCCceeEcCCCCEeEecCCHHHHHHHHHh
Confidence 25677888899999999988764 5678889999999
Q ss_pred CCceEEecCCCCCCCchhHHHHHHHHHHh
Q psy14673 520 SSGCIHHIPLYSGKNMSHVYQLDRMFSRY 548 (912)
Q Consensus 520 TGG~v~~~~~f~~~~~~~~~~~~~~l~~~ 548 (912)
|||..++..+-. ...+.+.+.|.+.
T Consensus 188 ~gG~~~~~~~~~----~~~~~~~~~i~~l 212 (218)
T 3ibs_A 188 GKGIYVRVDNSN----SAQKAISQEISKM 212 (218)
T ss_dssp TEEEEEEECSSS----HHHHHHHHHHHHH
T ss_pred cCCEEEECCCCh----HHHHHHHHHHHHh
Confidence 999988876522 2345566666554
No 10
>1ijb_A VON willebrand factor; dinucleotide-binding fold, blood clotting; 1.80A {Homo sapiens} SCOP: c.62.1.1 PDB: 1ijk_A 1auq_A 1u0n_A 3hxo_A 1uex_C 3hxq_A 1sq0_A 1m10_A 1fns_A 1oak_A 1u0o_C
Probab=98.40 E-value=8.5e-06 Score=82.92 Aligned_cols=162 Identities=10% Similarity=0.078 Sum_probs=109.1
Q ss_pred CcEEEEEEEccHhHHhhchHHHHHHHHHHHHhcCCCC-CCceEEEEEEccEEEEE-EcCCCCCCCceeeccCccccCCCC
Q psy14673 314 PAMYLFLLDVSQIAAQSGYLYTVCEVLLNQLKSMPGD-RRTSIAIITYDSAVHFY-SLAEGQTQPSQMILTDIDDIFLPS 391 (912)
Q Consensus 314 pp~~vFvID~s~~a~~~g~l~~~~~si~~~L~~lp~~-~~~~VglITfd~~V~~y-~l~~~~~~~~~~vv~dl~d~f~p~ 391 (912)
+.-.+||||+|...- ..-++.+++.++..++.+.-. ...+||+|+|++.++.. .+. +
T Consensus 13 ~~divfvlD~SgSm~-~~~~~~~k~~~~~~v~~l~~~~~~~rv~vv~fs~~~~~~~~l~------------~-------- 71 (202)
T 1ijb_A 13 LLDLVFLLDGSSRLS-EAEFEVLKAFVVDMMERLRVSQKWVRVAVVEYHDGSHAYIGLK------------D-------- 71 (202)
T ss_dssp CEEEEEEEECBTTSC-HHHHHHHHHHHHHHHHTBCBSTTSEEEEEEEESSSEEEEECTT------------C--------
T ss_pred cccEEEEEECCCCCC-HHHHHHHHHHHHHHHHhcccCCCceEEEEEEECCCceEEEecC------------C--------
Confidence 677999999997532 234788999999999988722 24699999999876542 111 0
Q ss_pred CCCcccchhHhHHHHHHHHHhCCccccCCCCCCCcHHHHHHHHHH-hhcC---CC--CEEEEEecCCCCCCCCcccCCCC
Q psy14673 392 PENILVNLSECYDMIVDLLKQLPGKFKDSLDSGSALGPALQAAFK-LLQP---TG--GRITIFQTCLPNRGPGALQSREN 465 (912)
Q Consensus 392 ~~~~lv~l~e~~~~i~~lL~~L~~~~~~~~~~~~~~G~AL~~A~~-ll~~---~G--GrI~~f~~g~pt~GpG~l~~~~~ 465 (912)
+ ..++.+...|+.|... ....+.+|.||..|.. ++.. .+ -.|+++++|.++.|. .
T Consensus 72 ---~-----~~~~~~~~~i~~l~~~----gg~~T~~~~aL~~a~~~~~~~~~r~~~~~~iillTDG~~~~~~-----~-- 132 (202)
T 1ijb_A 72 ---R-----KRPSELRRIASQVKYA----GSQVASTSEVLKYTLFQIFSKIDRPEASRIALLLMASQEPQRM-----S-- 132 (202)
T ss_dssp ---C-----CCHHHHHHHHHTCCCC----CBSCCCHHHHHHHHHHHTSSSCSCTTSEEEEEEEECCCCCGGG-----C--
T ss_pred ---C-----CCHHHHHHHHHhCcCC----CCCcCcHHHHHHHHHHHHhccCCCCCCCeEEEEEccCCCCccc-----h--
Confidence 0 1244566777877531 1124899999999974 5542 11 258888888775430 0
Q ss_pred CCCCCCCCCCCCCchHHHHHHHHHHHhhCCcEEEEEEecCCccChhhhcccccC-CCceEEecCCCCC
Q psy14673 466 PNQRSNDDPPHMNPATDFYKKIALECTSFYIAVDLFILNSQYVDLATLSGVSKF-SSGCIHHIPLYSG 532 (912)
Q Consensus 466 ~~~~~~~~~~~~~~~~~fY~~La~~~~~~~isvdlf~~s~~~~~l~~l~~l~~~-TGG~v~~~~~f~~ 532 (912)
+-..+.+..+.+.||.|-.+.+.. ..|..+|..++.. +||.+|+.++|+.
T Consensus 133 ----------------~~~~~~a~~l~~~gi~i~~igvG~-~~~~~~L~~iA~~~~~~~~~~~~~~~~ 183 (202)
T 1ijb_A 133 ----------------RNFVRYVQGLKKKKVIVIPVGIGP-HANLKQIRLIEKQAPENKAFVLSSVDE 183 (202)
T ss_dssp ----------------TTHHHHHHHHHHTTEEEEEEEEST-TSCHHHHHHHHHHCTTCCCEEESSGGG
T ss_pred ----------------HHHHHHHHHHHHCCCEEEEEecCC-cCCHHHHHHHhCCCCcccEEEeCCHHH
Confidence 012456677778888776666653 4788889999874 6889998888764
No 11
>1q0p_A Complement factor B; VON willebrand factor, MAC-1, I domain, A domain, hydrolase; 1.80A {Homo sapiens} SCOP: c.62.1.1
Probab=98.37 E-value=9.1e-06 Score=83.64 Aligned_cols=172 Identities=16% Similarity=0.244 Sum_probs=109.1
Q ss_pred CCCCcEEEEEEEccHhHHhhchHHHHHHHHHHHHhcCCC-CCCceEEEEEEccEEEEEEcCCCCCCCceeeccCccccCC
Q psy14673 311 PPQPAMYLFLLDVSQIAAQSGYLYTVCEVLLNQLKSMPG-DRRTSIAIITYDSAVHFYSLAEGQTQPSQMILTDIDDIFL 389 (912)
Q Consensus 311 ~~~pp~~vFvID~s~~a~~~g~l~~~~~si~~~L~~lp~-~~~~~VglITfd~~V~~y~l~~~~~~~~~~vv~dl~d~f~ 389 (912)
+..+.-++||||+|..... ..++.+++++...++.+.. +...+||+|+|++.++..- ++.+
T Consensus 12 ~~~~~div~vlD~SgSM~~-~~~~~~k~~~~~~i~~l~~~~~~~~v~lv~f~~~~~~~~--------------~~~~--- 73 (223)
T 1q0p_A 12 PSGSMNIYLVLDGSDSIGA-SNFTGAKKSLVNLIEKVASYGVKPRYGLVTYATYPKIWV--------------KVSE--- 73 (223)
T ss_dssp ---CEEEEEEEECSTTTCH-HHHHHHHHHHHHHHHHHHTTTCCCEEEEEEESSSEEEEE--------------CTTS---
T ss_pred CCCceeEEEEEeCCCCCch-HHHHHHHHHHHHHHHHHhcCCCCceEEEEEecCccceee--------------cccc---
Confidence 4568889999999975432 2377788888888766543 2235999999998765421 0000
Q ss_pred CCCCCcccchhHhHHHHHHHHHhCCccccCCCCCCCcHHHHHHHHHHhhcCCC-----------CEEEEEecCCCCCCCC
Q psy14673 390 PSPENILVNLSECYDMIVDLLKQLPGKFKDSLDSGSALGPALQAAFKLLQPTG-----------GRITIFQTCLPNRGPG 458 (912)
Q Consensus 390 p~~~~~lv~l~e~~~~i~~lL~~L~~~~~~~~~~~~~~G~AL~~A~~ll~~~G-----------GrI~~f~~g~pt~GpG 458 (912)
+....++.+...|+.|.... ......+.+|.||..|...|...+ ..|+++++|.++.|.
T Consensus 74 --------~~~~~~~~~~~~i~~l~~~~-~~~~g~T~~~~aL~~a~~~l~~~~~~~~~~~~~~~~~iillTDG~~~~g~- 143 (223)
T 1q0p_A 74 --------ADSSNADWVTKQLNEINYED-HKLKSGTNTKKALQAVYSMMSWPDDVPPEGWNRTRHVIILMTDGLHNMGG- 143 (223)
T ss_dssp --------GGGGCHHHHHHHHHTCCTTS-CSCTTCCCHHHHHHHHHHHHCCTTSSCCTTGGGCEEEEEEEECSCCCSSS-
T ss_pred --------CCCCCHHHHHHHHHhccccc-ccCCCCccHHHHHHHHHHHhhccccccccccccCCeEEEEECCCCCCCCC-
Confidence 11223456677788875321 013567899999999999987421 258889999988762
Q ss_pred cccCCCCCCCCCCCCCCCCCchHHHHHHHH---------HHHhhCCcEEEEEEecCCccChhhhcccccCCCc--eEEec
Q psy14673 459 ALQSRENPNQRSNDDPPHMNPATDFYKKIA---------LECTSFYIAVDLFILNSQYVDLATLSGVSKFSSG--CIHHI 527 (912)
Q Consensus 459 ~l~~~~~~~~~~~~~~~~~~~~~~fY~~La---------~~~~~~~isvdlf~~s~~~~~l~~l~~l~~~TGG--~v~~~ 527 (912)
++ ...-+.+. ..+.+.||.|..+.++. .++...|..++..||| .++..
T Consensus 144 ------~~--------------~~~~~~~~~~~~~~~~~~~~~~~~i~i~~igvG~-~~~~~~L~~iA~~~~G~~~~~~~ 202 (223)
T 1q0p_A 144 ------DP--------------ITVIDEIRDLLYIGKDRKNPREDYLDVYVFGVGP-LVNQVNINALASKKDNEQHVFKV 202 (223)
T ss_dssp ------CT--------------HHHHHHHHHHTTCSCBTTBCCGGGEEEEEEECSS-CCCHHHHHHHSCCCTTCCCEEET
T ss_pred ------Ch--------------HHHHHHHHHHHhhhhhhhhcccCCcEEEEEEecC-cCCHHHHHHHhcCCCCCceEEEc
Confidence 00 01112221 22345667666666543 4788999999999999 78877
Q ss_pred CCCC
Q psy14673 528 PLYS 531 (912)
Q Consensus 528 ~~f~ 531 (912)
.++.
T Consensus 203 ~~~~ 206 (223)
T 1q0p_A 203 KDME 206 (223)
T ss_dssp TC--
T ss_pred CCHH
Confidence 7665
No 12
>1shu_X Anthrax toxin receptor 2; alpha/beta rossmann fold, membrane protein; 1.50A {Homo sapiens} SCOP: c.62.1.1 PDB: 1tzn_a 1sht_X 1t6b_Y*
Probab=98.35 E-value=1.2e-05 Score=79.96 Aligned_cols=159 Identities=15% Similarity=0.104 Sum_probs=102.7
Q ss_pred CCcEEEEEEEccHhHHhhchHHHHHHHHHHHHhcCCCCCCceEEEEEEccEEEEEEcCCCCCCCceeeccCccccCCCCC
Q psy14673 313 QPAMYLFLLDVSQIAAQSGYLYTVCEVLLNQLKSMPGDRRTSIAIITYDSAVHFYSLAEGQTQPSQMILTDIDDIFLPSP 392 (912)
Q Consensus 313 ~pp~~vFvID~s~~a~~~g~l~~~~~si~~~L~~lp~~~~~~VglITfd~~V~~y~l~~~~~~~~~~vv~dl~d~f~p~~ 392 (912)
.|.-++||||+|..... ... ..++.++..+..+-. ++.+||+|+|++..+..- |
T Consensus 5 ~~~dvv~vlD~SgSM~~-~~~-~~~~~~~~~~~~~~~-~~~~v~lv~f~~~~~~~~---------------------~-- 58 (182)
T 1shu_X 5 RAFDLYFVLDKSGSVAN-NWI-EIYNFVQQLAERFVS-PEMRLSFIVFSSQATIIL---------------------P-- 58 (182)
T ss_dssp SCEEEEEEEECSGGGGG-GHH-HHHHHHHHHHHHCCC-TTEEEEEEEESSSEEEEE---------------------E--
T ss_pred CceeEEEEEECCCCccc-CHH-HHHHHHHHHHHHhcC-CCceEEEEEeCCCceEEE---------------------C--
Confidence 46789999999986443 222 244555555555432 346999999988765321 0
Q ss_pred CCcccchhHhHHHHHHHHHhCCccccCCCCCCCcHHHHHHHHHHhhcC-----CCCEEEEEecCCCCCCCCcccCCCCCC
Q psy14673 393 ENILVNLSECYDMIVDLLKQLPGKFKDSLDSGSALGPALQAAFKLLQP-----TGGRITIFQTCLPNRGPGALQSRENPN 467 (912)
Q Consensus 393 ~~~lv~l~e~~~~i~~lL~~L~~~~~~~~~~~~~~G~AL~~A~~ll~~-----~GGrI~~f~~g~pt~GpG~l~~~~~~~ 467 (912)
+...++.+..+|+.|... .....+.+|.||..|..++.. ....|+++++|.++.+
T Consensus 59 ------~~~~~~~~~~~l~~l~~~---~~~g~T~~~~al~~a~~~l~~~~~~~~~~~iiliTDG~~~~~----------- 118 (182)
T 1shu_X 59 ------LTGDRGKISKGLEDLKRV---SPVGETYIHEGLKLANEQIQKAGGLKTSSIIIALTDGKLDGL----------- 118 (182)
T ss_dssp ------EECCHHHHHHHHHHHHTC---CCCSCCCHHHHHHHHHHHHHHHTGGGSCEEEEEEECCCCCTT-----------
T ss_pred ------CCCCHHHHHHHHHhcccC---CCCCCchHHHHHHHHHHHHHhccCCCCCeEEEEECCCCcCCC-----------
Confidence 001233455556655422 123478899999999999853 3467888888876521
Q ss_pred CCCCCCCCCCCchHHHHHHHHHHHhhCCcEEEEEEecCCccChhhhcccccCCCceEEecCCCC
Q psy14673 468 QRSNDDPPHMNPATDFYKKIALECTSFYIAVDLFILNSQYVDLATLSGVSKFSSGCIHHIPLYS 531 (912)
Q Consensus 468 ~~~~~~~~~~~~~~~fY~~La~~~~~~~isvdlf~~s~~~~~l~~l~~l~~~TGG~v~~~~~f~ 531 (912)
........+..+.+.||.|..+.+. ..+..+|..++..+||..+.-.+|.
T Consensus 119 ------------~~~~~~~~~~~~~~~~i~i~~igvg--~~~~~~L~~ia~~~~~~~~~~~~~~ 168 (182)
T 1shu_X 119 ------------VPSYAEKEAKISRSLGASVYCVGVL--DFEQAQLERIADSKEQVFPVKGGFQ 168 (182)
T ss_dssp ------------HHHHHHHHHHHHHHTTCEEEEEECS--SCCHHHHHHHSSSGGGEEESSSTTH
T ss_pred ------------CchhHHHHHHHHHhCCCEEEEEeCC--cCCHHHHHHHhCCCCceEEccCCHH
Confidence 1123456778888899887777765 5688899999999877544332443
No 13
>4b4t_W RPN10, 26S proteasome regulatory subunit RPN10; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=98.32 E-value=8e-07 Score=93.67 Aligned_cols=148 Identities=13% Similarity=0.123 Sum_probs=102.0
Q ss_pred EEEEEEEccHhHHhh----chHHHHHHHHHHHHhcCCC-CCCceEEEEEEcc-EEEEEEcCCCCCCCceeeccCccccCC
Q psy14673 316 MYLFLLDVSQIAAQS----GYLYTVCEVLLNQLKSMPG-DRRTSIAIITYDS-AVHFYSLAEGQTQPSQMILTDIDDIFL 389 (912)
Q Consensus 316 ~~vFvID~s~~a~~~----g~l~~~~~si~~~L~~lp~-~~~~~VglITfd~-~V~~y~l~~~~~~~~~~vv~dl~d~f~ 389 (912)
+-|||||+|...... ..+++.++++...++.+.. ++.-+||||+|.. ...++
T Consensus 5 AtViviD~S~SM~~~D~~PsRl~a~k~Av~~li~~~~~~nPed~VGLVtfag~~~~vl---------------------- 62 (268)
T 4b4t_W 5 ATVLVIDNSEYSRNGDFPRTRFEAQIDSVEFIFQAKRNSNPENTVGLISGAGANPRVL---------------------- 62 (268)
T ss_dssp EEEEEECCSSTTSSTTSSSCHHHHHHHHHHHHHHHHHHHCTTCEEEEEECCTTSCEEE----------------------
T ss_pred eEEEEEECCHHHhCCCCCCcHHHHHHHHHHHHHHHHhhCCCcceEEEEEecCCcceec----------------------
Confidence 468999999875422 2578888888777754311 2222899999953 22221
Q ss_pred CCCCCcccchhHhHHHHHHHHHhCCccccCCCCCCCcHHHHHHHHHHhhcCC---C--CEEEEEecCCCCCCCCcccCCC
Q psy14673 390 PSPENILVNLSECYDMIVDLLKQLPGKFKDSLDSGSALGPALQAAFKLLQPT---G--GRITIFQTCLPNRGPGALQSRE 464 (912)
Q Consensus 390 p~~~~~lv~l~e~~~~i~~lL~~L~~~~~~~~~~~~~~G~AL~~A~~ll~~~---G--GrI~~f~~g~pt~GpG~l~~~~ 464 (912)
+++...+..|...|+.|. ....+.++.||..|..+|+.. + -|||+|++|+-+.
T Consensus 63 -------~plT~D~~~il~aL~~l~------~~G~T~l~~gL~~A~~aLk~~~~k~~~~rIIlf~ds~~~~--------- 120 (268)
T 4b4t_W 63 -------STFTAEFGKILAGLHDTQ------IEGKLHMATALQIAQLTLKHRQNKVQHQRIVAFVCSPISD--------- 120 (268)
T ss_dssp -------EEEESCHHHHHHHHTTCC------CCSCCCHHHHHHHHHHHHHTCSCTTSEEEEEEEECSCCSS---------
T ss_pred -------cCCcchHHHHHHHhhhcC------cCCCCChHHHHHHHHHHHHhcccCCCceEEEEEECCCCCC---------
Confidence 111223456777788774 346789999999999999752 2 3899999986321
Q ss_pred CCCCCCCCCCCCCCchHHHHHHHHHHHhhCCcEEEEEEecCCccChhhhcccccCCCc
Q psy14673 465 NPNQRSNDDPPHMNPATDFYKKIALECTSFYIAVDLFILNSQYVDLATLSGVSKFSSG 522 (912)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~fY~~La~~~~~~~isvdlf~~s~~~~~l~~l~~l~~~TGG 522 (912)
..+-..++++++.++||.||++.|..+..+-..|..+++..+|
T Consensus 121 ---------------~~~~l~~lak~lkk~gI~v~vIgFG~~~~n~~kLe~l~~~~Ng 163 (268)
T 4b4t_W 121 ---------------SRDELIRLAKTLKKNNVAVDIINFGEIEQNTELLDEFIAAVNN 163 (268)
T ss_dssp ---------------CHHHHHHHHHHHHHHTEEEEEEEESSCCSSCCHHHHHHHHHCS
T ss_pred ---------------CHHHHHHHHHHHHHcCCEEEEEEeCCCccchHHHHHHHHHhcC
Confidence 1233578999999999999999999876677777777665544
No 14
>4hqf_A Thrombospondin-related anonymous protein, trap; malaria, parasite motility, I domain, TSR domain, receptor O sporozoite, vaccine target; 2.20A {Plasmodium falciparum} PDB: 4hqk_A 2bbx_A
Probab=98.31 E-value=7.7e-06 Score=87.83 Aligned_cols=166 Identities=11% Similarity=0.098 Sum_probs=112.5
Q ss_pred CCcEEEEEEEccHhHHhhchHHHHHHHHHHHHhcCCCC-CCceEEEEEEccEEEEE-EcCCCCCCCceeeccCccccCCC
Q psy14673 313 QPAMYLFLLDVSQIAAQSGYLYTVCEVLLNQLKSMPGD-RRTSIAIITYDSAVHFY-SLAEGQTQPSQMILTDIDDIFLP 390 (912)
Q Consensus 313 ~pp~~vFvID~s~~a~~~g~l~~~~~si~~~L~~lp~~-~~~~VglITfd~~V~~y-~l~~~~~~~~~~vv~dl~d~f~p 390 (912)
.+.-++||||.|.......+++.++++++..++.+... ...+||||+|++.++.. .+....
T Consensus 20 ~~~div~vlD~SgSM~~~~~~~~~k~~~~~~v~~l~~~~~~~rvglv~Fs~~~~~~~~l~~~~----------------- 82 (281)
T 4hqf_A 20 DEVDLYLLMDGSGSIRRHNWVNHAVPLAMKLIQQLNLNDNAIHLYASVFSNNAREIIRLHSDA----------------- 82 (281)
T ss_dssp SCEEEEEEEECCCCSSTHHHHHHHHHHHHHHHTTCCCCTTSEEEEEEEEETTEEEEEEECSSC-----------------
T ss_pred CceeEEEEEeCCCCcCHHHHHHHHHHHHHHHHHHhccCCCCcEEEEEEcCCCceEEEEccccC-----------------
Confidence 47789999999986544456688999999999998752 34699999999876532 222100
Q ss_pred CCCCcccchhHhHHHHHHHHHhCCccccCCCCCCCcHHHHHHHHHHhhcCCCC------EEEEEecCCCCCCCCcccCCC
Q psy14673 391 SPENILVNLSECYDMIVDLLKQLPGKFKDSLDSGSALGPALQAAFKLLQPTGG------RITIFQTCLPNRGPGALQSRE 464 (912)
Q Consensus 391 ~~~~~lv~l~e~~~~i~~lL~~L~~~~~~~~~~~~~~G~AL~~A~~ll~~~GG------rI~~f~~g~pt~GpG~l~~~~ 464 (912)
...++.+...|+.|... ......+.+|.||..|...+...++ .||++++|.++-+
T Consensus 83 ---------~~~~~~l~~~i~~l~~~--~~~~G~T~~~~aL~~a~~~l~~~~~r~~~~~~iillTDG~~~d~-------- 143 (281)
T 4hqf_A 83 ---------SKNKEKALIIIKSLLST--NLPYGKTSLTDALLQVRKHLNDRINRENANQLVVILTDGIPDSI-------- 143 (281)
T ss_dssp ---------SSCHHHHHHHHHHHHHT--TGGGCSCCHHHHHHHHHHHHHTSCCCTTCEEEEEEEESSCCSCH--------
T ss_pred ---------ccCHHHHHHHHHHHhhc--cCCCCCccHHHHHHHHHHHHHhccCCCCCCEEEEEEecCCCCCc--------
Confidence 00123444555555421 0123478899999999887765433 4888888876521
Q ss_pred CCCCCCCCCCCCCCchHHHHHHHHHHHhhCCcEEEEEEecCCccChhhhcccccC--CCc--eEEecCCCCC
Q psy14673 465 NPNQRSNDDPPHMNPATDFYKKIALECTSFYIAVDLFILNSQYVDLATLSGVSKF--SSG--CIHHIPLYSG 532 (912)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~fY~~La~~~~~~~isvdlf~~s~~~~~l~~l~~l~~~--TGG--~v~~~~~f~~ 532 (912)
.-..+.+..+.+.||.|-.+.+..+ .+-..|..++.. +|| .+++..+|+.
T Consensus 144 -----------------~~~~~~~~~l~~~gv~i~~igiG~~-~~~~~L~~iA~~~~~~g~~~~~~~~~~~~ 197 (281)
T 4hqf_A 144 -----------------QDSLKESRKLSDRGVKIAVFGIGQG-INVAFNRFLVGCHPSDGKCNLYADSAWEN 197 (281)
T ss_dssp -----------------HHHHHHHHHHHHTTCEEEEEEESSS-CCHHHHHHHTTSCSSSSCCTTEEEECGGG
T ss_pred -----------------HHHHHHHHHHHHCCCEEEEEeCCCc-cCHHHHHhhhCCCCCCCCCceEEecchhh
Confidence 1234567778889988777776554 777888888876 676 7888888874
No 15
>3n2n_F Anthrax toxin receptor 1; rossmann fold; 1.80A {Homo sapiens} SCOP: c.62.1.1
Probab=98.29 E-value=8.8e-06 Score=81.18 Aligned_cols=158 Identities=9% Similarity=0.031 Sum_probs=105.0
Q ss_pred CCcEEEEEEEccHhHHhhchHHHHHHHHHHHHhcCCCCCCceEEEEEEccEEEEEEcCCCCCCCceeeccCccccCCCCC
Q psy14673 313 QPAMYLFLLDVSQIAAQSGYLYTVCEVLLNQLKSMPGDRRTSIAIITYDSAVHFYSLAEGQTQPSQMILTDIDDIFLPSP 392 (912)
Q Consensus 313 ~pp~~vFvID~s~~a~~~g~l~~~~~si~~~L~~lp~~~~~~VglITfd~~V~~y~l~~~~~~~~~~vv~dl~d~f~p~~ 392 (912)
.|.-++||||+|..... . ...+++.++..++.+-. ++.+||+|+|++.+++.- |
T Consensus 6 ~~~div~vlD~SgSM~~-~-~~~~~~~~~~~~~~~~~-~~~~v~lv~f~~~~~~~~---------------------~-- 59 (185)
T 3n2n_F 6 GGFDLYFILDKSGSVLH-H-WNEIYYFVEQLAHKFIS-PQLRMSFIVFSTRGTTLM---------------------K-- 59 (185)
T ss_dssp SEEEEEEEEECSGGGGG-G-HHHHHHHHHHHHHHCCC-TTEEEEEEEESSSEEEEE---------------------E--
T ss_pred CCeeEEEEEeCCCChhh-h-HHHHHHHHHHHHHHhCC-CCcEEEEEEEecCceEEe---------------------c--
Confidence 35668999999986443 2 56677777777766633 357999999988765421 0
Q ss_pred CCcccchhHhHHHHHHHHHhCCccccCCCCCCCcHHHHHHHHHHhhc--CCC-----CEEEEEecCCCCCCCCcccCCCC
Q psy14673 393 ENILVNLSECYDMIVDLLKQLPGKFKDSLDSGSALGPALQAAFKLLQ--PTG-----GRITIFQTCLPNRGPGALQSREN 465 (912)
Q Consensus 393 ~~~lv~l~e~~~~i~~lL~~L~~~~~~~~~~~~~~G~AL~~A~~ll~--~~G-----GrI~~f~~g~pt~GpG~l~~~~~ 465 (912)
+.+.++.+...|+.|... .....+.+|.||..|...+. ..+ ..|+++++|.++.++
T Consensus 60 ------l~~~~~~~~~~i~~l~~~---~~~g~T~~~~al~~a~~~l~~~~~~~~~~~~~iillTDG~~~~~~-------- 122 (185)
T 3n2n_F 60 ------LTEDREQIRQGLEELQKV---LPGGDTYMHEGFERASEQIYYENRQGYRTASVIIALTDGELHEDL-------- 122 (185)
T ss_dssp ------EECCHHHHHHHHHHHHTC---CCCSCCCHHHHHHHHHHHHHHHHTTCBCEEEEEEEEECCCCCHHH--------
T ss_pred ------cCCCHHHHHHHHHHHhhh---cCCCCccHHHHHHHHHHHHhhccccCCCCCcEEEEEcCCCCCCCc--------
Confidence 111344556666666532 23456889999999999772 222 367788887654321
Q ss_pred CCCCCCCCCCCCCchHHHHHHHHHHHhhCCcEEEEEEecCCccChhhhcccccCCCceEEecCC-CC
Q psy14673 466 PNQRSNDDPPHMNPATDFYKKIALECTSFYIAVDLFILNSQYVDLATLSGVSKFSSGCIHHIPL-YS 531 (912)
Q Consensus 466 ~~~~~~~~~~~~~~~~~fY~~La~~~~~~~isvdlf~~s~~~~~l~~l~~l~~~TGG~v~~~~~-f~ 531 (912)
..-..+.+..+.+.||.|..+.+. ..+-.+|..++.. +|.+|+..+ |+
T Consensus 123 ---------------~~~~~~~~~~~~~~gi~i~~igvg--~~~~~~L~~iA~~-~~~~~~~~~~~~ 171 (185)
T 3n2n_F 123 ---------------FFYSEREANRSRDLGAIVYAVGVK--DFNETQLARIADS-KDHVFPVNDGFQ 171 (185)
T ss_dssp ---------------HHHHHHHHHHHHHTTEEEEEEECS--SCCHHHHTTTSSS-GGGEEEHHHHHH
T ss_pred ---------------ccchHHHHHHHHHCCCEEEEEEec--cCCHHHHHHHhCC-CCCeEEeccHHH
Confidence 011256788888899877777665 6788999999965 677877654 54
No 16
>1atz_A VON willebrand factor; collagen-binding, hemostasis, dinucleotide binding fold; 1.80A {Homo sapiens} SCOP: c.62.1.1 PDB: 4dmu_B 2adf_A 1fe8_A 1ao3_A
Probab=98.26 E-value=1.7e-05 Score=79.62 Aligned_cols=158 Identities=18% Similarity=0.158 Sum_probs=109.2
Q ss_pred CCcEEEEEEEccHhHHhhchHHHHHHHHHHHHhcCCC-CCCceEEEEEEccEEEEEEcCCCCCCCceeeccCccccCCCC
Q psy14673 313 QPAMYLFLLDVSQIAAQSGYLYTVCEVLLNQLKSMPG-DRRTSIAIITYDSAVHFYSLAEGQTQPSQMILTDIDDIFLPS 391 (912)
Q Consensus 313 ~pp~~vFvID~s~~a~~~g~l~~~~~si~~~L~~lp~-~~~~~VglITfd~~V~~y~l~~~~~~~~~~vv~dl~d~f~p~ 391 (912)
.+.-.+||||+|.... ..-++.+++.+...++.++. ..+.+||+|+|++.+++.- |+
T Consensus 4 ~~~div~vlD~SgSm~-~~~~~~~k~~~~~~~~~l~~~~~~~rv~lv~f~~~~~~~~---------------------~l 61 (189)
T 1atz_A 4 QPLDVILLLDGSSSFP-ASYFDEMKSFAKAFISKANIGPRLTQVSVLQYGSITTIDV---------------------PW 61 (189)
T ss_dssp CCEEEEEEEECSSSSC-HHHHHHHHHHHHHHHHHSCBSTTSEEEEEEEESSSEEEEE---------------------CT
T ss_pred CceeEEEEEeCCCCCC-hhhHHHHHHHHHHHHHhcCcCCCCeEEEEEEECCcceEEE---------------------ec
Confidence 4677999999997633 23478899999999988863 3457999999998765420 00
Q ss_pred CCCcccchhHhHHHHHHHHHhCCccccCCCCCCCcHHHHHHHHHHhhcC--CC-----CE-EEEEecCCCCCCCCcccCC
Q psy14673 392 PENILVNLSECYDMIVDLLKQLPGKFKDSLDSGSALGPALQAAFKLLQP--TG-----GR-ITIFQTCLPNRGPGALQSR 463 (912)
Q Consensus 392 ~~~~lv~l~e~~~~i~~lL~~L~~~~~~~~~~~~~~G~AL~~A~~ll~~--~G-----Gr-I~~f~~g~pt~GpG~l~~~ 463 (912)
.. ...++.+...|+.|.. ....+.+|.||..|...+.. .| .| |+++++|.++-+
T Consensus 62 ~~------~~~~~~~~~~i~~l~~-----~~g~T~~~~aL~~a~~~l~~~~~g~r~~~~~~vivltdg~~~~~------- 123 (189)
T 1atz_A 62 NV------VPEKAHLLSLVDVMQR-----EGGPSQIGDALGFAVRYLTSEMHGARPGASKAVVILVTDVSVDS------- 123 (189)
T ss_dssp TC------CCCHHHHHHHHHTCCC-----CCCCCCHHHHHHHHHHHHHSCCTTCCTTSEEEEEEEECSCCSSC-------
T ss_pred CC------CCCHHHHHHHHHhCcC-----CCCcchHHHHHHHHHHHHhccccCCCCCCCcEEEEEeCCCCCch-------
Confidence 00 0124556677777753 24568999999999987743 11 25 677888754311
Q ss_pred CCCCCCCCCCCCCCCchHHHHHHHHHHHhhCCcEEEEEEecCCccChhhhcccccCCCc-eEEecCCCC
Q psy14673 464 ENPNQRSNDDPPHMNPATDFYKKIALECTSFYIAVDLFILNSQYVDLATLSGVSKFSSG-CIHHIPLYS 531 (912)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~fY~~La~~~~~~~isvdlf~~s~~~~~l~~l~~l~~~TGG-~v~~~~~f~ 531 (912)
..+.+..+.+.||.|..+.+.. ..+..+|..++..++| .++...+|.
T Consensus 124 --------------------~~~~~~~~~~~gi~v~~igvG~-~~~~~~L~~iA~~~~~~~~~~~~~~~ 171 (189)
T 1atz_A 124 --------------------VDAAADAARSNRVTVFPIGIGD-RYDAAQLRILAGPAGDSNVVKLQRIE 171 (189)
T ss_dssp --------------------CHHHHHHHHHTTEEEEEEEESS-SSCHHHHHHHTGGGGGGGCEEESSTT
T ss_pred --------------------HHHHHHHHHHCCCEEEEEEcCC-cCCHHHHHHHHCCCcccCEEEecChh
Confidence 1456777788998887777754 3678899999998875 567666665
No 17
>1n3y_A Integrin alpha-X; alpha/beta rossmann fold, cell adhesion; 1.65A {Homo sapiens} SCOP: c.62.1.1
Probab=98.25 E-value=6.9e-06 Score=82.97 Aligned_cols=161 Identities=11% Similarity=0.115 Sum_probs=107.0
Q ss_pred CCcEEEEEEEccHhHHhhchHHHHHHHHHHHHhcCCCCCCceEEEEEEccEEEEE-EcCCCCCCCceeeccCccccCCCC
Q psy14673 313 QPAMYLFLLDVSQIAAQSGYLYTVCEVLLNQLKSMPGDRRTSIAIITYDSAVHFY-SLAEGQTQPSQMILTDIDDIFLPS 391 (912)
Q Consensus 313 ~pp~~vFvID~s~~a~~~g~l~~~~~si~~~L~~lp~~~~~~VglITfd~~V~~y-~l~~~~~~~~~~vv~dl~d~f~p~ 391 (912)
.+.-.+||||+|..... ..++.+++.++..++.+. ..+.+||+|+|++.++.. .+. +..
T Consensus 8 ~~~div~vlD~SgSM~~-~~~~~~~~~~~~~~~~l~-~~~~~v~lv~f~~~~~~~~~~~------------~~~------ 67 (198)
T 1n3y_A 8 QEQDIVFLIDGSGSISS-RNFATMMNFVRAVISQFQ-RPSTQFSLMQFSNKFQTHFTFE------------EFR------ 67 (198)
T ss_dssp CCEEEEEEEECCTTSCH-HHHHHHHHHHHHHHTTSC-TTTEEEEEEEESSSEEEEECHH------------HHH------
T ss_pred CCeeEEEEEECCCCCCH-HHHHHHHHHHHHHHHhcC-CCCcEEEEEEeCCCccEEEecC------------ccC------
Confidence 46789999999975432 235678889999998884 334599999999876532 110 000
Q ss_pred CCCcccchhHhHHHHHHHHHhCCccccCCCCCCCcHHHHHHHHH-HhhcC-------CCCEEEEEecCCCCCCCCcccCC
Q psy14673 392 PENILVNLSECYDMIVDLLKQLPGKFKDSLDSGSALGPALQAAF-KLLQP-------TGGRITIFQTCLPNRGPGALQSR 463 (912)
Q Consensus 392 ~~~~lv~l~e~~~~i~~lL~~L~~~~~~~~~~~~~~G~AL~~A~-~ll~~-------~GGrI~~f~~g~pt~GpG~l~~~ 463 (912)
.++.+...|+.|.. ....+.+|.||..|. .++.. ....|+++++|.++.++-
T Consensus 68 ----------~~~~~~~~i~~l~~-----~~g~T~~~~al~~a~~~l~~~~~~~r~~~~~~iillTDG~~~~~~~----- 127 (198)
T 1n3y_A 68 ----------RSSNPLSLLASVHQ-----LQGFTYTATAIQNVVHRLFHASYGARRDAAKILIVITDGKKEGDSL----- 127 (198)
T ss_dssp ----------HCSSGGGGGTTCCC-----CCSCBCHHHHHHHHHTTTTSGGGTCCTTSEEEEEEEESSCCBSCSS-----
T ss_pred ----------CHHHHHHHHhcCcC-----CCCCchHHHHHHHHHHHHhCcccCCCCCCceEEEEECCCCCCCCcc-----
Confidence 00111122333321 235789999999999 55543 124688999998874320
Q ss_pred CCCCCCCCCCCCCCCchHHHHHHHHHHHhhCCcEEEEEEecCCc---cChhhhcccccCCCceE-EecCCCCC
Q psy14673 464 ENPNQRSNDDPPHMNPATDFYKKIALECTSFYIAVDLFILNSQY---VDLATLSGVSKFSSGCI-HHIPLYSG 532 (912)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~fY~~La~~~~~~~isvdlf~~s~~~---~~l~~l~~l~~~TGG~v-~~~~~f~~ 532 (912)
-+.+.+..+.+.||.|..+.+..+. .+...|..++..|||.. +..+++..
T Consensus 128 -------------------~~~~~~~~~~~~gi~i~~igvG~~~~~~~~~~~L~~iA~~~~g~~~~~~~~~~~ 181 (198)
T 1n3y_A 128 -------------------DYKDVIPMADAAGIIRYAIGVGLAFQNRNSWKELNDIASKPSQEHIFKVEDFDA 181 (198)
T ss_dssp -------------------CHHHHHHHHHHTTCEEEEEEESGGGGSSTTHHHHHHHSCSSSGGGEEEESSGGG
T ss_pred -------------------cHHHHHHHHHHCCCEEEEEEccccccccccHHHHHHHHcCCCcccEEEeCCHHH
Confidence 0245677788899998888876654 36899999999999974 66666653
No 18
>1v7p_C Integrin alpha-2; snake venom, C-type lectin, antagonist, cell adhes glycoprotein, toxin-cell adhesion complex; HET: NAG; 1.90A {Homo sapiens} SCOP: c.62.1.1 PDB: 1aox_A 1dzi_A
Probab=98.25 E-value=2e-05 Score=79.89 Aligned_cols=161 Identities=11% Similarity=0.088 Sum_probs=107.6
Q ss_pred CCcEEEEEEEccHhHHhhchHHHHHHHHHHHHhcCCC-CCCceEEEEEEccEEEEEEcCCCCCCCceeeccCccccCCCC
Q psy14673 313 QPAMYLFLLDVSQIAAQSGYLYTVCEVLLNQLKSMPG-DRRTSIAIITYDSAVHFYSLAEGQTQPSQMILTDIDDIFLPS 391 (912)
Q Consensus 313 ~pp~~vFvID~s~~a~~~g~l~~~~~si~~~L~~lp~-~~~~~VglITfd~~V~~y~l~~~~~~~~~~vv~dl~d~f~p~ 391 (912)
.+.-.+||||+|.... . ++.+++.++..++.+.. ....+||+|+|++.++..- ++.+
T Consensus 5 ~~~div~vlD~SgSm~--~-~~~~k~~~~~~~~~l~~~~~~~rvglv~f~~~~~~~~--------------~l~~----- 62 (200)
T 1v7p_C 5 SLIDVVVVCDESNSIY--P-WDAVKNFLEKFVQGLDIGPTKTQVGLIQYANNPRVVF--------------NLNT----- 62 (200)
T ss_dssp -CEEEEEEEECCTTCC--C-HHHHHHHHHHHHHTSCBSTTSEEEEEEEESSSEEEEE--------------CTTT-----
T ss_pred CcccEEEEEECCCCcc--c-HHHHHHHHHHHHHhcCCCCCceEEEEEEECCCceEEE--------------eCCC-----
Confidence 4677899999998533 2 78899999999988862 1246999999998765310 0100
Q ss_pred CCCcccchhHhHHHHHHHHHhCCccccCCCCCCCcHHHHHHHHHHh-hcC-CC------CEEEEEecCCCCCCCCcccCC
Q psy14673 392 PENILVNLSECYDMIVDLLKQLPGKFKDSLDSGSALGPALQAAFKL-LQP-TG------GRITIFQTCLPNRGPGALQSR 463 (912)
Q Consensus 392 ~~~~lv~l~e~~~~i~~lL~~L~~~~~~~~~~~~~~G~AL~~A~~l-l~~-~G------GrI~~f~~g~pt~GpG~l~~~ 463 (912)
+ ..++.+.+.|+.|... ....+.+|.||..|... +.. .| ..|+++++|.++.+.
T Consensus 63 ---~-----~~~~~~~~~i~~l~~~----~G~~T~~~~al~~a~~~~~~~~~g~r~~~~~~ivllTDG~~~~~~------ 124 (200)
T 1v7p_C 63 ---Y-----KTKEEMIVATSQTSQY----GGDLTNTFGAIQYARKYAYSAASGGRRSATKVMVVVTDGESHDGS------ 124 (200)
T ss_dssp ---C-----SSHHHHHHHHHHCCCC----CCSCCCHHHHHHHHHHHTTSGGGTCCTTSEEEEEEEESSCCSCGG------
T ss_pred ---c-----CCHHHHHHHHHhhhcc----CCCCCcHHHHHHHHHHhhcccccCCCCCCCeEEEEEccCCCCCcc------
Confidence 0 1234455666766421 11258899999999984 542 12 248889998876321
Q ss_pred CCCCCCCCCCCCCCCchHHHHHHHHHHHhhCCcEEEEEEecC----CccC----hhhhcccccCCCce-EEecCCCCC
Q psy14673 464 ENPNQRSNDDPPHMNPATDFYKKIALECTSFYIAVDLFILNS----QYVD----LATLSGVSKFSSGC-IHHIPLYSG 532 (912)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~fY~~La~~~~~~~isvdlf~~s~----~~~~----l~~l~~l~~~TGG~-v~~~~~f~~ 532 (912)
-+.+.+.++.+.||.|..+.+.. ..++ ..+|..++..|||. +|..++|..
T Consensus 125 -------------------~~~~~~~~~~~~gi~i~~igvg~~~~~~~~~~~~~~~~L~~iA~~~~g~~~~~~~~~~~ 183 (200)
T 1v7p_C 125 -------------------MLKAVIDQCNHDNILRFGIAVLGYLNRNALDTKNLIKEIKAIASIPTERYFFNVSDEAA 183 (200)
T ss_dssp -------------------GHHHHHHHHHHTTEEEEEEEECHHHHHTTCCCHHHHHHHHHHSCSSHHHHEEEESSSGG
T ss_pred -------------------cHHHHHHHHHHCCCEEEEEEecccccccccchhhHHHHHHHHhCCccHhcEEEcCCHHH
Confidence 02467778888999888877732 2345 57899999999886 566677663
No 19
>4hqo_A Sporozoite surface protein 2; malaria, gliding motility, VWA domain, TSR domain, extensibl ribbon, receptor on sporozoite, vaccine target; HET: FUC BGC; 2.19A {Plasmodium vivax} PDB: 4hql_A* 4hqn_A*
Probab=98.25 E-value=8e-06 Score=86.96 Aligned_cols=166 Identities=10% Similarity=0.012 Sum_probs=109.2
Q ss_pred CCcEEEEEEEccHhHHhhchHHHHHHHHHHHHhcCCC-CCCceEEEEEEccEEEEEEcCCCCCCCceeeccCccccCCCC
Q psy14673 313 QPAMYLFLLDVSQIAAQSGYLYTVCEVLLNQLKSMPG-DRRTSIAIITYDSAVHFYSLAEGQTQPSQMILTDIDDIFLPS 391 (912)
Q Consensus 313 ~pp~~vFvID~s~~a~~~g~l~~~~~si~~~L~~lp~-~~~~~VglITfd~~V~~y~l~~~~~~~~~~vv~dl~d~f~p~ 391 (912)
.+.-++||||.|...-...+.+.++++++..++.+.- ....+||||+|++.+...- |+
T Consensus 17 ~~~DivfvlD~SgSM~~~~~~~~~k~~~~~lv~~l~~~~~~~rvglv~Fs~~~~~~~---------------------~l 75 (266)
T 4hqo_A 17 EQVDLYLLVDGSGSIGYPNWITKVIPMLNGLINSLSLSRDTINLYMNLFGSYTTELI---------------------RL 75 (266)
T ss_dssp CCEEEEEEEECSTTTCHHHHHHTHHHHHHHHHHTCCBCTTSEEEEEEEESSSEEEEE---------------------CT
T ss_pred CceeEEEEEECCCCcChhHHHHHHHHHHHHHHHHcccCCCCcEEEEEEecCCcceEE---------------------ec
Confidence 3677999999998654344435788899999988862 1346999999998755310 10
Q ss_pred CCCcccchhHhHHHHHHHHHhCCccccCCCCCCCcHHHHHHHHHHhhcCCCC------EEEEEecCCCCCCCCcccCCCC
Q psy14673 392 PENILVNLSECYDMIVDLLKQLPGKFKDSLDSGSALGPALQAAFKLLQPTGG------RITIFQTCLPNRGPGALQSREN 465 (912)
Q Consensus 392 ~~~~lv~l~e~~~~i~~lL~~L~~~~~~~~~~~~~~G~AL~~A~~ll~~~GG------rI~~f~~g~pt~GpG~l~~~~~ 465 (912)
. .+ ....++.+...|+.|... ......+.+|.||..|..++...|+ .||++++|.++-+
T Consensus 76 ~-~~---~~~~~~~~~~~i~~l~~~--~~~~G~T~~~~AL~~a~~~l~~~~~r~~~~~~iIllTDG~~~d~--------- 140 (266)
T 4hqo_A 76 G-SG---QSIDKRQALSKVTELRKT--YTPYGTTSMTAALDEVQKHLNDRVNREKAIQLVILMTDGVPNSK--------- 140 (266)
T ss_dssp T-SH---HHHCHHHHHHHHHHHHHH--CCCCSCCCHHHHHHHHHHHHHTTCSCTTSEEEEEEEECSCCSCH---------
T ss_pred C-CC---CccCHHHHHHHHHHhhhc--cCCCCCCCHHHHHHHHHHHHhhccccCCCCeEEEEEccCCCCCc---------
Confidence 0 00 011244555666666411 0124478999999999999876543 5888888876510
Q ss_pred CCCCCCCCCCCCCchHHHHHHHHHHHhhCCcEEEEEEecCCccChhhhcccccCC--Cc--eEEecCCCC
Q psy14673 466 PNQRSNDDPPHMNPATDFYKKIALECTSFYIAVDLFILNSQYVDLATLSGVSKFS--SG--CIHHIPLYS 531 (912)
Q Consensus 466 ~~~~~~~~~~~~~~~~~fY~~La~~~~~~~isvdlf~~s~~~~~l~~l~~l~~~T--GG--~v~~~~~f~ 531 (912)
.-..+.+.++.+.||.|-.+.+.. ..+-..|..++... || .+|++.+|+
T Consensus 141 ----------------~~~~~~a~~l~~~gi~i~~iGiG~-~~~~~~L~~iA~~~~~~g~~~~~~~~d~~ 193 (266)
T 4hqo_A 141 ----------------YRALEVANKLKQRNVRLAVIGIGQ-GINHQFNRLIAGCRPREPNCKFYSYADWN 193 (266)
T ss_dssp ----------------HHHHHHHHHHHHTTCEEEEEECSS-SCCHHHHHHHHTCCTTCSSCTTEECSCHH
T ss_pred ----------------hHHHHHHHHHHHCCCEEEEEecCc-ccCHHHHHHhhCCCCCCCCCCeEEecCHH
Confidence 123567788888998777776654 46777778888764 43 777777654
No 20
>1mf7_A Integrin alpha M; cell adhesion; 1.25A {Homo sapiens} SCOP: c.62.1.1 PDB: 1na5_A 1jlm_A 1ido_A 1m1u_A 3q3g_G 1n9z_A 1bhq_1 1bho_1 1idn_1 3qa3_G
Probab=98.24 E-value=6.3e-06 Score=83.15 Aligned_cols=161 Identities=10% Similarity=0.157 Sum_probs=105.9
Q ss_pred CCcEEEEEEEccHhHHhhchHHHHHHHHHHHHhcCCCCCCceEEEEEEccEEEEE-EcCCCCCCCceeeccCccccCCCC
Q psy14673 313 QPAMYLFLLDVSQIAAQSGYLYTVCEVLLNQLKSMPGDRRTSIAIITYDSAVHFY-SLAEGQTQPSQMILTDIDDIFLPS 391 (912)
Q Consensus 313 ~pp~~vFvID~s~~a~~~g~l~~~~~si~~~L~~lp~~~~~~VglITfd~~V~~y-~l~~~~~~~~~~vv~dl~d~f~p~ 391 (912)
.+.-.+||||+|..... .-++.+++.++..++.+. ..+.+||+|+|++.++.. .+. +.
T Consensus 4 ~~~div~vlD~SgSm~~-~~~~~~k~~~~~~~~~l~-~~~~~v~vv~f~~~~~~~~~l~------------~~------- 62 (194)
T 1mf7_A 4 EDSDIAFLIDGSGSIIP-HDFRRMKEFVSTVMEQLK-KSKTLFSLMQYSEEFRIHFTFK------------EF------- 62 (194)
T ss_dssp CCEEEEEEEECCTTSCH-HHHHHHHHHHHHHHHHHC-CTTEEEEEEEESSSEEEEECHH------------HH-------
T ss_pred CCeeEEEEEeCCCCCCH-HHHHHHHHHHHHHHHhcC-CCCeEEEEEEecCCceEEEecC------------Cc-------
Confidence 46778999999976332 236778888888888775 334599999999876531 110 00
Q ss_pred CCCcccchhHhHHHHHHHHHhCCccccCCCCCCCcHHHHHHHHHH-hhcC-CC------CEEEEEecCCCCCCCCcccCC
Q psy14673 392 PENILVNLSECYDMIVDLLKQLPGKFKDSLDSGSALGPALQAAFK-LLQP-TG------GRITIFQTCLPNRGPGALQSR 463 (912)
Q Consensus 392 ~~~~lv~l~e~~~~i~~lL~~L~~~~~~~~~~~~~~G~AL~~A~~-ll~~-~G------GrI~~f~~g~pt~GpG~l~~~ 463 (912)
..++.+...|+.|.. ....+.+|.||..|.. ++.. .| ..|+++++|.++..+-.
T Consensus 63 ---------~~~~~~~~~i~~l~~-----~~g~T~~~~aL~~a~~~l~~~~~~~r~~~~~~iillTDG~~~~d~~~---- 124 (194)
T 1mf7_A 63 ---------QNNPNPRSLVKPITQ-----LLGRTHTATGIRKVVRELFNITNGARKNAFKILVVITDGEKFGDPLG---- 124 (194)
T ss_dssp ---------HHSCCHHHHHTTCCC-----CCSCBCHHHHHHHHHHTTTSGGGTCCTTSEEEEEEEESSCCBSCSSC----
T ss_pred ---------CCHHHHHHHHHhCcC-----CCCCchHHHHHHHHHHHhcCcccCCCCCCCeEEEEEcCCCCCCCchh----
Confidence 011234455666642 2357899999999996 4432 23 24888999988711100
Q ss_pred CCCCCCCCCCCCCCCchHHHHHHHHHHHhhCCcEEEEEEecCCc---cChhhhcccccCC-CceEEecCCCCC
Q psy14673 464 ENPNQRSNDDPPHMNPATDFYKKIALECTSFYIAVDLFILNSQY---VDLATLSGVSKFS-SGCIHHIPLYSG 532 (912)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~fY~~La~~~~~~~isvdlf~~s~~~---~~l~~l~~l~~~T-GG~v~~~~~f~~ 532 (912)
+.+.+.++.+.||.|..+.+..+. .+..+|..++..+ +|.+|..++|..
T Consensus 125 --------------------~~~~~~~~~~~gi~v~~igvG~~~~~~~~~~~L~~iA~~~~~~~~~~~~~~~~ 177 (194)
T 1mf7_A 125 --------------------YEDVIPEADREGVIRYVIGVGDAFRSEKSRQELNTIASKPPRDHVFQVNNFEA 177 (194)
T ss_dssp --------------------GGGTHHHHHHTTEEEEEEEESGGGCSHHHHHHHHHHSCSSHHHHEEEESSGGG
T ss_pred --------------------hHHHHHHHHHCCCEEEEEEecccccccccHHHHHHHhCCCCcccEEEeCCHHH
Confidence 123456677889888777775542 1378899999986 588888888764
No 21
>2b2x_A Integrin alpha-1; computational design, antibody-antigen complex, immune syste; 2.20A {Rattus norvegicus} SCOP: c.62.1.1
Probab=98.23 E-value=1.8e-05 Score=81.73 Aligned_cols=161 Identities=12% Similarity=0.108 Sum_probs=107.9
Q ss_pred CCcEEEEEEEccHhHHhhchHHHHHHHHHHHHhcCCC-CCCceEEEEEEccEEEEEEcCCCCCCCceeeccCccccCCCC
Q psy14673 313 QPAMYLFLLDVSQIAAQSGYLYTVCEVLLNQLKSMPG-DRRTSIAIITYDSAVHFYSLAEGQTQPSQMILTDIDDIFLPS 391 (912)
Q Consensus 313 ~pp~~vFvID~s~~a~~~g~l~~~~~si~~~L~~lp~-~~~~~VglITfd~~V~~y~l~~~~~~~~~~vv~dl~d~f~p~ 391 (912)
.+.-.+||||+|.... -++.+++.+...++.+.. ....+||+|+|++.++..- ++.+
T Consensus 21 ~~~div~vlD~SgSM~---~~~~~k~~~~~~~~~l~~~~~~~rv~lv~F~~~~~~~~--------------~l~~----- 78 (223)
T 2b2x_A 21 TQLDIVIVLDGSNSIY---PWESVIAFLNDLLKRMDIGPKQTQVGIVQYGENVTHEF--------------NLNK----- 78 (223)
T ss_dssp -CEEEEEEEECSTTCC---CHHHHHHHHHHHHTTSCCSTTSCCEEEEEESSSEEEEE--------------CTTT-----
T ss_pred CcceEEEEEECCCChh---hHHHHHHHHHHHHHhcccCCCCeEEEEEEeCCCccEEE--------------ecCC-----
Confidence 4577899999998643 278899999999988852 2345999999998765420 0000
Q ss_pred CCCcccchhHhHHHHHHHHHhCCccccCCCCCCCcHHHHHHHHHHh-hcC-----CC--CEEEEEecCCCCCCCCcccCC
Q psy14673 392 PENILVNLSECYDMIVDLLKQLPGKFKDSLDSGSALGPALQAAFKL-LQP-----TG--GRITIFQTCLPNRGPGALQSR 463 (912)
Q Consensus 392 ~~~~lv~l~e~~~~i~~lL~~L~~~~~~~~~~~~~~G~AL~~A~~l-l~~-----~G--GrI~~f~~g~pt~GpG~l~~~ 463 (912)
+ ..++.+.+.|+.|.. .....+.+|.||..|... +.. .+ ..|+++++|.++.|.
T Consensus 79 ---~-----~~~~~~~~~i~~l~~----~gG~~T~~~~aL~~a~~~l~~~~~~~~~~~~~~iillTDG~~~~~~------ 140 (223)
T 2b2x_A 79 ---Y-----SSTEEVLVAANKIVQ----RGGRQTMTALGIDTARKEAFTEARGARRGVKKVMVIVTDGESHDNY------ 140 (223)
T ss_dssp ---C-----CSHHHHHHHHTTCCC----CCCSSCCHHHHHHHHHHTTSSGGGTCCTTSEEEEEEEESSCCTTGG------
T ss_pred ---C-----CCHHHHHHHHHhhhc----cCCCCccHHHHHHHHHHHhcCcccCCCCCCCeEEEEEcCCCCCCCc------
Confidence 0 012334445555531 111248899999999986 442 11 358888998877541
Q ss_pred CCCCCCCCCCCCCCCchHHHHHHHHHHHhhCCcEEEEEEecCCcc--------ChhhhcccccC-CCceEEecCCCCC
Q psy14673 464 ENPNQRSNDDPPHMNPATDFYKKIALECTSFYIAVDLFILNSQYV--------DLATLSGVSKF-SSGCIHHIPLYSG 532 (912)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~fY~~La~~~~~~~isvdlf~~s~~~~--------~l~~l~~l~~~-TGG~v~~~~~f~~ 532 (912)
-+.+.+..+.+.||.|..+.+..+.- ...+|..++.. |||.+|...++..
T Consensus 141 -------------------~~~~~~~~~~~~gi~v~~igvG~~~~~~~~~~~~~~~~L~~iA~~p~~g~~~~~~~~~~ 199 (223)
T 2b2x_A 141 -------------------RLKQVIQDCEDENIQRFSIAILGHYNRGNLSTEKFVEEIKSIASEPTEKHFFNVSDELA 199 (223)
T ss_dssp -------------------GHHHHHHHHHTTTEEEEEEEECGGGC---CCCHHHHHHHHTTSCSSGGGTEEEESSTTG
T ss_pred -------------------cHHHHHHHHHHCCCEEEEEEecCccccccccchhHHHHHHHHhCCCchhcEEEeCCHHH
Confidence 03567778888999888877754321 04789999998 9999999887764
No 22
>2x31_A Magnesium-chelatase 60 kDa subunit; ligase, bacteriochlorophyll biosynthesis, photosynthesis; 7.50A {Rhodobacter capsulatus}
Probab=98.15 E-value=1.5e-07 Score=94.66 Aligned_cols=176 Identities=15% Similarity=0.193 Sum_probs=105.5
Q ss_pred CCcEEEEEEEccHhHHhhchHHHHHHHHHHHHhcC-CCCCCceEEEEEEcc-EEEEEEcCCCCCCCceeeccCccccCCC
Q psy14673 313 QPAMYLFLLDVSQIAAQSGYLYTVCEVLLNQLKSM-PGDRRTSIAIITYDS-AVHFYSLAEGQTQPSQMILTDIDDIFLP 390 (912)
Q Consensus 313 ~pp~~vFvID~s~~a~~~g~l~~~~~si~~~L~~l-p~~~~~~VglITfd~-~V~~y~l~~~~~~~~~~vv~dl~d~f~p 390 (912)
.|..++||||+|.... ...++.+++++...++.+ +.+. +||||+|++ ... ..+|
T Consensus 4 ~~~~vv~vlD~SgSM~-~~~~~~~k~~~~~~~~~~~~~~~--~v~lv~f~~~~~~---------------------~~~~ 59 (189)
T 2x31_A 4 SDRVLIFAVDASGSAA-VARLSEAKGAVELLLGRAYAARD--HVSLITFRGTAAQ---------------------VLLQ 59 (189)
T ss_dssp SCCEEEEEEECCTTSC-C--CHHHHHHHHHHHHHSCTTTS--CCCEEEESBSCCC---------------------BCTT
T ss_pred CCeEEEEEEECCCCCC-chHHHHHHHHHHHHHHHhcCCCc--EEEEEEECCCCce---------------------EecC
Confidence 5678999999998642 235778889999988776 5544 899999986 210 1122
Q ss_pred CCCCcccchhHhHHHHHHHHHhCCccccCCCCCCCcHHHHHHHHHHhhcCC-----CCEEEEEecCCCCCCCCcccCCCC
Q psy14673 391 SPENILVNLSECYDMIVDLLKQLPGKFKDSLDSGSALGPALQAAFKLLQPT-----GGRITIFQTCLPNRGPGALQSREN 465 (912)
Q Consensus 391 ~~~~~lv~l~e~~~~i~~lL~~L~~~~~~~~~~~~~~G~AL~~A~~ll~~~-----GGrI~~f~~g~pt~GpG~l~~~~~ 465 (912)
.. ...+.+...|+.|.. ...+.++.||..|..++... ...|+++++|.++.|.+.-..+++
T Consensus 60 ~~--------~~~~~~~~~i~~l~~------~g~T~~~~al~~a~~~l~~~~~~~~~~~ivliTDG~~~~~~~~~~~~~~ 125 (189)
T 2x31_A 60 PS--------RSLTQTKRQLQGLPG------GGGTPLASGMEMAMVTAKQARSRGMTPTIALLTDGRGNIALDGTANREL 125 (189)
T ss_dssp TC--------SCHHHHHHHHHHCCC------CBCCCCHHHHHHHHHHHHTCTTTCSSEEEEECCBSCCSSCCTHHHHHGG
T ss_pred CC--------CCHHHHHHHHhcCCC------CCCCCHHHHHHHHHHHHHhccCCCCceEEEEECCCCCCCCCCccccccc
Confidence 11 124456667777742 35688999999999988652 358889999999987531000000
Q ss_pred CCCCCCCCCCCCCchHHHHHHHHHHHhhCCcEEEEEEecCCccChhhhcccccCCCceEEecCCCCCCCchhHHHHHHHH
Q psy14673 466 PNQRSNDDPPHMNPATDFYKKIALECTSFYIAVDLFILNSQYVDLATLSGVSKFSSGCIHHIPLYSGKNMSHVYQLDRMF 545 (912)
Q Consensus 466 ~~~~~~~~~~~~~~~~~fY~~La~~~~~~~isvdlf~~s~~~~~l~~l~~l~~~TGG~v~~~~~f~~~~~~~~~~~~~~l 545 (912)
.. .+. .+++..+.+.||.|..+.+... +...|..++..|||..++.++ ...+.|.+.+
T Consensus 126 ~~----~~~----------~~~~~~~~~~gi~v~~ig~g~~--~~~~L~~iA~~~~G~~~~~~~------~~~~~~~~~~ 183 (189)
T 2x31_A 126 AG----EQA----------TKVARAIRASGMPAVIIDTAMR--PNPALVDLARTMDAHYIALPR------ATAHKMADVL 183 (189)
T ss_dssp GT----CCC----------EEEEECTGGGGSCCTHHHHHHS--SCSSSCSTTTEEEESSTTTHH------HHHHHHHHHH
T ss_pred hh----HHH----------HHHHHHHHHcCCeEEEEecCCC--CHHHHHHHHHhcCCeEEECCC------cchHHHHHHH
Confidence 00 000 0111122334443333333322 677899999999998765532 2235565555
Q ss_pred HHh
Q psy14673 546 SRY 548 (912)
Q Consensus 546 ~~~ 548 (912)
.+.
T Consensus 184 ~~~ 186 (189)
T 2x31_A 184 GAA 186 (189)
T ss_dssp HHC
T ss_pred HHh
Confidence 543
No 23
>1pt6_A Integrin alpha-1; cell adhesion; 1.87A {Homo sapiens} SCOP: c.62.1.1 PDB: 4a0q_A 1qcy_A 1qc5_A 1qc5_B 1ck4_A 1mhp_A
Probab=98.14 E-value=3.1e-05 Score=79.35 Aligned_cols=161 Identities=14% Similarity=0.134 Sum_probs=107.5
Q ss_pred CCcEEEEEEEccHhHHhhchHHHHHHHHHHHHhcCC-CCCCceEEEEEEccEEEEEEcCCCCCCCceeeccCccccCCCC
Q psy14673 313 QPAMYLFLLDVSQIAAQSGYLYTVCEVLLNQLKSMP-GDRRTSIAIITYDSAVHFYSLAEGQTQPSQMILTDIDDIFLPS 391 (912)
Q Consensus 313 ~pp~~vFvID~s~~a~~~g~l~~~~~si~~~L~~lp-~~~~~~VglITfd~~V~~y~l~~~~~~~~~~vv~dl~d~f~p~ 391 (912)
.+.-.+||||+|.... -++.+++.++..++.+. ...+.+||+|+|++.++..- |+
T Consensus 6 ~~~div~vlD~SgSm~---~~~~~k~~~~~~~~~l~~~~~~~~v~lv~F~~~~~~~~---------------------~l 61 (213)
T 1pt6_A 6 TQLDIVIVLDGSNSIY---PWDSVTAFLNDLLKRMDIGPKQTQVGIVQYGENVTHEF---------------------NL 61 (213)
T ss_dssp -CEEEEEEEECCTTCC---CHHHHHHHHHHHHTTSCBSTTSBEEEEEEESSSEEEEE---------------------CT
T ss_pred CCccEEEEEECCCChh---hHHHHHHHHHHHHHhcCCCCCCeEEEEEEeCCCccEEE---------------------ec
Confidence 4678999999998643 27888999999998875 22346999999998765420 11
Q ss_pred CCCcccchhHhHHHHHHHHHhCCccccCCCCCCCcHHHHHHHHHHh-hcC-----CC--CEEEEEecCCCCCCCCcccCC
Q psy14673 392 PENILVNLSECYDMIVDLLKQLPGKFKDSLDSGSALGPALQAAFKL-LQP-----TG--GRITIFQTCLPNRGPGALQSR 463 (912)
Q Consensus 392 ~~~~lv~l~e~~~~i~~lL~~L~~~~~~~~~~~~~~G~AL~~A~~l-l~~-----~G--GrI~~f~~g~pt~GpG~l~~~ 463 (912)
.++ ..++.+.+.|+.|.. .....+.+|.||..|... +.. .+ ..|+++++|.++.|.
T Consensus 62 -~~~-----~~~~~~~~~i~~l~~----~~G~~T~~~~aL~~a~~~l~~~~~~~r~~~~~~iillTDG~~~~~~------ 125 (213)
T 1pt6_A 62 -NKY-----SSTEEVLVAAKKIVQ----RGGRQTMTALGTDTARKEAFTEARGARRGVKKVMVIVTDGESHDNH------ 125 (213)
T ss_dssp -TTC-----SSHHHHHHHHHTCCC----CCCSSCCHHHHHHHHHHTTTSGGGTCCTTCEEEEEEEESSCCSCSH------
T ss_pred -ccc-----CCHHHHHHHHHhccC----CCCCcccHHHHHHHHHHHhcCcccCCCCCCCeEEEEEcCCCCCCCc------
Confidence 000 123334455666642 112247899999999986 442 11 348888998876541
Q ss_pred CCCCCCCCCCCCCCCchHHHHHHHHHHHhhCCcEEEEEEecCCc----cC----hhhhcccccC-CCceEEecCCCCC
Q psy14673 464 ENPNQRSNDDPPHMNPATDFYKKIALECTSFYIAVDLFILNSQY----VD----LATLSGVSKF-SSGCIHHIPLYSG 532 (912)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~fY~~La~~~~~~~isvdlf~~s~~~----~~----l~~l~~l~~~-TGG~v~~~~~f~~ 532 (912)
-+.+.+.++.+.||.|..+.+..+. .+ ..+|..++.. |||.+|..+++..
T Consensus 126 -------------------~~~~~~~~~~~~gi~i~~igig~~~~~~~~~~~~~~~~L~~iA~~~~~g~~~~~~~~~~ 184 (213)
T 1pt6_A 126 -------------------RLKKVIQDCEDENIQRFSIAILGSYNRGNLSTEKFVEEIKSIASEPTEKHFFNVSDELA 184 (213)
T ss_dssp -------------------HHHHHHHHHHHTTEEEEEEEECHHHHHTTCCCHHHHHHHHHHSCSSHHHHEEEESSGGG
T ss_pred -------------------cHHHHHHHHHHCCCEEEEEEeccccccccccchhhHHHHHHHhCCCchhcEEEeCCHHH
Confidence 1356777888899888777765431 11 3789999998 7899999887764
No 24
>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP: b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A
Probab=98.12 E-value=4.4e-05 Score=88.77 Aligned_cols=168 Identities=17% Similarity=0.228 Sum_probs=108.0
Q ss_pred cEEEEEEEccHhHHhhchHHHHHHHHHHHHhcCCC-CCCceEEEEEEccEEEEEEcCCCCCCCceeeccCccccCCCCCC
Q psy14673 315 AMYLFLLDVSQIAAQSGYLYTVCEVLLNQLKSMPG-DRRTSIAIITYDSAVHFYSLAEGQTQPSQMILTDIDDIFLPSPE 393 (912)
Q Consensus 315 p~~vFvID~s~~a~~~g~l~~~~~si~~~L~~lp~-~~~~~VglITfd~~V~~y~l~~~~~~~~~~vv~dl~d~f~p~~~ 393 (912)
.-++||||+|...-. ..++.++++++..++.++. ..+.+||||+|++..++.- ++.+
T Consensus 2 ~div~vlD~SgSM~~-~~~~~~k~~~~~~~~~l~~~~~~~~v~lv~f~~~~~~~~--------------~~~~------- 59 (497)
T 1rrk_A 2 MNIYLVLDGSDSIGA-SNFTGAKKVLVNLIEKVASYGVKPRYGLVTYATYPKIWV--------------KVSE------- 59 (497)
T ss_dssp EEEEEEEECSTTTCH-HHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESSSEEEEE--------------CTTS-------
T ss_pred eeEEEEEECCCCcch-hhHHHHHHHHHHHHHHhhccCCCceEEEEEecCCceEee--------------cccc-------
Confidence 458999999976432 3477888888888876543 2235999999998765421 1111
Q ss_pred CcccchhHhHHHHHHHHHhCCccccCCCCCCCcHHHHHHHHHHhhcC-----------CCCEEEEEecCCCCCCCCcccC
Q psy14673 394 NILVNLSECYDMIVDLLKQLPGKFKDSLDSGSALGPALQAAFKLLQP-----------TGGRITIFQTCLPNRGPGALQS 462 (912)
Q Consensus 394 ~~lv~l~e~~~~i~~lL~~L~~~~~~~~~~~~~~G~AL~~A~~ll~~-----------~GGrI~~f~~g~pt~GpG~l~~ 462 (912)
+....++.+.+.|+.|.... ......+.+|.||..|..++.. ....|+++++|.++.|....
T Consensus 60 ----~~~~~~~~~~~~l~~l~~~~-~~~~g~T~~~~al~~a~~~l~~~~~~~~~~~~~~~~~iillTDG~~~~g~~~~-- 132 (497)
T 1rrk_A 60 ----ADSSNADWVTKQLNEINYED-HKLKSGTNTKKALQAVYSMMSWPDDVPPEGWNRTRHVIILMTDGLHNMGGDPI-- 132 (497)
T ss_dssp ----GGGGCHHHHHHHHHHCCGGG-SCCTTCCCHHHHHHHHHHHHCCC------CGGGCEEEEEEEECSCCCSSSCTH--
T ss_pred ----ccccCHHHHHHHHHhCcCcc-ccccCccCHHHHHHHHHHHhhhhhccccccccccceEEEEEeCCCcccCCChh--
Confidence 12233566778888886321 1134578999999999999842 22468889999988864110
Q ss_pred CCCCCCCCCCCCCCCCchHHHHHHHHH---------HHhhCCcEEEEEEecCCccChhhhcccccCCCc--eEEecCCCC
Q psy14673 463 RENPNQRSNDDPPHMNPATDFYKKIAL---------ECTSFYIAVDLFILNSQYVDLATLSGVSKFSSG--CIHHIPLYS 531 (912)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~fY~~La~---------~~~~~~isvdlf~~s~~~~~l~~l~~l~~~TGG--~v~~~~~f~ 531 (912)
...+.+.. .+.+.||.|..+.+. +.+|..+|..+|..+|| .++..++++
T Consensus 133 -------------------~~~~~~~~~~~~~~~~~~~~~~~i~v~~igvG-~~~~~~~L~~iA~~~~g~~~~~~~~~~~ 192 (497)
T 1rrk_A 133 -------------------TVIDEIRDLLYIGKDRKNPREDYLDVYVFGVG-PLVNQVNINALASKKDNEQHVCKVKDME 192 (497)
T ss_dssp -------------------HHHHHHHHHTTCSSCC-CCCGGGEEEEEEECS-SSCCHHHHHHHSCCCTTCCCEEETTCHH
T ss_pred -------------------HHHHHHHHHhhhhcccccchhcCeeEEEecCC-CccCHHHHHHHhcCCCCcceEEEeCCHH
Confidence 11111111 122337766666554 34788999999999999 887776554
No 25
>2odp_A Complement C2; C3/C5 convertase, complement serin protease, human complement system, glycoprotein, SP, VWFA,; HET: NAG; 1.90A {Homo sapiens} PDB: 2odq_A* 2i6q_A* 2i6s_A*
Probab=98.11 E-value=2.6e-05 Score=91.04 Aligned_cols=167 Identities=17% Similarity=0.139 Sum_probs=111.6
Q ss_pred CCCCcEEEEEEEccHhHHhhchHHHHHHHHHHHHhcC---CCCCCceEEEEEEccEEEEEEcCCCCCCCceeeccCcccc
Q psy14673 311 PPQPAMYLFLLDVSQIAAQSGYLYTVCEVLLNQLKSM---PGDRRTSIAIITYDSAVHFYSLAEGQTQPSQMILTDIDDI 387 (912)
Q Consensus 311 ~~~pp~~vFvID~s~~a~~~g~l~~~~~si~~~L~~l---p~~~~~~VglITfd~~V~~y~l~~~~~~~~~~vv~dl~d~ 387 (912)
+..+.-++||||+|.+.... -++.++++++..++.| +.+ .+||||+|++.+++.-
T Consensus 6 ~~~~~divfvlD~SgSM~~~-~~~~~k~~~~~l~~~l~~~~~~--~rv~lv~f~~~~~~~~------------------- 63 (509)
T 2odp_A 6 RSGHLNLYLLLDASQSVSEN-DFLIFKESASLMVDRIFSFEIN--VSVAIITFASEPKVLM------------------- 63 (509)
T ss_dssp SSSEEEEEEEEECSTTSCHH-HHHHHHHHHHHHHHHHHTTCCC--EEEEEEEESSSEEEEE-------------------
T ss_pred CCCCeeEEEEEeCCCccchh-hHHHHHHHHHHHHHHhhccCCC--ceEEEEEccCCCceeE-------------------
Confidence 34577899999999764332 3678889999988877 444 4999999998765421
Q ss_pred CCCCCCCcccchhHhHHHHHHHHHhCCccccCCCCCCCcHHHHHHHHHHhhcCC----C----------CEEEEEecCCC
Q psy14673 388 FLPSPENILVNLSECYDMIVDLLKQLPGKFKDSLDSGSALGPALQAAFKLLQPT----G----------GRITIFQTCLP 453 (912)
Q Consensus 388 f~p~~~~~lv~l~e~~~~i~~lL~~L~~~~~~~~~~~~~~G~AL~~A~~ll~~~----G----------GrI~~f~~g~p 453 (912)
|+.. .....++.+...|+.|..... .....+.+|.||..|..+|+.. | ..|+++++|.+
T Consensus 64 --~l~~----~~~~~~~~~~~~l~~l~~~~~-~~~ggT~~~~aL~~a~~~l~~~~~~~~~~~~~~~~~~~~iillTDG~~ 136 (509)
T 2odp_A 64 --SVLN----DNSRDMTEVISSLENANYKDH-ENGTGTNTYAALNSVYLMMNNQMRLLGMETMAWQEIRHAIILLTDGKS 136 (509)
T ss_dssp --CTTS----GGGGCHHHHHHHHHTCCGGGG-TTCCSCCHHHHHHHHHHHHHHHHHHHCTTSHHHHTEEEEEEEESCSCC
T ss_pred --eccC----CCCCCHHHHHHHHHhcccccC-CCCCCccHHHHHHHHHHHHhhcccccccccccccccceEEEEECCCCc
Confidence 0000 011235566777888863211 1146789999999999988431 1 35799999988
Q ss_pred CCCCCcccCCCCCCCCCCCCCCCCCchHHHHHHHHHHHh---------hCCcEEEEEEecCCccChhhhcccccCCCce-
Q psy14673 454 NRGPGALQSRENPNQRSNDDPPHMNPATDFYKKIALECT---------SFYIAVDLFILNSQYVDLATLSGVSKFSSGC- 523 (912)
Q Consensus 454 t~GpG~l~~~~~~~~~~~~~~~~~~~~~~fY~~La~~~~---------~~~isvdlf~~s~~~~~l~~l~~l~~~TGG~- 523 (912)
+.|. .. ..++..+. +.||.|..+.+..+..|..+|..+|..+||.
T Consensus 137 ~~~~-~~------------------------~~~~~~~~~~~~~~~~~~~~i~i~~iGvG~~~~~~~~L~~iA~~~~G~~ 191 (509)
T 2odp_A 137 NMGG-SP------------------------KTAVDHIREILNINQKRNDYLDIYAIGVGKLDVDWRELNELGSKKDGER 191 (509)
T ss_dssp CSSS-CT------------------------HHHHHHHHHHTTCCSTTGGGEEEEEEEESSSCCCHHHHHHHSCCCTTCC
T ss_pred cCCC-Ch------------------------hHHHHHHHHHhhccccccCceEEEEEEcCCCcccHHHHHhhccCCCCce
Confidence 8761 10 11222222 6677777777665558999999999999998
Q ss_pred -EEecCCCC
Q psy14673 524 -IHHIPLYS 531 (912)
Q Consensus 524 -v~~~~~f~ 531 (912)
+++.++++
T Consensus 192 ~~~~~~~~~ 200 (509)
T 2odp_A 192 HAFILQDTK 200 (509)
T ss_dssp CEEEESSHH
T ss_pred eeEEecCHH
Confidence 66665543
No 26
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=98.10 E-value=1.2e-05 Score=80.95 Aligned_cols=141 Identities=16% Similarity=0.183 Sum_probs=93.6
Q ss_pred EEEEEEEccHhHHhhc----hHHHHHHHHHHHH----hcCCCCCCceEEEEEEccE-EEEEEcCCCCCCCceeeccCccc
Q psy14673 316 MYLFLLDVSQIAAQSG----YLYTVCEVLLNQL----KSMPGDRRTSIAIITYDSA-VHFYSLAEGQTQPSQMILTDIDD 386 (912)
Q Consensus 316 ~~vFvID~s~~a~~~g----~l~~~~~si~~~L----~~lp~~~~~~VglITfd~~-V~~y~l~~~~~~~~~~vv~dl~d 386 (912)
..+|+||+|....... .++..++++...+ +.-|++ +||||+|+.. .++
T Consensus 4 ~lvlvlD~S~SM~~~D~~psRl~~ak~~~~~~~~~~~~~~~~d---~vGLV~fa~~~a~~-------------------- 60 (192)
T 2x5n_A 4 ATMILIDNSEWMINGDYIPTRFEAQKDTVHMIFNQKINDNPEN---MCGLMTIGDNSPQV-------------------- 60 (192)
T ss_dssp EEEEEECCSGGGGCTTSSSCHHHHHHHHHHHHHHHHHHHCTTC---EEEEEECCTTSCCE--------------------
T ss_pred EEEEEEECCHhhccCCCCCCHHHHHHHHHHHHHHHHHhcCCCC---eEEEEEEcCCCcEE--------------------
Confidence 5799999998755322 4677777666544 334543 8999999752 211
Q ss_pred cCCCCCCCcccchhHhHHHHHHHHHhCCccccCCCCCCCcHHHHHHHHHHhhcCC-----CCEEEEEecCCCCCCCCccc
Q psy14673 387 IFLPSPENILVNLSECYDMIVDLLKQLPGKFKDSLDSGSALGPALQAAFKLLQPT-----GGRITIFQTCLPNRGPGALQ 461 (912)
Q Consensus 387 ~f~p~~~~~lv~l~e~~~~i~~lL~~L~~~~~~~~~~~~~~G~AL~~A~~ll~~~-----GGrI~~f~~g~pt~GpG~l~ 461 (912)
++++......|..+|+.+.. ...+++|.||..|..+|+.. +.||++|+++.-+.
T Consensus 61 ---------~~plT~d~~~i~~~L~~l~~------~g~t~l~~aL~~A~~~l~~~~~~~~~~riiil~~~~~~~------ 119 (192)
T 2x5n_A 61 ---------LSTLTRDYGKFLSAMHDLPV------RGNAKFGDGIQIAQLALKHRENKIQRQRIVAFVGSPIVE------ 119 (192)
T ss_dssp ---------EEEEESCHHHHHHHHTTCCC------CSCCCHHHHHHHHHHHHHTCSCTTSEEEEEEEECSCCSS------
T ss_pred ---------ecCCCCCHHHHHHHHHcCCC------CCCchHHHHHHHHHHHHHhccccCCCceEEEEEECCCCC------
Confidence 11122235667777777642 24689999999999999763 35788888763211
Q ss_pred CCCCCCCCCCCCCCCCCchHHHHHHHHHHHhhCCcEEEEEEecCCccChhhhcccccC
Q psy14673 462 SRENPNQRSNDDPPHMNPATDFYKKIALECTSFYIAVDLFILNSQYVDLATLSGVSKF 519 (912)
Q Consensus 462 ~~~~~~~~~~~~~~~~~~~~~fY~~La~~~~~~~isvdlf~~s~~~~~l~~l~~l~~~ 519 (912)
...-..++++.+.+.||.|+++.++.+.-+-. |..+++.
T Consensus 120 ------------------~~~~~~~~a~~lk~~gi~v~~Ig~G~~~~~~~-l~~la~~ 158 (192)
T 2x5n_A 120 ------------------DEKNLIRLAKRMKKNNVAIDIIHIGELQNESA-LQHFIDA 158 (192)
T ss_dssp ------------------CHHHHHHHHHHHHHTTEEEEEEEESCC---CH-HHHHHHH
T ss_pred ------------------CchhHHHHHHHHHHCCCEEEEEEeCCCCccHH-HHHHHHh
Confidence 01224688999999999999999987765545 7777766
No 27
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=98.06 E-value=4.9e-07 Score=110.34 Aligned_cols=14 Identities=0% Similarity=0.102 Sum_probs=0.0
Q ss_pred ccCCCCCChhHHHH
Q psy14673 722 FRIGQSTRLDDRLF 735 (912)
Q Consensus 722 l~~~~~~s~Der~~ 735 (912)
|.+++|..||+-+|
T Consensus 600 l~GDFNs~P~s~~~ 613 (727)
T 4b8c_D 600 ICGDFNSYINSAVY 613 (727)
T ss_dssp --------------
T ss_pred EecccCCCCCCcce
Confidence 33445555555443
No 28
>1mjn_A Integrin alpha-L; rossmann fold, immune system; 1.30A {Homo sapiens} SCOP: c.62.1.1 PDB: 3hi6_A 1mq8_B* 3eoa_I 3eob_I 1rd4_A* 1lfa_A 1zon_A 1zoo_A 1zop_A 1dgq_A 1xdd_A* 1xdg_A* 1xuo_A* 3e2m_A* 3bqn_B* 1cqp_A* 3bqm_B* 2ica_A* 2o7n_A* 3m6f_A* ...
Probab=98.01 E-value=8.6e-05 Score=73.80 Aligned_cols=152 Identities=11% Similarity=0.090 Sum_probs=100.9
Q ss_pred CcEEEEEEEccHhHHhhchHHHHHHHHHHHHhcCCCCCCceEEEEEEccEEEEEEcCCCCCCCceeeccCccccCCCCCC
Q psy14673 314 PAMYLFLLDVSQIAAQSGYLYTVCEVLLNQLKSMPGDRRTSIAIITYDSAVHFYSLAEGQTQPSQMILTDIDDIFLPSPE 393 (912)
Q Consensus 314 pp~~vFvID~s~~a~~~g~l~~~~~si~~~L~~lp~~~~~~VglITfd~~V~~y~l~~~~~~~~~~vv~dl~d~f~p~~~ 393 (912)
|.-.+||||.|...-. .-++.+++.++..++.+. ..+++||+|+|++.+++. +
T Consensus 2 ~~divfvlD~S~Sm~~-~~~~~~k~~~~~~~~~l~-~~~~rv~vv~fs~~~~~~-~------------------------ 54 (179)
T 1mjn_A 2 NVDLVFLFDGSMSLQP-DEFQKILDFMKDVMKKCS-NTSYQFAAVQFSTSYKTE-F------------------------ 54 (179)
T ss_dssp CEEEEEEEECBTTCCH-HHHHHHHHHHHHHHHHTT-TSSEEEEEEEESSSEEEE-E------------------------
T ss_pred CccEEEEEeCCCCCCH-HHHHHHHHHHHHHHHHhC-CCCeEEEEEEECCceeEE-E------------------------
Confidence 4568999999975322 236788899999888883 234699999999876541 0
Q ss_pred CcccchhH--hHHHHHHHHHhCCccccCCCCCCCcHHHHHHHHHH-hhcC-CCC------EEEEEecCCCCCCCCcccCC
Q psy14673 394 NILVNLSE--CYDMIVDLLKQLPGKFKDSLDSGSALGPALQAAFK-LLQP-TGG------RITIFQTCLPNRGPGALQSR 463 (912)
Q Consensus 394 ~~lv~l~e--~~~~i~~lL~~L~~~~~~~~~~~~~~G~AL~~A~~-ll~~-~GG------rI~~f~~g~pt~GpG~l~~~ 463 (912)
++.+ .++.+..+++.|..+ ...+++|.||..|.. ++.. .|+ .|+++++|.++.|.-
T Consensus 55 ----~l~~~~~~~~~~~~~~~i~~~-----~g~T~~~~aL~~a~~~~~~~~~g~r~~~~~~iillTDG~~~~~~~----- 120 (179)
T 1mjn_A 55 ----DFSDYVKRKDPDALLKHVKHM-----LLLTNTFGAINYVATEVFREELGARPDATKVLIIITDGEATDSGN----- 120 (179)
T ss_dssp ----CHHHHHHHCCHHHHHTTCCCC-----CBCCCHHHHHHHHHHHTSSGGGTCCTTSEEEEEEEESSCCSSCSC-----
T ss_pred ----cCcccCCHHHHHHHHHhcccC-----CCCChHHHHHHHHHHHhcccccCCCCCCCeEEEEEcCCCCCCCcc-----
Confidence 0111 122355667777542 247899999999985 6543 232 588899998876520
Q ss_pred CCCCCCCCCCCCCCCchHHHHHHHHHHHhhCCcEEEEEEecCCcc---ChhhhcccccCCCc-eEEecCCCCC
Q psy14673 464 ENPNQRSNDDPPHMNPATDFYKKIALECTSFYIAVDLFILNSQYV---DLATLSGVSKFSSG-CIHHIPLYSG 532 (912)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~fY~~La~~~~~~~isvdlf~~s~~~~---~l~~l~~l~~~TGG-~v~~~~~f~~ 532 (912)
.. .+.||.|-.+.+..+.- +..+|..++..+|| .+|+.++|..
T Consensus 121 ---------------~~-----------~~~~i~i~~igvG~~~~~~~~~~~L~~iA~~~~~~~~~~~~~~~~ 167 (179)
T 1mjn_A 121 ---------------ID-----------AAKDIIRYIIGIGKHFQTKESQETLHKFASKPASEFVKILDTFEK 167 (179)
T ss_dssp ---------------CG-----------GGTTSEEEEEEESGGGCSHHHHHTTGGGSCSCHHHHEEEESSGGG
T ss_pred ---------------hH-----------HHCCCEEEEEEccccccccccHHHHHHHhCCccHhcEEEeCCHHH
Confidence 00 24577666666554321 24789999999988 4788788774
No 29
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=97.92 E-value=7.7e-07 Score=108.62 Aligned_cols=11 Identities=27% Similarity=0.087 Sum_probs=0.0
Q ss_pred eEEEEEecccc
Q psy14673 626 RRIRVHTLCLP 636 (912)
Q Consensus 626 rriRV~T~~l~ 636 (912)
+.++|.|.-+.
T Consensus 547 ~~l~V~ntHL~ 557 (727)
T 4b8c_D 547 DTIWAVTTHLH 557 (727)
T ss_dssp -----------
T ss_pred ceEEEEEeccc
Confidence 34445444443
No 30
>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I* 3hs0_D* 2ok5_A* 2xwb_F*
Probab=97.78 E-value=8.7e-05 Score=90.79 Aligned_cols=181 Identities=16% Similarity=0.208 Sum_probs=111.1
Q ss_pred CCCCcEEEEEEEccHhHHhhchHHHHHHHHHHHHhcCCC-CCCceEEEEEEccEEEEEEcCCCCCCCceeeccCccccCC
Q psy14673 311 PPQPAMYLFLLDVSQIAAQSGYLYTVCEVLLNQLKSMPG-DRRTSIAIITYDSAVHFYSLAEGQTQPSQMILTDIDDIFL 389 (912)
Q Consensus 311 ~~~pp~~vFvID~s~~a~~~g~l~~~~~si~~~L~~lp~-~~~~~VglITfd~~V~~y~l~~~~~~~~~~vv~dl~d~f~ 389 (912)
+..+.-++||||.|...... -++.++++++..++.+.. ..+.|||||+|++.+.+.- ++.+.
T Consensus 240 ~~~~~div~vlD~SgSM~~~-~~~~~k~~~~~~i~~l~~~~~~~rv~lv~f~~~~~~~~--------------~l~~~-- 302 (741)
T 3hrz_D 240 PSGSMNIYLVLDGSGSIGAS-DFTGAKKCLVNLIEKVASYGVKPRYGLVTYATYPKIWV--------------KVSEA-- 302 (741)
T ss_dssp TTCEEEEEEEEECSTTTCHH-HHHHHHHHHHHHHHHHHHTTCCCEEEEEEESSSEEEEE--------------CTTSG--
T ss_pred CCCceeEEEEeccCCccccc-chHHHHHHHHHHHHhhhccCCCceEEEEEeccCCceeE--------------eeccc--
Confidence 44567799999999764322 377788888888877753 2346999999988654320 00000
Q ss_pred CCCCCcccchhHhHHHHHHHHHhCCccccCCCCCCCcHHHHHHHHHHhhcC-----CCC------EEEEEecCCCCCCCC
Q psy14673 390 PSPENILVNLSECYDMIVDLLKQLPGKFKDSLDSGSALGPALQAAFKLLQP-----TGG------RITIFQTCLPNRGPG 458 (912)
Q Consensus 390 p~~~~~lv~l~e~~~~i~~lL~~L~~~~~~~~~~~~~~G~AL~~A~~ll~~-----~GG------rI~~f~~g~pt~GpG 458 (912)
-...++.+.+.|+.|.... ......+.+|.||..|..+|.. .++ .||++++|.+|.|..
T Consensus 303 ---------~~~~~~~~~~~i~~l~~~~-~~~~ggT~~~~aL~~a~~~l~~~~~~~~~~~~~~~~~iillTDG~~n~g~~ 372 (741)
T 3hrz_D 303 ---------DSSNADWVTKQLNEINYED-HKLKSGTNTKKALQAVYSMMSWPDDVPPEGWNRTRHVIILMTDGLHNMGGD 372 (741)
T ss_dssp ---------GGGCHHHHHHHHTTCCGGG-GSSSCCCCHHHHHHHHHHHHCCC--CCCTTGGGEEEEEEEEECSCCCSSSC
T ss_pred ---------CCcCHHHHHHHHHhccccc-ccCCCChHHHHHHHHHHHHHhhhhhccccchhccCeEEEEECCCccccCCC
Confidence 0123456677777775211 1135678999999999998831 122 488999999998741
Q ss_pred cccCCCCCCCCCCCCCCCCCchHHHHHHHHHHHhhCCcEEEEEEecCCccChhhhcccccCCCce--EEecCCCC
Q psy14673 459 ALQSRENPNQRSNDDPPHMNPATDFYKKIALECTSFYIAVDLFILNSQYVDLATLSGVSKFSSGC--IHHIPLYS 531 (912)
Q Consensus 459 ~l~~~~~~~~~~~~~~~~~~~~~~fY~~La~~~~~~~isvdlf~~s~~~~~l~~l~~l~~~TGG~--v~~~~~f~ 531 (912)
-....++ . .........+.++.+.||.|..+.+.. .+|..+|..|+..+||. +++.++|+
T Consensus 373 p~~~~~~-i-----------~~~~~~~~~a~~~~~~gi~i~~igvG~-~~~~~~L~~ia~~~~g~~~~~~~~~~~ 434 (741)
T 3hrz_D 373 PITVIDE-I-----------RDLLYIGKDRKNPREDYLDVYVFGVGP-LVNQVNINALASKKDNEQHVFKVKDME 434 (741)
T ss_dssp THHHHHH-H-----------HHHTTCSSCTTCCCGGGEEEEEEECSS-SCCHHHHHHHSCCCTTCCCEECBSSHH
T ss_pred chHHHHH-H-----------HHHhhcccccccccccCeeEEEEeCCC-cCCHHHHHHHhcCCCCcceEEEeCCHH
Confidence 1110000 0 000000112234455677666665543 48889999999999995 77766654
No 31
>1jey_B KU80; double-strand DNA break repair, non-homologous END-joining, protein/nucleic acid complex, alpha/beta domain, beta barrel; HET: DNA; 2.50A {Homo sapiens} SCOP: b.131.1.2 c.62.1.4 PDB: 1jeq_B*
Probab=97.71 E-value=3.8e-05 Score=90.62 Aligned_cols=145 Identities=14% Similarity=0.157 Sum_probs=87.2
Q ss_pred cEEEEEEEccHhHHhh-----chHHHHHHHHHHHHhc---CCCCCCceEEEEEEccEEEEEEcCCCCCCCceeeccCccc
Q psy14673 315 AMYLFLLDVSQIAAQS-----GYLYTVCEVLLNQLKS---MPGDRRTSIAIITYDSAVHFYSLAEGQTQPSQMILTDIDD 386 (912)
Q Consensus 315 p~~vFvID~s~~a~~~-----g~l~~~~~si~~~L~~---lp~~~~~~VglITfd~~V~~y~l~~~~~~~~~~vv~dl~d 386 (912)
-..|||||+|....+. ..|+.+++++...++. ...+. +||||+|++.-.--.+..........+
T Consensus 8 e~iv~~iDvS~SM~~~d~~~~srl~~ak~~i~~~i~~ki~~~~~D--~vGlv~f~~~~~~~plt~d~~y~~i~v------ 79 (565)
T 1jey_B 8 AAVVLCMDVGFTMSNSIPGIESPFEQAKKVITMFVQRQVFAENKD--EIALVLFGTDGTDNPLSGGDQYQNITV------ 79 (565)
T ss_dssp EEEEEEEECCGGGGCCBTTBCCHHHHHHHHHHHHHHHHHHTTCCC--EEEEEEESCSSCBSTTCTTTCSTTEEE------
T ss_pred eEEEEEEECChHhcccCCCCCCcHHHHHHHHHHHHHHHhcCCCCC--EEEEEEEccCCCCCccccccCCCceEE------
Confidence 4689999999865432 3688899999888873 33333 899999986531100000000001111
Q ss_pred cCCCCCCCcccchhH-hHHHHHHHHHh-CCccccCCCCCCCcHHHHHHHHHHhhcCC------C-CEEEEEecCCCCCCC
Q psy14673 387 IFLPSPENILVNLSE-CYDMIVDLLKQ-LPGKFKDSLDSGSALGPALQAAFKLLQPT------G-GRITIFQTCLPNRGP 457 (912)
Q Consensus 387 ~f~p~~~~~lv~l~e-~~~~i~~lL~~-L~~~~~~~~~~~~~~G~AL~~A~~ll~~~------G-GrI~~f~~g~pt~Gp 457 (912)
+.++.. ....|.. |+. |. ......++|.||.+|..+|+.. + -||++||+|--+.|.
T Consensus 80 ---------l~~l~~~~~~~l~~-l~~~l~-----~~~~~t~i~~al~~A~~~l~~~~~~~k~~~krIiLlTDg~~~~~~ 144 (565)
T 1jey_B 80 ---------HRHLMLPDFDLLED-IESKIQ-----PGSQQADFLDALIVSMDVIQHETIGKKFEKRHIEIFTDLSSRFSK 144 (565)
T ss_dssp ---------EEEEECCCHHHHHH-HHTTCC-----CCSSCCCHHHHHHHHHHHHHHHSSSSCCSEEEEEEECCCCSCCCC
T ss_pred ---------eecCCCCCHHHHHH-HHhhcc-----CCCccccHHHHHHHHHHHHHHHhhcccccccEEEEEeCCCCCCCH
Confidence 112211 1222323 333 42 1224678999999999999653 2 379999988655431
Q ss_pred CcccCCCCCCCCCCCCCCCCCchHHHHHHHHHHHhhCCcEEE-EEEecCC
Q psy14673 458 GALQSRENPNQRSNDDPPHMNPATDFYKKIALECTSFYIAVD-LFILNSQ 506 (912)
Q Consensus 458 G~l~~~~~~~~~~~~~~~~~~~~~~fY~~La~~~~~~~isvd-lf~~s~~ 506 (912)
. -..++|..+.+.||.|+ ++.+..+
T Consensus 145 ~------------------------~~~~~a~~l~~~gI~i~~vig~g~~ 170 (565)
T 1jey_B 145 S------------------------QLDIIIHSLKKCDISLQFFLPFSLG 170 (565)
T ss_dssp T------------------------THHHHHHHHHHTTEEEEEEESSCCC
T ss_pred H------------------------HHHHHHHHHHhcCcEEEEEeccCCC
Confidence 0 13678999999999999 6655443
No 32
>3zqk_A VON willebrand factor; blood clotting, adamts-13, force sensor, VON willebrand DISE domain, haemostasis; HET: NAG; 1.70A {Homo sapiens} PDB: 3ppv_A 3ppx_A 3ppw_A 3ppy_A 3gxb_A*
Probab=97.67 E-value=0.00079 Score=67.99 Aligned_cols=153 Identities=10% Similarity=0.083 Sum_probs=96.1
Q ss_pred CCCcEEEEEEEccHhHHhhchHHHHHHHHHHHHhcCCC-CCCceEEEEEEccEEEEEEcCCCCCCCceeeccCccccCCC
Q psy14673 312 PQPAMYLFLLDVSQIAAQSGYLYTVCEVLLNQLKSMPG-DRRTSIAIITYDSAVHFYSLAEGQTQPSQMILTDIDDIFLP 390 (912)
Q Consensus 312 ~~pp~~vFvID~s~~a~~~g~l~~~~~si~~~L~~lp~-~~~~~VglITfd~~V~~y~l~~~~~~~~~~vv~dl~d~f~p 390 (912)
..+--.+||||.|...- ..-++.++++++..++.+.- ....+||+|+|++.++..- ++.+.
T Consensus 19 ~~~~DivfvlD~S~Sm~-~~~~~~~k~~~~~~~~~l~~~~~~~rv~vv~fs~~~~~~~--------------~l~~~--- 80 (199)
T 3zqk_A 19 SMVLDVAFVLEGSDKIG-EADFNRSKEFMEEVIQRMDVGQDSIHVTVLQYSYMVTVEY--------------PFSEA--- 80 (199)
T ss_dssp CCCCEEEEEEECCTTTC-HHHHHHHHHHHHHHHHHSCBSTTSBEEEEEEESSSEEEEE--------------CTTSC---
T ss_pred CCCcCEEEEEECCCCCC-HHHHHHHHHHHHHHHHhcCCCCCceEEEEEEECCcccEEE--------------ecCCc---
Confidence 34667899999997533 22367888999999988842 2346999999998766421 01000
Q ss_pred CCCCcccchhHhHHHHHHHHHhCCccccCCCCCCCcHHHHHHHHHHh-hcC-CCC------EEEEEecCCCCCCCCcccC
Q psy14673 391 SPENILVNLSECYDMIVDLLKQLPGKFKDSLDSGSALGPALQAAFKL-LQP-TGG------RITIFQTCLPNRGPGALQS 462 (912)
Q Consensus 391 ~~~~~lv~l~e~~~~i~~lL~~L~~~~~~~~~~~~~~G~AL~~A~~l-l~~-~GG------rI~~f~~g~pt~GpG~l~~ 462 (912)
..++.+...|+.|+.. ....+.+|.||..|... +.. .|+ .|+++++|.++-
T Consensus 81 ----------~~~~~~~~~i~~l~~~----gg~~T~~~~aL~~a~~~l~~~~~g~r~~~~~~iillTDG~~~d------- 139 (199)
T 3zqk_A 81 ----------QSKGDILQRLREIRYQ----GGNRTNTGLALRYLSDHSFLVSQGDREQAPNLVYMVTGNPASD------- 139 (199)
T ss_dssp ----------CCHHHHHHHHHHCCCC----CCSCCCHHHHHHHCCCCCTCGGGTCCTTSCEEEEEEECSCCSS-------
T ss_pred ----------CCHHHHHHHHHhCcCC----CCCcChHHHHHHHHHHHhhCcccCCCCCCCeEEEEEeCCCCch-------
Confidence 1234566677777521 12248899999999884 332 333 477777775321
Q ss_pred CCCCCCCCCCCCCCCCchHHHHHHHHHHHhhCCcEEEEEEecCC-ccChhhhcccccCCCceEEecCCCCC
Q psy14673 463 RENPNQRSNDDPPHMNPATDFYKKIALECTSFYIAVDLFILNSQ-YVDLATLSGVSKFSSGCIHHIPLYSG 532 (912)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~fY~~La~~~~~~~isvdlf~~s~~-~~~l~~l~~l~~~TGG~v~~~~~f~~ 532 (912)
+ . ++ . ..|| .+|++.-. ..|..+|..++. +|..++.++|+.
T Consensus 140 --~-v----~~---~---------------~~~v--~v~~iGiG~~~~~~~L~~iA~--~~~~~~~~~~~~ 181 (199)
T 3zqk_A 140 --E-I----KR---L---------------PGDI--QVVPIGVGPNANVQELERIGW--PNAPILIQDFET 181 (199)
T ss_dssp --C-C----CC---C---------------CTTE--EEEEEEESTTCCHHHHHHHHT--TSCCEEESCTTT
T ss_pred --H-H----HH---H---------------hCCC--EEEEEEcCCCCCHHHHHHHhC--CCceEEeCCHHH
Confidence 0 0 00 0 1455 45554433 688999999997 566677888774
No 33
>2xgg_A Microneme protein 2; A/I domain, cell adhesion, hydrolase; 2.05A {Toxoplasma gondii}
Probab=97.67 E-value=0.00055 Score=67.82 Aligned_cols=144 Identities=16% Similarity=0.115 Sum_probs=91.2
Q ss_pred CCcEEEEEEEccHhHHhhchHHHHHHHHHHHHhcCCCC-CCceEEEEEEccEEEEEEcCCCCCCCceeeccCccccCCCC
Q psy14673 313 QPAMYLFLLDVSQIAAQSGYLYTVCEVLLNQLKSMPGD-RRTSIAIITYDSAVHFYSLAEGQTQPSQMILTDIDDIFLPS 391 (912)
Q Consensus 313 ~pp~~vFvID~s~~a~~~g~l~~~~~si~~~L~~lp~~-~~~~VglITfd~~V~~y~l~~~~~~~~~~vv~dl~d~f~p~ 391 (912)
.+.-++||||+|...- ..-++.+++.++..++.+... ...+||+|+|++.+++.- ++.+.
T Consensus 16 ~~~divfvlD~SgSm~-~~~~~~~k~~~~~~i~~l~~~~~~~rv~vv~F~~~~~~~~--------------~l~~~---- 76 (178)
T 2xgg_A 16 NQLDICFLIDSSGSIG-IQNFRLVKQFLHTFLMVLPIGPEEVNNAVVTYSTDVHLQW--------------DLQSP---- 76 (178)
T ss_dssp TCEEEEEEEECCTTTC-HHHHHHHHHHHHHHHHHSCBSTTSEEEEEEEESSSEEEEE--------------CTTSG----
T ss_pred CCeeEEEEEECCCCCC-HHHHHHHHHHHHHHHHhcCCCCCCeEEEEEEeCCceEEEE--------------eCCCC----
Confidence 3678999999997532 224778899999999888642 346999999998765310 00000
Q ss_pred CCCcccchhHhHHHHHHHHHhCCccccCCCCCCCcHHHHHHHHHHhh-cC-CC------CEEEEEecCCCCCCCCcccCC
Q psy14673 392 PENILVNLSECYDMIVDLLKQLPGKFKDSLDSGSALGPALQAAFKLL-QP-TG------GRITIFQTCLPNRGPGALQSR 463 (912)
Q Consensus 392 ~~~~lv~l~e~~~~i~~lL~~L~~~~~~~~~~~~~~G~AL~~A~~ll-~~-~G------GrI~~f~~g~pt~GpG~l~~~ 463 (912)
-.+.++.+...|+.|+. ....+.+|.||..|...| .. .| ..|+++++|.++.|
T Consensus 77 -------~~~~~~~~~~~i~~l~~-----~~g~T~~~~aL~~a~~~l~~~~~g~r~~~~~~iillTDG~~~~~------- 137 (178)
T 2xgg_A 77 -------NAVDKQLAAHAVLDMPY-----KKGSTNTSDGLKACKQILFTGSRPGREHVPKLVIGMTDGESDSD------- 137 (178)
T ss_dssp -------GGSCHHHHHHHHHHCCC-----CCCCCCHHHHHHHHHHHHHHCCCTTCTTSCEEEEEEESSCCCHH-------
T ss_pred -------CccCHHHHHHHHHhCCC-----CCCCccHHHHHHHHHHHhcCcccCCCCCCCEEEEEEcCCCCCCC-------
Confidence 00134556677777752 234789999999999975 22 22 46888888876643
Q ss_pred CCCCCCCCCCCCCCCchHHHHHHHHHHHhhCCcEEEEEEecCCccChhhh
Q psy14673 464 ENPNQRSNDDPPHMNPATDFYKKIALECTSFYIAVDLFILNSQYVDLATL 513 (912)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~fY~~La~~~~~~~isvdlf~~s~~~~~l~~l 513 (912)
.-+.+.+.++.+.||.|..+.+..+ +|-..|
T Consensus 138 ------------------~~~~~~~~~l~~~gi~v~~igvG~~-~~~~~l 168 (178)
T 2xgg_A 138 ------------------FRTVRAAKEIRELGGIVTVLAVGHY-VAAALV 168 (178)
T ss_dssp ------------------HHHSHHHHHHHHTTCEEEEEECC---------
T ss_pred ------------------ccHHHHHHHHHHCCCEEEEEEcCCc-CCHHHH
Confidence 0134677788888988777766433 444443
No 34
>3k6s_A Integrin alpha-X; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_A* 3k72_A*
Probab=97.49 E-value=0.0002 Score=90.59 Aligned_cols=160 Identities=13% Similarity=0.136 Sum_probs=106.7
Q ss_pred CcEEEEEEEccHhHHhhchHHHHHHHHHHHHhcCCCCCCceEEEEEEccEEEEE-EcCCCCCCCceeeccCccccCCCCC
Q psy14673 314 PAMYLFLLDVSQIAAQSGYLYTVCEVLLNQLKSMPGDRRTSIAIITYDSAVHFY-SLAEGQTQPSQMILTDIDDIFLPSP 392 (912)
Q Consensus 314 pp~~vFvID~s~~a~~~g~l~~~~~si~~~L~~lp~~~~~~VglITfd~~V~~y-~l~~~~~~~~~~vv~dl~d~f~p~~ 392 (912)
+.-.+||||.|...- ..-++.+++.++..++.+..+ +++||||+|++.+++. .+.. ..+.+
T Consensus 130 ~~DIvfvlD~SgSm~-~~~f~~~k~fv~~lv~~~~~~-~~rVglV~Fs~~~~~~~~lt~---------~~~~~------- 191 (1095)
T 3k6s_A 130 EQDIVFLIDGSGSIS-SRNFATMMNFVRAVISQFQRP-STQFSLMQFSNKFQTHFTFEE---------FRRSS------- 191 (1095)
T ss_dssp CEEEEEEEECCTTSC-SHHHHHHHHHHHHHHHSSCSS-SEEEEEEEESSSEEEEECSHH---------HHSCS-------
T ss_pred CccEEEEEcCCCCCC-hhHHHHHHHHHHHHHHhcccc-ccEEEEEEECCeEEEEecCcc---------cCCHH-------
Confidence 566899999997532 334778999999999998743 4799999999876542 1110 00100
Q ss_pred CCcccchhHhHHHHHHHHHhCCccccCCCCCCCcHHHHHHHHHHhh-c-CCCC------EEEEEecCCCCCCCCcccCCC
Q psy14673 393 ENILVNLSECYDMIVDLLKQLPGKFKDSLDSGSALGPALQAAFKLL-Q-PTGG------RITIFQTCLPNRGPGALQSRE 464 (912)
Q Consensus 393 ~~~lv~l~e~~~~i~~lL~~L~~~~~~~~~~~~~~G~AL~~A~~ll-~-~~GG------rI~~f~~g~pt~GpG~l~~~~ 464 (912)
.+..+++.|.. ....+.+|.||..|...+ . ..|+ .||++++|.++..+.
T Consensus 192 ------------~l~~ai~~i~~-----~gG~T~~g~AL~~a~~~lf~~~~g~R~~~~kviIllTDG~~~~d~~------ 248 (1095)
T 3k6s_A 192 ------------NPLSLLASVHQ-----LQGFTYTATAIQNVVHRLFHASYGARRDAAKILIVITDGKKEGDSL------ 248 (1095)
T ss_dssp ------------CGGGGTTTCCC-----CCSCBCHHHHHHHHHTTTTSTTTTCCSSSEEEEEEEESSCCBSCSS------
T ss_pred ------------HHHHHHhhhhc-----ccCCChHHHHHHHHHHhhccccccCCCCCCeEEEEEeCCCcCCCch------
Confidence 11122334432 134689999999998744 3 2333 478888887652110
Q ss_pred CCCCCCCCCCCCCCchHHHHHHHHHHHhhCCcEEEEEEecCCc---cChhhhcccccCCCc-eEEecCCCCC
Q psy14673 465 NPNQRSNDDPPHMNPATDFYKKIALECTSFYIAVDLFILNSQY---VDLATLSGVSKFSSG-CIHHIPLYSG 532 (912)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~fY~~La~~~~~~~isvdlf~~s~~~---~~l~~l~~l~~~TGG-~v~~~~~f~~ 532 (912)
-+.+.+.++.+.||.|-.+.+..++ ++..+|..+|..++| .++..++|+.
T Consensus 249 ------------------~~~~~a~~~r~~GI~i~aIGVG~~~~~~~d~~eL~~IAs~p~g~~vf~v~d~~~ 302 (1095)
T 3k6s_A 249 ------------------DYKDVIPMADAAGIIRYAIGVGLAFQNRNSWKELNDIASKPSQEHIFKVEDFDA 302 (1095)
T ss_dssp ------------------CHHHHHHHHHHHCEEECCEEBSSGGGSTTSSHHHHTTSCSSTTTSCCCBSCSGG
T ss_pred ------------------hHHHHHHHHHHCCCEEEEEecccccccccCHHHHHHHHcCCCCceEEEcCCHHH
Confidence 1356777888888877666666552 689999999999887 6777777764
No 35
>1kcq_A Gelsolin, brevin, ADF, AGEL; alpha-beta structure, actin-binding protein, familial amyloi finnish type, cadmium binding, metal binding; 1.65A {Homo sapiens} SCOP: d.109.1.1
Probab=97.49 E-value=0.0005 Score=61.80 Aligned_cols=88 Identities=14% Similarity=0.157 Sum_probs=59.9
Q ss_pred cceeeecccCCCCCCccccCCcccCCccccccccccccCeEEEEeCCceEEEEecCCCChhHHhhccCCCCcCCCCcccc
Q psy14673 753 YPELYPIHTLDQDPTIEWNELQVPIPRILQLSAERLQATGTYLLNMPDLIIILVRHGTSPAICSGLFGFQSVAQMPETLF 832 (912)
Q Consensus 753 yP~L~~~~~~~~~~~~~~~~~~~~~P~~l~Ls~~~l~~~giyLlD~g~~i~i~vg~~v~~~~~~~lfg~~~~~~~~~~~~ 832 (912)
.|+||.++.- + ...-..++++.++|.++.+||||+|..||+|+|+.++..-
T Consensus 2 ~~rL~~v~g~----------~-~~~~~eV~~~~~sLns~d~FILd~g~~iyvW~G~~s~~~E------------------ 52 (104)
T 1kcq_A 2 VQRLFQVKGR----------R-VVRATEVPVSWESFNNGDCFILDLGNNIHQWCGSNSNRYE------------------ 52 (104)
T ss_dssp CCEEEEEEES----------S-SEEEEEECSSGGGCCTTSEEEEECSSEEEEEECTTCCHHH------------------
T ss_pred CcEEEEEECC----------C-cEEEEEecCCHHHcCCCCeEEEeCCCEEEEEeCCCCCHHH------------------
Confidence 3788888741 0 1112346789999999999999999999999999887543
Q ss_pred cCCCCchHHHHHHHHHHHHHhh-cCCCcccEEEEeCCCCcHHHHHHHh
Q psy14673 833 ELPQLETQLSLKLNSFISYLND-DKAYVSPVKVIKDSSPDRMEFYDKL 879 (912)
Q Consensus 833 ~lp~~d~~~~~~~~~~i~~l~~-~r~~~~p~~iv~~~~~~~~~f~~~l 879 (912)
-.+...+.+.+++ .|....++.+|.++... ..|...|
T Consensus 53 ---------k~~A~~~a~~i~~~er~~~~~i~~v~eG~E~-~~Fw~~L 90 (104)
T 1kcq_A 53 ---------RLKATQVSKGIRDNERSGRARVHVSEEGTEP-EAMLQVL 90 (104)
T ss_dssp ---------HHHHHHHHHHHHHHTSTTCSEEEEEETTCCC-HHHHHHH
T ss_pred ---------HHHHHHHHHHHHhhccCCCCcEEEEeCCCCC-HHHHHHc
Confidence 1234455555543 34334678899887754 4565544
No 36
>3fg7_A Villin-1; actin binding protein, gelsolin, actin capping, actin-binding, calcium, cytoplasm, cytoskeleton, structural protein; 2.00A {Homo sapiens} PDB: 2llf_A
Probab=97.18 E-value=0.0011 Score=74.25 Aligned_cols=109 Identities=13% Similarity=0.188 Sum_probs=60.9
Q ss_pred hcceeeecccCCCCCCccccCCcccCCccccccccccccCeEEEEeCCceEEEEecCCCChhHHhhccCCCCcCCCCccc
Q psy14673 752 IYPELYPIHTLDQDPTIEWNELQVPIPRILQLSAERLQATGTYLLNMPDLIIILVRHGTSPAICSGLFGFQSVAQMPETL 831 (912)
Q Consensus 752 iyP~L~~~~~~~~~~~~~~~~~~~~~P~~l~Ls~~~l~~~giyLlD~g~~i~i~vg~~v~~~~~~~lfg~~~~~~~~~~~ 831 (912)
..|+||.+.+- . |.+......+++-+.|.++.+||||+|..||||+|+.++..-.+.
T Consensus 281 ~~~rLf~~s~~--~-------G~~~v~EV~~f~Q~dL~~~dv~ILD~g~~IfVW~G~~as~~Er~~-------------- 337 (398)
T 3fg7_A 281 ITPRLFECSNK--T-------GRFLATEIPDFNQDDLEEDDVFLLDVWDQVFFWIGKHANEEEKKA-------------- 337 (398)
T ss_dssp CCCEEEEEECT--T-------SSCEEEECTTCCGGGCCTTSEEEEECSSCEEEEECTTCCHHHHHH--------------
T ss_pred ccCeeEEEEcC--C-------CCEEEEEecccCHHHCCCCCEEEEeCCCEEEEEECCCCCHHHHHH--------------
Confidence 47999998741 1 112111122588899999999999999999999999988653210
Q ss_pred ccCCCCchHHHHHHHHHHHHHhhcCCCcccEEEEeCCCCcHHHHHHHhc---ccCCCCCCCHHHH
Q psy14673 832 FELPQLETQLSLKLNSFISYLNDDKAYVSPVKVIKDSSPDRMEFYDKLI---EDKNAGGMAYYEF 893 (912)
Q Consensus 832 ~~lp~~d~~~~~~~~~~i~~l~~~r~~~~p~~iv~~~~~~~~~f~~~lv---eD~~~~~~Sy~~f 893 (912)
.-+....+|+.....|....|+.+|.++.... .|....- ..+..+..||.++
T Consensus 338 ---------Al~~A~~yi~~~~~~r~~~tpi~~V~eG~Ep~-~Fk~~F~~Wd~~~~~~~~~~~~~ 392 (398)
T 3fg7_A 338 ---------AATTAQEYLKTHPSGRDPETPIIVVKQGHEPP-TFTGWFLAWDPFKWSGIHVVPNL 392 (398)
T ss_dssp ---------HHHHHHHHHHHSSSSCCTTCCEEEEETTCCCH-HHHTTSSCCCTTCC---------
T ss_pred ---------HHHHHHHHHHhCcccCCCCCCEEEEcCCCCCH-HHHHhhhcCChhhhcccCCHHHh
Confidence 01123333333322444457999999876543 3433331 3344566888765
No 37
>1svq_A Severin; actin-binding; NMR {Dictyostelium discoideum} SCOP: d.109.1.1 PDB: 1svr_A 1svy_A
Probab=97.10 E-value=0.00078 Score=61.56 Aligned_cols=89 Identities=18% Similarity=0.196 Sum_probs=57.7
Q ss_pred cceeeecccCCCCCCccccCCcccCCccccccccccccCeEEEEeCCceEEEEecCCCChhHHhhccCCCCcCCCCcccc
Q psy14673 753 YPELYPIHTLDQDPTIEWNELQVPIPRILQLSAERLQATGTYLLNMPDLIIILVRHGTSPAICSGLFGFQSVAQMPETLF 832 (912)
Q Consensus 753 yP~L~~~~~~~~~~~~~~~~~~~~~P~~l~Ls~~~l~~~giyLlD~g~~i~i~vg~~v~~~~~~~lfg~~~~~~~~~~~~ 832 (912)
.|+||.+..- . ...-..++++.++|.++.+||||+|..||+|+|+..+..-
T Consensus 12 ~~rL~~v~G~--~---------~~~~~eV~~~~ssLns~D~FILd~g~~iyvW~G~~ss~~E------------------ 62 (114)
T 1svq_A 12 KPRLLHISGD--K---------NAKVAEVPLATSSLNSGDCFLLDAGLTIYQFNGSKSSPQE------------------ 62 (114)
T ss_dssp CEEEEEEECT--T---------SCEEEEECCCSSSCCTTSEEEEEETTEEEECCCTTCCHHH------------------
T ss_pred CcEEEEEECC--C---------cEEEEEecCCHHHcCCCCeEEEecCCEEEEEeCCCCCHHH------------------
Confidence 5799988731 0 0111346789999999999999999999999999887542
Q ss_pred cCCCCchHHHHHHHHHHHHHhhcCCCcccEEEEeCCCC-cHHHHHHHh
Q psy14673 833 ELPQLETQLSLKLNSFISYLNDDKAYVSPVKVIKDSSP-DRMEFYDKL 879 (912)
Q Consensus 833 ~lp~~d~~~~~~~~~~i~~l~~~r~~~~p~~iv~~~~~-~~~~f~~~l 879 (912)
-.+.+.+...|...|.-...+.||.++.. ....|...|
T Consensus 63 ---------k~~A~~~a~~i~~er~g~~~i~vv~eg~~~E~~~Fw~~L 101 (114)
T 1svq_A 63 ---------KNKAAEVARAIDAERKGLPKVEVFCETDSDIPAEFWKLL 101 (114)
T ss_dssp ---------HHHHHHHHHHHHHHHTTCSEEEECCCCTTCCCHHHHHHH
T ss_pred ---------HHHHHHHHHHhhhccCCCccEEEEeCCCcCCcHHHHHHc
Confidence 12344444444333322356778877762 234564444
No 38
>2fh1_A Gelsolin; calcium, contractIle protein; 1.55A {Homo sapiens} SCOP: d.109.1.1 d.109.1.1 d.109.1.1 PDB: 1p8x_A 2fh2_A 2fh3_A 2fh4_A 1h1v_G* 1nph_A
Probab=96.59 E-value=0.0041 Score=68.37 Aligned_cols=113 Identities=15% Similarity=0.161 Sum_probs=57.3
Q ss_pred hcceeeecccCCCCCCccccCCcccCCccccccccccccCeEEEEeCCceEEEEecCCCChhHHhhccCCCCcCCCCccc
Q psy14673 752 IYPELYPIHTLDQDPTIEWNELQVPIPRILQLSAERLQATGTYLLNMPDLIIILVRHGTSPAICSGLFGFQSVAQMPETL 831 (912)
Q Consensus 752 iyP~L~~~~~~~~~~~~~~~~~~~~~P~~l~Ls~~~l~~~giyLlD~g~~i~i~vg~~v~~~~~~~lfg~~~~~~~~~~~ 831 (912)
..|+||.+.+- .+..... ++ + -+++.+.|.++.+||||+|..||||+|+.++..-.+.
T Consensus 227 ~~~rLf~~s~~--~G~~~v~--ev--~--~~f~q~dL~~~dv~iLD~g~~IfVW~G~~as~~er~~-------------- 284 (344)
T 2fh1_A 227 HPPRLFACSNK--IGRFVIE--EV--P--GELMQEDLATDDVMLLDTWDQVFVWVGKDSQEEEKTE-------------- 284 (344)
T ss_dssp CCCEEEEEECT--TSSCEEE--EE--C--SSCCGGGSCTTSEEEEECSSCEEEEECTTCCHHHHHH--------------
T ss_pred cCCEEEEEEcC--CCCEEEE--Ec--c--CCcCHhHCCCCCEEEEeCCCEEEEEECCCCCHHHHHH--------------
Confidence 57999998741 1111111 11 1 1578899999999999999999999999988653211
Q ss_pred ccCCCCchHHHHHHHHHHHHHhhcCCCcccEEEEeCCCCcHHHHHHHhc--ccCCCCCCCHHHHHHH
Q psy14673 832 FELPQLETQLSLKLNSFISYLNDDKAYVSPVKVIKDSSPDRMEFYDKLI--EDKNAGGMAYYEFLLR 896 (912)
Q Consensus 832 ~~lp~~d~~~~~~~~~~i~~l~~~r~~~~p~~iv~~~~~~~~~f~~~lv--eD~~~~~~Sy~~fl~~ 896 (912)
.-+....+++.....|+...|+.+|.++.... .|....- +|.--..-+|.+.+..
T Consensus 285 ---------A~~~A~~y~~~~~~~r~~~t~i~~V~eG~Ep~-~Fk~~F~~W~~~~~~~~~~~~~~~~ 341 (344)
T 2fh1_A 285 ---------ALTSAKRYIETDPANRDRRTPITVVKQGFEPP-SFVGWFLGWDDDYWSVDPLDRAMAE 341 (344)
T ss_dssp ---------HHHHHHHHHHTC-------CCEEEEETTCCCH-HHHTTSSSCCTTCC-----------
T ss_pred ---------HHHHHHHHHHhCccCCCCCCcEEEEcCCCCCH-HHHHHHhhcChhhcCCChHHHHHHH
Confidence 01122233332222455567999999876543 3433332 2222222456655543
No 39
>1jey_A KU70; double-strand DNA break repair, non-homologous END-joining, protein/nucleic acid complex, alpha/beta domain, beta barrel; HET: DNA; 2.50A {Homo sapiens} SCOP: b.131.1.1 c.62.1.3 PDB: 1jeq_A* 3rzx_B
Probab=96.57 E-value=0.02 Score=67.86 Aligned_cols=149 Identities=19% Similarity=0.205 Sum_probs=90.0
Q ss_pred cEEEEEEEccHhHHhh------chHHHHHHHHHHHHhc----CCCCCCceEEEEEEccEEEEEEcCCCCCCCceeeccCc
Q psy14673 315 AMYLFLLDVSQIAAQS------GYLYTVCEVLLNQLKS----MPGDRRTSIAIITYDSAVHFYSLAEGQTQPSQMILTDI 384 (912)
Q Consensus 315 p~~vFvID~s~~a~~~------g~l~~~~~si~~~L~~----lp~~~~~~VglITfd~~V~~y~l~~~~~~~~~~vv~dl 384 (912)
=..||+||+|....+. ..|+.+++.+...+.. -+.+ +||||.|++.-. .........++..++
T Consensus 36 e~ivf~IDvS~SM~~~d~~~~~srl~~a~~~v~~~i~~kii~~~~D---~vGlVlfgt~~t----~n~l~~d~i~v~~~L 108 (609)
T 1jey_A 36 DSLIFLVDASKAMFESQSEDELTPFDMSIQCIQSVYISKIISSDRD---LLAVVFYGTEKD----KNSVNFKNIYVLQEL 108 (609)
T ss_dssp EEEEEEEECSGGGGCCCSSSSCCHHHHHHHHHHHHHHHHHHTTCCC---EEEEEEESCSSC----BSTTCCTTEEEEEEE
T ss_pred eEEEEEEECCHHHcCCCCCCCCChHHHHHHHHHHHHHHhhCCCCCC---eEEEEEEccCCC----CCcCCCCCeEEEecC
Confidence 4589999999765432 2688888888888864 4544 899999988642 111111222333222
Q ss_pred cccCCCCCCCcccchhHhHHHHHHHHHhCCc---------cccCCCCCCCcHHHHHHHHHHhhcCC-----CCEEEEEec
Q psy14673 385 DDIFLPSPENILVNLSECYDMIVDLLKQLPG---------KFKDSLDSGSALGPALQAAFKLLQPT-----GGRITIFQT 450 (912)
Q Consensus 385 ~d~f~p~~~~~lv~l~e~~~~i~~lL~~L~~---------~~~~~~~~~~~~G~AL~~A~~ll~~~-----GGrI~~f~~ 450 (912)
+.+ . .+.+. .|..|.. .++ ....+++|.||.+|+.+++.. .=||++||+
T Consensus 109 ~~~----------~----~~~ik-~l~~l~~~~~~~~~~~~~g--~~~~t~l~daL~~a~~~f~~~~~k~~~k~IiL~TD 171 (609)
T 1jey_A 109 DNP----------G----AKRIL-ELDQFKGQQGQKRFQDMMG--HGSDYSLSEVLWVCANLFSDVQFKMSHKRIMLFTN 171 (609)
T ss_dssp ECC----------C----HHHHH-HHHTTSHHHHHHHHHHHHC--CSCCCCHHHHHHHHHHHHHTCSSCEEEEEEEEEES
T ss_pred CCC----------C----HHHHH-HHHHHhhcccchhhhhhcC--CCCCCCHHHHHHHHHHHHHhhchhhcCCEEEEEcC
Confidence 211 0 01111 1111211 111 134689999999999999764 248899998
Q ss_pred CCCCCCCCcccCCCCCCCCCCCCCCCCCchHHHHHHHHHHHhhCCcEEEEEEecCC
Q psy14673 451 CLPNRGPGALQSRENPNQRSNDDPPHMNPATDFYKKIALECTSFYIAVDLFILNSQ 506 (912)
Q Consensus 451 g~pt~GpG~l~~~~~~~~~~~~~~~~~~~~~~fY~~La~~~~~~~isvdlf~~s~~ 506 (912)
|--+.|-. .....-....|..+.+.||.|.+|.++.+
T Consensus 172 g~~p~~~~-------------------~~~~~~~~~~a~~l~~~gI~i~~igig~~ 208 (609)
T 1jey_A 172 EDNPHGND-------------------SAKASRARTKAGDLRDTGIFLDLMHLKKP 208 (609)
T ss_dssp CSCTTTTC-------------------HHHHHHHHHHHHHHHHHTEEEEEEEBCCT
T ss_pred CCCCCCCc-------------------hHHHHHHHHHHHHHHhcCcEEEEEecCCC
Confidence 76444310 01112346789999999999999988654
No 40
>3fg6_A Adseverin, scinderin; C-terminus of adseverin, actin capping, actin-binding, cytos phosphoprotein, actin-binding protein; 3.00A {Homo sapiens}
Probab=96.36 E-value=0.0039 Score=69.16 Aligned_cols=55 Identities=16% Similarity=0.248 Sum_probs=39.5
Q ss_pred hcceeeecccCCCCCCccccCCcccCCccccccccccccCeEEEEeCCceEEEEecCCCChhH
Q psy14673 752 IYPELYPIHTLDQDPTIEWNELQVPIPRILQLSAERLQATGTYLLNMPDLIIILVRHGTSPAI 814 (912)
Q Consensus 752 iyP~L~~~~~~~~~~~~~~~~~~~~~P~~l~Ls~~~l~~~giyLlD~g~~i~i~vg~~v~~~~ 814 (912)
.-|+||.+.+- .+..... ++ + .+++-+.|.++.+||||+|..||||+|+.++..-
T Consensus 268 ~~~rLf~~s~~--~G~~~v~--ev--~--~~f~Q~dL~~~dv~ILD~~~~IfVW~G~~as~~E 322 (371)
T 3fg6_A 268 HPPRLYGCSNK--TGRFVIE--EI--P--GEFTQDDLAEDDVMLLDAWEQIFIWIGKDANEVE 322 (371)
T ss_dssp SCCEEEEEECT--TSSCEEE--EC--C--SSCCGGGSCTTSEEEEECSSCEEEEECTTCCHHH
T ss_pred cCcEEEEEEcC--CCcEEEE--Ee--c--ccccHhHCCCCCEEEEeCCCEEEEEECCCCCHHH
Confidence 35899988741 1111111 11 1 2478899999999999999999999999988654
No 41
>2ww8_A RRGA, cell WALL surface anchor family protein; IGG, pilus, CNA_B, adhesin, integrin, cell adhesion; HET: EPE; 1.90A {Streptococcus pneumoniae}
Probab=95.77 E-value=0.015 Score=71.42 Aligned_cols=146 Identities=18% Similarity=0.232 Sum_probs=80.7
Q ss_pred CCCcEEEEEEEccHhHHhhc-----hHHHHHHHHHHHHhcCCCCCCceEEEEEEccEEEE---EEcCCCCCCCceeeccC
Q psy14673 312 PQPAMYLFLLDVSQIAAQSG-----YLYTVCEVLLNQLKSMPGDRRTSIAIITYDSAVHF---YSLAEGQTQPSQMILTD 383 (912)
Q Consensus 312 ~~pp~~vFvID~s~~a~~~g-----~l~~~~~si~~~L~~lp~~~~~~VglITfd~~V~~---y~l~~~~~~~~~~vv~d 383 (912)
..|.-.|||||+|.+..... .++.++++++..|+.|....+.|||||+|++.+.. ..+..+..........+
T Consensus 222 ~~~~DIVfVLD~SGSM~~~~~~~~~Rl~~~K~a~~~~ld~L~~~~~drVgLV~Fs~~a~~~~~~~v~~~~~~~~g~~~n~ 301 (893)
T 2ww8_A 222 SVPLDVVILLDNSNSMSNIRNKNARRAERAGEATRSLIDKITSDSENRVALVTYASTIFDGTEFTVEKGVADKNGKRLND 301 (893)
T ss_dssp TCCEEEEEEEECCGGGCTTHHHHCCHHHHHHHHHHHHHHHHHTSTTCEEEEEEESSSBCBSCEEEEECCEECTTCCEECC
T ss_pred CCCccEEEEEeCCCCCCCcCccchhHHHHHHHHHHHHHHHhhcCCCcEEEEEEecCcccccccccccccccccccccccc
Confidence 46778999999998754332 36678888888887765433459999999986532 01110000000000000
Q ss_pred -----ccc-cCCCCCCCc-ccchhHhHHHHHHHHHhCCcccc---C----CCCCCCcHHHHHHHHHHhhcC-C--C--CE
Q psy14673 384 -----IDD-IFLPSPENI-LVNLSECYDMIVDLLKQLPGKFK---D----SLDSGSALGPALQAAFKLLQP-T--G--GR 444 (912)
Q Consensus 384 -----l~d-~f~p~~~~~-lv~l~e~~~~i~~lL~~L~~~~~---~----~~~~~~~~G~AL~~A~~ll~~-~--G--Gr 444 (912)
.+. .|......| .+++....+.|..+...|+..-. . .....+.+|.||..|..+|+. . + ..
T Consensus 302 ~~~w~~~~t~~t~~~~~~~~lpLT~d~~~i~~lk~~I~~~~~~~~G~~~l~~~GGT~i~~AL~~A~~lL~~~~~~~~~kv 381 (893)
T 2ww8_A 302 SLFWNYDQTSFTTNTKDYSYLKLTNDKNDIVELKNKVPTEAEDHDGNRLMYQFGATFTQKALMKADEILTQQARQNSQKV 381 (893)
T ss_dssp CTTSCTTCCEEEEECCBCCEEEEECCHHHHHHHHHHSCSCCCCSCTTSGGGGGCSCCHHHHHHHHHHHHHHHSCSSSEEE
T ss_pred ccccccccccccccccccccccccCCHHHHHHHHHHHhhhccccccccccccCCCChHHHHHHHHHHHHHhhcccCCCeE
Confidence 000 000000111 22444444455555555543111 0 124578999999999999963 1 2 35
Q ss_pred EEEEecCCCCCCC
Q psy14673 445 ITIFQTCLPNRGP 457 (912)
Q Consensus 445 I~~f~~g~pt~Gp 457 (912)
||++++|.|+.+.
T Consensus 382 IILLTDG~pt~~~ 394 (893)
T 2ww8_A 382 IFHITDGVPTMSY 394 (893)
T ss_dssp EEEEESSCCSEEC
T ss_pred EEEEcCCCCCccc
Confidence 8888899999753
No 42
>1d0n_A Horse plasma gelsolin; mixed alpha-beta structure, actin-binding protein, protein D packing, contractIle protein; 2.50A {Equus caballus} SCOP: d.109.1.1 d.109.1.1 d.109.1.1 d.109.1.1 d.109.1.1 d.109.1.1 PDB: 2fgh_A* 3ffn_A 3ffk_A* 1rgi_G*
Probab=95.73 E-value=0.02 Score=69.28 Aligned_cols=90 Identities=14% Similarity=0.166 Sum_probs=58.3
Q ss_pred hhhcceeeecccCCCCCCccccCCcccCCccc-cccccccccCeEEEEeCCceEEEEecCCCChhHHhhccCCCCcCCCC
Q psy14673 750 LSIYPELYPIHTLDQDPTIEWNELQVPIPRIL-QLSAERLQATGTYLLNMPDLIIILVRHGTSPAICSGLFGFQSVAQMP 828 (912)
Q Consensus 750 ~~iyP~L~~~~~~~~~~~~~~~~~~~~~P~~l-~Ls~~~l~~~giyLlD~g~~i~i~vg~~v~~~~~~~lfg~~~~~~~~ 828 (912)
....||||.+.+- .| .+...... +++-+.|.++.|||||+|..||||+|+.++..-.+..
T Consensus 610 ~~~~~rLf~~s~~--~G-------~~~v~ev~~~f~Q~dL~~~dv~iLD~~~eifvWiG~~a~~~er~~a---------- 670 (729)
T 1d0n_A 610 DAHPPRLFACSNK--IG-------RFVIEEVPGEFMQEDLATDDVMLLDTWDQVFVWVGKDSQDEEKTEA---------- 670 (729)
T ss_dssp HHSCCEEEEEECT--TT-------CCEEEECCSSCCGGGCCTTSEEEEECSSCEEEEECTTSCHHHHSSH----------
T ss_pred cccCCeEEEEEcC--CC-------cEEEEEecCcccHhHCCCCCEEEEeCCCEEEEEECCCCCHHHHHHH----------
Confidence 3568999998741 11 12111112 5788999999999999999999999999876532110
Q ss_pred cccccCCCCchHHHHHHHHHHHHHhhcCCCcccEEEEeCCCCc
Q psy14673 829 ETLFELPQLETQLSLKLNSFISYLNDDKAYVSPVKVIKDSSPD 871 (912)
Q Consensus 829 ~~~~~lp~~d~~~~~~~~~~i~~l~~~r~~~~p~~iv~~~~~~ 871 (912)
-+.....++.....|....|+++|.++...
T Consensus 671 -------------l~~A~~Y~~~~~~~r~~~~pi~~V~~G~Ep 700 (729)
T 1d0n_A 671 -------------LTSAKRYIDTDPAHRDRRTPITVVKQGFEP 700 (729)
T ss_dssp -------------HHHHHHHHHHCTTCCCTTCCEEEEETTCCC
T ss_pred -------------HHHHHHHHHhCcccCCCCCcEEEEeCCCCC
Confidence 112233333332345455899999987654
No 43
>1j72_A Macrophage capping protein; actin, human, CAP G, GCAP39, MBHL, GELS structural protein; 2.50A {Homo sapiens} SCOP: d.109.1.1 d.109.1.1 d.109.1.1 PDB: 1jhw_A
Probab=95.52 E-value=0.035 Score=60.99 Aligned_cols=57 Identities=14% Similarity=0.155 Sum_probs=40.0
Q ss_pred hcceeeecccCCCCCCccccCCcccCCccccccccccccCeEEEEeCC--ceEEEEecCCCChhH
Q psy14673 752 IYPELYPIHTLDQDPTIEWNELQVPIPRILQLSAERLQATGTYLLNMP--DLIIILVRHGTSPAI 814 (912)
Q Consensus 752 iyP~L~~~~~~~~~~~~~~~~~~~~~P~~l~Ls~~~l~~~giyLlD~g--~~i~i~vg~~v~~~~ 814 (912)
..|+||.+.+- .+..... ++ +...+++.+.|.++.+||||+| ..||||+|+.+++.-
T Consensus 246 ~~~rLy~vs~~--~G~~~v~--ev--~~~~~~~q~~L~s~dv~ILD~g~~~~IyVW~G~~a~~~e 304 (347)
T 1j72_A 246 QAAALYKVSDA--TGQMNLT--KV--ADSSPFALELLISDDCFVLDNGLCGKIYIWKGRKANEKE 304 (347)
T ss_dssp CCCEEEEEECT--TSSCEEE--EE--ECSSSBCGGGCCTTSEEEEECGGGSEEEEEECTTCCHHH
T ss_pred cCCEEEEEECC--CCCEEEE--ee--ccCCCCCHHHcCCCCEEEEecCCCcEEEEEeCCCCCHHH
Confidence 37999998741 1111110 01 0112689999999999999999 999999999988653
No 44
>3rag_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tructural genomics; 1.80A {Alicyclobacillus acidocaldarius subsp}
Probab=95.16 E-value=0.039 Score=56.68 Aligned_cols=93 Identities=19% Similarity=0.223 Sum_probs=61.1
Q ss_pred CCcEEEEEEEccHhHHhhchHHHHHHHHHHHHhcCCCC-CCceEEEEEEccEEEEEEcCCCCCCCceeeccCccccCCCC
Q psy14673 313 QPAMYLFLLDVSQIAAQSGYLYTVCEVLLNQLKSMPGD-RRTSIAIITYDSAVHFYSLAEGQTQPSQMILTDIDDIFLPS 391 (912)
Q Consensus 313 ~pp~~vFvID~s~~a~~~g~l~~~~~si~~~L~~lp~~-~~~~VglITfd~~V~~y~l~~~~~~~~~~vv~dl~d~f~p~ 391 (912)
.|.-+||+||+|.+.. +-++.++++++..+..+... .+.+||+|+|+.... . ...++.+
T Consensus 133 ~~~~vvfLVDtSgSM~--~kl~~vk~al~~Ll~sl~~~~~~~~VavV~F~~~~~-------~---~~~ll~p-------- 192 (242)
T 3rag_A 133 VALHLVVCLDTSASMR--DKIPTVREAVRDLALSLKVRSGPLAVSVIAFPGKGE-------E---ATRLVQP-------- 192 (242)
T ss_dssp SCEEEEEEEECSGGGT--TTHHHHHHHHHHHHHHHTTSSSCEEEEEEEESCSTT-------C---SCEEEEE--------
T ss_pred CCCCEEEEEECcccHH--HHHHHHHHHHHHHHHHHhccCCCcEEEEEEECCCCc-------c---ceeecCC--------
Confidence 5778999999998754 46999999999999887532 356999999986420 0 0001101
Q ss_pred CCCcccchhHhHHHHHHHHHhCCccccCCCCCCCcHHHHHHHHHHhhc
Q psy14673 392 PENILVNLSECYDMIVDLLKQLPGKFKDSLDSGSALGPALQAAFKLLQ 439 (912)
Q Consensus 392 ~~~~lv~l~e~~~~i~~lL~~L~~~~~~~~~~~~~~G~AL~~A~~ll~ 439 (912)
..... .+...|..|+ ....+.+|.||..|..+++
T Consensus 193 -------fT~~~-~~~~~l~~L~------agG~Tplg~AL~~A~~~~~ 226 (242)
T 3rag_A 193 -------FSSEV-NVAALEAELV------ARGGTPTGPAIDHAADLLL 226 (242)
T ss_dssp -------EESSC-CHHHHHHHCC------CCSCCCHHHHHHHHHHHHH
T ss_pred -------CCChH-HHHHHHhhCC------CCCCCcHHHHHHHHHHHHH
Confidence 01111 1234466664 2456679999999999885
No 45
>3t3p_B Integrin beta-3; integrin, cell adhesion, blood clotting, fibrinogen, platele; HET: NAG BMA MAN; 2.20A {Homo sapiens} PDB: 3t3m_B* 3nig_B* 3nif_B* 3nid_B* 2vdr_B* 2vc2_B* 2vdk_B* 2vdm_B* 2vdn_B* 2vdl_B* 2vdp_B* 2vdq_B* 2vdo_B* 3fcu_B* 1txv_B* 1ty3_B* 1ty5_B* 1ty6_B* 1ty7_B* 1tye_B*
Probab=94.56 E-value=7.7 Score=43.60 Aligned_cols=269 Identities=14% Similarity=0.155 Sum_probs=132.9
Q ss_pred CCCcEEEEEEEccHhHHhh-chHHHHHHHHHHHHhcCCCCCCceEEEEEEccE-EEEEEcCCCCCCCceeeccCccccC-
Q psy14673 312 PQPAMYLFLLDVSQIAAQS-GYLYTVCEVLLNQLKSMPGDRRTSIAIITYDSA-VHFYSLAEGQTQPSQMILTDIDDIF- 388 (912)
Q Consensus 312 ~~pp~~vFvID~s~~a~~~-g~l~~~~~si~~~L~~lp~~~~~~VglITfd~~-V~~y~l~~~~~~~~~~vv~dl~d~f- 388 (912)
..|-=.+|++|+|....+. .-++.+...|...|..+-.+ -||||.+|-+. |.-|- ...|.. ++..+-
T Consensus 109 ~ypvDLy~LmDlS~SM~ddl~~lk~lg~~L~~~l~~~t~~--~riGfgsFvDk~v~P~~----~~~p~~----~l~nPc~ 178 (472)
T 3t3p_B 109 DYPVDIYYLMDLSYSMKDDLWSIQNLGTKLATQMRKLTSN--LRIGFGAFVDKPVSPYM----YISPPE----ALENPCY 178 (472)
T ss_dssp SCCEEEEEEEECSGGGHHHHHHTTTHHHHHHHHHTTTCSC--EEEEEEEECCCSSTTTS----CCCSHH----HHHCTTT
T ss_pred CCCceEEEEEccCcchHHHHHHHHHHHHHHHHHHHhcCcC--cEEEEEEeeccccCccc----cCChhh----hhcCCCc
Confidence 3467789999999764431 12333445555555555444 49999999443 21110 000110 011110
Q ss_pred ------C-CCCCCcccchhHhHHHHHHHHHhCCccccCCCCCCCcHHHHHHHHH--Hhhc--CCCCEEEEEecCCCC--C
Q psy14673 389 ------L-PSPENILVNLSECYDMIVDLLKQLPGKFKDSLDSGSALGPALQAAF--KLLQ--PTGGRITIFQTCLPN--R 455 (912)
Q Consensus 389 ------~-p~~~~~lv~l~e~~~~i~~lL~~L~~~~~~~~~~~~~~G~AL~~A~--~ll~--~~GGrI~~f~~g~pt--~ 455 (912)
. |..-+...++.+..+.+.+.+.++. ...+...|+..+.+-+.+|+ .-+. ...-||+||++-.+- .
T Consensus 179 ~~~~~c~p~f~fr~~l~LT~d~~~F~~~V~~~~-iSGn~D~PEgg~dAl~qaavC~~~igWR~~a~rllV~~TDa~~H~a 257 (472)
T 3t3p_B 179 DMKTTCLPMFGYKHVLTLTDQVTRFNEEVKKQS-VSRNRDAPEGGFDAIMQATVCDEKIGWRNDASHLLVFTTDAKTHIA 257 (472)
T ss_dssp TTTSCCCCCCSEEEEEEEESCHHHHHHHHHHCC-CCCCSSSSBCHHHHHHHHHHCHHHHTCCSSSEEEEEEEESSCBCCT
T ss_pred ccccCCCCCcceeEeeccCCCHHHHHHHHhhcc-ccCCCCCCchHHHHHHHHhcchhhcCCCCCceEEEEEECCCCcCcC
Confidence 0 1111224567666677777777764 22344556666665566654 2332 134689998887775 4
Q ss_pred CCCcccCCCCCCC-CCC-CCCCCCCchHHH----HHHHHHHHhhCCcEEEEEEecCCccChhh-hcccccCCCceEEecC
Q psy14673 456 GPGALQSRENPNQ-RSN-DDPPHMNPATDF----YKKIALECTSFYIAVDLFILNSQYVDLAT-LSGVSKFSSGCIHHIP 528 (912)
Q Consensus 456 GpG~l~~~~~~~~-~~~-~~~~~~~~~~~f----Y~~La~~~~~~~isvdlf~~s~~~~~l~~-l~~l~~~TGG~v~~~~ 528 (912)
|-|++...-.++. .-| ++...+..+..+ ...|+.++.+++|.+ ||+.+....++++ |..+. .|+.+-...
T Consensus 258 gDgkL~GIv~pnDg~CHL~~~~~Y~~s~~~DYPSv~ql~~~l~e~nI~~-IFAVt~~~~~~Y~~L~~~i--p~s~vg~L~ 334 (472)
T 3t3p_B 258 LDGRLAGIVQPNDGQCHVGSDNHYSASTTMDYPSLGLMTEKLSQKNINL-IFAVTENVVNLYQNYSELI--PGTTVGVLS 334 (472)
T ss_dssp TGGGGGTCCCCCCCCCCBCTTCBBTTTTTSCCCCHHHHHHHHHHTTCEE-EEEECGGGHHHHHHHHHTS--TTCEEEECC
T ss_pred CCccccceecCCCCceEECCCCcccccccCCCCCHHHHHHHHHhcCccE-EEEEeccchhHHHHHHHhC--CCceeeecc
Confidence 7777765422221 012 111112222111 356777888888654 8888776555432 33322 344443332
Q ss_pred CCCCCCchhHHHHHHHHHHhhhcccccceeEEEEe-cCCceEEEE--eeceeccCCCceeeccCCCCCeEEEEEEEec
Q psy14673 529 LYSGKNMSHVYQLDRMFSRYLTRKIGFESVMRIRC-TKGMSIHTF--HGNFFVRSTDLLALPNVNPDAGYGIQISIDE 603 (912)
Q Consensus 529 ~f~~~~~~~~~~~~~~l~~~l~~~~g~~a~l~vr~-S~gl~i~~~--~G~~~~~~t~~~~l~~i~~~~si~~~~~~~~ 603 (912)
. +. ...-.|..+-++.|. -.+.|+... .+|++|.-. -++... .+..-...++....++.|.+++.-
T Consensus 335 ~-dS---sNiv~LI~~aY~~i~----s~V~l~~~~~p~~l~v~y~s~C~~~~~-~~~~~~C~~v~ig~~v~F~v~v~~ 403 (472)
T 3t3p_B 335 M-DS---SNVLQLIVDAYGKIR----SKVELEVRDLPEELSLSFNATCLNNEV-IPGLKSCMGLKIGDTVSFSIEAKV 403 (472)
T ss_dssp T-TS---TTHHHHHHHHHHHHT----TCEEEEEESCCTTEEEEEEEEETTTEE-EETCCEECSCCTTCEEEEEEEEEE
T ss_pred c-cc---hhHHHHHHHHHHHhh----eEEEEeeCCCCCcEEEEEEeECCCCCc-cCCCccCCCcccCCEEEEEEEEEe
Confidence 2 22 223455555444432 234444433 456655421 111110 011124556666777777776664
No 46
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=94.49 E-value=1.1 Score=53.38 Aligned_cols=269 Identities=13% Similarity=0.130 Sum_probs=130.2
Q ss_pred CCCcEEEEEEEccHhHHhh-chHHHHHHHHHHHHhcCCCCCCceEEEEEEccEEEEEEcCCCCCCCceeeccCc-cccC-
Q psy14673 312 PQPAMYLFLLDVSQIAAQS-GYLYTVCEVLLNQLKSMPGDRRTSIAIITYDSAVHFYSLAEGQTQPSQMILTDI-DDIF- 388 (912)
Q Consensus 312 ~~pp~~vFvID~s~~a~~~-g~l~~~~~si~~~L~~lp~~~~~~VglITfd~~V~~y~l~~~~~~~~~~vv~dl-~d~f- 388 (912)
..|.=.+||+|+|....+. .-++.+...|.+.|..+-.+ .||||.+|-+..- +......|. ++ +.+-
T Consensus 109 ~~pvDly~LmD~S~SM~ddi~~lk~l~~~l~~~l~~~t~~--~r~Gfgsf~Dk~~---~P~~~~~p~-----~~~~~pc~ 178 (690)
T 3fcs_B 109 DYPVDIYYLMDLSYSMKDDLWSIQNLGTKLATQMRKLTSN--LRIGFGAFVDKPV---SPYMYISPP-----EALENPCY 178 (690)
T ss_dssp TCCEEEEEEEECSGGGHHHHHHTTTTTHHHHHHHHHHCSC--EEEEEEEECCCSS---TTTSCCCST-----TTTTCTTS
T ss_pred CCCccEEEEecCCcchHHHHHHHHHHHHHHHHHHHhhCcC--ceEEeEEeecccc---CCccccChh-----hhccCCCc
Confidence 3467789999999764431 11233334555555555444 4999999955431 111000111 11 1110
Q ss_pred ------C-CCCCCcccchhHhHHHHHHHHHhCCccccCCCCCCCcHHHHHHHHH--Hhhc--CCCCEEEEEecCCCCC--
Q psy14673 389 ------L-PSPENILVNLSECYDMIVDLLKQLPGKFKDSLDSGSALGPALQAAF--KLLQ--PTGGRITIFQTCLPNR-- 455 (912)
Q Consensus 389 ------~-p~~~~~lv~l~e~~~~i~~lL~~L~~~~~~~~~~~~~~G~AL~~A~--~ll~--~~GGrI~~f~~g~pt~-- 455 (912)
. |..-+-.++|.+..+.+.+.++++. .......|+..+-+.+.+|+ .-+. ...-|||||++-.+-.
T Consensus 179 ~~~~~c~~~f~f~~~l~lt~~~~~f~~~v~~~~-isgn~D~PE~g~dAl~qa~~c~~~igWr~~a~rllv~~TDa~~H~a 257 (690)
T 3fcs_B 179 DMKTTCLPMFGYKHVLTLTDQVTRFNEEVKKQS-VSRNRDAPEGGFDAIMQATVCDEKIGWRNDASHLLVFTTDAKTHIA 257 (690)
T ss_dssp SSSSCCCCCCSEEEEEEEESCHHHHHHHHTTCC-CCCCSSSSBCHHHHHHHHHHCHHHHTCCSSSEEEEEEEESSCBCCT
T ss_pred CCCCCCCCCccceeecccCCCHHHHHHHhhcee-ccCCCCCCchHHHHHHHHhhcccccCCCCCceEEEEEECCCccccC
Confidence 0 1111123566666666667777654 22334456655655555553 3332 2245899988877754
Q ss_pred CCCcccCCCCCCC-CCCCC-CCCCCchHH--H--HHHHHHHHhhCCcEEEEEEecCCccChhhhcccc-cCCCceEEecC
Q psy14673 456 GPGALQSRENPNQ-RSNDD-PPHMNPATD--F--YKKIALECTSFYIAVDLFILNSQYVDLATLSGVS-KFSSGCIHHIP 528 (912)
Q Consensus 456 GpG~l~~~~~~~~-~~~~~-~~~~~~~~~--f--Y~~La~~~~~~~isvdlf~~s~~~~~l~~l~~l~-~~TGG~v~~~~ 528 (912)
|-|++...-.++. .-|-+ .-.+..+.. | ...|+.++.+++|.+ ||+......++.+ .|+ ..+|+.+-...
T Consensus 258 gDg~l~gi~~pnd~~chl~~~~~y~~s~~~DypSi~ql~~~l~~~~i~~-ifavt~~~~~~y~--~l~~~i~~s~v~~l~ 334 (690)
T 3fcs_B 258 LDGRLAGIVQPNDGQCHVGSDNHYSASTTMDYPSLGLMTEKLSQKNINL-IFAVTENVVNLYQ--NYSELIPGTTVGVLS 334 (690)
T ss_dssp TGGGGGTCCSCCCCCCCBCTTCBBGGGGTSCCCCHHHHHHHHHHTTCEE-EEEEEGGGHHHHH--HHHHHSTTCEEEEEC
T ss_pred CCccccceecCCCcceeecCCCccccccccCCCCHHHHHHHHHHcCCeE-EEEEeCCchhhHH--HHHhhcCCceeeeec
Confidence 6776654322221 01111 111222222 1 367888888899844 7776665555432 222 23455555544
Q ss_pred CCCCCCchhHHHHHHHHHHhhhcccccceeEEEEe-cCCceEEEE--eeceeccCCCceeeccCCCCCeEEEEEEEec
Q psy14673 529 LYSGKNMSHVYQLDRMFSRYLTRKIGFESVMRIRC-TKGMSIHTF--HGNFFVRSTDLLALPNVNPDAGYGIQISIDE 603 (912)
Q Consensus 529 ~f~~~~~~~~~~~~~~l~~~l~~~~g~~a~l~vr~-S~gl~i~~~--~G~~~~~~t~~~~l~~i~~~~si~~~~~~~~ 603 (912)
. +. .+...+..+-++.+ .-.++|+... .+|++|+-. -++... .+..-...++....++.|.+++.-
T Consensus 335 ~-dS---sni~~li~~~y~~i----~s~v~l~~~~~p~~~~v~~~s~C~~~~~-~~~~~~C~~v~~g~~v~F~v~v~~ 403 (690)
T 3fcs_B 335 M-DS---SNVLQLIVDAYGKI----RSKVELEVRDLPEELSLSFNATCLNNEV-IPGLKSCMGLKIGDTVSFSIEAKV 403 (690)
T ss_dssp T-TC---TTHHHHHHHHHHHH----TTCEEEEEESCCTTEEEEEEEECSTTCE-EETCCEECSCCTTCEEEEEEEEEE
T ss_pred c-cc---HHHHHHHHHHHHhh----hcceeeeccCCCCcceEEEEeecCCCCc-ccCCCcccccccCCeEEEEEEEEe
Confidence 3 22 12344444444433 2334444433 456655422 111110 011123445666677777776664
No 47
>1yvr_A RO autoantigen, 60-kDa SS-A/RO ribonucleoprotein, 60 kDa; heat repeat, VON willebrand factor A, rossmann fold, midas motif', RNA binding protein; 1.95A {Xenopus laevis} SCOP: a.118.25.1 c.62.1.5 PDB: 1yvp_A 2i91_A
Probab=94.43 E-value=0.064 Score=62.60 Aligned_cols=108 Identities=14% Similarity=0.189 Sum_probs=61.1
Q ss_pred CCCCcEEEEEEEccHhHHhh--c-hHHHHHHHHHHHHhcCCCCCCceEEEEEEccEEEEEEcCCCCCCCceeeccCcccc
Q psy14673 311 PPQPAMYLFLLDVSQIAAQS--G-YLYTVCEVLLNQLKSMPGDRRTSIAIITYDSAVHFYSLAEGQTQPSQMILTDIDDI 387 (912)
Q Consensus 311 ~~~pp~~vFvID~s~~a~~~--g-~l~~~~~si~~~L~~lp~~~~~~VglITfd~~V~~y~l~~~~~~~~~~vv~dl~d~ 387 (912)
++.+..++|+||+|.+.... | .+.....++...+..+..+. +||||+|++.+..
T Consensus 365 ~~~~~~v~lvvD~SgSM~~~~~~~~l~~~~~Aa~l~~~~~~~~d--~vglv~Fs~~~~~--------------------- 421 (538)
T 1yvr_A 365 EPTGKRFLLAIDVSASMNQRVLGSILNASVVAAAMCMLVARTEK--DSHMVAFSDEMLP--------------------- 421 (538)
T ss_dssp CCCCCCEEEEEECSGGGGSBSTTSSCBHHHHHHHHHHHHHHHCS--SEEEEEESSSEEC---------------------
T ss_pred CCCCceEEEEEECccccCCCCCCCcHHHHHHHHHHHHHHhccCC--ceEEEEECCCceE---------------------
Confidence 45678899999999874321 1 12221111222222222233 7999999863221
Q ss_pred CCCCCCCcccchhHhHHHHHHHHHhCCccccCCCCCCCcHHHHHHHHHHhhcCCCCEEEEEecCCCCCC
Q psy14673 388 FLPSPENILVNLSECYDMIVDLLKQLPGKFKDSLDSGSALGPALQAAFKLLQPTGGRITIFQTCLPNRG 456 (912)
Q Consensus 388 f~p~~~~~lv~l~e~~~~i~~lL~~L~~~~~~~~~~~~~~G~AL~~A~~ll~~~GGrI~~f~~g~pt~G 456 (912)
+|...+ .. +..+++.|... ...++.+|.||..|... ......||++++|..+.|
T Consensus 422 -~~~t~~--------~~-l~~~l~~l~~~----~~GgT~i~~aL~~a~~~-~~~~~~iIliTDg~~~~g 475 (538)
T 1yvr_A 422 -CPITVN--------ML-LHEVVEKMSDI----TMGSTDCALPMLWAQKT-NTAADIFIVFTDCETNVE 475 (538)
T ss_dssp -CSCCTT--------SC-HHHHHHHHTTC----CCSCCCTTHHHHHHHHT-TCCCSEEEEEECCCCCSS
T ss_pred -cCCCCc--------cc-HHHHHHHHhcC----CCCCCcHHHHHHHHHhc-cCCCCEEEEEcCCCCCCC
Confidence 111111 00 33445555432 23467889999999876 334588999999987764
No 48
>1j72_A Macrophage capping protein; actin, human, CAP G, GCAP39, MBHL, GELS structural protein; 2.50A {Homo sapiens} SCOP: d.109.1.1 d.109.1.1 d.109.1.1 PDB: 1jhw_A
Probab=93.96 E-value=0.14 Score=56.06 Aligned_cols=88 Identities=13% Similarity=0.171 Sum_probs=58.9
Q ss_pred cceeeecccCCCCCCccccCCcccCCccccccccccccCeEEEEeCCceEEEEecCCCChhHHhhccCCCCcCCCCcccc
Q psy14673 753 YPELYPIHTLDQDPTIEWNELQVPIPRILQLSAERLQATGTYLLNMPDLIIILVRHGTSPAICSGLFGFQSVAQMPETLF 832 (912)
Q Consensus 753 yP~L~~~~~~~~~~~~~~~~~~~~~P~~l~Ls~~~l~~~giyLlD~g~~i~i~vg~~v~~~~~~~lfg~~~~~~~~~~~~ 832 (912)
-++||.+..- +.+ .-..++++.++|.++.+||||+|..||+|+|+.++..-
T Consensus 135 ~~rL~~v~G~----------~~v-~~~eV~~~~~sLns~d~FIL~~~~~iy~W~G~~s~~~E------------------ 185 (347)
T 1j72_A 135 VQRLYQVKGK----------KNI-RATERALNWDSFNTGDCFILDLGQNIFAWCGGKSNILE------------------ 185 (347)
T ss_dssp EEEEEEEECS----------SSC-EEEEECSSGGGCBTTSEEEEEETTEEEEEECTTCCHHH------------------
T ss_pred CcEEEEEECC----------Cce-EEEEEeeeHHHcCCCceEEEecCCEEEEEECCCCCHHH------------------
Confidence 4789988631 001 11246688999999999999999999999999887653
Q ss_pred cCCCCchHHHHHHHHHHHHHhhc-CCCcccEEEEeCCCCcHHHHHHHh
Q psy14673 833 ELPQLETQLSLKLNSFISYLNDD-KAYVSPVKVIKDSSPDRMEFYDKL 879 (912)
Q Consensus 833 ~lp~~d~~~~~~~~~~i~~l~~~-r~~~~p~~iv~~~~~~~~~f~~~l 879 (912)
-.+.+.+...|++. |.-...+.+|.++... ..|...|
T Consensus 186 ---------r~~A~~~a~~i~~~~~~g~~~v~~v~EG~E~-~~Fw~~L 223 (347)
T 1j72_A 186 ---------RNKARDLALAIRDSERQGKAQVEIVTDGEEP-AEMIQVL 223 (347)
T ss_dssp ---------HHHHHHHHHHHHTTSCCSSCEEEEEETTCCC-HHHHHHH
T ss_pred ---------HHHHHHHHHHHHhhccCCCceEEEEeCCCCH-HHHHHHh
Confidence 13455556666532 2223457777776654 3576655
No 49
>3vi3_B Integrin beta-1; beta propeller fold, rossman fold, beta sandwich, fibronecti receptor, cell adhesion-immune system complex; HET: NAG BMA MAN; 2.90A {Homo sapiens} PDB: 3vi4_B*
Probab=93.29 E-value=2.5 Score=47.23 Aligned_cols=269 Identities=16% Similarity=0.181 Sum_probs=132.2
Q ss_pred CCCcEEEEEEEccHhHHhh-chHHHHHHHHHHHHhcCCCCCCceEEEEEEcc-EEEEEEcCCCCCCCceeeccCccccC-
Q psy14673 312 PQPAMYLFLLDVSQIAAQS-GYLYTVCEVLLNQLKSMPGDRRTSIAIITYDS-AVHFYSLAEGQTQPSQMILTDIDDIF- 388 (912)
Q Consensus 312 ~~pp~~vFvID~s~~a~~~-g~l~~~~~si~~~L~~lp~~~~~~VglITfd~-~V~~y~l~~~~~~~~~~vv~dl~d~f- 388 (912)
..|-=.+|++|+|....+. .-++.+...|.+.|..+-.+ -||||..|-+ .|.=|.- ..|. .+..+-
T Consensus 120 ~yPVDLyyLmDlS~SM~ddl~~lk~lg~~L~~~l~~~t~~--~riGfGsFvDK~v~P~~~----t~p~-----~~~nPC~ 188 (454)
T 3vi3_B 120 DYPIDLYYLMDLSYSMKDDLENVKSLGTDLMNEMRRITSD--FRIGFGSFVEKTVMPYIS----TTPA-----KLRNPCT 188 (454)
T ss_dssp CCCEEEEEEEECSGGGHHHHHHHTTHHHHHHHHHTTTCSS--EEEEEEEECCCSSTTTSC----CSTT-----TTTCCSC
T ss_pred CCceeEEEEecCCcchhhHHHHHHHHHHHHHHHHHhcCCC--eEEEEEEEeccccCCccc----CChH-----HhcCCCc
Confidence 3466689999999764431 12344445555556555444 4999999843 3221100 0111 111110
Q ss_pred ----C--CCCCCcccchhHhHHHHHHHHHhCCccccCCCCCCCcHHHHHHHHHH--hhc-CCCCEEEEEecCCCC--CCC
Q psy14673 389 ----L--PSPENILVNLSECYDMIVDLLKQLPGKFKDSLDSGSALGPALQAAFK--LLQ-PTGGRITIFQTCLPN--RGP 457 (912)
Q Consensus 389 ----~--p~~~~~lv~l~e~~~~i~~lL~~L~~~~~~~~~~~~~~G~AL~~A~~--ll~-~~GGrI~~f~~g~pt--~Gp 457 (912)
. |..-+-.+++.+..+.+.+.++++. ...+...|+..+-+-+.+|+- -+. ...-||+||++-.+- .|-
T Consensus 189 ~~~~c~~~f~fr~~l~LT~d~~~F~~~V~~~~-isGn~D~PEgg~DAl~Qaavc~~~igWR~a~rllV~~TDa~fH~agD 267 (454)
T 3vi3_B 189 SEQNCTTPFSYKNVLSLTNKGEVFNELVGKQR-ISGNLDSPEGGFDAIMQVAVCGSLIGWRNVTRLLVFSTDAGFHFAGD 267 (454)
T ss_dssp SSSCCCCCCSEEEEEEEESCHHHHHHHHTTCC-CCCCSSSSBCHHHHHHHHHHCHHHHTCCSSEEEEEEEESSCBCCTTT
T ss_pred CccCCCCCcceeeeeecCCCHHHHHHHHhhcc-ccCCCcCCchhHHHHHHHhccccccCCccceEEEEEECCCCcCcCCC
Confidence 0 1111124577776677777777753 223445666666665666642 221 115689998887775 488
Q ss_pred CcccCCCCCCC-CCCCCCCCCCchHH--H--HHHHHHHHhhCCcEEEEEEecCCccChhh-hcccccCCCceEEecCCCC
Q psy14673 458 GALQSRENPNQ-RSNDDPPHMNPATD--F--YKKIALECTSFYIAVDLFILNSQYVDLAT-LSGVSKFSSGCIHHIPLYS 531 (912)
Q Consensus 458 G~l~~~~~~~~-~~~~~~~~~~~~~~--f--Y~~La~~~~~~~isvdlf~~s~~~~~l~~-l~~l~~~TGG~v~~~~~f~ 531 (912)
|+|...-.++. .-|-+...+..+.. | ...|+.++.+++|.+ ||+.+....++++ |..+. .|+.+-.... +
T Consensus 268 gkL~GIv~PNDg~CHL~~~~Yt~s~~~DYPSv~ql~~~l~e~nI~~-IFAVt~~~~~~Y~~L~~~i--p~s~vg~Ls~-d 343 (454)
T 3vi3_B 268 GKLGGIVLPNDGQCHLENNMYTMSHYYDYPSIAHLVQKLSENNIQT-IFAVTEEFQPVYKELKNLI--PKSAVGTLSA-N 343 (454)
T ss_dssp TGGGTCCSCCCCCCCEETTEECCTTTSCCCCHHHHHHHHHHTTEEE-EEEEEGGGHHHHHHHHHHS--TTEEEEEECT-T
T ss_pred ccccceecCCCCccEeCCCcccccccCCCCCHHHHHHHHHhcCCcE-EEEEcCccchHHHHHHHhC--CCceeeEccc-c
Confidence 88765432221 01111111111111 1 467888888888755 8888777665543 22222 2333333322 2
Q ss_pred CCCchhHHHHHHHHHHhhhcccccceeEEEEe-cCCceEEEE--eeceec-cCCCceeeccCCCCCeEEEEEEEec
Q psy14673 532 GKNMSHVYQLDRMFSRYLTRKIGFESVMRIRC-TKGMSIHTF--HGNFFV-RSTDLLALPNVNPDAGYGIQISIDE 603 (912)
Q Consensus 532 ~~~~~~~~~~~~~l~~~l~~~~g~~a~l~vr~-S~gl~i~~~--~G~~~~-~~t~~~~l~~i~~~~si~~~~~~~~ 603 (912)
. ...-.|..+-++.+. -.+.|+... .+|++|.-. -++... .+...-...++....++.|..++.-
T Consensus 344 S---sNiv~LI~~aY~~i~----S~V~l~~~~~p~~l~v~y~s~C~~~~~~~~~~~~~C~~v~ig~~v~F~v~v~~ 412 (454)
T 3vi3_B 344 S---SNVIQLIIDAYNSLS----SEVILENGKLSEGVTISYKSYCKNGVNGTGENGRKCSNISIGDEVQFEISITS 412 (454)
T ss_dssp C---TTHHHHHHHHHHHHH----TCEEEEECCCCTTEEEEEEEECGGGCEEEGGGGGEECCCCTTCEEEEEEEEEE
T ss_pred c---hhHHHHHHHHHHHhh----eEEEEecCCCCCceEEEEEeecCCCCccCCccCCCCCCccCCCEEEEEEEEEe
Confidence 2 223445444444332 233343332 445655321 111110 0111124556666777777776653
No 50
>3v4v_B Integrin beta-7; cell adhesion, madcam-1, membrane; HET: NAG BMA MAN 0DU; 3.10A {Homo sapiens} PDB: 3v4p_B*
Probab=93.14 E-value=7.9 Score=43.75 Aligned_cols=272 Identities=17% Similarity=0.129 Sum_probs=131.7
Q ss_pred CCCcEEEEEEEccHhHHhhchHHHHH---HHHHHHHhcCCCCCCceEEEEEEcc-EEEEEEcCCCCCCCceee--ccCcc
Q psy14673 312 PQPAMYLFLLDVSQIAAQSGYLYTVC---EVLLNQLKSMPGDRRTSIAIITYDS-AVHFYSLAEGQTQPSQMI--LTDID 385 (912)
Q Consensus 312 ~~pp~~vFvID~s~~a~~~g~l~~~~---~si~~~L~~lp~~~~~~VglITfd~-~V~~y~l~~~~~~~~~~v--v~dl~ 385 (912)
..|-=.+|++|+|....+ .++.++ ..|...|..+-.+ -||||.+|-+ .|. ......|..+. -.+.+
T Consensus 130 ~yPVDLyyLmDlS~SM~d--dl~~lk~lg~~L~~~l~~~t~~--~RiGfGsFvDK~v~----P~~~~~p~~l~~PC~~~~ 201 (503)
T 3v4v_B 130 GYPVDLYYLMDLSYSMKD--DLERVRQLGHALLVRLQEVTHS--VRIGFGSFVDKTVL----PFVSTVPSKLRHPCPTRL 201 (503)
T ss_dssp SCCEEEEEEEECSGGGHH--HHHHHHHSSHHHHHHHTTTCSC--EEEEEEEECCCSST----TTSCCCHHHHHCCSSCSS
T ss_pred CCceeEEEEEecCcchhh--HHHHHHHHHHHHHHHHHhhCcC--cEEeeeeecccccC----CcccCCHHHhcCCCcCCC
Confidence 346678999999976443 244444 4555555555444 4999999944 321 11100111100 00000
Q ss_pred ccC-CCCCCCcccchhHhHHHHHHHHHhCCccccCCCCCCCcHHHHHHHHH--Hhhc-CCCCEEEEEecCCCC--CCCCc
Q psy14673 386 DIF-LPSPENILVNLSECYDMIVDLLKQLPGKFKDSLDSGSALGPALQAAF--KLLQ-PTGGRITIFQTCLPN--RGPGA 459 (912)
Q Consensus 386 d~f-~p~~~~~lv~l~e~~~~i~~lL~~L~~~~~~~~~~~~~~G~AL~~A~--~ll~-~~GGrI~~f~~g~pt--~GpG~ 459 (912)
+.- -|..-+-++++.+..+.+.+.+.++. ...+...|+..+.+-+.+|+ .-+. ....|++||++-.+- .|-|+
T Consensus 202 ~~c~p~f~fr~~l~LT~d~~~F~~~V~~~~-iSGnlD~PEggfDAlmQaavC~~~IgWR~a~rllV~~TDA~fH~agDgk 280 (503)
T 3v4v_B 202 ERCQSPFSFHHVLSLTGDAQAFEREVGRQS-VSGNLDSPEGGFDAILQAALCQEQIGWRNVSRLLVFTSDDTFHTAGDGK 280 (503)
T ss_dssp SCCCCCCSEEEEEEEESCSHHHHHHHTTCC-CCCCSSSSBCHHHHHHHHHHCHHHHTCCSSEEEEEEEESSCBCCTTGGG
T ss_pred CCCCCCcceEEEEEecCCHHHHHHHHhhcC-ccCCCCCCchHHHHHHHHhhcccccCCCcceEEEEEECCCCcCcCCCcc
Confidence 000 01111114566665556666666653 22344556666666566664 2221 125699999887775 47777
Q ss_pred ccCCCCCCC-CCCCC-CCCCCchHHH----HHHHHHHHhhCCcEEEEEEecCCccChhhhcccccC-CCceEEecCCCCC
Q psy14673 460 LQSRENPNQ-RSNDD-PPHMNPATDF----YKKIALECTSFYIAVDLFILNSQYVDLATLSGVSKF-SSGCIHHIPLYSG 532 (912)
Q Consensus 460 l~~~~~~~~-~~~~~-~~~~~~~~~f----Y~~La~~~~~~~isvdlf~~s~~~~~l~~l~~l~~~-TGG~v~~~~~f~~ 532 (912)
+...-.++. .-|-+ ...+..+..+ ...|+.++.+++|. =||+.+....++++ .|+.. .|+.+-.... +.
T Consensus 281 LaGIv~pNDg~CHL~~~~~Yt~s~~~DYPSv~ql~~kL~ennI~-~IFAVt~~~~~~Y~--~L~~~ip~s~vg~Ls~-dS 356 (503)
T 3v4v_B 281 LGGIFMPSDGHCHLDSNGLYSRSTEFDYPSVGQVAQALSAANIQ-PIFAVTSAALPVYQ--ELSKLIPKSAVGELSE-DS 356 (503)
T ss_dssp TTTCCSCCCSSCCBCTTSBBGGGGGSCCCCHHHHHHHHHHHTEE-EEEEECSSSHHHHH--HHHTTSTTCEEEECCT-TS
T ss_pred ccceecCCCCCeEECCCCccccccccCCCCHHHHHHHHHhcCCe-EEEEEcccchhHHH--HHHHhCCCceeeEccc-cc
Confidence 755422221 01211 1122222221 35677788888884 47888877665543 33333 3444444332 22
Q ss_pred CCchhHHHHHHHHHHhhhcccccceeEEEEe-cCCceEEEE--eecee-ccC--CCceeeccCCCCCeEEEEEEEec
Q psy14673 533 KNMSHVYQLDRMFSRYLTRKIGFESVMRIRC-TKGMSIHTF--HGNFF-VRS--TDLLALPNVNPDAGYGIQISIDE 603 (912)
Q Consensus 533 ~~~~~~~~~~~~l~~~l~~~~g~~a~l~vr~-S~gl~i~~~--~G~~~-~~~--t~~~~l~~i~~~~si~~~~~~~~ 603 (912)
...-.|..+-++.|. -.++|+... .+|++|.-. -++.. ..+ ...-...++....++.|.+++.-
T Consensus 357 ---sNiv~LI~~aY~~i~----S~V~l~~~~~p~~l~v~y~s~C~~~~~~~~~~~~~~~C~~v~ig~~v~F~v~v~~ 426 (503)
T 3v4v_B 357 ---SNVVQLIMDAYNSLS----STVTLEHSSLPPGVHISYESQCEGPEKREGKAEDRGQCNHVRINQTVTFWVSLQA 426 (503)
T ss_dssp ---CTHHHHHHHHHHHHH----TCEEEECCCCCTTEEEEBCEECSSSCCCCCCCBSSEEECSCCTTCEEEEEEEEEE
T ss_pred ---hhHHHHHHHHHHHhh----eEEEEecCCCCCceEEEEEEecCCCCccCcccccCCcccCcccCCEEEEEEEEEe
Confidence 223445444444332 223333332 456666522 11110 011 11234566777777777776664
No 51
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=91.75 E-value=0.34 Score=57.63 Aligned_cols=203 Identities=15% Similarity=0.164 Sum_probs=101.8
Q ss_pred CCCcEEEEEEEccHhHHh-hchHHHHHHHHHHHHhcCCCCCCceEEEEEEccEEEEEEcCCCCCCCceeeccCccccC--
Q psy14673 312 PQPAMYLFLLDVSQIAAQ-SGYLYTVCEVLLNQLKSMPGDRRTSIAIITYDSAVHFYSLAEGQTQPSQMILTDIDDIF-- 388 (912)
Q Consensus 312 ~~pp~~vFvID~s~~a~~-~g~l~~~~~si~~~L~~lp~~~~~~VglITfd~~V~~y~l~~~~~~~~~~vv~dl~d~f-- 388 (912)
..|.=.+||+|+|....+ -.-++.+...|...|..+-.+- ||||.+|-+..- +......| ..+..+-
T Consensus 102 ~ypvDly~LmD~S~SM~ddi~~lk~l~~~l~~~l~~~t~~~--r~GfgsFvDk~~---~P~~~~~p-----~~~~~Pc~~ 171 (687)
T 3k6s_B 102 GYPIDLYYLMDLSYSMLDDLRNVKKLGGDLLRALNEITESG--RIGFGSFVDKTV---LPFVNTHP-----DKLRNPCPN 171 (687)
T ss_dssp CCCCEEEEEEECSSTTHHHHHTTTTCCTTHHHHHHSSCCSC--EEEEEEECCCSS---TTSSCCSS-----TTTTCCCCS
T ss_pred CCceeEEEEEcCCcchHHHHHHHHHHHHHHHHHHHhhCcCc--EEeeEEeecccc---CCccccCc-----hhccCCCCC
Confidence 346778999999976432 1123334456666666665554 999999955321 11110011 1121111
Q ss_pred -----C-CCCCCcccchhHhHHHHHHHHHhCCccccCCCCCCCcHHHHHHHHH--Hhhc-CCCCEEEEEecCCCCC--CC
Q psy14673 389 -----L-PSPENILVNLSECYDMIVDLLKQLPGKFKDSLDSGSALGPALQAAF--KLLQ-PTGGRITIFQTCLPNR--GP 457 (912)
Q Consensus 389 -----~-p~~~~~lv~l~e~~~~i~~lL~~L~~~~~~~~~~~~~~G~AL~~A~--~ll~-~~GGrI~~f~~g~pt~--Gp 457 (912)
. |..-...++|.+..+.+.+.++.+. .......|+..+-+.+.||+ .-+. ...-|||||++-.+-. |-
T Consensus 172 ~~~~c~~~f~f~~~l~lt~~~~~F~~~v~~~~-isgn~D~PE~g~dAl~qa~vc~~~igWr~a~rllV~~TDa~~H~agD 250 (687)
T 3k6s_B 172 KEKECQPPFAFRHVLKLTNNSNQFQTEVGKQL-ISGNLDAPEGGLDAMMQVAACPEEIGWRNVTRLLVFATDDGFHFAGD 250 (687)
T ss_dssp CCCCCCCCCSCEEEEEEESCSHHHHHHHHTSC-CCCCSSSSCCHHHHHHHHTTCHHHHCCCSSCCEEEEECSSCCCCTTG
T ss_pred CCCCcCCcccceeecccCCCHHHHHHHHhhcc-ccCCCCCCchHHHHHHHHhhcccccCCccceEEEEEECCCccccCCC
Confidence 1 1111224566666666667777764 22334456655655555552 2332 1257899998877754 66
Q ss_pred CcccCCCCCCC-CCCCCCCCCCchHHH----HHHHHHHHhhCCcEEEEEEecCCccChhhhcccc-cCCCceEEecC
Q psy14673 458 GALQSRENPNQ-RSNDDPPHMNPATDF----YKKIALECTSFYIAVDLFILNSQYVDLATLSGVS-KFSSGCIHHIP 528 (912)
Q Consensus 458 G~l~~~~~~~~-~~~~~~~~~~~~~~f----Y~~La~~~~~~~isvdlf~~s~~~~~l~~l~~l~-~~TGG~v~~~~ 528 (912)
|+|...-.++. .-|-+...+..+..+ ...|+.++.+++|.+ ||+......++.+ .|+ ..+|+.+-...
T Consensus 251 g~l~gi~~pndg~Chl~~~~y~~s~~~DyPS~~ql~~~l~~~~I~~-ifavt~~~~~~y~--~l~~~i~~s~v~~L~ 324 (687)
T 3k6s_B 251 GKLGAILTPNDGRCHLEDNLYKRSNEFDYPSVGQLAHKLAENNIQP-IFAVTSRMVKTYE--KLTEIIPKSAVGELS 324 (687)
T ss_dssp GGGGTCCCCCCSCCCCSSSBCSSGGGSCCCCGGGHHHHHHHTTCBC-CEEECGGGHHHHH--HHHHHSSSCCEEECC
T ss_pred ccccceecCCCCccccCCCccccccccCCCCHHHHHHHHHHcCCeE-EEEEeccchhhHH--HHHhhcCCceeeeec
Confidence 76654322221 011111111111111 245777777888843 6666655555432 233 23445555443
No 52
>3fg6_A Adseverin, scinderin; C-terminus of adseverin, actin capping, actin-binding, cytos phosphoprotein, actin-binding protein; 3.00A {Homo sapiens}
Probab=91.69 E-value=0.51 Score=52.06 Aligned_cols=52 Identities=17% Similarity=0.264 Sum_probs=38.7
Q ss_pred cceeeecccCCCCCCccccCCcccCCccccccccccccCeEEEEeCC-ceEEEEecCCCChh
Q psy14673 753 YPELYPIHTLDQDPTIEWNELQVPIPRILQLSAERLQATGTYLLNMP-DLIIILVRHGTSPA 813 (912)
Q Consensus 753 yP~L~~~~~~~~~~~~~~~~~~~~~P~~l~Ls~~~l~~~giyLlD~g-~~i~i~vg~~v~~~ 813 (912)
-++||.+..-.. . ...-..++++.++|.++.+||||+| ..||+|+|+..+..
T Consensus 165 ~~rL~~vrg~~~--------~-~vr~~EV~~~~ssLns~d~FILd~~~~~iyvW~G~~ss~~ 217 (371)
T 3fg6_A 165 PTRLFQVRRNLA--------S-ITRIVEVDVDANSLNSNDVFVLKLPQNSGYIWVGKGASQE 217 (371)
T ss_dssp CCEEEEEECCSS--------S-CCEEEEECSSGGGCBTTSEEEEECTTSEEEEEECTTCCHH
T ss_pred ccEEEEEeccCC--------C-ceEEEEecCCHHHccCCCeEEEEcCCCeEEEEECCCCCHH
Confidence 579999973110 0 0111236688999999999999999 99999999988754
No 53
>1d0n_A Horse plasma gelsolin; mixed alpha-beta structure, actin-binding protein, protein D packing, contractIle protein; 2.50A {Equus caballus} SCOP: d.109.1.1 d.109.1.1 d.109.1.1 d.109.1.1 d.109.1.1 d.109.1.1 PDB: 2fgh_A* 3ffn_A 3ffk_A* 1rgi_G*
Probab=91.66 E-value=0.36 Score=58.31 Aligned_cols=88 Identities=13% Similarity=0.136 Sum_probs=58.3
Q ss_pred cceeeecccCCCCCCccccCCcccCCccccccccccccCeEEEEeCCceEEEEecCCCChhHHhhccCCCCcCCCCcccc
Q psy14673 753 YPELYPIHTLDQDPTIEWNELQVPIPRILQLSAERLQATGTYLLNMPDLIIILVRHGTSPAICSGLFGFQSVAQMPETLF 832 (912)
Q Consensus 753 yP~L~~~~~~~~~~~~~~~~~~~~~P~~l~Ls~~~l~~~giyLlD~g~~i~i~vg~~v~~~~~~~lfg~~~~~~~~~~~~ 832 (912)
.|+||.+..-. . ..-..++++.++|.++.+||||+|..||+|.|+..+..-
T Consensus 133 ~~rL~~vkG~~----------~-v~~~eV~~s~~SLns~DvFILd~g~~iy~W~G~~s~~~E------------------ 183 (729)
T 1d0n_A 133 VQRLLQVKGRR----------V-VRATEVPVSWESFNNGDCFILDLGNNIYQWCGSKSNRFE------------------ 183 (729)
T ss_dssp CCEEEEEECSS----------S-CEEEEECSSGGGCCSSSEEEEECSSEEEEEECTTCCHHH------------------
T ss_pred CcEEEEEECCC----------c-EEEEEEeccHHHcCCCCeEEEEcCCEEEEEECCCCCHHH------------------
Confidence 58999887310 0 112346789999999999999999999999999877542
Q ss_pred cCCCCchHHHHHHHHHHHHHhh-cCCCcccEEEEeCCCCcHHHHHHHh
Q psy14673 833 ELPQLETQLSLKLNSFISYLND-DKAYVSPVKVIKDSSPDRMEFYDKL 879 (912)
Q Consensus 833 ~lp~~d~~~~~~~~~~i~~l~~-~r~~~~p~~iv~~~~~~~~~f~~~l 879 (912)
-.+.+.+...|+. .|.-...+.+|.++... ..|...|
T Consensus 184 ---------r~kA~~~a~~i~~~er~g~~~i~~v~Eg~e~-~eFw~~L 221 (729)
T 1d0n_A 184 ---------RLKATQVSKGIRDNERSGRAQVSVFEEGAEP-EAMLQVL 221 (729)
T ss_dssp ---------HHHHHHHHHHHHHHSGGGCSEEEEEETTCCC-HHHHHHH
T ss_pred ---------HHHHHHHHHHHhhhhcCCCccEEEecCCCCh-HHHHHHc
Confidence 1345556666653 33222456777666533 4676555
No 54
>2fh1_A Gelsolin; calcium, contractIle protein; 1.55A {Homo sapiens} SCOP: d.109.1.1 d.109.1.1 d.109.1.1 PDB: 1p8x_A 2fh2_A 2fh3_A 2fh4_A 1h1v_G* 1nph_A
Probab=90.77 E-value=0.48 Score=51.74 Aligned_cols=52 Identities=17% Similarity=0.231 Sum_probs=38.5
Q ss_pred cceeeecccCCCCCCccccCCcccCCccccccccccccCeEEEEeCCceEEEEecCCCChh
Q psy14673 753 YPELYPIHTLDQDPTIEWNELQVPIPRILQLSAERLQATGTYLLNMPDLIIILVRHGTSPA 813 (912)
Q Consensus 753 yP~L~~~~~~~~~~~~~~~~~~~~~P~~l~Ls~~~l~~~giyLlD~g~~i~i~vg~~v~~~ 813 (912)
-++||.+..-.. +.+ .-..++++.++|.++.+||||+|..||+|+|+..+..
T Consensus 124 ~~rL~~v~g~~~--------~~~-~~~eV~~~~ssLns~d~FIL~~~~~iyvW~G~~s~~~ 175 (344)
T 2fh1_A 124 STRLFQVRANSA--------GAT-RAVEVLPKAGALNSNDAFVLKTPSAAYLWVGTGASEA 175 (344)
T ss_dssp SSEEEEEEECTT--------CCE-EEEEECCSGGGCBTTSEEEEECSSCEEEEECTTCCHH
T ss_pred CceEEEEECCCC--------Cce-EEEEecCchhhcCCCceEEEecCCEEEEEECCCCCHH
Confidence 578999873110 001 1123568899999999999999999999999988764
No 55
>2nvo_A RO sixty-related protein, RSR; alpha helical repeats, VON willebrand factor A domain, beta- RNA binding protein; 1.89A {Deinococcus radiodurans}
Probab=88.00 E-value=0.69 Score=53.73 Aligned_cols=108 Identities=12% Similarity=0.104 Sum_probs=60.2
Q ss_pred CCCCcEEEEEEEccHhHHhhch-----HHHHHHHHHHHHhcCCCCCCceEEEEEEccEEEEEEcCCCCCCCceeeccCcc
Q psy14673 311 PPQPAMYLFLLDVSQIAAQSGY-----LYTVCEVLLNQLKSMPGDRRTSIAIITYDSAVHFYSLAEGQTQPSQMILTDID 385 (912)
Q Consensus 311 ~~~pp~~vFvID~s~~a~~~g~-----l~~~~~si~~~L~~lp~~~~~~VglITfd~~V~~y~l~~~~~~~~~~vv~dl~ 385 (912)
++.+-.++++||+|.+....+. +..+.-+..-++-.+..+. +||||+|++.+....+.
T Consensus 359 ~~~~~~~lv~vDvSgSM~~~~~~~~~k~~~~e~Aa~la~~~~r~~d--~v~lv~Fs~~~~~~~~~--------------- 421 (535)
T 2nvo_A 359 QPANTRHLLALDVSGSMTCGDVAGVPGLTPNMAAAAMSLIALRTEP--DALTMGFAEQFRPLGIT--------------- 421 (535)
T ss_dssp CCCCSEEEEEECCSGGGGSCCGGGCTTCCHHHHHHHHHHHHHHHSS--EEEEEEEBSSEEECCCC---------------
T ss_pred CCCCceEEEEEECCccccCCCCCCCCcccHHHHHHHHHHHHcCcCC--ceEEEEECCcceEcCCC---------------
Confidence 4567789999999986432011 1111111111222222344 89999998754321110
Q ss_pred ccCCCCCCCcccchhHhHHHHHHHHHhCCccccCCCCCCCcHHHHHHHHHHhhcCCCCEEEEEecCCCCCC
Q psy14673 386 DIFLPSPENILVNLSECYDMIVDLLKQLPGKFKDSLDSGSALGPALQAAFKLLQPTGGRITIFQTCLPNRG 456 (912)
Q Consensus 386 d~f~p~~~~~lv~l~e~~~~i~~lL~~L~~~~~~~~~~~~~~G~AL~~A~~ll~~~GGrI~~f~~g~pt~G 456 (912)
++ +.|..+|+.|.... ..++.++.||..|..... ...+||++++|--+.|
T Consensus 422 ------~~----------~~l~~~l~~l~~~~----~ggTdi~~~l~~a~~~~~-~~~~vIliTD~~~~~g 471 (535)
T 2nvo_A 422 ------PR----------DTLESAMQKAQSVS----FGGTDCAQPILWAAQERL-DVDTFVVYTDNETWAG 471 (535)
T ss_dssp ------TT----------CCHHHHHHHTCCSS----BCCCCTTHHHHHHHHTTC-CCSEEEEEESSCCCCC
T ss_pred ------cc----------hhHHHHHHHHhhCC----CCCccHHHHHHHHHHhcC-CCCEEEEEeCCCccCC
Confidence 00 11334566665321 246778888888766543 4588999999876665
No 56
>2iue_A Pactolus I-domain; membrane protein, CD, ITC, limbs, midas, admidas, membrane, integrin, titration, rossman fold, cell adhesion, transmembrane; NMR {Mus musculus}
Probab=80.00 E-value=5.4 Score=40.03 Aligned_cols=46 Identities=17% Similarity=0.114 Sum_probs=29.3
Q ss_pred CcEEEEEEEccHhHHhhchHHHHHHHHHHH---HhcCCCCCCceEEEEEEccE
Q psy14673 314 PAMYLFLLDVSQIAAQSGYLYTVCEVLLNQ---LKSMPGDRRTSIAIITYDSA 363 (912)
Q Consensus 314 pp~~vFvID~s~~a~~~g~l~~~~~si~~~---L~~lp~~~~~~VglITfd~~ 363 (912)
|-=.+||+|+|.+... .++.+++.+... |+.+.. +.||||++|-..
T Consensus 3 pvDl~fl~D~S~SM~~--di~~lk~~~~~l~~~l~~~~~--~~r~Gfg~f~Dk 51 (212)
T 2iue_A 3 SVDLYFLMGLSGSAQG--HLSNVQTLGSDLLKALNEISR--SGRIGFGSIVNM 51 (212)
T ss_dssp CEEEEEEEECCGGGTT--THHHHHHHHHHHHHHHHHHCS--CEEEEEEEESSS
T ss_pred ceEEEEEEeCCCcchh--HHHHHHHHHHHHHHHHHhhCc--CceEEEEEEEcC
Confidence 4557999999986433 355555555444 444433 459999999443
No 57
>2yrc_A Protein transport protein SEC23A; zinc binding, copii, coat protein complex-II, endoplasmic reticulum, golgi, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yrd_A
Probab=76.72 E-value=0.87 Score=35.81 Aligned_cols=19 Identities=5% Similarity=-0.003 Sum_probs=16.9
Q ss_pred CcCccCcccccCCCCCCCC
Q psy14673 267 NLPEIHEQFLYDRNTEMFG 285 (912)
Q Consensus 267 ~~~~~p~~~~~~~~~~~~~ 285 (912)
+.|.|++|+..|.++..|.
T Consensus 32 ~~W~C~~C~~~N~~P~~Y~ 50 (59)
T 2yrc_A 32 KLWACNFCYQRNQFPPSYA 50 (59)
T ss_dssp TEEECSSSCCEEECCSCCS
T ss_pred CEEEcccCCCcCCCCHHHh
Confidence 7899999999998888875
No 58
>3fg7_A Villin-1; actin binding protein, gelsolin, actin capping, actin-binding, calcium, cytoplasm, cytoskeleton, structural protein; 2.00A {Homo sapiens} PDB: 2llf_A
Probab=69.97 E-value=0.92 Score=50.44 Aligned_cols=34 Identities=15% Similarity=0.200 Sum_probs=0.0
Q ss_pred cccccccccccCeEEEEeCCceEEEEecCCCChh
Q psy14673 780 ILQLSAERLQATGTYLLNMPDLIIILVRHGTSPA 813 (912)
Q Consensus 780 ~l~Ls~~~l~~~giyLlD~g~~i~i~vg~~v~~~ 813 (912)
.++++.++|.++.+||||+|..||+|+|+..+..
T Consensus 196 EV~~s~sSLns~d~FILd~~~~iyvW~G~~ss~~ 229 (398)
T 3fg7_A 196 EVPARANFLNSNDVFVLKTQSCCYLWCGKGCSGD 229 (398)
T ss_dssp ----------------------------------
T ss_pred EecCCHHHccCCceEEEEeCCeEEEEeCCCCCHH
Confidence 3568999999999999999999999999987654
No 59
>3rag_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tructural genomics; 1.80A {Alicyclobacillus acidocaldarius subsp}
Probab=63.91 E-value=11 Score=38.41 Aligned_cols=63 Identities=14% Similarity=0.117 Sum_probs=48.1
Q ss_pred CCCEEEEEecCCCCCCCCcccCCCCCCCCCCCCCCCCCchHHHHHHHHHHHhhCCcEEEEEEecC-C---ccChhhhccc
Q psy14673 441 TGGRITIFQTCLPNRGPGALQSRENPNQRSNDDPPHMNPATDFYKKIALECTSFYIAVDLFILNS-Q---YVDLATLSGV 516 (912)
Q Consensus 441 ~GGrI~~f~~g~pt~GpG~l~~~~~~~~~~~~~~~~~~~~~~fY~~La~~~~~~~isvdlf~~s~-~---~~~l~~l~~l 516 (912)
..-.||++++|--|.|.. -.+.|..|.+.||.|..+.+.. + ..|..+|..+
T Consensus 9 ~~k~iillTDG~~~~g~~-------------------------p~~aa~~a~~~gi~v~tIGig~~~~~~~~~~~~L~~I 63 (242)
T 3rag_A 9 TIRQILVITDGCSNIGPD-------------------------PVEAARRAHRHGIVVNVIGIVGRGDAGEQGYQEAHSI 63 (242)
T ss_dssp CEEEEEEEESSCCCSSSC-------------------------HHHHHHHHHHTTCEEEEEEECCSSSCTTCCCHHHHHH
T ss_pred CccEEEEEccCCCCCCCC-------------------------HHHHHHHHHHCCCEEEEEEecCCccccchhHHHHHHH
Confidence 445677888887676621 1467888999999999999843 3 3467899999
Q ss_pred ccCCCceEEecC
Q psy14673 517 SKFSSGCIHHIP 528 (912)
Q Consensus 517 ~~~TGG~v~~~~ 528 (912)
|..|||..+...
T Consensus 64 A~~tGG~yf~a~ 75 (242)
T 3rag_A 64 ADAGGGMCRIVQ 75 (242)
T ss_dssp HHHTTSCEEEEC
T ss_pred HHhcCCeEEEee
Confidence 999999998874
No 60
>1b3t_A Protein (nuclear protein EBNA1); protein-DNA complex, DNA-binding, activator, origin-binding protein, protein/DNA complex; HET: DNA; 2.20A {Human herpesvirus 4} SCOP: d.58.8.1 PDB: 1vhi_A
Probab=52.75 E-value=31 Score=30.80 Aligned_cols=33 Identities=9% Similarity=0.273 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHhcCCC-CCCceEEEEEEccEEE
Q psy14673 333 LYTVCEVLLNQLKSMPG-DRRTSIAIITYDSAVH 365 (912)
Q Consensus 333 l~~~~~si~~~L~~lp~-~~~~~VglITfd~~V~ 365 (912)
.+.++++|++.+-.-|. .++++|-+++||..|-
T Consensus 112 Ae~~kDAi~Dyi~t~P~PT~~~~VtvcsFdd~V~ 145 (147)
T 1b3t_A 112 AEVLKDAIKDLVMTKPAPTCNIRVTVCSFDDGVD 145 (147)
T ss_dssp HHHHHHHHHHHHHTSCTTGGGEEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHhCCCCCCcceEEEEEeCCCCcc
Confidence 45799999999977765 4678999999998763
Done!