RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy14676
(1827 letters)
>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1
(Tip120) {Human (Homo sapiens) [TaxId: 9606]}
Length = 1207
Score = 419 bits (1076), Expect = e-124
Identities = 410/1269 (32%), Positives = 604/1269 (47%), Gaps = 124/1269 (9%)
Query: 547 LALLRELMTSSDKDFRFMATNDLMSELQKDSIKLDDDSERKVVKMLLRLLEDKNGEVQNL 606
++ L E MTSSDKDFRFMATNDLM+ELQKDSIKLDDDSERKVVKM+L+LLEDKNGEVQNL
Sbjct: 5 ISNLLEKMTSSDKDFRFMATNDLMTELQKDSIKLDDDSERKVVKMILKLLEDKNGEVQNL 64
Query: 607 AVKCLGPLFKALTKIAASPLRIDLRPILTDGIPILGSFLRKNQRALKLSTLLLLDTLLVN 666
AVKCLGPL + + + L + L + + L T++
Sbjct: 65 AVKCLGPLVSKVKEYQVETIVDTLCTNMLSDKEQLRD-----------ISSIGLKTVIGE 113
Query: 667 YPSAISTEMLNKVTVE------LAPLVSESDLHIAQLTLTLLTSIAKIQPNALVEPAAAS 720
P A S L + + + + D+ + L ++ + Q L S
Sbjct: 114 LPPASSGSALAANVCKKITGRLTSAIAKQEDVSVQLEALDIMADMLSRQGGLL-VNFHPS 172
Query: 721 ILPQVLQIAKSP--LLQGAALTSMLEFFKSLVLAELPGLSFSELLNMLIAPVMTGTALHK 778
IL +L SP ++ + ++ ++ + F +L+ L++ +
Sbjct: 173 ILTCLLPQLTSPRLAVRKRTIIAL-----GHLVMSCGNIVFVDLIEHLLSELSKND--SM 225
Query: 779 QAFHSLAKCVAALAITVQREALP----VVEKFLKELKTNKDDAHQVTIVALSHLVMSCNL 834
+ +C+AA++ ++ +K + D+ + I A V C
Sbjct: 226 STTRTYIQCIAAISRQAGHRIGEYLEKIIPLVVKFCNVDDDELREYCIQAFESFVRRCPK 285
Query: 835 QLTIVALSHLVMSCNLQLYTKLIDFLLEGLTTNKSTSTNRTYIQCFAAICRQAGHRFAEH 894
++ + +I+ L+ LT + + + + +
Sbjct: 286 EVY-------------PHVSTIINICLKYLTYDPNYNYDDE-----DEDENAMDADGGDD 327
Query: 895 IERVMPLILKYSREEDDELREFCLQACEAFVQRCPKEITPHIQSIGRHTDLTSVADLKQV 954
++ + ++R + +A V + + +++ + V
Sbjct: 328 DDQGSDDEYSDDDDMSWKVRRAAAKCLDAVVSTRHEMLPEFYKTVSPALISRFKEREENV 387
Query: 955 ILNAFTPTSEEVKSAASYTLGSIAEIISWQSTSTSGVAQLQQFVPAIWAQLFLHCECQEE 1014
+ F +K + S + + LQ VP I L + +
Sbjct: 388 KADVFHAYLSLLKQTRP--VQSWLCDPDAMEQGETPLTMLQSQVPNIVKALHKQMKEKSV 445
Query: 1015 GTRNVVAECLGKLTLIDPSNLLPRLQESLKSNSALMRTTHQSNQTFNVIIQRNDIHNHNE 1074
TR L +L + P L + + + S+ + + N
Sbjct: 446 KTRQCCFNMLTELVNVLPGALTQHIPVLVPGIIFSLNDKSSSSNLKIDALSCLYVILCNH 505
Query: 1075 ETSFIYSFYYFLLSPVIASVGDNFYKITAEALLVLQQFVKVIRPLTSPSSYDFAPFTSDI 1134
+ L+ PV+A VGD FYKIT+EALLV QQ VKVIRPL PSS+D P+ D+
Sbjct: 506 SPQVFHPHVQALVPPVVACVGDPFYKITSEALLVTQQLVKVIRPLDQPSSFDATPYIKDL 565
Query: 1135 YQCTLVRLKAADIDQEVKERAISCMGQIICNLGDYLKSELPVCLPILLDRLRNEITRLTT 1194
+ CT+ RLKAADIDQEVKERAISCMGQIICNLGD L S+LP L I L+RL+NEITRLTT
Sbjct: 566 FTCTIKRLKAADIDQEVKERAISCMGQIICNLGDNLGSDLPNTLQIFLERLKNEITRLTT 625
Query: 1195 VKALTKIAASPLRIDLRPILTDGIPILGSFLRKNQRALKLSTLLLLDTLLVNYPSAISTE 1254
VKALT IA SPL+IDLRP+L +G+PIL SFLRKNQRALKL TL LD L+ NY +++
Sbjct: 626 VKALTLIAGSPLKIDLRPVLGEGVPILASFLRKNQRALKLGTLSALDILIKNYSDSLTAA 685
Query: 1255 MLNKVTVELAPLVSESDLHIAQLTLTLLTSIAKIQP-----------NALVEPAAASILP 1303
M++ V EL PL+SESD+H++Q+ ++ LT++AK+ P N L+ + +L
Sbjct: 686 MIDAVLDELPPLISESDMHVSQMAISFLTTLAKVYPSSLSKISGSILNELIGLVRSPLLQ 745
Query: 1304 QIGRHTDLTSVA-------------DLKQVILNAFTPTSEEVKSAASYTLGSIAVGNLQQ 1350
L DL +++ S + SY + V L +
Sbjct: 746 GGALSAMLDFFQALVVTGTNNLGYMDLLRMLTGPVYSQSTALTHKQSYYSIAKCVAALTR 805
Query: 1351 YVPFVLKEIENQPKRQYLLLHSLKEIISWQSTSTSGVAQ--LQQFVPAIWAQLFLHCECQ 1408
P + Q + S I S V + + +
Sbjct: 806 ACPKEGPAVVGQFIQDVKNSRSTDSIRLLALLSLGEVGHHIDLSGQLELKSVILEAFSSP 865
Query: 1409 EEGTRNVVAECLGKLTLIDPSNLLPRLQESLKSNSALMRTTVLTAVKFTISDQMTSSDKD 1468
E ++ + LG +++ + LP + + + S
Sbjct: 866 SEEVKSAASYALGSISVGNLPEYLPFVLQEITS------------------------QPK 901
Query: 1469 FRFMATNDLMSELQKDSIKLDDDSERKVVKMLLRLLEDKNGEVQNLAVKCLGPLVNKVKE 1528
+++ + L + S+ + +LL+ E +N+ +CLG L
Sbjct: 902 RQYLLLHSLKEIISSASVVGLKPYVENIWALLLKHCECAEEGTRNVVAECLGKLTL---- 957
Query: 1529 FQVETIVDALCSNMVSDKEQLRDISSIGLKTVIS------------VVYCLGDRNSSSNM 1576
ET++ L ++S R +K IS + ++
Sbjct: 958 IDPETLLPRLKGYLISGSSYARSSVVTAVKFTISDHPQPIDPLLKNCIGDFLKTLEDPDL 1017
Query: 1577 KIDTLAFTHTLLTT--HPPAVFHPHIHILLPPVI----IIKTLIREVEMGPFKHTVDDGL 1630
+ +A T + + P++ + +LP + + K LIREVEMGPFKHTVDDGL
Sbjct: 1018 NVRRVALV-TFNSAAHNKPSLIRDLLDTVLPHLYNETKVRKELIREVEMGPFKHTVDDGL 1076
Query: 1631 DIRKAAFECMYTLLDTCLDRVDMFEFLNHLESGLRDHYDIKMLTYLMLARLAQMTPAALL 1690
DIRKAAFECMYTLLD+CLDR+D+FEFLNH+E GL+DHYDIKMLT+LML RL+ + P+A+L
Sbjct: 1077 DIRKAAFECMYTLLDSCLDRLDIFEFLNHVEDGLKDHYDIKMLTFLMLVRLSTLCPSAVL 1136
Query: 1691 QRLERIVEPLRNTVTLKVKANSVKQEYEKQDELKRSAMRAVAALLTIQDADKNPALNDFV 1750
QRL+R+VEPLR T T KVKANSVKQE+EKQDELKRSAMRAVAALLTI +A+K+P +++F
Sbjct: 1137 QRLDRLVEPLRATCTTKVKANSVKQEFEKQDELKRSAMRAVAALLTIPEAEKSPLMSEFQ 1196
Query: 1751 ATIKNSPEL 1759
+ I ++PEL
Sbjct: 1197 SQISSNPEL 1205
Score = 265 bits (678), Expect = 6e-73
Identities = 296/969 (30%), Positives = 453/969 (46%), Gaps = 45/969 (4%)
Query: 1 MVSDKEQLRDISSIGLKTVISELPLGS--NALAANVCRRITGKLSTAIEKQEDVSVQLEA 58
M+SDKEQLRDISSIGLKTVI ELP S +ALAANVC++ITG+L++AI KQEDVSVQLEA
Sbjct: 92 MLSDKEQLRDISSIGLKTVIGELPPASSGSALAANVCKKITGRLTSAIAKQEDVSVQLEA 151
Query: 59 LDILSDLLSRFGALLPSFHFVILTALLPQLSSPRQAVRKRTIVALSHLVMSCNLQLYTKL 118
LDI++D+LSR G LL +FH ILT LLPQL+SPR AVRKRTI+AL HLVMSC ++ L
Sbjct: 152 LDIMADMLSRQGGLLVNFHPSILTCLLPQLTSPRLAVRKRTIIALGHLVMSCGNIVFVDL 211
Query: 119 IDFLLEGLTTNKSTSTNRTYIQCFAAICRQAGHRFAEHIERVMPLILKYSREEDDELREF 178
I+ LL L+ N S ST RTYIQC AAI RQAGHR E++E+++PL++K+ +DDELRE+
Sbjct: 212 IEHLLSELSKNDSMSTTRTYIQCIAAISRQAGHRIGEYLEKIIPLVVKFCNVDDDELREY 271
Query: 179 CLQACEAFVQRCPKEITPHIQSITELCLTYITYDPNYNYEDEEEGLGGEGGGEGMDTEEE 238
C+QA E+FV+RCPKE+ PH+ +I +CL Y+TYDPNYNY+DE+E +
Sbjct: 272 CIQAFESFVRRCPKEVYPHVSTIINICLKYLTYDPNYNYDDEDEDE-------NAMDADG 324
Query: 239 DGEDEGEDDNEYSDDDDMSWKVRRAAAKCLEAIIATRRDLIGDMYRLVSPPLIARFKERE 298
+D+ D+EYSDDDDMSWKVRRAAAKCL+A+++TR +++ + Y+ VSP LI+RFKERE
Sbjct: 325 GDDDDQGSDDEYSDDDDMSWKVRRAAAKCLDAVVSTRHEMLPEFYKTVSPALISRFKERE 384
Query: 299 ENVKSDIFHAYMALLKGTRTFSPLTPSDPNQMDQEDSPLCLLSTQVPSLVKALQCQLREK 358
ENVK+D+FHAY++LLK TR DP+ M+Q ++PL +L +QVP++VKAL Q++EK
Sbjct: 385 ENVKADVFHAYLSLLKQTRPVQSWL-CDPDAMEQGETPLTMLQSQVPNIVKALHKQMKEK 443
Query: 359 SIRTRQDCLALLRELVQTLPGCLAPSLPALIPDV-TSVAEWDEEEGLGGEGGGEGMDTEE 417
S++TRQ C +L ELV LPG L +P L+P + S+ + L +
Sbjct: 444 SVKTRQCCFNMLTELVNVLPGALTQHIPVLVPGIIFSLNDKSSSSNLKIDALSCLYVILC 503
Query: 418 EDGEDEGEDDNEYSDD------DDMSWKVRRAAAKCLEAIIATRRDLIGDMYRLVSPPLI 471
+ D +K+ A + ++ R L +P +
Sbjct: 504 NHSPQVFHPHVQALVPPVVACVGDPFYKITSEALLVTQQLVKVIRPLDQPSSFDATPYIK 563
Query: 472 ARFKEREENVKSDIFHA----------YMALLKGTRTFSPLTPSDPNQMDQEDSPVCLLS 521
F + +K+ + P+ +
Sbjct: 564 DLFTCTIKRLKAADIDQEVKERAISCMGQIICNLGDNLGSDLPNTLQIFLERLKNEITRL 623
Query: 522 TQVPSLVKALQCQLREKSIRTRQDCLALLRELMTSSDKDFRFMATNDLMSELQKDSIKLD 581
T V +L L+ + + +L + + + + + L ++ S L
Sbjct: 624 TTVKALTLIAGSPLKIDLRPVLGEGVPILASFLRKNQRALKLGTLSALDILIKNYSDSLT 683
Query: 582 DDSERKVVKMLLRLLEDKNGEVQNLAVKCLGPLFKALTKIAASPLRIDLRPILTDGIPIL 641
V+ L L+ + + V +A+ L L K + L ++ L
Sbjct: 684 AAMIDAVLDELPPLISESDMHVSQMAISFLTTLAKVYPSSLSKISGSILNELIGLVRSPL 743
Query: 642 GSFLRKNQRALKLSTLLLLDTLLVNYPSAISTEMLNKVTVELAPLVSESDLHIAQLTLTL 701
AL ++ + ++L +T + + + ++
Sbjct: 744 -----LQGGALSAMLDFFQALVVTGTNNLGYMDLLRMLTGPVYSQSTALTHKQSYYSIAK 798
Query: 702 LTSIAKIQPNALVEPAAASILPQVLQIAKSPLLQGAALTSMLEFFKSLVLAELPGLSFSE 761
+ + V + ++ AL S+ E + L+ L S
Sbjct: 799 CVAALTRACPKEGPAVVGQFIQDVKNSRSTDSIRLLALLSLGEVGHHIDLSGQLEL-KSV 857
Query: 762 LLNMLIAPVMTGTALHKQAFHSLAKCVAALAI-----------TVQREALPVVEKFLKEL 810
+L +P + A S++ + Q L +++ +
Sbjct: 858 ILEAFSSPSEEVKSAASYALGSISVGNLPEYLPFVLQEITSQPKRQYLLLHSLKEIISSA 917
Query: 811 KTNKDDAHQVTIVALSHLVMSCNLQLTIVALSHLVMSCNLQLYTKLIDFLLEGLTTNKST 870
+ I AL C + T ++ + L L+ L L + S+
Sbjct: 918 SVVGLKPYVENIWALLLKHCECAEEGTRNVVAECLGKLTLIDPETLLPRLKGYL-ISGSS 976
Query: 871 STNRTYIQCFAAICRQAGHRFAEHIERVMPLILKYSREEDDELREFCLQACEAFVQRCPK 930
+ + ++ + LK + D +R L + P
Sbjct: 977 YARSSVVTAVKFTISDHPQPIDPLLKNCIGDFLKTLEDPDLNVRRVALVTFNSAAHNKPS 1036
Query: 931 EITPHIQSI 939
I + ++
Sbjct: 1037 LIRDLLDTV 1045
Score = 179 bits (454), Expect = 7e-46
Identities = 201/1128 (17%), Positives = 374/1128 (33%), Gaps = 128/1128 (11%)
Query: 434 DDMSWKVRRAAAKCLEAIIATRRDLIGDMYRLVSPPLIARFKEREENVKSDIFHAYMALL 493
+D + +V+ A KCL +++ ++ + L +E ++ L
Sbjct: 55 EDKNGEVQNLAVKCLGPLVSKVKE---YQVETIVDTLCTNMLSDKEQLRD----ISSIGL 107
Query: 494 KGTRTFSPLTPSDPNQMDQEDSPVCLLSTQVPSLVKALQCQLREKSIRTRQDCLALLREL 553
K P S + L A+ +++ + + + L ++ ++
Sbjct: 108 KTVIGELPPASSGSALAAN------VCKKITGRLTSAIA---KQEDVSVQLEALDIMADM 158
Query: 554 MTSSDKDFRFMATNDLMSELQKDSIKLDDDSERKVVKMLLRLLEDKNGEVQNLAVKCLGP 613
++ + ++ LL L V+ + LG
Sbjct: 159 LSRQGGLL--------------------VNFHPSILTCLLPQLTSPRLAVRKRTIIALGH 198
Query: 614 LFKALTKIAASPLRIDLRPILTDGIPILGSFLRKNQRALKLSTLLLLDTLLVNYPSAIST 673
L + I L L L + + + + + + + I
Sbjct: 199 LVMSCGNIVFVDLIEHL----------LSELSKNDSMSTTRTYIQCIAAISRQAGHRIGE 248
Query: 674 EMLNKVTVELAPLVSESDLHIAQLTLTLLTSIAKIQPNALVEPAAASILPQVLQIAKSPL 733
+ + + + + D + + + S + P V P ++I+ L+
Sbjct: 249 YLEKIIPLVVK-FCNVDDDELREYCIQAFESFVRRCPK-EVYPHVSTIINICLKYLTYDP 306
Query: 734 LQGAALTSMLEFFKSLVLAELPGLSFSELLNMLIAPVMTGTALHKQAFHSLAKCVAALAI 793
E + + + + ++ +
Sbjct: 307 NYNYDDEDEDENAMDADGGDDDDQGSDDEYSDDDDMSWKVRRAAAKCLDAVVSTRHEMLP 366
Query: 794 TVQREALPVVEKFLKELKTNKDDAHQVTIVALSHLVMSCNLQLTIVALSHLVMSCNLQLY 853
+ P + KE + N ++L L + L
Sbjct: 367 EFYKTVSPALISRFKEREENVKADVFHAYLSLLKQTRPVQSWLCDPDAMEQGETPLTMLQ 426
Query: 854 TKLIDFL--LEGLTTNKSTSTNRTYIQCFAAICRQAGHRFAEHIERVMPLILKYSRE--E 909
+++ + + L KS T + + +HI ++P I+ +
Sbjct: 427 SQVPNIVKALHKQMKEKSVKTRQCCFNMLTELVNVLPGALTQHIPVLVPGIIFSLNDKSS 486
Query: 910 DDELREFCLQACEAFVQRCPKEITPHIQSIGRHTDLTSVADLKQVILNAFTPTSEEVKSA 969
L+ L + ++ + ++ S
Sbjct: 487 SSNLKIDALSCLYVILCNHSPQVFHPHVQALVPPV-----------VACVGDPFYKITSE 535
Query: 970 ASYTLGSIAEIIS--WQSTSTSGVAQLQQFVPAIWAQLFLHCECQEEGTRNVVAECLGKL 1027
A + ++I Q +S ++ +L QE R +
Sbjct: 536 ALLVTQQLVKVIRPLDQPSSFDATPYIKDLFTCTIKRLKAADIDQEVKERAISCMG---- 591
Query: 1028 TLIDPSNLLPRLQESLKSNSALMRTTHQSNQTFNVIIQRNDIHNHNEETSFIYSFYYFLL 1087
NL L L + + ++ T ++ + + + +
Sbjct: 592 --QIICNLGDNLGSDLPNTLQIFLERLKNEITRLTTVKALTLIAGSPLKIDLRPVLGEGV 649
Query: 1088 SPVIASVGDNFYKITAEALLVLQQFVKVIRPLTSPSSYDFAPFTSDIYQCTLVRLKAADI 1147
+ + + N + L L +K + + D + ++
Sbjct: 650 PILASFLRKNQRALKLGTLSALDILIKNYSDSLTAAMIDA--------VLDELPPLISES 701
Query: 1148 DQEVKERAISCMGQIICNLGDYLKSELPVCLPILLDRLRNEITRLTTVKALTKIAASPLR 1207
D V + AIS + + L L L+ +R+ + + + A+ + +
Sbjct: 702 DMHVSQMAISFLTTLAKVYPSSLSKISGSILNELIGLVRSPLLQGGALSAMLDFFQALVV 761
Query: 1208 IDLRPILTDGIPILGSFLRKNQRALKLSTLLLLDTLLVNYPSAISTEMLNKVTVELAPLV 1267
+ + +L + + + + +A L
Sbjct: 762 TGTNNLGYMDLL-----------------RMLTGPVYSQSTALTHKQSYYSIAKCVAALT 804
Query: 1268 SESDLHIAQLTLTLLTSIAKIQPNALVEPAAASILPQIGRHTDLTSVADLKQVILNAFTP 1327
+ + + + + A L ++G H DL+ +LK VIL AF+
Sbjct: 805 RACPKEGPAVVGQFIQDVKNSRSTDSIRLLALLSLGEVGHHIDLSGQLELKSVILEAFSS 864
Query: 1328 TSEEVKSAASYTLGSIAVGNLQQYVPFVLKEIENQPKRQYLLLHSLKEIISWQSTSTSGV 1387
SEEVKSAASY LGSI+VGNL +Y+PFVL+EI +QPKRQYLLLHSLKEII S++ V
Sbjct: 865 PSEEVKSAASYALGSISVGNLPEYLPFVLQEITSQPKRQYLLLHSLKEII-----SSASV 919
Query: 1388 AQLQQFVPAIWAQLFLHCECQEEGTRNVVAECLGKLTLIDPSNLLPRLQESLKSNSALMR 1447
L+ +V IWA L HCEC EEGTRNVVAECLGKLTLIDP LLPRL+ L S S+ R
Sbjct: 920 VGLKPYVENIWALLLKHCECAEEGTRNVVAECLGKLTLIDPETLLPRLKGYLISGSSYAR 979
Query: 1448 TTVLTAVKFTISDQMTSSDKDFRFMATNDLMSELQKDSIKLDDDSERKVVKMLLRLLEDK 1507
++V+TAVKFTISD D + + L+ LED
Sbjct: 980 SSVVTAVKFTISDHPQPI------------------------DPLLKNCIGDFLKTLEDP 1015
Query: 1508 NGEVQNLAVKCLGPLVNKVKEF---QVETIVDALCSNMVSDKEQLRDI 1552
+ V+ +A+ + ++T++ L + KE +R++
Sbjct: 1016 DLNVRRVALVTFNSAAHNKPSLIRDLLDTVLPHLYNETKVRKELIREV 1063
Score = 165 bits (417), Expect = 2e-41
Identities = 213/1044 (20%), Positives = 381/1044 (36%), Gaps = 138/1044 (13%)
Query: 62 LSDLLSRFGALLPSFHFV----ILTALLPQLSSPRQAVRKRTIVALSHLVMSCNLQLYTK 117
+DL++ ++ +L L V+ + L LV
Sbjct: 24 TNDLMTELQKDSIKLDDDSERKVVKMILKLLEDKNGEVQNLAVKCLGPLVSKVKEYQVET 83
Query: 118 LIDFLLEGLTTNKSTSTNRTYIQCFAAICRQAGHRFAEH------IERVMPLILKY-SRE 170
++D L + ++K + + + +++ + +++
Sbjct: 84 IVDTLCTNMLSDKE-QLRDISSIGLKTVIGELPPASSGSALAANVCKKITGRLTSAIAKQ 142
Query: 171 EDDELREFCLQACEAFVQRCPKEITPHIQSITELCLTYITYDPNYNYEDEEEGLGGEGGG 230
ED ++ L + R + SI L +
Sbjct: 143 EDVSVQLEALDIMADMLSRQGGLLVNFHPSILTCLLPQL--------------------- 181
Query: 231 EGMDTEEEDGEDEGEDDNEYSDDDDMSWKVRRAAAKCLEAIIATRRDLIGDMYRLVSPPL 290
VR+ L ++ + + ++ + L
Sbjct: 182 -----------------------TSPRLAVRKRTIIALGHLVMSCGN---IVFVDLIEHL 215
Query: 291 IARFKEREE-NVKSDIFHAYMALLKGTRTFSPLTPSDPNQMDQEDSPLCLLSTQVPSLVK 349
++ + + + A+ + + + ++
Sbjct: 216 LSELSKNDSMSTTRTYIQCIAAISRQAG--------------------HRIGEYLEKIIP 255
Query: 350 ALQCQLREKSIRTRQDCLALLRELVQTLPGCLAPSLPALIPDVTSVAEWDEEEGLGGEGG 409
+ R+ C+ V+ P + P + +I +D E
Sbjct: 256 LVVKFCNVDDDELREYCIQAFESFVRRCPKEVYPHVSTIINICLKYLTYDPNYNYDDEDE 315
Query: 410 GEGMDTEEEDGEDEGEDDNEYSDDDDMSWKVRRAAAKCLEAIIATRRDLIGDMYRLVSPP 469
E + +D+ D+EYSDDDDMSWKVRRAAAKCL+A+++TR +++ + Y+ VSP
Sbjct: 316 DENAMDADGGDDDDQGSDDEYSDDDDMSWKVRRAAAKCLDAVVSTRHEMLPEFYKTVSPA 375
Query: 470 LIARFKEREENVKSDIFHAYMALLKGTRTFSPLTPSDPNQMDQEDSPVCLLSTQVPSLVK 529
LI+RFKEREENVK+D+FHAY++LLK TR DP+ M+Q ++P+ +L +QVP++VK
Sbjct: 376 LISRFKEREENVKADVFHAYLSLLKQTRPVQSWL-CDPDAMEQGETPLTMLQSQVPNIVK 434
Query: 530 ALQCQLREKSIRTRQDCLALLRELMTSSDKDFRFMATNDLMSELQKDSIKLDDDSER-KV 588
AL Q++EKS++TRQ C +L EL+ + + + K + +
Sbjct: 435 ALHKQMKEKSVKTRQCCFNMLTELVNVLPGALTQHIPVLVPGIIFSLNDKSSSSNLKIDA 494
Query: 589 VKMLLRLLEDKNGEVQNLAVKCLGPLFKALTKIAASPLRIDLRPILTDGIPILGSFLRKN 648
+ L +L + + +V + V+ L P A + + + + ++ + +
Sbjct: 495 LSCLYVILCNHSPQVFHPHVQALVPPVVACVGDPFYKITSEALLVTQQLVKVIRPLDQPS 554
Query: 649 QRALKLSTLLLLDTLLVN-YPSAISTEMLNKVTVELAPLVSESDLHIAQLTLTLLTSIAK 707
L + + I E+ + + ++ ++ L +
Sbjct: 555 SFDATPYIKDLFTCTIKRLKAADIDQEVKERAISCMGQIICNLGDNLGSDLPNTLQIFLE 614
Query: 708 IQPNALVEPAAASILPQVLQIAKSPLLQG--AALTSMLEFFKSLVLAELPGLSFSELLNM 765
N + L + L+ +L F L + S L +
Sbjct: 615 RLKNEITRLTTVKALTLIAGSPLKIDLRPVLGEGVPILASFLRKNQRALKLGTLSALDIL 674
Query: 766 LIAPVMTGTALHKQAFHSLAKCVAALAITVQREALPVVEKFLKEL------KTNKDDAHQ 819
+ + TA A + + + + L ++ K + ++
Sbjct: 675 IKNYSDSLTAAMIDAVLDELPPLISESDMHVSQMAISFLTTLAKVYPSSLSKISGSILNE 734
Query: 820 VTIVALSHLVMSCNLQLTIVALSHLVMSCN-----LQLYTKLIDFLLEGLTTNKSTSTNR 874
+ + S L+ L + LV++ + L L + T +
Sbjct: 735 LIGLVRSPLLQGGALSAMLDFFQALVVTGTNNLGYMDLLRMLTGPVYSQSTALTHKQSYY 794
Query: 875 TYIQCFAAICRQAGHRFAEHIERVMPLILKYSREEDDELREFCLQACEAFVQRCPKEITP 934
+ +C AA+ R + + + + D +R L +
Sbjct: 795 SIAKCVAALTRACPKEGPAVVGQFIQDVKN--SRSTDSIRLLALLS-------------- 838
Query: 935 HIQSIGRHTDLTSVADLKQVILNAFTPTSEEVKSAASYTLGSIAEIIS------------ 982
+ +G H DL+ +LK VIL AF+ SEEVKSAASY LGSI+
Sbjct: 839 -LGEVGHHIDLSGQLELKSVILEAFSSPSEEVKSAASYALGSISVGNLPEYLPFVLQEIT 897
Query: 983 -------------WQSTSTSGVAQLQQFVPAIWAQLFLHCECQEEGTRNVVAECLGKLTL 1029
+ S++ V L+ +V IWA L HCEC EEGTRNVVAECLGKLTL
Sbjct: 898 SQPKRQYLLLHSLKEIISSASVVGLKPYVENIWALLLKHCECAEEGTRNVVAECLGKLTL 957
Query: 1030 IDPSNLLPRLQESLKSNSALMRTT 1053
IDP LLPRL+ L S S+ R++
Sbjct: 958 IDPETLLPRLKGYLISGSSYARSS 981
Score = 81.3 bits (199), Expect = 8e-16
Identities = 134/1209 (11%), Positives = 336/1209 (27%), Gaps = 94/1209 (7%)
Query: 254 DDMSWKVRRAAAKCLEAIIATRRDLIGDMYRLVSPPLIARFKEREENVKSDIFHAYMALL 313
+D + +V+ A KCL +++ ++ + L +E ++ L
Sbjct: 55 EDKNGEVQNLAVKCLGPLVSKVKE---YQVETIVDTLCTNMLSDKEQLRD----ISSIGL 107
Query: 314 KGTRTFSPLTPSDPNQMDQEDSPLCLLSTQVPSLVKALQCQLREKSIRTRQDCLALLREL 373
K P S + L A+ +++ + + + L ++ ++
Sbjct: 108 KTVIGELPPASSGSALAAN------VCKKITGRLTSAIA---KQEDVSVQLEALDIMADM 158
Query: 374 VQTLPGCLAPSLPALIPDVTSVAEWDEEE--GLGGEGGGEGMDTEEEDGEDEGEDDNEYS 431
+ G L P+++ + G + + + +
Sbjct: 159 LSRQGGLLVNFHPSILTCLLPQLTSPRLAVRKRTIIALGHLVMSCGNIVFVDLIEHLLSE 218
Query: 432 DDDDMSWKVRRAAAKCLEAIIATRRDLIGDMYRLVSPPLIARFKEREENVKSDIFHAYMA 491
+ S R +C+ AI IG+ + P ++ ++ ++ A+ +
Sbjct: 219 LSKNDSMSTTRTYIQCIAAISRQAGHRIGEYLEKIIPLVVKFCNVDDDELREYCIQAFES 278
Query: 492 LLKGTRTFSPLTPSDPNQMDQEDSPVCLLSTQVPSLVKALQCQLREKSIRTRQDCLALLR 551
++ R + P ++ + + +
Sbjct: 279 FVR--RCPKEVYPHVSTIINICLKYLTYDPNYNYDDEDEDENAMDADGGDDDDQGSDDEY 336
Query: 552 ELMTSSDKDFRFMATNDLMSELQKDSIKLDDDSERKVVKMLLRLLEDKNGEVQNLAVKCL 611
R A L + + L + + V L+ +++ V+
Sbjct: 337 SDDDDMSWKVRRAAAKCLDAVVSTRHEMLPEFYK-TVSPALISRFKEREENVKADVFHAY 395
Query: 612 GPLFKALTKIAASPLRIDLRPILTDGIPILGSFLRKNQRALKLSTLLLLDTLLVNYPSAI 671
L K + + D P +
Sbjct: 396 LSLLKQTRPVQSWLCDPDAMEQGET-------------------------------PLTM 424
Query: 672 STEMLNKVTVELAPLVSESDLHIAQLTLTLLTSIAKIQPNALVEPAAASILPQVLQIAKS 731
+ + L + E + Q +LT + + P AL ++P ++
Sbjct: 425 LQSQVPNIVKALHKQMKEKSVKTRQCCFNMLTELVNVLPGAL-TQHIPVLVPGIIFSLND 483
Query: 732 PLLQGAALTSMLEFFKSLVLAELPGLSFSELLNMLIAPVMTGTALHKQAFHSLAKCVAAL 791
L ++ P + + ++ V + L
Sbjct: 484 KSSSSNLKIDALSCLYVILCNHSPQVFHPHVQALVPPVVACVGDPFYKITSEALLVTQQL 543
Query: 792 AITVQREALPVVEKFLKELKTNKDDAHQVTIVALSHLVMSCNLQLTIVALSHLVMSCNLQ 851
++ P +K + A + + + +
Sbjct: 544 VKVIRPLDQPSSFDATPYIKDLFTCTIKRLKAADIDQEVKERAISCMGQIICNLGDNLGS 603
Query: 852 LYTKLIDFLLEGLTTNKSTSTNRTYIQCFAAICRQAGHRFAEHIERVMPLILKYSREEDD 911
+ LE L + T + A + + +P++ + R+
Sbjct: 604 DLPNTLQIFLERLKNEITRLTTVKALTLIAGSPLKI--DLRPVLGEGVPILASFLRKNQR 661
Query: 912 ELREFCLQACEAFVQRCPKEITPHIQSIGRHTDLTSVADLKQVILNAFTPTSEEVKSAAS 971
L+ L A + ++ +T + +++ + +
Sbjct: 662 ALKLGTLSALDILIKNYSDSLTAAMIDAVLDELPPLISESDMHVSQMAISFLTTLAKVYP 721
Query: 972 YTLGSIAEIISWQSTSTSGVAQLQQFVPAIWAQLFLHC--ECQEEGTRNVVAECLGKLTL 1029
+L I+ I + LQ + F + L
Sbjct: 722 SSLSKISGSILNELIGLVRSPLLQGGALSAMLDFFQALVVTGTNNLGYMDLLRMLTGPVY 781
Query: 1030 IDPSNLLPRLQESLKSNSALMRTTHQSNQTFNVIIQRNDIHNHNEETSFIYSFYYFLLSP 1089
+ L + + T + V+ Q ++ T I L
Sbjct: 782 SQSTALTHKQSYYSIAKCVAALTRACPKEGPAVVGQFIQDVKNSRSTDSIRLLALLSLGE 841
Query: 1090 VIASVGDNFYKITAEALL-VLQQFVKVIRPLTSPSSYDFAPFTSDIYQCTLVRLKAADID 1148
V + + +L + ++ S + + Y + L+
Sbjct: 842 VGHHIDLSGQLELKSVILEAFSSPSEEVKSAASYALGSISVGNLPEYLPFV--LQEITSQ 899
Query: 1149 QEVKERAISCMGQIICNLG-DYLKSELPVCLPILLDRLR--NEITRLTTVKALTKIAASP 1205
+ + + + +II + LK + +LL E TR + L K+
Sbjct: 900 PKRQYLLLHSLKEIISSASVVGLKPYVENIWALLLKHCECAEEGTRNVVAECLGKLTLI- 958
Query: 1206 LRIDLRPILTDGIPILGSFLRKNQRALKLSTLLLLDTLLVNYPSAISTEMLNKVTVELAP 1265
+P L +L + S + + + ++P I +L +
Sbjct: 959 -------DPETLLPRLKGYLISGSSYARSSVVTAVKFTISDHPQPID-PLLKNCIGDFLK 1010
Query: 1266 LVSESDLHIAQLTLTLLTSIAKIQPNALVEPAAASILPQIGRHTDLTSVADLKQVILNAF 1325
+ + DL++ ++ L S A +P +L+ ++LP + T + +++V + F
Sbjct: 1011 TLEDPDLNVRRVALVTFNSAAHNKP-SLIRDLLDTVLPHLYNETKVRK-ELIREVEMGPF 1068
Query: 1326 TPT---SEEVKSAASYTLGSI-----AVGNLQQYVPFVLKEIENQPKRQYLLLHSLKEII 1377
T +++ AA + ++ ++ +++ V +++ + L L +
Sbjct: 1069 KHTVDDGLDIRKAAFECMYTLLDSCLDRLDIFEFLNHVEDGLKDHYDIKMLTFLMLVRLS 1128
Query: 1378 SWQSTSTSGVAQLQQFVPAIWAQLFLHC---------ECQEEGTRNVVAECLGKLTLIDP 1428
+ ++ + +L + V + A E Q+E R+ + + L I
Sbjct: 1129 TLCPSAV--LQRLDRLVEPLRATCTTKVKANSVKQEFEKQDELKRSAM-RAVAALLTIPE 1185
Query: 1429 SNLLPRLQE 1437
+ P + E
Sbjct: 1186 AEKSPLMSE 1194
Score = 43.2 bits (100), Expect = 3e-04
Identities = 39/270 (14%), Positives = 84/270 (31%), Gaps = 36/270 (13%)
Query: 42 LSTAIEKQEDVSVQLEALDILSDLLSRFGALLPSFHFVILTALLPQLSSPRQAVRKRTIV 101
+ + S++L AL L ++ S + + +L SSP + V+
Sbjct: 819 IQDVKNSRSTDSIRLLALLSLGEVGHHID---LSGQLELKSVILEAFSSPSEEVKSAASY 875
Query: 102 ALSHLVMSCNLQLYTKLIDFLLEGLTTNKSTSTNRTYIQCFAAICRQAGHRFAEHIERVM 161
AL + + + + F+L+ +T+ I + ++E +
Sbjct: 876 ALGSISVGN----LPEYLPFVLQEITSQPKRQYLL-LHSLKEIISSASVVGLKPYVENIW 930
Query: 162 PLILKYSREEDDELREFCLQACEAFVQRCPKEITPHIQSITELCLTYITYDPNYNYEDEE 221
L+LK+ ++ R + P+ + P ++ +
Sbjct: 931 ALLLKHCECAEEGTRNVVAECLGKLTLIDPETLLPRLKGYLI--------SGSSYARSS- 981
Query: 222 EGLGGEGGGEGMDTEEEDGEDEGEDDNEYSDD---------DDMSWKVRRAAAKCLEAII 272
+ + D + + + +D VRR A +
Sbjct: 982 ----------VVTAVKFTISDHPQPIDPLLKNCIGDFLKTLEDPDLNVRRVALVTFNSAA 1031
Query: 273 ATRRDLIGDMYRLVSPPLIARFKEREENVK 302
+ LI D+ V P L K R+E ++
Sbjct: 1032 HNKPSLIRDLLDTVLPHLYNETKVRKELIR 1061
Score = 40.9 bits (94), Expect = 0.002
Identities = 60/458 (13%), Positives = 117/458 (25%), Gaps = 76/458 (16%)
Query: 48 KQEDVSVQLEALDILSDLLSRFGALLPSFHFVILTALLPQLSSPRQAVRKRTIV------ 101
++ +++L L L L+ + L + + LP L S + +
Sbjct: 657 RKNQRALKLGTLSALDILIKNYSDSLTAAMIDAVLDELPPLISESDMHVSQMAISFLTTL 716
Query: 102 --ALSHLVMSCNLQLYTKLIDFLLEGLTTNKSTSTNRTYIQCFAAICRQAGHRFAEHIER 159
+ + + +LI + L + S + Q
Sbjct: 717 AKVYPSSLSKISGSILNELIGLVRSPLLQGGALSAMLDFFQALVVTGTNNLGYMDLLRML 776
Query: 160 VMPLILKYSREEDDELREFCLQACEAFVQRCPKEITPHIQSITELCLTYITYDPNYNYED 219
P+ + + + + A + CPKE + + + D
Sbjct: 777 TGPVYSQSTALTHKQSYYSIAKCVAALTRACPKEGPAVVGQFIQDVKNSRSTDSIRLLAL 836
Query: 220 EEEGLGGEGGGEGMDTEEEDGEDEGEDDNEYSDDDDMSWKVRRAAAKCLEAIIATRRDLI 279
G G E + E S +V+ AA+ L +I
Sbjct: 837 LSLGEVGHHIDLSGQLELKSVILEAFSSP--------SEEVKSAASYALGSISVGNLPEY 888
Query: 280 GDMYRLVSPPLIARFKEREENVKSDIFHAYMALLK--GTRTFSPLTP----------SDP 327
P + + + + + H+ ++ P
Sbjct: 889 --------LPFVLQEITSQPKRQYLLLHSLKEIISSASVVGLKPYVENIWALLLKHCECA 940
Query: 328 NQMDQEDSPLC---LLSTQVPSLVKALQCQLREKSIRTRQDCLALLRELVQTLPGCLAPS 384
+ + C L +L+ L+ L S R + ++ + P + P
Sbjct: 941 EEGTRNVVAECLGKLTLIDPETLLPRLKGYLISGSSYARSSVVTAVKFTISDHPQPIDPL 1000
Query: 385 LPALIPDVTSVAEWDEEEGLGGEGGGEGMDTEEEDGEDEGEDDNEYSDDDDMSWKVRRAA 444
L I D +D VRR A
Sbjct: 1001 LKNCIGDFLKTL-------------------------------------EDPDLNVRRVA 1023
Query: 445 AKCLEAIIATRRDLIGDMYRLVSPPLIARFKEREENVK 482
+ + LI D+ V P L K R+E ++
Sbjct: 1024 LVTFNSAAHNKPSLIRDLLDTVLPHLYNETKVRKELIR 1061
Score = 39.3 bits (90), Expect = 0.005
Identities = 28/181 (15%), Positives = 56/181 (30%), Gaps = 15/181 (8%)
Query: 1 MVSDKEQLRDISSIGLKTVISELPLGSNALAANVCRRITGKLSTAIEKQEDVSVQLEALD 60
++ + + + + LK +IS S I L E E+ + +
Sbjct: 895 EITSQPKRQYLLLHSLKEIISSA---SVVGLKPYVENIWALLLKHCECAEE-GTRNVVAE 950
Query: 61 ILSDLLSRFGALLPSFHFVILTALLPQLSSPRQAVRKRTIVALSHLVM---SCNLQLYTK 117
L G L +L L L S R + A+ + L
Sbjct: 951 CL-------GKLTLIDPETLLPRLKGYLISGSSYARSSVVTAVKFTISDHPQPIDPLLKN 1003
Query: 118 LIDFLLEGLTTNKSTSTNRTYIQCFAAICRQAGHRFAEHIERVMPLILKYSREEDDELRE 177
I L+ L + + R + F + + ++ V+P + ++ + +RE
Sbjct: 1004 CIGDFLKTLE-DPDLNVRRVALVTFNSAAHNKPSLIRDLLDTVLPHLYNETKVRKELIRE 1062
Query: 178 F 178
Sbjct: 1063 V 1063
>d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 888
Score = 67.8 bits (164), Expect = 9e-12
Identities = 114/917 (12%), Positives = 266/917 (29%), Gaps = 129/917 (14%)
Query: 42 LSTAIEKQEDVSVQLEALDILSDLLSRFGALLPSFHFVILTALLPQLSSPRQAVRKRTIV 101
+ T ++ +++ + L L + +++ + F I + L + +R +
Sbjct: 51 VLTKLKSEDEPTRSLSGLILKNNVKAHFQNFPNGVTDFIKSECLNNIGDSSPLIRATVGI 110
Query: 102 ALSHLVMSCNLQLYTKLIDFLLEGLTTNKSTSTNRTYIQCFAAICRQAG-----HRFAEH 156
++ + LQ + L+ L L + +T IC +
Sbjct: 111 LITTIASKGELQNWPDLLPKLCSLLDSE-DYNTCEGAFGALQKICEDSAEILDSDVLDRP 169
Query: 157 IERVMPLILKYSREEDDELREFCLQACEAFVQRCPKEITPHIQSITELCLTYITYDPNYN 216
+ ++P L++ + ++R + F+ + + HI S TE
Sbjct: 170 LNIMIPKFLQFFKHSSPKIRSHAVACVNQFIISRTQALMLHIDSFTENLFALAG------ 223
Query: 217 YEDEEEGLGGEGGGEGMDTEEEDGEDEGEDDNEYSDDDDMSWKVRRAAAKCLEAIIATRR 276
D +VR+ + L ++ R
Sbjct: 224 --------------------------------------DEEPEVRKNVCRALVMLLEVRM 245
Query: 277 DLIGDMYRLVSPPLIARFKEREENVKSDIFHAYMALLKGTRTFSPLTPSDPNQMDQEDSP 336
D + + ++ R ++++ENV + ++ L + L
Sbjct: 246 DRLLPHMHNIVEYMLQRTQDQDENVALEACEFWLTLAEQPICKDVLVRH----------- 294
Query: 337 LCLLSTQVPSLVKALQCQLREKSIRTRQDCLALLRELVQTLPGCLAPSLPALIPDVTSVA 396
L +P LV ++ L E +T+P P T
Sbjct: 295 ---LPKLIPVLVNGMKYS------DIDIILLKGDVEEDETIPDSEQDIRPRFHRSRTVAQ 345
Query: 397 EWDEEEGLGGEGGGEGMDTEEEDGEDEGEDDNEYSDDDDMSWKVRRAAAKCLEAIIATRR 456
+ DE+ EEED +D+ DD DD W +R+ +A L+ + R
Sbjct: 346 QHDED------------GIEEEDDDDDEIDD----DDTISDWNLRKCSAAALDVLANVYR 389
Query: 457 DLIGDMYRLVSPPLIARFKEREENVKSDIFHAYMALLKGTRTFSPLTPSDPNQMDQEDSP 516
D + + L+ + + + A D
Sbjct: 390 DELLPHILPLLKELLFHHEWVVKESGILVLGAIAEGCMQGMIPYLPELIPHLIQCLSDKK 449
Query: 517 VCLLSTQVPSLVKALQCQLREKSIRTRQDCLALLRELMTSSDKDFRFMATNDLMSELQKD 576
+ S +L + + + + + L + + S+K + A + L+++
Sbjct: 450 ALVRSITCWTLSRYAHWVVSQPPDTYLKPLMTELLKRILDSNKRVQ-EAACSAFATLEEE 508
Query: 577 SIKLDDDSERKVVKMLLRLLEDKNGEVQNLAVKCLGPLFKALTKIAASP----------- 625
+ ++ L+ + + +G L ++ P
Sbjct: 509 ACTELVPYLAYILDTLVFAFSKYQHKNLLILYDAIGTLADSVGHHLNKPEYIQMLMPPLI 568
Query: 626 ----LRIDLRPILTDGIPILGSFLRKNQRALKLSTLLLLDTLLVNYPSAISTEMLNKVTV 681
+ D L + L S Q + + ++ MLN
Sbjct: 569 QKWNMLKDEDKDLFPLLECLSSVATALQSGFLPYCEPVYQRCVNLVQKTLAQAMLNNAQP 628
Query: 682 ELAPLVSESDLHIAQLTLTLLTSIAKIQPNALVEPAAASILPQVLQIA---KSPLLQGAA 738
+ D + L LL+ +A+ + + A S + ++ K P ++ ++
Sbjct: 629 DQY---EAPDKDFMIVALDLLSGLAEGLGGNIEQLVARSNILTLMYQCMQDKMPEVRQSS 685
Query: 739 LTSMLEFFKSLVLAELPGLSFSELLNMLIAPVMTGTALHKQAFHSLAKCVAALAITVQRE 798
+ + K+ P + ++ + +L + + ++I + E
Sbjct: 686 FALLGDLTKACFQHVKPCI--ADFMPILGTNLNPEFISVCNNA---TWAIGEISIQMGIE 740
Query: 799 ALPVVEKFLKELKTNKDDAHQVTIVALSH-LVMSCNLQLTIVALSHLVMSCNLQLYTKLI 857
P + L +L + ++ L+ T + + L C ++ L
Sbjct: 741 MQPYIPMVLHQL-----------VEIINRPNTPKTLLENTAITIGRLGYVCPQEVAPMLQ 789
Query: 858 DFL---LEGLTTNKSTSTNRTYIQCFAAICRQAGHRFAEHIERVMPLILKYSREEDDELR 914
F+ L + + + + + + + D+LR
Sbjct: 790 QFIRPWCTSLRNIRDNEEKDSAFRGICTMISVNPSGVIQDFIFFCDAVASW-INPKDDLR 848
Query: 915 EFCLQACEAFVQRCPKE 931
+ + F + E
Sbjct: 849 DMFCKILHGFKNQVGDE 865
Score = 64.7 bits (156), Expect = 8e-11
Identities = 85/667 (12%), Positives = 203/667 (30%), Gaps = 54/667 (8%)
Query: 544 QDCLALLRELMTSSDKDFRFMATNDLMSELQKDSIKLDDDSERK----VVKMLLRLLEDK 599
D L L L+ S D + A L + + LD D + ++ L+ +
Sbjct: 125 PDLLPKLCSLLDSEDYNTCEGAFGALQKICEDSAEILDSDVLDRPLNIMIPKFLQFFKHS 184
Query: 600 NGEVQNLAVKCLGPLFKALTKIAASPLRIDLRPILTDGIPILGSFLRKNQRALKLSTLLL 659
+ ++++ AV C+ + T+ L + L + + ++ +
Sbjct: 185 SPKIRSHAVACVNQFIISRTQ--------ALMLHIDSFTENLFALAGDEEPEVRKNVCRA 236
Query: 660 LDTLLVNYPSAISTEMLNKVTVELAPLVSESDLHIAQLTLTLLTSIAKIQPNALVEPAAA 719
L LL + M N V L + + + LT + ++
Sbjct: 237 LVMLLEVRMDRLLPHMHNIVEYMLQRTQDQDENVALEACEFWLTLAEQPICKDVLVRHLP 296
Query: 720 SILPQVLQIAKSPLLQGAALTSMLEFFKSLVLAELPGL-SFSELLNMLIAPVMTGTALHK 778
++P ++ K + L +E +++ +E F + G
Sbjct: 297 KLIPVLVNGMKYSDIDIILLKGDVEEDETIPDSEQDIRPRFHRSRTVAQQHDEDGIEEED 356
Query: 779 QAFHSLAKCVAALAITVQREALPVVEKFLKELKTNKDDAHQVTIVALSHLVMSCNLQLTI 838
+ +++ + ++ + + L + I
Sbjct: 357 DDDDEIDDDDTISDWNLRKCSAAALDVLANVYRDELLPHILPLLKELLFHHEWVVKESGI 416
Query: 839 VALSHLVMSCNLQLYTKLIDFL--LEGLTTNKSTSTNRTYIQCFAAICRQAGHRFAE-HI 895
+ L + C + L + + L ++K + + + ++
Sbjct: 417 LVLGAIAEGCMQGMIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVVSQPPDTYL 476
Query: 896 ERVMPLILKYSREEDDELREFCLQACEAFVQRCPKEITPHIQSIGRHTDLTSVADLKQVI 955
+ +M +LK + + ++E A + E+ P++ + +
Sbjct: 477 KPLMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLA------------YILDTL 524
Query: 956 LNAFTPTSEEVKSAASYTLGSIAEIISWQSTSTSGVAQLQQFVPAIWAQLFLHCECQEEG 1015
+ AF+ + +G++A+ + + L + W L +
Sbjct: 525 VFAFSKYQHKNLLILYDAIGTLADSVGHHLNKPEYIQMLMPPLIQKWNMLKDEDKDLFP- 583
Query: 1016 TRNVVAECLGKLTLIDPSNLLPRLQESLKSNSALMRTTHQSNQTFNVIIQRNDIHNHNEE 1075
+ ECL + S LP + + ++ + + D + ++
Sbjct: 584 ----LLECLSSVATALQSGFLPYCEPVY---QRCVNLVQKTLAQAMLNNAQPDQYEAPDK 636
Query: 1076 TSFIYSFYYFLLSPVIASVGDNFYKITAEALL--------------VLQQFVKVIRPLTS 1121
I + LLS + +G N ++ A + + V Q ++ LT
Sbjct: 637 DFMIVALD--LLSGLAEGLGGNIEQLVARSNILTLMYQCMQDKMPEVRQSSFALLGDLTK 694
Query: 1122 PSSYDFAPFTSDIYQCTLVRLKAADIDQEVKERAISCMGQIICNLGDYLKSELPVCLPIL 1181
P +D L I V A +G+I +G ++ +P+ L L
Sbjct: 695 ACFQHVKPCIADFMPILGTNLNPEFI--SVCNNATWAIGEISIQMGIEMQPYIPMVLHQL 752
Query: 1182 LDRLRNE 1188
++ +
Sbjct: 753 VEIINRP 759
Score = 57.4 bits (137), Expect = 2e-08
Identities = 93/769 (12%), Positives = 224/769 (29%), Gaps = 53/769 (6%)
Query: 688 SESDLHIAQLTLTLLTSIAKIQPNALVEPAAASILPQVLQ--IAKSPLLQGAALTSMLEF 745
D L+ +L + K I + L SPL++ +
Sbjct: 56 KSEDEPTRSLSGLILKNNVKAHFQNFPNGVTDFIKSECLNNIGDSSPLIRATVGILITTI 115
Query: 746 FKSLVLAELPGLSFSELLNMLIAPVMTGTALHKQ-AFHSLAKCVAALAITVQREALPVVE 804
L P +LL L + + + + AF +L K A + + V++
Sbjct: 116 ASKGELQNWP-----DLLPKLCSLLDSEDYNTCEGAFGALQKICEDSAEILDSD---VLD 167
Query: 805 KFLKELKTNKDDAHQVTIVALSHLVMSCNLQLTIVALSHLVMSCNLQLYTKLIDFLLEG- 863
+ L + + H S ++ VA + + Q ID E
Sbjct: 168 RPLNIMIPK-------FLQFFKH--SSPKIRSHAVACVNQFIISRTQALMLHIDSFTENL 218
Query: 864 --LTTNKSTSTNRTYIQCFAAICRQAGHRFAEHIERVMPLILKYSREEDDELREFCLQAC 921
L ++ + + + R H+ ++ +L+ ++++D+ + L+AC
Sbjct: 219 FALAGDEEPEVRKNVCRALVMLLEVRMDRLLPHMHNIVEYMLQRTQDQDENVA---LEAC 275
Query: 922 EAFVQRCPKEITPHIQSIGRHTDLTSVADLKQVILNAFTPTSEEVKSAASYTLGSIAEII 981
E ++ + I + + L V + + S +I
Sbjct: 276 EFWLTLAEQPICKDVL-VRHLPKLIPVLVNGMKYSDIDIILLKGDVEEDETIPDSEQDIR 334
Query: 982 SWQSTSTSGVAQLQQFVPAIWAQLFLHCECQEEGTRNVVAECLGKLTLIDPSNLLPRLQE 1041
S + Q + + + + + +C + + L
Sbjct: 335 PRFHRSRTVAQQHDEDGIEEEDDDDDEIDDDDTISDWNLRKCSAAALDVLANVYRDELLP 394
Query: 1042 SLKSNSALMRTTHQSNQTFNVIIQRNDIHNHNEETSFIYSFYYFLLSPVIASVGDNFYKI 1101
+ + H+ + I+ I + + + L+ +I + D +
Sbjct: 395 HILPLLKELLFHHEWVVKESGILVLGAIAEGCMQ--GMIPYLPELIPHLIQCLSDKKALV 452
Query: 1102 TAEALLVLQQFVKVIRPLTSPSSYDFAPFTSDIYQCTLVRLKAADIDQEVKERAISCMGQ 1161
+ L ++ + + + L R+ D ++ V+E A S
Sbjct: 453 RSITCWTLSRYAHWVVS------QPPDTYLKPLMTELLKRIL--DSNKRVQEAACSAFAT 504
Query: 1162 IICNLGDYLKSELPVCLPILLDRL-----RNEITRLTTVKALTKIAASPLRIDLRPILTD 1216
+ L L L L+ +N + + L L +
Sbjct: 505 LEEEACTELVPYLAYILDTLVFAFSKYQHKNLLILYDAIGTLADSVGHHLNKPEYIQMLM 564
Query: 1217 GIPILGSFLRKNQRALKLSTLLLLDTLLVNYPSAISTEMLNKVTVELAPLVSESDLHIAQ 1276
I + K++ L L ++ S + + +
Sbjct: 565 PPLIQKWNMLKDEDKDLFPLLECLSSVATALQSGFLPYCEPVYQRCVNLVQKTLAQAMLN 624
Query: 1277 LTLTLLTSIAKIQPNALVEPAAASILPQIGRHT-DLTSVADLKQVILNAFTPTSEEVKSA 1335
+ + + +G + L + +++ ++ EV+ +
Sbjct: 625 NAQPDQYEAPDKDFMIVALDLLSGLAEGLGGNIEQLVARSNILTLMYQCMQDKMPEVRQS 684
Query: 1336 ASYTLGSIAVG---NLQQYVPFVLKEIENQPKRQYLLLHSLKEIISWQ--STSTSGVAQL 1390
+ LG + +++ + + + +++ S+ +W S ++
Sbjct: 685 SFALLGDLTKACFQHVKPCIADFMPILGTNLNPEFI---SVCNNATWAIGEISIQMGIEM 741
Query: 1391 QQFVPAIWAQLFLHCECQE--EGTRNVVAECLGKLTLIDPSNLLPRLQE 1437
Q ++P + QL + A +G+L + P + P LQ+
Sbjct: 742 QPYIPMVLHQLVEIINRPNTPKTLLENTAITIGRLGYVCPQEVAPMLQQ 790
>d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId:
9606]}
Length = 876
Score = 64.0 bits (154), Expect = 2e-10
Identities = 84/727 (11%), Positives = 206/727 (28%), Gaps = 101/727 (13%)
Query: 537 EKSIRTRQDCLALLRELMTSSDKDFRFMATNDLMSELQKDSIKLDDDSERKVVKMLLRLL 596
S R ++ +TS D D + ++ Q+ + +D ++ R+V +L L
Sbjct: 48 GNSQVARVAAGLQIKNSLTSKDPDIK--------AQYQQRWLAIDANARREVKNYVLHTL 99
Query: 597 EDKNGEVQNLAVKCLGPLFKALTKIAASPLRIDLRPILTDGIPILGSFLRKNQ--RALKL 654
+ + + + IA + + ++ P + IP L + + +K
Sbjct: 100 GTETYRPSSASQ--------CVAGIACAEIPVNQWP---ELIPQLVANVTNPNSTEHMKE 148
Query: 655 STLLLLDTLLVNYPSAISTEMLNKVTVELAPLV---SESDLHIAQLTLTLLTSIAKIQPN 711
STL + + + + N++ + + S+ T LL S+ + N
Sbjct: 149 STLEAIGYICQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKAN 208
Query: 712 ALVEPAAASILPQVLQIAKSP-----LLQGAALTSMLEFFKSLVLAELPGLSFSELLNML 766
E I+ V + + P + L ++ + + + F+ + +
Sbjct: 209 FDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAM 268
Query: 767 -----------------IAPVMTGTALHKQAFHSLAKCVAALAITVQREALPVVEKFLKE 809
+ A+ + + + AL + L +
Sbjct: 269 KSDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEHTSKFYAKGALQYLVPILTQ 328
Query: 810 LKTNKDDAHQVTIVALSHLVMSCNLQLTIVALSHLVMSCNLQLYTKLIDFLLEGLTTNKS 869
T +D+ C + L +V + F+ E +
Sbjct: 329 TLTKQDENDDDDDWNPCKAAGVCLMLLATCCEDDIVPHV--------LPFIKEHIKNPDW 380
Query: 870 TSTNRTYIQCFAAICRQAGHRFAEHIERVMPLILKYSREEDDELREFCLQACEAFVQRCP 929
+ + + + + + MP +++ ++ +R+ + P
Sbjct: 381 RYRDAAVMAFGCILEGPEPSQLKPLVIQAMPTLIELMKDPSVVVRDTAAWTVGRICELLP 440
Query: 930 KEITPHIQ-----------------------------SIGRHTDLTSVADLKQVILNAFT 960
+ + + + D ++ +
Sbjct: 441 EAAINDVYLAPLLQCLIEGLSAEPRVASNVCWAFSSLAEAAYEAADVADDQEEPATYCLS 500
Query: 961 PTSEEVKSAASYTLGSIAE-----IISWQSTSTSGVAQLQQFVPAIWAQLFLHCECQEEG 1015
+ E + T S + V + + L + +
Sbjct: 501 SSFELIVQKLLETTDRPDGHQNNLRSSAYESLMEIVKNSAKDCYPAVQKTTLVIMERLQQ 560
Query: 1016 TRNVVAECLGKLTLIDPSNLLPRLQESLKSNSALMRTTHQSNQTFNVIIQRNDIHNHNEE 1075
+ + I ++L L +L++ ++ + V+ +
Sbjct: 561 VLQMESHIQSTSDRIQFNDLQSLLCATLQNVLRKVQHQDALQISDVVMASLLRMFQSTAG 620
Query: 1076 TSFIYSFYYFLLSPVIASVGDNFYKI-------------TAEALLVLQQFVKVIRPLTSP 1122
+ + +S ++ +G F K V V ++ L
Sbjct: 621 SGGVQEDALMAVSTLVEVLGGEFLKYMEAFKPFLGIGLKNYAEYQVCLAAVGLVGDLCRA 680
Query: 1123 SSYDFAPFTSDIYQCTLVRLKAADIDQEVKERAISCMGQIICNLGDYLKSELPVCLPILL 1182
+ PF ++ Q L L ++ + VK + +S G I +G K L V L L
Sbjct: 681 LQSNIIPFCDEVMQLLLENLGNENVHRSVKPQILSVFGDIALAIGGEFKKYLEVVLNTLQ 740
Query: 1183 DRLRNEI 1189
+ ++
Sbjct: 741 QASQAQV 747
Score = 56.3 bits (134), Expect = 3e-08
Identities = 84/775 (10%), Positives = 216/775 (27%), Gaps = 78/775 (10%)
Query: 249 EYSDDDDMSWKVRRAAAKCLEAIIATRRDLIGDMYRLVSPPLIARFKEREENVKSDIFHA 308
+ + + ++ + + + I +D+ + + S ++ + +
Sbjct: 135 ANVTNPNSTEHMKESTLEAIGYIC---QDIDPEQLQDKSNEILTAIIQGMRKEEPSNNVK 191
Query: 309 YMALLKGTRTFSPLTPSDPNQMDQEDSPLCLLSTQVPSLVKALQCQLREKSIRTRQDCLA 368
A + + + ++ +++ + + R R L
Sbjct: 192 LAATNALLNSLEFTKANFDKESER------------HFIMQVVCEATQCPDTRVRVAALQ 239
Query: 369 LLRELVQTLPGCLAPSLPALIPDVTSVAEWDEEEGLGGEGGGEGMDTEEEDGEDEGEDDN 428
L +++ + + + +T A + + + +G + +E+ + E
Sbjct: 240 NLVKIMSLYYQYMETYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASE 299
Query: 429 EYSDDDDMSWKVRRAAAKCLEAIIATRRDLIGDMYRLVSPPLIARFKEREENVKSDIFHA 488
+ A L+ ++ + K +
Sbjct: 300 AAEQGRPPEHTSKFYAKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCC 359
Query: 489 YMALLKGTRTFSPLTPSDPNQMDQEDSPVCLLSTQVPSLVKALQCQLREKSIRTRQDCLA 548
++ F +P+ ++ + + L+ + + +
Sbjct: 360 EDDIVPHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLVIQ--------AMP 411
Query: 549 LLRELMTSSDKDFRFMATNDLMSELQKDSIKLDDDSERKVVKMLLRLLEDKNGEVQNLAV 608
L ELM R A + + +D + L V +
Sbjct: 412 TLIELMKDPSVVVRDTAAWTVGRICELLPEAAINDVYLAPLLQCLIEGLSAEPRVASNVC 471
Query: 609 KCLGPLFKALTKIAASPLRIDLRPILTDGIPILGSFLRKNQRALKLSTLLLLDTLLVNYP 668
L +A + A + D L + + + LL +
Sbjct: 472 WAFSSLAEAAYEAA---------DVADDQEEPATYCLSSSFELI-VQKLLETTDRPDGHQ 521
Query: 669 SAISTEMLNKVTVELAPLVSESDLHIAQLTLTLLTSIAKIQPNALVEPAAASILPQVLQI 728
+ + + + + + + + TL ++ + ++ S +
Sbjct: 522 NNLRSSAYESLMEIVKNSAKDCYPAVQKTTLVIMERLQQVLQME-------SHIQSTSDR 574
Query: 729 AKSPLLQGAALTSMLEFFKSLVLAELPGLSFSELLNMLIAPVMTGTALHKQAFHSLAKCV 788
+ LQ ++ + + + S+++ + + TA V
Sbjct: 575 IQFNDLQSLLCATLQNVLRKVQHQDAL--QISDVVMASLLRMFQSTAGSGGVQEDALMAV 632
Query: 789 AALAITVQREALPVVEKFLKELKT--NKDDAHQVTIVALSHLVMSCNLQLTIVALSHLVM 846
+ L + E L +E F L +QV + A+ + L +
Sbjct: 633 STLVEVLGGEFLKYMEAFKPFLGIGLKNYAEYQVCLAAVG----------LVGDLCRALQ 682
Query: 847 SCNLQLYTKLIDFLLEGLTTNKSTSTNRTY-IQCFAAICRQAGHRFAEHIERVMPLILKY 905
S + +++ LLE L + + + F I G F +++E V+ + +
Sbjct: 683 SNIIPFCDEVMQLLLENLGNENVHRSVKPQILSVFGDIALAIGGEFKKYLEVVLNTLQQA 742
Query: 906 SREEDD-----------ELREFCLQACEAFVQRCPKEITPHIQSIGRHTDLTSVADLKQV 954
S+ + D ELRE CL+A VQ + + V +
Sbjct: 743 SQAQVDKSDYDMVDYLNELRESCLEAYTGIVQGLKGDQENVHPDV--MLVQPRVEFILSF 800
Query: 955 ILNAF--TPTSEEVKSAASYTLGSIAEIISWQSTSTSGVAQLQQFVPAIWAQLFL 1007
I + ++ V + A+ +G + + G L+ L
Sbjct: 801 IDHIAGDEDHTDGVVACAAGLIGDLC--------TAFGKDVLKLVEARPMIHELL 847
Score = 49.3 bits (116), Expect = 4e-06
Identities = 87/646 (13%), Positives = 187/646 (28%), Gaps = 51/646 (7%)
Query: 748 SLVLAELPGLSFSELLNMLIAPVMTGTA---LHKQAFHSLAKCVAALAITVQREALPVVE 804
+ AE+P + EL+ L+A V + + + ++ + ++ +
Sbjct: 115 GIACAEIPVNQWPELIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKSNEIL 174
Query: 805 KFLKELKTNKDDAHQVTIVALSHLVMSCNLQLTIVALSHLVMSCNLQLYTKLIDFLLEGL 864
+ + ++ ++ V + A + L+ S L + + + I ++
Sbjct: 175 TAIIQGMRKEEPSNNVKLAATNALLNS---------LEFTKANFDKESERHFIMQVVCEA 225
Query: 865 TTNKSTSTNRTYIQCFAAICRQAGHRFAEHIERVMPLILKYSREEDDELREFCLQACEAF 924
T T +Q I ++ + I + + D + E LQ E +
Sbjct: 226 TQCPDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSDID--EVALQGIEFW 283
Query: 925 VQRCPKEITPHIQSIGRHTDLTSVADLKQVI---------------LNAFTPTSEEVKSA 969
C +E+ I++ + L ++
Sbjct: 284 SNVCDEEMDLAIEASEAAEQGRPPEHTSKFYAKGALQYLVPILTQTLTKQDENDDDDDWN 343
Query: 970 ASYTLGSIAEIISWQSTSTSGVAQLQQFVPAIWAQLFLHCECQEEGTRNVVAECLGKLTL 1029
G +++ L I + + + ++
Sbjct: 344 PCKAAGVCLMLLATCCEDDIVPHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLK 403
Query: 1030 IDPSNLLPRLQESLKSNSALMRTTHQSNQTFNVIIQRNDIHNHNEETSFIYSFYYFLLSP 1089
+P L E +K S ++R T + N + L +
Sbjct: 404 PLVIQAMPTLIELMKDPSVVVRDTAAWTVGRICELLPEAAINDVYLAPLLQCLIEGLSAE 463
Query: 1090 VIASVGDNFYKITAEALLVLQQFVKVIRPLTSPSSYDFAPFTSDIYQCTLVRLKAADIDQ 1149
V N + + V P++Y + I Q L D Q
Sbjct: 464 --PRVASNVCWAFSSLAEAAYEAADVADDQEEPATYCLSSSFELIVQKLLETTDRPDGHQ 521
Query: 1150 -EVKERAISCMGQIICNLGDYLKSELPVCLPILLDRLRNEITRLTTVKALTKIAASPLRI 1208
++ A + +I+ N + ++++RL+ ++ + I ++ RI
Sbjct: 522 NNLRSSAYESLMEIVKNSAKDCYPAVQKTTLVIMERLQQ------VLQMESHIQSTSDRI 575
Query: 1209 DLRPILTDGIPILGSFLRKNQRALKLSTL-----LLLDTLLVNYPSAISTEMLNKVTVEL 1263
+ + L + LRK Q L LL S E L
Sbjct: 576 QFNDLQSLLCATLQNVLRKVQHQDALQISDVVMASLLRMFQSTAGSGGVQEDALMAVSTL 635
Query: 1264 APLVSESDLHIAQLTLTLLTSIAKIQPNALVEPAAASILPQIGRHTD---LTSVADLKQV 1320
++ L + L K V AA ++ + R + ++ Q+
Sbjct: 636 VEVLGGEFLKYMEAFKPFLGIGLKNYAEYQVCLAAVGLVGDLCRALQSNIIPFCDEVMQL 695
Query: 1321 ILNAFTPTS--EEVKSAASYTLGSIAV---GNLQQYVPFVLKEIEN 1361
+L + VK G IA+ G ++Y+ VL ++
Sbjct: 696 LLENLGNENVHRSVKPQILSVFGDIALAIGGEFKKYLEVVLNTLQQ 741
Score = 37.8 bits (86), Expect = 0.015
Identities = 42/230 (18%), Positives = 77/230 (33%), Gaps = 27/230 (11%)
Query: 2 VSDKEQLRDISSIGLKTVISEL-PLGSNALAANVCRRITGKLSTAIEKQEDVSVQLEALD 60
SD+ Q D+ S+ T+ + L + + L VQ +AL
Sbjct: 571 TSDRIQFNDLQSLLCATLQNVLRKVQHQDALQISDVVMASLLRMFQSTAGSGGVQEDALM 630
Query: 61 ILSDLLSRFGALLPSFHFVILTALLPQLSSPRQA-VRKRTIVALSHLVMSCNLQL---YT 116
+S L+ G + L L + + V + + L + +
Sbjct: 631 AVSTLVEVLGGEFLKYMEAFKPFLGIGLKNYAEYQVCLAAVGLVGDLCRALQSNIIPFCD 690
Query: 117 KLIDFLLEGLTTNKSTSTNRTY-IQCFAAICRQAGHRFAEHIERVMPLILKYSREEDD-- 173
+++ LLE L + + + F I G F +++E V+ + + S+ + D
Sbjct: 691 EVMQLLLENLGNENVHRSVKPQILSVFGDIALAIGGEFKKYLEVVLNTLQQASQAQVDKS 750
Query: 174 ---------ELREFCLQACEAFVQ----------RCPKEITPHIQSITEL 204
ELRE CL+A VQ + P ++ I
Sbjct: 751 DYDMVDYLNELRESCLEAYTGIVQGLKGDQENVHPDVMLVQPRVEFILSF 800
>d2vglb_ a.118.1.10 (B:) Adaptin beta subunit N-terminal fragment
{Human (Homo sapiens) [TaxId: 9606]}
Length = 579
Score = 62.5 bits (151), Expect = 4e-10
Identities = 73/520 (14%), Positives = 171/520 (32%), Gaps = 67/520 (12%)
Query: 528 VKALQCQLREKSIRTRQDCLALLRELMTSS-DKDFRFMATNDLMS----ELQK------- 575
+ L+ +L + R++ + + MT D F + M EL+K
Sbjct: 12 IFELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVNCMQTDNLELKKLVYLYLM 71
Query: 576 DSIKLDDDSERKVVKMLLRLLEDKNGEVQNLAVKCLGPLFKALTKIAASPLRIDLRPILT 635
+ K D V ++ ED N ++ LAV+ +G I + I
Sbjct: 72 NYAKSQPDMAIMAVNSFVKDCEDPNPLIRALAVRTMG--------------CIRVDKITE 117
Query: 636 DGIPILGSFLRKNQRALKLSTLLLLDTLLVNYPSAISTEMLNKVTVELAPLVSESDLHIA 695
L L+ ++ + + + L + + L L+++S+ +
Sbjct: 118 YLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLD---SLRDLIADSNPMVV 174
Query: 696 QLTLTLLTSIAKIQPNALVEPAAASILPQVLQIAK--SPLLQGAALTSMLEF-FKSLVLA 752
+ L+ I++ PN+ + + ++L + Q L + + K A
Sbjct: 175 ANAVAALSEISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLSNYNPKDDREA 234
Query: 753 ELPGLSFSELLNMLIAPVMTGTALHKQAFHSLAKCVAALAITVQREALPVVEKFLKELKT 812
+ + L+ + V+ F L + + ++ P L L +
Sbjct: 235 QSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNMLLKKLAP----PLVTLLS 290
Query: 813 NKDDAHQVTIVALSHLV-----------------MSCNLQLTIVALSHLVMSCNLQLYTK 855
+ + V + ++ +V + + + + L ++ + +
Sbjct: 291 GEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQ 350
Query: 856 LIDFLLEGLTTNKSTSTNRTYIQCFAAICRQAGHRFAEHIERVMPLILKYSREEDDELRE 915
++ L E T + +++ + + + ER + +L + + + + +
Sbjct: 351 VLAELKEYA-----TEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQ 405
Query: 916 FCLQACEAFVQRCPKEITPHIQSIGRHTDLTSVADLKQVILNAFTPTSEEVKSAASYTLG 975
+ ++ P + I ++ + D D + ++ +E + A L
Sbjct: 406 EAIVVIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERI-DNADELLE 464
Query: 976 SIAEIISWQSTSTSGVAQLQQFVPAIWAQLFLHC--ECQE 1013
S E +ST + AI +LFL E QE
Sbjct: 465 SFLEGFHDESTQVQ-----LTLLTAI-VKLFLKKPSETQE 498
Score = 53.2 bits (127), Expect = 2e-07
Identities = 49/424 (11%), Positives = 124/424 (29%), Gaps = 55/424 (12%)
Query: 1186 RNEITRLTTVKALTKIAASPLRIDLRPILTDGIPILGSFLRKNQRALKLSTLLLLDTLLV 1245
N + R V+ + I + I L L+ ++ + + + L
Sbjct: 95 PNPLIRALAVRTMGCIR-------VDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHD 147
Query: 1246 NYPSAISTEMLNKVTVELAPLVSESDLHIAQLTLTLLTSIAKIQPNALVEPAAASILPQI 1305
+ + L L+++S+ + + L+ I++ PN+ + + +
Sbjct: 148 INAQMVEDQGFLD---SLRDLIADSNPMVVANAVAALSEISESHPNSNLLDLNPQNINK- 203
Query: 1306 GRHTDLTSVADLKQVILNAFTPTSEEVKSAASYTLGSIAVGNLQQYVPFVLKEIENQPKR 1365
+L A +E + L + + ++ +
Sbjct: 204 ---------------LLTALNECTEWGQIFILDCLSNYNPKDDREAQSICERVTPRLSHA 248
Query: 1366 QYLLLHSLKEIISWQSTSTSGVAQLQQFVPAIWAQLFLHCECQEEGTRNVVAECLGKLTL 1425
++ S +++ + + A + E + V + +
Sbjct: 249 NSAVVLSAVKVLMKFLELLPKDSDYYNMLLKKLAPPLVTLLSGEPEVQYVALRNINLIVQ 308
Query: 1426 IDP---SNLLPRLQESLKSNSALMRTTVLTAVKFT-----------ISDQMTSSDKDFRF 1471
P + + + ++ + + T D DF
Sbjct: 309 KRPEILKQEIKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLAELKEYATEVDVDFV- 367
Query: 1472 MATNDLMSELQKDSIKLDDDSERKVVKMLLRLLEDKNGEVQNLAVKCLGPLVNKVKEFQV 1531
+ + + +IK++ +ER V LL L++ K V A+ + + K
Sbjct: 368 ---RKAVRAIGRCAIKVEQSAER-CVSTLLDLIQTKVNYVVQEAIVVIRDIFRKYPNKY- 422
Query: 1532 ETIVDALCSNMVSDKEQLRDISSIGLKTVISVVYCLGDRNSSSNMKIDTLAFTHTLLTTH 1591
E+I+ LC E L + + ++++ +G+ + + L
Sbjct: 423 ESIIATLC-------ENLDSLDEPDARA--AMIWIVGEYAERIDNADELLESFLEGFHDE 473
Query: 1592 PPAV 1595
V
Sbjct: 474 STQV 477
Score = 34.4 bits (78), Expect = 0.17
Identities = 22/167 (13%), Positives = 52/167 (31%), Gaps = 11/167 (6%)
Query: 35 CRRITGKLSTAIEKQEDVSVQLEALDILSDLLSRFGALLPSFHFVILTALLPQLSSPRQA 94
++ +L + DV +A+ + + ++ LL + +
Sbjct: 348 IAQVLAELKEYATE-VDVDFVRKAVRAIGRCAIKV----EQSAERCVSTLLDLIQTKVNY 402
Query: 95 VRKRTIVALSHLVMSCNLQLYTKLIDFLLEGLTTNKSTSTNRTYIQCFAAICRQAGHRFA 154
V + IV + + Y +I L E L + I
Sbjct: 403 VVQEAIVVIRDIFRK-YPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAE-----RI 456
Query: 155 EHIERVMPLILKYSREEDDELREFCLQACEAFVQRCPKEITPHIQSI 201
++ + ++ L+ +E +++ L A + P E +Q +
Sbjct: 457 DNADELLESFLEGFHDESTQVQLTLLTAIVKLFLKKPSETQELVQQV 503
Score = 29.7 bits (66), Expect = 3.5
Identities = 32/199 (16%), Positives = 66/199 (33%), Gaps = 33/199 (16%)
Query: 1435 LQESLKSNSALMRTTVLTAVKFTISDQMTSSDKDFRFMATNDLMS----ELQK------- 1483
L+ L + R AVK I+ D F + M EL+K
Sbjct: 15 LKAELNNEKKEKR---KEAVKKVIAAMTVGKDVSSLFPDVVNCMQTDNLELKKLVYLYLM 71
Query: 1484 DSIKLDDDSERKVVKMLLRLLEDKNGEVQNLAVKCLGPLVNKVKEFQVETIVDALCSNMV 1543
+ K D V ++ ED N ++ LAV+ +G + E + + L +
Sbjct: 72 NYAKSQPDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDK---ITEYLCEPLRKCLK 128
Query: 1544 SDKEQLRDISSIGLKTVI--------------SVVYCLGDRNSSSNMKIDTLAFTHTLLT 1589
+ +R +++ + + S+ + D N + + +A +
Sbjct: 129 DEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPM--VVANAVAALSEISE 186
Query: 1590 THPPAVFHPHIHILLPPVI 1608
+HP + + ++
Sbjct: 187 SHPNSNLLDLNPQNINKLL 205
>d2vgla_ a.118.1.10 (A:) Adaptin alpha C subunit N-terminal fragment
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 584
Score = 57.5 bits (138), Expect = 1e-08
Identities = 65/492 (13%), Positives = 159/492 (32%), Gaps = 55/492 (11%)
Query: 526 SLVKALQ-CQLREKSIRTRQDCLALLRELMTSSDKD-------------FRFMATNDLMS 571
+ ++ C+ +E I+ LA +R F F+ +D +
Sbjct: 7 VFISDIRNCKSKEAEIKRINKELANIRSKFKGDKALDGYSKKKYVCKLLFIFLLGHD-ID 65
Query: 572 ELQKDSIKL---DDDSERKVVKMLLRLLEDKNGEVQNLAVKCL-------GPLFKALTKI 621
+++ L + +E+++ + + +L + N E+ L + P F L
Sbjct: 66 FGHMEAVNLLSSNRYTEKQIGYLFISVLVNSNSELIRLINNAIKNDLASRNPTFMGLALH 125
Query: 622 AASPLRI-DLRPILTDGIPILGSFLRKNQRALKLSTLLLLDTLLVNYPSAISTEMLNKVT 680
+ + ++ IP + + + L LL L P +
Sbjct: 126 CIANVGSREMAEAFAGEIPKILVAGDTMDSVKQSAALCLL-RLYRTSPDLVPMGDWTS-- 182
Query: 681 VELAPLVSESDLHIAQLTLTLLTSIAKIQPNAL--VEPAAASILPQVLQIAKSPLLQGAA 738
+ L+++ L + +L+T++A+ P A S L +++ A + L
Sbjct: 183 -RVVHLLNDQHLGVVTAATSLITTLAQKNPEEFKTSVSLAVSRLSRIVTSASTDLQDYTY 241
Query: 739 LTSMLEFFKSLVL---AELPGLSFSELLNMLIAPVMTGTALHKQAFHSLAKCVAALAITV 795
+ +L P + L + T ++ S + V
Sbjct: 242 YFVPAPWLSVKLLRLLQCYPPPEDPAVRGRLTECLETILNKAQEPPKSKKVQHSNAKNAV 301
Query: 796 QREALPVVEKFLKELKTNKDDAHQVTIVALSHLVMSCNLQLTIVALSHLVMSC----NLQ 851
EA+ ++ ++ + L + L +AL + + +
Sbjct: 302 LFEAISLIIHH-----DSEPNLLVRACNQLGQFLQHRETNLRYLALESMCTLASSEFSHE 356
Query: 852 LYTKLIDFLLEGLTTNKSTSTNRTYIQCFAAICRQAGHRFAEHIERVMPLILKYSREEDD 911
I+ ++ L T + S + + A+C + + ++++ +L Y D
Sbjct: 357 AVKTHIETVINALKTERDVSVRQRAVDLLYAMCDR------SNAQQIVAEMLSYLETADY 410
Query: 912 ELREFCLQACEAFVQRCPKEITPHIQSIGRHTDLTSVAD--LKQVILNAFTPTSEEVKSA 969
+RE + ++ + T ++ +I +L +A + + +
Sbjct: 411 SIREEIVLKVAILAEKYAVDYTWYVDTI---LNLIRIAGDYVSEEVWYRVIQIVINRDDV 467
Query: 970 ASYTLGSIAEII 981
Y ++ E +
Sbjct: 468 QGYAAKTVFEAL 479
Score = 44.4 bits (104), Expect = 1e-04
Identities = 48/356 (13%), Positives = 107/356 (30%), Gaps = 53/356 (14%)
Query: 433 DDDMSWKVRRAAAKCLEAIIATRRDLIGDMYRLVSPPLIARFKEREENVKSDIFHAYMAL 492
D V+++AA CL + T DL+ ++ ++ V + L
Sbjct: 149 AGDTMDSVKQSAALCLLRLYRTSPDLVPMGDWT--SRVVHLLNDQHLGVVTAATSLITTL 206
Query: 493 L------------KGTRTFSPLTPSDPNQMDQEDSPVCLLSTQVPSLVKALQCQLREKSI 540
S + S + L++ LQC +
Sbjct: 207 AQKNPEEFKTSVSLAVSRLSRIVTSASTDLQDYTYYFVPAPWLSVKLLRLLQCYPPPEDP 266
Query: 541 RTRQDCLALLRELMT------SSDKDFRFMATNDLMSELQKDSIKLDDDSE--RKVVKML 592
R L ++ S K A N ++ E I D + + L
Sbjct: 267 AVRGRLTECLETILNKAQEPPKSKKVQHSNAKNAVLFEAISLIIHHDSEPNLLVRACNQL 326
Query: 593 LRLLEDKNGEVQNLAVKCLGPLFKALTKIAASPLRIDLRPILTDGIPILGSFLRKNQRAL 652
+ L+ + ++ LA++ + L + A I+ ++ + + ++
Sbjct: 327 GQFLQHRETNLRYLALESMCTLASSEFSHEAVKTHIET---------VINALKTERDVSV 377
Query: 653 KLSTLLLLDTLLVNYPSAISTEMLNKVTVELAPLVSESDLHIAQLTLTLLTSIA-KIQPN 711
+ + LL + ++ E+ + +D I + + + +A K +
Sbjct: 378 RQRAVDLLYAM-------CDRSNAQQIVAEMLSYLETADYSIREEIVLKVAILAEKYAVD 430
Query: 712 A---------LVEPAAASILPQVLQ-----IAKSPLLQGAALTSMLEFFKSLVLAE 753
L+ A + +V + +QG A ++ E ++ E
Sbjct: 431 YTWYVDTILNLIRIAGDYVSEEVWYRVIQIVINRDDVQGYAAKTVFEALQAPACHE 486
Score = 40.1 bits (93), Expect = 0.002
Identities = 24/155 (15%), Positives = 57/155 (36%), Gaps = 12/155 (7%)
Query: 51 DVSVQLEALDILSDLLSRFGALLPSFHFVILTALLPQLSSPRQAVRKRTIVALSHLVMSC 110
+V EA+ ++ S P+ L L +R + ++ L S
Sbjct: 298 KNAVLFEAISLIIHHDS-----EPNLLVRACNQLGQFLQHRETNLRYLALESMCTLASSE 352
Query: 111 -NLQLYTKLIDFLLEGLTTNKSTSTNRTYIQCFAAICRQAGHRFAEHIERVMPLILKYSR 169
+ + I+ ++ L T + S + + A+C + + ++++ +L Y
Sbjct: 353 FSHEAVKTHIETVINALKTERDVSVRQRAVDLLYAMCDR------SNAQQIVAEMLSYLE 406
Query: 170 EEDDELREFCLQACEAFVQRCPKEITPHIQSITEL 204
D +RE + ++ + T ++ +I L
Sbjct: 407 TADYSIREEIVLKVAILAEKYAVDYTWYVDTILNL 441
Score = 40.1 bits (93), Expect = 0.002
Identities = 52/369 (14%), Positives = 122/369 (33%), Gaps = 49/369 (13%)
Query: 1290 PNALVEPAAASILPQIGRH-TDLTSVADLKQVILNAFTPTSEEVKSAASYTLGSIAVGNL 1348
V+ +AA L ++ R DL + D +++ V +AA+ + ++A N
Sbjct: 152 TMDSVKQSAALCLLRLYRTSPDLVPMGDWTSRVVHLLNDQHLGVVTAATSLITTLAQKNP 211
Query: 1349 QQYVPFVLKEIENQPKRQYLLLHSLKEIISWQSTSTSGVAQLQQFVPAIWAQLFLHCECQ 1408
+++ V L + L I++ ST FVPA W + L
Sbjct: 212 EEFKTSV-----------SLAVSRLSRIVTSASTDLQD--YTYYFVPAPWLSVKLL---- 254
Query: 1409 EEGTRNVVAECLGKLTLIDPSNLLPRLQESLKSNSALMRTTVLTAVKFTISDQMTSSDKD 1468
L + + RL E L++ + + Q +++
Sbjct: 255 ---------RLLQCYPPPEDPAVRGRLTECLETILNKAQEPPKSK-----KVQHSNAKNA 300
Query: 1469 FRFMATNDLMSELQKDSIKLDDDSERKVVKMLLRLLEDKNGEVQNLAVKCLGPLVNK--- 1525
F A + ++ + + + L + L+ + ++ LA++ + L +
Sbjct: 301 VLFEAISLIIH------HDSEPNLLVRACNQLGQFLQHRETNLRYLALESMCTLASSEFS 354
Query: 1526 ---VKEFQVETIVDALCSNMVS-DKEQLRDISSIGL-KTVISVVYCLGD--RNSSSNMKI 1578
VK I VS + + + ++ +V + + +++
Sbjct: 355 HEAVKTHIETVINALKTERDVSVRQRAVDLLYAMCDRSNAQQIVAEMLSYLETADYSIRE 414
Query: 1579 DTLAFTHTLLTTHPPAVFHPHIHILLPPVIIIKTLIREVEMGPFKHTVDDGLDIRKAAFE 1638
+ + L + + ++ +L + I + E V + D++ A +
Sbjct: 415 EIVLKVAILAEKYAVD-YTWYVDTILNLIRIAGDYVSEEVWYRVIQIVINRDDVQGYAAK 473
Query: 1639 CMYTLLDTC 1647
++ L
Sbjct: 474 TVFEALQAP 482
Score = 32.4 bits (73), Expect = 0.55
Identities = 56/388 (14%), Positives = 108/388 (27%), Gaps = 93/388 (23%)
Query: 1386 GVAQLQQFVPAIWAQLFLHCECQEEGTRNVVAECLGKLTLIDPSNLLPRLQESLKSNSAL 1445
G+ L F+ I C+ +E + + L + + K + AL
Sbjct: 1 GMRGLAVFISDIRN-----CKSKEA-EIKRINKELANI------------RSKFKGDKAL 42
Query: 1446 MRTTVLTAVKFTISDQMTSSDKDFRFMATNDLMSELQKDSIKLDDDSERKVVKMLLRLLE 1505
+ V + + D DF M +L+S + +E+++ + + +L
Sbjct: 43 DGYSKKKYVCKLLFIFLLGHDIDFGHMEAVNLLSS--------NRYTEKQIGYLFISVLV 94
Query: 1506 DKNGEVQNLAVKCLGPLVNKVKEFQVETIVDALCSNMVSDKEQLRDISSIGLKTVISVVY 1565
+ N E+ L + D+
Sbjct: 95 NSNSELIRLINNAI-----------------------------KNDL------------- 112
Query: 1566 CLGDRNSSSNMKIDTLAFTHTLLTTHPPAVFHPHIHILLPPVIIIKTLIREVEMGPFKHT 1625
+S N LA H + + E+
Sbjct: 113 ------ASRNPTFMGLAL-HCIANVGSREMAEAF--------------AGEIPKILVAGD 151
Query: 1626 VDDGLDIRKAAFECMYTLLDTCLDRVDMFEFLNHLESGLRDHYDIKMLTYLMLA-RLAQM 1684
D ++++A C+ L T D V M ++ + + L D + + L LAQ
Sbjct: 152 TMD--SVKQSAALCLLRLYRTSPDLVPMGDWTSRVVHLLNDQHLGVVTAATSLITTLAQK 209
Query: 1685 TPAALLQRLERIVEPLRNTVT-LKVKANSVKQEYEKQDELKRSAMRAVAALLTIQDADKN 1743
P + V L VT + L +R + +D
Sbjct: 210 NPEEFKTSVSLAVSRLSRIVTSASTDLQDYTYYFVPAPWLSVKLLRLLQCYPPPEDPAVR 269
Query: 1744 PALNDFVATIKNSPELQTIFDSMQKDSS 1771
L + + TI N + +Q ++
Sbjct: 270 GRLTECLETILNKAQEPPKSKKVQHSNA 297
Score = 31.3 bits (70), Expect = 1.4
Identities = 27/159 (16%), Positives = 55/159 (34%), Gaps = 10/159 (6%)
Query: 33 NVCRRITGKLSTAIEKQEDVSVQLEALDILSDLLSRFGALLPSFHFVILTALLPQLSSPR 92
N+ R +L ++ + + +++ AL+ + L S + + I T + +
Sbjct: 317 NLLVRACNQLGQFLQHR-ETNLRYLALESMCTLASSEFSH-EAVKTHIETVINALKTERD 374
Query: 93 QAVRKRTIVALSHLVMSCNLQLYTKLIDFLLEGLTTNKSTSTNRTYIQCFAAICRQAGHR 152
+VR+R + L + N Q ++ +L L T S + A + +
Sbjct: 375 VSVRQRAVDLLYAMCDRSNAQQ---IVAEMLSYLETA-DYSIREEIVLKVAILA----EK 426
Query: 153 FAEHIERVMPLILKYSREEDDELREFCLQACEAFVQRCP 191
+A + IL R D + E V
Sbjct: 427 YAVDYTWYVDTILNLIRIAGDYVSEEVWYRVIQIVINRD 465
>d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 861
Score = 52.1 bits (123), Expect = 6e-07
Identities = 82/789 (10%), Positives = 204/789 (25%), Gaps = 55/789 (6%)
Query: 693 HIAQLTLTLLTSIAKIQPNALVEPAAASILPQVLQIAKSPLLQGAALTSMLEFFKSLVLA 752
+ A+ + A I L S + + + ++
Sbjct: 68 ELVSKDSVKTQQFAQRWITQVSPEAKNQIKTNALTALVSI--EPRIANAAAQLIAAIADI 125
Query: 753 ELPGLSFSELLNMLIAPVMTGTALHKQ--AFHSLAKCVAALAITVQREALPVVEKFLKEL 810
ELP ++ EL+ +++ + + + +L + + + L +
Sbjct: 126 ELPHGAWPELMKIMVDNTGAEQPENVKRASLLALGYMCESAD-PQSQALVSSSNNILIAI 184
Query: 811 KTNKDDAHQVTIVALSHLVMSCNLQLTIVALSHLVMSCNLQLYTKLIDFLLEGLTTNKST 870
V L+ L + + I N + T +
Sbjct: 185 VQGAQSTETSKAVRLAALNALADSLIFIKNNMEREGERNYLMQVVCE------ATQAEDI 238
Query: 871 STNRTYIQCFAAICRQAGHRFAEHIERVMPLILKYSREEDDELREFCLQACEAFVQRCPK 930
C I + ++E+ + + + + ++ + E + C +
Sbjct: 239 EVQAAAFGCLCKIMSKYYTFMKPYMEQALYALTIATMKSPND--KVASMTVEFWSTICEE 296
Query: 931 EITPHIQSIGRHTDLTSVADLKQVILNAFTPTSEEVKSAASYTLGSIAEIISWQSTSTSG 990
EI + + + P + + + +S + +
Sbjct: 297 EIDIAYELAQFPQSPLQSYNFALSSIKDVVPNLLNLLTRQNEDPEDDDWNVSMSAGACLQ 356
Query: 991 VAQLQQFVPAIWAQLFLHCECQEEGTRNVVAECLGKLTLI----DPSNLLPRLQESLKSN 1046
+ + L + + I D + ++L S
Sbjct: 357 LFAQNCGNHILEPVLEFVEQNITADNWRNREAAVMAFGSIMDGPDKVQRTYYVHQALPSI 416
Query: 1047 SALMRTTHQSNQTFNVIIQRNDIHNHNEETSFIYSFYYFLLSPVIASVGDNFYKITAEAL 1106
LM V ++ L V+ + A
Sbjct: 417 LNLMNDQS-----LQVKETTAWCIGRIADSVAESIDPQQHLPGVVQACLIGLQDHPKVAT 471
Query: 1107 LVLQQFVKVIRPLTSPSSYDFAPFTSDIYQCTLVRLKAADIDQEVKERAISCMGQIICNL 1166
+ ++ L + F + + D + + A S + ++
Sbjct: 472 NCSWTIINLVEQLAEATPSPIYNFYPALVDGLIGAANRIDNEFNARASAFSALTTMVEYA 531
Query: 1167 GDYLKSELPVCLPILLDRLRNEITRLTTVKALTKIAASPLRIDLRPILTDGIPILGSFLR 1226
D + ++D+L T+ L+ + ++ + +L + +R
Sbjct: 532 TDTVAETSASISTFVMDKLGQ------TMSVDENQLTLEDAQSLQELQSNILTVLAAVIR 585
Query: 1227 KNQRALKLSTLLLLDTLLVNYPSAISTEMLNKVTVELAPLVSESDLHIAQLTLTLLTSIA 1286
K+ +++ +L+ S + + V ++ L + + T +
Sbjct: 586 KSPSSVEPVADMLMGLFFRLLEKKDSAFIEDDVFYAISALAASLGKGFEKYLETFSPYLL 645
Query: 1287 KI--QPNALVEPAAASILPQIGRHTD---LTSVADLKQVILNAFTP--TSEEVKSAASYT 1339
K Q ++ V A + I + + V+ + E+K A
Sbjct: 646 KALNQVDSPVSITAVGFIADISNSLEEDFRRYSDAMMNVLAQMISNPNARRELKPAVLSV 705
Query: 1340 LGSIAV---GNLQQYVPFVLK--------EIENQPKRQYLLLHSLKEIISWQSTST---- 1384
G IA + Y+ ++ + EN + E +
Sbjct: 706 FGDIASNIGADFIPYLNDIMALCVAAQNTKPENGTLEALDYQIKVLEAVLDAYVGIVAGL 765
Query: 1385 -SGVAQLQQFVPAIWAQLFLHCE----CQEEGTRNVVAECLGKLTLIDPSNLLPRLQESL 1439
L +V I+ + E E+ T +G + + P + +
Sbjct: 766 HDKPEALFPYVGTIFQFIAQVAEDPQLYSEDATSRAAVGLIGDIAAMFPDGSIKQFYGQD 825
Query: 1440 KSNSALMRT 1448
+ RT
Sbjct: 826 WVIDYIKRT 834
Score = 52.1 bits (123), Expect = 6e-07
Identities = 87/713 (12%), Positives = 183/713 (25%), Gaps = 96/713 (13%)
Query: 537 EKSIRTRQDCLALLRELMTSSDKDFRFMATNDLMSELQKDSIKLDDDSERKVVKMLLRLL 596
+ R L+ + S D ++ ++ +++ ++ L L
Sbjct: 52 NTKLEGRILAALTLKNELVSKDSVKTQQFAQRWIT-------QVSPEAKNQIKTNALTAL 104
Query: 597 EDKNGEVQNLAVKCLGPLFKALTKIAASPLRIDLRPILTDGIPILGSFLRKNQRALKLST 656
+ N A + + + A P + + I+ Q
Sbjct: 105 VSIEPRIANAAAQLIAAIADIELPHGAWP----------ELMKIMVDNTGAEQPENVKRA 154
Query: 657 LLLLDTLLVNYPSAISTEMLNKVTVELAPLVSESDLHIAQLTLTLLTSIAKIQPNALVEP 716
LL L + P + + ++ + + V
Sbjct: 155 SLLA---------------LGYMCESADPQSQALVSSSNNILIAIVQGAQSTETSKAVRL 199
Query: 717 AAASILPQVLQIAKSPLLQGAALTSMLEFFKSLVLAELPGL---------SFSELLNMLI 767
AA + L L K+ + + +++ AE + +
Sbjct: 200 AALNALADSLIFIKNNMEREGERNYLMQVVCEATQAEDIEVQAAAFGCLCKIMSKYYTFM 259
Query: 768 APVMTGT--ALHKQAFHSLAKCVAALAITVQREALPVVEKFLKELKTNKDDAHQVTIVAL 825
P M AL S VA++ + EL Q AL
Sbjct: 260 KPYMEQALYALTIATMKSPNDKVASMTVEFWSTICEEEIDIAYELAQFPQSPLQSYNFAL 319
Query: 826 SHLVMSCNLQLTIVALSHLVMSCNLQLYTKLIDFLLEGLTTNKSTSTNRTYIQCFAAICR 885
S + L ++ + + + L+ N ++
Sbjct: 320 SSIKDVVPNLLNLLTRQNEDPEDDDWNVSMSAGACLQLFAQNCGNHILEPVLEFVEQNIT 379
Query: 886 QAGHR--------------------FAEHIERVMPLILKYSREEDDELREFCLQACEAFV 925
R ++ + +P IL ++ +++E
Sbjct: 380 ADNWRNREAAVMAFGSIMDGPDKVQRTYYVHQALPSILNLMNDQSLQVKETTAWCIGRIA 439
Query: 926 QRCPKEITPHIQSIGRHTDL-TSVADLKQVILNAFTPTSEEVKSAASYTLGSIAEIISWQ 984
+ I P G + D +V N V+ A T I
Sbjct: 440 DSVAESIDPQQHLPGVVQACLIGLQDHPKVATNCSWTIINLVEQLAEATPSPIYNFYPAL 499
Query: 985 STSTSGVAQLQQFVPAIWAQLFLHCECQEEGTRNVVAECLGKLTLIDPSNLLPRLQESLK 1044
G A A F E + VAE ++ L +
Sbjct: 500 VDGLIGAANRIDNEFNARASAFSALTTMVEYATDTVAETSASISTFVMDKLGQTMSVDEN 559
Query: 1045 SNSALMRTTHQSNQT--------------------FNVIIQRNDIHNHNEETSFIYSFYY 1084
+ + Q Q+ ++++ ++++FI +
Sbjct: 560 QLTLEDAQSLQELQSNILTVLAAVIRKSPSSVEPVADMLMGLFFRLLEKKDSAFIEDDVF 619
Query: 1085 FLLSPVIASVGDNFYK------------ITAEALLVLQQFVKVIRPLTSPSSYDFAPFTS 1132
+ +S + AS+G F K + V V I +++ DF ++
Sbjct: 620 YAISALAASLGKGFEKYLETFSPYLLKALNQVDSPVSITAVGFIADISNSLEEDFRRYSD 679
Query: 1133 DIYQCTLVRLKAADIDQEVKERAISCMGQIICNLGDYLKSELPVCLPILLDRL 1185
+ + + +E+K +S G I N+G L + + +
Sbjct: 680 AMMNVLAQMISNPNARRELKPAVLSVFGDIASNIGADFIPYLNDIMALCVAAQ 732
Score = 50.2 bits (118), Expect = 2e-06
Identities = 78/762 (10%), Positives = 194/762 (25%), Gaps = 78/762 (10%)
Query: 69 FGALLPSFHFVILTALLPQLSSPRQAVRKRTIVALSHLV-MSCNLQLYTKLIDFLLEGLT 127
+ P I T L L S + ++ + + + +L+ +++
Sbjct: 85 ITQVSPEAKNQIKTNALTALVSIEPRIANAAAQLIAAIADIELPHGAWPELMKIMVDNTG 144
Query: 128 TNKSTSTNRTYIQCFAAICRQAGHRFAEHIERVMPLILK-----YSREEDDELREFCLQA 182
+ + R + +C A + + +++ S E +R L A
Sbjct: 145 AEQPENVKRASLLALGYMCESADPQSQALVSSSNNILIAIVQGAQSTETSKAVRLAALNA 204
Query: 183 CEAFVQRCPKEITPHIQSITELCLTYITYDPNYNYEDEEEGLGG--EGGGEGMDTEEEDG 240
+ + + ++ E + M
Sbjct: 205 LADSL-----IFIKNNMEREGERNYLMQVVCEATQAEDIEVQAAAFGCLCKIMSKYYTFM 259
Query: 241 EDEGEDDNEY---SDDDDMSWKVRRAAAKCLEAIIATRRDLIGDMYRLVSPPLIARFKER 297
+ E + + KV + I D+ ++ + PL +
Sbjct: 260 KPYMEQALYALTIATMKSPNDKVASMTVEFWSTICEEEIDIAYELAQFPQSPLQSYNFAL 319
Query: 298 EENVKSDIFHAYMALLKGTRTFSPLTPSDPNQMDQEDSPLCLLSTQVPSLVKALQCQLRE 357
D+ + LL + + L + L L+ +
Sbjct: 320 SSI--KDVVPNLLNLLTRQNEDPEDDDWNVSMSAGACLQLFAQNCGNHILEPVLEFVEQN 377
Query: 358 KSIRTRQDCLALLRELVQTLPGCLAPSLPALIPDV----------TSVAEWDEEEGLGGE 407
+ ++ A + + G + S+ + G
Sbjct: 378 ITADNWRNREAAVMAFGSIMDGPDKVQRTYYVHQALPSILNLMNDQSLQVKETTAWCIGR 437
Query: 408 GGGEGMDTEEEDGEDEGEDDNEYSDDDDMSWKVRRAAAKCLEAIIATRRDLIGDMYRLVS 467
++ + G D + + + +Y
Sbjct: 438 IADSVAESIDPQQHLPGVVQACLIGLQDHPKVATNCSWTIINLVEQLAEATPSPIYNFYP 497
Query: 468 PPLIARFK-----EREENVKSDIFHAYMALLKG-----------------TRTFSPLTPS 505
+ + E N ++ F A +++ + ++
Sbjct: 498 ALVDGLIGAANRIDNEFNARASAFSALTTMVEYATDTVAETSASISTFVMDKLGQTMSVD 557
Query: 506 DPNQMDQEDSPVCLLSTQVPSLVKALQCQLREKSIRTRQDCLALLRELMTSSDKDFRFMA 565
+ ++ + L + + +++ A+ + + L L+ D F
Sbjct: 558 ENQLTLEDAQSLQELQSNILTVLAAVIRKSPSSVEPVADMLMGLFFRLLEKKDSAFIEDD 617
Query: 566 TNDLMSELQKDSIKLDDDSERKVVKMLLRLLEDKNGEVQNLAVKCLGPLFKALTKIAASP 625
+S L K + LL+ L + V AV + + +L +
Sbjct: 618 VFYAISALAASLGKGFEKYLETFSPYLLKALNQVDSPVSITAVGFIADISNSLEE----- 672
Query: 626 LRIDLRPILTDGIPILGSFLRKNQ--RALKLSTLLLLDTLLVNYPSA-------ISTEML 676
D R + +L + R LK + L + + N + I +
Sbjct: 673 ---DFRRYSDAMMNVLAQMISNPNARRELKPAVLSVFGDIASNIGADFIPYLNDIMALCV 729
Query: 677 NKVTVELAPLVSESDLHIAQLTLTLLTSIAKI-----QPNALVEPAAASILPQVLQIAKS 731
+ E+ + ++ +L + I + P +I + Q+A+
Sbjct: 730 AAQNTKPENGTLEALDYQIKVLEAVLDAYVGIVAGLHDKPEALFPYVGTIFQFIAQVAED 789
Query: 732 PLLQG------AALTSMLEFFKSLVLAELPGLSFSELLNMLI 767
P L AA+ + + + + + I
Sbjct: 790 PQLYSEDATSRAAVGLIGDIAAMFPDGSIKQFYGQDWVIDYI 831
>d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein
phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId:
9606]}
Length = 588
Score = 47.5 bits (111), Expect = 2e-05
Identities = 61/590 (10%), Positives = 153/590 (25%), Gaps = 75/590 (12%)
Query: 42 LSTAIEKQEDVSVQLEALDILSDLLSRFGALLPSFHFVILTALLPQLSSPRQAVRKRTIV 101
L+ I +++V L + L + G P + +L L + VR + +
Sbjct: 54 LTDTIYDEDEV--LLALAEQLGTFTTLVGG--PEYVHCLLPPLESLATVEETVVRDKAVE 109
Query: 102 ALSHLVMSCNLQLYTKLIDFLLEGLTTNKSTSTNRTYIQCFAAICRQAGHRFAEHIERVM 161
+L + + L++ L ++ + F+ + +
Sbjct: 110 SLRAISHEHSPSDLEAHFVPLVKRLAGGDWFTSRTSACGLFSVC---YPRVSSAVKAELR 166
Query: 162 PLILKYSREEDDELREFCLQACEAFVQRCPKEITPHIQSITELCLTYITYDPNYNYEDEE 221
++ +R F + + +++S + + D +
Sbjct: 167 QYFRNLCSDDTPMVRRAAASKLGEFAKVLELD---NVKSEIIPMFSNLASDEQDSVRLLA 223
Query: 222 EGLGGEGGGEGMDTEEEDGEDEGEDDNEYSDDDDMSWKVRRAAAKCLEAIIATRRDLIGD 281
++ + +D SW+VR A + I
Sbjct: 224 VEACVNI----AQLLPQEDLEALVMPTLRQAAEDKSWRVRYMVADKFTELQKAVGPEITK 279
Query: 282 MYRLVSPPLIARFKEREENVKSDIFHAYMALLKGTRTFSPLTPSDPNQMDQEDSPLCLLS 341
+ P K+ E V++ H + C +
Sbjct: 280 TDLV--PAFQNLMKDCEAEVRAAASHKVKEFCENLS------------------ADCREN 319
Query: 342 TQVPSLVKALQCQLREKSIRTRQDCLALLRELVQTLPGCLAPSLPALIPDVTSVAEWDEE 401
+ ++ ++ + + + + +++ L L + E E
Sbjct: 320 VIMSQILPCIKELVSDANQHVKSALASVIMGLSPILGKDNTIEHLLPLFLAQLKDECPEV 379
Query: 402 EGLGGEGGGEGMDTEEEDGEDEGEDDNEYSDDDDMSWKVRRAAAKCLEAIIATRRDLIGD 461
+ + +D W+VR A + + + L +
Sbjct: 380 RLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQ---LGVE 436
Query: 462 MYRLVSPPLIARFKEREENVKSDIFHAYMALLKGTRTFSPLTPSDPNQMDQEDSPVCLLS 521
+ L ++V + A L K F
Sbjct: 437 FFDEKLNSL--CMAWLVDHVYAIREAATSNLKKLVEKFGK-------------------E 475
Query: 522 TQVPSLVKALQCQLREKSIRTRQDCLALLRELMTSSDKDFRFMATNDLMSELQKDSIKL- 580
+++ + + + R L + L +D + + D +
Sbjct: 476 WAHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVCGQDITTKHMLPTVLRMAGDPVANV 535
Query: 581 ----------------DDDSERKVVKMLLRLLEDKNGEVQNLAVKCLGPL 614
+ + +V +L +L +D++ +V+ A + L L
Sbjct: 536 RFNVAKSLQKIGPILDNSTLQSEVKPILEKLTQDQDVDVKYFAQEALTVL 585
Score = 35.2 bits (79), Expect = 0.083
Identities = 22/173 (12%), Positives = 53/173 (30%), Gaps = 26/173 (15%)
Query: 1372 SLKEIISWQSTSTSGVAQLQQFVPAIWAQLFLHCECQEEGTRNVVAECLGKLTLIDP--- 1428
++ I +G ++ F + + R L KL
Sbjct: 417 RVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATSNLKKLVEKFGKEW 476
Query: 1429 --SNLLPRLQESLKSNSALMRTTVLTAVKFTISDQMTSSDKDFRFMATNDLMSELQKDSI 1486
+ ++P++ + L R T L + +S+ + + + D +
Sbjct: 477 AHATIIPKVLAMSGDPNYLHRMTTLFCIN-VLSEVCGQDITTKHML---PTVLRMAGDPV 532
Query: 1487 KL-----------------DDDSERKVVKMLLRLLEDKNGEVQNLAVKCLGPL 1522
+ + +V +L +L +D++ +V+ A + L L
Sbjct: 533 ANVRFNVAKSLQKIGPILDNSTLQSEVKPILEKLTQDQDVDVKYFAQEALTVL 585
Score = 32.1 bits (71), Expect = 0.78
Identities = 64/505 (12%), Positives = 155/505 (30%), Gaps = 34/505 (6%)
Query: 435 DMSWKVRRAAAKCLEAIIATRRDLIGDMYRLVSPPLIARFKEREENVKSDIFHAYMALLK 494
VR A + L AI + PL+ R + ++
Sbjct: 98 VEETVVRDKAVESLRAISH---EHSPSDLEAHFVPLVKRLAGGDWFTSRTSACGLFSVC- 153
Query: 495 GTRTFSPLTPSDPNQMDQEDSPVCLLSTQVPSLVKALQCQLREKSIRTRQDCLALLRELM 554
+ ++ + ++ Q +C T + A + K + ++
Sbjct: 154 ----YPRVSSAVKAELRQYFRNLCSDDTPMVRRAAASKLGEFAKVLELDNVKSEIIPMFS 209
Query: 555 TSSDKDFRFMATNDLMSELQKDSIKLDDDSERKVVKMLLRLLEDKNGEVQNLAVKCLGPL 614
+ + + + + + + +D E V+ L + EDK+ V+ + L
Sbjct: 210 NLASDEQDSVRLLAVEACVNIAQLLPQEDLEALVMPTLRQAAEDKSWRVRYMVADKFTEL 269
Query: 615 FKALTKIAASPLRIDL-------------RPILTDGIPILGSFLRKNQRALKLSTLLLLD 661
KA+ + + + + +S +L
Sbjct: 270 QKAVGPEITKTDLVPAFQNLMKDCEAEVRAAASHKVKEFCENLSADCRENVIMSQILPCI 329
Query: 662 TLLVNYPSAISTEMLNKVTVELAPLVSESDLHIAQLTLTLLTSIAKIQPNALVEPAAASI 721
LV+ + L V + L+P++ + + L L L + L +
Sbjct: 330 KELVSDANQHVKSALASVIMGLSPILGKDNTIEHLLPLFLAQLKDECPEVRLNIISNLDC 389
Query: 722 LPQVLQIAKSPLLQGAALTSMLEFFKSLVLAELPGLSFSELLNMLIAPVMTGTALHKQAF 781
+ +V+ I + A+ + E K V + L+A + ++
Sbjct: 390 VNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIEY------MPLLAGQLGVEFFDEKLN 443
Query: 782 HSLAKCVAALAITVQREALPVVEKFLKELKTNKDDAHQVTIVALSHLVMSCNL---QLTI 838
+ ++ A ++K +++ K+ AH I + + N T+
Sbjct: 444 SLCMAWLVDHVYAIREAATSNLKKLVEKF--GKEWAHATIIPKVLAMSGDPNYLHRMTTL 501
Query: 839 VALSHLVMSCNLQLYTKLIDFLLEGLTTNKSTSTNRTYIQCFAAICRQAGHRFAEHIERV 898
++ L C + TK + + + + + + I + V
Sbjct: 502 FCINVLSEVCGQDITTKHMLPTVLRMAGDPVANVRFNVAKSLQKIGPILDNS--TLQSEV 559
Query: 899 MPLILKYSREEDDELREFCLQACEA 923
P++ K ++++D +++ F +A
Sbjct: 560 KPILEKLTQDQDVDVKYFAQEALTV 584
Score = 30.5 bits (67), Expect = 2.2
Identities = 75/620 (12%), Positives = 166/620 (26%), Gaps = 76/620 (12%)
Query: 581 DDDSERKVVKMLLRLLEDKNGEVQNLAVKCLGPLFKALTKIAASPLRIDLRPILTDGIP- 639
D D + +L+ L +++ +++ ++K L + AL R +L P LTD I
Sbjct: 4 DGDDSLYPIAVLIDELRNEDVQLRLNSIKKLSTIALALGVERT---RSELLPFLTDTIYD 60
Query: 640 ----------ILGSFLRKNQRALKLSTLLLLDTLLVNYPSAISTEMLNKVTVELAPLVSE 689
LG+F + LL L + + + ++ S
Sbjct: 61 EDEVLLALAEQLGTFTTLVGGPEYVHCLLPPLESLATVEETVVRDKAVESLRAISHEHSP 120
Query: 690 SDL--HIAQLTLTLLTSIAKIQPNALVEPAAASILPQVLQIAKSPLLQGAALTSMLEFFK 747
SDL H L L +A + S + + ++F+
Sbjct: 121 SDLEAHFVPLVKRLAGG-----DWFTSRTSACGLFSVCYPRVSSAVKA-----ELRQYFR 170
Query: 748 SLVLAELPGLSFSELLNML-IAPVMTGTALHKQAFHSLAKCVAALAITVQREALPVVEKF 806
+L + P + + + A V+ + + + + +V+ A+
Sbjct: 171 NLCSDDTPMVRRAAASKLGEFAKVLELDNVKSEIIPMFSNLASDEQDSVRLLAVEACVNI 230
Query: 807 LKELKTNKDDAHQVTIVALSHLVMSCNLQLTIVALSHLVMSCNLQLYTKLIDFLLEGLTT 866
+ ++D + + L + ++ + L+
Sbjct: 231 AQ--LLPQEDLEALVMPTLRQAAEDKSWRVRYMVADKFTELQKAVGPEITKTDLVPAFQN 288
Query: 867 NKSTSTNRTYIQCFAAICR-----QAGHRFAEHIERVMPLILKYSREEDDELREFCLQAC 921
+ A R + +++P I + + + ++
Sbjct: 289 LMKDCEAEVRAAASHKVKEFCENLSADCRENVIMSQILPCIKELVSDANQHVKSALASVI 348
Query: 922 EAFVQRCPKEIT--------------PHIQSIGRHTDLTSVADLKQVILNAFTPTSEEVK 967
K+ T + + I +
Sbjct: 349 MGLSPILGKDNTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIV 408
Query: 968 SAASYTLGSIAEIISWQSTSTSGVAQLQQFVPAIWAQLFLHCECQEEGTRNVVAECLGKL 1027
A + I +G ++ F + + R L KL
Sbjct: 409 ELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATSNLKKL 468
Query: 1028 TLIDP-----SNLLPRLQESLKSNSALMRTTHQSNQTFNVIIQRNDIHNHNEETSFIYSF 1082
+ ++P++ + L R T + NV+ + +
Sbjct: 469 VEKFGKEWAHATIIPKVLAMSGDPNYLHRMT--TLFCINVLSEVCGQDITTKH------- 519
Query: 1083 YYFLLSPVIASVGDNFYKITAEALLVLQQFVKVIRPLTSPSSYDFAPFTSDIYQCTLVRL 1142
+L V+ GD + LQ+ ++ T + L +L
Sbjct: 520 ---MLPTVLRMAGDPVANVRFNVAKSLQKIGPILDNSTL----------QSEVKPILEKL 566
Query: 1143 KAADIDQEVKERAISCMGQI 1162
D D +VK A + +
Sbjct: 567 T-QDQDVDVKYFAQEALTVL 585
>d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId:
9606]}
Length = 458
Score = 37.9 bits (86), Expect = 0.010
Identities = 42/334 (12%), Positives = 99/334 (29%), Gaps = 37/334 (11%)
Query: 691 DLHIAQLTLTLLTSIAKIQPNALVEPAAASILPQVLQIAK----SPLLQGAALTSMLEFF 746
H+ + TL + I + ++ + IL ++Q + S ++ AA ++L
Sbjct: 142 TEHMKESTLEAIGYICQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSL 201
Query: 747 KSLVLAELPGLSFSELLNMLIAPVMTG-TALHKQAFHSLAKCVAALAITVQREALPVVEK 805
+ ++ ++ T + A +L K ++ ++ P +
Sbjct: 202 EFTKANFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQYMETYMGPALFA 261
Query: 806 FLKELKTNKDDA---------HQVTIVALSHLVMSCNLQLTIVALSHLVMSCNLQLYTKL 856
E + D V + + + H L
Sbjct: 262 ITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEHTSKFYAKGALQYL 321
Query: 857 IDFLLEGLT--TNKSTSTNRTYIQCFAAICRQAGHRFAEHI-ERVMPLILKYSREEDDEL 913
+ L + LT + + + I V+P I ++ + D
Sbjct: 322 VPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCEDDIVPHVLPFIKEHIKNPDWRY 381
Query: 914 REFCLQACEAFVQRC-PKEITPHIQSIGRHTDLTSVADLKQVILNAFTPTSEEVKSAASY 972
R+ + A ++ P ++ P + ++ S V+ A++
Sbjct: 382 RDAAVMAFGCILEGPEPSQLKPLVIQA------------MPTLIELMKDPSVVVRDTAAW 429
Query: 973 TLGSIAEIISWQSTSTSGVAQLQQFVPAIWAQLF 1006
T+G I E++ A ++ + L
Sbjct: 430 TVGRICELLPEA-------AINDVYLAPLLQCLI 456
Score = 34.0 bits (76), Expect = 0.16
Identities = 24/179 (13%), Positives = 55/179 (30%), Gaps = 2/179 (1%)
Query: 461 DMYRLVSPPLIARFKEREENVKSDIFHAYMALLKGTRTFSPLTPSDPNQMDQEDSPVCLL 520
+ + V + E E + + + L P + ++D
Sbjct: 280 EFWSNVCDEEMDLAIEASEAAEQGRPPEHTSKFYAKGALQYLVPILTQTLTKQDENDDDD 339
Query: 521 STQVPSLVKALQCQLREK-SIRTRQDCLALLRELMTSSDKDFRFMATNDLMSELQKDSIK 579
L L ++E + + D +R A L+
Sbjct: 340 DWNPCKAAGVCLMLLATCCEDDIVPHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPS 399
Query: 580 LDDDSERKVVKMLLRLLEDKNGEVQNLAVKCLGPLFKALTKIAASPLRID-LRPILTDG 637
+ + L+ L++D + V++ A +G + + L + A + + + L L +G
Sbjct: 400 QLKPLVIQAMPTLIELMKDPSVVVRDTAAWTVGRICELLPEAAINDVYLAPLLQCLIEG 458
Score = 32.1 bits (71), Expect = 0.74
Identities = 30/294 (10%), Positives = 80/294 (27%), Gaps = 20/294 (6%)
Query: 1124 SYDFAPFTSDIYQCTLVRLKAADIDQEVKERAISCMGQIICNLGDYLK--SELPVCLPIL 1181
+++I + ++ + VK A + + + SE + ++
Sbjct: 162 PEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKANFDKESERHFIMQVV 221
Query: 1182 LDRLRNEIT--RLTTVKALTKIAASPLRIDLRPILTDGIPILGSFLRKNQRALKLSTLLL 1239
+ + T R+ ++ L KI + + + I ++ + + L +
Sbjct: 222 CEATQCPDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSDIDEVALQGIEF 281
Query: 1240 LDTL-------LVNYPSAISTEMLNKVTVELAPLVSESDLHIAQLTLTLLTSIAKIQPNA 1292
+ + A + T + + L +
Sbjct: 282 WSNVCDEEMDLAIEASEAAEQGRPPEHTSKFYAKGALQYLVPILTQTLTKQDENDDDDDW 341
Query: 1293 LVEPAAASILPQIGRHTDLTSVADLKQVILNAFTPTSEEVKSAASYTLGSIAVG------ 1346
AA L + + V + I + AA G I G
Sbjct: 342 NPCKAAGVCLMLLATCCEDDIVPHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQL 401
Query: 1347 --NLQQYVPFVLKEIENQ-PKRQYLLLHSLKEIISWQSTSTSGVAQLQQFVPAI 1397
+ Q +P +++ +++ + ++ I + L + +
Sbjct: 402 KPLVIQAMPTLIELMKDPSVVVRDTAAWTVGRICELLPEAAINDVYLAPLLQCL 455
Score = 29.4 bits (64), Expect = 4.8
Identities = 29/238 (12%), Positives = 67/238 (28%), Gaps = 28/238 (11%)
Query: 92 RQAVRKRTIVALSHLVMSCNLQLYTKLIDFLLEGLTTNKSTSTNRTYIQCFAAICRQAGH 151
+ A + +L + + + I ++ T T +Q I
Sbjct: 190 KLAATNALLNSLEFTKANFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQ 249
Query: 152 RFAEHIERVMPLILKYSREEDDELREFCLQACEAFVQRCPKEITPHIQSITELCLTYITY 211
++ + I + + D + E LQ E + C +E+ I++
Sbjct: 250 YMETYMGPALFAITIEAMKSDID--EVALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPE 307
Query: 212 DPNYNYEDEEEGLGGEGGGEGMDTEEEDGEDEGEDDNEYSDD------------------ 253
+ Y + + ++E+ +D+ + + +
Sbjct: 308 HTSKFYAKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCEDDIVPHVL 367
Query: 254 -------DDMSWKVRRAAAKCLEAII-ATRRDLIGDMYRLVSPPLIARFKEREENVKS 303
+ W+ R AA I+ + + P LI K+ V+
Sbjct: 368 PFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLVIQAMPTLIELMKDPSVVVRD 425
Score = 29.0 bits (63), Expect = 6.1
Identities = 49/434 (11%), Positives = 103/434 (23%), Gaps = 41/434 (9%)
Query: 81 LTALLPQLSSPRQAVRKRT---------------IVALSHLVMSCNLQLYTKLI-DFLLE 124
L +L + SP + + +V LS ++ + ++ ++
Sbjct: 2 LITILEKTVSPDRLELEAAQKFLERAAVENLPTFLVELSRVLANPGNSQVARVAAGLQIK 61
Query: 125 GLTTNKSTSTNRTYIQCFAAICRQAGHRFAEHIERVMPLILKYSREEDDELREFCLQACE 184
T+K Y Q + AI A V +L+ E
Sbjct: 62 NSLTSKDPDIKAQYQQRWLAI-------DANARREVKNYVLQTLGTETYRPSSASQCVAG 114
Query: 185 AFVQRCPKEITPHIQSITELCLTYITYDPNYNYEDEEEGLGGEGGGEGMDTEEEDGEDEG 244
P P + +T + E E +G + ++ +
Sbjct: 115 IACAEIPVNQWPELIPQLVANVTNPNSTEHM-KESTLEAIGYICQDIDPEQLQDKSNEIL 173
Query: 245 EDDNEYSDDDDMSWKVRRAAAKCLEAIIATRRDLIGDMYRLVSPPLIARFKEREENVKSD 304
+ ++ S V+ AA L + + D + + +
Sbjct: 174 TAIIQGMRKEEPSNNVKLAATNALLNSLEFTKA-NFDKESERHFIMQVVCEATQCPDTRV 232
Query: 305 IFHAYMALLKGTRTFSPLTPSDPNQMDQEDSPLCLLSTQVPSLVKALQCQLREKSIRTRQ 364
A L+K + + + + + + + +
Sbjct: 233 RVAALQNLVKIMSLYYQYMETYMGPALFAIT-IEAMKSDIDEVALQGIEFWSNVCDEEMD 291
Query: 365 DCLALLRELVQTLPGCLAPSLPALIPDVTSVAEWDEEEGLGGEGGGEGMDTEEEDGEDEG 424
+ Q P A V + E + +
Sbjct: 292 LAIEASEAAEQGRPPEHTSKFYAKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCL 351
Query: 425 EDDNEYSDDD--------------DMSWKVRRAAAKCLEAII-ATRRDLIGDMYRLVSPP 469
+DD + W+ R AA I+ + + P
Sbjct: 352 MLLATCCEDDIVPHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLVIQAMPT 411
Query: 470 LIARFKEREENVKS 483
LI K+ V+
Sbjct: 412 LIELMKDPSVVVRD 425
>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId:
9606]}
Length = 529
Score = 37.6 bits (85), Expect = 0.015
Identities = 45/534 (8%), Positives = 120/534 (22%), Gaps = 32/534 (5%)
Query: 83 ALLPQLSSPRQAVRKRTIVALSHLVMSCN----LQLYTKLIDFLLEGLTTNKSTSTNRTY 138
L L+ Q V + V + L + +++ ++ + T R
Sbjct: 21 ELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCT 80
Query: 139 IQCFAAICRQAGHRFAEHIERVMPLILKYSREEDDELREFCLQACEAFVQRCPKEITPHI 198
+ A +P ++K D + + + +
Sbjct: 81 AGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVR 140
Query: 199 QSITELCLTYITYDPNYNYEDEEEGLGGEGGGEGMDTEEEDGEDEGEDDNEYSDDDDMSW 258
+ + + N + +++ G + ++
Sbjct: 141 LAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIIL-ASGGPQALVNIMRTYTY 199
Query: 259 KVRRAAAKCLEAIIATRRDLIGDMYRLVSPPLIARFKEREENVKSDIFHAYMALLKGTRT 318
+ + +++ + + +
Sbjct: 200 EKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTL-------- 251
Query: 319 FSPLTPSDPNQMDQEDSPLCLLSTQVPSLVKALQCQLREKSIRTRQDCLALLRELVQTLP 378
L+ + Q E L+ + + C S T + +
Sbjct: 252 -RNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGI 310
Query: 379 GCLAPSLPALIPDVTSVAEWDEEEGLGGEGGGEGMDTEEEDGEDEGEDDNEYSDDDDMSW 438
L ++ E + G W
Sbjct: 311 EALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPPSHW 370
Query: 439 KVRRAAAKCLEAIIATRRDLIGDMYRLVSPPLIARFKEREENVKSDIFHAYMALLKGTRT 498
+ +A + + + + P L+ ++ +
Sbjct: 371 PLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTQRRTSMG---------- 420
Query: 499 FSPLTPSDPNQMDQEDSPVCLLSTQVPSLVKALQCQLREKSIRTRQDCLALLRELMTSSD 558
Q E + + + L + + + + + L +L+ S
Sbjct: 421 -------GTQQQFVEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPI 473
Query: 559 KDFRFMATNDLMSELQKDSIKLDDDSERKVVKMLLRLLEDKNGEVQNLAVKCLG 612
++ + +A ++ EL +D + L LL +N V A L
Sbjct: 474 ENIQRVAAG-VLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLF 526
Score = 31.8 bits (70), Expect = 0.89
Identities = 12/67 (17%), Positives = 28/67 (41%), Gaps = 4/67 (5%)
Query: 1485 SIKLDDDSERKVVKMLLRLLEDKNGEVQNLAVKCLGPL----VNKVKEFQVETIVDALCS 1540
+ + D + + + L +LL D++ V N A + L ++ + +V A+
Sbjct: 7 NYQDDAELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVR 66
Query: 1541 NMVSDKE 1547
M + +
Sbjct: 67 TMQNTND 73
Score = 29.5 bits (64), Expect = 5.1
Identities = 8/36 (22%), Positives = 17/36 (47%)
Query: 577 SIKLDDDSERKVVKMLLRLLEDKNGEVQNLAVKCLG 612
+ + D + + + L +LL D++ V N A +
Sbjct: 7 NYQDDAELATRAIPELTKLLNDEDQVVVNKAAVMVH 42
>d1oyza_ a.118.1.16 (A:) Hypothetical protein YibA {Escherichia coli
[TaxId: 562]}
Length = 276
Score = 32.1 bits (71), Expect = 0.59
Identities = 28/288 (9%), Positives = 70/288 (24%), Gaps = 23/288 (7%)
Query: 1484 DSIKLDDDSERKVVKMLLRLLEDKNGEVQNLAVKCLGPLVNKVKEFQVETIVDALCSNMV 1543
L + ++ L RLL+D N + + + L + V
Sbjct: 8 KEYGLYNQCKKLNDDELFRLLDDHNSLKRISSARVLQ-------LRGGQDAVRLAIEFCS 60
Query: 1544 SDKEQLRDISSIGLKTVISVVYCLGDRNSSSNMKIDTLAFTHTLLTTHPPAVFHPHIHIL 1603
RDI + LG + + + + A
Sbjct: 61 DKNYIRRDIG----------AFILGQIKICKKCEDNVFNILNNMALNDKSACVRATAIES 110
Query: 1604 LPPVIIIKTLIREVEMGPF-KHTVDDGLDIRKAAFECMYTLLDTCLDRVDMFEFLNHLES 1662
+ + D ++R+A + +
Sbjct: 111 TAQRCKKNPIYSPKIVEQSQITAFDKSTNVRRATAFAIS---VINDKATIPLLINLLKDP 167
Query: 1663 GLRDHYDIKMLTYLMLARLAQMTPAALLQRLERIVEPLRNTVTLKVKANSVKQEYEKQDE 1722
+ + + + ++ E + + DE
Sbjct: 168 NGDVRNWAAFAININKYDNSDIRDCFVEMLQDKNEEVRIEAIIGLSYRKDKRVLSVLCDE 227
Query: 1723 LKRSAMR--AVAALLTIQDADKNPALNDFVATIKNSPELQTIFDSMQK 1768
LK++ + + A + D P L+ + ++ + + D +++
Sbjct: 228 LKKNTVYDDIIEAAGELGDKTLLPVLDTMLYKFDDNEIITSAIDKLKR 275
>d1lrva_ a.118.1.5 (A:) Leucine-rich repeat variant {Azotobacter
vinelandii [TaxId: 354]}
Length = 233
Score = 30.9 bits (69), Expect = 1.1
Identities = 29/192 (15%), Positives = 64/192 (33%), Gaps = 24/192 (12%)
Query: 434 DDMSWKVRRAAAKC--LEAIIATRRDLIGDM-----YRLVSPPLIARFKEREENVKSDIF 486
D W+ R A + +EA+ RD + YRL L A + + V+ +
Sbjct: 52 ADPFWERRAIAVRYSPVEALTPLIRDSDEVVRRAVAYRLPREQLSALMFDEDREVRITVA 111
Query: 487 HAYMALLKGTRTFSPLTP--SDPNQMDQEDSPVCLLSTQVPSLVKALQCQLREKSIRTRQ 544
L +D + + + + ++ ++ Q+R+ +
Sbjct: 112 DRLPL--------EQLEQMAADRDYLVRAYVVQRIPPGRLFRFMRDEDRQVRKLVAKRLP 163
Query: 545 DCLALLRELMTSSDKDFRFMATNDLMSELQKDSIKLDDDSERKVV-----KMLLRLLEDK 599
+ L + + + R + + L + + + D + R LR L++
Sbjct: 164 E--ESLGLMTQDPEPEVRRIVASRLRGDDLLELLHDPDWTVRLAAVEHASLEALRELDEP 221
Query: 600 NGEVQNLAVKCL 611
+ EV+ L
Sbjct: 222 DPEVRLAIAGRL 233
>d2afaa1 a.102.1.3 (A:4-415) Putative NAG isomerase YihS {Salmonella
typhimurium [TaxId: 90371]}
Length = 411
Score = 30.5 bits (68), Expect = 2.1
Identities = 22/156 (14%), Positives = 41/156 (26%), Gaps = 29/156 (18%)
Query: 368 ALLRELVQTLPGCLAPSLPALIPDVTSVAEWDEEEGLGGEGGGEGMDTEEEDGEDEGEDD 427
L+ L L L+ D + + +G + + + DG+
Sbjct: 253 RLMLHLHAALEARFETPPAWLLEDAKGLFHATIRDAWAPDGADGFVYSVDWDGKP----- 307
Query: 428 NEYSDDDDMSWKVRRAAAKCLEAIIATRRDLIGDMYRLVSPPLIARFKERE-----ENV- 481
+ + W + A T + Y+ I + E + +
Sbjct: 308 ---IVRERVRWPIVEAMGTAYALYTLTDDSQYEEWYQKWWDYCIKYLMDYENGSWWQELD 364
Query: 482 ------------KSDIFHAYMALLKGTRTFSPLTPS 505
K DI+H L+ PL P
Sbjct: 365 ADNKVTTKVWDGKQDIYHLLHCLV---IPRLPLAPG 397
>d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 457
Score = 30.2 bits (66), Expect = 2.4
Identities = 48/434 (11%), Positives = 106/434 (24%), Gaps = 44/434 (10%)
Query: 552 ELMTSSDKDFRFMATNDLMSELQKDSIKLDDDSERKVVKMLLRLLEDKNGEVQNLAVKCL 611
+ ++S D+ ++ + + +D + + L+ LL N VQ A L
Sbjct: 9 QYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGAL 68
Query: 612 GPLFKALTKIAASPLRIDLRPILTDGIPILGSFLRK-NQRALKLSTLLLLDTLLVNYPSA 670
+ L +GI S LR+ ++ LL L
Sbjct: 69 R-------NLVFRSTTNKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELK 121
Query: 671 ISTEMLNKVTVELAPLVSESDLHIAQLTLTLLTSIAKIQPNALVEPAAASILPQVLQIAK 730
+ ++ S ++ ++ NA
Sbjct: 122 EELIADALPVLADRVIIPFSGWCDGNSNMSREVVDPEVFFNAT----------------- 164
Query: 731 SPLLQGAALTSMLEFFKSLVLAELPGLSFSELLNMLIAPVMTGTALHKQAFHSLAKCVAA 790
L ++ L+ + V K + +
Sbjct: 165 ------GCLRNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNL 218
Query: 791 LAITVQREALPVVEKFLKELKTNKDDAHQVTIVALSHLVMSCNLQLTIVALSHLVMSCNL 850
+ + + S +M+ N +
Sbjct: 219 SYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGW 278
Query: 851 QLYTKLIDFLLEGLTTNKSTSTNRTYIQCFAAICRQAGH------RFAEHIERVMPLILK 904
++ I L + +K +T + G + E+ +P I +
Sbjct: 279 LYHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIAR 338
Query: 905 YSREEDDELREFCLQACEAFVQRCPKEITPHIQSIGRHTDLTSVADLKQVILNAFTPTSE 964
+ + ++ + Q T L + T SE
Sbjct: 339 LLQSGNSDVVRSGASLLSNMSRHPLLHRVMGNQVFPEVTRLLTSHTGN-------TSNSE 391
Query: 965 EVKSAASYTLGSIA 978
++ S+A YT+ ++
Sbjct: 392 DILSSACYTVRNLM 405
Score = 29.0 bits (63), Expect = 6.0
Identities = 15/73 (20%), Positives = 29/73 (39%)
Query: 1462 MTSSDKDFRFMATNDLMSELQKDSIKLDDDSERKVVKMLLRLLEDKNGEVQNLAVKCLGP 1521
++S D+ ++ + + +D + + L+ LL N VQ A L
Sbjct: 11 LSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRN 70
Query: 1522 LVNKVKEFQVETI 1534
LV + ++ET
Sbjct: 71 LVFRSTTNKLETR 83
>d1aopa4 d.134.1.1 (A:426-570) Sulfite reductase hemoprotein
(SiRHP), domains 2 and 4 {Escherichia coli [TaxId: 562]}
Length = 145
Score = 28.4 bits (63), Expect = 4.6
Identities = 21/128 (16%), Positives = 48/128 (37%), Gaps = 13/128 (10%)
Query: 782 HSLAKCVAA----LAITVQREALPVVEKFLKELKTNKDDAHQVTIVALSHLVMSCNLQ-- 835
+S+A CV+ LA+ LP + L + + ++ ++ C
Sbjct: 5 NSMA-CVSFPTCPLAMAEAERFLPSFIDNIDNLMAKHGVSDEHIVMRVTGCPNGCGRAML 63
Query: 836 --LTIVALS---HLVMSCNLQLYTKLIDFLLEGLTTNKSTSTNRTYIQCFAAICRQAGHR 890
+ +V + + + ++ T++ E +T + ++ I +A R+AG
Sbjct: 64 AEVGLVGKAPGRYNLHLGGNRIGTRIPRMYKENITEPEILASLDELIGRWAK-EREAGEG 122
Query: 891 FAEHIERV 898
F + R
Sbjct: 123 FGDFTVRA 130
>d2frha1 a.4.5.28 (A:102-216) Pleiotropic regulator of virulence
genes, SarA {Staphylococcus aureus [TaxId: 1280]}
Length = 115
Score = 27.3 bits (60), Expect = 7.1
Identities = 6/49 (12%), Positives = 22/49 (44%)
Query: 1644 LDTCLDRVDMFEFLNHLESGLRDHYDIKMLTYLMLARLAQMTPAALLQR 1692
++ C + + M + + L+S ++ + I + +L +++ +
Sbjct: 5 INDCFELLSMVTYADKLKSLIKKEFSISFEEFAVLTYISENKEKEYYLK 53
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId:
10090]}
Length = 434
Score = 28.6 bits (62), Expect = 7.9
Identities = 35/389 (8%), Positives = 96/389 (24%), Gaps = 28/389 (7%)
Query: 1148 DQEVKERAISCMGQIICNLGDYLKSELPVC--LPILLDRLR---NEITRLTTVKALTKIA 1202
+ E + +A +++ + +P + L + + ALT IA
Sbjct: 26 NLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIA 85
Query: 1203 ASPLRIDLRPILTDGIPILGSFLRKNQRALKLSTLLLLDTLLVNYPSAISTEMLNKVTVE 1262
+ + IP S L + + L + + + + +
Sbjct: 86 SGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFRDLVIKH----- 140
Query: 1263 LAPLVSESDLHIAQLTLTLLTSIAKIQPNALVEPAAASILPQIGRHTDLTSVADLKQVIL 1322
L LL L + R+ + D + IL
Sbjct: 141 ----------GAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQIL 190
Query: 1323 NAFTPTSEEVKSAASYTLGSIAVGNLQQYVPFVLKEIENQPKRQYLLLHSLKEIISWQST 1382
+ ++ Q + L +
Sbjct: 191 PTLVRLLHHNDPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLL-------GATE 243
Query: 1383 STSGVAQLQQFVPAIWAQLFLHCECQEEGTRNVVAECLGKLTLIDPSNLLPRLQESLKSN 1442
L+ + + + G V L +
Sbjct: 244 LPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGR 303
Query: 1443 SALMRTTVLTAVKFTISDQMTSSDKDFRFMATNDLMSELQKDSIK-LDDDSERKVVKMLL 1501
++ V + + ++ +D + A + + +++ + +++ L+
Sbjct: 304 QDQIQQVVNHGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGIIEPLM 363
Query: 1502 RLLEDKNGEVQNLAVKCLGPLVNKVKEFQ 1530
LL K+ ++ + + + + ++
Sbjct: 364 NLLSAKDTKIIQVILDAISNIFQAAEKLG 392
>d1lsha1 a.118.4.1 (A:285-620) Lipovitellin-phosvitin complex,
superhelical domain {Lamprey (Ichthyomyzon unicuspis)
[TaxId: 30308]}
Length = 336
Score = 28.3 bits (63), Expect = 8.9
Identities = 31/229 (13%), Positives = 72/229 (31%), Gaps = 39/229 (17%)
Query: 790 ALAITVQREALPVVEKFLKELKTNKDDAHQVTIVALSHL--------------------- 828
A+ EAL +++ L + +A Q+ LS+
Sbjct: 80 AVPAMATSEALLFLKRTLASEQLTSAEATQIVASTLSNQQATRESLSYARELLNTSFIRN 139
Query: 829 --VMSCNLQLTIVALSHLVMSCNLQLYTKLIDFLLEGLTTNKSTSTNRTYIQCFAAICRQ 886
++ L +L + + +L+ L + L+ + + + A+
Sbjct: 140 RPILRKTAVLGYGSLVFRYCANTVSCPDELLQPLHDLLSQSSDRAKEEEIVLALKALGNA 199
Query: 887 AGHRFAEHIERVMPLILKYSREEDDELREFCLQACEAFVQRCPKEITPHIQSIGRHTDLT 946
+ I+R +P K E ++ + A +R P+++ + I + +
Sbjct: 200 GQPNSIKKIQRFLPGQGKSLDEYSTRVQAEAIMALRNIAKRDPRKVQEIVLPIFLNVAIK 259
Query: 947 ----------------SVADLKQVILNAFTPTSEEVKSAASYTLGSIAE 979
SVA + V + + +V S + S++
Sbjct: 260 SELRIRSCIVFFESKPSVALVSMVAVRLRREPNLQVASFVYSQMRSLSR 308
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.133 0.376
Gapped
Lambda K H
0.267 0.0500 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 6,289,574
Number of extensions: 296107
Number of successful extensions: 857
Number of sequences better than 10.0: 1
Number of HSP's gapped: 793
Number of HSP's successfully gapped: 67
Length of query: 1827
Length of database: 2,407,596
Length adjustment: 98
Effective length of query: 1729
Effective length of database: 1,062,056
Effective search space: 1836294824
Effective search space used: 1836294824
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 60 (27.4 bits)