BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14677
(483 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8BIZ6|SNIP1_MOUSE Smad nuclear-interacting protein 1 OS=Mus musculus GN=Snip1 PE=1
SV=1
Length = 383
Score = 262 bits (670), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 140/265 (52%), Positives = 178/265 (67%), Gaps = 15/265 (5%)
Query: 213 EPSERETKRNRQSHDDEETNERRHHDRNNRTHDNRHDERNSRQQNNERGSQDRRSNQSHD 272
EPSE+E +R R S E + R H R R+ D ER Q+ +R SQ+ ++ +
Sbjct: 118 EPSEQEHRRARNS----ERDRHRGHSRQGRSSD----ERPVSGQDRDRDSQNLQAQEEER 169
Query: 273 RPQSSSNSHHRDRGPKKPFCDASDEYEWGRKDANNEDNKNNAQQPKQKPDFGLSGKLTED 332
++ HR + S+ E + A N + K+KP F LSG L ED
Sbjct: 170 DFHNARRREHRQQNE----SAGSEAQEVIPRPAGNRSKEVPV---KEKPSFELSGALLED 222
Query: 333 TNTYNGVVIKYSEPPDARKPKRRWRLYPFKGDTQLPVLHIHRQSAFLMGRDRKVADIPVD 392
TNT+ GVVIKYSEPP+AR PK+RWRLYPFK D LPV++IHRQSA+L+GR R++ADIP+D
Sbjct: 223 TNTFRGVVIKYSEPPEARIPKKRWRLYPFKNDEVLPVMYIHRQSAYLLGRHRRIADIPID 282
Query: 393 HPSCSKQHAALQYRLTDYTREDGSKGKRIRLYIIDLESANGTFVNNKKIDPKRYVELLEK 452
HPSCSKQHA QYRL +YTR DG+ G+R++ YIIDL S NGTF+NNK+I+P+RY EL EK
Sbjct: 283 HPSCSKQHAVFQYRLVEYTRADGTVGRRVKPYIIDLGSGNGTFLNNKRIEPQRYYELKEK 342
Query: 453 DVIKFGFSSREYVLLHEHSKDSDYD 477
DV+KFGFSSREYVLLHE S S+ D
Sbjct: 343 DVLKFGFSSREYVLLHESSDTSELD 367
>sp|Q5M9G6|SNIP1_RAT Smad nuclear interacting protein 1 OS=Rattus norvegicus GN=Snip1
PE=2 SV=1
Length = 389
Score = 261 bits (666), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 117/168 (69%), Positives = 139/168 (82%)
Query: 310 NKNNAQQPKQKPDFGLSGKLTEDTNTYNGVVIKYSEPPDARKPKRRWRLYPFKGDTQLPV 369
NKN K+KP F LSG L EDTNT+ GVVIKYSEPP+AR PK+RWRLYPFK D LPV
Sbjct: 204 NKNKEVPVKEKPSFELSGALLEDTNTFRGVVIKYSEPPEARIPKKRWRLYPFKNDEVLPV 263
Query: 370 LHIHRQSAFLMGRDRKVADIPVDHPSCSKQHAALQYRLTDYTREDGSKGKRIRLYIIDLE 429
++IHRQSA+L+GR R++ADIP+DHPSCSKQHA QYRL +YTR DG+ G+R++ YIIDL
Sbjct: 264 MYIHRQSAYLLGRHRRIADIPIDHPSCSKQHAVFQYRLVEYTRADGTVGRRVKPYIIDLG 323
Query: 430 SANGTFVNNKKIDPKRYVELLEKDVIKFGFSSREYVLLHEHSKDSDYD 477
S NGTF+NNK+I+P+RY EL EKDV+KFGFSSREYVLLHE S S+ D
Sbjct: 324 SGNGTFLNNKRIEPQRYYELKEKDVLKFGFSSREYVLLHESSDTSELD 371
>sp|Q8TAD8|SNIP1_HUMAN Smad nuclear-interacting protein 1 OS=Homo sapiens GN=SNIP1 PE=1
SV=1
Length = 396
Score = 261 bits (666), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 140/265 (52%), Positives = 178/265 (67%), Gaps = 10/265 (3%)
Query: 213 EPSERETKRNRQSHDDEETNERRHHDRNNRTHDNRHDERNSRQQNNERGSQDRRSNQSHD 272
EPSE+E +R R S D R H RT + R + + Q +R +Q+ ++ +
Sbjct: 126 EPSEQEHRRARNSDRDRH----RGHSHQRRTSNERPG--SGQGQGRDRDTQNLQAQEEER 179
Query: 273 RPQSSSNSHHRDRGPKKPFCDASDEYEWGRKDANNEDNKNNAQQPKQKPDFGLSGKLTED 332
++ HR R S E R NN++ + A K+KP F LSG L ED
Sbjct: 180 EFYNARRREHRQRNDVGGGGSESQEL-VPRPGGNNKEKEVPA---KEKPSFELSGALLED 235
Query: 333 TNTYNGVVIKYSEPPDARKPKRRWRLYPFKGDTQLPVLHIHRQSAFLMGRDRKVADIPVD 392
TNT+ GVVIKYSEPP+AR PK+RWRLYPFK D LPV++IHRQSA+L+GR R++ADIP+D
Sbjct: 236 TNTFRGVVIKYSEPPEARIPKKRWRLYPFKNDEVLPVMYIHRQSAYLLGRHRRIADIPID 295
Query: 393 HPSCSKQHAALQYRLTDYTREDGSKGKRIRLYIIDLESANGTFVNNKKIDPKRYVELLEK 452
HPSCSKQHA QYRL +YTR DG+ G+R++ YIIDL S NGTF+NNK+I+P+RY EL EK
Sbjct: 296 HPSCSKQHAVFQYRLVEYTRADGTVGRRVKPYIIDLGSGNGTFLNNKRIEPQRYYELKEK 355
Query: 453 DVIKFGFSSREYVLLHEHSKDSDYD 477
DV+KFGFSSREYVLLHE S S+ D
Sbjct: 356 DVLKFGFSSREYVLLHESSDTSEID 380
>sp|Q8W4D8|DDL_ARATH FHA domain-containing protein DDL OS=Arabidopsis thaliana GN=DDL
PE=1 SV=1
Length = 314
Score = 199 bits (505), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 91/161 (56%), Positives = 119/161 (73%), Gaps = 1/161 (0%)
Query: 314 AQQPKQKPDFGLSGKLTEDTNTYNGVVIKYSEPPDARKPKRRWRLYPFK-GDTQLPVLHI 372
A + K++P F LSGKL E+TN Y G+ + ++EPP+ARKP RWRLY FK G+ L +
Sbjct: 154 AAKKKEEPSFELSGKLAEETNRYRGITLLFNEPPEARKPSERWRLYVFKDGEPLNEPLCL 213
Query: 373 HRQSAFLMGRDRKVADIPVDHPSCSKQHAALQYRLTDYTREDGSKGKRIRLYIIDLESAN 432
HRQS +L GR+R++ADIP DHPSCSKQHA +QYR + + DG GK+++ YI+DL S N
Sbjct: 214 HRQSCYLFGRERRIADIPTDHPSCSKQHAVIQYREMEKEKPDGMMGKQVKPYIMDLGSTN 273
Query: 433 GTFVNNKKIDPKRYVELLEKDVIKFGFSSREYVLLHEHSKD 473
T++N I+P+RY EL EKD IKFG SSREYVLLHE+S +
Sbjct: 274 KTYINESPIEPQRYYELFEKDTIKFGNSSREYVLLHENSAE 314
>sp|Q54VU4|Y8013_DICDI Probable serine/threonine-protein kinase DDB_G0280133
OS=Dictyostelium discoideum GN=DDB_G0280133 PE=3 SV=1
Length = 1505
Score = 151 bits (382), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/305 (33%), Positives = 164/305 (53%), Gaps = 36/305 (11%)
Query: 197 HEKPH-------SSDKHRHSSKTEPSERETKRNRQSHDDEETNERRHHDRNNRTHDNRHD 249
+ +PH D + K+E + KR+ QS+DD +E R +T +
Sbjct: 1191 NFQPHLRRIKMSKRDNSYNKRKSEDGDSYKKRDNQSYDDILKDEGNKRLRELQT----YS 1246
Query: 250 ERNSRQQNNERGSQDRRSNQSHDRPQSSSNSHHRDRGPKKPFC--DASDEYEWGR----K 303
E + +Q+ R S D + + + ++N+++ + ++ + ++ +++G+ K
Sbjct: 1247 EGDKSRQHYNRDSNDNSRDNNRYNNRDNNNNNNSNNNRERDRYKKNKNENFDYGKYKFGK 1306
Query: 304 DANNEDNKNNAQQPKQKPDFGLSGKLTEDTNTYNGVV------------------IKYSE 345
+E+NK+ ++KPDF SG L D+++ G + +K+ E
Sbjct: 1307 SNEDEENKDKPNIVREKPDFKPSGSLKNDSSSNYGTISSGRNNNNGEEDEENKIKLKWHE 1366
Query: 346 PPDARKPKRRWRLYPFKGDTQLPVLHIHRQSAFLMGRDRKVADIPVDHPSCSKQHAALQY 405
P +A+ P +W LYPFKG QL +++HR+ +FL GR+R +ADIP+DHPSCS QHA + +
Sbjct: 1367 PAEAKLPTEKWMLYPFKGKDQLDTIYLHRKKSFLFGRNRDIADIPIDHPSCSSQHAVIVF 1426
Query: 406 RLTDYTRED-GSKGKRIRLYIIDLESANGTFVNNKKIDPKRYVELLEKDVIKFGFSSREY 464
R+ + GS I YIIDLES NGTF+ +KI+P +Y EL KD I FG S+REY
Sbjct: 1427 RIRKKENPNTGSIKTFILPYIIDLESTNGTFLKGEKIEPAKYFELRPKDKITFGTSTREY 1486
Query: 465 VLLHE 469
+LL E
Sbjct: 1487 ILLCE 1491
>sp|Q9BWU0|NADAP_HUMAN Kanadaptin OS=Homo sapiens GN=SLC4A1AP PE=1 SV=1
Length = 796
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 62/124 (50%), Gaps = 3/124 (2%)
Query: 343 YSEPPDARKPKRRWRLYPFKGDTQLPVLHIHRQSAFLMGRDRKVADIPVDHPSCSKQHAA 402
Y EPP + L KG T L + S L GR D+ ++HPS S+ HA
Sbjct: 154 YQEPPWGGPATAPYSLETLKGGTILGTRSLKGTSYCLFGR-LSGCDVCLEHPSVSRYHAV 212
Query: 403 LQYRLTDYTREDGSKGKRIRLYIIDLESANGTFVNNKKIDPKRYVELLEKDVIKFGFSSR 462
LQ+R + E S G LY DL S +GTF+N +I P+ Y + V++FG S+R
Sbjct: 213 LQHRASGPDGECDSNGPGFYLY--DLGSTHGTFLNKTRIPPRTYCRVHVGHVVRFGGSTR 270
Query: 463 EYVL 466
++L
Sbjct: 271 LFIL 274
>sp|Q07930|PML1_YEAST Pre-mRNA leakage protein 1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PML1 PE=1 SV=1
Length = 204
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 90/201 (44%), Gaps = 50/201 (24%)
Query: 308 EDNKNNAQQPKQKPDFGLSGKLTEDTNTYNGVVIKYSEPPDARKPKRRWRLYPFKG-DTQ 366
+D K +Q PDF SG L ++N G+ +K+ EP DA P + + D
Sbjct: 17 DDKKFKSQYIDIMPDFSPSGLLELESNNKEGIALKHVEPQDAISPDNYMDMLGLEARDRT 76
Query: 367 LPVLHIHRQ----------------SAFLMGR-----------DRK---VADIPVDHPSC 396
+ L I+R+ S +L+GR DR VADI + +
Sbjct: 77 MYELVIYRKNDKDKGPWKRYDLNGRSCYLVGRELGHSLDTDLDDRTEIVVADIGIPEETS 136
Query: 397 SKQHAALQYRLTDYTREDGSKGKRIRLYIIDLESANGTFVNNKKIDPKRYVELLEKDVIK 456
SKQH +Q+R +G ++ Y++DL+S+NGT +NN I RY+EL DV+
Sbjct: 137 SKQHCVIQFR--------NVRGI-LKCYVMDLDSSNGTCLNNVVIPGARYIELRSGDVLT 187
Query: 457 FGFSSREYVLLHEHSKDSDYD 477
L E +D+DY+
Sbjct: 188 ----------LSEFEEDNDYE 198
>sp|Q8R3G1|PP1R8_MOUSE Nuclear inhibitor of protein phosphatase 1 OS=Mus musculus
GN=Ppp1r8 PE=1 SV=1
Length = 351
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 62/122 (50%), Gaps = 13/122 (10%)
Query: 346 PPDARKPKRRWRLYPFKGDTQLPVLHIHRQSAFLMGRDRKVADIPVDHPSCSKQHAALQY 405
P A KP L KGD + L I + +L GR+ + D +DH SCS+ HAAL Y
Sbjct: 17 PTWAGKPPPGLHLDVVKGDKLIEKLIIDEKKYYLFGRNPDLCDFTIDHQSCSRVHAALVY 76
Query: 406 RLTDYTREDGSKGKRI-RLYIIDLESANGTFVNNKKIDPKRYVELLEKDVIKFGFSSREY 464
K + R+++IDL S +GTF+ + +++P + ++ + FG S+R Y
Sbjct: 77 H------------KHLKRVFLIDLNSTHGTFLGHIRLEPHKPQQIPIDSTVSFGASTRAY 124
Query: 465 VL 466
L
Sbjct: 125 TL 126
>sp|Q12972|PP1R8_HUMAN Nuclear inhibitor of protein phosphatase 1 OS=Homo sapiens
GN=PPP1R8 PE=1 SV=2
Length = 351
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 62/122 (50%), Gaps = 13/122 (10%)
Query: 346 PPDARKPKRRWRLYPFKGDTQLPVLHIHRQSAFLMGRDRKVADIPVDHPSCSKQHAALQY 405
P A KP L KGD + L I + +L GR+ + D +DH SCS+ HAAL Y
Sbjct: 17 PTWAGKPPPGLHLDVVKGDKLIEKLIIDEKKYYLFGRNPDLCDFTIDHQSCSRVHAALVY 76
Query: 406 RLTDYTREDGSKGKRI-RLYIIDLESANGTFVNNKKIDPKRYVELLEKDVIKFGFSSREY 464
K + R+++IDL S +GTF+ + +++P + ++ + FG S+R Y
Sbjct: 77 H------------KHLKRVFLIDLNSTHGTFLGHIRLEPHKPQQIPIDSTVSFGASTRAY 124
Query: 465 VL 466
L
Sbjct: 125 TL 126
>sp|Q28147|PP1R8_BOVIN Nuclear inhibitor of protein phosphatase 1 OS=Bos taurus GN=PPP1R8
PE=1 SV=1
Length = 351
Score = 63.2 bits (152), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 62/122 (50%), Gaps = 13/122 (10%)
Query: 346 PPDARKPKRRWRLYPFKGDTQLPVLHIHRQSAFLMGRDRKVADIPVDHPSCSKQHAALQY 405
P A KP L KGD + L I + +L GR+ + D +DH SCS+ HAAL Y
Sbjct: 17 PTWAGKPPPGLHLDVVKGDKLIEKLIIDEKKYYLFGRNPDLCDFTIDHQSCSRVHAALVY 76
Query: 406 RLTDYTREDGSKGKRI-RLYIIDLESANGTFVNNKKIDPKRYVELLEKDVIKFGFSSREY 464
K + R+++IDL S +GTF+ + +++P + ++ + FG S+R Y
Sbjct: 77 H------------KHLKRVFLIDLNSTHGTFLGHIRLEPHKPQQIPIDSTVSFGASTRAY 124
Query: 465 VL 466
L
Sbjct: 125 TL 126
>sp|Q9Y4F5|C170B_HUMAN Centrosomal protein of 170 kDa protein B OS=Homo sapiens GN=CEP170B
PE=1 SV=4
Length = 1589
Score = 52.8 bits (125), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 21/98 (21%)
Query: 369 VLHIHRQSAFLMGRDRKVADIPVDHPSCSKQHAALQYRLTDYTREDGSKGKRIRLYIIDL 428
++ + R+ LM + R V KQHA + Y D R++ ++ DL
Sbjct: 22 LIFVGREECELMLQSRSV----------DKQHAVINY---DQDRDE--------HWVKDL 60
Query: 429 ESANGTFVNNKKIDPKRYVELLEKDVIKFGFSSREYVL 466
S NGTFVN+ +I ++YV L DVI+FG+ S YVL
Sbjct: 61 GSLNGTFVNDMRIPDQKYVTLKLNDVIRFGYDSNMYVL 98
>sp|Q80U49|C170B_MOUSE Centrosomal protein of 170 kDa protein B OS=Mus musculus GN=Cep170b
PE=1 SV=2
Length = 1574
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 13/89 (14%)
Query: 378 FLMGRDRKVADIPVDHPSCSKQHAALQYRLTDYTREDGSKGKRIRLYIIDLESANGTFVN 437
+GRD ++ + S KQHA + Y D R++ ++ DL S NGTFVN
Sbjct: 23 IFVGRDE--CELMLQSRSVDKQHAVINY---DQDRDE--------HWVKDLGSLNGTFVN 69
Query: 438 NKKIDPKRYVELLEKDVIKFGFSSREYVL 466
+ +I ++Y+ L DVI+FG+ S YVL
Sbjct: 70 DVRIPDQKYITLKLNDVIRFGYDSNMYVL 98
>sp|Q9VJ87|CWC22_DROME Pre-mRNA-splicing factor CWC22 homolog OS=Drosophila melanogaster
GN=ncm PE=1 SV=3
Length = 1330
Score = 34.3 bits (77), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 10/114 (8%)
Query: 172 HRHHHKQERTELSDRHNLQENQRPRHEKPHSSDKHRHSSKTEPSERETKRNRQSHDDEET 231
H K++R+ +R ++EN PR ++ SS SE++++R +S +E +
Sbjct: 1194 HDRQRKRDRSRSYERPTIRENSAPREKRMESSR----------SEKDSRRGDRSSRNERS 1243
Query: 232 NERRHHDRNNRTHDNRHDERNSRQQNNERGSQDRRSNQSHDRPQSSSNSHHRDR 285
+ DR R+ +R R ER + RS++ +R ++ RDR
Sbjct: 1244 DRGERSDRGERSDRGERSDRGERSDRGERSDRGERSDREKERSRAKERERDRDR 1297
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.131 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 191,325,685
Number of Sequences: 539616
Number of extensions: 8708763
Number of successful extensions: 102424
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1413
Number of HSP's successfully gapped in prelim test: 1508
Number of HSP's that attempted gapping in prelim test: 47725
Number of HSP's gapped (non-prelim): 24077
length of query: 483
length of database: 191,569,459
effective HSP length: 121
effective length of query: 362
effective length of database: 126,275,923
effective search space: 45711884126
effective search space used: 45711884126
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)