Query psy14677
Match_columns 483
No_of_seqs 321 out of 1662
Neff 3.6
Searched_HMMs 13730
Date Fri Aug 16 17:50:53 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14677.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/14677hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1uhta_ b.26.1.2 (A:) FHA doma 99.9 8.9E-23 6.5E-27 174.5 11.8 107 350-469 7-113 (118)
2 d1mzka_ b.26.1.2 (A:) Kinase a 99.8 1.4E-20 1E-24 161.2 13.2 101 357-469 7-119 (122)
3 d2ff4a3 b.26.1.2 (A:284-382) P 99.8 1.5E-19 1.1E-23 149.8 10.7 83 366-465 14-96 (99)
4 d1gxca_ b.26.1.2 (A:) Chk2 kin 99.8 5.7E-19 4.1E-23 149.6 13.9 102 357-471 4-114 (116)
5 d2piea1 b.26.1.2 (A:13-139) Ub 99.8 1.7E-18 1.3E-22 150.5 13.2 101 354-469 4-115 (127)
6 d2affa1 b.26.1.2 (A:3-100) Ant 99.7 7.1E-18 5.2E-22 138.4 12.2 90 358-464 6-95 (98)
7 d1lgpa_ b.26.1.2 (A:) Cell cyc 99.7 1.2E-18 8.8E-23 147.0 7.3 92 355-460 3-96 (113)
8 d1dmza_ b.26.1.2 (A:) Phosphot 99.7 2.4E-17 1.8E-21 147.2 14.2 101 357-459 7-110 (158)
9 d1g6ga_ b.26.1.2 (A:) Phosphot 99.7 1.4E-17 1E-21 143.5 10.7 81 374-468 34-119 (127)
10 d2brfa1 b.26.1.2 (A:8-108) Pol 99.7 3.9E-17 2.8E-21 136.3 12.3 98 357-469 2-100 (101)
11 d2g1la1 b.26.1.2 (A:498-599) K 99.6 1.2E-15 8.9E-20 125.9 12.9 96 357-466 3-100 (102)
12 d1wlna1 b.26.1.2 (A:8-114) Afa 99.6 7E-15 5.1E-19 123.1 11.1 82 369-467 23-105 (107)
13 d1dm9a_ d.66.1.3 (A:) Heat sho 69.8 2.4 0.00018 34.1 4.6 33 432-466 30-62 (104)
14 d1vioa2 d.66.1.5 (A:0-57) Pseu 40.7 5 0.00037 28.5 1.5 32 432-464 26-57 (58)
15 d1h3fa2 d.66.1.4 (A:352-432) T 39.9 23 0.0016 26.5 5.3 31 431-461 42-73 (81)
16 d1p9ka_ d.66.1.6 (A:) Hypothet 30.6 13 0.00096 28.0 2.5 33 432-465 46-78 (79)
17 d1c06a_ d.66.1.2 (A:) Ribosoma 25.8 20 0.0014 30.6 3.1 28 432-460 76-103 (159)
18 d1vjka_ d.15.3.1 (A:) Molybdop 24.8 18 0.0013 26.6 2.3 24 434-459 62-85 (88)
19 d1jh3a_ d.66.1.4 (A:) Tyrosyl- 21.4 47 0.0034 25.4 4.3 30 430-460 55-91 (99)
No 1
>d1uhta_ b.26.1.2 (A:) FHA domain containing protein At4G14490 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=99.88 E-value=8.9e-23 Score=174.45 Aligned_cols=107 Identities=28% Similarity=0.343 Sum_probs=93.2
Q ss_pred CCCCCceEEEEeeCCCcccEEEecccceeeeccCCCccceeeCCCCcCccceEEEEeecccccCCCCCCceeEEEEEeCC
Q psy14677 350 RKPKRRWRLYPFKGDTQLPVLHIHRQSAFLMGRDRKVADIPVDHPSCSKQHAALQYRLTDYTREDGSKGKRIRLYIIDLE 429 (483)
Q Consensus 350 r~P~~~WrL~VfKGge~~eti~L~~qs~ylIGRd~~~cDIvLdDPSISRqHAvIq~r~~~~~~edG~~~~~vr~yIiDLG 429 (483)
...+..++|.+..|+..+..+.|.....++|||+...|||+|++++|||.||.|.+.. + .|+|+||+
T Consensus 7 g~~~p~l~L~v~~Gp~~g~~~~l~~~~~~~iGR~~~~~di~l~d~~VSr~Ha~i~~~~-------~------~~~i~Dl~ 73 (118)
T d1uhta_ 7 GMVTPSLRLVFVKGPREGDALDYKPGSTIRVGRIVRGNEIAIKDAGISTKHLRIESDS-------G------NWVIQDLG 73 (118)
T ss_dssp CCCSCEEEEEESSSTTTTCBCCBCTTCCEEEESSSTTCSEECCSSSSCTTCEEEEECS-------S------SEEEECCC
T ss_pred CCCCCcEEEEEEeCCCCCcEEEeCCCCEEEECCCCcCCeEEeCccCcchheeEEEEEC-------C------EEEEEECC
Confidence 3344568899999988888899987778999998546999999999999999998863 2 59999999
Q ss_pred CCCceEecCEEcCCCceEEcCCCCEEEEcCcceEEEEeec
Q psy14677 430 SANGTFVNNKKIDPKRYVELLEKDVIKFGFSSREYVLLHE 469 (483)
Q Consensus 430 STNGTFVNGeRI~p~r~veLkdGDvIrFG~STReYVLl~e 469 (483)
|+|||||||++|.+..+++|.+||+|+||.+++.|+.+.+
T Consensus 74 S~nGT~vng~~l~~~~~~~L~~Gd~i~lG~~~~~~v~~~~ 113 (118)
T d1uhta_ 74 SSNGTLLNSNALDPETSVNLGDGDVIKLGEYTSILVNFVS 113 (118)
T ss_dssp CSSCCEESSSBCCTTCEEECCTTEEEEETTTEEEEEEEEC
T ss_pred CcceeEECCEEcCCCcEEECCCCCEEEECCEEEEEEEecC
Confidence 9999999999999988999999999999999888876554
No 2
>d1mzka_ b.26.1.2 (A:) Kinase associated protein phosphatase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=99.83 E-value=1.4e-20 Score=161.17 Aligned_cols=101 Identities=26% Similarity=0.367 Sum_probs=85.3
Q ss_pred EEEEeeCCCcccEEEecccc----eeeeccCCCccceeeCCCCcCccceEEEEeecccccCCCCCCceeEEEEEeCCCCC
Q psy14677 357 RLYPFKGDTQLPVLHIHRQS----AFLMGRDRKVADIPVDHPSCSKQHAALQYRLTDYTREDGSKGKRIRLYIIDLESAN 432 (483)
Q Consensus 357 rL~VfKGge~~eti~L~~qs----~ylIGRd~~~cDIvLdDPSISRqHAvIq~r~~~~~~edG~~~~~vr~yIiDLGSTN 432 (483)
.|.++.|+..+..+.+.... .++|||++ .|||+|++|.||+.||.|.+... +| .|||.||+|+|
T Consensus 7 ~L~vi~Gp~~g~~~~l~~~~~~~~~~~IGR~~-~~di~l~d~~vSr~Ha~i~~~~~-----~~------~~~v~DlgS~n 74 (122)
T d1mzka_ 7 FLEVIAGPAIGLQHAVNSTSSSKLPVKLGRVS-PSDLALKDSEVSGKHAQITWNST-----KF------KWELVDMGSLN 74 (122)
T ss_dssp EEEECSSTTCSCEEEECTTCSTTCSEEEESSS-SCSEECCCTTSSSEEEEEEEETT-----TT------EEEEEETTCSS
T ss_pred EEEEEECCCCCcEEEecCCCCCcCCEEecCCC-CCCEEECCCCcCccceEEEEeCC-----CC------EEEEeeCCCCC
Confidence 67777888777888886443 48999998 69999999999999999998632 23 79999999999
Q ss_pred ceEecCEEcCC--------CceEEcCCCCEEEEcCcceEEEEeec
Q psy14677 433 GTFVNNKKIDP--------KRYVELLEKDVIKFGFSSREYVLLHE 469 (483)
Q Consensus 433 GTFVNGeRI~p--------~r~veLkdGDvIrFG~STReYVLl~e 469 (483)
||||||.+|.. +.+++|.+||+|+||.+++.|+-...
T Consensus 75 GT~vNg~~i~~~~~~~~~~g~~~~L~~gd~i~iG~~~~~~v~~~~ 119 (122)
T d1mzka_ 75 GTLVNSHSISHPDLGSRKWGNPVELASDDIITLGTTTKVYVRISS 119 (122)
T ss_dssp CCEETTEESSCCCTTTCCCCCCEECCTTEEEECSSSCEEEEEEEE
T ss_pred ceEECCEECcccccccccCCceEEcCCCCEEEECCeEEEEEEEec
Confidence 99999999953 56789999999999999988886554
No 3
>d2ff4a3 b.26.1.2 (A:284-382) Probable regulatory protein EmbR, C-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=99.79 E-value=1.5e-19 Score=149.84 Aligned_cols=83 Identities=25% Similarity=0.268 Sum_probs=71.0
Q ss_pred cccEEEecccceeeeccCCCccceeeCCCCcCccceEEEEeecccccCCCCCCceeEEEEEeCCCCCceEecCEEcCCCc
Q psy14677 366 QLPVLHIHRQSAFLMGRDRKVADIPVDHPSCSKQHAALQYRLTDYTREDGSKGKRIRLYIIDLESANGTFVNNKKIDPKR 445 (483)
Q Consensus 366 ~~eti~L~~qs~ylIGRd~~~cDIvLdDPSISRqHAvIq~r~~~~~~edG~~~~~vr~yIiDLGSTNGTFVNGeRI~p~r 445 (483)
.+..+.|.. ..++|||++ .|||+|++|.||+.||.|.+.. + .|+|.||+|+|||||||++|..
T Consensus 14 ~G~~~~l~~-~~~~IGR~~-~~di~l~d~~VSr~Ha~i~~~~-------~------~~~i~Dl~S~nGt~vNg~~i~~-- 76 (99)
T d2ff4a3 14 SGRGYPLQA-AATRIGRLH-DNDIVLDSANVSRHHAVIVDTG-------T------NYVINDLRSSNGVHVQHERIRS-- 76 (99)
T ss_dssp TCCEEECCS-SEEEEESST-TSSEECCCTTSCTTCEEEEECS-------S------CEEEEECSCSSCCEETTEECSS--
T ss_pred CCCEEEECC-CCEEEeeCc-CCCEEECCccccceeEEEEEeC-------C------EEEEEECCCcCCCeECCEEcCC--
Confidence 345788865 578999998 6999999999999999998752 2 5999999999999999999964
Q ss_pred eEEcCCCCEEEEcCcceEEE
Q psy14677 446 YVELLEKDVIKFGFSSREYV 465 (483)
Q Consensus 446 ~veLkdGDvIrFG~STReYV 465 (483)
+++|.+||+|+||...+.|.
T Consensus 77 ~~~L~~Gd~i~iG~~~~~f~ 96 (99)
T d2ff4a3 77 AVTLNDGDHIRICDHEFTFQ 96 (99)
T ss_dssp EEEECTTCEEEETTEEEEEE
T ss_pred ceECCCCCEEEECCEEEEEE
Confidence 57899999999998765554
No 4
>d1gxca_ b.26.1.2 (A:) Chk2 kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.79 E-value=5.7e-19 Score=149.64 Aligned_cols=102 Identities=24% Similarity=0.394 Sum_probs=80.1
Q ss_pred EEEEeeCCCcccEEEecccceeeeccCCCccceeeCCC---------CcCccceEEEEeecccccCCCCCCceeEEEEEe
Q psy14677 357 RLYPFKGDTQLPVLHIHRQSAFLMGRDRKVADIPVDHP---------SCSKQHAALQYRLTDYTREDGSKGKRIRLYIID 427 (483)
Q Consensus 357 rL~VfKGge~~eti~L~~qs~ylIGRd~~~cDIvLdDP---------SISRqHAvIq~r~~~~~~edG~~~~~vr~yIiD 427 (483)
+|+++..+ .+.+.|.. ..++|||++ .|||+|++| +|||+||.|.+.... . ....++|.|
T Consensus 4 rL~~~~~~--~~~~~L~~-~~~~iGR~~-~cdi~l~~~~~~~~~~~~~ISr~H~~I~~~~~~----~----~~~~~~i~d 71 (116)
T d1gxca_ 4 RLWALQDG--FANLECVN-DNYWFGRDK-SCEYCFDEPLLKRTDKYRTYSKKHFRIFREVGP----K----NSYIAYIED 71 (116)
T ss_dssp EEEECSTT--CCCEEECS-SEEEEESST-TCSEECCCGGGGGSSGGGGSCTTCEEEEEEECT----T----SSEEEEEEE
T ss_pred EEEecCCC--CceEEeCC-CCEEeeeCC-CCCeEecCCccccccccceEecceEEEEEeccc----C----CCCEEEEEC
Confidence 67777653 45688865 689999998 699999987 699999999876421 1 123566677
Q ss_pred CCCCCceEecCEEcCCCceEEcCCCCEEEEcCcceEEEEeecCC
Q psy14677 428 LESANGTFVNNKKIDPKRYVELLEKDVIKFGFSSREYVLLHEHS 471 (483)
Q Consensus 428 LGSTNGTFVNGeRI~p~r~veLkdGDvIrFG~STReYVLl~e~S 471 (483)
+ |+|||||||++|.++.+++|++||+|+||.....++++.+.+
T Consensus 72 ~-S~NGT~vN~~~i~~~~~~~L~~gD~I~ig~~~~~~f~f~d~~ 114 (116)
T d1gxca_ 72 H-SGNGTFVNTELVGKGKRRPLNNNSEIALSLSRNKVFVFFDLT 114 (116)
T ss_dssp C-CSSCEEETTEECCTTCEEECCTTEEEEESSTTCEEEEEEETT
T ss_pred C-CccCceECCEEcCCCCEEECCCCCEEEECCCEeEEEEEEEcc
Confidence 6 999999999999999999999999999998876554554443
No 5
>d2piea1 b.26.1.2 (A:13-139) Ubiquitin ligase protein RNF8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.76 E-value=1.7e-18 Score=150.46 Aligned_cols=101 Identities=24% Similarity=0.386 Sum_probs=83.3
Q ss_pred CceEEEEeeCCCcccEEEecccceeeeccCCCccceeeCCCC----cCccceEEEEeecccccCCCCCCceeEEEEEeCC
Q psy14677 354 RRWRLYPFKGDTQLPVLHIHRQSAFLMGRDRKVADIPVDHPS----CSKQHAALQYRLTDYTREDGSKGKRIRLYIIDLE 429 (483)
Q Consensus 354 ~~WrL~VfKGge~~eti~L~~qs~ylIGRd~~~cDIvLdDPS----ISRqHAvIq~r~~~~~~edG~~~~~vr~yIiDLG 429 (483)
..|.|... +...+.+.|..+..++|||+. .|+++|+++. |||.||.|.+.. +| .|+|+|++
T Consensus 4 ~~w~L~r~--g~~~~~~~l~~~~~~tiGR~~-~~~~~l~~~~~~~~VSR~Ha~i~~~~------~g------~~~l~D~~ 68 (127)
T d2piea1 4 RSWCLRRV--GMSAGWLLLEDGCEVTVGRGF-GVTYQLVSKICPLMISRNHCVLKQNP------EG------QWTIMDNK 68 (127)
T ss_dssp EEEEEEET--TCSSCBEEECTTCCEEEESSS-SSSEECCCSSCTTSSCSSCEEEEECT------TS------CEEEEECS
T ss_pred ceEEEEEc--cCCCCeEEcCCCCEEEeccCC-CccEEECCCCcccccchhheEEEECC------CC------eEEEEECC
Confidence 35877655 334456777777889999998 6999999886 999999998753 34 59999999
Q ss_pred CCCceEecCEEcCCCceEEcCCCCEEEEcCc-------ceEEEEeec
Q psy14677 430 SANGTFVNNKKIDPKRYVELLEKDVIKFGFS-------SREYVLLHE 469 (483)
Q Consensus 430 STNGTFVNGeRI~p~r~veLkdGDvIrFG~S-------TReYVLl~e 469 (483)
|+|||||||.+|.++.++.|.+||+|.||.. .++|.+..+
T Consensus 69 S~NGt~lNg~~l~~~~~~~L~~GD~I~iG~p~~~~~~~~f~~~~~~~ 115 (127)
T d2piea1 69 SLNGVWLNRARLEPLRVYSIHQGDYIQLGVPLENKENAEYEYEVTEE 115 (127)
T ss_dssp CSSCEEETTEECCTTCCEECCTTCEEEESCCCTTCSSCSEEEEEEEE
T ss_pred CcCCeEECCEEccCCceeEcCCCCEEEeCCCCCCCcceEEEEEeCcc
Confidence 9999999999999999999999999999942 577776643
No 6
>d2affa1 b.26.1.2 (A:3-100) Antigen ki-67 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=7.1e-18 Score=138.38 Aligned_cols=90 Identities=29% Similarity=0.308 Sum_probs=75.7
Q ss_pred EEEeeCCCcccEEEecccceeeeccCCCccceeeCCCCcCccceEEEEeecccccCCCCCCceeEEEEEeCCCCCceEec
Q psy14677 358 LYPFKGDTQLPVLHIHRQSAFLMGRDRKVADIPVDHPSCSKQHAALQYRLTDYTREDGSKGKRIRLYIIDLESANGTFVN 437 (483)
Q Consensus 358 L~VfKGge~~eti~L~~qs~ylIGRd~~~cDIvLdDPSISRqHAvIq~r~~~~~~edG~~~~~vr~yIiDLGSTNGTFVN 437 (483)
+.+.+++..+..+.|.. ..++|||+. .|||+|.+++||+.||.|.+.. + .|+|.|++|+||||||
T Consensus 6 i~i~~~g~~g~~~~L~~-~~~~IGr~~-~~di~l~~~~is~~Ha~i~~~~-------~------~~~i~d~~s~ng~~vN 70 (98)
T d2affa1 6 VTIKRSGVDGPHFPLSL-STCLFGRGI-ECDIRIQLPVVSKQHCKIEIHE-------Q------EAILHNFSSTNPTQVN 70 (98)
T ss_dssp EEECTTSCEEEEEECCS-SEEEEESST-TSSEEECCTTSCSSBEEEEECS-------S------CEEEEECCSSSCCEET
T ss_pred EEEEcCCCCceEEEECC-CCEEEeeCC-CCCEEeCCCCcCceeEEEEEeC-------C------EEEEEECCCcccceEC
Confidence 44445666677888865 579999998 6999999999999999998863 2 5999999999999999
Q ss_pred CEEcCCCceEEcCCCCEEEEcCcceEE
Q psy14677 438 NKKIDPKRYVELLEKDVIKFGFSSREY 464 (483)
Q Consensus 438 GeRI~p~r~veLkdGDvIrFG~STReY 464 (483)
|++|.. +++|.+||+|+||...+.|
T Consensus 71 g~~l~~--~~~L~~Gd~I~iG~~~~~f 95 (98)
T d2affa1 71 GSVIDE--PVRLKHGDVITIIDRSFRY 95 (98)
T ss_dssp TEECSS--CEEECTTCEEEETTEEEEE
T ss_pred CEECCC--ceECCCCCEEEECCEEEEE
Confidence 999964 4789999999999775444
No 7
>d1lgpa_ b.26.1.2 (A:) Cell cycle checkpoint protein Chfr {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.73 E-value=1.2e-18 Score=147.00 Aligned_cols=92 Identities=21% Similarity=0.330 Sum_probs=70.7
Q ss_pred ceE-EEEeeCCCcccEEEecccceeeeccCCCccceeeC-CCCcCccceEEEEeecccccCCCCCCceeEEEEEeCCCCC
Q psy14677 355 RWR-LYPFKGDTQLPVLHIHRQSAFLMGRDRKVADIPVD-HPSCSKQHAALQYRLTDYTREDGSKGKRIRLYIIDLESAN 432 (483)
Q Consensus 355 ~Wr-L~VfKGge~~eti~L~~qs~ylIGRd~~~cDIvLd-DPSISRqHAvIq~r~~~~~~edG~~~~~vr~yIiDLGSTN 432 (483)
+|. |..+.+......+.+. +..++|||++ .|||+|. +++|||.||.|.+.. ++ .++++|++|+|
T Consensus 3 pwg~Li~~~~~~~~~~~~l~-~~~~~iGR~~-~~di~l~d~~~iSr~Ha~I~~~~------~~------~~~~~~d~S~n 68 (113)
T d1lgpa_ 3 PWGRLLRLGAEEGEPHVLLR-KREWTIGRRR-GCDLSFPSNKLVSGDHCRIVVDE------KS------GQVTLEDTSTS 68 (113)
T ss_dssp CCEEECCTTCCSSSCCEEEC-SSEEEEESST-TSSEECTTCTTSCTTCEEEEECT------TT------CCEEEEECSSS
T ss_pred CeEEEEEECCCCCceEEEeC-CCCEeeCCCC-CCCeEecCCCCcChHHeEEEEcc------ce------eeEEecCCCce
Confidence 353 4444444444455554 4679999998 6999996 689999999998853 12 25566666999
Q ss_pred ceEecCEEcCCCceEEcCCCCEEEEcCc
Q psy14677 433 GTFVNNKKIDPKRYVELLEKDVIKFGFS 460 (483)
Q Consensus 433 GTFVNGeRI~p~r~veLkdGDvIrFG~S 460 (483)
||||||.+|.++.+++|++||+|.||..
T Consensus 69 GT~vNg~~i~~~~~~~L~~GD~I~i~~~ 96 (113)
T d1lgpa_ 69 GTVINKLKVVKKQTCPLQTGDVIYLVYR 96 (113)
T ss_dssp CCCCCCCCCCCSSCCCCCTTCEEEEECC
T ss_pred eeEECCEEcCCCceEECCCCCEEEEeec
Confidence 9999999999988899999999999843
No 8
>d1dmza_ b.26.1.2 (A:) Phosphotyrosine binding domain of Rad53 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.72 E-value=2.4e-17 Score=147.24 Aligned_cols=101 Identities=16% Similarity=0.231 Sum_probs=82.0
Q ss_pred EEEEeeCCCcccEEEeccc-ceeeeccCCCccceeeCCCCcCccceEEEEeecccccCC--CCCCceeEEEEEeCCCCCc
Q psy14677 357 RLYPFKGDTQLPVLHIHRQ-SAFLMGRDRKVADIPVDHPSCSKQHAALQYRLTDYTRED--GSKGKRIRLYIIDLESANG 433 (483)
Q Consensus 357 rL~VfKGge~~eti~L~~q-s~ylIGRd~~~cDIvLdDPSISRqHAvIq~r~~~~~~ed--G~~~~~vr~yIiDLGSTNG 433 (483)
.|.++++....+.+.|... ..|+|||++ .|||+|.++.||+.||.|.+......... ........+||.|+ |+||
T Consensus 7 ~L~~l~~~~~~~~i~i~~~~~~~~iGR~~-~~d~~i~~~~vS~~H~~I~~~~~~~~~~~~~~~~~~~~~~~l~D~-S~NG 84 (158)
T d1dmza_ 7 TLKPLPDSIIQESLEIQQGVNPFFIGRSE-DCNCKIEDNRLSRVHCFIFKKRHAVGKSMYESPAQGLDDIWYCHT-GTNV 84 (158)
T ss_dssp EEEECTTSSCCCCEEETTSCSCEEEESST-TSSEECCCTTSCSSSEEEEEEECCCCCCCSSCSCSSCEEEEEEEC-STTC
T ss_pred EEEEccCCCcceeEEEccCCCcEEecCCc-CccEEECCCcccCcceEEEEeccccccccccccccCCCcEEEEec-CCCC
Confidence 6888888888889999753 579999998 69999999999999999988643211100 00112457999999 9999
Q ss_pred eEecCEEcCCCceEEcCCCCEEEEcC
Q psy14677 434 TFVNNKKIDPKRYVELLEKDVIKFGF 459 (483)
Q Consensus 434 TFVNGeRI~p~r~veLkdGDvIrFG~ 459 (483)
|||||++|.++.++.|++||+|.||.
T Consensus 85 t~vN~~~~~~~~~~~l~~gD~i~~~~ 110 (158)
T d1dmza_ 85 SYLNNNRMIQGTKFLLQDGDEIKIIW 110 (158)
T ss_dssp CEETTEECCSSEEEECCSSCCEESCC
T ss_pred eEECCEEcCCCceEECCCCCEEEEcc
Confidence 99999999999999999999999983
No 9
>d1g6ga_ b.26.1.2 (A:) Phosphotyrosine binding domain of Rad53 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.71 E-value=1.4e-17 Score=143.55 Aligned_cols=81 Identities=21% Similarity=0.305 Sum_probs=67.6
Q ss_pred ccceeeeccCCCccceeeC-CCCcCccceEEEEeecccccCCCCCCceeEEEEEeCCCCCceEecCEEcCCCceEEcCCC
Q psy14677 374 RQSAFLMGRDRKVADIPVD-HPSCSKQHAALQYRLTDYTREDGSKGKRIRLYIIDLESANGTFVNNKKIDPKRYVELLEK 452 (483)
Q Consensus 374 ~qs~ylIGRd~~~cDIvLd-DPSISRqHAvIq~r~~~~~~edG~~~~~vr~yIiDLGSTNGTFVNGeRI~p~r~veLkdG 452 (483)
.+..|+|||++ .||++|. +|.|||.||.|.+.. + .+|++|++|+|||||||++|.++.+++|++|
T Consensus 34 ~~~~~~iGR~~-~~d~~l~d~~~VSr~Ha~i~~~~------~-------~~~~~d~~S~NGT~vNg~~l~~~~~~~L~~G 99 (127)
T d1g6ga_ 34 IKKVWTFGRNP-ACDYHLGNISRLSNKHFQILLGE------D-------GNLLLNDISTNGTWLNGQKVEKNSNQLLSQG 99 (127)
T ss_dssp CCEEEEEESST-TSSEECCSCTTSCSSCEEEEECT------T-------SCEEEEECCSSCCEETTEECCTTCCEECCTT
T ss_pred CCccEEEccCc-ccCccCCCcchhhHHHHHeeecc------c-------EEEEEECCCcceeEECCEEecCCCEEEcCCC
Confidence 34678999998 6999996 589999999998753 2 3778888999999999999999999999999
Q ss_pred CEEEEcCc----ceEEEEee
Q psy14677 453 DVIKFGFS----SREYVLLH 468 (483)
Q Consensus 453 DvIrFG~S----TReYVLl~ 468 (483)
|+|+||.+ ...|+++.
T Consensus 100 D~I~iG~~~~~~~v~~~~~~ 119 (127)
T d1g6ga_ 100 DEITVGVGVESDILSLVIFI 119 (127)
T ss_dssp CEEEECTTSGGGCEEEEEEE
T ss_pred CEEEECCCCCCceEEEEEEE
Confidence 99999954 34455443
No 10
>d2brfa1 b.26.1.2 (A:8-108) Polynucleotide kinase 3'-phosphatase {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.70 E-value=3.9e-17 Score=136.33 Aligned_cols=98 Identities=17% Similarity=0.227 Sum_probs=73.8
Q ss_pred EEEEeeCCCcccEEEec-ccceeeeccCCCccceeeCCCCcCccceEEEEeecccccCCCCCCceeEEEEEeCCCCCceE
Q psy14677 357 RLYPFKGDTQLPVLHIH-RQSAFLMGRDRKVADIPVDHPSCSKQHAALQYRLTDYTREDGSKGKRIRLYIIDLESANGTF 435 (483)
Q Consensus 357 rL~VfKGge~~eti~L~-~qs~ylIGRd~~~cDIvLdDPSISRqHAvIq~r~~~~~~edG~~~~~vr~yIiDLGSTNGTF 435 (483)
+|++.......+.+.|. ....++|||++ .|+ |.++.|||+||.|.+... ++ .|+|.|+ |+||||
T Consensus 2 rl~l~~p~g~~p~i~l~~~~~~~~iGR~~-~~~--i~d~~vSr~Ha~i~~~~~-----~~------~~~v~~~-s~Ngt~ 66 (101)
T d2brfa1 2 RLWLESPPGEAPPIFLPSDGQALVLGRGP-LTQ--VTDRKCSRTQVELVADPE-----TR------TVAVKQL-GVNPST 66 (101)
T ss_dssp EEEEECSTTSSCCEECCSTTCCEEECSBT-TTT--BCCTTSCSSCEEEEEETT-----TT------EEEEEEC-SSSCCE
T ss_pred eEEEEecCCCCCcEEEecCCCeEEcccCc-ccc--ccCCCcChhheEEEeccC-----ce------eEEEEcC-CCcceE
Confidence 34444443333444443 34578999986 365 579999999999987632 22 5677777 789999
Q ss_pred ecCEEcCCCceEEcCCCCEEEEcCcceEEEEeec
Q psy14677 436 VNNKKIDPKRYVELLEKDVIKFGFSSREYVLLHE 469 (483)
Q Consensus 436 VNGeRI~p~r~veLkdGDvIrFG~STReYVLl~e 469 (483)
|||++|.++.+++|.+||+|.||...+.|.|..+
T Consensus 67 vNg~~l~~~~~~~L~~GD~i~l~~~~~~y~v~fe 100 (101)
T d2brfa1 67 TGTQELKPGLEGSLGVGDTLYLVNGLHPLTLRWE 100 (101)
T ss_dssp EC-CBCCTTCEEEEETTCEEEEETTEEEEEEEEE
T ss_pred EEEEEeccceeeECCCCCEEEEcCCeEEEEEEEE
Confidence 9999999999999999999999999999988764
No 11
>d2g1la1 b.26.1.2 (A:498-599) Kinesin-like protein kif1c {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.63 E-value=1.2e-15 Score=125.92 Aligned_cols=96 Identities=18% Similarity=0.170 Sum_probs=72.9
Q ss_pred EEEEeeCCCc--ccEEEecccceeeeccCCCccceeeCCCCcCccceEEEEeecccccCCCCCCceeEEEEEeCCCCCce
Q psy14677 357 RLYPFKGDTQ--LPVLHIHRQSAFLMGRDRKVADIPVDHPSCSKQHAALQYRLTDYTREDGSKGKRIRLYIIDLESANGT 434 (483)
Q Consensus 357 rL~VfKGge~--~eti~L~~qs~ylIGRd~~~cDIvLdDPSISRqHAvIq~r~~~~~~edG~~~~~vr~yIiDLGSTNGT 434 (483)
+|+.+..+.. ...++......++|||. .|||+|.++.||++||+|.+... .++ ..++|.|++|+|||
T Consensus 3 hL~~l~~Dp~~s~~~~y~l~~~~~~iGr~--~~dI~l~~~~vs~~Ha~i~~~~~----~~~-----~~~~i~d~~s~~gt 71 (102)
T d2g1la1 3 HLVNLNEDPLMSECLLYHIKDGVTRVGQV--DMDIKLTGQFIREQHCLFRSIPQ----PDG-----EVVVTLEPCEGAET 71 (102)
T ss_dssp EEEECCSSCCSSSCCEEECCSEEEEEESS--SCSEECCCTTCCSEEEEEEEEEC----TTS-----CEEEEEEECTTCCE
T ss_pred EEEEecCCCccCceEEEEcCCCcEECCCC--CcCEEecccceeeeeeEEEEEEc----CCC-----cEEEEecCCCCCCe
Confidence 4555544322 22334445578999995 59999999999999999987642 122 37999999999999
Q ss_pred EecCEEcCCCceEEcCCCCEEEEcCcceEEEE
Q psy14677 435 FVNNKKIDPKRYVELLEKDVIKFGFSSREYVL 466 (483)
Q Consensus 435 FVNGeRI~p~r~veLkdGDvIrFG~STReYVL 466 (483)
||||++|.. +++|++||+|.||.+. .|+|
T Consensus 72 ~VNg~~i~~--~~~L~~gD~I~~G~~~-~frf 100 (102)
T d2g1la1 72 YVNGKLVTE--PLVLKSGNRIVMGKNH-VFRF 100 (102)
T ss_dssp EETTEECCS--CEECCTTCEEEETTTE-EEEE
T ss_pred EECCeEccc--eeEcCCCCEEEECCCE-EEEE
Confidence 999999964 5899999999999764 4655
No 12
>d1wlna1 b.26.1.2 (A:8-114) Afadin {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.56 E-value=7e-15 Score=123.14 Aligned_cols=82 Identities=17% Similarity=0.260 Sum_probs=66.8
Q ss_pred EEEecccceeeeccCC-CccceeeCCCCcCccceEEEEeecccccCCCCCCceeEEEEEeCCCCCceEecCEEcCCCceE
Q psy14677 369 VLHIHRQSAFLMGRDR-KVADIPVDHPSCSKQHAALQYRLTDYTREDGSKGKRIRLYIIDLESANGTFVNNKKIDPKRYV 447 (483)
Q Consensus 369 ti~L~~qs~ylIGRd~-~~cDIvLdDPSISRqHAvIq~r~~~~~~edG~~~~~vr~yIiDLGSTNGTFVNGeRI~p~r~v 447 (483)
.+.|. ...++|||+. ..|||+|.++.||++||.|.+.. + .|+|.|++|+|||||||++|.. ++
T Consensus 23 ~~~l~-~~~~~iG~~rs~~~dI~L~~~~Vs~~Ha~i~~~~-------~------~~~l~d~~s~~gt~vng~~v~~--~~ 86 (107)
T d1wlna1 23 LYRLQ-LSVTEVGTEKFDDNSIQLFGPGIQPHHCDLTNMD-------G------VVTVTPRSMDAETYVDGQRISE--TT 86 (107)
T ss_dssp EEECC-SEEEECSSSCCSTTCCCCCCTTCCSSCEEEEESS-------S------CEEEEESCSSSCEEETSCBCSS--CE
T ss_pred EEEEC-CCCEEECCCCCCCCcEEECCcceeeeEEEEEEcc-------c------ccEEecCCCCcceEEccccccc--ee
Confidence 34454 4689999752 36999999999999999998752 2 4999999999999999999974 47
Q ss_pred EcCCCCEEEEcCcceEEEEe
Q psy14677 448 ELLEKDVIKFGFSSREYVLL 467 (483)
Q Consensus 448 eLkdGDvIrFG~STReYVLl 467 (483)
+|..||+|.||.+ ..|.|.
T Consensus 87 ~L~~gd~i~iG~~-~~Frf~ 105 (107)
T d1wlna1 87 MLQSGMRLQFGTS-HVFKFV 105 (107)
T ss_dssp EECTTCEEEETTT-EEEEEE
T ss_pred ECCCCCEEEECCc-eEEEEe
Confidence 8999999999975 345554
No 13
>d1dm9a_ d.66.1.3 (A:) Heat shock protein 15 kD {Escherichia coli [TaxId: 562]}
Probab=69.76 E-value=2.4 Score=34.07 Aligned_cols=33 Identities=9% Similarity=0.114 Sum_probs=25.4
Q ss_pred CceEecCEEcCCCceEEcCCCCEEEEcCcceEEEE
Q psy14677 432 NGTFVNNKKIDPKRYVELLEKDVIKFGFSSREYVL 466 (483)
Q Consensus 432 NGTFVNGeRI~p~r~veLkdGDvIrFG~STReYVL 466 (483)
+-..|||+++.++ +.++.||+|+|-.....+++
T Consensus 30 G~V~vNg~~vKps--~~vk~GDvI~i~~~~~~~~i 62 (104)
T d1dm9a_ 30 GKVHYNGQRSKPS--KIVELNATLTLRQGNDERTV 62 (104)
T ss_dssp TCEEETTEECCTT--CBCCTTCEEEEEETTEEEEE
T ss_pred CCeeeCCeecccc--ccCCCCCEEEEEeCCeEEEE
Confidence 4577999998765 67999999998766555554
No 14
>d1vioa2 d.66.1.5 (A:0-57) Pseudouridine synthase RsuA N-terminal domain {Haemophilus influenzae [TaxId: 727]}
Probab=40.67 E-value=5 Score=28.48 Aligned_cols=32 Identities=16% Similarity=0.233 Sum_probs=24.5
Q ss_pred CceEecCEEcCCCceEEcCCCCEEEEcCcceEE
Q psy14677 432 NGTFVNNKKIDPKRYVELLEKDVIKFGFSSREY 464 (483)
Q Consensus 432 NGTFVNGeRI~p~r~veLkdGDvIrFG~STReY 464 (483)
...+|||..+.... +.+.+||.|.|-.....|
T Consensus 26 g~V~Vng~~v~~~~-~~v~~~d~I~~~g~~l~~ 57 (58)
T d1vioa2 26 SAVKINGEIVKSGS-VQISQEDEIYFEDELLTW 57 (58)
T ss_dssp TCEEETTEECCCTT-CEECTTSCEEETTEECCS
T ss_pred CeEEECCEEeCCCC-CCCCCCCEEEECCEEccc
Confidence 45789999997533 679999999997665544
No 15
>d1h3fa2 d.66.1.4 (A:352-432) Tyrosyl-tRNA synthetase (TyrRS), C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=39.90 E-value=23 Score=26.49 Aligned_cols=31 Identities=13% Similarity=0.229 Sum_probs=21.2
Q ss_pred CCceEecCEEcCCCce-EEcCCCCEEEEcCcc
Q psy14677 431 ANGTFVNNKKIDPKRY-VELLEKDVIKFGFSS 461 (483)
Q Consensus 431 TNGTFVNGeRI~p~r~-veLkdGDvIrFG~ST 461 (483)
.+|.+|||++|..-.+ +....+-+|++|.-.
T Consensus 42 ~g~V~iN~~ki~d~~~~l~~~~~~il~~GKK~ 73 (81)
T d1h3fa2 42 NRGLRLDGEVLTDPMLQVDLSRPRILQRGKDR 73 (81)
T ss_dssp TTCEEETTEECCCTTCEEECSSCEEEEETTTE
T ss_pred cCCEEECCEEecCccceecCCCeEEEEecCcc
Confidence 4899999999964333 334445578888653
No 16
>d1p9ka_ d.66.1.6 (A:) Hypothetical protein YbcJ {Escherichia coli [TaxId: 562]}
Probab=30.63 E-value=13 Score=27.98 Aligned_cols=33 Identities=15% Similarity=0.132 Sum_probs=24.2
Q ss_pred CceEecCEEcCCCceEEcCCCCEEEEcCcceEEE
Q psy14677 432 NGTFVNNKKIDPKRYVELLEKDVIKFGFSSREYV 465 (483)
Q Consensus 432 NGTFVNGeRI~p~r~veLkdGDvIrFG~STReYV 465 (483)
....|||+.+... ...+.+||+|.|......+|
T Consensus 46 G~V~VNG~~~~~p-~~~V~~~d~I~vdG~~i~iv 78 (79)
T d1p9ka_ 46 GQVKVDGAVETRK-RCKIVAGQTVSFAGHSVQVV 78 (79)
T ss_dssp HHHEETTBCCCCS-SCCCCSSEEEEETTEEEEEE
T ss_pred CCcccCCEEeccc-cccCCCCCEEEECCEEEEEE
Confidence 4578999988532 25789999999987655543
No 17
>d1c06a_ d.66.1.2 (A:) Ribosomal protein S4 {Bacillus stearothermophilus [TaxId: 1422]}
Probab=25.79 E-value=20 Score=30.60 Aligned_cols=28 Identities=7% Similarity=0.081 Sum_probs=21.6
Q ss_pred CceEecCEEcCCCceEEcCCCCEEEEcCc
Q psy14677 432 NGTFVNNKKIDPKRYVELLEKDVIKFGFS 460 (483)
Q Consensus 432 NGTFVNGeRI~p~r~veLkdGDvIrFG~S 460 (483)
+-.+|||.+|.-- .+.|++||+|.+=..
T Consensus 76 ghi~vNgk~v~iP-Sy~vk~GDvIsvkek 103 (159)
T d1c06a_ 76 GHILVDGSRVNIP-SYRVKPGQTIAVREK 103 (159)
T ss_dssp SCEEETTEECCCS-SCCCCSSCEEEECGG
T ss_pred cceEccceEEEec-ceeecCCcEEeeccc
Confidence 4577999988642 368999999999644
No 18
>d1vjka_ d.15.3.1 (A:) Molybdopterin synthase subunit MoaD {Pyrococcus furiosus [TaxId: 2261]}
Probab=24.75 E-value=18 Score=26.61 Aligned_cols=24 Identities=25% Similarity=0.152 Sum_probs=18.0
Q ss_pred eEecCEEcCCCceEEcCCCCEEEEcC
Q psy14677 434 TFVNNKKIDPKRYVELLEKDVIKFGF 459 (483)
Q Consensus 434 TFVNGeRI~p~r~veLkdGDvIrFG~ 459 (483)
.+|||+.+... ..|++||+|.|-.
T Consensus 62 iavN~~~~~~d--~~L~~gDevai~P 85 (88)
T d1vjka_ 62 IAVNGRYVSWD--EELKDGDVVGVFP 85 (88)
T ss_dssp EEETTBCCCTT--CBCCTTCEEEEES
T ss_pred EEEcceEcCCC--cCcCCCCEEEEeC
Confidence 45677777654 5799999999854
No 19
>d1jh3a_ d.66.1.4 (A:) Tyrosyl-tRNA synthetase (TyrRS), C-terminal domain {Bacillus stearothermophilus [TaxId: 1422]}
Probab=21.38 E-value=47 Score=25.41 Aligned_cols=30 Identities=20% Similarity=0.299 Sum_probs=20.9
Q ss_pred CCCceEecCEEcCCCceEEcCCCC-------EEEEcCc
Q psy14677 430 SANGTFVNNKKIDPKRYVELLEKD-------VIKFGFS 460 (483)
Q Consensus 430 STNGTFVNGeRI~p~r~veLkdGD-------vIrFG~S 460 (483)
..+|.+|||++|..-.+ .|..+| +|+.|.-
T Consensus 55 ~~ggv~iN~~kv~d~~~-~l~~~~~~~~~~~ll~~GKK 91 (99)
T d1jh3a_ 55 QNGAIYVNGERLQDVGA-ILTAEHRLEGRFTVIRRGKK 91 (99)
T ss_dssp HSTTEEETTEECCSTTT-CCSSTTTSSSSEEEEEETTS
T ss_pred HcCCEEECCEEecCccc-ccCHhHccCCCEEEEEecCC
Confidence 35899999999975332 444444 7888865
Done!