BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14678
(129 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5ZKA2|SYIM_CHICK Isoleucine--tRNA ligase, mitochondrial OS=Gallus gallus GN=IARS2
PE=2 SV=1
Length = 1000
Score = 136 bits (342), Expect = 5e-32, Method: Composition-based stats.
Identities = 61/93 (65%), Positives = 75/93 (80%), Gaps = 3/93 (3%)
Query: 23 GFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYV 82
GF ELYSWQR+ K EF LHDGPPYANG PH+GHA+NKILKDIT R ++++G +VHYV
Sbjct: 78 GFLELYSWQRQR-KAKQEFCLHDGPPYANGDPHVGHALNKILKDITNRFHMMRGYKVHYV 136
Query: 83 PGWDCHGLPIELKAITSKD--KLLSPLDIRKKG 113
PGWDCHGLPIELKA++ + LSP++IR+K
Sbjct: 137 PGWDCHGLPIELKALSEVKGAENLSPVEIRQKA 169
>sp|Q9NSE4|SYIM_HUMAN Isoleucine--tRNA ligase, mitochondrial OS=Homo sapiens GN=IARS2
PE=1 SV=2
Length = 1012
Score = 133 bits (334), Expect = 4e-31, Method: Composition-based stats.
Identities = 64/121 (52%), Positives = 84/121 (69%), Gaps = 9/121 (7%)
Query: 1 ILEYISLYLQDLFKNIPDL-----SECGFSELYSWQREALNGKPEFILHDGPPYANGTPH 55
+L S ++ L + PD +CGFSELYSWQRE K EF LHDGPPYANG PH
Sbjct: 65 LLPQTSFPMKLLGRQQPDTELEIQQKCGFSELYSWQRER-KVKTEFCLHDGPPYANGDPH 123
Query: 56 IGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAITS---KDKLLSPLDIRKK 112
+GHA+NKILKDI R +++ G ++H+VPGWDCHGLPIE+K ++ + + LS ++IRKK
Sbjct: 124 VGHALNKILKDIANRFHMMNGSKIHFVPGWDCHGLPIEIKVLSELGREAQNLSAMEIRKK 183
Query: 113 G 113
Sbjct: 184 A 184
>sp|Q8BIJ6|SYIM_MOUSE Isoleucine--tRNA ligase, mitochondrial OS=Mus musculus GN=Iars2
PE=2 SV=1
Length = 1012
Score = 132 bits (332), Expect = 6e-31, Method: Composition-based stats.
Identities = 59/96 (61%), Positives = 74/96 (77%), Gaps = 4/96 (4%)
Query: 21 ECGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVH 80
+CGFSELYSWQRE K EF LHDGPPYANG PH+GHA+NKILKDI R ++++G +VH
Sbjct: 90 KCGFSELYSWQRER-KVKTEFCLHDGPPYANGDPHVGHALNKILKDIANRFHMMRGSKVH 148
Query: 81 YVPGWDCHGLPIELKAITS---KDKLLSPLDIRKKG 113
+VPGWDCHGLPIE K ++ + LS ++IR+K
Sbjct: 149 FVPGWDCHGLPIETKVLSELGVDAQSLSAMEIREKA 184
>sp|Q4R646|SYIM_MACFA Isoleucine--tRNA ligase, mitochondrial (Fragment) OS=Macaca
fascicularis GN=IARS2 PE=2 SV=2
Length = 993
Score = 131 bits (330), Expect = 9e-31, Method: Composition-based stats.
Identities = 59/96 (61%), Positives = 75/96 (78%), Gaps = 4/96 (4%)
Query: 21 ECGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVH 80
+CGFSELYSWQRE K EF LHDGPPYANG PH+GHA+NKILKDI R +++ G +VH
Sbjct: 71 KCGFSELYSWQRER-KVKTEFCLHDGPPYANGDPHVGHALNKILKDIANRFHMMSGSKVH 129
Query: 81 YVPGWDCHGLPIELKAITS---KDKLLSPLDIRKKG 113
+VPGWDCHGLPIE+K ++ + + LS ++IR+K
Sbjct: 130 FVPGWDCHGLPIEIKVLSELGREAQNLSAMEIREKA 165
>sp|Q9USL3|SYIM_SCHPO Isoleucine--tRNA ligase, mitochondrial OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ism1 PE=3 SV=1
Length = 973
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 56/87 (64%), Positives = 67/87 (77%)
Query: 25 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 84
S+LY WQ+E LN + F+L DGPP+ANG HIGHA+NKILKDI R LL+G+ VHYVPG
Sbjct: 64 SDLYEWQKENLNKEDSFVLLDGPPFANGRLHIGHALNKILKDIINRWQLLKGRSVHYVPG 123
Query: 85 WDCHGLPIELKAITSKDKLLSPLDIRK 111
WDCHGLPIE KAI + + S L+IRK
Sbjct: 124 WDCHGLPIESKAIKANAERKSSLEIRK 150
>sp|Q7NF75|SYI_GLOVI Isoleucine--tRNA ligase OS=Gloeobacter violaceus (strain PCC 7421)
GN=ileS PE=3 SV=1
Length = 983
Score = 113 bits (282), Expect = 3e-25, Method: Composition-based stats.
Identities = 52/95 (54%), Positives = 65/95 (68%), Gaps = 11/95 (11%)
Query: 30 WQREALNGKPE-------FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYV 82
W+ + + G+ FILHDGPPYANG H+GHA+NKILKDI R LLQG+RV YV
Sbjct: 36 WEEQGIYGRLAQENPGEIFILHDGPPYANGELHVGHALNKILKDIINRYQLLQGRRVRYV 95
Query: 83 PGWDCHGLPIELKAI----TSKDKLLSPLDIRKKG 113
PGWDCHGLPIELK + ++ L+PLD+R +
Sbjct: 96 PGWDCHGLPIELKVLQDLSQAERSQLTPLDVRTRA 130
>sp|Q8YXY3|SYI_NOSS1 Isoleucine--tRNA ligase OS=Nostoc sp. (strain PCC 7120 / UTEX 2576)
GN=ileS PE=3 SV=1
Length = 960
Score = 113 bits (282), Expect = 4e-25, Method: Composition-based stats.
Identities = 50/77 (64%), Positives = 62/77 (80%), Gaps = 4/77 (5%)
Query: 41 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAI--- 97
FILHDGPPYANG+ HIGHA+NKILKDI R LLQG++V YVPGWDCHGLPIELK +
Sbjct: 53 FILHDGPPYANGSLHIGHALNKILKDIINRYQLLQGRKVRYVPGWDCHGLPIELKVLQNL 112
Query: 98 -TSKDKLLSPLDIRKKG 113
+++ + L+PL +R+K
Sbjct: 113 KSAERQNLTPLQLRQKA 129
>sp|Q7U9G9|SYI_SYNPX Isoleucine--tRNA ligase OS=Synechococcus sp. (strain WH8102)
GN=ileS PE=3 SV=1
Length = 974
Score = 113 bits (282), Expect = 4e-25, Method: Composition-based stats.
Identities = 50/87 (57%), Positives = 62/87 (71%), Gaps = 4/87 (4%)
Query: 36 NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELK 95
N P F LHDGPPYANG H+GHA+NK+LKD+ + +L+G+RV YVPGWDCHGLPIELK
Sbjct: 57 NDGPTFTLHDGPPYANGALHMGHALNKVLKDVINKYQVLKGRRVRYVPGWDCHGLPIELK 116
Query: 96 AITSKD----KLLSPLDIRKKGLHLPR 118
+ S D K L+P+ +RKK R
Sbjct: 117 VLQSMDQEQRKALTPIKLRKKAAAYAR 143
>sp|B0JSP4|SYI_MICAN Isoleucine--tRNA ligase OS=Microcystis aeruginosa (strain NIES-843)
GN=ileS PE=3 SV=1
Length = 952
Score = 112 bits (280), Expect = 7e-25, Method: Composition-based stats.
Identities = 54/95 (56%), Positives = 67/95 (70%), Gaps = 11/95 (11%)
Query: 30 WQREAL-------NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYV 82
WQ E + N K FILHDGPPYANG+ HIGHA+NKILKDI + LLQG +V YV
Sbjct: 35 WQDEQIYEKLAQNNPKELFILHDGPPYANGSLHIGHALNKILKDIINKYKLLQGYKVRYV 94
Query: 83 PGWDCHGLPIELKAI----TSKDKLLSPLDIRKKG 113
PGWDCHGLPIELK + +S+ + L+P+ +R+K
Sbjct: 95 PGWDCHGLPIELKVLQSLKSSEKEGLTPVKLRQKA 129
>sp|Q0I1V8|SYI_HAES1 Isoleucine--tRNA ligase OS=Haemophilus somnus (strain 129Pt)
GN=ileS PE=3 SV=1
Length = 937
Score = 112 bits (279), Expect = 9e-25, Method: Composition-based stats.
Identities = 54/86 (62%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Query: 11 DLFKNIPDLSECGFSE-LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITL 69
DL K PD+ + + + LY REA GK FILHDGPPYANGT H+GHAVNKILKDI +
Sbjct: 20 DLAKREPDMLKNWYDKNLYQKVREASKGKKTFILHDGPPYANGTLHLGHAVNKILKDIIM 79
Query: 70 RSNLLQGKRVHYVPGWDCHGLPIELK 95
+S G YVPGWDCHGLPIELK
Sbjct: 80 KSKTALGFDTPYVPGWDCHGLPIELK 105
>sp|B0UV12|SYI_HAES2 Isoleucine--tRNA ligase OS=Haemophilus somnus (strain 2336) GN=ileS
PE=3 SV=1
Length = 937
Score = 112 bits (279), Expect = 9e-25, Method: Composition-based stats.
Identities = 54/86 (62%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Query: 11 DLFKNIPDLSECGFSE-LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITL 69
DL K PD+ + + + LY REA GK FILHDGPPYANGT H+GHAVNKILKDI +
Sbjct: 20 DLAKREPDMLKNWYDKNLYQKVREASKGKKTFILHDGPPYANGTLHLGHAVNKILKDIIM 79
Query: 70 RSNLLQGKRVHYVPGWDCHGLPIELK 95
+S G YVPGWDCHGLPIELK
Sbjct: 80 KSKTALGFDTPYVPGWDCHGLPIELK 105
>sp|A0KG39|SYI_AERHH Isoleucine--tRNA ligase OS=Aeromonas hydrophila subsp. hydrophila
(strain ATCC 7966 / NCIB 9240) GN=ileS PE=3 SV=1
Length = 953
Score = 111 bits (278), Expect = 1e-24, Method: Composition-based stats.
Identities = 53/86 (61%), Positives = 62/86 (72%), Gaps = 1/86 (1%)
Query: 11 DLFKNIPDLSECGFSE-LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITL 69
DL K P++ + + + LY R A GKP FILHDGPPYANG+ HIGH+VNKILKDI +
Sbjct: 20 DLAKREPNMLKRWYDQDLYGAIRRAKAGKPSFILHDGPPYANGSIHIGHSVNKILKDIII 79
Query: 70 RSNLLQGKRVHYVPGWDCHGLPIELK 95
+S L G YVPGWDCHGLPIELK
Sbjct: 80 KSKGLSGFDSPYVPGWDCHGLPIELK 105
>sp|A4SIX5|SYI_AERS4 Isoleucine--tRNA ligase OS=Aeromonas salmonicida (strain A449)
GN=ileS PE=3 SV=1
Length = 953
Score = 111 bits (277), Expect = 1e-24, Method: Composition-based stats.
Identities = 52/86 (60%), Positives = 62/86 (72%), Gaps = 1/86 (1%)
Query: 11 DLFKNIPDLSECGFSE-LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITL 69
DL K P++ + + + LY R A GKP FILHDGPPYANG+ HIGH+VNKILKD+ +
Sbjct: 20 DLAKREPNMLKRWYDQDLYGAIRRAKAGKPSFILHDGPPYANGSIHIGHSVNKILKDVII 79
Query: 70 RSNLLQGKRVHYVPGWDCHGLPIELK 95
+S L G YVPGWDCHGLPIELK
Sbjct: 80 KSKGLSGFDSPYVPGWDCHGLPIELK 105
>sp|P73505|SYI_SYNY3 Isoleucine--tRNA ligase OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=ileS PE=3 SV=1
Length = 988
Score = 111 bits (277), Expect = 2e-24, Method: Composition-based stats.
Identities = 52/95 (54%), Positives = 65/95 (68%), Gaps = 11/95 (11%)
Query: 30 WQREAL-------NGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYV 82
WQ + + N K F+LHDGPPYANG H+GHA+NK+LKDI + LLQG +VHYV
Sbjct: 35 WQEKGIYADLADNNPKDLFVLHDGPPYANGALHMGHALNKVLKDIINKYKLLQGHKVHYV 94
Query: 83 PGWDCHGLPIELKAI----TSKDKLLSPLDIRKKG 113
PGWDCHGLPIELK + +S+ L+PL +R K
Sbjct: 95 PGWDCHGLPIELKVLQSLKSSERAELTPLTLRHKA 129
>sp|B3GZN4|SYI_ACTP7 Isoleucine--tRNA ligase OS=Actinobacillus pleuropneumoniae serotype
7 (strain AP76) GN=ileS PE=3 SV=1
Length = 938
Score = 110 bits (276), Expect = 2e-24, Method: Composition-based stats.
Identities = 53/86 (61%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 11 DLFKNIPDLSECGFSE-LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITL 69
DL K PD+ + + + LY RE+ GK FILHDGPPYANG HIGHAVNKILKDI +
Sbjct: 20 DLAKREPDMLKNWYDKNLYQKVRESSKGKKSFILHDGPPYANGNIHIGHAVNKILKDIIM 79
Query: 70 RSNLLQGKRVHYVPGWDCHGLPIELK 95
+S G YVPGWDCHGLPIELK
Sbjct: 80 KSKTALGFDTPYVPGWDCHGLPIELK 105
>sp|A3MYB6|SYI_ACTP2 Isoleucine--tRNA ligase OS=Actinobacillus pleuropneumoniae serotype
5b (strain L20) GN=ileS PE=3 SV=1
Length = 938
Score = 110 bits (276), Expect = 2e-24, Method: Composition-based stats.
Identities = 53/86 (61%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 11 DLFKNIPDLSECGFSE-LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITL 69
DL K PD+ + + + LY RE+ GK FILHDGPPYANG HIGHAVNKILKDI +
Sbjct: 20 DLAKREPDMLKNWYDKNLYQKVRESSKGKKSFILHDGPPYANGNIHIGHAVNKILKDIIM 79
Query: 70 RSNLLQGKRVHYVPGWDCHGLPIELK 95
+S G YVPGWDCHGLPIELK
Sbjct: 80 KSKTALGFDTPYVPGWDCHGLPIELK 105
>sp|Q9CKF7|SYI_PASMU Isoleucine--tRNA ligase OS=Pasteurella multocida (strain Pm70)
GN=ileS PE=3 SV=1
Length = 932
Score = 110 bits (275), Expect = 2e-24, Method: Composition-based stats.
Identities = 52/86 (60%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Query: 11 DLFKNIPDLSECGFS-ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITL 69
DL K P++ + + +LY R+A GK FILHDGPPYANGT HIGHAVNKILKDI +
Sbjct: 21 DLAKREPNMLKSWYEKDLYQKIRQASKGKKSFILHDGPPYANGTIHIGHAVNKILKDIIV 80
Query: 70 RSNLLQGKRVHYVPGWDCHGLPIELK 95
+S G Y+PGWDCHGLPIELK
Sbjct: 81 KSKTALGYDSPYIPGWDCHGLPIELK 106
>sp|Q0VSE1|SYI_ALCBS Isoleucine--tRNA ligase OS=Alcanivorax borkumensis (strain SK2 /
ATCC 700651 / DSM 11573) GN=ileS PE=3 SV=1
Length = 937
Score = 110 bits (275), Expect = 3e-24, Method: Composition-based stats.
Identities = 50/76 (65%), Positives = 56/76 (73%)
Query: 19 LSECGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKR 78
L E +LY REA G+P+FILHDGPPYANG HIGHAVNKILKD+ ++S L G
Sbjct: 29 LKEWQQKQLYQKIREAFAGRPKFILHDGPPYANGDIHIGHAVNKILKDMIVKSRTLAGFD 88
Query: 79 VHYVPGWDCHGLPIEL 94
YVPGWDCHGLPIEL
Sbjct: 89 APYVPGWDCHGLPIEL 104
>sp|C6DF04|SYI_PECCP Isoleucine--tRNA ligase OS=Pectobacterium carotovorum subsp.
carotovorum (strain PC1) GN=ileS PE=3 SV=1
Length = 937
Score = 110 bits (274), Expect = 3e-24, Method: Composition-based stats.
Identities = 53/86 (61%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Query: 11 DLFKNIPDLSECGFSE-LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITL 69
DL K PD+ + + + LY R A GK FILHDGPPYANG+ HIGH+VNKILKDI +
Sbjct: 20 DLAKREPDMLKRWYEQDLYGIIRNAKKGKKTFILHDGPPYANGSIHIGHSVNKILKDIIV 79
Query: 70 RSNLLQGKRVHYVPGWDCHGLPIELK 95
+S L G YVPGWDCHGLPIELK
Sbjct: 80 KSKGLSGYDSPYVPGWDCHGLPIELK 105
>sp|Q6D0C3|SYI_ERWCT Isoleucine--tRNA ligase OS=Erwinia carotovora subsp. atroseptica
(strain SCRI 1043 / ATCC BAA-672) GN=ileS PE=3 SV=1
Length = 937
Score = 110 bits (274), Expect = 3e-24, Method: Composition-based stats.
Identities = 53/86 (61%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Query: 11 DLFKNIPDLSECGFSE-LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITL 69
DL K PD+ + + + LY R A GK FILHDGPPYANG+ HIGH+VNKILKDI +
Sbjct: 20 DLAKREPDMLKRWYEQDLYGIIRNAKKGKKTFILHDGPPYANGSIHIGHSVNKILKDIIV 79
Query: 70 RSNLLQGKRVHYVPGWDCHGLPIELK 95
+S L G YVPGWDCHGLPIELK
Sbjct: 80 KSKGLSGYDSPYVPGWDCHGLPIELK 105
>sp|B2IZP5|SYI_NOSP7 Isoleucine--tRNA ligase OS=Nostoc punctiforme (strain ATCC 29133 /
PCC 73102) GN=ileS PE=3 SV=1
Length = 959
Score = 110 bits (274), Expect = 3e-24, Method: Composition-based stats.
Identities = 48/77 (62%), Positives = 62/77 (80%), Gaps = 4/77 (5%)
Query: 41 FILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWDCHGLPIELKAI--- 97
FILHDGPPYANG+ HIGHA+NKILKDI R +L+G++V YVPGWDCHGLPIELK +
Sbjct: 53 FILHDGPPYANGSLHIGHALNKILKDIINRYQMLRGRKVRYVPGWDCHGLPIELKVLQNM 112
Query: 98 -TSKDKLLSPLDIRKKG 113
+++ + L+PL +R+K
Sbjct: 113 KSAERQNLTPLQLRQKA 129
>sp|Q7WKD5|SYI_BORBR Isoleucine--tRNA ligase OS=Bordetella bronchiseptica (strain ATCC
BAA-588 / NCTC 13252 / RB50) GN=ileS PE=3 SV=1
Length = 953
Score = 110 bits (274), Expect = 4e-24, Method: Composition-based stats.
Identities = 57/112 (50%), Positives = 70/112 (62%), Gaps = 15/112 (13%)
Query: 11 DLFKNIPD-LSECGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITL 69
DL K P ++E +++Y R A G+P F+LHDGPPYANG HIGHAVNKILKDI +
Sbjct: 19 DLAKREPGWVAEWEETQVYQAIRAASRGRPRFVLHDGPPYANGDIHIGHAVNKILKDIIV 78
Query: 70 RSNLLQGKRVHYVPGWDCHGLPIELKAITSKDKLLSPLDIRKK-GLHLPRLE 120
+S + G HYVPGWDCHG+PIE++ I KK G HLP E
Sbjct: 79 KSRNMAGYDAHYVPGWDCHGMPIEIQ-------------IEKKYGKHLPVTE 117
>sp|Q7W8Z2|SYI_BORPA Isoleucine--tRNA ligase OS=Bordetella parapertussis (strain 12822 /
ATCC BAA-587 / NCTC 13253) GN=ileS PE=3 SV=1
Length = 953
Score = 109 bits (273), Expect = 4e-24, Method: Composition-based stats.
Identities = 57/112 (50%), Positives = 70/112 (62%), Gaps = 15/112 (13%)
Query: 11 DLFKNIPD-LSECGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITL 69
DL K P ++E +++Y R A G+P F+LHDGPPYANG HIGHAVNKILKDI +
Sbjct: 19 DLAKREPGWVAEWEETQVYQAIRAASRGRPRFVLHDGPPYANGDIHIGHAVNKILKDIIV 78
Query: 70 RSNLLQGKRVHYVPGWDCHGLPIELKAITSKDKLLSPLDIRKK-GLHLPRLE 120
+S + G HYVPGWDCHG+PIE++ I KK G HLP E
Sbjct: 79 KSRNMAGYDAHYVPGWDCHGMPIEIQ-------------IEKKYGKHLPVTE 117
>sp|Q7VXK3|SYI_BORPE Isoleucine--tRNA ligase OS=Bordetella pertussis (strain Tohama I /
ATCC BAA-589 / NCTC 13251) GN=ileS PE=3 SV=1
Length = 953
Score = 109 bits (273), Expect = 4e-24, Method: Composition-based stats.
Identities = 57/112 (50%), Positives = 70/112 (62%), Gaps = 15/112 (13%)
Query: 11 DLFKNIPD-LSECGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITL 69
DL K P ++E +++Y R A G+P F+LHDGPPYANG HIGHAVNKILKDI +
Sbjct: 19 DLAKREPGWVAEWEETQVYQAIRAASRGRPRFVLHDGPPYANGDIHIGHAVNKILKDIIV 78
Query: 70 RSNLLQGKRVHYVPGWDCHGLPIELKAITSKDKLLSPLDIRKK-GLHLPRLE 120
+S + G HYVPGWDCHG+PIE++ I KK G HLP E
Sbjct: 79 KSRNMAGYDAHYVPGWDCHGMPIEIQ-------------IEKKYGKHLPVTE 117
>sp|Q747X9|SYI_GEOSL Isoleucine--tRNA ligase OS=Geobacter sulfurreducens (strain ATCC
51573 / DSM 12127 / PCA) GN=ileS PE=3 SV=1
Length = 923
Score = 109 bits (273), Expect = 5e-24, Method: Composition-based stats.
Identities = 56/105 (53%), Positives = 68/105 (64%), Gaps = 10/105 (9%)
Query: 26 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 85
+LY +A GKP ++LHDGPPYANG HIGHA+NKILKDI L+S +QG YVPGW
Sbjct: 35 DLYGTIAKAGKGKPRYVLHDGPPYANGHIHIGHALNKILKDIILKSKRMQGFDAPYVPGW 94
Query: 86 DCHGLPIEL---KAITSKDKLLSPLDIRK-------KGLHLPRLE 120
DCHGLPIEL K + SK + L +RK K +H+ R E
Sbjct: 95 DCHGLPIELQVEKNLGSKKHETTKLQMRKQCREYAEKFVHVQRAE 139
>sp|Q3SHS3|SYI_THIDA Isoleucine--tRNA ligase OS=Thiobacillus denitrificans (strain ATCC
25259) GN=ileS PE=3 SV=1
Length = 929
Score = 109 bits (272), Expect = 6e-24, Method: Composition-based stats.
Identities = 51/91 (56%), Positives = 60/91 (65%), Gaps = 8/91 (8%)
Query: 29 SWQ--------REALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVH 80
SWQ R A G+P+FILHDGPPYANG HIGHAVNKILKDI +++ L G
Sbjct: 31 SWQEKKRYEAIRAAAAGRPKFILHDGPPYANGDIHIGHAVNKILKDIIVKAKTLSGFDAP 90
Query: 81 YVPGWDCHGLPIELKAITSKDKLLSPLDIRK 111
YVPGWDCHGLPIEL+ + K + P R+
Sbjct: 91 YVPGWDCHGLPIELQVEKTHGKDIPPAKFRE 121
>sp|Q4QLU5|SYI_HAEI8 Isoleucine--tRNA ligase OS=Haemophilus influenzae (strain 86-028NP)
GN=ileS PE=3 SV=1
Length = 941
Score = 109 bits (272), Expect = 6e-24, Method: Composition-based stats.
Identities = 55/106 (51%), Positives = 69/106 (65%), Gaps = 4/106 (3%)
Query: 11 DLFKNIPDLSECGFSE-LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITL 69
DL K PD+ + + + LY R+A GK FILHDGPPYANG HIGHAVNKILKDI +
Sbjct: 21 DLAKREPDMLKNWYEKNLYQKIRKASKGKKSFILHDGPPYANGNIHIGHAVNKILKDIII 80
Query: 70 RSNLLQGKRVHYVPGWDCHGLPIELKA---ITSKDKLLSPLDIRKK 112
+S G Y+PGWDCHGLPIELK + ++ +S + R+K
Sbjct: 81 KSKTALGFDSPYIPGWDCHGLPIELKVEGLVGKPNEKISAAEFRQK 126
>sp|Q889E4|SYI_PSESM Isoleucine--tRNA ligase OS=Pseudomonas syringae pv. tomato (strain
DC3000) GN=ileS PE=3 SV=1
Length = 943
Score = 108 bits (271), Expect = 6e-24, Method: Composition-based stats.
Identities = 51/79 (64%), Positives = 56/79 (70%)
Query: 27 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 86
LY RE +P+F+LHDGPPYANGT HIGHAVNKILKD+ LRS L G YVPGWD
Sbjct: 37 LYQKLREIGKDRPKFVLHDGPPYANGTIHIGHAVNKILKDMILRSKTLAGFDAPYVPGWD 96
Query: 87 CHGLPIELKAITSKDKLLS 105
CHGLPIE K + K LS
Sbjct: 97 CHGLPIEHKVEVTHGKNLS 115
>sp|B4F2T5|SYI_PROMH Isoleucine--tRNA ligase OS=Proteus mirabilis (strain HI4320)
GN=ileS PE=3 SV=1
Length = 936
Score = 108 bits (271), Expect = 7e-24, Method: Composition-based stats.
Identities = 52/86 (60%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Query: 11 DLFKNIPDLSECGFSE-LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITL 69
DL K P++ + E LY R+A +GK FILHDGPPYANG HIGH+VNKILKDI +
Sbjct: 20 DLAKREPEMLSRWYKEGLYQAIRQAKSGKKTFILHDGPPYANGNIHIGHSVNKILKDIII 79
Query: 70 RSNLLQGKRVHYVPGWDCHGLPIELK 95
+S L G Y+PGWDCHGLPIELK
Sbjct: 80 KSKGLSGFDSPYIPGWDCHGLPIELK 105
>sp|A4XQV5|SYI_PSEMY Isoleucine--tRNA ligase OS=Pseudomonas mendocina (strain ymp)
GN=ileS PE=3 SV=1
Length = 943
Score = 108 bits (271), Expect = 7e-24, Method: Composition-based stats.
Identities = 52/86 (60%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Query: 27 LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGWD 86
LYS R+ G+P+F+LHDGPPYANG+ HIGHAVNKILKDI RS L G YVPGWD
Sbjct: 37 LYSKLRKIGEGRPKFVLHDGPPYANGSIHIGHAVNKILKDIITRSKTLAGFDAPYVPGWD 96
Query: 87 CHGLPIELKAITSKDKLLSPLDIRKK 112
CHGLPIE K T+ K P D+ ++
Sbjct: 97 CHGLPIEHKVETTFGK-NQPADLTRE 121
>sp|A5UIA3|SYI_HAEIG Isoleucine--tRNA ligase OS=Haemophilus influenzae (strain PittGG)
GN=ileS PE=3 SV=1
Length = 941
Score = 108 bits (271), Expect = 7e-24, Method: Composition-based stats.
Identities = 55/106 (51%), Positives = 69/106 (65%), Gaps = 4/106 (3%)
Query: 11 DLFKNIPDLSECGFSE-LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITL 69
DL K PD+ + + + LY R+A GK FILHDGPPYANG HIGHAVNKILKDI +
Sbjct: 21 DLAKREPDMLKNWYEKNLYQKIRKASKGKKSFILHDGPPYANGNIHIGHAVNKILKDIII 80
Query: 70 RSNLLQGKRVHYVPGWDCHGLPIELKA---ITSKDKLLSPLDIRKK 112
+S G Y+PGWDCHGLPIELK + ++ +S + R+K
Sbjct: 81 KSKTALGFDSPYIPGWDCHGLPIELKVEGLVGKPNEKISAAEFRQK 126
>sp|A5UDA6|SYI_HAEIE Isoleucine--tRNA ligase OS=Haemophilus influenzae (strain PittEE)
GN=ileS PE=3 SV=1
Length = 941
Score = 108 bits (271), Expect = 8e-24, Method: Composition-based stats.
Identities = 55/106 (51%), Positives = 69/106 (65%), Gaps = 4/106 (3%)
Query: 11 DLFKNIPDLSECGFSE-LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITL 69
DL K PD+ + + + LY R+A GK FILHDGPPYANG HIGHAVNKILKDI +
Sbjct: 21 DLAKREPDMLKNWYEKNLYQKIRKASKGKKSFILHDGPPYANGNIHIGHAVNKILKDIII 80
Query: 70 RSNLLQGKRVHYVPGWDCHGLPIELKA---ITSKDKLLSPLDIRKK 112
+S G Y+PGWDCHGLPIELK + ++ +S + R+K
Sbjct: 81 KSKTALGFDSPYIPGWDCHGLPIELKVEGLVGKPNEKISAAEFRQK 126
>sp|Q7MNM8|SYI_VIBVY Isoleucine--tRNA ligase OS=Vibrio vulnificus (strain YJ016) GN=ileS
PE=3 SV=1
Length = 948
Score = 108 bits (270), Expect = 8e-24, Method: Composition-based stats.
Identities = 54/106 (50%), Positives = 69/106 (65%), Gaps = 4/106 (3%)
Query: 11 DLFKNIPDLSECGFSE-LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITL 69
DL K P++ + + E LY R+A GK F+LHDGPPYANG HIGHA+NKILKDI +
Sbjct: 20 DLAKREPEMLKRWYQEDLYGEIRKAKKGKKSFVLHDGPPYANGDIHIGHALNKILKDIII 79
Query: 70 RSNLLQGKRVHYVPGWDCHGLPIEL---KAITSKDKLLSPLDIRKK 112
+S L G YVPGWDCHGLPIEL K + + ++ + R+K
Sbjct: 80 KSKTLSGFDAPYVPGWDCHGLPIELMVEKKVGKPGQKVTAAEFREK 125
>sp|Q8DES7|SYI_VIBVU Isoleucine--tRNA ligase OS=Vibrio vulnificus (strain CMCP6) GN=ileS
PE=3 SV=1
Length = 948
Score = 108 bits (270), Expect = 8e-24, Method: Composition-based stats.
Identities = 54/106 (50%), Positives = 69/106 (65%), Gaps = 4/106 (3%)
Query: 11 DLFKNIPDLSECGFSE-LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITL 69
DL K P++ + + E LY R+A GK F+LHDGPPYANG HIGHA+NKILKDI +
Sbjct: 20 DLAKREPEMLKRWYQEDLYGEIRKAKKGKKSFVLHDGPPYANGDIHIGHALNKILKDIII 79
Query: 70 RSNLLQGKRVHYVPGWDCHGLPIEL---KAITSKDKLLSPLDIRKK 112
+S L G YVPGWDCHGLPIEL K + + ++ + R+K
Sbjct: 80 KSKTLSGFDAPYVPGWDCHGLPIELMVEKKVGKPGQKVTAAEFREK 125
>sp|C3LST7|SYI_VIBCM Isoleucine--tRNA ligase OS=Vibrio cholerae serotype O1 (strain
M66-2) GN=ileS PE=3 SV=1
Length = 949
Score = 108 bits (270), Expect = 9e-24, Method: Composition-based stats.
Identities = 52/106 (49%), Positives = 69/106 (65%), Gaps = 4/106 (3%)
Query: 11 DLFKNIPDLSECGFSE-LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITL 69
DL K P++ + + E LY R+A GK F+LHDGPPYANG HIGHA+NKILKD+ +
Sbjct: 20 DLAKREPEMLQRWYQEDLYGAIRQAKKGKKSFVLHDGPPYANGDIHIGHALNKILKDVII 79
Query: 70 RSNLLQGKRVHYVPGWDCHGLPIEL---KAITSKDKLLSPLDIRKK 112
+S L G Y+PGWDCHGLPIEL K + + ++ + R+K
Sbjct: 80 KSKTLSGFDAPYIPGWDCHGLPIELMVEKKVGKPGQKVTAAEFREK 125
>sp|Q9KU47|SYI_VIBCH Isoleucine--tRNA ligase OS=Vibrio cholerae serotype O1 (strain ATCC
39315 / El Tor Inaba N16961) GN=ileS PE=3 SV=1
Length = 949
Score = 108 bits (270), Expect = 9e-24, Method: Composition-based stats.
Identities = 52/106 (49%), Positives = 69/106 (65%), Gaps = 4/106 (3%)
Query: 11 DLFKNIPDLSECGFSE-LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITL 69
DL K P++ + + E LY R+A GK F+LHDGPPYANG HIGHA+NKILKD+ +
Sbjct: 20 DLAKREPEMLQRWYQEDLYGAIRQAKKGKKSFVLHDGPPYANGDIHIGHALNKILKDVII 79
Query: 70 RSNLLQGKRVHYVPGWDCHGLPIEL---KAITSKDKLLSPLDIRKK 112
+S L G Y+PGWDCHGLPIEL K + + ++ + R+K
Sbjct: 80 KSKTLSGFDAPYIPGWDCHGLPIELMVEKKVGKPGQKVTAAEFREK 125
>sp|A5F8Z3|SYI_VIBC3 Isoleucine--tRNA ligase OS=Vibrio cholerae serotype O1 (strain ATCC
39541 / Ogawa 395 / O395) GN=ileS PE=3 SV=1
Length = 949
Score = 108 bits (270), Expect = 9e-24, Method: Composition-based stats.
Identities = 52/106 (49%), Positives = 69/106 (65%), Gaps = 4/106 (3%)
Query: 11 DLFKNIPDLSECGFSE-LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITL 69
DL K P++ + + E LY R+A GK F+LHDGPPYANG HIGHA+NKILKD+ +
Sbjct: 20 DLAKREPEMLQRWYQEDLYGAIRQAKKGKKSFVLHDGPPYANGDIHIGHALNKILKDVII 79
Query: 70 RSNLLQGKRVHYVPGWDCHGLPIEL---KAITSKDKLLSPLDIRKK 112
+S L G Y+PGWDCHGLPIEL K + + ++ + R+K
Sbjct: 80 KSKTLSGFDAPYIPGWDCHGLPIELMVEKKVGKPGQKVTAAEFREK 125
>sp|Q5NQQ7|SYI_ZYMMO Isoleucine--tRNA ligase OS=Zymomonas mobilis subsp. mobilis (strain
ATCC 31821 / ZM4 / CP4) GN=ileS PE=3 SV=1
Length = 941
Score = 108 bits (270), Expect = 1e-23, Method: Composition-based stats.
Identities = 48/70 (68%), Positives = 52/70 (74%)
Query: 26 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 85
+LY RE G FILHDGPPYANG HIGHA+NKILKDI +RS L GK V Y+PGW
Sbjct: 47 DLYQQLREQRKGAERFILHDGPPYANGDIHIGHALNKILKDIIMRSQTLLGKDVPYIPGW 106
Query: 86 DCHGLPIELK 95
DCHGLPIE K
Sbjct: 107 DCHGLPIEWK 116
>sp|Q7N8X2|SYI_PHOLL Isoleucine--tRNA ligase OS=Photorhabdus luminescens subsp.
laumondii (strain TT01) GN=ileS PE=3 SV=1
Length = 937
Score = 108 bits (270), Expect = 1e-23, Method: Composition-based stats.
Identities = 51/86 (59%), Positives = 62/86 (72%), Gaps = 1/86 (1%)
Query: 11 DLFKNIPDLSECGFS-ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITL 69
DL K P++ + + ELY R+A GK FILHDGPPYANG+ HIGH+VNKILKDI +
Sbjct: 20 DLAKREPNMLKRWYKDELYQVIRKAKAGKKTFILHDGPPYANGSIHIGHSVNKILKDIII 79
Query: 70 RSNLLQGKRVHYVPGWDCHGLPIELK 95
+S + G Y+PGWDCHGLPIELK
Sbjct: 80 KSKGMAGYDSPYIPGWDCHGLPIELK 105
>sp|Q21HK3|SYI_SACD2 Isoleucine--tRNA ligase OS=Saccharophagus degradans (strain 2-40 /
ATCC 43961 / DSM 17024) GN=ileS PE=3 SV=1
Length = 932
Score = 108 bits (269), Expect = 1e-23, Method: Composition-based stats.
Identities = 47/69 (68%), Positives = 53/69 (76%)
Query: 25 SELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPG 84
S+LY REA G+ +FILHDGPPYANG HIGHAVNKILKDI +++ L G YVPG
Sbjct: 35 SKLYEQIREARKGREQFILHDGPPYANGDIHIGHAVNKILKDIIIKAKTLSGFDAPYVPG 94
Query: 85 WDCHGLPIE 93
WDCHGLPIE
Sbjct: 95 WDCHGLPIE 103
>sp|A1K4R7|SYI_AZOSB Isoleucine--tRNA ligase OS=Azoarcus sp. (strain BH72) GN=ileS PE=3
SV=1
Length = 932
Score = 108 bits (269), Expect = 1e-23, Method: Composition-based stats.
Identities = 49/86 (56%), Positives = 60/86 (69%)
Query: 26 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 85
+LY R+A G+P+F+LHDGPPYANG H+GHA+NKILKDI +RS L G YVPGW
Sbjct: 36 KLYQKIRKAAAGRPKFVLHDGPPYANGNLHLGHALNKILKDIIVRSKTLAGFDAPYVPGW 95
Query: 86 DCHGLPIELKAITSKDKLLSPLDIRK 111
DCHGLPIE K + K L +R+
Sbjct: 96 DCHGLPIEHKVEVTHGKNLPADKVRE 121
>sp|Q3J8W1|SYI_NITOC Isoleucine--tRNA ligase OS=Nitrosococcus oceani (strain ATCC 19707
/ NCIMB 11848) GN=ileS PE=3 SV=1
Length = 940
Score = 108 bits (269), Expect = 1e-23, Method: Composition-based stats.
Identities = 48/69 (69%), Positives = 52/69 (75%)
Query: 26 ELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITLRSNLLQGKRVHYVPGW 85
+LY R A G+P FILHDGPPYANG HIGHAVNKILKDI ++S L G YVPGW
Sbjct: 36 DLYGKLRNAARGRPRFILHDGPPYANGAIHIGHAVNKILKDIIVKSKSLSGFDAPYVPGW 95
Query: 86 DCHGLPIEL 94
DCHGLPIEL
Sbjct: 96 DCHGLPIEL 104
>sp|C5B7M4|SYI_EDWI9 Isoleucine--tRNA ligase OS=Edwardsiella ictaluri (strain 93-146)
GN=ileS PE=3 SV=1
Length = 948
Score = 107 bits (268), Expect = 2e-23, Method: Composition-based stats.
Identities = 51/86 (59%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 11 DLFKNIPDLSECGFSE-LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITL 69
DL K P + + + + LY R A GK FILHDGPPYANG+ HIGH+VNKILKDI +
Sbjct: 20 DLAKREPGMLQHWYEQDLYGIIRNAKQGKKSFILHDGPPYANGSIHIGHSVNKILKDIII 79
Query: 70 RSNLLQGKRVHYVPGWDCHGLPIELK 95
+S L G Y+PGWDCHGLPIELK
Sbjct: 80 KSKGLSGYDSPYIPGWDCHGLPIELK 105
>sp|Q5P221|SYI_AROAE Isoleucine--tRNA ligase OS=Aromatoleum aromaticum (strain EbN1)
GN=ileS PE=3 SV=1
Length = 939
Score = 107 bits (268), Expect = 2e-23, Method: Composition-based stats.
Identities = 51/84 (60%), Positives = 60/84 (71%), Gaps = 1/84 (1%)
Query: 11 DLFKNIPD-LSECGFSELYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITL 69
DL K P +++ +LY R+A G+P+F+LHDGPPYANG HIGHAVNKILKDI +
Sbjct: 20 DLAKREPGWVADWQAKKLYQKVRKAAAGRPKFVLHDGPPYANGDIHIGHAVNKILKDIIV 79
Query: 70 RSNLLQGKRVHYVPGWDCHGLPIE 93
RS L G YVPGWDCHGLPIE
Sbjct: 80 RSKTLAGFDAPYVPGWDCHGLPIE 103
>sp|B1JKZ8|SYI_YERPY Isoleucine--tRNA ligase OS=Yersinia pseudotuberculosis serotype O:3
(strain YPIII) GN=ileS PE=3 SV=1
Length = 938
Score = 107 bits (268), Expect = 2e-23, Method: Composition-based stats.
Identities = 51/86 (59%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 11 DLFKNIPDLSECGFSE-LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITL 69
DL K PD+ + + + LY R A GK FILHDGPPYANG HIGH+VNKILKDI +
Sbjct: 20 DLAKREPDMLKRWYEQDLYGIIRAAKKGKKTFILHDGPPYANGNIHIGHSVNKILKDIIV 79
Query: 70 RSNLLQGKRVHYVPGWDCHGLPIELK 95
+S + G Y+PGWDCHGLPIELK
Sbjct: 80 KSKGMAGYDSPYIPGWDCHGLPIELK 105
>sp|Q66ES4|SYI_YERPS Isoleucine--tRNA ligase OS=Yersinia pseudotuberculosis serotype I
(strain IP32953) GN=ileS PE=3 SV=1
Length = 938
Score = 107 bits (268), Expect = 2e-23, Method: Composition-based stats.
Identities = 51/86 (59%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 11 DLFKNIPDLSECGFSE-LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITL 69
DL K PD+ + + + LY R A GK FILHDGPPYANG HIGH+VNKILKDI +
Sbjct: 20 DLAKREPDMLKRWYEQDLYGIIRAAKKGKKTFILHDGPPYANGNIHIGHSVNKILKDIIV 79
Query: 70 RSNLLQGKRVHYVPGWDCHGLPIELK 95
+S + G Y+PGWDCHGLPIELK
Sbjct: 80 KSKGMAGYDSPYIPGWDCHGLPIELK 105
>sp|A4TQF3|SYI_YERPP Isoleucine--tRNA ligase OS=Yersinia pestis (strain Pestoides F)
GN=ileS PE=3 SV=1
Length = 938
Score = 107 bits (268), Expect = 2e-23, Method: Composition-based stats.
Identities = 51/86 (59%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 11 DLFKNIPDLSECGFSE-LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITL 69
DL K PD+ + + + LY R A GK FILHDGPPYANG HIGH+VNKILKDI +
Sbjct: 20 DLAKREPDMLKRWYEQDLYGIIRAAKKGKKTFILHDGPPYANGNIHIGHSVNKILKDIIV 79
Query: 70 RSNLLQGKRVHYVPGWDCHGLPIELK 95
+S + G Y+PGWDCHGLPIELK
Sbjct: 80 KSKGMAGYDSPYIPGWDCHGLPIELK 105
>sp|Q1CMV1|SYI_YERPN Isoleucine--tRNA ligase OS=Yersinia pestis bv. Antiqua (strain
Nepal516) GN=ileS PE=3 SV=1
Length = 938
Score = 107 bits (268), Expect = 2e-23, Method: Composition-based stats.
Identities = 51/86 (59%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 11 DLFKNIPDLSECGFSE-LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITL 69
DL K PD+ + + + LY R A GK FILHDGPPYANG HIGH+VNKILKDI +
Sbjct: 20 DLAKREPDMLKRWYEQDLYGIIRAAKKGKKTFILHDGPPYANGNIHIGHSVNKILKDIIV 79
Query: 70 RSNLLQGKRVHYVPGWDCHGLPIELK 95
+S + G Y+PGWDCHGLPIELK
Sbjct: 80 KSKGMAGYDSPYIPGWDCHGLPIELK 105
>sp|A9R008|SYI_YERPG Isoleucine--tRNA ligase OS=Yersinia pestis bv. Antiqua (strain
Angola) GN=ileS PE=3 SV=1
Length = 938
Score = 107 bits (268), Expect = 2e-23, Method: Composition-based stats.
Identities = 51/86 (59%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 11 DLFKNIPDLSECGFSE-LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITL 69
DL K PD+ + + + LY R A GK FILHDGPPYANG HIGH+VNKILKDI +
Sbjct: 20 DLAKREPDMLKRWYEQDLYGIIRAAKKGKKTFILHDGPPYANGNIHIGHSVNKILKDIIV 79
Query: 70 RSNLLQGKRVHYVPGWDCHGLPIELK 95
+S + G Y+PGWDCHGLPIELK
Sbjct: 80 KSKGMAGYDSPYIPGWDCHGLPIELK 105
>sp|Q8ZIM0|SYI_YERPE Isoleucine--tRNA ligase OS=Yersinia pestis GN=ileS PE=3 SV=1
Length = 938
Score = 107 bits (268), Expect = 2e-23, Method: Composition-based stats.
Identities = 51/86 (59%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 11 DLFKNIPDLSECGFSE-LYSWQREALNGKPEFILHDGPPYANGTPHIGHAVNKILKDITL 69
DL K PD+ + + + LY R A GK FILHDGPPYANG HIGH+VNKILKDI +
Sbjct: 20 DLAKREPDMLKRWYEQDLYGIIRAAKKGKKTFILHDGPPYANGNIHIGHSVNKILKDIIV 79
Query: 70 RSNLLQGKRVHYVPGWDCHGLPIELK 95
+S + G Y+PGWDCHGLPIELK
Sbjct: 80 KSKGMAGYDSPYIPGWDCHGLPIELK 105
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.142 0.439
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,719,668
Number of Sequences: 539616
Number of extensions: 2253020
Number of successful extensions: 6830
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 2033
Number of HSP's successfully gapped in prelim test: 131
Number of HSP's that attempted gapping in prelim test: 4647
Number of HSP's gapped (non-prelim): 2226
length of query: 129
length of database: 191,569,459
effective HSP length: 95
effective length of query: 34
effective length of database: 140,305,939
effective search space: 4770401926
effective search space used: 4770401926
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)