BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14680
(78 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2ANN|A Chain A, Crystal Structure (I) Of Nova-1 Kh1KH2 DOMAIN TANDEM
WITH 25 NT RNA Hairpin
Length = 178
Score = 68.9 bits (167), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 39/42 (92%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
+K+L+PSYAAG+IIGKGG+TI Q+QK+TG+ IK+SK+ DFYP
Sbjct: 8 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP 49
Score = 42.4 bits (98), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 8 IRADGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKAND 54
+ D Q+KI+VP+ AG IIGKGG T+ I + +G+ +++S+ D
Sbjct: 98 VNPDRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPD 144
>pdb|2ANR|A Chain A, Crystal Structure (Ii) Of Nova-1 Kh1KH2 DOMAIN TANDEM
WITH 25NT RNA Hairpin
Length = 178
Score = 68.9 bits (167), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 39/42 (92%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
+K+L+PSYAAG+IIGKGG+TI Q+QK+TG+ IK+SK+ DFYP
Sbjct: 8 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP 49
Score = 42.4 bits (98), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 8 IRADGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKAND 54
+ D Q+KI+VP+ AG IIGKGG T+ I + +G+ +++S+ D
Sbjct: 98 VNPDRANQVKIIVPNSTAGLIIGKGGATVKAIXEQSGAWVQLSQKPD 144
>pdb|1EC6|A Chain A, Crystal Structure Of Nova-2 Kh3 K-Homology Rna-Binding
Domain Bound To 20-Mer Rna Hairpin
pdb|1EC6|B Chain B, Crystal Structure Of Nova-2 Kh3 K-Homology Rna-Binding
Domain Bound To 20-Mer Rna Hairpin
Length = 87
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 31/42 (73%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
++I VP GAI+GKGG+T+ + Q+ TG++I++SK +F P
Sbjct: 5 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLP 46
>pdb|1DT4|A Chain A, Crystal Structure Of Nova-1 Kh3 K-Homology Rna-Binding
Domain
Length = 73
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 30/42 (71%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
++I VP GAI+GKGG+T+ + Q+ TG +I++SK +F P
Sbjct: 5 VEIAVPENLVGAILGKGGKTLVEYQELTGCRIQISKKGEFLP 46
>pdb|1DTJ|A Chain A, Crystal Structure Of Nova-2 Kh3 K-Homology Rna-Binding
Domain
pdb|1DTJ|B Chain B, Crystal Structure Of Nova-2 Kh3 K-Homology Rna-Binding
Domain
pdb|1DTJ|C Chain C, Crystal Structure Of Nova-2 Kh3 K-Homology Rna-Binding
Domain
pdb|1DTJ|D Chain D, Crystal Structure Of Nova-2 Kh3 K-Homology Rna-Binding
Domain
Length = 76
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 31/42 (73%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
+++ VP GAI+GKGG+T+ + Q+ TG++I++SK +F P
Sbjct: 5 VEMAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLP 46
>pdb|1ZTG|A Chain A, Human Alpha Polyc Binding Protein Kh1
pdb|1ZTG|B Chain B, Human Alpha Polyc Binding Protein Kh1
pdb|1ZTG|C Chain C, Human Alpha Polyc Binding Protein Kh1
pdb|1ZTG|D Chain D, Human Alpha Polyc Binding Protein Kh1
Length = 74
Score = 38.9 bits (89), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 31/42 (73%)
Query: 12 GVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKAN 53
G+ I++L+ G+IIGK GE++ +I++++G++I +S+ N
Sbjct: 1 GILTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGN 42
>pdb|1X4M|A Chain A, Solution Structure Of Kh Domain In Far Upstream Element
Binding Protein 1
Length = 94
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 25/33 (75%)
Query: 17 KILVPSYAAGAIIGKGGETIAQIQKDTGSKIKM 49
+I++P+ AG +IGKGGETI Q+Q+ G K+ M
Sbjct: 18 EIMIPASKAGLVIGKGGETIKQLQERAGVKMVM 50
>pdb|1J4W|A Chain A, Complex Of The Kh3 And Kh4 Domains Of Fbp With A
Single_stranded 29mer Dna Oligonucleotide From The Fuse
Element Of The C-Myc Oncogene
Length = 174
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 27/40 (67%)
Query: 12 GVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSK 51
G+ + +VP+ G IIGKGGETI I + +G++I++ +
Sbjct: 102 GLQEFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQR 141
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 25/46 (54%)
Query: 12 GVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
G I + +P +A G +IG+ GE I +IQ D G +I+ + P
Sbjct: 1 GSHMIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTP 46
>pdb|2OPU|A Chain A, Solution Nmr Structure Of The First Domain Of Ksrp
Length = 89
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 20 VPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYPVYQV 61
VP G IIG+GGE I +IQ+D+G K+++S + P V
Sbjct: 22 VPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSV 63
>pdb|2OPV|A Chain A, Solution Nmr Structure Of The Second Domain Of Ksrp
Length = 85
Score = 37.0 bits (84), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 17 KILVPSYAAGAIIGKGGETIAQIQKDTGSKI 47
+I++P+ AG +IGKGGETI Q+Q+ G K+
Sbjct: 17 EIMIPAGKAGLVIGKGGETIKQLQERAGVKM 47
>pdb|2JVZ|A Chain A, Solution Nmr Structure Of The Second And Third Kh
Domains Of Ksrp
Length = 164
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 17 KILVPSYAAGAIIGKGGETIAQIQKDTGSKI 47
+I++P+ AG +IGKGGETI Q+Q+ G K+
Sbjct: 5 EIMIPAGKAGLVIGKGGETIKQLQERAGVKM 35
Score = 35.0 bits (79), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 25/42 (59%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
I + VP ++ G +IG+ GE I +IQ D G +I+ + + P
Sbjct: 93 IDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGP 134
>pdb|3VKE|A Chain A, Contribution Of The First K-Homology Domain Of
Poly(C)-Binding Protein 1 To Its Affinity And
Specificity For C-Rich Oligonucleotides
pdb|3VKE|B Chain B, Contribution Of The First K-Homology Domain Of
Poly(C)-Binding Protein 1 To Its Affinity And
Specificity For C-Rich Oligonucleotides
pdb|3VKE|C Chain C, Contribution Of The First K-Homology Domain Of
Poly(C)-Binding Protein 1 To Its Affinity And
Specificity For C-Rich Oligonucleotides
pdb|3VKE|D Chain D, Contribution Of The First K-Homology Domain Of
Poly(C)-Binding Protein 1 To Its Affinity And
Specificity For C-Rich Oligonucleotides
Length = 76
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 30/41 (73%)
Query: 13 VCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKAN 53
+ I++L+ G+IIGK GE++ +I++++G++I +S+ N
Sbjct: 2 MLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGN 42
>pdb|2JZX|A Chain A, Pcbp2 Kh1-Kh2 Domains
Length = 160
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 30/42 (71%), Gaps = 2/42 (4%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
++++VP+ G++IGKGG I +I++ TG+++++ A D P
Sbjct: 91 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLP 130
Score = 34.7 bits (78), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 29/38 (76%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKAN 53
I++L+ G+IIGK GE++ ++++++G++I +S+ N
Sbjct: 7 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN 44
>pdb|1J5K|A Chain A, Complex Of The Kh3 Domain Of Hnrnp K With A
Single_stranded 10mer Dna Oligonucleotide
Length = 89
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 27/39 (69%)
Query: 13 VCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSK 51
+ ++ +P AG+IIGKGG+ I QI+ ++G+ IK+ +
Sbjct: 13 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDE 51
>pdb|1ZZI|A Chain A, Crystal Structure Analysis Of The Third Kh Domain Of
Hnrnp K In Complex With Ssdna
pdb|1ZZI|B Chain B, Crystal Structure Analysis Of The Third Kh Domain Of
Hnrnp K In Complex With Ssdna
pdb|1ZZJ|A Chain A, Structure Of The Third Kh Domain Of Hnrnp K In Complex
With 15-Mer Ssdna
pdb|1ZZJ|B Chain B, Structure Of The Third Kh Domain Of Hnrnp K In Complex
With 15-Mer Ssdna
pdb|1ZZJ|C Chain C, Structure Of The Third Kh Domain Of Hnrnp K In Complex
With 15-Mer Ssdna
pdb|1ZZK|A Chain A, Crystal Structure Of The Third Kh Domain Of Hnrnp K At
0.95a Resolution
Length = 82
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 26/35 (74%)
Query: 17 KILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSK 51
++ +P AG+IIGKGG+ I QI+ ++G+ IK+ +
Sbjct: 10 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDE 44
>pdb|2HH3|A Chain A, Solution Structure Of The Third Kh Domain Of Ksrp
Length = 106
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 25/42 (59%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
I + VP ++ G +IG+ GE I +IQ D G +I+ + + P
Sbjct: 13 IDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGP 54
>pdb|1WE8|A Chain A, Solution Structure Of Kh Domain In Protein Bab28342
Length = 104
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 25/38 (65%)
Query: 17 KILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKAND 54
++ VP + G IIG+GGETI I K +G+KI K ++
Sbjct: 18 QLSVPQRSVGRIIGRGGETIRSICKASGAKITCDKESE 55
>pdb|4B8T|A Chain A, Rna Binding Protein Solution Structure Of The Third Kh
Domain Of Ksrp In Complex With The G-rich Target
Sequence
Length = 106
Score = 35.0 bits (79), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 25/42 (59%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
I + VP ++ G +IG+ GE I +IQ D G +I+ + + P
Sbjct: 13 IDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGP 54
>pdb|1X4N|A Chain A, Solution Structure Of Kh Domain In Fuse Binding Protein
1
Length = 92
Score = 34.3 bits (77), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 26/38 (68%)
Query: 20 VPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
VP G IIG+GGE I++IQ+++G KI+++ + P
Sbjct: 21 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP 58
>pdb|3KRM|A Chain A, Imp1 Kh34
pdb|3KRM|B Chain B, Imp1 Kh34
pdb|3KRM|C Chain C, Imp1 Kh34
Length = 163
Score = 33.9 bits (76), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 24/34 (70%)
Query: 14 CQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKI 47
+ I VP+ AAG +IGKGG+T+ ++Q T +++
Sbjct: 85 LETHIRVPASAAGRVIGKGGKTVNELQNLTAAEV 118
Score = 32.0 bits (71), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 24/35 (68%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMS 50
+++ +P+ A GAIIGK G+ I Q+ + + IK++
Sbjct: 5 VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIA 39
>pdb|2AXY|A Chain A, Crystal Structure Of Kh1 Domain Of Human Poly(C)-Binding
Protein-2 With C-Rich Strand Of Human Telomeric Dna
pdb|2AXY|B Chain B, Crystal Structure Of Kh1 Domain Of Human Poly(C)-Binding
Protein-2 With C-Rich Strand Of Human Telomeric Dna
pdb|2AXY|C Chain C, Crystal Structure Of Kh1 Domain Of Human Poly(C)-Binding
Protein-2 With C-Rich Strand Of Human Telomeric Dna
pdb|2AXY|D Chain D, Crystal Structure Of Kh1 Domain Of Human Poly(C)-Binding
Protein-2 With C-Rich Strand Of Human Telomeric Dna
pdb|2PQU|A Chain A, Crystal Structure Of Kh1 Domain Of Human Pcbp2 Complexed
To Single- Stranded 12-Mer Telomeric Dna
pdb|2PQU|B Chain B, Crystal Structure Of Kh1 Domain Of Human Pcbp2 Complexed
To Single- Stranded 12-Mer Telomeric Dna
pdb|2PQU|C Chain C, Crystal Structure Of Kh1 Domain Of Human Pcbp2 Complexed
To Single- Stranded 12-Mer Telomeric Dna
pdb|2PQU|D Chain D, Crystal Structure Of Kh1 Domain Of Human Pcbp2 Complexed
To Single- Stranded 12-Mer Telomeric Dna
pdb|2PY9|A Chain A, Protein-Rna Interaction Involving Kh1 Domain From Human
Poly(C)-Binding Protein-2
pdb|2PY9|B Chain B, Protein-Rna Interaction Involving Kh1 Domain From Human
Poly(C)-Binding Protein-2
pdb|2PY9|C Chain C, Protein-Rna Interaction Involving Kh1 Domain From Human
Poly(C)-Binding Protein-2
pdb|2PY9|D Chain D, Protein-Rna Interaction Involving Kh1 Domain From Human
Poly(C)-Binding Protein-2
Length = 73
Score = 33.5 bits (75), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 27/38 (71%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKAN 53
I++L G+IIGK GE++ + ++++G++I +S+ N
Sbjct: 7 IRLLXHGKEVGSIIGKKGESVKKXREESGARINISEGN 44
>pdb|2HH2|A Chain A, Solution Structure Of The Fourth Kh Domain Of Ksrp
Length = 107
Score = 32.7 bits (73), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 23/32 (71%)
Query: 20 VPSYAAGAIIGKGGETIAQIQKDTGSKIKMSK 51
+P++ G +IG+GGE + I + TG+ +++S+
Sbjct: 13 IPTHKCGLVIGRGGENVKAINQQTGAFVEISR 44
>pdb|1KHM|A Chain A, C-Terminal Kh Domain Of Hnrnp K (Kh3)
Length = 89
Score = 32.7 bits (73), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 26/39 (66%)
Query: 13 VCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSK 51
+ ++ +P A +IIGKGG+ I QI+ ++G+ IK+ +
Sbjct: 13 IITTQVTIPKDLARSIIGKGGQRIKQIRHESGASIKIDE 51
>pdb|1E3H|A Chain A, Semet Derivative Of Streptomyces Antibioticus PnpaseGPSI
Enzyme
Length = 757
Score = 29.6 bits (65), Expect = 0.41, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFY 56
I + +P G +IG + I QIQ+DTG++I + Y
Sbjct: 600 ITVKIPVDKIGEVIGPKRQXINQIQEDTGAEITIEDDGTIY 640
>pdb|1E3P|A Chain A, Tungstate Derivative Of Streptomyces Antibioticus Pnpase
Gpsi Enzyme
Length = 757
Score = 29.6 bits (65), Expect = 0.46, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFY 56
I + +P G +IG + I QIQ+DTG++I + Y
Sbjct: 600 ITVKIPVDKIGEVIGPKRQMINQIQEDTGAEITIEDDGTIY 640
>pdb|1WVN|A Chain A, Crsytal Structure Of Domain 3 Of Human Alpha Polyc
Binding Protein
Length = 82
Score = 27.3 bits (59), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 24/35 (68%)
Query: 17 KILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSK 51
++ +P+ G IIG+ G I +I++ +G++IK++
Sbjct: 9 ELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIAN 43
>pdb|2P2R|A Chain A, Crystal Structure Of The Third Kh Domain Of Human
Poly(C)- Binding Protein-2 In Complex With C-Rich
Strand Of Human Telomeric Dna
Length = 76
Score = 26.9 bits (58), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 24/35 (68%)
Query: 17 KILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSK 51
++ +P+ G IIG+ G I +I++ +G++IK++
Sbjct: 8 ELTIPNDLIGCIIGRQGAKINEIRQXSGAQIKIAN 42
>pdb|1TUA|A Chain A, 1.5 A Crystal Structure Of A Protein Of Unknown Function
Ape0754 From Aeropyrum Pernix
Length = 191
Score = 25.8 bits (55), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 26 GAIIGKGGETIAQIQKDTGSKIKMSKANDF 55
GA+IG GE A+I + TG+ I + N
Sbjct: 16 GAVIGPRGEVKAEIMRRTGTVITVDTENSM 45
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.138 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,258,512
Number of Sequences: 62578
Number of extensions: 75662
Number of successful extensions: 189
Number of sequences better than 100.0: 36
Number of HSP's better than 100.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 145
Number of HSP's gapped (non-prelim): 44
length of query: 78
length of database: 14,973,337
effective HSP length: 47
effective length of query: 31
effective length of database: 12,032,171
effective search space: 372997301
effective search space used: 372997301
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 45 (21.9 bits)