BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14680
(78 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9JKN6|NOVA1_MOUSE RNA-binding protein Nova-1 OS=Mus musculus GN=Nova1 PE=1 SV=2
Length = 507
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 41/47 (87%)
Query: 11 DGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
DG +K+L+PSYAAG+IIGKGG+TI Q+QK+TG+ IK+SK+ DFYP
Sbjct: 47 DGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP 93
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 31/42 (73%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
++I VP GAI+GKGG+T+ + Q+ TG++I++SK +F P
Sbjct: 424 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVP 465
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 15 QIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKAND 54
Q+KI+VP+ AG IIGKGG T+ I + +G+ +++S+ D
Sbjct: 173 QVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPD 212
>sp|Q2PFW9|NOVA1_MACFA RNA-binding protein Nova-1 OS=Macaca fascicularis GN=NOVA1 PE=2
SV=1
Length = 483
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 41/47 (87%)
Query: 11 DGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
DG +K+L+PSYAAG+IIGKGG+TI Q+QK+TG+ IK+SK+ DFYP
Sbjct: 47 DGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP 93
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 31/42 (73%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
++I VP GAI+GKGG+T+ + Q+ TG++I++SK +F P
Sbjct: 400 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVP 441
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 8 IRADGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKAND 54
+ D + Q+KI+VP+ AG IIGKGG T+ I + +G+ +++S+ D
Sbjct: 142 VNPDRIKQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPD 188
>sp|Q80WA4|NOVA1_RAT RNA-binding protein Nova-1 (Fragment) OS=Rattus norvegicus
GN=Nova1 PE=2 SV=1
Length = 474
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 41/47 (87%)
Query: 11 DGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
DG +K+L+PSYAAG+IIGKGG+TI Q+QK+TG+ IK+SK+ DFYP
Sbjct: 46 DGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP 92
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 31/42 (73%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
++I VP GAI+GKGG+T+ + Q+ TG++I++SK +F P
Sbjct: 399 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVP 440
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 8 IRADGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKAND 54
+ D + Q+KI+VP+ AG IIGKGG T+ I + +G+ +++S+ D
Sbjct: 141 VNPDRIKQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPD 187
>sp|Q9UNW9|NOVA2_HUMAN RNA-binding protein Nova-2 OS=Homo sapiens GN=NOVA2 PE=1 SV=1
Length = 492
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 39/42 (92%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
+K+L+PSYAAG+IIGKGG+TI Q+QK+TG+ IK+SK+ DFYP
Sbjct: 35 LKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP 76
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 31/42 (73%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
++I VP GAI+GKGG+T+ + Q+ TG++I++SK +F P
Sbjct: 409 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLP 450
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 29/44 (65%)
Query: 8 IRADGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSK 51
+ D Q K++VP+ AG IIGKGG T+ + + +G+ +++S+
Sbjct: 125 MNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQ 168
>sp|P51513|NOVA1_HUMAN RNA-binding protein Nova-1 OS=Homo sapiens GN=NOVA1 PE=1 SV=1
Length = 510
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 41/50 (82%), Gaps = 3/50 (6%)
Query: 11 DGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKI---KMSKANDFYP 57
DG +K+L+PSYAAG+IIGKGG+TI Q+QK+TG+ I K+SK+ DFYP
Sbjct: 47 DGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKLSKSKDFYP 96
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 31/42 (73%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
++I VP GAI+GKGG+T+ + Q+ TG++I++SK +F P
Sbjct: 427 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVP 468
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 29/40 (72%)
Query: 15 QIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKAND 54
Q+KI+VP+ AG IIGKGG T+ + + +G+ +++S+ D
Sbjct: 176 QVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPD 215
>sp|O74919|RNC1_SCHPO RNA-binding protein rnc1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=rnc1 PE=1 SV=1
Length = 398
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 6 PFIRADGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSK 51
PF++ V Q I +P+ G IIG+GG I++I++ +GSKI ++K
Sbjct: 314 PFLQQPKVTQ-NISIPADMVGCIIGRGGSKISEIRRTSGSKISIAK 358
Score = 29.6 bits (65), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 24/37 (64%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKA 52
++ L+ + AG IIGK G+ +A+++ T K ++KA
Sbjct: 96 LRALLSTREAGIIIGKAGKNVAELRSTTNVKAGVTKA 132
>sp|Q96I24|FUBP3_HUMAN Far upstream element-binding protein 3 OS=Homo sapiens GN=FUBP3
PE=1 SV=2
Length = 572
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 25/33 (75%)
Query: 17 KILVPSYAAGAIIGKGGETIAQIQKDTGSKIKM 49
+IL+P+ G +IG+GGETI Q+Q+ TG K+ M
Sbjct: 166 EILIPASKVGLVIGRGGETIKQLQERTGVKMVM 198
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
I++ VP +A G +IG+ GE I +IQ D G +I+ + P
Sbjct: 256 IEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISP 297
Score = 35.4 bits (80), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 12 GVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSK 51
GV +I VP+ G +IGKGGE I I + +G+ +++ +
Sbjct: 353 GVQEITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQR 392
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 25/38 (65%)
Query: 20 VPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
VP G IIG+GGE I++IQ ++G KI+++ + P
Sbjct: 84 VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIP 121
>sp|Q91WJ8|FUBP1_MOUSE Far upstream element-binding protein 1 OS=Mus musculus GN=Fubp1
PE=1 SV=1
Length = 651
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 7 FIRADGVCQI--KILVPSYAAGAIIGKGGETIAQIQKDTGSKIKM 49
F DG +I++P+ AG +IGKGGETI Q+Q+ G K+ M
Sbjct: 173 FHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVM 217
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 28/41 (68%)
Query: 12 GVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKA 52
G+ + +VP+ G IIGKGGETI I + +G++I++ ++
Sbjct: 371 GLQEFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRS 411
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 9 RADGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
R G I + +P +A G +IG+ GE I +IQ D G +I+ + P
Sbjct: 267 RIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTP 315
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 24/31 (77%)
Query: 20 VPSYAAGAIIGKGGETIAQIQKDTGSKIKMS 50
VP G IIG+GGE I++IQ+++G KI+++
Sbjct: 103 VPDGMVGFIIGRGGEQISRIQQESGCKIQIA 133
>sp|Q96AE4|FUBP1_HUMAN Far upstream element-binding protein 1 OS=Homo sapiens GN=FUBP1
PE=1 SV=3
Length = 644
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 7 FIRADGVCQI--KILVPSYAAGAIIGKGGETIAQIQKDTGSKIKM 49
F DG +I++P+ AG +IGKGGETI Q+Q+ G K+ M
Sbjct: 177 FHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVM 221
Score = 37.4 bits (85), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 27/40 (67%)
Query: 12 GVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSK 51
G+ + +VP+ G IIGKGGETI I + +G++I++ +
Sbjct: 375 GLQEFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQR 414
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 9 RADGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
R G I + +P +A G +IG+ GE I +IQ D G +I+ + P
Sbjct: 271 RIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTP 319
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 24/31 (77%)
Query: 20 VPSYAAGAIIGKGGETIAQIQKDTGSKIKMS 50
VP G IIG+GGE I++IQ+++G KI+++
Sbjct: 107 VPDGMVGFIIGRGGEQISRIQQESGCKIQIA 137
>sp|O73932|IF23A_XENLA Insulin-like growth factor 2 mRNA-binding protein 3-A OS=Xenopus
laevis GN=igf2bp3-a PE=1 SV=1
Length = 594
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 25/33 (75%)
Query: 15 QIKILVPSYAAGAIIGKGGETIAQIQKDTGSKI 47
+ I VPSYAAG +IGKGG+T+ ++Q T +++
Sbjct: 502 ETHIKVPSYAAGRVIGKGGKTVNELQNLTSAEV 534
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYPVYQVITLF 65
+++LVP+ GAIIGK G TI I K T SKI + + + + IT+
Sbjct: 208 LRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIH 257
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 6 PFIRADGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKA 52
PF + + + +P+ A GAIIGK G+ I Q+ + G+ IK++ A
Sbjct: 411 PFGQQPESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPA 457
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDF 55
+KIL + G +IGK G + +I++DT +KI +S D
Sbjct: 289 LKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQDL 328
>sp|Q32PX7|FUBP1_RAT Far upstream element-binding protein 1 OS=Rattus norvegicus
GN=Fubp1 PE=1 SV=1
Length = 639
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 7 FIRADGVCQI--KILVPSYAAGAIIGKGGETIAQIQKDTGSKIKM 49
F DG +I++P+ AG +IGKGGETI Q+Q+ G K+ M
Sbjct: 172 FHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVM 216
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 27/40 (67%)
Query: 12 GVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSK 51
G+ + +VP+ G IIGKGGETI I + +G++I++ +
Sbjct: 370 GLQEFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQR 409
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%)
Query: 9 RADGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
R G I + +P +A G +IG+ GE I +IQ D G +I+ + P
Sbjct: 266 RIGGNEGIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTP 314
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 24/31 (77%)
Query: 20 VPSYAAGAIIGKGGETIAQIQKDTGSKIKMS 50
VP G IIG+GGE I++IQ+++G KI+++
Sbjct: 102 VPDGMVGFIIGRGGEQISRIQQESGCKIQIA 132
>sp|O57526|IF23B_XENLA Insulin-like growth factor 2 mRNA-binding protein 3-B OS=Xenopus
laevis GN=igf2bp3-b PE=1 SV=1
Length = 593
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 25/33 (75%)
Query: 15 QIKILVPSYAAGAIIGKGGETIAQIQKDTGSKI 47
+ I VPSYAAG +IGKGG+T+ ++Q T +++
Sbjct: 501 EAHIKVPSYAAGRVIGKGGKTVNELQNLTSAEV 533
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYPVYQVITLF 65
+++LVP+ GAIIGK G TI I K T SKI + + + + IT+
Sbjct: 207 LRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIH 256
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 6 PFIRADGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKA 52
PF + + + +P+ A GAIIGK G+ I Q+ + G+ IK++ A
Sbjct: 410 PFGQQPESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPA 456
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDF 55
+KIL + G +IGK G + +I++DT +KI +S D
Sbjct: 288 LKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQDL 327
>sp|Q5ZLP8|IF2B3_CHICK Insulin-like growth factor 2 mRNA-binding protein 3 OS=Gallus
gallus GN=IGF2BP3 PE=2 SV=1
Length = 584
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 25/33 (75%)
Query: 15 QIKILVPSYAAGAIIGKGGETIAQIQKDTGSKI 47
+ I VPSYAAG +IGKGG+T+ ++Q T +++
Sbjct: 493 EAHIKVPSYAAGRVIGKGGKTVNELQNLTSAEV 525
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYPVYQVITLF 65
+++LVP+ GAIIGK G TI I K T SKI + + + + IT+
Sbjct: 199 LRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIH 248
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKA 52
+ + +P+ A GAIIGK G+ I Q+ + G+ IK++ A
Sbjct: 412 VHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPA 448
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDF 55
+KIL + G +IGK G + +I++DT +KI +S D
Sbjct: 280 LKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQDL 319
>sp|Q9CPN8|IF2B3_MOUSE Insulin-like growth factor 2 mRNA-binding protein 3 OS=Mus musculus
GN=Igf2bp3 PE=1 SV=1
Length = 579
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYPVYQVITLF 65
+++LVP+ GAIIGK G TI I K T SKI + + + + IT+
Sbjct: 198 LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENTGAAEKSITIL 247
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 25/33 (75%)
Query: 15 QIKILVPSYAAGAIIGKGGETIAQIQKDTGSKI 47
+ I VPS+AAG +IGKGG+T+ ++Q + +++
Sbjct: 489 EAHIRVPSFAAGRVIGKGGKTVNELQSLSSAEV 521
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 25/38 (65%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKAN 53
+ + +P+ + GAIIGK G+ I Q+ + G+ IK++ A
Sbjct: 408 VHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAE 445
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 23/35 (65%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMS 50
+KIL + G +IGK G + +I++DT +KI +S
Sbjct: 279 LKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITIS 313
>sp|O00425|IF2B3_HUMAN Insulin-like growth factor 2 mRNA-binding protein 3 OS=Homo sapiens
GN=IGF2BP3 PE=1 SV=2
Length = 579
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYPVYQVITLF 65
+++LVP+ GAIIGK G TI I K T SKI + + + + IT+
Sbjct: 198 LRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITIL 247
Score = 35.8 bits (81), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 25/33 (75%)
Query: 15 QIKILVPSYAAGAIIGKGGETIAQIQKDTGSKI 47
+ I VPS+AAG +IGKGG+T+ ++Q + +++
Sbjct: 489 EAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEV 521
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 25/37 (67%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKA 52
+ + +P+ + GAIIGK G+ I Q+ + G+ IK++ A
Sbjct: 408 VHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPA 444
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 23/35 (65%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMS 50
+KIL + G +IGK G + +I++DT +KI +S
Sbjct: 279 LKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITIS 313
>sp|Q9PW80|IF2B3_DANRE Insulin-like growth factor 2 mRNA-binding protein 3 OS=Danio rerio
GN=igf2bp3 PE=1 SV=1
Length = 582
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYPVYQVITLF 65
+++LVP+ GAIIGK G TI I K T SKI + + + + IT+
Sbjct: 197 LRLLVPTQFVGAIIGKEGATIRNITKQTHSKIDIHRKENAGAAEKPITVH 246
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 25/33 (75%)
Query: 15 QIKILVPSYAAGAIIGKGGETIAQIQKDTGSKI 47
+ I VPS+AAG +IGKGG+T+ ++Q T +++
Sbjct: 492 EAHIKVPSFAAGRVIGKGGKTVNELQNLTSAEV 524
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 26/38 (68%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKAN 53
+ + +P+ A GAIIGK G+ I Q+ + G+ IK++ A+
Sbjct: 411 VHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAD 448
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDF 55
+KIL + G +IGK G + +I++DT +KI +S D
Sbjct: 278 LKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQDL 317
>sp|O42254|IF2B1_CHICK Insulin-like growth factor 2 mRNA-binding protein 1 OS=Gallus
gallus GN=IGF2BP1 PE=1 SV=1
Length = 576
Score = 37.4 bits (85), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYPVYQVITLF 65
+++LVP+ GAIIGK G TI I K T SKI + + + + I++
Sbjct: 198 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISIH 247
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 24/33 (72%)
Query: 15 QIKILVPSYAAGAIIGKGGETIAQIQKDTGSKI 47
+ I VP+ AAG +IGKGG+T+ ++Q T +++
Sbjct: 488 ETHIRVPASAAGRVIGKGGKTVNELQNLTAAEV 520
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 24/40 (60%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDF 55
+KIL + G +IGK G + ++++DT +KI +S D
Sbjct: 279 LKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDL 318
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 23/35 (65%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMS 50
+ + +P+ A GAIIGK G+ I Q+ + + IK++
Sbjct: 407 VHVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIA 441
>sp|Q99PF5|FUBP2_RAT Far upstream element-binding protein 2 OS=Rattus norvegicus
GN=Khsrp PE=1 SV=1
Length = 721
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Query: 11 DGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKI 47
+G Q +I++P+ AG +IGKGGETI Q+Q+ G K+
Sbjct: 233 NGTVQ-EIMIPAGKAGLVIGKGGETIKQLQERAGVKM 268
Score = 35.8 bits (81), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 20 VPSYAAGAIIGKGGETIAQIQKDTGSKIKMS 50
VP G IIG+GGE I +IQ+D+G K+++S
Sbjct: 152 VPDGMVGLIIGRGGEQINKIQQDSGCKVQIS 182
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 25/42 (59%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
I + VP ++ G +IG+ GE I +IQ D G +I+ + + P
Sbjct: 326 IDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGP 367
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 25/37 (67%)
Query: 15 QIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSK 51
++ +P++ G +IG+GGE + I + TG+ +++S+
Sbjct: 427 EMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISR 463
>sp|Q92945|FUBP2_HUMAN Far upstream element-binding protein 2 OS=Homo sapiens GN=KHSRP
PE=1 SV=4
Length = 711
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Query: 11 DGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKI 47
+G Q +I++P+ AG +IGKGGETI Q+Q+ G K+
Sbjct: 232 NGTVQ-EIMIPAGKAGLVIGKGGETIKQLQERAGVKM 267
Score = 35.8 bits (81), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 20 VPSYAAGAIIGKGGETIAQIQKDTGSKIKMS 50
VP G IIG+GGE I +IQ+D+G K+++S
Sbjct: 151 VPDGMVGLIIGRGGEQINKIQQDSGCKVQIS 181
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 25/42 (59%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
I + VP ++ G +IG+ GE I +IQ D G +I+ + + P
Sbjct: 325 IDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGP 366
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 25/37 (67%)
Query: 15 QIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSK 51
++ +P++ G +IG+GGE + I + TG+ +++S+
Sbjct: 426 EMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISR 462
>sp|Q8UVD9|FUBP2_CHICK Far upstream element-binding protein 2 OS=Gallus gallus GN=KHSRP
PE=1 SV=1
Length = 769
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Query: 11 DGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKI 47
+G Q +I++P+ AG +IGKGGETI Q+Q+ G K+
Sbjct: 295 NGTVQ-EIMIPAGKAGLVIGKGGETIKQLQERAGVKM 330
Score = 35.8 bits (81), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 20 VPSYAAGAIIGKGGETIAQIQKDTGSKIKMS 50
VP G IIG+GGE I +IQ+D+G K+++S
Sbjct: 215 VPDGMVGLIIGRGGEQINKIQQDSGCKVQIS 245
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 25/42 (59%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
I + VP ++ G +IG+ GE I +IQ D G +I+ + + P
Sbjct: 388 IDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGP 429
Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 10/37 (27%), Positives = 24/37 (64%)
Query: 15 QIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSK 51
++ +P++ G +IG+GGE + I + G+ +++S+
Sbjct: 488 EMTFSIPTHKCGLVIGRGGENVKAINQQRGAFVEISR 524
>sp|Q3U0V1|FUBP2_MOUSE Far upstream element-binding protein 2 OS=Mus musculus GN=Khsrp
PE=1 SV=2
Length = 748
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 17 KILVPSYAAGAIIGKGGETIAQIQKDTGSKI 47
+I++P+ AG +IGKGGETI Q+Q+ G K+
Sbjct: 238 EIMIPAGKAGLVIGKGGETIKQLQERAGVKM 268
Score = 35.8 bits (81), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 20 VPSYAAGAIIGKGGETIAQIQKDTGSKIKMS 50
VP G IIG+GGE I +IQ+D+G K+++S
Sbjct: 152 VPDGMVGLIIGRGGEQINKIQQDSGCKVQIS 182
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 25/42 (59%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
I + VP ++ G +IG+ GE I +IQ D G +I+ + + P
Sbjct: 326 IDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGP 367
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 11/37 (29%), Positives = 25/37 (67%)
Query: 15 QIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSK 51
++ +P++ G +IG+GGE + I + TG+ +++S+
Sbjct: 427 EMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEISR 463
>sp|O88477|IF2B1_MOUSE Insulin-like growth factor 2 mRNA-binding protein 1 OS=Mus musculus
GN=Igf2bp1 PE=1 SV=1
Length = 577
Score = 36.6 bits (83), Expect = 0.043, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKAND 54
+++LVP+ GAIIGK G TI I K T SKI + + +
Sbjct: 198 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKEN 236
Score = 35.8 bits (81), Expect = 0.086, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 29/46 (63%)
Query: 5 SPFIRADGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMS 50
S F++A +++ +P+ A GAIIGK G+ I Q+ + + IK++
Sbjct: 397 SSFMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIA 442
Score = 33.9 bits (76), Expect = 0.28, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 24/33 (72%)
Query: 15 QIKILVPSYAAGAIIGKGGETIAQIQKDTGSKI 47
+ I VP+ AAG +IGKGG+T+ ++Q T +++
Sbjct: 489 ETHIRVPASAAGRVIGKGGKTVNELQNLTAAEV 521
Score = 30.8 bits (68), Expect = 2.3, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 24/40 (60%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDF 55
+KIL + G +IGK G + ++++DT +KI +S D
Sbjct: 279 LKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDL 318
>sp|Q9NZI8|IF2B1_HUMAN Insulin-like growth factor 2 mRNA-binding protein 1 OS=Homo sapiens
GN=IGF2BP1 PE=1 SV=2
Length = 577
Score = 36.6 bits (83), Expect = 0.043, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKAND 54
+++LVP+ GAIIGK G TI I K T SKI + + +
Sbjct: 198 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKEN 236
Score = 35.8 bits (81), Expect = 0.086, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 29/46 (63%)
Query: 5 SPFIRADGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMS 50
S F++A +++ +P+ A GAIIGK G+ I Q+ + + IK++
Sbjct: 397 SSFMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIA 442
Score = 33.9 bits (76), Expect = 0.28, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 24/33 (72%)
Query: 15 QIKILVPSYAAGAIIGKGGETIAQIQKDTGSKI 47
+ I VP+ AAG +IGKGG+T+ ++Q T +++
Sbjct: 489 ETHIRVPASAAGRVIGKGGKTVNELQNLTAAEV 521
Score = 30.8 bits (68), Expect = 2.3, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 24/40 (60%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDF 55
+KIL + G +IGK G + ++++DT +KI +S D
Sbjct: 279 LKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDL 318
>sp|Q8CGX0|IF2B1_RAT Insulin-like growth factor 2 mRNA-binding protein 1 OS=Rattus
norvegicus GN=Igf2bp1 PE=1 SV=1
Length = 577
Score = 36.6 bits (83), Expect = 0.044, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKAND 54
+++LVP+ GAIIGK G TI I K T SKI + + +
Sbjct: 198 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKEN 236
Score = 34.3 bits (77), Expect = 0.20, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 28/44 (63%)
Query: 7 FIRADGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMS 50
F++A +++ +P+ A GAIIGK G+ I Q+ + + IK++
Sbjct: 399 FMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIA 442
Score = 33.9 bits (76), Expect = 0.28, Method: Composition-based stats.
Identities = 14/33 (42%), Positives = 24/33 (72%)
Query: 15 QIKILVPSYAAGAIIGKGGETIAQIQKDTGSKI 47
+ I VP+ AAG +IGKGG+T+ ++Q T +++
Sbjct: 489 ETHIRVPASAAGRVIGKGGKTVNELQNLTAAEV 521
Score = 30.8 bits (68), Expect = 2.3, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 24/40 (60%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDF 55
+KIL + G +IGK G + ++++DT +KI +S D
Sbjct: 279 LKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDL 318
>sp|Q5R5H8|HNRPK_PONAB Heterogeneous nuclear ribonucleoprotein K OS=Pongo abelii GN=HNRNPK
PE=2 SV=1
Length = 464
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 27/39 (69%)
Query: 13 VCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSK 51
+ ++ +P AG+IIGKGG+ I QI+ ++G+ IK+ +
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDE 425
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Query: 1 MRLKSPFIRA---DGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKM 49
M + F R+ D + +++IL+ S AGA+IGKGG+ I ++ D + + +
Sbjct: 27 MEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSV 78
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 26/40 (65%)
Query: 10 ADGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKM 49
+D C++++L+ AG IIG G I +++++T + IK+
Sbjct: 141 SDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKL 180
>sp|Q4R4M6|HNRPK_MACFA Heterogeneous nuclear ribonucleoprotein K OS=Macaca fascicularis
GN=HNRNPK PE=2 SV=1
Length = 464
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 27/39 (69%)
Query: 13 VCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSK 51
+ ++ +P AG+IIGKGG+ I QI+ ++G+ IK+ +
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDE 425
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Query: 1 MRLKSPFIRA---DGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKM 49
M + F R+ D + +++IL+ S AGA+IGKGG+ I ++ D + + +
Sbjct: 27 MEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSV 78
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 26/40 (65%)
Query: 10 ADGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKM 49
+D C++++L+ AG IIG G I +++++T + IK+
Sbjct: 141 SDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKL 180
>sp|O19049|HNRPK_RABIT Heterogeneous nuclear ribonucleoprotein K OS=Oryctolagus cuniculus
GN=HNRNPK PE=2 SV=1
Length = 463
Score = 36.6 bits (83), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 27/39 (69%)
Query: 13 VCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSK 51
+ ++ +P AG+IIGKGG+ I QI+ ++G+ IK+ +
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDE 425
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Query: 1 MRLKSPFIRA---DGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKM 49
M + F R+ D + +++IL+ S AGA+IGKGG+ I ++ D + + +
Sbjct: 27 MEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSV 78
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 27/43 (62%)
Query: 7 FIRADGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKM 49
F +D C++++L+ AG IIG G I +++++T + IK+
Sbjct: 138 FKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKL 180
>sp|P61980|HNRPK_RAT Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus
GN=Hnrnpk PE=1 SV=1
Length = 463
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 27/39 (69%)
Query: 13 VCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSK 51
+ ++ +P AG+IIGKGG+ I QI+ ++G+ IK+ +
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDE 425
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Query: 1 MRLKSPFIRA---DGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKM 49
M + F R+ D + +++IL+ S AGA+IGKGG+ I ++ D + + +
Sbjct: 27 MEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSV 78
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 26/40 (65%)
Query: 10 ADGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKM 49
+D C++++L+ AG IIG G I +++++T + IK+
Sbjct: 141 SDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKL 180
>sp|P61979|HNRPK_MOUSE Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus GN=Hnrnpk
PE=1 SV=1
Length = 463
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 27/39 (69%)
Query: 13 VCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSK 51
+ ++ +P AG+IIGKGG+ I QI+ ++G+ IK+ +
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDE 425
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Query: 1 MRLKSPFIRA---DGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKM 49
M + F R+ D + +++IL+ S AGA+IGKGG+ I ++ D + + +
Sbjct: 27 MEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSV 78
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 26/40 (65%)
Query: 10 ADGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKM 49
+D C++++L+ AG IIG G I +++++T + IK+
Sbjct: 141 SDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKL 180
>sp|P61978|HNRPK_HUMAN Heterogeneous nuclear ribonucleoprotein K OS=Homo sapiens GN=HNRNPK
PE=1 SV=1
Length = 463
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 27/39 (69%)
Query: 13 VCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSK 51
+ ++ +P AG+IIGKGG+ I QI+ ++G+ IK+ +
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDE 425
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Query: 1 MRLKSPFIRA---DGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKM 49
M + F R+ D + +++IL+ S AGA+IGKGG+ I ++ D + + +
Sbjct: 27 MEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSV 78
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 26/40 (65%)
Query: 10 ADGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKM 49
+D C++++L+ AG IIG G I +++++T + IK+
Sbjct: 141 SDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKL 180
>sp|Q3T0D0|HNRPK_BOVIN Heterogeneous nuclear ribonucleoprotein K OS=Bos taurus GN=HNRNPK
PE=2 SV=1
Length = 464
Score = 36.6 bits (83), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 27/39 (69%)
Query: 13 VCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSK 51
+ ++ +P AG+IIGKGG+ I QI+ ++G+ IK+ +
Sbjct: 387 IITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDE 425
Score = 33.1 bits (74), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Query: 1 MRLKSPFIRA---DGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKM 49
M + F R+ D + +++IL+ S AGA+IGKGG+ I ++ D + + +
Sbjct: 27 MEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSV 78
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 26/40 (65%)
Query: 10 ADGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKM 49
+D C++++L+ AG IIG G I +++++T + IK+
Sbjct: 141 SDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKL 180
>sp|Q80VL1|TDRKH_MOUSE Tudor and KH domain-containing protein OS=Mus musculus GN=Tdrkh
PE=1 SV=1
Length = 560
Score = 36.6 bits (83), Expect = 0.051, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 25/38 (65%)
Query: 17 KILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKAND 54
++ VP + G IIG+GGETI I K +G+KI K ++
Sbjct: 128 QLSVPQRSVGRIIGRGGETIRSICKASGAKITCDKESE 165
Score = 32.3 bits (72), Expect = 0.81, Method: Composition-based stats.
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 7 FIRADGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKI 47
F+ D + +I++ VP A IIG+ G I Q++K TG++I
Sbjct: 47 FVGEDDI-EIEMRVPQEAVKLIIGRQGANIKQLRKQTGARI 86
>sp|Q5ZIQ3|HNRPK_CHICK Heterogeneous nuclear ribonucleoprotein K OS=Gallus gallus
GN=HNRNPK PE=2 SV=1
Length = 427
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 26/35 (74%)
Query: 17 KILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSK 51
++ +P AG+IIGKGG+ I QI+ ++G+ IK+ +
Sbjct: 355 QVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDE 389
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Query: 1 MRLKSPFIRA---DGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKI 47
M + F R+ D + +++IL+ S AGA+IGKGG+ I ++ D + +
Sbjct: 24 MEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASV 73
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 26/40 (65%)
Query: 10 ADGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKM 49
+D C++++L+ AG IIG G I +++++T + IK+
Sbjct: 114 SDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKL 153
>sp|B3EH06|PNP_CHLL2 Polyribonucleotide nucleotidyltransferase OS=Chlorobium limicola
(strain DSM 245 / NBRC 103803) GN=pnp PE=3 SV=1
Length = 736
Score = 36.2 bits (82), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 23/33 (69%)
Query: 18 ILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMS 50
I VP A G IIGKGGETI I ++TG++I +
Sbjct: 578 IQVPVDAIGLIIGKGGETIRSITEETGAEINIE 610
>sp|Q08CK7|IF2B1_DANRE Insulin-like growth factor 2 mRNA-binding protein 1 OS=Danio rerio
GN=igf2bp1 PE=1 SV=1
Length = 598
Score = 36.2 bits (82), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKAND 54
+++LVP+ GAIIGK G TI I K T SKI + + +
Sbjct: 201 LRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKEN 239
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 25/37 (67%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKA 52
+ + +P+ A GA+IGK G+ I Q+ + G+ IK++ A
Sbjct: 410 VHVYIPAQAVGALIGKKGQHIKQLSRFAGASIKIAPA 446
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 23/33 (69%)
Query: 15 QIKILVPSYAAGAIIGKGGETIAQIQKDTGSKI 47
+ I V + AAG +IGKGG+T+ ++Q T +++
Sbjct: 491 ETHIKVAAAAAGRVIGKGGKTVNELQNLTAAEV 523
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 24/40 (60%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDF 55
+K+L + G +IGK G + ++++DT +KI +S D
Sbjct: 282 LKVLAHNNFVGRLIGKEGRNLKKVEQDTDTKITISPLQDL 321
>sp|Q58928|Y1533_METJA Uncharacterized KH and PIN-domain containing protein MJ1533
OS=Methanocaldococcus jannaschii (strain ATCC 43067 /
DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ1533
PE=1 SV=1
Length = 642
Score = 36.2 bits (82), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%)
Query: 2 RLKSPFIRADGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKI 47
R P ++ G I ++VP GAIIGKGG+ I++++ G KI
Sbjct: 499 RKAKPMVKVTGDNSIDLIVPEKYIGAIIGKGGKEISKLEDMLGLKI 544
>sp|Q21920|ANKHM_CAEEL Ankyrin repeat and KH domain-containing protein R11A8.7
OS=Caenorhabditis elegans GN=R11A8.7 PE=2 SV=3
Length = 2620
Score = 36.2 bits (82), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 26/35 (74%)
Query: 17 KILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSK 51
K+ +P+YAA +IGKGG + +++ TG+ I+++K
Sbjct: 1811 KLTIPAYAASRVIGKGGSNVNAVREATGAIIEINK 1845
>sp|P57721|PCBP3_HUMAN Poly(rC)-binding protein 3 OS=Homo sapiens GN=PCBP3 PE=2 SV=2
Length = 371
Score = 36.2 bits (82), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 30/42 (71%), Gaps = 2/42 (4%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
++++VP+ G++IGKGG I +I++ TG+++++ A D P
Sbjct: 132 LRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLP 171
Score = 36.2 bits (82), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 29/38 (76%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKAN 53
I++L+ G+IIGK GET+ ++++++G++I +S+ N
Sbjct: 48 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN 85
Score = 28.9 bits (63), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 26/38 (68%)
Query: 17 KILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKAND 54
++ +P+ G IIG+ G I +I++ +G++IK++ A +
Sbjct: 297 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE 334
>sp|Q9Y2W6|TDRKH_HUMAN Tudor and KH domain-containing protein OS=Homo sapiens GN=TDRKH
PE=1 SV=2
Length = 561
Score = 36.2 bits (82), Expect = 0.058, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 25/38 (65%)
Query: 17 KILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKAND 54
++ VP + G IIG+GGETI I K +G+KI K ++
Sbjct: 128 QLSVPQRSVGRIIGRGGETIRSICKASGAKITCDKESE 165
Score = 32.3 bits (72), Expect = 0.89, Method: Composition-based stats.
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 7 FIRADGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKI 47
F+ D + +I++ VP A IIG+ G I Q++K TG++I
Sbjct: 47 FVGEDDI-EIEMRVPQEAVKLIIGRQGANIKQLRKQTGARI 86
>sp|P57722|PCBP3_MOUSE Poly(rC)-binding protein 3 OS=Mus musculus GN=Pcbp3 PE=2 SV=3
Length = 371
Score = 36.2 bits (82), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 30/42 (71%), Gaps = 2/42 (4%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
++++VP+ G++IGKGG I +I++ TG+++++ A D P
Sbjct: 132 LRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV--AGDMLP 171
Score = 35.8 bits (81), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 29/38 (76%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKAN 53
I++L+ G+IIGK GET+ ++++++G++I +S+ N
Sbjct: 48 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN 85
>sp|B3EMN6|PNP_CHLPB Polyribonucleotide nucleotidyltransferase OS=Chlorobium
phaeobacteroides (strain BS1) GN=pnp PE=3 SV=1
Length = 734
Score = 36.2 bits (82), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 23/32 (71%)
Query: 18 ILVPSYAAGAIIGKGGETIAQIQKDTGSKIKM 49
I VP A G IIGKGGETI I ++TG++I +
Sbjct: 575 IQVPVDAIGMIIGKGGETIRSITEETGAQINV 606
>sp|Q5SF07|IF2B2_MOUSE Insulin-like growth factor 2 mRNA-binding protein 2 OS=Mus musculus
GN=Igf2bp2 PE=1 SV=1
Length = 592
Score = 35.8 bits (81), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKAND 54
++ILVP+ GAIIGK G TI I K T S++ + + +
Sbjct: 189 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKEN 227
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 14 CQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKI 47
+ I VPS AG +IGKGG+T+ ++Q T +++
Sbjct: 503 LEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV 536
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKAN 53
+ + +P+ A GAIIGK G I Q+ + G+ IK++ A
Sbjct: 423 VSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAE 460
Score = 32.7 bits (73), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDF 55
+KIL + G +IGK G + +I+ +TG+KI +S D
Sbjct: 270 LKILAHNGFVGRLIGKEGRNLKKIEHETGTKITISSLQDL 309
>sp|Q9Y6M1|IF2B2_HUMAN Insulin-like growth factor 2 mRNA-binding protein 2 OS=Homo sapiens
GN=IGF2BP2 PE=1 SV=2
Length = 599
Score = 35.8 bits (81), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKAND 54
++ILVP+ GAIIGK G TI I K T S++ + + +
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKEN 234
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 14 CQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKI 47
+ I VPS AG +IGKGG+T+ ++Q T +++
Sbjct: 510 LEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV 543
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 24/37 (64%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKA 52
+ + +P+ A GAIIGK G I Q+ + G+ IK++ A
Sbjct: 430 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPA 466
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDF 55
+KIL + G +IGK G + +I+ +TG+KI +S D
Sbjct: 277 LKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL 316
>sp|O19048|PCBP1_RABIT Poly(rC)-binding protein 1 OS=Oryctolagus cuniculus GN=PCBP1 PE=2
SV=1
Length = 356
Score = 35.8 bits (81), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 29/38 (76%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKAN 53
I++L+ G+IIGK GE++ +I++++G++I +S+ N
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGN 53
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 30/42 (71%), Gaps = 2/42 (4%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
++++VP+ G++IGKGG I +I++ TG+++++ A D P
Sbjct: 100 LRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLP 139
>sp|P60335|PCBP1_MOUSE Poly(rC)-binding protein 1 OS=Mus musculus GN=Pcbp1 PE=1 SV=1
Length = 356
Score = 35.8 bits (81), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 29/38 (76%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKAN 53
I++L+ G+IIGK GE++ +I++++G++I +S+ N
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGN 53
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 30/42 (71%), Gaps = 2/42 (4%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
++++VP+ G++IGKGG I +I++ TG+++++ A D P
Sbjct: 100 LRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLP 139
>sp|Q15365|PCBP1_HUMAN Poly(rC)-binding protein 1 OS=Homo sapiens GN=PCBP1 PE=1 SV=2
Length = 356
Score = 35.8 bits (81), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 29/38 (76%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKAN 53
I++L+ G+IIGK GE++ +I++++G++I +S+ N
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGN 53
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 30/42 (71%), Gaps = 2/42 (4%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
++++VP+ G++IGKGG I +I++ TG+++++ A D P
Sbjct: 100 LRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLP 139
>sp|Q5E9A3|PCBP1_BOVIN Poly(rC)-binding protein 1 OS=Bos taurus GN=PCBP1 PE=2 SV=1
Length = 356
Score = 35.8 bits (81), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 29/38 (76%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKAN 53
I++L+ G+IIGK GE++ +I++++G++I +S+ N
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGN 53
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 30/42 (71%), Gaps = 2/42 (4%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
++++VP+ G++IGKGG I +I++ TG+++++ A D P
Sbjct: 100 LRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV--AGDMLP 139
>sp|Q5RB68|IF2B2_PONAB Insulin-like growth factor 2 mRNA-binding protein 2 OS=Pongo abelii
GN=IGF2BP2 PE=2 SV=1
Length = 556
Score = 35.8 bits (81), Expect = 0.089, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKAND 54
++ILVP+ GAIIGK G TI I K T S++ + + +
Sbjct: 196 LRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKEN 234
Score = 35.0 bits (79), Expect = 0.15, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 24/37 (64%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKA 52
+ + +P+ A GAIIGK G I Q+ + G+ IK++ A
Sbjct: 387 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPA 423
Score = 33.1 bits (74), Expect = 0.47, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 22/30 (73%)
Query: 18 ILVPSYAAGAIIGKGGETIAQIQKDTGSKI 47
I VPS AG +IGKGG+T+ ++Q T +++
Sbjct: 471 IRVPSSTAGRVIGKGGKTVNELQNLTSAEV 500
Score = 32.0 bits (71), Expect = 1.0, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDF 55
+KIL + G +IGK G + +I+ +TG+KI +S D
Sbjct: 277 LKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL 316
>sp|A1BDY1|PNP_CHLPD Polyribonucleotide nucleotidyltransferase OS=Chlorobium
phaeobacteroides (strain DSM 266) GN=pnp PE=3 SV=1
Length = 732
Score = 35.4 bits (80), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 23/33 (69%)
Query: 18 ILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMS 50
I +P A G IIGKGGETI I ++TG++I +
Sbjct: 575 IQIPVDAIGLIIGKGGETIRSITEETGAEINIE 607
>sp|Q3B2E2|PNP_PELLD Polyribonucleotide nucleotidyltransferase OS=Pelodictyon luteolum
(strain DSM 273) GN=pnp PE=3 SV=1
Length = 732
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 23/33 (69%)
Query: 18 ILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMS 50
I VP + G IIGKGGETI I ++TG++I +
Sbjct: 575 IQVPVESIGLIIGKGGETIRSITEETGAEINIE 607
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.138 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,388,095
Number of Sequences: 539616
Number of extensions: 951701
Number of successful extensions: 3422
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 209
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 3083
Number of HSP's gapped (non-prelim): 341
length of query: 78
length of database: 191,569,459
effective HSP length: 49
effective length of query: 29
effective length of database: 165,128,275
effective search space: 4788719975
effective search space used: 4788719975
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)