Your job contains 1 sequence.
>psy14680
MRLKSPFIRADGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYPVYQ
VITLFLLSRPGFEPSTSD
The BLAST search returned 7 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy14680
(78 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|F8VWX1 - symbol:NOVA1 "RNA-binding protein Nova... 178 1.0e-13 1
UNIPROTKB|F8VYI3 - symbol:NOVA1 "RNA-binding protein Nova... 174 2.7e-13 1
UNIPROTKB|F8W659 - symbol:NOVA1 "RNA-binding protein Nova... 174 2.7e-13 1
UNIPROTKB|I3L2B5 - symbol:NOVA1 "RNA-binding protein Nova... 174 2.7e-13 1
UNIPROTKB|D4A6P7 - symbol:Nova1 "RNA-binding protein Nova... 174 2.7e-13 1
UNIPROTKB|J3KQU3 - symbol:NOVA1 "RNA-binding protein Nova... 174 3.3e-13 1
UNIPROTKB|F1NP95 - symbol:NOVA1 "Uncharacterized protein"... 174 8.8e-13 1
RGD|621345 - symbol:Nova1 "neuro-oncological ventral anti... 174 1.9e-12 1
UNIPROTKB|F1LMZ7 - symbol:Nova1 "RNA-binding protein Nova... 174 1.9e-12 1
UNIPROTKB|D3DS81 - symbol:NOVA1 "Neuro-oncological ventra... 174 2.0e-12 1
UNIPROTKB|G3X7R5 - symbol:NOVA1 "Uncharacterized protein"... 174 2.2e-12 1
UNIPROTKB|J9NXS6 - symbol:NOVA1 "Uncharacterized protein"... 174 2.2e-12 1
MGI|MGI:104297 - symbol:Nova1 "neuro-oncological ventral ... 174 2.2e-12 1
UNIPROTKB|D4AAF8 - symbol:Nova1 "RNA-binding protein Nova... 174 2.2e-12 1
UNIPROTKB|F1PUD6 - symbol:NOVA2 "Uncharacterized protein"... 171 4.5e-12 1
UNIPROTKB|F1MS84 - symbol:NOVA2 "Uncharacterized protein"... 170 5.0e-12 1
ZFIN|ZDB-GENE-080211-1 - symbol:nova2 "neuro-oncological ... 170 5.2e-12 1
UNIPROTKB|Q9UNW9 - symbol:NOVA2 "RNA-binding protein Nova... 170 5.6e-12 1
ZFIN|ZDB-GENE-060526-113 - symbol:nova1 "neuro-oncologica... 170 5.6e-12 1
RGD|1308032 - symbol:Nova2 "neuro-oncological ventral ant... 170 6.1e-12 1
FB|FBgn0261552 - symbol:ps "pasilla" species:7227 "Drosop... 171 6.3e-12 1
UNIPROTKB|F1RM28 - symbol:NOVA2 "Uncharacterized protein"... 170 6.9e-12 1
UNIPROTKB|P51513 - symbol:NOVA1 "RNA-binding protein Nova... 161 5.6e-11 1
WB|WBGene00013347 - symbol:Y59A8B.10 species:6239 "Caenor... 120 1.1e-06 1
UNIPROTKB|Q9GRY9 - symbol:Y59A8B.10 "Protein Y59A8B.10, i... 120 1.1e-06 1
TAIR|locus:2184362 - symbol:BTR1L "AT5G04430" species:370... 111 7.0e-06 1
UNIPROTKB|G8JLA5 - symbol:NOVA1 "RNA-binding protein Nova... 103 9.0e-06 1
UNIPROTKB|G3N2N4 - symbol:NOVA1 "Uncharacterized protein"... 107 2.4e-05 1
UNIPROTKB|B7Z770 - symbol:NOVA1 "RNA-binding protein Nova... 107 2.4e-05 1
UNIPROTKB|F1MBI6 - symbol:NOVA1 "Uncharacterized protein"... 107 2.5e-05 1
UNIPROTKB|F1NP94 - symbol:NOVA1 "Uncharacterized protein"... 107 2.7e-05 1
UNIPROTKB|F1SGT5 - symbol:NOVA1 "Uncharacterized protein"... 107 2.7e-05 1
UNIPROTKB|F8VW64 - symbol:NOVA1 "RNA-binding protein Nova... 97 3.9e-05 1
UNIPROTKB|J9P1I9 - symbol:FUBP3 "Uncharacterized protein"... 96 0.00053 1
TAIR|locus:2043530 - symbol:AT2G25970 "AT2G25970" species... 97 0.00058 1
UNIPROTKB|F1PEW1 - symbol:FUBP3 "Uncharacterized protein"... 96 0.00062 1
UNIPROTKB|F1NYJ3 - symbol:FUBP3 "Uncharacterized protein"... 95 0.00072 1
UNIPROTKB|F1NGC0 - symbol:FUBP3 "Uncharacterized protein"... 95 0.00078 1
UNIPROTKB|F1S0X8 - symbol:FUBP3 "Uncharacterized protein"... 95 0.00079 1
POMBASE|SPCC757.09c - symbol:rnc1 "RNA-binding protein th... 93 0.00084 1
FB|FBgn0262735 - symbol:Imp "IGF-II mRNA-binding protein"... 95 0.00087 1
>UNIPROTKB|F8VWX1 [details] [associations]
symbol:NOVA1 "RNA-binding protein Nova-1" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0003723 HGNC:HGNC:7886 ChiTaRS:NOVA1
EMBL:AL079343 EMBL:AL132716 IPI:IPI01020747
ProteinModelPortal:F8VWX1 SMR:F8VWX1 Ensembl:ENST00000549571
ArrayExpress:F8VWX1 Bgee:F8VWX1 Uniprot:F8VWX1
Length = 173
Score = 178 (67.7 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 32/49 (65%), Positives = 42/49 (85%)
Query: 9 RADGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
R DG +K+L+PSYAAG+IIGKGG+TI Q+QK+TG+ IK+SK+ DFYP
Sbjct: 8 REDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP 56
Score = 94 (38.1 bits), Expect = 0.00011, P = 0.00011
Identities = 16/37 (43%), Positives = 28/37 (75%)
Query: 15 QIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSK 51
Q+KI+VP+ AG IIGKGG T+ + + +G+ +++S+
Sbjct: 136 QVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQ 172
>UNIPROTKB|F8VYI3 [details] [associations]
symbol:NOVA1 "RNA-binding protein Nova-1" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0003723 HGNC:HGNC:7886 ChiTaRS:NOVA1
EMBL:AL079343 EMBL:AL132716 IPI:IPI01017995
ProteinModelPortal:F8VYI3 SMR:F8VYI3 PRIDE:F8VYI3
Ensembl:ENST00000483536 ArrayExpress:F8VYI3 Bgee:F8VYI3
Uniprot:F8VYI3
Length = 121
Score = 174 (66.3 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 31/47 (65%), Positives = 41/47 (87%)
Query: 11 DGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
DG +K+L+PSYAAG+IIGKGG+TI Q+QK+TG+ IK+SK+ DFYP
Sbjct: 47 DGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP 93
>UNIPROTKB|F8W659 [details] [associations]
symbol:NOVA1 "RNA-binding protein Nova-1" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0003723 HGNC:HGNC:7886 ChiTaRS:NOVA1
EMBL:AL079343 EMBL:AL132716 IPI:IPI01021871
ProteinModelPortal:F8W659 SMR:F8W659 Ensembl:ENST00000547619
ArrayExpress:F8W659 Bgee:F8W659 Uniprot:F8W659
Length = 211
Score = 174 (66.3 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 31/47 (65%), Positives = 41/47 (87%)
Query: 11 DGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
DG +K+L+PSYAAG+IIGKGG+TI Q+QK+TG+ IK+SK+ DFYP
Sbjct: 47 DGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP 93
>UNIPROTKB|I3L2B5 [details] [associations]
symbol:NOVA1 "RNA-binding protein Nova-1" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0003723 HGNC:HGNC:7886 ChiTaRS:NOVA1
EMBL:AL079343 EMBL:AL132716 ProteinModelPortal:I3L2B5 SMR:I3L2B5
Ensembl:ENST00000574031 Bgee:I3L2B5 Uniprot:I3L2B5
Length = 152
Score = 174 (66.3 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 31/47 (65%), Positives = 41/47 (87%)
Query: 11 DGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
DG +K+L+PSYAAG+IIGKGG+TI Q+QK+TG+ IK+SK+ DFYP
Sbjct: 47 DGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP 93
>UNIPROTKB|D4A6P7 [details] [associations]
symbol:Nova1 "RNA-binding protein Nova-1" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 RGD:621345 GO:GO:0003723 IPI:IPI00951323
Ensembl:ENSRNOT00000066327 ArrayExpress:D4A6P7 Uniprot:D4A6P7
Length = 155
Score = 174 (66.3 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 31/47 (65%), Positives = 41/47 (87%)
Query: 11 DGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
DG +K+L+PSYAAG+IIGKGG+TI Q+QK+TG+ IK+SK+ DFYP
Sbjct: 46 DGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP 92
>UNIPROTKB|J3KQU3 [details] [associations]
symbol:NOVA1 "RNA-binding protein Nova-1" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0003723 HGNC:HGNC:7886 ChiTaRS:NOVA1
EMBL:AL079343 EMBL:AL132716 Ensembl:ENST00000449198 Uniprot:J3KQU3
Length = 277
Score = 174 (66.3 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 31/47 (65%), Positives = 41/47 (87%)
Query: 11 DGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
DG +K+L+PSYAAG+IIGKGG+TI Q+QK+TG+ IK+SK+ DFYP
Sbjct: 6 DGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP 52
Score = 97 (39.2 bits), Expect = 0.00017, P = 0.00017
Identities = 17/40 (42%), Positives = 29/40 (72%)
Query: 15 QIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKAND 54
Q+KI+VP+ AG IIGKGG T+ + + +G+ +++S+ D
Sbjct: 132 QVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPD 171
>UNIPROTKB|F1NP95 [details] [associations]
symbol:NOVA1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0003723 GeneTree:ENSGT00650000093048 EMBL:AADN02003296
EMBL:AADN02003297 EMBL:AADN02003298 EMBL:AADN02003299
EMBL:AADN02003300 EMBL:AADN02003301 EMBL:AADN02003302
EMBL:AADN02003303 EMBL:AADN02003304 EMBL:AADN02003305
EMBL:AADN02003306 EMBL:AADN02003307 EMBL:AADN02003308
EMBL:AADN02003309 EMBL:AADN02003310 EMBL:AADN02003311
EMBL:AADN02003312 EMBL:AADN02003313 EMBL:AADN02003314
EMBL:AADN02003315 IPI:IPI00814536 Ensembl:ENSGALT00000016012
ArrayExpress:F1NP95 Uniprot:F1NP95
Length = 345
Score = 174 (66.3 bits), Expect = 8.8e-13, P = 8.8e-13
Identities = 31/47 (65%), Positives = 41/47 (87%)
Query: 11 DGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
DG +K+L+PSYAAG+IIGKGG+TI Q+QK+TG+ IK+SK+ DFYP
Sbjct: 30 DGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP 76
Score = 104 (41.7 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 8 IRADGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKAND 54
+ D + Q+KI+VP+ AG IIGKGG T+ I + +G+ +++S+ D
Sbjct: 125 VNPDRIKQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPD 171
>RGD|621345 [details] [associations]
symbol:Nova1 "neuro-oncological ventral antigen 1" species:10116
"Rattus norvegicus" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISO] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003729
"mRNA binding" evidence=ISO] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007399 "nervous system development" evidence=IDA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 RGD:621345 GO:GO:0005634 GO:GO:0007399 GO:GO:0003723
eggNOG:NOG258094 HOGENOM:HOG000007833 HOVERGEN:HBG082048
EMBL:AY262017 IPI:IPI00331877 UniGene:Rn.232418
ProteinModelPortal:Q80WA4 SMR:Q80WA4 PRIDE:Q80WA4 UCSC:RGD:621345
ArrayExpress:Q80WA4 Genevestigator:Q80WA4 Uniprot:Q80WA4
Length = 474
Score = 174 (66.3 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 31/47 (65%), Positives = 41/47 (87%)
Query: 11 DGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
DG +K+L+PSYAAG+IIGKGG+TI Q+QK+TG+ IK+SK+ DFYP
Sbjct: 46 DGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP 92
Score = 107 (42.7 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 19/42 (45%), Positives = 31/42 (73%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
++I VP GAI+GKGG+T+ + Q+ TG++I++SK +F P
Sbjct: 399 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVP 440
Score = 104 (41.7 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 8 IRADGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKAND 54
+ D + Q+KI+VP+ AG IIGKGG T+ I + +G+ +++S+ D
Sbjct: 141 VNPDRIKQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPD 187
>UNIPROTKB|F1LMZ7 [details] [associations]
symbol:Nova1 "RNA-binding protein Nova-1" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 RGD:621345 GO:GO:0003723 IPI:IPI00331877
Ensembl:ENSRNOT00000044527 ArrayExpress:F1LMZ7 Uniprot:F1LMZ7
Length = 474
Score = 174 (66.3 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 31/47 (65%), Positives = 41/47 (87%)
Query: 11 DGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
DG +K+L+PSYAAG+IIGKGG+TI Q+QK+TG+ IK+SK+ DFYP
Sbjct: 46 DGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP 92
Score = 107 (42.7 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 19/42 (45%), Positives = 31/42 (73%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
++I VP GAI+GKGG+T+ + Q+ TG++I++SK +F P
Sbjct: 399 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVP 440
Score = 104 (41.7 bits), Expect = 7.0e-05, P = 7.0e-05
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 8 IRADGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKAND 54
+ D + Q+KI+VP+ AG IIGKGG T+ I + +G+ +++S+ D
Sbjct: 141 VNPDRIKQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPD 187
>UNIPROTKB|D3DS81 [details] [associations]
symbol:NOVA1 "Neuro-oncological ventral antigen 1, isoform
CRA_a" species:9606 "Homo sapiens" [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 GO:GO:0003723 EMBL:CH471078
RefSeq:NP_006480.2 UniGene:Hs.31588 GeneID:4857 KEGG:hsa:4857
CTD:4857 HGNC:HGNC:7886 HOGENOM:HOG000007833 KO:K14944
ChiTaRS:NOVA1 GenomeRNAi:4857 NextBio:18710 EMBL:AL079343
EMBL:AL132716 IPI:IPI00956017 SMR:D3DS81 Ensembl:ENST00000465357
UCSC:uc001wpz.3 Uniprot:D3DS81
Length = 483
Score = 174 (66.3 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 31/47 (65%), Positives = 41/47 (87%)
Query: 11 DGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
DG +K+L+PSYAAG+IIGKGG+TI Q+QK+TG+ IK+SK+ DFYP
Sbjct: 47 DGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP 93
Score = 107 (42.7 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 19/42 (45%), Positives = 31/42 (73%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
++I VP GAI+GKGG+T+ + Q+ TG++I++SK +F P
Sbjct: 400 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVP 441
Score = 103 (41.3 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 18/47 (38%), Positives = 32/47 (68%)
Query: 8 IRADGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKAND 54
+ D + Q+KI+VP+ AG IIGKGG T+ + + +G+ +++S+ D
Sbjct: 142 VNPDRIKQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPD 188
>UNIPROTKB|G3X7R5 [details] [associations]
symbol:NOVA1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003729 "mRNA binding" evidence=IEA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0003729 GO:GO:0000398 GeneTree:ENSGT00650000093048
OMA:FRQNNTA EMBL:DAAA02052552 EMBL:DAAA02052553
Ensembl:ENSBTAT00000044049 Uniprot:G3X7R5
Length = 507
Score = 174 (66.3 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 31/47 (65%), Positives = 41/47 (87%)
Query: 11 DGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
DG +K+L+PSYAAG+IIGKGG+TI Q+QK+TG+ IK+SK+ DFYP
Sbjct: 47 DGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP 93
Score = 107 (42.7 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 19/42 (45%), Positives = 31/42 (73%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
++I VP GAI+GKGG+T+ + Q+ TG++I++SK +F P
Sbjct: 424 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVP 465
Score = 98 (39.6 bits), Expect = 0.00034, P = 0.00034
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 15 QIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKAND 54
Q+KI+VP+ AG IIGKGG T+ I + +G+ +++S+ D
Sbjct: 173 QVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPD 212
>UNIPROTKB|J9NXS6 [details] [associations]
symbol:NOVA1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0003723 GeneTree:ENSGT00650000093048 CTD:4857
KO:K14944 OMA:FRQNNTA EMBL:AAEX03005630 EMBL:AAEX03005631
RefSeq:XP_547754.1 Ensembl:ENSCAFT00000044255 GeneID:490632
KEGG:cfa:490632 Uniprot:J9NXS6
Length = 507
Score = 174 (66.3 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 31/47 (65%), Positives = 41/47 (87%)
Query: 11 DGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
DG +K+L+PSYAAG+IIGKGG+TI Q+QK+TG+ IK+SK+ DFYP
Sbjct: 47 DGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP 93
Score = 107 (42.7 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 19/42 (45%), Positives = 31/42 (73%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
++I VP GAI+GKGG+T+ + Q+ TG++I++SK +F P
Sbjct: 424 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVP 465
Score = 98 (39.6 bits), Expect = 0.00034, P = 0.00034
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 15 QIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKAND 54
Q+KI+VP+ AG IIGKGG T+ I + +G+ +++S+ D
Sbjct: 173 QVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPD 212
>MGI|MGI:104297 [details] [associations]
symbol:Nova1 "neuro-oncological ventral antigen 1"
species:10090 "Mus musculus" [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IMP;IDA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IC]
[GO:0007399 "nervous system development" evidence=ISO]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 MGI:MGI:104297 GO:GO:0005634 GO:GO:0003729
GO:GO:0000398 GeneTree:ENSGT00650000093048 CTD:4857
eggNOG:NOG258094 HOGENOM:HOG000007833 HOVERGEN:HBG082048 KO:K14944
OMA:FRQNNTA ChiTaRS:NOVA1 EMBL:AC108802 EMBL:AC156636 EMBL:AF232828
EMBL:AK047565 IPI:IPI00659424 RefSeq:NP_067336.1 UniGene:Mm.247195
ProteinModelPortal:Q9JKN6 SMR:Q9JKN6 PhosphoSite:Q9JKN6
PaxDb:Q9JKN6 PRIDE:Q9JKN6 Ensembl:ENSMUST00000021438 GeneID:664883
KEGG:mmu:664883 UCSC:uc007nmd.2 InParanoid:Q9JKN6 NextBio:426120
Bgee:Q9JKN6 CleanEx:MM_NOVA1 Genevestigator:Q9JKN6
GermOnline:ENSMUSG00000021047 Uniprot:Q9JKN6
Length = 507
Score = 174 (66.3 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 31/47 (65%), Positives = 41/47 (87%)
Query: 11 DGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
DG +K+L+PSYAAG+IIGKGG+TI Q+QK+TG+ IK+SK+ DFYP
Sbjct: 47 DGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP 93
Score = 107 (42.7 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 19/42 (45%), Positives = 31/42 (73%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
++I VP GAI+GKGG+T+ + Q+ TG++I++SK +F P
Sbjct: 424 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVP 465
Score = 98 (39.6 bits), Expect = 0.00034, P = 0.00034
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 15 QIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKAND 54
Q+KI+VP+ AG IIGKGG T+ I + +G+ +++S+ D
Sbjct: 173 QVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPD 212
>UNIPROTKB|D4AAF8 [details] [associations]
symbol:Nova1 "RNA-binding protein Nova-1" species:10116
"Rattus norvegicus" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 RGD:621345 GO:GO:0003729 GO:GO:0000398 EMBL:CH473947
GeneTree:ENSGT00650000093048 CTD:4857 KO:K14944 UniGene:Rn.232418
IPI:IPI00556974 RefSeq:XP_001075031.1 RefSeq:XP_234098.2 SMR:D4AAF8
Ensembl:ENSRNOT00000050372 GeneID:298992 KEGG:rno:298992
NextBio:644625 Uniprot:D4AAF8
Length = 507
Score = 174 (66.3 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 31/47 (65%), Positives = 41/47 (87%)
Query: 11 DGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
DG +K+L+PSYAAG+IIGKGG+TI Q+QK+TG+ IK+SK+ DFYP
Sbjct: 47 DGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP 93
Score = 107 (42.7 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 19/42 (45%), Positives = 31/42 (73%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
++I VP GAI+GKGG+T+ + Q+ TG++I++SK +F P
Sbjct: 424 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVP 465
Score = 98 (39.6 bits), Expect = 0.00034, P = 0.00034
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 15 QIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKAND 54
Q+KI+VP+ AG IIGKGG T+ I + +G+ +++S+ D
Sbjct: 173 QVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPD 212
>UNIPROTKB|F1PUD6 [details] [associations]
symbol:NOVA2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 SMART:SM00322 GO:GO:0005634
GO:GO:0003723 GeneTree:ENSGT00650000093048 OMA:TPPEVVC
EMBL:AAEX03000869 EMBL:AAEX03000868 Ensembl:ENSCAFT00000006989
Uniprot:F1PUD6
Length = 502
Score = 171 (65.3 bits), Expect = 4.5e-12, P = 4.5e-12
Identities = 33/54 (61%), Positives = 44/54 (81%)
Query: 5 SPFIRAD-GVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
SP A+ G +K+L+PSYAAG+IIGKGG+TI Q+QK+TG+ IK+SK+ DFYP
Sbjct: 33 SPCAPAEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP 86
Score = 107 (42.7 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 19/42 (45%), Positives = 31/42 (73%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
++I VP GAI+GKGG+T+ + Q+ TG++I++SK +F P
Sbjct: 419 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLP 460
>UNIPROTKB|F1MS84 [details] [associations]
symbol:NOVA2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 SMART:SM00322 GO:GO:0005634
GO:GO:0003723 GeneTree:ENSGT00650000093048 OMA:TPPEVVC
EMBL:DAAA02047389 IPI:IPI00703570 Ensembl:ENSBTAT00000017485
Uniprot:F1MS84
Length = 464
Score = 170 (64.9 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 30/47 (63%), Positives = 41/47 (87%)
Query: 11 DGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
+G +K+L+PSYAAG+IIGKGG+TI Q+QK+TG+ IK+SK+ DFYP
Sbjct: 2 EGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP 48
Score = 107 (42.7 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 19/42 (45%), Positives = 31/42 (73%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
++I VP GAI+GKGG+T+ + Q+ TG++I++SK +F P
Sbjct: 381 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLP 422
>ZFIN|ZDB-GENE-080211-1 [details] [associations]
symbol:nova2 "neuro-oncological ventral antigen 2"
species:7955 "Danio rerio" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 ZFIN:ZDB-GENE-080211-1 GO:GO:0003723 eggNOG:NOG258094
HOGENOM:HOG000007833 HOVERGEN:HBG082048 EMBL:AY597523
IPI:IPI01006797 UniGene:Dr.77006 OrthoDB:EOG4D26RK
ArrayExpress:Q53B45 Uniprot:Q53B45
Length = 473
Score = 170 (64.9 bits), Expect = 5.2e-12, P = 5.2e-12
Identities = 30/47 (63%), Positives = 41/47 (87%)
Query: 11 DGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
+G +K+L+PSYAAG+IIGKGG+TI Q+QK+TG+ IK+SK+ DFYP
Sbjct: 60 EGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP 106
Score = 107 (42.7 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 19/42 (45%), Positives = 31/42 (73%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
++I VP GAI+GKGG+T+ + Q+ TG++I++SK +F P
Sbjct: 419 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVP 460
Score = 98 (39.6 bits), Expect = 0.00031, P = 0.00031
Identities = 20/58 (34%), Positives = 37/58 (63%)
Query: 8 IRADGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYPVYQ-VITL 64
+ D V Q K++VP+ AG IIGKGG T+ + + +G+ +++S+ D + + V+T+
Sbjct: 155 VNPDRVKQAKLVVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGINLQERVVTI 212
>UNIPROTKB|Q9UNW9 [details] [associations]
symbol:NOVA2 "RNA-binding protein Nova-2" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=NAS] [GO:0005634
"nucleus" evidence=IDA] InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 SMART:SM00322 EMBL:AF083898
GO:GO:0005634 GO:GO:0003723 eggNOG:NOG258094 HOGENOM:HOG000007833
HOVERGEN:HBG082048 KO:K14944 EMBL:U70477 EMBL:AC006540
IPI:IPI00156005 RefSeq:NP_002507.1 UniGene:Hs.375439 PDB:1DTJ
PDB:1EC6 PDBsum:1DTJ PDBsum:1EC6 ProteinModelPortal:Q9UNW9
SMR:Q9UNW9 STRING:Q9UNW9 PhosphoSite:Q9UNW9 DMDM:33516944
PRIDE:Q9UNW9 DNASU:4858 Ensembl:ENST00000263257 GeneID:4858
KEGG:hsa:4858 UCSC:uc002pdv.2 CTD:4858 GeneCards:GC19M046442
HGNC:HGNC:7887 HPA:HPA045607 MIM:601991 neXtProt:NX_Q9UNW9
PharmGKB:PA31689 InParanoid:Q9UNW9 OMA:TPPEVVC PhylomeDB:Q9UNW9
EvolutionaryTrace:Q9UNW9 GenomeRNAi:4858 NextBio:18718
ArrayExpress:Q9UNW9 Bgee:Q9UNW9 CleanEx:HS_NOVA2
Genevestigator:Q9UNW9 GermOnline:ENSG00000104967 Uniprot:Q9UNW9
Length = 492
Score = 170 (64.9 bits), Expect = 5.6e-12, P = 5.6e-12
Identities = 30/47 (63%), Positives = 41/47 (87%)
Query: 11 DGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
+G +K+L+PSYAAG+IIGKGG+TI Q+QK+TG+ IK+SK+ DFYP
Sbjct: 30 EGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP 76
Score = 107 (42.7 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 19/42 (45%), Positives = 31/42 (73%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
++I VP GAI+GKGG+T+ + Q+ TG++I++SK +F P
Sbjct: 409 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLP 450
>ZFIN|ZDB-GENE-060526-113 [details] [associations]
symbol:nova1 "neuro-oncological ventral antigen 1"
species:7955 "Danio rerio" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 ZFIN:ZDB-GENE-060526-113 GO:GO:0003723 EMBL:BX005407
GeneTree:ENSGT00650000093048 CTD:4857 eggNOG:NOG258094
HOGENOM:HOG000007833 HOVERGEN:HBG082048 KO:K14944 OMA:FRQNNTA
EMBL:BC171495 EMBL:BC171499 IPI:IPI00487894 RefSeq:NP_001038254.1
UniGene:Dr.103261 SMR:Q1LYC7 Ensembl:ENSDART00000097684
GeneID:555590 KEGG:dre:555590 InParanoid:Q1LYC7 OrthoDB:EOG40ZQZR
NextBio:20881056 Uniprot:Q1LYC7
Length = 495
Score = 170 (64.9 bits), Expect = 5.6e-12, P = 5.6e-12
Identities = 30/47 (63%), Positives = 41/47 (87%)
Query: 11 DGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
+G +K+L+PSYAAG+IIGKGG+TI Q+QK+TG+ IK+SK+ DFYP
Sbjct: 54 EGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP 100
Score = 107 (42.7 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 19/42 (45%), Positives = 31/42 (73%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
++I VP GAI+GKGG+T+ + Q+ TG++I++SK +F P
Sbjct: 412 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIP 453
Score = 94 (38.1 bits), Expect = 0.00089, P = 0.00089
Identities = 16/44 (36%), Positives = 30/44 (68%)
Query: 8 IRADGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSK 51
+ D + Q K++VP+ AG IIGKGG T+ + + +G+ +++S+
Sbjct: 149 VNPDRIKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQ 192
>RGD|1308032 [details] [associations]
symbol:Nova2 "neuro-oncological ventral antigen 2" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=ISO] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
RGD:1308032 GO:GO:0005634 GO:GO:0003723
GeneTree:ENSGT00650000093048 IPI:IPI00958388
Ensembl:ENSRNOT00000057965 Uniprot:F1M4H5
Length = 516
Score = 170 (64.9 bits), Expect = 6.1e-12, P = 6.1e-12
Identities = 30/47 (63%), Positives = 41/47 (87%)
Query: 11 DGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
+G +K+L+PSYAAG+IIGKGG+TI Q+QK+TG+ IK+SK+ DFYP
Sbjct: 54 EGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP 100
Score = 107 (42.7 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 19/42 (45%), Positives = 31/42 (73%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
++I VP GAI+GKGG+T+ + Q+ TG++I++SK +F P
Sbjct: 433 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLP 474
>FB|FBgn0261552 [details] [associations]
symbol:ps "pasilla" species:7227 "Drosophila melanogaster"
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEP] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 GO:GO:0005634 GO:GO:0003723
GO:GO:0000398 HSSP:Q9UNW9 FlyBase:FBgn0261552 EMBL:BT001623
ProteinModelPortal:Q8IGS7 PRIDE:Q8IGS7 InParanoid:Q8IGS7
ArrayExpress:Q8IGS7 Bgee:Q8IGS7 Uniprot:Q8IGS7
Length = 605
Score = 171 (65.3 bits), Expect = 6.3e-12, P = 6.3e-12
Identities = 31/42 (73%), Positives = 40/42 (95%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
+KILVP+ A+GAIIGKGGETIA +QKDTG+++KMSK++DFYP
Sbjct: 101 MKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYP 142
Score = 104 (41.7 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 24/51 (47%), Positives = 35/51 (68%)
Query: 15 QIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMS-KANDFYPVYQVITL 64
Q+KILVP+ AG IIGKGG I QI++++GS +++S K D + IT+
Sbjct: 193 QVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQKPTDVSLQERCITI 243
>UNIPROTKB|F1RM28 [details] [associations]
symbol:NOVA2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR004087 InterPro:IPR004088
Pfam:PF00013 PROSITE:PS50084 SMART:SM00322 GO:GO:0005634
GO:GO:0003723 GeneTree:ENSGT00650000093048 OMA:TPPEVVC
EMBL:FP102597 Ensembl:ENSSSCT00000003434 Uniprot:F1RM28
Length = 554
Score = 170 (64.9 bits), Expect = 6.9e-12, P = 6.9e-12
Identities = 30/47 (63%), Positives = 41/47 (87%)
Query: 11 DGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
+G +K+L+PSYAAG+IIGKGG+TI Q+QK+TG+ IK+SK+ DFYP
Sbjct: 92 EGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYP 138
Score = 107 (42.7 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 19/42 (45%), Positives = 31/42 (73%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
++I VP GAI+GKGG+T+ + Q+ TG++I++SK +F P
Sbjct: 471 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLP 512
>UNIPROTKB|P51513 [details] [associations]
symbol:NOVA1 "RNA-binding protein Nova-1" species:9606
"Homo sapiens" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0003723 "RNA binding" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0007626 "locomotory behavior"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0005634 GO:GO:0008380 GO:GO:0007268
GO:GO:0003729 GO:GO:0007626 GO:GO:0003723 EMBL:CH471078
GO:GO:0000398 EMBL:U04840 EMBL:AK289639 EMBL:AK291022 EMBL:BC075038
EMBL:BC075039 EMBL:Z70771 IPI:IPI00019244 IPI:IPI00221187
IPI:IPI00221188 IPI:IPI00816603 PIR:I38489 RefSeq:NP_002506.2
RefSeq:NP_006480.2 RefSeq:NP_006482.1 UniGene:Hs.31588 PDB:1DT4
PDB:2ANN PDB:2ANR PDBsum:1DT4 PDBsum:2ANN PDBsum:2ANR
ProteinModelPortal:P51513 SMR:P51513 IntAct:P51513
MINT:MINT-1381951 STRING:P51513 PhosphoSite:P51513 DMDM:1709303
PRIDE:P51513 Ensembl:ENST00000344429 Ensembl:ENST00000539517
GeneID:4857 KEGG:hsa:4857 UCSC:uc001wpy.3 UCSC:uc001wqa.3
UCSC:uc001wqb.3 CTD:4857 GeneCards:GC14M026915 H-InvDB:HIX0037755
HGNC:HGNC:7886 HPA:HPA004155 MIM:602157 neXtProt:NX_P51513
PharmGKB:PA31688 eggNOG:NOG258094 HOGENOM:HOG000007833
HOVERGEN:HBG082048 InParanoid:P51513 KO:K14944 OMA:FRQNNTA
ChiTaRS:NOVA1 EvolutionaryTrace:P51513 GenomeRNAi:4857
NextBio:18710 ArrayExpress:P51513 Bgee:P51513 CleanEx:HS_NOVA1
Genevestigator:P51513 GermOnline:ENSG00000139910 Uniprot:P51513
Length = 510
Score = 161 (61.7 bits), Expect = 5.6e-11, P = 5.6e-11
Identities = 31/50 (62%), Positives = 41/50 (82%)
Query: 11 DGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSK---ANDFYP 57
DG +K+L+PSYAAG+IIGKGG+TI Q+QK+TG+ IK+SK + DFYP
Sbjct: 47 DGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKLSKSKDFYP 96
Score = 107 (42.7 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 19/42 (45%), Positives = 31/42 (73%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
++I VP GAI+GKGG+T+ + Q+ TG++I++SK +F P
Sbjct: 427 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVP 468
Score = 97 (39.2 bits), Expect = 0.00044, P = 0.00044
Identities = 17/40 (42%), Positives = 29/40 (72%)
Query: 15 QIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKAND 54
Q+KI+VP+ AG IIGKGG T+ + + +G+ +++S+ D
Sbjct: 176 QVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPD 215
>WB|WBGene00013347 [details] [associations]
symbol:Y59A8B.10 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0003723 GeneTree:ENSGT00650000093048 eggNOG:NOG258094
KO:K14944 EMBL:AL132898 GeneID:180183 KEGG:cel:CELE_Y59A8B.10
CTD:180183 HSSP:P51513 RefSeq:NP_001256769.1
ProteinModelPortal:Q9GRY9 SMR:Q9GRY9 DIP:DIP-24651N IntAct:Q9GRY9
MINT:MINT-1109012 STRING:Q9GRY9 PaxDb:Q9GRY9 PRIDE:Q9GRY9
EnsemblMetazoa:Y59A8B.10a UCSC:Y59A8B.10 WormBase:Y59A8B.10a
HOGENOM:HOG000017831 InParanoid:Q9GRY9 OMA:LAKYNIM NextBio:908344
ArrayExpress:Q9GRY9 Uniprot:Q9GRY9
Length = 413
Score = 120 (47.3 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 22/42 (52%), Positives = 31/42 (73%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
IKIL+PS A GAIIGKGGE + ++ D +++MSK ++ YP
Sbjct: 44 IKILIPSNAVGAIIGKGGEAMRNLKNDNNCRVQMSKNSETYP 85
>UNIPROTKB|Q9GRY9 [details] [associations]
symbol:Y59A8B.10 "Protein Y59A8B.10, isoform a"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 GO:GO:0003723
GeneTree:ENSGT00650000093048 eggNOG:NOG258094 KO:K14944
EMBL:AL132898 GeneID:180183 KEGG:cel:CELE_Y59A8B.10 CTD:180183
HSSP:P51513 RefSeq:NP_001256769.1 ProteinModelPortal:Q9GRY9
SMR:Q9GRY9 DIP:DIP-24651N IntAct:Q9GRY9 MINT:MINT-1109012
STRING:Q9GRY9 PaxDb:Q9GRY9 PRIDE:Q9GRY9 EnsemblMetazoa:Y59A8B.10a
UCSC:Y59A8B.10 WormBase:Y59A8B.10a HOGENOM:HOG000017831
InParanoid:Q9GRY9 OMA:LAKYNIM NextBio:908344 ArrayExpress:Q9GRY9
Uniprot:Q9GRY9
Length = 413
Score = 120 (47.3 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 22/42 (52%), Positives = 31/42 (73%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
IKIL+PS A GAIIGKGGE + ++ D +++MSK ++ YP
Sbjct: 44 IKILIPSNAVGAIIGKGGEAMRNLKNDNNCRVQMSKNSETYP 85
>TAIR|locus:2184362 [details] [associations]
symbol:BTR1L "AT5G04430" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008380 "RNA splicing" evidence=NAS] [GO:0003727
"single-stranded RNA binding" evidence=IPI] [GO:0046719 "regulation
of viral protein levels in host cell" evidence=IMP]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 EMBL:CP002688 GO:GO:0008380 GO:GO:0003727 KO:K14944
IPI:IPI00533577 RefSeq:NP_850764.1 UniGene:At.4918
ProteinModelPortal:F4JW99 SMR:F4JW99 PRIDE:F4JW99
EnsemblPlants:AT5G04430.2 GeneID:830322 KEGG:ath:AT5G04430
OMA:RNIMEIT PhylomeDB:F4JW99 GO:GO:0046719 Uniprot:F4JW99
Length = 334
Score = 111 (44.1 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 20/48 (41%), Positives = 34/48 (70%)
Query: 10 ADGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
A+ I+ LV + AAG++IGKGG TI + Q +G++I++S+ +F+P
Sbjct: 31 AEKPTHIRFLVSNAAAGSVIGKGGSTITEFQAKSGARIQLSRNQEFFP 78
>UNIPROTKB|G8JLA5 [details] [associations]
symbol:NOVA1 "RNA-binding protein Nova-1" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0003723 HGNC:HGNC:7886 ChiTaRS:NOVA1
EMBL:AL079343 EMBL:AL132716 ProteinModelPortal:G8JLA5 SMR:G8JLA5
Ensembl:ENST00000347476 Bgee:G8JLA5 Uniprot:G8JLA5
Length = 109
Score = 103 (41.3 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 18/47 (38%), Positives = 32/47 (68%)
Query: 8 IRADGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKAND 54
+ D + Q+KI+VP+ AG IIGKGG T+ + + +G+ +++S+ D
Sbjct: 20 VNPDRIKQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPD 66
>UNIPROTKB|G3N2N4 [details] [associations]
symbol:NOVA1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003729 "mRNA binding" evidence=IEA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0003729 GO:GO:0000398 GeneTree:ENSGT00650000093048 KO:K14944
EMBL:DAAA02052552 EMBL:DAAA02052553 RefSeq:XP_001257255.3
Ensembl:ENSBTAT00000065126 GeneID:790874 KEGG:bta:790874
NextBio:20930383 Uniprot:G3N2N4
Length = 385
Score = 107 (42.7 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 19/42 (45%), Positives = 31/42 (73%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
++I VP GAI+GKGG+T+ + Q+ TG++I++SK +F P
Sbjct: 302 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVP 343
Score = 98 (39.6 bits), Expect = 0.00023, P = 0.00023
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 15 QIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKAND 54
Q+KI+VP+ AG IIGKGG T+ I + +G+ +++S+ D
Sbjct: 51 QVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPD 90
>UNIPROTKB|B7Z770 [details] [associations]
symbol:NOVA1 "RNA-binding protein Nova-1" species:9606
"Homo sapiens" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0003729 GO:GO:0000398 IPI:IPI00019244
UniGene:Hs.31588 HGNC:HGNC:7886 HOVERGEN:HBG082048 ChiTaRS:NOVA1
EMBL:AL079343 EMBL:AL132716 EMBL:AK301526 ProteinModelPortal:B7Z770
SMR:B7Z770 STRING:B7Z770 PRIDE:B7Z770 Ensembl:ENST00000267422
ArrayExpress:B7Z770 Bgee:B7Z770 Uniprot:B7Z770
Length = 385
Score = 107 (42.7 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 19/42 (45%), Positives = 31/42 (73%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
++I VP GAI+GKGG+T+ + Q+ TG++I++SK +F P
Sbjct: 302 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVP 343
Score = 97 (39.2 bits), Expect = 0.00029, P = 0.00029
Identities = 17/40 (42%), Positives = 29/40 (72%)
Query: 15 QIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKAND 54
Q+KI+VP+ AG IIGKGG T+ + + +G+ +++S+ D
Sbjct: 51 QVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPD 90
>UNIPROTKB|F1MBI6 [details] [associations]
symbol:NOVA1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0003723 GeneTree:ENSGT00650000093048 EMBL:DAAA02052552
EMBL:DAAA02052553 IPI:IPI01028075 Ensembl:ENSBTAT00000031237
Uniprot:F1MBI6
Length = 389
Score = 107 (42.7 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 19/42 (45%), Positives = 31/42 (73%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
++I VP GAI+GKGG+T+ + Q+ TG++I++SK +F P
Sbjct: 306 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVP 347
Score = 104 (41.7 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 8 IRADGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKAND 54
+ D + Q+KI+VP+ AG IIGKGG T+ I + +G+ +++S+ D
Sbjct: 48 VNPDRIKQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPD 94
>UNIPROTKB|F1NP94 [details] [associations]
symbol:NOVA1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
[GO:0003729 "mRNA binding" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0003729 GO:GO:0000398 GeneTree:ENSGT00650000093048
OMA:FRQNNTA EMBL:AADN02003296 EMBL:AADN02003297 EMBL:AADN02003298
EMBL:AADN02003299 EMBL:AADN02003300 EMBL:AADN02003301
EMBL:AADN02003302 EMBL:AADN02003303 EMBL:AADN02003304
EMBL:AADN02003305 EMBL:AADN02003306 EMBL:AADN02003307
EMBL:AADN02003308 EMBL:AADN02003309 EMBL:AADN02003310
EMBL:AADN02003311 EMBL:AADN02003312 EMBL:AADN02003313
EMBL:AADN02003314 EMBL:AADN02003315 IPI:IPI00584544
Ensembl:ENSGALT00000016013 ArrayExpress:F1NP94 Uniprot:F1NP94
Length = 413
Score = 107 (42.7 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 19/42 (45%), Positives = 31/42 (73%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
++I VP GAI+GKGG+T+ + Q+ TG++I++SK +F P
Sbjct: 330 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVP 371
Score = 98 (39.6 bits), Expect = 0.00026, P = 0.00026
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 15 QIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKAND 54
Q+KI+VP+ AG IIGKGG T+ I + +G+ +++S+ D
Sbjct: 79 QVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPD 118
>UNIPROTKB|F1SGT5 [details] [associations]
symbol:NOVA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003729 "mRNA binding" evidence=IEA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0003729 GO:GO:0000398 GeneTree:ENSGT00650000093048
OMA:FRQNNTA EMBL:CT826400 Ensembl:ENSSSCT00000031969 Uniprot:F1SGT5
Length = 417
Score = 107 (42.7 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 19/42 (45%), Positives = 31/42 (73%)
Query: 16 IKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYP 57
++I VP GAI+GKGG+T+ + Q+ TG++I++SK +F P
Sbjct: 334 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVP 375
Score = 98 (39.6 bits), Expect = 0.00026, P = 0.00026
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 15 QIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKAND 54
Q+KI+VP+ AG IIGKGG T+ I + +G+ +++S+ D
Sbjct: 83 QVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPD 122
>UNIPROTKB|F8VW64 [details] [associations]
symbol:NOVA1 "RNA-binding protein Nova-1" species:9606
"Homo sapiens" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0003729 GO:GO:0000398 HGNC:HGNC:7886
ChiTaRS:NOVA1 EMBL:AL079343 EMBL:AL132716 IPI:IPI01020950
ProteinModelPortal:F8VW64 SMR:F8VW64 Ensembl:ENST00000549146
ArrayExpress:F8VW64 Bgee:F8VW64 Uniprot:F8VW64
Length = 96
Score = 97 (39.2 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 17/40 (42%), Positives = 29/40 (72%)
Query: 15 QIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKAND 54
Q+KI+VP+ AG IIGKGG T+ + + +G+ +++S+ D
Sbjct: 51 QVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPD 90
>UNIPROTKB|J9P1I9 [details] [associations]
symbol:FUBP3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0003723 GeneTree:ENSGT00650000093048
EMBL:AAEX03006837 EMBL:AAEX03006838 Ensembl:ENSCAFT00000048747
Uniprot:J9P1I9
Length = 487
Score = 96 (38.9 bits), Expect = 0.00053, P = 0.00053
Identities = 21/40 (52%), Positives = 28/40 (70%)
Query: 11 DGVCQIK-ILVPSYAAGAIIGKGGETIAQIQKDTGSKIKM 49
DG I+ IL+P+ G +IGKGGETI Q+Q+ TG K+ M
Sbjct: 159 DGNSTIQEILIPASKVGLVIGKGGETIKQLQERTGVKMVM 198
>TAIR|locus:2043530 [details] [associations]
symbol:AT2G25970 "AT2G25970" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=ISS]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006606 "protein import into nucleus"
evidence=RCA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 GO:GO:0005829 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003723 EMBL:AC004747 EMBL:AC005395
eggNOG:NOG300923 KO:K13210 HSSP:Q9UNW9 EMBL:AY078954 EMBL:AK226845
IPI:IPI00540360 PIR:T02627 RefSeq:NP_180167.1 UniGene:At.21555
ProteinModelPortal:O82762 SMR:O82762 STRING:O82762 PaxDb:O82762
PRIDE:O82762 ProMEX:O82762 EnsemblPlants:AT2G25970.1 GeneID:817137
KEGG:ath:AT2G25970 TAIR:At2g25970 HOGENOM:HOG000242545
InParanoid:O82762 OMA:AANSTQD PhylomeDB:O82762
ProtClustDB:CLSN2913011 ArrayExpress:O82762 Genevestigator:O82762
Uniprot:O82762
Length = 632
Score = 97 (39.2 bits), Expect = 0.00058, P = 0.00058
Identities = 22/54 (40%), Positives = 32/54 (59%)
Query: 17 KILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDFYPVYQVITLFLLSRP 70
KI +P+ G IIGKGGETI +Q +G+KI++++ D P T+ L P
Sbjct: 137 KIDIPNMRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNCATRTVDLTGTP 190
>UNIPROTKB|F1PEW1 [details] [associations]
symbol:FUBP3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084
SMART:SM00322 GO:GO:0003723 GeneTree:ENSGT00650000093048
OMA:AAPHQNT EMBL:AAEX03006837 EMBL:AAEX03006838
Ensembl:ENSCAFT00000031728 Uniprot:F1PEW1
Length = 547
Score = 96 (38.9 bits), Expect = 0.00062, P = 0.00062
Identities = 21/40 (52%), Positives = 28/40 (70%)
Query: 11 DGVCQIK-ILVPSYAAGAIIGKGGETIAQIQKDTGSKIKM 49
DG I+ IL+P+ G +IGKGGETI Q+Q+ TG K+ M
Sbjct: 159 DGNSTIQEILIPASKVGLVIGKGGETIKQLQERTGVKMVM 198
>UNIPROTKB|F1NYJ3 [details] [associations]
symbol:FUBP3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
GO:GO:0003723 GeneTree:ENSGT00650000093048 EMBL:AADN02026565
EMBL:AADN02026566 EMBL:AADN02026567 EMBL:AADN02026568
EMBL:AADN02026569 EMBL:AADN02026570 IPI:IPI00819889
Ensembl:ENSGALT00000006277 ArrayExpress:F1NYJ3 Uniprot:F1NYJ3
Length = 508
Score = 95 (38.5 bits), Expect = 0.00072, P = 0.00072
Identities = 21/40 (52%), Positives = 28/40 (70%)
Query: 11 DGVCQIK-ILVPSYAAGAIIGKGGETIAQIQKDTGSKIKM 49
DG I+ IL+P+ G +IGKGGETI Q+Q+ TG K+ M
Sbjct: 148 DGNSTIQEILIPASKVGLVIGKGGETIKQLQERTGVKMIM 187
>UNIPROTKB|F1NGC0 [details] [associations]
symbol:FUBP3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 GO:GO:0005634 GO:GO:0005737
GO:GO:0045893 GO:GO:0006351 GO:GO:0003723
GeneTree:ENSGT00650000093048 OMA:AAPHQNT EMBL:AADN02026565
EMBL:AADN02026566 EMBL:AADN02026567 EMBL:AADN02026568
EMBL:AADN02026569 EMBL:AADN02026570 IPI:IPI00578263
Ensembl:ENSGALT00000039554 ArrayExpress:F1NGC0 Uniprot:F1NGC0
Length = 539
Score = 95 (38.5 bits), Expect = 0.00078, P = 0.00078
Identities = 21/40 (52%), Positives = 28/40 (70%)
Query: 11 DGVCQIK-ILVPSYAAGAIIGKGGETIAQIQKDTGSKIKM 49
DG I+ IL+P+ G +IGKGGETI Q+Q+ TG K+ M
Sbjct: 177 DGNSTIQEILIPASKVGLVIGKGGETIKQLQERTGVKMIM 216
>UNIPROTKB|F1S0X8 [details] [associations]
symbol:FUBP3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR004087 InterPro:IPR004088 Pfam:PF00013
PROSITE:PS50084 SMART:SM00322 GO:GO:0005634 GO:GO:0005737
GO:GO:0045893 GO:GO:0006351 GO:GO:0003723
GeneTree:ENSGT00650000093048 OMA:AAPHQNT EMBL:CU914779
Ensembl:ENSSSCT00000006271 Uniprot:F1S0X8
Length = 548
Score = 95 (38.5 bits), Expect = 0.00079, P = 0.00079
Identities = 20/40 (50%), Positives = 28/40 (70%)
Query: 11 DGVCQIK-ILVPSYAAGAIIGKGGETIAQIQKDTGSKIKM 49
DG I+ +L+P+ G +IGKGGETI Q+Q+ TG K+ M
Sbjct: 159 DGSSTIQELLIPASKVGLVIGKGGETIKQLQERTGVKMVM 198
>POMBASE|SPCC757.09c [details] [associations]
symbol:rnc1 "RNA-binding protein that suppresses
calcineurin deletion Rnc1" species:4896 "Schizosaccharomyces pombe"
[GO:0003729 "mRNA binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005829 "cytosol" evidence=IDA]
[GO:0043409 "negative regulation of MAPK cascade" evidence=IGI]
[GO:0048255 "mRNA stabilization" evidence=IMP] InterPro:IPR004087
InterPro:IPR004088 Pfam:PF00013 PROSITE:PS50084 SMART:SM00322
PomBase:SPCC757.09c GO:GO:0005829 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0003729 GO:GO:0048255 GO:GO:0043409
HSSP:Q91WJ8 OrthoDB:EOG4Z65XM eggNOG:NOG315872 PIR:T41600
RefSeq:NP_587684.1 ProteinModelPortal:O74919 STRING:O74919
PRIDE:O74919 EnsemblFungi:SPCC757.09c.1 GeneID:2539434
KEGG:spo:SPCC757.09c HOGENOM:HOG000184255 OMA:NCESIAY
NextBio:20800596 Uniprot:O74919
Length = 398
Score = 93 (37.8 bits), Expect = 0.00084, P = 0.00084
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 6 PFIRADGVCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSK 51
PF++ V Q I +P+ G IIG+GG I++I++ +GSKI ++K
Sbjct: 314 PFLQQPKVTQ-NISIPADMVGCIIGRGGSKISEIRRTSGSKISIAK 358
>FB|FBgn0262735 [details] [associations]
symbol:Imp "IGF-II mRNA-binding protein" species:7227
"Drosophila melanogaster" [GO:0003729 "mRNA binding" evidence=ISS]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0007399 "nervous
system development" evidence=IMP] [GO:0051124 "synaptic growth at
neuromuscular junction" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0071011 "precatalytic spliceosome"
evidence=IDA] [GO:0007283 "spermatogenesis" evidence=IEP]
InterPro:IPR000504 InterPro:IPR004087 InterPro:IPR004088
InterPro:IPR012677 Pfam:PF00013 Pfam:PF00076 PROSITE:PS50084
SMART:SM00322 GO:GO:0000166 EMBL:AE014298 Gene3D:3.30.70.330
GO:GO:0051124 GO:GO:0007283 GO:GO:0003723 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 CTD:32009 UniGene:Dm.3773 GeneID:32009
KEGG:dme:Dmel_CG1691 FlyBase:FBgn0262735 GenomeRNAi:32009
NextBio:776342 RefSeq:NP_001036268.2 ProteinModelPortal:Q0KHU2
SMR:Q0KHU2 STRING:Q0KHU2 PRIDE:Q0KHU2 UCSC:CG1691-RI
OrthoDB:EOG4RBP0X PhylomeDB:Q0KHU2 Bgee:Q0KHU2 Uniprot:Q0KHU2
Length = 588
Score = 95 (38.5 bits), Expect = 0.00087, P = 0.00087
Identities = 22/54 (40%), Positives = 34/54 (62%)
Query: 13 VCQIKILVPSYAAGAIIGKGGETIAQIQKDTGSKIKMSKANDF--YPVYQVITL 64
+C +KIL + G IIGK G TI +I +DT +KI +S ND + + ++IT+
Sbjct: 180 IC-LKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDINSFNLERIITV 232
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.138 0.395 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 78 78 0.00091 102 3 11 22 0.39 29
29 0.38 30
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 41
No. of states in DFA: 471 (50 KB)
Total size of DFA: 82 KB (2064 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 7.99u 0.07s 8.06t Elapsed: 00:00:13
Total cpu time: 7.99u 0.07s 8.06t Elapsed: 00:00:13
Start: Thu Aug 15 13:19:48 2013 End: Thu Aug 15 13:20:01 2013