Query         psy14681
Match_columns 394
No_of_seqs    195 out of 350
Neff          4.7 
Searched_HMMs 29240
Date          Fri Aug 16 17:59:59 2013
Command       hhsearch -i /work/01045/syshi/Psyhhblits/psy14681.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14681hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 3fga_B Serine/threonine-protei 100.0 1.6E-94 5.4E-99  729.8  13.1  282    6-394     1-354 (403)
  2 2npp_B PP2A, B subunit, serine 100.0 6.1E-93 2.1E-97  726.9   5.5  286    2-394    30-387 (449)
  3 2jak_A Serine/threonine-protei 100.0 6.7E-90 2.3E-94  694.0  14.0  279    2-387    42-392 (392)
  4 2jak_A Serine/threonine-protei  99.9 3.3E-24 1.1E-28  216.4   8.1  152   85-263   174-389 (392)
  5 3fga_B Serine/threonine-protei  99.9   6E-24 2.1E-28  215.1   9.7  153   84-263   128-344 (403)
  6 2npp_B PP2A, B subunit, serine  99.9 9.2E-24 3.1E-28  216.4   6.8  152   85-263   162-377 (449)
  7 3u0r_A Apoptosis inhibitor 5;   16.3 9.1E+02   0.031   25.1  15.2   90  113-215   101-199 (507)
  8 4b8b_A General negative regula  15.1 9.8E+02   0.034   25.4  11.0   28  113-140   468-495 (603)
  9 3zqo_A Terminase small subunit  14.5   1E+02  0.0035   23.7   2.6   33  245-283     4-36  (72)
 10 3d1b_A RNA-induced transcripti  11.7      60  0.0021   27.1   0.6   14  187-200    73-86  (124)

No 1  
>3fga_B Serine/threonine-protein phosphatase 2A 56 kDa RE subunit gamma isoform; PP2A, shugoshin, nucleus, phosphoprotein, hydrolase, iron, M metal-binding, methylation, protein phosphatase, cell cycle division; HET: 1ZN; 2.70A {Homo sapiens} PDB: 2iae_B* 2nym_B* 2nyl_B*
Probab=100.00  E-value=1.6e-94  Score=729.83  Aligned_cols=282  Identities=73%  Similarity=1.160  Sum_probs=269.9

Q ss_pred             ChHHHHHHHHHHHHhCCccccCCCCCCcC------ccc----------------chHhHHHHHHHHHhhhcCCCCCCCCC
Q psy14681          6 ALEERLEASDQFSRRNCLLFRGIPEADPD------KRE----------------TEEDCQALVMAFAVNLFRTLPPSSNP   63 (394)
Q Consensus         6 ~~~e~~~Lf~~Kl~~C~~ifDF~~~~~~d------Kr~----------------te~~~~~ii~Mis~NiFR~lPp~~~~   63 (394)
                      |++||++||++||++||++|||++||.+|      ||+                ||++|+++++|+++||||++||++++
T Consensus         1 ~~~e~~~lf~~Kl~~C~~ifDF~~d~~~d~~~Ke~Kr~~L~el~~~~~~~~~~lte~~~~~~~~Mi~~NiFR~lPp~~~~   80 (403)
T 3fga_B            1 PPADQEKLFIQKLRQCCVLFDFVSDPLSDLKWKEVKRAALSEMVEYITHNRNVITEPIYPEVVHMFAVNMFRTLPPSSNP   80 (403)
T ss_dssp             CCSHHHHHHHHHHHHTTCCCCSSSSTTTTHHHHHHHHHHHHHHHHHHHHSCSCCCTTHHHHHHHHHHHHHCCCCCCCSSC
T ss_pred             ChhHHHHHHHHHHHHhCCccCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhhCCCCCCCCCC
Confidence            68999999999999999999996589888      554                89999999999999999999999999


Q ss_pred             CCCCCCCCCCCcccccCCcchHHHHHHHHHHhhCCCCCchhhhhcCCHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhh
Q psy14681         64 NGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLDLFDSEDPRERDFLKTTLHRIYGKF  143 (394)
Q Consensus        64 ~~~~fdpeedEp~le~sWPHLqlVYe~llrfv~s~~~~~~~~k~~id~~fv~~Ll~lf~S~DpRER~~~k~~~~r~~~kf  143 (394)
                      +|.+||||||||++|+||||||+||++|+||++||+|++++||+|||++||++|+++|+|+|||||+++|+++|||||||
T Consensus        81 ~~~~~d~eedep~~e~sWpHLqlVYe~llrfi~s~~f~~~~~k~~id~~Fi~~Ll~lfdSeDprER~~LktiLhrIY~kf  160 (403)
T 3fga_B           81 TGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLELFDSEDPRERDFLKTTLHRIYGKF  160 (403)
T ss_dssp             CSTTCCGGGCCCCCCTTHHHHHHHHHHHHHHHHCTTCCHHHHTTTSCHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHC
T ss_pred             ccccCCccccccccccCcHHHHHHHHHHHHHHhccccChhhHHhhcCHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHhh
Confidence            88899999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhHHHHHHHHHHHHHhhhhhHHHhHHHHHHHhhhhhccccccCChhhhhhhHHHHHHHhhcChhHHhhhhhHHHHHHhh
Q psy14681        144 LGLRAYIRKQINNIFYRTIHGLIYNALKLFMEMNQKLFDEFAFPLPSQVMFLNELEEILDVIEPAEFQKVMVPLFHQIAK  223 (394)
Q Consensus       144 ~~~r~~iR~~i~~~f~~~i~~si~n~~~~pLe~~~~l~~~~~wP~~kev~fl~eleeil~~~~~~~f~~~~~pLf~~i~~  223 (394)
                      +++                                                                             
T Consensus       161 ~~~-----------------------------------------------------------------------------  163 (403)
T 3fga_B          161 LGL-----------------------------------------------------------------------------  163 (403)
T ss_dssp             HHH-----------------------------------------------------------------------------
T ss_pred             hhh-----------------------------------------------------------------------------
Confidence            998                                                                             


Q ss_pred             hhcccchhhhHHHhhhhcchhHHHHHHHhhhhhhhhcccccccccHHHHHHHHHHhhccCCCCchHHHHHHHHHHHHHHH
Q psy14681        224 CVSSSHFQTTLHRIYGKFLGLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLKDEHKFFLLKVLLRIF  303 (394)
Q Consensus       224 C~~s~~fqv~~~~~~~k~~~~r~~irk~~~~~~~~fiye~~~~~gi~ELLeil~sIi~gf~~plk~eh~~~l~~~lipmh  303 (394)
                                           |++||++|+++||+|||||++||||+|||||+||||||||.|||+||+.||.++|+|||
T Consensus       164 ---------------------R~~Irk~innif~~fiye~e~~~GIaeLLeilgsIinGfa~PLkeehk~fl~~vLlPLH  222 (403)
T 3fga_B          164 ---------------------RAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPLH  222 (403)
T ss_dssp             ---------------------HHHHHHHHHHHHHHHHHTTCCCTTHHHHHHHHHHHHHHCCSSCCHHHHHHHHHTTTGGG
T ss_pred             ---------------------HHHHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHcccCCCchHHHHHHHHHHHHHHH
Confidence                                 77777788888899999999999999999999999999999999999999999999999


Q ss_pred             HHh------------------------------hhhcCCCCCCCCCCCCCCCCCc---------------ccc-----cc
Q psy14681        304 AVN------------------------------LFRTLPPSSNPNGAEFDPEEDE---------------PTL-----EA  333 (394)
Q Consensus       304 ~~n------------------------------l~R~wP~~~~~k~~~f~~E~eE---------------pl~-----~~  333 (394)
                      +++                              ++|+||.++++|+++|++|.++               |+|     |+
T Consensus       223 k~~~~~~y~~qL~ycv~qf~eKDp~L~~~vi~~LLk~WP~tns~KevlFL~Ele~iLe~~~~~~f~~i~~~lf~~la~ci  302 (403)
T 3fga_B          223 KVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVKIMEPLFRQLAKCV  302 (403)
T ss_dssp             GSTTGGGTHHHHHHHHHHHHHHCGGGHHHHHHHHHHTCCSSCHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCcchhhHHHHHHHHHHHHHhCchhHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence            997                              9999999999999999999888               333     99


Q ss_pred             CChhhHHHHHHHHHHHHHHhhhhccchHHHHHHhhcccccchhhhHHHHhhhhcccCcccC
Q psy14681        334 AWPHLQLVYEFFLRYVAERALYYWNNEYFMNLITDNATVIVPIMFPALYRNSKTHWNKFLK  394 (394)
Q Consensus       334 swpHlQlVy~~lLr~VaerAl~~~~n~~i~~Li~~~~~~i~pi~~~~l~~~~~~HWn~~i~  394 (394)
                      +|+|+|         |||||+++|||+++++++++|+++|+|+|+|+||++|++|||++|+
T Consensus       303 ~S~hfq---------VAErAL~~wnNe~i~~li~~n~~~IlPii~p~L~~~~~~HWn~~v~  354 (403)
T 3fga_B          303 SSPHFQ---------VAERALYYWNNEYIMSLISDNAAKILPIMFPSLYRNSKTHWNKTIH  354 (403)
T ss_dssp             TCSCHH---------HHHHHHGGGGCHHHHHHHHTTHHHHHHHHHHHHHHTTSCCSCHHHH
T ss_pred             CCCCHH---------HHHHHHHHhccHHHHHHHHHhHHHHHHHHHHHHHHHHHHccCHHHH
Confidence            999999         9999999999999999999999999999999999999999999874


No 2  
>2npp_B PP2A, B subunit, serine/threonine-protein phosphatase 2A 56 kDa RE subunit gamma isoform; heat repeat, signaling protein, hydrolase-hydrolase inhibito; HET: 1ZN; 3.30A {Homo sapiens} SCOP: a.118.1.20
Probab=100.00  E-value=6.1e-93  Score=726.95  Aligned_cols=286  Identities=72%  Similarity=1.144  Sum_probs=265.4

Q ss_pred             CCCCChHHHHHHHHHHHHhCCccccCCCCCCcC------ccc----------------chHhHHHHHHHHHhhhcCCCCC
Q psy14681          2 HGKIALEERLEASDQFSRRNCLLFRGIPEADPD------KRE----------------TEEDCQALVMAFAVNLFRTLPP   59 (394)
Q Consensus         2 ~~~~~~~e~~~Lf~~Kl~~C~~ifDF~~~~~~d------Kr~----------------te~~~~~ii~Mis~NiFR~lPp   59 (394)
                      ++|+|++|+++||++||++||++|||.+||.+|      ||+                ||++|+++++||++||||++||
T Consensus        30 l~d~~~~e~~~lf~~Kl~~C~~ifDF~~dp~~d~~~Ke~Kr~~L~el~~~v~~~~~~lte~i~~~i~~Mi~~NiFR~lPp  109 (449)
T 2npp_B           30 IRDVPPADQEKLFIQKLRQCCVLFDFVSDPLSDLKWKEVKRAALSEMVEYITHNRNVITEPIYPEVVHMFAVNMFRTLPP  109 (449)
T ss_dssp             --------CCCCTTTHHHHHHHHHHHCCCCSSSCCCCCSHHHHHHHHHHHHHSSCCSCCCSSCCHHHHHHHHHHCCCCCC
T ss_pred             CCCCChHHHHHHHHHHHHHhCCeeCCCCCchhhhHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHhCCCCCC
Confidence            579999999999999999999999993388887      443                8899999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCcccccCCcchHHHHHHHHHHhhCCCCCchhhhhcCCHHHHHHHhhcCCCCCHHHHHHHHHHHHHH
Q psy14681         60 SSNPNGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLDLFDSEDPRERDFLKTTLHRI  139 (394)
Q Consensus        60 ~~~~~~~~fdpeedEp~le~sWPHLqlVYe~llrfv~s~~~~~~~~k~~id~~fv~~Ll~lf~S~DpRER~~~k~~~~r~  139 (394)
                      +++++|.+||||||||++|+||||||+||++|+||++||+|++++||+|||++||++|+++|+|+|||||+++|+++|||
T Consensus       110 ~~~~~~~~~d~eedep~~e~sWpHLqlVYe~llrfv~s~~f~~~~~k~~id~~Fi~~Ll~lfdSeDpRERd~LktiLhrI  189 (449)
T 2npp_B          110 SSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLELFDSEDPRERDFLKTTLHRI  189 (449)
T ss_dssp             CSSCCSSSSCGGGCCCCCCTTHHHHHHHHHHHHHHHTSTTCCSTTGGGTSCHHHHHHHHHTTTSSTHHHHHHHHHHHHHH
T ss_pred             CCCcccccCCCccccccccccchHHHHHHHHHHHHHHccCCChhhhhhhCCHHHHHHHHHHcCCCChHHHHHHHHHHHHH
Confidence            99998889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhHHHHHHHHHHHHHhhhhhHHHhHHHHHHHhhhhhccccccCChhhhhhhHHHHHHHhhcChhHHhhhhhHHHH
Q psy14681        140 YGKFLGLRAYIRKQINNIFYRTIHGLIYNALKLFMEMNQKLFDEFAFPLPSQVMFLNELEEILDVIEPAEFQKVMVPLFH  219 (394)
Q Consensus       140 ~~kf~~~r~~iR~~i~~~f~~~i~~si~n~~~~pLe~~~~l~~~~~wP~~kev~fl~eleeil~~~~~~~f~~~~~pLf~  219 (394)
                      ||||+++                                                                         
T Consensus       190 Y~Kf~~~-------------------------------------------------------------------------  196 (449)
T 2npp_B          190 YGKFLGL-------------------------------------------------------------------------  196 (449)
T ss_dssp             HHSCTTT-------------------------------------------------------------------------
T ss_pred             HHHHHHH-------------------------------------------------------------------------
Confidence            9999998                                                                         


Q ss_pred             HHhhhhcccchhhhHHHhhhhcchhHHHHHHHhhhhhhhhcccccccccHHHHHHHHHHhhccCCCCchHHHHHHHHHHH
Q psy14681        220 QIAKCVSSSHFQTTLHRIYGKFLGLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLKDEHKFFLLKVL  299 (394)
Q Consensus       220 ~i~~C~~s~~fqv~~~~~~~k~~~~r~~irk~~~~~~~~fiye~~~~~gi~ELLeil~sIi~gf~~plk~eh~~~l~~~l  299 (394)
                                               |++|||+|+++||+||||+++||||+|||||+||||||||.|||+||+.|+.++|
T Consensus       197 -------------------------R~~Irk~i~nif~~fi~e~e~~nGIaeLLeilgSIinGfa~PLKeehk~fl~~vL  251 (449)
T 2npp_B          197 -------------------------RAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVL  251 (449)
T ss_dssp             -------------------------HHHHHHHHHHHHHHHHHTCSCCSCHHHHHHHHHHHHSSCCSSCCHHHHHHHHHTT
T ss_pred             -------------------------HHHHHHHHHHHHHHHhcccCCCCCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHH
Confidence                                     7777778888889999999999999999999999999999999999999999999


Q ss_pred             HHHHHHh------------------------------hhhcCCCCCCCCCCCCCCCCCc---------------ccc---
Q psy14681        300 LRIFAVN------------------------------LFRTLPPSSNPNGAEFDPEEDE---------------PTL---  331 (394)
Q Consensus       300 ipmh~~n------------------------------l~R~wP~~~~~k~~~f~~E~eE---------------pl~---  331 (394)
                      +|||+++                              |+|+||.++++|+++|++|.+|               |+|   
T Consensus       252 lPLhk~~~l~~y~~qL~ycv~qf~eKDp~L~~~vi~~LLk~WP~tns~KevlFL~eleeile~~~~~ef~~i~~~lF~~l  331 (449)
T 2npp_B          252 LPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVKIMEPLFRQL  331 (449)
T ss_dssp             GGGGGSSCGGGTHHHHHHHHHHHHHHCGGGHHHHHHHHHHTCCSSCHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred             HHHHccchhHHhHHHHHHHHHHHHhcCcHhHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence            9999987                              9999999999999999999988               333   


Q ss_pred             --ccCChhhHHHHHHHHHHHHHHhhhhccchHHHHHHhhcccccchhhhHHHHhhhhcccCcccC
Q psy14681        332 --EAAWPHLQLVYEFFLRYVAERALYYWNNEYFMNLITDNATVIVPIMFPALYRNSKTHWNKFLK  394 (394)
Q Consensus       332 --~~swpHlQlVy~~lLr~VaerAl~~~~n~~i~~Li~~~~~~i~pi~~~~l~~~~~~HWn~~i~  394 (394)
                        |++|+|+|         |||||+++|+|+++++++++|+++|+|+|+|+||++|++|||++|+
T Consensus       332 a~ci~S~hfq---------VAErAL~~w~N~~i~~li~~n~~~IlPii~p~L~~~s~~HWn~~V~  387 (449)
T 2npp_B          332 AKCVSSPHFQ---------VAERALYYWNNEYIMSLISDNAAKILPIMFPSLYRNSKTHWNKTIH  387 (449)
T ss_dssp             HHHHTCSCHH---------HHHHHHGGGGCHHHHHHHHTTHHHHHHHHHHHHTSCTTCCSSTTHH
T ss_pred             HHHHcCCCHH---------HHHHHHHHHCCHHHHHHHHhchhhhHHhhHHHHHHHHHHhcCHHHH
Confidence              99999999         9999999999999999999999999999999999999999999874


No 3  
>2jak_A Serine/threonine-protein phosphatase 2A 56 kDa RE subunit gamma isoform; B56G, PP2A, PPP2R5C, phosphorylation; 2.60A {Homo sapiens} SCOP: a.118.1.20
Probab=100.00  E-value=6.7e-90  Score=694.01  Aligned_cols=279  Identities=73%  Similarity=1.139  Sum_probs=244.3

Q ss_pred             CCCCChHHHHHHHHHHHHhCCccccCCCCCCcC------ccc----------------chHhHHHHHHHHHhhhcCCCCC
Q psy14681          2 HGKIALEERLEASDQFSRRNCLLFRGIPEADPD------KRE----------------TEEDCQALVMAFAVNLFRTLPP   59 (394)
Q Consensus         2 ~~~~~~~e~~~Lf~~Kl~~C~~ifDF~~~~~~d------Kr~----------------te~~~~~ii~Mis~NiFR~lPp   59 (394)
                      ++|+|++|+++||++||++||++|||.+||.+|      ||+                ||++|+++++|+++||||++||
T Consensus        42 l~d~~~~e~~~lf~~Kl~~C~~ifDF~~dp~~d~~~Ke~Kr~~L~el~~~v~~~~~~lte~i~~~i~~Mi~~NiFR~lPp  121 (392)
T 2jak_A           42 IRDVPPADQEKLFIQKLRQCCVLFDFVSDPLSDLKWKEVKRAALSEMVEYITHNRNVITEPIYPEVVHMFAVNMFRTLPP  121 (392)
T ss_dssp             CCCCC-CSCSHHHHHHHHHTTCCCCCSSCSSSSHHHHHHHHHHHHHHHHHHTTCCSCCCTTHHHHHHHHHHHHHCSCCCC
T ss_pred             CCCCChHHHHHHHHHHHHHhCCeeCCCCCcchhhHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHhCCCCCC
Confidence            589999999999999999999999994489888      553                8999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCcccccCCcchHHHHHHHHHHhhCCCCCchhhhhcCCHHHHHHHhhcCCCCCHHHHHHHHHHHHHH
Q psy14681         60 SSNPNGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLDLFDSEDPRERDFLKTTLHRI  139 (394)
Q Consensus        60 ~~~~~~~~fdpeedEp~le~sWPHLqlVYe~llrfv~s~~~~~~~~k~~id~~fv~~Ll~lf~S~DpRER~~~k~~~~r~  139 (394)
                      +++++|.+||||||||++|+||||||+||++|+||++||+|++++||+|||++||++|+++|+|+|||||+++|+++|||
T Consensus       122 ~~~~~~~~~d~eedep~~e~sWpHLqlVYe~llrfv~s~~f~~~~~k~~id~~Fi~~Ll~lfdSeDpRERd~LktiLhrI  201 (392)
T 2jak_A          122 SSNPTGAEFDPEEDEPTLEAAWPHLQLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLELFDSEDPRERDFLKTTLHRI  201 (392)
T ss_dssp             ---------------CCCCTTHHHHHHHHHHHHHHHHCTTCCHHHHTTTSCHHHHHHHHHHTTCSCHHHHHHHHHHHHHH
T ss_pred             CCCcccccCCccccccccccCChhHHHHHHHHHHHHHccCCChhhhhhhCCHHHHHHHHHHcCCCChHHHHHHHHHHHHH
Confidence            99998889999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhhHHHHHHHHHHHHHhhhhhHHHhHHHHHHHhhhhhccccccCChhhhhhhHHHHHHHhhcChhHHhhhhhHHHH
Q psy14681        140 YGKFLGLRAYIRKQINNIFYRTIHGLIYNALKLFMEMNQKLFDEFAFPLPSQVMFLNELEEILDVIEPAEFQKVMVPLFH  219 (394)
Q Consensus       140 ~~kf~~~r~~iR~~i~~~f~~~i~~si~n~~~~pLe~~~~l~~~~~wP~~kev~fl~eleeil~~~~~~~f~~~~~pLf~  219 (394)
                      ||||+++                                                                         
T Consensus       202 Y~Kf~~~-------------------------------------------------------------------------  208 (392)
T 2jak_A          202 YGKFLGL-------------------------------------------------------------------------  208 (392)
T ss_dssp             HHHCGGG-------------------------------------------------------------------------
T ss_pred             HHHHHHH-------------------------------------------------------------------------
Confidence            9999998                                                                         


Q ss_pred             HHhhhhcccchhhhHHHhhhhcchhHHHHHHHhhhhhhhhcccccccccHHHHHHHHHHhhccCCCCchHHHHHHHHHHH
Q psy14681        220 QIAKCVSSSHFQTTLHRIYGKFLGLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLKDEHKFFLLKVL  299 (394)
Q Consensus       220 ~i~~C~~s~~fqv~~~~~~~k~~~~r~~irk~~~~~~~~fiye~~~~~gi~ELLeil~sIi~gf~~plk~eh~~~l~~~l  299 (394)
                                               |++|||+|+++||+||||+++||||+|||||+||||||||.|||+||+.|+.++|
T Consensus       209 -------------------------R~~Irk~i~nif~~fiye~e~~~GIaeLLeilgsIIngfa~PLKeehk~Fl~~vL  263 (392)
T 2jak_A          209 -------------------------RAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVL  263 (392)
T ss_dssp             -------------------------HHHHHHHHHHHHHHHHTSSCCCSCHHHHHHHHHHHHHTCCSSCCHHHHHHHHHTT
T ss_pred             -------------------------HHHHHHHHHHHHHHHhhccCCCCCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHh
Confidence                                     7777778888889999999999999999999999999999999999999999999


Q ss_pred             HHHHHHh------------------------------hhhcCCCCCCCCCCCCCCCCCc---------------ccc---
Q psy14681        300 LRIFAVN------------------------------LFRTLPPSSNPNGAEFDPEEDE---------------PTL---  331 (394)
Q Consensus       300 ipmh~~n------------------------------l~R~wP~~~~~k~~~f~~E~eE---------------pl~---  331 (394)
                      +|||+++                              ++|+||.++++||++|++|.+|               |+|   
T Consensus       264 lPLhk~~~l~~y~~qL~ycv~qf~eKDp~L~~~vi~~LLk~WP~tns~KevlFL~eleeiLe~~~~~~f~~i~~~lF~~l  343 (392)
T 2jak_A          264 LPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNELEEILDVIEPSEFVKIMEPLFRQL  343 (392)
T ss_dssp             GGGGTSGGGGGTHHHHHHHHHHHHHHCGGGHHHHHHHHHHSSCSSCCTTHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHH
T ss_pred             HhhccCCcHHHhHHHHHHHHHHHHhcCchhHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence            9999987                              9999999999999999999999               333   


Q ss_pred             --ccCChhhHHHHHHHHHHHHHHhhhhccchHHHHHHhhcccccchhhhHHHHhhhhc
Q psy14681        332 --EAAWPHLQLVYEFFLRYVAERALYYWNNEYFMNLITDNATVIVPIMFPALYRNSKT  387 (394)
Q Consensus       332 --~~swpHlQlVy~~lLr~VaerAl~~~~n~~i~~Li~~~~~~i~pi~~~~l~~~~~~  387 (394)
                        |++|+|+|         |||||+++|||+++++++++|+++|+|+|+|+||++|++
T Consensus       344 a~ci~S~hfq---------VAErAL~~wnNe~i~~li~~n~~~ilPii~~~L~~~s~~  392 (392)
T 2jak_A          344 AKCVSSPHFQ---------VAERALYYWNNEYIMSLISDNAAKILPIMFPSLYRNSKT  392 (392)
T ss_dssp             HHHHTCSSHH---------HHHHHHGGGGCHHHHHHHHHTHHHHTTTSCC--------
T ss_pred             HHHHcCCcHH---------HHHHHHHHhCcHHHHHHHHhhhccchhhhhHHHHHHhcC
Confidence              99999999         999999999999999999999999999999999999985


No 4  
>2jak_A Serine/threonine-protein phosphatase 2A 56 kDa RE subunit gamma isoform; B56G, PP2A, PPP2R5C, phosphorylation; 2.60A {Homo sapiens} SCOP: a.118.1.20
Probab=99.90  E-value=3.3e-24  Score=216.40  Aligned_cols=152  Identities=45%  Similarity=0.695  Sum_probs=128.5

Q ss_pred             HHHHHHHHHHhhCCCCCchhhhhcCCHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhhh--
Q psy14681         85 QLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLDLFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINNIFYRTI--  162 (394)
Q Consensus        85 qlVYe~llrfv~s~~~~~~~~k~~id~~fv~~Ll~lf~S~DpRER~~~k~~~~r~~~kf~~~r~~iR~~i~~~f~~~i--  162 (394)
                      +.|..++.. ..|+|  ++      .++++...+-         |.|+|.+-+|.+         ||++|||+|++||  
T Consensus       174 ~Fi~~Ll~l-fdSeD--pR------ERd~LktiLh---------rIY~Kf~~~R~~---------Irk~i~nif~~fiye  226 (392)
T 2jak_A          174 KFVLQLLEL-FDSED--PR------ERDFLKTTLH---------RIYGKFLGLRAY---------IRKQINNIFYRFIYE  226 (392)
T ss_dssp             HHHHHHHHH-TTCSC--HH------HHHHHHHHHH---------HHHHHCGGGHHH---------HHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHH-cCCCC--hH------HHHHHHHHHH---------HHHHHHHHHHHH---------HHHHHHHHHHHHhhc
Confidence            677776654 55666  33      2467888887         999999999999         9999999999996  


Q ss_pred             -------------hhHHHhHHHHHHHhhhhhccc-c-----------------------------------------ccC
Q psy14681        163 -------------HGLIYNALKLFMEMNQKLFDE-F-----------------------------------------AFP  187 (394)
Q Consensus       163 -------------~~si~n~~~~pLe~~~~l~~~-~-----------------------------------------~wP  187 (394)
                                   +||||||||+||+++|+.+.. +                                         .||
T Consensus       227 ~e~~~GIaeLLeilgsIIngfa~PLKeehk~Fl~~vLlPLhk~~~l~~y~~qL~ycv~qf~eKDp~L~~~vi~~LLk~WP  306 (392)
T 2jak_A          227 TEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWP  306 (392)
T ss_dssp             SCCCSCHHHHHHHHHHHHHTCCSSCCHHHHHHHHHTTGGGGTSGGGGGTHHHHHHHHHHHHHHCGGGHHHHHHHHHHSSC
T ss_pred             cCCCCCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHhHhhccCCcHHHhHHHHHHHHHHHHhcCchhHHHHHHHHHHhCC
Confidence                         799999999999888766532 1                                         299


Q ss_pred             C---hhhhhhhHHHHHHHhhcChhHHhhhhhHHHHHHhhhhcccchhhhHHHhh----hhcchhHHHHHHHhhhhhhhhc
Q psy14681        188 L---PSQVMFLNELEEILDVIEPAEFQKVMVPLFHQIAKCVSSSHFQTTLHRIY----GKFLGLRAYIRKQINNIFYRFI  260 (394)
Q Consensus       188 ~---~kev~fl~eleeil~~~~~~~f~~~~~pLf~~i~~C~~s~~fqv~~~~~~----~k~~~~r~~irk~~~~~~~~fi  260 (394)
                      .   +||||||+|||+|||++++++|++++.|+|+|+++|++|+||||||++++    .+++++-+..++.|.+++++-+
T Consensus       307 ~tns~KevlFL~eleeiLe~~~~~~f~~i~~~lF~~la~ci~S~hfqVAErAL~~wnNe~i~~li~~n~~~ilPii~~~L  386 (392)
T 2jak_A          307 KTHSPKEVMFLNELEEILDVIEPSEFVKIMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAKILPIMFPSL  386 (392)
T ss_dssp             SSCCTTHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHTCSSHHHHHHHHGGGGCHHHHHHHHHTHHHHTTTSCC--
T ss_pred             CCCchHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHhCcHHHHHHHHhhhccchhhhhHHH
Confidence            6   89999999999999999999999999999999999999999999999999    4888888888899999999988


Q ss_pred             ccc
Q psy14681        261 YET  263 (394)
Q Consensus       261 ye~  263 (394)
                      |++
T Consensus       387 ~~~  389 (392)
T 2jak_A          387 YRN  389 (392)
T ss_dssp             ---
T ss_pred             HHH
Confidence            875


No 5  
>3fga_B Serine/threonine-protein phosphatase 2A 56 kDa RE subunit gamma isoform; PP2A, shugoshin, nucleus, phosphoprotein, hydrolase, iron, M metal-binding, methylation, protein phosphatase, cell cycle division; HET: 1ZN; 2.70A {Homo sapiens} PDB: 2iae_B* 2nym_B* 2nyl_B*
Probab=99.89  E-value=6e-24  Score=215.12  Aligned_cols=153  Identities=44%  Similarity=0.704  Sum_probs=132.5

Q ss_pred             hHHHHHHHHHHhhCCCCCchhhhhcCCHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhhh-
Q psy14681         84 LQLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLDLFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINNIFYRTI-  162 (394)
Q Consensus        84 LqlVYe~llrfv~s~~~~~~~~k~~id~~fv~~Ll~lf~S~DpRER~~~k~~~~r~~~kf~~~r~~iR~~i~~~f~~~i-  162 (394)
                      -+.|..++ ....|+|  ++      .++++..++-         |.|+|.+-+|.|         ||++|||+||+|| 
T Consensus       128 ~~Fi~~Ll-~lfdSeD--pr------ER~~LktiLh---------rIY~kf~~~R~~---------Irk~innif~~fiy  180 (403)
T 3fga_B          128 QKFVLQLL-ELFDSED--PR------ERDFLKTTLH---------RIYGKFLGLRAY---------IRKQINNIFYRFIY  180 (403)
T ss_dssp             HHHHHHHH-HGGGCSC--HH------HHHHHHHHHH---------HHHHHCHHHHHH---------HHHHHHHHHHHHHH
T ss_pred             HHHHHHHH-HHcCCCC--hH------HHHHHHHHHH---------HHHHhhhhhHHH---------HHHHHHHHHHHHhc
Confidence            46777765 4667777  44      3467888888         999999999999         9999999999995 


Q ss_pred             --------------hhHHHhHHHHHHHhhhhhccc-c-----------------------------------------cc
Q psy14681        163 --------------HGLIYNALKLFMEMNQKLFDE-F-----------------------------------------AF  186 (394)
Q Consensus       163 --------------~~si~n~~~~pLe~~~~l~~~-~-----------------------------------------~w  186 (394)
                                    +||||||||+||+++|+.+.. +                                         .|
T Consensus       181 e~e~~~GIaeLLeilgsIinGfa~PLkeehk~fl~~vLlPLHk~~~~~~y~~qL~ycv~qf~eKDp~L~~~vi~~LLk~W  260 (403)
T 3fga_B          181 ETEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYW  260 (403)
T ss_dssp             TTCCCTTHHHHHHHHHHHHHHCCSSCCHHHHHHHHHTTTGGGGSTTGGGTHHHHHHHHHHHHHHCGGGHHHHHHHHHHTC
T ss_pred             CcccCCCHHHHHHHHHHHHcccCCCchHHHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHhCchhHHHHHHHHHHhC
Confidence                          799999999999888866532 1                                         19


Q ss_pred             CC---hhhhhhhHHHHHHHhhcChhHHhhhhhHHHHHHhhhhcccchhhhHHHhh----hhcchhHHHHHHHhhhhhhhh
Q psy14681        187 PL---PSQVMFLNELEEILDVIEPAEFQKVMVPLFHQIAKCVSSSHFQTTLHRIY----GKFLGLRAYIRKQINNIFYRF  259 (394)
Q Consensus       187 P~---~kev~fl~eleeil~~~~~~~f~~~~~pLf~~i~~C~~s~~fqv~~~~~~----~k~~~~r~~irk~~~~~~~~f  259 (394)
                      |.   +||||||+|+|+||+++++.+|+++++|+|+++++|++|+||||||++++    .+++++-+..++.+.+++++-
T Consensus       261 P~tns~KevlFL~Ele~iLe~~~~~~f~~i~~~lf~~la~ci~S~hfqVAErAL~~wnNe~i~~li~~n~~~IlPii~p~  340 (403)
T 3fga_B          261 PKTHSPKEVMFLNELEEILDVIEPSEFVKIMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAKILPIMFPS  340 (403)
T ss_dssp             CSSCHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHTCSCHHHHHHHHGGGGCHHHHHHHHTTHHHHHHHHHHH
T ss_pred             CCCCcHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHhccHHHHHHHHHhHHHHHHHHHHH
Confidence            96   89999999999999999999999999999999999999999999999998    477777677788899999999


Q ss_pred             cccc
Q psy14681        260 IYET  263 (394)
Q Consensus       260 iye~  263 (394)
                      +|++
T Consensus       341 L~~~  344 (403)
T 3fga_B          341 LYRN  344 (403)
T ss_dssp             HHHT
T ss_pred             HHHH
Confidence            8885


No 6  
>2npp_B PP2A, B subunit, serine/threonine-protein phosphatase 2A 56 kDa RE subunit gamma isoform; heat repeat, signaling protein, hydrolase-hydrolase inhibito; HET: 1ZN; 3.30A {Homo sapiens} SCOP: a.118.1.20
Probab=99.88  E-value=9.2e-24  Score=216.38  Aligned_cols=152  Identities=45%  Similarity=0.705  Sum_probs=130.5

Q ss_pred             HHHHHHHHHHhhCCCCCchhhhhcCCHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhhh--
Q psy14681         85 QLVYEFFLRFLESPDFQPNIAKKYIDQKFVLQLLDLFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINNIFYRTI--  162 (394)
Q Consensus        85 qlVYe~llrfv~s~~~~~~~~k~~id~~fv~~Ll~lf~S~DpRER~~~k~~~~r~~~kf~~~r~~iR~~i~~~f~~~i--  162 (394)
                      +.|..++- ...|+|  ++      ..+++...+-         |.|+|.+-+|.+         ||++|||+||+||  
T Consensus       162 ~Fi~~Ll~-lfdSeD--pR------ERd~LktiLh---------rIY~Kf~~~R~~---------Irk~i~nif~~fi~e  214 (449)
T 2npp_B          162 KFVLQLLE-LFDSED--PR------ERDFLKTTLH---------RIYGKFLGLRAY---------IRKQINNIFYRFIYE  214 (449)
T ss_dssp             HHHHHHHH-TTTSST--HH------HHHHHHHHHH---------HHHHSCTTTHHH---------HHHHHHHHHHHHHHT
T ss_pred             HHHHHHHH-HcCCCC--hH------HHHHHHHHHH---------HHHHHHHHHHHH---------HHHHHHHHHHHHhcc
Confidence            67777655 455665  33      3467888887         999999999999         9999999999996  


Q ss_pred             -------------hhHHHhHHHHHHHhhhhhccc-c-----------------------------------------ccC
Q psy14681        163 -------------HGLIYNALKLFMEMNQKLFDE-F-----------------------------------------AFP  187 (394)
Q Consensus       163 -------------~~si~n~~~~pLe~~~~l~~~-~-----------------------------------------~wP  187 (394)
                                   +||||||||+||+++|+.+.. +                                         .||
T Consensus       215 ~e~~nGIaeLLeilgSIinGfa~PLKeehk~fl~~vLlPLhk~~~l~~y~~qL~ycv~qf~eKDp~L~~~vi~~LLk~WP  294 (449)
T 2npp_B          215 TEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWP  294 (449)
T ss_dssp             CSCCSCHHHHHHHHHHHHSSCCSSCCHHHHHHHHHTTGGGGGSSCGGGTHHHHHHHHHHHHHHCGGGHHHHHHHHHHTCC
T ss_pred             cCCCCCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHHccchhHHhHHHHHHHHHHHHhcCcHhHHHHHHHHHHhCC
Confidence                         799999999999888865532 1                                         199


Q ss_pred             C---hhhhhhhHHHHHHHhhcChhHHhhhhhHHHHHHhhhhcccchhhhHHHhh----hhcchhHHHHHHHhhhhhhhhc
Q psy14681        188 L---PSQVMFLNELEEILDVIEPAEFQKVMVPLFHQIAKCVSSSHFQTTLHRIY----GKFLGLRAYIRKQINNIFYRFI  260 (394)
Q Consensus       188 ~---~kev~fl~eleeil~~~~~~~f~~~~~pLf~~i~~C~~s~~fqv~~~~~~----~k~~~~r~~irk~~~~~~~~fi  260 (394)
                      .   +||||||||||+|||++++.+|++++.|+|+++++|++|+||||||++++    .+++++-+..++.|.+++++-+
T Consensus       295 ~tns~KevlFL~eleeile~~~~~ef~~i~~~lF~~la~ci~S~hfqVAErAL~~w~N~~i~~li~~n~~~IlPii~p~L  374 (449)
T 2npp_B          295 KTHSPKEVMFLNELEEILDVIEPSEFVKIMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAKILPIMFPSL  374 (449)
T ss_dssp             SSCHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHTCSCHHHHHHHHGGGGCHHHHHHHHTTHHHHHHHHHHHH
T ss_pred             CCCchHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHCCHHHHHHHHhchhhhHHhhHHHH
Confidence            7   89999999999999999999999999999999999999999999999998    4777776667888999999999


Q ss_pred             ccc
Q psy14681        261 YET  263 (394)
Q Consensus       261 ye~  263 (394)
                      |++
T Consensus       375 ~~~  377 (449)
T 2npp_B          375 YRN  377 (449)
T ss_dssp             TSC
T ss_pred             HHH
Confidence            885


No 7  
>3u0r_A Apoptosis inhibitor 5; heat repeat, armadillo repeat, lysine acetylation; 2.50A {Homo sapiens} PDB: 3v6a_A
Probab=16.29  E-value=9.1e+02  Score=25.09  Aligned_cols=90  Identities=18%  Similarity=0.289  Sum_probs=48.8

Q ss_pred             HHHHHhhcCCCCCHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHhhhhhHHHhHHHHHHHhh--hhhccccccC---
Q psy14681        113 FVLQLLDLFDSEDPRERDFLKTTLHRIYGKFLGLRAYIRKQINNIFYRTIHGLIYNALKLFMEMN--QKLFDEFAFP---  187 (394)
Q Consensus       113 fv~~Ll~lf~S~DpRER~~~k~~~~r~~~kf~~~r~~iR~~i~~~f~~~i~~si~n~~~~pLe~~--~~l~~~~~wP---  187 (394)
                      .+-=|..++.++|+.|+...+..+.-++.-=      -.-.++.+|.+...|     = -.+++.  .-+...+ -|   
T Consensus       101 iaDvL~QlLqtdd~~E~~~V~~sL~sllk~D------pk~tl~~lf~~i~~~-----~-e~~Rer~lkFi~~kl-~~l~~  167 (507)
T 3u0r_A          101 VADILTQLLQTDDSAEFNLVNNALLSIFKMD------AKGTLGGLFSQILQG-----E-DIVRERAIKFLSTKL-KTLPD  167 (507)
T ss_dssp             HHHHHHHHTTCCCHHHHHHHHHHHHHHHHHC------HHHHHHHHHHHHHHS-----C-HHHHHHHHHHHHHHG-GGSCT
T ss_pred             HHHHHHHHHhccchHHHHHHHHHHHHHHhcC------hHHHHHHHHHHHccc-----c-hHHHHHHHHHHHHHH-hhcch
Confidence            3333566788999999999999887776210      011122222222211     0 011111  0011111 11   


Q ss_pred             --Chh--hhhhhHHHHHHHhhcChhHHhhhhh
Q psy14681        188 --LPS--QVMFLNELEEILDVIEPAEFQKVMV  215 (394)
Q Consensus       188 --~~k--ev~fl~eleeil~~~~~~~f~~~~~  215 (394)
                        +.+  |..+..|+..+|+-..-+||.-+|.
T Consensus       168 ~~l~~E~E~~i~~~ikK~L~DVT~~EF~L~m~  199 (507)
T 3u0r_A          168 EVLTKEVEELILTESKKVLEDVTGEEFVLFMK  199 (507)
T ss_dssp             TTSCHHHHHHHHHHHHHHTTSCCHHHHHHHHH
T ss_pred             hhccHHHHHHHHHHHHHHhccccHHHHHHHHH
Confidence              133  5568888889999999999988873


No 8  
>4b8b_A General negative regulator of transcription subun; 2.80A {Saccharomyces cerevisiae S288C}
Probab=15.13  E-value=9.8e+02  Score=25.41  Aligned_cols=28  Identities=25%  Similarity=0.400  Sum_probs=22.5

Q ss_pred             HHHHHhhcCCCCCHHHHHHHHHHHHHHh
Q psy14681        113 FVLQLLDLFDSEDPRERDFLKTTLHRIY  140 (394)
Q Consensus       113 fv~~Ll~lf~S~DpRER~~~k~~~~r~~  140 (394)
                      +|..|-..=+|.|+||++...-|+|.++
T Consensus       468 iV~~L~~~K~S~~~rdqdvFaCMIh~LF  495 (603)
T 4b8b_A          468 VIELLRRLRDSDLPRDQEVFTCITHAVI  495 (603)
T ss_dssp             HHHHHHHHHTCCSHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhhcCCChhHHHHHHHHHHHHH
Confidence            4444444558999999999999999998


No 9  
>3zqo_A Terminase small subunit; DNA-binding protein, molecular motor, DNA packaging; 1.68A {Bacillus phage SF6} PDB: 3zqn_A 3zqm_A
Probab=14.47  E-value=1e+02  Score=23.72  Aligned_cols=33  Identities=27%  Similarity=0.256  Sum_probs=18.1

Q ss_pred             HHHHHHHhhhhhhhhcccccccccHHHHHHHHHHhhccC
Q psy14681        245 RAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGF  283 (394)
Q Consensus       245 r~~irk~~~~~~~~fiye~~~~~gi~ELLeil~sIi~gf  283 (394)
                      .+||.+.+..+      +.++-....|.|++|++|..|=
T Consensus         4 k~YI~erm~ei------~~~~Ia~~~EvLe~LT~iaRGe   36 (72)
T 3zqo_A            4 MARIDARLKEI------NEKKILQANEVLEHLTRIALGQ   36 (72)
T ss_dssp             -----------------CCCCCCCHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHH------HHhccCCHHHHHHHHHHHHcCC
Confidence            45666666554      3555677899999999999984


No 10 
>3d1b_A RNA-induced transcriptional silencing complex protein TAS3; all alpha motif, RITS complex, immunoglobulin fold, cell cycle; 1.70A {Schizosaccharomyces pombe} PDB: 3d1d_A
Probab=11.73  E-value=60  Score=27.13  Aligned_cols=14  Identities=64%  Similarity=1.184  Sum_probs=12.0

Q ss_pred             CChhhhhhhHHHHH
Q psy14681        187 PLPSQVMFLNELEE  200 (394)
Q Consensus       187 P~~kev~fl~elee  200 (394)
                      |++.|.|||.|||.
T Consensus        73 p~~~ql~fls~lek   86 (124)
T 3d1b_A           73 PLPEQLMFLSNLEK   86 (124)
T ss_dssp             CHHHHHHHHHHHTT
T ss_pred             cChHHHHHHHHHHh
Confidence            55899999999984


Done!